Trad_1729 b44d535231da519cdf15e4616d7af6cd 425 Gene3D G3DSA:3.40.190.10 47 345 1.4E-77 T 15-10-2018 Trad_1729 b44d535231da519cdf15e4616d7af6cd 425 SUPERFAMILY SSF53850 29 415 5.0E-66 T 15-10-2018 Trad_1729 b44d535231da519cdf15e4616d7af6cd 425 Pfam PF01547 Bacterial extracellular solute-binding protein 39 322 5.1E-36 T 15-10-2018 IPR006059 Bacterial extracellular solute-binding protein Trad_1729 b44d535231da519cdf15e4616d7af6cd 425 Gene3D G3DSA:3.40.190.10 141 398 1.4E-77 T 15-10-2018 Trad_0509 cd6ab4d0f6d0f9765cc6a4ecf4074fa6 276 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 11 88 1.8E-24 T 15-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 Trad_0509 cd6ab4d0f6d0f9765cc6a4ecf4074fa6 276 Gene3D G3DSA:3.40.50.10860 7 260 5.2E-85 T 15-10-2018 Trad_0509 cd6ab4d0f6d0f9765cc6a4ecf4074fa6 276 Gene3D G3DSA:3.40.50.720 100 240 5.2E-85 T 15-10-2018 Trad_0509 cd6ab4d0f6d0f9765cc6a4ecf4074fa6 276 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 118 192 4.8E-9 T 15-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase Trad_0509 cd6ab4d0f6d0f9765cc6a4ecf4074fa6 276 SUPERFAMILY SSF51735 101 273 1.21E-39 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_0509 cd6ab4d0f6d0f9765cc6a4ecf4074fa6 276 SUPERFAMILY SSF53223 3 100 1.73E-28 T 15-10-2018 Trad_0509 cd6ab4d0f6d0f9765cc6a4ecf4074fa6 276 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 2 272 31.682 T 15-10-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 Trad_0509 cd6ab4d0f6d0f9765cc6a4ecf4074fa6 276 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 14 274 1.7E-66 T 15-10-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 Trad_0286 adba9a3aff6b3e430f0c76864b16cb29 202 Pfam PF02630 SCO1/SenC 45 179 3.4E-33 T 15-10-2018 IPR003782 Copper chaperone SCO1/SenC Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Trad_0286 adba9a3aff6b3e430f0c76864b16cb29 202 Gene3D G3DSA:3.40.30.10 34 197 9.7E-47 T 15-10-2018 Trad_0286 adba9a3aff6b3e430f0c76864b16cb29 202 SUPERFAMILY SSF52833 47 184 3.55E-44 T 15-10-2018 IPR036249 Thioredoxin-like superfamily Trad_1570 fbf5faaec2261a762448bd0460fbd832 419 SUPERFAMILY SSF46548 17 98 7.85E-19 T 15-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Trad_1570 fbf5faaec2261a762448bd0460fbd832 419 Pfam PF13183 4Fe-4S dicluster domain 21 88 2.5E-12 T 15-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Trad_1570 fbf5faaec2261a762448bd0460fbd832 419 Pfam PF02754 Cysteine-rich domain 309 393 3.4E-14 T 15-10-2018 IPR004017 Cysteine-rich domain Trad_1570 fbf5faaec2261a762448bd0460fbd832 419 Pfam PF02754 Cysteine-rich domain 180 259 2.2E-13 T 15-10-2018 IPR004017 Cysteine-rich domain Trad_1570 fbf5faaec2261a762448bd0460fbd832 419 PIRSF PIRSF000139 11 419 9.0E-130 T 15-10-2018 Trad_1570 fbf5faaec2261a762448bd0460fbd832 419 Gene3D G3DSA:3.30.70.20 19 89 1.8E-7 T 15-10-2018 Trad_1570 fbf5faaec2261a762448bd0460fbd832 419 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 74 85 - T 15-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Trad_1441 405cf6c0579481ad0b8b8a9aadf2015d 335 SUPERFAMILY SSF51445 14 334 4.3E-57 T 15-10-2018 IPR017853 Glycoside hydrolase superfamily Trad_1441 405cf6c0579481ad0b8b8a9aadf2015d 335 Gene3D G3DSA:3.20.20.80 2 335 2.4E-91 T 15-10-2018 Trad_1441 405cf6c0579481ad0b8b8a9aadf2015d 335 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 23 308 5.4E-41 T 15-10-2018 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 Trad_1441 405cf6c0579481ad0b8b8a9aadf2015d 335 ProSitePatterns PS00659 Glycosyl hydrolases family 5 signature. 151 160 - T 15-10-2018 IPR018087 Glycoside hydrolase, family 5, conserved site GO:0004553|GO:0005975 Trad_2088 b641ed225744d3b125ee5a4d30fbafd4 79 PIRSF PIRSF002599 1 79 7.4E-28 T 15-10-2018 IPR012156 Cold shock, CspA GO:0003676 Trad_2088 b641ed225744d3b125ee5a4d30fbafd4 79 Pfam PF00313 'Cold-shock' DNA-binding domain 3 66 2.1E-30 T 15-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Trad_2088 b641ed225744d3b125ee5a4d30fbafd4 79 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 15-10-2018 IPR019844 Cold-shock conserved site Trad_2088 b641ed225744d3b125ee5a4d30fbafd4 79 PRINTS PR00050 Cold shock protein signature 4 19 4.9E-17 T 15-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Trad_2088 b641ed225744d3b125ee5a4d30fbafd4 79 PRINTS PR00050 Cold shock protein signature 25 34 4.9E-17 T 15-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Trad_2088 b641ed225744d3b125ee5a4d30fbafd4 79 PRINTS PR00050 Cold shock protein signature 40 58 4.9E-17 T 15-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Trad_2088 b641ed225744d3b125ee5a4d30fbafd4 79 SMART SM00357 3 67 4.9E-30 T 15-10-2018 IPR011129 Cold shock domain GO:0003676 Trad_2088 b641ed225744d3b125ee5a4d30fbafd4 79 SUPERFAMILY SSF50249 1 66 1.25E-25 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold Trad_2088 b641ed225744d3b125ee5a4d30fbafd4 79 Gene3D G3DSA:2.40.50.140 1 77 8.6E-30 T 15-10-2018 Trad_2661 04d8cd186e237fd0ae86ef0f008de42b 237 PIRSF PIRSF004848 1 222 1.0E-58 T 15-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 Trad_2661 04d8cd186e237fd0ae86ef0f008de42b 237 SUPERFAMILY SSF51419 3 216 3.66E-64 T 15-10-2018 IPR029066 PLP-binding barrel Trad_2661 04d8cd186e237fd0ae86ef0f008de42b 237 Pfam PF01168 Alanine racemase, N-terminal domain 4 216 1.2E-23 T 15-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Trad_2661 04d8cd186e237fd0ae86ef0f008de42b 237 Gene3D G3DSA:3.20.20.10 1 222 8.2E-75 T 15-10-2018 IPR029066 PLP-binding barrel Trad_2661 04d8cd186e237fd0ae86ef0f008de42b 237 Hamap MF_02087 Pyridoxal phosphate homeostasis protein. 2 218 26.776 T 15-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 Trad_2661 04d8cd186e237fd0ae86ef0f008de42b 237 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 4 216 1.0E-44 T 15-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 Trad_0177 9759d2d027901aac1a556f3fbafce6e0 557 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 371 381 - T 15-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 Trad_0177 9759d2d027901aac1a556f3fbafce6e0 557 Gene3D G3DSA:1.10.8.870 416 537 2.2E-33 T 15-10-2018 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 Trad_0177 9759d2d027901aac1a556f3fbafce6e0 557 SUPERFAMILY SSF54373 253 341 1.96E-7 T 15-10-2018 Trad_0177 9759d2d027901aac1a556f3fbafce6e0 557 Gene3D G3DSA:3.30.9.10 100 342 4.9E-138 T 15-10-2018 Trad_0177 9759d2d027901aac1a556f3fbafce6e0 557 Pfam PF01266 FAD dependent oxidoreductase 16 378 4.8E-56 T 15-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 Trad_0177 9759d2d027901aac1a556f3fbafce6e0 557 Gene3D G3DSA:3.50.50.60 16 385 4.9E-138 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Trad_0177 9759d2d027901aac1a556f3fbafce6e0 557 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 399 518 2.0E-34 T 15-10-2018 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 Trad_0177 9759d2d027901aac1a556f3fbafce6e0 557 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 28 38 2.0E-35 T 15-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 Trad_0177 9759d2d027901aac1a556f3fbafce6e0 557 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 96 108 2.0E-35 T 15-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 Trad_0177 9759d2d027901aac1a556f3fbafce6e0 557 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 15 27 2.0E-35 T 15-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 Trad_0177 9759d2d027901aac1a556f3fbafce6e0 557 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 44 56 2.0E-35 T 15-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 Trad_0177 9759d2d027901aac1a556f3fbafce6e0 557 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 366 378 2.0E-35 T 15-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 Trad_0177 9759d2d027901aac1a556f3fbafce6e0 557 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 335 341 2.0E-35 T 15-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 Trad_0177 9759d2d027901aac1a556f3fbafce6e0 557 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 20 37 - T 15-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 Trad_0177 9759d2d027901aac1a556f3fbafce6e0 557 SUPERFAMILY SSF51905 7 244 4.78E-45 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Trad_2646 0a483bf1ff9ca7235be75a2f48fd15da 367 SUPERFAMILY SSF51604 113 363 3.41E-60 T 15-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Trad_2646 0a483bf1ff9ca7235be75a2f48fd15da 367 Gene3D G3DSA:3.30.390.10 7 350 5.0E-123 T 15-10-2018 IPR029017 Enolase-like, N-terminal Trad_2646 0a483bf1ff9ca7235be75a2f48fd15da 367 TIGRFAM TIGR01928 menC_lowGC/arch: o-succinylbenzoate synthase 12 331 8.9E-82 T 15-10-2018 IPR010197 o-Succinylbenzoate synthase, MenC type 2 GO:0009234|GO:0016829 KEGG: 00130+4.2.1.113|MetaCyc: PWY-5837 Trad_2646 0a483bf1ff9ca7235be75a2f48fd15da 367 Gene3D G3DSA:3.20.20.120 117 346 5.0E-123 T 15-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Trad_2646 0a483bf1ff9ca7235be75a2f48fd15da 367 SMART SM00922 142 234 4.6E-21 T 15-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal Trad_2646 0a483bf1ff9ca7235be75a2f48fd15da 367 SUPERFAMILY SSF54826 1 125 2.15E-31 T 15-10-2018 Trad_2646 0a483bf1ff9ca7235be75a2f48fd15da 367 Hamap MF_01933 o-succinylbenzoate synthase [menC]. 1 359 38.318 T 15-10-2018 IPR010197 o-Succinylbenzoate synthase, MenC type 2 GO:0009234|GO:0016829 KEGG: 00130+4.2.1.113|MetaCyc: PWY-5837 Trad_2646 0a483bf1ff9ca7235be75a2f48fd15da 367 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 16 124 1.7E-13 T 15-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain Trad_2646 0a483bf1ff9ca7235be75a2f48fd15da 367 Pfam PF13378 Enolase C-terminal domain-like 150 354 1.9E-40 T 15-10-2018 IPR029065 Enolase C-terminal domain-like Trad_0646 fc5246c2e23893445012e388fa3dcf24 386 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 356 370 - T 15-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Trad_0646 fc5246c2e23893445012e388fa3dcf24 386 Pfam PF13458 Periplasmic binding protein 24 339 2.6E-22 T 15-10-2018 IPR028081 Leucine-binding protein domain Trad_0646 fc5246c2e23893445012e388fa3dcf24 386 Gene3D G3DSA:3.40.50.2300 24 337 7.6E-26 T 15-10-2018 Trad_0646 fc5246c2e23893445012e388fa3dcf24 386 Gene3D G3DSA:3.40.50.2300 139 267 7.6E-26 T 15-10-2018 Trad_0646 fc5246c2e23893445012e388fa3dcf24 386 SUPERFAMILY SSF53822 24 380 7.07E-27 T 15-10-2018 IPR028082 Periplasmic binding protein-like I Trad_1793 2fc75bd0120a837b42e85a7cf3415723 138 Pfam PF00571 CBS domain 8 55 3.8E-9 T 15-10-2018 IPR000644 CBS domain Trad_1793 2fc75bd0120a837b42e85a7cf3415723 138 Pfam PF00571 CBS domain 68 122 3.0E-12 T 15-10-2018 IPR000644 CBS domain Trad_1793 2fc75bd0120a837b42e85a7cf3415723 138 Gene3D G3DSA:3.10.580.10 2 133 7.7E-34 T 15-10-2018 Trad_1793 2fc75bd0120a837b42e85a7cf3415723 138 SUPERFAMILY SSF54631 9 121 3.03E-29 T 15-10-2018 Trad_1793 2fc75bd0120a837b42e85a7cf3415723 138 SMART SM00116 75 123 1.1E-9 T 15-10-2018 IPR000644 CBS domain Trad_1793 2fc75bd0120a837b42e85a7cf3415723 138 SMART SM00116 10 57 9.7E-6 T 15-10-2018 IPR000644 CBS domain Trad_2548 72cfa064447863561e7543ce91db4fda 333 SUPERFAMILY SSF52096 34 305 2.15E-47 T 15-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Trad_2548 72cfa064447863561e7543ce91db4fda 333 Pfam PF14684 Tricorn protease C1 domain 33 97 4.8E-18 T 15-10-2018 IPR028204 Tricorn protease C1 domain Trad_2548 72cfa064447863561e7543ce91db4fda 333 Gene3D G3DSA:3.90.226.10 140 301 1.6E-31 T 15-10-2018 Trad_2548 72cfa064447863561e7543ce91db4fda 333 SMART SM00245 99 305 3.4E-11 T 15-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 Trad_2548 72cfa064447863561e7543ce91db4fda 333 Gene3D G3DSA:3.30.750.44 266 280 1.6E-31 T 15-10-2018 Trad_2548 72cfa064447863561e7543ce91db4fda 333 Gene3D G3DSA:3.30.750.44 40 110 2.4E-14 T 15-10-2018 Trad_2548 72cfa064447863561e7543ce91db4fda 333 Pfam PF03572 Peptidase family S41 144 303 4.1E-24 T 15-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 Trad_2268 f2b1e401ce13d7f4a70e42234e491508 234 Pfam PF02391 MoaE protein 100 207 1.4E-29 T 15-10-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 Trad_2268 f2b1e401ce13d7f4a70e42234e491508 234 SUPERFAMILY SSF54690 98 228 1.57E-37 T 15-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 Trad_2268 f2b1e401ce13d7f4a70e42234e491508 234 Pfam PF02597 ThiS family 9 83 4.8E-16 T 15-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 Trad_2268 f2b1e401ce13d7f4a70e42234e491508 234 Gene3D G3DSA:3.10.20.30 7 83 1.3E-19 T 15-10-2018 IPR012675 Beta-grasp domain superfamily Trad_2268 f2b1e401ce13d7f4a70e42234e491508 234 Gene3D G3DSA:3.90.1170.40 92 233 6.0E-41 T 15-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 Trad_2268 f2b1e401ce13d7f4a70e42234e491508 234 SUPERFAMILY SSF54285 7 81 4.91E-16 T 15-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp Trad_1574 2db0039c1fd59a82927cd9bf97f90f84 302 SUPERFAMILY SSF53850 21 300 5.97E-56 T 15-10-2018 Trad_1574 2db0039c1fd59a82927cd9bf97f90f84 302 Gene3D G3DSA:3.40.190.10 24 299 2.6E-90 T 15-10-2018 Trad_1574 2db0039c1fd59a82927cd9bf97f90f84 302 Gene3D G3DSA:3.40.190.120 126 239 2.6E-90 T 15-10-2018 Trad_1574 2db0039c1fd59a82927cd9bf97f90f84 302 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 22 296 4.4E-59 T 15-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 Trad_0269 f4afaa15469d57ffd64acf4b866a120e 220 PIRSF PIRSF000498 1 215 6.1E-68 T 15-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Trad_0269 f4afaa15469d57ffd64acf4b866a120e 220 Gene3D G3DSA:2.40.30.20 1 90 4.9E-25 T 15-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Trad_0269 f4afaa15469d57ffd64acf4b866a120e 220 SUPERFAMILY SSF63380 95 204 2.64E-30 T 15-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Trad_0269 f4afaa15469d57ffd64acf4b866a120e 220 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 204 3.0E-55 T 15-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Trad_0269 f4afaa15469d57ffd64acf4b866a120e 220 SUPERFAMILY SSF63380 1 90 4.17E-19 T 15-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Trad_0269 f4afaa15469d57ffd64acf4b866a120e 220 Pfam PF00677 Lumazine binding domain 101 195 1.0E-24 T 15-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Trad_0269 f4afaa15469d57ffd64acf4b866a120e 220 Pfam PF00677 Lumazine binding domain 3 88 1.3E-17 T 15-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Trad_0269 f4afaa15469d57ffd64acf4b866a120e 220 Gene3D G3DSA:2.40.30.20 103 211 5.5E-33 T 15-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Trad_1098 1e71b6e0945bfbf4782ead525cebab50 220 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 97 110 1.0E-7 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Trad_1098 1e71b6e0945bfbf4782ead525cebab50 220 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 146 166 1.0E-7 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Trad_1098 1e71b6e0945bfbf4782ead525cebab50 220 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 1.0E-7 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Trad_1098 1e71b6e0945bfbf4782ead525cebab50 220 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 128 144 1.0E-7 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Trad_1098 1e71b6e0945bfbf4782ead525cebab50 220 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 184 2.0E-26 T 15-10-2018 Trad_1098 1e71b6e0945bfbf4782ead525cebab50 220 Gene3D G3DSA:1.10.150.240 18 87 2.5E-53 T 15-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 Trad_1098 1e71b6e0945bfbf4782ead525cebab50 220 SUPERFAMILY SSF56784 4 207 1.18E-46 T 15-10-2018 IPR036412 HAD-like superfamily Trad_1098 1e71b6e0945bfbf4782ead525cebab50 220 Gene3D G3DSA:3.40.50.1000 3 206 2.5E-53 T 15-10-2018 IPR023214 HAD superfamily Trad_1098 1e71b6e0945bfbf4782ead525cebab50 220 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 70 184 2.7E-14 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Trad_2512 94144bee18aa96a8b34a8e46f649949c 465 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 409 419 - T 15-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site Trad_2512 94144bee18aa96a8b34a8e46f649949c 465 Gene3D G3DSA:3.40.50.200 111 465 4.1E-69 T 15-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Trad_2512 94144bee18aa96a8b34a8e46f649949c 465 PRINTS PR00723 Subtilisin serine protease family (S8) signature 191 204 1.4E-18 T 15-10-2018 IPR015500 Peptidase S8, subtilisin-related Trad_2512 94144bee18aa96a8b34a8e46f649949c 465 PRINTS PR00723 Subtilisin serine protease family (S8) signature 408 424 1.4E-18 T 15-10-2018 IPR015500 Peptidase S8, subtilisin-related Trad_2512 94144bee18aa96a8b34a8e46f649949c 465 PRINTS PR00723 Subtilisin serine protease family (S8) signature 146 165 1.4E-18 T 15-10-2018 IPR015500 Peptidase S8, subtilisin-related Trad_2512 94144bee18aa96a8b34a8e46f649949c 465 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 195 205 - T 15-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site Trad_2512 94144bee18aa96a8b34a8e46f649949c 465 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 151 162 - T 15-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site Trad_2512 94144bee18aa96a8b34a8e46f649949c 465 Pfam PF00082 Subtilase family 147 454 1.6E-41 T 15-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 Trad_2512 94144bee18aa96a8b34a8e46f649949c 465 SUPERFAMILY SSF52743 128 464 1.23E-61 T 15-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Trad_1426 6cd94fa7fc6e5f4505885223776cd6bc 227 SUPERFAMILY SSF46689 14 78 1.25E-15 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Trad_1426 6cd94fa7fc6e5f4505885223776cd6bc 227 Gene3D G3DSA:1.10.10.60 14 75 4.9E-28 T 15-10-2018 Trad_1426 6cd94fa7fc6e5f4505885223776cd6bc 227 Pfam PF02909 Tetracyclin repressor, C-terminal all-alpha domain 80 224 1.9E-22 T 15-10-2018 IPR004111 Tetracycline transcriptional regulator, TetR, C-terminal GO:0045892 Trad_1426 6cd94fa7fc6e5f4505885223776cd6bc 227 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 24 37 4.6E-5 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Trad_1426 6cd94fa7fc6e5f4505885223776cd6bc 227 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 45 68 4.6E-5 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Trad_1426 6cd94fa7fc6e5f4505885223776cd6bc 227 PRINTS PR00400 Tetracycline repressor protein signature 87 106 7.0E-9 T 15-10-2018 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 Trad_1426 6cd94fa7fc6e5f4505885223776cd6bc 227 PRINTS PR00400 Tetracycline repressor protein signature 36 59 7.0E-9 T 15-10-2018 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 Trad_1426 6cd94fa7fc6e5f4505885223776cd6bc 227 PRINTS PR00400 Tetracycline repressor protein signature 143 162 7.0E-9 T 15-10-2018 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 Trad_1426 6cd94fa7fc6e5f4505885223776cd6bc 227 Gene3D G3DSA:1.10.357.10 76 226 5.3E-38 T 15-10-2018 Trad_1426 6cd94fa7fc6e5f4505885223776cd6bc 227 SUPERFAMILY SSF48498 87 225 3.22E-33 T 15-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Trad_1426 6cd94fa7fc6e5f4505885223776cd6bc 227 Pfam PF00440 Bacterial regulatory proteins, tetR family 25 70 3.7E-10 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Trad_1534 1cbc90066b513c69d63996b8d394054b 329 PIRSF PIRSF002825 5 329 3.0E-96 T 15-10-2018 IPR026045 Ferric binding protein Trad_1534 1cbc90066b513c69d63996b8d394054b 329 Gene3D G3DSA:3.40.190.10 119 311 9.7E-113 T 15-10-2018 Trad_1534 1cbc90066b513c69d63996b8d394054b 329 Pfam PF13531 Bacterial extracellular solute-binding protein 24 281 7.4E-25 T 15-10-2018 Trad_1534 1cbc90066b513c69d63996b8d394054b 329 SUPERFAMILY SSF53850 23 316 8.16E-72 T 15-10-2018 Trad_1534 1cbc90066b513c69d63996b8d394054b 329 Gene3D G3DSA:3.40.190.10 24 298 9.7E-113 T 15-10-2018 Trad_0217 f1b5ebaecdd286b757df5021024b2448 976 SUPERFAMILY SSF49299 640 722 4.97E-16 T 15-10-2018 IPR035986 PKD domain superfamily Trad_0217 f1b5ebaecdd286b757df5021024b2448 976 SUPERFAMILY SSF50952 213 631 3.53E-22 T 15-10-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 Trad_0217 f1b5ebaecdd286b757df5021024b2448 976 Pfam PF07995 Glucose / Sorbosone dehydrogenase 234 314 1.3E-8 T 15-10-2018 IPR012938 Glucose/Sorbosone dehydrogenase Trad_0217 f1b5ebaecdd286b757df5021024b2448 976 Pfam PF07995 Glucose / Sorbosone dehydrogenase 389 625 3.8E-25 T 15-10-2018 IPR012938 Glucose/Sorbosone dehydrogenase Trad_0217 f1b5ebaecdd286b757df5021024b2448 976 SMART SM00089 639 720 1.8E-15 T 15-10-2018 IPR022409 PKD/Chitinase domain Trad_0217 f1b5ebaecdd286b757df5021024b2448 976 Gene3D G3DSA:2.120.10.30 217 630 1.5E-71 T 15-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like Trad_0217 f1b5ebaecdd286b757df5021024b2448 976 Pfam PF00801 PKD domain 644 708 8.8E-9 T 15-10-2018 IPR000601 PKD domain Trad_0217 f1b5ebaecdd286b757df5021024b2448 976 Gene3D G3DSA:2.60.40.10 632 717 5.1E-15 T 15-10-2018 IPR013783 Immunoglobulin-like fold Trad_0150 f696a02bc59b446b8999023f8fe0a811 110 Gene3D G3DSA:3.40.30.10 1 109 4.8E-34 T 15-10-2018 Trad_0150 f696a02bc59b446b8999023f8fe0a811 110 ProSitePatterns PS00194 Thioredoxin family active site. 22 40 - T 15-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 Trad_0150 f696a02bc59b446b8999023f8fe0a811 110 PIRSF PIRSF000077 1 105 6.4E-41 T 15-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 Trad_0150 f696a02bc59b446b8999023f8fe0a811 110 TIGRFAM TIGR01068 thioredoxin: thioredoxin 8 104 3.0E-38 T 15-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 Trad_0150 f696a02bc59b446b8999023f8fe0a811 110 SUPERFAMILY SSF52833 4 106 3.68E-37 T 15-10-2018 IPR036249 Thioredoxin-like superfamily Trad_0150 f696a02bc59b446b8999023f8fe0a811 110 Pfam PF00085 Thioredoxin 5 104 7.2E-30 T 15-10-2018 IPR013766 Thioredoxin domain GO:0045454 Trad_0150 f696a02bc59b446b8999023f8fe0a811 110 PRINTS PR00421 Thioredoxin family signature 21 29 1.7E-8 T 15-10-2018 Trad_0150 f696a02bc59b446b8999023f8fe0a811 110 PRINTS PR00421 Thioredoxin family signature 69 80 1.7E-8 T 15-10-2018 Trad_0150 f696a02bc59b446b8999023f8fe0a811 110 PRINTS PR00421 Thioredoxin family signature 29 38 1.7E-8 T 15-10-2018 Trad_1673 c08f623ec01d89d45246c7235a44d464 96 Pfam PF09827 CRISPR associated protein Cas2 3 74 1.4E-24 T 15-10-2018 IPR019199 Virulence-associated protein D / CRISPR associated protein Cas2 Trad_1673 c08f623ec01d89d45246c7235a44d464 96 PIRSF PIRSF032582 1 96 1.0E-36 T 15-10-2018 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 Trad_1673 c08f623ec01d89d45246c7235a44d464 96 Gene3D G3DSA:3.30.70.240 1 96 1.7E-32 T 15-10-2018 Trad_1673 c08f623ec01d89d45246c7235a44d464 96 Hamap MF_01471 CRISPR-associated endoribonuclease Cas2 [cas2]. 1 95 16.784 T 15-10-2018 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 Trad_1673 c08f623ec01d89d45246c7235a44d464 96 SUPERFAMILY SSF143430 3 89 6.28E-25 T 15-10-2018 Trad_1673 c08f623ec01d89d45246c7235a44d464 96 TIGRFAM TIGR01573 cas2: CRISPR-associated endonuclease Cas2 3 78 1.8E-20 T 15-10-2018 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 Trad_2142 5c5606ed82b355d18bfc64db29330cf3 109 Gene3D G3DSA:3.30.70.100 2 100 1.1E-28 T 15-10-2018 Trad_2142 5c5606ed82b355d18bfc64db29330cf3 109 SUPERFAMILY SSF54909 4 109 3.82E-32 T 15-10-2018 IPR011008 Dimeric alpha-beta barrel Trad_2142 5c5606ed82b355d18bfc64db29330cf3 109 Pfam PF05336 L-rhamnose mutarotase 5 108 1.0E-30 T 15-10-2018 IPR008000 Rhamnose/fucose mutarotase GO:0005737|GO:0016857 Trad_0740 0f081b5082b9314991f2c66f9a5dbf27 403 Gene3D G3DSA:3.90.170.10 255 397 8.4E-46 T 15-10-2018 Trad_0740 0f081b5082b9314991f2c66f9a5dbf27 403 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 124 135 - T 15-10-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 Trad_0740 0f081b5082b9314991f2c66f9a5dbf27 403 SMART SM00788 3 398 8.1E-185 T 15-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 Trad_0740 0f081b5082b9314991f2c66f9a5dbf27 403 Gene3D G3DSA:1.10.300.10 99 189 3.0E-83 T 15-10-2018 Trad_0740 0f081b5082b9314991f2c66f9a5dbf27 403 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 403 141.855 T 15-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 Trad_0740 0f081b5082b9314991f2c66f9a5dbf27 403 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 396 5.8E-123 T 15-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 Trad_0740 0f081b5082b9314991f2c66f9a5dbf27 403 Gene3D G3DSA:3.40.440.10 5 244 3.0E-83 T 15-10-2018 Trad_0740 0f081b5082b9314991f2c66f9a5dbf27 403 SUPERFAMILY SSF52540 2 397 3.61E-132 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_0740 0f081b5082b9314991f2c66f9a5dbf27 403 Pfam PF00709 Adenylosuccinate synthetase 4 396 2.0E-138 T 15-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 Trad_0740 0f081b5082b9314991f2c66f9a5dbf27 403 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 10 17 - T 15-10-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 Trad_1489 a1531ae60eca69ab704f886772619177 503 SUPERFAMILY SSF53743 6 328 1.31E-111 T 15-10-2018 IPR009015 L-fucose isomerase, N-terminal/central domain superfamily GO:0005737|GO:0005996|GO:0016861 Trad_1489 a1531ae60eca69ab704f886772619177 503 PIRSF PIRSF001478 4 499 5.5E-221 T 15-10-2018 IPR003762 L-arabinose isomerase GO:0008733 KEGG: 00040+5.3.1.4 Trad_1489 a1531ae60eca69ab704f886772619177 503 Hamap MF_00519 L-arabinose isomerase [araA]. 4 476 62.053 T 15-10-2018 IPR003762 L-arabinose isomerase GO:0008733 KEGG: 00040+5.3.1.4 Trad_1489 a1531ae60eca69ab704f886772619177 503 Pfam PF11762 L-arabinose isomerase C-terminal domain 363 475 5.6E-50 T 15-10-2018 IPR024664 L-arabinose isomerase, C-terminal KEGG: 00040+5.3.1.4 Trad_1489 a1531ae60eca69ab704f886772619177 503 ProDom PD018364 ISOMERASE L-ARABINOSE ARABINOSE METABOLISM CARBOHYDRATE CATABOLISM ARAA 7 307 3.0E-92 T 15-10-2018 IPR003762 L-arabinose isomerase GO:0008733 KEGG: 00040+5.3.1.4 Trad_1489 a1531ae60eca69ab704f886772619177 503 Gene3D G3DSA:3.40.50.10940 4 178 2.1E-70 T 15-10-2018 IPR038583 L-arabinose isomerase, N-terminal domain superfamily KEGG: 00040+5.3.1.4 Trad_1489 a1531ae60eca69ab704f886772619177 503 Pfam PF02610 L-arabinose isomerase 8 360 1.7E-164 T 15-10-2018 IPR003762 L-arabinose isomerase GO:0008733 KEGG: 00040+5.3.1.4 Trad_1489 a1531ae60eca69ab704f886772619177 503 SUPERFAMILY SSF50443 330 497 3.66E-70 T 15-10-2018 IPR004216 L-fucose/L-arabinose isomerase, C-terminal Trad_2615 2eab13858007ffbdcedc761ca4999206 207 SUPERFAMILY SSF63999 3 122 1.57E-25 T 15-10-2018 IPR036759 Thiamin pyrophosphokinase, catalytic domain superfamily GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 Trad_2615 2eab13858007ffbdcedc761ca4999206 207 SMART SM00983 138 202 2.8E-7 T 15-10-2018 IPR007373 Thiamin pyrophosphokinase, thiamin-binding domain GO:0009229|GO:0030975 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 Trad_2615 2eab13858007ffbdcedc761ca4999206 207 TIGRFAM TIGR01378 thi_PPkinase: thiamine pyrophosphokinase 4 202 2.3E-41 T 15-10-2018 IPR006282 Thiamin pyrophosphokinase GO:0004788|GO:0006772 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 Trad_2615 2eab13858007ffbdcedc761ca4999206 207 Pfam PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain 148 199 6.4E-8 T 15-10-2018 IPR007373 Thiamin pyrophosphokinase, thiamin-binding domain GO:0009229|GO:0030975 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 Trad_2615 2eab13858007ffbdcedc761ca4999206 207 Pfam PF04263 Thiamin pyrophosphokinase, catalytic domain 23 118 1.4E-17 T 15-10-2018 IPR007371 Thiamin pyrophosphokinase, catalytic domain GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 Trad_2615 2eab13858007ffbdcedc761ca4999206 207 Gene3D G3DSA:3.40.50.10240 3 206 4.1E-44 T 15-10-2018 IPR036759 Thiamin pyrophosphokinase, catalytic domain superfamily GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 Trad_0837 23467ed7d80952dc0330786046ca792d 132 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 2 131 10.979 T 15-10-2018 IPR022907 VapC family GO:0004540 Trad_0837 23467ed7d80952dc0330786046ca792d 132 Gene3D G3DSA:3.40.50.1010 1 131 3.5E-30 T 15-10-2018 Trad_0837 23467ed7d80952dc0330786046ca792d 132 Pfam PF01850 PIN domain 3 123 1.6E-9 T 15-10-2018 IPR002716 PIN domain Trad_0837 23467ed7d80952dc0330786046ca792d 132 SUPERFAMILY SSF88723 1 130 1.65E-29 T 15-10-2018 IPR029060 PIN-like domain superfamily Trad_0171 d01da29b2d9d954c269d516fadaf995b 174 SMART SM01021 1 172 1.7E-28 T 15-10-2018 IPR001425 Archaeal/bacterial/fungal rhodopsins GO:0005216|GO:0006811|GO:0016020 Trad_0171 d01da29b2d9d954c269d516fadaf995b 174 SUPERFAMILY SSF81321 4 158 1.98E-41 T 15-10-2018 Trad_0171 d01da29b2d9d954c269d516fadaf995b 174 Pfam PF01036 Bacteriorhodopsin-like protein 6 164 1.0E-33 T 15-10-2018 IPR001425 Archaeal/bacterial/fungal rhodopsins GO:0005216|GO:0006811|GO:0016020 Trad_0171 d01da29b2d9d954c269d516fadaf995b 174 PRINTS PR00251 Bacterial opsin signature 32 53 1.5E-17 T 15-10-2018 IPR001425 Archaeal/bacterial/fungal rhodopsins GO:0005216|GO:0006811|GO:0016020 Trad_0171 d01da29b2d9d954c269d516fadaf995b 174 PRINTS PR00251 Bacterial opsin signature 88 109 1.5E-17 T 15-10-2018 IPR001425 Archaeal/bacterial/fungal rhodopsins GO:0005216|GO:0006811|GO:0016020 Trad_0171 d01da29b2d9d954c269d516fadaf995b 174 PRINTS PR00251 Bacterial opsin signature 129 147 1.5E-17 T 15-10-2018 IPR001425 Archaeal/bacterial/fungal rhodopsins GO:0005216|GO:0006811|GO:0016020 Trad_0171 d01da29b2d9d954c269d516fadaf995b 174 Gene3D G3DSA:1.20.1070.10 1 166 4.3E-54 T 15-10-2018 Trad_0171 d01da29b2d9d954c269d516fadaf995b 174 ProSitePatterns PS00950 Bacterial rhodopsins signature 1. 34 46 - T 15-10-2018 IPR018229 Rhodopsin, retinal binding site GO:0005216|GO:0006811|GO:0016020 Trad_2694 74883fe46fc6e94203ceb09009874d50 504 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 65 421 3.6E-103 T 15-10-2018 IPR000914 Solute-binding protein family 5 domain Trad_2694 74883fe46fc6e94203ceb09009874d50 504 Gene3D G3DSA:3.90.76.10 32 180 9.8E-152 T 15-10-2018 Trad_2694 74883fe46fc6e94203ceb09009874d50 504 PIRSF PIRSF002741 15 502 4.8E-130 T 15-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Trad_2694 74883fe46fc6e94203ceb09009874d50 504 Gene3D G3DSA:3.40.190.10 181 486 9.8E-152 T 15-10-2018 Trad_2694 74883fe46fc6e94203ceb09009874d50 504 SUPERFAMILY SSF53850 21 501 5.43E-152 T 15-10-2018 Trad_2694 74883fe46fc6e94203ceb09009874d50 504 Gene3D G3DSA:3.10.105.10 257 476 9.8E-152 T 15-10-2018 Trad_0594 a80f83698c47c767c8fa01af1ba469e7 479 PIRSF PIRSF003095 1 461 1.2E-77 T 15-10-2018 IPR005215 Trigger factor GO:0015031 Trad_0594 a80f83698c47c767c8fa01af1ba469e7 479 Pfam PF05697 Bacterial trigger factor protein (TF) 1 144 4.7E-34 T 15-10-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 Trad_0594 a80f83698c47c767c8fa01af1ba469e7 479 Gene3D G3DSA:3.30.70.1050 2 113 1.2E-30 T 15-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 Trad_0594 a80f83698c47c767c8fa01af1ba469e7 479 SUPERFAMILY SSF109998 273 440 6.41E-22 T 15-10-2018 IPR027304 Trigger factor/SurA domain superfamily Trad_0594 a80f83698c47c767c8fa01af1ba469e7 479 SUPERFAMILY SSF54534 96 208 6.54E-10 T 15-10-2018 Trad_0594 a80f83698c47c767c8fa01af1ba469e7 479 Gene3D G3DSA:1.10.3120.10 267 447 3.1E-23 T 15-10-2018 IPR037041 Trigger factor, C-terminal domain superfamily GO:0006457|GO:0015031 Trad_0594 a80f83698c47c767c8fa01af1ba469e7 479 SUPERFAMILY SSF102735 1 126 4.45E-27 T 15-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 Trad_0594 a80f83698c47c767c8fa01af1ba469e7 479 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 285 441 3.8E-19 T 15-10-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 Trad_0594 a80f83698c47c767c8fa01af1ba469e7 479 TIGRFAM TIGR00115 tig: trigger factor 12 441 2.3E-78 T 15-10-2018 IPR005215 Trigger factor GO:0015031 Trad_0594 a80f83698c47c767c8fa01af1ba469e7 479 Hamap MF_00303 Trigger factor [tig]. 1 465 15.677 T 15-10-2018 IPR005215 Trigger factor GO:0015031 Trad_1604 5c2b8ae7df58ee6875732487113a8a59 450 Gene3D G3DSA:3.40.50.720 1 82 3.4E-10 T 15-10-2018 Trad_1604 5c2b8ae7df58ee6875732487113a8a59 450 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 2 432 1.6E-105 T 15-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Trad_1604 5c2b8ae7df58ee6875732487113a8a59 450 SUPERFAMILY SSF53244 289 434 2.24E-28 T 15-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Trad_1604 5c2b8ae7df58ee6875732487113a8a59 450 SUPERFAMILY SSF51984 2 83 4.05E-11 T 15-10-2018 Trad_1604 5c2b8ae7df58ee6875732487113a8a59 450 Gene3D G3DSA:3.40.1190.10 83 289 3.8E-52 T 15-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Trad_1604 5c2b8ae7df58ee6875732487113a8a59 450 Gene3D G3DSA:3.90.190.20 290 430 1.7E-29 T 15-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Trad_1604 5c2b8ae7df58ee6875732487113a8a59 450 Pfam PF08245 Mur ligase middle domain 99 270 3.2E-27 T 15-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Trad_1604 5c2b8ae7df58ee6875732487113a8a59 450 SUPERFAMILY SSF53623 85 287 6.11E-49 T 15-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Trad_1604 5c2b8ae7df58ee6875732487113a8a59 450 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 1 434 28.904 T 15-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Trad_1658 bdeda91b3baf083553876ef07c026be1 789 PIRSF PIRSF001227 1 786 9.0E-216 T 15-10-2018 IPR014395 Penicillin/GL-7-ACA/AHL acylase GO:0016811 Trad_1658 bdeda91b3baf083553876ef07c026be1 789 Gene3D G3DSA:1.10.1400.10 542 671 1.3E-195 T 15-10-2018 Trad_1658 bdeda91b3baf083553876ef07c026be1 789 Gene3D G3DSA:1.10.439.10 17 175 2.6E-63 T 15-10-2018 IPR023343 Penicillin amidase type, domain 1 GO:0016811 Trad_1658 bdeda91b3baf083553876ef07c026be1 789 Gene3D G3DSA:3.60.20.10 242 761 1.3E-195 T 15-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Trad_1658 bdeda91b3baf083553876ef07c026be1 789 SUPERFAMILY SSF56235 37 785 1.47E-246 T 15-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Trad_1658 bdeda91b3baf083553876ef07c026be1 789 Gene3D G3DSA:2.30.120.10 314 392 1.3E-195 T 15-10-2018 Trad_1658 bdeda91b3baf083553876ef07c026be1 789 Pfam PF01804 Penicillin amidase 41 774 2.3E-247 T 15-10-2018 IPR002692 Penicillin/GL-7-ACA/AHL/aculeacin-A acylase GO:0016787|GO:0017000 Trad_1192 119916cca21ba1005fbf898928458bfd 1108 Pfam PF04465 Protein of unknown function (DUF499) 297 703 3.4E-28 T 15-10-2018 IPR007555 Protein of unknown function DUF499 Trad_1607 104cae0fca9a7fe6f153ce4465fe9bb9 459 Gene3D G3DSA:3.40.50.720 3 90 1.9E-27 T 15-10-2018 Trad_1607 104cae0fca9a7fe6f153ce4465fe9bb9 459 Gene3D G3DSA:3.90.190.20 308 453 3.1E-42 T 15-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Trad_1607 104cae0fca9a7fe6f153ce4465fe9bb9 459 SUPERFAMILY SSF53623 89 308 1.83E-52 T 15-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Trad_1607 104cae0fca9a7fe6f153ce4465fe9bb9 459 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 2 454 33.5 T 15-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Trad_1607 104cae0fca9a7fe6f153ce4465fe9bb9 459 Pfam PF08245 Mur ligase middle domain 107 290 1.4E-17 T 15-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Trad_1607 104cae0fca9a7fe6f153ce4465fe9bb9 459 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 4 448 5.8E-123 T 15-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Trad_1607 104cae0fca9a7fe6f153ce4465fe9bb9 459 SUPERFAMILY SSF51984 4 86 3.01E-22 T 15-10-2018 Trad_1607 104cae0fca9a7fe6f153ce4465fe9bb9 459 SUPERFAMILY SSF53244 309 447 1.15E-35 T 15-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Trad_1607 104cae0fca9a7fe6f153ce4465fe9bb9 459 Pfam PF01225 Mur ligase family, catalytic domain 4 102 1.7E-20 T 15-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 Trad_1607 104cae0fca9a7fe6f153ce4465fe9bb9 459 Pfam PF02875 Mur ligase family, glutamate ligase domain 310 392 4.2E-14 T 15-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Trad_1607 104cae0fca9a7fe6f153ce4465fe9bb9 459 Gene3D G3DSA:3.40.1190.10 91 307 2.2E-57 T 15-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Trad_0335 443a5abd93f71af783f0afbe3e6ea305 284 Gene3D G3DSA:3.40.190.10 82 181 1.5E-52 T 15-10-2018 Trad_0335 443a5abd93f71af783f0afbe3e6ea305 284 SUPERFAMILY SSF53850 3 196 1.3E-32 T 15-10-2018 Trad_0335 443a5abd93f71af783f0afbe3e6ea305 284 SUPERFAMILY SSF54782 203 281 4.45E-10 T 15-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Trad_0335 443a5abd93f71af783f0afbe3e6ea305 284 Gene3D G3DSA:3.40.190.10 4 192 1.5E-52 T 15-10-2018 Trad_0335 443a5abd93f71af783f0afbe3e6ea305 284 Gene3D G3DSA:3.30.160.40 203 283 5.8E-10 T 15-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Trad_0335 443a5abd93f71af783f0afbe3e6ea305 284 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 46 192 2.3E-23 T 15-10-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Trad_0335 443a5abd93f71af783f0afbe3e6ea305 284 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 209 277 6.8E-7 T 15-10-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Trad_2216 b541063c8554e3fa45e32f81897ab7da 734 Gene3D G3DSA:1.10.8.60 641 730 1.2E-10 T 15-10-2018 Trad_2216 b541063c8554e3fa45e32f81897ab7da 734 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 197 330 2.6E-14 T 15-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Trad_2216 b541063c8554e3fa45e32f81897ab7da 734 SMART SM00382 192 336 4.3E-14 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_2216 b541063c8554e3fa45e32f81897ab7da 734 SMART SM00382 476 642 3.8E-12 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_2216 b541063c8554e3fa45e32f81897ab7da 734 Gene3D G3DSA:3.40.50.300 145 333 2.1E-70 T 15-10-2018 Trad_2216 b541063c8554e3fa45e32f81897ab7da 734 SUPERFAMILY SSF52540 435 710 1.23E-61 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_2216 b541063c8554e3fa45e32f81897ab7da 734 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 286 298 - T 15-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 Trad_2216 b541063c8554e3fa45e32f81897ab7da 734 SUPERFAMILY SSF81923 2 140 7.59E-21 T 15-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 Trad_2216 b541063c8554e3fa45e32f81897ab7da 734 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 642 714 1.0E-10 T 15-10-2018 IPR019489 Clp ATPase, C-terminal Trad_2216 b541063c8554e3fa45e32f81897ab7da 734 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 587 601 2.0E-35 T 15-10-2018 IPR001270 ClpA/B family GO:0005524 Trad_2216 b541063c8554e3fa45e32f81897ab7da 734 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 525 543 2.0E-35 T 15-10-2018 IPR001270 ClpA/B family GO:0005524 Trad_2216 b541063c8554e3fa45e32f81897ab7da 734 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 554 572 2.0E-35 T 15-10-2018 IPR001270 ClpA/B family GO:0005524 Trad_2216 b541063c8554e3fa45e32f81897ab7da 734 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 480 498 2.0E-35 T 15-10-2018 IPR001270 ClpA/B family GO:0005524 Trad_2216 b541063c8554e3fa45e32f81897ab7da 734 Pfam PF07724 AAA domain (Cdc48 subfamily) 478 635 6.0E-45 T 15-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Trad_2216 b541063c8554e3fa45e32f81897ab7da 734 Gene3D G3DSA:1.10.8.60 334 430 2.3E-24 T 15-10-2018 Trad_2216 b541063c8554e3fa45e32f81897ab7da 734 Gene3D G3DSA:1.10.1780.10 1 144 1.1E-40 T 15-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 Trad_2216 b541063c8554e3fa45e32f81897ab7da 734 SMART SM01086 641 727 4.9E-8 T 15-10-2018 IPR019489 Clp ATPase, C-terminal Trad_2216 b541063c8554e3fa45e32f81897ab7da 734 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 15 66 9.9E-15 T 15-10-2018 IPR004176 Clp, N-terminal Trad_2216 b541063c8554e3fa45e32f81897ab7da 734 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 91 140 2.7E-11 T 15-10-2018 IPR004176 Clp, N-terminal Trad_2216 b541063c8554e3fa45e32f81897ab7da 734 SUPERFAMILY SSF52540 153 405 2.02E-68 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_2216 b541063c8554e3fa45e32f81897ab7da 734 Gene3D G3DSA:3.40.50.300 431 640 5.6E-73 T 15-10-2018 Trad_2771 028bb1c00c4b71225814ecfc302590b9 390 SUPERFAMILY SSF53901 1 264 8.16E-65 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 Trad_2771 028bb1c00c4b71225814ecfc302590b9 390 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 87 105 - T 15-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 Trad_2771 028bb1c00c4b71225814ecfc302590b9 390 Pfam PF02803 Thiolase, C-terminal domain 267 388 1.4E-48 T 15-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 Trad_2771 028bb1c00c4b71225814ecfc302590b9 390 SUPERFAMILY SSF53901 268 389 6.96E-43 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 Trad_2771 028bb1c00c4b71225814ecfc302590b9 390 Gene3D G3DSA:3.40.47.10 5 273 2.2E-142 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 Trad_2771 028bb1c00c4b71225814ecfc302590b9 390 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 7 387 2.0E-134 T 15-10-2018 IPR002155 Thiolase GO:0016747 Trad_2771 028bb1c00c4b71225814ecfc302590b9 390 PIRSF PIRSF000429 1 390 4.5E-123 T 15-10-2018 IPR002155 Thiolase GO:0016747 Trad_2771 028bb1c00c4b71225814ecfc302590b9 390 ProSitePatterns PS00099 Thiolases active site. 371 384 - T 15-10-2018 IPR020610 Thiolase, active site GO:0016747 Trad_2771 028bb1c00c4b71225814ecfc302590b9 390 Gene3D G3DSA:3.40.47.10 133 384 2.2E-142 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 Trad_2771 028bb1c00c4b71225814ecfc302590b9 390 Pfam PF00108 Thiolase, N-terminal domain 5 260 4.4E-63 T 15-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 Trad_2771 028bb1c00c4b71225814ecfc302590b9 390 ProSitePatterns PS00737 Thiolases signature 2. 336 352 - T 15-10-2018 IPR020613 Thiolase, conserved site GO:0016747 Trad_0244 91c01d4f86c5642ec1410b6137c2cf74 451 Gene3D G3DSA:3.40.50.720 233 364 7.3E-36 T 15-10-2018 Trad_0244 91c01d4f86c5642ec1410b6137c2cf74 451 Pfam PF02254 TrkA-N domain 7 113 1.4E-23 T 15-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 Trad_0244 91c01d4f86c5642ec1410b6137c2cf74 451 Pfam PF02254 TrkA-N domain 234 346 2.6E-24 T 15-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 Trad_0244 91c01d4f86c5642ec1410b6137c2cf74 451 Pfam PF02080 TrkA-C domain 159 225 8.9E-12 T 15-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 Trad_0244 91c01d4f86c5642ec1410b6137c2cf74 451 Pfam PF02080 TrkA-C domain 393 445 2.1E-10 T 15-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 Trad_0244 91c01d4f86c5642ec1410b6137c2cf74 451 Gene3D G3DSA:3.30.70.1450 366 445 6.0E-14 T 15-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Trad_0244 91c01d4f86c5642ec1410b6137c2cf74 451 Gene3D G3DSA:3.30.70.1450 145 231 2.0E-15 T 15-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Trad_0244 91c01d4f86c5642ec1410b6137c2cf74 451 SUPERFAMILY SSF116726 146 225 4.71E-11 T 15-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Trad_0244 91c01d4f86c5642ec1410b6137c2cf74 451 Gene3D G3DSA:3.40.50.720 3 144 1.6E-34 T 15-10-2018 Trad_0244 91c01d4f86c5642ec1410b6137c2cf74 451 SUPERFAMILY SSF116726 362 445 6.8E-11 T 15-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Trad_0244 91c01d4f86c5642ec1410b6137c2cf74 451 PRINTS PR00335 TrkA potassium uptake protein signature 292 302 1.6E-10 T 15-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 Trad_0244 91c01d4f86c5642ec1410b6137c2cf74 451 PRINTS PR00335 TrkA potassium uptake protein signature 6 20 1.6E-10 T 15-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 Trad_0244 91c01d4f86c5642ec1410b6137c2cf74 451 PRINTS PR00335 TrkA potassium uptake protein signature 281 291 1.6E-10 T 15-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 Trad_0244 91c01d4f86c5642ec1410b6137c2cf74 451 PRINTS PR00335 TrkA potassium uptake protein signature 305 319 1.6E-10 T 15-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 Trad_0244 91c01d4f86c5642ec1410b6137c2cf74 451 PRINTS PR00335 TrkA potassium uptake protein signature 22 36 1.6E-10 T 15-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 Trad_0244 91c01d4f86c5642ec1410b6137c2cf74 451 SUPERFAMILY SSF51735 231 375 1.67E-33 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_0244 91c01d4f86c5642ec1410b6137c2cf74 451 SUPERFAMILY SSF51735 4 146 2.94E-27 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_0222 85b7b7283c103a3e6260d8646244a4d0 346 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 2 332 5.2E-113 T 15-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 Trad_0222 85b7b7283c103a3e6260d8646244a4d0 346 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 17 26 - T 15-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 Trad_0222 85b7b7283c103a3e6260d8646244a4d0 346 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 1 333 44.048 T 15-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 Trad_0222 85b7b7283c103a3e6260d8646244a4d0 346 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 4 331 3.0E-112 T 15-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 Trad_0222 85b7b7283c103a3e6260d8646244a4d0 346 Gene3D G3DSA:3.20.20.210 1 340 2.9E-129 T 15-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 Trad_0222 85b7b7283c103a3e6260d8646244a4d0 346 SUPERFAMILY SSF51726 3 334 3.31E-96 T 15-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 Trad_0690 a31b8aa3f9b9af4690718ee92176354a 359 Hamap MF_00268 Protein RecA [recA]. 19 344 50.162 T 15-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Trad_0690 a31b8aa3f9b9af4690718ee92176354a 359 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 19 337 2.1E-163 T 15-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Trad_0690 a31b8aa3f9b9af4690718ee92176354a 359 Gene3D G3DSA:3.40.50.300 47 282 2.8E-79 T 15-10-2018 Trad_0690 a31b8aa3f9b9af4690718ee92176354a 359 SUPERFAMILY SSF54752 284 338 5.89E-14 T 15-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal Trad_0690 a31b8aa3f9b9af4690718ee92176354a 359 SUPERFAMILY SSF52540 22 282 1.17E-58 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_0690 a31b8aa3f9b9af4690718ee92176354a 359 Gene3D G3DSA:3.30.250.10 283 342 3.0E-19 T 15-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal Trad_0690 a31b8aa3f9b9af4690718ee92176354a 359 PRINTS PR00142 RecA protein signature 312 329 3.7E-83 T 15-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Trad_0690 a31b8aa3f9b9af4690718ee92176354a 359 PRINTS PR00142 RecA protein signature 180 209 3.7E-83 T 15-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Trad_0690 a31b8aa3f9b9af4690718ee92176354a 359 PRINTS PR00142 RecA protein signature 108 137 3.7E-83 T 15-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Trad_0690 a31b8aa3f9b9af4690718ee92176354a 359 PRINTS PR00142 RecA protein signature 258 287 3.7E-83 T 15-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Trad_0690 a31b8aa3f9b9af4690718ee92176354a 359 PRINTS PR00142 RecA protein signature 142 171 3.7E-83 T 15-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Trad_0690 a31b8aa3f9b9af4690718ee92176354a 359 PRINTS PR00142 RecA protein signature 225 253 3.7E-83 T 15-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Trad_0690 a31b8aa3f9b9af4690718ee92176354a 359 Pfam PF00154 recA bacterial DNA recombination protein 22 283 4.0E-140 T 15-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Trad_0690 a31b8aa3f9b9af4690718ee92176354a 359 SMART SM00382 72 243 5.0E-8 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_0690 a31b8aa3f9b9af4690718ee92176354a 359 ProSitePatterns PS00321 recA signature. 228 236 - T 15-10-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 Trad_1917 6d9fb4efa7a674b1c929dd16e61af9ff 724 SUPERFAMILY SSF52540 4 243 2.46E-24 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_1917 6d9fb4efa7a674b1c929dd16e61af9ff 724 Pfam PF07085 DRTGG domain 236 345 5.7E-20 T 15-10-2018 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 Trad_1917 6d9fb4efa7a674b1c929dd16e61af9ff 724 Gene3D G3DSA:3.40.50.10750 531 684 5.0E-136 T 15-10-2018 Trad_1917 6d9fb4efa7a674b1c929dd16e61af9ff 724 Pfam PF13500 AAA domain 3 232 1.7E-33 T 15-10-2018 Trad_1917 6d9fb4efa7a674b1c929dd16e61af9ff 724 SUPERFAMILY SSF75138 232 353 3.26E-18 T 15-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily Trad_1917 6d9fb4efa7a674b1c929dd16e61af9ff 724 Gene3D G3DSA:3.40.50.300 3 212 4.1E-23 T 15-10-2018 Trad_1917 6d9fb4efa7a674b1c929dd16e61af9ff 724 Pfam PF01515 Phosphate acetyl/butaryl transferase 393 708 6.1E-125 T 15-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 Trad_1917 6d9fb4efa7a674b1c929dd16e61af9ff 724 SUPERFAMILY SSF53659 394 711 2.06E-93 T 15-10-2018 Trad_1917 6d9fb4efa7a674b1c929dd16e61af9ff 724 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 408 708 2.5E-128 T 15-10-2018 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 Trad_1917 6d9fb4efa7a674b1c929dd16e61af9ff 724 Gene3D G3DSA:3.40.50.10950 399 711 5.0E-136 T 15-10-2018 Trad_1917 6d9fb4efa7a674b1c929dd16e61af9ff 724 Gene3D G3DSA:3.40.1390.20 226 366 9.8E-18 T 15-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily Trad_1917 6d9fb4efa7a674b1c929dd16e61af9ff 724 PIRSF PIRSF006107 1 716 0.0 T 15-10-2018 IPR016475 Phosphate acetyltransferase, bacteria GO:0008959 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 Trad_2791 17b0647e4497c837fe88b4fa972df87e 330 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 4 324 64.094 T 15-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 Trad_2791 17b0647e4497c837fe88b4fa972df87e 330 Gene3D G3DSA:3.40.47.10 177 327 5.8E-51 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 Trad_2791 17b0647e4497c837fe88b4fa972df87e 330 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 236 324 3.0E-34 T 15-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 Trad_2791 17b0647e4497c837fe88b4fa972df87e 330 SUPERFAMILY SSF53901 7 324 3.32E-64 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 Trad_2791 17b0647e4497c837fe88b4fa972df87e 330 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 109 187 1.7E-27 T 15-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 Trad_2791 17b0647e4497c837fe88b4fa972df87e 330 Gene3D G3DSA:3.40.47.10 5 176 2.0E-63 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 Trad_2791 17b0647e4497c837fe88b4fa972df87e 330 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 5 324 8.8E-111 T 15-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 Trad_2656 ded90147cbebadfb842a1cb35eeeda61 89 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 5 85 1.4E-5 T 15-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family Trad_2656 ded90147cbebadfb842a1cb35eeeda61 89 SUPERFAMILY SSF143011 3 84 1.7E-10 T 15-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily Trad_2656 ded90147cbebadfb842a1cb35eeeda61 89 Gene3D G3DSA:3.30.2310.20 1 89 9.8E-18 T 15-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily Trad_2585 fac200e5ba0635ad28e3d65ff9f199f3 408 Gene3D G3DSA:3.40.630.10 23 395 4.6E-89 T 15-10-2018 Trad_2585 fac200e5ba0635ad28e3d65ff9f199f3 408 SUPERFAMILY SSF55031 199 307 8.22E-13 T 15-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain Trad_2585 fac200e5ba0635ad28e3d65ff9f199f3 408 Gene3D G3DSA:3.30.70.360 199 321 4.6E-89 T 15-10-2018 Trad_2585 fac200e5ba0635ad28e3d65ff9f199f3 408 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 89 98 - T 15-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 Trad_2585 fac200e5ba0635ad28e3d65ff9f199f3 408 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 125 163 - T 15-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 Trad_2585 fac200e5ba0635ad28e3d65ff9f199f3 408 SUPERFAMILY SSF53187 12 405 1.97E-62 T 15-10-2018 Trad_2585 fac200e5ba0635ad28e3d65ff9f199f3 408 TIGRFAM TIGR01910 DapE-ArgE: peptidase, ArgE/DapE family 21 395 1.4E-68 T 15-10-2018 IPR010182 N-formyl-4-amino-5-aminomethyl-2-methylpyrimidine deformylase/Succinyl-diaminopimelate desuccinylase Trad_2585 fac200e5ba0635ad28e3d65ff9f199f3 408 Pfam PF07687 Peptidase dimerisation domain 197 306 9.2E-12 T 15-10-2018 IPR011650 Peptidase M20, dimerisation domain Trad_2585 fac200e5ba0635ad28e3d65ff9f199f3 408 Pfam PF01546 Peptidase family M20/M25/M40 90 403 3.2E-37 T 15-10-2018 IPR002933 Peptidase M20 GO:0016787 Trad_0279 b6115fb6ad0ea8072d8a4af897da86ca 180 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 2.8E-8 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Trad_0279 b6115fb6ad0ea8072d8a4af897da86ca 180 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 2.8E-8 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Trad_0279 b6115fb6ad0ea8072d8a4af897da86ca 180 SUPERFAMILY SSF48498 77 177 1.33E-16 T 15-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Trad_0279 b6115fb6ad0ea8072d8a4af897da86ca 180 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 58 7.8E-14 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Trad_0279 b6115fb6ad0ea8072d8a4af897da86ca 180 Pfam PF13305 WHG domain 86 155 5.7E-9 T 15-10-2018 IPR025996 WHG domain Trad_0279 b6115fb6ad0ea8072d8a4af897da86ca 180 Gene3D G3DSA:1.10.10.60 5 56 2.3E-17 T 15-10-2018 Trad_0279 b6115fb6ad0ea8072d8a4af897da86ca 180 SUPERFAMILY SSF46689 2 73 9.93E-16 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Trad_0279 b6115fb6ad0ea8072d8a4af897da86ca 180 Gene3D G3DSA:1.10.357.10 57 179 1.7E-24 T 15-10-2018 Trad_1298 cb4a37880c801ca09acc0409d5042f6d 367 Pfam PF12725 Protein of unknown function (DUF3810) 34 342 6.6E-54 T 15-10-2018 IPR024294 Protein of unknown function DUF3810 Trad_0639 213a7bc0af44d4680bb633a7dfa51455 218 SUPERFAMILY SSF46785 134 210 8.71E-13 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Trad_0639 213a7bc0af44d4680bb633a7dfa51455 218 Pfam PF13545 Crp-like helix-turn-helix domain 136 210 1.9E-15 T 15-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Trad_0639 213a7bc0af44d4680bb633a7dfa51455 218 Gene3D G3DSA:2.60.120.10 23 132 5.7E-17 T 15-10-2018 IPR014710 RmlC-like jelly roll fold Trad_0639 213a7bc0af44d4680bb633a7dfa51455 218 Pfam PF00027 Cyclic nucleotide-binding domain 26 105 3.0E-13 T 15-10-2018 IPR000595 Cyclic nucleotide-binding domain Trad_0639 213a7bc0af44d4680bb633a7dfa51455 218 SMART SM00100 1 127 3.3E-4 T 15-10-2018 IPR000595 Cyclic nucleotide-binding domain Trad_0639 213a7bc0af44d4680bb633a7dfa51455 218 Gene3D G3DSA:1.10.10.10 134 212 5.4E-17 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Trad_0639 213a7bc0af44d4680bb633a7dfa51455 218 SUPERFAMILY SSF51206 26 110 1.83E-17 T 15-10-2018 IPR018490 Cyclic nucleotide-binding-like Trad_0639 213a7bc0af44d4680bb633a7dfa51455 218 SMART SM00419 156 204 0.0035 T 15-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Trad_1263 315d7709b8f0bacd2449237d2e2b4164 256 Pfam PF12804 MobA-like NTP transferase domain 4 197 5.0E-20 T 15-10-2018 IPR025877 MobA-like NTP transferase Trad_1263 315d7709b8f0bacd2449237d2e2b4164 256 Gene3D G3DSA:3.90.550.10 1 253 9.2E-70 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Trad_1263 315d7709b8f0bacd2449237d2e2b4164 256 SUPERFAMILY SSF53448 3 248 8.97E-60 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Trad_0106 eee30ef29b13b69e724312b74324d502 324 Gene3D G3DSA:1.10.620.20 2 298 1.8E-45 T 15-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 Trad_0106 eee30ef29b13b69e724312b74324d502 324 SUPERFAMILY SSF47240 8 322 4.36E-50 T 15-10-2018 IPR009078 Ferritin-like superfamily Trad_0106 eee30ef29b13b69e724312b74324d502 324 Pfam PF00268 Ribonucleotide reductase, small chain 8 278 1.7E-36 T 15-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Trad_2313 a07080a01a628d39f0cdf3df96753742 326 Pfam PF13280 WYL domain 134 318 1.5E-35 T 15-10-2018 IPR026881 WYL domain Trad_2313 a07080a01a628d39f0cdf3df96753742 326 Gene3D G3DSA:1.10.10.10 2 67 1.0E-8 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Trad_2313 a07080a01a628d39f0cdf3df96753742 326 Pfam PF08279 HTH domain 16 61 1.5E-8 T 15-10-2018 IPR013196 Helix-turn-helix, type 11 Trad_2313 a07080a01a628d39f0cdf3df96753742 326 SUPERFAMILY SSF46785 12 65 2.92E-7 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Trad_2476 4280cefd98a5326d96395d4e726c8f3c 1133 Gene3D G3DSA:2.40.50.150 722 849 0.0 T 15-10-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Trad_2476 4280cefd98a5326d96395d4e726c8f3c 1133 Pfam PF04560 RNA polymerase Rpb2, domain 7 1043 1117 6.0E-26 T 15-10-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Trad_2476 4280cefd98a5326d96395d4e726c8f3c 1133 Gene3D G3DSA:2.30.150.10 488 554 0.0 T 15-10-2018 Trad_2476 4280cefd98a5326d96395d4e726c8f3c 1133 Gene3D G3DSA:3.90.1100.10 10 611 0.0 T 15-10-2018 Trad_2476 4280cefd98a5326d96395d4e726c8f3c 1133 Pfam PF10385 RNA polymerase beta subunit external 1 domain 485 550 2.1E-24 T 15-10-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Trad_2476 4280cefd98a5326d96395d4e726c8f3c 1133 Pfam PF04561 RNA polymerase Rpb2, domain 2 144 348 6.6E-17 T 15-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Trad_2476 4280cefd98a5326d96395d4e726c8f3c 1133 Gene3D G3DSA:2.40.270.10 8 1019 0.0 T 15-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Trad_2476 4280cefd98a5326d96395d4e726c8f3c 1133 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 5 1119 11.863 T 15-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Trad_2476 4280cefd98a5326d96395d4e726c8f3c 1133 Pfam PF04563 RNA polymerase beta subunit 18 392 7.9E-31 T 15-10-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Trad_2476 4280cefd98a5326d96395d4e726c8f3c 1133 ProSitePatterns PS01166 RNA polymerases beta chain signature. 851 863 - T 15-10-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Trad_2476 4280cefd98a5326d96395d4e726c8f3c 1133 SUPERFAMILY SSF64484 5 1120 0.0 T 15-10-2018 Trad_2476 4280cefd98a5326d96395d4e726c8f3c 1133 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 221 823 1.4E-270 T 15-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Trad_2476 4280cefd98a5326d96395d4e726c8f3c 1133 Pfam PF00562 RNA polymerase Rpb2, domain 6 611 1041 6.6E-156 T 15-10-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Trad_2476 4280cefd98a5326d96395d4e726c8f3c 1133 Gene3D G3DSA:3.90.1800.10 1029 1081 7.5E-11 T 15-10-2018 Trad_2476 4280cefd98a5326d96395d4e726c8f3c 1133 Pfam PF04565 RNA polymerase Rpb2, domain 3 407 475 3.2E-29 T 15-10-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Trad_2476 4280cefd98a5326d96395d4e726c8f3c 1133 Gene3D G3DSA:3.90.1110.10 149 342 0.0 T 15-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Trad_2476 4280cefd98a5326d96395d4e726c8f3c 1133 Gene3D G3DSA:2.40.50.100 612 686 0.0 T 15-10-2018 Trad_1343 88547a1d1fe8aebbb29896103dbfa342 740 Gene3D G3DSA:3.30.1360.200 113 232 2.3E-55 T 15-10-2018 Trad_1343 88547a1d1fe8aebbb29896103dbfa342 740 Pfam PF07549 SecD/SecF GG Motif 448 468 0.012 T 15-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site Trad_1343 88547a1d1fe8aebbb29896103dbfa342 740 Pfam PF07549 SecD/SecF GG Motif 33 53 4.3E-4 T 15-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site Trad_1343 88547a1d1fe8aebbb29896103dbfa342 740 PRINTS PR01755 Bacterial translocase SecF protein signature 629 647 4.0E-20 T 15-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Trad_1343 88547a1d1fe8aebbb29896103dbfa342 740 PRINTS PR01755 Bacterial translocase SecF protein signature 450 465 4.0E-20 T 15-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Trad_1343 88547a1d1fe8aebbb29896103dbfa342 740 PRINTS PR01755 Bacterial translocase SecF protein signature 579 593 4.0E-20 T 15-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Trad_1343 88547a1d1fe8aebbb29896103dbfa342 740 PRINTS PR01755 Bacterial translocase SecF protein signature 661 676 4.0E-20 T 15-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Trad_1343 88547a1d1fe8aebbb29896103dbfa342 740 Gene3D G3DSA:1.20.1640.10 249 410 2.1E-14 T 15-10-2018 Trad_1343 88547a1d1fe8aebbb29896103dbfa342 740 Gene3D G3DSA:1.20.1640.10 551 732 1.6E-15 T 15-10-2018 Trad_1343 88547a1d1fe8aebbb29896103dbfa342 740 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 452 712 1.1E-65 T 15-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 Trad_1343 88547a1d1fe8aebbb29896103dbfa342 740 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 36 401 6.2E-112 T 15-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 Trad_1343 88547a1d1fe8aebbb29896103dbfa342 740 Gene3D G3DSA:3.30.70.1430 462 505 2.1E-14 T 15-10-2018 Trad_1343 88547a1d1fe8aebbb29896103dbfa342 740 SUPERFAMILY SSF82866 211 406 1.83E-34 T 15-10-2018 Trad_1343 88547a1d1fe8aebbb29896103dbfa342 740 Gene3D G3DSA:3.30.70.3400 52 233 2.3E-55 T 15-10-2018 Trad_1343 88547a1d1fe8aebbb29896103dbfa342 740 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 423 724 26.228 T 15-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 Trad_1343 88547a1d1fe8aebbb29896103dbfa342 740 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 170 393 8.5E-65 T 15-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Trad_1343 88547a1d1fe8aebbb29896103dbfa342 740 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 528 710 5.0E-52 T 15-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Trad_1343 88547a1d1fe8aebbb29896103dbfa342 740 Gene3D G3DSA:1.20.1640.10 411 461 2.1E-14 T 15-10-2018 Trad_1343 88547a1d1fe8aebbb29896103dbfa342 740 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 1 416 36.481 T 15-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 Trad_1343 88547a1d1fe8aebbb29896103dbfa342 740 SUPERFAMILY SSF82866 519 724 1.22E-38 T 15-10-2018 Trad_1343 88547a1d1fe8aebbb29896103dbfa342 740 Pfam PF02355 Protein export membrane protein 235 392 3.1E-13 T 15-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial Trad_1343 88547a1d1fe8aebbb29896103dbfa342 740 Pfam PF02355 Protein export membrane protein 544 722 5.2E-61 T 15-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial Trad_2083 c020870489f4a8030dceefc20fec4ac4 842 SUPERFAMILY SSF55008 79 144 2.62E-20 T 15-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 Trad_2083 c020870489f4a8030dceefc20fec4ac4 842 SUPERFAMILY SSF55008 8 77 1.96E-20 T 15-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 Trad_2083 c020870489f4a8030dceefc20fec4ac4 842 SUPERFAMILY SSF56784 508 816 5.45E-61 T 15-10-2018 IPR036412 HAD-like superfamily Trad_2083 c020870489f4a8030dceefc20fec4ac4 842 PRINTS PR00942 Copper-transporting ATPase 1 signature 37 60 4.1E-12 T 15-10-2018 Trad_2083 c020870489f4a8030dceefc20fec4ac4 842 PRINTS PR00942 Copper-transporting ATPase 1 signature 224 249 4.1E-12 T 15-10-2018 Trad_2083 c020870489f4a8030dceefc20fec4ac4 842 PRINTS PR00942 Copper-transporting ATPase 1 signature 204 224 4.1E-12 T 15-10-2018 Trad_2083 c020870489f4a8030dceefc20fec4ac4 842 PRINTS PR00942 Copper-transporting ATPase 1 signature 11 36 4.1E-12 T 15-10-2018 Trad_2083 c020870489f4a8030dceefc20fec4ac4 842 Pfam PF00702 haloacid dehalogenase-like hydrolase 507 723 5.6E-45 T 15-10-2018 Trad_2083 c020870489f4a8030dceefc20fec4ac4 842 Gene3D G3DSA:3.40.50.1000 491 761 3.8E-92 T 15-10-2018 IPR023214 HAD superfamily Trad_2083 c020870489f4a8030dceefc20fec4ac4 842 SUPERFAMILY SSF81653 312 408 2.22E-30 T 15-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 Trad_2083 c020870489f4a8030dceefc20fec4ac4 842 Gene3D G3DSA:2.70.150.20 301 413 8.0E-44 T 15-10-2018 Trad_2083 c020870489f4a8030dceefc20fec4ac4 842 Pfam PF00403 Heavy-metal-associated domain 82 142 2.9E-16 T 15-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 Trad_2083 c020870489f4a8030dceefc20fec4ac4 842 Pfam PF00403 Heavy-metal-associated domain 16 73 1.4E-15 T 15-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 Trad_2083 c020870489f4a8030dceefc20fec4ac4 842 ProSitePatterns PS01047 Heavy-metal-associated domain. 16 45 - T 15-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 Trad_2083 c020870489f4a8030dceefc20fec4ac4 842 Gene3D G3DSA:3.40.1110.10 521 641 3.8E-92 T 15-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 Trad_2083 c020870489f4a8030dceefc20fec4ac4 842 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 241 818 5.6E-196 T 15-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 Trad_2083 c020870489f4a8030dceefc20fec4ac4 842 ProSitePatterns PS01047 Heavy-metal-associated domain. 84 113 - T 15-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 Trad_2083 c020870489f4a8030dceefc20fec4ac4 842 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 732 744 3.9E-29 T 15-10-2018 Trad_2083 c020870489f4a8030dceefc20fec4ac4 842 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 656 666 3.9E-29 T 15-10-2018 Trad_2083 c020870489f4a8030dceefc20fec4ac4 842 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 709 728 3.9E-29 T 15-10-2018 Trad_2083 c020870489f4a8030dceefc20fec4ac4 842 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 510 524 3.9E-29 T 15-10-2018 Trad_2083 c020870489f4a8030dceefc20fec4ac4 842 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 634 645 3.9E-29 T 15-10-2018 Trad_2083 c020870489f4a8030dceefc20fec4ac4 842 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 358 372 3.9E-29 T 15-10-2018 Trad_2083 c020870489f4a8030dceefc20fec4ac4 842 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 223 819 5.3E-186 T 15-10-2018 Trad_2083 c020870489f4a8030dceefc20fec4ac4 842 Gene3D G3DSA:3.30.70.100 9 75 4.3E-21 T 15-10-2018 Trad_2083 c020870489f4a8030dceefc20fec4ac4 842 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 80 143 1.1E-9 T 15-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 Trad_2083 c020870489f4a8030dceefc20fec4ac4 842 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 14 74 8.7E-13 T 15-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 Trad_2083 c020870489f4a8030dceefc20fec4ac4 842 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 280 786 4.2E-95 T 15-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Trad_2083 c020870489f4a8030dceefc20fec4ac4 842 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 512 518 - T 15-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 Trad_2083 c020870489f4a8030dceefc20fec4ac4 842 Gene3D G3DSA:3.30.70.100 76 149 4.9E-21 T 15-10-2018 Trad_2083 c020870489f4a8030dceefc20fec4ac4 842 Pfam PF00122 E1-E2 ATPase 309 489 2.0E-58 T 15-10-2018 Trad_2083 c020870489f4a8030dceefc20fec4ac4 842 SUPERFAMILY SSF81665 271 785 9.55E-13 T 15-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 Trad_0317 beef1e3adce3b71e264aad8681258804 369 Gene3D G3DSA:3.30.420.40 33 352 4.9E-95 T 15-10-2018 Trad_0317 beef1e3adce3b71e264aad8681258804 369 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 68 86 1.2E-30 T 15-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Trad_0317 beef1e3adce3b71e264aad8681258804 369 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 211 231 1.2E-30 T 15-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Trad_0317 beef1e3adce3b71e264aad8681258804 369 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 156 175 1.2E-30 T 15-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Trad_0317 beef1e3adce3b71e264aad8681258804 369 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 328 354 1.2E-30 T 15-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Trad_0317 beef1e3adce3b71e264aad8681258804 369 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 88 111 1.2E-30 T 15-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Trad_0317 beef1e3adce3b71e264aad8681258804 369 Gene3D G3DSA:3.30.420.40 178 345 4.9E-95 T 15-10-2018 Trad_0317 beef1e3adce3b71e264aad8681258804 369 Gene3D G3DSA:3.90.640.10 210 287 4.9E-95 T 15-10-2018 Trad_0317 beef1e3adce3b71e264aad8681258804 369 SUPERFAMILY SSF53067 32 172 2.75E-21 T 15-10-2018 Trad_0317 beef1e3adce3b71e264aad8681258804 369 Pfam PF06723 MreB/Mbl protein 32 358 2.2E-95 T 15-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Trad_0317 beef1e3adce3b71e264aad8681258804 369 SUPERFAMILY SSF53067 174 358 2.15E-37 T 15-10-2018 Trad_0441 fc95f158b6b3b1a9f2b8ad428aa9cd2c 135 Gene3D G3DSA:3.40.140.10 6 133 9.5E-46 T 15-10-2018 Trad_0441 fc95f158b6b3b1a9f2b8ad428aa9cd2c 135 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 11 108 1.5E-13 T 15-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain Trad_0441 fc95f158b6b3b1a9f2b8ad428aa9cd2c 135 TIGRFAM TIGR01354 cyt_deam_tetra: cytidine deaminase 10 131 5.1E-43 T 15-10-2018 IPR006262 Cytidine deaminase, homotetrameric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199|Reactome: R-HSA-6798695|Reactome: R-HSA-73614 Trad_0441 fc95f158b6b3b1a9f2b8ad428aa9cd2c 135 SUPERFAMILY SSF53927 10 130 9.7E-42 T 15-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 Trad_0441 fc95f158b6b3b1a9f2b8ad428aa9cd2c 135 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 58 98 - T 15-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 Trad_2773 17a7ee740ad1e9632d1c8ca5a2e6796d 465 SMART SM00091 132 203 5.6E-5 T 15-10-2018 IPR000014 PAS domain Trad_2773 17a7ee740ad1e9632d1c8ca5a2e6796d 465 SMART SM00091 8 81 3.7E-6 T 15-10-2018 IPR000014 PAS domain Trad_2773 17a7ee740ad1e9632d1c8ca5a2e6796d 465 SUPERFAMILY SSF55785 17 122 1.77E-28 T 15-10-2018 IPR035965 PAS domain superfamily Trad_2773 17a7ee740ad1e9632d1c8ca5a2e6796d 465 Gene3D G3DSA:3.30.565.10 333 464 1.9E-23 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Trad_2773 17a7ee740ad1e9632d1c8ca5a2e6796d 465 Pfam PF13426 PAS domain 29 122 7.8E-21 T 15-10-2018 IPR000014 PAS domain Trad_2773 17a7ee740ad1e9632d1c8ca5a2e6796d 465 Pfam PF13426 PAS domain 158 250 5.0E-18 T 15-10-2018 IPR000014 PAS domain Trad_2773 17a7ee740ad1e9632d1c8ca5a2e6796d 465 SMART SM00086 209 251 9.7E-10 T 15-10-2018 IPR001610 PAC motif Trad_2773 17a7ee740ad1e9632d1c8ca5a2e6796d 465 SMART SM00086 83 124 3.2E-8 T 15-10-2018 IPR001610 PAC motif Trad_2773 17a7ee740ad1e9632d1c8ca5a2e6796d 465 SMART SM00387 370 465 2.4E-6 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Trad_2773 17a7ee740ad1e9632d1c8ca5a2e6796d 465 Gene3D G3DSA:3.30.450.20 134 293 2.1E-44 T 15-10-2018 Trad_2773 17a7ee740ad1e9632d1c8ca5a2e6796d 465 Gene3D G3DSA:3.30.450.20 3 133 5.1E-50 T 15-10-2018 Trad_2773 17a7ee740ad1e9632d1c8ca5a2e6796d 465 SUPERFAMILY SSF55874 350 460 3.27E-17 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Trad_2773 17a7ee740ad1e9632d1c8ca5a2e6796d 465 SUPERFAMILY SSF55785 139 251 3.07E-28 T 15-10-2018 IPR035965 PAS domain superfamily Trad_2773 17a7ee740ad1e9632d1c8ca5a2e6796d 465 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 373 461 2.2E-8 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Trad_2773 17a7ee740ad1e9632d1c8ca5a2e6796d 465 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 5 130 3.6E-19 T 15-10-2018 IPR000014 PAS domain Trad_2773 17a7ee740ad1e9632d1c8ca5a2e6796d 465 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 130 257 9.3E-21 T 15-10-2018 IPR000014 PAS domain Trad_2773 17a7ee740ad1e9632d1c8ca5a2e6796d 465 Pfam PF07730 Histidine kinase 265 330 8.0E-11 T 15-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 Trad_0849 8c2c6d3c05a34017d2f8a7d0ac809572 332 SUPERFAMILY SSF51735 3 156 2.43E-50 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_0849 8c2c6d3c05a34017d2f8a7d0ac809572 332 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 6 123 2.0E-22 T 15-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 Trad_0849 8c2c6d3c05a34017d2f8a7d0ac809572 332 Gene3D G3DSA:3.40.50.720 1 122 1.5E-35 T 15-10-2018 Trad_0849 8c2c6d3c05a34017d2f8a7d0ac809572 332 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 138 202 1.1E-4 T 15-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 Trad_0849 8c2c6d3c05a34017d2f8a7d0ac809572 332 Gene3D G3DSA:3.30.360.10 124 328 7.7E-51 T 15-10-2018 Trad_0849 8c2c6d3c05a34017d2f8a7d0ac809572 332 SUPERFAMILY SSF55347 130 296 1.08E-38 T 15-10-2018 Trad_0457 28d03ebd290d6fe610922d64e42823cb 250 SUPERFAMILY SSF51351 2 248 9.95E-86 T 15-10-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Trad_0457 28d03ebd290d6fe610922d64e42823cb 250 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 1 249 55.736 T 15-10-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Trad_0457 28d03ebd290d6fe610922d64e42823cb 250 Gene3D G3DSA:3.20.20.70 1 250 5.9E-94 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Trad_0457 28d03ebd290d6fe610922d64e42823cb 250 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 4 240 1.1E-58 T 15-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Trad_0457 28d03ebd290d6fe610922d64e42823cb 250 ProSitePatterns PS00171 Triosephosphate isomerase active site. 166 176 - T 15-10-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Trad_0457 28d03ebd290d6fe610922d64e42823cb 250 Pfam PF00121 Triosephosphate isomerase 4 246 4.6E-84 T 15-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Trad_2599 58535d52005642b98e6fc4b3db72bae9 418 SMART SM01209 100 286 5.8E-109 T 15-10-2018 Trad_2599 58535d52005642b98e6fc4b3db72bae9 418 SUPERFAMILY SSF52440 2 100 7.48E-29 T 15-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Trad_2599 58535d52005642b98e6fc4b3db72bae9 418 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 2 99 6.2E-30 T 15-10-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Trad_2599 58535d52005642b98e6fc4b3db72bae9 418 Gene3D G3DSA:3.40.50.20 1 92 1.8E-32 T 15-10-2018 Trad_2599 58535d52005642b98e6fc4b3db72bae9 418 SUPERFAMILY SSF51246 320 410 9.42E-25 T 15-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 Trad_2599 58535d52005642b98e6fc4b3db72bae9 418 Gene3D G3DSA:3.90.600.10 321 411 2.2E-29 T 15-10-2018 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Trad_2599 58535d52005642b98e6fc4b3db72bae9 418 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 412 39.837 T 15-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Trad_2599 58535d52005642b98e6fc4b3db72bae9 418 Gene3D G3DSA:3.30.1490.20 119 181 9.5E-17 T 15-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Trad_2599 58535d52005642b98e6fc4b3db72bae9 418 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 100 286 3.0E-67 T 15-10-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Trad_2599 58535d52005642b98e6fc4b3db72bae9 418 SMART SM01210 320 412 2.9E-35 T 15-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Trad_2599 58535d52005642b98e6fc4b3db72bae9 418 SUPERFAMILY SSF56059 101 315 6.89E-58 T 15-10-2018 Trad_2599 58535d52005642b98e6fc4b3db72bae9 418 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 2 410 1.0E-143 T 15-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Trad_2599 58535d52005642b98e6fc4b3db72bae9 418 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 322 409 8.8E-25 T 15-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Trad_2599 58535d52005642b98e6fc4b3db72bae9 418 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 280 287 - T 15-10-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Trad_2599 58535d52005642b98e6fc4b3db72bae9 418 Gene3D G3DSA:3.30.470.20 182 320 1.9E-55 T 15-10-2018 Trad_2077 66ec83168b7f43cee9cfd112f441b34a 223 SUPERFAMILY SSF53254 4 195 3.14E-51 T 15-10-2018 IPR029033 Histidine phosphatase superfamily Trad_2077 66ec83168b7f43cee9cfd112f441b34a 223 SMART SM00855 3 149 3.4E-23 T 15-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Trad_2077 66ec83168b7f43cee9cfd112f441b34a 223 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 5 189 3.0E-50 T 15-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Trad_2077 66ec83168b7f43cee9cfd112f441b34a 223 PIRSF PIRSF000709 1 162 2.6E-12 T 15-10-2018 Trad_2077 66ec83168b7f43cee9cfd112f441b34a 223 Gene3D G3DSA:3.40.50.1240 1 201 5.4E-51 T 15-10-2018 IPR029033 Histidine phosphatase superfamily Trad_2501 4d670942ea9a6afc5c64c0a77f05623d 208 Pfam PF01330 RuvA N terminal domain 13 72 1.8E-13 T 15-10-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 Trad_2501 4d670942ea9a6afc5c64c0a77f05623d 208 Pfam PF14520 Helix-hairpin-helix domain 82 139 4.5E-15 T 15-10-2018 Trad_2501 4d670942ea9a6afc5c64c0a77f05623d 208 SUPERFAMILY SSF50249 13 73 4.11E-9 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold Trad_2501 4d670942ea9a6afc5c64c0a77f05623d 208 SMART SM00278 118 137 3.3 T 15-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Trad_2501 4d670942ea9a6afc5c64c0a77f05623d 208 SMART SM00278 83 102 13.0 T 15-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Trad_2501 4d670942ea9a6afc5c64c0a77f05623d 208 Pfam PF07499 RuvA, C-terminal domain 162 207 9.7E-11 T 15-10-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 Trad_2501 4d670942ea9a6afc5c64c0a77f05623d 208 SUPERFAMILY SSF46929 161 207 1.7E-9 T 15-10-2018 IPR036267 RuvA, C-terminal domain superfamily Trad_2501 4d670942ea9a6afc5c64c0a77f05623d 208 SUPERFAMILY SSF47781 79 144 1.16E-18 T 15-10-2018 IPR010994 RuvA domain 2-like Trad_2501 4d670942ea9a6afc5c64c0a77f05623d 208 Gene3D G3DSA:1.10.150.20 75 149 5.1E-22 T 15-10-2018 Trad_2501 4d670942ea9a6afc5c64c0a77f05623d 208 Gene3D G3DSA:1.10.8.10 157 208 1.7E-14 T 15-10-2018 Trad_2501 4d670942ea9a6afc5c64c0a77f05623d 208 Gene3D G3DSA:2.40.50.140 12 74 3.9E-15 T 15-10-2018 Trad_2501 4d670942ea9a6afc5c64c0a77f05623d 208 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 12 208 26.663 T 15-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 Trad_2501 4d670942ea9a6afc5c64c0a77f05623d 208 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 12 207 6.7E-41 T 15-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 Trad_1063 d2a0d4b3ddc6378267f5c54cfeb27125 126 Gene3D G3DSA:1.10.8.50 1 72 6.4E-31 T 15-10-2018 Trad_1063 d2a0d4b3ddc6378267f5c54cfeb27125 126 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 119 27.332 T 15-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Trad_1063 d2a0d4b3ddc6378267f5c54cfeb27125 126 PIRSF PIRSF002134 1 125 8.2E-44 T 15-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Trad_1063 d2a0d4b3ddc6378267f5c54cfeb27125 126 Pfam PF00416 Ribosomal protein S13/S18 3 109 4.3E-32 T 15-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Trad_1063 d2a0d4b3ddc6378267f5c54cfeb27125 126 Gene3D G3DSA:4.10.910.10 73 126 2.4E-26 T 15-10-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Trad_1063 d2a0d4b3ddc6378267f5c54cfeb27125 126 ProSitePatterns PS00646 Ribosomal protein S13 signature. 88 101 - T 15-10-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Trad_1063 d2a0d4b3ddc6378267f5c54cfeb27125 126 SUPERFAMILY SSF46946 2 124 7.98E-47 T 15-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 Trad_1063 d2a0d4b3ddc6378267f5c54cfeb27125 126 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 115 1.4E-53 T 15-10-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Trad_1960 506aa4709cf48bc7c88cfc9e72459cc0 435 Gene3D G3DSA:3.90.1150.10 7 427 3.3E-131 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Trad_1960 506aa4709cf48bc7c88cfc9e72459cc0 435 PIRSF PIRSF000521 31 136 4.4E-8 T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Trad_1960 506aa4709cf48bc7c88cfc9e72459cc0 435 PIRSF PIRSF000521 131 434 5.9E-36 T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Trad_1960 506aa4709cf48bc7c88cfc9e72459cc0 435 SUPERFAMILY SSF53383 12 433 1.55E-117 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Trad_1960 506aa4709cf48bc7c88cfc9e72459cc0 435 Gene3D G3DSA:3.40.640.10 68 330 3.3E-131 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Trad_1960 506aa4709cf48bc7c88cfc9e72459cc0 435 Pfam PF00202 Aminotransferase class-III 33 430 2.2E-92 T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Trad_0548 05df5f99c941598ec493b938517e8912 399 Pfam PF01385 Probable transposase 172 279 4.0E-27 T 15-10-2018 IPR001959 Probable transposase, IS891/IS1136/IS1341 Trad_0548 05df5f99c941598ec493b938517e8912 399 TIGRFAM TIGR01766 tspaseT_teng_C: transposase, IS605 OrfB family 246 313 1.7E-8 T 15-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal Trad_0548 05df5f99c941598ec493b938517e8912 399 Pfam PF12323 Helix-turn-helix domain 1 47 5.8E-14 T 15-10-2018 IPR021027 Transposase, putative, helix-turn-helix domain Trad_0548 05df5f99c941598ec493b938517e8912 399 Pfam PF07282 Putative transposase DNA-binding domain 292 358 3.5E-14 T 15-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal Trad_0612 05df5f99c941598ec493b938517e8912 399 Pfam PF01385 Probable transposase 172 279 4.0E-27 T 15-10-2018 IPR001959 Probable transposase, IS891/IS1136/IS1341 Trad_0612 05df5f99c941598ec493b938517e8912 399 TIGRFAM TIGR01766 tspaseT_teng_C: transposase, IS605 OrfB family 246 313 1.7E-8 T 15-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal Trad_0612 05df5f99c941598ec493b938517e8912 399 Pfam PF12323 Helix-turn-helix domain 1 47 5.8E-14 T 15-10-2018 IPR021027 Transposase, putative, helix-turn-helix domain Trad_0612 05df5f99c941598ec493b938517e8912 399 Pfam PF07282 Putative transposase DNA-binding domain 292 358 3.5E-14 T 15-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal Trad_0634 05df5f99c941598ec493b938517e8912 399 Pfam PF01385 Probable transposase 172 279 4.0E-27 T 15-10-2018 IPR001959 Probable transposase, IS891/IS1136/IS1341 Trad_0634 05df5f99c941598ec493b938517e8912 399 TIGRFAM TIGR01766 tspaseT_teng_C: transposase, IS605 OrfB family 246 313 1.7E-8 T 15-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal Trad_0634 05df5f99c941598ec493b938517e8912 399 Pfam PF12323 Helix-turn-helix domain 1 47 5.8E-14 T 15-10-2018 IPR021027 Transposase, putative, helix-turn-helix domain Trad_0634 05df5f99c941598ec493b938517e8912 399 Pfam PF07282 Putative transposase DNA-binding domain 292 358 3.5E-14 T 15-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal Trad_1260 8c61b8c9dac2916f9a74abb0b19308df 522 SUPERFAMILY SSF53649 41 504 4.71E-103 T 15-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 Trad_1260 8c61b8c9dac2916f9a74abb0b19308df 522 PIRSF PIRSF036666 10 519 8.1E-95 T 15-10-2018 IPR012251 N-acetylglucosamine-6-sulfatase GO:0008449|GO:0030203 KEGG: 00531+3.1.6.14|Reactome: R-HSA-2022857|Reactome: R-HSA-2206305|Reactome: R-HSA-432720|Reactome: R-HSA-6798695 Trad_1260 8c61b8c9dac2916f9a74abb0b19308df 522 Gene3D G3DSA:3.40.720.10 41 486 5.2E-101 T 15-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 Trad_1260 8c61b8c9dac2916f9a74abb0b19308df 522 ProSitePatterns PS00523 Sulfatases signature 1. 82 94 - T 15-10-2018 IPR024607 Sulfatase, conserved site Trad_1260 8c61b8c9dac2916f9a74abb0b19308df 522 Pfam PF00884 Sulfatase 42 390 5.1E-53 T 15-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 Trad_0401 0763be43bcc2d4fd02a852ff472f8635 438 Gene3D G3DSA:1.10.1740.10 356 437 1.7E-26 T 15-10-2018 Trad_0401 0763be43bcc2d4fd02a852ff472f8635 438 Pfam PF13288 DXP reductoisomerase C-terminal domain 318 430 2.2E-34 T 15-10-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Trad_0401 0763be43bcc2d4fd02a852ff472f8635 438 SUPERFAMILY SSF55347 185 318 1.83E-49 T 15-10-2018 Trad_0401 0763be43bcc2d4fd02a852ff472f8635 438 SUPERFAMILY SSF69055 348 435 6.93E-27 T 15-10-2018 IPR036169 DXP reductoisomerase, C-terminal domain superfamily KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Trad_0401 0763be43bcc2d4fd02a852ff472f8635 438 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 71 189 3.7E-33 T 15-10-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Trad_0401 0763be43bcc2d4fd02a852ff472f8635 438 SUPERFAMILY SSF51735 67 207 2.07E-36 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_0401 0763be43bcc2d4fd02a852ff472f8635 438 PIRSF PIRSF006205 67 437 5.6E-132 T 15-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Trad_0401 0763be43bcc2d4fd02a852ff472f8635 438 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 70 435 41.879 T 15-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Trad_0401 0763be43bcc2d4fd02a852ff472f8635 438 Gene3D G3DSA:3.40.50.720 62 207 2.8E-42 T 15-10-2018 Trad_0401 0763be43bcc2d4fd02a852ff472f8635 438 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 203 285 4.8E-32 T 15-10-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Trad_0401 0763be43bcc2d4fd02a852ff472f8635 438 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 68 432 1.1E-118 T 15-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Trad_2090 d7b0873a2ec4b961c698f4cc12d1a028 411 SUPERFAMILY SSF50952 42 401 7.06E-37 T 15-10-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 Trad_2090 d7b0873a2ec4b961c698f4cc12d1a028 411 Gene3D G3DSA:2.120.10.30 42 409 6.6E-94 T 15-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like Trad_2090 d7b0873a2ec4b961c698f4cc12d1a028 411 Pfam PF07995 Glucose / Sorbosone dehydrogenase 56 398 4.8E-46 T 15-10-2018 IPR012938 Glucose/Sorbosone dehydrogenase Trad_0023 82d51eb2a95ad6d788429287fbe306a7 91 PRINTS PR00063 Ribosomal protein L27 signature 29 53 7.7E-36 T 15-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_0023 82d51eb2a95ad6d788429287fbe306a7 91 PRINTS PR00063 Ribosomal protein L27 signature 54 78 7.7E-36 T 15-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_0023 82d51eb2a95ad6d788429287fbe306a7 91 PRINTS PR00063 Ribosomal protein L27 signature 4 28 7.7E-36 T 15-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_0023 82d51eb2a95ad6d788429287fbe306a7 91 Pfam PF01016 Ribosomal L27 protein 2 81 1.0E-35 T 15-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_0023 82d51eb2a95ad6d788429287fbe306a7 91 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 15-10-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Trad_0023 82d51eb2a95ad6d788429287fbe306a7 91 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 81 4.0E-15 T 15-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_0023 82d51eb2a95ad6d788429287fbe306a7 91 SUPERFAMILY SSF110324 2 81 1.99E-32 T 15-10-2018 Trad_0023 82d51eb2a95ad6d788429287fbe306a7 91 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 84 27.367 T 15-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_0023 82d51eb2a95ad6d788429287fbe306a7 91 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 77 1.6E-36 T 15-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_0023 82d51eb2a95ad6d788429287fbe306a7 91 Gene3D G3DSA:2.40.50.100 21 91 9.4E-31 T 15-10-2018 Trad_1318 167ea8c3c03506afb0745f25980fd184 501 Gene3D G3DSA:3.40.190.10 11 258 6.2E-68 T 15-10-2018 Trad_1318 167ea8c3c03506afb0745f25980fd184 501 PIRSF PIRSF002741 14 500 2.0E-118 T 15-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Trad_1318 167ea8c3c03506afb0745f25980fd184 501 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 65 417 7.1E-94 T 15-10-2018 IPR000914 Solute-binding protein family 5 domain Trad_1318 167ea8c3c03506afb0745f25980fd184 501 SUPERFAMILY SSF53850 22 496 4.52E-138 T 15-10-2018 Trad_1318 167ea8c3c03506afb0745f25980fd184 501 Gene3D G3DSA:3.10.105.10 259 467 1.1E-61 T 15-10-2018 Trad_0654 8ddba619c1f28d130faa3a9b5321eb36 424 Gene3D G3DSA:3.40.47.10 8 302 3.3E-150 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 Trad_0654 8ddba619c1f28d130faa3a9b5321eb36 424 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 87 105 - T 15-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 Trad_0654 8ddba619c1f28d130faa3a9b5321eb36 424 Pfam PF00108 Thiolase, N-terminal domain 6 288 6.5E-72 T 15-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 Trad_0654 8ddba619c1f28d130faa3a9b5321eb36 424 Gene3D G3DSA:3.40.47.10 144 421 3.3E-150 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 Trad_0654 8ddba619c1f28d130faa3a9b5321eb36 424 ProSitePatterns PS00737 Thiolases signature 2. 365 381 - T 15-10-2018 IPR020613 Thiolase, conserved site GO:0016747 Trad_0654 8ddba619c1f28d130faa3a9b5321eb36 424 Pfam PF02803 Thiolase, C-terminal domain 297 423 2.2E-41 T 15-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 Trad_0654 8ddba619c1f28d130faa3a9b5321eb36 424 SUPERFAMILY SSF53901 297 423 1.06E-38 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 Trad_0654 8ddba619c1f28d130faa3a9b5321eb36 424 ProSitePatterns PS00099 Thiolases active site. 405 418 - T 15-10-2018 IPR020610 Thiolase, active site GO:0016747 Trad_0654 8ddba619c1f28d130faa3a9b5321eb36 424 PIRSF PIRSF000429 1 424 2.1E-125 T 15-10-2018 IPR002155 Thiolase GO:0016747 Trad_0654 8ddba619c1f28d130faa3a9b5321eb36 424 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 8 422 2.6E-130 T 15-10-2018 IPR002155 Thiolase GO:0016747 Trad_0654 8ddba619c1f28d130faa3a9b5321eb36 424 SUPERFAMILY SSF53901 5 295 2.51E-79 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 Trad_1622 5351f67a0741b7e8c145963c01e0337d 726 Gene3D G3DSA:3.30.230.70 240 556 5.1E-111 T 15-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Trad_1622 5351f67a0741b7e8c145963c01e0337d 726 Pfam PF01138 3' exoribonuclease family, domain 1 331 463 1.5E-19 T 15-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Trad_1622 5351f67a0741b7e8c145963c01e0337d 726 Pfam PF01138 3' exoribonuclease family, domain 1 16 145 9.1E-17 T 15-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Trad_1622 5351f67a0741b7e8c145963c01e0337d 726 SUPERFAMILY SSF54791 559 634 7.59E-12 T 15-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 Trad_1622 5351f67a0741b7e8c145963c01e0337d 726 SUPERFAMILY SSF54211 299 494 7.09E-48 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Trad_1622 5351f67a0741b7e8c145963c01e0337d 726 SUPERFAMILY SSF55666 146 237 1.44E-23 T 15-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Trad_1622 5351f67a0741b7e8c145963c01e0337d 726 Gene3D G3DSA:3.30.1370.10 557 627 6.3E-16 T 15-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 Trad_1622 5351f67a0741b7e8c145963c01e0337d 726 SUPERFAMILY SSF55666 457 556 7.33E-28 T 15-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Trad_1622 5351f67a0741b7e8c145963c01e0337d 726 Pfam PF00575 S1 RNA binding domain 625 691 1.9E-16 T 15-10-2018 IPR003029 S1 domain GO:0003676 Trad_1622 5351f67a0741b7e8c145963c01e0337d 726 Pfam PF00013 KH domain 563 619 2.1E-9 T 15-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 Trad_1622 5351f67a0741b7e8c145963c01e0337d 726 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 252 326 1.3E-6 T 15-10-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 Trad_1622 5351f67a0741b7e8c145963c01e0337d 726 SMART SM00322 559 623 1.6E-10 T 15-10-2018 IPR004087 K Homology domain GO:0003676 Trad_1622 5351f67a0741b7e8c145963c01e0337d 726 Pfam PF03725 3' exoribonuclease family, domain 2 149 211 1.8E-10 T 15-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Trad_1622 5351f67a0741b7e8c145963c01e0337d 726 Pfam PF03725 3' exoribonuclease family, domain 2 467 534 1.1E-6 T 15-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Trad_1622 5351f67a0741b7e8c145963c01e0337d 726 SUPERFAMILY SSF50249 613 693 1.54E-18 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold Trad_1622 5351f67a0741b7e8c145963c01e0337d 726 PIRSF PIRSF005499 4 715 1.7E-279 T 15-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 Trad_1622 5351f67a0741b7e8c145963c01e0337d 726 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 5 699 28.538 T 15-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 Trad_1622 5351f67a0741b7e8c145963c01e0337d 726 SMART SM00316 626 696 5.7E-21 T 15-10-2018 IPR022967 RNA-binding domain, S1 Trad_1622 5351f67a0741b7e8c145963c01e0337d 726 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 13 696 1.5E-292 T 15-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 Trad_1622 5351f67a0741b7e8c145963c01e0337d 726 SUPERFAMILY SSF54211 10 145 2.08E-42 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Trad_1622 5351f67a0741b7e8c145963c01e0337d 726 Gene3D G3DSA:3.30.230.70 2 231 3.3E-73 T 15-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Trad_1622 5351f67a0741b7e8c145963c01e0337d 726 Gene3D G3DSA:2.40.50.140 628 698 6.7E-25 T 15-10-2018 Trad_2787 3cbc6a306b3684d7af2cf83f11e94676 184 Gene3D G3DSA:3.30.1360.40 30 104 3.7E-66 T 15-10-2018 Trad_2787 3cbc6a306b3684d7af2cf83f11e94676 184 Gene3D G3DSA:1.10.132.20 11 181 3.7E-66 T 15-10-2018 Trad_2787 3cbc6a306b3684d7af2cf83f11e94676 184 Hamap MF_00040 Ribosome-recycling factor [frr]. 2 184 26.838 T 15-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 Trad_2787 3cbc6a306b3684d7af2cf83f11e94676 184 SUPERFAMILY SSF55194 2 184 9.68E-67 T 15-10-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 Trad_2787 3cbc6a306b3684d7af2cf83f11e94676 184 Pfam PF01765 Ribosome recycling factor 19 182 4.3E-62 T 15-10-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 Trad_2787 3cbc6a306b3684d7af2cf83f11e94676 184 TIGRFAM TIGR00496 frr: ribosome recycling factor 10 184 2.3E-66 T 15-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 Trad_1103 8a754980d399bc7867fdeaaa8ac787e6 466 Gene3D G3DSA:3.40.50.150 94 403 8.0E-86 T 15-10-2018 Trad_1103 8a754980d399bc7867fdeaaa8ac787e6 466 SUPERFAMILY SSF53335 2 304 9.87E-62 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Trad_1103 8a754980d399bc7867fdeaaa8ac787e6 466 Gene3D G3DSA:2.30.130.60 408 465 3.6E-17 T 15-10-2018 Trad_1103 8a754980d399bc7867fdeaaa8ac787e6 466 Gene3D G3DSA:3.30.70.3130 2 93 3.2E-25 T 15-10-2018 Trad_1103 8a754980d399bc7867fdeaaa8ac787e6 466 Pfam PF01189 16S rRNA methyltransferase RsmB/F 99 302 2.9E-46 T 15-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 Trad_1103 8a754980d399bc7867fdeaaa8ac787e6 466 Pfam PF17126 RsmF rRNA methyltransferase first C-terminal domain 334 397 6.8E-20 T 15-10-2018 IPR031340 Ribosomal RNA small subunit methyltransferase F, first C-terminal domain Trad_1103 8a754980d399bc7867fdeaaa8ac787e6 466 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 176 188 3.1E-24 T 15-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase Trad_1103 8a754980d399bc7867fdeaaa8ac787e6 466 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 80 94 3.1E-24 T 15-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase Trad_1103 8a754980d399bc7867fdeaaa8ac787e6 466 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 226 242 3.1E-24 T 15-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase Trad_1103 8a754980d399bc7867fdeaaa8ac787e6 466 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 287 304 3.1E-24 T 15-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase Trad_1103 8a754980d399bc7867fdeaaa8ac787e6 466 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 109 119 3.1E-24 T 15-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase Trad_1103 8a754980d399bc7867fdeaaa8ac787e6 466 Pfam PF13636 RNA-binding PUA-like domain of methyltransferase RsmF 419 463 3.0E-14 T 15-10-2018 IPR027391 rRNA small subunit methyltransferase F, RNA-binding PUA-like domain Trad_1103 8a754980d399bc7867fdeaaa8ac787e6 466 Pfam PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF 3 94 2.3E-27 T 15-10-2018 IPR031341 Ribosomal RNA small subunit methyltransferase F, N-terminal Reactome: R-HSA-6790901|Reactome: R-HSA-8869496 Trad_2485 2f018f51854161b6e4bbc46334f8c243 583 SUPERFAMILY SSF47802 11 84 1.31E-8 T 15-10-2018 IPR027421 DNA polymerase lambda lyase domain superfamily Trad_2485 2f018f51854161b6e4bbc46334f8c243 583 SMART SM00481 339 422 1.3E-11 T 15-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal Trad_2485 2f018f51854161b6e4bbc46334f8c243 583 SUPERFAMILY SSF81301 172 322 1.57E-14 T 15-10-2018 Trad_2485 2f018f51854161b6e4bbc46334f8c243 583 Pfam PF14716 Helix-hairpin-helix domain 17 81 5.2E-12 T 15-10-2018 IPR010996 DNA polymerase beta-like, N-terminal domain Trad_2485 2f018f51854161b6e4bbc46334f8c243 583 SMART SM00483 16 322 0.0014 T 15-10-2018 IPR002054 DNA-directed DNA polymerase X GO:0003677|GO:0003887 Trad_2485 2f018f51854161b6e4bbc46334f8c243 583 SUPERFAMILY SSF158702 71 147 2.22E-5 T 15-10-2018 Trad_2485 2f018f51854161b6e4bbc46334f8c243 583 Gene3D G3DSA:3.30.210.10 269 325 3.2E-10 T 15-10-2018 IPR037160 DNA polymerase, thumb domain superfamily Trad_2485 2f018f51854161b6e4bbc46334f8c243 583 Pfam PF14791 DNA polymerase beta thumb 262 322 2.9E-8 T 15-10-2018 IPR029398 DNA polymerase beta, thumb domain Trad_2485 2f018f51854161b6e4bbc46334f8c243 583 SMART SM00278 64 83 140.0 T 15-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Trad_2485 2f018f51854161b6e4bbc46334f8c243 583 SMART SM00278 106 125 1100.0 T 15-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Trad_2485 2f018f51854161b6e4bbc46334f8c243 583 SMART SM00278 140 159 34.0 T 15-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Trad_2485 2f018f51854161b6e4bbc46334f8c243 583 Gene3D G3DSA:1.10.150.110 10 97 1.3E-10 T 15-10-2018 IPR027421 DNA polymerase lambda lyase domain superfamily Trad_2485 2f018f51854161b6e4bbc46334f8c243 583 PIRSF PIRSF005047 14 577 1.7E-152 T 15-10-2018 IPR022311 Uncharacterised conserved protein UCP005047, YshC KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Trad_2485 2f018f51854161b6e4bbc46334f8c243 583 Gene3D G3DSA:3.30.460.10 177 256 2.7E-8 T 15-10-2018 Trad_2485 2f018f51854161b6e4bbc46334f8c243 583 Pfam PF14520 Helix-hairpin-helix domain 108 161 4.9E-8 T 15-10-2018 Trad_2485 2f018f51854161b6e4bbc46334f8c243 583 Gene3D G3DSA:3.20.20.140 327 578 2.5E-69 T 15-10-2018 Trad_2485 2f018f51854161b6e4bbc46334f8c243 583 Pfam PF02811 PHP domain 342 433 2.3E-6 T 15-10-2018 IPR004013 PHP domain GO:0003824 Trad_2485 2f018f51854161b6e4bbc46334f8c243 583 Gene3D G3DSA:1.10.150.20 101 167 7.7E-16 T 15-10-2018 Trad_2485 2f018f51854161b6e4bbc46334f8c243 583 SUPERFAMILY SSF89550 341 566 3.79E-48 T 15-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 Trad_0831 cdcec3b506d65fe4f9edad483a2a3c97 558 SUPERFAMILY SSF55874 2 204 8.12E-40 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Trad_0831 cdcec3b506d65fe4f9edad483a2a3c97 558 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 97 103 - T 15-10-2018 IPR014762 DNA mismatch repair, conserved site Trad_0831 cdcec3b506d65fe4f9edad483a2a3c97 558 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 25 105 4.1E-9 T 15-10-2018 Trad_0831 cdcec3b506d65fe4f9edad483a2a3c97 558 Gene3D G3DSA:3.30.565.10 2 204 4.8E-48 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Trad_0831 cdcec3b506d65fe4f9edad483a2a3c97 558 Gene3D G3DSA:2.30.42.20 361 535 1.6E-42 T 15-10-2018 Trad_0831 cdcec3b506d65fe4f9edad483a2a3c97 558 Pfam PF08676 MutL C terminal dimerisation domain 357 495 8.8E-28 T 15-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 Trad_0831 cdcec3b506d65fe4f9edad483a2a3c97 558 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 214 328 6.1E-24 T 15-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 Trad_0831 cdcec3b506d65fe4f9edad483a2a3c97 558 Gene3D G3DSA:3.30.230.10 215 328 9.7E-20 T 15-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Trad_0831 cdcec3b506d65fe4f9edad483a2a3c97 558 SUPERFAMILY SSF54211 199 328 4.55E-23 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Trad_0831 cdcec3b506d65fe4f9edad483a2a3c97 558 SMART SM00853 359 495 3.0E-30 T 15-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 Trad_0831 cdcec3b506d65fe4f9edad483a2a3c97 558 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 2 533 21.586 T 15-10-2018 IPR020667 DNA mismatch repair protein, MutL GO:0006298 Trad_0831 cdcec3b506d65fe4f9edad483a2a3c97 558 SUPERFAMILY SSF118116 354 535 1.7E-35 T 15-10-2018 IPR037198 MutL, C-terminal domain superfamily Trad_0831 cdcec3b506d65fe4f9edad483a2a3c97 558 SMART SM01340 210 329 6.4E-31 T 15-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 Trad_0831 cdcec3b506d65fe4f9edad483a2a3c97 558 Gene3D G3DSA:3.30.1370.100 401 492 1.6E-42 T 15-10-2018 Trad_2932 a8ad6d544886373b3afccab456f6ba40 799 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 15 584 49.44 T 15-10-2018 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 Trad_2932 a8ad6d544886373b3afccab456f6ba40 799 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 374 563 1.3E-55 T 15-10-2018 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Trad_2932 a8ad6d544886373b3afccab456f6ba40 799 Gene3D G3DSA:1.10.150.380 623 730 5.5E-16 T 15-10-2018 Trad_2932 a8ad6d544886373b3afccab456f6ba40 799 SUPERFAMILY SSF52374 56 380 2.08E-91 T 15-10-2018 Trad_2932 a8ad6d544886373b3afccab456f6ba40 799 SUPERFAMILY SSF50715 374 580 4.24E-66 T 15-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Trad_2932 a8ad6d544886373b3afccab456f6ba40 799 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 56 581 1.5E-211 T 15-10-2018 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Trad_2932 a8ad6d544886373b3afccab456f6ba40 799 Gene3D G3DSA:1.10.1160.10 294 373 4.2E-29 T 15-10-2018 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily GO:0005524 Trad_2932 a8ad6d544886373b3afccab456f6ba40 799 SMART SM00845 650 792 3.3E-57 T 15-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 Trad_2932 a8ad6d544886373b3afccab456f6ba40 799 SUPERFAMILY SSF89095 653 792 2.96E-19 T 15-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 Trad_2932 a8ad6d544886373b3afccab456f6ba40 799 Gene3D G3DSA:1.10.10.410 732 794 1.4E-20 T 15-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal Trad_2932 a8ad6d544886373b3afccab456f6ba40 799 Gene3D G3DSA:2.40.240.10 382 499 7.5E-74 T 15-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Trad_2932 a8ad6d544886373b3afccab456f6ba40 799 Gene3D G3DSA:3.90.800.10 128 236 7.1E-98 T 15-10-2018 Trad_2932 a8ad6d544886373b3afccab456f6ba40 799 Pfam PF02637 GatB domain 651 792 4.5E-39 T 15-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 Trad_2932 a8ad6d544886373b3afccab456f6ba40 799 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 56 370 2.0E-100 T 15-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 Trad_2932 a8ad6d544886373b3afccab456f6ba40 799 PRINTS PR00987 Glutamyl-tRNA synthetase signature 88 101 2.2E-8 T 15-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Trad_2932 a8ad6d544886373b3afccab456f6ba40 799 PRINTS PR00987 Glutamyl-tRNA synthetase signature 59 71 2.2E-8 T 15-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Trad_2932 a8ad6d544886373b3afccab456f6ba40 799 PRINTS PR00987 Glutamyl-tRNA synthetase signature 237 247 2.2E-8 T 15-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Trad_2932 a8ad6d544886373b3afccab456f6ba40 799 Gene3D G3DSA:3.40.50.620 56 275 7.1E-98 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Trad_2932 a8ad6d544886373b3afccab456f6ba40 799 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 62 73 - T 15-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Trad_2932 a8ad6d544886373b3afccab456f6ba40 799 Gene3D G3DSA:2.40.240.10 374 580 7.5E-74 T 15-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Trad_0315 75e17ff3aaa9f64402534f092a69f508 260 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 2 249 5.6E-63 T 15-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 Trad_0315 75e17ff3aaa9f64402534f092a69f508 260 SUPERFAMILY SSF54211 2 102 1.59E-22 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Trad_0315 75e17ff3aaa9f64402534f092a69f508 260 Gene3D G3DSA:3.30.1700.10 111 258 1.5E-37 T 15-10-2018 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 Trad_0315 75e17ff3aaa9f64402534f092a69f508 260 Gene3D G3DSA:3.30.230.20 1 102 2.2E-26 T 15-10-2018 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 Trad_0315 75e17ff3aaa9f64402534f092a69f508 260 SUPERFAMILY SSF54211 133 250 2.96E-32 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Trad_1308 0caf2442a1b59e936f48133655710c60 595 Gene3D G3DSA:3.30.70.870 285 366 1.1E-34 T 15-10-2018 Trad_1308 0caf2442a1b59e936f48133655710c60 595 Gene3D G3DSA:3.40.50.300 1 184 7.3E-72 T 15-10-2018 Trad_1308 0caf2442a1b59e936f48133655710c60 595 Pfam PF03144 Elongation factor Tu domain 2 204 274 8.5E-11 T 15-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 Trad_1308 0caf2442a1b59e936f48133655710c60 595 Gene3D G3DSA:3.30.70.2570 478 552 6.2E-35 T 15-10-2018 IPR038363 LepA, C-terminal domain superfamily Trad_1308 0caf2442a1b59e936f48133655710c60 595 SMART SM00838 397 484 1.1E-5 T 15-10-2018 IPR000640 Elongation factor EFG, domain V-like Trad_1308 0caf2442a1b59e936f48133655710c60 595 SUPERFAMILY SSF52540 3 229 1.35E-54 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_1308 0caf2442a1b59e936f48133655710c60 595 Gene3D G3DSA:2.40.30.10 185 284 1.0E-33 T 15-10-2018 Trad_1308 0caf2442a1b59e936f48133655710c60 595 Pfam PF00009 Elongation factor Tu GTP binding domain 2 180 9.4E-53 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Trad_1308 0caf2442a1b59e936f48133655710c60 595 TIGRFAM TIGR01393 lepA: elongation factor 4 2 592 3.4E-289 T 15-10-2018 IPR006297 Elongation factor 4 GO:0005525 Trad_1308 0caf2442a1b59e936f48133655710c60 595 SUPERFAMILY SSF54980 397 492 3.45E-28 T 15-10-2018 IPR035647 EF-G domain III/V-like Trad_1308 0caf2442a1b59e936f48133655710c60 595 Gene3D G3DSA:3.30.70.3380 367 477 3.9E-39 T 15-10-2018 Trad_1308 0caf2442a1b59e936f48133655710c60 595 Hamap MF_00071 Elongation factor 4 [lepA]. 1 595 280.213 T 15-10-2018 IPR006297 Elongation factor 4 GO:0005525 Trad_1308 0caf2442a1b59e936f48133655710c60 595 SUPERFAMILY SSF54980 290 369 7.19E-18 T 15-10-2018 IPR035647 EF-G domain III/V-like Trad_1308 0caf2442a1b59e936f48133655710c60 595 Pfam PF06421 GTP-binding protein LepA C-terminus 486 592 4.2E-50 T 15-10-2018 IPR013842 GTP-binding protein LepA, C-terminal Trad_1308 0caf2442a1b59e936f48133655710c60 595 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 172 5.4E-20 T 15-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Trad_1308 0caf2442a1b59e936f48133655710c60 595 PRINTS PR00315 GTP-binding elongation factor signature 5 18 5.7E-12 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Trad_1308 0caf2442a1b59e936f48133655710c60 595 PRINTS PR00315 GTP-binding elongation factor signature 48 56 5.7E-12 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Trad_1308 0caf2442a1b59e936f48133655710c60 595 PRINTS PR00315 GTP-binding elongation factor signature 73 83 5.7E-12 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Trad_1308 0caf2442a1b59e936f48133655710c60 595 PRINTS PR00315 GTP-binding elongation factor signature 125 134 5.7E-12 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Trad_1308 0caf2442a1b59e936f48133655710c60 595 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 41 56 - T 15-10-2018 IPR031157 Tr-type G domain, conserved site Trad_1308 0caf2442a1b59e936f48133655710c60 595 Pfam PF00679 Elongation factor G C-terminus 397 483 8.3E-25 T 15-10-2018 IPR000640 Elongation factor EFG, domain V-like Trad_2916 b31a38585d1f5875e6e2cc8139fb4134 587 Gene3D G3DSA:2.160.20.10 152 579 9.3E-32 T 15-10-2018 IPR012334 Pectin lyase fold Trad_2916 b31a38585d1f5875e6e2cc8139fb4134 587 SUPERFAMILY SSF51126 161 579 2.51E-32 T 15-10-2018 IPR011050 Pectin lyase fold/virulence factor Trad_1913 4cf08481c44a8e833539bf5d2c46dd68 276 TIGRFAM TIGR01097 PhnE: phosphonate ABC transporter, permease protein PhnE 31 275 9.7E-81 T 15-10-2018 IPR005769 ABC transporter, permease PhnE/PtxC GO:0005887|GO:0015604|GO:0015716 Trad_1913 4cf08481c44a8e833539bf5d2c46dd68 276 Gene3D G3DSA:1.10.3720.10 74 276 2.6E-31 T 15-10-2018 IPR035906 MetI-like superfamily Trad_1913 4cf08481c44a8e833539bf5d2c46dd68 276 SUPERFAMILY SSF161098 81 266 4.19E-34 T 15-10-2018 IPR035906 MetI-like superfamily Trad_1913 4cf08481c44a8e833539bf5d2c46dd68 276 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 104 275 1.5E-16 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Trad_0600 011a329ff8886159effac1ac4823b537 327 SUPERFAMILY SSF52540 18 295 1.5E-43 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_0600 011a329ff8886159effac1ac4823b537 327 PIRSF PIRSF002849 2 322 2.2E-115 T 15-10-2018 Trad_0600 011a329ff8886159effac1ac4823b537 327 Gene3D G3DSA:3.40.50.300 10 210 2.4E-47 T 15-10-2018 Trad_0600 011a329ff8886159effac1ac4823b537 327 Gene3D G3DSA:1.10.8.300 211 319 3.3E-26 T 15-10-2018 Trad_0600 011a329ff8886159effac1ac4823b537 327 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 49 181 5.1E-60 T 15-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 Trad_0600 011a329ff8886159effac1ac4823b537 327 SMART SM00382 46 189 0.0012 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_0896 fb7ae90d5ff11e5e2cec403c4a37ab14 329 SMART SM00612 260 307 7.1E-5 T 15-10-2018 IPR006652 Kelch repeat type 1 GO:0005515 Trad_0896 fb7ae90d5ff11e5e2cec403c4a37ab14 329 SMART SM00612 54 102 0.2 T 15-10-2018 IPR006652 Kelch repeat type 1 GO:0005515 Trad_0896 fb7ae90d5ff11e5e2cec403c4a37ab14 329 SMART SM00612 207 257 3.9E-4 T 15-10-2018 IPR006652 Kelch repeat type 1 GO:0005515 Trad_0896 fb7ae90d5ff11e5e2cec403c4a37ab14 329 SMART SM00612 103 152 2.4E-9 T 15-10-2018 IPR006652 Kelch repeat type 1 GO:0005515 Trad_0896 fb7ae90d5ff11e5e2cec403c4a37ab14 329 SUPERFAMILY SSF50965 32 215 8.37E-28 T 15-10-2018 IPR011043 Galactose oxidase/kelch, beta-propeller Trad_0896 fb7ae90d5ff11e5e2cec403c4a37ab14 329 Gene3D G3DSA:2.120.10.80 28 177 4.5E-30 T 15-10-2018 IPR015915 Kelch-type beta propeller GO:0005515 Trad_0896 fb7ae90d5ff11e5e2cec403c4a37ab14 329 Gene3D G3DSA:2.120.10.80 178 326 1.5E-36 T 15-10-2018 IPR015915 Kelch-type beta propeller GO:0005515 Trad_0896 fb7ae90d5ff11e5e2cec403c4a37ab14 329 Pfam PF13964 Kelch motif 98 142 2.5E-9 T 15-10-2018 Trad_0896 fb7ae90d5ff11e5e2cec403c4a37ab14 329 Pfam PF13964 Kelch motif 251 297 2.9E-6 T 15-10-2018 Trad_0896 fb7ae90d5ff11e5e2cec403c4a37ab14 329 SUPERFAMILY SSF117281 170 317 3.66E-32 T 15-10-2018 IPR015915 Kelch-type beta propeller GO:0005515 Trad_0896 fb7ae90d5ff11e5e2cec403c4a37ab14 329 Pfam PF01344 Kelch motif 195 244 1.2E-8 T 15-10-2018 IPR006652 Kelch repeat type 1 GO:0005515 Trad_2349 ad179aa31c90a00abb3cbe8d8ec028be 608 SMART SM00382 383 569 9.2E-14 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_2349 ad179aa31c90a00abb3cbe8d8ec028be 608 Gene3D G3DSA:1.20.1560.10 9 343 4.8E-74 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Trad_2349 ad179aa31c90a00abb3cbe8d8ec028be 608 SUPERFAMILY SSF90123 24 341 4.45E-66 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Trad_2349 ad179aa31c90a00abb3cbe8d8ec028be 608 Pfam PF00664 ABC transporter transmembrane region 38 311 1.9E-39 T 15-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Trad_2349 ad179aa31c90a00abb3cbe8d8ec028be 608 Gene3D G3DSA:3.40.50.300 354 599 2.1E-84 T 15-10-2018 Trad_2349 ad179aa31c90a00abb3cbe8d8ec028be 608 Pfam PF00005 ABC transporter 377 523 1.5E-29 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Trad_2349 ad179aa31c90a00abb3cbe8d8ec028be 608 SUPERFAMILY SSF52540 350 593 1.67E-82 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_0403 291903fe6af49300d1e50c1cd4462c35 291 Pfam PF01564 Spermine/spermidine synthase domain 69 250 1.6E-50 T 15-10-2018 Trad_0403 291903fe6af49300d1e50c1cd4462c35 291 SUPERFAMILY SSF53335 13 290 6.4E-78 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Trad_0403 291903fe6af49300d1e50c1cd4462c35 291 Gene3D G3DSA:3.40.50.150 66 291 3.7E-70 T 15-10-2018 Trad_0403 291903fe6af49300d1e50c1cd4462c35 291 Pfam PF17284 Spermidine synthase tetramerisation domain 25 66 5.7E-14 T 15-10-2018 IPR035246 Spermidine synthase, tetramerisation domain KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 Trad_0403 291903fe6af49300d1e50c1cd4462c35 291 TIGRFAM TIGR00417 speE: spermidine synthase 23 284 2.2E-88 T 15-10-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 Trad_0403 291903fe6af49300d1e50c1cd4462c35 291 Gene3D G3DSA:2.30.140.10 2 65 2.0E-15 T 15-10-2018 IPR037163 Spermidine synthase, tetramerisation domain superfamily KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 Trad_0403 291903fe6af49300d1e50c1cd4462c35 291 Hamap MF_00198 Polyamine aminopropyltransferase [speE]. 14 290 37.597 T 15-10-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 Trad_0403 291903fe6af49300d1e50c1cd4462c35 291 ProSitePatterns PS01330 Polyamine biosynthesis (PABS) domain signature. 90 103 - T 15-10-2018 IPR030373 Polyamine biosynthesis domain, conserved site KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 Trad_0552 9ff1be04b1b9bc0578f5122071609754 312 Gene3D G3DSA:1.10.8.60 120 184 7.9E-8 T 15-10-2018 Trad_0552 9ff1be04b1b9bc0578f5122071609754 312 SUPERFAMILY SSF48019 186 306 3.83E-18 T 15-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 Trad_0552 9ff1be04b1b9bc0578f5122071609754 312 Gene3D G3DSA:1.20.272.10 185 308 2.4E-24 T 15-10-2018 Trad_0552 9ff1be04b1b9bc0578f5122071609754 312 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 17 305 1.4E-38 T 15-10-2018 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 Trad_0552 9ff1be04b1b9bc0578f5122071609754 312 SUPERFAMILY SSF52540 12 181 2.2E-9 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_1334 c944246267b916a5f1b9743a36fe2c7d 399 Gene3D G3DSA:3.30.420.40 24 394 3.1E-87 T 15-10-2018 Trad_1334 c944246267b916a5f1b9743a36fe2c7d 399 Gene3D G3DSA:3.30.420.40 197 360 3.1E-87 T 15-10-2018 Trad_1334 c944246267b916a5f1b9743a36fe2c7d 399 Pfam PF11104 Type IV pilus assembly protein PilM; 302 395 2.8E-13 T 15-10-2018 IPR005883 Type IV pilus assembly protein PilM Trad_1334 c944246267b916a5f1b9743a36fe2c7d 399 Pfam PF11104 Type IV pilus assembly protein PilM; 25 269 6.6E-37 T 15-10-2018 IPR005883 Type IV pilus assembly protein PilM Trad_1334 c944246267b916a5f1b9743a36fe2c7d 399 SUPERFAMILY SSF53067 52 186 7.12E-17 T 15-10-2018 Trad_1334 c944246267b916a5f1b9743a36fe2c7d 399 SUPERFAMILY SSF53067 213 395 1.56E-18 T 15-10-2018 Trad_1334 c944246267b916a5f1b9743a36fe2c7d 399 Gene3D G3DSA:3.30.1490.300 98 158 3.1E-87 T 15-10-2018 Trad_1334 c944246267b916a5f1b9743a36fe2c7d 399 PIRSF PIRSF019169 12 397 1.0E-83 T 15-10-2018 IPR005883 Type IV pilus assembly protein PilM Trad_1334 c944246267b916a5f1b9743a36fe2c7d 399 TIGRFAM TIGR01175 pilM: type IV pilus assembly protein PilM 20 396 2.1E-96 T 15-10-2018 IPR005883 Type IV pilus assembly protein PilM Trad_1334 c944246267b916a5f1b9743a36fe2c7d 399 SMART SM00842 23 190 0.0073 T 15-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 Trad_1819 6cc9552b59d396433a5fb998499b1ff7 291 Pfam PF01791 DeoC/LacD family aldolase 18 260 5.3E-23 T 15-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 Trad_1819 6cc9552b59d396433a5fb998499b1ff7 291 PIRSF PIRSF038992 2 290 3.5E-53 T 15-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 Trad_1819 6cc9552b59d396433a5fb998499b1ff7 291 SUPERFAMILY SSF51569 3 276 5.49E-54 T 15-10-2018 Trad_1819 6cc9552b59d396433a5fb998499b1ff7 291 SMART SM01133 16 260 7.1E-7 T 15-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 Trad_1819 6cc9552b59d396433a5fb998499b1ff7 291 Gene3D G3DSA:3.20.20.70 2 290 6.2E-56 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Trad_2261 19902ff5b7ef9d015b5e6ebbc6174b79 350 Pfam PF01883 Iron-sulfur cluster assembly protein 5 74 2.6E-20 T 15-10-2018 IPR002744 MIP18 family-like Trad_2261 19902ff5b7ef9d015b5e6ebbc6174b79 350 SUPERFAMILY SSF52540 95 340 3.66E-57 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_2261 19902ff5b7ef9d015b5e6ebbc6174b79 350 Hamap MF_02040 Iron-sulfur cluster carrier protein. 88 336 35.53 T 15-10-2018 IPR019591 Mrp/NBP35 ATP-binding protein Trad_2261 19902ff5b7ef9d015b5e6ebbc6174b79 350 Gene3D G3DSA:3.40.50.300 80 334 9.5E-77 T 15-10-2018 Trad_2261 19902ff5b7ef9d015b5e6ebbc6174b79 350 ProSitePatterns PS01215 Mrp family signature. 200 216 - T 15-10-2018 IPR000808 Mrp, conserved site GO:0005524 Trad_2261 19902ff5b7ef9d015b5e6ebbc6174b79 350 SUPERFAMILY SSF117916 1 87 3.92E-19 T 15-10-2018 IPR034904 Fe-S cluster assembly domain superfamily Trad_2261 19902ff5b7ef9d015b5e6ebbc6174b79 350 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 93 333 4.3E-91 T 15-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 Trad_1242 a150e5493bed1ec91d819b1050a613d7 465 Gene3D G3DSA:3.60.15.10 1 258 1.3E-78 T 15-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Trad_1242 a150e5493bed1ec91d819b1050a613d7 465 SMART SM00450 366 461 2.7E-17 T 15-10-2018 IPR001763 Rhodanese-like domain Trad_1242 a150e5493bed1ec91d819b1050a613d7 465 SMART SM00849 12 192 4.9E-26 T 15-10-2018 IPR001279 Metallo-beta-lactamase Trad_1242 a150e5493bed1ec91d819b1050a613d7 465 Pfam PF00581 Rhodanese-like domain 374 458 2.4E-11 T 15-10-2018 IPR001763 Rhodanese-like domain Trad_1242 a150e5493bed1ec91d819b1050a613d7 465 Gene3D G3DSA:3.40.250.10 263 357 9.1E-12 T 15-10-2018 IPR036873 Rhodanese-like domain superfamily Trad_1242 a150e5493bed1ec91d819b1050a613d7 465 SUPERFAMILY SSF52821 370 459 1.96E-25 T 15-10-2018 IPR036873 Rhodanese-like domain superfamily Trad_1242 a150e5493bed1ec91d819b1050a613d7 465 Pfam PF00753 Metallo-beta-lactamase superfamily 12 192 1.3E-11 T 15-10-2018 IPR001279 Metallo-beta-lactamase Trad_1242 a150e5493bed1ec91d819b1050a613d7 465 Gene3D G3DSA:3.40.250.10 358 463 5.8E-23 T 15-10-2018 IPR036873 Rhodanese-like domain superfamily Trad_1242 a150e5493bed1ec91d819b1050a613d7 465 SUPERFAMILY SSF52821 235 352 4.85E-10 T 15-10-2018 IPR036873 Rhodanese-like domain superfamily Trad_1242 a150e5493bed1ec91d819b1050a613d7 465 SUPERFAMILY SSF56281 4 258 1.32E-47 T 15-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Trad_1418 33da97382bf7f3118e73d999decfe5a7 264 Gene3D G3DSA:1.10.3720.10 1 251 1.7E-35 T 15-10-2018 IPR035906 MetI-like superfamily Trad_1418 33da97382bf7f3118e73d999decfe5a7 264 SUPERFAMILY SSF161098 3 250 4.97E-40 T 15-10-2018 IPR035906 MetI-like superfamily Trad_1418 33da97382bf7f3118e73d999decfe5a7 264 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 85 243 2.2E-10 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Trad_2336 94a2a0361283f78717287446bf464c54 313 Pfam PF00561 alpha/beta hydrolase fold 40 163 4.5E-17 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Trad_2336 94a2a0361283f78717287446bf464c54 313 SUPERFAMILY SSF53474 19 307 3.47E-38 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold Trad_2336 94a2a0361283f78717287446bf464c54 313 Gene3D G3DSA:3.40.50.1820 17 309 1.3E-48 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold Trad_2336 94a2a0361283f78717287446bf464c54 313 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 114 128 1.1E-5 T 15-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 Trad_2336 94a2a0361283f78717287446bf464c54 313 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 41 49 1.1E-5 T 15-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 Trad_2336 94a2a0361283f78717287446bf464c54 313 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 68 79 1.1E-5 T 15-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 Trad_1062 bf84b3ebdc53708c97c4e660c0972707 38 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 37 - T 15-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_1062 bf84b3ebdc53708c97c4e660c0972707 38 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 38 18.945 T 15-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_1062 bf84b3ebdc53708c97c4e660c0972707 38 SUPERFAMILY SSF57840 1 38 1.7E-17 T 15-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_1062 bf84b3ebdc53708c97c4e660c0972707 38 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 10 38 8.0E-7 T 15-10-2018 Trad_1062 bf84b3ebdc53708c97c4e660c0972707 38 Pfam PF00444 Ribosomal protein L36 1 38 1.1E-20 T 15-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_1062 bf84b3ebdc53708c97c4e660c0972707 38 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 38 5.9E-22 T 15-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_0728 cb637a3948c6ac86b63fde72812895b4 388 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 147 3.8E-28 T 15-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Trad_0728 cb637a3948c6ac86b63fde72812895b4 388 Gene3D G3DSA:3.90.180.10 9 374 5.4E-135 T 15-10-2018 Trad_0728 cb637a3948c6ac86b63fde72812895b4 388 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 59 73 - T 15-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 Trad_0728 cb637a3948c6ac86b63fde72812895b4 388 Pfam PF13823 Alcohol dehydrogenase GroES-associated 1 22 1.9E-10 T 15-10-2018 IPR027399 Alcohol dehydrogenase GroES-associated Trad_0728 cb637a3948c6ac86b63fde72812895b4 388 Pfam PF00107 Zinc-binding dehydrogenase 196 264 6.0E-15 T 15-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Trad_0728 cb637a3948c6ac86b63fde72812895b4 388 SUPERFAMILY SSF51735 163 349 6.11E-66 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_0728 cb637a3948c6ac86b63fde72812895b4 388 Gene3D G3DSA:3.40.50.720 177 339 5.4E-135 T 15-10-2018 Trad_0728 cb637a3948c6ac86b63fde72812895b4 388 SUPERFAMILY SSF50129 1 201 1.02E-61 T 15-10-2018 IPR011032 GroES-like superfamily Trad_2556 107f9e12909be8ebbbe39b7ab384b2b5 212 Pfam PF00027 Cyclic nucleotide-binding domain 24 94 3.9E-10 T 15-10-2018 IPR000595 Cyclic nucleotide-binding domain Trad_2556 107f9e12909be8ebbbe39b7ab384b2b5 212 SMART SM00419 155 202 5.9E-7 T 15-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Trad_2556 107f9e12909be8ebbbe39b7ab384b2b5 212 SUPERFAMILY SSF46785 134 211 1.83E-13 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Trad_2556 107f9e12909be8ebbbe39b7ab384b2b5 212 Gene3D G3DSA:2.60.120.10 19 131 2.3E-14 T 15-10-2018 IPR014710 RmlC-like jelly roll fold Trad_2556 107f9e12909be8ebbbe39b7ab384b2b5 212 SUPERFAMILY SSF51206 23 102 1.17E-14 T 15-10-2018 IPR018490 Cyclic nucleotide-binding-like Trad_2556 107f9e12909be8ebbbe39b7ab384b2b5 212 Gene3D G3DSA:1.10.10.10 132 211 7.0E-19 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Trad_2556 107f9e12909be8ebbbe39b7ab384b2b5 212 Pfam PF13545 Crp-like helix-turn-helix domain 135 208 1.1E-13 T 15-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Trad_0774 0580df524e0dacfd38d25e309f50bcf0 613 SUPERFAMILY SSF90123 5 351 3.79E-65 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Trad_0774 0580df524e0dacfd38d25e309f50bcf0 613 Gene3D G3DSA:1.20.1560.10 1 351 1.7E-66 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Trad_0774 0580df524e0dacfd38d25e309f50bcf0 613 Gene3D G3DSA:3.40.50.300 357 612 2.2E-82 T 15-10-2018 Trad_0774 0580df524e0dacfd38d25e309f50bcf0 613 SMART SM00382 390 580 4.8E-14 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_0774 0580df524e0dacfd38d25e309f50bcf0 613 SUPERFAMILY SSF52540 357 604 2.09E-80 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_0774 0580df524e0dacfd38d25e309f50bcf0 613 Pfam PF00005 ABC transporter 381 533 9.5E-34 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Trad_0774 0580df524e0dacfd38d25e309f50bcf0 613 Pfam PF00664 ABC transporter transmembrane region 86 318 8.7E-36 T 15-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Trad_2221 5d51c8fa245ce219a171aab5e995d692 171 SUPERFAMILY SSF53448 7 139 2.06E-21 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Trad_2221 5d51c8fa245ce219a171aab5e995d692 171 Gene3D G3DSA:3.90.550.20 8 128 6.4E-10 T 15-10-2018 Trad_2221 5d51c8fa245ce219a171aab5e995d692 171 Pfam PF05704 Capsular polysaccharide synthesis protein 9 137 4.6E-37 T 15-10-2018 IPR008441 Capsular polysaccharide synthesis protein Trad_2547 000b43252817040bf479ce37761dc6a8 315 Gene3D G3DSA:3.40.1190.20 2 305 1.2E-65 T 15-10-2018 IPR029056 Ribokinase-like Trad_2547 000b43252817040bf479ce37761dc6a8 315 SUPERFAMILY SSF53613 1 295 1.24E-62 T 15-10-2018 IPR029056 Ribokinase-like Trad_2547 000b43252817040bf479ce37761dc6a8 315 Pfam PF00294 pfkB family carbohydrate kinase 1 296 7.1E-48 T 15-10-2018 IPR011611 Carbohydrate kinase PfkB Trad_2547 000b43252817040bf479ce37761dc6a8 315 PRINTS PR00990 Ribokinase signature 33 52 4.3E-10 T 15-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 Trad_2547 000b43252817040bf479ce37761dc6a8 315 PRINTS PR00990 Ribokinase signature 6 27 4.3E-10 T 15-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 Trad_2547 000b43252817040bf479ce37761dc6a8 315 PRINTS PR00990 Ribokinase signature 220 231 4.3E-10 T 15-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 Trad_2547 000b43252817040bf479ce37761dc6a8 315 PRINTS PR00990 Ribokinase signature 181 196 4.3E-10 T 15-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 Trad_2547 000b43252817040bf479ce37761dc6a8 315 PRINTS PR00990 Ribokinase signature 105 118 4.3E-10 T 15-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 Trad_0055 4bb70548bbab4963b6673ea234d5bb4e 413 Pfam PF02515 CoA-transferase family III 13 380 5.6E-132 T 15-10-2018 IPR003673 CoA-transferase family III GO:0003824 Trad_0055 4bb70548bbab4963b6673ea234d5bb4e 413 Gene3D G3DSA:3.30.1540.10 239 330 2.2E-138 T 15-10-2018 Trad_0055 4bb70548bbab4963b6673ea234d5bb4e 413 Gene3D G3DSA:3.40.50.10540 13 398 2.2E-138 T 15-10-2018 IPR023606 CoA-transferase family III domain superfamily Trad_0055 4bb70548bbab4963b6673ea234d5bb4e 413 SUPERFAMILY SSF89796 11 403 3.53E-138 T 15-10-2018 IPR023606 CoA-transferase family III domain superfamily Trad_0411 a51e23c3e6dd60f943b37a122413e4b6 483 Pfam PF14559 Tetratricopeptide repeat 335 396 5.6E-6 T 15-10-2018 Trad_0411 a51e23c3e6dd60f943b37a122413e4b6 483 Pfam PF13176 Tetratricopeptide repeat 289 316 0.0015 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Trad_0411 a51e23c3e6dd60f943b37a122413e4b6 483 Gene3D G3DSA:1.25.40.10 275 405 7.5E-15 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Trad_0411 a51e23c3e6dd60f943b37a122413e4b6 483 Gene3D G3DSA:1.25.40.10 142 273 9.3E-10 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Trad_0411 a51e23c3e6dd60f943b37a122413e4b6 483 SMART SM00028 286 319 480.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Trad_0411 a51e23c3e6dd60f943b37a122413e4b6 483 SMART SM00028 321 354 0.036 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Trad_0411 a51e23c3e6dd60f943b37a122413e4b6 483 SMART SM00028 225 258 160.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Trad_0411 a51e23c3e6dd60f943b37a122413e4b6 483 SMART SM00028 192 224 220.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Trad_0411 a51e23c3e6dd60f943b37a122413e4b6 483 SUPERFAMILY SSF48452 169 379 9.86E-16 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Trad_0932 1d6514925a7d638900a6399f99dfdc64 137 PRINTS PR01217 Proline rich extensin signature 8 20 3.0E-10 T 15-10-2018 Trad_0932 1d6514925a7d638900a6399f99dfdc64 137 PRINTS PR01217 Proline rich extensin signature 51 67 3.0E-10 T 15-10-2018 Trad_0932 1d6514925a7d638900a6399f99dfdc64 137 PRINTS PR01217 Proline rich extensin signature 90 115 3.0E-10 T 15-10-2018 Trad_0932 1d6514925a7d638900a6399f99dfdc64 137 PRINTS PR01217 Proline rich extensin signature 29 50 3.0E-10 T 15-10-2018 Trad_1880 357dca3a69bf965620122e86304e76ac 306 SUPERFAMILY SSF51730 38 302 5.1E-63 T 15-10-2018 IPR029041 FAD-linked oxidoreductase-like Trad_1880 357dca3a69bf965620122e86304e76ac 306 Gene3D G3DSA:3.20.20.530 18 306 2.2E-84 T 15-10-2018 Trad_1880 357dca3a69bf965620122e86304e76ac 306 Pfam PF01619 Proline dehydrogenase 45 300 5.1E-30 T 15-10-2018 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|Reactome: R-HSA-70688 Trad_1880 357dca3a69bf965620122e86304e76ac 306 PIRSF PIRSF000196 2 306 3.9E-98 T 15-10-2018 IPR008219 Proline dehydrogenase, bacteria and archaea GO:0004657|GO:0010133 KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922 Trad_0660 d252973902c4ccb81b705ac490504d4b 421 Gene3D G3DSA:3.40.50.11440 6 258 1.4E-73 T 15-10-2018 Trad_0660 d252973902c4ccb81b705ac490504d4b 421 Pfam PF09861 Domain of unknown function (DUF2088) 31 196 2.2E-24 T 15-10-2018 IPR018657 LarA-like, N-terminal GO:0050043 KEGG: 00620+5.1.2.1 Trad_0660 d252973902c4ccb81b705ac490504d4b 421 Gene3D G3DSA:3.90.226.30 259 421 1.5E-63 T 15-10-2018 Trad_1341 528db9d3ddb79af58c56ad4c824f6180 237 Gene3D G3DSA:2.40.240.20 1 67 1.0E-14 T 15-10-2018 Trad_1341 528db9d3ddb79af58c56ad4c824f6180 237 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 11 231 4.5E-43 T 15-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 Trad_1341 528db9d3ddb79af58c56ad4c824f6180 237 PIRSF PIRSF015601 3 234 1.6E-49 T 15-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 Trad_1341 528db9d3ddb79af58c56ad4c824f6180 237 Pfam PF04452 RNA methyltransferase 18 231 7.9E-52 T 15-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 Trad_1341 528db9d3ddb79af58c56ad4c824f6180 237 SUPERFAMILY SSF75217 73 232 3.87E-37 T 15-10-2018 IPR029028 Alpha/beta knot methyltransferases Trad_1341 528db9d3ddb79af58c56ad4c824f6180 237 Gene3D G3DSA:3.40.1280.10 72 233 1.2E-45 T 15-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Trad_1341 528db9d3ddb79af58c56ad4c824f6180 237 SUPERFAMILY SSF88697 5 64 1.13E-8 T 15-10-2018 IPR015947 PUA-like superfamily Trad_1493 3d6d77bde6c679b354b5f12f3bdcc73f 304 Gene3D G3DSA:3.40.50.620 161 287 6.8E-21 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Trad_1493 3d6d77bde6c679b354b5f12f3bdcc73f 304 SUPERFAMILY SSF52402 1 144 2.43E-29 T 15-10-2018 Trad_1493 3d6d77bde6c679b354b5f12f3bdcc73f 304 Pfam PF00582 Universal stress protein family 163 285 2.9E-13 T 15-10-2018 IPR006016 UspA Trad_1493 3d6d77bde6c679b354b5f12f3bdcc73f 304 Pfam PF00582 Universal stress protein family 1 143 1.0E-22 T 15-10-2018 IPR006016 UspA Trad_1493 3d6d77bde6c679b354b5f12f3bdcc73f 304 SUPERFAMILY SSF52402 163 287 2.76E-20 T 15-10-2018 Trad_1493 3d6d77bde6c679b354b5f12f3bdcc73f 304 PRINTS PR01438 Universal stress protein signature 246 258 4.1E-11 T 15-10-2018 IPR006015 Universal stress protein A Trad_1493 3d6d77bde6c679b354b5f12f3bdcc73f 304 PRINTS PR01438 Universal stress protein signature 264 286 4.1E-11 T 15-10-2018 IPR006015 Universal stress protein A Trad_1493 3d6d77bde6c679b354b5f12f3bdcc73f 304 PRINTS PR01438 Universal stress protein signature 2 20 4.1E-11 T 15-10-2018 IPR006015 Universal stress protein A Trad_1493 3d6d77bde6c679b354b5f12f3bdcc73f 304 Gene3D G3DSA:3.40.50.620 1 143 7.2E-30 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Trad_1456 d7f22d14f9204dc4dfe1ad6a5d6275c1 182 TIGRFAM TIGR01367 pyrE_Therm: orotate phosphoribosyltransferase 6 181 7.0E-64 T 15-10-2018 IPR006273 Orotate phosphoribosyltransferase, bacterial GO:0004588|GO:0019856 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Trad_1456 d7f22d14f9204dc4dfe1ad6a5d6275c1 182 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 182 22.661 T 15-10-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Trad_1456 d7f22d14f9204dc4dfe1ad6a5d6275c1 182 Gene3D G3DSA:3.40.50.2020 5 181 1.5E-54 T 15-10-2018 Trad_1456 d7f22d14f9204dc4dfe1ad6a5d6275c1 182 Pfam PF00156 Phosphoribosyl transferase domain 44 155 1.7E-15 T 15-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 Trad_1456 d7f22d14f9204dc4dfe1ad6a5d6275c1 182 SUPERFAMILY SSF53271 10 147 4.33E-37 T 15-10-2018 IPR029057 Phosphoribosyltransferase-like Trad_2082 809c78093fe19887a7e5069f286cd702 719 SUPERFAMILY SSF81653 210 307 7.72E-25 T 15-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 Trad_2082 809c78093fe19887a7e5069f286cd702 719 Pfam PF00702 haloacid dehalogenase-like hydrolase 404 619 6.3E-46 T 15-10-2018 Trad_2082 809c78093fe19887a7e5069f286cd702 719 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 628 640 2.0E-25 T 15-10-2018 Trad_2082 809c78093fe19887a7e5069f286cd702 719 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 257 271 2.0E-25 T 15-10-2018 Trad_2082 809c78093fe19887a7e5069f286cd702 719 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 605 624 2.0E-25 T 15-10-2018 Trad_2082 809c78093fe19887a7e5069f286cd702 719 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 553 563 2.0E-25 T 15-10-2018 Trad_2082 809c78093fe19887a7e5069f286cd702 719 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 407 421 2.0E-25 T 15-10-2018 Trad_2082 809c78093fe19887a7e5069f286cd702 719 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 578 594 1.0E-10 T 15-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Trad_2082 809c78093fe19887a7e5069f286cd702 719 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 636 661 1.0E-10 T 15-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Trad_2082 809c78093fe19887a7e5069f286cd702 719 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 605 621 1.0E-10 T 15-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Trad_2082 809c78093fe19887a7e5069f286cd702 719 SUPERFAMILY SSF56784 405 710 1.87E-54 T 15-10-2018 IPR036412 HAD-like superfamily Trad_2082 809c78093fe19887a7e5069f286cd702 719 Gene3D G3DSA:3.40.50.1000 388 657 1.4E-88 T 15-10-2018 IPR023214 HAD superfamily Trad_2082 809c78093fe19887a7e5069f286cd702 719 Gene3D G3DSA:2.70.150.20 195 311 1.4E-35 T 15-10-2018 Trad_2082 809c78093fe19887a7e5069f286cd702 719 Gene3D G3DSA:3.40.1110.10 418 538 1.4E-88 T 15-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 Trad_2082 809c78093fe19887a7e5069f286cd702 719 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 127 714 1.2E-179 T 15-10-2018 Trad_2082 809c78093fe19887a7e5069f286cd702 719 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 180 685 2.5E-88 T 15-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Trad_2082 809c78093fe19887a7e5069f286cd702 719 Pfam PF00122 E1-E2 ATPase 208 387 4.1E-52 T 15-10-2018 Trad_2082 809c78093fe19887a7e5069f286cd702 719 SUPERFAMILY SSF81665 146 399 6.67E-12 T 15-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 Trad_2082 809c78093fe19887a7e5069f286cd702 719 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 409 415 - T 15-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 Trad_2082 809c78093fe19887a7e5069f286cd702 719 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 145 713 2.6E-179 T 15-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 Trad_0071 ec75d4794c9f3867b75a991b45e79afc 104 SUPERFAMILY SSF54565 2 81 6.8E-30 T 15-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_0071 ec75d4794c9f3867b75a991b45e79afc 104 TIGRFAM TIGR00002 S16: ribosomal protein bS16 3 80 4.0E-31 T 15-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_0071 ec75d4794c9f3867b75a991b45e79afc 104 Pfam PF00886 Ribosomal protein S16 9 68 3.4E-24 T 15-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_0071 ec75d4794c9f3867b75a991b45e79afc 104 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 2 78 24.14 T 15-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_0071 ec75d4794c9f3867b75a991b45e79afc 104 Gene3D G3DSA:3.30.1320.10 1 104 1.3E-32 T 15-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_1884 9d4483d228156440153587bc66860ef0 611 SMART SM00382 380 578 7.7E-11 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_1884 9d4483d228156440153587bc66860ef0 611 Gene3D G3DSA:3.40.50.300 351 602 9.6E-64 T 15-10-2018 Trad_1884 9d4483d228156440153587bc66860ef0 611 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 578 600 1.4E-12 T 15-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal Trad_1884 9d4483d228156440153587bc66860ef0 611 SUPERFAMILY SSF52540 355 600 7.95E-65 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_1884 9d4483d228156440153587bc66860ef0 611 Pfam PF02653 Branched-chain amino acid transport system / permease component 44 314 2.6E-37 T 15-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Trad_1884 9d4483d228156440153587bc66860ef0 611 Pfam PF00005 ABC transporter 372 529 2.8E-29 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Trad_2605 a686ae955d8160e294de4e6959daf041 802 Pfam PF00092 von Willebrand factor type A domain 370 546 7.4E-17 T 15-10-2018 IPR002035 von Willebrand factor, type A Trad_2605 a686ae955d8160e294de4e6959daf041 802 SMART SM00327 367 553 5.5E-21 T 15-10-2018 IPR002035 von Willebrand factor, type A Trad_2605 a686ae955d8160e294de4e6959daf041 802 SUPERFAMILY SSF52317 277 649 1.21E-24 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like Trad_2605 a686ae955d8160e294de4e6959daf041 802 Gene3D G3DSA:3.40.50.410 368 550 2.7E-35 T 15-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Trad_2605 a686ae955d8160e294de4e6959daf041 802 SUPERFAMILY SSF53300 368 546 2.23E-28 T 15-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Trad_0046 fb523f84e75a9b50618d043fc521e5ca 268 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 3 257 1.7E-115 T 15-10-2018 IPR010223 ATP binding protein MinD, bacterial-type GO:0016887 Trad_0046 fb523f84e75a9b50618d043fc521e5ca 268 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 6 220 5.9E-21 T 15-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain Trad_0046 fb523f84e75a9b50618d043fc521e5ca 268 PIRSF PIRSF003092 1 268 3.4E-88 T 15-10-2018 IPR025501 ATP binding protein MinD Trad_0046 fb523f84e75a9b50618d043fc521e5ca 268 SUPERFAMILY SSF52540 4 249 1.08E-53 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_0046 fb523f84e75a9b50618d043fc521e5ca 268 Gene3D G3DSA:3.40.50.300 3 256 4.5E-64 T 15-10-2018 Trad_1330 f8175e09b8581b217527e3d98f00de3b 560 Pfam PF03958 Bacterial type II/III secretion system short domain 233 342 4.4E-13 T 15-10-2018 IPR005644 NolW-like Trad_1330 f8175e09b8581b217527e3d98f00de3b 560 Pfam PF00263 Bacterial type II and III secretion system protein 405 559 4.1E-29 T 15-10-2018 IPR004846 Type II/III secretion system GO:0009306 Trad_1330 f8175e09b8581b217527e3d98f00de3b 560 Gene3D G3DSA:3.30.1370.120 232 340 5.7E-14 T 15-10-2018 IPR038591 NolW-like superfamily Trad_1330 f8175e09b8581b217527e3d98f00de3b 560 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 505 538 - T 15-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 Trad_1330 f8175e09b8581b217527e3d98f00de3b 560 PRINTS PR00811 Bacterial general secretion pathway protein D signature 547 560 8.2E-6 T 15-10-2018 IPR001775 GspD/PilQ family Trad_1330 f8175e09b8581b217527e3d98f00de3b 560 PRINTS PR00811 Bacterial general secretion pathway protein D signature 342 352 8.2E-6 T 15-10-2018 IPR001775 GspD/PilQ family Trad_1330 f8175e09b8581b217527e3d98f00de3b 560 PRINTS PR00811 Bacterial general secretion pathway protein D signature 524 542 8.2E-6 T 15-10-2018 IPR001775 GspD/PilQ family Trad_0208 162c873eb3776508f6bca39793a38ade 540 Pfam PF08502 LeuA allosteric (dimerisation) domain 374 515 1.2E-23 T 15-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Trad_0208 162c873eb3776508f6bca39793a38ade 540 Gene3D G3DSA:3.30.160.270 395 515 9.7E-10 T 15-10-2018 Trad_0208 162c873eb3776508f6bca39793a38ade 540 Pfam PF00682 HMGL-like 8 277 4.4E-42 T 15-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 Trad_0208 162c873eb3776508f6bca39793a38ade 540 SUPERFAMILY SSF51569 3 294 8.79E-84 T 15-10-2018 Trad_0208 162c873eb3776508f6bca39793a38ade 540 TIGRFAM TIGR00977 citramal_synth: citramalate synthase 8 520 5.9E-205 T 15-10-2018 IPR005675 Citramalate synthase GO:0019752|GO:0046912 KEGG: 00290+2.3.1.182|KEGG: 00660+2.3.1.182|MetaCyc: PWY-5101 Trad_0208 162c873eb3776508f6bca39793a38ade 540 SMART SM00917 372 516 4.0E-36 T 15-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Trad_0208 162c873eb3776508f6bca39793a38ade 540 Gene3D G3DSA:3.20.20.70 7 327 3.2E-106 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Trad_0208 162c873eb3776508f6bca39793a38ade 540 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 15 31 - T 15-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Trad_0208 162c873eb3776508f6bca39793a38ade 540 SUPERFAMILY SSF110921 399 512 1.31E-18 T 15-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Trad_2452 cac7205dd207744e60f6d5a0822a8f5a 434 PRINTS PR00145 Argininosuccinate lyase family signature 134 154 2.2E-8 T 15-10-2018 Trad_2452 cac7205dd207744e60f6d5a0822a8f5a 434 PRINTS PR00145 Argininosuccinate lyase family signature 222 246 2.2E-8 T 15-10-2018 Trad_2452 cac7205dd207744e60f6d5a0822a8f5a 434 PRINTS PR00145 Argininosuccinate lyase family signature 267 283 2.2E-8 T 15-10-2018 Trad_2452 cac7205dd207744e60f6d5a0822a8f5a 434 PRINTS PR00145 Argininosuccinate lyase family signature 93 115 2.2E-8 T 15-10-2018 Trad_2452 cac7205dd207744e60f6d5a0822a8f5a 434 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 2 432 3.3E-143 T 15-10-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Trad_2452 cac7205dd207744e60f6d5a0822a8f5a 434 SMART SM00998 355 433 1.3E-30 T 15-10-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Trad_2452 cac7205dd207744e60f6d5a0822a8f5a 434 PRINTS PR00149 Fumarate lyase superfamily signature 139 157 1.4E-25 T 15-10-2018 IPR000362 Fumarate lyase family Trad_2452 cac7205dd207744e60f6d5a0822a8f5a 434 PRINTS PR00149 Fumarate lyase superfamily signature 267 283 1.4E-25 T 15-10-2018 IPR000362 Fumarate lyase family Trad_2452 cac7205dd207744e60f6d5a0822a8f5a 434 PRINTS PR00149 Fumarate lyase superfamily signature 222 249 1.4E-25 T 15-10-2018 IPR000362 Fumarate lyase family Trad_2452 cac7205dd207744e60f6d5a0822a8f5a 434 PRINTS PR00149 Fumarate lyase superfamily signature 94 112 1.4E-25 T 15-10-2018 IPR000362 Fumarate lyase family Trad_2452 cac7205dd207744e60f6d5a0822a8f5a 434 ProSitePatterns PS00163 Fumarate lyases signature. 267 276 - T 15-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 Trad_2452 cac7205dd207744e60f6d5a0822a8f5a 434 Gene3D G3DSA:1.20.200.10 99 354 1.0E-90 T 15-10-2018 Trad_2452 cac7205dd207744e60f6d5a0822a8f5a 434 SUPERFAMILY SSF48557 3 431 2.36E-123 T 15-10-2018 IPR008948 L-Aspartase-like GO:0003824 Trad_2452 cac7205dd207744e60f6d5a0822a8f5a 434 Gene3D G3DSA:1.10.40.30 355 434 2.8E-24 T 15-10-2018 Trad_2452 cac7205dd207744e60f6d5a0822a8f5a 434 Pfam PF00206 Lyase 6 287 4.6E-57 T 15-10-2018 IPR022761 Fumarate lyase, N-terminal Trad_2452 cac7205dd207744e60f6d5a0822a8f5a 434 Gene3D G3DSA:1.10.275.10 1 98 6.1E-30 T 15-10-2018 IPR024083 Fumarase/histidase, N-terminal Trad_2452 cac7205dd207744e60f6d5a0822a8f5a 434 Pfam PF10397 Adenylosuccinate lyase C-terminus 356 432 6.5E-19 T 15-10-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Trad_2673 84a738795f66a84d2a4eb58f957cff24 234 Gene3D G3DSA:1.10.10.10 151 233 9.8E-21 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Trad_2673 84a738795f66a84d2a4eb58f957cff24 234 Pfam PF13545 Crp-like helix-turn-helix domain 155 227 1.4E-15 T 15-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Trad_2673 84a738795f66a84d2a4eb58f957cff24 234 Pfam PF00027 Cyclic nucleotide-binding domain 36 122 9.2E-22 T 15-10-2018 IPR000595 Cyclic nucleotide-binding domain Trad_2673 84a738795f66a84d2a4eb58f957cff24 234 SMART SM00419 174 222 1.2E-6 T 15-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Trad_2673 84a738795f66a84d2a4eb58f957cff24 234 Gene3D G3DSA:2.60.120.10 9 149 1.9E-39 T 15-10-2018 IPR014710 RmlC-like jelly roll fold Trad_2673 84a738795f66a84d2a4eb58f957cff24 234 SUPERFAMILY SSF46785 152 229 8.06E-18 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Trad_2673 84a738795f66a84d2a4eb58f957cff24 234 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 180 196 3.3E-5 T 15-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Trad_2673 84a738795f66a84d2a4eb58f957cff24 234 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 196 211 3.3E-5 T 15-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Trad_2673 84a738795f66a84d2a4eb58f957cff24 234 SMART SM00100 17 138 1.1E-24 T 15-10-2018 IPR000595 Cyclic nucleotide-binding domain Trad_2673 84a738795f66a84d2a4eb58f957cff24 234 SUPERFAMILY SSF51206 10 146 1.7E-36 T 15-10-2018 IPR018490 Cyclic nucleotide-binding-like Trad_0313 2c911da6c5293bdf2d57efe74895e0aa 152 SUPERFAMILY SSF54637 10 149 2.78E-40 T 15-10-2018 IPR029069 HotDog domain superfamily Trad_0313 2c911da6c5293bdf2d57efe74895e0aa 152 Pfam PF07977 FabA-like domain 15 142 2.3E-26 T 15-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Trad_0313 2c911da6c5293bdf2d57efe74895e0aa 152 Gene3D G3DSA:3.10.129.10 2 151 1.9E-47 T 15-10-2018 Trad_2549 98c61d063995d95325130631fe2984a4 282 Gene3D G3DSA:1.10.10.10 202 279 6.1E-9 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Trad_2549 98c61d063995d95325130631fe2984a4 282 Pfam PF00753 Metallo-beta-lactamase superfamily 26 192 8.1E-25 T 15-10-2018 IPR001279 Metallo-beta-lactamase Trad_2549 98c61d063995d95325130631fe2984a4 282 SUPERFAMILY SSF56281 8 268 1.26E-55 T 15-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Trad_2549 98c61d063995d95325130631fe2984a4 282 Gene3D G3DSA:3.60.15.10 2 201 2.0E-41 T 15-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Trad_2549 98c61d063995d95325130631fe2984a4 282 SMART SM00849 29 192 9.5E-31 T 15-10-2018 IPR001279 Metallo-beta-lactamase Trad_0460 f7772922130a45e92aa23238e4a37f24 607 Gene3D G3DSA:3.40.50.620 103 486 8.6E-116 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Trad_0460 f7772922130a45e92aa23238e4a37f24 607 Pfam PF00750 tRNA synthetases class I (R) 103 312 9.1E-17 T 15-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 Trad_0460 f7772922130a45e92aa23238e4a37f24 607 Pfam PF00750 tRNA synthetases class I (R) 354 466 1.0E-11 T 15-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 Trad_0460 f7772922130a45e92aa23238e4a37f24 607 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 5 84 6.8E-17 T 15-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Trad_0460 f7772922130a45e92aa23238e4a37f24 607 SUPERFAMILY SSF47323 477 607 1.05E-28 T 15-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Trad_0460 f7772922130a45e92aa23238e4a37f24 607 SUPERFAMILY SSF52374 101 474 2.05E-69 T 15-10-2018 Trad_0460 f7772922130a45e92aa23238e4a37f24 607 Hamap MF_00123 Arginine--tRNA ligase [argS]. 5 607 23.021 T 15-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 Trad_0460 f7772922130a45e92aa23238e4a37f24 607 SMART SM00836 483 607 4.7E-32 T 15-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 Trad_0460 f7772922130a45e92aa23238e4a37f24 607 PRINTS PR01038 Arginyl-tRNA synthetase signature 295 316 6.0E-20 T 15-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 Trad_0460 f7772922130a45e92aa23238e4a37f24 607 PRINTS PR01038 Arginyl-tRNA synthetase signature 106 121 6.0E-20 T 15-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 Trad_0460 f7772922130a45e92aa23238e4a37f24 607 PRINTS PR01038 Arginyl-tRNA synthetase signature 121 137 6.0E-20 T 15-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 Trad_0460 f7772922130a45e92aa23238e4a37f24 607 PRINTS PR01038 Arginyl-tRNA synthetase signature 145 158 6.0E-20 T 15-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 Trad_0460 f7772922130a45e92aa23238e4a37f24 607 SUPERFAMILY SSF55190 6 93 1.44E-19 T 15-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 Trad_0460 f7772922130a45e92aa23238e4a37f24 607 Pfam PF05746 DALR anticodon binding domain 483 607 4.0E-27 T 15-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 Trad_0460 f7772922130a45e92aa23238e4a37f24 607 Gene3D G3DSA:3.30.1360.70 1 102 3.1E-20 T 15-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 Trad_0460 f7772922130a45e92aa23238e4a37f24 607 Gene3D G3DSA:1.10.730.10 487 607 2.0E-30 T 15-10-2018 Trad_0460 f7772922130a45e92aa23238e4a37f24 607 SMART SM01016 1 84 8.1E-25 T 15-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Trad_1638 934c0a91c8f50554b6f0629cbce899cd 665 SUPERFAMILY SSF55186 63 249 1.02E-52 T 15-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 Trad_1638 934c0a91c8f50554b6f0629cbce899cd 665 SUPERFAMILY SSF52954 545 647 3.17E-30 T 15-10-2018 Trad_1638 934c0a91c8f50554b6f0629cbce899cd 665 Gene3D G3DSA:3.40.50.800 548 654 9.9E-30 T 15-10-2018 IPR036621 Anticodon-binding domain superfamily Trad_1638 934c0a91c8f50554b6f0629cbce899cd 665 Pfam PF02824 TGS domain 1 60 1.8E-15 T 15-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 Trad_1638 934c0a91c8f50554b6f0629cbce899cd 665 Gene3D G3DSA:3.10.20.30 1 63 2.7E-17 T 15-10-2018 IPR012675 Beta-grasp domain superfamily Trad_1638 934c0a91c8f50554b6f0629cbce899cd 665 PRINTS PR01047 Threonyl-tRNA synthetase signature 372 395 1.1E-40 T 15-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Trad_1638 934c0a91c8f50554b6f0629cbce899cd 665 PRINTS PR01047 Threonyl-tRNA synthetase signature 549 561 1.1E-40 T 15-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Trad_1638 934c0a91c8f50554b6f0629cbce899cd 665 PRINTS PR01047 Threonyl-tRNA synthetase signature 479 507 1.1E-40 T 15-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Trad_1638 934c0a91c8f50554b6f0629cbce899cd 665 PRINTS PR01047 Threonyl-tRNA synthetase signature 339 367 1.1E-40 T 15-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Trad_1638 934c0a91c8f50554b6f0629cbce899cd 665 PRINTS PR01047 Threonyl-tRNA synthetase signature 522 535 1.1E-40 T 15-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Trad_1638 934c0a91c8f50554b6f0629cbce899cd 665 Pfam PF03129 Anticodon binding domain 556 645 6.3E-23 T 15-10-2018 IPR004154 Anticodon-binding Trad_1638 934c0a91c8f50554b6f0629cbce899cd 665 Gene3D G3DSA:3.30.54.20 136 194 3.9E-57 T 15-10-2018 Trad_1638 934c0a91c8f50554b6f0629cbce899cd 665 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 335 543 4.2E-33 T 15-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Trad_1638 934c0a91c8f50554b6f0629cbce899cd 665 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 65 649 32.067 T 15-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Trad_1638 934c0a91c8f50554b6f0629cbce899cd 665 SMART SM00863 174 227 1.1E-23 T 15-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 Trad_1638 934c0a91c8f50554b6f0629cbce899cd 665 Gene3D G3DSA:3.30.980.10 69 230 3.9E-57 T 15-10-2018 Trad_1638 934c0a91c8f50554b6f0629cbce899cd 665 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 174 227 8.8E-13 T 15-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 Trad_1638 934c0a91c8f50554b6f0629cbce899cd 665 Gene3D G3DSA:3.30.930.10 233 547 1.3E-104 T 15-10-2018 Trad_1638 934c0a91c8f50554b6f0629cbce899cd 665 SUPERFAMILY SSF81271 2 60 9.37E-14 T 15-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 Trad_1638 934c0a91c8f50554b6f0629cbce899cd 665 SUPERFAMILY SSF55681 251 540 5.81E-78 T 15-10-2018 Trad_1638 934c0a91c8f50554b6f0629cbce899cd 665 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 71 646 1.1E-191 T 15-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Trad_1743 59acde06f49f96aa8cf857196c580327 95 Gene3D G3DSA:2.170.150.40 2 93 7.5E-29 T 15-10-2018 Trad_1743 59acde06f49f96aa8cf857196c580327 95 Pfam PF04248 Domain of unknown function (DUF427) 3 88 1.2E-30 T 15-10-2018 IPR007361 Domain of unknown function DUF427 Trad_1586 b54f37786f6a609653a88536f8f2f1fd 143 ProSitePatterns PS01317 SsrA-binding protein. 19 31 - T 15-10-2018 IPR020081 SsrA-binding protein, conserved site Trad_1586 b54f37786f6a609653a88536f8f2f1fd 143 Gene3D G3DSA:2.40.280.10 1 120 8.3E-48 T 15-10-2018 IPR023620 Small protein B Trad_1586 b54f37786f6a609653a88536f8f2f1fd 143 SUPERFAMILY SSF74982 2 124 4.32E-47 T 15-10-2018 IPR023620 Small protein B Trad_1586 b54f37786f6a609653a88536f8f2f1fd 143 Hamap MF_00023 SsrA-binding protein [smpB]. 1 143 66.945 T 15-10-2018 IPR000037 SsrA-binding protein GO:0003723 Trad_1586 b54f37786f6a609653a88536f8f2f1fd 143 TIGRFAM TIGR00086 smpB: SsrA-binding protein 2 142 2.0E-53 T 15-10-2018 IPR000037 SsrA-binding protein GO:0003723 Trad_1586 b54f37786f6a609653a88536f8f2f1fd 143 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 1 124 2.0E-33 T 15-10-2018 IPR000037 SsrA-binding protein GO:0003723 Trad_1586 b54f37786f6a609653a88536f8f2f1fd 143 Pfam PF01668 SmpB protein 2 143 2.7E-56 T 15-10-2018 IPR000037 SsrA-binding protein GO:0003723 Trad_1778 bd3fdd7921fd14370cecdc3e52214e62 125 Gene3D G3DSA:3.40.50.1010 1 124 1.3E-11 T 15-10-2018 Trad_1778 bd3fdd7921fd14370cecdc3e52214e62 125 SUPERFAMILY SSF88723 1 123 2.75E-21 T 15-10-2018 IPR029060 PIN-like domain superfamily Trad_1778 bd3fdd7921fd14370cecdc3e52214e62 125 Pfam PF01850 PIN domain 4 119 1.9E-15 T 15-10-2018 IPR002716 PIN domain Trad_1675 418d1aa4a8246953292d7cfe807d1049 260 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 15-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Trad_1675 418d1aa4a8246953292d7cfe807d1049 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 6.4E-10 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_1675 418d1aa4a8246953292d7cfe807d1049 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 6.4E-10 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_1675 418d1aa4a8246953292d7cfe807d1049 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 6.4E-10 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_1675 418d1aa4a8246953292d7cfe807d1049 260 Pfam PF00106 short chain dehydrogenase 9 191 2.2E-51 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_1675 418d1aa4a8246953292d7cfe807d1049 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 1.0E-24 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_1675 418d1aa4a8246953292d7cfe807d1049 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.0E-24 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_1675 418d1aa4a8246953292d7cfe807d1049 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 1.0E-24 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_1675 418d1aa4a8246953292d7cfe807d1049 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 1.0E-24 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_1675 418d1aa4a8246953292d7cfe807d1049 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 1.0E-24 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_1675 418d1aa4a8246953292d7cfe807d1049 260 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 187 9.1E-4 T 15-10-2018 Trad_1675 418d1aa4a8246953292d7cfe807d1049 260 SUPERFAMILY SSF51735 4 233 7.91E-63 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_1675 418d1aa4a8246953292d7cfe807d1049 260 Gene3D G3DSA:3.40.50.720 1 255 5.7E-67 T 15-10-2018 Trad_0605 d2071d27323de2d4183581922ff3b7e3 195 Gene3D G3DSA:2.40.128.110 29 193 6.7E-28 T 15-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily Trad_0605 d2071d27323de2d4183581922ff3b7e3 195 Pfam PF04264 YceI-like domain 48 190 2.1E-18 T 15-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like Trad_0605 d2071d27323de2d4183581922ff3b7e3 195 SMART SM00867 27 191 4.5E-14 T 15-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like Trad_0605 d2071d27323de2d4183581922ff3b7e3 195 SUPERFAMILY SSF101874 24 190 3.53E-23 T 15-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily Trad_0753 3e6615ecf8bb6653e905c2cdd3a55814 220 Pfam PF00005 ABC transporter 21 169 1.5E-31 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Trad_0753 3e6615ecf8bb6653e905c2cdd3a55814 220 SMART SM00382 30 217 3.1E-11 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_0753 3e6615ecf8bb6653e905c2cdd3a55814 220 SUPERFAMILY SSF52540 1 219 1.73E-68 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_0753 3e6615ecf8bb6653e905c2cdd3a55814 220 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Trad_0753 3e6615ecf8bb6653e905c2cdd3a55814 220 Gene3D G3DSA:3.40.50.300 1 220 4.1E-68 T 15-10-2018 Trad_1777 fe5dc1576715f7904ed0b43820130a7a 81 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 5 42 2.4E-11 T 15-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM Trad_1777 fe5dc1576715f7904ed0b43820130a7a 81 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 6 42 1.4E-10 T 15-10-2018 Trad_1777 fe5dc1576715f7904ed0b43820130a7a 81 SUPERFAMILY SSF143120 1 43 1.57E-11 T 15-10-2018 IPR036165 YefM-like superfamily Trad_1777 fe5dc1576715f7904ed0b43820130a7a 81 Gene3D G3DSA:3.40.1620.10 1 39 2.3E-9 T 15-10-2018 Trad_0072 39db1e7fe7ba792bcdd2904b2ad57230 439 SMART SM00382 98 243 3.2E-6 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_0072 39db1e7fe7ba792bcdd2904b2ad57230 439 SUPERFAMILY SSF47446 296 424 6.8E-40 T 15-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 Trad_0072 39db1e7fe7ba792bcdd2904b2ad57230 439 Pfam PF02978 Signal peptide binding domain 323 420 2.5E-32 T 15-10-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 Trad_0072 39db1e7fe7ba792bcdd2904b2ad57230 439 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 267 280 - T 15-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Trad_0072 39db1e7fe7ba792bcdd2904b2ad57230 439 Gene3D G3DSA:1.20.120.140 5 304 2.0E-118 T 15-10-2018 Trad_0072 39db1e7fe7ba792bcdd2904b2ad57230 439 SUPERFAMILY SSF52540 97 296 5.32E-49 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_0072 39db1e7fe7ba792bcdd2904b2ad57230 439 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 436 32.085 T 15-10-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 Trad_0072 39db1e7fe7ba792bcdd2904b2ad57230 439 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 3.4E-20 T 15-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Trad_0072 39db1e7fe7ba792bcdd2904b2ad57230 439 SMART SM00962 99 294 1.8E-97 T 15-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Trad_0072 39db1e7fe7ba792bcdd2904b2ad57230 439 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 422 4.9E-169 T 15-10-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 Trad_0072 39db1e7fe7ba792bcdd2904b2ad57230 439 SUPERFAMILY SSF47364 1 90 2.49E-25 T 15-10-2018 IPR036225 SRP/SRP receptor, N-terminal Reactome: R-HSA-1799339 Trad_0072 39db1e7fe7ba792bcdd2904b2ad57230 439 Gene3D G3DSA:1.10.260.30 322 433 4.3E-41 T 15-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 Trad_0072 39db1e7fe7ba792bcdd2904b2ad57230 439 Gene3D G3DSA:3.40.50.300 90 283 2.0E-118 T 15-10-2018 Trad_0072 39db1e7fe7ba792bcdd2904b2ad57230 439 SMART SM00963 1 86 1.1E-30 T 15-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Trad_0072 39db1e7fe7ba792bcdd2904b2ad57230 439 Pfam PF00448 SRP54-type protein, GTPase domain 100 294 8.1E-67 T 15-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Trad_2273 85023d41f4b1cd836bb8068aad41dda8 545 SUPERFAMILY SSF52540 25 246 4.26E-54 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_2273 85023d41f4b1cd836bb8068aad41dda8 545 SUPERFAMILY SSF52540 259 510 6.88E-42 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_2273 85023d41f4b1cd836bb8068aad41dda8 545 Gene3D G3DSA:3.40.50.300 276 520 4.7E-39 T 15-10-2018 Trad_2273 85023d41f4b1cd836bb8068aad41dda8 545 ProSitePatterns PS00211 ABC transporters family signature. 423 437 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Trad_2273 85023d41f4b1cd836bb8068aad41dda8 545 SMART SM00382 49 412 3.0E-7 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_2273 85023d41f4b1cd836bb8068aad41dda8 545 Gene3D G3DSA:3.40.50.300 12 261 8.0E-53 T 15-10-2018 Trad_2273 85023d41f4b1cd836bb8068aad41dda8 545 Pfam PF00005 ABC transporter 294 450 1.3E-14 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Trad_2273 85023d41f4b1cd836bb8068aad41dda8 545 Pfam PF00005 ABC transporter 41 189 6.3E-25 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Trad_1568 40548745ec37dcde3b5b9b19f4cb9af5 469 Pfam PF01565 FAD binding domain 38 177 1.3E-41 T 15-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 Trad_1568 40548745ec37dcde3b5b9b19f4cb9af5 469 Pfam PF02913 FAD linked oxidases, C-terminal domain 217 451 3.4E-63 T 15-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 Trad_1568 40548745ec37dcde3b5b9b19f4cb9af5 469 Gene3D G3DSA:3.30.465.40 14 229 6.8E-65 T 15-10-2018 Trad_1568 40548745ec37dcde3b5b9b19f4cb9af5 469 SUPERFAMILY SSF55103 216 456 1.31E-66 T 15-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 Trad_1568 40548745ec37dcde3b5b9b19f4cb9af5 469 SUPERFAMILY SSF56176 3 211 6.54E-64 T 15-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Trad_1568 40548745ec37dcde3b5b9b19f4cb9af5 469 Gene3D G3DSA:3.30.70.2740 332 412 4.6E-9 T 15-10-2018 Trad_1568 40548745ec37dcde3b5b9b19f4cb9af5 469 Gene3D G3DSA:1.10.45.10 413 453 3.5E-9 T 15-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 Trad_2545 8307b7a0ad1a38b86c8d2f33de65dee0 165 SMART SM01058 1 111 5.9E-17 T 15-10-2018 IPR003711 CarD-like/TRCF domain Trad_2545 8307b7a0ad1a38b86c8d2f33de65dee0 165 Pfam PF02559 CarD-like/TRCF domain 2 107 1.3E-11 T 15-10-2018 IPR003711 CarD-like/TRCF domain Trad_2545 8307b7a0ad1a38b86c8d2f33de65dee0 165 Gene3D G3DSA:2.30.30.840 1 59 7.2E-21 T 15-10-2018 Trad_2545 8307b7a0ad1a38b86c8d2f33de65dee0 165 Gene3D G3DSA:1.20.58.1290 60 158 8.1E-31 T 15-10-2018 Trad_2545 8307b7a0ad1a38b86c8d2f33de65dee0 165 SUPERFAMILY SSF141259 1 60 4.58E-12 T 15-10-2018 IPR036101 CarD-like/TRCF domain superfamily Trad_1611 84a61045530ab374c9be6f0096603689 355 SMART SM00864 10 202 1.7E-106 T 15-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Trad_1611 84a61045530ab374c9be6f0096603689 355 ProSitePatterns PS01135 FtsZ protein signature 2. 94 115 - T 15-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 Trad_1611 84a61045530ab374c9be6f0096603689 355 SUPERFAMILY SSF55307 201 315 3.89E-32 T 15-10-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 Trad_1611 84a61045530ab374c9be6f0096603689 355 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 5 319 2.1E-116 T 15-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 Trad_1611 84a61045530ab374c9be6f0096603689 355 ProSitePatterns PS01134 FtsZ protein signature 1. 41 75 - T 15-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 Trad_1611 84a61045530ab374c9be6f0096603689 355 SMART SM00865 204 322 4.3E-36 T 15-10-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 Trad_1611 84a61045530ab374c9be6f0096603689 355 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 6 341 35.805 T 15-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 Trad_1611 84a61045530ab374c9be6f0096603689 355 SUPERFAMILY SSF52490 10 205 4.58E-66 T 15-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 Trad_1611 84a61045530ab374c9be6f0096603689 355 Pfam PF12327 FtsZ family, C-terminal domain 219 314 4.8E-21 T 15-10-2018 IPR024757 Cell division protein FtsZ, C-terminal Trad_1611 84a61045530ab374c9be6f0096603689 355 PRINTS PR00423 Cell division protein FtsZ signature 95 115 3.8E-46 T 15-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Trad_1611 84a61045530ab374c9be6f0096603689 355 PRINTS PR00423 Cell division protein FtsZ signature 123 144 3.8E-46 T 15-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Trad_1611 84a61045530ab374c9be6f0096603689 355 PRINTS PR00423 Cell division protein FtsZ signature 209 230 3.8E-46 T 15-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Trad_1611 84a61045530ab374c9be6f0096603689 355 PRINTS PR00423 Cell division protein FtsZ signature 186 208 3.8E-46 T 15-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Trad_1611 84a61045530ab374c9be6f0096603689 355 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 11 169 8.7E-42 T 15-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Trad_1611 84a61045530ab374c9be6f0096603689 355 Gene3D G3DSA:3.40.50.1440 7 314 9.5E-112 T 15-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 Trad_1540 5309b63a7cf9f6355a3d1b34d3d98d4f 517 ProSitePatterns PS00510 Malate synthase signature. 257 272 - T 15-10-2018 IPR019830 Malate synthase, conserved site GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 Trad_1540 5309b63a7cf9f6355a3d1b34d3d98d4f 517 Gene3D G3DSA:3.20.20.360 1 402 1.9E-188 T 15-10-2018 Trad_1540 5309b63a7cf9f6355a3d1b34d3d98d4f 517 PIRSF PIRSF001363 1 517 7.7E-239 T 15-10-2018 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 Trad_1540 5309b63a7cf9f6355a3d1b34d3d98d4f 517 TIGRFAM TIGR01344 malate_syn_A: malate synthase A 16 516 6.1E-230 T 15-10-2018 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 Trad_1540 5309b63a7cf9f6355a3d1b34d3d98d4f 517 SUPERFAMILY SSF51645 5 516 4.19E-181 T 15-10-2018 IPR011076 Malate synthase-like superfamily GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 Trad_1540 5309b63a7cf9f6355a3d1b34d3d98d4f 517 Pfam PF01274 Malate synthase 5 516 2.4E-196 T 15-10-2018 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 Trad_1540 5309b63a7cf9f6355a3d1b34d3d98d4f 517 Gene3D G3DSA:1.20.1220.12 405 516 6.9E-41 T 15-10-2018 Trad_2181 a32354f9006dffe8542a58932b0c2baf 344 Pfam PF00107 Zinc-binding dehydrogenase 174 303 4.9E-26 T 15-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Trad_2181 a32354f9006dffe8542a58932b0c2baf 344 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 132 9.0E-33 T 15-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Trad_2181 a32354f9006dffe8542a58932b0c2baf 344 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 59 73 - T 15-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 Trad_2181 a32354f9006dffe8542a58932b0c2baf 344 Gene3D G3DSA:3.40.50.720 151 288 1.0E-102 T 15-10-2018 Trad_2181 a32354f9006dffe8542a58932b0c2baf 344 SMART SM00829 10 340 7.0E-8 T 15-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Trad_2181 a32354f9006dffe8542a58932b0c2baf 344 SUPERFAMILY SSF51735 137 308 9.24E-35 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_2181 a32354f9006dffe8542a58932b0c2baf 344 SUPERFAMILY SSF50129 1 171 5.02E-51 T 15-10-2018 IPR011032 GroES-like superfamily Trad_2181 a32354f9006dffe8542a58932b0c2baf 344 Gene3D G3DSA:3.90.180.10 18 331 1.0E-102 T 15-10-2018 Trad_2165 d4888e94e277a423576a96510ee7b3da 424 Gene3D G3DSA:3.40.1350.30 116 261 2.4E-56 T 15-10-2018 Trad_2165 d4888e94e277a423576a96510ee7b3da 424 Gene3D G3DSA:2.40.50.140 1 66 1.3E-8 T 15-10-2018 Trad_2165 d4888e94e277a423576a96510ee7b3da 424 Gene3D G3DSA:3.40.50.150 71 416 2.4E-56 T 15-10-2018 Trad_2165 d4888e94e277a423576a96510ee7b3da 424 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 353 384 - T 15-10-2018 IPR030390 RNA methyltransferase TrmA, active site Trad_2165 d4888e94e277a423576a96510ee7b3da 424 SUPERFAMILY SSF53335 66 422 1.14E-44 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Trad_2165 d4888e94e277a423576a96510ee7b3da 424 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 258 416 1.1E-11 T 15-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 Trad_0608 d218d4ec1241bb1728bfab4c39feb908 161 Pfam PF00196 Bacterial regulatory proteins, luxR family 83 137 3.5E-8 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Trad_0608 d218d4ec1241bb1728bfab4c39feb908 161 SUPERFAMILY SSF46894 72 140 5.78E-12 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Trad_0608 d218d4ec1241bb1728bfab4c39feb908 161 SMART SM00421 81 138 1.0E-4 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Trad_0608 d218d4ec1241bb1728bfab4c39feb908 161 Gene3D G3DSA:1.10.10.10 43 142 3.1E-11 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Trad_1544 95a812b083f1074edda25413e4b3e5f6 200 SUPERFAMILY SSF46894 152 200 9.18E-9 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Trad_1544 95a812b083f1074edda25413e4b3e5f6 200 Gene3D G3DSA:3.40.50.12740 18 200 2.0E-52 T 15-10-2018 Trad_1544 95a812b083f1074edda25413e4b3e5f6 200 Pfam PF00072 Response regulator receiver domain 20 131 3.2E-23 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Trad_1544 95a812b083f1074edda25413e4b3e5f6 200 Pfam PF00196 Bacterial regulatory proteins, luxR family 162 200 3.7E-8 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Trad_1544 95a812b083f1074edda25413e4b3e5f6 200 SMART SM00448 18 131 1.7E-24 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Trad_1544 95a812b083f1074edda25413e4b3e5f6 200 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 162 176 2.8E-6 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Trad_1544 95a812b083f1074edda25413e4b3e5f6 200 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 192 200 2.8E-6 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Trad_1544 95a812b083f1074edda25413e4b3e5f6 200 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 176 192 2.8E-6 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Trad_1544 95a812b083f1074edda25413e4b3e5f6 200 SUPERFAMILY SSF52172 17 149 1.42E-32 T 15-10-2018 IPR011006 CheY-like superfamily Trad_1544 95a812b083f1074edda25413e4b3e5f6 200 SMART SM00421 159 200 0.0084 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Trad_0384 7249e5726de3d56c507aee796f8e4eb1 280 SUPERFAMILY SSF53335 4 276 5.83E-50 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Trad_0384 7249e5726de3d56c507aee796f8e4eb1 280 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 27 276 3.7E-73 T 15-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 Trad_0384 7249e5726de3d56c507aee796f8e4eb1 280 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 4 280 39.582 T 15-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 Trad_0384 7249e5726de3d56c507aee796f8e4eb1 280 Pfam PF05175 Methyltransferase small domain 104 198 7.0E-13 T 15-10-2018 IPR007848 Methyltransferase small domain GO:0008168 Trad_0384 7249e5726de3d56c507aee796f8e4eb1 280 Gene3D G3DSA:3.40.50.150 87 280 1.7E-50 T 15-10-2018 Trad_0384 7249e5726de3d56c507aee796f8e4eb1 280 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 187 193 - T 15-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Trad_0384 7249e5726de3d56c507aee796f8e4eb1 280 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 4 272 1.5E-55 T 15-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 Trad_0384 7249e5726de3d56c507aee796f8e4eb1 280 Gene3D G3DSA:1.10.8.10 2 86 4.4E-21 T 15-10-2018 Trad_2931 0b37aa608c64b5c20429f4384fe28f2c 275 SUPERFAMILY SSF63829 5 268 4.58E-46 T 15-10-2018 Trad_2931 0b37aa608c64b5c20429f4384fe28f2c 275 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 11 247 4.8E-56 T 15-10-2018 IPR013658 SMP-30/Gluconolactonase/LRE-like region Trad_2931 0b37aa608c64b5c20429f4384fe28f2c 275 Gene3D G3DSA:2.120.10.30 1 273 2.5E-71 T 15-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like Trad_2931 0b37aa608c64b5c20429f4384fe28f2c 275 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 12 29 1.7E-29 T 15-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) Trad_2931 0b37aa608c64b5c20429f4384fe28f2c 275 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 228 246 1.7E-29 T 15-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) Trad_2931 0b37aa608c64b5c20429f4384fe28f2c 275 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 84 105 1.7E-29 T 15-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) Trad_2931 0b37aa608c64b5c20429f4384fe28f2c 275 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 123 145 1.7E-29 T 15-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) Trad_2931 0b37aa608c64b5c20429f4384fe28f2c 275 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 146 166 1.7E-29 T 15-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) Trad_2931 0b37aa608c64b5c20429f4384fe28f2c 275 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 186 203 1.7E-29 T 15-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) Trad_2950 5ef673ebfc7852b98fff80c8f7d816ee 450 SUPERFAMILY SSF56645 66 294 3.4E-59 T 15-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 Trad_2950 5ef673ebfc7852b98fff80c8f7d816ee 450 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 402 421 - T 15-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 Trad_2950 5ef673ebfc7852b98fff80c8f7d816ee 450 Gene3D G3DSA:1.10.540.10 49 188 4.3E-23 T 15-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 Trad_2950 5ef673ebfc7852b98fff80c8f7d816ee 450 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 191 284 2.5E-23 T 15-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 Trad_2950 5ef673ebfc7852b98fff80c8f7d816ee 450 Gene3D G3DSA:1.20.140.10 299 449 1.8E-41 T 15-10-2018 Trad_2950 5ef673ebfc7852b98fff80c8f7d816ee 450 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 75 185 6.2E-19 T 15-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 Trad_2950 5ef673ebfc7852b98fff80c8f7d816ee 450 SUPERFAMILY SSF47203 298 447 1.77E-41 T 15-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 Trad_2950 5ef673ebfc7852b98fff80c8f7d816ee 450 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 300 443 5.5E-34 T 15-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 Trad_2950 5ef673ebfc7852b98fff80c8f7d816ee 450 Gene3D G3DSA:2.40.110.10 190 296 1.2E-31 T 15-10-2018 Trad_0185 eb771995df3e5486db43d39429875223 215 Gene3D G3DSA:3.40.50.1820 3 212 6.3E-59 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold Trad_0185 eb771995df3e5486db43d39429875223 215 Pfam PF01738 Dienelactone hydrolase family 89 193 2.7E-10 T 15-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 Trad_0185 eb771995df3e5486db43d39429875223 215 SUPERFAMILY SSF53474 13 194 8.35E-35 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold Trad_0483 85eca9b1aa393fe530a0fb0591e2d0cd 791 SUPERFAMILY SSF50249 620 709 4.33E-20 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold Trad_0483 85eca9b1aa393fe530a0fb0591e2d0cd 791 TIGRFAM TIGR02063 RNase_R: ribonuclease R 6 700 8.9E-219 T 15-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 Trad_0483 85eca9b1aa393fe530a0fb0591e2d0cd 791 Gene3D G3DSA:2.40.50.140 56 130 1.0E-15 T 15-10-2018 Trad_0483 85eca9b1aa393fe530a0fb0591e2d0cd 791 Pfam PF00773 RNB domain 244 572 1.0E-108 T 15-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 Trad_0483 85eca9b1aa393fe530a0fb0591e2d0cd 791 SUPERFAMILY SSF50249 122 218 3.26E-13 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold Trad_0483 85eca9b1aa393fe530a0fb0591e2d0cd 791 ProSitePatterns PS01175 Ribonuclease II family signature. 539 563 - T 15-10-2018 IPR022966 Ribonuclease II/R, conserved site Trad_0483 85eca9b1aa393fe530a0fb0591e2d0cd 791 SMART SM00316 619 701 2.7E-14 T 15-10-2018 IPR022967 RNA-binding domain, S1 Trad_0483 85eca9b1aa393fe530a0fb0591e2d0cd 791 SMART SM00357 69 128 2.1E-10 T 15-10-2018 IPR011129 Cold shock domain GO:0003676 Trad_0483 85eca9b1aa393fe530a0fb0591e2d0cd 791 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 51 698 1.8E-167 T 15-10-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 Trad_0483 85eca9b1aa393fe530a0fb0591e2d0cd 791 SUPERFAMILY SSF50249 51 130 1.47E-16 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold Trad_0483 85eca9b1aa393fe530a0fb0591e2d0cd 791 Hamap MF_01895 Ribonuclease R [rnr]. 24 701 57.042 T 15-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 Trad_0483 85eca9b1aa393fe530a0fb0591e2d0cd 791 Gene3D G3DSA:2.40.50.140 622 723 1.0E-19 T 15-10-2018 Trad_0483 85eca9b1aa393fe530a0fb0591e2d0cd 791 Pfam PF08206 Ribonuclease B OB domain 70 127 2.5E-17 T 15-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain Trad_0483 85eca9b1aa393fe530a0fb0591e2d0cd 791 Pfam PF00575 S1 RNA binding domain 621 699 1.3E-11 T 15-10-2018 IPR003029 S1 domain GO:0003676 Trad_0483 85eca9b1aa393fe530a0fb0591e2d0cd 791 SMART SM00955 244 572 8.2E-159 T 15-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 Trad_0483 85eca9b1aa393fe530a0fb0591e2d0cd 791 SUPERFAMILY SSF50249 205 618 5.6E-132 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold Trad_1029 3610aba78f4ffbe47f04bb52e92bacf8 172 PIRSF PIRSF001338 8 168 6.2E-64 T 15-10-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 Trad_1029 3610aba78f4ffbe47f04bb52e92bacf8 172 Gene3D G3DSA:3.40.50.7700 3 171 1.4E-69 T 15-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 Trad_1029 3610aba78f4ffbe47f04bb52e92bacf8 172 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 13 165 8.1E-62 T 15-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 Trad_1029 3610aba78f4ffbe47f04bb52e92bacf8 172 Pfam PF00731 AIR carboxylase 13 160 3.1E-61 T 15-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 Trad_1029 3610aba78f4ffbe47f04bb52e92bacf8 172 SUPERFAMILY SSF52255 12 166 8.89E-62 T 15-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 Trad_1029 3610aba78f4ffbe47f04bb52e92bacf8 172 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 13 166 31.365 T 15-10-2018 IPR033747 Class I PurE Trad_1029 3610aba78f4ffbe47f04bb52e92bacf8 172 SMART SM01001 11 162 7.5E-95 T 15-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 Trad_2319 d399c1127f121e733ca7afcf675a87a9 392 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 14 24 - T 15-10-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Trad_2319 d399c1127f121e733ca7afcf675a87a9 392 SUPERFAMILY SSF53748 3 391 1.53E-141 T 15-10-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Trad_2319 d399c1127f121e733ca7afcf675a87a9 392 Pfam PF00162 Phosphoglycerate kinase 6 382 9.1E-145 T 15-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Trad_2319 d399c1127f121e733ca7afcf675a87a9 392 Gene3D G3DSA:3.40.50.1260 7 390 7.3E-148 T 15-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Trad_2319 d399c1127f121e733ca7afcf675a87a9 392 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 4 392 40.505 T 15-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Trad_2319 d399c1127f121e733ca7afcf675a87a9 392 PIRSF PIRSF000724 1 392 8.1E-136 T 15-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Trad_2319 d399c1127f121e733ca7afcf675a87a9 392 PRINTS PR00477 Phosphoglycerate kinase family signature 9 25 7.2E-88 T 15-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Trad_2319 d399c1127f121e733ca7afcf675a87a9 392 PRINTS PR00477 Phosphoglycerate kinase family signature 345 356 7.2E-88 T 15-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Trad_2319 d399c1127f121e733ca7afcf675a87a9 392 PRINTS PR00477 Phosphoglycerate kinase family signature 190 209 7.2E-88 T 15-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Trad_2319 d399c1127f121e733ca7afcf675a87a9 392 PRINTS PR00477 Phosphoglycerate kinase family signature 368 385 7.2E-88 T 15-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Trad_2319 d399c1127f121e733ca7afcf675a87a9 392 PRINTS PR00477 Phosphoglycerate kinase family signature 137 159 7.2E-88 T 15-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Trad_2319 d399c1127f121e733ca7afcf675a87a9 392 PRINTS PR00477 Phosphoglycerate kinase family signature 109 124 7.2E-88 T 15-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Trad_2319 d399c1127f121e733ca7afcf675a87a9 392 PRINTS PR00477 Phosphoglycerate kinase family signature 167 189 7.2E-88 T 15-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Trad_2319 d399c1127f121e733ca7afcf675a87a9 392 PRINTS PR00477 Phosphoglycerate kinase family signature 312 337 7.2E-88 T 15-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Trad_2319 d399c1127f121e733ca7afcf675a87a9 392 PRINTS PR00477 Phosphoglycerate kinase family signature 30 52 7.2E-88 T 15-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Trad_2319 d399c1127f121e733ca7afcf675a87a9 392 Gene3D G3DSA:3.40.50.1260 169 382 7.3E-148 T 15-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Trad_2935 caa506025e73b448e723260cce8e1320 379 Gene3D G3DSA:3.30.565.10 207 365 7.7E-44 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Trad_2935 caa506025e73b448e723260cce8e1320 379 SUPERFAMILY SSF47384 125 209 1.63E-23 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Trad_2935 caa506025e73b448e723260cce8e1320 379 Pfam PF00512 His Kinase A (phospho-acceptor) domain 141 208 8.3E-20 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Trad_2935 caa506025e73b448e723260cce8e1320 379 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 253 363 2.3E-26 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Trad_2935 caa506025e73b448e723260cce8e1320 379 Gene3D G3DSA:1.10.287.130 110 206 1.4E-26 T 15-10-2018 Trad_2935 caa506025e73b448e723260cce8e1320 379 SUPERFAMILY SSF55874 197 367 5.63E-49 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Trad_2935 caa506025e73b448e723260cce8e1320 379 PRINTS PR00344 Bacterial sensor protein C-terminal signature 290 304 3.6E-19 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Trad_2935 caa506025e73b448e723260cce8e1320 379 PRINTS PR00344 Bacterial sensor protein C-terminal signature 325 343 3.6E-19 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Trad_2935 caa506025e73b448e723260cce8e1320 379 PRINTS PR00344 Bacterial sensor protein C-terminal signature 349 362 3.6E-19 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Trad_2935 caa506025e73b448e723260cce8e1320 379 PRINTS PR00344 Bacterial sensor protein C-terminal signature 308 318 3.6E-19 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Trad_2935 caa506025e73b448e723260cce8e1320 379 SUPERFAMILY SSF55785 10 105 1.75E-6 T 15-10-2018 IPR035965 PAS domain superfamily Trad_2935 caa506025e73b448e723260cce8e1320 379 SMART SM00387 253 365 2.2E-37 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Trad_2935 caa506025e73b448e723260cce8e1320 379 SMART SM00388 140 208 4.8E-23 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Trad_1282 e2e61aa01ab57454338f46701df5c2ea 314 SMART SM00382 105 288 1.1E-9 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_1282 e2e61aa01ab57454338f46701df5c2ea 314 SUPERFAMILY SSF52540 105 308 6.42E-50 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_1282 e2e61aa01ab57454338f46701df5c2ea 314 Pfam PF00448 SRP54-type protein, GTPase domain 107 306 2.0E-75 T 15-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Trad_1282 e2e61aa01ab57454338f46701df5c2ea 314 Gene3D G3DSA:1.20.120.140 4 305 1.4E-104 T 15-10-2018 Trad_1282 e2e61aa01ab57454338f46701df5c2ea 314 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 280 293 - T 15-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Trad_1282 e2e61aa01ab57454338f46701df5c2ea 314 Gene3D G3DSA:3.40.50.300 90 295 1.4E-104 T 15-10-2018 Trad_1282 e2e61aa01ab57454338f46701df5c2ea 314 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 27 307 56.847 T 15-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 Trad_1282 e2e61aa01ab57454338f46701df5c2ea 314 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 31 306 2.7E-97 T 15-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 Trad_1282 e2e61aa01ab57454338f46701df5c2ea 314 SMART SM00962 106 307 1.8E-111 T 15-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Trad_1282 e2e61aa01ab57454338f46701df5c2ea 314 SUPERFAMILY SSF47364 1 64 2.49E-9 T 15-10-2018 IPR036225 SRP/SRP receptor, N-terminal Reactome: R-HSA-1799339 Trad_0231 b8cd3ac752a1d1623da8f687a349c91a 232 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 4 228 1.1E-71 T 15-10-2018 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 Trad_0231 b8cd3ac752a1d1623da8f687a349c91a 232 SUPERFAMILY SSF51366 3 229 2.75E-59 T 15-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Trad_0231 b8cd3ac752a1d1623da8f687a349c91a 232 Pfam PF00977 Histidine biosynthesis protein 3 226 6.5E-67 T 15-10-2018 IPR006062 Histidine biosynthesis GO:0000105 Trad_0231 b8cd3ac752a1d1623da8f687a349c91a 232 Gene3D G3DSA:3.20.20.70 1 232 4.0E-78 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Trad_0231 b8cd3ac752a1d1623da8f687a349c91a 232 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 3 232 30.928 T 15-10-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 Trad_2174 142a82fb9fb3b5b40bac27731747af1a 296 Pfam PF02540 NAD synthase 39 276 6.6E-59 T 15-10-2018 IPR022310 NAD/GMP synthase Trad_2174 142a82fb9fb3b5b40bac27731747af1a 296 TIGRFAM TIGR00552 nadE: NAD+ synthetase 37 278 1.8E-56 T 15-10-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 Trad_2174 142a82fb9fb3b5b40bac27731747af1a 296 SUPERFAMILY SSF52402 28 278 2.21E-63 T 15-10-2018 Trad_2174 142a82fb9fb3b5b40bac27731747af1a 296 Gene3D G3DSA:3.40.50.620 29 280 3.5E-67 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Trad_1855 b24685a0bf31699ad9f0070f2b55dee3 389 Gene3D G3DSA:3.40.50.2000 24 369 7.4E-100 T 15-10-2018 Trad_1855 b24685a0bf31699ad9f0070f2b55dee3 389 SUPERFAMILY SSF53756 1 373 3.04E-88 T 15-10-2018 Trad_1855 b24685a0bf31699ad9f0070f2b55dee3 389 TIGRFAM TIGR03999 thiol_BshA: N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA 1 373 7.7E-148 T 15-10-2018 IPR023881 N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA GO:0016757|GO:0071793 Trad_1855 b24685a0bf31699ad9f0070f2b55dee3 389 Pfam PF13439 Glycosyltransferase Family 4 11 180 5.5E-27 T 15-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Trad_1855 b24685a0bf31699ad9f0070f2b55dee3 389 Pfam PF00534 Glycosyl transferases group 1 188 351 6.2E-38 T 15-10-2018 IPR001296 Glycosyl transferase, family 1 Trad_1855 b24685a0bf31699ad9f0070f2b55dee3 389 Gene3D G3DSA:3.40.50.2000 176 356 7.4E-100 T 15-10-2018 Trad_2343 4516fdfe5eef8968d4c7892b0899ce51 253 Gene3D G3DSA:3.40.50.300 1 242 6.7E-65 T 15-10-2018 Trad_2343 4516fdfe5eef8968d4c7892b0899ce51 253 SMART SM00382 28 210 8.1E-13 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_2343 4516fdfe5eef8968d4c7892b0899ce51 253 Pfam PF00005 ABC transporter 19 163 5.7E-26 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Trad_2343 4516fdfe5eef8968d4c7892b0899ce51 253 SUPERFAMILY SSF52540 4 224 3.72E-59 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_1647 d41b431983da2432702b223eed754921 486 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 205 223 8.5E-25 T 15-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 Trad_1647 d41b431983da2432702b223eed754921 486 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 29 40 8.5E-25 T 15-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 Trad_1647 d41b431983da2432702b223eed754921 486 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 65 74 8.5E-25 T 15-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 Trad_1647 d41b431983da2432702b223eed754921 486 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 236 257 8.5E-25 T 15-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 Trad_1647 d41b431983da2432702b223eed754921 486 SMART SM00840 359 423 1.7E-15 T 15-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 Trad_1647 d41b431983da2432702b223eed754921 486 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 6 476 4.2E-140 T 15-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 Trad_1647 d41b431983da2432702b223eed754921 486 SUPERFAMILY SSF47323 348 476 8.89E-31 T 15-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Trad_1647 d41b431983da2432702b223eed754921 486 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 19 325 4.5E-100 T 15-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 Trad_1647 d41b431983da2432702b223eed754921 486 Gene3D G3DSA:1.20.120.640 319 476 4.4E-35 T 15-10-2018 Trad_1647 d41b431983da2432702b223eed754921 486 Gene3D G3DSA:3.40.50.620 5 318 2.4E-124 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Trad_1647 d41b431983da2432702b223eed754921 486 Pfam PF09190 DALR domain 359 420 4.6E-14 T 15-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 Trad_1647 d41b431983da2432702b223eed754921 486 SUPERFAMILY SSF52374 7 322 1.64E-82 T 15-10-2018 Trad_1647 d41b431983da2432702b223eed754921 486 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 6 477 36.17 T 15-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 Trad_1404 85b7768333190bcf64df3b9ffc9d1644 360 SUPERFAMILY SSF53187 4 350 7.65E-46 T 15-10-2018 Trad_1404 85b7768333190bcf64df3b9ffc9d1644 360 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 58 67 - T 15-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 Trad_1404 85b7768333190bcf64df3b9ffc9d1644 360 TIGRFAM TIGR01902 dapE-lys-deAc: N-acetyl-ornithine/N-acetyl-lysine deacetylase 7 352 4.6E-103 T 15-10-2018 IPR010175 [LysW]-lysine/[LysW]-ornithine hydrolase GO:0005737|GO:0008270|GO:0009085|GO:0016811|GO:0050897 Trad_1404 85b7768333190bcf64df3b9ffc9d1644 360 Pfam PF01546 Peptidase family M20/M25/M40 61 347 4.1E-28 T 15-10-2018 IPR002933 Peptidase M20 GO:0016787 Trad_1404 85b7768333190bcf64df3b9ffc9d1644 360 Gene3D G3DSA:3.40.630.10 12 339 1.1E-100 T 15-10-2018 Trad_1404 85b7768333190bcf64df3b9ffc9d1644 360 Gene3D G3DSA:3.30.70.360 157 264 1.1E-100 T 15-10-2018 Trad_1404 85b7768333190bcf64df3b9ffc9d1644 360 Hamap MF_01120 [LysW]-lysine/[LysW]-ornithine hydrolase [lysK]. 2 350 30.188 T 15-10-2018 IPR010175 [LysW]-lysine/[LysW]-ornithine hydrolase GO:0005737|GO:0008270|GO:0009085|GO:0016811|GO:0050897 Trad_0848 1e91ad6cd785291006439c0865d93c84 363 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 11 93 2.7E-5 T 15-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 Trad_0848 1e91ad6cd785291006439c0865d93c84 363 PIRSF PIRSF016578 1 363 4.6E-23 T 15-10-2018 Trad_0848 1e91ad6cd785291006439c0865d93c84 363 Gene3D G3DSA:1.10.540.10 1 106 1.2E-17 T 15-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 Trad_0848 1e91ad6cd785291006439c0865d93c84 363 Gene3D G3DSA:1.20.140.10 217 361 3.1E-31 T 15-10-2018 Trad_0848 1e91ad6cd785291006439c0865d93c84 363 Gene3D G3DSA:2.40.110.10 109 211 1.4E-16 T 15-10-2018 Trad_0848 1e91ad6cd785291006439c0865d93c84 363 SUPERFAMILY SSF47203 222 363 2.9E-27 T 15-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 Trad_0848 1e91ad6cd785291006439c0865d93c84 363 SUPERFAMILY SSF56645 6 210 6.54E-36 T 15-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 Trad_0848 1e91ad6cd785291006439c0865d93c84 363 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 223 342 7.8E-17 T 15-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 Trad_2117 abb6b5d3f41b520b27fc918933354397 319 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 24 83 3.5E-11 T 15-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Trad_2117 abb6b5d3f41b520b27fc918933354397 319 SUPERFAMILY SSF51735 107 276 3.27E-47 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_2117 abb6b5d3f41b520b27fc918933354397 319 Pfam PF00107 Zinc-binding dehydrogenase 147 259 6.1E-28 T 15-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Trad_2117 abb6b5d3f41b520b27fc918933354397 319 Gene3D G3DSA:3.90.180.10 9 316 8.4E-110 T 15-10-2018 Trad_2117 abb6b5d3f41b520b27fc918933354397 319 SUPERFAMILY SSF50129 8 141 1.0E-38 T 15-10-2018 IPR011032 GroES-like superfamily Trad_2117 abb6b5d3f41b520b27fc918933354397 319 Gene3D G3DSA:3.40.50.720 116 255 8.4E-110 T 15-10-2018 Trad_2117 abb6b5d3f41b520b27fc918933354397 319 TIGRFAM TIGR02824 quinone_pig3: putative NAD(P)H quinone oxidoreductase, PIG3 family 5 318 1.1E-127 T 15-10-2018 IPR014189 Quinone oxidoreductase PIG3 Reactome: R-HSA-6803205 Trad_2117 abb6b5d3f41b520b27fc918933354397 319 SMART SM00829 7 316 4.8E-60 T 15-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Trad_1796 49b89d9b88a0d02f4ed71cdc5b70885f 603 SUPERFAMILY SSF55874 472 596 8.25E-20 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Trad_1796 49b89d9b88a0d02f4ed71cdc5b70885f 603 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 507 596 1.3E-9 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Trad_1796 49b89d9b88a0d02f4ed71cdc5b70885f 603 Gene3D G3DSA:3.30.565.10 464 599 1.1E-31 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Trad_1796 49b89d9b88a0d02f4ed71cdc5b70885f 603 Gene3D G3DSA:3.30.450.20 29 143 5.7E-26 T 15-10-2018 Trad_1796 49b89d9b88a0d02f4ed71cdc5b70885f 603 Pfam PF08448 PAS fold 30 137 1.3E-12 T 15-10-2018 IPR013656 PAS fold-4 Trad_1796 49b89d9b88a0d02f4ed71cdc5b70885f 603 SUPERFAMILY SSF55785 30 143 1.83E-24 T 15-10-2018 IPR035965 PAS domain superfamily Trad_1796 49b89d9b88a0d02f4ed71cdc5b70885f 603 Pfam PF07730 Histidine kinase 406 467 1.1E-14 T 15-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 Trad_1796 49b89d9b88a0d02f4ed71cdc5b70885f 603 SUPERFAMILY SSF55785 263 390 7.2E-23 T 15-10-2018 IPR035965 PAS domain superfamily Trad_1796 49b89d9b88a0d02f4ed71cdc5b70885f 603 SUPERFAMILY SSF55785 157 275 7.99E-15 T 15-10-2018 IPR035965 PAS domain superfamily Trad_1796 49b89d9b88a0d02f4ed71cdc5b70885f 603 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 19 142 1.1E-21 T 15-10-2018 IPR000014 PAS domain Trad_1796 49b89d9b88a0d02f4ed71cdc5b70885f 603 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 298 399 1.9E-14 T 15-10-2018 IPR000014 PAS domain Trad_1796 49b89d9b88a0d02f4ed71cdc5b70885f 603 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 142 273 1.9E-10 T 15-10-2018 IPR000014 PAS domain Trad_1796 49b89d9b88a0d02f4ed71cdc5b70885f 603 SMART SM00387 504 598 1.7E-10 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Trad_1796 49b89d9b88a0d02f4ed71cdc5b70885f 603 Pfam PF00989 PAS fold 285 386 1.1E-8 T 15-10-2018 IPR013767 PAS fold GO:0006355 Trad_1796 49b89d9b88a0d02f4ed71cdc5b70885f 603 PRINTS PR00344 Bacterial sensor protein C-terminal signature 540 554 9.1E-5 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Trad_1796 49b89d9b88a0d02f4ed71cdc5b70885f 603 PRINTS PR00344 Bacterial sensor protein C-terminal signature 558 576 9.1E-5 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Trad_1796 49b89d9b88a0d02f4ed71cdc5b70885f 603 PRINTS PR00344 Bacterial sensor protein C-terminal signature 582 595 9.1E-5 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Trad_1796 49b89d9b88a0d02f4ed71cdc5b70885f 603 Gene3D G3DSA:3.30.450.20 144 282 1.3E-17 T 15-10-2018 Trad_1796 49b89d9b88a0d02f4ed71cdc5b70885f 603 SMART SM00091 143 209 0.014 T 15-10-2018 IPR000014 PAS domain Trad_1796 49b89d9b88a0d02f4ed71cdc5b70885f 603 SMART SM00091 278 345 3.3E-6 T 15-10-2018 IPR000014 PAS domain Trad_1796 49b89d9b88a0d02f4ed71cdc5b70885f 603 SMART SM00091 19 85 7.5E-9 T 15-10-2018 IPR000014 PAS domain Trad_1796 49b89d9b88a0d02f4ed71cdc5b70885f 603 SMART SM00086 350 392 5.3E-4 T 15-10-2018 IPR001610 PAC motif Trad_1796 49b89d9b88a0d02f4ed71cdc5b70885f 603 SMART SM00086 95 135 28.0 T 15-10-2018 IPR001610 PAC motif Trad_1796 49b89d9b88a0d02f4ed71cdc5b70885f 603 Gene3D G3DSA:3.30.450.20 283 412 2.5E-20 T 15-10-2018 Trad_1796 49b89d9b88a0d02f4ed71cdc5b70885f 603 Pfam PF13426 PAS domain 156 238 2.7E-5 T 15-10-2018 IPR000014 PAS domain Trad_0327 d83bb8ad4c7e5bde60bce47adc6aebef 779 Gene3D G3DSA:1.25.40.10 297 517 5.0E-14 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Trad_0327 d83bb8ad4c7e5bde60bce47adc6aebef 779 SMART SM00028 395 428 12.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Trad_0327 d83bb8ad4c7e5bde60bce47adc6aebef 779 SMART SM00028 429 462 25.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Trad_0327 d83bb8ad4c7e5bde60bce47adc6aebef 779 Pfam PF13181 Tetratricopeptide repeat 397 426 0.1 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Trad_0327 d83bb8ad4c7e5bde60bce47adc6aebef 779 SUPERFAMILY SSF48452 354 511 1.87E-15 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Trad_1888 1c60b22151100a923c24fe830e13f40d 491 TIGRFAM TIGR02309 HpaB-1: 4-hydroxyphenylacetate 3-monooxygenase, oxygenase component 3 479 1.4E-231 T 15-10-2018 IPR012687 4-HPA 3-monooxygenase large component, Deinococcus-type GO:0010124|GO:0016712|GO:0050660 KEGG: 00350+1.14.14.9|MetaCyc: PWY-7431 Trad_1888 1c60b22151100a923c24fe830e13f40d 491 Gene3D G3DSA:1.10.3140.10 3 145 5.9E-52 T 15-10-2018 Trad_1888 1c60b22151100a923c24fe830e13f40d 491 SUPERFAMILY SSF47203 263 477 2.72E-59 T 15-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 Trad_1888 1c60b22151100a923c24fe830e13f40d 491 SUPERFAMILY SSF56645 4 272 2.09E-78 T 15-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 Trad_1888 1c60b22151100a923c24fe830e13f40d 491 Gene3D G3DSA:1.20.140.10 275 488 1.7E-79 T 15-10-2018 Trad_1888 1c60b22151100a923c24fe830e13f40d 491 Pfam PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal 279 477 1.9E-63 T 15-10-2018 IPR024719 HpaB/PvcC/4-BUDH C-terminal Trad_1888 1c60b22151100a923c24fe830e13f40d 491 PIRSF PIRSF000331 1 488 1.4E-172 T 15-10-2018 IPR004925 HpaB/PvcC/4-BUDH Trad_1888 1c60b22151100a923c24fe830e13f40d 491 Gene3D G3DSA:2.40.110.10 146 273 3.0E-43 T 15-10-2018 Trad_1888 1c60b22151100a923c24fe830e13f40d 491 Pfam PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal 5 272 2.2E-98 T 15-10-2018 IPR024674 HpaB/PvcC/4-BUDH N-terminal Trad_0440 575a03efc648e36e450fe1de762ebfe1 740 SMART SM00028 509 542 0.074 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Trad_0440 575a03efc648e36e450fe1de762ebfe1 740 SMART SM00028 209 242 24.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Trad_0440 575a03efc648e36e450fe1de762ebfe1 740 SMART SM00028 646 679 3.8E-6 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Trad_0440 575a03efc648e36e450fe1de762ebfe1 740 SMART SM00028 612 645 27.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Trad_0440 575a03efc648e36e450fe1de762ebfe1 740 SMART SM00028 307 340 14.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Trad_0440 575a03efc648e36e450fe1de762ebfe1 740 SMART SM00028 341 374 470.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Trad_0440 575a03efc648e36e450fe1de762ebfe1 740 SMART SM00028 406 439 23.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Trad_0440 575a03efc648e36e450fe1de762ebfe1 740 SMART SM00028 243 276 0.51 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Trad_0440 575a03efc648e36e450fe1de762ebfe1 740 SMART SM00028 680 713 6.3E-5 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Trad_0440 575a03efc648e36e450fe1de762ebfe1 740 SMART SM00028 440 473 7.8 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Trad_0440 575a03efc648e36e450fe1de762ebfe1 740 Pfam PF13432 Tetratricopeptide repeat 655 712 1.2E-10 T 15-10-2018 Trad_0440 575a03efc648e36e450fe1de762ebfe1 740 Pfam PF13432 Tetratricopeptide repeat 288 340 0.0011 T 15-10-2018 Trad_0440 575a03efc648e36e450fe1de762ebfe1 740 Pfam PF13432 Tetratricopeptide repeat 480 517 0.0037 T 15-10-2018 Trad_0440 575a03efc648e36e450fe1de762ebfe1 740 Pfam PF14559 Tetratricopeptide repeat 420 474 1.8E-9 T 15-10-2018 Trad_0440 575a03efc648e36e450fe1de762ebfe1 740 Gene3D G3DSA:1.25.40.10 324 392 6.9E-6 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Trad_0440 575a03efc648e36e450fe1de762ebfe1 740 Gene3D G3DSA:1.25.40.10 191 323 7.6E-14 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Trad_0440 575a03efc648e36e450fe1de762ebfe1 740 SUPERFAMILY SSF48452 387 714 3.04E-33 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Trad_0440 575a03efc648e36e450fe1de762ebfe1 740 Gene3D G3DSA:1.25.40.10 395 478 1.3E-10 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Trad_0440 575a03efc648e36e450fe1de762ebfe1 740 Gene3D G3DSA:1.25.40.10 479 556 1.2E-10 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Trad_0440 575a03efc648e36e450fe1de762ebfe1 740 Gene3D G3DSA:1.25.40.10 557 725 4.4E-29 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Trad_0440 575a03efc648e36e450fe1de762ebfe1 740 SUPERFAMILY SSF48452 216 472 1.2E-17 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Trad_0076 b3d80d0c4dac4c8da5a0211c2aa603c7 519 PIRSF PIRSF000414 1 519 4.1E-185 T 15-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Trad_0076 b3d80d0c4dac4c8da5a0211c2aa603c7 519 SMART SM00798 130 454 1.6E-150 T 15-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Trad_0076 b3d80d0c4dac4c8da5a0211c2aa603c7 519 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 1 519 40.24 T 15-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Trad_0076 b3d80d0c4dac4c8da5a0211c2aa603c7 519 Gene3D G3DSA:3.40.140.20 212 368 5.4E-47 T 15-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Trad_0076 b3d80d0c4dac4c8da5a0211c2aa603c7 519 Gene3D G3DSA:3.40.140.20 387 519 2.1E-52 T 15-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Trad_0076 b3d80d0c4dac4c8da5a0211c2aa603c7 519 SUPERFAMILY SSF52335 2 187 4.21E-61 T 15-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily Trad_0076 b3d80d0c4dac4c8da5a0211c2aa603c7 519 Pfam PF02142 MGS-like domain 13 124 2.6E-23 T 15-10-2018 IPR011607 Methylglyoxal synthase-like domain Trad_0076 b3d80d0c4dac4c8da5a0211c2aa603c7 519 Gene3D G3DSA:3.40.50.1380 1 191 4.8E-79 T 15-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily Trad_0076 b3d80d0c4dac4c8da5a0211c2aa603c7 519 SMART SM00851 12 125 6.2E-45 T 15-10-2018 IPR011607 Methylglyoxal synthase-like domain Trad_0076 b3d80d0c4dac4c8da5a0211c2aa603c7 519 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 2 519 1.7E-173 T 15-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Trad_0076 b3d80d0c4dac4c8da5a0211c2aa603c7 519 SUPERFAMILY SSF53927 215 519 2.91E-110 T 15-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 Trad_0076 b3d80d0c4dac4c8da5a0211c2aa603c7 519 Pfam PF01808 AICARFT/IMPCHase bienzyme 130 453 7.3E-104 T 15-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Trad_0273 74002514bfa35f3c096b952328dba2a6 598 Pfam PF00570 HRDC domain 527 593 9.4E-23 T 15-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 Trad_0273 74002514bfa35f3c096b952328dba2a6 598 Gene3D G3DSA:1.10.10.10 334 518 7.2E-50 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Trad_0273 74002514bfa35f3c096b952328dba2a6 598 SUPERFAMILY SSF52540 5 188 8.42E-41 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_0273 74002514bfa35f3c096b952328dba2a6 598 SMART SM00341 523 597 1.3E-14 T 15-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 Trad_0273 74002514bfa35f3c096b952328dba2a6 598 Pfam PF16124 RecQ zinc-binding 336 398 1.5E-19 T 15-10-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain Trad_0273 74002514bfa35f3c096b952328dba2a6 598 Gene3D G3DSA:1.10.150.80 525 595 7.9E-24 T 15-10-2018 Trad_0273 74002514bfa35f3c096b952328dba2a6 598 Pfam PF00270 DEAD/DEAH box helicase 21 177 1.5E-16 T 15-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Trad_0273 74002514bfa35f3c096b952328dba2a6 598 Gene3D G3DSA:3.40.50.300 201 333 2.0E-38 T 15-10-2018 Trad_0273 74002514bfa35f3c096b952328dba2a6 598 Gene3D G3DSA:3.40.50.300 1 200 1.3E-81 T 15-10-2018 Trad_0273 74002514bfa35f3c096b952328dba2a6 598 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 5 595 1.4E-242 T 15-10-2018 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 Trad_0273 74002514bfa35f3c096b952328dba2a6 598 SUPERFAMILY SSF52540 200 452 4.43E-62 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_0273 74002514bfa35f3c096b952328dba2a6 598 Pfam PF00271 Helicase conserved C-terminal domain 223 323 1.4E-14 T 15-10-2018 IPR001650 Helicase, C-terminal Trad_0273 74002514bfa35f3c096b952328dba2a6 598 SMART SM00956 405 508 4.4E-53 T 15-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 Trad_0273 74002514bfa35f3c096b952328dba2a6 598 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 8 455 1.9E-154 T 15-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 Trad_0273 74002514bfa35f3c096b952328dba2a6 598 SUPERFAMILY SSF47819 521 595 4.8E-23 T 15-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 Trad_0273 74002514bfa35f3c096b952328dba2a6 598 SMART SM00487 14 210 2.5E-28 T 15-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Trad_0273 74002514bfa35f3c096b952328dba2a6 598 SMART SM00490 243 324 7.8E-23 T 15-10-2018 IPR001650 Helicase, C-terminal Trad_0273 74002514bfa35f3c096b952328dba2a6 598 Pfam PF09382 RQC domain 401 511 2.8E-38 T 15-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 Trad_0503 97c998177318a60129f111541445aae8 186 Gene3D G3DSA:2.160.20.70 67 186 1.5E-34 T 15-10-2018 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 Trad_0503 97c998177318a60129f111541445aae8 186 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 1 185 15.751 T 15-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 Trad_0503 97c998177318a60129f111541445aae8 186 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 84 180 1.1E-27 T 15-10-2018 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 Trad_0503 97c998177318a60129f111541445aae8 186 SUPERFAMILY SSF63848 81 185 9.55E-28 T 15-10-2018 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily GO:0000902 Trad_1104 b82b1f2394a549c52b61ba77e1a6baad 399 Pfam PF00149 Calcineurin-like phosphoesterase 1 226 2.3E-13 T 15-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 Trad_1104 b82b1f2394a549c52b61ba77e1a6baad 399 SUPERFAMILY SSF56300 1 270 8.2E-51 T 15-10-2018 Trad_1104 b82b1f2394a549c52b61ba77e1a6baad 399 Gene3D G3DSA:3.60.21.10 1 275 1.4E-70 T 15-10-2018 IPR029052 Metallo-dependent phosphatase-like Trad_1104 b82b1f2394a549c52b61ba77e1a6baad 399 TIGRFAM TIGR00619 sbcd: exonuclease SbcCD, D subunit 1 256 1.2E-53 T 15-10-2018 IPR004593 Nuclease SbcCD subunit D GO:0004519|GO:0006259|GO:0008408 Trad_2897 79fb43464b1d962b02c220bbbaf010a3 274 SUPERFAMILY SSF102588 26 262 2.49E-49 T 15-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 Trad_2897 79fb43464b1d962b02c220bbbaf010a3 274 Pfam PF02585 GlcNAc-PI de-N-acetylase 28 167 4.0E-29 T 15-10-2018 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related Reactome: R-HSA-162710 Trad_2897 79fb43464b1d962b02c220bbbaf010a3 274 Gene3D G3DSA:3.40.50.10320 22 269 1.6E-44 T 15-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 Trad_1735 8c30162665d9da27802a7d016d95eb23 321 SUPERFAMILY SSF53850 19 314 7.06E-61 T 15-10-2018 Trad_1735 8c30162665d9da27802a7d016d95eb23 321 Gene3D G3DSA:3.40.190.10 126 300 5.9E-66 T 15-10-2018 Trad_1735 8c30162665d9da27802a7d016d95eb23 321 Pfam PF13531 Bacterial extracellular solute-binding protein 35 275 3.9E-29 T 15-10-2018 Trad_1735 8c30162665d9da27802a7d016d95eb23 321 Gene3D G3DSA:3.40.190.10 25 288 5.9E-66 T 15-10-2018 Trad_1735 8c30162665d9da27802a7d016d95eb23 321 PIRSF PIRSF002825 3 316 1.1E-58 T 15-10-2018 IPR026045 Ferric binding protein Trad_2703 0adb502865eae5a495afe80ca3f65ecf 362 SUPERFAMILY SSF51395 2 355 2.96E-97 T 15-10-2018 Trad_2703 0adb502865eae5a495afe80ca3f65ecf 362 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 293 313 - T 15-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 Trad_2703 0adb502865eae5a495afe80ca3f65ecf 362 Pfam PF01180 Dihydroorotate dehydrogenase 49 341 1.1E-84 T 15-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 Trad_2703 0adb502865eae5a495afe80ca3f65ecf 362 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 84 103 - T 15-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 Trad_2703 0adb502865eae5a495afe80ca3f65ecf 362 Gene3D G3DSA:3.20.20.70 2 357 3.6E-122 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Trad_2703 0adb502865eae5a495afe80ca3f65ecf 362 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 2 351 2.2E-119 T 15-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 Trad_2703 0adb502865eae5a495afe80ca3f65ecf 362 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 1 337 46.923 T 15-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 Trad_1408 87533b1b5402733ce2b4e407d80b2a63 311 SMART SM00271 6 64 1.5E-31 T 15-10-2018 IPR001623 DnaJ domain Trad_1408 87533b1b5402733ce2b4e407d80b2a63 311 Pfam PF00226 DnaJ domain 7 69 2.7E-27 T 15-10-2018 IPR001623 DnaJ domain Trad_1408 87533b1b5402733ce2b4e407d80b2a63 311 ProSitePatterns PS00636 Nt-dnaJ domain signature. 49 68 - T 15-10-2018 IPR018253 DnaJ domain, conserved site Trad_1408 87533b1b5402733ce2b4e407d80b2a63 311 SUPERFAMILY SSF46565 5 92 1.7E-29 T 15-10-2018 IPR036869 Chaperone J-domain superfamily Trad_1408 87533b1b5402733ce2b4e407d80b2a63 311 Gene3D G3DSA:1.10.287.110 4 124 8.4E-30 T 15-10-2018 IPR036869 Chaperone J-domain superfamily Trad_1408 87533b1b5402733ce2b4e407d80b2a63 311 PRINTS PR00625 DnaJ domain signature 44 64 6.1E-23 T 15-10-2018 IPR001623 DnaJ domain Trad_1408 87533b1b5402733ce2b4e407d80b2a63 311 PRINTS PR00625 DnaJ domain signature 64 83 6.1E-23 T 15-10-2018 IPR001623 DnaJ domain Trad_1408 87533b1b5402733ce2b4e407d80b2a63 311 PRINTS PR00625 DnaJ domain signature 9 27 6.1E-23 T 15-10-2018 IPR001623 DnaJ domain Trad_1408 87533b1b5402733ce2b4e407d80b2a63 311 PRINTS PR00625 DnaJ domain signature 27 42 6.1E-23 T 15-10-2018 IPR001623 DnaJ domain Trad_1408 87533b1b5402733ce2b4e407d80b2a63 311 SUPERFAMILY SSF49493 133 235 1.57E-9 T 15-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 Trad_1827 ccf2e4feac189106be7aab6081a5628a 358 Gene3D G3DSA:3.40.50.2300 178 306 2.2E-67 T 15-10-2018 Trad_1827 ccf2e4feac189106be7aab6081a5628a 358 SMART SM00354 17 87 1.7E-20 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Trad_1827 ccf2e4feac189106be7aab6081a5628a 358 Pfam PF00356 Bacterial regulatory proteins, lacI family 19 64 2.7E-14 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Trad_1827 ccf2e4feac189106be7aab6081a5628a 358 Pfam PF13377 Periplasmic binding protein-like domain 186 344 4.2E-37 T 15-10-2018 Trad_1827 ccf2e4feac189106be7aab6081a5628a 358 Gene3D G3DSA:3.40.50.2300 71 323 2.2E-67 T 15-10-2018 Trad_1827 ccf2e4feac189106be7aab6081a5628a 358 ProSitePatterns PS00356 LacI-type HTH domain signature. 20 38 - T 15-10-2018 Trad_1827 ccf2e4feac189106be7aab6081a5628a 358 SUPERFAMILY SSF47413 16 75 4.34E-16 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Trad_1827 ccf2e4feac189106be7aab6081a5628a 358 SUPERFAMILY SSF53822 88 348 1.99E-63 T 15-10-2018 IPR028082 Periplasmic binding protein-like I Trad_1827 ccf2e4feac189106be7aab6081a5628a 358 Gene3D G3DSA:1.10.260.40 10 70 3.8E-21 T 15-10-2018 Trad_2330 10eef3e82515101fe7a1e9f81cfa976e 267 SUPERFAMILY SSF51366 2 246 6.22E-78 T 15-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Trad_2330 10eef3e82515101fe7a1e9f81cfa976e 267 Gene3D G3DSA:3.20.20.70 3 266 1.3E-93 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Trad_2330 10eef3e82515101fe7a1e9f81cfa976e 267 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 47 60 - T 15-10-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Trad_2330 10eef3e82515101fe7a1e9f81cfa976e 267 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 259 35.029 T 15-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Trad_2330 10eef3e82515101fe7a1e9f81cfa976e 267 Pfam PF00290 Tryptophan synthase alpha chain 8 245 5.4E-83 T 15-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Trad_2330 10eef3e82515101fe7a1e9f81cfa976e 267 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 246 1.2E-73 T 15-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Trad_1354 e847018865ec7e2100eb4a1ae604cfdf 610 SUPERFAMILY SSF53697 249 610 1.02E-107 T 15-10-2018 Trad_1354 e847018865ec7e2100eb4a1ae604cfdf 610 Gene3D G3DSA:3.40.50.10490 448 595 3.0E-143 T 15-10-2018 Trad_1354 e847018865ec7e2100eb4a1ae604cfdf 610 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 610 1.7E-252 T 15-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 Trad_1354 e847018865ec7e2100eb4a1ae604cfdf 610 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 610 41.488 T 15-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 Trad_1354 e847018865ec7e2100eb4a1ae604cfdf 610 Gene3D G3DSA:3.60.20.10 2 244 7.0E-73 T 15-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Trad_1354 e847018865ec7e2100eb4a1ae604cfdf 610 Pfam PF01380 SIS domain 465 591 4.5E-24 T 15-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 Trad_1354 e847018865ec7e2100eb4a1ae604cfdf 610 Pfam PF01380 SIS domain 295 418 3.2E-29 T 15-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 Trad_1354 e847018865ec7e2100eb4a1ae604cfdf 610 Pfam PF13522 Glutamine amidotransferase domain 69 188 6.9E-21 T 15-10-2018 Trad_1354 e847018865ec7e2100eb4a1ae604cfdf 610 SUPERFAMILY SSF56235 2 240 2.4E-68 T 15-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Trad_1354 e847018865ec7e2100eb4a1ae604cfdf 610 Gene3D G3DSA:3.40.50.10490 253 609 3.0E-143 T 15-10-2018 Trad_0984 cba7eaece12f35658c367ee0a971b42a 275 Gene3D G3DSA:3.30.230.10 1 156 9.0E-45 T 15-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Trad_0984 cba7eaece12f35658c367ee0a971b42a 275 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 3 274 29.547 T 15-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 Trad_0984 cba7eaece12f35658c367ee0a971b42a 275 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 2 254 7.2E-49 T 15-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 Trad_0984 cba7eaece12f35658c367ee0a971b42a 275 Pfam PF08544 GHMP kinases C terminal 212 262 4.1E-7 T 15-10-2018 IPR013750 GHMP kinase, C-terminal domain Trad_0984 cba7eaece12f35658c367ee0a971b42a 275 PIRSF PIRSF010376 1 275 3.6E-73 T 15-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 Trad_0984 cba7eaece12f35658c367ee0a971b42a 275 SUPERFAMILY SSF55060 158 270 2.59E-22 T 15-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily Trad_0984 cba7eaece12f35658c367ee0a971b42a 275 SUPERFAMILY SSF54211 3 156 3.87E-32 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Trad_0984 cba7eaece12f35658c367ee0a971b42a 275 Gene3D G3DSA:3.30.70.890 158 275 3.2E-27 T 15-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily Trad_2291 b7d350921a2b4d223ada40db4fd29321 352 SUPERFAMILY SSF52540 67 338 4.4E-77 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_2291 b7d350921a2b4d223ada40db4fd29321 352 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 262 327 2.1E-16 T 15-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Trad_2291 b7d350921a2b4d223ada40db4fd29321 352 Pfam PF00005 ABC transporter 60 210 6.7E-32 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Trad_2291 b7d350921a2b4d223ada40db4fd29321 352 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 260 346 1.3E-26 T 15-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Trad_2291 b7d350921a2b4d223ada40db4fd29321 352 ProSitePatterns PS00211 ABC transporters family signature. 183 197 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Trad_2291 b7d350921a2b4d223ada40db4fd29321 352 Gene3D G3DSA:3.40.50.300 30 349 2.1E-103 T 15-10-2018 Trad_2291 b7d350921a2b4d223ada40db4fd29321 352 SMART SM00382 68 260 3.6E-18 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_0443 b3bd0aeb5ca38c818a82bbfd0af3260b 147 SUPERFAMILY SSF55486 11 141 7.57E-35 T 15-10-2018 Trad_0443 b3bd0aeb5ca38c818a82bbfd0af3260b 147 Pfam PF02130 Uncharacterized protein family UPF0054 18 135 2.1E-33 T 15-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 Trad_0443 b3bd0aeb5ca38c818a82bbfd0af3260b 147 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 110 120 - T 15-10-2018 IPR020549 Endoribonuclease YbeY, conserved site Trad_0443 b3bd0aeb5ca38c818a82bbfd0af3260b 147 Gene3D G3DSA:3.40.390.30 3 143 9.0E-38 T 15-10-2018 IPR023091 Metalloprotease catalytic domain superfamily, predicted GO:0004222 Trad_0443 b3bd0aeb5ca38c818a82bbfd0af3260b 147 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 1 146 20.228 T 15-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 Trad_0443 b3bd0aeb5ca38c818a82bbfd0af3260b 147 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 33 135 7.7E-30 T 15-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 Trad_1602 a2cf0e594ef148da1a30495e13e3f8dd 459 Pfam PF01225 Mur ligase family, catalytic domain 28 73 1.6E-5 T 15-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 Trad_1602 a2cf0e594ef148da1a30495e13e3f8dd 459 SUPERFAMILY SSF63418 26 96 2.62E-12 T 15-10-2018 IPR035911 MurE/MurF, N-terminal Trad_1602 a2cf0e594ef148da1a30495e13e3f8dd 459 Gene3D G3DSA:3.40.1190.10 85 310 2.5E-40 T 15-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Trad_1602 a2cf0e594ef148da1a30495e13e3f8dd 459 Gene3D G3DSA:3.90.190.20 313 443 3.4E-31 T 15-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Trad_1602 a2cf0e594ef148da1a30495e13e3f8dd 459 Gene3D G3DSA:3.40.1390.10 7 84 3.1E-9 T 15-10-2018 Trad_1602 a2cf0e594ef148da1a30495e13e3f8dd 459 Pfam PF08245 Mur ligase middle domain 104 293 1.1E-18 T 15-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Trad_1602 a2cf0e594ef148da1a30495e13e3f8dd 459 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 33 439 3.7E-87 T 15-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Trad_1602 a2cf0e594ef148da1a30495e13e3f8dd 459 SUPERFAMILY SSF53623 100 308 3.14E-31 T 15-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Trad_1602 a2cf0e594ef148da1a30495e13e3f8dd 459 Pfam PF02875 Mur ligase family, glutamate ligase domain 314 387 1.3E-10 T 15-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Trad_1602 a2cf0e594ef148da1a30495e13e3f8dd 459 SUPERFAMILY SSF53244 314 439 6.23E-29 T 15-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Trad_1922 403c45ae6dba7cb6d66b60151611d081 917 Gene3D G3DSA:3.30.930.10 22 274 3.2E-96 T 15-10-2018 Trad_1922 403c45ae6dba7cb6d66b60151611d081 917 Gene3D G3DSA:3.30.54.20 658 718 2.9E-48 T 15-10-2018 Trad_1922 403c45ae6dba7cb6d66b60151611d081 917 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 27 892 1.2E-249 T 15-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 Trad_1922 403c45ae6dba7cb6d66b60151611d081 917 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 687 737 4.0E-13 T 15-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 Trad_1922 403c45ae6dba7cb6d66b60151611d081 917 Pfam PF02272 DHHA1 domain 773 906 1.8E-13 T 15-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 Trad_1922 403c45ae6dba7cb6d66b60151611d081 917 SUPERFAMILY SSF55681 25 277 8.45E-86 T 15-10-2018 Trad_1922 403c45ae6dba7cb6d66b60151611d081 917 Gene3D G3DSA:2.40.30.130 492 587 3.4E-10 T 15-10-2018 Trad_1922 403c45ae6dba7cb6d66b60151611d081 917 Gene3D G3DSA:3.30.980.10 596 738 2.9E-48 T 15-10-2018 Trad_1922 403c45ae6dba7cb6d66b60151611d081 917 Pfam PF01411 tRNA synthetases class II (A) 27 590 4.5E-190 T 15-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 Trad_1922 403c45ae6dba7cb6d66b60151611d081 917 PRINTS PR00980 Alanyl-tRNA synthetase signature 258 271 3.1E-25 T 15-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 Trad_1922 403c45ae6dba7cb6d66b60151611d081 917 PRINTS PR00980 Alanyl-tRNA synthetase signature 330 343 3.1E-25 T 15-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 Trad_1922 403c45ae6dba7cb6d66b60151611d081 917 PRINTS PR00980 Alanyl-tRNA synthetase signature 100 111 3.1E-25 T 15-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 Trad_1922 403c45ae6dba7cb6d66b60151611d081 917 PRINTS PR00980 Alanyl-tRNA synthetase signature 306 322 3.1E-25 T 15-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 Trad_1922 403c45ae6dba7cb6d66b60151611d081 917 PRINTS PR00980 Alanyl-tRNA synthetase signature 232 243 3.1E-25 T 15-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 Trad_1922 403c45ae6dba7cb6d66b60151611d081 917 SMART SM00863 687 737 3.9E-15 T 15-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 Trad_1922 403c45ae6dba7cb6d66b60151611d081 917 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 914 157.733 T 15-10-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 Trad_1922 403c45ae6dba7cb6d66b60151611d081 917 SUPERFAMILY SSF50447 483 587 5.71E-18 T 15-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Trad_1922 403c45ae6dba7cb6d66b60151611d081 917 Gene3D G3DSA:3.10.310.40 806 912 1.7E-18 T 15-10-2018 Trad_1922 403c45ae6dba7cb6d66b60151611d081 917 SUPERFAMILY SSF101353 279 466 3.27E-54 T 15-10-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 Trad_1922 403c45ae6dba7cb6d66b60151611d081 917 SUPERFAMILY SSF55186 591 748 2.88E-43 T 15-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 Trad_1804 4b8a2c38c0528bf0c475cccbd7be8fa5 118 Pfam PF00072 Response regulator receiver domain 4 79 2.3E-5 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Trad_1804 4b8a2c38c0528bf0c475cccbd7be8fa5 118 Gene3D G3DSA:3.40.50.2300 1 108 9.5E-12 T 15-10-2018 Trad_1804 4b8a2c38c0528bf0c475cccbd7be8fa5 118 SUPERFAMILY SSF52172 3 109 4.7E-13 T 15-10-2018 IPR011006 CheY-like superfamily Trad_0349 9fb6ccee3476e9ebd3a0dc9eb2a94efd 397 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 182 224 2.2E-8 T 15-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 Trad_0349 9fb6ccee3476e9ebd3a0dc9eb2a94efd 397 Gene3D G3DSA:3.30.980.10 87 241 5.5E-33 T 15-10-2018 Trad_0349 9fb6ccee3476e9ebd3a0dc9eb2a94efd 397 SUPERFAMILY SSF50447 3 83 2.58E-15 T 15-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Trad_0349 9fb6ccee3476e9ebd3a0dc9eb2a94efd 397 SMART SM00863 182 225 6.5E-10 T 15-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 Trad_0349 9fb6ccee3476e9ebd3a0dc9eb2a94efd 397 Gene3D G3DSA:2.40.30.130 1 85 8.3E-21 T 15-10-2018 Trad_0349 9fb6ccee3476e9ebd3a0dc9eb2a94efd 397 Pfam PF01411 tRNA synthetases class II (A) 29 89 3.6E-6 T 15-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 Trad_0349 9fb6ccee3476e9ebd3a0dc9eb2a94efd 397 SUPERFAMILY SSF55186 90 232 6.54E-27 T 15-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 Trad_0349 9fb6ccee3476e9ebd3a0dc9eb2a94efd 397 Gene3D G3DSA:3.10.310.40 295 393 2.1E-6 T 15-10-2018 Trad_0349 9fb6ccee3476e9ebd3a0dc9eb2a94efd 397 Pfam PF02272 DHHA1 domain 263 391 1.4E-8 T 15-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 Trad_0077 7a46ee82545b224014d8ecaea33be09d 1236 Gene3D G3DSA:3.20.70.20 5 144 7.1E-12 T 15-10-2018 Trad_0077 7a46ee82545b224014d8ecaea33be09d 1236 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 19 85 5.7E-9 T 15-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Trad_0077 7a46ee82545b224014d8ecaea33be09d 1236 TIGRFAM TIGR01443 intein_Cterm: intein C-terminal splicing region 731 753 4.5E-6 T 15-10-2018 IPR030934 Intein C-terminal splicing region Trad_0077 7a46ee82545b224014d8ecaea33be09d 1236 Pfam PF14528 LAGLIDADG-like domain 598 691 1.5E-18 T 15-10-2018 IPR004860 Homing endonuclease, LAGLIDADG GO:0004519 Trad_0077 7a46ee82545b224014d8ecaea33be09d 1236 Gene3D G3DSA:3.20.70.20 732 1066 5.7E-104 T 15-10-2018 Trad_0077 7a46ee82545b224014d8ecaea33be09d 1236 Gene3D G3DSA:2.170.16.10 391 504 6.3E-11 T 15-10-2018 Trad_0077 7a46ee82545b224014d8ecaea33be09d 1236 PRINTS PR00379 Intein signature 729 746 2.1E-15 T 15-10-2018 IPR006142 Intein GO:0016539 Trad_0077 7a46ee82545b224014d8ecaea33be09d 1236 PRINTS PR00379 Intein signature 747 756 2.1E-15 T 15-10-2018 IPR006142 Intein GO:0016539 Trad_0077 7a46ee82545b224014d8ecaea33be09d 1236 PRINTS PR00379 Intein signature 502 514 2.1E-15 T 15-10-2018 IPR006142 Intein GO:0016539 Trad_0077 7a46ee82545b224014d8ecaea33be09d 1236 PRINTS PR00379 Intein signature 598 610 2.1E-15 T 15-10-2018 IPR006142 Intein GO:0016539 Trad_0077 7a46ee82545b224014d8ecaea33be09d 1236 PRINTS PR00379 Intein signature 445 458 2.1E-15 T 15-10-2018 IPR006142 Intein GO:0016539 Trad_0077 7a46ee82545b224014d8ecaea33be09d 1236 PRINTS PR00379 Intein signature 629 644 2.1E-15 T 15-10-2018 IPR006142 Intein GO:0016539 Trad_0077 7a46ee82545b224014d8ecaea33be09d 1236 Pfam PF02867 Ribonucleotide reductase, barrel domain 348 884 9.2E-47 T 15-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Trad_0077 7a46ee82545b224014d8ecaea33be09d 1236 Gene3D G3DSA:3.20.70.20 179 390 1.2E-41 T 15-10-2018 Trad_0077 7a46ee82545b224014d8ecaea33be09d 1236 Gene3D G3DSA:3.10.28.10 505 660 8.9E-18 T 15-10-2018 IPR027434 Homing endonuclease Trad_0077 7a46ee82545b224014d8ecaea33be09d 1236 Pfam PF02867 Ribonucleotide reductase, barrel domain 264 342 3.4E-18 T 15-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Trad_0077 7a46ee82545b224014d8ecaea33be09d 1236 TIGRFAM TIGR01445 intein_Nterm: intein N-terminal splicing region 389 456 1.3E-6 T 15-10-2018 IPR006141 Intein N-terminal splicing region GO:0016539 Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 Trad_0077 7a46ee82545b224014d8ecaea33be09d 1236 SUPERFAMILY SSF51294 388 752 7.65E-40 T 15-10-2018 IPR036844 Hint domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 Trad_0077 7a46ee82545b224014d8ecaea33be09d 1236 SUPERFAMILY SSF55608 586 702 8.5E-10 T 15-10-2018 IPR027434 Homing endonuclease Trad_0077 7a46ee82545b224014d8ecaea33be09d 1236 SMART SM00306 387 487 8.6E-8 T 15-10-2018 IPR003587 Hint domain N-terminal Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 Trad_0077 7a46ee82545b224014d8ecaea33be09d 1236 SUPERFAMILY SSF51998 193 1062 2.98E-106 T 15-10-2018 Trad_0077 7a46ee82545b224014d8ecaea33be09d 1236 Pfam PF02867 Ribonucleotide reductase, barrel domain 885 1050 3.7E-30 T 15-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Trad_0077 7a46ee82545b224014d8ecaea33be09d 1236 Pfam PF14890 Intein splicing domain 429 752 1.9E-12 T 15-10-2018 Trad_0077 7a46ee82545b224014d8ecaea33be09d 1236 SMART SM00305 713 758 2.1E-6 T 15-10-2018 IPR003586 Hint domain C-terminal Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 Trad_0673 fa11a640ed9cdf950407e1d9d6415e4f 210 PIRSF PIRSF000709 2 163 1.9E-12 T 15-10-2018 Trad_0673 fa11a640ed9cdf950407e1d9d6415e4f 210 SMART SM00855 3 152 3.7E-24 T 15-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Trad_0673 fa11a640ed9cdf950407e1d9d6415e4f 210 Gene3D G3DSA:3.40.50.1240 1 202 2.8E-57 T 15-10-2018 IPR029033 Histidine phosphatase superfamily Trad_0673 fa11a640ed9cdf950407e1d9d6415e4f 210 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 192 1.2E-55 T 15-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Trad_0673 fa11a640ed9cdf950407e1d9d6415e4f 210 SUPERFAMILY SSF53254 1 197 1.2E-58 T 15-10-2018 IPR029033 Histidine phosphatase superfamily Trad_0673 fa11a640ed9cdf950407e1d9d6415e4f 210 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 6 15 - T 15-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 Trad_2150 39a3c0220d6dca4031deb54193b87d32 556 SMART SM00322 244 311 4.2E-6 T 15-10-2018 IPR004087 K Homology domain GO:0003676 Trad_2150 39a3c0220d6dca4031deb54193b87d32 556 SUPERFAMILY SSF109604 350 506 2.92E-29 T 15-10-2018 Trad_2150 39a3c0220d6dca4031deb54193b87d32 556 Pfam PF00013 KH domain 249 298 2.3E-6 T 15-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 Trad_2150 39a3c0220d6dca4031deb54193b87d32 556 Gene3D G3DSA:1.10.3210.10 354 507 1.4E-23 T 15-10-2018 Trad_2150 39a3c0220d6dca4031deb54193b87d32 556 Pfam PF12072 Domain of unknown function (DUF3552) 98 240 6.2E-18 T 15-10-2018 IPR022711 Ribonuclease Y, N-terminal Trad_2150 39a3c0220d6dca4031deb54193b87d32 556 TIGRFAM TIGR03319 RNase_Y: ribonuclease Y 100 556 5.8E-190 T 15-10-2018 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 Trad_2150 39a3c0220d6dca4031deb54193b87d32 556 Pfam PF01966 HD domain 373 464 2.9E-18 T 15-10-2018 IPR006674 HD domain Trad_2150 39a3c0220d6dca4031deb54193b87d32 556 Hamap MF_00335 Ribonuclease Y [rny]. 5 556 24.054 T 15-10-2018 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 Trad_2150 39a3c0220d6dca4031deb54193b87d32 556 SMART SM00471 368 474 7.3E-13 T 15-10-2018 IPR003607 HD/PDEase domain Trad_2150 39a3c0220d6dca4031deb54193b87d32 556 SUPERFAMILY SSF54791 249 339 3.16E-14 T 15-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 Trad_2150 39a3c0220d6dca4031deb54193b87d32 556 TIGRFAM TIGR00277 HDIG: HDIG domain 368 444 1.6E-24 T 15-10-2018 IPR006675 HDIG domain Trad_2150 39a3c0220d6dca4031deb54193b87d32 556 Gene3D G3DSA:3.30.1370.10 247 345 5.4E-7 T 15-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 Trad_0686 1d35ab4fe0f72474d112f25ab8b84d25 257 Gene3D G3DSA:3.30.60.100 151 189 1.5E-54 T 15-10-2018 Trad_0686 1d35ab4fe0f72474d112f25ab8b84d25 257 SUPERFAMILY SSF50249 7 80 8.91E-8 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold Trad_0686 1d35ab4fe0f72474d112f25ab8b84d25 257 TIGRFAM TIGR00613 reco: DNA repair protein RecO 10 201 8.7E-16 T 15-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 Trad_0686 1d35ab4fe0f72474d112f25ab8b84d25 257 Pfam PF02565 Recombination protein O C terminal 89 237 1.0E-17 T 15-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 Trad_0686 1d35ab4fe0f72474d112f25ab8b84d25 257 Pfam PF11967 Recombination protein O N terminal 9 80 5.5E-6 T 15-10-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal Trad_0686 1d35ab4fe0f72474d112f25ab8b84d25 257 Hamap MF_00201 DNA repair protein RecO [recO]. 5 244 16.32 T 15-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 Trad_0686 1d35ab4fe0f72474d112f25ab8b84d25 257 Gene3D G3DSA:2.40.50.140 3 88 2.5E-24 T 15-10-2018 Trad_0686 1d35ab4fe0f72474d112f25ab8b84d25 257 SUPERFAMILY SSF57863 88 233 5.23E-24 T 15-10-2018 IPR037278 ARFGAP/RecO-like zinc finger Trad_0686 1d35ab4fe0f72474d112f25ab8b84d25 257 Gene3D G3DSA:1.20.1440.120 90 237 1.5E-54 T 15-10-2018 Trad_0547 c704fba782d6005db3e59b9b707459d4 131 Pfam PF01797 Transposase IS200 like 13 128 8.1E-38 T 15-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 Trad_0547 c704fba782d6005db3e59b9b707459d4 131 SMART SM01321 12 128 4.3E-41 T 15-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 Trad_0547 c704fba782d6005db3e59b9b707459d4 131 Gene3D G3DSA:3.30.70.1290 4 131 7.3E-44 T 15-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 Trad_0547 c704fba782d6005db3e59b9b707459d4 131 SUPERFAMILY SSF143422 5 129 5.1E-42 T 15-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 Trad_0633 c704fba782d6005db3e59b9b707459d4 131 Pfam PF01797 Transposase IS200 like 13 128 8.1E-38 T 15-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 Trad_0633 c704fba782d6005db3e59b9b707459d4 131 SMART SM01321 12 128 4.3E-41 T 15-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 Trad_0633 c704fba782d6005db3e59b9b707459d4 131 Gene3D G3DSA:3.30.70.1290 4 131 7.3E-44 T 15-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 Trad_0633 c704fba782d6005db3e59b9b707459d4 131 SUPERFAMILY SSF143422 5 129 5.1E-42 T 15-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 Trad_0611 c704fba782d6005db3e59b9b707459d4 131 Pfam PF01797 Transposase IS200 like 13 128 8.1E-38 T 15-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 Trad_0611 c704fba782d6005db3e59b9b707459d4 131 SMART SM01321 12 128 4.3E-41 T 15-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 Trad_0611 c704fba782d6005db3e59b9b707459d4 131 Gene3D G3DSA:3.30.70.1290 4 131 7.3E-44 T 15-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 Trad_0611 c704fba782d6005db3e59b9b707459d4 131 SUPERFAMILY SSF143422 5 129 5.1E-42 T 15-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 Trad_1069 442c17f8e34d2f6a42a7f0df890a4e30 388 SUPERFAMILY SSF143856 99 211 1.7E-37 T 15-10-2018 IPR024052 Phosphopentomutase DeoB cap domain superfamily GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 Trad_1069 442c17f8e34d2f6a42a7f0df890a4e30 388 PIRSF PIRSF001491 1 385 2.0E-135 T 15-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 Trad_1069 442c17f8e34d2f6a42a7f0df890a4e30 388 Gene3D G3DSA:3.30.70.1250 97 214 3.4E-144 T 15-10-2018 IPR024052 Phosphopentomutase DeoB cap domain superfamily GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 Trad_1069 442c17f8e34d2f6a42a7f0df890a4e30 388 Pfam PF01676 Metalloenzyme superfamily 2 371 6.9E-29 T 15-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 Trad_1069 442c17f8e34d2f6a42a7f0df890a4e30 388 SUPERFAMILY SSF53649 2 381 3.09E-71 T 15-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 Trad_1069 442c17f8e34d2f6a42a7f0df890a4e30 388 Hamap MF_00740 Phosphopentomutase [deoB]. 1 381 45.036 T 15-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 Trad_1069 442c17f8e34d2f6a42a7f0df890a4e30 388 TIGRFAM TIGR01696 deoB: phosphopentomutase 3 371 4.2E-132 T 15-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 Trad_1069 442c17f8e34d2f6a42a7f0df890a4e30 388 Gene3D G3DSA:3.40.720.10 3 380 3.4E-144 T 15-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 Trad_0352 dd5d2320fa0235b00ed89ac69ab72c22 167 Gene3D G3DSA:1.20.1260.10 1 167 1.8E-48 T 15-10-2018 IPR012347 Ferritin-like Trad_0352 dd5d2320fa0235b00ed89ac69ab72c22 167 SUPERFAMILY SSF47240 11 165 1.33E-43 T 15-10-2018 IPR009078 Ferritin-like superfamily Trad_0352 dd5d2320fa0235b00ed89ac69ab72c22 167 Pfam PF00210 Ferritin-like domain 25 165 1.3E-25 T 15-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 Trad_0352 dd5d2320fa0235b00ed89ac69ab72c22 167 PIRSF PIRSF005900 3 167 4.2E-43 T 15-10-2018 IPR002177 DNA-binding protein Dps Trad_0352 dd5d2320fa0235b00ed89ac69ab72c22 167 ProSitePatterns PS00818 Dps protein family signature 1. 46 62 - T 15-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 Trad_0352 dd5d2320fa0235b00ed89ac69ab72c22 167 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 70 86 3.6E-10 T 15-10-2018 IPR002177 DNA-binding protein Dps Trad_0352 dd5d2320fa0235b00ed89ac69ab72c22 167 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 46 62 3.6E-10 T 15-10-2018 IPR002177 DNA-binding protein Dps Trad_0352 dd5d2320fa0235b00ed89ac69ab72c22 167 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 142 160 3.6E-10 T 15-10-2018 IPR002177 DNA-binding protein Dps Trad_2723 56d106cda59595f8e2a9871cea5dbc8a 333 Gene3D G3DSA:3.40.50.300 24 274 7.9E-68 T 15-10-2018 Trad_2723 56d106cda59595f8e2a9871cea5dbc8a 333 Pfam PF00685 Sulfotransferase domain 30 226 1.2E-14 T 15-10-2018 IPR000863 Sulfotransferase domain GO:0008146 Trad_2723 56d106cda59595f8e2a9871cea5dbc8a 333 SUPERFAMILY SSF52540 24 322 4.65E-61 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_1215 6a4679f7a5a653b23db87cf9cf81bd46 181 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 10 172 6.8E-57 T 15-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 Trad_1215 6a4679f7a5a653b23db87cf9cf81bd46 181 Gene3D G3DSA:3.30.110.10 79 173 1.2E-34 T 15-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 Trad_1215 6a4679f7a5a653b23db87cf9cf81bd46 181 SUPERFAMILY SSF55200 87 172 9.03E-31 T 15-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 Trad_1215 6a4679f7a5a653b23db87cf9cf81bd46 181 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 87 170 1.9E-34 T 15-10-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 Trad_1215 6a4679f7a5a653b23db87cf9cf81bd46 181 ProSitePatterns PS00938 Initiation factor 3 signature. 61 74 - T 15-10-2018 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 Trad_1215 6a4679f7a5a653b23db87cf9cf81bd46 181 Gene3D G3DSA:3.10.20.80 4 78 1.4E-29 T 15-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 Trad_1215 6a4679f7a5a653b23db87cf9cf81bd46 181 SUPERFAMILY SSF54364 8 81 2.88E-26 T 15-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 Trad_1215 6a4679f7a5a653b23db87cf9cf81bd46 181 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 4 173 28.129 T 15-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 Trad_1215 6a4679f7a5a653b23db87cf9cf81bd46 181 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 10 79 3.8E-30 T 15-10-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 Trad_0780 f29192b25c469264a319b59311433663 922 Gene3D G3DSA:1.20.1110.10 84 909 1.9E-285 T 15-10-2018 Trad_0780 f29192b25c469264a319b59311433663 922 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 356 362 - T 15-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 Trad_0780 f29192b25c469264a319b59311433663 922 Pfam PF00689 Cation transporting ATPase, C-terminus 739 910 1.5E-38 T 15-10-2018 IPR006068 Cation-transporting P-type ATPase, C-terminal Reactome: R-HSA-936837 Trad_0780 f29192b25c469264a319b59311433663 922 SUPERFAMILY SSF56784 352 758 1.02E-62 T 15-10-2018 IPR036412 HAD-like superfamily Trad_0780 f29192b25c469264a319b59311433663 922 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 653 672 9.4E-40 T 15-10-2018 Trad_0780 f29192b25c469264a319b59311433663 922 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 354 368 9.4E-40 T 15-10-2018 Trad_0780 f29192b25c469264a319b59311433663 922 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 552 563 9.4E-40 T 15-10-2018 Trad_0780 f29192b25c469264a319b59311433663 922 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 677 689 9.4E-40 T 15-10-2018 Trad_0780 f29192b25c469264a319b59311433663 922 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 574 584 9.4E-40 T 15-10-2018 Trad_0780 f29192b25c469264a319b59311433663 922 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 191 205 9.4E-40 T 15-10-2018 Trad_0780 f29192b25c469264a319b59311433663 922 SMART SM00831 33 106 1.5E-38 T 15-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 Trad_0780 f29192b25c469264a319b59311433663 922 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 625 641 1.8E-19 T 15-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Trad_0780 f29192b25c469264a319b59311433663 922 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 685 710 1.8E-19 T 15-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Trad_0780 f29192b25c469264a319b59311433663 922 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 511 529 1.8E-19 T 15-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Trad_0780 f29192b25c469264a319b59311433663 922 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 653 669 1.8E-19 T 15-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Trad_0780 f29192b25c469264a319b59311433663 922 Pfam PF00702 haloacid dehalogenase-like hydrolase 351 667 1.9E-24 T 15-10-2018 Trad_0780 f29192b25c469264a319b59311433663 922 SUPERFAMILY SSF81653 144 253 7.45E-30 T 15-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 Trad_0780 f29192b25c469264a319b59311433663 922 Pfam PF00690 Cation transporter/ATPase, N-terminus 34 100 9.0E-20 T 15-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 Trad_0780 f29192b25c469264a319b59311433663 922 Gene3D G3DSA:3.40.50.1000 351 698 1.9E-285 T 15-10-2018 IPR023214 HAD superfamily Trad_0780 f29192b25c469264a319b59311433663 922 SUPERFAMILY SSF81660 361 556 4.8E-48 T 15-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 Trad_0780 f29192b25c469264a319b59311433663 922 Pfam PF00122 E1-E2 ATPase 142 334 9.2E-52 T 15-10-2018 Trad_0780 f29192b25c469264a319b59311433663 922 Gene3D G3DSA:3.40.1110.10 364 559 1.9E-285 T 15-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 Trad_0780 f29192b25c469264a319b59311433663 922 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 622 734 1.0E-33 T 15-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Trad_0780 f29192b25c469264a319b59311433663 922 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 244 373 1.3E-25 T 15-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Trad_0780 f29192b25c469264a319b59311433663 922 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 454 598 3.2E-19 T 15-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Trad_0780 f29192b25c469264a319b59311433663 922 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 112 211 2.7E-18 T 15-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Trad_0780 f29192b25c469264a319b59311433663 922 SUPERFAMILY SSF81665 34 915 9.42E-120 T 15-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 Trad_0780 f29192b25c469264a319b59311433663 922 Gene3D G3DSA:2.70.150.10 50 256 1.9E-285 T 15-10-2018 Trad_2353 9c46568b790e6b91c2adcddfffced411 1719 Gene3D G3DSA:2.170.16.10 862 975 1.1E-24 T 15-10-2018 Trad_2353 9c46568b790e6b91c2adcddfffced411 1719 SUPERFAMILY SSF51294 863 1294 7.65E-41 T 15-10-2018 IPR036844 Hint domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 Trad_2353 9c46568b790e6b91c2adcddfffced411 1719 Gene3D G3DSA:3.10.28.10 976 1147 6.7E-21 T 15-10-2018 IPR027434 Homing endonuclease Trad_2353 9c46568b790e6b91c2adcddfffced411 1719 Pfam PF14890 Intein splicing domain 875 1294 1.1E-29 T 15-10-2018 Trad_2353 9c46568b790e6b91c2adcddfffced411 1719 TIGRFAM TIGR01443 intein_Cterm: intein C-terminal splicing region 1274 1295 6.0E-6 T 15-10-2018 IPR030934 Intein C-terminal splicing region Trad_2353 9c46568b790e6b91c2adcddfffced411 1719 PRINTS PR00379 Intein signature 926 939 5.3E-19 T 15-10-2018 IPR006142 Intein GO:0016539 Trad_2353 9c46568b790e6b91c2adcddfffced411 1719 PRINTS PR00379 Intein signature 973 985 5.3E-19 T 15-10-2018 IPR006142 Intein GO:0016539 Trad_2353 9c46568b790e6b91c2adcddfffced411 1719 PRINTS PR00379 Intein signature 1081 1093 5.3E-19 T 15-10-2018 IPR006142 Intein GO:0016539 Trad_2353 9c46568b790e6b91c2adcddfffced411 1719 PRINTS PR00379 Intein signature 1271 1288 5.3E-19 T 15-10-2018 IPR006142 Intein GO:0016539 Trad_2353 9c46568b790e6b91c2adcddfffced411 1719 PRINTS PR00379 Intein signature 1110 1125 5.3E-19 T 15-10-2018 IPR006142 Intein GO:0016539 Trad_2353 9c46568b790e6b91c2adcddfffced411 1719 PRINTS PR00379 Intein signature 1289 1298 5.3E-19 T 15-10-2018 IPR006142 Intein GO:0016539 Trad_2353 9c46568b790e6b91c2adcddfffced411 1719 SMART SM00305 1255 1300 1.1E-8 T 15-10-2018 IPR003586 Hint domain C-terminal Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 Trad_2353 9c46568b790e6b91c2adcddfffced411 1719 SUPERFAMILY SSF55608 1064 1165 7.94E-11 T 15-10-2018 IPR027434 Homing endonuclease Trad_2353 9c46568b790e6b91c2adcddfffced411 1719 TIGRFAM TIGR01445 intein_Nterm: intein N-terminal splicing region 864 939 1.5E-6 T 15-10-2018 IPR006141 Intein N-terminal splicing region GO:0016539 Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 Trad_2353 9c46568b790e6b91c2adcddfffced411 1719 Gene3D G3DSA:1.10.10.1600 544 620 1.0E-21 T 15-10-2018 Trad_2353 9c46568b790e6b91c2adcddfffced411 1719 SMART SM00306 862 959 4.8E-13 T 15-10-2018 IPR003587 Hint domain N-terminal Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 Trad_2353 9c46568b790e6b91c2adcddfffced411 1719 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 431 839 4.4E-161 T 15-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Trad_2353 9c46568b790e6b91c2adcddfffced411 1719 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 419 863 1.3E-192 T 15-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Trad_2353 9c46568b790e6b91c2adcddfffced411 1719 Pfam PF14579 Helix-hairpin-helix motif 1344 1429 1.1E-26 T 15-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Trad_2353 9c46568b790e6b91c2adcddfffced411 1719 SUPERFAMILY SSF89550 26 297 1.1E-23 T 15-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 Trad_2353 9c46568b790e6b91c2adcddfffced411 1719 Gene3D G3DSA:3.20.20.140 22 320 7.3E-96 T 15-10-2018 Trad_2353 9c46568b790e6b91c2adcddfffced411 1719 Pfam PF14528 LAGLIDADG-like domain 1082 1158 3.7E-11 T 15-10-2018 IPR004860 Homing endonuclease, LAGLIDADG GO:0004519 Trad_2353 9c46568b790e6b91c2adcddfffced411 1719 Gene3D G3DSA:2.170.16.10 1195 1294 3.0E-14 T 15-10-2018 Trad_2353 9c46568b790e6b91c2adcddfffced411 1719 Pfam PF02811 PHP domain 29 207 1.7E-45 T 15-10-2018 IPR004013 PHP domain GO:0003824 Trad_2353 9c46568b790e6b91c2adcddfffced411 1719 Pfam PF01336 OB-fold nucleic acid binding domain 1540 1605 1.8E-6 T 15-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 Trad_2353 9c46568b790e6b91c2adcddfffced411 1719 SMART SM00481 28 97 8.5E-24 T 15-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal Trad_2891 445dea2613147cd4e46653d2b88aad07 437 Pfam PF01547 Bacterial extracellular solute-binding protein 35 327 4.9E-46 T 15-10-2018 IPR006059 Bacterial extracellular solute-binding protein Trad_2891 445dea2613147cd4e46653d2b88aad07 437 SUPERFAMILY SSF53850 18 432 2.02E-73 T 15-10-2018 Trad_2891 445dea2613147cd4e46653d2b88aad07 437 Gene3D G3DSA:3.40.190.10 142 424 2.7E-134 T 15-10-2018 Trad_2891 445dea2613147cd4e46653d2b88aad07 437 Gene3D G3DSA:3.40.190.10 39 395 2.7E-134 T 15-10-2018 Trad_0624 3dc64b50885b861c6f2281501fdd6903 609 Pfam PF01807 CHC2 zinc finger 5 95 7.0E-30 T 15-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 Trad_0624 3dc64b50885b861c6f2281501fdd6903 609 Gene3D G3DSA:3.90.580.10 1 97 5.0E-33 T 15-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 Trad_0624 3dc64b50885b861c6f2281501fdd6903 609 TIGRFAM TIGR01391 dnaG: DNA primase 3 384 3.2E-115 T 15-10-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 Trad_0624 3dc64b50885b861c6f2281501fdd6903 609 SMART SM00400 33 87 1.1E-28 T 15-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 Trad_0624 3dc64b50885b861c6f2281501fdd6903 609 SUPERFAMILY SSF57783 2 95 4.25E-30 T 15-10-2018 Trad_0624 3dc64b50885b861c6f2281501fdd6903 609 Hamap MF_00974 DNA primase [dnaG]. 1 558 24.744 T 15-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 Trad_0624 3dc64b50885b861c6f2281501fdd6903 609 Gene3D G3DSA:3.40.1360.10 228 350 4.6E-33 T 15-10-2018 Trad_0624 3dc64b50885b861c6f2281501fdd6903 609 SMART SM00493 246 318 1.9E-12 T 15-10-2018 IPR006171 TOPRIM domain Trad_0624 3dc64b50885b861c6f2281501fdd6903 609 SUPERFAMILY SSF56731 107 385 2.35E-89 T 15-10-2018 Trad_0624 3dc64b50885b861c6f2281501fdd6903 609 Pfam PF08275 DNA primase catalytic core, N-terminal domain 125 238 7.8E-41 T 15-10-2018 IPR013264 DNA primase, catalytic core, N-terminal Trad_0624 3dc64b50885b861c6f2281501fdd6903 609 Gene3D G3DSA:3.90.980.10 106 227 3.8E-42 T 15-10-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily Trad_0624 3dc64b50885b861c6f2281501fdd6903 609 Pfam PF13662 Toprim domain 247 311 3.8E-16 T 15-10-2018 IPR006171 TOPRIM domain Trad_0624 3dc64b50885b861c6f2281501fdd6903 609 PIRSF PIRSF002811 1 566 5.4E-135 T 15-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 Trad_0413 83379fb5fcb04d3a2c4665db36bd18e5 191 ProSitePatterns PS00194 Thioredoxin family active site. 83 101 - T 15-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 Trad_0413 83379fb5fcb04d3a2c4665db36bd18e5 191 SUPERFAMILY SSF52833 45 190 1.04E-36 T 15-10-2018 IPR036249 Thioredoxin-like superfamily Trad_0413 83379fb5fcb04d3a2c4665db36bd18e5 191 Pfam PF00578 AhpC/TSA family 50 171 2.5E-18 T 15-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Trad_0413 83379fb5fcb04d3a2c4665db36bd18e5 191 Gene3D G3DSA:3.40.30.10 40 191 1.9E-39 T 15-10-2018 Trad_2251 49c9c0b7aac73d04b881e2ad89f07284 191 Pfam PF01965 DJ-1/PfpI family 9 178 2.6E-53 T 15-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 Trad_2251 49c9c0b7aac73d04b881e2ad89f07284 191 Gene3D G3DSA:3.40.50.880 2 189 9.2E-58 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like Trad_2251 49c9c0b7aac73d04b881e2ad89f07284 191 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 12 178 4.5E-52 T 15-10-2018 IPR006286 Deglycase PfpI Trad_2251 49c9c0b7aac73d04b881e2ad89f07284 191 SUPERFAMILY SSF52317 7 180 8.73E-50 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like Trad_1147 b77cdbd31b1656261ce9d77e70781436 251 TIGRFAM TIGR02158 PA_CoA_Oxy3: phenylacetate-CoA oxygenase, PaaI subunit 16 251 2.4E-84 T 15-10-2018 IPR011882 1,2-phenylacetyl-CoA epoxidase, subunit C GO:0010124 Trad_1147 b77cdbd31b1656261ce9d77e70781436 251 SUPERFAMILY SSF47240 7 243 1.44E-70 T 15-10-2018 IPR009078 Ferritin-like superfamily Trad_1147 b77cdbd31b1656261ce9d77e70781436 251 Gene3D G3DSA:1.20.1260.10 1 251 3.9E-87 T 15-10-2018 IPR012347 Ferritin-like Trad_1147 b77cdbd31b1656261ce9d77e70781436 251 Pfam PF05138 Phenylacetic acid catabolic protein 2 248 1.8E-80 T 15-10-2018 IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C GO:0010124 Trad_1147 b77cdbd31b1656261ce9d77e70781436 251 PIRSF PIRSF037834 1 251 1.3E-92 T 15-10-2018 IPR011882 1,2-phenylacetyl-CoA epoxidase, subunit C GO:0010124 Trad_1194 5365ceb74138d72e378d89b0f3ad12db 142 Pfam PF01797 Transposase IS200 like 10 128 2.5E-42 T 15-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 Trad_1194 5365ceb74138d72e378d89b0f3ad12db 142 Gene3D G3DSA:3.30.70.1290 1 136 1.4E-49 T 15-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 Trad_1194 5365ceb74138d72e378d89b0f3ad12db 142 SUPERFAMILY SSF143422 1 129 5.36E-48 T 15-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 Trad_1194 5365ceb74138d72e378d89b0f3ad12db 142 SMART SM01321 10 129 4.4E-47 T 15-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 Trad_0542 5365ceb74138d72e378d89b0f3ad12db 142 Pfam PF01797 Transposase IS200 like 10 128 2.5E-42 T 15-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 Trad_0542 5365ceb74138d72e378d89b0f3ad12db 142 Gene3D G3DSA:3.30.70.1290 1 136 1.4E-49 T 15-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 Trad_0542 5365ceb74138d72e378d89b0f3ad12db 142 SUPERFAMILY SSF143422 1 129 5.36E-48 T 15-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 Trad_0542 5365ceb74138d72e378d89b0f3ad12db 142 SMART SM01321 10 129 4.4E-47 T 15-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 Trad_1424 5365ceb74138d72e378d89b0f3ad12db 142 Pfam PF01797 Transposase IS200 like 10 128 2.5E-42 T 15-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 Trad_1424 5365ceb74138d72e378d89b0f3ad12db 142 Gene3D G3DSA:3.30.70.1290 1 136 1.4E-49 T 15-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 Trad_1424 5365ceb74138d72e378d89b0f3ad12db 142 SUPERFAMILY SSF143422 1 129 5.36E-48 T 15-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 Trad_1424 5365ceb74138d72e378d89b0f3ad12db 142 SMART SM01321 10 129 4.4E-47 T 15-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 Trad_2412 5365ceb74138d72e378d89b0f3ad12db 142 Pfam PF01797 Transposase IS200 like 10 128 2.5E-42 T 15-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 Trad_2412 5365ceb74138d72e378d89b0f3ad12db 142 Gene3D G3DSA:3.30.70.1290 1 136 1.4E-49 T 15-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 Trad_2412 5365ceb74138d72e378d89b0f3ad12db 142 SUPERFAMILY SSF143422 1 129 5.36E-48 T 15-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 Trad_2412 5365ceb74138d72e378d89b0f3ad12db 142 SMART SM01321 10 129 4.4E-47 T 15-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 Trad_0937 5365ceb74138d72e378d89b0f3ad12db 142 Pfam PF01797 Transposase IS200 like 10 128 2.5E-42 T 15-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 Trad_0937 5365ceb74138d72e378d89b0f3ad12db 142 Gene3D G3DSA:3.30.70.1290 1 136 1.4E-49 T 15-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 Trad_0937 5365ceb74138d72e378d89b0f3ad12db 142 SUPERFAMILY SSF143422 1 129 5.36E-48 T 15-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 Trad_0937 5365ceb74138d72e378d89b0f3ad12db 142 SMART SM01321 10 129 4.4E-47 T 15-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 Trad_1876 5365ceb74138d72e378d89b0f3ad12db 142 Pfam PF01797 Transposase IS200 like 10 128 2.5E-42 T 15-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 Trad_1876 5365ceb74138d72e378d89b0f3ad12db 142 Gene3D G3DSA:3.30.70.1290 1 136 1.4E-49 T 15-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 Trad_1876 5365ceb74138d72e378d89b0f3ad12db 142 SUPERFAMILY SSF143422 1 129 5.36E-48 T 15-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 Trad_1876 5365ceb74138d72e378d89b0f3ad12db 142 SMART SM01321 10 129 4.4E-47 T 15-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 Trad_2701 5365ceb74138d72e378d89b0f3ad12db 142 Pfam PF01797 Transposase IS200 like 10 128 2.5E-42 T 15-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 Trad_2701 5365ceb74138d72e378d89b0f3ad12db 142 Gene3D G3DSA:3.30.70.1290 1 136 1.4E-49 T 15-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 Trad_2701 5365ceb74138d72e378d89b0f3ad12db 142 SUPERFAMILY SSF143422 1 129 5.36E-48 T 15-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 Trad_2701 5365ceb74138d72e378d89b0f3ad12db 142 SMART SM01321 10 129 4.4E-47 T 15-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 Trad_1080 85de584ddf25a49c3cc8a5e508d12fb2 127 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 47 76 - T 15-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 Trad_1080 85de584ddf25a49c3cc8a5e508d12fb2 127 Gene3D G3DSA:2.40.50.100 1 127 9.7E-50 T 15-10-2018 Trad_1080 85de584ddf25a49c3cc8a5e508d12fb2 127 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 4 125 41.127 T 15-10-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 Trad_1080 85de584ddf25a49c3cc8a5e508d12fb2 127 Pfam PF01597 Glycine cleavage H-protein 7 125 1.0E-44 T 15-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate Trad_1080 85de584ddf25a49c3cc8a5e508d12fb2 127 SUPERFAMILY SSF51230 3 125 2.32E-46 T 15-10-2018 IPR011053 Single hybrid motif Trad_1080 85de584ddf25a49c3cc8a5e508d12fb2 127 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 2 126 2.8E-52 T 15-10-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 Trad_0907 cbebf77e72f44733015ebca6944ffd1f 479 Gene3D G3DSA:3.90.550.10 4 434 1.4E-141 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Trad_0907 cbebf77e72f44733015ebca6944ffd1f 479 Pfam PF01704 UTP--glucose-1-phosphate uridylyltransferase 104 410 4.6E-33 T 15-10-2018 IPR002618 UDPGP family GO:0070569 Trad_0907 cbebf77e72f44733015ebca6944ffd1f 479 SUPERFAMILY SSF53448 11 464 1.9E-123 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Trad_1102 21d7b4bc6fca35766504e4f3e962fe78 493 SUPERFAMILY SSF51905 14 481 1.78E-31 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Trad_1102 21d7b4bc6fca35766504e4f3e962fe78 493 Gene3D G3DSA:3.90.660.50 218 407 3.2E-6 T 15-10-2018 Trad_1102 21d7b4bc6fca35766504e4f3e962fe78 493 Gene3D G3DSA:3.50.50.60 14 96 3.4E-13 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Trad_1102 21d7b4bc6fca35766504e4f3e962fe78 493 Pfam PF13450 NAD(P)-binding Rossmann-like domain 19 75 1.4E-10 T 15-10-2018 Trad_1102 21d7b4bc6fca35766504e4f3e962fe78 493 Gene3D G3DSA:3.50.50.60 223 293 3.2E-6 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Trad_1686 c6977513e4adbccb07ff2d94fec6c13d 581 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 306 318 7.8E-6 T 15-10-2018 Trad_1686 c6977513e4adbccb07ff2d94fec6c13d 581 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 216 237 7.8E-6 T 15-10-2018 Trad_1686 c6977513e4adbccb07ff2d94fec6c13d 581 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 80 105 7.8E-6 T 15-10-2018 Trad_1686 c6977513e4adbccb07ff2d94fec6c13d 581 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 238 264 7.8E-6 T 15-10-2018 Trad_1686 c6977513e4adbccb07ff2d94fec6c13d 581 Pfam PF00361 Proton-conducting membrane transporter 131 371 3.5E-40 T 15-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Trad_2391 bb0e37a21c8fdb2df0b4c79dee288316 410 Gene3D G3DSA:2.40.340.10 337 403 2.1E-116 T 15-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Trad_2391 bb0e37a21c8fdb2df0b4c79dee288316 410 SMART SM00852 190 325 3.3E-38 T 15-10-2018 IPR001453 MoaB/Mog domain Trad_2391 bb0e37a21c8fdb2df0b4c79dee288316 410 SUPERFAMILY SSF63882 14 186 8.63E-50 T 15-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Trad_2391 bb0e37a21c8fdb2df0b4c79dee288316 410 Pfam PF00994 Probable molybdopterin binding domain 190 320 6.4E-22 T 15-10-2018 IPR001453 MoaB/Mog domain Trad_2391 bb0e37a21c8fdb2df0b4c79dee288316 410 Gene3D G3DSA:2.170.190.11 56 151 2.1E-116 T 15-10-2018 Trad_2391 bb0e37a21c8fdb2df0b4c79dee288316 410 Gene3D G3DSA:3.40.980.10 185 334 2.1E-116 T 15-10-2018 IPR036425 MoaB/Mog-like domain superfamily Trad_2391 bb0e37a21c8fdb2df0b4c79dee288316 410 Pfam PF03453 MoeA N-terminal region (domain I and II) 14 177 2.1E-37 T 15-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Trad_2391 bb0e37a21c8fdb2df0b4c79dee288316 410 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 186 318 1.4E-27 T 15-10-2018 IPR001453 MoaB/Mog domain Trad_2391 bb0e37a21c8fdb2df0b4c79dee288316 410 Gene3D G3DSA:3.90.105.10 33 184 2.1E-116 T 15-10-2018 Trad_2391 bb0e37a21c8fdb2df0b4c79dee288316 410 SUPERFAMILY SSF53218 187 328 1.31E-38 T 15-10-2018 IPR036425 MoaB/Mog-like domain superfamily Trad_2391 bb0e37a21c8fdb2df0b4c79dee288316 410 SUPERFAMILY SSF63867 338 410 4.97E-12 T 15-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Trad_2391 bb0e37a21c8fdb2df0b4c79dee288316 410 Pfam PF03454 MoeA C-terminal region (domain IV) 343 409 1.3E-13 T 15-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Trad_0277 8812f6d4321e00a63a9c49960f8c6167 280 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 237 244 - T 15-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Trad_0277 8812f6d4321e00a63a9c49960f8c6167 280 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 75 160 8.6E-25 T 15-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Trad_0277 8812f6d4321e00a63a9c49960f8c6167 280 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 170 269 4.4E-38 T 15-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Trad_0277 8812f6d4321e00a63a9c49960f8c6167 280 SUPERFAMILY SSF46609 72 163 1.17E-30 T 15-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Trad_0277 8812f6d4321e00a63a9c49960f8c6167 280 Gene3D G3DSA:2.40.500.20 166 277 3.6E-44 T 15-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Trad_0277 8812f6d4321e00a63a9c49960f8c6167 280 SUPERFAMILY SSF54719 165 271 5.5E-42 T 15-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Trad_0277 8812f6d4321e00a63a9c49960f8c6167 280 Gene3D G3DSA:1.10.287.990 92 161 1.7E-26 T 15-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Trad_0277 8812f6d4321e00a63a9c49960f8c6167 280 PRINTS PR01703 Manganese superoxide dismutase signature 78 89 6.3E-23 T 15-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Trad_0277 8812f6d4321e00a63a9c49960f8c6167 280 PRINTS PR01703 Manganese superoxide dismutase signature 235 247 6.3E-23 T 15-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Trad_0277 8812f6d4321e00a63a9c49960f8c6167 280 PRINTS PR01703 Manganese superoxide dismutase signature 145 158 6.3E-23 T 15-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Trad_0277 8812f6d4321e00a63a9c49960f8c6167 280 PRINTS PR01703 Manganese superoxide dismutase signature 99 112 6.3E-23 T 15-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Trad_0277 8812f6d4321e00a63a9c49960f8c6167 280 PRINTS PR01703 Manganese superoxide dismutase signature 198 206 6.3E-23 T 15-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Trad_2031 247f35470e62384173b0912fbbe440cb 249 SUPERFAMILY SSF64438 12 243 6.04E-77 T 15-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic Trad_2031 247f35470e62384173b0912fbbe440cb 249 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 27 243 2.3E-49 T 15-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase Trad_2031 247f35470e62384173b0912fbbe440cb 249 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 17 242 2.6E-71 T 15-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase Trad_2031 247f35470e62384173b0912fbbe440cb 249 Gene3D G3DSA:3.60.140.10 3 245 3.8E-82 T 15-10-2018 IPR038371 Multi-copper polyphenol oxidoreductase superfamily Trad_0204 b1d40f9b24ab431bd78481da403f9e70 591 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 191 323 8.2E-42 T 15-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 Trad_0204 b1d40f9b24ab431bd78481da403f9e70 591 SUPERFAMILY SSF52518 358 552 1.13E-63 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold Trad_0204 b1d40f9b24ab431bd78481da403f9e70 591 SUPERFAMILY SSF52467 185 347 8.28E-58 T 15-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily Trad_0204 b1d40f9b24ab431bd78481da403f9e70 591 Gene3D G3DSA:3.40.50.970 349 527 6.8E-123 T 15-10-2018 Trad_0204 b1d40f9b24ab431bd78481da403f9e70 591 Gene3D G3DSA:3.40.50.1220 190 348 6.8E-123 T 15-10-2018 Trad_0204 b1d40f9b24ab431bd78481da403f9e70 591 Gene3D G3DSA:3.40.50.970 1 172 2.9E-69 T 15-10-2018 Trad_0204 b1d40f9b24ab431bd78481da403f9e70 591 SUPERFAMILY SSF52518 1 170 4.51E-61 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold Trad_0204 b1d40f9b24ab431bd78481da403f9e70 591 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 415 434 - T 15-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 Trad_0204 b1d40f9b24ab431bd78481da403f9e70 591 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 379 526 1.0E-47 T 15-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 Trad_0204 b1d40f9b24ab431bd78481da403f9e70 591 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 1 167 9.9E-56 T 15-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 Trad_0204 b1d40f9b24ab431bd78481da403f9e70 591 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 1 549 5.7E-233 T 15-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 Trad_2376 9275a06b544e56132a3307a48e3a7c44 196 Pfam PF13662 Toprim domain 81 169 3.6E-23 T 15-10-2018 IPR006171 TOPRIM domain Trad_2376 9275a06b544e56132a3307a48e3a7c44 196 Hamap MF_00017 Recombination protein RecR [recR]. 1 196 101.254 T 15-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 Trad_2376 9275a06b544e56132a3307a48e3a7c44 196 SUPERFAMILY SSF111304 1 196 1.16E-74 T 15-10-2018 IPR023627 Recombination protein RecR Trad_2376 9275a06b544e56132a3307a48e3a7c44 196 Gene3D G3DSA:1.10.8.420 1 52 8.9E-24 T 15-10-2018 Trad_2376 9275a06b544e56132a3307a48e3a7c44 196 Gene3D G3DSA:3.30.60.80 54 76 4.5E-9 T 15-10-2018 Trad_2376 9275a06b544e56132a3307a48e3a7c44 196 Gene3D G3DSA:3.40.1360.10 77 196 2.1E-41 T 15-10-2018 Trad_2376 9275a06b544e56132a3307a48e3a7c44 196 Pfam PF02132 RecR protein 39 77 2.6E-15 T 15-10-2018 IPR023628 Recombination protein RecR, C4-type zinc finger Trad_2376 9275a06b544e56132a3307a48e3a7c44 196 SMART SM00493 80 163 2.5E-12 T 15-10-2018 IPR006171 TOPRIM domain Trad_2376 9275a06b544e56132a3307a48e3a7c44 196 TIGRFAM TIGR00615 recR: recombination protein RecR 2 194 3.2E-75 T 15-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 Trad_0188 908e707a286c0dc3c665573777eb949f 250 Pfam PF12695 Alpha/beta hydrolase family 72 235 4.0E-35 T 15-10-2018 IPR029059 Alpha/beta hydrolase fold-5 Trad_0188 908e707a286c0dc3c665573777eb949f 250 SUPERFAMILY SSF53474 36 220 5.4E-21 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold Trad_0188 908e707a286c0dc3c665573777eb949f 250 ProSitePatterns PS00435 Peroxidases proximal heme-ligand signature. 128 138 - T 15-10-2018 IPR019793 Peroxidases heam-ligand binding site Reactome: R-HSA-2408557 Trad_0188 908e707a286c0dc3c665573777eb949f 250 Gene3D G3DSA:3.40.50.1820 43 223 1.6E-17 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold Trad_1453 c0e835a413a9457cd5849552f8e3ae19 355 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 92 111 1.1E-24 T 15-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 Trad_1453 c0e835a413a9457cd5849552f8e3ae19 355 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 167 188 1.1E-24 T 15-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 Trad_1453 c0e835a413a9457cd5849552f8e3ae19 355 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 40 56 1.1E-24 T 15-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 Trad_1453 c0e835a413a9457cd5849552f8e3ae19 355 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 220 230 1.1E-24 T 15-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 Trad_1453 c0e835a413a9457cd5849552f8e3ae19 355 Pfam PF00579 tRNA synthetases class I (W and Y) 26 308 2.7E-76 T 15-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Trad_1453 c0e835a413a9457cd5849552f8e3ae19 355 Gene3D G3DSA:1.10.240.10 211 322 6.0E-125 T 15-10-2018 Trad_1453 c0e835a413a9457cd5849552f8e3ae19 355 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 26 353 6.2E-107 T 15-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 Trad_1453 c0e835a413a9457cd5849552f8e3ae19 355 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 36 45 - T 15-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Trad_1453 c0e835a413a9457cd5849552f8e3ae19 355 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 27 355 39.668 T 15-10-2018 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 Trad_1453 c0e835a413a9457cd5849552f8e3ae19 355 Gene3D G3DSA:3.40.50.620 30 353 6.0E-125 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Trad_1453 c0e835a413a9457cd5849552f8e3ae19 355 SUPERFAMILY SSF52374 29 353 2.03E-89 T 15-10-2018 Trad_0526 557c931d7da77b90afaeee2fd1bd5f74 459 SUPERFAMILY SSF51126 10 448 6.65E-41 T 15-10-2018 IPR011050 Pectin lyase fold/virulence factor Trad_0526 557c931d7da77b90afaeee2fd1bd5f74 459 Gene3D G3DSA:2.160.20.10 26 448 3.0E-35 T 15-10-2018 IPR012334 Pectin lyase fold Trad_0764 c6e71ca7ff5bc312d0d9beff392083aa 761 SMART SM00052 497 749 4.1E-45 T 15-10-2018 IPR001633 EAL domain Trad_0764 c6e71ca7ff5bc312d0d9beff392083aa 761 SUPERFAMILY SSF55781 169 319 3.68E-11 T 15-10-2018 Trad_0764 c6e71ca7ff5bc312d0d9beff392083aa 761 Gene3D G3DSA:3.30.70.270 322 500 8.0E-63 T 15-10-2018 Trad_0764 c6e71ca7ff5bc312d0d9beff392083aa 761 Gene3D G3DSA:3.30.450.40 159 320 1.2E-7 T 15-10-2018 IPR029016 GAF-like domain superfamily Trad_0764 c6e71ca7ff5bc312d0d9beff392083aa 761 Pfam PF00563 EAL domain 504 744 4.1E-43 T 15-10-2018 IPR001633 EAL domain Trad_0764 c6e71ca7ff5bc312d0d9beff392083aa 761 Gene3D G3DSA:3.20.20.450 501 752 9.6E-56 T 15-10-2018 IPR035919 EAL domain superfamily Trad_0764 c6e71ca7ff5bc312d0d9beff392083aa 761 Pfam PF00990 Diguanylate cyclase, GGDEF domain 328 481 2.1E-48 T 15-10-2018 IPR000160 GGDEF domain Trad_0764 c6e71ca7ff5bc312d0d9beff392083aa 761 SMART SM00267 317 487 1.7E-69 T 15-10-2018 IPR000160 GGDEF domain Trad_0764 c6e71ca7ff5bc312d0d9beff392083aa 761 Pfam PF08448 PAS fold 28 140 2.2E-7 T 15-10-2018 IPR013656 PAS fold-4 Trad_0764 c6e71ca7ff5bc312d0d9beff392083aa 761 SUPERFAMILY SSF55785 33 147 5.15E-11 T 15-10-2018 IPR035965 PAS domain superfamily Trad_0764 c6e71ca7ff5bc312d0d9beff392083aa 761 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 324 485 6.7E-42 T 15-10-2018 IPR000160 GGDEF domain Trad_0764 c6e71ca7ff5bc312d0d9beff392083aa 761 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 24 145 2.3E-8 T 15-10-2018 IPR000014 PAS domain Trad_0764 c6e71ca7ff5bc312d0d9beff392083aa 761 SUPERFAMILY SSF141868 504 746 2.75E-45 T 15-10-2018 IPR035919 EAL domain superfamily Trad_0764 c6e71ca7ff5bc312d0d9beff392083aa 761 SUPERFAMILY SSF55073 333 489 1.18E-49 T 15-10-2018 IPR029787 Nucleotide cyclase Trad_0764 c6e71ca7ff5bc312d0d9beff392083aa 761 Gene3D G3DSA:3.30.450.20 23 150 9.7E-16 T 15-10-2018 Trad_2663 894f27525ca944c4b739aa4dea4eaa4d 213 Pfam PF00027 Cyclic nucleotide-binding domain 24 99 1.7E-14 T 15-10-2018 IPR000595 Cyclic nucleotide-binding domain Trad_2663 894f27525ca944c4b739aa4dea4eaa4d 213 SUPERFAMILY SSF46785 132 211 6.2E-16 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Trad_2663 894f27525ca944c4b739aa4dea4eaa4d 213 Gene3D G3DSA:1.10.10.10 132 212 1.0E-19 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Trad_2663 894f27525ca944c4b739aa4dea4eaa4d 213 SUPERFAMILY SSF51206 22 121 2.49E-19 T 15-10-2018 IPR018490 Cyclic nucleotide-binding-like Trad_2663 894f27525ca944c4b739aa4dea4eaa4d 213 Pfam PF13545 Crp-like helix-turn-helix domain 135 209 3.0E-16 T 15-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Trad_2663 894f27525ca944c4b739aa4dea4eaa4d 213 Gene3D G3DSA:2.60.120.10 23 131 3.4E-20 T 15-10-2018 IPR014710 RmlC-like jelly roll fold Trad_2663 894f27525ca944c4b739aa4dea4eaa4d 213 SMART SM00419 154 202 1.1E-9 T 15-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Trad_2663 894f27525ca944c4b739aa4dea4eaa4d 213 SMART SM00100 4 122 5.0E-6 T 15-10-2018 IPR000595 Cyclic nucleotide-binding domain Trad_2669 f939de8565da8cc364770bee820220cc 434 SUPERFAMILY SSF102114 28 345 4.71E-45 T 15-10-2018 Trad_2669 f939de8565da8cc364770bee820220cc 434 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 175 398 5.0E-20 T 15-10-2018 Trad_2669 f939de8565da8cc364770bee820220cc 434 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 275 364 1.0E-18 T 15-10-2018 IPR023885 4Fe4S-binding SPASM domain Trad_2669 f939de8565da8cc364770bee820220cc 434 SUPERFAMILY SSF103642 413 432 3.27E-5 T 15-10-2018 Trad_2669 f939de8565da8cc364770bee820220cc 434 Pfam PF13186 Iron-sulfur cluster-binding domain 276 336 5.3E-7 T 15-10-2018 IPR023885 4Fe4S-binding SPASM domain Trad_2669 f939de8565da8cc364770bee820220cc 434 Gene3D G3DSA:3.20.20.70 15 386 4.3E-112 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Trad_2669 f939de8565da8cc364770bee820220cc 434 TIGRFAM TIGR03942 sulfatase_rSAM: anaerobic sulfatase maturase 19 382 5.3E-148 T 15-10-2018 Trad_2669 f939de8565da8cc364770bee820220cc 434 Gene3D G3DSA:3.10.450.50 395 433 3.0E-6 T 15-10-2018 Trad_2669 f939de8565da8cc364770bee820220cc 434 Pfam PF04055 Radical SAM superfamily 28 193 1.1E-13 T 15-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Trad_2669 f939de8565da8cc364770bee820220cc 434 Pfam PF02810 SEC-C motif 414 431 4.7E-8 T 15-10-2018 IPR004027 SEC-C motif Trad_0635 f1763fb2b71aa2b53da31b9f5e59d69e 236 Gene3D G3DSA:2.40.10.10 108 221 9.8E-15 T 15-10-2018 Trad_0635 f1763fb2b71aa2b53da31b9f5e59d69e 236 Gene3D G3DSA:2.40.10.10 16 107 9.8E-15 T 15-10-2018 Trad_0635 f1763fb2b71aa2b53da31b9f5e59d69e 236 SUPERFAMILY SSF50494 4 216 9.19E-11 T 15-10-2018 IPR009003 Peptidase S1, PA clan Trad_0364 578f639105d0c579838f6f7ca351c0e3 130 Pfam PF01042 Endoribonuclease L-PSP 11 126 1.5E-44 T 15-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 Trad_0364 578f639105d0c579838f6f7ca351c0e3 130 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 103 121 - T 15-10-2018 IPR019897 RidA, conserved site Reactome: R-HSA-8849175 Trad_0364 578f639105d0c579838f6f7ca351c0e3 130 Gene3D G3DSA:3.30.1330.40 2 127 6.7E-56 T 15-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Trad_0364 578f639105d0c579838f6f7ca351c0e3 130 SUPERFAMILY SSF55298 5 128 2.98E-50 T 15-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Trad_0364 578f639105d0c579838f6f7ca351c0e3 130 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 6 126 6.9E-53 T 15-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 Trad_2224 c0be9d0d0e456de7f972d5557c5572f5 288 Gene3D G3DSA:1.10.357.140 15 178 6.6E-52 T 15-10-2018 Trad_2224 c0be9d0d0e456de7f972d5557c5572f5 288 TIGRFAM TIGR01475 ubiA_other: putative 4-hydroxybenzoate polyprenyltransferase 8 286 1.4E-92 T 15-10-2018 IPR006371 4-hydroxybenzoate polyprenyltransferase-related Trad_2224 c0be9d0d0e456de7f972d5557c5572f5 288 Pfam PF01040 UbiA prenyltransferase family 25 266 3.6E-50 T 15-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 Trad_2907 d59ae3404957c7dbd00e63806667a403 460 PIRSF PIRSF000362 4 457 5.8E-160 T 15-10-2018 IPR021163 Ferredoxin-NADP+ reductase, adrenodoxin-type GO:0016491|GO:0055114 Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 Trad_2907 d59ae3404957c7dbd00e63806667a403 460 Gene3D G3DSA:3.40.50.720 12 452 4.9E-162 T 15-10-2018 Trad_2907 d59ae3404957c7dbd00e63806667a403 460 SUPERFAMILY SSF51971 9 325 2.47E-53 T 15-10-2018 Trad_2907 d59ae3404957c7dbd00e63806667a403 460 SUPERFAMILY SSF51971 356 451 2.06E-5 T 15-10-2018 Trad_2907 d59ae3404957c7dbd00e63806667a403 460 Gene3D G3DSA:3.50.50.60 53 330 4.9E-162 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Trad_2907 d59ae3404957c7dbd00e63806667a403 460 PRINTS PR00419 Adrenodoxin reductase family signature 36 49 5.2E-19 T 15-10-2018 Trad_2907 d59ae3404957c7dbd00e63806667a403 460 PRINTS PR00419 Adrenodoxin reductase family signature 151 165 5.2E-19 T 15-10-2018 Trad_2907 d59ae3404957c7dbd00e63806667a403 460 PRINTS PR00419 Adrenodoxin reductase family signature 79 89 5.2E-19 T 15-10-2018 Trad_2907 d59ae3404957c7dbd00e63806667a403 460 PRINTS PR00419 Adrenodoxin reductase family signature 11 33 5.2E-19 T 15-10-2018 Trad_2907 d59ae3404957c7dbd00e63806667a403 460 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 11 188 7.6E-8 T 15-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Trad_0767 a8d73ef40ece098875197d99957d486a 304 Pfam PF01297 Zinc-uptake complex component A periplasmic 35 301 1.5E-70 T 15-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 Trad_0767 a8d73ef40ece098875197d99957d486a 304 Gene3D G3DSA:3.40.50.1980 32 191 4.6E-45 T 15-10-2018 Trad_0767 a8d73ef40ece098875197d99957d486a 304 Gene3D G3DSA:3.40.50.1980 192 303 2.3E-32 T 15-10-2018 Trad_0767 a8d73ef40ece098875197d99957d486a 304 PRINTS PR00691 Adhesin B signature 57 75 3.4E-34 T 15-10-2018 IPR006129 Adhesin B GO:0007155 Trad_0767 a8d73ef40ece098875197d99957d486a 304 PRINTS PR00691 Adhesin B signature 132 151 3.4E-34 T 15-10-2018 IPR006129 Adhesin B GO:0007155 Trad_0767 a8d73ef40ece098875197d99957d486a 304 PRINTS PR00691 Adhesin B signature 216 234 3.4E-34 T 15-10-2018 IPR006129 Adhesin B GO:0007155 Trad_0767 a8d73ef40ece098875197d99957d486a 304 PRINTS PR00691 Adhesin B signature 282 300 3.4E-34 T 15-10-2018 IPR006129 Adhesin B GO:0007155 Trad_0767 a8d73ef40ece098875197d99957d486a 304 PRINTS PR00691 Adhesin B signature 76 95 3.4E-34 T 15-10-2018 IPR006129 Adhesin B GO:0007155 Trad_0767 a8d73ef40ece098875197d99957d486a 304 PRINTS PR00691 Adhesin B signature 190 207 3.4E-34 T 15-10-2018 IPR006129 Adhesin B GO:0007155 Trad_0767 a8d73ef40ece098875197d99957d486a 304 PRINTS PR00691 Adhesin B signature 261 279 3.4E-34 T 15-10-2018 IPR006129 Adhesin B GO:0007155 Trad_0767 a8d73ef40ece098875197d99957d486a 304 PRINTS PR00691 Adhesin B signature 32 53 3.4E-34 T 15-10-2018 IPR006129 Adhesin B GO:0007155 Trad_0767 a8d73ef40ece098875197d99957d486a 304 PRINTS PR00691 Adhesin B signature 239 256 3.4E-34 T 15-10-2018 IPR006129 Adhesin B GO:0007155 Trad_0767 a8d73ef40ece098875197d99957d486a 304 PRINTS PR00690 Adhesin family signature 63 76 2.7E-28 T 15-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 Trad_0767 a8d73ef40ece098875197d99957d486a 304 PRINTS PR00690 Adhesin family signature 243 261 2.7E-28 T 15-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 Trad_0767 a8d73ef40ece098875197d99957d486a 304 PRINTS PR00690 Adhesin family signature 269 288 2.7E-28 T 15-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 Trad_0767 a8d73ef40ece098875197d99957d486a 304 PRINTS PR00690 Adhesin family signature 32 50 2.7E-28 T 15-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 Trad_0767 a8d73ef40ece098875197d99957d486a 304 PRINTS PR00690 Adhesin family signature 190 211 2.7E-28 T 15-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 Trad_0767 a8d73ef40ece098875197d99957d486a 304 PRINTS PR00690 Adhesin family signature 76 93 2.7E-28 T 15-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 Trad_0767 a8d73ef40ece098875197d99957d486a 304 SUPERFAMILY SSF53807 30 303 5.4E-76 T 15-10-2018 Trad_0696 47c7f7fa57d0caa5bd9bc8ebaaf1b80e 518 SMART SM00382 280 480 0.0016 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_0696 47c7f7fa57d0caa5bd9bc8ebaaf1b80e 518 SMART SM00382 31 219 2.3E-12 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_0696 47c7f7fa57d0caa5bd9bc8ebaaf1b80e 518 Gene3D G3DSA:3.40.50.300 258 516 6.7E-37 T 15-10-2018 Trad_0696 47c7f7fa57d0caa5bd9bc8ebaaf1b80e 518 SUPERFAMILY SSF52540 272 493 1.12E-37 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_0696 47c7f7fa57d0caa5bd9bc8ebaaf1b80e 518 ProSitePatterns PS00211 ABC transporters family signature. 396 410 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Trad_0696 47c7f7fa57d0caa5bd9bc8ebaaf1b80e 518 Gene3D G3DSA:3.40.50.300 2 244 9.4E-57 T 15-10-2018 Trad_0696 47c7f7fa57d0caa5bd9bc8ebaaf1b80e 518 Pfam PF00005 ABC transporter 22 170 3.1E-28 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Trad_0696 47c7f7fa57d0caa5bd9bc8ebaaf1b80e 518 Pfam PF00005 ABC transporter 273 423 1.5E-16 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Trad_0696 47c7f7fa57d0caa5bd9bc8ebaaf1b80e 518 SUPERFAMILY SSF52540 5 232 1.15E-55 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_1420 3ac105526283f6aafca551f13337e5ae 1134 TIGRFAM TIGR02456 treS_nterm: trehalose synthase 41 581 4.6E-275 T 15-10-2018 IPR012810 Trehalose synthase/alpha-amylase, N-terminal GO:0003824|GO:0005975 KEGG: 00500+5.4.99.16|MetaCyc: PWY-2622|MetaCyc: PWY-7900 Trad_1420 3ac105526283f6aafca551f13337e5ae 1134 Gene3D G3DSA:3.90.400.10 139 207 5.1E-203 T 15-10-2018 Trad_1420 3ac105526283f6aafca551f13337e5ae 1134 Pfam PF16657 Maltogenic Amylase, C-terminal domain 499 578 1.2E-26 T 15-10-2018 IPR032091 Maltogenic Amylase, C-terminal Trad_1420 3ac105526283f6aafca551f13337e5ae 1134 SMART SM00642 49 449 2.6E-105 T 15-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Trad_1420 3ac105526283f6aafca551f13337e5ae 1134 Gene3D G3DSA:2.60.40.1180 499 582 4.6E-28 T 15-10-2018 IPR013780 Glycosyl hydrolase, all-beta Trad_1420 3ac105526283f6aafca551f13337e5ae 1134 SUPERFAMILY SSF56112 777 1028 6.38E-10 T 15-10-2018 IPR011009 Protein kinase-like domain superfamily Trad_1420 3ac105526283f6aafca551f13337e5ae 1134 Pfam PF00128 Alpha amylase, catalytic domain 64 419 2.6E-69 T 15-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Trad_1420 3ac105526283f6aafca551f13337e5ae 1134 Gene3D G3DSA:3.20.20.80 41 492 5.1E-203 T 15-10-2018 Trad_1420 3ac105526283f6aafca551f13337e5ae 1134 Gene3D G3DSA:3.90.1200.10 871 1133 4.9E-58 T 15-10-2018 Trad_1420 3ac105526283f6aafca551f13337e5ae 1134 SUPERFAMILY SSF51445 39 492 4.48E-121 T 15-10-2018 IPR017853 Glycoside hydrolase superfamily Trad_1420 3ac105526283f6aafca551f13337e5ae 1134 SUPERFAMILY SSF51011 505 582 1.2E-16 T 15-10-2018 Trad_2962 9228c10e5ae3c9e0489567dd7f571a07 526 PRINTS PR01806 Virulence factor MviN signature 48 67 6.0E-36 T 15-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Trad_2962 9228c10e5ae3c9e0489567dd7f571a07 526 PRINTS PR01806 Virulence factor MviN signature 67 83 6.0E-36 T 15-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Trad_2962 9228c10e5ae3c9e0489567dd7f571a07 526 PRINTS PR01806 Virulence factor MviN signature 143 167 6.0E-36 T 15-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Trad_2962 9228c10e5ae3c9e0489567dd7f571a07 526 PRINTS PR01806 Virulence factor MviN signature 264 290 6.0E-36 T 15-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Trad_2962 9228c10e5ae3c9e0489567dd7f571a07 526 PRINTS PR01806 Virulence factor MviN signature 167 188 6.0E-36 T 15-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Trad_2962 9228c10e5ae3c9e0489567dd7f571a07 526 PRINTS PR01806 Virulence factor MviN signature 418 435 6.0E-36 T 15-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Trad_2962 9228c10e5ae3c9e0489567dd7f571a07 526 Pfam PF03023 MviN-like protein 47 475 1.5E-79 T 15-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Trad_2962 9228c10e5ae3c9e0489567dd7f571a07 526 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 24 512 3.4E-91 T 15-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Trad_1076 46ad3d8e95587ec1236bd51faf20edc3 556 Pfam PF11734 TilS substrate C-terminal domain 336 396 1.1E-9 T 15-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 Trad_1076 46ad3d8e95587ec1236bd51faf20edc3 556 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 20 200 1.9E-48 T 15-10-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 Trad_1076 46ad3d8e95587ec1236bd51faf20edc3 556 SMART SM00977 335 411 2.8E-14 T 15-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 Trad_1076 46ad3d8e95587ec1236bd51faf20edc3 556 SUPERFAMILY SSF52402 12 224 1.56E-50 T 15-10-2018 Trad_1076 46ad3d8e95587ec1236bd51faf20edc3 556 SUPERFAMILY SSF56037 335 397 9.42E-12 T 15-10-2018 Trad_1076 46ad3d8e95587ec1236bd51faf20edc3 556 SUPERFAMILY SSF53927 399 548 1.84E-49 T 15-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 Trad_1076 46ad3d8e95587ec1236bd51faf20edc3 556 Gene3D G3DSA:3.40.50.620 11 229 5.1E-62 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Trad_1076 46ad3d8e95587ec1236bd51faf20edc3 556 Pfam PF01171 PP-loop family 21 196 3.5E-48 T 15-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 Trad_1076 46ad3d8e95587ec1236bd51faf20edc3 556 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 452 489 - T 15-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 Trad_1076 46ad3d8e95587ec1236bd51faf20edc3 556 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 7 282 22.759 T 15-10-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 Trad_1076 46ad3d8e95587ec1236bd51faf20edc3 556 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 407 547 40.877 T 15-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 Trad_1076 46ad3d8e95587ec1236bd51faf20edc3 556 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 337 377 1.1E-10 T 15-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 Trad_1076 46ad3d8e95587ec1236bd51faf20edc3 556 Gene3D G3DSA:3.40.140.10 392 554 3.0E-55 T 15-10-2018 Trad_1076 46ad3d8e95587ec1236bd51faf20edc3 556 Pfam PF14437 MafB19-like deaminase 402 546 1.3E-29 T 15-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 Trad_2887 690a00ba4c8846dc56dd3aa274568b48 349 Gene3D G3DSA:3.90.180.10 8 333 5.3E-101 T 15-10-2018 Trad_2887 690a00ba4c8846dc56dd3aa274568b48 349 Gene3D G3DSA:3.40.50.720 158 295 5.3E-101 T 15-10-2018 Trad_2887 690a00ba4c8846dc56dd3aa274568b48 349 SUPERFAMILY SSF50129 1 177 3.96E-47 T 15-10-2018 IPR011032 GroES-like superfamily Trad_2887 690a00ba4c8846dc56dd3aa274568b48 349 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 141 3.6E-28 T 15-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Trad_2887 690a00ba4c8846dc56dd3aa274568b48 349 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 62 76 - T 15-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 Trad_2887 690a00ba4c8846dc56dd3aa274568b48 349 Pfam PF00107 Zinc-binding dehydrogenase 181 309 3.7E-18 T 15-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Trad_2887 690a00ba4c8846dc56dd3aa274568b48 349 SUPERFAMILY SSF51735 145 313 1.62E-34 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_0830 bcb3123f6e990f56edb2a8b51454dd25 843 SMART SM00533 286 593 2.3E-91 T 15-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 Trad_0830 bcb3123f6e990f56edb2a8b51454dd25 843 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 12 832 9.3E-302 T 15-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 Trad_0830 bcb3123f6e990f56edb2a8b51454dd25 843 SUPERFAMILY SSF55271 10 118 1.83E-34 T 15-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 Trad_0830 bcb3123f6e990f56edb2a8b51454dd25 843 PIRSF PIRSF037677 10 190 3.7E-20 T 15-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 Trad_0830 bcb3123f6e990f56edb2a8b51454dd25 843 PIRSF PIRSF037677 219 820 8.7E-113 T 15-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 Trad_0830 bcb3123f6e990f56edb2a8b51454dd25 843 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 688 704 - T 15-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 Trad_0830 bcb3123f6e990f56edb2a8b51454dd25 843 Pfam PF05188 MutS domain II 131 251 6.8E-15 T 15-10-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 Trad_0830 bcb3123f6e990f56edb2a8b51454dd25 843 Gene3D G3DSA:3.40.50.300 572 825 3.2E-95 T 15-10-2018 Trad_0830 bcb3123f6e990f56edb2a8b51454dd25 843 Gene3D G3DSA:1.10.1420.10 400 538 2.3E-87 T 15-10-2018 Trad_0830 bcb3123f6e990f56edb2a8b51454dd25 843 Pfam PF05192 MutS domain III 270 562 6.6E-32 T 15-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 Trad_0830 bcb3123f6e990f56edb2a8b51454dd25 843 Pfam PF05190 MutS family domain IV 431 520 2.1E-23 T 15-10-2018 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 Trad_0830 bcb3123f6e990f56edb2a8b51454dd25 843 Pfam PF00488 MutS domain V 610 796 3.8E-79 T 15-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 Trad_0830 bcb3123f6e990f56edb2a8b51454dd25 843 Gene3D G3DSA:1.10.1420.10 273 565 2.3E-87 T 15-10-2018 Trad_0830 bcb3123f6e990f56edb2a8b51454dd25 843 SMART SM00534 607 794 1.4E-110 T 15-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 Trad_0830 bcb3123f6e990f56edb2a8b51454dd25 843 Gene3D G3DSA:3.40.1170.10 1 124 2.2E-44 T 15-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 Trad_0830 bcb3123f6e990f56edb2a8b51454dd25 843 Pfam PF01624 MutS domain I 13 122 1.2E-33 T 15-10-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 Trad_0830 bcb3123f6e990f56edb2a8b51454dd25 843 Gene3D G3DSA:3.30.420.110 129 262 5.8E-35 T 15-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 Trad_0830 bcb3123f6e990f56edb2a8b51454dd25 843 SUPERFAMILY SSF48334 270 567 1.23E-70 T 15-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily Trad_0830 bcb3123f6e990f56edb2a8b51454dd25 843 SUPERFAMILY SSF53150 117 266 4.05E-27 T 15-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 Trad_0830 bcb3123f6e990f56edb2a8b51454dd25 843 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 11 827 22.204 T 15-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 Trad_0830 bcb3123f6e990f56edb2a8b51454dd25 843 SUPERFAMILY SSF52540 570 797 3.48E-56 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_2450 d75ffdb8558599de5f7c567c6611b0bc 265 Gene3D G3DSA:3.30.470.20 113 249 1.1E-89 T 15-10-2018 Trad_2450 d75ffdb8558599de5f7c567c6611b0bc 265 ProSitePatterns PS01057 SAICAR synthetase signature 1. 114 128 - T 15-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Trad_2450 d75ffdb8558599de5f7c567c6611b0bc 265 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 30 262 3.0E-69 T 15-10-2018 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 Trad_2450 d75ffdb8558599de5f7c567c6611b0bc 265 SUPERFAMILY SSF56104 31 262 2.09E-78 T 15-10-2018 Trad_2450 d75ffdb8558599de5f7c567c6611b0bc 265 Pfam PF01259 SAICAR synthetase 35 260 8.6E-61 T 15-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Trad_2450 d75ffdb8558599de5f7c567c6611b0bc 265 ProSitePatterns PS01058 SAICAR synthetase signature 2. 201 209 - T 15-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Trad_2450 d75ffdb8558599de5f7c567c6611b0bc 265 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 32 263 31.044 T 15-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Trad_2450 d75ffdb8558599de5f7c567c6611b0bc 265 Gene3D G3DSA:3.30.200.20 35 260 1.1E-89 T 15-10-2018 Trad_0002 97b0b29e366455601d242cb804a933af 363 Gene3D G3DSA:3.10.150.10 243 362 3.5E-31 T 15-10-2018 Trad_0002 97b0b29e366455601d242cb804a933af 363 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 241 361 1.9E-15 T 15-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 Trad_0002 97b0b29e366455601d242cb804a933af 363 SUPERFAMILY SSF55979 240 362 1.57E-19 T 15-10-2018 Trad_0002 97b0b29e366455601d242cb804a933af 363 SUPERFAMILY SSF55979 1 116 1.05E-12 T 15-10-2018 Trad_0002 97b0b29e366455601d242cb804a933af 363 SMART SM00480 17 356 3.8E-50 T 15-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 Trad_0002 97b0b29e366455601d242cb804a933af 363 SUPERFAMILY SSF55979 129 241 1.2E-16 T 15-10-2018 Trad_0002 97b0b29e366455601d242cb804a933af 363 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 112 3.1E-13 T 15-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 Trad_0002 97b0b29e366455601d242cb804a933af 363 Gene3D G3DSA:3.10.150.10 127 242 2.4E-27 T 15-10-2018 Trad_0002 97b0b29e366455601d242cb804a933af 363 Pfam PF02767 DNA polymerase III beta subunit, central domain 130 238 4.8E-16 T 15-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 Trad_0002 97b0b29e366455601d242cb804a933af 363 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 362 2.9E-53 T 15-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 Trad_0002 97b0b29e366455601d242cb804a933af 363 PIRSF PIRSF000804 1 363 9.2E-68 T 15-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 Trad_0002 97b0b29e366455601d242cb804a933af 363 Gene3D G3DSA:3.10.150.10 1 122 4.2E-22 T 15-10-2018 Trad_2852 65f83a6676fc87731bc658a5fb3d66b0 156 Pfam PF00293 NUDIX domain 23 109 2.8E-16 T 15-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Trad_2852 65f83a6676fc87731bc658a5fb3d66b0 156 Gene3D G3DSA:3.90.79.10 23 148 4.6E-26 T 15-10-2018 Trad_2852 65f83a6676fc87731bc658a5fb3d66b0 156 PRINTS PR00502 NUDIX hydrolase family signature 46 60 2.0E-6 T 15-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Trad_2852 65f83a6676fc87731bc658a5fb3d66b0 156 PRINTS PR00502 NUDIX hydrolase family signature 60 75 2.0E-6 T 15-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Trad_2852 65f83a6676fc87731bc658a5fb3d66b0 156 ProSitePatterns PS00893 Nudix box signature. 51 72 - T 15-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 Trad_2852 65f83a6676fc87731bc658a5fb3d66b0 156 SUPERFAMILY SSF55811 24 148 5.55E-22 T 15-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Trad_2197 4793a0cbcfd6f02f9f69fd09c5be428c 357 PIRSF PIRSF000451 1 357 3.3E-112 T 15-10-2018 IPR011141 Polyketide synthase, type III GO:0009058|GO:0016747 Trad_2197 4793a0cbcfd6f02f9f69fd09c5be428c 357 SUPERFAMILY SSF53901 8 209 3.39E-43 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 Trad_2197 4793a0cbcfd6f02f9f69fd09c5be428c 357 Pfam PF02797 Chalcone and stilbene synthases, C-terminal domain 219 354 7.6E-27 T 15-10-2018 IPR012328 Chalcone/stilbene synthase, C-terminal Trad_2197 4793a0cbcfd6f02f9f69fd09c5be428c 357 Gene3D G3DSA:3.40.47.10 215 357 8.1E-50 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 Trad_2197 4793a0cbcfd6f02f9f69fd09c5be428c 357 SUPERFAMILY SSF53901 216 354 8.06E-37 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 Trad_2197 4793a0cbcfd6f02f9f69fd09c5be428c 357 Pfam PF00195 Chalcone and stilbene synthases, N-terminal domain 66 207 1.2E-23 T 15-10-2018 IPR001099 Chalcone/stilbene synthase, N-terminal Trad_2197 4793a0cbcfd6f02f9f69fd09c5be428c 357 Gene3D G3DSA:3.40.47.10 1 212 5.8E-60 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 Trad_2623 788adabc28b0b79386b68be6cf9bd865 883 Gene3D G3DSA:3.40.50.720 212 333 7.5E-35 T 15-10-2018 Trad_2623 788adabc28b0b79386b68be6cf9bd865 883 SUPERFAMILY SSF55729 31 180 1.03E-18 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase Trad_2623 788adabc28b0b79386b68be6cf9bd865 883 Gene3D G3DSA:3.40.50.261 492 645 7.1E-26 T 15-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Trad_2623 788adabc28b0b79386b68be6cf9bd865 883 Pfam PF13549 ATP-grasp domain 666 881 1.5E-54 T 15-10-2018 Trad_2623 788adabc28b0b79386b68be6cf9bd865 883 Pfam PF13380 CoA binding domain 218 338 4.8E-17 T 15-10-2018 IPR003781 CoA-binding GO:0048037 Trad_2623 788adabc28b0b79386b68be6cf9bd865 883 SMART SM00881 214 304 5.9E-26 T 15-10-2018 IPR003781 CoA-binding GO:0048037 Trad_2623 788adabc28b0b79386b68be6cf9bd865 883 SUPERFAMILY SSF56059 673 881 1.86E-26 T 15-10-2018 Trad_2623 788adabc28b0b79386b68be6cf9bd865 883 Gene3D G3DSA:3.40.630.30 26 211 3.7E-36 T 15-10-2018 Trad_2623 788adabc28b0b79386b68be6cf9bd865 883 Gene3D G3DSA:3.40.50.261 334 491 3.3E-51 T 15-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Trad_2623 788adabc28b0b79386b68be6cf9bd865 883 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 355 488 3.3E-44 T 15-10-2018 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain Trad_2623 788adabc28b0b79386b68be6cf9bd865 883 Gene3D G3DSA:3.30.1490.20 691 763 3.7E-58 T 15-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Trad_2623 788adabc28b0b79386b68be6cf9bd865 883 Pfam PF13302 Acetyltransferase (GNAT) domain 36 172 1.1E-7 T 15-10-2018 IPR000182 GNAT domain Trad_2623 788adabc28b0b79386b68be6cf9bd865 883 SUPERFAMILY SSF52210 494 640 1.57E-15 T 15-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Trad_2623 788adabc28b0b79386b68be6cf9bd865 883 Gene3D G3DSA:3.30.470.20 673 879 3.7E-58 T 15-10-2018 Trad_2623 788adabc28b0b79386b68be6cf9bd865 883 SUPERFAMILY SSF52210 333 495 6.8E-38 T 15-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Trad_2623 788adabc28b0b79386b68be6cf9bd865 883 SUPERFAMILY SSF51735 213 334 5.73E-28 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_2463 18e7b95e6969d55b01bf020b34041ea0 274 TIGRFAM TIGR03707 PPK2_P_aer: polyphosphate kinase 2 11 236 3.6E-110 T 15-10-2018 IPR022486 Polyphosphate kinase 2, PA0141 GO:0006793|GO:0008976 KEGG: 00190+2.7.4.1 Trad_2463 18e7b95e6969d55b01bf020b34041ea0 274 Gene3D G3DSA:3.40.50.300 2 256 1.1E-92 T 15-10-2018 Trad_2463 18e7b95e6969d55b01bf020b34041ea0 274 SUPERFAMILY SSF52540 43 230 4.8E-30 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_2463 18e7b95e6969d55b01bf020b34041ea0 274 PIRSF PIRSF028756 2 270 2.1E-121 T 15-10-2018 IPR016898 Polyphosphate kinase 2 KEGG: 00190+2.7.4.1 Trad_2463 18e7b95e6969d55b01bf020b34041ea0 274 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 11 235 1.0E-102 T 15-10-2018 IPR022488 Polyphosphate kinase-2-related Trad_0011 ac9370698e21e7f92aa00601e68736c6 624 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 331 345 - T 15-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 Trad_0011 ac9370698e21e7f92aa00601e68736c6 624 Gene3D G3DSA:3.30.420.40 181 356 2.7E-149 T 15-10-2018 Trad_0011 ac9370698e21e7f92aa00601e68736c6 624 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 623 35.527 T 15-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 Trad_0011 ac9370698e21e7f92aa00601e68736c6 624 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 188 201 - T 15-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 Trad_0011 ac9370698e21e7f92aa00601e68736c6 624 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 4 594 9.8E-276 T 15-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 Trad_0011 ac9370698e21e7f92aa00601e68736c6 624 SUPERFAMILY SSF100920 378 534 1.22E-58 T 15-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 Trad_0011 ac9370698e21e7f92aa00601e68736c6 624 Gene3D G3DSA:2.60.34.10 370 594 1.0E-74 T 15-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 Trad_0011 ac9370698e21e7f92aa00601e68736c6 624 Gene3D G3DSA:3.90.640.10 220 309 2.7E-149 T 15-10-2018 Trad_0011 ac9370698e21e7f92aa00601e68736c6 624 Gene3D G3DSA:3.30.420.40 5 369 2.7E-149 T 15-10-2018 Trad_0011 ac9370698e21e7f92aa00601e68736c6 624 SUPERFAMILY SSF53067 183 376 8.84E-66 T 15-10-2018 Trad_0011 ac9370698e21e7f92aa00601e68736c6 624 SUPERFAMILY SSF53067 3 180 1.11E-60 T 15-10-2018 Trad_0011 ac9370698e21e7f92aa00601e68736c6 624 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 15-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 Trad_0011 ac9370698e21e7f92aa00601e68736c6 624 Gene3D G3DSA:3.30.30.30 66 115 2.7E-149 T 15-10-2018 Trad_0011 ac9370698e21e7f92aa00601e68736c6 624 PRINTS PR00301 70kDa heat shock protein signature 3 16 2.8E-75 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Trad_0011 ac9370698e21e7f92aa00601e68736c6 624 PRINTS PR00301 70kDa heat shock protein signature 53 61 2.8E-75 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Trad_0011 ac9370698e21e7f92aa00601e68736c6 624 PRINTS PR00301 70kDa heat shock protein signature 194 204 2.8E-75 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Trad_0011 ac9370698e21e7f92aa00601e68736c6 624 PRINTS PR00301 70kDa heat shock protein signature 328 344 2.8E-75 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Trad_0011 ac9370698e21e7f92aa00601e68736c6 624 PRINTS PR00301 70kDa heat shock protein signature 463 479 2.8E-75 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Trad_0011 ac9370698e21e7f92aa00601e68736c6 624 PRINTS PR00301 70kDa heat shock protein signature 31 43 2.8E-75 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Trad_0011 ac9370698e21e7f92aa00601e68736c6 624 PRINTS PR00301 70kDa heat shock protein signature 359 379 2.8E-75 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Trad_0011 ac9370698e21e7f92aa00601e68736c6 624 PRINTS PR00301 70kDa heat shock protein signature 135 155 2.8E-75 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Trad_0011 ac9370698e21e7f92aa00601e68736c6 624 PRINTS PR00301 70kDa heat shock protein signature 382 401 2.8E-75 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Trad_0011 ac9370698e21e7f92aa00601e68736c6 624 Pfam PF00012 Hsp70 protein 4 592 5.9E-239 T 15-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Trad_0749 a48644e169033f47f20cb8d4732fe6cd 548 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 485 537 9.4E-9 T 15-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Trad_0749 a48644e169033f47f20cb8d4732fe6cd 548 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 139 148 - T 15-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Trad_0749 a48644e169033f47f20cb8d4732fe6cd 548 SUPERFAMILY SSF53738 304 447 1.33E-31 T 15-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Trad_0749 a48644e169033f47f20cb8d4732fe6cd 548 SUPERFAMILY SSF53738 23 234 1.55E-50 T 15-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Trad_0749 a48644e169033f47f20cb8d4732fe6cd 548 Gene3D G3DSA:3.40.120.10 16 219 4.3E-72 T 15-10-2018 Trad_0749 a48644e169033f47f20cb8d4732fe6cd 548 Gene3D G3DSA:3.40.120.10 220 317 1.7E-44 T 15-10-2018 Trad_0749 a48644e169033f47f20cb8d4732fe6cd 548 SUPERFAMILY SSF55957 433 543 5.89E-21 T 15-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Trad_0749 a48644e169033f47f20cb8d4732fe6cd 548 Gene3D G3DSA:3.30.310.50 443 546 7.0E-36 T 15-10-2018 Trad_0749 a48644e169033f47f20cb8d4732fe6cd 548 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 38 178 4.9E-37 T 15-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Trad_0749 a48644e169033f47f20cb8d4732fe6cd 548 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 209 314 4.6E-17 T 15-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Trad_0749 a48644e169033f47f20cb8d4732fe6cd 548 TIGRFAM TIGR01132 pgm: phosphoglucomutase, alpha-D-glucose phosphate-specific 1 543 5.0E-284 T 15-10-2018 IPR005852 Phosphoglucomutase, alpha-D-glucose specific GO:0004614|GO:0005975 KEGG: 00010+5.4.2.2|KEGG: 00030+5.4.2.2|KEGG: 00052+5.4.2.2|KEGG: 00230+5.4.2.2|KEGG: 00500+5.4.2.2|KEGG: 00520+5.4.2.2|KEGG: 00521+5.4.2.2|MetaCyc: PWY-2723|MetaCyc: PWY-3801|MetaCyc: PWY-5384|MetaCyc: PWY-5661|MetaCyc: PWY-5940|MetaCyc: PWY-5941|MetaCyc: PWY-622|MetaCyc: PWY-6317|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-6981|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7900|MetaCyc: PWY-7902 Trad_0749 a48644e169033f47f20cb8d4732fe6cd 548 SUPERFAMILY SSF53738 208 314 1.0E-9 T 15-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Trad_0749 a48644e169033f47f20cb8d4732fe6cd 548 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 320 439 6.4E-27 T 15-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Trad_0749 a48644e169033f47f20cb8d4732fe6cd 548 Gene3D G3DSA:3.40.120.10 318 442 4.4E-35 T 15-10-2018 Trad_1782 b9c836c2893e7ee8d6472d85e9935d46 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 180 9.0E-12 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Trad_1782 b9c836c2893e7ee8d6472d85e9935d46 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 192 9.0E-12 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Trad_1782 b9c836c2893e7ee8d6472d85e9935d46 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 164 9.0E-12 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Trad_1782 b9c836c2893e7ee8d6472d85e9935d46 211 Gene3D G3DSA:3.40.50.12740 5 210 9.3E-64 T 15-10-2018 Trad_1782 b9c836c2893e7ee8d6472d85e9935d46 211 SMART SM00421 147 204 8.4E-22 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Trad_1782 b9c836c2893e7ee8d6472d85e9935d46 211 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 204 8.0E-19 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Trad_1782 b9c836c2893e7ee8d6472d85e9935d46 211 SMART SM00448 4 117 1.1E-31 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Trad_1782 b9c836c2893e7ee8d6472d85e9935d46 211 Pfam PF00072 Response regulator receiver domain 7 117 1.4E-25 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Trad_1782 b9c836c2893e7ee8d6472d85e9935d46 211 SUPERFAMILY SSF46894 143 210 1.12E-22 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Trad_1782 b9c836c2893e7ee8d6472d85e9935d46 211 SUPERFAMILY SSF52172 4 129 1.71E-32 T 15-10-2018 IPR011006 CheY-like superfamily Trad_1782 b9c836c2893e7ee8d6472d85e9935d46 211 ProSitePatterns PS00622 LuxR-type HTH domain signature. 164 191 - T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Trad_1639 674b525248b9e4ea2e3509f5aad4d418 307 Pfam PF08544 GHMP kinases C terminal 212 293 1.7E-12 T 15-10-2018 IPR013750 GHMP kinase, C-terminal domain Trad_1639 674b525248b9e4ea2e3509f5aad4d418 307 PRINTS PR00959 Mevalonate kinase family signature 75 97 1.4E-8 T 15-10-2018 Trad_1639 674b525248b9e4ea2e3509f5aad4d418 307 PRINTS PR00959 Mevalonate kinase family signature 117 136 1.4E-8 T 15-10-2018 Trad_1639 674b525248b9e4ea2e3509f5aad4d418 307 PRINTS PR00959 Mevalonate kinase family signature 261 278 1.4E-8 T 15-10-2018 Trad_1639 674b525248b9e4ea2e3509f5aad4d418 307 Gene3D G3DSA:3.30.230.120 20 306 6.9E-80 T 15-10-2018 Trad_1639 674b525248b9e4ea2e3509f5aad4d418 307 PIRSF PIRSF036406 62 306 5.6E-48 T 15-10-2018 IPR014606 D,D-heptose 7-phosphate kinase KEGG: 00540+2.7.1.168|MetaCyc: PWY-6478 Trad_1639 674b525248b9e4ea2e3509f5aad4d418 307 PIRSF PIRSF036406 20 73 1.6E-8 T 15-10-2018 IPR014606 D,D-heptose 7-phosphate kinase KEGG: 00540+2.7.1.168|MetaCyc: PWY-6478 Trad_1639 674b525248b9e4ea2e3509f5aad4d418 307 SUPERFAMILY SSF54211 19 146 4.78E-17 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Trad_1639 674b525248b9e4ea2e3509f5aad4d418 307 SUPERFAMILY SSF55060 162 300 2.01E-25 T 15-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily Trad_2096 8bf6d6ced5264793c173fd4df17d7e27 545 SUPERFAMILY SSF75005 21 336 1.24E-102 T 15-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily Trad_2096 8bf6d6ced5264793c173fd4df17d7e27 545 Gene3D G3DSA:2.60.120.200 341 544 7.4E-62 T 15-10-2018 Trad_2096 8bf6d6ced5264793c173fd4df17d7e27 545 Pfam PF04616 Glycosyl hydrolases family 43 21 314 6.6E-104 T 15-10-2018 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 Trad_2096 8bf6d6ced5264793c173fd4df17d7e27 545 SUPERFAMILY SSF49899 341 543 9.89E-61 T 15-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily Trad_2096 8bf6d6ced5264793c173fd4df17d7e27 545 Gene3D G3DSA:2.115.10.20 19 339 8.6E-103 T 15-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily Trad_1476 b05ce2b385a18c96ae7f1bb1e4ea1967 685 Pfam PF00990 Diguanylate cyclase, GGDEF domain 266 421 9.1E-49 T 15-10-2018 IPR000160 GGDEF domain Trad_1476 b05ce2b385a18c96ae7f1bb1e4ea1967 685 SMART SM00086 212 254 3.2E-8 T 15-10-2018 IPR001610 PAC motif Trad_1476 b05ce2b385a18c96ae7f1bb1e4ea1967 685 SMART SM00091 140 206 1.4E-5 T 15-10-2018 IPR000014 PAS domain Trad_1476 b05ce2b385a18c96ae7f1bb1e4ea1967 685 SMART SM00304 67 129 6.3E-4 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Trad_1476 b05ce2b385a18c96ae7f1bb1e4ea1967 685 SUPERFAMILY SSF141868 442 679 4.32E-81 T 15-10-2018 IPR035919 EAL domain superfamily Trad_1476 b05ce2b385a18c96ae7f1bb1e4ea1967 685 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 136 261 8.8E-19 T 15-10-2018 IPR000014 PAS domain Trad_1476 b05ce2b385a18c96ae7f1bb1e4ea1967 685 SMART SM00052 437 672 2.6E-98 T 15-10-2018 IPR001633 EAL domain Trad_1476 b05ce2b385a18c96ae7f1bb1e4ea1967 685 Gene3D G3DSA:3.30.70.270 264 440 3.9E-58 T 15-10-2018 Trad_1476 b05ce2b385a18c96ae7f1bb1e4ea1967 685 SUPERFAMILY SSF55073 270 429 1.26E-46 T 15-10-2018 IPR029787 Nucleotide cyclase Trad_1476 b05ce2b385a18c96ae7f1bb1e4ea1967 685 Gene3D G3DSA:3.20.20.450 441 681 3.7E-91 T 15-10-2018 IPR035919 EAL domain superfamily Trad_1476 b05ce2b385a18c96ae7f1bb1e4ea1967 685 Pfam PF00563 EAL domain 444 667 5.2E-70 T 15-10-2018 IPR001633 EAL domain Trad_1476 b05ce2b385a18c96ae7f1bb1e4ea1967 685 Gene3D G3DSA:3.30.450.20 137 263 2.5E-26 T 15-10-2018 Trad_1476 b05ce2b385a18c96ae7f1bb1e4ea1967 685 SMART SM00267 254 427 1.4E-63 T 15-10-2018 IPR000160 GGDEF domain Trad_1476 b05ce2b385a18c96ae7f1bb1e4ea1967 685 SUPERFAMILY SSF55785 125 252 1.34E-23 T 15-10-2018 IPR035965 PAS domain superfamily Trad_1476 b05ce2b385a18c96ae7f1bb1e4ea1967 685 Pfam PF08447 PAS fold 163 246 7.6E-15 T 15-10-2018 IPR013655 PAS fold-3 GO:0005515 Trad_1476 b05ce2b385a18c96ae7f1bb1e4ea1967 685 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 261 425 7.5E-40 T 15-10-2018 IPR000160 GGDEF domain Trad_1107 18a50023124e1d26af4ab55607545d69 393 Gene3D G3DSA:3.30.70.1070 41 109 4.5E-10 T 15-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 Trad_1107 18a50023124e1d26af4ab55607545d69 393 Pfam PF05036 Sporulation related domain 41 105 5.8E-14 T 15-10-2018 IPR007730 Sporulation-like domain GO:0042834 Trad_1107 18a50023124e1d26af4ab55607545d69 393 SUPERFAMILY SSF110997 41 105 8.76E-11 T 15-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 Trad_1957 dbaabd6e7c036a5e00b46366cc52a0a6 327 TIGRFAM TIGR03609 S_layer_CsaB: polysaccharide pyruvyl transferase CsaB 2 288 3.9E-72 T 15-10-2018 IPR019896 Polysaccharide pyruvyl transferase, CsaB Trad_1957 dbaabd6e7c036a5e00b46366cc52a0a6 327 Pfam PF04230 Polysaccharide pyruvyl transferase 13 269 1.4E-29 T 15-10-2018 IPR007345 Polysaccharide pyruvyl transferase Trad_2315 d312fa184626c8495cac0552211872f7 544 SUPERFAMILY SSF68912 130 175 9.02E-7 T 15-10-2018 IPR036269 Rho termination factor, N-terminal domain superfamily Trad_2315 d312fa184626c8495cac0552211872f7 544 SUPERFAMILY SSF52540 217 496 1.68E-65 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_2315 d312fa184626c8495cac0552211872f7 544 SMART SM00959 134 176 5.5E-7 T 15-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 Trad_2315 d312fa184626c8495cac0552211872f7 544 Gene3D G3DSA:2.40.50.140 129 255 7.6E-30 T 15-10-2018 Trad_2315 d312fa184626c8495cac0552211872f7 544 TIGRFAM TIGR00767 rho: transcription termination factor Rho 132 541 1.8E-173 T 15-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 Trad_2315 d312fa184626c8495cac0552211872f7 544 Hamap MF_01884 Transcription termination factor Rho [rho]. 130 544 179.345 T 15-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 Trad_2315 d312fa184626c8495cac0552211872f7 544 SMART SM00382 294 480 8.0E-9 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_2315 d312fa184626c8495cac0552211872f7 544 Gene3D G3DSA:3.40.50.300 258 542 6.3E-120 T 15-10-2018 Trad_2315 d312fa184626c8495cac0552211872f7 544 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 283 488 8.0E-21 T 15-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Trad_2315 d312fa184626c8495cac0552211872f7 544 SMART SM00357 181 245 7.7E-4 T 15-10-2018 IPR011129 Cold shock domain GO:0003676 Trad_2315 d312fa184626c8495cac0552211872f7 544 Pfam PF07497 Rho termination factor, RNA-binding domain 180 251 2.1E-22 T 15-10-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 Trad_2315 d312fa184626c8495cac0552211872f7 544 SUPERFAMILY SSF50249 180 251 3.51E-15 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold Trad_2315 d312fa184626c8495cac0552211872f7 544 Pfam PF07498 Rho termination factor, N-terminal domain 134 176 4.6E-8 T 15-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 Trad_1554 f00a3310906e7493fd59ccb04e52fe8d 750 TIGRFAM TIGR01736 FGAM_synth_II: phosphoribosylformylglycinamidine synthase II 21 747 5.6E-285 T 15-10-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 Trad_1554 f00a3310906e7493fd59ccb04e52fe8d 750 SUPERFAMILY SSF56042 208 431 2.09E-52 T 15-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Trad_1554 f00a3310906e7493fd59ccb04e52fe8d 750 Pfam PF02769 AIR synthase related protein, C-terminal domain 581 717 1.6E-20 T 15-10-2018 IPR010918 PurM-like, C-terminal domain Trad_1554 f00a3310906e7493fd59ccb04e52fe8d 750 Pfam PF02769 AIR synthase related protein, C-terminal domain 208 358 1.3E-32 T 15-10-2018 IPR010918 PurM-like, C-terminal domain Trad_1554 f00a3310906e7493fd59ccb04e52fe8d 750 SUPERFAMILY SSF55326 405 576 1.57E-56 T 15-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Trad_1554 f00a3310906e7493fd59ccb04e52fe8d 750 Gene3D G3DSA:3.90.650.10 576 750 7.1E-43 T 15-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Trad_1554 f00a3310906e7493fd59ccb04e52fe8d 750 Hamap MF_00420 Phosphoribosylformylglycinamidine synthase subunit PurL [purL]. 1 750 302.246 T 15-10-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 Trad_1554 f00a3310906e7493fd59ccb04e52fe8d 750 Gene3D G3DSA:3.30.1330.10 48 199 1.9E-128 T 15-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Trad_1554 f00a3310906e7493fd59ccb04e52fe8d 750 Pfam PF00586 AIR synthase related protein, N-terminal domain 447 567 1.1E-25 T 15-10-2018 IPR016188 PurM-like, N-terminal domain Trad_1554 f00a3310906e7493fd59ccb04e52fe8d 750 Pfam PF00586 AIR synthase related protein, N-terminal domain 90 195 2.0E-25 T 15-10-2018 IPR016188 PurM-like, N-terminal domain Trad_1554 f00a3310906e7493fd59ccb04e52fe8d 750 Gene3D G3DSA:3.90.650.10 32 363 1.9E-128 T 15-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Trad_1554 f00a3310906e7493fd59ccb04e52fe8d 750 Gene3D G3DSA:3.30.1330.10 386 570 1.1E-62 T 15-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Trad_1554 f00a3310906e7493fd59ccb04e52fe8d 750 PIRSF PIRSF001587 9 750 8.0E-299 T 15-10-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 Trad_1554 f00a3310906e7493fd59ccb04e52fe8d 750 SUPERFAMILY SSF55326 17 199 1.06E-48 T 15-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Trad_1554 f00a3310906e7493fd59ccb04e52fe8d 750 SUPERFAMILY SSF56042 579 745 8.22E-39 T 15-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Trad_0797 fda551794b566645864ffcb83f07c29e 147 PIRSF PIRSF029477 1 147 2.7E-40 T 15-10-2018 IPR016920 Uncharacterised conserved protein UCP029477 Trad_0797 fda551794b566645864ffcb83f07c29e 147 Pfam PF09537 Domain of unknown function (DUF2383) 6 115 1.4E-33 T 15-10-2018 IPR019052 Domain of unknown function DUF2383 Trad_0797 fda551794b566645864ffcb83f07c29e 147 Gene3D G3DSA:1.20.1260.10 1 146 3.9E-46 T 15-10-2018 IPR012347 Ferritin-like Trad_0797 fda551794b566645864ffcb83f07c29e 147 SUPERFAMILY SSF47240 3 117 3.58E-7 T 15-10-2018 IPR009078 Ferritin-like superfamily Trad_0797 fda551794b566645864ffcb83f07c29e 147 TIGRFAM TIGR02284 TIGR02284: conserved hypothetical protein 8 142 6.4E-33 T 15-10-2018 IPR011971 Conserved hypothetical protein CHP02284 Trad_0299 e8b3296f53a1d9feced92cd347956d63 408 SMART SM00862 231 296 8.7E-4 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Trad_0299 e8b3296f53a1d9feced92cd347956d63 408 Gene3D G3DSA:3.30.450.40 12 197 2.6E-44 T 15-10-2018 IPR029016 GAF-like domain superfamily Trad_0299 e8b3296f53a1d9feced92cd347956d63 408 Gene3D G3DSA:1.10.10.10 212 302 1.8E-6 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Trad_0299 e8b3296f53a1d9feced92cd347956d63 408 SUPERFAMILY SSF46894 229 297 2.83E-5 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Trad_2722 ccf35fcd1704bfa61ffa95d7ce684d88 278 SUPERFAMILY SSF52540 8 275 3.07E-52 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_2722 ccf35fcd1704bfa61ffa95d7ce684d88 278 Pfam PF13469 Sulfotransferase family 17 223 7.0E-18 T 15-10-2018 Trad_2722 ccf35fcd1704bfa61ffa95d7ce684d88 278 Gene3D G3DSA:3.40.50.300 10 277 1.9E-56 T 15-10-2018 Trad_1442 62879e536848144a6338ba16e54f860d 504 SUPERFAMILY SSF51445 25 427 5.28E-132 T 15-10-2018 IPR017853 Glycoside hydrolase superfamily Trad_1442 62879e536848144a6338ba16e54f860d 504 Gene3D G3DSA:3.20.20.80 26 423 3.1E-147 T 15-10-2018 Trad_1442 62879e536848144a6338ba16e54f860d 504 SUPERFAMILY SSF51011 430 486 2.45E-5 T 15-10-2018 Trad_1442 62879e536848144a6338ba16e54f860d 504 Gene3D G3DSA:3.90.400.10 120 179 3.1E-147 T 15-10-2018 Trad_1442 62879e536848144a6338ba16e54f860d 504 Pfam PF00128 Alpha amylase, catalytic domain 46 360 6.1E-84 T 15-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Trad_1442 62879e536848144a6338ba16e54f860d 504 PRINTS PR00110 Alpha-amylase signature 109 120 2.2E-5 T 15-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 Trad_1442 62879e536848144a6338ba16e54f860d 504 PRINTS PR00110 Alpha-amylase signature 201 212 2.2E-5 T 15-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 Trad_1442 62879e536848144a6338ba16e54f860d 504 PRINTS PR00110 Alpha-amylase signature 305 317 2.2E-5 T 15-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 Trad_1442 62879e536848144a6338ba16e54f860d 504 SMART SM00642 31 421 1.7E-119 T 15-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Trad_1442 62879e536848144a6338ba16e54f860d 504 Pfam PF11941 Domain of unknown function (DUF3459) 413 497 2.4E-8 T 15-10-2018 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) Trad_1388 7c22551dc089fb9cae663b242124071f 383 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 13 29 - T 15-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Trad_1388 7c22551dc089fb9cae663b242124071f 383 Gene3D G3DSA:3.20.20.70 4 270 3.1E-91 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Trad_1388 7c22551dc089fb9cae663b242124071f 383 Gene3D G3DSA:1.10.238.260 271 382 2.8E-30 T 15-10-2018 Trad_1388 7c22551dc089fb9cae663b242124071f 383 TIGRFAM TIGR02146 LysS_fung_arch: homocitrate synthase 8 353 1.2E-138 T 15-10-2018 IPR011872 Homocitrate synthase, fungi/archaea GO:0004410|GO:0019752|GO:0019878|GO:0046912 KEGG: 00300+2.3.3.14|KEGG: 00620+2.3.3.14|MetaCyc: PWY-3081|MetaCyc: PWY-7710 Trad_1388 7c22551dc089fb9cae663b242124071f 383 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 191 204 - T 15-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Trad_1388 7c22551dc089fb9cae663b242124071f 383 SUPERFAMILY SSF51569 3 281 1.08E-66 T 15-10-2018 Trad_1388 7c22551dc089fb9cae663b242124071f 383 Pfam PF00682 HMGL-like 8 264 7.9E-69 T 15-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 Trad_2000 d2d13dbb4fee6b9aa342ba20fc9b8765 252 Gene3D G3DSA:3.40.50.720 1 252 1.0E-75 T 15-10-2018 Trad_2000 d2d13dbb4fee6b9aa342ba20fc9b8765 252 SUPERFAMILY SSF51735 3 251 2.51E-71 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_2000 d2d13dbb4fee6b9aa342ba20fc9b8765 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 134 162 - T 15-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Trad_2000 d2d13dbb4fee6b9aa342ba20fc9b8765 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 74 85 1.2E-35 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2000 d2d13dbb4fee6b9aa342ba20fc9b8765 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 213 233 1.2E-35 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2000 d2d13dbb4fee6b9aa342ba20fc9b8765 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 185 1.2E-35 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2000 d2d13dbb4fee6b9aa342ba20fc9b8765 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 121 137 1.2E-35 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2000 d2d13dbb4fee6b9aa342ba20fc9b8765 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 166 1.2E-35 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2000 d2d13dbb4fee6b9aa342ba20fc9b8765 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 1.2E-35 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2000 d2d13dbb4fee6b9aa342ba20fc9b8765 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 250 5.7E-54 T 15-10-2018 Trad_2000 d2d13dbb4fee6b9aa342ba20fc9b8765 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 74 85 2.8E-10 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2000 d2d13dbb4fee6b9aa342ba20fc9b8765 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 127 135 2.8E-10 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2000 d2d13dbb4fee6b9aa342ba20fc9b8765 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 166 2.8E-10 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2211 9ca05aba45a50f86dfd93d5a482b5578 393 SUPERFAMILY SSF53383 9 390 4.26E-105 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Trad_2211 9ca05aba45a50f86dfd93d5a482b5578 393 Gene3D G3DSA:3.90.1150.10 19 383 3.3E-143 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Trad_2211 9ca05aba45a50f86dfd93d5a482b5578 393 Gene3D G3DSA:3.40.640.10 47 285 3.3E-143 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Trad_2211 9ca05aba45a50f86dfd93d5a482b5578 393 Pfam PF00155 Aminotransferase class I and II 34 383 9.9E-63 T 15-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Trad_2086 6bb96ac49315088876520093ca03cfab 221 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 71 86 - T 15-10-2018 IPR020605 Octanoyltransferase, conserved site GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 Trad_2086 6bb96ac49315088876520093ca03cfab 221 Pfam PF03099 Biotin/lipoate A/B protein ligase family 59 156 1.0E-5 T 15-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 Trad_2086 6bb96ac49315088876520093ca03cfab 221 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 75 115 3.0E-9 T 15-10-2018 Trad_2086 6bb96ac49315088876520093ca03cfab 221 PIRSF PIRSF016262 1 211 1.3E-55 T 15-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 Trad_2086 6bb96ac49315088876520093ca03cfab 221 SUPERFAMILY SSF55681 2 204 6.79E-61 T 15-10-2018 Trad_2086 6bb96ac49315088876520093ca03cfab 221 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 25 201 2.2E-46 T 15-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 Trad_2086 6bb96ac49315088876520093ca03cfab 221 Hamap MF_00013 Octanoyltransferase [lipB]. 1 204 32.474 T 15-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 Trad_2086 6bb96ac49315088876520093ca03cfab 221 Gene3D G3DSA:3.30.930.10 1 202 6.8E-76 T 15-10-2018 Trad_2949 96e55b8965b42015f87df80dba00f023 642 Gene3D G3DSA:3.40.50.12780 27 334 2.9E-42 T 15-10-2018 Trad_2949 96e55b8965b42015f87df80dba00f023 642 Gene3D G3DSA:3.40.50.12780 338 498 1.7E-40 T 15-10-2018 Trad_2949 96e55b8965b42015f87df80dba00f023 642 SUPERFAMILY SSF56801 33 616 5.49E-111 T 15-10-2018 Trad_2949 96e55b8965b42015f87df80dba00f023 642 ProSitePatterns PS00455 Putative AMP-binding domain signature. 223 234 - T 15-10-2018 IPR020845 AMP-binding, conserved site Trad_2949 96e55b8965b42015f87df80dba00f023 642 Pfam PF00501 AMP-binding enzyme 40 504 2.4E-89 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Trad_2949 96e55b8965b42015f87df80dba00f023 642 PRINTS PR00154 AMP-binding signature 230 238 2.5E-5 T 15-10-2018 IPR020459 AMP-binding Trad_2949 96e55b8965b42015f87df80dba00f023 642 PRINTS PR00154 AMP-binding signature 218 229 2.5E-5 T 15-10-2018 IPR020459 AMP-binding Trad_2569 ca5b53b98f1486c31eb712c136b49b88 437 ProSitePatterns PS00622 LuxR-type HTH domain signature. 387 414 - T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Trad_2569 ca5b53b98f1486c31eb712c136b49b88 437 SUPERFAMILY SSF46894 362 428 3.74E-15 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Trad_2569 ca5b53b98f1486c31eb712c136b49b88 437 Gene3D G3DSA:3.30.70.270 121 259 1.3E-6 T 15-10-2018 Trad_2569 ca5b53b98f1486c31eb712c136b49b88 437 Gene3D G3DSA:3.40.50.12740 305 430 2.3E-17 T 15-10-2018 Trad_2569 ca5b53b98f1486c31eb712c136b49b88 437 Pfam PF00196 Bacterial regulatory proteins, luxR family 373 424 6.1E-14 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Trad_2569 ca5b53b98f1486c31eb712c136b49b88 437 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 373 387 8.7E-9 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Trad_2569 ca5b53b98f1486c31eb712c136b49b88 437 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 387 403 8.7E-9 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Trad_2569 ca5b53b98f1486c31eb712c136b49b88 437 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 403 415 8.7E-9 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Trad_2569 ca5b53b98f1486c31eb712c136b49b88 437 SMART SM00267 120 281 2.3E-4 T 15-10-2018 IPR000160 GGDEF domain Trad_2569 ca5b53b98f1486c31eb712c136b49b88 437 SMART SM00421 370 427 2.2E-14 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Trad_0028 8ef29eec94173e3101754bb1f523e8b4 120 Pfam PF02410 Ribosomal silencing factor during starvation 7 101 2.5E-26 T 15-10-2018 Trad_0028 8ef29eec94173e3101754bb1f523e8b4 120 Gene3D G3DSA:3.30.460.10 2 112 2.5E-34 T 15-10-2018 Trad_0028 8ef29eec94173e3101754bb1f523e8b4 120 SUPERFAMILY SSF81301 3 110 2.29E-34 T 15-10-2018 Trad_0028 8ef29eec94173e3101754bb1f523e8b4 120 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 1 102 24.333 T 15-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS Trad_0028 8ef29eec94173e3101754bb1f523e8b4 120 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 5 101 3.2E-33 T 15-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS Trad_1977 2b60997e5cb1ac1e68c29a145eea075c 305 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 295 3.1E-21 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Trad_1977 2b60997e5cb1ac1e68c29a145eea075c 305 Gene3D G3DSA:1.10.3720.10 18 293 7.3E-63 T 15-10-2018 IPR035906 MetI-like superfamily Trad_1977 2b60997e5cb1ac1e68c29a145eea075c 305 SUPERFAMILY SSF161098 19 305 1.83E-64 T 15-10-2018 IPR035906 MetI-like superfamily Trad_2099 c29c3bf80b59766f2a366ba3c7798d85 439 Gene3D G3DSA:3.20.20.80 98 336 5.8E-35 T 15-10-2018 Trad_2099 c29c3bf80b59766f2a366ba3c7798d85 439 SUPERFAMILY SSF51445 66 334 7.04E-33 T 15-10-2018 IPR017853 Glycoside hydrolase superfamily Trad_0123 b39aee4c63cc5d2e49837eb57b9658dc 227 Gene3D G3DSA:3.40.630.30 16 213 8.0E-37 T 15-10-2018 Trad_0123 b39aee4c63cc5d2e49837eb57b9658dc 227 Pfam PF00583 Acetyltransferase (GNAT) family 28 131 6.5E-6 T 15-10-2018 IPR000182 GNAT domain Trad_0123 b39aee4c63cc5d2e49837eb57b9658dc 227 SUPERFAMILY SSF55729 2 137 2.03E-12 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase Trad_1306 33280009ead92bac267168768d9bbcbf 180 SUPERFAMILY SSF55144 10 178 1.6E-18 T 15-10-2018 IPR009097 Cyclic phosphodiesterase Trad_1306 33280009ead92bac267168768d9bbcbf 180 Pfam PF13563 2'-5' RNA ligase superfamily 13 163 4.9E-37 T 15-10-2018 Trad_1306 33280009ead92bac267168768d9bbcbf 180 Gene3D G3DSA:3.90.1140.10 6 179 1.4E-38 T 15-10-2018 Trad_0227 87e1b526935f230e625147a8e9e14e16 320 PRINTS PR00151 Porphobilinogen deaminase signature 143 160 1.6E-23 T 15-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Trad_0227 87e1b526935f230e625147a8e9e14e16 320 PRINTS PR00151 Porphobilinogen deaminase signature 90 109 1.6E-23 T 15-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Trad_0227 87e1b526935f230e625147a8e9e14e16 320 PRINTS PR00151 Porphobilinogen deaminase signature 251 268 1.6E-23 T 15-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Trad_0227 87e1b526935f230e625147a8e9e14e16 320 PRINTS PR00151 Porphobilinogen deaminase signature 162 179 1.6E-23 T 15-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Trad_0227 87e1b526935f230e625147a8e9e14e16 320 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 247 282 1.2E-6 T 15-10-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Trad_0227 87e1b526935f230e625147a8e9e14e16 320 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 20 233 4.6E-66 T 15-10-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Trad_0227 87e1b526935f230e625147a8e9e14e16 320 SUPERFAMILY SSF54782 243 286 9.55E-10 T 15-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Trad_0227 87e1b526935f230e625147a8e9e14e16 320 PIRSF PIRSF001438 7 316 6.7E-88 T 15-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Trad_0227 87e1b526935f230e625147a8e9e14e16 320 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 19 318 32.447 T 15-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Trad_0227 87e1b526935f230e625147a8e9e14e16 320 SUPERFAMILY SSF53850 20 239 1.52E-62 T 15-10-2018 Trad_0227 87e1b526935f230e625147a8e9e14e16 320 Gene3D G3DSA:3.40.190.10 20 237 1.6E-68 T 15-10-2018 Trad_0227 87e1b526935f230e625147a8e9e14e16 320 Gene3D G3DSA:3.30.160.40 241 314 1.3E-7 T 15-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Trad_0227 87e1b526935f230e625147a8e9e14e16 320 Gene3D G3DSA:3.40.190.10 114 220 1.6E-68 T 15-10-2018 Trad_0227 87e1b526935f230e625147a8e9e14e16 320 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 20 292 2.6E-83 T 15-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Trad_1662 5bd9da9741f5340b19c35c23ad99d19c 299 Pfam PF05107 CRISPR-associated protein Cas7 13 283 2.8E-102 T 15-10-2018 IPR006482 CRISPR-associated protein Cas7, subtype I-B/I-C Trad_1662 5bd9da9741f5340b19c35c23ad99d19c 299 TIGRFAM TIGR01595 cas_CT1132: CRISPR-associated protein, CT1132 family 12 283 1.9E-71 T 15-10-2018 IPR006482 CRISPR-associated protein Cas7, subtype I-B/I-C Trad_1662 5bd9da9741f5340b19c35c23ad99d19c 299 TIGRFAM TIGR02589 cas_Csd2: CRISPR-associated protein Cas7/Csd2, subtype I-C/DVULG 14 295 8.6E-103 T 15-10-2018 IPR013418 CRISPR-associated protein Csd2 Trad_1792 e57b3c735647b7b0bf508cb6721044cd 142 Pfam PF14242 Domain of unknown function (DUF4342) 51 131 4.9E-25 T 15-10-2018 IPR025642 Domain of unknown function DUF4342 Trad_1409 3d7f0689cb801f8b65de426cab1de712 146 Pfam PF13411 MerR HTH family regulatory protein 28 95 2.3E-16 T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Trad_1409 3d7f0689cb801f8b65de426cab1de712 146 SUPERFAMILY SSF46955 28 118 3.94E-19 T 15-10-2018 IPR009061 Putative DNA-binding domain superfamily Trad_1409 3d7f0689cb801f8b65de426cab1de712 146 Gene3D G3DSA:1.10.1660.10 27 132 6.9E-23 T 15-10-2018 Trad_1409 3d7f0689cb801f8b65de426cab1de712 146 SMART SM00422 28 97 4.3E-26 T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Trad_0705 18bd69568813a941fba0c832e1130ebd 311 Gene3D G3DSA:2.60.120.580 1 121 9.0E-24 T 15-10-2018 Trad_0705 18bd69568813a941fba0c832e1130ebd 311 Gene3D G3DSA:2.60.120.580 122 219 6.8E-32 T 15-10-2018 Trad_0705 18bd69568813a941fba0c832e1130ebd 311 Pfam PF03069 Acetamidase/Formamidase family 10 148 2.9E-28 T 15-10-2018 IPR004304 Acetamidase/Formamidase GO:0016811 Trad_0705 18bd69568813a941fba0c832e1130ebd 311 Pfam PF03069 Acetamidase/Formamidase family 153 310 1.9E-41 T 15-10-2018 IPR004304 Acetamidase/Formamidase GO:0016811 Trad_0705 18bd69568813a941fba0c832e1130ebd 311 SUPERFAMILY SSF141130 8 310 4.84E-97 T 15-10-2018 Trad_0705 18bd69568813a941fba0c832e1130ebd 311 Gene3D G3DSA:3.10.28.20 233 311 1.4E-14 T 15-10-2018 Trad_1038 0f2d245039e38a7d52442c2764fee1d6 206 Gene3D G3DSA:2.40.30.10 123 205 7.2E-14 T 15-10-2018 Trad_1038 0f2d245039e38a7d52442c2764fee1d6 206 SUPERFAMILY SSF50447 2 202 7.68E-74 T 15-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Trad_1038 0f2d245039e38a7d52442c2764fee1d6 206 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 1 202 36.525 T 15-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_1038 0f2d245039e38a7d52442c2764fee1d6 206 Pfam PF00297 Ribosomal protein L3 91 176 2.2E-15 T 15-10-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Trad_1038 0f2d245039e38a7d52442c2764fee1d6 206 ProSitePatterns PS00474 Ribosomal protein L3 signature. 96 119 - T 15-10-2018 IPR019926 Ribosomal protein L3, conserved site Trad_1038 0f2d245039e38a7d52442c2764fee1d6 206 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 3 199 1.4E-80 T 15-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_1038 0f2d245039e38a7d52442c2764fee1d6 206 Gene3D G3DSA:2.40.50.620 30 88 2.1E-16 T 15-10-2018 Trad_2093 870778f4f72f67e0dbc47705ffd5af43 386 Hamap MF_00455 Xylose isomerase [xylA]. 1 382 34.033 T 15-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 Trad_2093 870778f4f72f67e0dbc47705ffd5af43 386 Gene3D G3DSA:3.20.20.150 3 386 1.9E-125 T 15-10-2018 Trad_2093 870778f4f72f67e0dbc47705ffd5af43 386 TIGRFAM TIGR02631 xylA_Arthro: xylose isomerase 5 383 1.8E-180 T 15-10-2018 IPR013453 Xylose isomerase, actinobacteria GO:0009045|GO:0042732 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 Trad_2093 870778f4f72f67e0dbc47705ffd5af43 386 PRINTS PR00688 Xylose isomerase signature 281 292 3.6E-58 T 15-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 Trad_2093 870778f4f72f67e0dbc47705ffd5af43 386 PRINTS PR00688 Xylose isomerase signature 105 124 3.6E-58 T 15-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 Trad_2093 870778f4f72f67e0dbc47705ffd5af43 386 PRINTS PR00688 Xylose isomerase signature 220 247 3.6E-58 T 15-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 Trad_2093 870778f4f72f67e0dbc47705ffd5af43 386 PRINTS PR00688 Xylose isomerase signature 45 67 3.6E-58 T 15-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 Trad_2093 870778f4f72f67e0dbc47705ffd5af43 386 PRINTS PR00688 Xylose isomerase signature 82 102 3.6E-58 T 15-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 Trad_2093 870778f4f72f67e0dbc47705ffd5af43 386 PRINTS PR00688 Xylose isomerase signature 178 202 3.6E-58 T 15-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 Trad_2093 870778f4f72f67e0dbc47705ffd5af43 386 PRINTS PR00688 Xylose isomerase signature 156 175 3.6E-58 T 15-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 Trad_2093 870778f4f72f67e0dbc47705ffd5af43 386 PRINTS PR00688 Xylose isomerase signature 129 150 3.6E-58 T 15-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 Trad_2093 870778f4f72f67e0dbc47705ffd5af43 386 SUPERFAMILY SSF51658 4 385 6.91E-103 T 15-10-2018 IPR036237 Xylose isomerase-like superfamily Trad_2093 870778f4f72f67e0dbc47705ffd5af43 386 Pfam PF01261 Xylose isomerase-like TIM barrel 40 251 1.9E-19 T 15-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain Trad_0134 7b541642e86a255a92a735f493fb9ad0 385 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 9 384 3.0E-94 T 15-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Trad_0134 7b541642e86a255a92a735f493fb9ad0 385 Gene3D G3DSA:2.40.37.10 10 381 8.9E-104 T 15-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Trad_0134 7b541642e86a255a92a735f493fb9ad0 385 Gene3D G3DSA:3.20.20.10 25 249 8.9E-104 T 15-10-2018 IPR029066 PLP-binding barrel Trad_0134 7b541642e86a255a92a735f493fb9ad0 385 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 6 385 33.764 T 15-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Trad_0134 7b541642e86a255a92a735f493fb9ad0 385 SUPERFAMILY SSF51419 18 256 1.6E-52 T 15-10-2018 IPR029066 PLP-binding barrel Trad_0134 7b541642e86a255a92a735f493fb9ad0 385 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 26 254 1.5E-27 T 15-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Trad_0134 7b541642e86a255a92a735f493fb9ad0 385 SUPERFAMILY SSF50621 232 384 2.3E-45 T 15-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Trad_0134 7b541642e86a255a92a735f493fb9ad0 385 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 21 342 4.9E-20 T 15-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Trad_0134 7b541642e86a255a92a735f493fb9ad0 385 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 46 64 - T 15-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site Trad_0134 7b541642e86a255a92a735f493fb9ad0 385 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 244 263 3.6E-20 T 15-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Trad_0134 7b541642e86a255a92a735f493fb9ad0 385 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 46 64 3.6E-20 T 15-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Trad_0134 7b541642e86a255a92a735f493fb9ad0 385 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 66 78 3.6E-20 T 15-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Trad_0134 7b541642e86a255a92a735f493fb9ad0 385 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 342 355 3.6E-20 T 15-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Trad_0134 7b541642e86a255a92a735f493fb9ad0 385 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 172 185 3.6E-20 T 15-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Trad_0134 7b541642e86a255a92a735f493fb9ad0 385 PRINTS PR01181 Diaminopimelate decarboxylase signature 352 374 1.7E-21 T 15-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Trad_0134 7b541642e86a255a92a735f493fb9ad0 385 PRINTS PR01181 Diaminopimelate decarboxylase signature 64 81 1.7E-21 T 15-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Trad_0134 7b541642e86a255a92a735f493fb9ad0 385 PRINTS PR01181 Diaminopimelate decarboxylase signature 271 289 1.7E-21 T 15-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Trad_0134 7b541642e86a255a92a735f493fb9ad0 385 PRINTS PR01181 Diaminopimelate decarboxylase signature 150 159 1.7E-21 T 15-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Trad_2075 bc57c97f3bc6753661777c5c8b032646 602 SUPERFAMILY SSF54980 395 508 4.75E-28 T 15-10-2018 IPR035647 EF-G domain III/V-like Trad_2075 bc57c97f3bc6753661777c5c8b032646 602 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 3 594 9.6E-282 T 15-10-2018 IPR006298 GTP-binding protein TypA GO:0005525 Trad_2075 bc57c97f3bc6753661777c5c8b032646 602 PRINTS PR00315 GTP-binding elongation factor signature 5 18 8.2E-15 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Trad_2075 bc57c97f3bc6753661777c5c8b032646 602 PRINTS PR00315 GTP-binding elongation factor signature 85 96 8.2E-15 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Trad_2075 bc57c97f3bc6753661777c5c8b032646 602 PRINTS PR00315 GTP-binding elongation factor signature 49 57 8.2E-15 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Trad_2075 bc57c97f3bc6753661777c5c8b032646 602 PRINTS PR00315 GTP-binding elongation factor signature 121 130 8.2E-15 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Trad_2075 bc57c97f3bc6753661777c5c8b032646 602 PRINTS PR00315 GTP-binding elongation factor signature 69 79 8.2E-15 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Trad_2075 bc57c97f3bc6753661777c5c8b032646 602 SUPERFAMILY SSF52540 3 204 1.04E-53 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_2075 bc57c97f3bc6753661777c5c8b032646 602 Pfam PF03144 Elongation factor Tu domain 2 217 287 8.4E-12 T 15-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 Trad_2075 bc57c97f3bc6753661777c5c8b032646 602 SUPERFAMILY SSF54980 300 384 3.6E-14 T 15-10-2018 IPR035647 EF-G domain III/V-like Trad_2075 bc57c97f3bc6753661777c5c8b032646 602 Gene3D G3DSA:3.30.70.870 304 585 8.2E-125 T 15-10-2018 Trad_2075 bc57c97f3bc6753661777c5c8b032646 602 SUPERFAMILY SSF50447 150 296 6.45E-32 T 15-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Trad_2075 bc57c97f3bc6753661777c5c8b032646 602 Gene3D G3DSA:3.40.50.300 2 195 2.6E-62 T 15-10-2018 Trad_2075 bc57c97f3bc6753661777c5c8b032646 602 Pfam PF00679 Elongation factor G C-terminus 392 473 1.6E-22 T 15-10-2018 IPR000640 Elongation factor EFG, domain V-like Trad_2075 bc57c97f3bc6753661777c5c8b032646 602 Gene3D G3DSA:2.40.50.250 478 594 8.2E-125 T 15-10-2018 Trad_2075 bc57c97f3bc6753661777c5c8b032646 602 SMART SM00838 392 479 2.3E-10 T 15-10-2018 IPR000640 Elongation factor EFG, domain V-like Trad_2075 bc57c97f3bc6753661777c5c8b032646 602 Gene3D G3DSA:3.30.70.240 386 477 8.2E-125 T 15-10-2018 Trad_2075 bc57c97f3bc6753661777c5c8b032646 602 Pfam PF00009 Elongation factor Tu GTP binding domain 3 193 4.7E-52 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Trad_2075 bc57c97f3bc6753661777c5c8b032646 602 Gene3D G3DSA:2.40.30.10 197 297 1.9E-33 T 15-10-2018 Trad_2075 bc57c97f3bc6753661777c5c8b032646 602 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 2 134 6.0E-24 T 15-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Trad_2075 bc57c97f3bc6753661777c5c8b032646 602 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 42 57 - T 15-10-2018 IPR031157 Tr-type G domain, conserved site Trad_2795 fef431d8d652e0bb600e9d3dfb224ee7 410 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 2 244 2.4E-56 T 15-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal Trad_2795 fef431d8d652e0bb600e9d3dfb224ee7 410 SUPERFAMILY SSF53901 1 249 1.83E-75 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 Trad_2795 fef431d8d652e0bb600e9d3dfb224ee7 410 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 152 168 - T 15-10-2018 IPR018201 Beta-ketoacyl synthase, active site Trad_2795 fef431d8d652e0bb600e9d3dfb224ee7 410 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 252 366 1.4E-36 T 15-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal Trad_2795 fef431d8d652e0bb600e9d3dfb224ee7 410 SUPERFAMILY SSF53901 211 409 6.47E-73 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 Trad_2795 fef431d8d652e0bb600e9d3dfb224ee7 410 Gene3D G3DSA:3.40.47.10 1 252 4.2E-88 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 Trad_2795 fef431d8d652e0bb600e9d3dfb224ee7 410 SMART SM00825 Beta-ketoacyl synthase 4 409 1.3E-15 T 15-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Trad_2795 fef431d8d652e0bb600e9d3dfb224ee7 410 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 2 407 5.7E-178 T 15-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 Trad_2795 fef431d8d652e0bb600e9d3dfb224ee7 410 PIRSF PIRSF000447 1 410 9.3E-173 T 15-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 Trad_2795 fef431d8d652e0bb600e9d3dfb224ee7 410 Gene3D G3DSA:3.40.47.10 254 398 1.4E-50 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 Trad_2364 3e6c9530f5808e97ddd0486afda5c9b1 281 SUPERFAMILY SSF52151 2 272 1.33E-46 T 15-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Trad_2364 3e6c9530f5808e97ddd0486afda5c9b1 281 Pfam PF01734 Patatin-like phospholipase 5 158 1.2E-21 T 15-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 Trad_2364 3e6c9530f5808e97ddd0486afda5c9b1 281 Gene3D G3DSA:3.40.1090.10 85 183 1.6E-19 T 15-10-2018 Trad_2364 3e6c9530f5808e97ddd0486afda5c9b1 281 Gene3D G3DSA:3.40.1090.10 1 84 5.9E-20 T 15-10-2018 Trad_1659 493548c0238e0a5c8bc2d04a67ac90ee 772 SUPERFAMILY SSF52540 259 571 1.49E-30 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_1659 493548c0238e0a5c8bc2d04a67ac90ee 772 SUPERFAMILY SSF109604 44 189 1.47E-5 T 15-10-2018 Trad_1659 493548c0238e0a5c8bc2d04a67ac90ee 772 Pfam PF00270 DEAD/DEAH box helicase 261 422 1.6E-11 T 15-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Trad_1659 493548c0238e0a5c8bc2d04a67ac90ee 772 Pfam PF01966 HD domain 34 122 1.1E-4 T 15-10-2018 IPR006674 HD domain Trad_1659 493548c0238e0a5c8bc2d04a67ac90ee 772 Gene3D G3DSA:3.40.50.300 464 585 7.5E-8 T 15-10-2018 Trad_1659 493548c0238e0a5c8bc2d04a67ac90ee 772 TIGRFAM TIGR01596 cas3_HD: CRISPR-associated endonuclease Cas3-HD 19 190 1.4E-23 T 15-10-2018 IPR006483 CRISPR-associated Cas3-type HD domain Trad_1659 493548c0238e0a5c8bc2d04a67ac90ee 772 Gene3D G3DSA:1.10.3210.30 1 235 4.1E-13 T 15-10-2018 IPR038257 CRISPR-associated Cas3-type HD domain superfamily Trad_1659 493548c0238e0a5c8bc2d04a67ac90ee 772 SMART SM00487 233 456 1.5E-11 T 15-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Trad_1659 493548c0238e0a5c8bc2d04a67ac90ee 772 Gene3D G3DSA:3.40.50.300 238 432 3.2E-17 T 15-10-2018 Trad_2621 f7e11d6cc05d3d9d4e195ac390b9521c 198 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 114 171 8.0E-5 T 15-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 Trad_2621 f7e11d6cc05d3d9d4e195ac390b9521c 198 Gene3D G3DSA:3.30.300.130 101 186 2.7E-22 T 15-10-2018 IPR034904 Fe-S cluster assembly domain superfamily Trad_2621 f7e11d6cc05d3d9d4e195ac390b9521c 198 SUPERFAMILY SSF117916 97 178 1.31E-21 T 15-10-2018 IPR034904 Fe-S cluster assembly domain superfamily Trad_2621 f7e11d6cc05d3d9d4e195ac390b9521c 198 SUPERFAMILY SSF89360 1 95 7.06E-12 T 15-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 Trad_2621 f7e11d6cc05d3d9d4e195ac390b9521c 198 Gene3D G3DSA:2.60.300.12 2 97 6.2E-9 T 15-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 Trad_2621 f7e11d6cc05d3d9d4e195ac390b9521c 198 Pfam PF01106 NifU-like domain 106 171 3.1E-20 T 15-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 Trad_2912 3e021fe06fb1f11beedec75c61120325 586 Gene3D G3DSA:3.40.190.10 217 329 3.4E-19 T 15-10-2018 Trad_2912 3e021fe06fb1f11beedec75c61120325 586 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 72 505 8.2E-69 T 15-10-2018 IPR000914 Solute-binding protein family 5 domain Trad_2912 3e021fe06fb1f11beedec75c61120325 586 Gene3D G3DSA:3.90.76.10 36 206 1.0E-37 T 15-10-2018 Trad_2912 3e021fe06fb1f11beedec75c61120325 586 PIRSF PIRSF002741 7 586 1.4E-69 T 15-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Trad_2912 3e021fe06fb1f11beedec75c61120325 586 SUPERFAMILY SSF53850 25 581 1.55E-97 T 15-10-2018 Trad_2912 3e021fe06fb1f11beedec75c61120325 586 Gene3D G3DSA:3.10.105.10 349 553 4.0E-40 T 15-10-2018 Trad_2912 3e021fe06fb1f11beedec75c61120325 586 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 77 99 - T 15-10-2018 IPR023765 Solute-binding protein family 5, conserved site Trad_0736 8d856f191786a87cb39dfde950a4e2c9 398 Pfam PF00534 Glycosyl transferases group 1 198 350 3.4E-32 T 15-10-2018 IPR001296 Glycosyl transferase, family 1 Trad_0736 8d856f191786a87cb39dfde950a4e2c9 398 Gene3D G3DSA:3.40.50.2000 22 364 9.6E-65 T 15-10-2018 Trad_0736 8d856f191786a87cb39dfde950a4e2c9 398 Gene3D G3DSA:3.40.50.2000 178 355 9.6E-65 T 15-10-2018 Trad_0736 8d856f191786a87cb39dfde950a4e2c9 398 SUPERFAMILY SSF53756 14 368 1.32E-78 T 15-10-2018 Trad_0736 8d856f191786a87cb39dfde950a4e2c9 398 Pfam PF13439 Glycosyltransferase Family 4 22 181 1.3E-18 T 15-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Trad_0853 8b4fd9115fc9e3423098a0e8543eee4e 388 PRINTS PR00959 Mevalonate kinase family signature 29 53 2.2E-41 T 15-10-2018 Trad_0853 8b4fd9115fc9e3423098a0e8543eee4e 388 PRINTS PR00959 Mevalonate kinase family signature 162 181 2.2E-41 T 15-10-2018 Trad_0853 8b4fd9115fc9e3423098a0e8543eee4e 388 PRINTS PR00959 Mevalonate kinase family signature 119 141 2.2E-41 T 15-10-2018 Trad_0853 8b4fd9115fc9e3423098a0e8543eee4e 388 PRINTS PR00959 Mevalonate kinase family signature 331 348 2.2E-41 T 15-10-2018 Trad_0853 8b4fd9115fc9e3423098a0e8543eee4e 388 Pfam PF08544 GHMP kinases C terminal 283 363 3.0E-12 T 15-10-2018 IPR013750 GHMP kinase, C-terminal domain Trad_0853 8b4fd9115fc9e3423098a0e8543eee4e 388 Hamap MF_00246 Galactokinase [galK]. 29 384 39.318 T 15-10-2018 IPR022963 Galactokinase, bacterial GO:0004335|GO:0006012 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 Trad_0853 8b4fd9115fc9e3423098a0e8543eee4e 388 Gene3D G3DSA:3.30.230.10 25 201 1.1E-126 T 15-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Trad_0853 8b4fd9115fc9e3423098a0e8543eee4e 388 Pfam PF00288 GHMP kinases N terminal domain 117 181 4.4E-14 T 15-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 Trad_0853 8b4fd9115fc9e3423098a0e8543eee4e 388 SUPERFAMILY SSF55060 206 382 3.91E-47 T 15-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily Trad_0853 8b4fd9115fc9e3423098a0e8543eee4e 388 Gene3D G3DSA:3.30.70.890 202 360 1.1E-126 T 15-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily Trad_0853 8b4fd9115fc9e3423098a0e8543eee4e 388 TIGRFAM TIGR00131 gal_kin: galactokinase 10 381 4.5E-102 T 15-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 Trad_0853 8b4fd9115fc9e3423098a0e8543eee4e 388 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 121 132 - T 15-10-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 Trad_0853 8b4fd9115fc9e3423098a0e8543eee4e 388 SUPERFAMILY SSF54211 4 203 5.84E-60 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Trad_0853 8b4fd9115fc9e3423098a0e8543eee4e 388 PIRSF PIRSF000530 2 387 1.3E-116 T 15-10-2018 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 Trad_0853 8b4fd9115fc9e3423098a0e8543eee4e 388 PRINTS PR00473 Galactokinase signature 112 130 4.6E-25 T 15-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 Trad_0853 8b4fd9115fc9e3423098a0e8543eee4e 388 PRINTS PR00473 Galactokinase signature 267 281 4.6E-25 T 15-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 Trad_0853 8b4fd9115fc9e3423098a0e8543eee4e 388 PRINTS PR00473 Galactokinase signature 31 49 4.6E-25 T 15-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 Trad_0853 8b4fd9115fc9e3423098a0e8543eee4e 388 PRINTS PR00473 Galactokinase signature 92 103 4.6E-25 T 15-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 Trad_0853 8b4fd9115fc9e3423098a0e8543eee4e 388 Pfam PF10509 Galactokinase galactose-binding signature 13 61 4.7E-22 T 15-10-2018 IPR019539 Galactokinase galactose-binding domain GO:0005534 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 Trad_0853 8b4fd9115fc9e3423098a0e8543eee4e 388 ProSitePatterns PS00106 Galactokinase signature. 31 42 - T 15-10-2018 IPR019741 Galactokinase, conserved site KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 Trad_1502 e3cf98773e0e50d4edff80cc119cff64 173 TIGRFAM TIGR03164 UHCUDC: OHCU decarboxylase 12 166 1.2E-61 T 15-10-2018 IPR017580 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase, type 1 GO:0019428 KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 Trad_1502 e3cf98773e0e50d4edff80cc119cff64 173 Pfam PF09349 OHCU decarboxylase 8 164 2.6E-47 T 15-10-2018 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 Trad_1502 e3cf98773e0e50d4edff80cc119cff64 173 Gene3D G3DSA:1.10.3330.10 3 172 4.8E-63 T 15-10-2018 IPR036778 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase superfamily KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 Trad_1502 e3cf98773e0e50d4edff80cc119cff64 173 SUPERFAMILY SSF158694 4 167 4.71E-56 T 15-10-2018 IPR036778 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase superfamily KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 Trad_2994 682672206ecfa3114f94b2bb97c59e92 606 SMART SM01228 520 590 1.5E-14 T 15-10-2018 Trad_2994 682672206ecfa3114f94b2bb97c59e92 606 Gene3D G3DSA:1.10.150.570 545 595 3.5E-10 T 15-10-2018 Trad_2994 682672206ecfa3114f94b2bb97c59e92 606 Gene3D G3DSA:3.50.50.60 1 213 3.7E-70 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Trad_2994 682672206ecfa3114f94b2bb97c59e92 606 Gene3D G3DSA:3.50.50.60 299 451 3.6E-51 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Trad_2994 682672206ecfa3114f94b2bb97c59e92 606 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 1 593 6.3E-199 T 15-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 Trad_2994 682672206ecfa3114f94b2bb97c59e92 606 SUPERFAMILY SSF51905 1 251 1.0E-30 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Trad_2994 682672206ecfa3114f94b2bb97c59e92 606 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 361 384 - T 15-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 Trad_2994 682672206ecfa3114f94b2bb97c59e92 606 Pfam PF01134 Glucose inhibited division protein A 1 391 2.0E-139 T 15-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 Trad_2994 682672206ecfa3114f94b2bb97c59e92 606 Pfam PF13932 GidA associated domain 396 589 7.1E-48 T 15-10-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 Trad_2994 682672206ecfa3114f94b2bb97c59e92 606 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 266 280 - T 15-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 Trad_0622 e478f010c6e68a8a1f33a4ecf0d17b1c 286 Pfam PF00551 Formyl transferase 92 268 7.3E-42 T 15-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Trad_0622 e478f010c6e68a8a1f33a4ecf0d17b1c 286 Gene3D G3DSA:3.40.50.170 92 286 2.2E-71 T 15-10-2018 Trad_0622 e478f010c6e68a8a1f33a4ecf0d17b1c 286 Gene3D G3DSA:3.30.70.260 5 91 5.9E-30 T 15-10-2018 Trad_0622 e478f010c6e68a8a1f33a4ecf0d17b1c 286 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 42 54 2.8E-63 T 15-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 Trad_0622 e478f010c6e68a8a1f33a4ecf0d17b1c 286 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 260 285 2.8E-63 T 15-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 Trad_0622 e478f010c6e68a8a1f33a4ecf0d17b1c 286 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 9 35 2.8E-63 T 15-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 Trad_0622 e478f010c6e68a8a1f33a4ecf0d17b1c 286 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 93 115 2.8E-63 T 15-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 Trad_0622 e478f010c6e68a8a1f33a4ecf0d17b1c 286 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 238 260 2.8E-63 T 15-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 Trad_0622 e478f010c6e68a8a1f33a4ecf0d17b1c 286 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 115 142 2.8E-63 T 15-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 Trad_0622 e478f010c6e68a8a1f33a4ecf0d17b1c 286 Pfam PF01842 ACT domain 8 69 1.2E-12 T 15-10-2018 IPR002912 ACT domain Trad_0622 e478f010c6e68a8a1f33a4ecf0d17b1c 286 SUPERFAMILY SSF55021 6 89 3.24E-18 T 15-10-2018 Trad_0622 e478f010c6e68a8a1f33a4ecf0d17b1c 286 PIRSF PIRSF036480 4 286 2.1E-116 T 15-10-2018 Trad_0622 e478f010c6e68a8a1f33a4ecf0d17b1c 286 SUPERFAMILY SSF53328 92 286 9.29E-60 T 15-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Trad_0622 e478f010c6e68a8a1f33a4ecf0d17b1c 286 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 8 286 2.1E-121 T 15-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 Trad_0622 e478f010c6e68a8a1f33a4ecf0d17b1c 286 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 4 286 47.992 T 15-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 Trad_0750 1d7a49fd385848748cf0e59573b85a4c 224 Gene3D G3DSA:1.10.10.10 108 205 1.7E-12 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Trad_0750 1d7a49fd385848748cf0e59573b85a4c 224 SUPERFAMILY SSF46894 137 202 1.43E-12 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Trad_0750 1d7a49fd385848748cf0e59573b85a4c 224 Pfam PF00196 Bacterial regulatory proteins, luxR family 145 199 6.3E-9 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Trad_0750 1d7a49fd385848748cf0e59573b85a4c 224 SMART SM00421 143 200 3.2E-9 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Trad_1996 e1b21043bb5b454776ebbdb45260112d 283 Gene3D G3DSA:2.60.40.2250 8 254 9.3E-74 T 15-10-2018 Trad_1996 e1b21043bb5b454776ebbdb45260112d 283 Pfam PF01841 Transglutaminase-like superfamily 132 224 1.1E-21 T 15-10-2018 IPR002931 Transglutaminase-like Trad_1996 e1b21043bb5b454776ebbdb45260112d 283 SUPERFAMILY SSF54001 103 255 7.15E-36 T 15-10-2018 IPR038765 Papain-like cysteine peptidase superfamily Trad_1996 e1b21043bb5b454776ebbdb45260112d 283 Gene3D G3DSA:3.10.620.30 79 246 9.3E-74 T 15-10-2018 Trad_1996 e1b21043bb5b454776ebbdb45260112d 283 SMART SM00460 160 226 8.8E-16 T 15-10-2018 IPR002931 Transglutaminase-like Trad_2664 b8b4074831a1daae0dc6c176bf19254c 298 SUPERFAMILY SSF46955 8 89 1.6E-14 T 15-10-2018 IPR009061 Putative DNA-binding domain superfamily Trad_2664 b8b4074831a1daae0dc6c176bf19254c 298 Pfam PF02607 B12 binding domain 91 161 2.6E-12 T 15-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Trad_2664 b8b4074831a1daae0dc6c176bf19254c 298 Gene3D G3DSA:3.40.50.280 169 288 7.8E-23 T 15-10-2018 Trad_2664 b8b4074831a1daae0dc6c176bf19254c 298 SMART SM00422 8 77 5.6E-9 T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Trad_2664 b8b4074831a1daae0dc6c176bf19254c 298 Pfam PF02310 B12 binding domain 174 285 5.4E-12 T 15-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 Trad_2664 b8b4074831a1daae0dc6c176bf19254c 298 Gene3D G3DSA:1.10.1660.10 3 76 3.5E-22 T 15-10-2018 Trad_2664 b8b4074831a1daae0dc6c176bf19254c 298 Gene3D G3DSA:1.10.1240.10 88 165 2.1E-20 T 15-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Trad_2664 b8b4074831a1daae0dc6c176bf19254c 298 SUPERFAMILY SSF52242 167 289 2.98E-13 T 15-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 Trad_2664 b8b4074831a1daae0dc6c176bf19254c 298 Pfam PF13411 MerR HTH family regulatory protein 8 76 5.6E-13 T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Trad_0192 bc3b9d4f5cc1bee0cc4360e42c6a9055 797 Gene3D G3DSA:1.10.8.60 493 585 1.4E-22 T 15-10-2018 Trad_0192 bc3b9d4f5cc1bee0cc4360e42c6a9055 797 SUPERFAMILY SSF88697 4 196 6.71E-29 T 15-10-2018 IPR015947 PUA-like superfamily Trad_0192 bc3b9d4f5cc1bee0cc4360e42c6a9055 797 SUPERFAMILY SSF52540 304 580 3.81E-45 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_0192 bc3b9d4f5cc1bee0cc4360e42c6a9055 797 Gene3D G3DSA:2.30.130.40 1 110 8.1E-23 T 15-10-2018 Trad_0192 bc3b9d4f5cc1bee0cc4360e42c6a9055 797 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 357 376 1.0E-49 T 15-10-2018 Trad_0192 bc3b9d4f5cc1bee0cc4360e42c6a9055 797 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 704 723 1.0E-49 T 15-10-2018 Trad_0192 bc3b9d4f5cc1bee0cc4360e42c6a9055 797 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 596 612 1.0E-49 T 15-10-2018 Trad_0192 bc3b9d4f5cc1bee0cc4360e42c6a9055 797 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 674 693 1.0E-49 T 15-10-2018 Trad_0192 bc3b9d4f5cc1bee0cc4360e42c6a9055 797 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 727 745 1.0E-49 T 15-10-2018 Trad_0192 bc3b9d4f5cc1bee0cc4360e42c6a9055 797 SMART SM00464 4 198 4.7E-49 T 15-10-2018 IPR003111 Lon, substrate-binding domain Trad_0192 bc3b9d4f5cc1bee0cc4360e42c6a9055 797 Gene3D G3DSA:3.40.50.300 310 492 3.1E-63 T 15-10-2018 Trad_0192 bc3b9d4f5cc1bee0cc4360e42c6a9055 797 TIGRFAM TIGR00763 lon: endopeptidase La 6 771 1.2E-272 T 15-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 Trad_0192 bc3b9d4f5cc1bee0cc4360e42c6a9055 797 Gene3D G3DSA:1.20.58.1480 115 241 9.6E-36 T 15-10-2018 Trad_0192 bc3b9d4f5cc1bee0cc4360e42c6a9055 797 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 572 772 5.1E-86 T 15-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 Trad_0192 bc3b9d4f5cc1bee0cc4360e42c6a9055 797 PIRSF PIRSF001174 1 776 4.1E-298 T 15-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 Trad_0192 bc3b9d4f5cc1bee0cc4360e42c6a9055 797 SMART SM00382 349 494 7.7E-11 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_0192 bc3b9d4f5cc1bee0cc4360e42c6a9055 797 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 677 685 - T 15-10-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 Trad_0192 bc3b9d4f5cc1bee0cc4360e42c6a9055 797 Hamap MF_01973 Lon protease [lon]. 5 773 66.254 T 15-10-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 Trad_0192 bc3b9d4f5cc1bee0cc4360e42c6a9055 797 SUPERFAMILY SSF54211 596 772 6.83E-55 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Trad_0192 bc3b9d4f5cc1bee0cc4360e42c6a9055 797 Gene3D G3DSA:3.30.230.10 594 781 3.6E-75 T 15-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Trad_0192 bc3b9d4f5cc1bee0cc4360e42c6a9055 797 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 4 197 1.4E-28 T 15-10-2018 IPR003111 Lon, substrate-binding domain Trad_0192 bc3b9d4f5cc1bee0cc4360e42c6a9055 797 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 353 490 5.9E-22 T 15-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Trad_0842 b40e5de1dfedca0fec2b4d5ad5a2f27b 342 Gene3D G3DSA:3.30.360.10 124 331 4.3E-78 T 15-10-2018 Trad_0842 b40e5de1dfedca0fec2b4d5ad5a2f27b 342 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 1 115 2.4E-26 T 15-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 Trad_0842 b40e5de1dfedca0fec2b4d5ad5a2f27b 342 SUPERFAMILY SSF51735 2 141 4.15E-40 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_0842 b40e5de1dfedca0fec2b4d5ad5a2f27b 342 SUPERFAMILY SSF55347 129 265 1.85E-22 T 15-10-2018 Trad_0842 b40e5de1dfedca0fec2b4d5ad5a2f27b 342 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 154 233 2.7E-8 T 15-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 Trad_0842 b40e5de1dfedca0fec2b4d5ad5a2f27b 342 Gene3D G3DSA:3.40.50.720 2 312 4.3E-78 T 15-10-2018 Trad_2628 82f9d0320c353a5885e4b5c644f2f2bf 297 Hamap MF_01967 NAD-dependent protein deacetylase [cobB]. 20 291 60.409 T 15-10-2018 IPR026587 Sirtuin, class II Reactome: R-HSA-2151201 Trad_2628 82f9d0320c353a5885e4b5c644f2f2bf 297 Gene3D G3DSA:3.40.50.1220 36 286 1.7E-78 T 15-10-2018 Trad_2628 82f9d0320c353a5885e4b5c644f2f2bf 297 SUPERFAMILY SSF52467 28 295 6.13E-75 T 15-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily Trad_2628 82f9d0320c353a5885e4b5c644f2f2bf 297 Gene3D G3DSA:3.30.1600.10 52 216 1.7E-78 T 15-10-2018 IPR026591 Sirtuin, catalytic core small domain superfamily Trad_2628 82f9d0320c353a5885e4b5c644f2f2bf 297 Pfam PF02146 Sir2 family 43 246 5.9E-46 T 15-10-2018 IPR003000 Sirtuin family GO:0070403 Trad_1545 89dff637a5b56f049a5410ddb850f958 232 Pfam PF03099 Biotin/lipoate A/B protein ligase family 16 133 9.6E-9 T 15-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 Trad_1545 89dff637a5b56f049a5410ddb850f958 232 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 12 224 3.7E-33 T 15-10-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Trad_1545 89dff637a5b56f049a5410ddb850f958 232 Gene3D G3DSA:3.30.930.10 3 181 6.0E-35 T 15-10-2018 Trad_1545 89dff637a5b56f049a5410ddb850f958 232 SUPERFAMILY SSF55681 10 174 4.1E-34 T 15-10-2018 Trad_1545 89dff637a5b56f049a5410ddb850f958 232 Gene3D G3DSA:2.30.30.100 187 225 1.1E-5 T 15-10-2018 Trad_1563 6c28e00428bf4fb7e2c79e3994fe64ec 503 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 76 116 7.5E-6 T 15-10-2018 IPR000014 PAS domain Trad_1563 6c28e00428bf4fb7e2c79e3994fe64ec 503 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 272 403 2.8E-10 T 15-10-2018 IPR000014 PAS domain Trad_1563 6c28e00428bf4fb7e2c79e3994fe64ec 503 Gene3D G3DSA:3.30.450.20 121 189 3.8E-6 T 15-10-2018 Trad_1563 6c28e00428bf4fb7e2c79e3994fe64ec 503 Pfam PF08447 PAS fold 153 232 1.4E-10 T 15-10-2018 IPR013655 PAS fold-3 GO:0005515 Trad_1563 6c28e00428bf4fb7e2c79e3994fe64ec 503 Pfam PF00196 Bacterial regulatory proteins, luxR family 440 495 3.6E-19 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Trad_1563 6c28e00428bf4fb7e2c79e3994fe64ec 503 Pfam PF13426 PAS domain 300 395 8.4E-8 T 15-10-2018 IPR000014 PAS domain Trad_1563 6c28e00428bf4fb7e2c79e3994fe64ec 503 Pfam PF13426 PAS domain 19 109 4.8E-4 T 15-10-2018 IPR000014 PAS domain Trad_1563 6c28e00428bf4fb7e2c79e3994fe64ec 503 SMART SM00091 275 346 0.0029 T 15-10-2018 IPR000014 PAS domain Trad_1563 6c28e00428bf4fb7e2c79e3994fe64ec 503 SMART SM00091 9 74 33.0 T 15-10-2018 IPR000014 PAS domain Trad_1563 6c28e00428bf4fb7e2c79e3994fe64ec 503 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 455 471 6.8E-10 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Trad_1563 6c28e00428bf4fb7e2c79e3994fe64ec 503 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 441 455 6.8E-10 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Trad_1563 6c28e00428bf4fb7e2c79e3994fe64ec 503 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 471 483 6.8E-10 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Trad_1563 6c28e00428bf4fb7e2c79e3994fe64ec 503 SUPERFAMILY SSF55785 107 236 6.11E-15 T 15-10-2018 IPR035965 PAS domain superfamily Trad_1563 6c28e00428bf4fb7e2c79e3994fe64ec 503 Gene3D G3DSA:2.10.70.100 194 240 1.8E-12 T 15-10-2018 Trad_1563 6c28e00428bf4fb7e2c79e3994fe64ec 503 Gene3D G3DSA:3.30.450.20 10 120 1.8E-9 T 15-10-2018 Trad_1563 6c28e00428bf4fb7e2c79e3994fe64ec 503 SMART SM00086 352 396 3.3 T 15-10-2018 IPR001610 PAC motif Trad_1563 6c28e00428bf4fb7e2c79e3994fe64ec 503 SMART SM00086 70 110 0.033 T 15-10-2018 IPR001610 PAC motif Trad_1563 6c28e00428bf4fb7e2c79e3994fe64ec 503 SMART SM00086 196 238 3.5E-4 T 15-10-2018 IPR001610 PAC motif Trad_1563 6c28e00428bf4fb7e2c79e3994fe64ec 503 SUPERFAMILY SSF55785 24 119 1.74E-11 T 15-10-2018 IPR035965 PAS domain superfamily Trad_1563 6c28e00428bf4fb7e2c79e3994fe64ec 503 Gene3D G3DSA:3.30.450.20 262 397 7.1E-15 T 15-10-2018 Trad_1563 6c28e00428bf4fb7e2c79e3994fe64ec 503 SUPERFAMILY SSF55785 265 394 6.46E-14 T 15-10-2018 IPR035965 PAS domain superfamily Trad_1563 6c28e00428bf4fb7e2c79e3994fe64ec 503 SMART SM00421 438 495 1.8E-22 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Trad_1563 6c28e00428bf4fb7e2c79e3994fe64ec 503 Gene3D G3DSA:1.10.10.10 398 502 7.2E-28 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Trad_1563 6c28e00428bf4fb7e2c79e3994fe64ec 503 SUPERFAMILY SSF46894 432 501 2.75E-19 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Trad_0476 142f57ec81e1abcbd9f9a186ae6223bf 300 Pfam PF14559 Tetratricopeptide repeat 227 291 3.7E-7 T 15-10-2018 Trad_0476 142f57ec81e1abcbd9f9a186ae6223bf 300 SUPERFAMILY SSF48452 134 290 2.28E-23 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Trad_0476 142f57ec81e1abcbd9f9a186ae6223bf 300 Pfam PF13432 Tetratricopeptide repeat 136 196 2.9E-9 T 15-10-2018 Trad_0476 142f57ec81e1abcbd9f9a186ae6223bf 300 SMART SM00028 163 196 1.8 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Trad_0476 142f57ec81e1abcbd9f9a186ae6223bf 300 SMART SM00028 250 283 2.5E-4 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Trad_0476 142f57ec81e1abcbd9f9a186ae6223bf 300 SMART SM00028 216 249 99.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Trad_0476 142f57ec81e1abcbd9f9a186ae6223bf 300 SMART SM00028 129 162 11.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Trad_0476 142f57ec81e1abcbd9f9a186ae6223bf 300 Gene3D G3DSA:1.25.40.10 215 298 1.3E-13 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Trad_0476 142f57ec81e1abcbd9f9a186ae6223bf 300 Gene3D G3DSA:1.25.40.10 65 208 3.1E-20 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Trad_0476 142f57ec81e1abcbd9f9a186ae6223bf 300 SUPERFAMILY SSF48452 44 162 3.34E-9 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Trad_0451 c58eabc540f0d10b79f31ad91927d45a 504 SUPERFAMILY SSF53067 252 497 9.66E-51 T 15-10-2018 Trad_0451 c58eabc540f0d10b79f31ad91927d45a 504 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 10 250 1.4E-48 T 15-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 Trad_0451 c58eabc540f0d10b79f31ad91927d45a 504 Gene3D G3DSA:3.30.420.40 3 241 3.6E-71 T 15-10-2018 Trad_0451 c58eabc540f0d10b79f31ad91927d45a 504 Gene3D G3DSA:3.30.420.40 254 503 6.7E-67 T 15-10-2018 Trad_0451 c58eabc540f0d10b79f31ad91927d45a 504 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 260 453 1.5E-32 T 15-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 Trad_0451 c58eabc540f0d10b79f31ad91927d45a 504 PIRSF PIRSF000538 7 503 6.7E-120 T 15-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 Trad_0451 c58eabc540f0d10b79f31ad91927d45a 504 SUPERFAMILY SSF53067 10 253 1.47E-57 T 15-10-2018 Trad_0451 c58eabc540f0d10b79f31ad91927d45a 504 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 359 379 - T 15-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 Trad_1471 630e6b53bbdfd463bd03ad95acd8711b 385 Pfam PF00871 Acetokinase family 8 376 6.1E-126 T 15-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Trad_1471 630e6b53bbdfd463bd03ad95acd8711b 385 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 193 210 - T 15-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Trad_1471 630e6b53bbdfd463bd03ad95acd8711b 385 Gene3D G3DSA:3.30.420.40 186 384 7.7E-74 T 15-10-2018 Trad_1471 630e6b53bbdfd463bd03ad95acd8711b 385 TIGRFAM TIGR00016 ackA: acetate kinase 8 379 5.1E-127 T 15-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Trad_1471 630e6b53bbdfd463bd03ad95acd8711b 385 SUPERFAMILY SSF53067 7 185 6.47E-56 T 15-10-2018 Trad_1471 630e6b53bbdfd463bd03ad95acd8711b 385 Hamap MF_00020 Acetate kinase [ackA]. 1 385 156.614 T 15-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Trad_1471 630e6b53bbdfd463bd03ad95acd8711b 385 PIRSF PIRSF000722 6 384 5.8E-130 T 15-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Trad_1471 630e6b53bbdfd463bd03ad95acd8711b 385 SUPERFAMILY SSF53067 146 382 5.46E-81 T 15-10-2018 Trad_1471 630e6b53bbdfd463bd03ad95acd8711b 385 Gene3D G3DSA:3.30.420.40 4 185 7.4E-60 T 15-10-2018 Trad_1471 630e6b53bbdfd463bd03ad95acd8711b 385 PRINTS PR00471 Acetate kinase family signature 8 19 1.3E-38 T 15-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Trad_1471 630e6b53bbdfd463bd03ad95acd8711b 385 PRINTS PR00471 Acetate kinase family signature 163 176 1.3E-38 T 15-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Trad_1471 630e6b53bbdfd463bd03ad95acd8711b 385 PRINTS PR00471 Acetate kinase family signature 289 302 1.3E-38 T 15-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Trad_1471 630e6b53bbdfd463bd03ad95acd8711b 385 PRINTS PR00471 Acetate kinase family signature 193 214 1.3E-38 T 15-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Trad_1471 630e6b53bbdfd463bd03ad95acd8711b 385 PRINTS PR00471 Acetate kinase family signature 363 375 1.3E-38 T 15-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Trad_1471 630e6b53bbdfd463bd03ad95acd8711b 385 PRINTS PR00471 Acetate kinase family signature 311 327 1.3E-38 T 15-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Trad_1471 630e6b53bbdfd463bd03ad95acd8711b 385 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 8 19 - T 15-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Trad_0934 90ed86723e7e1e57d5826535c27d9158 860 Gene3D G3DSA:1.25.40.10 568 756 3.5E-13 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Trad_0934 90ed86723e7e1e57d5826535c27d9158 860 Gene3D G3DSA:1.25.40.10 757 856 1.9E-10 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Trad_0934 90ed86723e7e1e57d5826535c27d9158 860 SMART SM01043 88 225 1.6E-19 T 15-10-2018 IPR005158 Bacterial transcriptional activator domain Trad_0934 90ed86723e7e1e57d5826535c27d9158 860 Pfam PF13424 Tetratricopeptide repeat 764 835 5.6E-9 T 15-10-2018 Trad_0934 90ed86723e7e1e57d5826535c27d9158 860 SMART SM00028 714 747 460.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Trad_0934 90ed86723e7e1e57d5826535c27d9158 860 SMART SM00028 763 796 3.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Trad_0934 90ed86723e7e1e57d5826535c27d9158 860 SMART SM00028 803 836 8.6 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Trad_0934 90ed86723e7e1e57d5826535c27d9158 860 SMART SM00028 142 175 200.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Trad_0934 90ed86723e7e1e57d5826535c27d9158 860 SUPERFAMILY SSF48452 96 232 1.61E-13 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Trad_0934 90ed86723e7e1e57d5826535c27d9158 860 PRINTS PR00364 Disease resistance protein signature 332 346 6.3E-8 T 15-10-2018 Trad_0934 90ed86723e7e1e57d5826535c27d9158 860 PRINTS PR00364 Disease resistance protein signature 412 426 6.3E-8 T 15-10-2018 Trad_0934 90ed86723e7e1e57d5826535c27d9158 860 PRINTS PR00364 Disease resistance protein signature 847 860 6.3E-8 T 15-10-2018 Trad_0934 90ed86723e7e1e57d5826535c27d9158 860 PRINTS PR00364 Disease resistance protein signature 268 283 6.3E-8 T 15-10-2018 Trad_0934 90ed86723e7e1e57d5826535c27d9158 860 Pfam PF03704 Bacterial transcriptional activator domain 90 225 3.8E-9 T 15-10-2018 IPR005158 Bacterial transcriptional activator domain Trad_0934 90ed86723e7e1e57d5826535c27d9158 860 Gene3D G3DSA:3.40.50.300 238 376 2.1E-15 T 15-10-2018 Trad_0934 90ed86723e7e1e57d5826535c27d9158 860 SUPERFAMILY SSF52540 246 476 9.61E-17 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_0934 90ed86723e7e1e57d5826535c27d9158 860 SUPERFAMILY SSF48452 603 749 2.66E-8 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Trad_0934 90ed86723e7e1e57d5826535c27d9158 860 Gene3D G3DSA:1.25.40.10 85 237 1.5E-15 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Trad_0934 90ed86723e7e1e57d5826535c27d9158 860 SUPERFAMILY SSF48452 759 839 8.92E-9 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Trad_1112 9ee6fadf4f6648d022b1f957eb575730 338 Pfam PF00348 Polyprenyl synthetase 32 275 3.3E-51 T 15-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 Trad_1112 9ee6fadf4f6648d022b1f957eb575730 338 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 213 225 - T 15-10-2018 IPR033749 Polyprenyl synthetase, conserved site Trad_1112 9ee6fadf4f6648d022b1f957eb575730 338 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 80 94 - T 15-10-2018 IPR033749 Polyprenyl synthetase, conserved site Trad_1112 9ee6fadf4f6648d022b1f957eb575730 338 SUPERFAMILY SSF48576 23 336 1.37E-64 T 15-10-2018 IPR008949 Isoprenoid synthase domain superfamily Trad_1112 9ee6fadf4f6648d022b1f957eb575730 338 Gene3D G3DSA:1.10.600.10 5 338 2.4E-92 T 15-10-2018 IPR008949 Isoprenoid synthase domain superfamily Trad_2234 96eb3a98b181591ceee835fa9f2ffa18 194 TIGRFAM TIGR00636 PduO_Nterm: ATP:cob(I)alamin adenosyltransferase 4 185 1.0E-58 T 15-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 Trad_2234 96eb3a98b181591ceee835fa9f2ffa18 194 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 9 186 7.0E-30 T 15-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 Trad_2234 96eb3a98b181591ceee835fa9f2ffa18 194 Gene3D G3DSA:1.20.1200.10 12 191 7.8E-61 T 15-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 Trad_2234 96eb3a98b181591ceee835fa9f2ffa18 194 SUPERFAMILY SSF89028 1 186 1.73E-61 T 15-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 Trad_2234 96eb3a98b181591ceee835fa9f2ffa18 194 Pfam PF01923 Cobalamin adenosyltransferase 3 174 3.7E-61 T 15-10-2018 IPR016030 Cobalamin adenosyltransferase-like KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 Trad_1862 5e25da290ea6c9d1f1e8ac273872de83 130 Pfam PF01850 PIN domain 3 120 1.5E-8 T 15-10-2018 IPR002716 PIN domain Trad_1862 5e25da290ea6c9d1f1e8ac273872de83 130 Gene3D G3DSA:3.40.50.1010 1 123 6.8E-8 T 15-10-2018 Trad_1862 5e25da290ea6c9d1f1e8ac273872de83 130 SUPERFAMILY SSF88723 1 130 2.8E-16 T 15-10-2018 IPR029060 PIN-like domain superfamily Trad_1664 44c3f9fae1fc3018fe77dbdf824e9cea 475 TIGRFAM TIGR02577 cas_TM1794_Cmr2: CRISPR-associated protein Cas10/Cmr2, subtype III-B 235 356 1.4E-33 T 15-10-2018 IPR013407 CRISPR-associated protein Cmr2 Trad_1664 44c3f9fae1fc3018fe77dbdf824e9cea 475 Gene3D G3DSA:3.30.70.2230 241 378 5.2E-38 T 15-10-2018 Trad_1664 44c3f9fae1fc3018fe77dbdf824e9cea 475 Pfam PF12469 CRISPR-associated protein 5 48 3.1E-10 T 15-10-2018 IPR024615 CRISPR-associated protein Cmr2, N-terminal Trad_1664 44c3f9fae1fc3018fe77dbdf824e9cea 475 Gene3D G3DSA:3.30.70.2220 2 55 2.5E-10 T 15-10-2018 IPR038242 Cmr2, N-terminal domain superfamily Trad_0967 32870f6d3a6d33c8c96d9835a3a627fd 303 Pfam PF12833 Helix-turn-helix domain 219 296 2.1E-25 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Trad_0967 32870f6d3a6d33c8c96d9835a3a627fd 303 SMART SM00342 213 296 5.7E-29 T 15-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Trad_0967 32870f6d3a6d33c8c96d9835a3a627fd 303 Gene3D G3DSA:1.10.10.60 193 300 6.2E-31 T 15-10-2018 Trad_0967 32870f6d3a6d33c8c96d9835a3a627fd 303 SUPERFAMILY SSF46689 249 297 1.41E-12 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Trad_0967 32870f6d3a6d33c8c96d9835a3a627fd 303 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 280 296 5.8E-5 T 15-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Trad_0967 32870f6d3a6d33c8c96d9835a3a627fd 303 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 265 280 5.8E-5 T 15-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Trad_0967 32870f6d3a6d33c8c96d9835a3a627fd 303 SUPERFAMILY SSF51215 49 155 2.88E-5 T 15-10-2018 IPR037923 Transcription regulator HTH-like Trad_0967 32870f6d3a6d33c8c96d9835a3a627fd 303 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 250 292 - T 15-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 Trad_0967 32870f6d3a6d33c8c96d9835a3a627fd 303 SUPERFAMILY SSF46689 196 245 1.43E-9 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Trad_2074 1ea323a52e7208ee16f3f3918b533bde 426 SMART SM00382 49 318 6.3E-13 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_2074 1ea323a52e7208ee16f3f3918b533bde 426 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 4 426 7.4E-180 T 15-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 Trad_2074 1ea323a52e7208ee16f3f3918b533bde 426 SUPERFAMILY SSF52540 4 423 6.05E-79 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_2074 1ea323a52e7208ee16f3f3918b533bde 426 Gene3D G3DSA:3.40.50.300 6 318 9.0E-100 T 15-10-2018 Trad_2074 1ea323a52e7208ee16f3f3918b533bde 426 SMART SM01086 321 412 5.3E-7 T 15-10-2018 IPR019489 Clp ATPase, C-terminal Trad_2074 1ea323a52e7208ee16f3f3918b533bde 426 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 53 127 7.2E-7 T 15-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Trad_2074 1ea323a52e7208ee16f3f3918b533bde 426 Pfam PF07724 AAA domain (Cdc48 subfamily) 177 315 5.0E-40 T 15-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Trad_2074 1ea323a52e7208ee16f3f3918b533bde 426 Gene3D G3DSA:1.10.8.10 110 229 9.0E-100 T 15-10-2018 Trad_2074 1ea323a52e7208ee16f3f3918b533bde 426 Gene3D G3DSA:1.10.8.60 321 423 2.9E-31 T 15-10-2018 Trad_1317 4201092c67670ba2dac60ea902ebb4db 327 SUPERFAMILY SSF161098 91 308 4.91E-21 T 15-10-2018 IPR035906 MetI-like superfamily Trad_1317 4201092c67670ba2dac60ea902ebb4db 327 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 326 1.5E-43 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Trad_1317 4201092c67670ba2dac60ea902ebb4db 327 Gene3D G3DSA:1.10.3720.10 85 317 4.7E-27 T 15-10-2018 IPR035906 MetI-like superfamily Trad_0377 7a16d2b917085b0456dcb7114c0ac664 219 Gene3D G3DSA:3.40.50.1240 12 214 9.5E-54 T 15-10-2018 IPR029033 Histidine phosphatase superfamily Trad_0377 7a16d2b917085b0456dcb7114c0ac664 219 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 14 201 5.2E-52 T 15-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Trad_0377 7a16d2b917085b0456dcb7114c0ac664 219 PIRSF PIRSF000709 8 188 2.7E-12 T 15-10-2018 Trad_0377 7a16d2b917085b0456dcb7114c0ac664 219 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 16 25 - T 15-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 Trad_0377 7a16d2b917085b0456dcb7114c0ac664 219 SUPERFAMILY SSF53254 13 210 1.0E-53 T 15-10-2018 IPR029033 Histidine phosphatase superfamily Trad_0377 7a16d2b917085b0456dcb7114c0ac664 219 SMART SM00855 13 162 1.2E-21 T 15-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Trad_1035 b329737fc2b2ee1720c089d630363c3f 690 Pfam PF00679 Elongation factor G C-terminus 601 686 5.3E-33 T 15-10-2018 IPR000640 Elongation factor EFG, domain V-like Trad_1035 b329737fc2b2ee1720c089d630363c3f 690 Gene3D G3DSA:3.40.50.300 4 294 4.0E-110 T 15-10-2018 Trad_1035 b329737fc2b2ee1720c089d630363c3f 690 Gene3D G3DSA:3.30.230.10 484 686 7.1E-97 T 15-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Trad_1035 b329737fc2b2ee1720c089d630363c3f 690 SUPERFAMILY SSF54980 402 480 5.76E-25 T 15-10-2018 IPR035647 EF-G domain III/V-like Trad_1035 b329737fc2b2ee1720c089d630363c3f 690 Pfam PF03144 Elongation factor Tu domain 2 324 391 6.2E-16 T 15-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 Trad_1035 b329737fc2b2ee1720c089d630363c3f 690 Hamap MF_00054_B Elongation factor G [fusA]. 8 690 110.996 T 15-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Trad_1035 b329737fc2b2ee1720c089d630363c3f 690 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 11 182 1.7E-34 T 15-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Trad_1035 b329737fc2b2ee1720c089d630363c3f 690 Pfam PF03764 Elongation factor G, domain IV 479 597 2.2E-49 T 15-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 Trad_1035 b329737fc2b2ee1720c089d630363c3f 690 Gene3D G3DSA:3.30.70.870 406 483 2.5E-32 T 15-10-2018 Trad_1035 b329737fc2b2ee1720c089d630363c3f 690 SMART SM00889 480 598 9.2E-77 T 15-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 Trad_1035 b329737fc2b2ee1720c089d630363c3f 690 Pfam PF14492 Elongation Factor G, domain II 404 477 8.3E-34 T 15-10-2018 Trad_1035 b329737fc2b2ee1720c089d630363c3f 690 SMART SM00838 600 687 4.3E-58 T 15-10-2018 IPR000640 Elongation factor EFG, domain V-like Trad_1035 b329737fc2b2ee1720c089d630363c3f 690 TIGRFAM TIGR00484 EF-G: translation elongation factor G 7 690 0.0 T 15-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Trad_1035 b329737fc2b2ee1720c089d630363c3f 690 Gene3D G3DSA:3.30.70.240 604 674 7.1E-97 T 15-10-2018 Trad_1035 b329737fc2b2ee1720c089d630363c3f 690 SUPERFAMILY SSF50447 265 404 9.84E-37 T 15-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Trad_1035 b329737fc2b2ee1720c089d630363c3f 690 Pfam PF00009 Elongation factor Tu GTP binding domain 10 282 8.0E-68 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Trad_1035 b329737fc2b2ee1720c089d630363c3f 690 SUPERFAMILY SSF54211 479 598 2.53E-48 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Trad_1035 b329737fc2b2ee1720c089d630363c3f 690 PRINTS PR00315 GTP-binding elongation factor signature 132 141 1.1E-14 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Trad_1035 b329737fc2b2ee1720c089d630363c3f 690 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.1E-14 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Trad_1035 b329737fc2b2ee1720c089d630363c3f 690 PRINTS PR00315 GTP-binding elongation factor signature 60 68 1.1E-14 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Trad_1035 b329737fc2b2ee1720c089d630363c3f 690 PRINTS PR00315 GTP-binding elongation factor signature 80 90 1.1E-14 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Trad_1035 b329737fc2b2ee1720c089d630363c3f 690 PRINTS PR00315 GTP-binding elongation factor signature 96 107 1.1E-14 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Trad_1035 b329737fc2b2ee1720c089d630363c3f 690 Gene3D G3DSA:2.40.30.10 295 405 4.0E-44 T 15-10-2018 Trad_1035 b329737fc2b2ee1720c089d630363c3f 690 SUPERFAMILY SSF52540 8 282 8.64E-109 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_1035 b329737fc2b2ee1720c089d630363c3f 690 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 53 68 - T 15-10-2018 IPR031157 Tr-type G domain, conserved site Trad_1035 b329737fc2b2ee1720c089d630363c3f 690 SUPERFAMILY SSF54980 603 689 1.34E-32 T 15-10-2018 IPR035647 EF-G domain III/V-like Trad_1013 a2a40ec4ad0abcdfe2331c61c85d8db8 284 Pfam PF00005 ABC transporter 24 163 1.7E-23 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Trad_1013 a2a40ec4ad0abcdfe2331c61c85d8db8 284 SMART SM00382 30 211 7.8E-12 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_1013 a2a40ec4ad0abcdfe2331c61c85d8db8 284 Gene3D G3DSA:3.40.50.300 3 231 1.7E-55 T 15-10-2018 Trad_1013 a2a40ec4ad0abcdfe2331c61c85d8db8 284 SUPERFAMILY SSF52540 6 225 6.92E-51 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_1013 a2a40ec4ad0abcdfe2331c61c85d8db8 284 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Trad_1004 09fc00159a2f56531c5c9264d0c30960 423 Pfam PF00675 Insulinase (Peptidase family M16) 26 156 3.6E-8 T 15-10-2018 IPR011765 Peptidase M16, N-terminal Trad_1004 09fc00159a2f56531c5c9264d0c30960 423 SUPERFAMILY SSF63411 227 408 4.33E-37 T 15-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 Trad_1004 09fc00159a2f56531c5c9264d0c30960 423 Gene3D G3DSA:3.30.830.10 9 215 1.5E-32 T 15-10-2018 Trad_1004 09fc00159a2f56531c5c9264d0c30960 423 Pfam PF05193 Peptidase M16 inactive domain 177 340 1.3E-23 T 15-10-2018 IPR007863 Peptidase M16, C-terminal Trad_1004 09fc00159a2f56531c5c9264d0c30960 423 Gene3D G3DSA:3.30.830.10 218 408 1.3E-43 T 15-10-2018 Trad_1004 09fc00159a2f56531c5c9264d0c30960 423 SUPERFAMILY SSF63411 7 218 1.47E-38 T 15-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 Trad_2205 c2109612d51241662f1733edeae0bb86 479 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 6 471 53.934 T 15-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 Trad_2205 c2109612d51241662f1733edeae0bb86 479 ProSitePatterns PS01244 Aconitase family signature 2. 403 416 - T 15-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 Trad_2205 c2109612d51241662f1733edeae0bb86 479 Gene3D G3DSA:3.30.499.20 10 291 2.0E-93 T 15-10-2018 Trad_2205 c2109612d51241662f1733edeae0bb86 479 SUPERFAMILY SSF53732 6 470 3.53E-153 T 15-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 Trad_2205 c2109612d51241662f1733edeae0bb86 479 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 7 470 1.9E-186 T 15-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 Trad_2205 c2109612d51241662f1733edeae0bb86 479 PRINTS PR00415 Aconitase family signature 87 100 3.9E-40 T 15-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Trad_2205 c2109612d51241662f1733edeae0bb86 479 PRINTS PR00415 Aconitase family signature 113 121 3.9E-40 T 15-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Trad_2205 c2109612d51241662f1733edeae0bb86 479 PRINTS PR00415 Aconitase family signature 214 227 3.9E-40 T 15-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Trad_2205 c2109612d51241662f1733edeae0bb86 479 PRINTS PR00415 Aconitase family signature 200 213 3.9E-40 T 15-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Trad_2205 c2109612d51241662f1733edeae0bb86 479 PRINTS PR00415 Aconitase family signature 124 137 3.9E-40 T 15-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Trad_2205 c2109612d51241662f1733edeae0bb86 479 PRINTS PR00415 Aconitase family signature 347 358 3.9E-40 T 15-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Trad_2205 c2109612d51241662f1733edeae0bb86 479 PRINTS PR00415 Aconitase family signature 403 416 3.9E-40 T 15-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Trad_2205 c2109612d51241662f1733edeae0bb86 479 PRINTS PR00415 Aconitase family signature 138 153 3.9E-40 T 15-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Trad_2205 c2109612d51241662f1733edeae0bb86 479 PRINTS PR00415 Aconitase family signature 291 305 3.9E-40 T 15-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Trad_2205 c2109612d51241662f1733edeae0bb86 479 Gene3D G3DSA:3.30.499.10 329 478 8.8E-44 T 15-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 Trad_2205 c2109612d51241662f1733edeae0bb86 479 Pfam PF00330 Aconitase family (aconitate hydratase) 12 462 3.8E-146 T 15-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Trad_0859 2aceba4bf8c725b8fedf4d6441345f97 304 SUPERFAMILY SSF81345 28 297 1.31E-38 T 15-10-2018 IPR037294 ABC transporter, BtuC-like Trad_0859 2aceba4bf8c725b8fedf4d6441345f97 304 Pfam PF00950 ABC 3 transport family 45 300 2.1E-71 T 15-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 Trad_1871 e552bb1df739f2018b3aa59284974159 153 Gene3D G3DSA:3.90.79.10 3 132 2.7E-27 T 15-10-2018 Trad_1871 e552bb1df739f2018b3aa59284974159 153 ProSitePatterns PS00893 Nudix box signature. 43 64 - T 15-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 Trad_1871 e552bb1df739f2018b3aa59284974159 153 Pfam PF00293 NUDIX domain 13 124 6.2E-20 T 15-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Trad_1871 e552bb1df739f2018b3aa59284974159 153 SUPERFAMILY SSF55811 6 141 3.11E-28 T 15-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Trad_1871 e552bb1df739f2018b3aa59284974159 153 PRINTS PR00502 NUDIX hydrolase family signature 38 52 2.8E-6 T 15-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Trad_1871 e552bb1df739f2018b3aa59284974159 153 PRINTS PR00502 NUDIX hydrolase family signature 52 67 2.8E-6 T 15-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Trad_1709 034d2741d126410552c1c4075858bdb4 348 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 215 276 1.9E-19 T 15-10-2018 IPR017703 YgfZ/GcvT conserved site Trad_1709 034d2741d126410552c1c4075858bdb4 348 Pfam PF01571 Aminomethyltransferase folate-binding domain 46 244 1.4E-25 T 15-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain Trad_1709 034d2741d126410552c1c4075858bdb4 348 Gene3D G3DSA:3.30.1360.120 16 339 4.4E-65 T 15-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 Trad_1709 034d2741d126410552c1c4075858bdb4 348 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 251 318 3.5E-9 T 15-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 Trad_1709 034d2741d126410552c1c4075858bdb4 348 SUPERFAMILY SSF103025 34 266 5.34E-47 T 15-10-2018 Trad_1709 034d2741d126410552c1c4075858bdb4 348 PIRSF PIRSF006487 17 348 3.2E-27 T 15-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 Trad_2477 4c833aa375da04b6e8416cd3e0e806ff 127 SUPERFAMILY SSF54736 57 127 3.31E-23 T 15-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like Trad_2477 4c833aa375da04b6e8416cd3e0e806ff 127 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 127 3.2E-40 T 15-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_2477 4c833aa375da04b6e8416cd3e0e806ff 127 Gene3D G3DSA:1.20.5.710 3 57 8.6E-16 T 15-10-2018 Trad_2477 4c833aa375da04b6e8416cd3e0e806ff 127 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 68 127 5.0E-9 T 15-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_2477 4c833aa375da04b6e8416cd3e0e806ff 127 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 5 52 6.3E-17 T 15-10-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_2477 4c833aa375da04b6e8416cd3e0e806ff 127 Gene3D G3DSA:3.30.1390.10 58 127 1.1E-27 T 15-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like Trad_2477 4c833aa375da04b6e8416cd3e0e806ff 127 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 127 22.659 T 15-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_2477 4c833aa375da04b6e8416cd3e0e806ff 127 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 62 127 2.2E-26 T 15-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_2477 4c833aa375da04b6e8416cd3e0e806ff 127 SUPERFAMILY SSF48300 4 64 8.11E-15 T 15-10-2018 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_2128 96189168ad007f86600ca6af2e395e96 384 Pfam PF17186 Lipocalin-like domain 235 361 1.4E-37 T 15-10-2018 Trad_2128 96189168ad007f86600ca6af2e395e96 384 Gene3D G3DSA:2.40.370.10 233 365 9.8E-41 T 15-10-2018 IPR023374 AttH-like domain superfamily Trad_2128 96189168ad007f86600ca6af2e395e96 384 SUPERFAMILY SSF159245 26 361 2.22E-78 T 15-10-2018 Trad_2128 96189168ad007f86600ca6af2e395e96 384 Gene3D G3DSA:2.40.370.10 37 230 5.2E-46 T 15-10-2018 IPR023374 AttH-like domain superfamily Trad_2128 96189168ad007f86600ca6af2e395e96 384 Pfam PF07143 CrtC N-terminal lipocalin domain 48 228 5.8E-47 T 15-10-2018 IPR010791 AttH domain Trad_2864 fec021ad61e5a24eedec37a0653541a7 1060 Pfam PF04932 O-Antigen ligase 188 524 9.6E-14 T 15-10-2018 IPR007016 O-antigen ligase-related Trad_2864 fec021ad61e5a24eedec37a0653541a7 1060 Pfam PF13727 CoA-binding domain 662 827 7.7E-10 T 15-10-2018 Trad_2864 fec021ad61e5a24eedec37a0653541a7 1060 SUPERFAMILY SSF51735 730 825 1.06E-11 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_2864 fec021ad61e5a24eedec37a0653541a7 1060 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 603 1060 2.7E-107 T 15-10-2018 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase Trad_2864 fec021ad61e5a24eedec37a0653541a7 1060 Pfam PF02397 Bacterial sugar transferase 863 1055 2.3E-61 T 15-10-2018 IPR003362 Bacterial sugar transferase Trad_2864 fec021ad61e5a24eedec37a0653541a7 1060 TIGRFAM TIGR03022 WbaP_sugtrans: undecaprenyl-phosphate galactose phosphotransferase WbaP 600 1060 7.8E-135 T 15-10-2018 IPR017472 Undecaprenyl-phosphate galactose phosphotransferase, WbaP GO:0000271|GO:0005886|GO:0016021|GO:0016740 Trad_2864 fec021ad61e5a24eedec37a0653541a7 1060 Gene3D G3DSA:3.40.50.720 729 847 4.2E-20 T 15-10-2018 Trad_1667 947eaeb190177c03042833bb8a311479 134 Pfam PF09701 CRISPR-associated protein (Cas_Cmr5) 8 118 2.3E-23 T 15-10-2018 IPR010160 CRISPR-associated protein, Cmr5 Trad_1667 947eaeb190177c03042833bb8a311479 134 SUPERFAMILY SSF158568 4 121 1.1E-25 T 15-10-2018 IPR023101 AF1862-like domain superfamily Trad_1667 947eaeb190177c03042833bb8a311479 134 TIGRFAM TIGR01881 cas_Cmr5: CRISPR type III-B/RAMP module-associated protein Cmr5 5 115 1.1E-9 T 15-10-2018 IPR010160 CRISPR-associated protein, Cmr5 Trad_1667 947eaeb190177c03042833bb8a311479 134 Gene3D G3DSA:1.10.520.30 4 122 1.1E-26 T 15-10-2018 IPR023101 AF1862-like domain superfamily Trad_0904 b3cb114e6437ef5dcebf26413a6260ef 587 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 178 343 4.3E-42 T 15-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Trad_0904 b3cb114e6437ef5dcebf26413a6260ef 587 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 490 581 1.4E-8 T 15-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Trad_0904 b3cb114e6437ef5dcebf26413a6260ef 587 Gene3D G3DSA:3.90.480.20 10 181 9.0E-21 T 15-10-2018 Trad_0904 b3cb114e6437ef5dcebf26413a6260ef 587 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 81 139 7.3E-16 T 15-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Trad_0904 b3cb114e6437ef5dcebf26413a6260ef 587 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 365 433 7.5E-11 T 15-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Trad_0904 b3cb114e6437ef5dcebf26413a6260ef 587 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 494 510 - T 15-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Trad_0904 b3cb114e6437ef5dcebf26413a6260ef 587 SUPERFAMILY SSF55124 15 149 3.76E-28 T 15-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Trad_0904 b3cb114e6437ef5dcebf26413a6260ef 587 SUPERFAMILY SSF55124 361 438 1.59E-16 T 15-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Trad_0904 b3cb114e6437ef5dcebf26413a6260ef 587 Gene3D G3DSA:3.30.413.10 207 352 2.9E-42 T 15-10-2018 Trad_0904 b3cb114e6437ef5dcebf26413a6260ef 587 Gene3D G3DSA:3.90.480.10 354 438 4.4E-19 T 15-10-2018 Trad_0904 b3cb114e6437ef5dcebf26413a6260ef 587 SUPERFAMILY SSF56014 150 359 7.98E-49 T 15-10-2018 Trad_0904 b3cb114e6437ef5dcebf26413a6260ef 587 PRINTS PR00397 Sirohaem Fe-binding site signature 446 464 2.1E-8 T 15-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Trad_0904 b3cb114e6437ef5dcebf26413a6260ef 587 PRINTS PR00397 Sirohaem Fe-binding site signature 494 512 2.1E-8 T 15-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Trad_0904 b3cb114e6437ef5dcebf26413a6260ef 587 SUPERFAMILY SSF56014 445 580 2.62E-34 T 15-10-2018 Trad_0904 b3cb114e6437ef5dcebf26413a6260ef 587 Gene3D G3DSA:3.30.413.10 442 582 1.7E-33 T 15-10-2018 Trad_2766 9bb51932641bff7e9d9607a52b515f07 362 Gene3D G3DSA:1.10.3660.10 178 281 7.7E-29 T 15-10-2018 Trad_2766 9bb51932641bff7e9d9607a52b515f07 362 SUPERFAMILY SSF55021 291 344 8.59E-9 T 15-10-2018 Trad_2766 9bb51932641bff7e9d9607a52b515f07 362 Pfam PF01842 ACT domain 294 353 1.2E-9 T 15-10-2018 IPR002912 ACT domain Trad_2766 9bb51932641bff7e9d9607a52b515f07 362 Pfam PF02153 Prephenate dehydrogenase 23 262 1.7E-60 T 15-10-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 Trad_2766 9bb51932641bff7e9d9607a52b515f07 362 SUPERFAMILY SSF48179 174 280 3.97E-27 T 15-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Trad_2766 9bb51932641bff7e9d9607a52b515f07 362 Gene3D G3DSA:3.30.70.260 292 355 2.7E-8 T 15-10-2018 Trad_2766 9bb51932641bff7e9d9607a52b515f07 362 SUPERFAMILY SSF51735 10 169 4.6E-40 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_2766 9bb51932641bff7e9d9607a52b515f07 362 Gene3D G3DSA:3.40.50.720 8 177 1.7E-51 T 15-10-2018 Trad_0248 cc3ded6fdd57cd8357842c52daf7b023 847 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 219 229 - T 15-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site Trad_0248 cc3ded6fdd57cd8357842c52daf7b023 847 PRINTS PR00723 Subtilisin serine protease family (S8) signature 513 529 5.6E-20 T 15-10-2018 IPR015500 Peptidase S8, subtilisin-related Trad_0248 cc3ded6fdd57cd8357842c52daf7b023 847 PRINTS PR00723 Subtilisin serine protease family (S8) signature 215 228 5.6E-20 T 15-10-2018 IPR015500 Peptidase S8, subtilisin-related Trad_0248 cc3ded6fdd57cd8357842c52daf7b023 847 PRINTS PR00723 Subtilisin serine protease family (S8) signature 167 186 5.6E-20 T 15-10-2018 IPR015500 Peptidase S8, subtilisin-related Trad_0248 cc3ded6fdd57cd8357842c52daf7b023 847 Pfam PF06280 Fn3-like domain 592 696 1.1E-12 T 15-10-2018 IPR010435 Fn3-like domain GO:0004252|GO:0005618|GO:0016020 Trad_0248 cc3ded6fdd57cd8357842c52daf7b023 847 Gene3D G3DSA:2.60.40.1710 586 706 7.2E-8 T 15-10-2018 Trad_0248 cc3ded6fdd57cd8357842c52daf7b023 847 Pfam PF02225 PA domain 369 445 3.9E-13 T 15-10-2018 IPR003137 PA domain Trad_0248 cc3ded6fdd57cd8357842c52daf7b023 847 Gene3D G3DSA:3.50.30.30 347 468 2.7E-30 T 15-10-2018 Trad_0248 cc3ded6fdd57cd8357842c52daf7b023 847 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 172 183 - T 15-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site Trad_0248 cc3ded6fdd57cd8357842c52daf7b023 847 Pfam PF00082 Subtilase family 167 559 1.7E-56 T 15-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 Trad_0248 cc3ded6fdd57cd8357842c52daf7b023 847 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 514 524 - T 15-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site Trad_0248 cc3ded6fdd57cd8357842c52daf7b023 847 SUPERFAMILY SSF52743 147 584 1.09E-74 T 15-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Trad_0248 cc3ded6fdd57cd8357842c52daf7b023 847 SUPERFAMILY SSF52025 360 451 3.14E-15 T 15-10-2018 Trad_2210 b871f2da2e4e3828d89b0407aa09b1b1 175 SMART SM00852 21 164 2.1E-29 T 15-10-2018 IPR001453 MoaB/Mog domain Trad_2210 b871f2da2e4e3828d89b0407aa09b1b1 175 Pfam PF00994 Probable molybdopterin binding domain 21 163 5.2E-34 T 15-10-2018 IPR001453 MoaB/Mog domain Trad_2210 b871f2da2e4e3828d89b0407aa09b1b1 175 Gene3D G3DSA:3.40.980.10 11 171 9.7E-45 T 15-10-2018 IPR036425 MoaB/Mog-like domain superfamily Trad_2210 b871f2da2e4e3828d89b0407aa09b1b1 175 PIRSF PIRSF006443 4 172 4.1E-57 T 15-10-2018 IPR012245 Molybdenum cofactor biosynthesis protein MoaB GO:0006777 Trad_2210 b871f2da2e4e3828d89b0407aa09b1b1 175 SUPERFAMILY SSF53218 15 166 4.97E-41 T 15-10-2018 IPR036425 MoaB/Mog-like domain superfamily Trad_2210 b871f2da2e4e3828d89b0407aa09b1b1 175 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 19 158 3.6E-30 T 15-10-2018 IPR001453 MoaB/Mog domain Trad_0270 f9f4750ea6f79e54154f330949c0f365 393 Gene3D G3DSA:3.40.430.10 153 376 6.8E-65 T 15-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 Trad_0270 f9f4750ea6f79e54154f330949c0f365 393 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 16 371 3.4E-101 T 15-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 Trad_0270 f9f4750ea6f79e54154f330949c0f365 393 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 158 374 7.2E-52 T 15-10-2018 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 Trad_0270 f9f4750ea6f79e54154f330949c0f365 393 Gene3D G3DSA:3.40.140.10 4 152 2.6E-51 T 15-10-2018 Trad_0270 f9f4750ea6f79e54154f330949c0f365 393 Pfam PF01872 RibD C-terminal domain 159 358 8.1E-43 T 15-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 Trad_0270 f9f4750ea6f79e54154f330949c0f365 393 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 59 100 - T 15-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 Trad_0270 f9f4750ea6f79e54154f330949c0f365 393 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 11 111 3.3E-24 T 15-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain Trad_0270 f9f4750ea6f79e54154f330949c0f365 393 SUPERFAMILY SSF53597 157 373 2.14E-56 T 15-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 Trad_0270 f9f4750ea6f79e54154f330949c0f365 393 PIRSF PIRSF006769 8 377 3.4E-132 T 15-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 Trad_0270 f9f4750ea6f79e54154f330949c0f365 393 SUPERFAMILY SSF53927 12 152 5.52E-48 T 15-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 Trad_1583 0d4662b67c76d8dc161d7bf62d610cb2 128 Pfam PF01022 Bacterial regulatory protein, arsR family 49 95 9.8E-18 T 15-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Trad_1583 0d4662b67c76d8dc161d7bf62d610cb2 128 ProSitePatterns PS00846 Bacterial regulatory proteins, arsR family signature. 65 83 - T 15-10-2018 IPR018334 ArsR-type transcription regulator, HTH motif GO:0003700|GO:0005622|GO:0006355 Trad_1583 0d4662b67c76d8dc161d7bf62d610cb2 128 Gene3D G3DSA:1.10.10.10 9 127 4.9E-34 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Trad_1583 0d4662b67c76d8dc161d7bf62d610cb2 128 SUPERFAMILY SSF46785 34 121 1.79E-24 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Trad_1583 0d4662b67c76d8dc161d7bf62d610cb2 128 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 44 59 6.2E-19 T 15-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Trad_1583 0d4662b67c76d8dc161d7bf62d610cb2 128 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 91 106 6.2E-19 T 15-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Trad_1583 0d4662b67c76d8dc161d7bf62d610cb2 128 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 63 74 6.2E-19 T 15-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Trad_1583 0d4662b67c76d8dc161d7bf62d610cb2 128 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 76 91 6.2E-19 T 15-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Trad_1583 0d4662b67c76d8dc161d7bf62d610cb2 128 SMART SM00418 42 120 2.2E-26 T 15-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Trad_0121 9aeaf339400e618f8b8f7b59b113dfe6 453 Gene3D G3DSA:3.90.1150.10 12 433 1.4E-157 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Trad_0121 9aeaf339400e618f8b8f7b59b113dfe6 453 TIGRFAM TIGR00700 GABAtrnsam: 4-aminobutyrate transaminase 20 438 1.0E-160 T 15-10-2018 IPR004632 4-aminobutyrate aminotransferase, bacterial GO:0003867|GO:0009448 Trad_0121 9aeaf339400e618f8b8f7b59b113dfe6 453 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 254 291 - T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Trad_0121 9aeaf339400e618f8b8f7b59b113dfe6 453 Pfam PF00202 Aminotransferase class-III 34 436 2.2E-120 T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Trad_0121 9aeaf339400e618f8b8f7b59b113dfe6 453 Gene3D G3DSA:3.40.640.10 70 337 1.4E-157 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Trad_0121 9aeaf339400e618f8b8f7b59b113dfe6 453 PIRSF PIRSF000521 3 140 2.0E-7 T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Trad_0121 9aeaf339400e618f8b8f7b59b113dfe6 453 PIRSF PIRSF000521 134 440 2.5E-40 T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Trad_0121 9aeaf339400e618f8b8f7b59b113dfe6 453 SUPERFAMILY SSF53383 30 437 2.13E-129 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Trad_0100 3faac2d77f7849bb74358fd9c5e6a483 640 Gene3D G3DSA:3.40.50.720 162 290 5.5E-36 T 15-10-2018 Trad_0100 3faac2d77f7849bb74358fd9c5e6a483 640 Gene3D G3DSA:3.40.50.720 304 633 1.6E-112 T 15-10-2018 Trad_0100 3faac2d77f7849bb74358fd9c5e6a483 640 Pfam PF02719 Polysaccharide biosynthesis protein 309 594 5.9E-118 T 15-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain Trad_0100 3faac2d77f7849bb74358fd9c5e6a483 640 Pfam PF13727 CoA-binding domain 82 251 7.3E-20 T 15-10-2018 Trad_0100 3faac2d77f7849bb74358fd9c5e6a483 640 SUPERFAMILY SSF51735 307 572 5.57E-56 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_0100 3faac2d77f7849bb74358fd9c5e6a483 640 SUPERFAMILY SSF51735 165 296 1.5E-17 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_0642 ac54fc3f20698b2ea9fd4b8e22d85d20 181 Pfam PF00156 Phosphoribosyl transferase domain 10 150 3.1E-19 T 15-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 Trad_0642 ac54fc3f20698b2ea9fd4b8e22d85d20 181 SUPERFAMILY SSF53271 7 171 7.08E-43 T 15-10-2018 IPR029057 Phosphoribosyltransferase-like Trad_0642 ac54fc3f20698b2ea9fd4b8e22d85d20 181 Gene3D G3DSA:3.40.50.2020 4 180 7.9E-58 T 15-10-2018 Trad_0642 ac54fc3f20698b2ea9fd4b8e22d85d20 181 Hamap MF_01219 Bifunctional protein PyrR [pyrR]. 6 179 36.952 T 15-10-2018 IPR023050 Bifunctional protein PyrR KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 Trad_2215 b1ebc64310fdb1b1f205636a31d3cf7c 287 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 3 277 1.1E-133 T 15-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Trad_2215 b1ebc64310fdb1b1f205636a31d3cf7c 287 Gene3D G3DSA:1.20.58.180 206 282 1.3E-26 T 15-10-2018 Trad_2215 b1ebc64310fdb1b1f205636a31d3cf7c 287 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 1 281 52.463 T 15-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Trad_2215 b1ebc64310fdb1b1f205636a31d3cf7c 287 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 241 257 3.8E-59 T 15-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Trad_2215 b1ebc64310fdb1b1f205636a31d3cf7c 287 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 156 171 3.8E-59 T 15-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Trad_2215 b1ebc64310fdb1b1f205636a31d3cf7c 287 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 76 96 3.8E-59 T 15-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Trad_2215 b1ebc64310fdb1b1f205636a31d3cf7c 287 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 107 131 3.8E-59 T 15-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Trad_2215 b1ebc64310fdb1b1f205636a31d3cf7c 287 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 133 153 3.8E-59 T 15-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Trad_2215 b1ebc64310fdb1b1f205636a31d3cf7c 287 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 55 70 3.8E-59 T 15-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Trad_2215 b1ebc64310fdb1b1f205636a31d3cf7c 287 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 1 277 9.8E-128 T 15-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Trad_2215 b1ebc64310fdb1b1f205636a31d3cf7c 287 Gene3D G3DSA:3.30.930.10 1 204 7.1E-98 T 15-10-2018 Trad_2215 b1ebc64310fdb1b1f205636a31d3cf7c 287 SUPERFAMILY SSF55681 1 278 1.82E-112 T 15-10-2018 Trad_1379 55fd96c3540b7a792708491de649c475 265 Gene3D G3DSA:3.90.1560.10 1 230 1.6E-58 T 15-10-2018 IPR036702 ComB-like superfamily GO:0000287|GO:0050532 KEGG: 00680+3.1.3.71 Trad_1379 55fd96c3540b7a792708491de649c475 265 SUPERFAMILY SSF142823 11 224 4.18E-47 T 15-10-2018 IPR036702 ComB-like superfamily GO:0000287|GO:0050532 KEGG: 00680+3.1.3.71 Trad_1379 55fd96c3540b7a792708491de649c475 265 Pfam PF04029 2-phosphosulpholactate phosphatase 5 224 6.4E-57 T 15-10-2018 IPR005238 ComB-like GO:0000287|GO:0050532 KEGG: 00680+3.1.3.71 Trad_1801 97f24f27d4c81e928269025f3669144c 445 Pfam PF01547 Bacterial extracellular solute-binding protein 59 343 3.7E-26 T 15-10-2018 IPR006059 Bacterial extracellular solute-binding protein Trad_1801 97f24f27d4c81e928269025f3669144c 445 SUPERFAMILY SSF53850 17 430 4.24E-68 T 15-10-2018 Trad_1801 97f24f27d4c81e928269025f3669144c 445 Gene3D G3DSA:3.40.190.10 62 382 6.3E-87 T 15-10-2018 Trad_1801 97f24f27d4c81e928269025f3669144c 445 Gene3D G3DSA:3.40.190.10 148 422 6.3E-87 T 15-10-2018 Trad_0435 b589e4c431f98fe64420d42c0696c04e 307 PIRSF PIRSF005052 1 283 5.9E-95 T 15-10-2018 IPR005337 RapZ-like family GO:0005524 Trad_0435 b589e4c431f98fe64420d42c0696c04e 307 SUPERFAMILY SSF52540 3 153 1.03E-11 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_0435 b589e4c431f98fe64420d42c0696c04e 307 Gene3D G3DSA:3.40.50.300 1 167 2.2E-6 T 15-10-2018 Trad_0435 b589e4c431f98fe64420d42c0696c04e 307 Pfam PF03668 P-loop ATPase protein family 1 279 2.3E-77 T 15-10-2018 IPR005337 RapZ-like family GO:0005524 Trad_0435 b589e4c431f98fe64420d42c0696c04e 307 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 1 280 35.419 T 15-10-2018 IPR005337 RapZ-like family GO:0005524 Trad_2055 3553a2beb0aac983c519b99c1ec089fe 345 Pfam PF13439 Glycosyltransferase Family 4 32 152 4.0E-11 T 15-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Trad_2055 3553a2beb0aac983c519b99c1ec089fe 345 SUPERFAMILY SSF53756 19 343 4.04E-57 T 15-10-2018 Trad_2055 3553a2beb0aac983c519b99c1ec089fe 345 Gene3D G3DSA:3.40.50.2000 22 342 6.2E-93 T 15-10-2018 Trad_2055 3553a2beb0aac983c519b99c1ec089fe 345 Gene3D G3DSA:3.40.50.2000 164 336 6.2E-93 T 15-10-2018 Trad_2055 3553a2beb0aac983c519b99c1ec089fe 345 Pfam PF00534 Glycosyl transferases group 1 175 314 3.1E-23 T 15-10-2018 IPR001296 Glycosyl transferase, family 1 Trad_0107 ce46b11d8ce3da57f49520cbe27a1de2 554 Gene3D G3DSA:3.20.70.20 31 208 8.2E-41 T 15-10-2018 Trad_0107 ce46b11d8ce3da57f49520cbe27a1de2 554 Gene3D G3DSA:3.20.70.20 209 541 1.7E-82 T 15-10-2018 Trad_0107 ce46b11d8ce3da57f49520cbe27a1de2 554 SUPERFAMILY SSF51998 82 533 3.05E-108 T 15-10-2018 Trad_0107 ce46b11d8ce3da57f49520cbe27a1de2 554 PRINTS PR01183 Ribonucleotide reductase large chain signature 157 176 6.2E-15 T 15-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Trad_0107 ce46b11d8ce3da57f49520cbe27a1de2 554 PRINTS PR01183 Ribonucleotide reductase large chain signature 385 412 6.2E-15 T 15-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Trad_0107 ce46b11d8ce3da57f49520cbe27a1de2 554 PRINTS PR01183 Ribonucleotide reductase large chain signature 324 346 6.2E-15 T 15-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Trad_0107 ce46b11d8ce3da57f49520cbe27a1de2 554 Pfam PF02867 Ribonucleotide reductase, barrel domain 84 205 4.0E-28 T 15-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Trad_0107 ce46b11d8ce3da57f49520cbe27a1de2 554 Pfam PF02867 Ribonucleotide reductase, barrel domain 208 376 5.4E-24 T 15-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Trad_0107 ce46b11d8ce3da57f49520cbe27a1de2 554 Pfam PF02867 Ribonucleotide reductase, barrel domain 383 532 2.2E-28 T 15-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Trad_0107 ce46b11d8ce3da57f49520cbe27a1de2 554 TIGRFAM TIGR02510 NrdE-prime: ribonucleoside-diphosphate reductase, alpha chain 9 554 2.2E-243 T 15-10-2018 IPR013350 Ribonucleotide reductase alpha chain Trad_0007 c098f8a76ec8f4b0f411c1242e068093 282 Gene3D G3DSA:2.40.50.140 130 267 9.7E-36 T 15-10-2018 Trad_0007 c098f8a76ec8f4b0f411c1242e068093 282 Hamap MF_00984 Single-stranded DNA-binding protein. 132 238 26.124 T 15-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 Trad_0007 c098f8a76ec8f4b0f411c1242e068093 282 SUPERFAMILY SSF50249 132 282 9.71E-38 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold Trad_0007 c098f8a76ec8f4b0f411c1242e068093 282 Pfam PF00436 Single-strand binding protein family 5 107 3.9E-24 T 15-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 Trad_0007 c098f8a76ec8f4b0f411c1242e068093 282 Pfam PF00436 Single-strand binding protein family 132 232 9.8E-28 T 15-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 Trad_0007 c098f8a76ec8f4b0f411c1242e068093 282 SUPERFAMILY SSF50249 3 111 2.4E-28 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold Trad_0007 c098f8a76ec8f4b0f411c1242e068093 282 Gene3D G3DSA:2.40.50.140 1 129 3.7E-31 T 15-10-2018 Trad_0007 c098f8a76ec8f4b0f411c1242e068093 282 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 2 110 8.4E-26 T 15-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 Trad_0007 c098f8a76ec8f4b0f411c1242e068093 282 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 130 262 4.6E-31 T 15-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 Trad_0901 0a964cd18b777a96560c4863bd217faf 247 Gene3D G3DSA:3.40.50.1400 121 240 3.3E-29 T 15-10-2018 Trad_0901 0a964cd18b777a96560c4863bd217faf 247 Gene3D G3DSA:3.40.50.1400 2 120 6.5E-26 T 15-10-2018 Trad_0901 0a964cd18b777a96560c4863bd217faf 247 SUPERFAMILY SSF53800 124 237 6.05E-26 T 15-10-2018 Trad_0901 0a964cd18b777a96560c4863bd217faf 247 SUPERFAMILY SSF53800 2 162 4.32E-27 T 15-10-2018 Trad_0901 0a964cd18b777a96560c4863bd217faf 247 Pfam PF01903 CbiX 9 111 7.2E-21 T 15-10-2018 IPR002762 Cobalamin (vitamin B12) biosynthesis CbiX GO:0009236|GO:0016852 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 Trad_0901 0a964cd18b777a96560c4863bd217faf 247 Pfam PF01903 CbiX 131 233 2.2E-22 T 15-10-2018 IPR002762 Cobalamin (vitamin B12) biosynthesis CbiX GO:0009236|GO:0016852 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 Trad_0569 7852b765322a0281f718a7d377de19a0 258 SUPERFAMILY SSF52540 18 239 3.88E-58 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_0569 7852b765322a0281f718a7d377de19a0 258 Gene3D G3DSA:3.40.50.300 1 242 3.7E-63 T 15-10-2018 Trad_0569 7852b765322a0281f718a7d377de19a0 258 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Trad_0569 7852b765322a0281f718a7d377de19a0 258 Pfam PF00005 ABC transporter 22 169 1.5E-30 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Trad_0569 7852b765322a0281f718a7d377de19a0 258 SMART SM00382 31 235 7.4E-10 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_0407 569ceee9175c4549b346377772750d68 210 SMART SM00849 13 190 2.5E-40 T 15-10-2018 IPR001279 Metallo-beta-lactamase Trad_0407 569ceee9175c4549b346377772750d68 210 SUPERFAMILY SSF56281 13 207 3.52E-53 T 15-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Trad_0407 569ceee9175c4549b346377772750d68 210 Gene3D G3DSA:3.60.15.10 3 210 1.5E-69 T 15-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Trad_0407 569ceee9175c4549b346377772750d68 210 Pfam PF00753 Metallo-beta-lactamase superfamily 10 190 2.8E-27 T 15-10-2018 IPR001279 Metallo-beta-lactamase Trad_1939 c156fbac983638928ce080366e7ef329 332 Gene3D G3DSA:3.30.70.20 242 313 1.0E-12 T 15-10-2018 Trad_1939 c156fbac983638928ce080366e7ef329 332 Gene3D G3DSA:3.30.70.20 17 83 1.2E-10 T 15-10-2018 Trad_1939 c156fbac983638928ce080366e7ef329 332 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 284 295 - T 15-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Trad_1939 c156fbac983638928ce080366e7ef329 332 Pfam PF12838 4Fe-4S dicluster domain 247 297 4.9E-9 T 15-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Trad_1939 c156fbac983638928ce080366e7ef329 332 Pfam PF00037 4Fe-4S binding domain 52 74 1.5E-7 T 15-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Trad_1939 c156fbac983638928ce080366e7ef329 332 SUPERFAMILY SSF54862 242 304 4.76E-15 T 15-10-2018 Trad_1939 c156fbac983638928ce080366e7ef329 332 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 59 70 - T 15-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Trad_1939 c156fbac983638928ce080366e7ef329 332 SUPERFAMILY SSF54862 8 75 3.89E-14 T 15-10-2018 Trad_2151 ec1f4cf9de4b08fab7fd9e3048026356 313 Pfam PF14572 Phosphoribosyl synthetase-associated domain 206 311 6.7E-16 T 15-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 Trad_2151 ec1f4cf9de4b08fab7fd9e3048026356 313 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 7 311 7.9E-109 T 15-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 Trad_2151 ec1f4cf9de4b08fab7fd9e3048026356 313 SUPERFAMILY SSF53271 87 304 1.35E-39 T 15-10-2018 IPR029057 Phosphoribosyltransferase-like Trad_2151 ec1f4cf9de4b08fab7fd9e3048026356 313 Gene3D G3DSA:3.40.50.2020 9 299 6.7E-111 T 15-10-2018 Trad_2151 ec1f4cf9de4b08fab7fd9e3048026356 313 SMART SM01400 6 122 1.2E-73 T 15-10-2018 Trad_2151 ec1f4cf9de4b08fab7fd9e3048026356 313 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 6 122 7.8E-45 T 15-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 Trad_2151 ec1f4cf9de4b08fab7fd9e3048026356 313 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 130 145 - T 15-10-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 Trad_2151 ec1f4cf9de4b08fab7fd9e3048026356 313 SUPERFAMILY SSF53271 5 157 1.34E-51 T 15-10-2018 IPR029057 Phosphoribosyltransferase-like Trad_2151 ec1f4cf9de4b08fab7fd9e3048026356 313 Gene3D G3DSA:3.40.50.2020 149 288 6.7E-111 T 15-10-2018 Trad_1114 a79818c1ab2b15edd0b1c7b036b15cf4 185 SUPERFAMILY SSF50249 65 126 4.28E-19 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold Trad_1114 a79818c1ab2b15edd0b1c7b036b15cf4 185 Gene3D G3DSA:2.40.50.140 128 185 1.2E-27 T 15-10-2018 Trad_1114 a79818c1ab2b15edd0b1c7b036b15cf4 185 SUPERFAMILY SSF50249 129 185 8.0E-19 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold Trad_1114 a79818c1ab2b15edd0b1c7b036b15cf4 185 SMART SM00841 129 184 9.4E-33 T 15-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 Trad_1114 a79818c1ab2b15edd0b1c7b036b15cf4 185 SMART SM01185 67 121 6.8E-27 T 15-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 Trad_1114 a79818c1ab2b15edd0b1c7b036b15cf4 185 Gene3D G3DSA:2.40.50.140 64 127 3.6E-25 T 15-10-2018 Trad_1114 a79818c1ab2b15edd0b1c7b036b15cf4 185 SUPERFAMILY SSF50104 1 61 3.31E-17 T 15-10-2018 IPR008991 Translation protein SH3-like domain superfamily Trad_1114 a79818c1ab2b15edd0b1c7b036b15cf4 185 Pfam PF09285 Elongation factor P, C-terminal 129 184 5.3E-27 T 15-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 Trad_1114 a79818c1ab2b15edd0b1c7b036b15cf4 185 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 4 60 1.9E-20 T 15-10-2018 IPR013185 Translation elongation factor, KOW-like Trad_1114 a79818c1ab2b15edd0b1c7b036b15cf4 185 ProSitePatterns PS01275 Elongation factor P signature. 150 169 - T 15-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site Trad_1114 a79818c1ab2b15edd0b1c7b036b15cf4 185 PIRSF PIRSF005901 1 185 4.7E-70 T 15-10-2018 IPR020599 Translation elongation factor P/YeiP Trad_1114 a79818c1ab2b15edd0b1c7b036b15cf4 185 Hamap MF_00141 Elongation factor P [efp]. 1 185 47.935 T 15-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 Trad_1114 a79818c1ab2b15edd0b1c7b036b15cf4 185 Pfam PF01132 Elongation factor P (EF-P) OB domain 68 121 9.0E-24 T 15-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 Trad_1114 a79818c1ab2b15edd0b1c7b036b15cf4 185 Gene3D G3DSA:2.30.30.30 1 63 4.3E-27 T 15-10-2018 IPR014722 Ribosomal protein L2, domain 2 Trad_1114 a79818c1ab2b15edd0b1c7b036b15cf4 185 TIGRFAM TIGR00038 efp: translation elongation factor P 2 185 2.1E-74 T 15-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 Trad_0867 1e6b2865d4eeccfeeee76454308daa53 194 Gene3D G3DSA:3.90.420.10 19 193 1.7E-41 T 15-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 Trad_0867 1e6b2865d4eeccfeeee76454308daa53 194 Pfam PF00174 Oxidoreductase molybdopterin binding domain 31 176 2.7E-35 T 15-10-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 Trad_0867 1e6b2865d4eeccfeeee76454308daa53 194 SUPERFAMILY SSF56524 10 194 1.31E-55 T 15-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 Trad_1589 95b02dcc866029b47295933415fff2de 521 SUPERFAMILY SSF55874 339 501 4.85E-44 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Trad_1589 95b02dcc866029b47295933415fff2de 521 PRINTS PR00344 Bacterial sensor protein C-terminal signature 446 456 6.7E-19 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Trad_1589 95b02dcc866029b47295933415fff2de 521 PRINTS PR00344 Bacterial sensor protein C-terminal signature 463 481 6.7E-19 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Trad_1589 95b02dcc866029b47295933415fff2de 521 PRINTS PR00344 Bacterial sensor protein C-terminal signature 428 442 6.7E-19 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Trad_1589 95b02dcc866029b47295933415fff2de 521 PRINTS PR00344 Bacterial sensor protein C-terminal signature 487 500 6.7E-19 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Trad_1589 95b02dcc866029b47295933415fff2de 521 SUPERFAMILY SSF47384 267 350 2.16E-22 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Trad_1589 95b02dcc866029b47295933415fff2de 521 SMART SM00304 230 283 2.3E-15 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Trad_1589 95b02dcc866029b47295933415fff2de 521 SMART SM00388 284 350 5.4E-24 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Trad_1589 95b02dcc866029b47295933415fff2de 521 Pfam PF00512 His Kinase A (phospho-acceptor) domain 285 350 3.0E-20 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Trad_1589 95b02dcc866029b47295933415fff2de 521 SMART SM00387 393 503 8.6E-40 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Trad_1589 95b02dcc866029b47295933415fff2de 521 Gene3D G3DSA:1.10.287.130 234 350 5.1E-34 T 15-10-2018 Trad_1589 95b02dcc866029b47295933415fff2de 521 SUPERFAMILY SSF158472 231 282 8.11E-11 T 15-10-2018 Trad_1589 95b02dcc866029b47295933415fff2de 521 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 393 501 2.5E-27 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Trad_1589 95b02dcc866029b47295933415fff2de 521 Pfam PF00672 HAMP domain 231 280 2.1E-11 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Trad_1589 95b02dcc866029b47295933415fff2de 521 Gene3D G3DSA:3.30.565.10 356 501 1.4E-41 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Trad_0952 5620b8ba1f653208a13c97a535895d7a 648 SUPERFAMILY SSF82171 24 350 3.53E-15 T 15-10-2018 Trad_0952 5620b8ba1f653208a13c97a535895d7a 648 Gene3D G3DSA:2.120.10.30 2 182 1.6E-10 T 15-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like Trad_0952 5620b8ba1f653208a13c97a535895d7a 648 SUPERFAMILY SSF53474 356 618 8.81E-69 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold Trad_0952 5620b8ba1f653208a13c97a535895d7a 648 Gene3D G3DSA:3.40.50.1820 331 628 9.1E-80 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold Trad_0952 5620b8ba1f653208a13c97a535895d7a 648 Pfam PF00326 Prolyl oligopeptidase family 404 619 1.1E-42 T 15-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 Trad_2856 dbb63c485e088feb43858ed31898157c 451 Gene3D G3DSA:3.40.50.720 249 451 1.4E-69 T 15-10-2018 Trad_2856 dbb63c485e088feb43858ed31898157c 451 Gene3D G3DSA:3.40.50.720 1 196 6.4E-66 T 15-10-2018 Trad_2856 dbb63c485e088feb43858ed31898157c 451 SUPERFAMILY SSF52413 319 446 6.67E-34 T 15-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 Trad_2856 dbb63c485e088feb43858ed31898157c 451 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 180 2.8E-53 T 15-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 Trad_2856 dbb63c485e088feb43858ed31898157c 451 Gene3D G3DSA:1.20.5.100 218 248 1.8E-16 T 15-10-2018 Trad_2856 dbb63c485e088feb43858ed31898157c 451 SUPERFAMILY SSF51735 1 194 4.58E-49 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_2856 dbb63c485e088feb43858ed31898157c 451 SUPERFAMILY SSF48179 218 315 6.8E-32 T 15-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Trad_2856 dbb63c485e088feb43858ed31898157c 451 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 219 310 3.4E-36 T 15-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 Trad_2856 dbb63c485e088feb43858ed31898157c 451 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 334 436 8.2E-28 T 15-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 Trad_2856 dbb63c485e088feb43858ed31898157c 451 PIRSF PIRSF500134 1 451 1.4E-151 T 15-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 Trad_2856 dbb63c485e088feb43858ed31898157c 451 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 432 2.1E-123 T 15-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 Trad_2856 dbb63c485e088feb43858ed31898157c 451 SMART SM00984 333 436 5.6E-41 T 15-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 Trad_2856 dbb63c485e088feb43858ed31898157c 451 PIRSF PIRSF000124 1 451 1.3E-125 T 15-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 Trad_1850 a835d0a58d386916c9d2ea40b0d38f9c 355 SUPERFAMILY SSF52540 5 273 3.4E-62 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_1850 a835d0a58d386916c9d2ea40b0d38f9c 355 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 254 319 1.2E-16 T 15-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Trad_1850 a835d0a58d386916c9d2ea40b0d38f9c 355 Gene3D G3DSA:3.40.50.300 3 352 6.4E-92 T 15-10-2018 Trad_1850 a835d0a58d386916c9d2ea40b0d38f9c 355 Pfam PF00005 ABC transporter 26 201 1.1E-23 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Trad_1850 a835d0a58d386916c9d2ea40b0d38f9c 355 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 252 338 8.0E-21 T 15-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Trad_1850 a835d0a58d386916c9d2ea40b0d38f9c 355 SMART SM00382 34 251 1.9E-16 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_1850 a835d0a58d386916c9d2ea40b0d38f9c 355 ProSitePatterns PS00211 ABC transporters family signature. 174 188 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Trad_2782 b6bb1b5d608fd4990a3b5c824cd2e32d 279 Gene3D G3DSA:3.40.50.10320 28 272 6.4E-48 T 15-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 Trad_2782 b6bb1b5d608fd4990a3b5c824cd2e32d 279 SUPERFAMILY SSF102588 51 271 5.36E-39 T 15-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 Trad_2782 b6bb1b5d608fd4990a3b5c824cd2e32d 279 Pfam PF02585 GlcNAc-PI de-N-acetylase 54 175 2.2E-19 T 15-10-2018 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related Reactome: R-HSA-162710 Trad_1495 b1e7f97c7ca09f7f95d40ec3a2c87928 343 Gene3D G3DSA:1.10.760.10 215 343 3.6E-39 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Trad_1495 b1e7f97c7ca09f7f95d40ec3a2c87928 343 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 213 300 5.7E-11 T 15-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Trad_1495 b1e7f97c7ca09f7f95d40ec3a2c87928 343 SUPERFAMILY SSF49503 103 194 2.32E-23 T 15-10-2018 IPR008972 Cupredoxin Trad_1495 b1e7f97c7ca09f7f95d40ec3a2c87928 343 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 122 189 7.0E-8 T 15-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Trad_1495 b1e7f97c7ca09f7f95d40ec3a2c87928 343 SUPERFAMILY SSF46626 199 309 3.39E-22 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Trad_1495 b1e7f97c7ca09f7f95d40ec3a2c87928 343 Gene3D G3DSA:2.60.40.420 65 194 9.5E-30 T 15-10-2018 IPR008972 Cupredoxin Trad_2281 9c9f122b72647926864588aebc008532 313 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 120 302 4.2E-15 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Trad_2281 9c9f122b72647926864588aebc008532 313 SUPERFAMILY SSF161098 39 313 4.95E-63 T 15-10-2018 IPR035906 MetI-like superfamily Trad_2281 9c9f122b72647926864588aebc008532 313 Gene3D G3DSA:1.10.3720.10 37 300 1.3E-58 T 15-10-2018 IPR035906 MetI-like superfamily Trad_2606 30a16386089f82b5a13422bd2ef328b0 384 SUPERFAMILY SSF47384 135 217 4.51E-11 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Trad_2606 30a16386089f82b5a13422bd2ef328b0 384 SMART SM00387 261 372 2.6E-33 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Trad_2606 30a16386089f82b5a13422bd2ef328b0 384 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 262 370 3.9E-26 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Trad_2606 30a16386089f82b5a13422bd2ef328b0 384 Gene3D G3DSA:3.30.565.10 227 374 5.0E-39 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Trad_2606 30a16386089f82b5a13422bd2ef328b0 384 Gene3D G3DSA:1.10.287.130 113 214 1.9E-9 T 15-10-2018 Trad_2606 30a16386089f82b5a13422bd2ef328b0 384 SUPERFAMILY SSF55874 206 370 4.45E-39 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Trad_2606 30a16386089f82b5a13422bd2ef328b0 384 PRINTS PR00344 Bacterial sensor protein C-terminal signature 298 312 6.8E-14 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Trad_2606 30a16386089f82b5a13422bd2ef328b0 384 PRINTS PR00344 Bacterial sensor protein C-terminal signature 316 326 6.8E-14 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Trad_2606 30a16386089f82b5a13422bd2ef328b0 384 PRINTS PR00344 Bacterial sensor protein C-terminal signature 356 369 6.8E-14 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Trad_2606 30a16386089f82b5a13422bd2ef328b0 384 PRINTS PR00344 Bacterial sensor protein C-terminal signature 332 350 6.8E-14 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Trad_2606 30a16386089f82b5a13422bd2ef328b0 384 Pfam PF00512 His Kinase A (phospho-acceptor) domain 149 215 2.0E-6 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Trad_2606 30a16386089f82b5a13422bd2ef328b0 384 SMART SM00388 148 216 7.6E-6 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Trad_0303 adfbbd7a7aabf2b8639c996ed838032d 378 SUPERFAMILY SSF53383 4 360 6.79E-91 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Trad_0303 adfbbd7a7aabf2b8639c996ed838032d 378 PIRSF PIRSF000524 1 377 5.1E-110 T 15-10-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661|Reactome: R-HSA-9033241 Trad_0303 adfbbd7a7aabf2b8639c996ed838032d 378 Gene3D G3DSA:3.40.640.10 15 259 1.4E-117 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Trad_0303 adfbbd7a7aabf2b8639c996ed838032d 378 Pfam PF00266 Aminotransferase class-V 9 327 9.7E-33 T 15-10-2018 IPR000192 Aminotransferase class V domain Trad_0303 adfbbd7a7aabf2b8639c996ed838032d 378 Gene3D G3DSA:3.90.1150.10 10 369 1.4E-117 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Trad_0266 f7a144572d1c604e92e10993ab23a2db 315 Gene3D G3DSA:1.10.510.10 96 266 8.0E-43 T 15-10-2018 Trad_0266 f7a144572d1c604e92e10993ab23a2db 315 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 126 138 - T 15-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 Trad_0266 f7a144572d1c604e92e10993ab23a2db 315 SMART SM00220 11 264 1.5E-40 T 15-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Trad_0266 f7a144572d1c604e92e10993ab23a2db 315 PIRSF PIRSF000654 33 256 5.0E-24 T 15-10-2018 Trad_0266 f7a144572d1c604e92e10993ab23a2db 315 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 17 39 - T 15-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 Trad_0266 f7a144572d1c604e92e10993ab23a2db 315 Gene3D G3DSA:3.30.200.20 6 89 3.0E-13 T 15-10-2018 Trad_0266 f7a144572d1c604e92e10993ab23a2db 315 SUPERFAMILY SSF56112 10 261 8.34E-58 T 15-10-2018 IPR011009 Protein kinase-like domain superfamily Trad_0266 f7a144572d1c604e92e10993ab23a2db 315 Pfam PF00069 Protein kinase domain 11 254 5.4E-39 T 15-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Trad_0481 305e1e5ca7f427c251c1a792e8f577e5 270 SUPERFAMILY SSF53681 8 108 1.05E-33 T 15-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Trad_0481 305e1e5ca7f427c251c1a792e8f577e5 270 Pfam PF01177 Asp/Glu/Hydantoin racemase 9 211 1.6E-29 T 15-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Trad_0481 305e1e5ca7f427c251c1a792e8f577e5 270 Gene3D G3DSA:3.40.50.1860 98 205 3.4E-73 T 15-10-2018 Trad_0481 305e1e5ca7f427c251c1a792e8f577e5 270 Hamap MF_00258 Glutamate racemase [murI]. 7 254 32.483 T 15-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Trad_0481 305e1e5ca7f427c251c1a792e8f577e5 270 Gene3D G3DSA:3.40.50.1860 8 248 3.4E-73 T 15-10-2018 Trad_0481 305e1e5ca7f427c251c1a792e8f577e5 270 TIGRFAM TIGR00067 glut_race: glutamate racemase 10 234 5.3E-52 T 15-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Trad_0481 305e1e5ca7f427c251c1a792e8f577e5 270 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 73 81 - T 15-10-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Trad_0481 305e1e5ca7f427c251c1a792e8f577e5 270 SUPERFAMILY SSF53681 113 253 2.13E-32 T 15-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Trad_2721 0e944486c49f905d17dd64e552ba5403 456 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 356 440 1.6E-13 T 15-10-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain Trad_2721 0e944486c49f905d17dd64e552ba5403 456 Pfam PF01943 Polysaccharide biosynthesis protein 23 305 1.3E-19 T 15-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 Trad_0593 ed6a03ee2a59e9b72e8be1b6ced69f96 209 SUPERFAMILY SSF52096 10 196 2.22E-64 T 15-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Trad_0593 ed6a03ee2a59e9b72e8be1b6ced69f96 209 PRINTS PR00127 Clp protease catalytic subunit P signature 169 188 1.5E-46 T 15-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Trad_0593 ed6a03ee2a59e9b72e8be1b6ced69f96 209 PRINTS PR00127 Clp protease catalytic subunit P signature 19 34 1.5E-46 T 15-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Trad_0593 ed6a03ee2a59e9b72e8be1b6ced69f96 209 PRINTS PR00127 Clp protease catalytic subunit P signature 90 107 1.5E-46 T 15-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Trad_0593 ed6a03ee2a59e9b72e8be1b6ced69f96 209 PRINTS PR00127 Clp protease catalytic subunit P signature 59 79 1.5E-46 T 15-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Trad_0593 ed6a03ee2a59e9b72e8be1b6ced69f96 209 PRINTS PR00127 Clp protease catalytic subunit P signature 111 130 1.5E-46 T 15-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Trad_0593 ed6a03ee2a59e9b72e8be1b6ced69f96 209 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 3 194 38.804 T 15-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Trad_0593 ed6a03ee2a59e9b72e8be1b6ced69f96 209 Gene3D G3DSA:3.90.226.10 1 199 3.9E-73 T 15-10-2018 Trad_0593 ed6a03ee2a59e9b72e8be1b6ced69f96 209 Pfam PF00574 Clp protease 13 193 1.2E-73 T 15-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA Trad_2777 08dbb1913a68220058623a06e3f019db 903 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 29 475 6.2E-139 T 15-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Trad_2777 08dbb1913a68220058623a06e3f019db 903 SUPERFAMILY SSF81452 556 801 7.85E-56 T 15-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Trad_2777 08dbb1913a68220058623a06e3f019db 903 SUPERFAMILY SSF81442 16 522 4.06E-167 T 15-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Trad_2777 08dbb1913a68220058623a06e3f019db 903 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 22 523 1.5E-202 T 15-10-2018 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005886|GO:0015990|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 Trad_2777 08dbb1913a68220058623a06e3f019db 903 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 250 304 - T 15-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Trad_2777 08dbb1913a68220058623a06e3f019db 903 Gene3D G3DSA:1.10.287.70 538 612 1.3E-7 T 15-10-2018 Trad_2777 08dbb1913a68220058623a06e3f019db 903 PRINTS PR01165 Cytochrome c oxidase subunit I signature 94 118 5.8E-93 T 15-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Trad_2777 08dbb1913a68220058623a06e3f019db 903 PRINTS PR01165 Cytochrome c oxidase subunit I signature 136 148 5.8E-93 T 15-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Trad_2777 08dbb1913a68220058623a06e3f019db 903 PRINTS PR01165 Cytochrome c oxidase subunit I signature 353 371 5.8E-93 T 15-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Trad_2777 08dbb1913a68220058623a06e3f019db 903 PRINTS PR01165 Cytochrome c oxidase subunit I signature 318 339 5.8E-93 T 15-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Trad_2777 08dbb1913a68220058623a06e3f019db 903 PRINTS PR01165 Cytochrome c oxidase subunit I signature 381 400 5.8E-93 T 15-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Trad_2777 08dbb1913a68220058623a06e3f019db 903 PRINTS PR01165 Cytochrome c oxidase subunit I signature 431 452 5.8E-93 T 15-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Trad_2777 08dbb1913a68220058623a06e3f019db 903 PRINTS PR01165 Cytochrome c oxidase subunit I signature 248 269 5.8E-93 T 15-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Trad_2777 08dbb1913a68220058623a06e3f019db 903 PRINTS PR01165 Cytochrome c oxidase subunit I signature 67 90 5.8E-93 T 15-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Trad_2777 08dbb1913a68220058623a06e3f019db 903 PRINTS PR01165 Cytochrome c oxidase subunit I signature 294 309 5.8E-93 T 15-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Trad_2777 08dbb1913a68220058623a06e3f019db 903 PRINTS PR01165 Cytochrome c oxidase subunit I signature 168 186 5.8E-93 T 15-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Trad_2777 08dbb1913a68220058623a06e3f019db 903 PRINTS PR01165 Cytochrome c oxidase subunit I signature 20 45 5.8E-93 T 15-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Trad_2777 08dbb1913a68220058623a06e3f019db 903 PRINTS PR01165 Cytochrome c oxidase subunit I signature 197 216 5.8E-93 T 15-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Trad_2777 08dbb1913a68220058623a06e3f019db 903 Gene3D G3DSA:1.20.210.10 6 537 7.5E-196 T 15-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Trad_2777 08dbb1913a68220058623a06e3f019db 903 Gene3D G3DSA:1.20.120.80 618 801 1.9E-49 T 15-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Trad_2777 08dbb1913a68220058623a06e3f019db 903 Pfam PF00510 Cytochrome c oxidase subunit III 558 800 2.0E-30 T 15-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Trad_2814 71eea01e234c33dc203f9709629cb035 351 Pfam PF00591 Glycosyl transferase family, a/b domain 84 334 4.6E-90 T 15-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 Trad_2814 71eea01e234c33dc203f9709629cb035 351 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 13 344 37.518 T 15-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 Trad_2814 71eea01e234c33dc203f9709629cb035 351 SUPERFAMILY SSF52418 81 343 9.16E-88 T 15-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 Trad_2814 71eea01e234c33dc203f9709629cb035 351 Pfam PF02885 Glycosyl transferase family, helical bundle domain 15 74 5.4E-17 T 15-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 Trad_2814 71eea01e234c33dc203f9709629cb035 351 SUPERFAMILY SSF47648 10 77 4.58E-18 T 15-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 Trad_2814 71eea01e234c33dc203f9709629cb035 351 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 17 343 3.0E-118 T 15-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 Trad_2814 71eea01e234c33dc203f9709629cb035 351 Gene3D G3DSA:1.20.970.10 2 78 5.6E-21 T 15-10-2018 Trad_2814 71eea01e234c33dc203f9709629cb035 351 Gene3D G3DSA:3.40.1030.10 82 350 7.1E-99 T 15-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 Trad_0969 cc159adfcfeb589e41bb70e830a81da3 168 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 10 163 2.4E-32 T 15-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Trad_0969 cc159adfcfeb589e41bb70e830a81da3 168 SUPERFAMILY SSF53098 9 163 9.86E-36 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily Trad_0969 cc159adfcfeb589e41bb70e830a81da3 168 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 10 158 6.8E-41 T 15-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Trad_0969 cc159adfcfeb589e41bb70e830a81da3 168 Gene3D G3DSA:3.30.420.10 8 165 1.5E-44 T 15-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Trad_0969 cc159adfcfeb589e41bb70e830a81da3 168 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 8 161 36.801 T 15-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Trad_0969 cc159adfcfeb589e41bb70e830a81da3 168 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 11 24 8.8E-27 T 15-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Trad_0969 cc159adfcfeb589e41bb70e830a81da3 168 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 68 84 8.8E-27 T 15-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Trad_0969 cc159adfcfeb589e41bb70e830a81da3 168 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 90 106 8.8E-27 T 15-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Trad_0969 cc159adfcfeb589e41bb70e830a81da3 168 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 114 133 8.8E-27 T 15-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Trad_0969 cc159adfcfeb589e41bb70e830a81da3 168 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 146 158 8.8E-27 T 15-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Trad_1487 3a12d97b2bc440a57d5724df0fb24536 348 SUPERFAMILY SSF53822 70 347 4.52E-61 T 15-10-2018 IPR028082 Periplasmic binding protein-like I Trad_1487 3a12d97b2bc440a57d5724df0fb24536 348 SMART SM00354 11 81 4.8E-29 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Trad_1487 3a12d97b2bc440a57d5724df0fb24536 348 Gene3D G3DSA:3.40.50.2300 170 298 3.4E-74 T 15-10-2018 Trad_1487 3a12d97b2bc440a57d5724df0fb24536 348 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 8.2E-6 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Trad_1487 3a12d97b2bc440a57d5724df0fb24536 348 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 23 33 8.2E-6 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Trad_1487 3a12d97b2bc440a57d5724df0fb24536 348 Pfam PF13377 Periplasmic binding protein-like domain 179 343 5.7E-33 T 15-10-2018 Trad_1487 3a12d97b2bc440a57d5724df0fb24536 348 SUPERFAMILY SSF47413 10 69 1.55E-19 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Trad_1487 3a12d97b2bc440a57d5724df0fb24536 348 ProSitePatterns PS00356 LacI-type HTH domain signature. 14 32 - T 15-10-2018 Trad_1487 3a12d97b2bc440a57d5724df0fb24536 348 Pfam PF00356 Bacterial regulatory proteins, lacI family 13 58 1.7E-20 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Trad_1487 3a12d97b2bc440a57d5724df0fb24536 348 Gene3D G3DSA:1.10.260.40 3 68 1.0E-26 T 15-10-2018 Trad_1487 3a12d97b2bc440a57d5724df0fb24536 348 Gene3D G3DSA:3.40.50.2300 87 323 3.4E-74 T 15-10-2018 Trad_2983 f83e53425cdd8c3c1b0a65a56963ec22 191 TIGRFAM TIGR01958 nuoE_fam: NADH-quinone oxidoreductase, E subunit 19 163 8.0E-47 T 15-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Trad_2983 f83e53425cdd8c3c1b0a65a56963ec22 191 Gene3D G3DSA:1.10.10.1590 8 81 3.0E-24 T 15-10-2018 Trad_2983 f83e53425cdd8c3c1b0a65a56963ec22 191 PIRSF PIRSF000216 3 189 3.0E-57 T 15-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Trad_2983 f83e53425cdd8c3c1b0a65a56963ec22 191 Gene3D G3DSA:3.40.30.10 82 182 4.7E-27 T 15-10-2018 Trad_2983 f83e53425cdd8c3c1b0a65a56963ec22 191 SUPERFAMILY SSF52833 15 173 2.12E-47 T 15-10-2018 IPR036249 Thioredoxin-like superfamily Trad_2983 f83e53425cdd8c3c1b0a65a56963ec22 191 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 19 163 1.3E-48 T 15-10-2018 Trad_1527 55281679891d606046e5110bffe98679 507 Gene3D G3DSA:2.40.100.10 81 210 1.9E-49 T 15-10-2018 IPR029000 Cyclophilin-like domain superfamily Trad_1527 55281679891d606046e5110bffe98679 507 Gene3D G3DSA:3.30.1360.40 3 73 1.3E-13 T 15-10-2018 Trad_1527 55281679891d606046e5110bffe98679 507 Gene3D G3DSA:2.40.100.10 395 502 1.9E-35 T 15-10-2018 IPR029000 Cyclophilin-like domain superfamily Trad_1527 55281679891d606046e5110bffe98679 507 Pfam PF02626 Carboxyltransferase domain, subdomain A and B 253 501 1.6E-66 T 15-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B Trad_1527 55281679891d606046e5110bffe98679 507 SUPERFAMILY SSF50891 83 205 2.73E-36 T 15-10-2018 IPR029000 Cyclophilin-like domain superfamily Trad_1527 55281679891d606046e5110bffe98679 507 SMART SM00797 252 504 1.0E-72 T 15-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B Trad_1527 55281679891d606046e5110bffe98679 507 SUPERFAMILY SSF160467 15 87 5.89E-11 T 15-10-2018 Trad_1527 55281679891d606046e5110bffe98679 507 SUPERFAMILY SSF50891 420 502 3.41E-6 T 15-10-2018 IPR029000 Cyclophilin-like domain superfamily Trad_1527 55281679891d606046e5110bffe98679 507 SMART SM00796 1 194 3.4E-58 T 15-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D Trad_1527 55281679891d606046e5110bffe98679 507 Pfam PF02682 Carboxyltransferase domain, subdomain C and D 16 191 2.1E-58 T 15-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D Trad_2377 344e8a5c28fcf0ee8007aa8604127071 979 Gene3D G3DSA:1.10.290.10 297 423 5.4E-160 T 15-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 Trad_2377 344e8a5c28fcf0ee8007aa8604127071 979 Gene3D G3DSA:1.10.10.10 901 975 2.4E-6 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Trad_2377 344e8a5c28fcf0ee8007aa8604127071 979 Gene3D G3DSA:3.40.50.140 10 155 6.9E-58 T 15-10-2018 Trad_2377 344e8a5c28fcf0ee8007aa8604127071 979 SUPERFAMILY SSF88659 907 968 6.28E-9 T 15-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Trad_2377 344e8a5c28fcf0ee8007aa8604127071 979 SUPERFAMILY SSF56712 11 601 3.53E-174 T 15-10-2018 IPR023405 DNA topoisomerase, type IA, core domain Trad_2377 344e8a5c28fcf0ee8007aa8604127071 979 Pfam PF01131 DNA topoisomerase 149 591 2.9E-117 T 15-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Trad_2377 344e8a5c28fcf0ee8007aa8604127071 979 SMART SM00493 11 125 3.7E-36 T 15-10-2018 IPR006171 TOPRIM domain Trad_2377 344e8a5c28fcf0ee8007aa8604127071 979 SMART SM00437 289 555 6.0E-114 T 15-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 Trad_2377 344e8a5c28fcf0ee8007aa8604127071 979 SMART SM00436 125 213 1.1E-43 T 15-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 Trad_2377 344e8a5c28fcf0ee8007aa8604127071 979 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 13 641 2.8E-230 T 15-10-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 Trad_2377 344e8a5c28fcf0ee8007aa8604127071 979 Pfam PF13368 Topoisomerase C-terminal repeat 685 742 5.1E-12 T 15-10-2018 IPR025589 Topoisomerase C-terminal repeat Trad_2377 344e8a5c28fcf0ee8007aa8604127071 979 Pfam PF13368 Topoisomerase C-terminal repeat 805 854 1.6E-19 T 15-10-2018 IPR025589 Topoisomerase C-terminal repeat Trad_2377 344e8a5c28fcf0ee8007aa8604127071 979 Pfam PF13368 Topoisomerase C-terminal repeat 744 795 4.3E-21 T 15-10-2018 IPR025589 Topoisomerase C-terminal repeat Trad_2377 344e8a5c28fcf0ee8007aa8604127071 979 Gene3D G3DSA:1.10.460.10 156 595 5.4E-160 T 15-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 Trad_2377 344e8a5c28fcf0ee8007aa8604127071 979 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 183 201 1.7E-33 T 15-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Trad_2377 344e8a5c28fcf0ee8007aa8604127071 979 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 331 340 1.7E-33 T 15-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Trad_2377 344e8a5c28fcf0ee8007aa8604127071 979 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 518 532 1.7E-33 T 15-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Trad_2377 344e8a5c28fcf0ee8007aa8604127071 979 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 99 112 1.7E-33 T 15-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Trad_2377 344e8a5c28fcf0ee8007aa8604127071 979 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 408 424 1.7E-33 T 15-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Trad_2377 344e8a5c28fcf0ee8007aa8604127071 979 Gene3D G3DSA:2.70.20.10 205 502 5.4E-160 T 15-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 Trad_2377 344e8a5c28fcf0ee8007aa8604127071 979 Hamap MF_00952 DNA topoisomerase 1 [topA]. 11 765 51.861 T 15-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 Trad_2377 344e8a5c28fcf0ee8007aa8604127071 979 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 326 340 - T 15-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 Trad_2377 344e8a5c28fcf0ee8007aa8604127071 979 Pfam PF01751 Toprim domain 13 134 3.7E-25 T 15-10-2018 IPR006171 TOPRIM domain Trad_R0039 861e8532350ea5226695895a2756964c 486 SUPERFAMILY SSF52425 6 142 4.32E-36 T 15-10-2018 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily Reactome: R-HSA-400253 Trad_R0039 861e8532350ea5226695895a2756964c 486 PRINTS PR00147 DNA photolyase signature 308 324 6.1E-6 T 15-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 Trad_R0039 861e8532350ea5226695895a2756964c 486 PRINTS PR00147 DNA photolyase signature 328 346 6.1E-6 T 15-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 Trad_R0039 861e8532350ea5226695895a2756964c 486 Gene3D G3DSA:1.10.579.10 280 479 8.7E-62 T 15-10-2018 Trad_R0039 861e8532350ea5226695895a2756964c 486 Pfam PF00875 DNA photolyase 9 136 1.9E-24 T 15-10-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-400253 Trad_R0039 861e8532350ea5226695895a2756964c 486 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 308 320 - T 15-10-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal Trad_R0039 861e8532350ea5226695895a2756964c 486 Gene3D G3DSA:3.40.50.620 4 131 3.2E-30 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Trad_R0039 861e8532350ea5226695895a2756964c 486 Gene3D G3DSA:1.25.40.80 153 270 4.8E-14 T 15-10-2018 Trad_R0039 861e8532350ea5226695895a2756964c 486 Pfam PF03441 FAD binding domain of DNA photolyase 255 453 5.0E-55 T 15-10-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-400253 Trad_R0039 861e8532350ea5226695895a2756964c 486 SUPERFAMILY SSF48173 175 459 1.44E-72 T 15-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 Trad_2893 d8851db6087f86fcbcdca657e34c854f 276 Gene3D G3DSA:1.10.3720.10 2 268 2.0E-52 T 15-10-2018 IPR035906 MetI-like superfamily Trad_2893 d8851db6087f86fcbcdca657e34c854f 276 SUPERFAMILY SSF161098 5 276 1.26E-61 T 15-10-2018 IPR035906 MetI-like superfamily Trad_2893 d8851db6087f86fcbcdca657e34c854f 276 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 89 259 3.5E-20 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Trad_2562 5834e60cbd036b54658f1a36b7a75712 205 Pfam PF01121 Dephospho-CoA kinase 11 187 3.3E-53 T 15-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 Trad_2562 5834e60cbd036b54658f1a36b7a75712 205 Gene3D G3DSA:3.40.50.300 3 204 2.8E-68 T 15-10-2018 Trad_2562 5834e60cbd036b54658f1a36b7a75712 205 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 11 196 1.2E-41 T 15-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 Trad_2562 5834e60cbd036b54658f1a36b7a75712 205 SUPERFAMILY SSF52540 7 200 4.87E-38 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_2562 5834e60cbd036b54658f1a36b7a75712 205 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 8 205 26.276 T 15-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 Trad_2300 78047765b4e9b585df08c024a6815671 314 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 102 295 2.3E-16 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Trad_2300 78047765b4e9b585df08c024a6815671 314 SUPERFAMILY SSF161098 71 298 2.83E-43 T 15-10-2018 IPR035906 MetI-like superfamily Trad_2300 78047765b4e9b585df08c024a6815671 314 Gene3D G3DSA:1.10.3720.10 67 313 3.8E-53 T 15-10-2018 IPR035906 MetI-like superfamily Trad_2085 a95dac7cb3a5e38f8c50c5832b2369ca 336 PIRSF PIRSF005963 10 332 1.2E-141 T 15-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 Trad_2085 a95dac7cb3a5e38f8c50c5832b2369ca 336 Pfam PF04055 Radical SAM superfamily 97 258 3.8E-12 T 15-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Trad_2085 a95dac7cb3a5e38f8c50c5832b2369ca 336 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 36 78 1.4E-11 T 15-10-2018 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 Trad_2085 a95dac7cb3a5e38f8c50c5832b2369ca 336 Gene3D G3DSA:3.20.20.70 85 328 9.0E-24 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Trad_2085 a95dac7cb3a5e38f8c50c5832b2369ca 336 Hamap MF_00206 Lipoyl synthase [lipA]. 42 329 136.837 T 15-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 Trad_2085 a95dac7cb3a5e38f8c50c5832b2369ca 336 SUPERFAMILY SSF102114 55 318 6.67E-61 T 15-10-2018 Trad_2085 a95dac7cb3a5e38f8c50c5832b2369ca 336 TIGRFAM TIGR00510 lipA: lipoyl synthase 36 324 1.5E-117 T 15-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 Trad_2085 a95dac7cb3a5e38f8c50c5832b2369ca 336 SMART SM00729 89 296 2.3E-8 T 15-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Trad_2759 27e73d7159c899485d7f05cf1e7bb961 267 SUPERFAMILY SSF56655 5 257 3.14E-81 T 15-10-2018 Trad_2759 27e73d7159c899485d7f05cf1e7bb961 267 Gene3D G3DSA:3.40.190.80 142 264 4.1E-39 T 15-10-2018 Trad_2759 27e73d7159c899485d7f05cf1e7bb961 267 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 211 225 - T 15-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 Trad_2759 27e73d7159c899485d7f05cf1e7bb961 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 198 210 7.9E-7 T 15-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 Trad_2759 27e73d7159c899485d7f05cf1e7bb961 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 105 124 7.9E-7 T 15-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 Trad_2759 27e73d7159c899485d7f05cf1e7bb961 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 82 98 1.5E-52 T 15-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Trad_2759 27e73d7159c899485d7f05cf1e7bb961 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 131 154 1.5E-52 T 15-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Trad_2759 27e73d7159c899485d7f05cf1e7bb961 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 62 78 1.5E-52 T 15-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Trad_2759 27e73d7159c899485d7f05cf1e7bb961 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 177 198 1.5E-52 T 15-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Trad_2759 27e73d7159c899485d7f05cf1e7bb961 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 40 60 1.5E-52 T 15-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Trad_2759 27e73d7159c899485d7f05cf1e7bb961 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 208 232 1.5E-52 T 15-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Trad_2759 27e73d7159c899485d7f05cf1e7bb961 267 Pfam PF00459 Inositol monophosphatase family 8 255 1.2E-64 T 15-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Trad_2759 27e73d7159c899485d7f05cf1e7bb961 267 Gene3D G3DSA:3.30.540.10 2 140 4.6E-44 T 15-10-2018 Trad_2759 27e73d7159c899485d7f05cf1e7bb961 267 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 82 95 - T 15-10-2018 IPR020583 Inositol monophosphatase, metal-binding site Trad_0419 a188c1db97b06285eb13373ed7faf159 230 SUPERFAMILY SSF52540 6 220 1.12E-46 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_0419 a188c1db97b06285eb13373ed7faf159 230 Gene3D G3DSA:3.40.50.300 2 227 5.5E-48 T 15-10-2018 Trad_0419 a188c1db97b06285eb13373ed7faf159 230 SMART SM00382 31 212 1.9E-12 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_0419 a188c1db97b06285eb13373ed7faf159 230 Pfam PF00005 ABC transporter 22 163 2.3E-21 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Trad_0419 a188c1db97b06285eb13373ed7faf159 230 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 11 194 3.0E-40 T 15-10-2018 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004 Trad_0419 a188c1db97b06285eb13373ed7faf159 230 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Trad_2975 f849bdd00f04b69f1f35fc7c3a808022 495 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 4 467 4.5E-123 T 15-10-2018 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Trad_2975 f849bdd00f04b69f1f35fc7c3a808022 495 Pfam PF00361 Proton-conducting membrane transporter 115 401 6.7E-57 T 15-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Trad_2975 f849bdd00f04b69f1f35fc7c3a808022 495 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 121 140 6.7E-26 T 15-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Trad_2975 f849bdd00f04b69f1f35fc7c3a808022 495 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 151 175 6.7E-26 T 15-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Trad_2975 f849bdd00f04b69f1f35fc7c3a808022 495 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 312 331 6.7E-26 T 15-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Trad_2975 f849bdd00f04b69f1f35fc7c3a808022 495 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 224 248 6.7E-26 T 15-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Trad_2975 f849bdd00f04b69f1f35fc7c3a808022 495 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 364 390 6.7E-26 T 15-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Trad_0722 df711e32fc6ea8b2dd9762d5da0fe6d6 339 SUPERFAMILY SSF75005 23 322 3.14E-74 T 15-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily Trad_0722 df711e32fc6ea8b2dd9762d5da0fe6d6 339 Pfam PF04616 Glycosyl hydrolases family 43 29 321 3.0E-59 T 15-10-2018 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 Trad_0722 df711e32fc6ea8b2dd9762d5da0fe6d6 339 Gene3D G3DSA:2.115.10.20 35 322 1.4E-81 T 15-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily Trad_1460 37d4645426e9b1d0db700e44fc5de6bc 527 Gene3D G3DSA:3.50.50.60 230 354 7.7E-95 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Trad_1460 37d4645426e9b1d0db700e44fc5de6bc 527 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 348 362 6.9E-16 T 15-10-2018 Trad_1460 37d4645426e9b1d0db700e44fc5de6bc 527 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 123 145 6.9E-16 T 15-10-2018 Trad_1460 37d4645426e9b1d0db700e44fc5de6bc 527 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 389 396 6.9E-16 T 15-10-2018 Trad_1460 37d4645426e9b1d0db700e44fc5de6bc 527 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 262 287 6.9E-16 T 15-10-2018 Trad_1460 37d4645426e9b1d0db700e44fc5de6bc 527 SUPERFAMILY SSF50022 1 104 1.83E-29 T 15-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 Trad_1460 37d4645426e9b1d0db700e44fc5de6bc 527 Pfam PF00355 Rieske [2Fe-2S] domain 5 88 2.7E-17 T 15-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 Trad_1460 37d4645426e9b1d0db700e44fc5de6bc 527 SUPERFAMILY SSF55424 432 522 2.88E-21 T 15-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Trad_1460 37d4645426e9b1d0db700e44fc5de6bc 527 Gene3D G3DSA:3.30.390.30 438 526 1.1E-11 T 15-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Trad_1460 37d4645426e9b1d0db700e44fc5de6bc 527 Gene3D G3DSA:3.50.50.60 125 427 7.7E-95 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Trad_1460 37d4645426e9b1d0db700e44fc5de6bc 527 Pfam PF14759 Reductase C-terminal 438 517 2.7E-9 T 15-10-2018 IPR028202 Reductase, C-terminal Trad_1460 37d4645426e9b1d0db700e44fc5de6bc 527 SUPERFAMILY SSF51905 122 428 1.3E-41 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Trad_1460 37d4645426e9b1d0db700e44fc5de6bc 527 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 123 419 1.2E-52 T 15-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Trad_1460 37d4645426e9b1d0db700e44fc5de6bc 527 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 262 280 4.4E-16 T 15-10-2018 Trad_1460 37d4645426e9b1d0db700e44fc5de6bc 527 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 124 143 4.4E-16 T 15-10-2018 Trad_1460 37d4645426e9b1d0db700e44fc5de6bc 527 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 347 363 4.4E-16 T 15-10-2018 Trad_1460 37d4645426e9b1d0db700e44fc5de6bc 527 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 217 235 4.4E-16 T 15-10-2018 Trad_1460 37d4645426e9b1d0db700e44fc5de6bc 527 Gene3D G3DSA:2.102.10.10 1 104 1.0E-27 T 15-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 Trad_2387 d3f77fab75fd5067e9c82b3409fa4e66 701 SUPERFAMILY SSF158472 311 358 5.1E-6 T 15-10-2018 Trad_2387 d3f77fab75fd5067e9c82b3409fa4e66 701 SUPERFAMILY SSF55073 527 683 1.33E-48 T 15-10-2018 IPR029787 Nucleotide cyclase Trad_2387 d3f77fab75fd5067e9c82b3409fa4e66 701 Gene3D G3DSA:1.20.1440.210 40 149 1.3E-15 T 15-10-2018 Trad_2387 d3f77fab75fd5067e9c82b3409fa4e66 701 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 518 683 2.0E-56 T 15-10-2018 IPR000160 GGDEF domain Trad_2387 d3f77fab75fd5067e9c82b3409fa4e66 701 Pfam PF05227 CHASE3 domain 35 139 2.3E-19 T 15-10-2018 IPR007891 CHASE3 Trad_2387 d3f77fab75fd5067e9c82b3409fa4e66 701 Gene3D G3DSA:1.10.287.130 308 383 8.7E-7 T 15-10-2018 Trad_2387 d3f77fab75fd5067e9c82b3409fa4e66 701 SMART SM00065 368 519 5.8E-5 T 15-10-2018 IPR003018 GAF domain GO:0005515 Trad_2387 d3f77fab75fd5067e9c82b3409fa4e66 701 Gene3D G3DSA:3.30.450.40 384 524 9.4E-8 T 15-10-2018 IPR029016 GAF-like domain superfamily Trad_2387 d3f77fab75fd5067e9c82b3409fa4e66 701 SMART SM00304 309 361 2.8E-10 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Trad_2387 d3f77fab75fd5067e9c82b3409fa4e66 701 SUPERFAMILY SSF55781 358 517 4.36E-12 T 15-10-2018 Trad_2387 d3f77fab75fd5067e9c82b3409fa4e66 701 Pfam PF00990 Diguanylate cyclase, GGDEF domain 523 680 4.9E-47 T 15-10-2018 IPR000160 GGDEF domain Trad_2387 d3f77fab75fd5067e9c82b3409fa4e66 701 Gene3D G3DSA:3.30.70.270 525 687 6.6E-57 T 15-10-2018 Trad_2387 d3f77fab75fd5067e9c82b3409fa4e66 701 SMART SM00267 511 684 3.3E-63 T 15-10-2018 IPR000160 GGDEF domain Trad_2387 d3f77fab75fd5067e9c82b3409fa4e66 701 Pfam PF00672 HAMP domain 309 357 9.0E-9 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Trad_1077 a09d90aee3f47953aa783ee84abd0047 133 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 15 118 8.6E-37 T 15-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 Trad_1077 a09d90aee3f47953aa783ee84abd0047 133 Gene3D G3DSA:2.60.300.12 14 121 4.9E-36 T 15-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 Trad_1077 a09d90aee3f47953aa783ee84abd0047 133 SUPERFAMILY SSF89360 14 108 2.35E-28 T 15-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 Trad_1077 a09d90aee3f47953aa783ee84abd0047 133 Pfam PF01521 Iron-sulphur cluster biosynthesis 14 114 2.2E-19 T 15-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 Trad_1077 a09d90aee3f47953aa783ee84abd0047 133 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 100 117 - T 15-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 Trad_1181 c94cf907f71d09016bd428f906242ec4 320 ProSitePatterns PS00761 Signal peptidases I signature 3. 236 249 - T 15-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 Trad_1181 c94cf907f71d09016bd428f906242ec4 320 Gene3D G3DSA:2.10.109.10 211 280 4.2E-14 T 15-10-2018 Trad_1181 c94cf907f71d09016bd428f906242ec4 320 Pfam PF00717 Peptidase S24-like 71 144 8.3E-7 T 15-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C Trad_1181 c94cf907f71d09016bd428f906242ec4 320 SUPERFAMILY SSF51306 43 283 1.26E-38 T 15-10-2018 IPR036286 LexA/Signal peptidase-like superfamily Trad_1181 c94cf907f71d09016bd428f906242ec4 320 Gene3D G3DSA:2.10.109.10 40 187 1.2E-10 T 15-10-2018 Trad_1181 c94cf907f71d09016bd428f906242ec4 320 ProSitePatterns PS00501 Signal peptidases I serine active site. 53 60 - T 15-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 Trad_1181 c94cf907f71d09016bd428f906242ec4 320 ProSitePatterns PS00760 Signal peptidases I lysine active site. 123 135 - T 15-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 Trad_1181 c94cf907f71d09016bd428f906242ec4 320 Pfam PF10502 Signal peptidase, peptidase S26 227 272 4.5E-5 T 15-10-2018 IPR019533 Peptidase S26 Trad_1181 c94cf907f71d09016bd428f906242ec4 320 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 34 156 3.2E-16 T 15-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 Trad_1181 c94cf907f71d09016bd428f906242ec4 320 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 44 60 1.8E-15 T 15-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 Trad_1181 c94cf907f71d09016bd428f906242ec4 320 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 231 250 1.8E-15 T 15-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 Trad_1181 c94cf907f71d09016bd428f906242ec4 320 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 121 133 1.8E-15 T 15-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 Trad_2102 07b4ca6f86a3698c2693f6268003753f 410 Pfam PF13416 Bacterial extracellular solute-binding protein 40 340 9.7E-33 T 15-10-2018 IPR006059 Bacterial extracellular solute-binding protein Trad_2102 07b4ca6f86a3698c2693f6268003753f 410 Gene3D G3DSA:3.40.190.10 134 397 3.2E-71 T 15-10-2018 Trad_2102 07b4ca6f86a3698c2693f6268003753f 410 SUPERFAMILY SSF53850 28 407 7.25E-57 T 15-10-2018 Trad_2102 07b4ca6f86a3698c2693f6268003753f 410 Gene3D G3DSA:3.40.190.10 40 337 3.2E-71 T 15-10-2018 Trad_0329 ae3401002644360a35b87e63ede299ac 172 SUPERFAMILY SSF53254 8 148 8.14E-21 T 15-10-2018 IPR029033 Histidine phosphatase superfamily Trad_0329 ae3401002644360a35b87e63ede299ac 172 Gene3D G3DSA:3.40.50.1240 8 169 5.6E-32 T 15-10-2018 IPR029033 Histidine phosphatase superfamily Trad_0329 ae3401002644360a35b87e63ede299ac 172 SMART SM00855 8 122 1.1E-8 T 15-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Trad_0329 ae3401002644360a35b87e63ede299ac 172 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 9 77 1.4E-10 T 15-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Trad_1779 2a3a34861e657ad8d09c5aa077171a82 631 ProSitePatterns PS00211 ABC transporters family signature. 442 456 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Trad_1779 2a3a34861e657ad8d09c5aa077171a82 631 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Trad_1779 2a3a34861e657ad8d09c5aa077171a82 631 Pfam PF00005 ABC transporter 19 185 5.6E-25 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Trad_1779 2a3a34861e657ad8d09c5aa077171a82 631 SUPERFAMILY SSF52540 316 533 2.94E-42 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_1779 2a3a34861e657ad8d09c5aa077171a82 631 Pfam PF00005 ABC transporter 342 470 3.6E-19 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Trad_1779 2a3a34861e657ad8d09c5aa077171a82 631 SMART SM00382 28 232 2.7E-12 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_1779 2a3a34861e657ad8d09c5aa077171a82 631 SMART SM00382 350 515 2.6E-12 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_1779 2a3a34861e657ad8d09c5aa077171a82 631 Gene3D G3DSA:1.10.287.380 553 627 3.0E-5 T 15-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 Trad_1779 2a3a34861e657ad8d09c5aa077171a82 631 Pfam PF16326 ABC transporter C-terminal domain 561 624 1.8E-8 T 15-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 Trad_1779 2a3a34861e657ad8d09c5aa077171a82 631 Gene3D G3DSA:3.40.50.300 297 547 1.7E-51 T 15-10-2018 Trad_1779 2a3a34861e657ad8d09c5aa077171a82 631 Gene3D G3DSA:3.40.50.300 3 281 2.0E-56 T 15-10-2018 Trad_1779 2a3a34861e657ad8d09c5aa077171a82 631 SUPERFAMILY SSF52540 6 232 1.38E-43 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_1836 3387f225b1959a72d425e5773fb51093 383 Gene3D G3DSA:3.30.360.10 141 381 6.1E-67 T 15-10-2018 Trad_1836 3387f225b1959a72d425e5773fb51093 383 Gene3D G3DSA:3.40.50.720 1 140 1.9E-31 T 15-10-2018 Trad_1836 3387f225b1959a72d425e5773fb51093 383 SUPERFAMILY SSF51735 50 173 2.31E-27 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_1836 3387f225b1959a72d425e5773fb51093 383 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 34 135 8.1E-10 T 15-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 Trad_1836 3387f225b1959a72d425e5773fb51093 383 SUPERFAMILY SSF55347 146 345 3.6E-32 T 15-10-2018 Trad_0989 5f13406ea593a7d1f6d542568d3b9252 349 TIGRFAM TIGR00209 galT_1: galactose-1-phosphate uridylyltransferase 6 349 8.7E-146 T 15-10-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 Trad_0989 5f13406ea593a7d1f6d542568d3b9252 349 Gene3D G3DSA:3.30.428.10 45 176 5.1E-51 T 15-10-2018 IPR036265 HIT-like superfamily Trad_0989 5f13406ea593a7d1f6d542568d3b9252 349 Pfam PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain 184 348 1.3E-51 T 15-10-2018 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 Trad_0989 5f13406ea593a7d1f6d542568d3b9252 349 Pfam PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain 9 177 3.0E-59 T 15-10-2018 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 Trad_0989 5f13406ea593a7d1f6d542568d3b9252 349 PIRSF PIRSF000808 1 344 5.1E-110 T 15-10-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 Trad_0989 5f13406ea593a7d1f6d542568d3b9252 349 SUPERFAMILY SSF54197 6 178 9.87E-63 T 15-10-2018 IPR036265 HIT-like superfamily Trad_0989 5f13406ea593a7d1f6d542568d3b9252 349 Gene3D G3DSA:3.30.428.10 177 349 5.1E-65 T 15-10-2018 IPR036265 HIT-like superfamily Trad_0989 5f13406ea593a7d1f6d542568d3b9252 349 SUPERFAMILY SSF54197 180 347 8.97E-47 T 15-10-2018 IPR036265 HIT-like superfamily Trad_1206 7b313515a54a1e3eae15dfd9dcf67808 107 Pfam PF00462 Glutaredoxin 20 78 3.4E-14 T 15-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 Trad_1206 7b313515a54a1e3eae15dfd9dcf67808 107 Gene3D G3DSA:3.40.30.10 17 101 3.3E-21 T 15-10-2018 Trad_1206 7b313515a54a1e3eae15dfd9dcf67808 107 SUPERFAMILY SSF52833 19 92 1.67E-15 T 15-10-2018 IPR036249 Thioredoxin-like superfamily Trad_0983 f19dcae750e7bcf5790e4ff92fecfb51 221 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 2 210 38.647 T 15-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 Trad_0983 f19dcae750e7bcf5790e4ff92fecfb51 221 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 91 98 - T 15-10-2018 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 Trad_0983 f19dcae750e7bcf5790e4ff92fecfb51 221 Gene3D G3DSA:3.90.550.10 1 213 1.3E-64 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Trad_0983 f19dcae750e7bcf5790e4ff92fecfb51 221 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 5 209 2.3E-60 T 15-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 Trad_0983 f19dcae750e7bcf5790e4ff92fecfb51 221 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 3 208 1.7E-53 T 15-10-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 Trad_0983 f19dcae750e7bcf5790e4ff92fecfb51 221 SUPERFAMILY SSF53448 3 209 1.37E-48 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Trad_0993 1cb905e8e1a36e6c415b3fb080270139 511 Gene3D G3DSA:3.40.50.300 8 257 1.4E-61 T 15-10-2018 Trad_0993 1cb905e8e1a36e6c415b3fb080270139 511 SUPERFAMILY SSF52540 282 496 5.9E-44 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_0993 1cb905e8e1a36e6c415b3fb080270139 511 Pfam PF00005 ABC transporter 283 436 1.1E-19 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Trad_0993 1cb905e8e1a36e6c415b3fb080270139 511 Gene3D G3DSA:3.40.50.300 281 504 3.0E-41 T 15-10-2018 Trad_0993 1cb905e8e1a36e6c415b3fb080270139 511 SUPERFAMILY SSF52540 17 242 7.56E-60 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_0993 1cb905e8e1a36e6c415b3fb080270139 511 Pfam PF00005 ABC transporter 34 182 3.5E-31 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Trad_0993 1cb905e8e1a36e6c415b3fb080270139 511 ProSitePatterns PS00211 ABC transporters family signature. 409 423 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Trad_0993 1cb905e8e1a36e6c415b3fb080270139 511 SMART SM00382 43 231 4.4E-12 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_0993 1cb905e8e1a36e6c415b3fb080270139 511 SMART SM00382 291 485 8.8E-7 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_0175 5ae832181c624c5d1c2d2dee5a903e76 157 Gene3D G3DSA:3.40.30.10 2 154 5.5E-45 T 15-10-2018 Trad_0175 5ae832181c624c5d1c2d2dee5a903e76 157 PIRSF PIRSF000239 2 157 7.7E-30 T 15-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Trad_0175 5ae832181c624c5d1c2d2dee5a903e76 157 SUPERFAMILY SSF52833 6 154 2.37E-46 T 15-10-2018 IPR036249 Thioredoxin-like superfamily Trad_0175 5ae832181c624c5d1c2d2dee5a903e76 157 Pfam PF00578 AhpC/TSA family 9 133 2.1E-35 T 15-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Trad_2531 491a134d38c636950193cbccbc3d81e0 328 SUPERFAMILY SSF51430 1 322 7.46E-76 T 15-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Trad_2531 491a134d38c636950193cbccbc3d81e0 328 Pfam PF00248 Aldo/keto reductase family 16 316 1.1E-62 T 15-10-2018 IPR023210 NADP-dependent oxidoreductase domain Trad_2531 491a134d38c636950193cbccbc3d81e0 328 PRINTS PR00069 Aldo-keto reductase signature 106 124 3.4E-6 T 15-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Trad_2531 491a134d38c636950193cbccbc3d81e0 328 PRINTS PR00069 Aldo-keto reductase signature 138 155 3.4E-6 T 15-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Trad_2531 491a134d38c636950193cbccbc3d81e0 328 PRINTS PR00069 Aldo-keto reductase signature 42 66 3.4E-6 T 15-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Trad_2531 491a134d38c636950193cbccbc3d81e0 328 Gene3D G3DSA:3.20.20.100 1 326 2.1E-80 T 15-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Trad_0280 ec922c4295180c4e2c6e33b3fab02194 135 Pfam PF03965 Penicillinase repressor 11 127 1.3E-22 T 15-10-2018 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 Trad_0280 ec922c4295180c4e2c6e33b3fab02194 135 PIRSF PIRSF019455 6 135 8.7E-22 T 15-10-2018 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 Trad_0280 ec922c4295180c4e2c6e33b3fab02194 135 Gene3D G3DSA:1.10.10.10 6 76 1.1E-16 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Trad_0280 ec922c4295180c4e2c6e33b3fab02194 135 SUPERFAMILY SSF46785 8 127 1.27E-25 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Trad_2658 938d08c9d1aec9de8f4b677abb2a2667 353 Pfam PF13343 Bacterial extracellular solute-binding protein 76 310 2.3E-25 T 15-10-2018 Trad_2658 938d08c9d1aec9de8f4b677abb2a2667 353 Gene3D G3DSA:3.40.190.10 31 315 3.5E-104 T 15-10-2018 Trad_2658 938d08c9d1aec9de8f4b677abb2a2667 353 Gene3D G3DSA:3.40.190.10 126 340 3.5E-104 T 15-10-2018 Trad_2658 938d08c9d1aec9de8f4b677abb2a2667 353 SUPERFAMILY SSF53850 28 341 1.63E-55 T 15-10-2018 Trad_2658 938d08c9d1aec9de8f4b677abb2a2667 353 TIGRFAM TIGR01254 sfuA: ABC transporter periplasmic binding protein, thiB subfamily 25 339 1.5E-82 T 15-10-2018 IPR005948 Thiamine/thiamin pyrophosphate-binding periplasmic protein, ABC transporter GO:0015888|GO:0030975 Trad_1434 b87205c6299ce6a508ca6e8a13803d84 299 Gene3D G3DSA:3.10.310.10 8 284 3.1E-84 T 15-10-2018 Trad_1434 b87205c6299ce6a508ca6e8a13803d84 299 PIRSF PIRSF016184 1 293 1.0E-83 T 15-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 Trad_1434 b87205c6299ce6a508ca6e8a13803d84 299 Pfam PF02567 Phenazine biosynthesis-like protein 8 289 4.7E-61 T 15-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 Trad_1434 b87205c6299ce6a508ca6e8a13803d84 299 Gene3D G3DSA:3.10.310.10 124 282 3.1E-84 T 15-10-2018 Trad_1434 b87205c6299ce6a508ca6e8a13803d84 299 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 2 291 1.6E-61 T 15-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 Trad_1434 b87205c6299ce6a508ca6e8a13803d84 299 SUPERFAMILY SSF54506 1 293 1.18E-68 T 15-10-2018 Trad_2121 fc1bb3fd775d1e534bf3fe292162facc 835 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 238 414 6.1E-69 T 15-10-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 Trad_2121 fc1bb3fd775d1e534bf3fe292162facc 835 Gene3D G3DSA:2.30.210.10 598 612 1.0E-257 T 15-10-2018 Trad_2121 fc1bb3fd775d1e534bf3fe292162facc 835 SUPERFAMILY SSF52374 17 649 9.39E-138 T 15-10-2018 Trad_2121 fc1bb3fd775d1e534bf3fe292162facc 835 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 17 833 22.199 T 15-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Trad_2121 fc1bb3fd775d1e534bf3fe292162facc 835 Gene3D G3DSA:3.10.20.590 772 835 5.4E-21 T 15-10-2018 Trad_2121 fc1bb3fd775d1e534bf3fe292162facc 835 SUPERFAMILY SSF47323 644 834 1.59E-36 T 15-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Trad_2121 fc1bb3fd775d1e534bf3fe292162facc 835 Pfam PF08264 Anticodon-binding domain of tRNA 677 795 6.1E-19 T 15-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 Trad_2121 fc1bb3fd775d1e534bf3fe292162facc 835 Gene3D G3DSA:3.40.50.620 48 597 1.0E-257 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Trad_2121 fc1bb3fd775d1e534bf3fe292162facc 835 PRINTS PR00985 Leucyl-tRNA synthetase signature 231 250 5.6E-48 T 15-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Trad_2121 fc1bb3fd775d1e534bf3fe292162facc 835 PRINTS PR00985 Leucyl-tRNA synthetase signature 171 187 5.6E-48 T 15-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Trad_2121 fc1bb3fd775d1e534bf3fe292162facc 835 PRINTS PR00985 Leucyl-tRNA synthetase signature 203 216 5.6E-48 T 15-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Trad_2121 fc1bb3fd775d1e534bf3fe292162facc 835 PRINTS PR00985 Leucyl-tRNA synthetase signature 583 593 5.6E-48 T 15-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Trad_2121 fc1bb3fd775d1e534bf3fe292162facc 835 PRINTS PR00985 Leucyl-tRNA synthetase signature 550 572 5.6E-48 T 15-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Trad_2121 fc1bb3fd775d1e534bf3fe292162facc 835 PRINTS PR00985 Leucyl-tRNA synthetase signature 511 529 5.6E-48 T 15-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Trad_2121 fc1bb3fd775d1e534bf3fe292162facc 835 PRINTS PR00985 Leucyl-tRNA synthetase signature 145 162 5.6E-48 T 15-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Trad_2121 fc1bb3fd775d1e534bf3fe292162facc 835 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 18 833 3.3E-303 T 15-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Trad_2121 fc1bb3fd775d1e534bf3fe292162facc 835 SUPERFAMILY SSF50677 242 438 3.98E-53 T 15-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Trad_2121 fc1bb3fd775d1e534bf3fe292162facc 835 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 440 630 5.6E-21 T 15-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Trad_2121 fc1bb3fd775d1e534bf3fe292162facc 835 Gene3D G3DSA:1.10.730.10 624 770 9.7E-48 T 15-10-2018 Trad_2121 fc1bb3fd775d1e534bf3fe292162facc 835 Pfam PF09334 tRNA synthetases class I (M) 52 189 1.9E-16 T 15-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Trad_2121 fc1bb3fd775d1e534bf3fe292162facc 835 Gene3D G3DSA:3.90.740.10 244 438 1.0E-257 T 15-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Trad_1391 19e4a68a4c93ac7e42df6582786191ee 55 Gene3D G3DSA:2.20.28.160 9 55 2.0E-12 T 15-10-2018 Trad_1391 19e4a68a4c93ac7e42df6582786191ee 55 TIGRFAM TIGR01206 lysW: lysine biosynthesis protein LysW 18 55 9.8E-17 T 15-10-2018 IPR005906 Lysine biosynthesis protein LysW Trad_0328 6771e075ba6238a06995a00cd38db13d 371 Hamap MF_00456 Glutamate 5-kinase [proB]. 15 268 33.409 T 15-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Trad_0328 6771e075ba6238a06995a00cd38db13d 371 Pfam PF00696 Amino acid kinase family 16 241 2.1E-39 T 15-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 Trad_0328 6771e075ba6238a06995a00cd38db13d 371 SUPERFAMILY SSF88697 281 369 1.99E-20 T 15-10-2018 IPR015947 PUA-like superfamily Trad_0328 6771e075ba6238a06995a00cd38db13d 371 TIGRFAM TIGR01027 proB: glutamate 5-kinase 15 368 1.4E-114 T 15-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Trad_0328 6771e075ba6238a06995a00cd38db13d 371 SMART SM00359 281 362 5.6E-12 T 15-10-2018 IPR002478 PUA domain GO:0003723 Trad_0328 6771e075ba6238a06995a00cd38db13d 371 PRINTS PR00474 Glutamate 5-kinase family signature 216 236 5.9E-34 T 15-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Trad_0328 6771e075ba6238a06995a00cd38db13d 371 PRINTS PR00474 Glutamate 5-kinase family signature 124 145 5.9E-34 T 15-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Trad_0328 6771e075ba6238a06995a00cd38db13d 371 PRINTS PR00474 Glutamate 5-kinase family signature 53 67 5.9E-34 T 15-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Trad_0328 6771e075ba6238a06995a00cd38db13d 371 PRINTS PR00474 Glutamate 5-kinase family signature 156 183 5.9E-34 T 15-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Trad_0328 6771e075ba6238a06995a00cd38db13d 371 PIRSF PIRSF000729 11 371 2.9E-111 T 15-10-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 Trad_0328 6771e075ba6238a06995a00cd38db13d 371 Gene3D G3DSA:3.40.1160.10 9 269 2.3E-75 T 15-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Trad_0328 6771e075ba6238a06995a00cd38db13d 371 SUPERFAMILY SSF53633 14 260 4.19E-57 T 15-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Trad_0328 6771e075ba6238a06995a00cd38db13d 371 Gene3D G3DSA:2.30.130.10 271 370 4.7E-28 T 15-10-2018 IPR036974 PUA domain superfamily GO:0003723 Trad_0328 6771e075ba6238a06995a00cd38db13d 371 ProSitePatterns PS00902 Glutamate 5-kinase signature. 214 231 - T 15-10-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Trad_0328 6771e075ba6238a06995a00cd38db13d 371 Pfam PF01472 PUA domain 281 352 5.0E-16 T 15-10-2018 IPR002478 PUA domain GO:0003723 Trad_0845 a9f24aef00c7e754c9e1c118abdd2f62 309 SUPERFAMILY SSF161098 55 290 1.31E-49 T 15-10-2018 IPR035906 MetI-like superfamily Trad_0845 a9f24aef00c7e754c9e1c118abdd2f62 309 Gene3D G3DSA:1.10.3720.10 51 307 8.2E-58 T 15-10-2018 IPR035906 MetI-like superfamily Trad_0845 a9f24aef00c7e754c9e1c118abdd2f62 309 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 90 295 9.9E-15 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Trad_2172 a9190ea9c7637e515641aaba5a1b3f41 276 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 39 110 3.5E-7 T 15-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 Trad_2172 a9190ea9c7637e515641aaba5a1b3f41 276 Pfam PF00588 SpoU rRNA Methylase family 126 265 3.8E-32 T 15-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 Trad_2172 a9190ea9c7637e515641aaba5a1b3f41 276 Gene3D G3DSA:3.30.1330.30 11 112 6.1E-28 T 15-10-2018 IPR029064 50S ribosomal protein L30e-like Trad_2172 a9190ea9c7637e515641aaba5a1b3f41 276 SUPERFAMILY SSF75217 112 272 1.11E-41 T 15-10-2018 IPR029028 Alpha/beta knot methyltransferases Trad_2172 a9190ea9c7637e515641aaba5a1b3f41 276 SUPERFAMILY SSF55315 11 110 1.02E-19 T 15-10-2018 IPR029064 50S ribosomal protein L30e-like Trad_2172 a9190ea9c7637e515641aaba5a1b3f41 276 SMART SM00967 39 115 7.2E-8 T 15-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 Trad_2172 a9190ea9c7637e515641aaba5a1b3f41 276 Gene3D G3DSA:3.40.1280.10 121 275 2.7E-54 T 15-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Trad_1338 d4a553a0868f71c01a55abb5d53c05e7 578 Pfam PF02660 Glycerol-3-phosphate acyltransferase 16 194 4.3E-21 T 15-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 Trad_1338 d4a553a0868f71c01a55abb5d53c05e7 578 SMART SM01207 14 195 5.1E-8 T 15-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 Trad_1338 d4a553a0868f71c01a55abb5d53c05e7 578 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 372 487 4.4E-8 T 15-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase Trad_1338 d4a553a0868f71c01a55abb5d53c05e7 578 Gene3D G3DSA:3.40.50.720 359 491 7.8E-15 T 15-10-2018 Trad_1338 d4a553a0868f71c01a55abb5d53c05e7 578 SUPERFAMILY SSF51735 361 484 6.8E-13 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_0331 01ba9f101ecc32ecdcb78c9a5e52ef37 204 Pfam PF00717 Peptidase S24-like 111 178 8.9E-12 T 15-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C Trad_0331 01ba9f101ecc32ecdcb78c9a5e52ef37 204 Gene3D G3DSA:2.10.109.10 81 194 1.4E-23 T 15-10-2018 Trad_0331 01ba9f101ecc32ecdcb78c9a5e52ef37 204 Pfam PF01726 LexA DNA binding domain 1 56 1.0E-5 T 15-10-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 Trad_0331 01ba9f101ecc32ecdcb78c9a5e52ef37 204 Gene3D G3DSA:1.10.10.10 1 65 4.7E-6 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Trad_0331 01ba9f101ecc32ecdcb78c9a5e52ef37 204 SUPERFAMILY SSF46785 3 58 3.45E-5 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Trad_0331 01ba9f101ecc32ecdcb78c9a5e52ef37 204 SUPERFAMILY SSF51306 76 193 2.22E-23 T 15-10-2018 IPR036286 LexA/Signal peptidase-like superfamily Trad_1045 37d80ae50b1e9a7bd7c66697402e0960 141 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 82 93 - T 15-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Trad_1045 37d80ae50b1e9a7bd7c66697402e0960 141 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 38.98 T 15-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_1045 37d80ae50b1e9a7bd7c66697402e0960 141 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 59 70 - T 15-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Trad_1045 37d80ae50b1e9a7bd7c66697402e0960 141 PRINTS PR00060 Ribosomal protein L16 signature 58 87 3.9E-35 T 15-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_1045 37d80ae50b1e9a7bd7c66697402e0960 141 PRINTS PR00060 Ribosomal protein L16 signature 88 117 3.9E-35 T 15-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_1045 37d80ae50b1e9a7bd7c66697402e0960 141 PRINTS PR00060 Ribosomal protein L16 signature 42 53 3.9E-35 T 15-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_1045 37d80ae50b1e9a7bd7c66697402e0960 141 PRINTS PR00060 Ribosomal protein L16 signature 24 36 3.9E-35 T 15-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_1045 37d80ae50b1e9a7bd7c66697402e0960 141 SUPERFAMILY SSF54686 1 137 1.96E-57 T 15-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 Trad_1045 37d80ae50b1e9a7bd7c66697402e0960 141 Gene3D G3DSA:3.90.1170.10 1 141 1.3E-56 T 15-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 Trad_1045 37d80ae50b1e9a7bd7c66697402e0960 141 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 127 1.5E-59 T 15-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_1045 37d80ae50b1e9a7bd7c66697402e0960 141 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 4.6E-51 T 15-10-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 Trad_1504 c74ac22d5079a746f3a49b49d8f4a2fd 117 SUPERFAMILY SSF49472 1 117 7.72E-41 T 15-10-2018 IPR036817 Transthyretin/hydroxyisourate hydrolase domain superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 Trad_1504 c74ac22d5079a746f3a49b49d8f4a2fd 117 TIGRFAM TIGR02962 hdxy_isourate: hydroxyisourate hydrolase 2 117 4.2E-38 T 15-10-2018 IPR014306 Hydroxyisourate hydrolase GO:0006144|GO:0033971 KEGG: 00230+3.5.2.17|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 Trad_1504 c74ac22d5079a746f3a49b49d8f4a2fd 117 ProSitePatterns PS00769 Transthyretin signature 2. 100 112 - T 15-10-2018 IPR023419 Transthyretin, conserved site Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 Trad_1504 c74ac22d5079a746f3a49b49d8f4a2fd 117 ProSitePatterns PS00768 Transthyretin signature 1. 7 22 - T 15-10-2018 IPR023418 Transthyretin, thyroxine binding site Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 Trad_1504 c74ac22d5079a746f3a49b49d8f4a2fd 117 Gene3D G3DSA:2.60.40.180 1 117 3.9E-39 T 15-10-2018 IPR036817 Transthyretin/hydroxyisourate hydrolase domain superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 Trad_1504 c74ac22d5079a746f3a49b49d8f4a2fd 117 PRINTS PR00189 Transthyretin signature 3 23 3.1E-7 T 15-10-2018 IPR000895 Transthyretin/hydroxyisourate hydrolase Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 Trad_1504 c74ac22d5079a746f3a49b49d8f4a2fd 117 PRINTS PR00189 Transthyretin signature 95 117 3.1E-7 T 15-10-2018 IPR000895 Transthyretin/hydroxyisourate hydrolase Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 Trad_1504 c74ac22d5079a746f3a49b49d8f4a2fd 117 Pfam PF00576 HIUase/Transthyretin family 4 116 2.8E-33 T 15-10-2018 IPR023416 Transthyretin/hydroxyisourate hydrolase domain Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 Trad_2143 b34ec4448e0f98b24773d5b3c8c5ce75 849 SUPERFAMILY SSF48208 536 709 1.9E-7 T 15-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 Trad_2499 799f45a692ef577ed4e87d9ab8614b3a 375 SUPERFAMILY SSF51735 136 302 1.19E-51 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_2499 799f45a692ef577ed4e87d9ab8614b3a 375 Gene3D G3DSA:3.40.50.720 129 304 6.5E-140 T 15-10-2018 Trad_2499 799f45a692ef577ed4e87d9ab8614b3a 375 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 140 350 1.9E-86 T 15-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain Trad_2499 799f45a692ef577ed4e87d9ab8614b3a 375 SMART SM01002 148 296 7.1E-91 T 15-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain Trad_2499 799f45a692ef577ed4e87d9ab8614b3a 375 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 136 1.2E-44 T 15-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal Trad_2499 799f45a692ef577ed4e87d9ab8614b3a 375 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 172 197 - T 15-10-2018 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|Reactome: R-HSA-71403 Trad_2499 799f45a692ef577ed4e87d9ab8614b3a 375 SUPERFAMILY SSF52283 1 358 3.66E-65 T 15-10-2018 Trad_2499 799f45a692ef577ed4e87d9ab8614b3a 375 TIGRFAM TIGR00518 alaDH: alanine dehydrogenase 1 368 6.5E-168 T 15-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 Trad_2499 799f45a692ef577ed4e87d9ab8614b3a 375 PIRSF PIRSF000183 1 369 2.1E-173 T 15-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 Trad_2499 799f45a692ef577ed4e87d9ab8614b3a 375 Gene3D G3DSA:3.40.50.720 3 351 6.5E-140 T 15-10-2018 Trad_2499 799f45a692ef577ed4e87d9ab8614b3a 375 SMART SM01003 4 136 3.7E-74 T 15-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal Trad_1984 6c5f109d2e5f5149690b91e527f33466 391 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 387 8.9E-130 T 15-10-2018 IPR002155 Thiolase GO:0016747 Trad_1984 6c5f109d2e5f5149690b91e527f33466 391 SUPERFAMILY SSF53901 269 387 1.46E-38 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 Trad_1984 6c5f109d2e5f5149690b91e527f33466 391 Pfam PF00108 Thiolase, N-terminal domain 3 260 1.2E-93 T 15-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 Trad_1984 6c5f109d2e5f5149690b91e527f33466 391 ProSitePatterns PS00099 Thiolases active site. 371 384 - T 15-10-2018 IPR020610 Thiolase, active site GO:0016747 Trad_1984 6c5f109d2e5f5149690b91e527f33466 391 Gene3D G3DSA:3.40.47.10 125 386 5.7E-144 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 Trad_1984 6c5f109d2e5f5149690b91e527f33466 391 ProSitePatterns PS00737 Thiolases signature 2. 336 352 - T 15-10-2018 IPR020613 Thiolase, conserved site GO:0016747 Trad_1984 6c5f109d2e5f5149690b91e527f33466 391 Gene3D G3DSA:3.40.47.10 6 273 5.7E-144 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 Trad_1984 6c5f109d2e5f5149690b91e527f33466 391 PIRSF PIRSF000429 1 390 1.7E-114 T 15-10-2018 IPR002155 Thiolase GO:0016747 Trad_1984 6c5f109d2e5f5149690b91e527f33466 391 Pfam PF02803 Thiolase, C-terminal domain 268 387 1.8E-39 T 15-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 Trad_1984 6c5f109d2e5f5149690b91e527f33466 391 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 83 101 - T 15-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 Trad_1984 6c5f109d2e5f5149690b91e527f33466 391 SUPERFAMILY SSF53901 3 267 2.13E-83 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 Trad_0560 6f78cdb0a3ac7d678f9306da65f93ccd 210 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 5 194 7.8E-47 T 15-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 Trad_0560 6f78cdb0a3ac7d678f9306da65f93ccd 210 Pfam PF02660 Glycerol-3-phosphate acyltransferase 11 185 1.1E-44 T 15-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 Trad_0560 6f78cdb0a3ac7d678f9306da65f93ccd 210 SMART SM01207 10 186 1.2E-60 T 15-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 Trad_0560 6f78cdb0a3ac7d678f9306da65f93ccd 210 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 7 194 18.984 T 15-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 Trad_2139 2d7ae034f57c380cf9f97f9fc1521dc4 292 ProSitePatterns PS00730 AP endonucleases family 2 signature 2. 173 180 - T 15-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 Trad_2139 2d7ae034f57c380cf9f97f9fc1521dc4 292 Gene3D G3DSA:3.20.20.150 1 284 6.0E-95 T 15-10-2018 Trad_2139 2d7ae034f57c380cf9f97f9fc1521dc4 292 TIGRFAM TIGR00587 nfo: apurinic endonuclease (APN1) 3 266 1.3E-81 T 15-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 Trad_2139 2d7ae034f57c380cf9f97f9fc1521dc4 292 SUPERFAMILY SSF51658 4 275 6.15E-83 T 15-10-2018 IPR036237 Xylose isomerase-like superfamily Trad_2139 2d7ae034f57c380cf9f97f9fc1521dc4 292 Pfam PF01261 Xylose isomerase-like TIM barrel 19 236 8.8E-31 T 15-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain Trad_2139 2d7ae034f57c380cf9f97f9fc1521dc4 292 ProSitePatterns PS00731 AP endonucleases family 2 signature 3. 213 229 - T 15-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 Trad_2139 2d7ae034f57c380cf9f97f9fc1521dc4 292 Hamap MF_00152 Probable endonuclease 4 [nfo]. 2 280 39.635 T 15-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 Trad_2139 2d7ae034f57c380cf9f97f9fc1521dc4 292 SMART SM00518 3 280 1.3E-93 T 15-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 Trad_1577 a3799646b78d4c710f35e21b29841f8e 165 Pfam PF14279 HNH endonuclease 80 132 7.1E-16 T 15-10-2018 IPR029471 HNH endonuclease 5 Trad_1577 a3799646b78d4c710f35e21b29841f8e 165 Gene3D G3DSA:3.30.40.60 50 144 1.4E-23 T 15-10-2018 Trad_1577 a3799646b78d4c710f35e21b29841f8e 165 SMART SM00507 67 118 2.1E-13 T 15-10-2018 IPR003615 HNH nuclease Trad_2217 b6afc9b44099e9ce8c1b9a06122daa1c 448 Pfam PF13481 AAA domain 67 219 2.3E-15 T 15-10-2018 Trad_2217 b6afc9b44099e9ce8c1b9a06122daa1c 448 SUPERFAMILY SSF54211 250 445 1.67E-30 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Trad_2217 b6afc9b44099e9ce8c1b9a06122daa1c 448 Gene3D G3DSA:3.40.50.300 64 284 7.6E-38 T 15-10-2018 Trad_2217 b6afc9b44099e9ce8c1b9a06122daa1c 448 Hamap MF_01498 DNA repair protein RadA [radA]. 21 444 40.412 T 15-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 Trad_2217 b6afc9b44099e9ce8c1b9a06122daa1c 448 PRINTS PR01874 DNA repair protein radA signature 81 109 1.8E-72 T 15-10-2018 Trad_2217 b6afc9b44099e9ce8c1b9a06122daa1c 448 PRINTS PR01874 DNA repair protein radA signature 171 195 1.8E-72 T 15-10-2018 Trad_2217 b6afc9b44099e9ce8c1b9a06122daa1c 448 PRINTS PR01874 DNA repair protein radA signature 317 340 1.8E-72 T 15-10-2018 Trad_2217 b6afc9b44099e9ce8c1b9a06122daa1c 448 PRINTS PR01874 DNA repair protein radA signature 123 140 1.8E-72 T 15-10-2018 Trad_2217 b6afc9b44099e9ce8c1b9a06122daa1c 448 PRINTS PR01874 DNA repair protein radA signature 243 269 1.8E-72 T 15-10-2018 Trad_2217 b6afc9b44099e9ce8c1b9a06122daa1c 448 PRINTS PR01874 DNA repair protein radA signature 10 34 1.8E-72 T 15-10-2018 Trad_2217 b6afc9b44099e9ce8c1b9a06122daa1c 448 PRINTS PR01874 DNA repair protein radA signature 210 238 1.8E-72 T 15-10-2018 Trad_2217 b6afc9b44099e9ce8c1b9a06122daa1c 448 Gene3D G3DSA:3.30.230.10 320 447 9.4E-12 T 15-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Trad_2217 b6afc9b44099e9ce8c1b9a06122daa1c 448 SMART SM00382 89 241 3.0E-10 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_2217 b6afc9b44099e9ce8c1b9a06122daa1c 448 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 424 3.3E-139 T 15-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 Trad_2217 b6afc9b44099e9ce8c1b9a06122daa1c 448 SUPERFAMILY SSF52540 68 287 1.33E-44 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_2217 b6afc9b44099e9ce8c1b9a06122daa1c 448 Pfam PF13541 Subunit ChlI of Mg-chelatase 349 423 9.4E-9 T 15-10-2018 Trad_1881 39060fdb0a65ee966313713b10f44a05 517 SUPERFAMILY SSF53720 8 516 1.28E-152 T 15-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Trad_1881 39060fdb0a65ee966313713b10f44a05 517 Gene3D G3DSA:3.40.309.10 293 482 1.5E-175 T 15-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Trad_1881 39060fdb0a65ee966313713b10f44a05 517 Gene3D G3DSA:3.40.605.10 13 513 1.5E-175 T 15-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Trad_1881 39060fdb0a65ee966313713b10f44a05 517 Pfam PF00171 Aldehyde dehydrogenase family 54 513 1.3E-149 T 15-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Trad_1881 39060fdb0a65ee966313713b10f44a05 517 TIGRFAM TIGR01237 D1pyr5carbox2: putative delta-1-pyrroline-5-carboxylate dehydrogenase 7 517 1.7E-223 T 15-10-2018 IPR005932 Putative 1-pyrroline-5-carboxylate dehydrogenase, Bacillales KEGG: 00250+1.2.1.88|KEGG: 00330+1.2.1.88|MetaCyc: PWY-6853 Trad_1881 39060fdb0a65ee966313713b10f44a05 517 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 316 327 - T 15-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 Trad_1881 39060fdb0a65ee966313713b10f44a05 517 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 288 295 - T 15-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 Trad_0402 7705b242fae9d7cd63bc180049fa8cd5 385 PIRSF PIRSF006404 4 374 8.3E-108 T 15-10-2018 IPR016483 Uncharacterised conserved protein UCP006404, peptidase M50/CBS Trad_0402 7705b242fae9d7cd63bc180049fa8cd5 385 Pfam PF02163 Peptidase family M50 73 142 1.4E-7 T 15-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 Trad_0402 7705b242fae9d7cd63bc180049fa8cd5 385 Gene3D G3DSA:3.10.580.10 304 377 9.7E-15 T 15-10-2018 Trad_0402 7705b242fae9d7cd63bc180049fa8cd5 385 Pfam PF02163 Peptidase family M50 155 210 9.1E-7 T 15-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 Trad_0402 7705b242fae9d7cd63bc180049fa8cd5 385 SUPERFAMILY SSF54631 247 365 3.28E-29 T 15-10-2018 Trad_0402 7705b242fae9d7cd63bc180049fa8cd5 385 SMART SM00116 318 366 3.0E-9 T 15-10-2018 IPR000644 CBS domain Trad_0402 7705b242fae9d7cd63bc180049fa8cd5 385 SMART SM00116 260 307 0.068 T 15-10-2018 IPR000644 CBS domain Trad_0402 7705b242fae9d7cd63bc180049fa8cd5 385 Pfam PF00571 CBS domain 311 365 2.6E-11 T 15-10-2018 IPR000644 CBS domain Trad_0402 7705b242fae9d7cd63bc180049fa8cd5 385 Pfam PF00571 CBS domain 253 304 5.7E-11 T 15-10-2018 IPR000644 CBS domain Trad_0402 7705b242fae9d7cd63bc180049fa8cd5 385 Gene3D G3DSA:3.10.580.10 235 303 8.8E-11 T 15-10-2018 Trad_0125 bc098fb87d5e78ddd62fa64fe4cb73b5 303 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 298 8.0E-18 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Trad_0125 bc098fb87d5e78ddd62fa64fe4cb73b5 303 Gene3D G3DSA:1.10.3720.10 32 301 5.0E-57 T 15-10-2018 IPR035906 MetI-like superfamily Trad_0125 bc098fb87d5e78ddd62fa64fe4cb73b5 303 SUPERFAMILY SSF161098 28 299 1.96E-56 T 15-10-2018 IPR035906 MetI-like superfamily Trad_0132 52363482efe3b7d00d9a2ed8051e9375 1103 PRINTS PR00110 Alpha-amylase signature 514 526 4.7E-6 T 15-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 Trad_0132 52363482efe3b7d00d9a2ed8051e9375 1103 PRINTS PR00110 Alpha-amylase signature 347 358 4.7E-6 T 15-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 Trad_0132 52363482efe3b7d00d9a2ed8051e9375 1103 PRINTS PR00110 Alpha-amylase signature 420 431 4.7E-6 T 15-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 Trad_0132 52363482efe3b7d00d9a2ed8051e9375 1103 Gene3D G3DSA:3.20.20.80 214 609 6.2E-99 T 15-10-2018 Trad_0132 52363482efe3b7d00d9a2ed8051e9375 1103 Gene3D G3DSA:2.60.40.1190 901 1081 2.7E-5 T 15-10-2018 Trad_0132 52363482efe3b7d00d9a2ed8051e9375 1103 Pfam PF00128 Alpha amylase, catalytic domain 264 364 5.1E-24 T 15-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Trad_0132 52363482efe3b7d00d9a2ed8051e9375 1103 Pfam PF00128 Alpha amylase, catalytic domain 385 576 1.3E-21 T 15-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Trad_0132 52363482efe3b7d00d9a2ed8051e9375 1103 SUPERFAMILY SSF51445 213 614 4.16E-84 T 15-10-2018 IPR017853 Glycoside hydrolase superfamily Trad_0132 52363482efe3b7d00d9a2ed8051e9375 1103 SUPERFAMILY SSF49344 903 1066 1.45E-10 T 15-10-2018 Trad_0132 52363482efe3b7d00d9a2ed8051e9375 1103 SMART SM00642 225 608 1.1E-64 T 15-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Trad_2812 57e26525bf7b7cc9d3ad64a13e16b4fc 312 ProSitePatterns PS01235 PdxS/SNZ family signature. 212 230 - T 15-10-2018 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 Trad_2812 57e26525bf7b7cc9d3ad64a13e16b4fc 312 TIGRFAM TIGR00343 TIGR00343: pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 16 312 2.9E-145 T 15-10-2018 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 Trad_2812 57e26525bf7b7cc9d3ad64a13e16b4fc 312 Pfam PF01680 SOR/SNZ family 14 219 2.7E-110 T 15-10-2018 IPR033755 PdxS/SNZ N-terminal domain KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 Trad_2812 57e26525bf7b7cc9d3ad64a13e16b4fc 312 Gene3D G3DSA:3.20.20.70 8 312 4.7E-147 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Trad_2812 57e26525bf7b7cc9d3ad64a13e16b4fc 312 Hamap MF_01824 Pyridoxal 5'-phosphate synthase subunit PdxS [pdxS]. 11 312 50.794 T 15-10-2018 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 Trad_2812 57e26525bf7b7cc9d3ad64a13e16b4fc 312 PIRSF PIRSF029271 3 312 1.9E-148 T 15-10-2018 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 Trad_2812 57e26525bf7b7cc9d3ad64a13e16b4fc 312 SUPERFAMILY SSF51366 25 287 2.31E-63 T 15-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Trad_0664 0c6617e334e32f75315ec24542325f74 333 ProSitePatterns PS00356 LacI-type HTH domain signature. 6 24 - T 15-10-2018 Trad_0664 0c6617e334e32f75315ec24542325f74 333 Pfam PF00356 Bacterial regulatory proteins, lacI family 5 50 2.0E-19 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Trad_0664 0c6617e334e32f75315ec24542325f74 333 Gene3D G3DSA:1.10.260.40 1 56 4.3E-24 T 15-10-2018 Trad_0664 0c6617e334e32f75315ec24542325f74 333 Pfam PF13377 Periplasmic binding protein-like domain 170 331 6.7E-37 T 15-10-2018 Trad_0664 0c6617e334e32f75315ec24542325f74 333 SUPERFAMILY SSF47413 2 61 4.66E-18 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Trad_0664 0c6617e334e32f75315ec24542325f74 333 SMART SM00354 3 73 1.0E-33 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Trad_0664 0c6617e334e32f75315ec24542325f74 333 Gene3D G3DSA:3.40.50.2300 57 308 8.1E-76 T 15-10-2018 Trad_0664 0c6617e334e32f75315ec24542325f74 333 Gene3D G3DSA:3.40.50.2300 162 291 8.1E-76 T 15-10-2018 Trad_0664 0c6617e334e32f75315ec24542325f74 333 SUPERFAMILY SSF53822 62 332 1.02E-70 T 15-10-2018 IPR028082 Periplasmic binding protein-like I Trad_0980 3296db3675b7be4c0d53e73e7a3e8eb4 354 SUPERFAMILY SSF50965 145 340 5.62E-28 T 15-10-2018 IPR011043 Galactose oxidase/kelch, beta-propeller Trad_0980 3296db3675b7be4c0d53e73e7a3e8eb4 354 Pfam PF13964 Kelch motif 273 318 5.2E-7 T 15-10-2018 Trad_0980 3296db3675b7be4c0d53e73e7a3e8eb4 354 Pfam PF13964 Kelch motif 111 165 9.3E-6 T 15-10-2018 Trad_0980 3296db3675b7be4c0d53e73e7a3e8eb4 354 SUPERFAMILY SSF117281 48 197 1.57E-29 T 15-10-2018 IPR015915 Kelch-type beta propeller GO:0005515 Trad_0980 3296db3675b7be4c0d53e73e7a3e8eb4 354 SMART SM00612 70 119 5.6E-4 T 15-10-2018 IPR006652 Kelch repeat type 1 GO:0005515 Trad_0980 3296db3675b7be4c0d53e73e7a3e8eb4 354 SMART SM00612 230 283 0.14 T 15-10-2018 IPR006652 Kelch repeat type 1 GO:0005515 Trad_0980 3296db3675b7be4c0d53e73e7a3e8eb4 354 SMART SM00612 120 175 0.058 T 15-10-2018 IPR006652 Kelch repeat type 1 GO:0005515 Trad_0980 3296db3675b7be4c0d53e73e7a3e8eb4 354 SMART SM00612 284 331 6.1 T 15-10-2018 IPR006652 Kelch repeat type 1 GO:0005515 Trad_0980 3296db3675b7be4c0d53e73e7a3e8eb4 354 Pfam PF01344 Kelch motif 62 104 3.0E-9 T 15-10-2018 IPR006652 Kelch repeat type 1 GO:0005515 Trad_0980 3296db3675b7be4c0d53e73e7a3e8eb4 354 Pfam PF01344 Kelch motif 218 268 1.3E-7 T 15-10-2018 IPR006652 Kelch repeat type 1 GO:0005515 Trad_0980 3296db3675b7be4c0d53e73e7a3e8eb4 354 Gene3D G3DSA:2.120.10.80 196 351 4.0E-33 T 15-10-2018 IPR015915 Kelch-type beta propeller GO:0005515 Trad_0980 3296db3675b7be4c0d53e73e7a3e8eb4 354 Gene3D G3DSA:2.120.10.80 28 195 7.6E-31 T 15-10-2018 IPR015915 Kelch-type beta propeller GO:0005515 Trad_0316 df458d76904d9f8e1aaa71817456dea6 954 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 737 770 1.2E-7 T 15-10-2018 IPR001451 Hexapeptide repeat Trad_0316 df458d76904d9f8e1aaa71817456dea6 954 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 832 867 4.7E-8 T 15-10-2018 IPR001451 Hexapeptide repeat Trad_0316 df458d76904d9f8e1aaa71817456dea6 954 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 615 935 30.95 T 15-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 Trad_0316 df458d76904d9f8e1aaa71817456dea6 954 SUPERFAMILY SSF51161 680 926 1.33E-73 T 15-10-2018 IPR011004 Trimeric LpxA-like superfamily Trad_0316 df458d76904d9f8e1aaa71817456dea6 954 Gene3D G3DSA:2.160.10.10 710 919 1.7E-62 T 15-10-2018 Trad_0316 df458d76904d9f8e1aaa71817456dea6 954 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 877 905 - T 15-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 Trad_0316 df458d76904d9f8e1aaa71817456dea6 954 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 614 931 5.7E-89 T 15-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 Trad_1608 c7bf9660397746a49a8cbe02827763bc 289 SUPERFAMILY SSF56176 8 190 3.27E-29 T 15-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Trad_1608 c7bf9660397746a49a8cbe02827763bc 289 Pfam PF01565 FAD binding domain 32 143 1.2E-12 T 15-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 Trad_1608 c7bf9660397746a49a8cbe02827763bc 289 SUPERFAMILY SSF56194 186 278 2.09E-26 T 15-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Trad_1608 c7bf9660397746a49a8cbe02827763bc 289 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 9 264 1.7E-46 T 15-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Trad_1608 c7bf9660397746a49a8cbe02827763bc 289 Gene3D G3DSA:3.30.43.10 2 68 2.0E-20 T 15-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 Trad_1608 c7bf9660397746a49a8cbe02827763bc 289 Gene3D G3DSA:3.30.465.10 80 198 3.3E-33 T 15-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 Trad_1608 c7bf9660397746a49a8cbe02827763bc 289 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 289 66.086 T 15-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Trad_1608 c7bf9660397746a49a8cbe02827763bc 289 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 184 272 1.3E-20 T 15-10-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Trad_1608 c7bf9660397746a49a8cbe02827763bc 289 Gene3D G3DSA:3.90.78.10 199 277 3.4E-31 T 15-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Trad_1670 f3bdcad511ef4442b3bf8937f4dd5067 347 Gene3D G3DSA:3.40.50.10770 26 173 2.0E-31 T 15-10-2018 Trad_1670 f3bdcad511ef4442b3bf8937f4dd5067 347 TIGRFAM TIGR02619 TIGR02619: putative CRISPR-associated protein, APE2256 family 29 168 1.4E-24 T 15-10-2018 IPR013442 CRISPR-associated protein APE2256 Trad_1670 f3bdcad511ef4442b3bf8937f4dd5067 347 Pfam PF09651 CRISPR-associated protein (Cas_APE2256) 40 168 2.9E-33 T 15-10-2018 IPR013442 CRISPR-associated protein APE2256 Trad_0995 d9df0f76cabe0007f531636b3bf3cdfd 494 TIGRFAM TIGR01312 XylB: xylulokinase 3 475 1.1E-117 T 15-10-2018 IPR006000 Xylulokinase GO:0004856|GO:0005997 KEGG: 00040+2.7.1.17 Trad_0995 d9df0f76cabe0007f531636b3bf3cdfd 494 SUPERFAMILY SSF53067 244 481 7.2E-52 T 15-10-2018 Trad_0995 d9df0f76cabe0007f531636b3bf3cdfd 494 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 2 242 9.5E-55 T 15-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 Trad_0995 d9df0f76cabe0007f531636b3bf3cdfd 494 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 253 435 1.6E-28 T 15-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 Trad_0995 d9df0f76cabe0007f531636b3bf3cdfd 494 PIRSF PIRSF000538 1 488 1.1E-136 T 15-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 Trad_0995 d9df0f76cabe0007f531636b3bf3cdfd 494 Gene3D G3DSA:3.30.420.40 1 242 9.5E-79 T 15-10-2018 Trad_0995 d9df0f76cabe0007f531636b3bf3cdfd 494 SUPERFAMILY SSF53067 2 244 7.08E-65 T 15-10-2018 Trad_0995 d9df0f76cabe0007f531636b3bf3cdfd 494 Gene3D G3DSA:3.30.420.40 244 482 8.3E-60 T 15-10-2018 Trad_0995 d9df0f76cabe0007f531636b3bf3cdfd 494 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 351 371 - T 15-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 Trad_0271 f0d6c08e25c7d0f5cd0ba8cfea389d73 530 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 424 517 1.8E-9 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Trad_0271 f0d6c08e25c7d0f5cd0ba8cfea389d73 530 SMART SM00387 421 522 8.0E-14 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Trad_0271 f0d6c08e25c7d0f5cd0ba8cfea389d73 530 SUPERFAMILY SSF55874 405 518 6.16E-18 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Trad_0271 f0d6c08e25c7d0f5cd0ba8cfea389d73 530 SMART SM00091 60 129 3.2E-5 T 15-10-2018 IPR000014 PAS domain Trad_0271 f0d6c08e25c7d0f5cd0ba8cfea389d73 530 SMART SM00091 184 255 0.0054 T 15-10-2018 IPR000014 PAS domain Trad_0271 f0d6c08e25c7d0f5cd0ba8cfea389d73 530 Pfam PF13426 PAS domain 76 174 6.2E-19 T 15-10-2018 IPR000014 PAS domain Trad_0271 f0d6c08e25c7d0f5cd0ba8cfea389d73 530 Pfam PF13426 PAS domain 208 302 4.4E-18 T 15-10-2018 IPR000014 PAS domain Trad_0271 f0d6c08e25c7d0f5cd0ba8cfea389d73 530 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 181 308 3.4E-22 T 15-10-2018 IPR000014 PAS domain Trad_0271 f0d6c08e25c7d0f5cd0ba8cfea389d73 530 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 69 183 4.9E-18 T 15-10-2018 IPR000014 PAS domain Trad_0271 f0d6c08e25c7d0f5cd0ba8cfea389d73 530 SUPERFAMILY SSF55785 196 303 3.49E-28 T 15-10-2018 IPR035965 PAS domain superfamily Trad_0271 f0d6c08e25c7d0f5cd0ba8cfea389d73 530 SMART SM00086 261 303 5.2E-9 T 15-10-2018 IPR001610 PAC motif Trad_0271 f0d6c08e25c7d0f5cd0ba8cfea389d73 530 SMART SM00086 135 176 2.8E-6 T 15-10-2018 IPR001610 PAC motif Trad_0271 f0d6c08e25c7d0f5cd0ba8cfea389d73 530 SUPERFAMILY SSF55785 67 174 6.28E-28 T 15-10-2018 IPR035965 PAS domain superfamily Trad_0271 f0d6c08e25c7d0f5cd0ba8cfea389d73 530 Gene3D G3DSA:3.30.565.10 394 518 4.4E-25 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Trad_0271 f0d6c08e25c7d0f5cd0ba8cfea389d73 530 Pfam PF07730 Histidine kinase 317 383 2.5E-11 T 15-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 Trad_0271 f0d6c08e25c7d0f5cd0ba8cfea389d73 530 Gene3D G3DSA:3.30.450.20 184 337 1.7E-47 T 15-10-2018 Trad_0271 f0d6c08e25c7d0f5cd0ba8cfea389d73 530 Gene3D G3DSA:3.30.450.20 61 183 7.4E-48 T 15-10-2018 Trad_1256 c4f5f08eaa20a931193eeb93547c86e4 1025 Gene3D G3DSA:1.25.40.10 871 1021 5.2E-13 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Trad_1256 c4f5f08eaa20a931193eeb93547c86e4 1025 SUPERFAMILY SSF52540 32 185 4.43E-5 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_1256 c4f5f08eaa20a931193eeb93547c86e4 1025 SMART SM00028 559 592 11.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Trad_1256 c4f5f08eaa20a931193eeb93547c86e4 1025 SMART SM00028 479 512 21.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Trad_1256 c4f5f08eaa20a931193eeb93547c86e4 1025 SMART SM00028 599 632 2.9 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Trad_1256 c4f5f08eaa20a931193eeb93547c86e4 1025 SMART SM00028 637 670 81.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Trad_1256 c4f5f08eaa20a931193eeb93547c86e4 1025 SMART SM01043 879 1011 2.6E-5 T 15-10-2018 IPR005158 Bacterial transcriptional activator domain Trad_1256 c4f5f08eaa20a931193eeb93547c86e4 1025 Gene3D G3DSA:1.25.40.10 592 741 1.7E-8 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Trad_1256 c4f5f08eaa20a931193eeb93547c86e4 1025 Gene3D G3DSA:1.10.10.10 774 870 2.0E-8 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Trad_1256 c4f5f08eaa20a931193eeb93547c86e4 1025 Gene3D G3DSA:1.25.40.10 368 591 4.4E-16 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Trad_1256 c4f5f08eaa20a931193eeb93547c86e4 1025 SUPERFAMILY SSF48452 888 1009 6.32E-7 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Trad_1256 c4f5f08eaa20a931193eeb93547c86e4 1025 SUPERFAMILY SSF48452 455 633 8.43E-16 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Trad_2186 a2f328c51b984bf83bb66901238254e8 338 SMART SM00829 19 319 4.7E-5 T 15-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Trad_2186 a2f328c51b984bf83bb66901238254e8 338 Gene3D G3DSA:3.40.50.720 147 281 8.0E-86 T 15-10-2018 Trad_2186 a2f328c51b984bf83bb66901238254e8 338 Pfam PF00107 Zinc-binding dehydrogenase 169 297 3.3E-27 T 15-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Trad_2186 a2f328c51b984bf83bb66901238254e8 338 SUPERFAMILY SSF51735 133 301 1.6E-38 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_2186 a2f328c51b984bf83bb66901238254e8 338 SUPERFAMILY SSF50129 8 168 3.2E-44 T 15-10-2018 IPR011032 GroES-like superfamily Trad_2186 a2f328c51b984bf83bb66901238254e8 338 Gene3D G3DSA:3.90.180.10 28 317 8.0E-86 T 15-10-2018 Trad_2186 a2f328c51b984bf83bb66901238254e8 338 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 36 129 1.1E-16 T 15-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Trad_1047 17197e779f8627d5bdf3a51e834eff47 81 Gene3D G3DSA:2.40.50.140 1 81 6.1E-34 T 15-10-2018 Trad_1047 17197e779f8627d5bdf3a51e834eff47 81 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 2 72 1.0E-21 T 15-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Trad_1047 17197e779f8627d5bdf3a51e834eff47 81 SUPERFAMILY SSF50249 2 79 6.0E-30 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold Trad_1047 17197e779f8627d5bdf3a51e834eff47 81 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 2 77 23.254 T 15-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Trad_1047 17197e779f8627d5bdf3a51e834eff47 81 Pfam PF00366 Ribosomal protein S17 7 73 7.2E-30 T 15-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Trad_1047 17197e779f8627d5bdf3a51e834eff47 81 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 2 72 5.4E-34 T 15-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Trad_1047 17197e779f8627d5bdf3a51e834eff47 81 PRINTS PR00973 Ribosomal protein S17 family signature 53 63 1.2E-9 T 15-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Trad_1047 17197e779f8627d5bdf3a51e834eff47 81 PRINTS PR00973 Ribosomal protein S17 family signature 21 44 1.2E-9 T 15-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Trad_1047 17197e779f8627d5bdf3a51e834eff47 81 PRINTS PR00973 Ribosomal protein S17 family signature 63 70 1.2E-9 T 15-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Trad_0367 60892f1998c17d486b92b177491fb76d 47 Pfam PF00468 Ribosomal protein L34 1 44 1.2E-23 T 15-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_0367 60892f1998c17d486b92b177491fb76d 47 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 39 6.0E-12 T 15-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_0367 60892f1998c17d486b92b177491fb76d 47 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 15-10-2018 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Trad_0367 60892f1998c17d486b92b177491fb76d 47 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 44 3.4E-24 T 15-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_0367 60892f1998c17d486b92b177491fb76d 47 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 16.483 T 15-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_0343 09baef5f100bd7653741856c3321e3da 225 Pfam PF01694 Rhomboid family 59 206 2.3E-36 T 15-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 Trad_0343 09baef5f100bd7653741856c3321e3da 225 Gene3D G3DSA:1.20.1540.10 8 209 4.4E-31 T 15-10-2018 IPR035952 Rhomboid-like superfamily Trad_0343 09baef5f100bd7653741856c3321e3da 225 SUPERFAMILY SSF144091 12 212 6.93E-41 T 15-10-2018 Trad_2639 b4997ea466df08aa4e5f1bbb54559377 218 Gene3D G3DSA:3.40.109.10 15 214 1.3E-56 T 15-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Trad_2639 b4997ea466df08aa4e5f1bbb54559377 218 Pfam PF00881 Nitroreductase family 86 176 8.5E-10 T 15-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 Trad_2639 b4997ea466df08aa4e5f1bbb54559377 218 Pfam PF00881 Nitroreductase family 30 76 4.4E-15 T 15-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 Trad_2639 b4997ea466df08aa4e5f1bbb54559377 218 SUPERFAMILY SSF55469 22 210 1.2E-49 T 15-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Trad_0589 242faefda60dea727290ad8f6098f62b 617 Pfam PF13360 PQQ-like domain 531 616 7.9E-12 T 15-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat Trad_0589 242faefda60dea727290ad8f6098f62b 617 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 20 43 - T 15-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 Trad_0589 242faefda60dea727290ad8f6098f62b 617 Gene3D G3DSA:2.130.10.10 472 617 1.0E-30 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Trad_0589 242faefda60dea727290ad8f6098f62b 617 Gene3D G3DSA:2.130.10.10 304 416 7.3E-7 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Trad_0589 242faefda60dea727290ad8f6098f62b 617 Pfam PF00069 Protein kinase domain 15 261 2.2E-44 T 15-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Trad_0589 242faefda60dea727290ad8f6098f62b 617 Pfam PF13570 PQQ-like domain 422 460 1.9E-5 T 15-10-2018 IPR025666 Pyrrolo-quinoline quinone-like domain Trad_0589 242faefda60dea727290ad8f6098f62b 617 SMART SM00564 437 468 110.0 T 15-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Trad_0589 242faefda60dea727290ad8f6098f62b 617 SMART SM00564 475 507 210.0 T 15-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Trad_0589 242faefda60dea727290ad8f6098f62b 617 SMART SM00564 515 547 47.0 T 15-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Trad_0589 242faefda60dea727290ad8f6098f62b 617 SMART SM00564 321 353 370.0 T 15-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Trad_0589 242faefda60dea727290ad8f6098f62b 617 SMART SM00564 556 587 1.7 T 15-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Trad_0589 242faefda60dea727290ad8f6098f62b 617 ProSitePatterns PS00109 Tyrosine protein kinases specific active-site signature. 131 143 - T 15-10-2018 IPR008266 Tyrosine-protein kinase, active site GO:0004672|GO:0006468 Trad_0589 242faefda60dea727290ad8f6098f62b 617 Gene3D G3DSA:1.10.510.10 108 279 4.1E-45 T 15-10-2018 Trad_0589 242faefda60dea727290ad8f6098f62b 617 SUPERFAMILY SSF50998 302 616 2.58E-33 T 15-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily Trad_0589 242faefda60dea727290ad8f6098f62b 617 Gene3D G3DSA:3.30.200.20 1 93 3.5E-26 T 15-10-2018 Trad_0589 242faefda60dea727290ad8f6098f62b 617 Gene3D G3DSA:2.40.128.630 417 471 2.7E-5 T 15-10-2018 Trad_0589 242faefda60dea727290ad8f6098f62b 617 SUPERFAMILY SSF56112 4 266 1.35E-67 T 15-10-2018 IPR011009 Protein kinase-like domain superfamily Trad_2008 1042de9a07f78e095c3c302d402a056f 412 Pfam PF08245 Mur ligase middle domain 51 191 1.5E-9 T 15-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Trad_2008 1042de9a07f78e095c3c302d402a056f 412 SUPERFAMILY SSF53244 275 393 3.3E-20 T 15-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Trad_2008 1042de9a07f78e095c3c302d402a056f 412 Gene3D G3DSA:3.40.1190.10 3 276 7.1E-65 T 15-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Trad_2008 1042de9a07f78e095c3c302d402a056f 412 Pfam PF02875 Mur ligase family, glutamate ligase domain 276 343 7.5E-7 T 15-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Trad_2008 1042de9a07f78e095c3c302d402a056f 412 SUPERFAMILY SSF53623 10 274 2.01E-54 T 15-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Trad_2008 1042de9a07f78e095c3c302d402a056f 412 Gene3D G3DSA:3.90.190.20 277 397 1.0E-20 T 15-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Trad_2008 1042de9a07f78e095c3c302d402a056f 412 TIGRFAM TIGR01499 folC: bifunctional protein FolC 31 392 4.9E-76 T 15-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 Trad_1043 1f3575791fc82b80526c15adc94d39fd 112 SUPERFAMILY SSF54843 1 111 3.79E-42 T 15-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 Trad_1043 1f3575791fc82b80526c15adc94d39fd 112 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 15-10-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Trad_1043 1f3575791fc82b80526c15adc94d39fd 112 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 6 106 4.3E-37 T 15-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_1043 1f3575791fc82b80526c15adc94d39fd 112 Pfam PF00237 Ribosomal protein L22p/L17e 6 108 2.9E-36 T 15-10-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 Trad_1043 1f3575791fc82b80526c15adc94d39fd 112 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 110 27.925 T 15-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_1043 1f3575791fc82b80526c15adc94d39fd 112 Gene3D G3DSA:3.90.470.10 1 112 2.5E-45 T 15-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 Trad_2831 20925dcb2eb625805c8d06babcf9385a 219 Pfam PF14344 Domain of unknown function (DUF4397) 43 142 4.0E-8 T 15-10-2018 IPR025510 Domain of unknown function DUF4397 Trad_2831 20925dcb2eb625805c8d06babcf9385a 219 ProDom PD022759 ALGINATE BIOSYNTHESIS ALGF PRECURSOR SIGNAL PERIPLASMIC TRANSFERASE O-ACETYLTRANSFERASE 33 201 5.0E-15 T 15-10-2018 IPR035422 Alginate O-acetyl transferase AlgF GO:0042121 Trad_2831 20925dcb2eb625805c8d06babcf9385a 219 Pfam PF11182 Alginate O-acetyl transferase AlgF 27 196 6.1E-29 T 15-10-2018 IPR035422 Alginate O-acetyl transferase AlgF GO:0042121 Trad_2929 b2a19fc810c053906fca36b11ca8f9ff 95 Gene3D G3DSA:2.30.33.40 2 95 7.2E-35 T 15-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 Trad_2929 b2a19fc810c053906fca36b11ca8f9ff 95 SMART SM00883 2 94 2.4E-51 T 15-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Trad_2929 b2a19fc810c053906fca36b11ca8f9ff 95 Pfam PF00166 Chaperonin 10 Kd subunit 3 94 1.2E-32 T 15-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Trad_2929 b2a19fc810c053906fca36b11ca8f9ff 95 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 15-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 Trad_2929 b2a19fc810c053906fca36b11ca8f9ff 95 Hamap MF_00580 10 kDa chaperonin [groS]. 2 95 24.476 T 15-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Trad_2929 b2a19fc810c053906fca36b11ca8f9ff 95 SUPERFAMILY SSF50129 1 94 3.65E-32 T 15-10-2018 IPR011032 GroES-like superfamily Trad_2929 b2a19fc810c053906fca36b11ca8f9ff 95 PRINTS PR00297 10kDa chaperonin signature 3 18 2.8E-27 T 15-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Trad_2929 b2a19fc810c053906fca36b11ca8f9ff 95 PRINTS PR00297 10kDa chaperonin signature 25 46 2.8E-27 T 15-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Trad_2929 b2a19fc810c053906fca36b11ca8f9ff 95 PRINTS PR00297 10kDa chaperonin signature 81 94 2.8E-27 T 15-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Trad_2929 b2a19fc810c053906fca36b11ca8f9ff 95 PRINTS PR00297 10kDa chaperonin signature 60 72 2.8E-27 T 15-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Trad_1794 d56ef08421759d8d55836c0679a79ad2 329 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 133 8.8E-35 T 15-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Trad_1794 d56ef08421759d8d55836c0679a79ad2 329 Gene3D G3DSA:3.90.180.10 12 321 7.5E-88 T 15-10-2018 Trad_1794 d56ef08421759d8d55836c0679a79ad2 329 Gene3D G3DSA:3.40.50.720 147 276 7.5E-88 T 15-10-2018 Trad_1794 d56ef08421759d8d55836c0679a79ad2 329 SUPERFAMILY SSF51735 138 290 9.68E-23 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_1794 d56ef08421759d8d55836c0679a79ad2 329 TIGRFAM TIGR02822 adh_fam_2: zinc-binding alcohol dehydrogenase family protein 11 326 2.1E-104 T 15-10-2018 IPR014187 Alcohol dehydrogenase, zinc-binding type 2 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396 Trad_1794 d56ef08421759d8d55836c0679a79ad2 329 SUPERFAMILY SSF50129 1 159 1.4E-54 T 15-10-2018 IPR011032 GroES-like superfamily Trad_1606 c22972231597564ab4cfcb796d534c74 380 Gene3D G3DSA:3.40.50.2000 5 351 5.2E-88 T 15-10-2018 Trad_1606 c22972231597564ab4cfcb796d534c74 380 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 1 356 2.3E-78 T 15-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Trad_1606 c22972231597564ab4cfcb796d534c74 380 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 188 343 3.4E-35 T 15-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 Trad_1606 c22972231597564ab4cfcb796d534c74 380 Gene3D G3DSA:3.40.50.2000 164 346 5.2E-88 T 15-10-2018 Trad_1606 c22972231597564ab4cfcb796d534c74 380 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 4 135 1.2E-31 T 15-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Trad_1606 c22972231597564ab4cfcb796d534c74 380 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 4 362 28.666 T 15-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Trad_1606 c22972231597564ab4cfcb796d534c74 380 SUPERFAMILY SSF53756 3 361 8.75E-84 T 15-10-2018 Trad_2014 0e5cadf9357fae0168274a8263b7f3df 613 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 481 608 1.1E-13 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Trad_2014 0e5cadf9357fae0168274a8263b7f3df 613 SUPERFAMILY SSF161098 479 594 4.19E-24 T 15-10-2018 IPR035906 MetI-like superfamily Trad_2014 0e5cadf9357fae0168274a8263b7f3df 613 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 86 151 2.8E-17 T 15-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 Trad_2014 0e5cadf9357fae0168274a8263b7f3df 613 Gene3D G3DSA:1.10.3720.10 75 183 8.7E-15 T 15-10-2018 IPR035906 MetI-like superfamily Trad_2014 0e5cadf9357fae0168274a8263b7f3df 613 Gene3D G3DSA:1.10.3720.10 446 609 5.2E-30 T 15-10-2018 IPR035906 MetI-like superfamily Trad_2014 0e5cadf9357fae0168274a8263b7f3df 613 SUPERFAMILY SSF161098 87 208 6.41E-9 T 15-10-2018 IPR035906 MetI-like superfamily Trad_1087 ce5e9060e720b198128b1f8e33f1c245 316 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 3 313 3.5E-133 T 15-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Trad_1087 ce5e9060e720b198128b1f8e33f1c245 316 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 3 145 2.0E-57 T 15-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Trad_1087 ce5e9060e720b198128b1f8e33f1c245 316 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 2 313 47.783 T 15-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Trad_1087 ce5e9060e720b198128b1f8e33f1c245 316 SUPERFAMILY SSF52096 4 312 7.08E-99 T 15-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Trad_1087 ce5e9060e720b198128b1f8e33f1c245 316 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 194 203 2.4E-40 T 15-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Trad_1087 ce5e9060e720b198128b1f8e33f1c245 316 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 150 163 2.4E-40 T 15-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Trad_1087 ce5e9060e720b198128b1f8e33f1c245 316 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 110 128 2.4E-40 T 15-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Trad_1087 ce5e9060e720b198128b1f8e33f1c245 316 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 85 96 2.4E-40 T 15-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Trad_1087 ce5e9060e720b198128b1f8e33f1c245 316 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 166 179 2.4E-40 T 15-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Trad_1087 ce5e9060e720b198128b1f8e33f1c245 316 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 131 147 2.4E-40 T 15-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Trad_1087 ce5e9060e720b198128b1f8e33f1c245 316 Gene3D G3DSA:3.90.226.10 1 314 7.3E-118 T 15-10-2018 Trad_1259 038cbd329008d80ff7fa5c6bd0be9b55 407 SUPERFAMILY SSF52210 260 406 5.49E-52 T 15-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Trad_1259 038cbd329008d80ff7fa5c6bd0be9b55 407 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 1 407 42.099 T 15-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Trad_1259 038cbd329008d80ff7fa5c6bd0be9b55 407 PIRSF PIRSF001554 1 407 4.0E-142 T 15-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Trad_1259 038cbd329008d80ff7fa5c6bd0be9b55 407 Pfam PF08442 ATP-grasp domain 2 224 4.0E-65 T 15-10-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Trad_1259 038cbd329008d80ff7fa5c6bd0be9b55 407 Gene3D G3DSA:3.30.470.20 1 255 6.8E-83 T 15-10-2018 Trad_1259 038cbd329008d80ff7fa5c6bd0be9b55 407 Pfam PF00549 CoA-ligase 283 401 2.2E-27 T 15-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Trad_1259 038cbd329008d80ff7fa5c6bd0be9b55 407 Gene3D G3DSA:3.30.1490.20 21 125 6.8E-83 T 15-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Trad_1259 038cbd329008d80ff7fa5c6bd0be9b55 407 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 2 407 3.4E-143 T 15-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Trad_1259 038cbd329008d80ff7fa5c6bd0be9b55 407 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 278 303 - T 15-10-2018 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Trad_1259 038cbd329008d80ff7fa5c6bd0be9b55 407 Gene3D G3DSA:3.40.50.261 261 407 5.5E-55 T 15-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Trad_1259 038cbd329008d80ff7fa5c6bd0be9b55 407 SUPERFAMILY SSF56059 1 259 8.94E-69 T 15-10-2018 Trad_0253 7feea45b2d0d6047ad2762110f17fd53 629 SUPERFAMILY SSF56801 28 618 2.49E-160 T 15-10-2018 Trad_0253 7feea45b2d0d6047ad2762110f17fd53 629 Pfam PF00501 AMP-binding enzyme 86 522 4.3E-86 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Trad_0253 7feea45b2d0d6047ad2762110f17fd53 629 Pfam PF13193 AMP-binding enzyme C-terminal domain 532 606 1.4E-29 T 15-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Trad_0253 7feea45b2d0d6047ad2762110f17fd53 629 Gene3D G3DSA:3.30.300.30 518 629 1.2E-29 T 15-10-2018 Trad_0253 7feea45b2d0d6047ad2762110f17fd53 629 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 29 82 8.8E-18 T 15-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 Trad_0253 7feea45b2d0d6047ad2762110f17fd53 629 Gene3D G3DSA:3.40.50.12780 60 516 4.1E-100 T 15-10-2018 Trad_0253 7feea45b2d0d6047ad2762110f17fd53 629 ProSitePatterns PS00455 Putative AMP-binding domain signature. 263 274 - T 15-10-2018 IPR020845 AMP-binding, conserved site Trad_1048 19785dc84f1b78074a54dd8558e57453 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 2.9E-53 T 15-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 Trad_1048 19785dc84f1b78074a54dd8558e57453 122 SUPERFAMILY SSF50193 1 122 5.23E-49 T 15-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 Trad_1048 19785dc84f1b78074a54dd8558e57453 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 26.459 T 15-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 Trad_1048 19785dc84f1b78074a54dd8558e57453 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 15-10-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Trad_1048 19785dc84f1b78074a54dd8558e57453 122 SMART SM01374 1 122 4.2E-81 T 15-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 Trad_1048 19785dc84f1b78074a54dd8558e57453 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 8.0E-56 T 15-10-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 Trad_1048 19785dc84f1b78074a54dd8558e57453 122 Gene3D G3DSA:2.40.150.20 1 122 1.1E-51 T 15-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 Trad_2818 bea39711555c6572f142d5a2a4feabf2 484 Gene3D G3DSA:3.60.120.10 4 483 1.1E-181 T 15-10-2018 IPR005801 ADC synthase GO:0009058 Trad_2818 bea39711555c6572f142d5a2a4feabf2 484 SUPERFAMILY SSF56322 17 479 2.88E-154 T 15-10-2018 IPR005801 ADC synthase GO:0009058 Trad_2818 bea39711555c6572f142d5a2a4feabf2 484 TIGRFAM TIGR00564 trpE_most: anthranilate synthase component I 26 476 2.6E-168 T 15-10-2018 IPR005256 Anthranilate synthase component I, PabB-like GO:0000162|GO:0004049 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Trad_2818 bea39711555c6572f142d5a2a4feabf2 484 Pfam PF04715 Anthranilate synthase component I, N terminal region 27 165 6.6E-33 T 15-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Trad_2818 bea39711555c6572f142d5a2a4feabf2 484 PRINTS PR00095 Anthranilate synthase component I signature 316 329 3.9E-23 T 15-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Trad_2818 bea39711555c6572f142d5a2a4feabf2 484 PRINTS PR00095 Anthranilate synthase component I signature 425 439 3.9E-23 T 15-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Trad_2818 bea39711555c6572f142d5a2a4feabf2 484 PRINTS PR00095 Anthranilate synthase component I signature 330 343 3.9E-23 T 15-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Trad_2818 bea39711555c6572f142d5a2a4feabf2 484 PRINTS PR00095 Anthranilate synthase component I signature 410 424 3.9E-23 T 15-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Trad_2818 bea39711555c6572f142d5a2a4feabf2 484 Pfam PF00425 chorismate binding enzyme 214 468 9.6E-97 T 15-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal Trad_2271 c299e4241ae4fd639218ddc071699cb4 185 Gene3D G3DSA:3.40.630.30 5 184 1.2E-30 T 15-10-2018 Trad_2271 c299e4241ae4fd639218ddc071699cb4 185 SUPERFAMILY SSF55729 2 149 1.12E-24 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase Trad_2271 c299e4241ae4fd639218ddc071699cb4 185 Pfam PF13302 Acetyltransferase (GNAT) domain 7 148 5.4E-20 T 15-10-2018 IPR000182 GNAT domain Trad_0920 09867c87a4e157c5983f9db6a55b2bc4 451 SUPERFAMILY SSF54862 326 410 1.78E-13 T 15-10-2018 Trad_0920 09867c87a4e157c5983f9db6a55b2bc4 451 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 392 403 - T 15-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Trad_0920 09867c87a4e157c5983f9db6a55b2bc4 451 Gene3D G3DSA:3.30.70.20 310 425 8.4E-18 T 15-10-2018 Trad_0920 09867c87a4e157c5983f9db6a55b2bc4 451 TIGRFAM TIGR01037 pyrD_sub1_fam: dihydroorotate dehydrogenase family protein 4 320 4.1E-51 T 15-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 Trad_0920 09867c87a4e157c5983f9db6a55b2bc4 451 Pfam PF01180 Dihydroorotate dehydrogenase 5 304 1.9E-29 T 15-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 Trad_0920 09867c87a4e157c5983f9db6a55b2bc4 451 Pfam PF14697 4Fe-4S dicluster domain 338 410 4.2E-21 T 15-10-2018 Trad_0920 09867c87a4e157c5983f9db6a55b2bc4 451 SUPERFAMILY SSF51395 1 320 1.53E-67 T 15-10-2018 Trad_0920 09867c87a4e157c5983f9db6a55b2bc4 451 Gene3D G3DSA:3.20.20.70 4 309 3.1E-98 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Trad_2108 a6fd560e895423e374bcb05b5d341d00 829 Gene3D G3DSA:1.10.3810.10 71 261 1.1E-57 T 15-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Trad_2108 a6fd560e895423e374bcb05b5d341d00 829 SUPERFAMILY SSF56601 230 691 5.82E-108 T 15-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Trad_2108 a6fd560e895423e374bcb05b5d341d00 829 SUPERFAMILY SSF53955 52 267 1.88E-56 T 15-10-2018 IPR023346 Lysozyme-like domain superfamily Trad_2108 a6fd560e895423e374bcb05b5d341d00 829 Pfam PF00912 Transglycosylase 78 245 2.9E-53 T 15-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Trad_2108 a6fd560e895423e374bcb05b5d341d00 829 Pfam PF00905 Penicillin binding protein transpeptidase domain 359 603 3.3E-31 T 15-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 Trad_2108 a6fd560e895423e374bcb05b5d341d00 829 Gene3D G3DSA:3.40.710.10 292 695 5.2E-114 T 15-10-2018 Trad_0369 b2280dd64e9aebb96e55eeefb8559bfb 87 SMART SM01234 10 78 2.2E-39 T 15-10-2018 IPR002696 Putative membrane protein insertion efficiency factor Trad_0369 b2280dd64e9aebb96e55eeefb8559bfb 87 Pfam PF01809 Haemolytic domain 12 78 1.2E-28 T 15-10-2018 IPR002696 Putative membrane protein insertion efficiency factor Trad_0369 b2280dd64e9aebb96e55eeefb8559bfb 87 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 10 79 23.755 T 15-10-2018 IPR002696 Putative membrane protein insertion efficiency factor Trad_0369 b2280dd64e9aebb96e55eeefb8559bfb 87 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 25 78 1.0E-8 T 15-10-2018 IPR002696 Putative membrane protein insertion efficiency factor Trad_0369 b2280dd64e9aebb96e55eeefb8559bfb 87 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 16 85 1.8E-26 T 15-10-2018 IPR002696 Putative membrane protein insertion efficiency factor Trad_1145 f762d576417c4427619d395aaccc56dc 319 Pfam PF05138 Phenylacetic acid catabolic protein 29 302 2.2E-94 T 15-10-2018 IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C GO:0010124 Trad_1145 f762d576417c4427619d395aaccc56dc 319 SUPERFAMILY SSF47240 39 281 1.95E-80 T 15-10-2018 IPR009078 Ferritin-like superfamily Trad_1145 f762d576417c4427619d395aaccc56dc 319 TIGRFAM TIGR02156 PA_CoA_Oxy1: phenylacetate-CoA oxygenase, PaaG subunit 19 306 3.1E-154 T 15-10-2018 IPR011881 1,2-phenylacetyl-CoA epoxidase, subunit A GO:0010124|GO:0097266 KEGG: 00360+1.14.13.149 Trad_1145 f762d576417c4427619d395aaccc56dc 319 Gene3D G3DSA:1.20.1260.10 12 319 6.2E-123 T 15-10-2018 IPR012347 Ferritin-like Trad_1733 58f5c181756c7c3fa4f47cb01fb48872 326 Gene3D G3DSA:3.60.15.10 22 283 1.6E-56 T 15-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Trad_1733 58f5c181756c7c3fa4f47cb01fb48872 326 SUPERFAMILY SSF56281 24 278 4.72E-48 T 15-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Trad_1733 58f5c181756c7c3fa4f47cb01fb48872 326 Pfam PF00753 Metallo-beta-lactamase superfamily 47 237 3.0E-19 T 15-10-2018 IPR001279 Metallo-beta-lactamase Trad_1733 58f5c181756c7c3fa4f47cb01fb48872 326 SMART SM00849 14 237 3.6E-30 T 15-10-2018 IPR001279 Metallo-beta-lactamase Trad_0563 f4cea661d684795ff5afd0755ece0fa7 239 Pfam PF09844 Uncharacterized conserved protein (COG2071) 15 226 8.4E-70 T 15-10-2018 IPR018644 Protein of unknown function DUF2071 Trad_0563 f4cea661d684795ff5afd0755ece0fa7 239 Gene3D G3DSA:2.40.400.10 3 149 1.1E-5 T 15-10-2018 IPR023375 Acetoacetate decarboxylase domain superfamily KEGG: 00072+4.1.1.4|KEGG: 00640+4.1.1.4|MetaCyc: PWY-5451|MetaCyc: PWY-6588|MetaCyc: PWY-6876|MetaCyc: PWY-7466 Trad_0563 f4cea661d684795ff5afd0755ece0fa7 239 SUPERFAMILY SSF160104 6 191 8.24E-16 T 15-10-2018 IPR023375 Acetoacetate decarboxylase domain superfamily KEGG: 00072+4.1.1.4|KEGG: 00640+4.1.1.4|MetaCyc: PWY-5451|MetaCyc: PWY-6588|MetaCyc: PWY-6876|MetaCyc: PWY-7466 Trad_0274 34a4163772c125251020bc0e2c4a81ab 655 Gene3D G3DSA:3.40.50.620 30 352 1.7E-138 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Trad_0274 34a4163772c125251020bc0e2c4a81ab 655 SUPERFAMILY SSF47323 371 528 3.18E-43 T 15-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Trad_0274 34a4163772c125251020bc0e2c4a81ab 655 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 540 654 4.1E-40 T 15-10-2018 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Trad_0274 34a4163772c125251020bc0e2c4a81ab 655 SUPERFAMILY SSF52374 28 369 2.2E-103 T 15-10-2018 Trad_0274 34a4163772c125251020bc0e2c4a81ab 655 Pfam PF01588 Putative tRNA binding domain 560 651 2.0E-29 T 15-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 Trad_0274 34a4163772c125251020bc0e2c4a81ab 655 SUPERFAMILY SSF50249 553 652 2.3E-33 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold Trad_0274 34a4163772c125251020bc0e2c4a81ab 655 Gene3D G3DSA:2.40.50.140 545 654 5.2E-38 T 15-10-2018 Trad_0274 34a4163772c125251020bc0e2c4a81ab 655 Gene3D G3DSA:1.10.730.10 360 531 6.3E-51 T 15-10-2018 Trad_0274 34a4163772c125251020bc0e2c4a81ab 655 Gene3D G3DSA:2.170.220.10 141 251 1.7E-138 T 15-10-2018 Trad_0274 34a4163772c125251020bc0e2c4a81ab 655 Hamap MF_01228 Methionine--tRNA ligase [metG]. 25 528 44.823 T 15-10-2018 IPR023457 Methionine-tRNA synthetase, type 2 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Trad_0274 34a4163772c125251020bc0e2c4a81ab 655 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 31 500 2.5E-140 T 15-10-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Trad_0274 34a4163772c125251020bc0e2c4a81ab 655 Pfam PF09334 tRNA synthetases class I (M) 177 383 4.4E-55 T 15-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Trad_0274 34a4163772c125251020bc0e2c4a81ab 655 Pfam PF09334 tRNA synthetases class I (M) 31 171 1.2E-42 T 15-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Trad_0274 34a4163772c125251020bc0e2c4a81ab 655 PRINTS PR01041 Methionyl-tRNA synthetase signature 112 123 2.0E-31 T 15-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Trad_0274 34a4163772c125251020bc0e2c4a81ab 655 PRINTS PR01041 Methionyl-tRNA synthetase signature 64 78 2.0E-31 T 15-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Trad_0274 34a4163772c125251020bc0e2c4a81ab 655 PRINTS PR01041 Methionyl-tRNA synthetase signature 278 293 2.0E-31 T 15-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Trad_0274 34a4163772c125251020bc0e2c4a81ab 655 PRINTS PR01041 Methionyl-tRNA synthetase signature 370 381 2.0E-31 T 15-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Trad_0274 34a4163772c125251020bc0e2c4a81ab 655 PRINTS PR01041 Methionyl-tRNA synthetase signature 32 45 2.0E-31 T 15-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Trad_0274 34a4163772c125251020bc0e2c4a81ab 655 PRINTS PR01041 Methionyl-tRNA synthetase signature 249 260 2.0E-31 T 15-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Trad_2682 0ee6dcae3d0ed7df23ab85e7dbf01ea1 621 Pfam PF01926 50S ribosome-binding GTPase 54 181 5.9E-13 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 Trad_2682 0ee6dcae3d0ed7df23ab85e7dbf01ea1 621 Gene3D G3DSA:3.40.50.300 23 263 9.1E-44 T 15-10-2018 Trad_2682 0ee6dcae3d0ed7df23ab85e7dbf01ea1 621 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 52 195 6.1E-13 T 15-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Trad_2682 0ee6dcae3d0ed7df23ab85e7dbf01ea1 621 SUPERFAMILY SSF52540 35 211 1.3E-39 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_2969 2103f54c760b8a114c927f1e458918f2 139 PRINTS PR00421 Thioredoxin family signature 102 113 2.0E-7 T 15-10-2018 Trad_2969 2103f54c760b8a114c927f1e458918f2 139 PRINTS PR00421 Thioredoxin family signature 54 62 2.0E-7 T 15-10-2018 Trad_2969 2103f54c760b8a114c927f1e458918f2 139 PRINTS PR00421 Thioredoxin family signature 62 71 2.0E-7 T 15-10-2018 Trad_2969 2103f54c760b8a114c927f1e458918f2 139 PIRSF PIRSF000077 26 138 3.0E-38 T 15-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 Trad_2969 2103f54c760b8a114c927f1e458918f2 139 ProSitePatterns PS00194 Thioredoxin family active site. 55 73 - T 15-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 Trad_2969 2103f54c760b8a114c927f1e458918f2 139 TIGRFAM TIGR01068 thioredoxin: thioredoxin 41 134 3.5E-34 T 15-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 Trad_2969 2103f54c760b8a114c927f1e458918f2 139 Pfam PF00085 Thioredoxin 38 134 7.2E-29 T 15-10-2018 IPR013766 Thioredoxin domain GO:0045454 Trad_2969 2103f54c760b8a114c927f1e458918f2 139 Gene3D G3DSA:3.40.30.10 31 138 2.8E-29 T 15-10-2018 Trad_2969 2103f54c760b8a114c927f1e458918f2 139 SUPERFAMILY SSF52833 38 138 4.37E-36 T 15-10-2018 IPR036249 Thioredoxin-like superfamily Trad_2969 2103f54c760b8a114c927f1e458918f2 139 Gene3D G3DSA:2.20.28.140 3 30 3.8E-5 T 15-10-2018 Trad_2528 d6643586581d17191accea6efeeef99e 364 Pfam PF02547 Queuosine biosynthesis protein 6 346 6.8E-79 T 15-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 Trad_2528 d6643586581d17191accea6efeeef99e 364 Gene3D G3DSA:3.40.1780.10 27 346 1.3E-65 T 15-10-2018 Trad_2528 d6643586581d17191accea6efeeef99e 364 Gene3D G3DSA:2.40.10.240 68 172 1.3E-65 T 15-10-2018 Trad_2528 d6643586581d17191accea6efeeef99e 364 SUPERFAMILY SSF111337 4 347 6.02E-78 T 15-10-2018 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 Trad_1079 57afaf666f84229847541e1e1aa3d54f 452 Hamap MF_00712 Probable glycine dehydrogenase (decarboxylating) subunit 1 [gcvPA]. 1 436 43.461 T 15-10-2018 IPR023010 Probable glycine dehydrogenase (decarboxylating) subunit 1 GO:0004375|GO:0009116 KEGG: 00260+1.4.4.2 Trad_1079 57afaf666f84229847541e1e1aa3d54f 452 SUPERFAMILY SSF53383 2 437 1.01E-114 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Trad_1079 57afaf666f84229847541e1e1aa3d54f 452 PIRSF PIRSF006815 1 437 5.7E-156 T 15-10-2018 IPR023010 Probable glycine dehydrogenase (decarboxylating) subunit 1 GO:0004375|GO:0009116 KEGG: 00260+1.4.4.2 Trad_1079 57afaf666f84229847541e1e1aa3d54f 452 Gene3D G3DSA:3.90.1150.10 68 433 1.2E-149 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Trad_1079 57afaf666f84229847541e1e1aa3d54f 452 Gene3D G3DSA:3.40.640.10 79 340 1.2E-149 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Trad_1079 57afaf666f84229847541e1e1aa3d54f 452 Pfam PF02347 Glycine cleavage system P-protein 2 432 3.1E-123 T 15-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 Trad_1239 8ee6460395d31591ac28e5307065a5f6 127 Gene3D G3DSA:3.40.250.10 17 126 2.4E-26 T 15-10-2018 IPR036873 Rhodanese-like domain superfamily Trad_1239 8ee6460395d31591ac28e5307065a5f6 127 Pfam PF00581 Rhodanese-like domain 35 120 8.0E-10 T 15-10-2018 IPR001763 Rhodanese-like domain Trad_1239 8ee6460395d31591ac28e5307065a5f6 127 SUPERFAMILY SSF52821 14 127 7.33E-31 T 15-10-2018 IPR036873 Rhodanese-like domain superfamily Trad_1239 8ee6460395d31591ac28e5307065a5f6 127 SMART SM00450 30 124 3.9E-17 T 15-10-2018 IPR001763 Rhodanese-like domain Trad_0681 da154e69f4349c07caa0fb796ef05a46 566 SUPERFAMILY SSF49299 30 109 1.83E-14 T 15-10-2018 IPR035986 PKD domain superfamily Trad_0681 da154e69f4349c07caa0fb796ef05a46 566 SUPERFAMILY SSF49299 115 203 4.71E-19 T 15-10-2018 IPR035986 PKD domain superfamily Trad_0681 da154e69f4349c07caa0fb796ef05a46 566 Gene3D G3DSA:2.60.40.10 28 111 4.6E-15 T 15-10-2018 IPR013783 Immunoglobulin-like fold Trad_0681 da154e69f4349c07caa0fb796ef05a46 566 Gene3D G3DSA:2.60.40.10 314 398 2.4E-18 T 15-10-2018 IPR013783 Immunoglobulin-like fold Trad_0681 da154e69f4349c07caa0fb796ef05a46 566 SUPERFAMILY SSF49299 223 307 3.01E-18 T 15-10-2018 IPR035986 PKD domain superfamily Trad_0681 da154e69f4349c07caa0fb796ef05a46 566 SUPERFAMILY SSF49299 312 393 2.75E-22 T 15-10-2018 IPR035986 PKD domain superfamily Trad_0681 da154e69f4349c07caa0fb796ef05a46 566 Gene3D G3DSA:2.60.40.10 112 203 4.6E-21 T 15-10-2018 IPR013783 Immunoglobulin-like fold Trad_0681 da154e69f4349c07caa0fb796ef05a46 566 Gene3D G3DSA:2.60.40.10 219 308 1.4E-21 T 15-10-2018 IPR013783 Immunoglobulin-like fold Trad_0681 da154e69f4349c07caa0fb796ef05a46 566 Pfam PF00801 PKD domain 129 194 1.8E-15 T 15-10-2018 IPR000601 PKD domain Trad_0681 da154e69f4349c07caa0fb796ef05a46 566 Pfam PF00801 PKD domain 328 382 5.7E-14 T 15-10-2018 IPR000601 PKD domain Trad_0681 da154e69f4349c07caa0fb796ef05a46 566 Pfam PF00801 PKD domain 238 297 6.9E-14 T 15-10-2018 IPR000601 PKD domain Trad_0681 da154e69f4349c07caa0fb796ef05a46 566 Pfam PF00801 PKD domain 40 92 3.1E-8 T 15-10-2018 IPR000601 PKD domain Trad_0681 da154e69f4349c07caa0fb796ef05a46 566 SMART SM00089 319 395 7.1E-14 T 15-10-2018 IPR022409 PKD/Chitinase domain Trad_0681 da154e69f4349c07caa0fb796ef05a46 566 SMART SM00089 28 109 5.4E-14 T 15-10-2018 IPR022409 PKD/Chitinase domain Trad_0681 da154e69f4349c07caa0fb796ef05a46 566 SMART SM00089 119 204 1.5E-16 T 15-10-2018 IPR022409 PKD/Chitinase domain Trad_0681 da154e69f4349c07caa0fb796ef05a46 566 SMART SM00089 227 309 6.3E-19 T 15-10-2018 IPR022409 PKD/Chitinase domain Trad_1325 4da8107840c23bd6c0d5f685b4175ba1 212 SUPERFAMILY SSF53335 35 204 1.52E-21 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Trad_1325 4da8107840c23bd6c0d5f685b4175ba1 212 Gene3D G3DSA:3.40.50.150 15 201 1.6E-19 T 15-10-2018 Trad_1325 4da8107840c23bd6c0d5f685b4175ba1 212 Pfam PF13649 Methyltransferase domain 50 140 1.2E-9 T 15-10-2018 Trad_0946 ab3c3452a2e60880346eb9aad7d084e1 336 SUPERFAMILY SSF53822 61 324 9.42E-69 T 15-10-2018 IPR028082 Periplasmic binding protein-like I Trad_0946 ab3c3452a2e60880346eb9aad7d084e1 336 Gene3D G3DSA:1.10.260.40 5 58 1.0E-19 T 15-10-2018 Trad_0946 ab3c3452a2e60880346eb9aad7d084e1 336 SMART SM00354 5 74 3.9E-25 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Trad_0946 ab3c3452a2e60880346eb9aad7d084e1 336 Pfam PF13377 Periplasmic binding protein-like domain 177 330 5.4E-36 T 15-10-2018 Trad_0946 ab3c3452a2e60880346eb9aad7d084e1 336 Gene3D G3DSA:3.40.50.2300 59 308 1.5E-74 T 15-10-2018 Trad_0946 ab3c3452a2e60880346eb9aad7d084e1 336 SUPERFAMILY SSF47413 5 62 1.41E-14 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Trad_0946 ab3c3452a2e60880346eb9aad7d084e1 336 Gene3D G3DSA:3.40.50.2300 167 291 1.5E-74 T 15-10-2018 Trad_0946 ab3c3452a2e60880346eb9aad7d084e1 336 Pfam PF00356 Bacterial regulatory proteins, lacI family 7 51 2.7E-13 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Trad_0946 ab3c3452a2e60880346eb9aad7d084e1 336 ProSitePatterns PS00356 LacI-type HTH domain signature. 8 26 - T 15-10-2018 Trad_1359 fc4dce88bd99d8e9d3219689726fae72 447 SUPERFAMILY SSF50156 77 188 1.48E-18 T 15-10-2018 IPR036034 PDZ superfamily GO:0005515 Trad_1359 fc4dce88bd99d8e9d3219689726fae72 447 SUPERFAMILY SSF52096 42 370 1.62E-68 T 15-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Trad_1359 fc4dce88bd99d8e9d3219689726fae72 447 Gene3D G3DSA:3.30.750.44 48 338 1.3E-88 T 15-10-2018 Trad_1359 fc4dce88bd99d8e9d3219689726fae72 447 SMART SM00228 99 174 5.7E-13 T 15-10-2018 IPR001478 PDZ domain GO:0005515 Trad_1359 fc4dce88bd99d8e9d3219689726fae72 447 Gene3D G3DSA:2.30.42.10 99 190 1.3E-88 T 15-10-2018 Trad_1359 fc4dce88bd99d8e9d3219689726fae72 447 Pfam PF03572 Peptidase family S41 202 360 8.0E-49 T 15-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 Trad_1359 fc4dce88bd99d8e9d3219689726fae72 447 Pfam PF13180 PDZ domain 100 177 3.6E-10 T 15-10-2018 IPR001478 PDZ domain GO:0005515 Trad_1359 fc4dce88bd99d8e9d3219689726fae72 447 Gene3D G3DSA:3.90.226.10 191 360 1.3E-88 T 15-10-2018 Trad_1359 fc4dce88bd99d8e9d3219689726fae72 447 SMART SM00245 176 363 1.0E-48 T 15-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 Trad_1359 fc4dce88bd99d8e9d3219689726fae72 447 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 53 365 1.4E-84 T 15-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 Trad_1965 e57596b2f0214718ef5a994c5961756e 147 SUPERFAMILY SSF52402 1 147 2.93E-23 T 15-10-2018 Trad_1965 e57596b2f0214718ef5a994c5961756e 147 Pfam PF00582 Universal stress protein family 1 147 6.8E-18 T 15-10-2018 IPR006016 UspA Trad_1965 e57596b2f0214718ef5a994c5961756e 147 Gene3D G3DSA:3.40.50.620 1 147 4.1E-24 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Trad_2819 f3ebd8f557c02734b880c568e12bfc10 134 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 2 127 10.727 T 15-10-2018 IPR022907 VapC family GO:0004540 Trad_2819 f3ebd8f557c02734b880c568e12bfc10 134 Pfam PF01850 PIN domain 2 120 1.0E-11 T 15-10-2018 IPR002716 PIN domain Trad_2819 f3ebd8f557c02734b880c568e12bfc10 134 Gene3D G3DSA:3.40.50.1010 1 123 8.3E-25 T 15-10-2018 Trad_2819 f3ebd8f557c02734b880c568e12bfc10 134 SUPERFAMILY SSF88723 2 123 3.36E-16 T 15-10-2018 IPR029060 PIN-like domain superfamily Trad_2118 637a0846f477e070654d41f6de9a02cb 461 PIRSF PIRSF000350 1 449 7.8E-90 T 15-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 Trad_2118 637a0846f477e070654d41f6de9a02cb 461 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 318 5.2E-68 T 15-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Trad_2118 637a0846f477e070654d41f6de9a02cb 461 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 132 141 3.4E-72 T 15-10-2018 Trad_2118 637a0846f477e070654d41f6de9a02cb 461 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 419 439 3.4E-72 T 15-10-2018 Trad_2118 637a0846f477e070654d41f6de9a02cb 461 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 298 305 3.4E-72 T 15-10-2018 Trad_2118 637a0846f477e070654d41f6de9a02cb 461 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 332 353 3.4E-72 T 15-10-2018 Trad_2118 637a0846f477e070654d41f6de9a02cb 461 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 256 270 3.4E-72 T 15-10-2018 Trad_2118 637a0846f477e070654d41f6de9a02cb 461 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 36 51 3.4E-72 T 15-10-2018 Trad_2118 637a0846f477e070654d41f6de9a02cb 461 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 168 193 3.4E-72 T 15-10-2018 Trad_2118 637a0846f477e070654d41f6de9a02cb 461 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 397 412 3.4E-72 T 15-10-2018 Trad_2118 637a0846f477e070654d41f6de9a02cb 461 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 3.4E-72 T 15-10-2018 Trad_2118 637a0846f477e070654d41f6de9a02cb 461 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 3 455 3.6E-167 T 15-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 Trad_2118 637a0846f477e070654d41f6de9a02cb 461 Gene3D G3DSA:3.30.390.30 336 458 7.7E-46 T 15-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Trad_2118 637a0846f477e070654d41f6de9a02cb 461 Gene3D G3DSA:3.50.50.60 141 262 9.1E-121 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Trad_2118 637a0846f477e070654d41f6de9a02cb 461 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 37 47 - T 15-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 Trad_2118 637a0846f477e070654d41f6de9a02cb 461 SUPERFAMILY SSF55424 335 455 1.89E-41 T 15-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Trad_2118 637a0846f477e070654d41f6de9a02cb 461 SUPERFAMILY SSF51905 1 361 5.53E-61 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Trad_2118 637a0846f477e070654d41f6de9a02cb 461 Gene3D G3DSA:3.50.50.60 3 324 9.1E-121 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Trad_2118 637a0846f477e070654d41f6de9a02cb 461 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 255 271 1.7E-37 T 15-10-2018 Trad_2118 637a0846f477e070654d41f6de9a02cb 461 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 283 305 1.7E-37 T 15-10-2018 Trad_2118 637a0846f477e070654d41f6de9a02cb 461 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 168 186 1.7E-37 T 15-10-2018 Trad_2118 637a0846f477e070654d41f6de9a02cb 461 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 129 147 1.7E-37 T 15-10-2018 Trad_2118 637a0846f477e070654d41f6de9a02cb 461 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 1.7E-37 T 15-10-2018 Trad_2118 637a0846f477e070654d41f6de9a02cb 461 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 336 444 9.3E-37 T 15-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 Trad_2478 f497a78982d8ef2de30da09d9ec5d939 179 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 14 144 6.0E-5 T 15-10-2018 Trad_2478 f497a78982d8ef2de30da09d9ec5d939 179 SUPERFAMILY SSF160369 1 171 3.14E-47 T 15-10-2018 Trad_2478 f497a78982d8ef2de30da09d9ec5d939 179 Gene3D G3DSA:3.30.70.1730 1 134 4.7E-36 T 15-10-2018 Trad_2478 f497a78982d8ef2de30da09d9ec5d939 179 Pfam PF00466 Ribosomal protein L10 3 99 8.0E-24 T 15-10-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 Trad_2478 f497a78982d8ef2de30da09d9ec5d939 179 ProSitePatterns PS01109 Ribosomal protein L10 signature. 6 40 - T 15-10-2018 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Trad_2478 f497a78982d8ef2de30da09d9ec5d939 179 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 1 161 24.291 T 15-10-2018 IPR022973 Ribosomal protein L10 Trad_0122 9ebdf4835910d2e0373d916c982fa426 450 SUPERFAMILY SSF51905 1 421 1.0E-67 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Trad_0122 9ebdf4835910d2e0373d916c982fa426 450 SUPERFAMILY SSF54373 262 368 3.24E-13 T 15-10-2018 Trad_0122 9ebdf4835910d2e0373d916c982fa426 450 Pfam PF01593 Flavin containing amine oxidoreductase 10 417 2.8E-68 T 15-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 Trad_0122 9ebdf4835910d2e0373d916c982fa426 450 PRINTS PR00757 Flavin-containing amine oxidase signature 399 416 3.7E-7 T 15-10-2018 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 Trad_0122 9ebdf4835910d2e0373d916c982fa426 450 PRINTS PR00757 Flavin-containing amine oxidase signature 2 21 3.7E-7 T 15-10-2018 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 Trad_0122 9ebdf4835910d2e0373d916c982fa426 450 PRINTS PR00757 Flavin-containing amine oxidase signature 348 367 3.7E-7 T 15-10-2018 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 Trad_0122 9ebdf4835910d2e0373d916c982fa426 450 Gene3D G3DSA:3.50.50.60 1 426 6.5E-86 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Trad_0336 b24f4432ef5b369e2f64a4ae84b21282 400 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 4 384 1.9E-169 T 15-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Trad_0336 b24f4432ef5b369e2f64a4ae84b21282 400 SUPERFAMILY SSF55973 238 384 1.41E-64 T 15-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Trad_0336 b24f4432ef5b369e2f64a4ae84b21282 400 Gene3D G3DSA:3.30.300.10 101 379 2.1E-166 T 15-10-2018 Trad_0336 b24f4432ef5b369e2f64a4ae84b21282 400 SUPERFAMILY SSF55973 115 237 8.63E-49 T 15-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Trad_0336 b24f4432ef5b369e2f64a4ae84b21282 400 SUPERFAMILY SSF55973 3 107 3.85E-41 T 15-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Trad_0336 b24f4432ef5b369e2f64a4ae84b21282 400 Gene3D G3DSA:3.30.300.10 4 239 2.1E-166 T 15-10-2018 Trad_0336 b24f4432ef5b369e2f64a4ae84b21282 400 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 238 375 4.0E-64 T 15-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Trad_0336 b24f4432ef5b369e2f64a4ae84b21282 400 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 264 272 - T 15-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Trad_0336 b24f4432ef5b369e2f64a4ae84b21282 400 PIRSF PIRSF000497 1 387 3.8E-159 T 15-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Trad_0336 b24f4432ef5b369e2f64a4ae84b21282 400 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 121 131 - T 15-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Trad_0336 b24f4432ef5b369e2f64a4ae84b21282 400 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 1 386 53.607 T 15-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Trad_0336 b24f4432ef5b369e2f64a4ae84b21282 400 Gene3D G3DSA:3.30.300.10 9 276 2.1E-166 T 15-10-2018 Trad_0336 b24f4432ef5b369e2f64a4ae84b21282 400 Pfam PF02772 S-adenosylmethionine synthetase, central domain 120 236 2.0E-43 T 15-10-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Trad_0336 b24f4432ef5b369e2f64a4ae84b21282 400 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 3 99 1.8E-36 T 15-10-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Trad_0326 90de293c39059d7f272cf46d95ee20f8 152 PRINTS PR01467 Bacterial arginine repressor signature 90 103 1.2E-16 T 15-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 Trad_0326 90de293c39059d7f272cf46d95ee20f8 152 PRINTS PR01467 Bacterial arginine repressor signature 120 135 1.2E-16 T 15-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 Trad_0326 90de293c39059d7f272cf46d95ee20f8 152 PRINTS PR01467 Bacterial arginine repressor signature 38 53 1.2E-16 T 15-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 Trad_0326 90de293c39059d7f272cf46d95ee20f8 152 PRINTS PR01467 Bacterial arginine repressor signature 22 35 1.2E-16 T 15-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 Trad_0326 90de293c39059d7f272cf46d95ee20f8 152 Pfam PF02863 Arginine repressor, C-terminal domain 84 148 9.2E-19 T 15-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 Trad_0326 90de293c39059d7f272cf46d95ee20f8 152 Pfam PF01316 Arginine repressor, DNA binding domain 3 63 3.2E-21 T 15-10-2018 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 Trad_0326 90de293c39059d7f272cf46d95ee20f8 152 Gene3D G3DSA:1.10.10.10 2 65 4.7E-23 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Trad_0326 90de293c39059d7f272cf46d95ee20f8 152 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 89 136 1.0E-10 T 15-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 Trad_0326 90de293c39059d7f272cf46d95ee20f8 152 Hamap MF_00173 Arginine repressor [argR]. 1 152 49.039 T 15-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 Trad_0326 90de293c39059d7f272cf46d95ee20f8 152 Gene3D G3DSA:3.30.1360.40 70 151 5.7E-19 T 15-10-2018 Trad_0326 90de293c39059d7f272cf46d95ee20f8 152 SUPERFAMILY SSF46785 2 65 8.36E-18 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Trad_0326 90de293c39059d7f272cf46d95ee20f8 152 TIGRFAM TIGR01529 argR_whole: arginine repressor 7 151 9.4E-42 T 15-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 Trad_0326 90de293c39059d7f272cf46d95ee20f8 152 SUPERFAMILY SSF55252 85 150 8.63E-14 T 15-10-2018 IPR036251 Arginine repressor, C-terminal domain superfamily GO:0034618|GO:0051259 Trad_0777 8da1efcde8efed98e35e45cdff08d3a7 621 PRINTS PR00344 Bacterial sensor protein C-terminal signature 607 620 3.0E-6 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Trad_0777 8da1efcde8efed98e35e45cdff08d3a7 621 PRINTS PR00344 Bacterial sensor protein C-terminal signature 583 601 3.0E-6 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Trad_0777 8da1efcde8efed98e35e45cdff08d3a7 621 PRINTS PR00344 Bacterial sensor protein C-terminal signature 561 575 3.0E-6 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Trad_0777 8da1efcde8efed98e35e45cdff08d3a7 621 Gene3D G3DSA:3.30.450.40 250 407 4.4E-26 T 15-10-2018 IPR029016 GAF-like domain superfamily Trad_0777 8da1efcde8efed98e35e45cdff08d3a7 621 Gene3D G3DSA:3.30.565.10 485 621 1.2E-27 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Trad_0777 8da1efcde8efed98e35e45cdff08d3a7 621 Gene3D G3DSA:3.30.450.40 116 249 4.1E-5 T 15-10-2018 IPR029016 GAF-like domain superfamily Trad_0777 8da1efcde8efed98e35e45cdff08d3a7 621 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 528 620 3.0E-9 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Trad_0777 8da1efcde8efed98e35e45cdff08d3a7 621 Pfam PF13185 GAF domain 268 399 1.2E-14 T 15-10-2018 IPR003018 GAF domain GO:0005515 Trad_0777 8da1efcde8efed98e35e45cdff08d3a7 621 Pfam PF07730 Histidine kinase 416 486 7.9E-18 T 15-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 Trad_0777 8da1efcde8efed98e35e45cdff08d3a7 621 SMART SM00065 268 409 5.5E-14 T 15-10-2018 IPR003018 GAF domain GO:0005515 Trad_0777 8da1efcde8efed98e35e45cdff08d3a7 621 SUPERFAMILY SSF55781 249 405 6.11E-25 T 15-10-2018 Trad_0777 8da1efcde8efed98e35e45cdff08d3a7 621 SUPERFAMILY SSF55874 490 620 1.05E-19 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Trad_2455 5e741a11fdb6b0f7202411a59f724804 381 SUPERFAMILY SSF109604 200 375 7.54E-38 T 15-10-2018 Trad_2455 5e741a11fdb6b0f7202411a59f724804 381 SMART SM00471 210 346 1.9E-11 T 15-10-2018 IPR003607 HD/PDEase domain Trad_2455 5e741a11fdb6b0f7202411a59f724804 381 SUPERFAMILY SSF55781 49 184 2.7E-11 T 15-10-2018 Trad_2455 5e741a11fdb6b0f7202411a59f724804 381 Gene3D G3DSA:3.30.450.40 15 188 1.2E-12 T 15-10-2018 IPR029016 GAF-like domain superfamily Trad_2455 5e741a11fdb6b0f7202411a59f724804 381 Gene3D G3DSA:1.10.3210.10 191 378 2.7E-70 T 15-10-2018 Trad_2455 5e741a11fdb6b0f7202411a59f724804 381 Pfam PF01966 HD domain 217 336 2.6E-21 T 15-10-2018 IPR006674 HD domain Trad_2455 5e741a11fdb6b0f7202411a59f724804 381 TIGRFAM TIGR00277 HDIG: HDIG domain 213 304 5.5E-9 T 15-10-2018 IPR006675 HDIG domain Trad_0365 de493cd90432cda3d74b0af16de6391d 320 SUPERFAMILY SSF81606 12 244 1.57E-63 T 15-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Trad_0365 de493cd90432cda3d74b0af16de6391d 320 Pfam PF13672 Protein phosphatase 2C 23 207 1.3E-18 T 15-10-2018 Trad_0365 de493cd90432cda3d74b0af16de6391d 320 SMART SM00332 8 243 1.2E-21 T 15-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Trad_0365 de493cd90432cda3d74b0af16de6391d 320 Gene3D G3DSA:3.60.40.10 3 245 3.7E-64 T 15-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Trad_0365 de493cd90432cda3d74b0af16de6391d 320 SMART SM00331 17 245 4.0E-34 T 15-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Trad_1752 82f6f061063f975601db5eee402c8731 430 TIGRFAM TIGR00032 argG: argininosuccinate synthase 23 412 2.2E-155 T 15-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Trad_1752 82f6f061063f975601db5eee402c8731 430 Pfam PF00764 Arginosuccinate synthase 25 411 5.5E-162 T 15-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Trad_1752 82f6f061063f975601db5eee402c8731 430 Gene3D G3DSA:3.90.1260.10 193 421 6.5E-102 T 15-10-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Trad_1752 82f6f061063f975601db5eee402c8731 430 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 27 35 - T 15-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Trad_1752 82f6f061063f975601db5eee402c8731 430 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 135 146 - T 15-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Trad_1752 82f6f061063f975601db5eee402c8731 430 SUPERFAMILY SSF69864 190 416 3.92E-95 T 15-10-2018 Trad_1752 82f6f061063f975601db5eee402c8731 430 Hamap MF_00005 Argininosuccinate synthase [argG]. 21 416 53.804 T 15-10-2018 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Trad_1752 82f6f061063f975601db5eee402c8731 430 SUPERFAMILY SSF52402 22 223 3.75E-51 T 15-10-2018 Trad_1752 82f6f061063f975601db5eee402c8731 430 Gene3D G3DSA:3.40.50.620 22 192 1.5E-70 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Trad_1701 c2708fb5e6205e14e514ebc761ea9eda 325 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 2 303 7.1E-81 T 15-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 Trad_1701 c2708fb5e6205e14e514ebc761ea9eda 325 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 1 305 33.397 T 15-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 Trad_1701 c2708fb5e6205e14e514ebc761ea9eda 325 Gene3D G3DSA:3.40.50.12230 1 310 6.0E-98 T 15-10-2018 Trad_1701 c2708fb5e6205e14e514ebc761ea9eda 325 SUPERFAMILY SSF50486 204 310 8.95E-25 T 15-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 Trad_1701 c2708fb5e6205e14e514ebc761ea9eda 325 Pfam PF00551 Formyl transferase 2 180 5.2E-39 T 15-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Trad_1701 c2708fb5e6205e14e514ebc761ea9eda 325 Pfam PF02911 Formyl transferase, C-terminal domain 204 302 2.5E-24 T 15-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Trad_1701 c2708fb5e6205e14e514ebc761ea9eda 325 SUPERFAMILY SSF53328 2 206 1.57E-61 T 15-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Trad_1967 957ec0f09a8e8e0feeacd866dc290f51 580 SUPERFAMILY SSF53474 32 354 9.96E-32 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold Trad_1967 957ec0f09a8e8e0feeacd866dc290f51 580 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 53 313 4.0E-15 T 15-10-2018 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 Trad_0868 2f4133c69f22ef09e3c382374a6024a8 248 PIRSF PIRSF004808 11 243 3.3E-67 T 15-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 Trad_0868 2f4133c69f22ef09e3c382374a6024a8 248 SUPERFAMILY SSF75217 13 164 4.19E-33 T 15-10-2018 IPR029028 Alpha/beta knot methyltransferases Trad_0868 2f4133c69f22ef09e3c382374a6024a8 248 Gene3D G3DSA:3.40.1280.10 11 167 4.8E-53 T 15-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Trad_0868 2f4133c69f22ef09e3c382374a6024a8 248 Pfam PF00588 SpoU rRNA Methylase family 14 157 1.3E-34 T 15-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 Trad_0868 2f4133c69f22ef09e3c382374a6024a8 248 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 14 237 8.0E-56 T 15-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 Trad_0868 2f4133c69f22ef09e3c382374a6024a8 248 Gene3D G3DSA:1.10.8.590 168 246 6.6E-13 T 15-10-2018 Trad_1866 db5e5354cf0f9841164ccaf491bdf7c5 392 TIGRFAM TIGR04350 C_S_lyase_PatB: putative C-S lyase 15 388 7.8E-121 T 15-10-2018 IPR027619 Putative C-S lyase KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8 Trad_1866 db5e5354cf0f9841164ccaf491bdf7c5 392 SUPERFAMILY SSF53383 17 388 3.06E-97 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Trad_1866 db5e5354cf0f9841164ccaf491bdf7c5 392 Gene3D G3DSA:3.90.1150.10 19 384 6.4E-127 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Trad_1866 db5e5354cf0f9841164ccaf491bdf7c5 392 Gene3D G3DSA:3.40.640.10 62 288 6.4E-127 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Trad_1866 db5e5354cf0f9841164ccaf491bdf7c5 392 Pfam PF00155 Aminotransferase class I and II 44 385 8.4E-39 T 15-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Trad_2037 710abdcf9a485f58d8bb86163f5e8949 669 SUPERFAMILY SSF52317 393 606 3.66E-53 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like Trad_2037 710abdcf9a485f58d8bb86163f5e8949 669 Gene3D G3DSA:3.20.20.80 5 392 2.3E-133 T 15-10-2018 Trad_2037 710abdcf9a485f58d8bb86163f5e8949 669 Gene3D G3DSA:3.40.50.880 393 610 1.5E-58 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like Trad_2037 710abdcf9a485f58d8bb86163f5e8949 669 Pfam PF08533 Beta-galactosidase C-terminal domain 614 660 3.6E-5 T 15-10-2018 IPR013739 Beta-galactosidase C-terminal GO:0004565|GO:0006012 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 Trad_2037 710abdcf9a485f58d8bb86163f5e8949 669 Gene3D G3DSA:2.60.40.1180 612 648 1.6E-6 T 15-10-2018 IPR013780 Glycosyl hydrolase, all-beta Trad_2037 710abdcf9a485f58d8bb86163f5e8949 669 SUPERFAMILY SSF51445 11 388 1.47E-106 T 15-10-2018 IPR017853 Glycoside hydrolase superfamily Trad_2037 710abdcf9a485f58d8bb86163f5e8949 669 PIRSF PIRSF001084 3 663 3.4E-228 T 15-10-2018 IPR003476 Glycoside hydrolase, family 42 GO:0004565|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 Trad_2037 710abdcf9a485f58d8bb86163f5e8949 669 Pfam PF02449 Beta-galactosidase 15 385 3.7E-143 T 15-10-2018 IPR013529 Glycoside hydrolase, family 42, N-terminal GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 Trad_2037 710abdcf9a485f58d8bb86163f5e8949 669 Pfam PF08532 Beta-galactosidase trimerisation domain 396 606 8.7E-60 T 15-10-2018 IPR013738 Beta-galactosidase trimerisation GO:0004565|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 Trad_1175 958c20ed2bb2cd65945c1913ed219d49 1129 SUPERFAMILY SSF82866 288 484 1.12E-42 T 15-10-2018 Trad_1175 958c20ed2bb2cd65945c1913ed219d49 1129 Pfam PF00873 AcrB/AcrD/AcrF family 570 1086 6.6E-84 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Trad_1175 958c20ed2bb2cd65945c1913ed219d49 1129 Pfam PF00873 AcrB/AcrD/AcrF family 5 477 7.5E-118 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Trad_1175 958c20ed2bb2cd65945c1913ed219d49 1129 SUPERFAMILY SSF82714 183 263 3.27E-10 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Trad_1175 958c20ed2bb2cd65945c1913ed219d49 1129 PRINTS PR00702 Acriflavin resistance protein family signature 434 457 8.5E-39 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Trad_1175 958c20ed2bb2cd65945c1913ed219d49 1129 PRINTS PR00702 Acriflavin resistance protein family signature 381 405 8.5E-39 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Trad_1175 958c20ed2bb2cd65945c1913ed219d49 1129 PRINTS PR00702 Acriflavin resistance protein family signature 39 57 8.5E-39 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Trad_1175 958c20ed2bb2cd65945c1913ed219d49 1129 PRINTS PR00702 Acriflavin resistance protein family signature 326 349 8.5E-39 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Trad_1175 958c20ed2bb2cd65945c1913ed219d49 1129 PRINTS PR00702 Acriflavin resistance protein family signature 459 482 8.5E-39 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Trad_1175 958c20ed2bb2cd65945c1913ed219d49 1129 PRINTS PR00702 Acriflavin resistance protein family signature 353 374 8.5E-39 T 15-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Trad_1175 958c20ed2bb2cd65945c1913ed219d49 1129 SUPERFAMILY SSF82693 138 320 4.36E-15 T 15-10-2018 Trad_1175 958c20ed2bb2cd65945c1913ed219d49 1129 SUPERFAMILY SSF82693 625 726 1.36E-10 T 15-10-2018 Trad_1175 958c20ed2bb2cd65945c1913ed219d49 1129 SUPERFAMILY SSF82693 41 134 7.15E-24 T 15-10-2018 Trad_1175 958c20ed2bb2cd65945c1913ed219d49 1129 SUPERFAMILY SSF82714 783 863 4.97E-9 T 15-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Trad_1175 958c20ed2bb2cd65945c1913ed219d49 1129 SUPERFAMILY SSF82866 865 1090 1.44E-39 T 15-10-2018 Trad_0500 ad9916748ab2fa5220472f2fb8ba1b65 306 PRINTS PR00990 Ribokinase signature 31 50 8.2E-5 T 15-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 Trad_0500 ad9916748ab2fa5220472f2fb8ba1b65 306 PRINTS PR00990 Ribokinase signature 215 226 8.2E-5 T 15-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 Trad_0500 ad9916748ab2fa5220472f2fb8ba1b65 306 PRINTS PR00990 Ribokinase signature 171 186 8.2E-5 T 15-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 Trad_0500 ad9916748ab2fa5220472f2fb8ba1b65 306 Pfam PF00294 pfkB family carbohydrate kinase 12 289 1.2E-51 T 15-10-2018 IPR011611 Carbohydrate kinase PfkB Trad_0500 ad9916748ab2fa5220472f2fb8ba1b65 306 PIRSF PIRSF000535 1 306 1.4E-76 T 15-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 Trad_0500 ad9916748ab2fa5220472f2fb8ba1b65 306 Gene3D G3DSA:3.40.1190.20 1 306 3.3E-96 T 15-10-2018 IPR029056 Ribokinase-like Trad_0500 ad9916748ab2fa5220472f2fb8ba1b65 306 SUPERFAMILY SSF53613 1 289 1.01E-68 T 15-10-2018 IPR029056 Ribokinase-like Trad_0500 ad9916748ab2fa5220472f2fb8ba1b65 306 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 2 303 1.9E-91 T 15-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 Trad_1500 0368a88c4523b9c5ae3c16f45cbcb19d 274 SUPERFAMILY SSF54719 152 263 2.23E-40 T 15-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Trad_1500 0368a88c4523b9c5ae3c16f45cbcb19d 274 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 226 233 - T 15-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Trad_1500 0368a88c4523b9c5ae3c16f45cbcb19d 274 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 64 150 7.6E-24 T 15-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Trad_1500 0368a88c4523b9c5ae3c16f45cbcb19d 274 SUPERFAMILY SSF46609 61 152 3.54E-31 T 15-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Trad_1500 0368a88c4523b9c5ae3c16f45cbcb19d 274 Gene3D G3DSA:2.40.500.20 155 270 1.3E-40 T 15-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Trad_1500 0368a88c4523b9c5ae3c16f45cbcb19d 274 Gene3D G3DSA:1.10.287.990 81 150 4.3E-23 T 15-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Trad_1500 0368a88c4523b9c5ae3c16f45cbcb19d 274 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 159 258 2.1E-35 T 15-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Trad_1500 0368a88c4523b9c5ae3c16f45cbcb19d 274 PRINTS PR01703 Manganese superoxide dismutase signature 67 78 1.1E-23 T 15-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Trad_1500 0368a88c4523b9c5ae3c16f45cbcb19d 274 PRINTS PR01703 Manganese superoxide dismutase signature 88 101 1.1E-23 T 15-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Trad_1500 0368a88c4523b9c5ae3c16f45cbcb19d 274 PRINTS PR01703 Manganese superoxide dismutase signature 187 195 1.1E-23 T 15-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Trad_1500 0368a88c4523b9c5ae3c16f45cbcb19d 274 PRINTS PR01703 Manganese superoxide dismutase signature 224 236 1.1E-23 T 15-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Trad_1500 0368a88c4523b9c5ae3c16f45cbcb19d 274 PRINTS PR01703 Manganese superoxide dismutase signature 134 147 1.1E-23 T 15-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Trad_1628 351b54e10e828ddc0562ebe62beedf41 168 SMART SM00422 10 80 1.5E-15 T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Trad_1628 351b54e10e828ddc0562ebe62beedf41 168 SUPERFAMILY SSF46955 10 124 1.54E-24 T 15-10-2018 IPR009061 Putative DNA-binding domain superfamily Trad_1628 351b54e10e828ddc0562ebe62beedf41 168 Pfam PF13411 MerR HTH family regulatory protein 10 78 6.7E-14 T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Trad_1628 351b54e10e828ddc0562ebe62beedf41 168 Gene3D G3DSA:1.10.1660.10 8 139 1.9E-27 T 15-10-2018 Trad_2953 77a4509d97c1f5dd600e0fda48115cf6 126 SUPERFAMILY SSF49764 17 126 2.93E-24 T 15-10-2018 IPR008978 HSP20-like chaperone Trad_2953 77a4509d97c1f5dd600e0fda48115cf6 126 Gene3D G3DSA:2.60.40.790 7 126 7.8E-24 T 15-10-2018 IPR008978 HSP20-like chaperone Trad_2953 77a4509d97c1f5dd600e0fda48115cf6 126 Pfam PF00011 Hsp20/alpha crystallin family 41 125 3.9E-15 T 15-10-2018 IPR002068 Alpha crystallin/Hsp20 domain Trad_2612 c5e705f69ddb655ef07b318955314ce9 227 Pfam PF01551 Peptidase family M23 111 202 2.3E-19 T 15-10-2018 IPR016047 Peptidase M23 Trad_2612 c5e705f69ddb655ef07b318955314ce9 227 Gene3D G3DSA:2.70.70.10 80 221 3.9E-38 T 15-10-2018 IPR011055 Duplicated hybrid motif Trad_2612 c5e705f69ddb655ef07b318955314ce9 227 SUPERFAMILY SSF51261 96 216 3.45E-29 T 15-10-2018 IPR011055 Duplicated hybrid motif Trad_2067 440f3c66f87ec641d10bcf9a1c07abb7 234 Pfam PF04029 2-phosphosulpholactate phosphatase 13 221 4.3E-60 T 15-10-2018 IPR005238 ComB-like GO:0000287|GO:0050532 KEGG: 00680+3.1.3.71 Trad_2067 440f3c66f87ec641d10bcf9a1c07abb7 234 SUPERFAMILY SSF142823 11 222 2.35E-54 T 15-10-2018 IPR036702 ComB-like superfamily GO:0000287|GO:0050532 KEGG: 00680+3.1.3.71 Trad_2067 440f3c66f87ec641d10bcf9a1c07abb7 234 Gene3D G3DSA:3.90.1560.10 3 224 4.2E-64 T 15-10-2018 IPR036702 ComB-like superfamily GO:0000287|GO:0050532 KEGG: 00680+3.1.3.71 Trad_1510 a6c7fa9b1866fcb7509cf2d66d51867e 449 SMART SM01092 340 442 7.5E-35 T 15-10-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal Trad_1510 a6c7fa9b1866fcb7509cf2d66d51867e 449 SUPERFAMILY SSF55447 339 444 2.88E-32 T 15-10-2018 IPR036683 CO dehydrogenase flavoprotein, C-terminal domain superfamily Trad_1510 a6c7fa9b1866fcb7509cf2d66d51867e 449 Gene3D G3DSA:3.30.465.10 169 334 2.0E-58 T 15-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 Trad_1510 a6c7fa9b1866fcb7509cf2d66d51867e 449 SUPERFAMILY SSF54292 16 80 8.83E-15 T 15-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Trad_1510 a6c7fa9b1866fcb7509cf2d66d51867e 449 SUPERFAMILY SSF56176 165 332 5.29E-55 T 15-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Trad_1510 a6c7fa9b1866fcb7509cf2d66d51867e 449 Gene3D G3DSA:3.30.390.50 340 442 1.9E-32 T 15-10-2018 Trad_1510 a6c7fa9b1866fcb7509cf2d66d51867e 449 Gene3D G3DSA:3.10.20.30 1 76 1.3E-24 T 15-10-2018 IPR012675 Beta-grasp domain superfamily Trad_1510 a6c7fa9b1866fcb7509cf2d66d51867e 449 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 340 441 5.0E-34 T 15-10-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal Trad_1510 a6c7fa9b1866fcb7509cf2d66d51867e 449 Pfam PF01799 [2Fe-2S] binding domain 75 142 1.4E-24 T 15-10-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 Trad_1510 a6c7fa9b1866fcb7509cf2d66d51867e 449 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 169 333 2.9E-52 T 15-10-2018 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 Trad_1510 a6c7fa9b1866fcb7509cf2d66d51867e 449 PIRSF PIRSF036557 1 449 4.6E-147 T 15-10-2018 IPR012175 Xanthine dehydrogenase, small subunit, bacteria Trad_1510 a6c7fa9b1866fcb7509cf2d66d51867e 449 Gene3D G3DSA:1.10.150.120 77 153 4.7E-25 T 15-10-2018 Trad_1510 a6c7fa9b1866fcb7509cf2d66d51867e 449 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 37 45 - T 15-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 Trad_1510 a6c7fa9b1866fcb7509cf2d66d51867e 449 SUPERFAMILY SSF47741 86 148 2.75E-25 T 15-10-2018 IPR036884 [2Fe-2S]-binding domain superfamily Trad_2546 be363ea8838eedbb813762b90a129f7a 264 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 10 262 48.871 T 15-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 Trad_2546 be363ea8838eedbb813762b90a129f7a 264 Pfam PF00398 Ribosomal RNA adenine dimethylase 12 259 7.0E-53 T 15-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm Trad_2546 be363ea8838eedbb813762b90a129f7a 264 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 42 69 - T 15-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 Trad_2546 be363ea8838eedbb813762b90a129f7a 264 SUPERFAMILY SSF53335 7 261 2.66E-61 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Trad_2546 be363ea8838eedbb813762b90a129f7a 264 Gene3D G3DSA:1.10.8.100 198 264 1.9E-21 T 15-10-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 Trad_2546 be363ea8838eedbb813762b90a129f7a 264 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 11 260 3.5E-72 T 15-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 Trad_2546 be363ea8838eedbb813762b90a129f7a 264 SMART SM00650 26 194 2.3E-65 T 15-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 Trad_2546 be363ea8838eedbb813762b90a129f7a 264 Gene3D G3DSA:3.40.50.150 1 193 1.7E-63 T 15-10-2018 Trad_0621 00a381a7008212a09a466946bce72e96 304 PRINTS PR00146 Dihydrodipicolinate synthase signature 136 153 2.3E-10 T 15-10-2018 IPR002220 DapA-like GO:0016829 Trad_0621 00a381a7008212a09a466946bce72e96 304 PRINTS PR00146 Dihydrodipicolinate synthase signature 77 95 2.3E-10 T 15-10-2018 IPR002220 DapA-like GO:0016829 Trad_0621 00a381a7008212a09a466946bce72e96 304 PRINTS PR00146 Dihydrodipicolinate synthase signature 41 62 2.3E-10 T 15-10-2018 IPR002220 DapA-like GO:0016829 Trad_0621 00a381a7008212a09a466946bce72e96 304 PIRSF PIRSF001365 4 302 2.1E-72 T 15-10-2018 IPR002220 DapA-like GO:0016829 Trad_0621 00a381a7008212a09a466946bce72e96 304 SMART SM01130 8 300 2.4E-79 T 15-10-2018 IPR002220 DapA-like GO:0016829 Trad_0621 00a381a7008212a09a466946bce72e96 304 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 141 171 - T 15-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 Trad_0621 00a381a7008212a09a466946bce72e96 304 Gene3D G3DSA:3.20.20.70 2 294 6.1E-93 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Trad_0621 00a381a7008212a09a466946bce72e96 304 Pfam PF00701 Dihydrodipicolinate synthetase family 9 294 4.4E-56 T 15-10-2018 IPR002220 DapA-like GO:0016829 Trad_0621 00a381a7008212a09a466946bce72e96 304 SUPERFAMILY SSF51569 5 296 3.14E-77 T 15-10-2018 Trad_1258 38f792f2a67906279f548db4f61191c8 312 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 3 304 1.3E-127 T 15-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Trad_1258 38f792f2a67906279f548db4f61191c8 312 SUPERFAMILY SSF51735 1 140 1.36E-34 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_1258 38f792f2a67906279f548db4f61191c8 312 PRINTS PR01798 Succinyl-CoA synthase signature 226 239 3.3E-40 T 15-10-2018 Trad_1258 38f792f2a67906279f548db4f61191c8 312 PRINTS PR01798 Succinyl-CoA synthase signature 258 275 3.3E-40 T 15-10-2018 Trad_1258 38f792f2a67906279f548db4f61191c8 312 PRINTS PR01798 Succinyl-CoA synthase signature 195 213 3.3E-40 T 15-10-2018 Trad_1258 38f792f2a67906279f548db4f61191c8 312 PRINTS PR01798 Succinyl-CoA synthase signature 100 117 3.3E-40 T 15-10-2018 Trad_1258 38f792f2a67906279f548db4f61191c8 312 Gene3D G3DSA:3.40.50.261 142 307 1.2E-71 T 15-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Trad_1258 38f792f2a67906279f548db4f61191c8 312 Pfam PF00549 CoA-ligase 169 290 2.0E-19 T 15-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Trad_1258 38f792f2a67906279f548db4f61191c8 312 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 254 267 - T 15-10-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site Trad_1258 38f792f2a67906279f548db4f61191c8 312 Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 1 306 40.982 T 15-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Trad_1258 38f792f2a67906279f548db4f61191c8 312 PIRSF PIRSF001553 1 309 1.2E-118 T 15-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Trad_1258 38f792f2a67906279f548db4f61191c8 312 SUPERFAMILY SSF52210 141 305 5.36E-55 T 15-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Trad_1258 38f792f2a67906279f548db4f61191c8 312 Gene3D G3DSA:3.40.50.720 1 141 2.2E-40 T 15-10-2018 Trad_1258 38f792f2a67906279f548db4f61191c8 312 Pfam PF02629 CoA binding domain 7 117 1.7E-19 T 15-10-2018 IPR003781 CoA-binding GO:0048037 Trad_1258 38f792f2a67906279f548db4f61191c8 312 SMART SM00881 4 118 2.6E-19 T 15-10-2018 IPR003781 CoA-binding GO:0048037 Trad_1258 38f792f2a67906279f548db4f61191c8 312 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 170 199 - T 15-10-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site Trad_2489 10bf41b4873f440a5328b9104a3f9bc4 223 Gene3D G3DSA:1.10.10.10 128 223 6.7E-31 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Trad_2489 10bf41b4873f440a5328b9104a3f9bc4 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 220 7.5E-25 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Trad_2489 10bf41b4873f440a5328b9104a3f9bc4 223 SMART SM00862 146 221 1.7E-25 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Trad_2489 10bf41b4873f440a5328b9104a3f9bc4 223 Pfam PF00072 Response regulator receiver domain 7 116 5.9E-28 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Trad_2489 10bf41b4873f440a5328b9104a3f9bc4 223 SMART SM00448 5 115 1.6E-40 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Trad_2489 10bf41b4873f440a5328b9104a3f9bc4 223 Gene3D G3DSA:3.40.50.2300 1 127 1.2E-36 T 15-10-2018 Trad_2489 10bf41b4873f440a5328b9104a3f9bc4 223 SUPERFAMILY SSF52172 4 167 2.64E-40 T 15-10-2018 IPR011006 CheY-like superfamily Trad_0212 6e645fe2ec63a621c79097d80c222bba 342 Gene3D G3DSA:3.90.180.10 1 342 8.2E-98 T 15-10-2018 Trad_0212 6e645fe2ec63a621c79097d80c222bba 342 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 59 73 - T 15-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 Trad_0212 6e645fe2ec63a621c79097d80c222bba 342 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 129 3.0E-30 T 15-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Trad_0212 6e645fe2ec63a621c79097d80c222bba 342 SUPERFAMILY SSF50129 2 167 6.13E-52 T 15-10-2018 IPR011032 GroES-like superfamily Trad_0212 6e645fe2ec63a621c79097d80c222bba 342 SMART SM00829 8 340 3.2E-10 T 15-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Trad_0212 6e645fe2ec63a621c79097d80c222bba 342 Pfam PF00107 Zinc-binding dehydrogenase 176 303 1.5E-27 T 15-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Trad_0212 6e645fe2ec63a621c79097d80c222bba 342 SUPERFAMILY SSF51735 138 309 2.51E-45 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_0082 115225be36954e8c8c2dc33db313bafa 189 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 15 66 1.2E-12 T 15-10-2018 IPR004176 Clp, N-terminal Trad_0082 115225be36954e8c8c2dc33db313bafa 189 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 90 138 5.2E-13 T 15-10-2018 IPR004176 Clp, N-terminal Trad_0082 115225be36954e8c8c2dc33db313bafa 189 SUPERFAMILY SSF81923 4 66 3.14E-7 T 15-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 Trad_0082 115225be36954e8c8c2dc33db313bafa 189 Gene3D G3DSA:1.10.1780.10 1 144 1.4E-35 T 15-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 Trad_0082 115225be36954e8c8c2dc33db313bafa 189 SUPERFAMILY SSF81923 79 138 2.22E-11 T 15-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 Trad_2968 1928dc1710acbd507245429bdf6c76ef 254 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 37 55 1.6E-9 T 15-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Trad_2968 1928dc1710acbd507245429bdf6c76ef 254 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 23 37 1.6E-9 T 15-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Trad_2968 1928dc1710acbd507245429bdf6c76ef 254 SUPERFAMILY SSF100950 74 231 8.69E-28 T 15-10-2018 IPR037171 NagB/RpiA transferase-like Trad_2968 1928dc1710acbd507245429bdf6c76ef 254 Pfam PF08220 DeoR-like helix-turn-helix domain 5 60 1.6E-15 T 15-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Trad_2968 1928dc1710acbd507245429bdf6c76ef 254 Pfam PF00455 DeoR C terminal sensor domain 74 230 1.6E-42 T 15-10-2018 IPR014036 DeoR C-terminal sensor domain Trad_2968 1928dc1710acbd507245429bdf6c76ef 254 SMART SM00420 5 57 2.7E-15 T 15-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Trad_2968 1928dc1710acbd507245429bdf6c76ef 254 Gene3D G3DSA:1.10.10.10 6 62 9.5E-7 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Trad_2968 1928dc1710acbd507245429bdf6c76ef 254 SMART SM01134 72 231 4.0E-50 T 15-10-2018 Trad_2968 1928dc1710acbd507245429bdf6c76ef 254 SUPERFAMILY SSF46785 4 67 5.15E-14 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Trad_2871 d10fefd4806c11626afc4b27b3b47960 345 SUPERFAMILY SSF53448 3 270 9.07E-62 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Trad_2871 d10fefd4806c11626afc4b27b3b47960 345 Gene3D G3DSA:3.90.550.10 2 340 1.3E-109 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Trad_2871 d10fefd4806c11626afc4b27b3b47960 345 SUPERFAMILY SSF159283 276 337 2.75E-13 T 15-10-2018 Trad_2871 d10fefd4806c11626afc4b27b3b47960 345 Pfam PF00483 Nucleotidyl transferase 4 269 1.2E-47 T 15-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Trad_0558 a896aeafe31cf68a96c10fe6879d750d 319 SUPERFAMILY SSF103481 56 159 4.45E-17 T 15-10-2018 Trad_0558 a896aeafe31cf68a96c10fe6879d750d 319 Pfam PF00892 EamA-like transporter family 22 155 2.8E-23 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Trad_0558 a896aeafe31cf68a96c10fe6879d750d 319 Pfam PF00892 EamA-like transporter family 168 299 2.5E-21 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Trad_0558 a896aeafe31cf68a96c10fe6879d750d 319 SUPERFAMILY SSF103481 204 304 1.96E-13 T 15-10-2018 Trad_1400 80400f5af43022b0e733ea419e001f43 154 PRINTS PR00502 NUDIX hydrolase family signature 53 68 6.2E-6 T 15-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Trad_1400 80400f5af43022b0e733ea419e001f43 154 PRINTS PR00502 NUDIX hydrolase family signature 39 53 6.2E-6 T 15-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Trad_1400 80400f5af43022b0e733ea419e001f43 154 SUPERFAMILY SSF55811 12 135 3.52E-25 T 15-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Trad_1400 80400f5af43022b0e733ea419e001f43 154 Pfam PF00293 NUDIX domain 17 130 9.1E-15 T 15-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Trad_1400 80400f5af43022b0e733ea419e001f43 154 Gene3D G3DSA:3.90.79.10 2 153 1.6E-35 T 15-10-2018 Trad_1400 80400f5af43022b0e733ea419e001f43 154 ProSitePatterns PS00893 Nudix box signature. 44 65 - T 15-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 Trad_1231 20aa9c79d4544f591de5155492bd285d 333 Gene3D G3DSA:3.30.360.10 140 268 1.8E-99 T 15-10-2018 Trad_1231 20aa9c79d4544f591de5155492bd285d 333 SUPERFAMILY SSF51735 3 149 9.36E-41 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_1231 20aa9c79d4544f591de5155492bd285d 333 TIGRFAM TIGR04380 myo_inos_iolG: inositol 2-dehydrogenase 3 326 4.7E-124 T 15-10-2018 IPR030827 Inositol 2-dehydrogenase Trad_1231 20aa9c79d4544f591de5155492bd285d 333 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 163 237 1.3E-6 T 15-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 Trad_1231 20aa9c79d4544f591de5155492bd285d 333 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 4 121 1.5E-23 T 15-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 Trad_1231 20aa9c79d4544f591de5155492bd285d 333 Gene3D G3DSA:3.40.50.720 5 317 1.8E-99 T 15-10-2018 Trad_1231 20aa9c79d4544f591de5155492bd285d 333 SUPERFAMILY SSF55347 126 299 6.28E-29 T 15-10-2018 Trad_0825 3756ab4811df038b4b006d759b4bac55 336 Gene3D G3DSA:3.40.50.300 9 248 2.3E-66 T 15-10-2018 Trad_0825 3756ab4811df038b4b006d759b4bac55 336 SMART SM00382 44 226 1.6E-12 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_0825 3756ab4811df038b4b006d759b4bac55 336 SUPERFAMILY SSF52540 18 239 7.1E-61 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_0825 3756ab4811df038b4b006d759b4bac55 336 Pfam PF00005 ABC transporter 37 179 8.1E-28 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Trad_2922 173e5a143dafcfd527b533ee76dc7e49 101 SUPERFAMILY SSF51182 9 100 9.52E-21 T 15-10-2018 IPR011051 RmlC-like cupin domain superfamily Trad_2922 173e5a143dafcfd527b533ee76dc7e49 101 Pfam PF07883 Cupin domain 25 95 8.1E-18 T 15-10-2018 IPR013096 Cupin 2, conserved barrel Trad_2922 173e5a143dafcfd527b533ee76dc7e49 101 Gene3D G3DSA:2.60.120.10 10 101 4.3E-25 T 15-10-2018 IPR014710 RmlC-like jelly roll fold Trad_2480 5649bb3292aa6ea713f3388d3aeaa805 145 SUPERFAMILY SSF46906 67 140 2.35E-24 T 15-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily Trad_2480 5649bb3292aa6ea713f3388d3aeaa805 145 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 66 1.3E-27 T 15-10-2018 IPR020784 Ribosomal protein L11, N-terminal Trad_2480 5649bb3292aa6ea713f3388d3aeaa805 145 SMART SM00649 9 140 3.6E-77 T 15-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 Trad_2480 5649bb3292aa6ea713f3388d3aeaa805 145 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 141 29.575 T 15-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 Trad_2480 5649bb3292aa6ea713f3388d3aeaa805 145 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 140 1.7E-58 T 15-10-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_2480 5649bb3292aa6ea713f3388d3aeaa805 145 Gene3D G3DSA:1.10.10.250 72 140 1.0E-25 T 15-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily Trad_2480 5649bb3292aa6ea713f3388d3aeaa805 145 Pfam PF00298 Ribosomal protein L11, RNA binding domain 71 139 8.9E-22 T 15-10-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 Trad_2480 5649bb3292aa6ea713f3388d3aeaa805 145 ProSitePatterns PS00359 Ribosomal protein L11 signature. 126 141 - T 15-10-2018 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Trad_2480 5649bb3292aa6ea713f3388d3aeaa805 145 SUPERFAMILY SSF54747 3 72 8.63E-28 T 15-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily Trad_2480 5649bb3292aa6ea713f3388d3aeaa805 145 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 73 6.0E-12 T 15-10-2018 Trad_2480 5649bb3292aa6ea713f3388d3aeaa805 145 Gene3D G3DSA:3.30.1550.10 2 71 1.3E-31 T 15-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily Trad_1860 c7e82d93fa3c8c6a13b7a3844534ca12 465 Gene3D G3DSA:1.10.275.10 6 139 2.4E-61 T 15-10-2018 IPR024083 Fumarase/histidase, N-terminal Trad_1860 c7e82d93fa3c8c6a13b7a3844534ca12 465 Gene3D G3DSA:1.20.200.10 140 407 7.0E-114 T 15-10-2018 Trad_1860 c7e82d93fa3c8c6a13b7a3844534ca12 465 Pfam PF00206 Lyase 13 343 9.9E-114 T 15-10-2018 IPR022761 Fumarate lyase, N-terminal Trad_1860 c7e82d93fa3c8c6a13b7a3844534ca12 465 PRINTS PR00149 Fumarate lyase superfamily signature 272 299 1.8E-33 T 15-10-2018 IPR000362 Fumarate lyase family Trad_1860 c7e82d93fa3c8c6a13b7a3844534ca12 465 PRINTS PR00149 Fumarate lyase superfamily signature 135 153 1.8E-33 T 15-10-2018 IPR000362 Fumarate lyase family Trad_1860 c7e82d93fa3c8c6a13b7a3844534ca12 465 PRINTS PR00149 Fumarate lyase superfamily signature 181 199 1.8E-33 T 15-10-2018 IPR000362 Fumarate lyase family Trad_1860 c7e82d93fa3c8c6a13b7a3844534ca12 465 PRINTS PR00149 Fumarate lyase superfamily signature 318 334 1.8E-33 T 15-10-2018 IPR000362 Fumarate lyase family Trad_1860 c7e82d93fa3c8c6a13b7a3844534ca12 465 SUPERFAMILY SSF48557 5 463 1.88E-157 T 15-10-2018 IPR008948 L-Aspartase-like GO:0003824 Trad_1860 c7e82d93fa3c8c6a13b7a3844534ca12 465 TIGRFAM TIGR00979 fumC_II: fumarate hydratase, class II 5 462 3.9E-238 T 15-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Trad_1860 c7e82d93fa3c8c6a13b7a3844534ca12 465 ProSitePatterns PS00163 Fumarate lyases signature. 318 327 - T 15-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 Trad_1860 c7e82d93fa3c8c6a13b7a3844534ca12 465 Gene3D G3DSA:1.10.40.30 409 465 6.1E-27 T 15-10-2018 Trad_1860 c7e82d93fa3c8c6a13b7a3844534ca12 465 Pfam PF10415 Fumarase C C-terminus 409 462 1.1E-23 T 15-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Trad_1860 c7e82d93fa3c8c6a13b7a3844534ca12 465 Hamap MF_00743 Fumarate hydratase class II [fumC]. 5 463 89.637 T 15-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Trad_2185 576848ec376a8b6955bccb501c4c3fda 273 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 160 188 - T 15-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Trad_2185 576848ec376a8b6955bccb501c4c3fda 273 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 100 111 3.7E-12 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2185 576848ec376a8b6955bccb501c4c3fda 273 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 161 3.7E-12 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2185 576848ec376a8b6955bccb501c4c3fda 273 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 173 192 3.7E-12 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2185 576848ec376a8b6955bccb501c4c3fda 273 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 33 265 8.8E-64 T 15-10-2018 Trad_2185 576848ec376a8b6955bccb501c4c3fda 273 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 25 207 8.0E-4 T 15-10-2018 Trad_2185 576848ec376a8b6955bccb501c4c3fda 273 SUPERFAMILY SSF51735 23 267 2.0E-83 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_2185 576848ec376a8b6955bccb501c4c3fda 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 163 9.9E-39 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2185 576848ec376a8b6955bccb501c4c3fda 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 192 9.9E-39 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2185 576848ec376a8b6955bccb501c4c3fda 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 100 111 9.9E-39 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2185 576848ec376a8b6955bccb501c4c3fda 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 26 43 9.9E-39 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2185 576848ec376a8b6955bccb501c4c3fda 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 194 211 9.9E-39 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2185 576848ec376a8b6955bccb501c4c3fda 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 229 249 9.9E-39 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2185 576848ec376a8b6955bccb501c4c3fda 273 Gene3D G3DSA:3.40.50.720 7 268 9.8E-83 T 15-10-2018 Trad_1249 b6a2b979816224afbff97512c62cab4e 339 Pfam PF13407 Periplasmic binding protein domain 21 276 4.2E-62 T 15-10-2018 IPR025997 Periplasmic binding protein Trad_1249 b6a2b979816224afbff97512c62cab4e 339 TIGRFAM TIGR02634 xylF: D-xylose ABC transporter, D-xylose-binding protein 21 324 7.5E-136 T 15-10-2018 IPR013456 D-xylose ABC transporter, substrate-binding protein GO:0015753|GO:0048029 Trad_1249 b6a2b979816224afbff97512c62cab4e 339 Gene3D G3DSA:3.40.50.2300 22 301 8.2E-98 T 15-10-2018 Trad_1249 b6a2b979816224afbff97512c62cab4e 339 SUPERFAMILY SSF53822 20 312 2.36E-70 T 15-10-2018 IPR028082 Periplasmic binding protein-like I Trad_1249 b6a2b979816224afbff97512c62cab4e 339 Gene3D G3DSA:3.40.50.2300 121 312 8.2E-98 T 15-10-2018 Trad_0990 96ef0238f37884732236f4a7b689f1cc 138 Gene3D G3DSA:2.60.40.10 48 135 5.5E-12 T 15-10-2018 IPR013783 Immunoglobulin-like fold Trad_0990 96ef0238f37884732236f4a7b689f1cc 138 SUPERFAMILY SSF49299 51 133 2.62E-12 T 15-10-2018 IPR035986 PKD domain superfamily Trad_0990 96ef0238f37884732236f4a7b689f1cc 138 Pfam PF00801 PKD domain 69 121 1.7E-8 T 15-10-2018 IPR000601 PKD domain Trad_0990 96ef0238f37884732236f4a7b689f1cc 138 SMART SM00089 55 136 5.6E-8 T 15-10-2018 IPR022409 PKD/Chitinase domain Trad_0409 414bf93140cf1a022929ab5192be17b1 537 Gene3D G3DSA:2.30.40.10 14 510 2.3E-132 T 15-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Trad_0409 414bf93140cf1a022929ab5192be17b1 537 Gene3D G3DSA:3.10.310.70 85 204 2.3E-132 T 15-10-2018 Trad_0409 414bf93140cf1a022929ab5192be17b1 537 Pfam PF07969 Amidohydrolase family 55 535 6.9E-99 T 15-10-2018 IPR013108 Amidohydrolase 3 Trad_0409 414bf93140cf1a022929ab5192be17b1 537 SUPERFAMILY SSF51556 66 494 2.62E-40 T 15-10-2018 IPR032466 Metal-dependent hydrolase Trad_0409 414bf93140cf1a022929ab5192be17b1 537 Gene3D G3DSA:3.20.20.140 67 494 2.3E-132 T 15-10-2018 Trad_0409 414bf93140cf1a022929ab5192be17b1 537 SUPERFAMILY SSF51338 5 535 8.46E-22 T 15-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Trad_2148 f91ec4114bb8db25d962a0397c751f2d 412 Hamap MF_00226_B Putative competence-damage inducible protein [cinA]. 1 412 133.645 T 15-10-2018 IPR008135 Competence-induced protein CinA Trad_2148 f91ec4114bb8db25d962a0397c751f2d 412 PIRSF PIRSF006728 1 412 7.4E-121 T 15-10-2018 IPR008135 Competence-induced protein CinA Trad_2148 f91ec4114bb8db25d962a0397c751f2d 412 Pfam PF02464 Competence-damaged protein 257 408 6.1E-41 T 15-10-2018 IPR008136 CinA, C-terminal Trad_2148 f91ec4114bb8db25d962a0397c751f2d 412 SMART SM00852 4 174 8.5E-31 T 15-10-2018 IPR001453 MoaB/Mog domain Trad_2148 f91ec4114bb8db25d962a0397c751f2d 412 Gene3D G3DSA:3.40.980.10 1 176 2.1E-47 T 15-10-2018 IPR036425 MoaB/Mog-like domain superfamily Trad_2148 f91ec4114bb8db25d962a0397c751f2d 412 Gene3D G3DSA:3.90.950.20 248 411 1.9E-43 T 15-10-2018 IPR036653 CinA-like, C-terminal Trad_2148 f91ec4114bb8db25d962a0397c751f2d 412 SUPERFAMILY SSF142433 252 409 8.24E-41 T 15-10-2018 IPR036653 CinA-like, C-terminal Trad_2148 f91ec4114bb8db25d962a0397c751f2d 412 Pfam PF00994 Probable molybdopterin binding domain 5 173 3.2E-29 T 15-10-2018 IPR001453 MoaB/Mog domain Trad_2148 f91ec4114bb8db25d962a0397c751f2d 412 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 265 407 4.1E-28 T 15-10-2018 IPR008136 CinA, C-terminal Trad_2148 f91ec4114bb8db25d962a0397c751f2d 412 TIGRFAM TIGR00200 cinA_nterm: competence/damage-inducible protein CinA N-terminal domain 1 405 5.0E-91 T 15-10-2018 IPR008135 Competence-induced protein CinA Trad_2148 f91ec4114bb8db25d962a0397c751f2d 412 SUPERFAMILY SSF53218 1 203 1.96E-32 T 15-10-2018 IPR036425 MoaB/Mog-like domain superfamily Trad_2770 834c968a431f6d960c9086e42b761c8c 126 SMART SM00448 2 116 9.2E-22 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Trad_2770 834c968a431f6d960c9086e42b761c8c 126 Gene3D G3DSA:3.40.50.2300 3 124 1.5E-26 T 15-10-2018 Trad_2770 834c968a431f6d960c9086e42b761c8c 126 SUPERFAMILY SSF52172 3 121 5.12E-29 T 15-10-2018 IPR011006 CheY-like superfamily Trad_2770 834c968a431f6d960c9086e42b761c8c 126 Pfam PF00072 Response regulator receiver domain 4 115 1.7E-19 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Trad_2440 58ccb10336899ddc4fa20a2796724dbe 360 SUPERFAMILY SSF47240 49 319 5.73E-44 T 15-10-2018 IPR009078 Ferritin-like superfamily Trad_2440 58ccb10336899ddc4fa20a2796724dbe 360 Pfam PF03405 Fatty acid desaturase 101 297 1.7E-25 T 15-10-2018 IPR005067 Fatty acid desaturase, type 2 GO:0006631|GO:0045300|GO:0055114 Trad_2440 58ccb10336899ddc4fa20a2796724dbe 360 Gene3D G3DSA:1.10.620.20 43 306 1.3E-45 T 15-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 Trad_0214 8c2dbe68cae14ba5be4067e1b32f0f29 119 Gene3D G3DSA:3.40.1440.10 17 89 1.5E-5 T 15-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 Trad_0214 8c2dbe68cae14ba5be4067e1b32f0f29 119 Pfam PF01541 GIY-YIG catalytic domain 23 59 3.0E-6 T 15-10-2018 IPR000305 GIY-YIG endonuclease Trad_0214 8c2dbe68cae14ba5be4067e1b32f0f29 119 SUPERFAMILY SSF82771 22 57 3.92E-6 T 15-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 Trad_2329 89e00c388a29cf9c80d946c37ffeef01 406 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 4 397 51.909 T 15-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Trad_2329 89e00c388a29cf9c80d946c37ffeef01 406 PIRSF PIRSF001413 2 403 8.4E-156 T 15-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Trad_2329 89e00c388a29cf9c80d946c37ffeef01 406 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 55 384 1.2E-48 T 15-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Trad_2329 89e00c388a29cf9c80d946c37ffeef01 406 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 83 97 - T 15-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Trad_2329 89e00c388a29cf9c80d946c37ffeef01 406 Gene3D G3DSA:3.40.50.1100 56 390 1.7E-181 T 15-10-2018 Trad_2329 89e00c388a29cf9c80d946c37ffeef01 406 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 9 395 2.4E-181 T 15-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Trad_2329 89e00c388a29cf9c80d946c37ffeef01 406 SUPERFAMILY SSF53686 5 393 4.19E-141 T 15-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Trad_2329 89e00c388a29cf9c80d946c37ffeef01 406 Gene3D G3DSA:3.40.50.1100 12 208 1.7E-181 T 15-10-2018 Trad_2638 d7e550db599865e15af526daabbe49a9 302 Gene3D G3DSA:3.10.180.50 8 262 2.8E-84 T 15-10-2018 Trad_2638 d7e550db599865e15af526daabbe49a9 302 Pfam PF07063 Domain of unknown function (DUF1338) 9 294 1.3E-82 T 15-10-2018 IPR009770 Domain of unknown function DUF1338 Trad_2638 d7e550db599865e15af526daabbe49a9 302 SMART SM01150 10 294 4.0E-107 T 15-10-2018 IPR009770 Domain of unknown function DUF1338 Trad_1322 99629e57805378c63b595a12679395a4 494 SUPERFAMILY SSF55298 374 493 9.74E-27 T 15-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Trad_1322 99629e57805378c63b595a12679395a4 494 Pfam PF01042 Endoribonuclease L-PSP 380 491 9.5E-19 T 15-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 Trad_1322 99629e57805378c63b595a12679395a4 494 Gene3D G3DSA:3.20.20.100 19 336 9.6E-56 T 15-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Trad_1322 99629e57805378c63b595a12679395a4 494 Gene3D G3DSA:3.30.1330.40 366 493 1.5E-29 T 15-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Trad_1322 99629e57805378c63b595a12679395a4 494 Pfam PF00248 Aldo/keto reductase family 30 322 2.1E-46 T 15-10-2018 IPR023210 NADP-dependent oxidoreductase domain Trad_1322 99629e57805378c63b595a12679395a4 494 SUPERFAMILY SSF51430 22 330 4.45E-54 T 15-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Trad_0444 ded7841fa6066f6c22f837d2e35ad7aa 657 TIGRFAM TIGR00277 HDIG: HDIG domain 429 527 5.8E-20 T 15-10-2018 IPR006675 HDIG domain Trad_0444 ded7841fa6066f6c22f837d2e35ad7aa 657 SMART SM00471 428 583 1.4E-6 T 15-10-2018 IPR003607 HD/PDEase domain Trad_0444 ded7841fa6066f6c22f837d2e35ad7aa 657 Pfam PF07697 7TM-HD extracellular 51 103 4.4E-8 T 15-10-2018 IPR011624 Metal-dependent phosphohydrolase, 7TM extracellular domain Trad_0444 ded7841fa6066f6c22f837d2e35ad7aa 657 Pfam PF07697 7TM-HD extracellular 109 211 5.1E-11 T 15-10-2018 IPR011624 Metal-dependent phosphohydrolase, 7TM extracellular domain Trad_0444 ded7841fa6066f6c22f837d2e35ad7aa 657 Pfam PF07698 7TM receptor with intracellular HD hydrolase 225 407 1.4E-16 T 15-10-2018 IPR011621 Metal-dependent phosphohydrolase, 7TM intracellular domain Trad_0444 ded7841fa6066f6c22f837d2e35ad7aa 657 Gene3D G3DSA:1.10.3210.10 403 607 6.7E-15 T 15-10-2018 Trad_0444 ded7841fa6066f6c22f837d2e35ad7aa 657 SUPERFAMILY SSF109604 431 573 4.4E-11 T 15-10-2018 Trad_0444 ded7841fa6066f6c22f837d2e35ad7aa 657 Pfam PF01966 HD domain 432 572 1.2E-15 T 15-10-2018 IPR006674 HD domain Trad_1472 7b7e47116b03a9400fad4dc794cceb8a 256 Pfam PF01522 Polysaccharide deacetylase 54 188 3.2E-24 T 15-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 Trad_1472 7b7e47116b03a9400fad4dc794cceb8a 256 SUPERFAMILY SSF88713 21 190 3.71E-33 T 15-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 Trad_1472 7b7e47116b03a9400fad4dc794cceb8a 256 Gene3D G3DSA:3.20.20.370 1 223 1.4E-53 T 15-10-2018 Trad_0599 2533177667518e4d2f35f609cb399ae5 384 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 68 321 1.2E-17 T 15-10-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain Trad_0599 2533177667518e4d2f35f609cb399ae5 384 Gene3D G3DSA:3.90.245.10 50 300 3.7E-36 T 15-10-2018 IPR036452 Ribonucleoside hydrolase-like Trad_0599 2533177667518e4d2f35f609cb399ae5 384 SUPERFAMILY SSF53590 67 373 3.53E-27 T 15-10-2018 IPR036452 Ribonucleoside hydrolase-like Trad_2519 d324ce0e42853a76656c637c569b3da6 1235 SUPERFAMILY SSF47644 649 736 1.7E-27 T 15-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Trad_2519 d324ce0e42853a76656c637c569b3da6 1235 Gene3D G3DSA:3.40.50.280 742 893 2.1E-53 T 15-10-2018 Trad_2519 d324ce0e42853a76656c637c569b3da6 1235 Pfam PF00809 Pterin binding enzyme 360 598 1.8E-56 T 15-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Trad_2519 d324ce0e42853a76656c637c569b3da6 1235 SUPERFAMILY SSF82282 10 399 9.42E-119 T 15-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 Trad_2519 d324ce0e42853a76656c637c569b3da6 1235 SUPERFAMILY SSF51717 356 630 3.27E-86 T 15-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Trad_2519 d324ce0e42853a76656c637c569b3da6 1235 Gene3D G3DSA:1.10.1240.10 646 734 4.1E-38 T 15-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Trad_2519 d324ce0e42853a76656c637c569b3da6 1235 Pfam PF02310 B12 binding domain 746 835 3.6E-21 T 15-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 Trad_2519 d324ce0e42853a76656c637c569b3da6 1235 Gene3D G3DSA:1.10.288.10 932 1086 2.9E-134 T 15-10-2018 Trad_2519 d324ce0e42853a76656c637c569b3da6 1235 TIGRFAM TIGR02082 metH: methionine synthase 14 1186 0.0 T 15-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Trad_2519 d324ce0e42853a76656c637c569b3da6 1235 Gene3D G3DSA:3.10.196.10 915 1217 2.9E-134 T 15-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Trad_2519 d324ce0e42853a76656c637c569b3da6 1235 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 934 1202 1.6E-118 T 15-10-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Trad_2519 d324ce0e42853a76656c637c569b3da6 1235 Pfam PF02574 Homocysteine S-methyltransferase 19 324 3.6E-80 T 15-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 Trad_2519 d324ce0e42853a76656c637c569b3da6 1235 SUPERFAMILY SSF52242 740 892 1.09E-45 T 15-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 Trad_2519 d324ce0e42853a76656c637c569b3da6 1235 Gene3D G3DSA:3.20.20.330 3 337 1.8E-129 T 15-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 Trad_2519 d324ce0e42853a76656c637c569b3da6 1235 PIRSF PIRSF000381 3 1189 0.0 T 15-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Trad_2519 d324ce0e42853a76656c637c569b3da6 1235 Pfam PF02607 B12 binding domain 656 729 3.7E-24 T 15-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Trad_2519 d324ce0e42853a76656c637c569b3da6 1235 SUPERFAMILY SSF56507 900 1220 2.09E-121 T 15-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Trad_2519 d324ce0e42853a76656c637c569b3da6 1235 SMART SM01018 654 737 7.1E-43 T 15-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Trad_2519 d324ce0e42853a76656c637c569b3da6 1235 Gene3D G3DSA:3.20.20.20 341 642 4.5E-126 T 15-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Trad_2433 54ff5dd8daad5ce78c485f9778a7a082 380 SUPERFAMILY SSF53756 15 374 1.12E-75 T 15-10-2018 Trad_2433 54ff5dd8daad5ce78c485f9778a7a082 380 Pfam PF00534 Glycosyl transferases group 1 199 356 2.6E-40 T 15-10-2018 IPR001296 Glycosyl transferase, family 1 Trad_2433 54ff5dd8daad5ce78c485f9778a7a082 380 Pfam PF13439 Glycosyltransferase Family 4 26 185 5.5E-9 T 15-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Trad_2433 54ff5dd8daad5ce78c485f9778a7a082 380 Gene3D G3DSA:3.40.50.2000 14 188 3.1E-6 T 15-10-2018 Trad_2433 54ff5dd8daad5ce78c485f9778a7a082 380 Gene3D G3DSA:3.40.50.2000 189 360 3.7E-50 T 15-10-2018 Trad_1576 5ae8b798dc02a8cb0549e71f98743c61 351 Pfam PF07478 D-ala D-ala ligase C-terminus 144 344 4.7E-69 T 15-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Trad_1576 5ae8b798dc02a8cb0549e71f98743c61 351 Gene3D G3DSA:3.40.50.20 11 123 4.9E-25 T 15-10-2018 Trad_1576 5ae8b798dc02a8cb0549e71f98743c61 351 PIRSF PIRSF039102 11 351 2.4E-98 T 15-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Trad_1576 5ae8b798dc02a8cb0549e71f98743c61 351 Gene3D G3DSA:3.30.470.20 125 349 3.3E-76 T 15-10-2018 Trad_1576 5ae8b798dc02a8cb0549e71f98743c61 351 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 13 348 38.201 T 15-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Trad_1576 5ae8b798dc02a8cb0549e71f98743c61 351 Pfam PF01820 D-ala D-ala ligase N-terminus 14 126 1.5E-21 T 15-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Trad_1576 5ae8b798dc02a8cb0549e71f98743c61 351 SUPERFAMILY SSF52440 13 135 5.37E-28 T 15-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Trad_1576 5ae8b798dc02a8cb0549e71f98743c61 351 Gene3D G3DSA:3.30.1490.20 151 222 3.3E-76 T 15-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Trad_1576 5ae8b798dc02a8cb0549e71f98743c61 351 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 291 318 - T 15-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Trad_1576 5ae8b798dc02a8cb0549e71f98743c61 351 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 14 347 2.0E-100 T 15-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Trad_1576 5ae8b798dc02a8cb0549e71f98743c61 351 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 103 114 - T 15-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Trad_1576 5ae8b798dc02a8cb0549e71f98743c61 351 SUPERFAMILY SSF56059 136 348 2.65E-54 T 15-10-2018 Trad_1374 abb09a6624d2ed4229c87f0b905c968b 234 Gene3D G3DSA:3.30.2170.10 4 229 2.1E-60 T 15-10-2018 Trad_1374 abb09a6624d2ed4229c87f0b905c968b 234 Pfam PF04493 Endonuclease V 20 214 2.7E-58 T 15-10-2018 IPR007581 Endonuclease V GO:0004519|GO:0006281 Trad_1374 abb09a6624d2ed4229c87f0b905c968b 234 Hamap MF_00801 Endonuclease V [nfi]. 10 224 31.91 T 15-10-2018 IPR007581 Endonuclease V GO:0004519|GO:0006281 Trad_2260 f34f24500c2a07ba6c9cba99a7f07daa 382 Pfam PF01966 HD domain 76 201 7.5E-20 T 15-10-2018 IPR006674 HD domain Trad_2260 f34f24500c2a07ba6c9cba99a7f07daa 382 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 39 178 1.7E-63 T 15-10-2018 IPR006261 dNTP triphosphohydrolase GO:0016793 Trad_2260 f34f24500c2a07ba6c9cba99a7f07daa 382 Pfam PF13286 Phosphohydrolase-associated domain 289 374 3.0E-23 T 15-10-2018 IPR026875 Phosphohydrolase-associated domain Trad_2260 f34f24500c2a07ba6c9cba99a7f07daa 382 Gene3D G3DSA:1.10.3210.10 1 377 4.4E-143 T 15-10-2018 Trad_2260 f34f24500c2a07ba6c9cba99a7f07daa 382 SUPERFAMILY SSF109604 27 380 7.85E-87 T 15-10-2018 Trad_2260 f34f24500c2a07ba6c9cba99a7f07daa 382 SMART SM00471 72 211 4.1E-14 T 15-10-2018 IPR003607 HD/PDEase domain Trad_2260 f34f24500c2a07ba6c9cba99a7f07daa 382 TIGRFAM TIGR00277 HDIG: HDIG domain 77 114 2.8E-7 T 15-10-2018 IPR006675 HDIG domain Trad_2260 f34f24500c2a07ba6c9cba99a7f07daa 382 Hamap MF_01212 Deoxyguanosinetriphosphate triphosphohydrolase-like protein. 16 376 38.772 T 15-10-2018 IPR023023 dNTP triphosphohydrolase, type 2 GO:0016793 Trad_2558 63d8649ffe83b1ffec740c89b96a2978 209 SUPERFAMILY SSF51126 61 200 3.62E-9 T 15-10-2018 IPR011050 Pectin lyase fold/virulence factor Trad_2558 63d8649ffe83b1ffec740c89b96a2978 209 Gene3D G3DSA:2.160.20.20 49 204 2.0E-7 T 15-10-2018 IPR012332 P22 tailspike-like, C-terminal domain superfamily Trad_2249 435737899b8f21431db64ea6e86317c1 409 Pfam PF04551 GcpE protein 10 395 3.5E-113 T 15-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 Trad_2249 435737899b8f21431db64ea6e86317c1 409 PIRSF PIRSF004640 1 405 8.0E-130 T 15-10-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 Trad_2249 435737899b8f21431db64ea6e86317c1 409 Gene3D G3DSA:3.20.20.20 2 288 2.0E-100 T 15-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Trad_2249 435737899b8f21431db64ea6e86317c1 409 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 3 399 31.35 T 15-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 Trad_2249 435737899b8f21431db64ea6e86317c1 409 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 5 394 5.6E-120 T 15-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 Trad_2249 435737899b8f21431db64ea6e86317c1 409 SUPERFAMILY SSF56014 293 401 3.47E-8 T 15-10-2018 Trad_2249 435737899b8f21431db64ea6e86317c1 409 Gene3D G3DSA:3.30.413.10 289 406 1.5E-37 T 15-10-2018 Trad_2981 cb29d5a129532d667347ab5e0ecff3aa 824 SUPERFAMILY SSF54862 97 229 9.21E-35 T 15-10-2018 Trad_2981 cb29d5a129532d667347ab5e0ecff3aa 824 SUPERFAMILY SSF50692 722 775 3.39E-5 T 15-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily Trad_2981 cb29d5a129532d667347ab5e0ecff3aa 824 SMART SM00929 104 144 5.1E-18 T 15-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Trad_2981 cb29d5a129532d667347ab5e0ecff3aa 824 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 2 95 3.9E-6 T 15-10-2018 Trad_2981 cb29d5a129532d667347ab5e0ecff3aa 824 SUPERFAMILY SSF54292 2 95 5.07E-16 T 15-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Trad_2981 cb29d5a129532d667347ab5e0ecff3aa 824 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 106 138 8.8E-16 T 15-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Trad_2981 cb29d5a129532d667347ab5e0ecff3aa 824 ProSitePatterns PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 119 131 - T 15-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Trad_2981 cb29d5a129532d667347ab5e0ecff3aa 824 Gene3D G3DSA:3.30.70.20 147 224 5.3E-9 T 15-10-2018 Trad_2981 cb29d5a129532d667347ab5e0ecff3aa 824 SUPERFAMILY SSF53706 234 672 5.05E-69 T 15-10-2018 Trad_2981 cb29d5a129532d667347ab5e0ecff3aa 824 Pfam PF00384 Molybdopterin oxidoreductase 565 618 4.4E-7 T 15-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Trad_2981 cb29d5a129532d667347ab5e0ecff3aa 824 Pfam PF00384 Molybdopterin oxidoreductase 293 403 1.4E-7 T 15-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Trad_2981 cb29d5a129532d667347ab5e0ecff3aa 824 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 30 47 - T 15-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Trad_2981 cb29d5a129532d667347ab5e0ecff3aa 824 Gene3D G3DSA:3.40.50.740 228 385 2.8E-7 T 15-10-2018 Trad_2981 cb29d5a129532d667347ab5e0ecff3aa 824 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 167 177 - T 15-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Trad_2981 cb29d5a129532d667347ab5e0ecff3aa 824 Gene3D G3DSA:3.40.50.740 499 675 3.3E-18 T 15-10-2018 Trad_2981 cb29d5a129532d667347ab5e0ecff3aa 824 Gene3D G3DSA:3.10.20.740 1 144 1.1E-24 T 15-10-2018 Trad_2981 cb29d5a129532d667347ab5e0ecff3aa 824 TIGRFAM TIGR01973 NuoG: NADH dehydrogenase (quinone), G subunit 3 619 2.7E-145 T 15-10-2018 IPR010228 NADH:ubiquinone oxidoreductase, subunit G GO:0016651|GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Trad_1717 75ec0107721b6703fded26ff3e43739a 269 Gene3D G3DSA:3.40.50.150 12 217 7.9E-35 T 15-10-2018 Trad_1717 75ec0107721b6703fded26ff3e43739a 269 Pfam PF08241 Methyltransferase domain 53 150 1.5E-21 T 15-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 Trad_1717 75ec0107721b6703fded26ff3e43739a 269 SUPERFAMILY SSF53335 20 257 4.18E-39 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Trad_2262 f37bf4d39244779a4764647ad2121468 497 SMART SM00220 18 228 0.0069 T 15-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Trad_2262 f37bf4d39244779a4764647ad2121468 497 SUPERFAMILY SSF56112 100 229 9.13E-12 T 15-10-2018 IPR011009 Protein kinase-like domain superfamily Trad_2262 f37bf4d39244779a4764647ad2121468 497 Gene3D G3DSA:1.10.510.10 92 229 8.8E-10 T 15-10-2018 Trad_2986 8aaa343bdd837179516a4441e35b3d6c 216 ProSitePatterns PS00542 Respiratory chain NADH dehydrogenase 30 Kd subunit signature. 110 131 - T 15-10-2018 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Trad_2986 8aaa343bdd837179516a4441e35b3d6c 216 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 28 149 3.7E-41 T 15-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Trad_2986 8aaa343bdd837179516a4441e35b3d6c 216 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 83 132 3.0E-15 T 15-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Trad_2986 8aaa343bdd837179516a4441e35b3d6c 216 SUPERFAMILY SSF143243 22 165 8.89E-51 T 15-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Trad_2986 8aaa343bdd837179516a4441e35b3d6c 216 Hamap MF_01357 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic [ndhJ]. 3 157 28.292 T 15-10-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Trad_2986 8aaa343bdd837179516a4441e35b3d6c 216 Gene3D G3DSA:3.30.460.80 3 129 3.8E-41 T 15-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Trad_2986 8aaa343bdd837179516a4441e35b3d6c 216 TIGRFAM TIGR01961 NuoC_fam: NADH (or F420H2) dehydrogenase, subunit C 28 148 5.2E-39 T 15-10-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Trad_2194 3e4dd224156a801e25ea84c11df0796f 387 SUPERFAMILY SSF53448 5 320 4.69E-66 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Trad_2194 3e4dd224156a801e25ea84c11df0796f 387 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 12 31 - T 15-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 Trad_2194 3e4dd224156a801e25ea84c11df0796f 387 Gene3D G3DSA:2.160.10.10 272 377 6.2E-16 T 15-10-2018 Trad_2194 3e4dd224156a801e25ea84c11df0796f 387 Pfam PF00483 Nucleotidyl transferase 8 258 2.1E-48 T 15-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Trad_2194 3e4dd224156a801e25ea84c11df0796f 387 Gene3D G3DSA:3.90.550.10 2 271 2.2E-72 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Trad_2194 3e4dd224156a801e25ea84c11df0796f 387 SUPERFAMILY SSF51161 227 383 2.85E-12 T 15-10-2018 IPR011004 Trimeric LpxA-like superfamily Trad_0700 6ca14b454023cecaa0dd7f41d9dbdb60 242 SUPERFAMILY SSF52317 2 220 1.53E-62 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like Trad_0700 6ca14b454023cecaa0dd7f41d9dbdb60 242 Gene3D G3DSA:3.40.50.880 1 242 5.8E-111 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like Trad_0700 6ca14b454023cecaa0dd7f41d9dbdb60 242 PIRSF PIRSF030013 1 240 4.2E-117 T 15-10-2018 IPR009381 Trehalose catabolism protein, ThuA, prokaryote Trad_0700 6ca14b454023cecaa0dd7f41d9dbdb60 242 Pfam PF06283 Trehalose utilisation 2 217 1.1E-32 T 15-10-2018 IPR029010 ThuA-like domain Trad_0050 ccd13fdb8669d921e653879907410812 356 SUPERFAMILY SSF53850 32 351 9.97E-83 T 15-10-2018 Trad_0050 ccd13fdb8669d921e653879907410812 356 Gene3D G3DSA:3.40.190.10 137 347 8.8E-104 T 15-10-2018 Trad_0050 ccd13fdb8669d921e653879907410812 356 Gene3D G3DSA:3.40.190.10 35 323 8.8E-104 T 15-10-2018 Trad_0050 ccd13fdb8669d921e653879907410812 356 PIRSF PIRSF019574 1 353 2.1E-102 T 15-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 Trad_0050 ccd13fdb8669d921e653879907410812 356 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 206 225 4.3E-40 T 15-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 Trad_0050 ccd13fdb8669d921e653879907410812 356 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 54 75 4.3E-40 T 15-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 Trad_0050 ccd13fdb8669d921e653879907410812 356 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 128 144 4.3E-40 T 15-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 Trad_0050 ccd13fdb8669d921e653879907410812 356 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 252 271 4.3E-40 T 15-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 Trad_0050 ccd13fdb8669d921e653879907410812 356 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 97 110 4.3E-40 T 15-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 Trad_0050 ccd13fdb8669d921e653879907410812 356 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 38 54 4.3E-40 T 15-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 Trad_0050 ccd13fdb8669d921e653879907410812 356 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 169 188 4.3E-40 T 15-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 Trad_0050 ccd13fdb8669d921e653879907410812 356 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 299 325 4.3E-40 T 15-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 Trad_0050 ccd13fdb8669d921e653879907410812 356 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 81 95 4.3E-40 T 15-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 Trad_0050 ccd13fdb8669d921e653879907410812 356 Pfam PF13416 Bacterial extracellular solute-binding protein 49 306 4.1E-29 T 15-10-2018 IPR006059 Bacterial extracellular solute-binding protein Trad_2816 0ab1fdcb862c47f333e71987fac2ec67 191 SUPERFAMILY SSF52317 2 190 1.36E-56 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like Trad_2816 0ab1fdcb862c47f333e71987fac2ec67 191 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 46 60 6.8E-8 T 15-10-2018 Trad_2816 0ab1fdcb862c47f333e71987fac2ec67 191 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 76 92 6.8E-8 T 15-10-2018 Trad_2816 0ab1fdcb862c47f333e71987fac2ec67 191 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 4 190 1.5E-71 T 15-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Trad_2816 0ab1fdcb862c47f333e71987fac2ec67 191 Pfam PF00117 Glutamine amidotransferase class-I 5 189 1.1E-52 T 15-10-2018 IPR017926 Glutamine amidotransferase Trad_2816 0ab1fdcb862c47f333e71987fac2ec67 191 PRINTS PR00097 Anthranilate synthase component II signature 4 18 2.2E-36 T 15-10-2018 Trad_2816 0ab1fdcb862c47f333e71987fac2ec67 191 PRINTS PR00097 Anthranilate synthase component II signature 76 87 2.2E-36 T 15-10-2018 Trad_2816 0ab1fdcb862c47f333e71987fac2ec67 191 PRINTS PR00097 Anthranilate synthase component II signature 167 180 2.2E-36 T 15-10-2018 Trad_2816 0ab1fdcb862c47f333e71987fac2ec67 191 PRINTS PR00097 Anthranilate synthase component II signature 49 58 2.2E-36 T 15-10-2018 Trad_2816 0ab1fdcb862c47f333e71987fac2ec67 191 PRINTS PR00097 Anthranilate synthase component II signature 101 109 2.2E-36 T 15-10-2018 Trad_2816 0ab1fdcb862c47f333e71987fac2ec67 191 PRINTS PR00097 Anthranilate synthase component II signature 121 133 2.2E-36 T 15-10-2018 Trad_2816 0ab1fdcb862c47f333e71987fac2ec67 191 PRINTS PR00096 Glutamine amidotransferase superfamily signature 76 87 2.1E-13 T 15-10-2018 Trad_2816 0ab1fdcb862c47f333e71987fac2ec67 191 PRINTS PR00096 Glutamine amidotransferase superfamily signature 167 180 2.1E-13 T 15-10-2018 Trad_2816 0ab1fdcb862c47f333e71987fac2ec67 191 PRINTS PR00096 Glutamine amidotransferase superfamily signature 49 58 2.1E-13 T 15-10-2018 Trad_2816 0ab1fdcb862c47f333e71987fac2ec67 191 Gene3D G3DSA:3.40.50.880 1 190 2.9E-65 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like Trad_1773 369dfcc08c06c07de2fc3b41b610f13f 268 Gene3D G3DSA:3.30.1240.10 83 189 3.7E-47 T 15-10-2018 Trad_1773 369dfcc08c06c07de2fc3b41b610f13f 268 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 244 5.8E-32 T 15-10-2018 Trad_1773 369dfcc08c06c07de2fc3b41b610f13f 268 Gene3D G3DSA:3.40.50.1000 4 258 3.7E-47 T 15-10-2018 IPR023214 HAD superfamily Trad_1773 369dfcc08c06c07de2fc3b41b610f13f 268 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 4 233 2.5E-18 T 15-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 Trad_1773 369dfcc08c06c07de2fc3b41b610f13f 268 SUPERFAMILY SSF56784 3 263 7.38E-44 T 15-10-2018 IPR036412 HAD-like superfamily Trad_1463 1356b0ad4f370ce558698b05852b5a37 317 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 55 307 9.7E-97 T 15-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 Trad_1463 1356b0ad4f370ce558698b05852b5a37 317 Pfam PF00809 Pterin binding enzyme 56 293 1.5E-86 T 15-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Trad_1463 1356b0ad4f370ce558698b05852b5a37 317 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 55 70 - T 15-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Trad_1463 1356b0ad4f370ce558698b05852b5a37 317 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 89 102 - T 15-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Trad_1463 1356b0ad4f370ce558698b05852b5a37 317 SUPERFAMILY SSF51717 48 310 4.32E-97 T 15-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Trad_1463 1356b0ad4f370ce558698b05852b5a37 317 Gene3D G3DSA:3.20.20.20 40 314 3.2E-109 T 15-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Trad_1498 d0f7e86a194c966efaff5c7f86324c8d 332 SUPERFAMILY SSF52283 3 135 1.7E-38 T 15-10-2018 Trad_1498 d0f7e86a194c966efaff5c7f86324c8d 332 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 110 294 2.8E-56 T 15-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 Trad_1498 d0f7e86a194c966efaff5c7f86324c8d 332 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 147 174 - T 15-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 Trad_1498 d0f7e86a194c966efaff5c7f86324c8d 332 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 5 325 1.8E-28 T 15-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 Trad_1498 d0f7e86a194c966efaff5c7f86324c8d 332 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 191 213 - T 15-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site Trad_1498 d0f7e86a194c966efaff5c7f86324c8d 332 Gene3D G3DSA:3.40.50.720 5 318 7.4E-137 T 15-10-2018 Trad_1498 d0f7e86a194c966efaff5c7f86324c8d 332 SUPERFAMILY SSF51735 102 295 4.34E-61 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_1498 d0f7e86a194c966efaff5c7f86324c8d 332 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 220 236 - T 15-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site Trad_1498 d0f7e86a194c966efaff5c7f86324c8d 332 Gene3D G3DSA:3.40.50.720 102 294 7.4E-137 T 15-10-2018 Trad_1851 5ff0e39858c664dd00d687b16e490429 420 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 231 418 1.7E-27 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Trad_1851 5ff0e39858c664dd00d687b16e490429 420 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 66 117 1.4E-14 T 15-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain Trad_1851 5ff0e39858c664dd00d687b16e490429 420 Gene3D G3DSA:1.10.3720.10 202 417 2.0E-19 T 15-10-2018 IPR035906 MetI-like superfamily Trad_1851 5ff0e39858c664dd00d687b16e490429 420 SUPERFAMILY SSF161098 208 403 1.96E-20 T 15-10-2018 IPR035906 MetI-like superfamily Trad_1347 d4c0e91ca0f15faa9be232f8bf934039 397 SUPERFAMILY SSF69705 1 125 8.24E-39 T 15-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 Trad_1347 d4c0e91ca0f15faa9be232f8bf934039 397 SUPERFAMILY SSF54814 201 277 7.85E-28 T 15-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 Trad_1347 d4c0e91ca0f15faa9be232f8bf934039 397 Gene3D G3DSA:2.40.50.140 128 198 9.5E-23 T 15-10-2018 Trad_1347 d4c0e91ca0f15faa9be232f8bf934039 397 SUPERFAMILY SSF54814 280 339 4.19E-14 T 15-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 Trad_1347 d4c0e91ca0f15faa9be232f8bf934039 397 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 5 340 1.4E-126 T 15-10-2018 IPR010213 Transcription termination factor NusA GO:0003723 Trad_1347 d4c0e91ca0f15faa9be232f8bf934039 397 Gene3D G3DSA:3.30.300.20 199 277 2.2E-31 T 15-10-2018 IPR015946 K homology domain-like, alpha/beta Trad_1347 d4c0e91ca0f15faa9be232f8bf934039 397 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 397 28.614 T 15-10-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 Trad_1347 d4c0e91ca0f15faa9be232f8bf934039 397 SMART SM00316 133 200 6.0E-5 T 15-10-2018 IPR022967 RNA-binding domain, S1 Trad_1347 d4c0e91ca0f15faa9be232f8bf934039 397 Gene3D G3DSA:3.30.300.20 279 394 4.4E-28 T 15-10-2018 IPR015946 K homology domain-like, alpha/beta Trad_1347 d4c0e91ca0f15faa9be232f8bf934039 397 Pfam PF13184 NusA-like KH domain 230 297 9.4E-26 T 15-10-2018 IPR025249 KH domain, NusA-like GO:0003723 Trad_1347 d4c0e91ca0f15faa9be232f8bf934039 397 Pfam PF08529 NusA N-terminal domain 4 123 1.4E-37 T 15-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 Trad_1347 d4c0e91ca0f15faa9be232f8bf934039 397 SUPERFAMILY SSF50249 131 199 2.57E-16 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold Trad_1347 d4c0e91ca0f15faa9be232f8bf934039 397 Pfam PF00575 S1 RNA binding domain 131 195 2.3E-4 T 15-10-2018 IPR003029 S1 domain GO:0003676 Trad_1347 d4c0e91ca0f15faa9be232f8bf934039 397 Gene3D G3DSA:3.30.1480.10 1 124 1.2E-42 T 15-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 Trad_2752 2aba173ef4de629e876b0bdd1643f4a7 954 Gene3D G3DSA:1.20.1580.10 695 832 1.4E-143 T 15-10-2018 Trad_2752 2aba173ef4de629e876b0bdd1643f4a7 954 SUPERFAMILY SSF52540 2 573 4.59E-48 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_2752 2aba173ef4de629e876b0bdd1643f4a7 954 ProSitePatterns PS00211 ABC transporters family signature. 491 505 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Trad_2752 2aba173ef4de629e876b0bdd1643f4a7 954 SMART SM00382 635 908 5.1E-4 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_2752 2aba173ef4de629e876b0bdd1643f4a7 954 SMART SM00382 23 568 7.6 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_2752 2aba173ef4de629e876b0bdd1643f4a7 954 ProSitePatterns PS00211 ABC transporters family signature. 832 846 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Trad_2752 2aba173ef4de629e876b0bdd1643f4a7 954 Hamap MF_00205 UvrABC system protein A [uvrA]. 1 942 22.85 T 15-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 Trad_2752 2aba173ef4de629e876b0bdd1643f4a7 954 Gene3D G3DSA:1.20.1580.10 90 496 1.9E-248 T 15-10-2018 Trad_2752 2aba173ef4de629e876b0bdd1643f4a7 954 Gene3D G3DSA:3.30.190.20 130 244 1.9E-248 T 15-10-2018 Trad_2752 2aba173ef4de629e876b0bdd1643f4a7 954 Gene3D G3DSA:3.40.50.300 616 938 1.4E-143 T 15-10-2018 Trad_2752 2aba173ef4de629e876b0bdd1643f4a7 954 SUPERFAMILY SSF52540 617 915 5.32E-50 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_2752 2aba173ef4de629e876b0bdd1643f4a7 954 Pfam PF00005 ABC transporter 626 862 3.6E-10 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Trad_2752 2aba173ef4de629e876b0bdd1643f4a7 954 Gene3D G3DSA:3.40.50.300 6 598 1.9E-248 T 15-10-2018 Trad_2752 2aba173ef4de629e876b0bdd1643f4a7 954 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 4 927 0.0 T 15-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 Trad_2752 2aba173ef4de629e876b0bdd1643f4a7 954 Gene3D G3DSA:1.10.8.280 287 407 1.9E-248 T 15-10-2018 Trad_2409 03c5419075b43a9cedd1cf506c3d9836 672 Gene3D G3DSA:3.40.228.10 136 351 2.1E-123 T 15-10-2018 Trad_2409 03c5419075b43a9cedd1cf506c3d9836 672 Pfam PF01568 Molydopterin dinucleotide binding domain 552 661 3.6E-17 T 15-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 Trad_2409 03c5419075b43a9cedd1cf506c3d9836 672 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 4 53 6.5E-11 T 15-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Trad_2409 03c5419075b43a9cedd1cf506c3d9836 672 SMART SM00926 1 56 1.5E-14 T 15-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Trad_2409 03c5419075b43a9cedd1cf506c3d9836 672 SUPERFAMILY SSF53706 4 535 3.27E-145 T 15-10-2018 Trad_2409 03c5419075b43a9cedd1cf506c3d9836 672 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 412 429 - T 15-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 Trad_2409 03c5419075b43a9cedd1cf506c3d9836 672 Gene3D G3DSA:2.20.25.90 2 61 6.6E-9 T 15-10-2018 Trad_2409 03c5419075b43a9cedd1cf506c3d9836 672 Gene3D G3DSA:3.40.50.740 70 472 2.1E-123 T 15-10-2018 Trad_2409 03c5419075b43a9cedd1cf506c3d9836 672 SUPERFAMILY SSF50692 543 669 4.75E-30 T 15-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily Trad_2409 03c5419075b43a9cedd1cf506c3d9836 672 Gene3D G3DSA:3.30.2070.10 427 511 2.1E-123 T 15-10-2018 Trad_2409 03c5419075b43a9cedd1cf506c3d9836 672 Gene3D G3DSA:2.40.40.20 533 672 9.8E-23 T 15-10-2018 Trad_2409 03c5419075b43a9cedd1cf506c3d9836 672 Pfam PF00384 Molybdopterin oxidoreductase 59 467 2.0E-58 T 15-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Trad_2125 f0971073400641fb914895f95323d204 84 PIRSF PIRSF002599 1 82 2.0E-27 T 15-10-2018 IPR012156 Cold shock, CspA GO:0003676 Trad_2125 f0971073400641fb914895f95323d204 84 SUPERFAMILY SSF50249 1 67 1.31E-24 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold Trad_2125 f0971073400641fb914895f95323d204 84 PRINTS PR00050 Cold shock protein signature 40 58 5.4E-17 T 15-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Trad_2125 f0971073400641fb914895f95323d204 84 PRINTS PR00050 Cold shock protein signature 25 34 5.4E-17 T 15-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Trad_2125 f0971073400641fb914895f95323d204 84 PRINTS PR00050 Cold shock protein signature 4 19 5.4E-17 T 15-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Trad_2125 f0971073400641fb914895f95323d204 84 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 15-10-2018 IPR019844 Cold-shock conserved site Trad_2125 f0971073400641fb914895f95323d204 84 Pfam PF00313 'Cold-shock' DNA-binding domain 3 66 2.0E-29 T 15-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Trad_2125 f0971073400641fb914895f95323d204 84 SMART SM00357 3 67 2.2E-29 T 15-10-2018 IPR011129 Cold shock domain GO:0003676 Trad_2125 f0971073400641fb914895f95323d204 84 Gene3D G3DSA:2.40.50.140 1 72 5.1E-29 T 15-10-2018 Trad_0627 7961e5f8c58a40ef4a3beb81a02df9ec 258 SMART SM00382 27 201 2.3E-13 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_0627 7961e5f8c58a40ef4a3beb81a02df9ec 258 SUPERFAMILY SSF52540 1 226 3.96E-61 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_0627 7961e5f8c58a40ef4a3beb81a02df9ec 258 Pfam PF00005 ABC transporter 19 153 1.0E-26 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Trad_0627 7961e5f8c58a40ef4a3beb81a02df9ec 258 Gene3D G3DSA:3.40.50.300 1 214 9.5E-59 T 15-10-2018 Trad_0627 7961e5f8c58a40ef4a3beb81a02df9ec 258 ProSitePatterns PS00211 ABC transporters family signature. 125 139 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Trad_0176 df05168db5614aa8f205549d20895c50 862 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 9 852 0.0 T 15-10-2018 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0042026 Trad_0176 df05168db5614aa8f205549d20895c50 862 SUPERFAMILY SSF81923 7 153 2.62E-29 T 15-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 Trad_0176 df05168db5614aa8f205549d20895c50 862 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 292 304 - T 15-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 Trad_0176 df05168db5614aa8f205549d20895c50 862 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 627 645 - T 15-10-2018 IPR028299 ClpA/B, conserved site 2 Trad_0176 df05168db5614aa8f205549d20895c50 862 Gene3D G3DSA:3.40.50.300 147 339 8.6E-72 T 15-10-2018 Trad_0176 df05168db5614aa8f205549d20895c50 862 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 201 331 4.7E-12 T 15-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Trad_0176 df05168db5614aa8f205549d20895c50 862 Gene3D G3DSA:3.40.50.300 340 540 5.7E-72 T 15-10-2018 Trad_0176 df05168db5614aa8f205549d20895c50 862 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 642 660 4.6E-42 T 15-10-2018 IPR001270 ClpA/B family GO:0005524 Trad_0176 df05168db5614aa8f205549d20895c50 862 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 597 615 4.6E-42 T 15-10-2018 IPR001270 ClpA/B family GO:0005524 Trad_0176 df05168db5614aa8f205549d20895c50 862 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 704 718 4.6E-42 T 15-10-2018 IPR001270 ClpA/B family GO:0005524 Trad_0176 df05168db5614aa8f205549d20895c50 862 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 671 689 4.6E-42 T 15-10-2018 IPR001270 ClpA/B family GO:0005524 Trad_0176 df05168db5614aa8f205549d20895c50 862 SUPERFAMILY SSF52540 155 540 2.37E-97 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_0176 df05168db5614aa8f205549d20895c50 862 SMART SM01086 763 852 2.5E-34 T 15-10-2018 IPR019489 Clp ATPase, C-terminal Trad_0176 df05168db5614aa8f205549d20895c50 862 SUPERFAMILY SSF52540 542 843 4.38E-84 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_0176 df05168db5614aa8f205549d20895c50 862 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 96 128 2.1 T 15-10-2018 IPR004176 Clp, N-terminal Trad_0176 df05168db5614aa8f205549d20895c50 862 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 21 69 4.7E-12 T 15-10-2018 IPR004176 Clp, N-terminal Trad_0176 df05168db5614aa8f205549d20895c50 862 Pfam PF07724 AAA domain (Cdc48 subfamily) 592 756 4.8E-53 T 15-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Trad_0176 df05168db5614aa8f205549d20895c50 862 SMART SM00382 196 340 1.8E-9 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_0176 df05168db5614aa8f205549d20895c50 862 SMART SM00382 593 739 2.1E-11 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_0176 df05168db5614aa8f205549d20895c50 862 Gene3D G3DSA:1.10.8.60 763 860 3.1E-26 T 15-10-2018 Trad_0176 df05168db5614aa8f205549d20895c50 862 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 763 842 7.7E-25 T 15-10-2018 IPR019489 Clp ATPase, C-terminal Trad_0176 df05168db5614aa8f205549d20895c50 862 Gene3D G3DSA:3.40.50.300 546 761 2.0E-87 T 15-10-2018 Trad_0176 df05168db5614aa8f205549d20895c50 862 Gene3D G3DSA:1.10.1780.10 4 146 1.0E-28 T 15-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 Trad_1496 53fae2b1ac4006a113043879e80ab788 559 PRINTS PR01165 Cytochrome c oxidase subunit I signature 423 444 1.2E-9 T 15-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Trad_1496 53fae2b1ac4006a113043879e80ab788 559 PRINTS PR01165 Cytochrome c oxidase subunit I signature 125 137 1.2E-9 T 15-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Trad_1496 53fae2b1ac4006a113043879e80ab788 559 PRINTS PR01165 Cytochrome c oxidase subunit I signature 223 244 1.2E-9 T 15-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Trad_1496 53fae2b1ac4006a113043879e80ab788 559 PRINTS PR01165 Cytochrome c oxidase subunit I signature 294 315 1.2E-9 T 15-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Trad_1496 53fae2b1ac4006a113043879e80ab788 559 SUPERFAMILY SSF81442 16 549 1.7E-104 T 15-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Trad_1496 53fae2b1ac4006a113043879e80ab788 559 Gene3D G3DSA:1.20.210.10 4 559 1.7E-141 T 15-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Trad_1496 53fae2b1ac4006a113043879e80ab788 559 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 19 446 1.4E-86 T 15-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Trad_1496 53fae2b1ac4006a113043879e80ab788 559 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 225 279 - T 15-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Trad_0292 18f3ebd2f41b26a33f7b38feb2242b45 355 SUPERFAMILY SSF51735 21 349 9.3E-94 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_0292 18f3ebd2f41b26a33f7b38feb2242b45 355 PRINTS PR01713 Nucleotide sugar epimerase signature 51 67 2.1E-7 T 15-10-2018 Trad_0292 18f3ebd2f41b26a33f7b38feb2242b45 355 PRINTS PR01713 Nucleotide sugar epimerase signature 312 329 2.1E-7 T 15-10-2018 Trad_0292 18f3ebd2f41b26a33f7b38feb2242b45 355 PRINTS PR01713 Nucleotide sugar epimerase signature 240 255 2.1E-7 T 15-10-2018 Trad_0292 18f3ebd2f41b26a33f7b38feb2242b45 355 PRINTS PR01713 Nucleotide sugar epimerase signature 265 280 2.1E-7 T 15-10-2018 Trad_0292 18f3ebd2f41b26a33f7b38feb2242b45 355 Pfam PF16363 GDP-mannose 4,6 dehydratase 26 342 2.2E-58 T 15-10-2018 IPR016040 NAD(P)-binding domain Trad_0292 18f3ebd2f41b26a33f7b38feb2242b45 355 Gene3D G3DSA:3.40.50.720 26 333 2.5E-111 T 15-10-2018 Trad_0292 18f3ebd2f41b26a33f7b38feb2242b45 355 Gene3D G3DSA:3.90.25.10 200 345 2.5E-111 T 15-10-2018 Trad_0647 d6b99ecf27bcebfec12f9b34b787a097 109 Pfam PF06153 Cyclic-di-AMP receptor 1 108 1.1E-40 T 15-10-2018 IPR010375 Cyclic-di-AMP receptor Trad_0647 d6b99ecf27bcebfec12f9b34b787a097 109 SUPERFAMILY SSF54913 2 108 5.93E-12 T 15-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta Trad_0647 d6b99ecf27bcebfec12f9b34b787a097 109 Gene3D G3DSA:3.30.70.120 1 103 1.4E-36 T 15-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal Trad_1837 944328e330a11f0eb7d3600ea74736dc 377 Pfam PF13378 Enolase C-terminal domain-like 156 363 2.1E-28 T 15-10-2018 IPR029065 Enolase C-terminal domain-like Trad_1837 944328e330a11f0eb7d3600ea74736dc 377 SUPERFAMILY SSF54826 29 134 2.86E-23 T 15-10-2018 Trad_1837 944328e330a11f0eb7d3600ea74736dc 377 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 31 133 1.3E-14 T 15-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain Trad_1837 944328e330a11f0eb7d3600ea74736dc 377 SMART SM00922 151 248 1.5E-8 T 15-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal Trad_1837 944328e330a11f0eb7d3600ea74736dc 377 Gene3D G3DSA:3.30.390.10 4 125 1.2E-78 T 15-10-2018 IPR029017 Enolase-like, N-terminal Trad_1837 944328e330a11f0eb7d3600ea74736dc 377 SUPERFAMILY SSF51604 121 367 5.58E-41 T 15-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Trad_1837 944328e330a11f0eb7d3600ea74736dc 377 Gene3D G3DSA:3.20.20.120 126 363 1.2E-78 T 15-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Trad_0201 e7872f2e5170e04b526b0e8c32ac292c 421 Pfam PF01029 NusB family 1 121 6.8E-20 T 15-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 Trad_0201 e7872f2e5170e04b526b0e8c32ac292c 421 Gene3D G3DSA:3.40.50.150 131 410 4.2E-50 T 15-10-2018 Trad_0201 e7872f2e5170e04b526b0e8c32ac292c 421 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 234 244 1.5E-14 T 15-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase Trad_0201 e7872f2e5170e04b526b0e8c32ac292c 421 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 345 361 1.5E-14 T 15-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase Trad_0201 e7872f2e5170e04b526b0e8c32ac292c 421 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 393 410 1.5E-14 T 15-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase Trad_0201 e7872f2e5170e04b526b0e8c32ac292c 421 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 295 307 1.5E-14 T 15-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase Trad_0201 e7872f2e5170e04b526b0e8c32ac292c 421 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 205 219 1.5E-14 T 15-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase Trad_0201 e7872f2e5170e04b526b0e8c32ac292c 421 Gene3D G3DSA:1.10.940.10 1 130 3.6E-28 T 15-10-2018 IPR035926 NusB-like superfamily Trad_0201 e7872f2e5170e04b526b0e8c32ac292c 421 SUPERFAMILY SSF48013 1 137 2.88E-26 T 15-10-2018 IPR035926 NusB-like superfamily Trad_0201 e7872f2e5170e04b526b0e8c32ac292c 421 Pfam PF01189 16S rRNA methyltransferase RsmB/F 224 409 1.3E-32 T 15-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 Trad_0201 e7872f2e5170e04b526b0e8c32ac292c 421 SUPERFAMILY SSF53335 124 410 2.81E-51 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Trad_2724 763023cc126d76d9733a99c8add48c37 285 SUPERFAMILY SSF52540 1 283 9.69E-60 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_2724 763023cc126d76d9733a99c8add48c37 285 Pfam PF00685 Sulfotransferase domain 4 195 2.6E-10 T 15-10-2018 IPR000863 Sulfotransferase domain GO:0008146 Trad_1111 b646cc09c3e2ab01da9156983e67d49f 209 SUPERFAMILY SSF53271 28 190 1.97E-23 T 15-10-2018 IPR029057 Phosphoribosyltransferase-like Trad_1111 b646cc09c3e2ab01da9156983e67d49f 209 Gene3D G3DSA:3.40.50.2020 47 207 7.5E-17 T 15-10-2018 Trad_2733 e94598989f6ded173304d4b6bc4a7986 665 SMART SM00382 195 334 3.0E-24 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_2733 e94598989f6ded173304d4b6bc4a7986 665 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 3 625 33.679 T 15-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 Trad_2733 e94598989f6ded173304d4b6bc4a7986 665 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 199 331 7.8E-45 T 15-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Trad_2733 e94598989f6ded173304d4b6bc4a7986 665 Gene3D G3DSA:1.20.58.760 415 636 3.0E-54 T 15-10-2018 Trad_2733 e94598989f6ded173304d4b6bc4a7986 665 Gene3D G3DSA:3.40.50.300 149 331 4.4E-69 T 15-10-2018 Trad_2733 e94598989f6ded173304d4b6bc4a7986 665 Pfam PF06480 FtsH Extracellular 7 102 1.8E-9 T 15-10-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 Trad_2733 e94598989f6ded173304d4b6bc4a7986 665 SUPERFAMILY SSF52540 157 403 3.76E-74 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_2733 e94598989f6ded173304d4b6bc4a7986 665 SUPERFAMILY SSF140990 413 602 1.23E-50 T 15-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 Trad_2733 e94598989f6ded173304d4b6bc4a7986 665 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 111 594 3.1E-198 T 15-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 Trad_2733 e94598989f6ded173304d4b6bc4a7986 665 Pfam PF01434 Peptidase family M41 394 594 2.0E-55 T 15-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 Trad_2733 e94598989f6ded173304d4b6bc4a7986 665 ProSitePatterns PS00674 AAA-protein family signature. 302 320 - T 15-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 Trad_2733 e94598989f6ded173304d4b6bc4a7986 665 Gene3D G3DSA:1.10.8.60 333 410 4.1E-26 T 15-10-2018 Trad_0170 4ea18282770998affd65db31bed4d32a 399 TIGRFAM TIGR01766 tspaseT_teng_C: transposase, IS605 OrfB family 246 319 1.1E-7 T 15-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal Trad_0170 4ea18282770998affd65db31bed4d32a 399 Pfam PF07282 Putative transposase DNA-binding domain 292 358 3.6E-24 T 15-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal Trad_0170 4ea18282770998affd65db31bed4d32a 399 Pfam PF01385 Probable transposase 166 278 2.6E-23 T 15-10-2018 IPR001959 Probable transposase, IS891/IS1136/IS1341 Trad_2220 4ea18282770998affd65db31bed4d32a 399 TIGRFAM TIGR01766 tspaseT_teng_C: transposase, IS605 OrfB family 246 319 1.1E-7 T 15-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal Trad_2220 4ea18282770998affd65db31bed4d32a 399 Pfam PF07282 Putative transposase DNA-binding domain 292 358 3.6E-24 T 15-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal Trad_2220 4ea18282770998affd65db31bed4d32a 399 Pfam PF01385 Probable transposase 166 278 2.6E-23 T 15-10-2018 IPR001959 Probable transposase, IS891/IS1136/IS1341 Trad_0218 b8947aea8f85ad459deff7536985b19a 365 TIGRFAM TIGR00109 hemH: ferrochelatase 1 317 1.1E-102 T 15-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 Trad_0218 b8947aea8f85ad459deff7536985b19a 365 Pfam PF00762 Ferrochelatase 1 316 2.0E-107 T 15-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 Trad_0218 b8947aea8f85ad459deff7536985b19a 365 Hamap MF_00323 Ferrochelatase [hemH]. 1 316 31.281 T 15-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 Trad_0218 b8947aea8f85ad459deff7536985b19a 365 SUPERFAMILY SSF53800 1 346 4.09E-109 T 15-10-2018 Trad_0218 b8947aea8f85ad459deff7536985b19a 365 Gene3D G3DSA:3.40.50.1400 1 318 3.0E-135 T 15-10-2018 Trad_0218 b8947aea8f85ad459deff7536985b19a 365 Gene3D G3DSA:3.40.50.1400 156 297 3.0E-135 T 15-10-2018 Trad_0218 b8947aea8f85ad459deff7536985b19a 365 ProSitePatterns PS00534 Ferrochelatase signature. 186 206 - T 15-10-2018 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 Trad_1133 7697cd24b74cc3551d9d75a9ffef1565 149 Pfam PF07681 DoxX 21 103 5.0E-21 T 15-10-2018 IPR032808 DoxX family Trad_0779 77974ed17a7de19005724af33dc89260 72 ProSitePatterns PS01143 Ribosomal protein L31 signature. 34 55 - T 15-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Trad_0779 77974ed17a7de19005724af33dc89260 72 Gene3D G3DSA:2.30.170.50 1 68 2.5E-26 T 15-10-2018 Trad_0779 77974ed17a7de19005724af33dc89260 72 SUPERFAMILY SSF143800 1 64 1.26E-23 T 15-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_0779 77974ed17a7de19005724af33dc89260 72 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 67 27.668 T 15-10-2018 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 Trad_0779 77974ed17a7de19005724af33dc89260 72 Pfam PF01197 Ribosomal protein L31 1 64 5.7E-27 T 15-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Trad_0779 77974ed17a7de19005724af33dc89260 72 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 65 6.1E-26 T 15-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Trad_0779 77974ed17a7de19005724af33dc89260 72 PRINTS PR01249 Ribosomal protein L31 signature 2 19 3.5E-17 T 15-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Trad_0779 77974ed17a7de19005724af33dc89260 72 PRINTS PR01249 Ribosomal protein L31 signature 30 45 3.5E-17 T 15-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Trad_0779 77974ed17a7de19005724af33dc89260 72 PRINTS PR01249 Ribosomal protein L31 signature 45 63 3.5E-17 T 15-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Trad_1290 0cf5c91a3640242d1eded6e55804a181 231 SUPERFAMILY SSF46785 149 228 6.07E-19 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Trad_1290 0cf5c91a3640242d1eded6e55804a181 231 Pfam PF13545 Crp-like helix-turn-helix domain 152 226 1.7E-19 T 15-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Trad_1290 0cf5c91a3640242d1eded6e55804a181 231 SMART SM00419 171 219 6.0E-13 T 15-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Trad_1290 0cf5c91a3640242d1eded6e55804a181 231 Pfam PF00027 Cyclic nucleotide-binding domain 33 120 4.8E-23 T 15-10-2018 IPR000595 Cyclic nucleotide-binding domain Trad_1290 0cf5c91a3640242d1eded6e55804a181 231 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 82 99 - T 15-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site Trad_1290 0cf5c91a3640242d1eded6e55804a181 231 Gene3D G3DSA:2.60.120.10 5 147 1.0E-40 T 15-10-2018 IPR014710 RmlC-like jelly roll fold Trad_1290 0cf5c91a3640242d1eded6e55804a181 231 SUPERFAMILY SSF51206 8 145 1.7E-36 T 15-10-2018 IPR018490 Cyclic nucleotide-binding-like Trad_1290 0cf5c91a3640242d1eded6e55804a181 231 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 193 208 3.9E-8 T 15-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Trad_1290 0cf5c91a3640242d1eded6e55804a181 231 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 177 193 3.9E-8 T 15-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Trad_1290 0cf5c91a3640242d1eded6e55804a181 231 Gene3D G3DSA:1.10.10.10 148 231 1.1E-28 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Trad_1290 0cf5c91a3640242d1eded6e55804a181 231 SMART SM00100 14 135 7.2E-23 T 15-10-2018 IPR000595 Cyclic nucleotide-binding domain Trad_0048 d68bd7f9d24e476310f90d83c15cd9d7 316 SUPERFAMILY SSF48150 127 306 6.8E-20 T 15-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 Trad_0048 d68bd7f9d24e476310f90d83c15cd9d7 316 Gene3D G3DSA:1.10.340.30 135 255 5.6E-18 T 15-10-2018 Trad_0265 56e6fdb9ae655f21686254a89468901d 250 Gene3D G3DSA:3.40.50.300 1 249 1.5E-58 T 15-10-2018 Trad_0265 56e6fdb9ae655f21686254a89468901d 250 SUPERFAMILY SSF52540 3 231 1.03E-43 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_0265 56e6fdb9ae655f21686254a89468901d 250 SMART SM00382 28 223 0.0022 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_0265 56e6fdb9ae655f21686254a89468901d 250 TIGRFAM TIGR01978 sufC: FeS assembly ATPase SufC 4 244 2.1E-103 T 15-10-2018 IPR010230 FeS cluster assembly SUF system, ATPase SufC GO:0005524 Trad_0265 56e6fdb9ae655f21686254a89468901d 250 Pfam PF00005 ABC transporter 19 172 1.9E-21 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Trad_2060 b7415d7094e80b3298e372a821db642a 706 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 10 99 3.4E-16 T 15-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 Trad_2060 b7415d7094e80b3298e372a821db642a 706 Gene3D G3DSA:2.60.40.10 1 142 1.4E-49 T 15-10-2018 IPR013783 Immunoglobulin-like fold Trad_2060 b7415d7094e80b3298e372a821db642a 706 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 6 664 6.3E-302 T 15-10-2018 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 Trad_2060 b7415d7094e80b3298e372a821db642a 706 SUPERFAMILY SSF51445 141 579 1.29E-132 T 15-10-2018 IPR017853 Glycoside hydrolase superfamily Trad_2060 b7415d7094e80b3298e372a821db642a 706 Gene3D G3DSA:3.20.20.80 143 586 1.3E-179 T 15-10-2018 Trad_2060 b7415d7094e80b3298e372a821db642a 706 SUPERFAMILY SSF81296 5 153 6.44E-46 T 15-10-2018 IPR014756 Immunoglobulin E-set Trad_2060 b7415d7094e80b3298e372a821db642a 706 SMART SM00642 139 572 4.3E-9 T 15-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Trad_2060 b7415d7094e80b3298e372a821db642a 706 Pfam PF00128 Alpha amylase, catalytic domain 194 307 1.1E-6 T 15-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Trad_2060 b7415d7094e80b3298e372a821db642a 706 Gene3D G3DSA:2.60.40.1180 594 683 1.0E-7 T 15-10-2018 IPR013780 Glycosyl hydrolase, all-beta Trad_2060 b7415d7094e80b3298e372a821db642a 706 SUPERFAMILY SSF51011 591 693 1.58E-13 T 15-10-2018 Trad_1144 3f0a6800a45368690cc896af0fc98b9d 189 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 28 51 1.5E-5 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Trad_1144 3f0a6800a45368690cc896af0fc98b9d 189 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 7 20 1.5E-5 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Trad_1144 3f0a6800a45368690cc896af0fc98b9d 189 Gene3D G3DSA:1.10.357.10 45 185 8.5E-41 T 15-10-2018 Trad_1144 3f0a6800a45368690cc896af0fc98b9d 189 Pfam PF00440 Bacterial regulatory proteins, tetR family 7 50 3.6E-11 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Trad_1144 3f0a6800a45368690cc896af0fc98b9d 189 SUPERFAMILY SSF46689 2 79 4.77E-15 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Trad_1144 3f0a6800a45368690cc896af0fc98b9d 189 SUPERFAMILY SSF48498 75 185 1.01E-25 T 15-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Trad_1144 3f0a6800a45368690cc896af0fc98b9d 189 Gene3D G3DSA:1.10.10.60 1 42 5.6E-15 T 15-10-2018 Trad_2103 1f9956f2bb3978df658109fcb3ec734f 707 Gene3D G3DSA:2.60.120.260 583 704 5.4E-26 T 15-10-2018 IPR008979 Galactose-binding-like domain superfamily Trad_2103 1f9956f2bb3978df658109fcb3ec734f 707 ProSitePatterns PS00591 Glycosyl hydrolases family 10 (GH10) active site. 362 372 - T 15-10-2018 IPR031158 Glycosyl hydrolases family 10, active site MetaCyc: PWY-6717|MetaCyc: PWY-6784 Trad_2103 1f9956f2bb3978df658109fcb3ec734f 707 Pfam PF03422 Carbohydrate binding module (family 6) 461 576 1.1E-14 T 15-10-2018 IPR005084 Carbohydrate binding module family 6 GO:0030246 Trad_2103 1f9956f2bb3978df658109fcb3ec734f 707 Pfam PF03422 Carbohydrate binding module (family 6) 590 703 1.0E-19 T 15-10-2018 IPR005084 Carbohydrate binding module family 6 GO:0030246 Trad_2103 1f9956f2bb3978df658109fcb3ec734f 707 PRINTS PR00134 Glycosyl hydrolase family 10 signature 301 312 3.4E-6 T 15-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 Trad_2103 1f9956f2bb3978df658109fcb3ec734f 707 PRINTS PR00134 Glycosyl hydrolase family 10 signature 256 267 3.4E-6 T 15-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 Trad_2103 1f9956f2bb3978df658109fcb3ec734f 707 PRINTS PR00134 Glycosyl hydrolase family 10 signature 329 341 3.4E-6 T 15-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 Trad_2103 1f9956f2bb3978df658109fcb3ec734f 707 PRINTS PR00134 Glycosyl hydrolase family 10 signature 215 227 3.4E-6 T 15-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 Trad_2103 1f9956f2bb3978df658109fcb3ec734f 707 SUPERFAMILY SSF49785 458 576 1.42E-19 T 15-10-2018 IPR008979 Galactose-binding-like domain superfamily Trad_2103 1f9956f2bb3978df658109fcb3ec734f 707 SMART SM00606 582 705 6.8E-19 T 15-10-2018 IPR006584 Cellulose binding, type IV GO:0030246 Trad_2103 1f9956f2bb3978df658109fcb3ec734f 707 SMART SM00606 453 577 4.7E-11 T 15-10-2018 IPR006584 Cellulose binding, type IV GO:0030246 Trad_2103 1f9956f2bb3978df658109fcb3ec734f 707 SUPERFAMILY SSF49785 585 704 7.09E-21 T 15-10-2018 IPR008979 Galactose-binding-like domain superfamily Trad_2103 1f9956f2bb3978df658109fcb3ec734f 707 Pfam PF00331 Glycosyl hydrolase family 10 166 416 4.3E-61 T 15-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 Trad_2103 1f9956f2bb3978df658109fcb3ec734f 707 Gene3D G3DSA:2.60.40.290 42 150 2.7E-7 T 15-10-2018 IPR012291 CBM2, carbohydrate-binding domain superfamily GO:0004553|GO:0030247 Trad_2103 1f9956f2bb3978df658109fcb3ec734f 707 SMART SM00633 184 435 8.7E-38 T 15-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 Trad_2103 1f9956f2bb3978df658109fcb3ec734f 707 Gene3D G3DSA:3.20.20.80 151 439 2.4E-89 T 15-10-2018 Trad_2103 1f9956f2bb3978df658109fcb3ec734f 707 Gene3D G3DSA:2.60.120.260 457 579 3.9E-25 T 15-10-2018 IPR008979 Galactose-binding-like domain superfamily Trad_2103 1f9956f2bb3978df658109fcb3ec734f 707 SUPERFAMILY SSF51445 161 436 8.87E-87 T 15-10-2018 IPR017853 Glycoside hydrolase superfamily Trad_2036 97456f73a937c153a183454b2a8fa4fa 327 Gene3D G3DSA:3.40.50.2300 69 313 2.8E-52 T 15-10-2018 Trad_2036 97456f73a937c153a183454b2a8fa4fa 327 Pfam PF13377 Periplasmic binding protein-like domain 176 321 2.1E-34 T 15-10-2018 Trad_2036 97456f73a937c153a183454b2a8fa4fa 327 SUPERFAMILY SSF47413 1 50 1.37E-12 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Trad_2036 97456f73a937c153a183454b2a8fa4fa 327 Gene3D G3DSA:3.40.50.2300 167 318 2.8E-52 T 15-10-2018 Trad_2036 97456f73a937c153a183454b2a8fa4fa 327 SMART SM00354 1 71 3.1E-16 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Trad_2036 97456f73a937c153a183454b2a8fa4fa 327 Gene3D G3DSA:1.10.260.40 1 53 4.7E-18 T 15-10-2018 Trad_2036 97456f73a937c153a183454b2a8fa4fa 327 Pfam PF00356 Bacterial regulatory proteins, lacI family 1 43 1.6E-14 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Trad_2036 97456f73a937c153a183454b2a8fa4fa 327 SUPERFAMILY SSF53822 62 323 4.32E-48 T 15-10-2018 IPR028082 Periplasmic binding protein-like I Trad_0179 7dd5ae165cc3c86ce5113d85a8a2346a 317 Gene3D G3DSA:3.40.50.1220 188 317 2.4E-52 T 15-10-2018 Trad_0179 7dd5ae165cc3c86ce5113d85a8a2346a 317 PIRSF PIRSF000089 1 317 1.1E-94 T 15-10-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 Trad_0179 7dd5ae165cc3c86ce5113d85a8a2346a 317 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 194 277 3.5E-33 T 15-10-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 Trad_0179 7dd5ae165cc3c86ce5113d85a8a2346a 317 SUPERFAMILY SSF52467 192 314 1.67E-43 T 15-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily Trad_0179 7dd5ae165cc3c86ce5113d85a8a2346a 317 Pfam PF01012 Electron transfer flavoprotein domain 3 166 5.7E-27 T 15-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 Trad_0179 7dd5ae165cc3c86ce5113d85a8a2346a 317 SUPERFAMILY SSF52402 2 182 3.49E-31 T 15-10-2018 Trad_0179 7dd5ae165cc3c86ce5113d85a8a2346a 317 Gene3D G3DSA:3.40.50.620 1 176 8.5E-36 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Trad_0179 7dd5ae165cc3c86ce5113d85a8a2346a 317 SMART SM00893 2 182 1.5E-20 T 15-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 Trad_2324 006b6204b5e01c8c08c72e33883d08d1 381 SUPERFAMILY SSF56645 2 242 2.75E-83 T 15-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 Trad_2324 006b6204b5e01c8c08c72e33883d08d1 381 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 7 118 2.8E-35 T 15-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 Trad_2324 006b6204b5e01c8c08c72e33883d08d1 381 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 122 217 3.2E-27 T 15-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 Trad_2324 006b6204b5e01c8c08c72e33883d08d1 381 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 336 355 - T 15-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 Trad_2324 006b6204b5e01c8c08c72e33883d08d1 381 Gene3D G3DSA:1.20.140.10 237 380 9.7E-58 T 15-10-2018 Trad_2324 006b6204b5e01c8c08c72e33883d08d1 381 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 124 136 - T 15-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 Trad_2324 006b6204b5e01c8c08c72e33883d08d1 381 SUPERFAMILY SSF47203 228 379 5.15E-60 T 15-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 Trad_2324 006b6204b5e01c8c08c72e33883d08d1 381 Gene3D G3DSA:2.40.110.10 121 236 8.3E-42 T 15-10-2018 Trad_2324 006b6204b5e01c8c08c72e33883d08d1 381 PIRSF PIRSF016578 6 225 5.7E-12 T 15-10-2018 Trad_2324 006b6204b5e01c8c08c72e33883d08d1 381 PIRSF PIRSF016578 239 380 9.2E-14 T 15-10-2018 Trad_2324 006b6204b5e01c8c08c72e33883d08d1 381 Gene3D G3DSA:1.10.540.10 1 120 3.2E-43 T 15-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 Trad_2324 006b6204b5e01c8c08c72e33883d08d1 381 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 229 377 6.5E-52 T 15-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 Trad_0765 ee559a31ba2c4c6d03cc6142104e0a92 532 Pfam PF01476 LysM domain 485 532 3.3E-7 T 15-10-2018 IPR018392 LysM domain Trad_0765 ee559a31ba2c4c6d03cc6142104e0a92 532 Gene3D G3DSA:1.20.5.340 307 412 5.3E-6 T 15-10-2018 Trad_0765 ee559a31ba2c4c6d03cc6142104e0a92 532 Gene3D G3DSA:3.10.350.10 484 531 6.3E-9 T 15-10-2018 IPR036779 LysM domain superfamily Trad_0765 ee559a31ba2c4c6d03cc6142104e0a92 532 SMART SM00257 484 532 5.5E-4 T 15-10-2018 IPR018392 LysM domain Trad_0765 ee559a31ba2c4c6d03cc6142104e0a92 532 SUPERFAMILY SSF54106 484 532 2.35E-5 T 15-10-2018 Trad_1681 b6334d9002f598d12333ebf47f48c4bb 77 Pfam PF13244 Domain of unknown function (DUF4040) 5 67 2.1E-21 T 15-10-2018 IPR025383 Domain of unknown function DUF4040 Trad_1041 8a87fa1436a9fa1e200447d3cd9374f1 278 Gene3D G3DSA:2.30.30.30 119 196 5.1E-31 T 15-10-2018 IPR014722 Ribosomal protein L2, domain 2 Trad_1041 8a87fa1436a9fa1e200447d3cd9374f1 278 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 118 2.0E-33 T 15-10-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 Trad_1041 8a87fa1436a9fa1e200447d3cd9374f1 278 Gene3D G3DSA:4.10.950.10 197 276 5.8E-34 T 15-10-2018 IPR014726 Ribosomal protein L2, domain 3 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Trad_1041 8a87fa1436a9fa1e200447d3cd9374f1 278 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 4 275 1.8E-132 T 15-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 Trad_1041 8a87fa1436a9fa1e200447d3cd9374f1 278 Gene3D G3DSA:2.40.50.140 1 115 4.4E-49 T 15-10-2018 Trad_1041 8a87fa1436a9fa1e200447d3cd9374f1 278 SMART SM01383 42 119 2.7E-41 T 15-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Trad_1041 8a87fa1436a9fa1e200447d3cd9374f1 278 PIRSF PIRSF002158 4 276 4.3E-100 T 15-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Trad_1041 8a87fa1436a9fa1e200447d3cd9374f1 278 SUPERFAMILY SSF50249 4 124 5.83E-50 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold Trad_1041 8a87fa1436a9fa1e200447d3cd9374f1 278 SUPERFAMILY SSF50104 127 273 2.41E-60 T 15-10-2018 IPR008991 Translation protein SH3-like domain superfamily Trad_1041 8a87fa1436a9fa1e200447d3cd9374f1 278 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 128 251 9.7E-54 T 15-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 Trad_1041 8a87fa1436a9fa1e200447d3cd9374f1 278 SMART SM01382 125 253 2.3E-86 T 15-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 Trad_1041 8a87fa1436a9fa1e200447d3cd9374f1 278 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 275 48.338 T 15-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 Trad_0357 00b369e83c647ffdce00ed8c4fe62487 579 SUPERFAMILY SSF56425 235 353 6.88E-41 T 15-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Trad_0357 00b369e83c647ffdce00ed8c4fe62487 579 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 6.5E-8 T 15-10-2018 Trad_0357 00b369e83c647ffdce00ed8c4fe62487 579 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 363 385 6.5E-8 T 15-10-2018 Trad_0357 00b369e83c647ffdce00ed8c4fe62487 579 Gene3D G3DSA:3.90.700.10 245 348 2.1E-155 T 15-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Trad_0357 00b369e83c647ffdce00ed8c4fe62487 579 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 378 385 1.1E-5 T 15-10-2018 Trad_0357 00b369e83c647ffdce00ed8c4fe62487 579 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 1.1E-5 T 15-10-2018 Trad_0357 00b369e83c647ffdce00ed8c4fe62487 579 SUPERFAMILY SSF51905 5 427 2.69E-73 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Trad_0357 00b369e83c647ffdce00ed8c4fe62487 579 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 5 579 1.3E-273 T 15-10-2018 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 Trad_0357 00b369e83c647ffdce00ed8c4fe62487 579 PIRSF PIRSF000171 1 575 6.7E-49 T 15-10-2018 Trad_0357 00b369e83c647ffdce00ed8c4fe62487 579 Pfam PF02910 Fumarate reductase flavoprotein C-term 454 579 7.5E-45 T 15-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Trad_0357 00b369e83c647ffdce00ed8c4fe62487 579 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 8 579 1.6E-239 T 15-10-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Trad_0357 00b369e83c647ffdce00ed8c4fe62487 579 Gene3D G3DSA:1.20.58.100 428 541 9.6E-35 T 15-10-2018 Trad_0357 00b369e83c647ffdce00ed8c4fe62487 579 SUPERFAMILY SSF46977 446 579 4.32E-49 T 15-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Trad_0357 00b369e83c647ffdce00ed8c4fe62487 579 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 15-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Trad_0357 00b369e83c647ffdce00ed8c4fe62487 579 Pfam PF00890 FAD binding domain 8 400 1.2E-109 T 15-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 Trad_0357 00b369e83c647ffdce00ed8c4fe62487 579 Gene3D G3DSA:4.10.80.40 542 575 9.4E-6 T 15-10-2018 Trad_0357 00b369e83c647ffdce00ed8c4fe62487 579 Gene3D G3DSA:3.50.50.60 8 411 2.1E-155 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Trad_1151 8c74d5417ab6edf07fcefcc8e9d96a46 363 Pfam PF01032 FecCD transport family 48 360 3.4E-91 T 15-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 Trad_1151 8c74d5417ab6edf07fcefcc8e9d96a46 363 Gene3D G3DSA:1.10.3470.10 37 362 1.3E-94 T 15-10-2018 IPR037294 ABC transporter, BtuC-like Trad_1151 8c74d5417ab6edf07fcefcc8e9d96a46 363 SUPERFAMILY SSF81345 37 360 1.7E-82 T 15-10-2018 IPR037294 ABC transporter, BtuC-like Trad_1090 bc49d0b02fd582f579f9b009e59a7d5b 289 SMART SM00450 151 278 2.0E-23 T 15-10-2018 IPR001763 Rhodanese-like domain Trad_1090 bc49d0b02fd582f579f9b009e59a7d5b 289 SMART SM00450 10 124 1.8E-17 T 15-10-2018 IPR001763 Rhodanese-like domain Trad_1090 bc49d0b02fd582f579f9b009e59a7d5b 289 ProSitePatterns PS00683 Rhodanese C-terminal signature. 262 272 - T 15-10-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927|Reactome: R-HSA-1614558 Trad_1090 bc49d0b02fd582f579f9b009e59a7d5b 289 SUPERFAMILY SSF52821 158 283 3.14E-38 T 15-10-2018 IPR036873 Rhodanese-like domain superfamily Trad_1090 bc49d0b02fd582f579f9b009e59a7d5b 289 Gene3D G3DSA:3.40.250.10 1 144 1.5E-42 T 15-10-2018 IPR036873 Rhodanese-like domain superfamily Trad_1090 bc49d0b02fd582f579f9b009e59a7d5b 289 Pfam PF00581 Rhodanese-like domain 11 120 5.2E-15 T 15-10-2018 IPR001763 Rhodanese-like domain Trad_1090 bc49d0b02fd582f579f9b009e59a7d5b 289 Pfam PF00581 Rhodanese-like domain 156 273 2.8E-19 T 15-10-2018 IPR001763 Rhodanese-like domain Trad_1090 bc49d0b02fd582f579f9b009e59a7d5b 289 SUPERFAMILY SSF52821 3 138 7.33E-38 T 15-10-2018 IPR036873 Rhodanese-like domain superfamily Trad_1090 bc49d0b02fd582f579f9b009e59a7d5b 289 ProSitePatterns PS00380 Rhodanese signature 1. 36 47 - T 15-10-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927|Reactome: R-HSA-1614558 Trad_1090 bc49d0b02fd582f579f9b009e59a7d5b 289 Gene3D G3DSA:3.40.250.10 145 285 2.9E-47 T 15-10-2018 IPR036873 Rhodanese-like domain superfamily Trad_1887 342e18aa680228f8e512c66bfd39ef8c 326 ProSitePatterns PS00082 Extradiol ring-cleavage dioxygenases signature. 243 264 - T 15-10-2018 IPR000486 Extradiol ring-cleavage dioxygenase, class I /II GO:0003824|GO:0006725|GO:0008198|GO:0055114 Trad_1887 342e18aa680228f8e512c66bfd39ef8c 326 Gene3D G3DSA:3.10.180.10 3 146 8.1E-47 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Trad_1887 342e18aa680228f8e512c66bfd39ef8c 326 Gene3D G3DSA:3.10.180.10 147 306 2.5E-42 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Trad_1887 342e18aa680228f8e512c66bfd39ef8c 326 TIGRFAM TIGR02295 HpaD: 3,4-dihydroxyphenylacetate 2,3-dioxygenase 12 305 2.4E-122 T 15-10-2018 IPR011981 3,4-dihydroxyphenylacetate 2,3-dioxygenase, Mn/Fe-type Trad_1887 342e18aa680228f8e512c66bfd39ef8c 326 SUPERFAMILY SSF54593 8 286 5.93E-46 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Trad_1887 342e18aa680228f8e512c66bfd39ef8c 326 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 17 123 2.4E-8 T 15-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Trad_1887 342e18aa680228f8e512c66bfd39ef8c 326 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 147 265 3.3E-15 T 15-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Trad_2226 0d9481f15151d28dff1be46c46aaac1b 240 Pfam PF04402 Protein of unknown function (DUF541) 38 237 4.7E-42 T 15-10-2018 IPR007497 Protein of unknown function DUF541 Trad_2226 0d9481f15151d28dff1be46c46aaac1b 240 Gene3D G3DSA:3.30.110.170 40 237 9.0E-56 T 15-10-2018 Trad_2226 0d9481f15151d28dff1be46c46aaac1b 240 Gene3D G3DSA:3.30.70.2970 50 157 9.0E-56 T 15-10-2018 Trad_1931 e1cae8ee22c6d3a23e598c31a0814c47 827 SUPERFAMILY SSF101904 498 812 4.71E-100 T 15-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal Trad_1931 e1cae8ee22c6d3a23e598c31a0814c47 827 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 10 807 0.0 T 15-10-2018 Trad_1931 e1cae8ee22c6d3a23e598c31a0814c47 827 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 712 755 1.9E-12 T 15-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Trad_1931 e1cae8ee22c6d3a23e598c31a0814c47 827 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 610 650 1.4E-6 T 15-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Trad_1931 e1cae8ee22c6d3a23e598c31a0814c47 827 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 658 703 2.8E-15 T 15-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Trad_1931 e1cae8ee22c6d3a23e598c31a0814c47 827 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 553 602 2.0E-9 T 15-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Trad_1931 e1cae8ee22c6d3a23e598c31a0814c47 827 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 762 807 7.2E-11 T 15-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Trad_1931 e1cae8ee22c6d3a23e598c31a0814c47 827 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 504 541 3.1E-10 T 15-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Trad_1931 e1cae8ee22c6d3a23e598c31a0814c47 827 Gene3D G3DSA:3.30.1360.40 237 332 2.4E-207 T 15-10-2018 Trad_1931 e1cae8ee22c6d3a23e598c31a0814c47 827 Gene3D G3DSA:2.120.10.90 496 809 3.6E-116 T 15-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal Trad_1931 e1cae8ee22c6d3a23e598c31a0814c47 827 Gene3D G3DSA:1.10.268.10 369 458 2.4E-207 T 15-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 Trad_1931 e1cae8ee22c6d3a23e598c31a0814c47 827 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 7 810 23.865 T 15-10-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Trad_1931 e1cae8ee22c6d3a23e598c31a0814c47 827 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 34 471 4.3E-158 T 15-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Trad_1931 e1cae8ee22c6d3a23e598c31a0814c47 827 SMART SM00434 13 464 9.9E-269 T 15-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Trad_1931 e1cae8ee22c6d3a23e598c31a0814c47 827 SUPERFAMILY SSF56719 32 486 3.53E-174 T 15-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 Trad_1931 e1cae8ee22c6d3a23e598c31a0814c47 827 Gene3D G3DSA:3.90.199.10 34 485 2.4E-207 T 15-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 Trad_0953 4b0cb3666734be47382a9c64955c64aa 186 TIGRFAM TIGR02258 2_5_ligase: 2'-5' RNA ligase 1 178 2.4E-36 T 15-10-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 Trad_0953 4b0cb3666734be47382a9c64955c64aa 186 SUPERFAMILY SSF55144 2 181 1.01E-41 T 15-10-2018 IPR009097 Cyclic phosphodiesterase Trad_0953 4b0cb3666734be47382a9c64955c64aa 186 Pfam PF13563 2'-5' RNA ligase superfamily 22 162 2.3E-17 T 15-10-2018 Trad_0953 4b0cb3666734be47382a9c64955c64aa 186 Hamap MF_01940 RNA 2',3'-cyclic phosphodiesterase [thpR]. 1 180 24.126 T 15-10-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 Trad_0953 4b0cb3666734be47382a9c64955c64aa 186 Gene3D G3DSA:3.90.1140.10 1 184 7.6E-47 T 15-10-2018 Trad_1758 2b1ae865b1885519dec56cd6af07fe1f 685 SUPERFAMILY SSF55073 532 685 2.2E-46 T 15-10-2018 IPR029787 Nucleotide cyclase Trad_1758 2b1ae865b1885519dec56cd6af07fe1f 685 Gene3D G3DSA:1.25.40.10 341 510 3.1E-15 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Trad_1758 2b1ae865b1885519dec56cd6af07fe1f 685 Pfam PF13181 Tetratricopeptide repeat 429 453 0.18 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Trad_1758 2b1ae865b1885519dec56cd6af07fe1f 685 Pfam PF13374 Tetratricopeptide repeat 267 299 0.011 T 15-10-2018 Trad_1758 2b1ae865b1885519dec56cd6af07fe1f 685 SUPERFAMILY SSF48452 49 222 1.8E-12 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Trad_1758 2b1ae865b1885519dec56cd6af07fe1f 685 SUPERFAMILY SSF48452 210 457 7.97E-27 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Trad_1758 2b1ae865b1885519dec56cd6af07fe1f 685 Pfam PF00990 Diguanylate cyclase, GGDEF domain 530 683 2.8E-40 T 15-10-2018 IPR000160 GGDEF domain Trad_1758 2b1ae865b1885519dec56cd6af07fe1f 685 Gene3D G3DSA:1.25.40.10 24 139 1.5E-7 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Trad_1758 2b1ae865b1885519dec56cd6af07fe1f 685 SMART SM00267 516 685 3.8E-53 T 15-10-2018 IPR000160 GGDEF domain Trad_1758 2b1ae865b1885519dec56cd6af07fe1f 685 Gene3D G3DSA:3.30.70.270 513 685 1.7E-56 T 15-10-2018 Trad_1758 2b1ae865b1885519dec56cd6af07fe1f 685 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 523 684 2.4E-50 T 15-10-2018 IPR000160 GGDEF domain Trad_1758 2b1ae865b1885519dec56cd6af07fe1f 685 Gene3D G3DSA:1.25.40.10 145 340 1.0E-26 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Trad_1758 2b1ae865b1885519dec56cd6af07fe1f 685 SMART SM00028 427 460 4.1 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Trad_1758 2b1ae865b1885519dec56cd6af07fe1f 685 SMART SM00028 347 380 20.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Trad_1758 2b1ae865b1885519dec56cd6af07fe1f 685 SMART SM00028 307 340 260.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Trad_1758 2b1ae865b1885519dec56cd6af07fe1f 685 SMART SM00028 107 140 120.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Trad_1758 2b1ae865b1885519dec56cd6af07fe1f 685 SMART SM00028 227 260 8.9 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Trad_1758 2b1ae865b1885519dec56cd6af07fe1f 685 SMART SM00028 267 300 25.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Trad_1758 2b1ae865b1885519dec56cd6af07fe1f 685 SMART SM00028 187 220 240.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Trad_1758 2b1ae865b1885519dec56cd6af07fe1f 685 SMART SM00028 387 420 13.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Trad_2483 1e03d1546a4e23a8185aaafb8a63ae84 54 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 5 53 18.344 T 15-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_2483 1e03d1546a4e23a8185aaafb8a63ae84 54 Gene3D G3DSA:2.20.28.120 1 54 2.1E-26 T 15-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_2483 1e03d1546a4e23a8185aaafb8a63ae84 54 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 7 53 5.5E-22 T 15-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_2483 1e03d1546a4e23a8185aaafb8a63ae84 54 SUPERFAMILY SSF57829 2 53 6.59E-20 T 15-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 Trad_2483 1e03d1546a4e23a8185aaafb8a63ae84 54 Pfam PF00471 Ribosomal protein L33 8 53 4.2E-22 T 15-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_2483 1e03d1546a4e23a8185aaafb8a63ae84 54 ProSitePatterns PS00582 Ribosomal protein L33 signature. 21 40 - T 15-10-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Trad_0068 892b5b3b565a8828e8a05d6b277c48e8 247 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 247 97.724 T 15-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 Trad_0068 892b5b3b565a8828e8a05d6b277c48e8 247 Gene3D G3DSA:1.10.1270.20 174 244 1.9E-29 T 15-10-2018 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 Trad_0068 892b5b3b565a8828e8a05d6b277c48e8 247 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 229 3.2E-82 T 15-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 Trad_0068 892b5b3b565a8828e8a05d6b277c48e8 247 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 219 3.5E-59 T 15-10-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 Trad_0068 892b5b3b565a8828e8a05d6b277c48e8 247 PIRSF PIRSF000386 1 244 1.1E-96 T 15-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 Trad_0068 892b5b3b565a8828e8a05d6b277c48e8 247 Gene3D G3DSA:3.40.1280.10 1 173 9.8E-61 T 15-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Trad_0068 892b5b3b565a8828e8a05d6b277c48e8 247 SUPERFAMILY SSF75217 1 243 3.34E-88 T 15-10-2018 IPR029028 Alpha/beta knot methyltransferases Trad_2944 99cf30214ecb8d4915db5b86d6b17256 294 SUPERFAMILY SSF81321 32 282 1.98E-27 T 15-10-2018 Trad_2944 99cf30214ecb8d4915db5b86d6b17256 294 SMART SM01021 31 293 3.2E-5 T 15-10-2018 IPR001425 Archaeal/bacterial/fungal rhodopsins GO:0005216|GO:0006811|GO:0016020 Trad_2944 99cf30214ecb8d4915db5b86d6b17256 294 Pfam PF01036 Bacteriorhodopsin-like protein 34 284 2.4E-13 T 15-10-2018 IPR001425 Archaeal/bacterial/fungal rhodopsins GO:0005216|GO:0006811|GO:0016020 Trad_2944 99cf30214ecb8d4915db5b86d6b17256 294 Gene3D G3DSA:1.20.1070.10 5 291 1.6E-89 T 15-10-2018 Trad_2944 99cf30214ecb8d4915db5b86d6b17256 294 PRINTS PR00251 Bacterial opsin signature 177 198 2.1E-5 T 15-10-2018 IPR001425 Archaeal/bacterial/fungal rhodopsins GO:0005216|GO:0006811|GO:0016020 Trad_2944 99cf30214ecb8d4915db5b86d6b17256 294 PRINTS PR00251 Bacterial opsin signature 218 236 2.1E-5 T 15-10-2018 IPR001425 Archaeal/bacterial/fungal rhodopsins GO:0005216|GO:0006811|GO:0016020 Trad_2944 99cf30214ecb8d4915db5b86d6b17256 294 PRINTS PR00251 Bacterial opsin signature 118 139 2.1E-5 T 15-10-2018 IPR001425 Archaeal/bacterial/fungal rhodopsins GO:0005216|GO:0006811|GO:0016020 Trad_0567 8fc3a9277608581597b98a33796e0b8b 250 Gene3D G3DSA:3.40.1390.30 96 221 5.8E-78 T 15-10-2018 Trad_0567 8fc3a9277608581597b98a33796e0b8b 250 SUPERFAMILY SSF102705 1 244 7.59E-65 T 15-10-2018 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily Trad_0567 8fc3a9277608581597b98a33796e0b8b 250 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 1 247 4.6E-51 T 15-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 Trad_0567 8fc3a9277608581597b98a33796e0b8b 250 Gene3D G3DSA:3.40.1390.30 6 238 5.8E-78 T 15-10-2018 Trad_0567 8fc3a9277608581597b98a33796e0b8b 250 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 5 238 4.9E-56 T 15-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 Trad_1963 24ab93723f5eb886b25e7bd5b057ebef 322 SUPERFAMILY SSF53784 2 320 8.5E-120 T 15-10-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Trad_1963 24ab93723f5eb886b25e7bd5b057ebef 322 PIRSF PIRSF000532 1 321 4.6E-120 T 15-10-2018 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 Trad_1963 24ab93723f5eb886b25e7bd5b057ebef 322 Gene3D G3DSA:3.40.50.460 140 254 2.1E-112 T 15-10-2018 Trad_1963 24ab93723f5eb886b25e7bd5b057ebef 322 Hamap MF_00339 ATP-dependent 6-phosphofructokinase [pfkA]. 1 321 45.88 T 15-10-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 Trad_1963 24ab93723f5eb886b25e7bd5b057ebef 322 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 159 175 5.9E-83 T 15-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Trad_1963 24ab93723f5eb886b25e7bd5b057ebef 322 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 177 194 5.9E-83 T 15-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Trad_1963 24ab93723f5eb886b25e7bd5b057ebef 322 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 121 138 5.9E-83 T 15-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Trad_1963 24ab93723f5eb886b25e7bd5b057ebef 322 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 93 109 5.9E-83 T 15-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Trad_1963 24ab93723f5eb886b25e7bd5b057ebef 322 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 139 157 5.9E-83 T 15-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Trad_1963 24ab93723f5eb886b25e7bd5b057ebef 322 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 242 264 5.9E-83 T 15-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Trad_1963 24ab93723f5eb886b25e7bd5b057ebef 322 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 6 25 5.9E-83 T 15-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Trad_1963 24ab93723f5eb886b25e7bd5b057ebef 322 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 31 44 5.9E-83 T 15-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Trad_1963 24ab93723f5eb886b25e7bd5b057ebef 322 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 213 225 5.9E-83 T 15-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Trad_1963 24ab93723f5eb886b25e7bd5b057ebef 322 TIGRFAM TIGR02482 PFKA_ATP: 6-phosphofructokinase 4 302 8.5E-125 T 15-10-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 Trad_1963 24ab93723f5eb886b25e7bd5b057ebef 322 Gene3D G3DSA:3.40.50.450 4 284 2.1E-112 T 15-10-2018 Trad_1963 24ab93723f5eb886b25e7bd5b057ebef 322 ProSitePatterns PS00433 Phosphofructokinase signature. 246 264 - T 15-10-2018 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Trad_1963 24ab93723f5eb886b25e7bd5b057ebef 322 Pfam PF00365 Phosphofructokinase 4 278 1.1E-112 T 15-10-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Trad_2168 8c06477694c9a74227d4936332462a9d 344 Gene3D G3DSA:3.20.20.70 8 344 2.2E-116 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Trad_2168 8c06477694c9a74227d4936332462a9d 344 Pfam PF01070 FMN-dependent dehydrogenase 181 337 1.8E-19 T 15-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 Trad_2168 8c06477694c9a74227d4936332462a9d 344 Pfam PF01070 FMN-dependent dehydrogenase 30 102 3.9E-7 T 15-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 Trad_2168 8c06477694c9a74227d4936332462a9d 344 Hamap MF_00354 Isopentenyl-diphosphate delta-isomerase [fni]. 10 343 37.25 T 15-10-2018 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 Trad_2168 8c06477694c9a74227d4936332462a9d 344 SUPERFAMILY SSF51395 31 340 5.5E-70 T 15-10-2018 Trad_2168 8c06477694c9a74227d4936332462a9d 344 TIGRFAM TIGR02151 IPP_isom_2: isopentenyl-diphosphate delta-isomerase, type 2 13 340 2.0E-109 T 15-10-2018 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 Trad_2168 8c06477694c9a74227d4936332462a9d 344 PIRSF PIRSF003314 8 343 7.4E-116 T 15-10-2018 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 Trad_2317 d7117200951e9a165dffbd23873c1603 289 Pfam PF03631 Virulence factor BrkB 24 276 7.6E-66 T 15-10-2018 IPR017039 Virulence factor BrkB Trad_2317 d7117200951e9a165dffbd23873c1603 289 PIRSF PIRSF035875 6 289 3.1E-82 T 15-10-2018 IPR017039 Virulence factor BrkB Trad_2317 d7117200951e9a165dffbd23873c1603 289 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 18 275 2.4E-37 T 15-10-2018 IPR017039 Virulence factor BrkB Trad_0264 52f2f3715bf043dc4c94bd65eca10910 469 SUPERFAMILY SSF101960 35 466 8.5E-138 T 15-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily Trad_0264 52f2f3715bf043dc4c94bd65eca10910 469 Pfam PF01458 Uncharacterized protein family (UPF0051) 215 440 5.5E-75 T 15-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 Trad_0264 52f2f3715bf043dc4c94bd65eca10910 469 TIGRFAM TIGR01980 sufB: FeS assembly protein SufB 13 460 2.3E-212 T 15-10-2018 IPR010231 SUF system FeS cluster assembly, SufB GO:0016226 Trad_2413 612d4f48a87983e3d997db9fe63fad40 330 Pfam PF00248 Aldo/keto reductase family 16 307 9.1E-73 T 15-10-2018 IPR023210 NADP-dependent oxidoreductase domain Trad_2413 612d4f48a87983e3d997db9fe63fad40 330 SUPERFAMILY SSF51430 1 311 3.01E-99 T 15-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Trad_2413 612d4f48a87983e3d997db9fe63fad40 330 Gene3D G3DSA:3.20.20.100 1 326 6.1E-115 T 15-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Trad_2725 570ca95508493f51635dfe8a3e063a03 360 Gene3D G3DSA:3.40.50.2000 171 336 2.4E-42 T 15-10-2018 Trad_2725 570ca95508493f51635dfe8a3e063a03 360 Pfam PF00534 Glycosyl transferases group 1 234 329 1.3E-14 T 15-10-2018 IPR001296 Glycosyl transferase, family 1 Trad_2725 570ca95508493f51635dfe8a3e063a03 360 SUPERFAMILY SSF53756 11 349 2.79E-47 T 15-10-2018 Trad_2725 570ca95508493f51635dfe8a3e063a03 360 Gene3D G3DSA:3.40.50.2000 11 347 2.4E-42 T 15-10-2018 Trad_1293 afadcce7fc4d5db3845cbcc6b00340bb 351 SUPERFAMILY SSF161098 107 335 1.47E-19 T 15-10-2018 IPR035906 MetI-like superfamily Trad_1293 afadcce7fc4d5db3845cbcc6b00340bb 351 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 130 349 2.4E-45 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Trad_0390 dab772ce3c9a5be7f84b21cb0c16650c 480 Pfam PF00271 Helicase conserved C-terminal domain 323 426 1.7E-15 T 15-10-2018 IPR001650 Helicase, C-terminal Trad_0390 dab772ce3c9a5be7f84b21cb0c16650c 480 SUPERFAMILY SSF52540 120 442 1.09E-42 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_0390 dab772ce3c9a5be7f84b21cb0c16650c 480 Pfam PF04851 Type III restriction enzyme, res subunit 78 217 2.9E-20 T 15-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 Trad_0390 dab772ce3c9a5be7f84b21cb0c16650c 480 Gene3D G3DSA:3.40.50.300 245 442 1.5E-41 T 15-10-2018 Trad_0390 dab772ce3c9a5be7f84b21cb0c16650c 480 SMART SM00487 75 254 2.1E-31 T 15-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Trad_0390 dab772ce3c9a5be7f84b21cb0c16650c 480 Gene3D G3DSA:3.40.50.300 71 244 3.8E-41 T 15-10-2018 Trad_0390 dab772ce3c9a5be7f84b21cb0c16650c 480 SMART SM00490 325 426 8.2E-14 T 15-10-2018 IPR001650 Helicase, C-terminal Trad_0390 dab772ce3c9a5be7f84b21cb0c16650c 480 Gene3D G3DSA:3.40.1170.30 5 64 1.0E-5 T 15-10-2018 Trad_0756 bb470d747cb38cc416d1cdb778d9b410 413 Pfam PF01743 Poly A polymerase head domain 42 170 5.8E-20 T 15-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 Trad_0756 bb470d747cb38cc416d1cdb778d9b410 413 Gene3D G3DSA:1.10.3090.10 166 398 1.6E-23 T 15-10-2018 Trad_0756 bb470d747cb38cc416d1cdb778d9b410 413 Gene3D G3DSA:3.30.460.10 14 165 6.6E-28 T 15-10-2018 Trad_0756 bb470d747cb38cc416d1cdb778d9b410 413 SUPERFAMILY SSF81301 37 167 5.56E-21 T 15-10-2018 Trad_0756 bb470d747cb38cc416d1cdb778d9b410 413 SUPERFAMILY SSF81891 168 393 3.27E-23 T 15-10-2018 Trad_0855 559583493be77ef567ba4b50fdb83cd5 410 Pfam PF07907 YibE/F-like protein 113 350 1.3E-66 T 15-10-2018 IPR012507 YibE/F-like Trad_2587 470661f76fbd5c8abc27a133d5cc9d24 314 Gene3D G3DSA:1.10.3720.10 85 307 1.9E-23 T 15-10-2018 IPR035906 MetI-like superfamily Trad_2587 470661f76fbd5c8abc27a133d5cc9d24 314 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 313 3.3E-36 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Trad_2587 470661f76fbd5c8abc27a133d5cc9d24 314 SUPERFAMILY SSF161098 91 295 2.09E-18 T 15-10-2018 IPR035906 MetI-like superfamily Trad_0459 7d9af686a68f094c06e1332f4f846974 817 SMART SM00382 361 514 2.9E-12 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_0459 7d9af686a68f094c06e1332f4f846974 817 SUPERFAMILY SSF52540 311 599 6.46E-51 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_0459 7d9af686a68f094c06e1332f4f846974 817 SMART SM00464 11 203 1.2E-51 T 15-10-2018 IPR003111 Lon, substrate-binding domain Trad_0459 7d9af686a68f094c06e1332f4f846974 817 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 739 757 4.1E-48 T 15-10-2018 Trad_0459 7d9af686a68f094c06e1332f4f846974 817 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 686 705 4.1E-48 T 15-10-2018 Trad_0459 7d9af686a68f094c06e1332f4f846974 817 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 716 735 4.1E-48 T 15-10-2018 Trad_0459 7d9af686a68f094c06e1332f4f846974 817 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 608 624 4.1E-48 T 15-10-2018 Trad_0459 7d9af686a68f094c06e1332f4f846974 817 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 369 388 4.1E-48 T 15-10-2018 Trad_0459 7d9af686a68f094c06e1332f4f846974 817 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 583 784 1.5E-84 T 15-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 Trad_0459 7d9af686a68f094c06e1332f4f846974 817 SUPERFAMILY SSF88697 12 202 1.37E-31 T 15-10-2018 IPR015947 PUA-like superfamily Trad_0459 7d9af686a68f094c06e1332f4f846974 817 Gene3D G3DSA:3.30.230.10 606 792 7.4E-75 T 15-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Trad_0459 7d9af686a68f094c06e1332f4f846974 817 Gene3D G3DSA:1.20.58.1480 123 246 5.1E-33 T 15-10-2018 Trad_0459 7d9af686a68f094c06e1332f4f846974 817 Gene3D G3DSA:1.10.8.60 505 597 5.6E-33 T 15-10-2018 Trad_0459 7d9af686a68f094c06e1332f4f846974 817 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 365 501 1.3E-23 T 15-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Trad_0459 7d9af686a68f094c06e1332f4f846974 817 Hamap MF_01973 Lon protease [lon]. 12 785 67.857 T 15-10-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 Trad_0459 7d9af686a68f094c06e1332f4f846974 817 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 12 202 2.6E-33 T 15-10-2018 IPR003111 Lon, substrate-binding domain Trad_0459 7d9af686a68f094c06e1332f4f846974 817 TIGRFAM TIGR00763 lon: endopeptidase La 14 781 2.1E-276 T 15-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 Trad_0459 7d9af686a68f094c06e1332f4f846974 817 PIRSF PIRSF001174 2 787 4.3E-301 T 15-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 Trad_0459 7d9af686a68f094c06e1332f4f846974 817 Gene3D G3DSA:2.30.130.40 5 117 2.9E-26 T 15-10-2018 Trad_0459 7d9af686a68f094c06e1332f4f846974 817 Gene3D G3DSA:3.40.50.300 315 504 2.5E-66 T 15-10-2018 Trad_0459 7d9af686a68f094c06e1332f4f846974 817 SUPERFAMILY SSF54211 608 783 7.59E-52 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Trad_0219 96674e747ffc9348cb40b5a6e946a109 300 Gene3D G3DSA:1.20.1260.130 2 300 1.1E-120 T 15-10-2018 Trad_0219 96674e747ffc9348cb40b5a6e946a109 300 SUPERFAMILY SSF47240 1 296 2.78E-98 T 15-10-2018 IPR009078 Ferritin-like superfamily Trad_0219 96674e747ffc9348cb40b5a6e946a109 300 Pfam PF05067 Manganese containing catalase 1 298 2.9E-84 T 15-10-2018 IPR007760 Manganese catalase Trad_2802 65b5511bc4d723d8d52d5e12d5355e60 354 Gene3D G3DSA:1.10.287.90 30 118 1.3E-22 T 15-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Trad_2802 65b5511bc4d723d8d52d5e12d5355e60 354 Pfam PF00034 Cytochrome c 252 344 3.1E-10 T 15-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Trad_2802 65b5511bc4d723d8d52d5e12d5355e60 354 TIGRFAM TIGR02866 CoxB: cytochrome c oxidase, subunit II 37 234 1.0E-58 T 15-10-2018 IPR014222 Cytochrome c oxidase, subunit II GO:0016021|GO:0016491 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Trad_2802 65b5511bc4d723d8d52d5e12d5355e60 354 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 170 218 - T 15-10-2018 IPR001505 Copper centre Cu(A) GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Trad_2802 65b5511bc4d723d8d52d5e12d5355e60 354 SUPERFAMILY SSF49503 120 289 6.74E-49 T 15-10-2018 IPR008972 Cupredoxin Trad_2802 65b5511bc4d723d8d52d5e12d5355e60 354 PRINTS PR01166 Cytochrome c oxidase subunit II signature 86 98 2.4E-6 T 15-10-2018 Trad_2802 65b5511bc4d723d8d52d5e12d5355e60 354 PRINTS PR01166 Cytochrome c oxidase subunit II signature 207 224 2.4E-6 T 15-10-2018 Trad_2802 65b5511bc4d723d8d52d5e12d5355e60 354 PRINTS PR01166 Cytochrome c oxidase subunit II signature 98 118 2.4E-6 T 15-10-2018 Trad_2802 65b5511bc4d723d8d52d5e12d5355e60 354 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 149 222 6.6E-17 T 15-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Trad_2802 65b5511bc4d723d8d52d5e12d5355e60 354 Gene3D G3DSA:2.60.40.2600 122 353 3.5E-78 T 15-10-2018 Trad_2802 65b5511bc4d723d8d52d5e12d5355e60 354 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 35 111 4.0E-13 T 15-10-2018 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Trad_2802 65b5511bc4d723d8d52d5e12d5355e60 354 SUPERFAMILY SSF81464 21 115 6.87E-18 T 15-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Trad_2802 65b5511bc4d723d8d52d5e12d5355e60 354 SUPERFAMILY SSF46626 250 347 1.64E-20 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Trad_0732 a83a5de5aa84bba91bc6c3f2ce8090ef 403 TIGRFAM TIGR00339 sopT: sulfate adenylyltransferase 10 383 2.7E-136 T 15-10-2018 IPR002650 Sulphate adenylyltransferase GO:0000103|GO:0004781 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 Trad_0732 a83a5de5aa84bba91bc6c3f2ce8090ef 403 Pfam PF14306 PUA-like domain 8 165 6.5E-56 T 15-10-2018 IPR025980 ATP-sulfurylase PUA-like domain KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 Trad_0732 a83a5de5aa84bba91bc6c3f2ce8090ef 403 SUPERFAMILY SSF52374 173 386 4.38E-80 T 15-10-2018 Trad_0732 a83a5de5aa84bba91bc6c3f2ce8090ef 403 Hamap MF_00066 Sulfate adenylyltransferase [sat]. 31 388 49.747 T 15-10-2018 IPR020792 Sulphate adenylyltransferase, prokaryotic-type GO:0000103|GO:0004781 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 Trad_0732 a83a5de5aa84bba91bc6c3f2ce8090ef 403 SUPERFAMILY SSF88697 8 167 2.88E-50 T 15-10-2018 IPR015947 PUA-like superfamily Trad_0732 a83a5de5aa84bba91bc6c3f2ce8090ef 403 Pfam PF01747 ATP-sulfurylase 173 384 5.8E-91 T 15-10-2018 IPR024951 Sulphate adenylyltransferase catalytic domain GO:0004781 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 Trad_0732 a83a5de5aa84bba91bc6c3f2ce8090ef 403 Gene3D G3DSA:3.10.400.10 6 168 1.2E-52 T 15-10-2018 Trad_0732 a83a5de5aa84bba91bc6c3f2ce8090ef 403 Gene3D G3DSA:3.40.50.620 174 385 9.0E-92 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Trad_2790 9378ac7aa07de25e3bf847eb62ef305a 62 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 6 59 4.8E-25 T 15-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_2790 9378ac7aa07de25e3bf847eb62ef305a 62 SUPERFAMILY SSF57829 5 59 2.38E-21 T 15-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 Trad_2790 9378ac7aa07de25e3bf847eb62ef305a 62 Pfam PF01783 Ribosomal L32p protein family 5 58 7.9E-26 T 15-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_2790 9378ac7aa07de25e3bf847eb62ef305a 62 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 58 20.057 T 15-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_1721 31a0715bcd14d59657abf9ff9a70471c 389 Gene3D G3DSA:3.20.20.140 52 348 1.7E-99 T 15-10-2018 Trad_1721 31a0715bcd14d59657abf9ff9a70471c 389 SUPERFAMILY SSF51338 349 385 4.32E-6 T 15-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Trad_1721 31a0715bcd14d59657abf9ff9a70471c 389 SUPERFAMILY SSF51556 50 349 2.48E-79 T 15-10-2018 IPR032466 Metal-dependent hydrolase Trad_1721 31a0715bcd14d59657abf9ff9a70471c 389 Pfam PF01979 Amidohydrolase family 46 383 1.6E-37 T 15-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Trad_1721 31a0715bcd14d59657abf9ff9a70471c 389 Gene3D G3DSA:2.30.40.10 45 384 1.7E-99 T 15-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Trad_2447 1b9127353418f929a028ac9a10ee8121 358 Gene3D G3DSA:3.40.50.2300 11 141 2.4E-33 T 15-10-2018 Trad_2447 1b9127353418f929a028ac9a10ee8121 358 Pfam PF03704 Bacterial transcriptional activator domain 239 346 2.7E-6 T 15-10-2018 IPR005158 Bacterial transcriptional activator domain Trad_2447 1b9127353418f929a028ac9a10ee8121 358 Gene3D G3DSA:1.25.40.10 235 358 2.0E-11 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Trad_2447 1b9127353418f929a028ac9a10ee8121 358 Pfam PF00072 Response regulator receiver domain 15 128 8.7E-24 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Trad_2447 1b9127353418f929a028ac9a10ee8121 358 SUPERFAMILY SSF52172 15 139 4.41E-34 T 15-10-2018 IPR011006 CheY-like superfamily Trad_2447 1b9127353418f929a028ac9a10ee8121 358 Gene3D G3DSA:1.10.10.10 142 231 9.2E-14 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Trad_2447 1b9127353418f929a028ac9a10ee8121 358 SMART SM00862 159 230 0.003 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Trad_2447 1b9127353418f929a028ac9a10ee8121 358 SMART SM01043 238 355 1.0E-4 T 15-10-2018 IPR005158 Bacterial transcriptional activator domain Trad_2447 1b9127353418f929a028ac9a10ee8121 358 SUPERFAMILY SSF48452 239 355 1.87E-9 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Trad_2447 1b9127353418f929a028ac9a10ee8121 358 SMART SM00448 13 127 2.7E-34 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Trad_2447 1b9127353418f929a028ac9a10ee8121 358 SUPERFAMILY SSF46894 146 219 1.29E-6 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Trad_1369 f13bc9043570c880964a047fc79fa50f 261 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 102 122 - T 15-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 Trad_1369 f13bc9043570c880964a047fc79fa50f 261 Gene3D G3DSA:3.90.226.10 3 202 1.4E-63 T 15-10-2018 Trad_1369 f13bc9043570c880964a047fc79fa50f 261 Pfam PF00378 Enoyl-CoA hydratase/isomerase 14 260 2.2E-60 T 15-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 Trad_1369 f13bc9043570c880964a047fc79fa50f 261 SUPERFAMILY SSF52096 4 261 2.01E-79 T 15-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Trad_1369 f13bc9043570c880964a047fc79fa50f 261 Gene3D G3DSA:1.10.12.10 204 261 2.4E-22 T 15-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal Trad_2467 518154ccbe4b7bd010aae667fde10cc2 278 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 276 4.8E-13 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Trad_2467 518154ccbe4b7bd010aae667fde10cc2 278 SUPERFAMILY SSF161098 30 278 1.31E-55 T 15-10-2018 IPR035906 MetI-like superfamily Trad_2467 518154ccbe4b7bd010aae667fde10cc2 278 Gene3D G3DSA:1.10.3720.10 29 278 1.2E-51 T 15-10-2018 IPR035906 MetI-like superfamily Trad_1998 59de98ae4d50d03372ffe2ecc70a2e83 488 PIRSF PIRSF005522 1 475 2.7E-221 T 15-10-2018 IPR016450 Uncharacterised conserved protein UCP005522 Trad_1998 59de98ae4d50d03372ffe2ecc70a2e83 488 Gene3D G3DSA:3.40.50.11290 209 306 4.7E-44 T 15-10-2018 Trad_1998 59de98ae4d50d03372ffe2ecc70a2e83 488 Pfam PF14403 Circularly permuted ATP-grasp type 2 71 448 5.3E-161 T 15-10-2018 IPR025841 Circularly permuted ATP-grasp type 2 Trad_1998 59de98ae4d50d03372ffe2ecc70a2e83 488 Gene3D G3DSA:3.30.1490.270 343 403 3.2E-20 T 15-10-2018 Trad_1998 59de98ae4d50d03372ffe2ecc70a2e83 488 SUPERFAMILY SSF56059 29 463 6.34E-56 T 15-10-2018 Trad_0742 c0415a6bc7af5f3b0138780f3b7108cd 380 TIGRFAM TIGR01800 cit_synth_II: 2-methylcitrate synthase/citrate synthase II 7 380 4.4E-148 T 15-10-2018 IPR011278 2-methylcitrate synthase/citrate synthase type I GO:0005737|GO:0046912 Trad_0742 c0415a6bc7af5f3b0138780f3b7108cd 380 PRINTS PR00143 Citrate synthase signature 126 139 3.4E-40 T 15-10-2018 IPR002020 Citrate synthase GO:0046912 Trad_0742 c0415a6bc7af5f3b0138780f3b7108cd 380 PRINTS PR00143 Citrate synthase signature 197 225 3.4E-40 T 15-10-2018 IPR002020 Citrate synthase GO:0046912 Trad_0742 c0415a6bc7af5f3b0138780f3b7108cd 380 PRINTS PR00143 Citrate synthase signature 175 190 3.4E-40 T 15-10-2018 IPR002020 Citrate synthase GO:0046912 Trad_0742 c0415a6bc7af5f3b0138780f3b7108cd 380 PRINTS PR00143 Citrate synthase signature 333 347 3.4E-40 T 15-10-2018 IPR002020 Citrate synthase GO:0046912 Trad_0742 c0415a6bc7af5f3b0138780f3b7108cd 380 PRINTS PR00143 Citrate synthase signature 251 271 3.4E-40 T 15-10-2018 IPR002020 Citrate synthase GO:0046912 Trad_0742 c0415a6bc7af5f3b0138780f3b7108cd 380 PRINTS PR00143 Citrate synthase signature 313 329 3.4E-40 T 15-10-2018 IPR002020 Citrate synthase GO:0046912 Trad_0742 c0415a6bc7af5f3b0138780f3b7108cd 380 Gene3D G3DSA:1.10.580.10 18 354 1.2E-130 T 15-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 Trad_0742 c0415a6bc7af5f3b0138780f3b7108cd 380 SUPERFAMILY SSF48256 4 380 1.57E-131 T 15-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 Trad_0742 c0415a6bc7af5f3b0138780f3b7108cd 380 ProSitePatterns PS00480 Citrate synthase signature. 258 270 - T 15-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 Trad_0742 c0415a6bc7af5f3b0138780f3b7108cd 380 PIRSF PIRSF001369 1 380 3.0E-142 T 15-10-2018 IPR024176 Citrate synthase, bacterial-type Trad_0742 c0415a6bc7af5f3b0138780f3b7108cd 380 Pfam PF00285 Citrate synthase, C-terminal domain 8 363 5.4E-134 T 15-10-2018 IPR002020 Citrate synthase GO:0046912 Trad_0742 c0415a6bc7af5f3b0138780f3b7108cd 380 Gene3D G3DSA:1.10.230.10 224 330 1.2E-130 T 15-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain Trad_0130 066b3513e23e3046419584c2a99548f1 414 Gene3D G3DSA:3.40.640.10 40 291 1.5E-181 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Trad_0130 066b3513e23e3046419584c2a99548f1 414 Gene3D G3DSA:3.90.1150.10 14 393 1.5E-181 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Trad_0130 066b3513e23e3046419584c2a99548f1 414 PIRSF PIRSF000412 2 410 4.5E-166 T 15-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 Trad_0130 066b3513e23e3046419584c2a99548f1 414 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 10 414 52.051 T 15-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 Trad_0130 066b3513e23e3046419584c2a99548f1 414 SUPERFAMILY SSF53383 11 414 2.89E-175 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Trad_0130 066b3513e23e3046419584c2a99548f1 414 Pfam PF00464 Serine hydroxymethyltransferase 13 388 2.7E-170 T 15-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 Trad_0130 066b3513e23e3046419584c2a99548f1 414 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 225 241 - T 15-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 Trad_0312 b2f2aee9ab040c4ad8f04c74b46d4471 259 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 181 256 1.8E-16 T 15-10-2018 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00540+2.3.1.129 Trad_0312 b2f2aee9ab040c4ad8f04c74b46d4471 259 Gene3D G3DSA:2.160.10.10 7 197 4.7E-45 T 15-10-2018 Trad_0312 b2f2aee9ab040c4ad8f04c74b46d4471 259 SUPERFAMILY SSF51161 10 255 1.28E-59 T 15-10-2018 IPR011004 Trimeric LpxA-like superfamily Trad_0312 b2f2aee9ab040c4ad8f04c74b46d4471 259 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 20 52 5.9E-7 T 15-10-2018 IPR001451 Hexapeptide repeat Trad_0312 b2f2aee9ab040c4ad8f04c74b46d4471 259 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 110 138 1.7E-5 T 15-10-2018 IPR001451 Hexapeptide repeat Trad_0312 b2f2aee9ab040c4ad8f04c74b46d4471 259 Gene3D G3DSA:1.20.1180.10 198 256 6.5E-7 T 15-10-2018 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily KEGG: 00540+2.3.1.129 Trad_0312 b2f2aee9ab040c4ad8f04c74b46d4471 259 PIRSF PIRSF000456 7 259 2.8E-72 T 15-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 Trad_2880 c23d82514f2312cae9da16601a68144c 329 SUPERFAMILY SSF47413 11 66 2.06E-15 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Trad_2880 c23d82514f2312cae9da16601a68144c 329 SMART SM00354 11 82 1.4E-20 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Trad_2880 c23d82514f2312cae9da16601a68144c 329 Gene3D G3DSA:3.40.50.2300 85 314 1.3E-49 T 15-10-2018 Trad_2880 c23d82514f2312cae9da16601a68144c 329 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 2.3E-6 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Trad_2880 c23d82514f2312cae9da16601a68144c 329 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 23 33 2.3E-6 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Trad_2880 c23d82514f2312cae9da16601a68144c 329 Pfam PF13377 Periplasmic binding protein-like domain 171 325 1.3E-30 T 15-10-2018 Trad_2880 c23d82514f2312cae9da16601a68144c 329 SUPERFAMILY SSF53822 83 326 4.32E-49 T 15-10-2018 IPR028082 Periplasmic binding protein-like I Trad_2880 c23d82514f2312cae9da16601a68144c 329 Pfam PF00356 Bacterial regulatory proteins, lacI family 13 58 1.3E-16 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Trad_2880 c23d82514f2312cae9da16601a68144c 329 ProSitePatterns PS00356 LacI-type HTH domain signature. 14 32 - T 15-10-2018 Trad_2880 c23d82514f2312cae9da16601a68144c 329 Gene3D G3DSA:3.40.50.2300 162 287 1.3E-49 T 15-10-2018 Trad_2880 c23d82514f2312cae9da16601a68144c 329 Gene3D G3DSA:1.10.260.40 3 68 3.0E-21 T 15-10-2018 Trad_2758 48bbe4066722c78bce970a267d1f321d 465 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 9 326 1.1E-57 T 15-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Trad_2758 48bbe4066722c78bce970a267d1f321d 465 Gene3D G3DSA:3.50.50.100 3 400 8.8E-117 T 15-10-2018 Trad_2758 48bbe4066722c78bce970a267d1f321d 465 SUPERFAMILY SSF51905 8 340 8.64E-37 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Trad_2758 48bbe4066722c78bce970a267d1f321d 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 9 31 3.8E-8 T 15-10-2018 Trad_2758 48bbe4066722c78bce970a267d1f321d 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 298 305 3.8E-8 T 15-10-2018 Trad_2758 48bbe4066722c78bce970a267d1f321d 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 161 186 3.8E-8 T 15-10-2018 Trad_2758 48bbe4066722c78bce970a267d1f321d 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 10 29 2.5E-11 T 15-10-2018 Trad_2758 48bbe4066722c78bce970a267d1f321d 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 2.5E-11 T 15-10-2018 Trad_2758 48bbe4066722c78bce970a267d1f321d 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 161 179 2.5E-11 T 15-10-2018 Trad_2017 51c5da9128a59efd57a18695bad5dd08 472 SUPERFAMILY SSF47917 368 421 9.94E-8 T 15-10-2018 Trad_2017 51c5da9128a59efd57a18695bad5dd08 472 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 136 354 2.4E-67 T 15-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Trad_2017 51c5da9128a59efd57a18695bad5dd08 472 Gene3D G3DSA:3.40.50.12240 4 459 2.1E-178 T 15-10-2018 Trad_2017 51c5da9128a59efd57a18695bad5dd08 472 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 345 354 - T 15-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Trad_2017 51c5da9128a59efd57a18695bad5dd08 472 SUPERFAMILY SSF52540 84 359 8.5E-84 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_2017 51c5da9128a59efd57a18695bad5dd08 472 PIRSF PIRSF039114 1 467 4.2E-232 T 15-10-2018 IPR022879 V-type ATP synthase regulatory subunit B/beta Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 Trad_2017 51c5da9128a59efd57a18695bad5dd08 472 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 14 70 8.2E-7 T 15-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Trad_2017 51c5da9128a59efd57a18695bad5dd08 472 Hamap MF_00310 V-type ATP synthase beta chain [atpB]. 7 462 58.597 T 15-10-2018 IPR022879 V-type ATP synthase regulatory subunit B/beta Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 Trad_0371 e1e273c621246b609b04127a8e985638 193 SMART SM00393 113 192 3.5E-15 T 15-10-2018 IPR001374 R3H domain GO:0003676 Trad_0371 e1e273c621246b609b04127a8e985638 193 Pfam PF01424 R3H domain 133 191 6.4E-13 T 15-10-2018 IPR001374 R3H domain GO:0003676 Trad_0371 e1e273c621246b609b04127a8e985638 193 Pfam PF13083 KH domain 64 111 3.8E-11 T 15-10-2018 Trad_0371 e1e273c621246b609b04127a8e985638 193 Gene3D G3DSA:3.30.300.20 43 127 6.7E-16 T 15-10-2018 IPR015946 K homology domain-like, alpha/beta Trad_0371 e1e273c621246b609b04127a8e985638 193 Gene3D G3DSA:3.30.1370.50 128 193 5.3E-23 T 15-10-2018 IPR036867 R3H domain superfamily GO:0003676 Trad_0371 e1e273c621246b609b04127a8e985638 193 SUPERFAMILY SSF82708 145 191 1.16E-8 T 15-10-2018 IPR036867 R3H domain superfamily GO:0003676 Trad_1123 5a43b42ffa3fdaa0cbdf732bfe4cf7e0 144 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 21 137 1.1E-13 T 15-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 Trad_1123 5a43b42ffa3fdaa0cbdf732bfe4cf7e0 144 Gene3D G3DSA:3.10.129.10 4 143 2.0E-39 T 15-10-2018 Trad_1123 5a43b42ffa3fdaa0cbdf732bfe4cf7e0 144 Pfam PF03061 Thioesterase superfamily 58 133 8.1E-10 T 15-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 Trad_1123 5a43b42ffa3fdaa0cbdf732bfe4cf7e0 144 SUPERFAMILY SSF54637 5 140 8.87E-24 T 15-10-2018 IPR029069 HotDog domain superfamily Trad_1529 4869cbf04f469110a2a86e7412cc60df 417 Pfam PF13416 Bacterial extracellular solute-binding protein 47 321 1.7E-31 T 15-10-2018 IPR006059 Bacterial extracellular solute-binding protein Trad_1529 4869cbf04f469110a2a86e7412cc60df 417 SUPERFAMILY SSF53850 25 414 3.16E-65 T 15-10-2018 Trad_1529 4869cbf04f469110a2a86e7412cc60df 417 Gene3D G3DSA:3.40.190.10 48 372 6.1E-72 T 15-10-2018 Trad_1529 4869cbf04f469110a2a86e7412cc60df 417 Gene3D G3DSA:3.40.190.10 139 409 6.1E-72 T 15-10-2018 Trad_0912 a2fd60bbf3e1c93c3e1a790dbbed6b62 522 SUPERFAMILY SSF48557 4 493 1.02E-184 T 15-10-2018 IPR008948 L-Aspartase-like GO:0003824 Trad_0912 a2fd60bbf3e1c93c3e1a790dbbed6b62 522 Hamap MF_00229 Histidine ammonia-lyase [hutH]. 1 498 44.264 T 15-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Trad_0912 a2fd60bbf3e1c93c3e1a790dbbed6b62 522 Pfam PF00221 Aromatic amino acid lyase 7 465 3.7E-190 T 15-10-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 Trad_0912 a2fd60bbf3e1c93c3e1a790dbbed6b62 522 Gene3D G3DSA:1.10.275.10 1 193 9.0E-68 T 15-10-2018 IPR024083 Fumarase/histidase, N-terminal Trad_0912 a2fd60bbf3e1c93c3e1a790dbbed6b62 522 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 135 151 - T 15-10-2018 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 Reactome: R-HSA-70921 Trad_0912 a2fd60bbf3e1c93c3e1a790dbbed6b62 522 Gene3D G3DSA:1.20.200.10 194 499 1.2E-114 T 15-10-2018 Trad_0912 a2fd60bbf3e1c93c3e1a790dbbed6b62 522 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 1 495 1.7E-212 T 15-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Trad_2250 cf3f01087239bcb1a7e49f34b36841e3 336 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 15-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Trad_2250 cf3f01087239bcb1a7e49f34b36841e3 336 SUPERFAMILY SSF51735 6 239 5.35E-62 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_2250 cf3f01087239bcb1a7e49f34b36841e3 336 Pfam PF00106 short chain dehydrogenase 9 198 2.5E-49 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2250 cf3f01087239bcb1a7e49f34b36841e3 336 Gene3D G3DSA:3.40.50.720 1 267 2.4E-68 T 15-10-2018 Trad_2250 cf3f01087239bcb1a7e49f34b36841e3 336 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 2.6E-22 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2250 cf3f01087239bcb1a7e49f34b36841e3 336 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 2.6E-22 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2250 cf3f01087239bcb1a7e49f34b36841e3 336 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 2.6E-22 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2250 cf3f01087239bcb1a7e49f34b36841e3 336 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 2.6E-22 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2250 cf3f01087239bcb1a7e49f34b36841e3 336 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 2.6E-22 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2250 cf3f01087239bcb1a7e49f34b36841e3 336 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 9 194 2.6E-4 T 15-10-2018 Trad_2250 cf3f01087239bcb1a7e49f34b36841e3 336 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 6.2E-9 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2250 cf3f01087239bcb1a7e49f34b36841e3 336 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 6.2E-9 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2250 cf3f01087239bcb1a7e49f34b36841e3 336 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 6.2E-9 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_0485 f25f3e602b9c0d883ad84109f543f022 1027 Gene3D G3DSA:1.10.1030.10 401 546 2.7E-39 T 15-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Trad_0485 f25f3e602b9c0d883ad84109f543f022 1027 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 832 839 - T 15-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Trad_0485 f25f3e602b9c0d883ad84109f543f022 1027 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 666 869 1.3E-32 T 15-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Trad_0485 f25f3e602b9c0d883ad84109f543f022 1027 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 334 6.7E-71 T 15-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Trad_0485 f25f3e602b9c0d883ad84109f543f022 1027 SMART SM01096 417 540 2.5E-53 T 15-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Trad_0485 f25f3e602b9c0d883ad84109f543f022 1027 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 702 716 - T 15-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Trad_0485 f25f3e602b9c0d883ad84109f543f022 1027 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 15-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Trad_0485 f25f3e602b9c0d883ad84109f543f022 1027 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 423 540 1.9E-35 T 15-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Trad_0485 f25f3e602b9c0d883ad84109f543f022 1027 SUPERFAMILY SSF56059 128 400 1.77E-108 T 15-10-2018 Trad_0485 f25f3e602b9c0d883ad84109f543f022 1027 SUPERFAMILY SSF56059 666 927 1.77E-88 T 15-10-2018 Trad_0485 f25f3e602b9c0d883ad84109f543f022 1027 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 957 0.0 T 15-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Trad_0485 f25f3e602b9c0d883ad84109f543f022 1027 SUPERFAMILY SSF52440 1 127 8.63E-47 T 15-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Trad_0485 f25f3e602b9c0d883ad84109f543f022 1027 Gene3D G3DSA:3.40.50.20 1 116 7.9E-48 T 15-10-2018 Trad_0485 f25f3e602b9c0d883ad84109f543f022 1027 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 1.7E-66 T 15-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Trad_0485 f25f3e602b9c0d883ad84109f543f022 1027 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 1.7E-66 T 15-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Trad_0485 f25f3e602b9c0d883ad84109f543f022 1027 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 1.7E-66 T 15-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Trad_0485 f25f3e602b9c0d883ad84109f543f022 1027 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 379 397 1.7E-66 T 15-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Trad_0485 f25f3e602b9c0d883ad84109f543f022 1027 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 1.7E-66 T 15-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Trad_0485 f25f3e602b9c0d883ad84109f543f022 1027 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 1.7E-66 T 15-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Trad_0485 f25f3e602b9c0d883ad84109f543f022 1027 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 1.7E-66 T 15-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Trad_0485 f25f3e602b9c0d883ad84109f543f022 1027 SUPERFAMILY SSF52440 550 668 1.87E-48 T 15-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Trad_0485 f25f3e602b9c0d883ad84109f543f022 1027 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1015 12.464 T 15-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Trad_0485 f25f3e602b9c0d883ad84109f543f022 1027 SUPERFAMILY SSF48108 395 547 3.92E-44 T 15-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Trad_0485 f25f3e602b9c0d883ad84109f543f022 1027 Gene3D G3DSA:3.30.470.20 658 929 3.1E-97 T 15-10-2018 Trad_0485 f25f3e602b9c0d883ad84109f543f022 1027 Gene3D G3DSA:3.30.470.20 120 400 8.2E-126 T 15-10-2018 Trad_0485 f25f3e602b9c0d883ad84109f543f022 1027 Gene3D G3DSA:3.40.50.20 547 655 7.8E-49 T 15-10-2018 Trad_1599 9a5e01f6f7116e9ca9a94b6f72d33be2 339 Pfam PF01795 MraW methylase family 8 290 9.7E-96 T 15-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 Trad_1599 9a5e01f6f7116e9ca9a94b6f72d33be2 339 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 9 290 1.8E-88 T 15-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 Trad_1599 9a5e01f6f7116e9ca9a94b6f72d33be2 339 Gene3D G3DSA:3.40.50.150 10 289 1.1E-105 T 15-10-2018 Trad_1599 9a5e01f6f7116e9ca9a94b6f72d33be2 339 PIRSF PIRSF004486 6 292 2.0E-100 T 15-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 Trad_1599 9a5e01f6f7116e9ca9a94b6f72d33be2 339 SUPERFAMILY SSF53335 9 291 3.44E-47 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Trad_1599 9a5e01f6f7116e9ca9a94b6f72d33be2 339 Gene3D G3DSA:1.10.150.170 113 214 1.1E-105 T 15-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 Trad_1599 9a5e01f6f7116e9ca9a94b6f72d33be2 339 SUPERFAMILY SSF81799 115 213 2.49E-35 T 15-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 Trad_1599 9a5e01f6f7116e9ca9a94b6f72d33be2 339 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 10 291 37.941 T 15-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 Trad_2736 14259483593d7cafbf59176e683f2046 388 PIRSF PIRSF001549 1 367 6.4E-59 T 15-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Trad_2736 14259483593d7cafbf59176e683f2046 388 SUPERFAMILY SSF55681 4 311 5.84E-51 T 15-10-2018 Trad_2736 14259483593d7cafbf59176e683f2046 388 Gene3D G3DSA:3.30.930.10 1 309 3.2E-61 T 15-10-2018 Trad_2736 14259483593d7cafbf59176e683f2046 388 Pfam PF13393 Histidyl-tRNA synthetase 9 304 8.9E-64 T 15-10-2018 Trad_2736 14259483593d7cafbf59176e683f2046 388 Hamap MF_00125 ATP phosphoribosyltransferase regulatory subunit [hisZ]. 15 351 24.657 T 15-10-2018 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 Trad_0578 cacc3dd821ae429b5ffcbf1190c838dc 303 ProSitePatterns PS00211 ABC transporters family signature. 129 143 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Trad_0578 cacc3dd821ae429b5ffcbf1190c838dc 303 Pfam PF00005 ABC transporter 20 157 7.1E-29 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Trad_0578 cacc3dd821ae429b5ffcbf1190c838dc 303 Gene3D G3DSA:3.40.50.300 1 240 3.2E-61 T 15-10-2018 Trad_0578 cacc3dd821ae429b5ffcbf1190c838dc 303 SUPERFAMILY SSF52540 4 219 2.09E-60 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_0578 cacc3dd821ae429b5ffcbf1190c838dc 303 SMART SM00382 28 205 1.0E-16 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_0168 ba698e79d4dd35769dcc1a96d5d29f86 352 Pfam PF02463 RecF/RecN/SMC N terminal domain 8 319 2.7E-13 T 15-10-2018 IPR003395 RecF/RecN/SMC, N-terminal Trad_0168 ba698e79d4dd35769dcc1a96d5d29f86 352 ProSitePatterns PS00618 RecF protein signature 2. 296 314 - T 15-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 Trad_0168 ba698e79d4dd35769dcc1a96d5d29f86 352 Gene3D G3DSA:3.40.50.300 9 330 1.1E-90 T 15-10-2018 Trad_0168 ba698e79d4dd35769dcc1a96d5d29f86 352 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 3 329 6.1E-74 T 15-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 Trad_0168 ba698e79d4dd35769dcc1a96d5d29f86 352 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 352 68.208 T 15-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 Trad_0168 ba698e79d4dd35769dcc1a96d5d29f86 352 ProSitePatterns PS00617 RecF protein signature 1. 114 134 - T 15-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 Trad_0168 ba698e79d4dd35769dcc1a96d5d29f86 352 Gene3D G3DSA:1.20.1050.90 117 295 1.1E-90 T 15-10-2018 Trad_0168 ba698e79d4dd35769dcc1a96d5d29f86 352 SUPERFAMILY SSF52540 2 317 8.35E-35 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_2355 df7676f9e187b189422c08a130c72cdc 370 ProSitePatterns PS00636 Nt-dnaJ domain signature. 45 64 - T 15-10-2018 IPR018253 DnaJ domain, conserved site Trad_2355 df7676f9e187b189422c08a130c72cdc 370 Pfam PF00684 DnaJ central domain 136 201 7.4E-11 T 15-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 Trad_2355 df7676f9e187b189422c08a130c72cdc 370 SUPERFAMILY SSF49493 253 338 9.81E-24 T 15-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 Trad_2355 df7676f9e187b189422c08a130c72cdc 370 Gene3D G3DSA:2.10.230.10 136 201 6.7E-29 T 15-10-2018 Trad_2355 df7676f9e187b189422c08a130c72cdc 370 SUPERFAMILY SSF46565 2 98 7.72E-35 T 15-10-2018 IPR036869 Chaperone J-domain superfamily Trad_2355 df7676f9e187b189422c08a130c72cdc 370 Gene3D G3DSA:2.60.260.20 106 243 6.7E-29 T 15-10-2018 Trad_2355 df7676f9e187b189422c08a130c72cdc 370 SUPERFAMILY SSF49493 103 260 5.36E-19 T 15-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 Trad_2355 df7676f9e187b189422c08a130c72cdc 370 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 1 362 36.805 T 15-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 Trad_2355 df7676f9e187b189422c08a130c72cdc 370 Gene3D G3DSA:1.10.287.110 1 101 2.1E-34 T 15-10-2018 IPR036869 Chaperone J-domain superfamily Trad_2355 df7676f9e187b189422c08a130c72cdc 370 SUPERFAMILY SSF57938 123 203 3.01E-13 T 15-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily Trad_2355 df7676f9e187b189422c08a130c72cdc 370 Pfam PF00226 DnaJ domain 3 65 1.2E-29 T 15-10-2018 IPR001623 DnaJ domain Trad_2355 df7676f9e187b189422c08a130c72cdc 370 Pfam PF01556 DnaJ C terminal domain 109 327 6.2E-36 T 15-10-2018 IPR002939 Chaperone DnaJ, C-terminal Trad_2355 df7676f9e187b189422c08a130c72cdc 370 PRINTS PR00625 DnaJ domain signature 40 60 9.8E-27 T 15-10-2018 IPR001623 DnaJ domain Trad_2355 df7676f9e187b189422c08a130c72cdc 370 PRINTS PR00625 DnaJ domain signature 60 79 9.8E-27 T 15-10-2018 IPR001623 DnaJ domain Trad_2355 df7676f9e187b189422c08a130c72cdc 370 PRINTS PR00625 DnaJ domain signature 23 38 9.8E-27 T 15-10-2018 IPR001623 DnaJ domain Trad_2355 df7676f9e187b189422c08a130c72cdc 370 PRINTS PR00625 DnaJ domain signature 5 23 9.8E-27 T 15-10-2018 IPR001623 DnaJ domain Trad_2355 df7676f9e187b189422c08a130c72cdc 370 Gene3D G3DSA:2.60.260.20 248 353 2.5E-30 T 15-10-2018 Trad_2355 df7676f9e187b189422c08a130c72cdc 370 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 3 343 7.5E-117 T 15-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 Trad_2355 df7676f9e187b189422c08a130c72cdc 370 SMART SM00271 2 60 6.8E-33 T 15-10-2018 IPR001623 DnaJ domain Trad_2370 a2d21109980e94a96e1731215b8371f6 315 Gene3D G3DSA:3.30.230.10 19 170 3.5E-78 T 15-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Trad_2370 a2d21109980e94a96e1731215b8371f6 315 SUPERFAMILY SSF55060 176 273 2.84E-24 T 15-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily Trad_2370 a2d21109980e94a96e1731215b8371f6 315 Pfam PF00288 GHMP kinases N terminal domain 91 151 2.8E-11 T 15-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 Trad_2370 a2d21109980e94a96e1731215b8371f6 315 TIGRFAM TIGR00191 thrB: homoserine kinase 18 272 1.8E-68 T 15-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 Trad_2370 a2d21109980e94a96e1731215b8371f6 315 Gene3D G3DSA:3.30.70.890 171 272 3.5E-78 T 15-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily Trad_2370 a2d21109980e94a96e1731215b8371f6 315 PIRSF PIRSF000676 14 310 3.6E-76 T 15-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 Trad_2370 a2d21109980e94a96e1731215b8371f6 315 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 97 108 - T 15-10-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 Trad_2370 a2d21109980e94a96e1731215b8371f6 315 Hamap MF_00384 Homoserine kinase [thrB]. 19 312 27.552 T 15-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 Trad_2370 a2d21109980e94a96e1731215b8371f6 315 PRINTS PR00958 Homoserine kinase signature 138 151 2.9E-36 T 15-10-2018 Trad_2370 a2d21109980e94a96e1731215b8371f6 315 PRINTS PR00958 Homoserine kinase signature 178 195 2.9E-36 T 15-10-2018 Trad_2370 a2d21109980e94a96e1731215b8371f6 315 PRINTS PR00958 Homoserine kinase signature 257 272 2.9E-36 T 15-10-2018 Trad_2370 a2d21109980e94a96e1731215b8371f6 315 PRINTS PR00958 Homoserine kinase signature 24 39 2.9E-36 T 15-10-2018 Trad_2370 a2d21109980e94a96e1731215b8371f6 315 PRINTS PR00958 Homoserine kinase signature 104 119 2.9E-36 T 15-10-2018 Trad_2370 a2d21109980e94a96e1731215b8371f6 315 Pfam PF08544 GHMP kinases C terminal 232 273 8.9E-5 T 15-10-2018 IPR013750 GHMP kinase, C-terminal domain Trad_2370 a2d21109980e94a96e1731215b8371f6 315 SUPERFAMILY SSF54211 18 159 4.63E-26 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Trad_2595 4f0336145cb8c2d262d7e729c89f95aa 348 Gene3D G3DSA:3.40.190.90 149 310 2.1E-128 T 15-10-2018 Trad_2595 4f0336145cb8c2d262d7e729c89f95aa 348 TIGRFAM TIGR00330 glpX: fructose-1,6-bisphosphatase, class II 26 346 9.7E-107 T 15-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 Trad_2595 4f0336145cb8c2d262d7e729c89f95aa 348 Pfam PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded 28 336 1.9E-132 T 15-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 Trad_2595 4f0336145cb8c2d262d7e729c89f95aa 348 SUPERFAMILY SSF56655 26 338 6.87E-99 T 15-10-2018 Trad_2595 4f0336145cb8c2d262d7e729c89f95aa 348 PIRSF PIRSF004532 26 347 4.4E-130 T 15-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 Trad_2595 4f0336145cb8c2d262d7e729c89f95aa 348 Gene3D G3DSA:3.30.540.10 32 336 2.1E-128 T 15-10-2018 Trad_0898 9e6acbb7dfc8d9121ae82c7d4d675e28 452 Gene3D G3DSA:4.10.320.10 149 195 1.2E-12 T 15-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 Trad_0898 9e6acbb7dfc8d9121ae82c7d4d675e28 452 Pfam PF00364 Biotin-requiring enzyme 4 76 5.5E-21 T 15-10-2018 IPR000089 Biotin/lipoyl attachment Trad_0898 9e6acbb7dfc8d9121ae82c7d4d675e28 452 Gene3D G3DSA:3.30.559.10 219 452 7.6E-91 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 Trad_0898 9e6acbb7dfc8d9121ae82c7d4d675e28 452 SUPERFAMILY SSF52777 212 450 3.83E-84 T 15-10-2018 Trad_0898 9e6acbb7dfc8d9121ae82c7d4d675e28 452 SUPERFAMILY SSF47005 149 187 1.7E-9 T 15-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 Trad_0898 9e6acbb7dfc8d9121ae82c7d4d675e28 452 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 3 452 3.3E-156 T 15-10-2018 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|Reactome: R-HSA-389661|Reactome: R-HSA-71064|Reactome: R-HSA-71403 Trad_0898 9e6acbb7dfc8d9121ae82c7d4d675e28 452 Gene3D G3DSA:2.40.50.100 2 102 1.2E-24 T 15-10-2018 Trad_0898 9e6acbb7dfc8d9121ae82c7d4d675e28 452 Pfam PF02817 e3 binding domain 150 183 1.8E-10 T 15-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 Trad_0898 9e6acbb7dfc8d9121ae82c7d4d675e28 452 SUPERFAMILY SSF51230 1 96 2.36E-26 T 15-10-2018 IPR011053 Single hybrid motif Trad_0898 9e6acbb7dfc8d9121ae82c7d4d675e28 452 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 221 450 1.0E-78 T 15-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 Trad_0898 9e6acbb7dfc8d9121ae82c7d4d675e28 452 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 15-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 Trad_0200 54ab8420d6228257861796b6198f9554 301 SUPERFAMILY SSF56281 6 234 2.03E-42 T 15-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Trad_0200 54ab8420d6228257861796b6198f9554 301 ProSitePatterns PS00743 Beta-lactamases class B signature 1. 62 82 - T 15-10-2018 IPR001018 Beta-lactamase, class-B, conserved site GO:0008270|GO:0008800|GO:0017001 Trad_0200 54ab8420d6228257861796b6198f9554 301 Gene3D G3DSA:3.60.15.10 5 232 4.0E-38 T 15-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Trad_0200 54ab8420d6228257861796b6198f9554 301 Pfam PF00753 Metallo-beta-lactamase superfamily 17 209 2.9E-20 T 15-10-2018 IPR001279 Metallo-beta-lactamase Trad_0200 54ab8420d6228257861796b6198f9554 301 SMART SM00849 19 209 1.6E-27 T 15-10-2018 IPR001279 Metallo-beta-lactamase Trad_2775 6b59699c05571147e2154cb897d110ce 290 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 182 210 - T 15-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Trad_2775 6b59699c05571147e2154cb897d110ce 290 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 195 214 1.4E-10 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2775 6b59699c05571147e2154cb897d110ce 290 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 175 183 1.4E-10 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2775 6b59699c05571147e2154cb897d110ce 290 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 123 134 1.4E-10 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2775 6b59699c05571147e2154cb897d110ce 290 SUPERFAMILY SSF51735 46 285 9.86E-85 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_2775 6b59699c05571147e2154cb897d110ce 290 Gene3D G3DSA:3.40.50.720 3 287 1.7E-93 T 15-10-2018 Trad_2775 6b59699c05571147e2154cb897d110ce 290 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 123 134 1.7E-38 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2775 6b59699c05571147e2154cb897d110ce 290 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 195 214 1.7E-38 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2775 6b59699c05571147e2154cb897d110ce 290 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 233 1.7E-38 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2775 6b59699c05571147e2154cb897d110ce 290 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 185 1.7E-38 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2775 6b59699c05571147e2154cb897d110ce 290 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 250 270 1.7E-38 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2775 6b59699c05571147e2154cb897d110ce 290 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 48 65 1.7E-38 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2775 6b59699c05571147e2154cb897d110ce 290 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 56 285 1.1E-61 T 15-10-2018 Trad_2775 6b59699c05571147e2154cb897d110ce 290 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 47 232 1.2E-4 T 15-10-2018 Trad_2591 1697b83811fe46e07a2b2a9bcf4c718c 705 Gene3D G3DSA:2.40.50.140 469 550 3.2E-24 T 15-10-2018 Trad_2591 1697b83811fe46e07a2b2a9bcf4c718c 705 Gene3D G3DSA:2.40.50.140 382 466 9.6E-31 T 15-10-2018 Trad_2591 1697b83811fe46e07a2b2a9bcf4c718c 705 Gene3D G3DSA:2.40.50.140 297 380 8.8E-28 T 15-10-2018 Trad_2591 1697b83811fe46e07a2b2a9bcf4c718c 705 SMART SM00316 125 198 1.1E-7 T 15-10-2018 IPR022967 RNA-binding domain, S1 Trad_2591 1697b83811fe46e07a2b2a9bcf4c718c 705 SMART SM00316 214 281 1.7E-4 T 15-10-2018 IPR022967 RNA-binding domain, S1 Trad_2591 1697b83811fe46e07a2b2a9bcf4c718c 705 SMART SM00316 300 370 4.0E-26 T 15-10-2018 IPR022967 RNA-binding domain, S1 Trad_2591 1697b83811fe46e07a2b2a9bcf4c718c 705 SMART SM00316 385 457 3.1E-26 T 15-10-2018 IPR022967 RNA-binding domain, S1 Trad_2591 1697b83811fe46e07a2b2a9bcf4c718c 705 SMART SM00316 472 543 3.2E-23 T 15-10-2018 IPR022967 RNA-binding domain, S1 Trad_2591 1697b83811fe46e07a2b2a9bcf4c718c 705 SUPERFAMILY SSF50249 299 385 3.36E-25 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold Trad_2591 1697b83811fe46e07a2b2a9bcf4c718c 705 SUPERFAMILY SSF50249 370 462 8.95E-25 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold Trad_2591 1697b83811fe46e07a2b2a9bcf4c718c 705 Pfam PF00575 S1 RNA binding domain 473 543 7.0E-16 T 15-10-2018 IPR003029 S1 domain GO:0003676 Trad_2591 1697b83811fe46e07a2b2a9bcf4c718c 705 Pfam PF00575 S1 RNA binding domain 219 281 2.6E-8 T 15-10-2018 IPR003029 S1 domain GO:0003676 Trad_2591 1697b83811fe46e07a2b2a9bcf4c718c 705 Pfam PF00575 S1 RNA binding domain 298 370 1.8E-20 T 15-10-2018 IPR003029 S1 domain GO:0003676 Trad_2591 1697b83811fe46e07a2b2a9bcf4c718c 705 Pfam PF00575 S1 RNA binding domain 386 457 2.9E-20 T 15-10-2018 IPR003029 S1 domain GO:0003676 Trad_2591 1697b83811fe46e07a2b2a9bcf4c718c 705 Pfam PF00575 S1 RNA binding domain 127 198 6.8E-6 T 15-10-2018 IPR003029 S1 domain GO:0003676 Trad_2591 1697b83811fe46e07a2b2a9bcf4c718c 705 Gene3D G3DSA:2.40.50.140 211 287 5.3E-6 T 15-10-2018 Trad_2591 1697b83811fe46e07a2b2a9bcf4c718c 705 Gene3D G3DSA:2.40.50.140 113 210 4.8E-17 T 15-10-2018 Trad_2591 1697b83811fe46e07a2b2a9bcf4c718c 705 PRINTS PR00681 Ribosomal protein S1 signature 236 253 5.3E-61 T 15-10-2018 Trad_2591 1697b83811fe46e07a2b2a9bcf4c718c 705 PRINTS PR00681 Ribosomal protein S1 signature 195 214 5.3E-61 T 15-10-2018 Trad_2591 1697b83811fe46e07a2b2a9bcf4c718c 705 PRINTS PR00681 Ribosomal protein S1 signature 400 419 5.3E-61 T 15-10-2018 Trad_2591 1697b83811fe46e07a2b2a9bcf4c718c 705 PRINTS PR00681 Ribosomal protein S1 signature 145 159 5.3E-61 T 15-10-2018 Trad_2591 1697b83811fe46e07a2b2a9bcf4c718c 705 PRINTS PR00681 Ribosomal protein S1 signature 265 285 5.3E-61 T 15-10-2018 Trad_2591 1697b83811fe46e07a2b2a9bcf4c718c 705 PRINTS PR00681 Ribosomal protein S1 signature 127 145 5.3E-61 T 15-10-2018 Trad_2591 1697b83811fe46e07a2b2a9bcf4c718c 705 PRINTS PR00681 Ribosomal protein S1 signature 219 235 5.3E-61 T 15-10-2018 Trad_2591 1697b83811fe46e07a2b2a9bcf4c718c 705 PRINTS PR00681 Ribosomal protein S1 signature 322 343 5.3E-61 T 15-10-2018 Trad_2591 1697b83811fe46e07a2b2a9bcf4c718c 705 PRINTS PR00681 Ribosomal protein S1 signature 440 458 5.3E-61 T 15-10-2018 Trad_2591 1697b83811fe46e07a2b2a9bcf4c718c 705 SUPERFAMILY SSF50249 452 549 7.08E-23 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold Trad_2591 1697b83811fe46e07a2b2a9bcf4c718c 705 SUPERFAMILY SSF50249 203 281 7.31E-11 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold Trad_2591 1697b83811fe46e07a2b2a9bcf4c718c 705 SUPERFAMILY SSF50249 118 223 1.79E-16 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold Trad_1944 a2f42f88f51b3b1d8d57cb00541099bc 333 SUPERFAMILY SSF55347 130 299 3.05E-17 T 15-10-2018 Trad_1944 a2f42f88f51b3b1d8d57cb00541099bc 333 SUPERFAMILY SSF51735 3 157 1.35E-40 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_1944 a2f42f88f51b3b1d8d57cb00541099bc 333 Gene3D G3DSA:3.30.360.10 132 329 1.6E-63 T 15-10-2018 Trad_1944 a2f42f88f51b3b1d8d57cb00541099bc 333 Gene3D G3DSA:3.40.50.720 9 310 1.6E-63 T 15-10-2018 Trad_1944 a2f42f88f51b3b1d8d57cb00541099bc 333 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 8 122 1.4E-21 T 15-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 Trad_2316 671c5efe9d7ae2128d15960eb632c46a 1106 SUPERFAMILY SSF47323 696 942 2.99E-58 T 15-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Trad_2316 671c5efe9d7ae2128d15960eb632c46a 1106 Gene3D G3DSA:3.90.740.10 196 423 1.2E-203 T 15-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Trad_2316 671c5efe9d7ae2128d15960eb632c46a 1106 SUPERFAMILY SSF50677 200 419 6.8E-30 T 15-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Trad_2316 671c5efe9d7ae2128d15960eb632c46a 1106 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 6 890 7.2E-259 T 15-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 Trad_2316 671c5efe9d7ae2128d15960eb632c46a 1106 Hamap MF_02003 Isoleucine--tRNA ligase [ileS]. 3 1097 12.939 T 15-10-2018 IPR023586 Isoleucine-tRNA ligase, type 2 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Trad_2316 671c5efe9d7ae2128d15960eb632c46a 1106 Gene3D G3DSA:3.40.50.620 14 670 1.2E-203 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Trad_2316 671c5efe9d7ae2128d15960eb632c46a 1106 Pfam PF08264 Anticodon-binding domain of tRNA 730 882 3.6E-34 T 15-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 Trad_2316 671c5efe9d7ae2128d15960eb632c46a 1106 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 18 676 6.2E-142 T 15-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Trad_2316 671c5efe9d7ae2128d15960eb632c46a 1106 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 40 51 2.5E-15 T 15-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 Trad_2316 671c5efe9d7ae2128d15960eb632c46a 1106 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 541 554 2.5E-15 T 15-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 Trad_2316 671c5efe9d7ae2128d15960eb632c46a 1106 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 417 432 2.5E-15 T 15-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 Trad_2316 671c5efe9d7ae2128d15960eb632c46a 1106 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 234 257 2.5E-15 T 15-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 Trad_2316 671c5efe9d7ae2128d15960eb632c46a 1106 Gene3D G3DSA:1.10.730.10 685 874 8.6E-61 T 15-10-2018 Trad_2316 671c5efe9d7ae2128d15960eb632c46a 1106 SUPERFAMILY SSF52374 6 692 5.09E-113 T 15-10-2018 Trad_0041 a72ab863766059622ff27031bae8cf8e 190 Hamap MF_00839 Ribosome hibernation promoting factor [hpf]. 2 188 23.768 T 15-10-2018 IPR034694 Ribosome hibernation promoting factor, long/plastid Trad_0041 a72ab863766059622ff27031bae8cf8e 190 Gene3D G3DSA:3.30.160.100 1 104 1.4E-33 T 15-10-2018 IPR036567 Ribosome hibernation promotion factor-like Trad_0041 a72ab863766059622ff27031bae8cf8e 190 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 5 98 8.5E-27 T 15-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 Trad_0041 a72ab863766059622ff27031bae8cf8e 190 Gene3D G3DSA:3.30.505.50 142 188 5.0E-24 T 15-10-2018 IPR038416 Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain superfamily Trad_0041 a72ab863766059622ff27031bae8cf8e 190 Pfam PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus 129 184 2.7E-27 T 15-10-2018 IPR032528 Sigma 54 modulation/S30EA ribosomal protein, C-terminal Trad_0041 a72ab863766059622ff27031bae8cf8e 190 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 5 103 1.6E-27 T 15-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 Trad_0041 a72ab863766059622ff27031bae8cf8e 190 SUPERFAMILY SSF69754 5 106 3.79E-29 T 15-10-2018 IPR036567 Ribosome hibernation promotion factor-like Trad_2379 d01423e90cb2070d4cc2a8aadd160958 226 SUPERFAMILY SSF52540 1 221 1.25E-64 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_2379 d01423e90cb2070d4cc2a8aadd160958 226 Pfam PF00005 ABC transporter 19 165 1.5E-34 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Trad_2379 d01423e90cb2070d4cc2a8aadd160958 226 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Trad_2379 d01423e90cb2070d4cc2a8aadd160958 226 Gene3D G3DSA:3.40.50.300 1 223 1.9E-67 T 15-10-2018 Trad_2379 d01423e90cb2070d4cc2a8aadd160958 226 SMART SM00382 28 222 9.5E-15 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_2379 d01423e90cb2070d4cc2a8aadd160958 226 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 1 214 7.9E-80 T 15-10-2018 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 Trad_1732 64b8bd6bfc1502a2b56414723bd87a7e 252 SUPERFAMILY SSF56529 43 250 1.7E-76 T 15-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 Trad_1732 64b8bd6bfc1502a2b56414723bd87a7e 252 Gene3D G3DSA:3.90.850.10 30 252 1.8E-82 T 15-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 Trad_1732 64b8bd6bfc1502a2b56414723bd87a7e 252 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 51 248 1.7E-65 T 15-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 Trad_0570 61c84ff13b8b884fe74ba772043f0352 263 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 233 254 1.8E-9 T 15-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal Trad_0570 61c84ff13b8b884fe74ba772043f0352 263 Pfam PF00005 ABC transporter 22 183 2.1E-28 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Trad_0570 61c84ff13b8b884fe74ba772043f0352 263 SMART SM00382 31 231 1.2E-11 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_0570 61c84ff13b8b884fe74ba772043f0352 263 SUPERFAMILY SSF52540 5 254 6.27E-60 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_0570 61c84ff13b8b884fe74ba772043f0352 263 Gene3D G3DSA:3.40.50.300 2 260 7.8E-58 T 15-10-2018 Trad_2449 f4ec352e362f74834afcb4780f52b72b 106 SUPERFAMILY SSF82697 14 90 3.84E-19 T 15-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Trad_2449 f4ec352e362f74834afcb4780f52b72b 106 Gene3D G3DSA:3.30.1280.10 13 95 1.8E-24 T 15-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Trad_2449 f4ec352e362f74834afcb4780f52b72b 106 Hamap MF_01926 Phosphoribosylformylglycinamidine synthase subunit PurS [purS]. 14 90 18.479 T 15-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 Trad_2449 f4ec352e362f74834afcb4780f52b72b 106 TIGRFAM TIGR00302 TIGR00302: phosphoribosylformylglycinamidine synthase, purS protein 14 91 8.3E-19 T 15-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 Trad_2449 f4ec352e362f74834afcb4780f52b72b 106 ProDom PD010362 PHOSPHORIBOSYLFORMYLGLYCINAMIDINE PURS SYNTHETASE SYNTHASE COMPONENT SYNTHASE LIGASE FGAM UPF0062 I 22 92 9.0E-16 T 15-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 Trad_2449 f4ec352e362f74834afcb4780f52b72b 106 Pfam PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase 16 89 4.3E-23 T 15-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 Trad_2233 599299ebed48a918b8479e709c404e03 262 Gene3D G3DSA:3.40.50.1980 127 254 2.1E-21 T 15-10-2018 Trad_2233 599299ebed48a918b8479e709c404e03 262 SUPERFAMILY SSF53807 4 250 4.58E-51 T 15-10-2018 Trad_2233 599299ebed48a918b8479e709c404e03 262 Gene3D G3DSA:3.40.50.1980 1 123 4.3E-29 T 15-10-2018 Trad_2233 599299ebed48a918b8479e709c404e03 262 Pfam PF01497 Periplasmic binding protein 5 230 1.1E-31 T 15-10-2018 IPR002491 ABC transporter periplasmic binding domain Trad_0047 d21e21f6af759b2655e823ab99303c23 1106 Gene3D G3DSA:3.40.50.300 644 1001 1.6E-122 T 15-10-2018 Trad_0047 d21e21f6af759b2655e823ab99303c23 1106 TIGRFAM TIGR01443 intein_Cterm: intein C-terminal splicing region 594 616 2.6E-5 T 15-10-2018 IPR030934 Intein C-terminal splicing region Trad_0047 d21e21f6af759b2655e823ab99303c23 1106 SUPERFAMILY SSF52540 657 1068 2.75E-97 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_0047 d21e21f6af759b2655e823ab99303c23 1106 Gene3D G3DSA:1.10.10.160 115 201 1.3E-88 T 15-10-2018 IPR013986 DExx box DNA helicase domain superfamily Trad_0047 d21e21f6af759b2655e823ab99303c23 1106 SUPERFAMILY SSF52540 10 268 5.51E-70 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_0047 d21e21f6af759b2655e823ab99303c23 1106 SUPERFAMILY SSF52540 616 674 7.08E-11 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_0047 d21e21f6af759b2655e823ab99303c23 1106 Pfam PF13361 UvrD-like helicase C-terminal domain 641 983 2.6E-64 T 15-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 Trad_0047 d21e21f6af759b2655e823ab99303c23 1106 Gene3D G3DSA:3.40.50.300 14 264 1.3E-88 T 15-10-2018 Trad_0047 d21e21f6af759b2655e823ab99303c23 1106 SUPERFAMILY SSF51294 264 615 1.07E-14 T 15-10-2018 IPR036844 Hint domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 Trad_0047 d21e21f6af759b2655e823ab99303c23 1106 Gene3D G3DSA:2.170.16.10 549 616 9.4E-12 T 15-10-2018 Trad_0047 d21e21f6af759b2655e823ab99303c23 1106 Pfam PF00580 UvrD/REP helicase N-terminal domain 14 264 6.3E-63 T 15-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 Trad_0047 d21e21f6af759b2655e823ab99303c23 1106 Gene3D G3DSA:1.10.486.10 747 913 1.6E-122 T 15-10-2018 Trad_0047 d21e21f6af759b2655e823ab99303c23 1106 SMART SM00305 575 621 4.8E-8 T 15-10-2018 IPR003586 Hint domain C-terminal Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 Trad_2155 70712dbbca8ef9f58cf8780b18f08c67 234 ProSitePatterns PS00221 MIP family signature. 53 61 - T 15-10-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 Trad_2155 70712dbbca8ef9f58cf8780b18f08c67 234 PRINTS PR00783 Major intrinsic protein family signature 72 91 2.5E-42 T 15-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Trad_2155 70712dbbca8ef9f58cf8780b18f08c67 234 PRINTS PR00783 Major intrinsic protein family signature 35 59 2.5E-42 T 15-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Trad_2155 70712dbbca8ef9f58cf8780b18f08c67 234 PRINTS PR00783 Major intrinsic protein family signature 150 172 2.5E-42 T 15-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Trad_2155 70712dbbca8ef9f58cf8780b18f08c67 234 PRINTS PR00783 Major intrinsic protein family signature 2 21 2.5E-42 T 15-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Trad_2155 70712dbbca8ef9f58cf8780b18f08c67 234 PRINTS PR00783 Major intrinsic protein family signature 187 207 2.5E-42 T 15-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Trad_2155 70712dbbca8ef9f58cf8780b18f08c67 234 PRINTS PR00783 Major intrinsic protein family signature 122 140 2.5E-42 T 15-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Trad_2155 70712dbbca8ef9f58cf8780b18f08c67 234 Pfam PF00230 Major intrinsic protein 2 202 9.9E-48 T 15-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Trad_2155 70712dbbca8ef9f58cf8780b18f08c67 234 Gene3D G3DSA:1.20.1080.10 1 219 9.9E-63 T 15-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 Trad_2155 70712dbbca8ef9f58cf8780b18f08c67 234 SUPERFAMILY SSF81338 2 213 1.05E-56 T 15-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 Trad_0653 65151c7eb0d51bf320468e5b2811869b 147 Gene3D G3DSA:2.30.30.240 24 113 3.1E-21 T 15-10-2018 Trad_0653 65151c7eb0d51bf320468e5b2811869b 147 SUPERFAMILY SSF50346 3 144 1.2E-22 T 15-10-2018 IPR011033 PRC-barrel-like superfamily Trad_0653 65151c7eb0d51bf320468e5b2811869b 147 Pfam PF05239 PRC-barrel domain 36 105 1.8E-13 T 15-10-2018 IPR027275 PRC-barrel domain Trad_0497 9964411643baa20413e1a4216dc61516 422 SUPERFAMILY SSF117281 165 405 4.05E-63 T 15-10-2018 IPR015915 Kelch-type beta propeller GO:0005515 Trad_0497 9964411643baa20413e1a4216dc61516 422 Gene3D G3DSA:2.60.40.10 37 129 1.3E-21 T 15-10-2018 IPR013783 Immunoglobulin-like fold Trad_0497 9964411643baa20413e1a4216dc61516 422 Gene3D G3DSA:2.120.10.80 204 412 4.8E-60 T 15-10-2018 IPR015915 Kelch-type beta propeller GO:0005515 Trad_0497 9964411643baa20413e1a4216dc61516 422 SMART SM00612 246 292 3.2E-7 T 15-10-2018 IPR006652 Kelch repeat type 1 GO:0005515 Trad_0497 9964411643baa20413e1a4216dc61516 422 SMART SM00612 196 245 7.3E-8 T 15-10-2018 IPR006652 Kelch repeat type 1 GO:0005515 Trad_0497 9964411643baa20413e1a4216dc61516 422 SMART SM00612 293 342 0.022 T 15-10-2018 IPR006652 Kelch repeat type 1 GO:0005515 Trad_0497 9964411643baa20413e1a4216dc61516 422 SMART SM00612 155 195 4.8 T 15-10-2018 IPR006652 Kelch repeat type 1 GO:0005515 Trad_0497 9964411643baa20413e1a4216dc61516 422 SMART SM00612 343 389 4.3E-11 T 15-10-2018 IPR006652 Kelch repeat type 1 GO:0005515 Trad_0497 9964411643baa20413e1a4216dc61516 422 Pfam PF01344 Kelch motif 237 279 7.8E-8 T 15-10-2018 IPR006652 Kelch repeat type 1 GO:0005515 Trad_0497 9964411643baa20413e1a4216dc61516 422 Pfam PF01344 Kelch motif 281 324 2.4E-4 T 15-10-2018 IPR006652 Kelch repeat type 1 GO:0005515 Trad_0497 9964411643baa20413e1a4216dc61516 422 Pfam PF01344 Kelch motif 332 376 2.6E-13 T 15-10-2018 IPR006652 Kelch repeat type 1 GO:0005515 Trad_0497 9964411643baa20413e1a4216dc61516 422 Pfam PF01344 Kelch motif 191 232 1.6E-7 T 15-10-2018 IPR006652 Kelch repeat type 1 GO:0005515 Trad_0497 9964411643baa20413e1a4216dc61516 422 SUPERFAMILY SSF49299 36 125 4.9E-7 T 15-10-2018 IPR035986 PKD domain superfamily Trad_1553 4f0f5fb5945a6281ffd50abf33173fe6 475 Gene3D G3DSA:3.60.20.10 14 455 4.8E-144 T 15-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Trad_1553 4f0f5fb5945a6281ffd50abf33173fe6 475 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 13 454 42.73 T 15-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 Trad_1553 4f0f5fb5945a6281ffd50abf33173fe6 475 Gene3D G3DSA:3.40.50.2020 276 439 4.8E-144 T 15-10-2018 Trad_1553 4f0f5fb5945a6281ffd50abf33173fe6 475 PIRSF PIRSF000485 10 466 1.9E-156 T 15-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 Trad_1553 4f0f5fb5945a6281ffd50abf33173fe6 475 SUPERFAMILY SSF53271 251 461 5.64E-63 T 15-10-2018 IPR029057 Phosphoribosyltransferase-like Trad_1553 4f0f5fb5945a6281ffd50abf33173fe6 475 SUPERFAMILY SSF56235 14 258 2.49E-62 T 15-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Trad_1553 4f0f5fb5945a6281ffd50abf33173fe6 475 Pfam PF00156 Phosphoribosyl transferase domain 286 388 6.7E-10 T 15-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 Trad_1553 4f0f5fb5945a6281ffd50abf33173fe6 475 Pfam PF13522 Glutamine amidotransferase domain 81 211 4.8E-21 T 15-10-2018 Trad_1553 4f0f5fb5945a6281ffd50abf33173fe6 475 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 14 454 2.5E-146 T 15-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 Trad_1684 ce6e00f9ba5af1a4e689ac155db6373e 486 Pfam PF00361 Proton-conducting membrane transporter 133 427 6.7E-54 T 15-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Trad_1684 ce6e00f9ba5af1a4e689ac155db6373e 486 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 384 410 2.3E-14 T 15-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Trad_1684 ce6e00f9ba5af1a4e689ac155db6373e 486 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 169 193 2.3E-14 T 15-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Trad_1684 ce6e00f9ba5af1a4e689ac155db6373e 486 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 238 262 2.3E-14 T 15-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Trad_1684 ce6e00f9ba5af1a4e689ac155db6373e 486 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 332 351 2.3E-14 T 15-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Trad_1684 ce6e00f9ba5af1a4e689ac155db6373e 486 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 75 107 4.6E-6 T 15-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Trad_1296 09c6f6635d64eab6cedab511782696aa 377 SUPERFAMILY SSF51338 42 376 9.72E-7 T 15-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Trad_1296 09c6f6635d64eab6cedab511782696aa 377 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 39 367 3.1E-71 T 15-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 Trad_1296 09c6f6635d64eab6cedab511782696aa 377 Gene3D G3DSA:3.20.20.140 52 342 9.7E-105 T 15-10-2018 Trad_1296 09c6f6635d64eab6cedab511782696aa 377 Pfam PF01979 Amidohydrolase family 48 376 7.3E-19 T 15-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Trad_1296 09c6f6635d64eab6cedab511782696aa 377 PIRSF PIRSF038994 27 377 5.5E-93 T 15-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 Trad_1296 09c6f6635d64eab6cedab511782696aa 377 Gene3D G3DSA:2.30.40.10 40 373 9.7E-105 T 15-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Trad_1296 09c6f6635d64eab6cedab511782696aa 377 SUPERFAMILY SSF51556 51 346 3.97E-83 T 15-10-2018 IPR032466 Metal-dependent hydrolase Trad_2145 52196bdbb45760c78d1db42fecb88db4 417 SUPERFAMILY SSF53300 228 397 4.79E-14 T 15-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Trad_2145 52196bdbb45760c78d1db42fecb88db4 417 Pfam PF13519 von Willebrand factor type A domain 228 326 1.0E-6 T 15-10-2018 IPR002035 von Willebrand factor, type A Trad_2145 52196bdbb45760c78d1db42fecb88db4 417 Gene3D G3DSA:3.40.50.410 224 402 8.6E-14 T 15-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Trad_0734 14f8ddc825bb34c24aeca35d3e0c0ca1 407 Pfam PF13579 Glycosyl transferase 4-like domain 19 191 3.6E-28 T 15-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Trad_0734 14f8ddc825bb34c24aeca35d3e0c0ca1 407 Gene3D G3DSA:3.40.50.2000 209 382 5.1E-24 T 15-10-2018 Trad_0734 14f8ddc825bb34c24aeca35d3e0c0ca1 407 Gene3D G3DSA:3.40.50.2000 18 208 1.7E-27 T 15-10-2018 Trad_0734 14f8ddc825bb34c24aeca35d3e0c0ca1 407 SUPERFAMILY SSF53756 2 399 3.14E-58 T 15-10-2018 Trad_0734 14f8ddc825bb34c24aeca35d3e0c0ca1 407 Pfam PF13692 Glycosyl transferases group 1 218 366 5.8E-12 T 15-10-2018 Trad_2959 2a6466d3ac63372454098482d53794ef 154 Gene3D G3DSA:3.10.50.30 79 150 7.5E-17 T 15-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 Trad_2959 2a6466d3ac63372454098482d53794ef 154 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 82 153 1.5E-17 T 15-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 Trad_2959 2a6466d3ac63372454098482d53794ef 154 Pfam PF03449 Transcription elongation factor, N-terminal 5 74 4.0E-15 T 15-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 Trad_2959 2a6466d3ac63372454098482d53794ef 154 Gene3D G3DSA:1.10.287.180 1 77 2.0E-23 T 15-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 Trad_2959 2a6466d3ac63372454098482d53794ef 154 SUPERFAMILY SSF54534 83 153 8.24E-13 T 15-10-2018 Trad_2959 2a6466d3ac63372454098482d53794ef 154 PIRSF PIRSF006092 1 154 5.2E-38 T 15-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 Trad_2959 2a6466d3ac63372454098482d53794ef 154 SUPERFAMILY SSF46557 4 76 5.23E-12 T 15-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 Trad_1108 c66d5b75034b7849aaf2295d2ad3e785 337 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 17 314 2.5E-119 T 15-10-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 Trad_1108 c66d5b75034b7849aaf2295d2ad3e785 337 SUPERFAMILY SSF51905 10 314 1.67E-54 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Trad_1108 c66d5b75034b7849aaf2295d2ad3e785 337 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 145 165 - T 15-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 Trad_1108 c66d5b75034b7849aaf2295d2ad3e785 337 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 157 175 1.9E-40 T 15-10-2018 Trad_1108 c66d5b75034b7849aaf2295d2ad3e785 337 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 115 133 1.9E-40 T 15-10-2018 Trad_1108 c66d5b75034b7849aaf2295d2ad3e785 337 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 241 257 1.9E-40 T 15-10-2018 Trad_1108 c66d5b75034b7849aaf2295d2ad3e785 337 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 18 37 1.9E-40 T 15-10-2018 Trad_1108 c66d5b75034b7849aaf2295d2ad3e785 337 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 267 289 1.9E-40 T 15-10-2018 Trad_1108 c66d5b75034b7849aaf2295d2ad3e785 337 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 71 81 5.5E-73 T 15-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Trad_1108 c66d5b75034b7849aaf2295d2ad3e785 337 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 205 221 5.5E-73 T 15-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Trad_1108 c66d5b75034b7849aaf2295d2ad3e785 337 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 277 295 5.5E-73 T 15-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Trad_1108 c66d5b75034b7849aaf2295d2ad3e785 337 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 17 39 5.5E-73 T 15-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Trad_1108 c66d5b75034b7849aaf2295d2ad3e785 337 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 153 177 5.5E-73 T 15-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Trad_1108 c66d5b75034b7849aaf2295d2ad3e785 337 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 116 124 5.5E-73 T 15-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Trad_1108 c66d5b75034b7849aaf2295d2ad3e785 337 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 50 65 5.5E-73 T 15-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Trad_1108 c66d5b75034b7849aaf2295d2ad3e785 337 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 138 150 5.5E-73 T 15-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Trad_1108 c66d5b75034b7849aaf2295d2ad3e785 337 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 243 264 5.5E-73 T 15-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Trad_1108 c66d5b75034b7849aaf2295d2ad3e785 337 Gene3D G3DSA:3.50.50.60 127 249 3.2E-118 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Trad_1108 c66d5b75034b7849aaf2295d2ad3e785 337 Gene3D G3DSA:3.50.50.60 17 306 3.2E-118 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Trad_1108 c66d5b75034b7849aaf2295d2ad3e785 337 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 17 299 3.2E-48 T 15-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Trad_1094 376facc4cd73ecefea2492978b010fea 569 Gene3D G3DSA:1.10.10.10 377 464 5.1E-7 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Trad_1094 376facc4cd73ecefea2492978b010fea 569 Pfam PF13424 Tetratricopeptide repeat 218 283 3.0E-9 T 15-10-2018 Trad_1094 376facc4cd73ecefea2492978b010fea 569 SMART SM00028 218 251 3.1E-4 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Trad_1094 376facc4cd73ecefea2492978b010fea 569 SUPERFAMILY SSF48452 211 303 2.66E-10 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Trad_2318 7c38edc2f157c72d9868570f71d10346 330 PIRSF PIRSF000149 1 329 6.0E-123 T 15-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Trad_2318 7c38edc2f157c72d9868570f71d10346 330 SUPERFAMILY SSF51735 1 165 1.09E-58 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_2318 7c38edc2f157c72d9868570f71d10346 330 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 143 161 3.3E-34 T 15-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Trad_2318 7c38edc2f157c72d9868570f71d10346 330 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 226 243 3.3E-34 T 15-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Trad_2318 7c38edc2f157c72d9868570f71d10346 330 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 266 281 3.3E-34 T 15-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Trad_2318 7c38edc2f157c72d9868570f71d10346 330 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 106 119 3.3E-34 T 15-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Trad_2318 7c38edc2f157c72d9868570f71d10346 330 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 170 186 3.3E-34 T 15-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Trad_2318 7c38edc2f157c72d9868570f71d10346 330 Gene3D G3DSA:3.30.360.10 148 311 2.9E-149 T 15-10-2018 Trad_2318 7c38edc2f157c72d9868570f71d10346 330 SUPERFAMILY SSF55347 149 310 2.14E-65 T 15-10-2018 Trad_2318 7c38edc2f157c72d9868570f71d10346 330 SMART SM00846 1 149 3.3E-79 T 15-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Trad_2318 7c38edc2f157c72d9868570f71d10346 330 Gene3D G3DSA:3.40.50.720 3 322 2.9E-149 T 15-10-2018 Trad_2318 7c38edc2f157c72d9868570f71d10346 330 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 154 309 2.0E-62 T 15-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Trad_2318 7c38edc2f157c72d9868570f71d10346 330 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 147 154 - T 15-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Trad_2318 7c38edc2f157c72d9868570f71d10346 330 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 1 99 5.9E-35 T 15-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Trad_2318 7c38edc2f157c72d9868570f71d10346 330 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 2 321 3.0E-128 T 15-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Trad_1349 cfc757ca9d6e43ab6f165f75158fa8b3 388 PIRSF PIRSF000524 6 386 2.8E-114 T 15-10-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661|Reactome: R-HSA-9033241 Trad_1349 cfc757ca9d6e43ab6f165f75158fa8b3 388 Gene3D G3DSA:3.90.1150.10 11 368 1.0E-126 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Trad_1349 cfc757ca9d6e43ab6f165f75158fa8b3 388 Gene3D G3DSA:3.40.640.10 21 270 1.0E-126 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Trad_1349 cfc757ca9d6e43ab6f165f75158fa8b3 388 Pfam PF00266 Aminotransferase class-V 32 337 4.1E-36 T 15-10-2018 IPR000192 Aminotransferase class V domain Trad_1349 cfc757ca9d6e43ab6f165f75158fa8b3 388 SUPERFAMILY SSF53383 7 371 1.12E-93 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Trad_2266 32e3b3c9bcf14faca108b28bb93c0589 398 Pfam PF01546 Peptidase family M20/M25/M40 83 391 3.1E-32 T 15-10-2018 IPR002933 Peptidase M20 GO:0016787 Trad_2266 32e3b3c9bcf14faca108b28bb93c0589 398 SUPERFAMILY SSF53187 12 397 6.0E-86 T 15-10-2018 Trad_2266 32e3b3c9bcf14faca108b28bb93c0589 398 Gene3D G3DSA:3.30.70.360 191 305 1.7E-139 T 15-10-2018 Trad_2266 32e3b3c9bcf14faca108b28bb93c0589 398 Pfam PF07687 Peptidase dimerisation domain 195 286 5.7E-10 T 15-10-2018 IPR011650 Peptidase M20, dimerisation domain Trad_2266 32e3b3c9bcf14faca108b28bb93c0589 398 Gene3D G3DSA:3.40.630.10 24 382 1.7E-139 T 15-10-2018 Trad_2266 32e3b3c9bcf14faca108b28bb93c0589 398 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 25 385 1.5E-113 T 15-10-2018 IPR017439 Amidohydrolase GO:0016787 Trad_2266 32e3b3c9bcf14faca108b28bb93c0589 398 PIRSF PIRSF005962 9 398 1.9E-133 T 15-10-2018 IPR017439 Amidohydrolase GO:0016787 Trad_2266 32e3b3c9bcf14faca108b28bb93c0589 398 SUPERFAMILY SSF55031 195 300 5.76E-29 T 15-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain Trad_2130 e335f6bcd5e99a410e14dc654c3ae9de 188 SUPERFAMILY SSF50891 38 185 6.43E-58 T 15-10-2018 IPR029000 Cyclophilin-like domain superfamily Trad_2130 e335f6bcd5e99a410e14dc654c3ae9de 188 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 72 89 - T 15-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 Trad_2130 e335f6bcd5e99a410e14dc654c3ae9de 188 Gene3D G3DSA:2.40.100.10 18 184 2.0E-60 T 15-10-2018 IPR029000 Cyclophilin-like domain superfamily Trad_2130 e335f6bcd5e99a410e14dc654c3ae9de 188 PIRSF PIRSF001467 21 186 9.0E-56 T 15-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 Trad_2130 e335f6bcd5e99a410e14dc654c3ae9de 188 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 145 160 2.1E-32 T 15-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Trad_2130 e335f6bcd5e99a410e14dc654c3ae9de 188 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 117 132 2.1E-32 T 15-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Trad_2130 e335f6bcd5e99a410e14dc654c3ae9de 188 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 51 66 2.1E-32 T 15-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Trad_2130 e335f6bcd5e99a410e14dc654c3ae9de 188 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 132 144 2.1E-32 T 15-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Trad_2130 e335f6bcd5e99a410e14dc654c3ae9de 188 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 77 89 2.1E-32 T 15-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Trad_2130 e335f6bcd5e99a410e14dc654c3ae9de 188 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 39 180 5.3E-48 T 15-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Trad_1435 b87e7d967eac943a687cae26d31b91cf 241 Pfam PF00849 RNA pseudouridylate synthase 64 192 2.4E-14 T 15-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 Trad_1435 b87e7d967eac943a687cae26d31b91cf 241 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 67 222 1.0E-45 T 15-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 Trad_1435 b87e7d967eac943a687cae26d31b91cf 241 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 102 116 - T 15-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 Trad_1435 b87e7d967eac943a687cae26d31b91cf 241 SMART SM00363 3 63 5.0E-15 T 15-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Trad_1435 b87e7d967eac943a687cae26d31b91cf 241 Gene3D G3DSA:3.30.70.580 65 219 2.1E-49 T 15-10-2018 Trad_1435 b87e7d967eac943a687cae26d31b91cf 241 Gene3D G3DSA:3.10.290.10 1 57 4.0E-21 T 15-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Trad_1435 b87e7d967eac943a687cae26d31b91cf 241 SUPERFAMILY SSF55120 63 226 1.73E-37 T 15-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Trad_1435 b87e7d967eac943a687cae26d31b91cf 241 SUPERFAMILY SSF55174 3 92 2.69E-18 T 15-10-2018 Trad_1435 b87e7d967eac943a687cae26d31b91cf 241 Gene3D G3DSA:3.30.70.1560 126 211 2.1E-49 T 15-10-2018 Trad_1435 b87e7d967eac943a687cae26d31b91cf 241 Pfam PF01479 S4 domain 3 48 6.1E-14 T 15-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Trad_1381 718b043f2f0c25d728712e8b4a9d35f8 505 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 23 500 83.407 T 15-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 Trad_1381 718b043f2f0c25d728712e8b4a9d35f8 505 Gene3D G3DSA:3.20.20.70 14 500 2.3E-210 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Trad_1381 718b043f2f0c25d728712e8b4a9d35f8 505 SMART SM01240 22 487 0.0 T 15-10-2018 Trad_1381 718b043f2f0c25d728712e8b4a9d35f8 505 Pfam PF00571 CBS domain 164 219 6.2E-9 T 15-10-2018 IPR000644 CBS domain Trad_1381 718b043f2f0c25d728712e8b4a9d35f8 505 Pfam PF00571 CBS domain 108 155 4.5E-11 T 15-10-2018 IPR000644 CBS domain Trad_1381 718b043f2f0c25d728712e8b4a9d35f8 505 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 23 468 2.0E-183 T 15-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 Trad_1381 718b043f2f0c25d728712e8b4a9d35f8 505 SUPERFAMILY SSF51412 18 491 5.63E-120 T 15-10-2018 Trad_1381 718b043f2f0c25d728712e8b4a9d35f8 505 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 308 320 - T 15-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 Trad_1381 718b043f2f0c25d728712e8b4a9d35f8 505 SUPERFAMILY SSF54631 108 218 6.19E-31 T 15-10-2018 Trad_1381 718b043f2f0c25d728712e8b4a9d35f8 505 PIRSF PIRSF000130 14 502 1.6E-199 T 15-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 Trad_1381 718b043f2f0c25d728712e8b4a9d35f8 505 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 23 487 4.2E-156 T 15-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 Trad_1381 718b043f2f0c25d728712e8b4a9d35f8 505 SMART SM00116 172 220 3.2E-8 T 15-10-2018 IPR000644 CBS domain Trad_1381 718b043f2f0c25d728712e8b4a9d35f8 505 SMART SM00116 111 159 2.7E-11 T 15-10-2018 IPR000644 CBS domain Trad_2439 eee78f1ebc7d838e893206f453907aaf 374 Hamap MF_01201 Alanine racemase. 5 368 31.959 T 15-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Trad_2439 eee78f1ebc7d838e893206f453907aaf 374 SMART SM01005 242 368 3.2E-62 T 15-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Trad_2439 eee78f1ebc7d838e893206f453907aaf 374 SUPERFAMILY SSF51419 12 243 1.29E-61 T 15-10-2018 IPR029066 PLP-binding barrel Trad_2439 eee78f1ebc7d838e893206f453907aaf 374 Pfam PF01168 Alanine racemase, N-terminal domain 12 227 2.1E-59 T 15-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Trad_2439 eee78f1ebc7d838e893206f453907aaf 374 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 34 44 - T 15-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Trad_2439 eee78f1ebc7d838e893206f453907aaf 374 TIGRFAM TIGR00492 alr: alanine racemase 10 369 4.5E-93 T 15-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Trad_2439 eee78f1ebc7d838e893206f453907aaf 374 Gene3D G3DSA:3.20.20.10 14 232 1.6E-118 T 15-10-2018 IPR029066 PLP-binding barrel Trad_2439 eee78f1ebc7d838e893206f453907aaf 374 Gene3D G3DSA:2.40.37.10 12 367 1.6E-118 T 15-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Trad_2439 eee78f1ebc7d838e893206f453907aaf 374 PRINTS PR00992 Alanine racemase signature 201 228 3.3E-54 T 15-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Trad_2439 eee78f1ebc7d838e893206f453907aaf 374 PRINTS PR00992 Alanine racemase signature 350 363 3.3E-54 T 15-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Trad_2439 eee78f1ebc7d838e893206f453907aaf 374 PRINTS PR00992 Alanine racemase signature 158 169 3.3E-54 T 15-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Trad_2439 eee78f1ebc7d838e893206f453907aaf 374 PRINTS PR00992 Alanine racemase signature 124 136 3.3E-54 T 15-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Trad_2439 eee78f1ebc7d838e893206f453907aaf 374 PRINTS PR00992 Alanine racemase signature 298 315 3.3E-54 T 15-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Trad_2439 eee78f1ebc7d838e893206f453907aaf 374 PRINTS PR00992 Alanine racemase signature 65 83 3.3E-54 T 15-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Trad_2439 eee78f1ebc7d838e893206f453907aaf 374 PRINTS PR00992 Alanine racemase signature 258 273 3.3E-54 T 15-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Trad_2439 eee78f1ebc7d838e893206f453907aaf 374 PRINTS PR00992 Alanine racemase signature 29 45 3.3E-54 T 15-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Trad_2439 eee78f1ebc7d838e893206f453907aaf 374 Pfam PF00842 Alanine racemase, C-terminal domain 242 367 2.2E-43 T 15-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Trad_2439 eee78f1ebc7d838e893206f453907aaf 374 SUPERFAMILY SSF50621 237 369 1.46E-44 T 15-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Trad_1720 0ece719356fa84a508d1661711470ce1 297 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 18 69 4.5E-8 T 15-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain Trad_1720 0ece719356fa84a508d1661711470ce1 297 SUPERFAMILY SSF161098 88 279 8.37E-29 T 15-10-2018 IPR035906 MetI-like superfamily Trad_1720 0ece719356fa84a508d1661711470ce1 297 Gene3D G3DSA:1.10.3720.10 82 296 6.7E-25 T 15-10-2018 IPR035906 MetI-like superfamily Trad_1720 0ece719356fa84a508d1661711470ce1 297 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 111 296 2.2E-33 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Trad_1078 74b2ae50b3e769457c3fc8769c6cedd3 501 SUPERFAMILY SSF53383 25 500 2.62E-113 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Trad_1078 74b2ae50b3e769457c3fc8769c6cedd3 501 Gene3D G3DSA:3.90.1150.10 358 486 3.1E-44 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Trad_1078 74b2ae50b3e769457c3fc8769c6cedd3 501 Hamap MF_00713 Probable glycine dehydrogenase (decarboxylating) subunit 2 [gcvPB]. 25 501 55.579 T 15-10-2018 IPR023012 Probable glycine dehydrogenase (decarboxylating) subunit 2 GO:0004375|GO:0019464 KEGG: 00260+1.4.4.2 Trad_1078 74b2ae50b3e769457c3fc8769c6cedd3 501 Gene3D G3DSA:3.40.640.10 103 331 5.6E-62 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Trad_1078 74b2ae50b3e769457c3fc8769c6cedd3 501 Pfam PF02347 Glycine cleavage system P-protein 67 319 7.1E-10 T 15-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 Trad_2860 d08202f3fc700ac7914e7b4ed54ff3b0 327 TIGRFAM TIGR01472 gmd: GDP-mannose 4,6-dehydratase 3 319 1.4E-132 T 15-10-2018 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|Reactome: R-HSA-6787639 Trad_2860 d08202f3fc700ac7914e7b4ed54ff3b0 327 Pfam PF16363 GDP-mannose 4,6 dehydratase 6 312 3.1E-128 T 15-10-2018 IPR016040 NAD(P)-binding domain Trad_2860 d08202f3fc700ac7914e7b4ed54ff3b0 327 Hamap MF_00955 GDP-mannose 4,6-dehydratase [gmd]. 3 322 53.817 T 15-10-2018 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|Reactome: R-HSA-6787639 Trad_2860 d08202f3fc700ac7914e7b4ed54ff3b0 327 Gene3D G3DSA:3.40.50.720 5 303 1.0E-138 T 15-10-2018 Trad_2860 d08202f3fc700ac7914e7b4ed54ff3b0 327 SUPERFAMILY SSF51735 3 319 2.32E-73 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_2860 d08202f3fc700ac7914e7b4ed54ff3b0 327 Gene3D G3DSA:3.90.25.10 186 317 1.0E-138 T 15-10-2018 Trad_1283 4eea70ddfb2de61c89c852bd83dd2c29 502 SUPERFAMILY SSF48163 312 471 2.09E-40 T 15-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 Trad_1283 4eea70ddfb2de61c89c852bd83dd2c29 502 Gene3D G3DSA:3.40.50.620 1 327 6.1E-138 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Trad_1283 4eea70ddfb2de61c89c852bd83dd2c29 502 SUPERFAMILY SSF52374 2 306 1.39E-105 T 15-10-2018 Trad_1283 4eea70ddfb2de61c89c852bd83dd2c29 502 Gene3D G3DSA:1.10.10.350 375 472 6.1E-26 T 15-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 Trad_1283 4eea70ddfb2de61c89c852bd83dd2c29 502 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 8 19 - T 15-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Trad_1283 4eea70ddfb2de61c89c852bd83dd2c29 502 Gene3D G3DSA:1.10.8.70 328 374 1.7E-24 T 15-10-2018 IPR020752 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 1 GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 Trad_1283 4eea70ddfb2de61c89c852bd83dd2c29 502 PRINTS PR00987 Glutamyl-tRNA synthetase signature 191 201 6.9E-22 T 15-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Trad_1283 4eea70ddfb2de61c89c852bd83dd2c29 502 PRINTS PR00987 Glutamyl-tRNA synthetase signature 207 215 6.9E-22 T 15-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Trad_1283 4eea70ddfb2de61c89c852bd83dd2c29 502 PRINTS PR00987 Glutamyl-tRNA synthetase signature 5 17 6.9E-22 T 15-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Trad_1283 4eea70ddfb2de61c89c852bd83dd2c29 502 PRINTS PR00987 Glutamyl-tRNA synthetase signature 19 30 6.9E-22 T 15-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Trad_1283 4eea70ddfb2de61c89c852bd83dd2c29 502 PRINTS PR00987 Glutamyl-tRNA synthetase signature 34 47 6.9E-22 T 15-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Trad_1283 4eea70ddfb2de61c89c852bd83dd2c29 502 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 2 471 30.856 T 15-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 Trad_1283 4eea70ddfb2de61c89c852bd83dd2c29 502 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 3 468 4.5E-145 T 15-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 Trad_1283 4eea70ddfb2de61c89c852bd83dd2c29 502 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 3 317 1.2E-99 T 15-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 Trad_1401 aae7f7d071114ffb9178fbbe9ebf3f1d 401 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 24 393 5.9E-131 T 15-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 Trad_1401 aae7f7d071114ffb9178fbbe9ebf3f1d 401 PIRSF PIRSF000521 171 396 3.0E-39 T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Trad_1401 aae7f7d071114ffb9178fbbe9ebf3f1d 401 PIRSF PIRSF000521 13 151 3.2E-7 T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Trad_1401 aae7f7d071114ffb9178fbbe9ebf3f1d 401 Pfam PF00202 Aminotransferase class-III 27 392 3.1E-111 T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Trad_1401 aae7f7d071114ffb9178fbbe9ebf3f1d 401 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 222 259 - T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Trad_1401 aae7f7d071114ffb9178fbbe9ebf3f1d 401 Gene3D G3DSA:3.90.1150.10 28 386 2.1E-140 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Trad_1401 aae7f7d071114ffb9178fbbe9ebf3f1d 401 Gene3D G3DSA:3.40.640.10 61 304 2.1E-140 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Trad_1401 aae7f7d071114ffb9178fbbe9ebf3f1d 401 SUPERFAMILY SSF53383 25 394 6.12E-118 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Trad_2469 466375b7fc66d0fe5b978d9dbe43d8cb 378 Gene3D G3DSA:2.40.50.940 236 295 1.0E-11 T 15-10-2018 Trad_2469 466375b7fc66d0fe5b978d9dbe43d8cb 378 Pfam PF00005 ABC transporter 33 175 7.4E-32 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Trad_2469 466375b7fc66d0fe5b978d9dbe43d8cb 378 SUPERFAMILY SSF50331 251 373 6.12E-17 T 15-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal Trad_2469 466375b7fc66d0fe5b978d9dbe43d8cb 378 Gene3D G3DSA:2.40.50.140 296 345 1.0E-11 T 15-10-2018 Trad_2469 466375b7fc66d0fe5b978d9dbe43d8cb 378 Pfam PF08402 TOBE domain 289 373 1.7E-13 T 15-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 Trad_2469 466375b7fc66d0fe5b978d9dbe43d8cb 378 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 48 373 3.8E-114 T 15-10-2018 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 Trad_2469 466375b7fc66d0fe5b978d9dbe43d8cb 378 SUPERFAMILY SSF52540 14 257 1.13E-85 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_2469 466375b7fc66d0fe5b978d9dbe43d8cb 378 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Trad_2469 466375b7fc66d0fe5b978d9dbe43d8cb 378 SMART SM00382 42 225 7.2E-18 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_2469 466375b7fc66d0fe5b978d9dbe43d8cb 378 Gene3D G3DSA:3.40.50.300 13 235 4.3E-66 T 15-10-2018 Trad_2070 a6a50941e713fa4367b14acdf5da0f30 435 SUPERFAMILY SSF55681 103 434 6.43E-81 T 15-10-2018 Trad_2070 a6a50941e713fa4367b14acdf5da0f30 435 Gene3D G3DSA:3.30.930.10 105 424 3.3E-111 T 15-10-2018 Trad_2070 a6a50941e713fa4367b14acdf5da0f30 435 Pfam PF00152 tRNA synthetases class II (D, K and N) 118 428 2.5E-81 T 15-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Trad_2070 a6a50941e713fa4367b14acdf5da0f30 435 Hamap MF_02075 Aspartate--tRNA(Asp) ligase [aspS]. 12 435 39.825 T 15-10-2018 IPR004523 Aspartate-tRNA synthetase, type 2 GO:0000166|GO:0004815|GO:0005524|GO:0005737|GO:0006422 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Trad_2070 a6a50941e713fa4367b14acdf5da0f30 435 PRINTS PR01042 Aspartyl-tRNA synthetase signature 350 366 6.3E-22 T 15-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Trad_2070 a6a50941e713fa4367b14acdf5da0f30 435 PRINTS PR01042 Aspartyl-tRNA synthetase signature 187 199 6.3E-22 T 15-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Trad_2070 a6a50941e713fa4367b14acdf5da0f30 435 PRINTS PR01042 Aspartyl-tRNA synthetase signature 203 216 6.3E-22 T 15-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Trad_2070 a6a50941e713fa4367b14acdf5da0f30 435 PRINTS PR01042 Aspartyl-tRNA synthetase signature 390 404 6.3E-22 T 15-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Trad_2070 a6a50941e713fa4367b14acdf5da0f30 435 SUPERFAMILY SSF50249 17 105 2.67E-23 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold Trad_2070 a6a50941e713fa4367b14acdf5da0f30 435 TIGRFAM TIGR00458 aspS_nondisc: aspartate--tRNA(Asn) ligase 21 435 8.3E-119 T 15-10-2018 IPR004523 Aspartate-tRNA synthetase, type 2 GO:0000166|GO:0004815|GO:0005524|GO:0005737|GO:0006422 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Trad_2070 a6a50941e713fa4367b14acdf5da0f30 435 Pfam PF01336 OB-fold nucleic acid binding domain 28 97 1.8E-12 T 15-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 Trad_2070 a6a50941e713fa4367b14acdf5da0f30 435 Gene3D G3DSA:2.40.50.140 13 104 3.0E-26 T 15-10-2018 Trad_2708 ed6246ee0b30ef78aea91e270a57107c 313 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 19 297 2.2E-47 T 15-10-2018 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD Trad_2708 ed6246ee0b30ef78aea91e270a57107c 313 TIGRFAM TIGR00374 TIGR00374: TIGR00374 family protein 25 301 2.5E-29 T 15-10-2018 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD Trad_1462 8341e511df75f3a2f2a232d7dd118492 433 Pfam PF02875 Mur ligase family, glutamate ligase domain 288 351 8.2E-7 T 15-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Trad_1462 8341e511df75f3a2f2a232d7dd118492 433 Gene3D G3DSA:3.90.190.20 290 423 3.6E-31 T 15-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Trad_1462 8341e511df75f3a2f2a232d7dd118492 433 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 48 71 - T 15-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 Trad_1462 8341e511df75f3a2f2a232d7dd118492 433 Gene3D G3DSA:3.40.1190.10 1 289 4.7E-87 T 15-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Trad_1462 8341e511df75f3a2f2a232d7dd118492 433 SUPERFAMILY SSF53244 288 421 2.75E-26 T 15-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Trad_1462 8341e511df75f3a2f2a232d7dd118492 433 Pfam PF08245 Mur ligase middle domain 50 269 3.4E-15 T 15-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Trad_1462 8341e511df75f3a2f2a232d7dd118492 433 TIGRFAM TIGR01499 folC: bifunctional protein FolC 28 420 3.6E-103 T 15-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 Trad_1462 8341e511df75f3a2f2a232d7dd118492 433 SUPERFAMILY SSF53623 9 288 4.12E-84 T 15-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Trad_1462 8341e511df75f3a2f2a232d7dd118492 433 PIRSF PIRSF001563 1 426 4.6E-118 T 15-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 Trad_1723 1a95067b3bd7e62f7ebc331cb908a572 397 Gene3D G3DSA:1.10.540.10 8 131 2.6E-36 T 15-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 Trad_1723 1a95067b3bd7e62f7ebc331cb908a572 397 Gene3D G3DSA:1.20.140.10 250 396 3.3E-52 T 15-10-2018 Trad_1723 1a95067b3bd7e62f7ebc331cb908a572 397 Gene3D G3DSA:2.40.110.10 132 249 4.5E-36 T 15-10-2018 Trad_1723 1a95067b3bd7e62f7ebc331cb908a572 397 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 351 370 - T 15-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 Trad_1723 1a95067b3bd7e62f7ebc331cb908a572 397 SUPERFAMILY SSF56645 14 257 3.93E-73 T 15-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 Trad_1723 1a95067b3bd7e62f7ebc331cb908a572 397 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 18 129 1.4E-29 T 15-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 Trad_1723 1a95067b3bd7e62f7ebc331cb908a572 397 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 135 147 - T 15-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 Trad_1723 1a95067b3bd7e62f7ebc331cb908a572 397 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 247 392 2.9E-46 T 15-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 Trad_1723 1a95067b3bd7e62f7ebc331cb908a572 397 SUPERFAMILY SSF47203 244 396 3.06E-53 T 15-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 Trad_1723 1a95067b3bd7e62f7ebc331cb908a572 397 PIRSF PIRSF016578 17 377 8.4E-17 T 15-10-2018 Trad_1723 1a95067b3bd7e62f7ebc331cb908a572 397 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 134 231 5.5E-22 T 15-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 Trad_2524 5fa13a2c03381befb7f760b5c633ca46 199 SMART SM00421 125 180 4.5E-15 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Trad_2524 5fa13a2c03381befb7f760b5c633ca46 199 SUPERFAMILY SSF55781 7 126 5.45E-10 T 15-10-2018 Trad_2524 5fa13a2c03381befb7f760b5c633ca46 199 Gene3D G3DSA:1.10.10.10 132 175 5.4E-19 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Trad_2524 5fa13a2c03381befb7f760b5c633ca46 199 Gene3D G3DSA:3.30.450.40 3 131 1.1E-8 T 15-10-2018 IPR029016 GAF-like domain superfamily Trad_2524 5fa13a2c03381befb7f760b5c633ca46 199 ProSitePatterns PS00622 LuxR-type HTH domain signature. 140 167 - T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Trad_2524 5fa13a2c03381befb7f760b5c633ca46 199 SUPERFAMILY SSF46894 129 185 2.55E-16 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Trad_2524 5fa13a2c03381befb7f760b5c633ca46 199 Pfam PF13185 GAF domain 13 122 4.2E-8 T 15-10-2018 IPR003018 GAF domain GO:0005515 Trad_2524 5fa13a2c03381befb7f760b5c633ca46 199 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 126 140 4.9E-10 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Trad_2524 5fa13a2c03381befb7f760b5c633ca46 199 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 140 156 4.9E-10 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Trad_2524 5fa13a2c03381befb7f760b5c633ca46 199 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 156 168 4.9E-10 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Trad_2524 5fa13a2c03381befb7f760b5c633ca46 199 Pfam PF00196 Bacterial regulatory proteins, luxR family 129 180 9.3E-16 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Trad_2029 57fcf9e39d602459b339f9ad3f10f0a4 213 Pfam PF00293 NUDIX domain 46 162 4.9E-17 T 15-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Trad_2029 57fcf9e39d602459b339f9ad3f10f0a4 213 SUPERFAMILY SSF55811 43 200 1.04E-36 T 15-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Trad_2029 57fcf9e39d602459b339f9ad3f10f0a4 213 ProSitePatterns PS00893 Nudix box signature. 84 105 - T 15-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 Trad_2029 57fcf9e39d602459b339f9ad3f10f0a4 213 PRINTS PR00502 NUDIX hydrolase family signature 93 108 2.2E-5 T 15-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Trad_2029 57fcf9e39d602459b339f9ad3f10f0a4 213 PRINTS PR00502 NUDIX hydrolase family signature 79 93 2.2E-5 T 15-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Trad_2029 57fcf9e39d602459b339f9ad3f10f0a4 213 Gene3D G3DSA:3.90.79.10 25 202 1.8E-51 T 15-10-2018 Trad_2406 cdba830a037e2e813c441defef4291c8 117 SMART SM00938 4 105 5.8E-49 T 15-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Trad_2406 cdba830a037e2e813c441defef4291c8 117 Gene3D G3DSA:3.30.70.120 1 116 5.8E-41 T 15-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal Trad_2406 cdba830a037e2e813c441defef4291c8 117 PRINTS PR00340 P-II protein signature 23 41 1.1E-28 T 15-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Trad_2406 cdba830a037e2e813c441defef4291c8 117 PRINTS PR00340 P-II protein signature 2 17 1.1E-28 T 15-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Trad_2406 cdba830a037e2e813c441defef4291c8 117 PRINTS PR00340 P-II protein signature 83 103 1.1E-28 T 15-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Trad_2406 cdba830a037e2e813c441defef4291c8 117 PRINTS PR00340 P-II protein signature 52 75 1.1E-28 T 15-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Trad_2406 cdba830a037e2e813c441defef4291c8 117 SUPERFAMILY SSF54913 1 112 2.26E-38 T 15-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta Trad_2406 cdba830a037e2e813c441defef4291c8 117 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 4.3E-35 T 15-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Trad_2406 cdba830a037e2e813c441defef4291c8 117 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 15-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 Trad_1656 2d47402ec10a3506e075898b8227c3c6 625 SUPERFAMILY SSF52540 344 607 1.17E-10 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_1656 2d47402ec10a3506e075898b8227c3c6 625 Gene3D G3DSA:3.40.50.300 432 609 1.7E-16 T 15-10-2018 Trad_0760 6bd78a1957b57802607d89475b50670e 339 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 11 33 1.4E-15 T 15-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Trad_0760 6bd78a1957b57802607d89475b50670e 339 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 130 138 1.4E-15 T 15-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Trad_0760 6bd78a1957b57802607d89475b50670e 339 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 292 310 1.4E-15 T 15-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Trad_0760 6bd78a1957b57802607d89475b50670e 339 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 165 189 1.4E-15 T 15-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Trad_0760 6bd78a1957b57802607d89475b50670e 339 TIGRFAM TIGR04018 Bthiol_YpdA: putative bacillithiol system oxidoreductase, YpdA family 11 330 6.6E-117 T 15-10-2018 IPR023856 Bacillithiol biosynthesis thiol disulphide oxidoreductase, YpdA Trad_0760 6bd78a1957b57802607d89475b50670e 339 Gene3D G3DSA:3.50.50.60 11 302 7.0E-49 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Trad_0760 6bd78a1957b57802607d89475b50670e 339 SUPERFAMILY SSF51905 11 331 5.92E-41 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Trad_0760 6bd78a1957b57802607d89475b50670e 339 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 14 301 4.3E-75 T 15-10-2018 Trad_0760 6bd78a1957b57802607d89475b50670e 339 Gene3D G3DSA:3.50.50.60 142 259 7.0E-49 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Trad_0760 6bd78a1957b57802607d89475b50670e 339 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 12 31 2.2E-10 T 15-10-2018 Trad_0760 6bd78a1957b57802607d89475b50670e 339 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 169 187 2.2E-10 T 15-10-2018 Trad_0760 6bd78a1957b57802607d89475b50670e 339 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 282 304 2.2E-10 T 15-10-2018 Trad_2502 a80d830d8c703e80440ddb6034e6f616 765 SUPERFAMILY SSF48334 37 278 1.23E-20 T 15-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily Trad_2502 a80d830d8c703e80440ddb6034e6f616 765 SMART SM00463 686 764 2.5E-13 T 15-10-2018 IPR002625 Smr domain Trad_2502 a80d830d8c703e80440ddb6034e6f616 765 SMART SM00534 316 500 9.0E-65 T 15-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 Trad_2502 a80d830d8c703e80440ddb6034e6f616 765 PIRSF PIRSF005814 1 764 3.4E-206 T 15-10-2018 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 Trad_2502 a80d830d8c703e80440ddb6034e6f616 765 SMART SM00533 11 305 2.6E-17 T 15-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 Trad_2502 a80d830d8c703e80440ddb6034e6f616 765 Gene3D G3DSA:3.40.50.300 283 601 2.0E-70 T 15-10-2018 Trad_2502 a80d830d8c703e80440ddb6034e6f616 765 SUPERFAMILY SSF52540 282 500 3.73E-39 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_2502 a80d830d8c703e80440ddb6034e6f616 765 SUPERFAMILY SSF160443 688 764 4.97E-7 T 15-10-2018 IPR036063 Smr domain superfamily Trad_2502 a80d830d8c703e80440ddb6034e6f616 765 Pfam PF00488 MutS domain V 319 499 2.6E-33 T 15-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 Trad_2502 a80d830d8c703e80440ddb6034e6f616 765 Hamap MF_00092 Endonuclease MutS2 [mutS2]. 4 763 18.429 T 15-10-2018 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 Trad_2502 a80d830d8c703e80440ddb6034e6f616 765 Gene3D G3DSA:3.30.1370.110 679 765 1.5E-22 T 15-10-2018 Trad_2502 a80d830d8c703e80440ddb6034e6f616 765 TIGRFAM TIGR01069 mutS2: MutS2 family protein 6 764 6.8E-172 T 15-10-2018 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 Trad_2502 a80d830d8c703e80440ddb6034e6f616 765 Pfam PF01713 Smr domain 689 764 8.9E-17 T 15-10-2018 IPR002625 Smr domain Trad_0232 eac5c5d8dc2bfc680ca5c8230b805a71 267 SMART SM01232 118 210 4.6E-46 T 15-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 Trad_0232 eac5c5d8dc2bfc680ca5c8230b805a71 267 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 257 2.4E-75 T 15-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 Trad_0232 eac5c5d8dc2bfc680ca5c8230b805a71 267 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 118 207 6.9E-26 T 15-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 Trad_0232 eac5c5d8dc2bfc680ca5c8230b805a71 267 Gene3D G3DSA:3.20.190.10 1 117 2.0E-24 T 15-10-2018 IPR035937 MutM-like, N-terminal Trad_0232 eac5c5d8dc2bfc680ca5c8230b805a71 267 SMART SM00898 1 102 2.2E-23 T 15-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 Trad_0232 eac5c5d8dc2bfc680ca5c8230b805a71 267 SUPERFAMILY SSF57716 206 258 1.06E-15 T 15-10-2018 Trad_0232 eac5c5d8dc2bfc680ca5c8230b805a71 267 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 100 4.7E-20 T 15-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 Trad_0232 eac5c5d8dc2bfc680ca5c8230b805a71 267 ProSitePatterns PS01242 Zinc finger FPG-type signature. 233 257 - T 15-10-2018 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 Trad_0232 eac5c5d8dc2bfc680ca5c8230b805a71 267 Gene3D G3DSA:1.10.8.50 120 258 2.6E-46 T 15-10-2018 Trad_0232 eac5c5d8dc2bfc680ca5c8230b805a71 267 SUPERFAMILY SSF81624 1 123 4.45E-24 T 15-10-2018 IPR035937 MutM-like, N-terminal Trad_0232 eac5c5d8dc2bfc680ca5c8230b805a71 267 Pfam PF06827 Zinc finger found in FPG and IleRS 231 257 1.1E-10 T 15-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 Trad_0232 eac5c5d8dc2bfc680ca5c8230b805a71 267 SUPERFAMILY SSF46946 119 210 5.15E-29 T 15-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 Trad_2617 8b5f765d239cb884b47d376e646b6d29 261 SMART SM00518 1 257 0.0046 T 15-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 Trad_2617 8b5f765d239cb884b47d376e646b6d29 261 Pfam PF01261 Xylose isomerase-like TIM barrel 19 219 2.4E-17 T 15-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain Trad_2617 8b5f765d239cb884b47d376e646b6d29 261 SUPERFAMILY SSF51658 1 245 7.2E-37 T 15-10-2018 IPR036237 Xylose isomerase-like superfamily Trad_2617 8b5f765d239cb884b47d376e646b6d29 261 Gene3D G3DSA:3.20.20.150 8 258 1.2E-42 T 15-10-2018 Trad_1803 0c0ee426bc40873b4e4abce1338077bc 149 SUPERFAMILY SSF46785 3 132 1.98E-33 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Trad_1803 0c0ee426bc40873b4e4abce1338077bc 149 Gene3D G3DSA:1.10.10.10 1 138 3.6E-44 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Trad_1803 0c0ee426bc40873b4e4abce1338077bc 149 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 129 3.2E-40 T 15-10-2018 IPR000944 Transcription regulator Rrf2-type Trad_1803 0c0ee426bc40873b4e4abce1338077bc 149 Pfam PF02082 Transcriptional regulator 1 80 7.1E-23 T 15-10-2018 IPR000944 Transcription regulator Rrf2-type Trad_1360 9106b200dc41fd57e887ae1e37574f1f 528 Gene3D G3DSA:2.170.8.10 40 327 2.5E-222 T 15-10-2018 Trad_1360 9106b200dc41fd57e887ae1e37574f1f 528 Hamap MF_00453 Phosphoenolpyruvate carboxykinase (ATP) [pckA]. 13 528 54.486 T 15-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 Trad_1360 9106b200dc41fd57e887ae1e37574f1f 528 PIRSF PIRSF006294 3 528 2.2E-229 T 15-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 Trad_1360 9106b200dc41fd57e887ae1e37574f1f 528 SUPERFAMILY SSF53795 212 527 1.22E-134 T 15-10-2018 Trad_1360 9106b200dc41fd57e887ae1e37574f1f 528 SUPERFAMILY SSF68923 20 210 1.26E-73 T 15-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 Trad_1360 9106b200dc41fd57e887ae1e37574f1f 528 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 12 527 9.3E-214 T 15-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 Trad_1360 9106b200dc41fd57e887ae1e37574f1f 528 Gene3D G3DSA:3.40.449.10 30 211 2.5E-222 T 15-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 Trad_1360 9106b200dc41fd57e887ae1e37574f1f 528 Gene3D G3DSA:3.90.228.20 212 513 2.5E-222 T 15-10-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 Trad_1360 9106b200dc41fd57e887ae1e37574f1f 528 Pfam PF01293 Phosphoenolpyruvate carboxykinase 22 480 6.6E-216 T 15-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 Trad_2508 f39657f30e9404b5c4cbc8df5f754d95 210 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 203 9.6E-18 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Trad_2508 f39657f30e9404b5c4cbc8df5f754d95 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 180 1.3E-13 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Trad_2508 f39657f30e9404b5c4cbc8df5f754d95 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 192 1.3E-13 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Trad_2508 f39657f30e9404b5c4cbc8df5f754d95 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 164 1.3E-13 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Trad_2508 f39657f30e9404b5c4cbc8df5f754d95 210 Gene3D G3DSA:3.40.50.12740 2 210 9.4E-67 T 15-10-2018 Trad_2508 f39657f30e9404b5c4cbc8df5f754d95 210 SUPERFAMILY SSF46894 142 210 1.56E-22 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Trad_2508 f39657f30e9404b5c4cbc8df5f754d95 210 Pfam PF00072 Response regulator receiver domain 4 113 3.2E-26 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Trad_2508 f39657f30e9404b5c4cbc8df5f754d95 210 SUPERFAMILY SSF52172 1 130 2.85E-33 T 15-10-2018 IPR011006 CheY-like superfamily Trad_2508 f39657f30e9404b5c4cbc8df5f754d95 210 SMART SM00421 147 204 2.0E-25 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Trad_2508 f39657f30e9404b5c4cbc8df5f754d95 210 ProSitePatterns PS00622 LuxR-type HTH domain signature. 164 191 - T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Trad_2508 f39657f30e9404b5c4cbc8df5f754d95 210 SMART SM00448 2 112 7.6E-33 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Trad_0203 2be66dd7766e5b257f568430333ccab7 95 Gene3D G3DSA:3.30.110.20 1 90 3.6E-36 T 15-10-2018 IPR036882 Alba-like domain superfamily GO:0003676 Trad_0203 2be66dd7766e5b257f568430333ccab7 95 Pfam PF04232 Stage V sporulation protein S (SpoVS) 2 83 3.0E-35 T 15-10-2018 IPR007347 Sporulation stage V, protein S Trad_0203 2be66dd7766e5b257f568430333ccab7 95 ProDom PD061837 SPORULATION V STAGE S SPOVS-RELATED SPOVS CELL SEPTATION SPOVS3 RELATED 4 84 4.0E-30 T 15-10-2018 IPR007347 Sporulation stage V, protein S Trad_2674 a79fbcd1e0807a65e8422e132ee55188 161 Pfam PF03334 Na+/H+ antiporter subunit 13 91 8.3E-26 T 15-10-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:1902600 Trad_2674 a79fbcd1e0807a65e8422e132ee55188 161 TIGRFAM TIGR01300 CPA3_mnhG_phaG: monovalent cation/proton antiporter, MnhG/PhaG subunit 12 93 1.8E-24 T 15-10-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:1902600 Trad_0017 31f087fd47f20b540fa8fbfd393a4481 704 SUPERFAMILY SSF52833 28 154 8.54E-34 T 15-10-2018 IPR036249 Thioredoxin-like superfamily Trad_0017 31f087fd47f20b540fa8fbfd393a4481 704 Gene3D G3DSA:1.50.10.10 419 611 1.5E-5 T 15-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 Trad_0017 31f087fd47f20b540fa8fbfd393a4481 704 SUPERFAMILY SSF48208 203 560 2.33E-74 T 15-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 Trad_0017 31f087fd47f20b540fa8fbfd393a4481 704 Gene3D G3DSA:3.40.30.10 26 194 3.7E-73 T 15-10-2018 Trad_0017 31f087fd47f20b540fa8fbfd393a4481 704 PIRSF PIRSF006402 22 703 2.5E-231 T 15-10-2018 IPR024705 Spermatogenesis-associated protein 20 Trad_0017 31f087fd47f20b540fa8fbfd393a4481 704 Pfam PF03190 Protein of unknown function, DUF255 28 188 9.6E-78 T 15-10-2018 IPR004879 Domain of unknown function DUF255 Trad_1191 275fc388b7551b7dbbb8744633b5faa0 449 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 5 428 102.71 T 15-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 Trad_1191 275fc388b7551b7dbbb8744633b5faa0 449 SUPERFAMILY SSF53383 2 425 4.87E-132 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Trad_1191 275fc388b7551b7dbbb8744633b5faa0 449 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 236 272 - T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Trad_1191 275fc388b7551b7dbbb8744633b5faa0 449 Gene3D G3DSA:3.90.1150.10 10 419 3.6E-174 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Trad_1191 275fc388b7551b7dbbb8744633b5faa0 449 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 6 425 8.2E-181 T 15-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 Trad_1191 275fc388b7551b7dbbb8744633b5faa0 449 Pfam PF00202 Aminotransferase class-III 35 368 5.0E-80 T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Trad_1191 275fc388b7551b7dbbb8744633b5faa0 449 Gene3D G3DSA:3.40.640.10 71 320 3.6E-174 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Trad_1539 c2f0294d742a585edb445bdebb7ae1d9 340 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 64 78 - T 15-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 Trad_1539 c2f0294d742a585edb445bdebb7ae1d9 340 Gene3D G3DSA:3.90.180.10 9 331 3.5E-135 T 15-10-2018 Trad_1539 c2f0294d742a585edb445bdebb7ae1d9 340 SUPERFAMILY SSF51735 142 309 2.57E-46 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_1539 c2f0294d742a585edb445bdebb7ae1d9 340 SUPERFAMILY SSF50129 1 338 5.02E-55 T 15-10-2018 IPR011032 GroES-like superfamily Trad_1539 c2f0294d742a585edb445bdebb7ae1d9 340 Pfam PF00107 Zinc-binding dehydrogenase 179 302 1.1E-28 T 15-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Trad_1539 c2f0294d742a585edb445bdebb7ae1d9 340 Gene3D G3DSA:3.40.50.720 152 289 3.5E-135 T 15-10-2018 Trad_1539 c2f0294d742a585edb445bdebb7ae1d9 340 SMART SM00829 12 338 1.7E-7 T 15-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Trad_1539 c2f0294d742a585edb445bdebb7ae1d9 340 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 135 6.2E-32 T 15-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Trad_1843 66aac64a89a4d23e93c6f9e51405ef42 418 Gene3D G3DSA:3.40.50.720 12 158 5.3E-25 T 15-10-2018 Trad_1843 66aac64a89a4d23e93c6f9e51405ef42 418 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 18 144 3.7E-16 T 15-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 Trad_1843 66aac64a89a4d23e93c6f9e51405ef42 418 Gene3D G3DSA:3.30.360.10 159 306 8.1E-24 T 15-10-2018 Trad_1843 66aac64a89a4d23e93c6f9e51405ef42 418 SUPERFAMILY SSF51735 12 176 7.88E-32 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_1843 66aac64a89a4d23e93c6f9e51405ef42 418 SUPERFAMILY SSF55347 150 321 3.05E-15 T 15-10-2018 Trad_1470 887ad7f4e24916714f52759f2f58a7c3 439 Pfam PF16193 AAA C-terminal domain 181 254 3.9E-16 T 15-10-2018 IPR032423 AAA C-terminal domain Trad_1470 887ad7f4e24916714f52759f2f58a7c3 439 Gene3D G3DSA:3.40.50.300 3 157 1.7E-39 T 15-10-2018 Trad_1470 887ad7f4e24916714f52759f2f58a7c3 439 SUPERFAMILY SSF52540 8 225 9.52E-41 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_1470 887ad7f4e24916714f52759f2f58a7c3 439 SUPERFAMILY SSF48019 240 421 7.94E-65 T 15-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 Trad_1470 887ad7f4e24916714f52759f2f58a7c3 439 SMART SM00382 43 159 4.2E-14 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_1470 887ad7f4e24916714f52759f2f58a7c3 439 Pfam PF12002 MgsA AAA+ ATPase C terminal 255 418 8.0E-63 T 15-10-2018 IPR021886 MgsA AAA+ ATPase C-terminal Trad_1470 887ad7f4e24916714f52759f2f58a7c3 439 Gene3D G3DSA:1.10.3710.10 333 431 2.0E-26 T 15-10-2018 Trad_1470 887ad7f4e24916714f52759f2f58a7c3 439 Gene3D G3DSA:1.10.8.60 159 221 3.0E-7 T 15-10-2018 Trad_1470 887ad7f4e24916714f52759f2f58a7c3 439 Gene3D G3DSA:1.20.272.10 229 332 6.8E-41 T 15-10-2018 Trad_1470 887ad7f4e24916714f52759f2f58a7c3 439 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 47 153 8.6E-15 T 15-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Trad_1798 98447a0878c4c6e9426032418d3653af 173 Pfam PF12724 Flavodoxin domain 6 133 4.8E-25 T 15-10-2018 IPR026816 Flavodoxin domain Trad_1798 98447a0878c4c6e9426032418d3653af 173 SUPERFAMILY SSF52218 4 166 5.74E-19 T 15-10-2018 IPR029039 Flavoprotein-like superfamily Trad_1798 98447a0878c4c6e9426032418d3653af 173 Gene3D G3DSA:3.40.50.360 5 103 1.9E-19 T 15-10-2018 IPR029039 Flavoprotein-like superfamily Trad_2069 5c9b74e921ecb456bc28d8785e3c2ddc 120 Hamap MF_00338 UPF0145 protein YbjQ [ybjQ]. 12 118 24.172 T 15-10-2018 IPR002765 Uncharacterised protein family UPF0145 Trad_2069 5c9b74e921ecb456bc28d8785e3c2ddc 120 Gene3D G3DSA:3.30.110.70 12 120 1.1E-40 T 15-10-2018 Trad_2069 5c9b74e921ecb456bc28d8785e3c2ddc 120 Pfam PF01906 Putative heavy-metal-binding 12 118 7.9E-38 T 15-10-2018 IPR002765 Uncharacterised protein family UPF0145 Trad_2069 5c9b74e921ecb456bc28d8785e3c2ddc 120 SUPERFAMILY SSF117782 12 118 1.57E-34 T 15-10-2018 IPR035439 UPF0145 domain superfamily Trad_0630 14b1e1c8f0b8f128186726bdec6094f4 401 Gene3D G3DSA:3.40.50.2000 6 397 1.5E-88 T 15-10-2018 Trad_0630 14b1e1c8f0b8f128186726bdec6094f4 401 TIGRFAM TIGR02149 glgA_Coryne: glycogen synthase, Corynebacterium family 1 399 4.0E-149 T 15-10-2018 IPR011875 Alpha-maltose-1-phosphate synthase GO:0009250|GO:0016740 KEGG: 00500+2.4.1.342|MetaCyc: PWY-7900 Trad_0630 14b1e1c8f0b8f128186726bdec6094f4 401 Gene3D G3DSA:3.40.50.2000 185 380 1.5E-88 T 15-10-2018 Trad_0630 14b1e1c8f0b8f128186726bdec6094f4 401 Pfam PF13439 Glycosyltransferase Family 4 15 188 2.1E-36 T 15-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Trad_0630 14b1e1c8f0b8f128186726bdec6094f4 401 Pfam PF00534 Glycosyl transferases group 1 204 342 7.1E-28 T 15-10-2018 IPR001296 Glycosyl transferase, family 1 Trad_0630 14b1e1c8f0b8f128186726bdec6094f4 401 SUPERFAMILY SSF53756 1 398 1.7E-91 T 15-10-2018 Trad_1220 32dc9984498f051651e3aa9ccc6a77e3 344 Gene3D G3DSA:3.40.50.11270 20 120 1.2E-91 T 15-10-2018 Trad_1220 32dc9984498f051651e3aa9ccc6a77e3 344 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 11 314 1.1E-92 T 15-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 Trad_1220 32dc9984498f051651e3aa9ccc6a77e3 344 Gene3D G3DSA:3.40.1010.20 121 227 1.2E-91 T 15-10-2018 Trad_1220 32dc9984498f051651e3aa9ccc6a77e3 344 Pfam PF02401 LytB protein 12 312 3.3E-80 T 15-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 Trad_1220 32dc9984498f051651e3aa9ccc6a77e3 344 Gene3D G3DSA:3.40.1010.20 14 311 1.2E-91 T 15-10-2018 Trad_1220 32dc9984498f051651e3aa9ccc6a77e3 344 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 9 317 34.045 T 15-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 Trad_2493 6188a8ccfa084fa5d77dcd0896d99581 378 Gene3D G3DSA:3.90.550.10 24 239 3.4E-32 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Trad_2493 6188a8ccfa084fa5d77dcd0896d99581 378 SUPERFAMILY SSF53448 25 253 1.64E-41 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Trad_2493 6188a8ccfa084fa5d77dcd0896d99581 378 Pfam PF00535 Glycosyl transferase family 2 42 154 1.3E-25 T 15-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Trad_0699 5e8eb3c3cc87eb42a05c9e96c9d2f769 349 SUPERFAMILY SSF55347 136 286 1.59E-31 T 15-10-2018 Trad_0699 5e8eb3c3cc87eb42a05c9e96c9d2f769 349 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 13 131 1.1E-25 T 15-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 Trad_0699 5e8eb3c3cc87eb42a05c9e96c9d2f769 349 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 143 240 1.6E-9 T 15-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 Trad_0699 5e8eb3c3cc87eb42a05c9e96c9d2f769 349 SUPERFAMILY SSF51735 8 159 6.81E-51 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_0699 5e8eb3c3cc87eb42a05c9e96c9d2f769 349 Gene3D G3DSA:3.30.360.10 136 344 8.4E-52 T 15-10-2018 Trad_0699 5e8eb3c3cc87eb42a05c9e96c9d2f769 349 Gene3D G3DSA:3.40.50.720 9 135 5.2E-39 T 15-10-2018 Trad_0465 863a3c3a58bbc8635ebbe5247c757471 434 Gene3D G3DSA:3.40.190.10 141 411 1.3E-82 T 15-10-2018 Trad_0465 863a3c3a58bbc8635ebbe5247c757471 434 SUPERFAMILY SSF53850 25 419 2.23E-71 T 15-10-2018 Trad_0465 863a3c3a58bbc8635ebbe5247c757471 434 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 135 152 - T 15-10-2018 IPR006061 Solute-binding family 1, conserved site GO:0055085 Trad_0465 863a3c3a58bbc8635ebbe5247c757471 434 Gene3D G3DSA:3.40.190.10 39 382 1.3E-82 T 15-10-2018 Trad_0465 863a3c3a58bbc8635ebbe5247c757471 434 Pfam PF13416 Bacterial extracellular solute-binding protein 42 362 6.4E-33 T 15-10-2018 IPR006059 Bacterial extracellular solute-binding protein Trad_1833 d0088b80a468fee295a9b7b6f615c976 235 SMART SM00895 90 214 1.0E-13 T 15-10-2018 IPR011711 GntR, C-terminal Trad_1833 d0088b80a468fee295a9b7b6f615c976 235 Gene3D G3DSA:1.10.10.10 16 82 6.9E-21 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Trad_1833 d0088b80a468fee295a9b7b6f615c976 235 SMART SM00345 22 80 4.5E-18 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Trad_1833 d0088b80a468fee295a9b7b6f615c976 235 Pfam PF07729 FCD domain 90 212 1.0E-18 T 15-10-2018 IPR011711 GntR, C-terminal Trad_1833 d0088b80a468fee295a9b7b6f615c976 235 SUPERFAMILY SSF48008 86 221 4.45E-20 T 15-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Trad_1833 d0088b80a468fee295a9b7b6f615c976 235 Pfam PF00392 Bacterial regulatory proteins, gntR family 20 80 5.1E-17 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Trad_1833 d0088b80a468fee295a9b7b6f615c976 235 SUPERFAMILY SSF46785 17 84 1.61E-18 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Trad_1833 d0088b80a468fee295a9b7b6f615c976 235 Gene3D G3DSA:1.20.120.530 85 227 2.3E-24 T 15-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Trad_1986 36a91679b215cfb1cdf26fde2f0f9771 568 Hamap MF_00900 GTPase HflX [hflX]. 212 567 41.295 T 15-10-2018 IPR016496 GTPase HflX GO:0005525 Trad_1986 36a91679b215cfb1cdf26fde2f0f9771 568 Pfam PF13167 GTP-binding GTPase N-terminal 210 297 3.6E-28 T 15-10-2018 IPR025121 GTPase HflX, N-terminal Trad_1986 36a91679b215cfb1cdf26fde2f0f9771 568 Pfam PF16360 GTP-binding GTPase Middle Region 300 377 7.8E-26 T 15-10-2018 IPR032305 GTP-binding protein, middle domain Trad_1986 36a91679b215cfb1cdf26fde2f0f9771 568 Gene3D G3DSA:3.40.50.11060 202 323 4.8E-36 T 15-10-2018 Trad_1986 36a91679b215cfb1cdf26fde2f0f9771 568 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 456 474 1.1E-7 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 Trad_1986 36a91679b215cfb1cdf26fde2f0f9771 568 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 385 405 1.1E-7 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 Trad_1986 36a91679b215cfb1cdf26fde2f0f9771 568 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 193 545 1.0E-129 T 15-10-2018 IPR016496 GTPase HflX GO:0005525 Trad_1986 36a91679b215cfb1cdf26fde2f0f9771 568 SUPERFAMILY SSF52540 383 554 2.2E-34 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_1986 36a91679b215cfb1cdf26fde2f0f9771 568 Gene3D G3DSA:3.40.50.300 382 549 1.7E-34 T 15-10-2018 Trad_1986 36a91679b215cfb1cdf26fde2f0f9771 568 Pfam PF01926 50S ribosome-binding GTPase 385 506 3.7E-16 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 Trad_0733 a653c6ad1756594bb5924091ba67b6fe 276 PRINTS PR00377 Inositol monophosphatase superfamily signature 66 82 4.1E-11 T 15-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Trad_0733 a653c6ad1756594bb5924091ba67b6fe 276 PRINTS PR00377 Inositol monophosphatase superfamily signature 216 240 4.1E-11 T 15-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Trad_0733 a653c6ad1756594bb5924091ba67b6fe 276 PRINTS PR00377 Inositol monophosphatase superfamily signature 44 64 4.1E-11 T 15-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Trad_0733 a653c6ad1756594bb5924091ba67b6fe 276 PRINTS PR00377 Inositol monophosphatase superfamily signature 90 106 4.1E-11 T 15-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Trad_0733 a653c6ad1756594bb5924091ba67b6fe 276 SUPERFAMILY SSF56655 10 272 8.64E-78 T 15-10-2018 Trad_0733 a653c6ad1756594bb5924091ba67b6fe 276 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 13 258 1.2E-90 T 15-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 Trad_0733 a653c6ad1756594bb5924091ba67b6fe 276 Hamap MF_02095 3'(2'),5'-bisphosphate nucleotidase CysQ [cysQ]. 11 260 42.192 T 15-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 Trad_0733 a653c6ad1756594bb5924091ba67b6fe 276 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 219 233 - T 15-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 Trad_0733 a653c6ad1756594bb5924091ba67b6fe 276 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 90 103 - T 15-10-2018 IPR020583 Inositol monophosphatase, metal-binding site Trad_0733 a653c6ad1756594bb5924091ba67b6fe 276 Pfam PF00459 Inositol monophosphatase family 13 270 1.4E-50 T 15-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Trad_0733 a653c6ad1756594bb5924091ba67b6fe 276 Gene3D G3DSA:3.40.190.80 158 262 6.7E-35 T 15-10-2018 Trad_0733 a653c6ad1756594bb5924091ba67b6fe 276 Gene3D G3DSA:3.30.540.10 7 156 1.6E-46 T 15-10-2018 Trad_1059 fb5cc4e0653111b67966cb846183211d 195 ProSitePatterns PS00113 Adenylate kinase signature. 90 101 - T 15-10-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Trad_1059 fb5cc4e0653111b67966cb846183211d 195 Hamap MF_00235 Adenylate kinase [adk]. 11 195 40.811 T 15-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Trad_1059 fb5cc4e0653111b67966cb846183211d 195 Gene3D G3DSA:3.40.50.300 7 195 2.2E-57 T 15-10-2018 Trad_1059 fb5cc4e0653111b67966cb846183211d 195 Pfam PF00406 Adenylate kinase 15 172 4.3E-49 T 15-10-2018 Trad_1059 fb5cc4e0653111b67966cb846183211d 195 SUPERFAMILY SSF52540 6 194 3.37E-37 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_1059 fb5cc4e0653111b67966cb846183211d 195 PRINTS PR00094 Adenylate kinase signature 42 56 1.8E-32 T 15-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Trad_1059 fb5cc4e0653111b67966cb846183211d 195 PRINTS PR00094 Adenylate kinase signature 142 157 1.8E-32 T 15-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Trad_1059 fb5cc4e0653111b67966cb846183211d 195 PRINTS PR00094 Adenylate kinase signature 14 27 1.8E-32 T 15-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Trad_1059 fb5cc4e0653111b67966cb846183211d 195 PRINTS PR00094 Adenylate kinase signature 90 106 1.8E-32 T 15-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Trad_1059 fb5cc4e0653111b67966cb846183211d 195 PRINTS PR00094 Adenylate kinase signature 159 173 1.8E-32 T 15-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Trad_0644 722e157f2ea36d45cadeb13d59dcb7ac 157 ProSitePatterns PS00893 Nudix box signature. 40 61 - T 15-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 Trad_0644 722e157f2ea36d45cadeb13d59dcb7ac 157 SUPERFAMILY SSF55811 6 139 6.63E-26 T 15-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Trad_0644 722e157f2ea36d45cadeb13d59dcb7ac 157 PRINTS PR00502 NUDIX hydrolase family signature 35 49 1.1E-5 T 15-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Trad_0644 722e157f2ea36d45cadeb13d59dcb7ac 157 PRINTS PR00502 NUDIX hydrolase family signature 49 64 1.1E-5 T 15-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Trad_0644 722e157f2ea36d45cadeb13d59dcb7ac 157 Gene3D G3DSA:3.90.79.10 1 137 7.2E-24 T 15-10-2018 Trad_0644 722e157f2ea36d45cadeb13d59dcb7ac 157 Pfam PF00293 NUDIX domain 8 127 3.0E-19 T 15-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Trad_1734 7f47704f391a43102d01738d2ce0dffd 569 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 85 284 1.3E-12 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Trad_1734 7f47704f391a43102d01738d2ce0dffd 569 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 383 561 1.7E-13 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Trad_1734 7f47704f391a43102d01738d2ce0dffd 569 SUPERFAMILY SSF161098 22 287 3.66E-44 T 15-10-2018 IPR035906 MetI-like superfamily Trad_1734 7f47704f391a43102d01738d2ce0dffd 569 SUPERFAMILY SSF161098 303 560 7.33E-43 T 15-10-2018 IPR035906 MetI-like superfamily Trad_1734 7f47704f391a43102d01738d2ce0dffd 569 Gene3D G3DSA:1.10.3720.10 21 287 2.0E-42 T 15-10-2018 IPR035906 MetI-like superfamily Trad_1734 7f47704f391a43102d01738d2ce0dffd 569 Gene3D G3DSA:1.10.3720.10 305 566 2.2E-37 T 15-10-2018 IPR035906 MetI-like superfamily Trad_0814 e94b36cec1f761ae534da551a0ac3963 296 SUPERFAMILY SSF51366 7 284 3.94E-69 T 15-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Trad_0814 e94b36cec1f761ae534da551a0ac3963 296 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 20 276 1.4E-28 T 15-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Trad_0814 e94b36cec1f761ae534da551a0ac3963 296 Gene3D G3DSA:3.20.20.70 7 291 8.1E-95 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Trad_0814 e94b36cec1f761ae534da551a0ac3963 296 TIGRFAM TIGR02127 pyrF_sub2: orotidine 5'-phosphate decarboxylase 7 278 1.2E-83 T 15-10-2018 IPR011995 Orotidine 5'-phosphate decarboxylase, type 2 GO:0004590|GO:0006221 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Trad_0814 e94b36cec1f761ae534da551a0ac3963 296 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 102 115 - T 15-10-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Trad_0814 e94b36cec1f761ae534da551a0ac3963 296 SMART SM00934 21 278 3.3E-28 T 15-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Trad_0814 e94b36cec1f761ae534da551a0ac3963 296 Hamap MF_01215 Orotidine 5'-phosphate decarboxylase [pyrF]. 6 291 37.101 T 15-10-2018 IPR011995 Orotidine 5'-phosphate decarboxylase, type 2 GO:0004590|GO:0006221 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Trad_0040 e93606859b8ee6992c9e8d380b76e0e9 222 Gene3D G3DSA:3.40.390.10 30 215 2.2E-5 T 15-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 Trad_0040 e93606859b8ee6992c9e8d380b76e0e9 222 SUPERFAMILY SSF55486 87 215 3.61E-5 T 15-10-2018 Trad_1954 a1e5bad072d00bd05520691c0bb1d010 561 Hamap MF_01227 CTP synthase [pyrG]. 4 543 50.511 T 15-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 Trad_1954 a1e5bad072d00bd05520691c0bb1d010 561 Gene3D G3DSA:3.40.50.300 1 287 4.7E-129 T 15-10-2018 Trad_1954 a1e5bad072d00bd05520691c0bb1d010 561 TIGRFAM TIGR00337 PyrG: CTP synthase 3 538 3.6E-226 T 15-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 Trad_1954 a1e5bad072d00bd05520691c0bb1d010 561 SUPERFAMILY SSF52317 291 542 2.6E-74 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like Trad_1954 a1e5bad072d00bd05520691c0bb1d010 561 Pfam PF06418 CTP synthase N-terminus 5 269 1.2E-119 T 15-10-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 Trad_1954 a1e5bad072d00bd05520691c0bb1d010 561 Gene3D G3DSA:3.40.50.880 288 555 8.1E-96 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like Trad_1954 a1e5bad072d00bd05520691c0bb1d010 561 SUPERFAMILY SSF52540 4 272 2.69E-115 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_1954 a1e5bad072d00bd05520691c0bb1d010 561 Pfam PF00117 Glutamine amidotransferase class-I 304 536 3.8E-44 T 15-10-2018 IPR017926 Glutamine amidotransferase Trad_0162 c5811f87941d053c9e8498be8ab2621a 562 SUPERFAMILY SSF53067 285 536 1.13E-60 T 15-10-2018 Trad_0162 c5811f87941d053c9e8498be8ab2621a 562 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 10 280 3.9E-13 T 15-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 Trad_0162 c5811f87941d053c9e8498be8ab2621a 562 PIRSF PIRSF000538 8 536 4.3E-67 T 15-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 Trad_0162 c5811f87941d053c9e8498be8ab2621a 562 TIGRFAM TIGR01234 L-ribulokinase: ribulokinase 10 538 2.1E-224 T 15-10-2018 IPR005929 Ribulokinase GO:0005524|GO:0008741|GO:0019569 KEGG: 00040+2.7.1.16 Trad_0162 c5811f87941d053c9e8498be8ab2621a 562 SUPERFAMILY SSF53067 10 284 1.84E-38 T 15-10-2018 Trad_0162 c5811f87941d053c9e8498be8ab2621a 562 Hamap MF_00520 Ribulokinase [araB]. 8 548 49.573 T 15-10-2018 IPR005929 Ribulokinase GO:0005524|GO:0008741|GO:0019569 KEGG: 00040+2.7.1.16 Trad_0162 c5811f87941d053c9e8498be8ab2621a 562 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 293 491 2.1E-43 T 15-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 Trad_0162 c5811f87941d053c9e8498be8ab2621a 562 Gene3D G3DSA:3.30.420.40 7 284 7.4E-66 T 15-10-2018 Trad_0162 c5811f87941d053c9e8498be8ab2621a 562 Gene3D G3DSA:3.30.420.40 285 541 5.8E-82 T 15-10-2018 Trad_0162 c5811f87941d053c9e8498be8ab2621a 562 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 402 422 - T 15-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 Trad_2687 cee24ecee9b6e054d57a8766fcc93c2e 546 Pfam PF00128 Alpha amylase, catalytic domain 260 423 2.2E-10 T 15-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Trad_2687 cee24ecee9b6e054d57a8766fcc93c2e 546 Pfam PF00128 Alpha amylase, catalytic domain 134 218 1.9E-23 T 15-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Trad_2687 cee24ecee9b6e054d57a8766fcc93c2e 546 Gene3D G3DSA:2.60.40.10 1 87 1.9E-14 T 15-10-2018 IPR013783 Immunoglobulin-like fold Trad_2687 cee24ecee9b6e054d57a8766fcc93c2e 546 SUPERFAMILY SSF81296 2 79 1.38E-12 T 15-10-2018 IPR014756 Immunoglobulin E-set Trad_2687 cee24ecee9b6e054d57a8766fcc93c2e 546 SUPERFAMILY SSF51445 95 464 2.62E-97 T 15-10-2018 IPR017853 Glycoside hydrolase superfamily Trad_2687 cee24ecee9b6e054d57a8766fcc93c2e 546 Gene3D G3DSA:3.20.20.80 96 466 4.0E-91 T 15-10-2018 Trad_2687 cee24ecee9b6e054d57a8766fcc93c2e 546 Gene3D G3DSA:2.60.40.1180 467 542 5.0E-7 T 15-10-2018 IPR013780 Glycosyl hydrolase, all-beta Trad_2687 cee24ecee9b6e054d57a8766fcc93c2e 546 PIRSF PIRSF000463 370 536 8.5E-8 T 15-10-2018 IPR037439 1,4-alpha-glucan-branching enzyme GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900|Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 Trad_2687 cee24ecee9b6e054d57a8766fcc93c2e 546 PIRSF PIRSF000463 1 292 1.4E-44 T 15-10-2018 IPR037439 1,4-alpha-glucan-branching enzyme GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900|Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 Trad_2687 cee24ecee9b6e054d57a8766fcc93c2e 546 SMART SM00642 117 457 1.4E-23 T 15-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Trad_2687 cee24ecee9b6e054d57a8766fcc93c2e 546 Pfam PF11941 Domain of unknown function (DUF3459) 449 542 7.2E-5 T 15-10-2018 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) Trad_2687 cee24ecee9b6e054d57a8766fcc93c2e 546 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 2 73 4.4E-9 T 15-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 Trad_2687 cee24ecee9b6e054d57a8766fcc93c2e 546 SUPERFAMILY SSF51011 468 544 1.01E-9 T 15-10-2018 Trad_1458 44d8b884df5eecc62fcf715895304007 383 Pfam PF00563 EAL domain 123 354 1.4E-54 T 15-10-2018 IPR001633 EAL domain Trad_1458 44d8b884df5eecc62fcf715895304007 383 SUPERFAMILY SSF141868 122 355 1.31E-61 T 15-10-2018 IPR035919 EAL domain superfamily Trad_1458 44d8b884df5eecc62fcf715895304007 383 SMART SM00052 114 359 2.3E-28 T 15-10-2018 IPR001633 EAL domain Trad_1458 44d8b884df5eecc62fcf715895304007 383 Gene3D G3DSA:3.20.20.450 118 360 2.3E-60 T 15-10-2018 IPR035919 EAL domain superfamily Trad_1210 3263a955606408c8e67911307077ebf8 898 Gene3D G3DSA:1.25.40.10 776 896 1.7E-16 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Trad_1210 3263a955606408c8e67911307077ebf8 898 SUPERFAMILY SSF48452 784 894 7.96E-11 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Trad_1210 3263a955606408c8e67911307077ebf8 898 SUPERFAMILY SSF46894 698 761 9.35E-7 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Trad_1210 3263a955606408c8e67911307077ebf8 898 SMART SM01043 774 897 1.9E-17 T 15-10-2018 IPR005158 Bacterial transcriptional activator domain Trad_1210 3263a955606408c8e67911307077ebf8 898 Pfam PF03704 Bacterial transcriptional activator domain 784 894 1.9E-12 T 15-10-2018 IPR005158 Bacterial transcriptional activator domain Trad_1210 3263a955606408c8e67911307077ebf8 898 Gene3D G3DSA:1.10.10.10 683 775 4.7E-11 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Trad_2112 538aa554fb80326158c30e07c48f0044 143 Gene3D G3DSA:3.40.1650.10 1 143 4.0E-44 T 15-10-2018 IPR023750 RbsD-like superfamily GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 Trad_2112 538aa554fb80326158c30e07c48f0044 143 SUPERFAMILY SSF102546 1 141 3.66E-40 T 15-10-2018 IPR023750 RbsD-like superfamily GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 Trad_2112 538aa554fb80326158c30e07c48f0044 143 Pfam PF05025 RbsD / FucU transport protein family 4 141 1.6E-33 T 15-10-2018 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 Trad_1564 ed201cbfddf8f2e897d4c0dbeb3c4204 320 SUPERFAMILY SSF53448 2 249 7.22E-43 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Trad_1564 ed201cbfddf8f2e897d4c0dbeb3c4204 320 Gene3D G3DSA:3.90.550.10 2 206 6.2E-39 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Trad_1564 ed201cbfddf8f2e897d4c0dbeb3c4204 320 Pfam PF00535 Glycosyl transferase family 2 7 160 7.2E-22 T 15-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Trad_0267 0ca1f5506fe78f285796eed4a7272fa4 224 Pfam PF12706 Beta-lactamase superfamily domain 19 188 7.1E-25 T 15-10-2018 IPR001279 Metallo-beta-lactamase Trad_0267 0ca1f5506fe78f285796eed4a7272fa4 224 SUPERFAMILY SSF56281 2 223 1.11E-35 T 15-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Trad_0267 0ca1f5506fe78f285796eed4a7272fa4 224 Hamap MF_00457 UPF0173 metal-dependent hydrolase . 1 224 37.646 T 15-10-2018 IPR022877 Protein of unknown funcion UPF0173 Trad_0267 0ca1f5506fe78f285796eed4a7272fa4 224 Gene3D G3DSA:3.60.15.10 1 224 8.3E-73 T 15-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Trad_0267 0ca1f5506fe78f285796eed4a7272fa4 224 SMART SM00849 7 187 2.4E-11 T 15-10-2018 IPR001279 Metallo-beta-lactamase Trad_1287 e777037b6c059c52d6b439d8de2627ed 140 Pfam PF00572 Ribosomal protein L13 13 136 5.4E-57 T 15-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 Trad_1287 e777037b6c059c52d6b439d8de2627ed 140 Gene3D G3DSA:3.90.1180.10 2 140 1.3E-64 T 15-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 Trad_1287 e777037b6c059c52d6b439d8de2627ed 140 SUPERFAMILY SSF52161 6 138 3.14E-55 T 15-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 Trad_1287 e777037b6c059c52d6b439d8de2627ed 140 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 7 138 3.2E-58 T 15-10-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_1287 e777037b6c059c52d6b439d8de2627ed 140 PIRSF PIRSF002181 2 140 4.0E-56 T 15-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 Trad_1287 e777037b6c059c52d6b439d8de2627ed 140 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 13 139 28.809 T 15-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 Trad_1938 3f74852a09be1971ef432d4101f944a3 366 Gene3D G3DSA:3.20.20.70 94 352 4.3E-95 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Trad_1938 3f74852a09be1971ef432d4101f944a3 366 Pfam PF00793 DAHP synthetase I family 109 348 5.7E-77 T 15-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 Trad_1938 3f74852a09be1971ef432d4101f944a3 366 SUPERFAMILY SSF51569 61 350 1.28E-95 T 15-10-2018 Trad_1938 3f74852a09be1971ef432d4101f944a3 366 SUPERFAMILY SSF48600 4 87 1.98E-20 T 15-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 Trad_1938 3f74852a09be1971ef432d4101f944a3 366 Gene3D G3DSA:1.20.59.10 1 90 8.4E-27 T 15-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 Trad_1938 3f74852a09be1971ef432d4101f944a3 366 SMART SM00830 9 88 5.9E-26 T 15-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 Trad_1938 3f74852a09be1971ef432d4101f944a3 366 Pfam PF01817 Chorismate mutase type II 9 86 4.3E-20 T 15-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 Trad_1938 3f74852a09be1971ef432d4101f944a3 366 TIGRFAM TIGR01361 DAHP_synth_Bsub: 3-deoxy-7-phosphoheptulonate synthase 94 350 5.8E-120 T 15-10-2018 IPR006268 Phospho-2-dehydro-3-deoxyheptonate aldolase, subtype 2 GO:0009073|GO:0016832 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 Trad_1848 19f2628a9f3de6b66541d19d6d284d16 278 SUPERFAMILY SSF51658 2 257 5.8E-44 T 15-10-2018 IPR036237 Xylose isomerase-like superfamily Trad_1848 19f2628a9f3de6b66541d19d6d284d16 278 Pfam PF01261 Xylose isomerase-like TIM barrel 20 219 1.6E-26 T 15-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain Trad_1848 19f2628a9f3de6b66541d19d6d284d16 278 Pfam PF07582 AP endonuclease family 2 C terminus 231 251 9.2E-5 T 15-10-2018 IPR011418 AP endonuclease, family 2, C-terminal Trad_1848 19f2628a9f3de6b66541d19d6d284d16 278 Gene3D G3DSA:3.20.20.150 1 273 3.3E-64 T 15-10-2018 Trad_1901 e82548558c622c385039bf779e31aaf1 279 Pfam PF00005 ABC transporter 40 194 1.3E-30 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Trad_1901 e82548558c622c385039bf779e31aaf1 279 SUPERFAMILY SSF52540 14 266 7.55E-56 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_1901 e82548558c622c385039bf779e31aaf1 279 ProSitePatterns PS00211 ABC transporters family signature. 166 180 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Trad_1901 e82548558c622c385039bf779e31aaf1 279 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 22 279 1.7E-114 T 15-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 Trad_1901 e82548558c622c385039bf779e31aaf1 279 Gene3D G3DSA:3.40.50.300 19 277 1.7E-62 T 15-10-2018 Trad_1901 e82548558c622c385039bf779e31aaf1 279 SMART SM00382 46 240 5.2E-14 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_1376 4cd463b34171202bb1453dc82fc8a4ae 220 Gene3D G3DSA:3.40.50.10260 1 205 3.2E-37 T 15-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 Trad_1376 4cd463b34171202bb1453dc82fc8a4ae 220 SUPERFAMILY SSF64153 2 209 2.22E-39 T 15-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 Trad_1376 4cd463b34171202bb1453dc82fc8a4ae 220 Pfam PF03853 YjeF-related protein N-terminus 22 180 7.7E-30 T 15-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 Trad_1376 4cd463b34171202bb1453dc82fc8a4ae 220 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 2 198 20.727 T 15-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 Trad_2815 3122aa1635f0b0d044f1a8bf5684287a 288 SUPERFAMILY SSF53448 13 235 2.72E-40 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Trad_2815 3122aa1635f0b0d044f1a8bf5684287a 288 Gene3D G3DSA:3.90.550.10 5 210 1.6E-39 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Trad_2815 3122aa1635f0b0d044f1a8bf5684287a 288 Pfam PF00535 Glycosyl transferase family 2 15 148 8.1E-18 T 15-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Trad_0337 af6ce7c3de6e2b27ccd29b228d33b1ce 174 Pfam PF00583 Acetyltransferase (GNAT) family 84 148 9.2E-14 T 15-10-2018 IPR000182 GNAT domain Trad_0337 af6ce7c3de6e2b27ccd29b228d33b1ce 174 Gene3D G3DSA:3.40.630.30 5 173 2.2E-35 T 15-10-2018 Trad_0337 af6ce7c3de6e2b27ccd29b228d33b1ce 174 SUPERFAMILY SSF55729 9 174 3.88E-32 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase Trad_2342 ed4f26bbd8bad3487c8a31195733c845 274 Pfam PF01070 FMN-dependent dehydrogenase 140 265 3.7E-23 T 15-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 Trad_2342 ed4f26bbd8bad3487c8a31195733c845 274 SUPERFAMILY SSF51395 17 266 3.02E-35 T 15-10-2018 Trad_2342 ed4f26bbd8bad3487c8a31195733c845 274 Gene3D G3DSA:3.20.20.70 12 268 1.7E-40 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Trad_2388 d0eb70d5398bead5b7e57d4146cd4762 156 Gene3D G3DSA:1.10.10.10 1 55 2.3E-20 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Trad_2388 d0eb70d5398bead5b7e57d4146cd4762 156 SUPERFAMILY SSF54909 62 144 1.47E-16 T 15-10-2018 IPR011008 Dimeric alpha-beta barrel Trad_2388 d0eb70d5398bead5b7e57d4146cd4762 156 SUPERFAMILY SSF46785 2 61 6.92E-17 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Trad_2388 d0eb70d5398bead5b7e57d4146cd4762 156 Pfam PF01037 Lrp/AsnC ligand binding domain 77 139 6.9E-16 T 15-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain Trad_2388 d0eb70d5398bead5b7e57d4146cd4762 156 SMART SM00344 2 109 1.1E-34 T 15-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 Trad_2388 d0eb70d5398bead5b7e57d4146cd4762 156 Pfam PF13404 AsnC-type helix-turn-helix domain 3 43 2.0E-15 T 15-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Trad_2388 d0eb70d5398bead5b7e57d4146cd4762 156 Gene3D G3DSA:3.30.70.920 56 145 1.3E-20 T 15-10-2018 Trad_2388 d0eb70d5398bead5b7e57d4146cd4762 156 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 18 29 8.2E-14 T 15-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Trad_2388 d0eb70d5398bead5b7e57d4146cd4762 156 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 29 48 8.2E-14 T 15-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Trad_2388 d0eb70d5398bead5b7e57d4146cd4762 156 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 2 18 8.2E-14 T 15-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Trad_0220 c3a2529907d809c453fcb1e5ecde8662 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 7.8E-8 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Trad_0220 c3a2529907d809c453fcb1e5ecde8662 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 7.8E-8 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Trad_0220 c3a2529907d809c453fcb1e5ecde8662 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 7.8E-8 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Trad_0220 c3a2529907d809c453fcb1e5ecde8662 304 Gene3D G3DSA:3.40.190.10 91 293 7.6E-60 T 15-10-2018 Trad_0220 c3a2529907d809c453fcb1e5ecde8662 304 Pfam PF03466 LysR substrate binding domain 87 297 4.8E-40 T 15-10-2018 IPR005119 LysR, substrate-binding Trad_0220 c3a2529907d809c453fcb1e5ecde8662 304 SUPERFAMILY SSF53850 89 300 4.03E-36 T 15-10-2018 Trad_0220 c3a2529907d809c453fcb1e5ecde8662 304 SUPERFAMILY SSF46785 1 109 1.82E-23 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Trad_0220 c3a2529907d809c453fcb1e5ecde8662 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 7.9E-22 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Trad_0220 c3a2529907d809c453fcb1e5ecde8662 304 Gene3D G3DSA:3.40.190.10 161 265 7.6E-60 T 15-10-2018 Trad_0220 c3a2529907d809c453fcb1e5ecde8662 304 Gene3D G3DSA:1.10.10.10 1 85 1.0E-28 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Trad_2576 e72593291c249b808983bf866874cabf 320 Gene3D G3DSA:3.20.10.10 142 319 2.6E-48 T 15-10-2018 Trad_2576 e72593291c249b808983bf866874cabf 320 Pfam PF01063 Amino-transferase class IV 49 279 2.6E-45 T 15-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 Trad_2576 e72593291c249b808983bf866874cabf 320 Gene3D G3DSA:3.30.470.10 9 141 1.6E-42 T 15-10-2018 Trad_2576 e72593291c249b808983bf866874cabf 320 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 23 318 4.0E-117 T 15-10-2018 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767 Trad_2576 e72593291c249b808983bf866874cabf 320 SUPERFAMILY SSF56752 20 318 1.23E-93 T 15-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 Trad_0297 cf3f712450448919847b8afe08731439 372 SUPERFAMILY SSF161098 59 180 2.13E-19 T 15-10-2018 IPR035906 MetI-like superfamily Trad_0297 cf3f712450448919847b8afe08731439 372 SUPERFAMILY SSF161098 175 358 1.57E-31 T 15-10-2018 IPR035906 MetI-like superfamily Trad_0297 cf3f712450448919847b8afe08731439 372 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 228 365 3.6E-15 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Trad_0297 cf3f712450448919847b8afe08731439 372 Gene3D G3DSA:1.10.3720.10 173 369 1.7E-35 T 15-10-2018 IPR035906 MetI-like superfamily Trad_0297 cf3f712450448919847b8afe08731439 372 Gene3D G3DSA:1.10.3720.10 3 168 1.3E-22 T 15-10-2018 IPR035906 MetI-like superfamily Trad_2435 dae68b9999295e3a669186dfec2b1e92 263 Gene3D G3DSA:3.40.190.10 41 258 1.4E-62 T 15-10-2018 Trad_2435 dae68b9999295e3a669186dfec2b1e92 263 SMART SM00062 41 262 5.2E-59 T 15-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Trad_2435 dae68b9999295e3a669186dfec2b1e92 263 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 43 259 1.4E-59 T 15-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Trad_2435 dae68b9999295e3a669186dfec2b1e92 263 SMART SM00079 41 261 1.7E-4 T 15-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 Trad_2435 dae68b9999295e3a669186dfec2b1e92 263 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 64 77 - T 15-10-2018 IPR018313 Solute-binding protein family 3, conserved site Trad_2435 dae68b9999295e3a669186dfec2b1e92 263 SUPERFAMILY SSF53850 14 259 3.11E-64 T 15-10-2018 Trad_2435 dae68b9999295e3a669186dfec2b1e92 263 Gene3D G3DSA:3.40.190.10 125 225 1.4E-62 T 15-10-2018 Trad_2373 c79726588c78d98af6df5a73764a59e0 522 SMART SM00382 35 175 1.8E-8 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_2373 c79726588c78d98af6df5a73764a59e0 522 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 39 57 4.9E-5 T 15-10-2018 IPR001270 ClpA/B family GO:0005524 Trad_2373 c79726588c78d98af6df5a73764a59e0 522 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 120 138 4.9E-5 T 15-10-2018 IPR001270 ClpA/B family GO:0005524 Trad_2373 c79726588c78d98af6df5a73764a59e0 522 Gene3D G3DSA:3.40.50.300 11 173 5.9E-90 T 15-10-2018 Trad_2373 c79726588c78d98af6df5a73764a59e0 522 Gene3D G3DSA:1.10.8.60 9 230 5.9E-90 T 15-10-2018 Trad_2373 c79726588c78d98af6df5a73764a59e0 522 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 289 6.1E-102 T 15-10-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 Trad_2373 c79726588c78d98af6df5a73764a59e0 522 Pfam PF13177 DNA polymerase III, delta subunit 18 174 2.7E-44 T 15-10-2018 Trad_2373 c79726588c78d98af6df5a73764a59e0 522 SUPERFAMILY SSF52540 31 218 1.76E-54 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_0054 bd200b7432c012f842016b14c34a0b34 322 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 9 311 1.7E-97 T 15-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family Trad_0054 bd200b7432c012f842016b14c34a0b34 322 SUPERFAMILY SSF53850 23 312 1.17E-77 T 15-10-2018 Trad_0054 bd200b7432c012f842016b14c34a0b34 322 Gene3D G3DSA:3.40.190.10 27 311 1.5E-101 T 15-10-2018 Trad_0054 bd200b7432c012f842016b14c34a0b34 322 Gene3D G3DSA:3.40.190.10 111 248 1.5E-101 T 15-10-2018 Trad_0054 bd200b7432c012f842016b14c34a0b34 322 Pfam PF16868 NMT1-like family 27 311 6.0E-90 T 15-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family Trad_0080 e6a0b38098c6c4dde97041664f9c6383 637 Gene3D G3DSA:2.40.37.10 19 569 1.8E-215 T 15-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Trad_0080 e6a0b38098c6c4dde97041664f9c6383 637 TIGRFAM TIGR01273 speA: arginine decarboxylase 12 635 1.4E-213 T 15-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 Trad_0080 e6a0b38098c6c4dde97041664f9c6383 637 PRINTS PR01180 Arginine decarboxylase signature 175 196 7.9E-69 T 15-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 Trad_0080 e6a0b38098c6c4dde97041664f9c6383 637 PRINTS PR01180 Arginine decarboxylase signature 69 84 7.9E-69 T 15-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 Trad_0080 e6a0b38098c6c4dde97041664f9c6383 637 PRINTS PR01180 Arginine decarboxylase signature 489 514 7.9E-69 T 15-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 Trad_0080 e6a0b38098c6c4dde97041664f9c6383 637 PRINTS PR01180 Arginine decarboxylase signature 199 221 7.9E-69 T 15-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 Trad_0080 e6a0b38098c6c4dde97041664f9c6383 637 PRINTS PR01180 Arginine decarboxylase signature 326 343 7.9E-69 T 15-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 Trad_0080 e6a0b38098c6c4dde97041664f9c6383 637 PRINTS PR01180 Arginine decarboxylase signature 93 107 7.9E-69 T 15-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 Trad_0080 e6a0b38098c6c4dde97041664f9c6383 637 PRINTS PR01180 Arginine decarboxylase signature 464 485 7.9E-69 T 15-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 Trad_0080 e6a0b38098c6c4dde97041664f9c6383 637 PRINTS PR01180 Arginine decarboxylase signature 149 164 7.9E-69 T 15-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 Trad_0080 e6a0b38098c6c4dde97041664f9c6383 637 PRINTS PR01180 Arginine decarboxylase signature 542 563 7.9E-69 T 15-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 Trad_0080 e6a0b38098c6c4dde97041664f9c6383 637 Gene3D G3DSA:3.20.20.10 70 351 1.8E-215 T 15-10-2018 IPR029066 PLP-binding barrel Trad_0080 e6a0b38098c6c4dde97041664f9c6383 637 Hamap MF_01417 Biosynthetic arginine decarboxylase [speA]. 8 636 40.165 T 15-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 Trad_0080 e6a0b38098c6c4dde97041664f9c6383 637 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 78 346 7.9E-46 T 15-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Trad_0080 e6a0b38098c6c4dde97041664f9c6383 637 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 542 555 9.0E-18 T 15-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Trad_0080 e6a0b38098c6c4dde97041664f9c6383 637 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 242 255 9.0E-18 T 15-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Trad_0080 e6a0b38098c6c4dde97041664f9c6383 637 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 125 137 9.0E-18 T 15-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Trad_0080 e6a0b38098c6c4dde97041664f9c6383 637 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 336 355 9.0E-18 T 15-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Trad_0080 e6a0b38098c6c4dde97041664f9c6383 637 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 101 119 9.0E-18 T 15-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Trad_0080 e6a0b38098c6c4dde97041664f9c6383 637 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 101 119 - T 15-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site Trad_0080 e6a0b38098c6c4dde97041664f9c6383 637 SUPERFAMILY SSF51419 69 348 2.43E-64 T 15-10-2018 IPR029066 PLP-binding barrel Trad_0080 e6a0b38098c6c4dde97041664f9c6383 637 SUPERFAMILY SSF50621 459 565 2.51E-10 T 15-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Trad_0080 e6a0b38098c6c4dde97041664f9c6383 637 PIRSF PIRSF001336 2 637 5.5E-243 T 15-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 Trad_0080 e6a0b38098c6c4dde97041664f9c6383 637 Gene3D G3DSA:1.20.58.930 368 460 1.8E-215 T 15-10-2018 Trad_1691 3a901723f91c9dd35bbe7d70a6f66eb2 284 SUPERFAMILY SSF52096 27 283 5.6E-87 T 15-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Trad_1691 3a901723f91c9dd35bbe7d70a6f66eb2 284 Gene3D G3DSA:1.10.12.10 227 284 1.4E-20 T 15-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal Trad_1691 3a901723f91c9dd35bbe7d70a6f66eb2 284 Gene3D G3DSA:3.90.226.10 7 224 4.6E-73 T 15-10-2018 Trad_1691 3a901723f91c9dd35bbe7d70a6f66eb2 284 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 127 147 - T 15-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 Trad_1691 3a901723f91c9dd35bbe7d70a6f66eb2 284 Pfam PF00378 Enoyl-CoA hydratase/isomerase 36 284 2.4E-63 T 15-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 Trad_1436 ac0dc7f6c424aa15986700de77dfbbb2 194 SUPERFAMILY SSF53271 22 187 3.8E-49 T 15-10-2018 IPR029057 Phosphoribosyltransferase-like Trad_1436 ac0dc7f6c424aa15986700de77dfbbb2 194 Gene3D G3DSA:3.40.50.2020 8 193 3.8E-62 T 15-10-2018 Trad_1436 ac0dc7f6c424aa15986700de77dfbbb2 194 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 20 188 2.4E-63 T 15-10-2018 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620 Trad_1436 ac0dc7f6c424aa15986700de77dfbbb2 194 Pfam PF00156 Phosphoribosyl transferase domain 25 173 9.1E-23 T 15-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 Trad_1968 a976335d028b79bfd6a43e9dda355d51 394 Gene3D G3DSA:3.10.290.10 319 394 9.6E-26 T 15-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Trad_1968 a976335d028b79bfd6a43e9dda355d51 394 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 210 222 9.8E-27 T 15-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 Trad_1968 a976335d028b79bfd6a43e9dda355d51 394 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 43 65 9.8E-27 T 15-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 Trad_1968 a976335d028b79bfd6a43e9dda355d51 394 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 177 199 9.8E-27 T 15-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 Trad_1968 a976335d028b79bfd6a43e9dda355d51 394 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 160 175 9.8E-27 T 15-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 Trad_1968 a976335d028b79bfd6a43e9dda355d51 394 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 39 49 - T 15-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Trad_1968 a976335d028b79bfd6a43e9dda355d51 394 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 6 393 3.5E-100 T 15-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 Trad_1968 a976335d028b79bfd6a43e9dda355d51 394 Gene3D G3DSA:1.10.240.10 217 318 2.6E-29 T 15-10-2018 Trad_1968 a976335d028b79bfd6a43e9dda355d51 394 Gene3D G3DSA:3.40.50.620 1 216 3.6E-70 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Trad_1968 a976335d028b79bfd6a43e9dda355d51 394 Pfam PF00579 tRNA synthetases class I (W and Y) 28 304 9.8E-67 T 15-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Trad_1968 a976335d028b79bfd6a43e9dda355d51 394 SUPERFAMILY SSF55174 316 393 1.47E-16 T 15-10-2018 Trad_1968 a976335d028b79bfd6a43e9dda355d51 394 SUPERFAMILY SSF52374 20 304 1.07E-80 T 15-10-2018 Trad_1968 a976335d028b79bfd6a43e9dda355d51 394 Hamap MF_02007 Tyrosine--tRNA ligase [tyrS]. 1 394 43.337 T 15-10-2018 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0004831 KEGG: 00970+6.1.1.1 Trad_1712 a67a42db215116d508c3297f994f3b4f 271 SUPERFAMILY SSF53639 36 258 2.16E-30 T 15-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily Trad_1712 a67a42db215116d508c3297f994f3b4f 271 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 29 231 3.9E-20 T 15-10-2018 IPR001303 Class II aldolase/adducin N-terminal Trad_1712 a67a42db215116d508c3297f994f3b4f 271 SMART SM01007 23 232 6.4E-14 T 15-10-2018 IPR001303 Class II aldolase/adducin N-terminal Trad_1712 a67a42db215116d508c3297f994f3b4f 271 Gene3D G3DSA:3.40.225.10 22 235 2.3E-44 T 15-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily Trad_0045 3f8d4009031836b9411814e3187d0e76 79 Hamap MF_00262 Cell division topological specificity factor [minE]. 1 78 13.078 T 15-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 Trad_0045 3f8d4009031836b9411814e3187d0e76 79 Gene3D G3DSA:3.30.1070.10 1 74 1.2E-13 T 15-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 Trad_0045 3f8d4009031836b9411814e3187d0e76 79 Pfam PF03776 Septum formation topological specificity factor MinE 10 74 2.8E-20 T 15-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 Trad_0045 3f8d4009031836b9411814e3187d0e76 79 SUPERFAMILY SSF55229 26 76 1.09E-11 T 15-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 Trad_0045 3f8d4009031836b9411814e3187d0e76 79 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 4 74 6.1E-23 T 15-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 Trad_2937 aac6886978a1e5bbe55dc293cb965e6d 552 TIGRFAM TIGR00634 recN: DNA repair protein RecN 2 538 1.6E-146 T 15-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 Trad_2937 aac6886978a1e5bbe55dc293cb965e6d 552 PIRSF PIRSF003128 1 543 1.4E-153 T 15-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 Trad_2937 aac6886978a1e5bbe55dc293cb965e6d 552 Gene3D G3DSA:3.40.50.300 251 539 4.5E-63 T 15-10-2018 Trad_2937 aac6886978a1e5bbe55dc293cb965e6d 552 Gene3D G3DSA:3.40.50.300 2 236 2.1E-46 T 15-10-2018 Trad_2937 aac6886978a1e5bbe55dc293cb965e6d 552 Pfam PF02463 RecF/RecN/SMC N terminal domain 4 498 1.4E-18 T 15-10-2018 IPR003395 RecF/RecN/SMC, N-terminal Trad_2937 aac6886978a1e5bbe55dc293cb965e6d 552 SUPERFAMILY SSF52540 2 499 6.85E-57 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_1454 227c703318a21a5131f5e3dea083f797 297 Gene3D G3DSA:3.40.720.10 95 286 2.8E-23 T 15-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 Trad_1454 227c703318a21a5131f5e3dea083f797 297 SUPERFAMILY SSF53649 3 293 3.21E-32 T 15-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 Trad_1454 227c703318a21a5131f5e3dea083f797 297 Pfam PF01676 Metalloenzyme superfamily 185 272 6.3E-16 T 15-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 Trad_0257 c835ff39e434603694b1e37f9a2fd97a 156 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 38 53 - T 15-10-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 Trad_0257 c835ff39e434603694b1e37f9a2fd97a 156 Pfam PF02542 YgbB family 5 153 5.9E-46 T 15-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 Trad_0257 c835ff39e434603694b1e37f9a2fd97a 156 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 4 155 29.674 T 15-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 Trad_0257 c835ff39e434603694b1e37f9a2fd97a 156 SUPERFAMILY SSF69765 4 153 1.7E-44 T 15-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 Trad_0257 c835ff39e434603694b1e37f9a2fd97a 156 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 5 153 5.4E-48 T 15-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 Trad_0257 c835ff39e434603694b1e37f9a2fd97a 156 Gene3D G3DSA:3.30.1330.50 4 155 3.0E-48 T 15-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 Trad_2705 d8fc61f337276bc8b53d19824c58b5ef 489 Pfam PF01040 UbiA prenyltransferase family 216 456 1.2E-23 T 15-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 Trad_2705 d8fc61f337276bc8b53d19824c58b5ef 489 Gene3D G3DSA:3.40.50.1000 23 191 1.6E-13 T 15-10-2018 IPR023214 HAD superfamily Trad_2705 d8fc61f337276bc8b53d19824c58b5ef 489 SUPERFAMILY SSF56784 23 175 3.23E-12 T 15-10-2018 IPR036412 HAD-like superfamily Trad_2705 d8fc61f337276bc8b53d19824c58b5ef 489 Gene3D G3DSA:1.10.357.140 208 358 1.9E-12 T 15-10-2018 Trad_2705 d8fc61f337276bc8b53d19824c58b5ef 489 Pfam PF12710 haloacid dehalogenase-like hydrolase 25 163 7.4E-10 T 15-10-2018 Trad_1251 9f9063932e3e02595d87c32e9bf43fd6 449 SMART SM00612 275 325 5.9 T 15-10-2018 IPR006652 Kelch repeat type 1 GO:0005515 Trad_1251 9f9063932e3e02595d87c32e9bf43fd6 449 SMART SM00612 326 376 0.0048 T 15-10-2018 IPR006652 Kelch repeat type 1 GO:0005515 Trad_1251 9f9063932e3e02595d87c32e9bf43fd6 449 SMART SM00612 379 426 0.088 T 15-10-2018 IPR006652 Kelch repeat type 1 GO:0005515 Trad_1251 9f9063932e3e02595d87c32e9bf43fd6 449 SMART SM00612 163 214 2.1E-6 T 15-10-2018 IPR006652 Kelch repeat type 1 GO:0005515 Trad_1251 9f9063932e3e02595d87c32e9bf43fd6 449 SMART SM00612 221 274 9.9 T 15-10-2018 IPR006652 Kelch repeat type 1 GO:0005515 Trad_1251 9f9063932e3e02595d87c32e9bf43fd6 449 SUPERFAMILY SSF50965 136 385 1.11E-35 T 15-10-2018 IPR011043 Galactose oxidase/kelch, beta-propeller Trad_1251 9f9063932e3e02595d87c32e9bf43fd6 449 Pfam PF01344 Kelch motif 159 200 1.3E-11 T 15-10-2018 IPR006652 Kelch repeat type 1 GO:0005515 Trad_1251 9f9063932e3e02595d87c32e9bf43fd6 449 Pfam PF01344 Kelch motif 375 413 1.2E-7 T 15-10-2018 IPR006652 Kelch repeat type 1 GO:0005515 Trad_1251 9f9063932e3e02595d87c32e9bf43fd6 449 Pfam PF01344 Kelch motif 314 363 5.3E-11 T 15-10-2018 IPR006652 Kelch repeat type 1 GO:0005515 Trad_1251 9f9063932e3e02595d87c32e9bf43fd6 449 Gene3D G3DSA:2.120.10.80 107 291 2.2E-30 T 15-10-2018 IPR015915 Kelch-type beta propeller GO:0005515 Trad_1251 9f9063932e3e02595d87c32e9bf43fd6 449 Gene3D G3DSA:2.120.10.80 292 448 1.9E-35 T 15-10-2018 IPR015915 Kelch-type beta propeller GO:0005515 Trad_1251 9f9063932e3e02595d87c32e9bf43fd6 449 SUPERFAMILY SSF49299 41 119 4.97E-6 T 15-10-2018 IPR035986 PKD domain superfamily Trad_1000 7447a5c5ef7264fc0c9af4ead4138904 3080 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 2679 3020 3.2E-15 T 15-10-2018 IPR007452 Translocation and assembly module TamB Trad_0063 945209c14a3cda86fa95bd946b9b7e43 359 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 5 359 8.8E-105 T 15-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Trad_0063 945209c14a3cda86fa95bd946b9b7e43 359 SMART SM00859 5 140 4.5E-45 T 15-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 Trad_0063 945209c14a3cda86fa95bd946b9b7e43 359 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 5 139 8.0E-29 T 15-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 Trad_0063 945209c14a3cda86fa95bd946b9b7e43 359 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 4 353 38.29 T 15-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Trad_0063 945209c14a3cda86fa95bd946b9b7e43 359 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 157 328 1.9E-18 T 15-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Trad_0063 945209c14a3cda86fa95bd946b9b7e43 359 Gene3D G3DSA:3.40.50.720 5 345 5.5E-104 T 15-10-2018 Trad_0063 945209c14a3cda86fa95bd946b9b7e43 359 Gene3D G3DSA:3.30.360.10 146 327 5.5E-104 T 15-10-2018 Trad_0063 945209c14a3cda86fa95bd946b9b7e43 359 SUPERFAMILY SSF51735 3 172 6.37E-41 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_0063 945209c14a3cda86fa95bd946b9b7e43 359 SUPERFAMILY SSF55347 148 327 3.66E-38 T 15-10-2018 Trad_2611 9c6ac8dfd1672393d80e584645867d69 226 Pfam PF00230 Major intrinsic protein 49 214 5.1E-20 T 15-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Trad_2611 9c6ac8dfd1672393d80e584645867d69 226 SUPERFAMILY SSF81338 19 218 1.16E-33 T 15-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 Trad_2611 9c6ac8dfd1672393d80e584645867d69 226 ProSitePatterns PS00221 MIP family signature. 71 79 - T 15-10-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 Trad_2611 9c6ac8dfd1672393d80e584645867d69 226 PRINTS PR00783 Major intrinsic protein family signature 25 44 7.1E-16 T 15-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Trad_2611 9c6ac8dfd1672393d80e584645867d69 226 PRINTS PR00783 Major intrinsic protein family signature 90 109 7.1E-16 T 15-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Trad_2611 9c6ac8dfd1672393d80e584645867d69 226 PRINTS PR00783 Major intrinsic protein family signature 158 180 7.1E-16 T 15-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Trad_2611 9c6ac8dfd1672393d80e584645867d69 226 PRINTS PR00783 Major intrinsic protein family signature 128 146 7.1E-16 T 15-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Trad_2611 9c6ac8dfd1672393d80e584645867d69 226 PRINTS PR00783 Major intrinsic protein family signature 198 218 7.1E-16 T 15-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Trad_2611 9c6ac8dfd1672393d80e584645867d69 226 Gene3D G3DSA:1.20.1080.10 123 226 4.2E-11 T 15-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 Trad_2611 9c6ac8dfd1672393d80e584645867d69 226 Gene3D G3DSA:1.20.1080.10 21 122 3.1E-21 T 15-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 Trad_2529 fef7407d3bfca705506d55d5fe6600d1 306 Pfam PF00106 short chain dehydrogenase 21 210 1.1E-40 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2529 fef7407d3bfca705506d55d5fe6600d1 306 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 188 205 8.3E-21 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2529 fef7407d3bfca705506d55d5fe6600d1 306 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 93 104 8.3E-21 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2529 fef7407d3bfca705506d55d5fe6600d1 306 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 22 39 8.3E-21 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2529 fef7407d3bfca705506d55d5fe6600d1 306 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 141 157 8.3E-21 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2529 fef7407d3bfca705506d55d5fe6600d1 306 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 186 8.3E-21 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2529 fef7407d3bfca705506d55d5fe6600d1 306 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 93 104 5.9E-8 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2529 fef7407d3bfca705506d55d5fe6600d1 306 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 167 186 5.9E-8 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2529 fef7407d3bfca705506d55d5fe6600d1 306 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 155 5.9E-8 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2529 fef7407d3bfca705506d55d5fe6600d1 306 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 154 182 - T 15-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Trad_2529 fef7407d3bfca705506d55d5fe6600d1 306 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 21 200 0.0022 T 15-10-2018 Trad_2529 fef7407d3bfca705506d55d5fe6600d1 306 Gene3D G3DSA:3.40.50.720 19 257 6.1E-54 T 15-10-2018 Trad_2529 fef7407d3bfca705506d55d5fe6600d1 306 SUPERFAMILY SSF51735 21 251 2.6E-53 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_1371 1c7a7e034679a174c95690144706d2ba 421 Gene3D G3DSA:3.40.605.10 25 415 7.5E-166 T 15-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Trad_1371 1c7a7e034679a174c95690144706d2ba 421 Gene3D G3DSA:3.40.309.10 230 378 7.5E-166 T 15-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Trad_1371 1c7a7e034679a174c95690144706d2ba 421 SUPERFAMILY SSF53720 17 420 7.59E-114 T 15-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Trad_1371 1c7a7e034679a174c95690144706d2ba 421 PIRSF PIRSF000151 6 421 2.6E-173 T 15-10-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 Trad_1371 1c7a7e034679a174c95690144706d2ba 421 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 9 420 41.648 T 15-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Trad_1371 1c7a7e034679a174c95690144706d2ba 421 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 25 410 4.8E-151 T 15-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Trad_1371 1c7a7e034679a174c95690144706d2ba 421 Pfam PF00171 Aldehyde dehydrogenase family 17 287 1.3E-15 T 15-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Trad_1371 1c7a7e034679a174c95690144706d2ba 421 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 327 348 - T 15-10-2018 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Trad_0574 ed7158913c04423c8f2c4f956f22dfa6 596 Gene3D G3DSA:3.30.300.30 457 591 7.5E-7 T 15-10-2018 Trad_0574 ed7158913c04423c8f2c4f956f22dfa6 596 Pfam PF00501 AMP-binding enzyme 38 459 4.8E-95 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Trad_0574 ed7158913c04423c8f2c4f956f22dfa6 596 ProSitePatterns PS00455 Putative AMP-binding domain signature. 189 200 - T 15-10-2018 IPR020845 AMP-binding, conserved site Trad_0574 ed7158913c04423c8f2c4f956f22dfa6 596 Gene3D G3DSA:3.40.50.12780 320 452 1.4E-36 T 15-10-2018 Trad_0574 ed7158913c04423c8f2c4f956f22dfa6 596 Gene3D G3DSA:3.40.50.12780 31 319 1.9E-57 T 15-10-2018 Trad_0574 ed7158913c04423c8f2c4f956f22dfa6 596 SUPERFAMILY SSF56801 12 589 2.09E-124 T 15-10-2018 Trad_2586 dfadeeeeb1f4d69e39ff49bab8bb582d 492 Gene3D G3DSA:3.40.190.10 180 473 1.8E-123 T 15-10-2018 Trad_2586 dfadeeeeb1f4d69e39ff49bab8bb582d 492 SUPERFAMILY SSF53850 22 489 1.25E-130 T 15-10-2018 Trad_2586 dfadeeeeb1f4d69e39ff49bab8bb582d 492 Gene3D G3DSA:3.90.76.10 36 179 1.8E-123 T 15-10-2018 Trad_2586 dfadeeeeb1f4d69e39ff49bab8bb582d 492 Gene3D G3DSA:3.10.105.10 255 463 1.8E-123 T 15-10-2018 Trad_2586 dfadeeeeb1f4d69e39ff49bab8bb582d 492 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 69 397 5.3E-95 T 15-10-2018 IPR000914 Solute-binding protein family 5 domain Trad_2586 dfadeeeeb1f4d69e39ff49bab8bb582d 492 PIRSF PIRSF002741 3 492 1.7E-106 T 15-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Trad_1125 ade42b1c743ca8d9f5fd0691961d618c 300 PRINTS PR00069 Aldo-keto reductase signature 149 166 3.4E-8 T 15-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Trad_1125 ade42b1c743ca8d9f5fd0691961d618c 300 PRINTS PR00069 Aldo-keto reductase signature 220 244 3.4E-8 T 15-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Trad_1125 ade42b1c743ca8d9f5fd0691961d618c 300 PRINTS PR00069 Aldo-keto reductase signature 118 136 3.4E-8 T 15-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Trad_1125 ade42b1c743ca8d9f5fd0691961d618c 300 Gene3D G3DSA:3.20.20.100 15 299 1.9E-82 T 15-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Trad_1125 ade42b1c743ca8d9f5fd0691961d618c 300 SUPERFAMILY SSF51430 13 287 1.44E-74 T 15-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Trad_1125 ade42b1c743ca8d9f5fd0691961d618c 300 Pfam PF00248 Aldo/keto reductase family 24 286 1.7E-63 T 15-10-2018 IPR023210 NADP-dependent oxidoreductase domain Trad_2432 1857fa6c6b0791b827d48d2d34901a0d 334 SUPERFAMILY SSF56059 112 307 5.83E-24 T 15-10-2018 Trad_2432 1857fa6c6b0791b827d48d2d34901a0d 334 Gene3D G3DSA:3.30.470.20 196 297 1.4E-64 T 15-10-2018 Trad_2432 1857fa6c6b0791b827d48d2d34901a0d 334 Pfam PF02655 ATP-grasp domain 121 280 1.4E-11 T 15-10-2018 IPR003806 ATP-grasp fold, DUF201-type GO:0005524|GO:0046872 Trad_2432 1857fa6c6b0791b827d48d2d34901a0d 334 Gene3D G3DSA:3.40.50.20 13 112 1.4E-64 T 15-10-2018 Trad_2432 1857fa6c6b0791b827d48d2d34901a0d 334 Gene3D G3DSA:3.30.1490.20 113 195 1.4E-64 T 15-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Trad_1771 9d0f452dd711bdedfff29b780bbc9c3a 427 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 1 421 29.804 T 15-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 Trad_1771 9d0f452dd711bdedfff29b780bbc9c3a 427 Gene3D G3DSA:3.30.930.10 1 322 1.1E-100 T 15-10-2018 Trad_1771 9d0f452dd711bdedfff29b780bbc9c3a 427 Pfam PF13393 Histidyl-tRNA synthetase 8 311 7.1E-39 T 15-10-2018 Trad_1771 9d0f452dd711bdedfff29b780bbc9c3a 427 Pfam PF03129 Anticodon binding domain 331 417 1.4E-8 T 15-10-2018 IPR004154 Anticodon-binding Trad_1771 9d0f452dd711bdedfff29b780bbc9c3a 427 Gene3D G3DSA:3.40.50.800 323 416 7.5E-16 T 15-10-2018 IPR036621 Anticodon-binding domain superfamily Trad_1771 9d0f452dd711bdedfff29b780bbc9c3a 427 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 5 406 9.0E-128 T 15-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 Trad_1771 9d0f452dd711bdedfff29b780bbc9c3a 427 SUPERFAMILY SSF55681 3 319 3.06E-84 T 15-10-2018 Trad_1771 9d0f452dd711bdedfff29b780bbc9c3a 427 PIRSF PIRSF001549 1 419 6.9E-101 T 15-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Trad_1771 9d0f452dd711bdedfff29b780bbc9c3a 427 SUPERFAMILY SSF52954 327 419 4.58E-19 T 15-10-2018 Trad_1407 20102902f5be745e7e2bef50bd6a13b9 260 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 154 182 - T 15-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Trad_1407 20102902f5be745e7e2bef50bd6a13b9 260 Gene3D G3DSA:3.40.50.720 1 260 3.2E-79 T 15-10-2018 Trad_1407 20102902f5be745e7e2bef50bd6a13b9 260 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 14 188 0.0054 T 15-10-2018 Trad_1407 20102902f5be745e7e2bef50bd6a13b9 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 143 151 1.2E-13 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_1407 20102902f5be745e7e2bef50bd6a13b9 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 89 100 1.2E-13 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_1407 20102902f5be745e7e2bef50bd6a13b9 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 167 186 1.2E-13 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_1407 20102902f5be745e7e2bef50bd6a13b9 260 SUPERFAMILY SSF51735 9 259 3.4E-76 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_1407 20102902f5be745e7e2bef50bd6a13b9 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 188 205 3.8E-43 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_1407 20102902f5be745e7e2bef50bd6a13b9 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 221 241 3.8E-43 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_1407 20102902f5be745e7e2bef50bd6a13b9 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 186 3.8E-43 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_1407 20102902f5be745e7e2bef50bd6a13b9 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 89 100 3.8E-43 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_1407 20102902f5be745e7e2bef50bd6a13b9 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 137 153 3.8E-43 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_1407 20102902f5be745e7e2bef50bd6a13b9 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 15 32 3.8E-43 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_1407 20102902f5be745e7e2bef50bd6a13b9 260 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 22 258 7.0E-55 T 15-10-2018 Trad_0882 bc3f357858d98c916206f9dd4892775b 324 Pfam PF00512 His Kinase A (phospho-acceptor) domain 106 160 2.5E-11 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Trad_0882 bc3f357858d98c916206f9dd4892775b 324 SUPERFAMILY SSF47384 91 161 7.26E-14 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Trad_0882 bc3f357858d98c916206f9dd4892775b 324 SMART SM00387 207 315 5.1E-23 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Trad_0882 bc3f357858d98c916206f9dd4892775b 324 Gene3D G3DSA:3.30.565.10 163 313 9.3E-30 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Trad_0882 bc3f357858d98c916206f9dd4892775b 324 SUPERFAMILY SSF55874 168 313 8.25E-30 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Trad_0882 bc3f357858d98c916206f9dd4892775b 324 SMART SM00388 104 169 7.4E-11 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Trad_0882 bc3f357858d98c916206f9dd4892775b 324 SUPERFAMILY SSF55785 13 75 8.11E-6 T 15-10-2018 IPR035965 PAS domain superfamily Trad_0882 bc3f357858d98c916206f9dd4892775b 324 Gene3D G3DSA:1.10.287.130 97 162 7.5E-13 T 15-10-2018 Trad_0882 bc3f357858d98c916206f9dd4892775b 324 PRINTS PR00344 Bacterial sensor protein C-terminal signature 244 258 5.6E-9 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Trad_0882 bc3f357858d98c916206f9dd4892775b 324 PRINTS PR00344 Bacterial sensor protein C-terminal signature 262 272 5.6E-9 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Trad_0882 bc3f357858d98c916206f9dd4892775b 324 PRINTS PR00344 Bacterial sensor protein C-terminal signature 299 312 5.6E-9 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Trad_0882 bc3f357858d98c916206f9dd4892775b 324 PRINTS PR00344 Bacterial sensor protein C-terminal signature 276 294 5.6E-9 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Trad_0882 bc3f357858d98c916206f9dd4892775b 324 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 208 313 8.8E-14 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Trad_2042 cb4fd729ca2194b268846f90d75bee76 338 Gene3D G3DSA:3.60.110.10 4 263 1.1E-18 T 15-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Trad_2042 cb4fd729ca2194b268846f90d75bee76 338 Pfam PF00795 Carbon-nitrogen hydrolase 8 247 2.7E-13 T 15-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 Trad_2042 cb4fd729ca2194b268846f90d75bee76 338 SUPERFAMILY SSF56317 3 243 1.44E-22 T 15-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Trad_2209 2a561f19cd59a20ea9ba521dba631c82 311 Gene3D G3DSA:3.40.50.1820 32 311 5.0E-51 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold Trad_2209 2a561f19cd59a20ea9ba521dba631c82 311 Pfam PF12697 Alpha/beta hydrolase family 59 303 3.0E-17 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Trad_2209 2a561f19cd59a20ea9ba521dba631c82 311 PRINTS PR00111 Alpha/beta hydrolase fold signature 255 269 8.3E-12 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Trad_2209 2a561f19cd59a20ea9ba521dba631c82 311 PRINTS PR00111 Alpha/beta hydrolase fold signature 143 156 8.3E-12 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Trad_2209 2a561f19cd59a20ea9ba521dba631c82 311 PRINTS PR00111 Alpha/beta hydrolase fold signature 85 100 8.3E-12 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Trad_2209 2a561f19cd59a20ea9ba521dba631c82 311 PRINTS PR00111 Alpha/beta hydrolase fold signature 129 142 8.3E-12 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Trad_2209 2a561f19cd59a20ea9ba521dba631c82 311 SUPERFAMILY SSF53474 37 311 4.1E-52 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold Trad_2362 a92d36d50d93fb649ef4502e063485a3 391 SUPERFAMILY SSF56059 106 358 9.91E-10 T 15-10-2018 Trad_2362 a92d36d50d93fb649ef4502e063485a3 391 Pfam PF14397 Sugar-transfer associated ATP-grasp 106 363 3.7E-26 T 15-10-2018 IPR039523 Alpha-L-glutamate ligase-related protein, ATP-grasp domain KEGG: 00270+6.3.2.2+6.3.2.3|KEGG: 00480+6.3.2.2+6.3.2.3|MetaCyc: PWY-6840|MetaCyc: PWY-7255 Trad_0817 62662260920b3a050462b1abecb8ed65 535 Pfam PF02734 DAK2 domain 43 204 1.8E-39 T 15-10-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 Trad_0817 62662260920b3a050462b1abecb8ed65 535 SMART SM01120 43 206 2.4E-59 T 15-10-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 Trad_0817 62662260920b3a050462b1abecb8ed65 535 Pfam PF13684 Dihydroxyacetone kinase family 231 535 2.4E-85 T 15-10-2018 IPR033470 Uncharacterised protein, DhaK domain Trad_0817 62662260920b3a050462b1abecb8ed65 535 SMART SM01121 231 535 6.2E-115 T 15-10-2018 IPR033470 Uncharacterised protein, DhaK domain Trad_0817 62662260920b3a050462b1abecb8ed65 535 TIGRFAM TIGR03599 YloV: DAK2 domain fusion protein YloV 19 535 7.1E-169 T 15-10-2018 IPR019986 DAK2 domain-containing protein YloV Trad_0817 62662260920b3a050462b1abecb8ed65 535 SUPERFAMILY SSF101473 15 206 5.23E-40 T 15-10-2018 IPR036117 DhaL domain superfamily GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 Trad_0817 62662260920b3a050462b1abecb8ed65 535 Gene3D G3DSA:1.25.40.340 42 198 1.6E-10 T 15-10-2018 IPR036117 DhaL domain superfamily GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 Trad_1820 159b3993579ab146238b50389db5871e 381 Gene3D G3DSA:3.30.360.10 135 381 5.9E-32 T 15-10-2018 Trad_1820 159b3993579ab146238b50389db5871e 381 Gene3D G3DSA:3.40.50.720 1 134 2.1E-25 T 15-10-2018 Trad_1820 159b3993579ab146238b50389db5871e 381 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 5 124 9.9E-14 T 15-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 Trad_1820 159b3993579ab146238b50389db5871e 381 SUPERFAMILY SSF55347 139 309 3.11E-17 T 15-10-2018 Trad_1820 159b3993579ab146238b50389db5871e 381 SUPERFAMILY SSF51735 2 164 1.91E-29 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_0021 39c4fd5103f1bac5a8722c5b7df946fe 141 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 8 118 1.8E-43 T 15-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_0021 39c4fd5103f1bac5a8722c5b7df946fe 141 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 6 120 29.344 T 15-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_0021 39c4fd5103f1bac5a8722c5b7df946fe 141 Pfam PF01245 Ribosomal protein L19 8 118 7.4E-47 T 15-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_0021 39c4fd5103f1bac5a8722c5b7df946fe 141 SUPERFAMILY SSF50104 7 126 8.62E-45 T 15-10-2018 IPR008991 Translation protein SH3-like domain superfamily Trad_0021 39c4fd5103f1bac5a8722c5b7df946fe 141 ProSitePatterns PS01015 Ribosomal protein L19 signature. 92 107 - T 15-10-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Trad_0021 39c4fd5103f1bac5a8722c5b7df946fe 141 Gene3D G3DSA:2.30.30.790 13 124 1.0E-16 T 15-10-2018 IPR038657 Ribosomal protein L19 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_0021 39c4fd5103f1bac5a8722c5b7df946fe 141 PRINTS PR00061 Ribosomal protein L19 signature 8 37 3.8E-33 T 15-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_0021 39c4fd5103f1bac5a8722c5b7df946fe 141 PRINTS PR00061 Ribosomal protein L19 signature 94 119 3.8E-33 T 15-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_0021 39c4fd5103f1bac5a8722c5b7df946fe 141 PRINTS PR00061 Ribosomal protein L19 signature 38 67 3.8E-33 T 15-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_0021 39c4fd5103f1bac5a8722c5b7df946fe 141 PIRSF PIRSF002191 1 140 4.2E-51 T 15-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_2056 c7e2455da093a077a58c733f35848265 548 Gene3D G3DSA:1.20.1530.20 3 379 2.3E-73 T 15-10-2018 IPR038770 Sodium/solute symporter superfamily Trad_2056 c7e2455da093a077a58c733f35848265 548 Pfam PF00999 Sodium/hydrogen exchanger family 9 368 4.8E-54 T 15-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 Trad_2056 c7e2455da093a077a58c733f35848265 548 SUPERFAMILY SSF51735 410 537 1.48E-20 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_2056 c7e2455da093a077a58c733f35848265 548 Gene3D G3DSA:3.40.50.720 406 544 4.2E-29 T 15-10-2018 Trad_2056 c7e2455da093a077a58c733f35848265 548 Pfam PF02254 TrkA-N domain 411 525 4.3E-16 T 15-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 Trad_1477 bf8b2427ea95b44bf68d3686e7d3cd16 156 SUPERFAMILY SSF55961 4 144 1.12E-14 T 15-10-2018 Trad_1477 bf8b2427ea95b44bf68d3686e7d3cd16 156 Gene3D G3DSA:3.30.530.20 2 147 1.5E-19 T 15-10-2018 IPR023393 START-like domain superfamily Trad_1477 bf8b2427ea95b44bf68d3686e7d3cd16 156 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 3 113 1.6E-12 T 15-10-2018 IPR019587 Polyketide cyclase/dehydrase Trad_2010 243a0fbf6333a7038c4dd9ede5e75e0d 450 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 4 434 3.4E-103 T 15-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 Trad_2010 243a0fbf6333a7038c4dd9ede5e75e0d 450 Pfam PF00919 Uncharacterized protein family UPF0004 4 97 1.8E-20 T 15-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 Trad_2010 243a0fbf6333a7038c4dd9ede5e75e0d 450 Gene3D G3DSA:2.40.50.140 374 442 1.6E-16 T 15-10-2018 Trad_2010 243a0fbf6333a7038c4dd9ede5e75e0d 450 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 3 436 60.545 T 15-10-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 Trad_2010 243a0fbf6333a7038c4dd9ede5e75e0d 450 Gene3D G3DSA:3.40.50.12160 4 121 2.2E-27 T 15-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily Trad_2010 243a0fbf6333a7038c4dd9ede5e75e0d 450 Pfam PF01938 TRAM domain 371 437 3.6E-7 T 15-10-2018 IPR002792 TRAM domain Trad_2010 243a0fbf6333a7038c4dd9ede5e75e0d 450 SMART SM00729 134 359 3.2E-49 T 15-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Trad_2010 243a0fbf6333a7038c4dd9ede5e75e0d 450 SUPERFAMILY SSF102114 121 365 4.84E-46 T 15-10-2018 Trad_2010 243a0fbf6333a7038c4dd9ede5e75e0d 450 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 138 158 - T 15-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 Trad_2010 243a0fbf6333a7038c4dd9ede5e75e0d 450 Gene3D G3DSA:3.80.30.20 132 373 5.7E-67 T 15-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Trad_2010 243a0fbf6333a7038c4dd9ede5e75e0d 450 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 4 434 1.2E-174 T 15-10-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 Trad_2010 243a0fbf6333a7038c4dd9ede5e75e0d 450 Pfam PF04055 Radical SAM superfamily 140 317 3.6E-27 T 15-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Trad_1225 f195fb479a1a465f427c57cfdbdccf3c 345 TIGRFAM TIGR04382 myo_inos_iolC_N: 5-dehydro-2-deoxygluconokinase 12 338 1.1E-113 T 15-10-2018 IPR030830 5-Dehydro-2-deoxygluconokinase KEGG: 00562+2.7.1.92 Trad_1225 f195fb479a1a465f427c57cfdbdccf3c 345 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 283 296 - T 15-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 Trad_1225 f195fb479a1a465f427c57cfdbdccf3c 345 SUPERFAMILY SSF53613 11 339 2.96E-70 T 15-10-2018 IPR029056 Ribokinase-like Trad_1225 f195fb479a1a465f427c57cfdbdccf3c 345 Pfam PF00294 pfkB family carbohydrate kinase 15 327 2.7E-47 T 15-10-2018 IPR011611 Carbohydrate kinase PfkB Trad_1225 f195fb479a1a465f427c57cfdbdccf3c 345 Gene3D G3DSA:3.40.1190.20 15 321 2.0E-80 T 15-10-2018 IPR029056 Ribokinase-like Trad_1225 f195fb479a1a465f427c57cfdbdccf3c 345 Gene3D G3DSA:2.20.150.10 20 115 2.0E-80 T 15-10-2018 IPR023314 5-Dehydro-2-deoxygluconokinase-like superfamily KEGG: 00562+2.7.1.92 Trad_1370 211e420d2dd9aa4c09f1e10c0c46522a 537 SUPERFAMILY SSF51338 14 519 1.85E-16 T 15-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Trad_1370 211e420d2dd9aa4c09f1e10c0c46522a 537 Gene3D G3DSA:3.10.310.70 84 202 3.9E-136 T 15-10-2018 Trad_1370 211e420d2dd9aa4c09f1e10c0c46522a 537 Pfam PF07969 Amidohydrolase family 56 520 2.6E-90 T 15-10-2018 IPR013108 Amidohydrolase 3 Trad_1370 211e420d2dd9aa4c09f1e10c0c46522a 537 Gene3D G3DSA:3.20.20.140 66 486 3.9E-136 T 15-10-2018 Trad_1370 211e420d2dd9aa4c09f1e10c0c46522a 537 Gene3D G3DSA:2.30.40.10 14 503 3.9E-136 T 15-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Trad_1370 211e420d2dd9aa4c09f1e10c0c46522a 537 SUPERFAMILY SSF51556 65 486 7.74E-40 T 15-10-2018 IPR032466 Metal-dependent hydrolase Trad_0096 5bea6c1b4976d909e93caf10c6e62528 463 Gene3D G3DSA:3.40.50.1220 274 458 1.9E-81 T 15-10-2018 Trad_0096 5bea6c1b4976d909e93caf10c6e62528 463 PIRSF PIRSF000204 1 457 9.8E-181 T 15-10-2018 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 Trad_0096 5bea6c1b4976d909e93caf10c6e62528 463 SUPERFAMILY SSF52467 282 457 2.03E-70 T 15-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily Trad_0096 5bea6c1b4976d909e93caf10c6e62528 463 Pfam PF02233 NAD(P) transhydrogenase beta subunit 6 453 8.8E-185 T 15-10-2018 IPR034300 NADP transhydrogenase beta-like domain KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 Trad_0729 3afd80af80390b4a9e8bb1cbfa255004 386 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 340 356 1.1E-10 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Trad_0729 3afd80af80390b4a9e8bb1cbfa255004 386 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 326 340 1.1E-10 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Trad_0729 3afd80af80390b4a9e8bb1cbfa255004 386 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 356 368 1.1E-10 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Trad_0729 3afd80af80390b4a9e8bb1cbfa255004 386 Gene3D G3DSA:3.30.450.20 16 154 6.0E-17 T 15-10-2018 Trad_0729 3afd80af80390b4a9e8bb1cbfa255004 386 Gene3D G3DSA:3.30.450.20 155 278 1.7E-15 T 15-10-2018 Trad_0729 3afd80af80390b4a9e8bb1cbfa255004 386 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 18 145 2.7E-13 T 15-10-2018 IPR000014 PAS domain Trad_0729 3afd80af80390b4a9e8bb1cbfa255004 386 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 164 288 5.0E-15 T 15-10-2018 IPR000014 PAS domain Trad_0729 3afd80af80390b4a9e8bb1cbfa255004 386 ProSitePatterns PS00622 LuxR-type HTH domain signature. 340 367 - T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Trad_0729 3afd80af80390b4a9e8bb1cbfa255004 386 SUPERFAMILY SSF46894 317 385 1.43E-20 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Trad_0729 3afd80af80390b4a9e8bb1cbfa255004 386 Pfam PF00196 Bacterial regulatory proteins, luxR family 325 380 1.0E-19 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Trad_0729 3afd80af80390b4a9e8bb1cbfa255004 386 SMART SM00421 323 380 4.3E-25 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Trad_0729 3afd80af80390b4a9e8bb1cbfa255004 386 SUPERFAMILY SSF55785 158 279 2.27E-15 T 15-10-2018 IPR035965 PAS domain superfamily Trad_0729 3afd80af80390b4a9e8bb1cbfa255004 386 Pfam PF00989 PAS fold 169 220 1.7E-6 T 15-10-2018 IPR013767 PAS fold GO:0006355 Trad_0729 3afd80af80390b4a9e8bb1cbfa255004 386 SMART SM00091 168 234 1.8E-5 T 15-10-2018 IPR000014 PAS domain Trad_0729 3afd80af80390b4a9e8bb1cbfa255004 386 SMART SM00091 19 88 1.7E-4 T 15-10-2018 IPR000014 PAS domain Trad_0729 3afd80af80390b4a9e8bb1cbfa255004 386 Pfam PF13426 PAS domain 32 136 2.8E-6 T 15-10-2018 IPR000014 PAS domain Trad_0729 3afd80af80390b4a9e8bb1cbfa255004 386 Gene3D G3DSA:1.10.10.10 279 385 7.0E-30 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Trad_0729 3afd80af80390b4a9e8bb1cbfa255004 386 SUPERFAMILY SSF55785 32 147 9.77E-15 T 15-10-2018 IPR035965 PAS domain superfamily Trad_2882 37185e643152c0e64680b05738fa96ac 693 SUPERFAMILY SSF50952 265 554 1.96E-11 T 15-10-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 Trad_2882 37185e643152c0e64680b05738fa96ac 693 Pfam PF13205 Bacterial Ig-like domain 31 135 2.4E-16 T 15-10-2018 IPR032812 SbsA, Ig-like domain Trad_2882 37185e643152c0e64680b05738fa96ac 693 Pfam PF13205 Bacterial Ig-like domain 139 244 1.5E-13 T 15-10-2018 IPR032812 SbsA, Ig-like domain Trad_2882 37185e643152c0e64680b05738fa96ac 693 Gene3D G3DSA:2.120.10.30 246 494 6.6E-15 T 15-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like Trad_2882 37185e643152c0e64680b05738fa96ac 693 Gene3D G3DSA:2.60.40.1220 169 244 1.2E-7 T 15-10-2018 Trad_0669 ac9553f4557a8cf63d6e210979c31429 521 Gene3D G3DSA:3.30.300.310 421 521 1.9E-36 T 15-10-2018 Trad_0669 ac9553f4557a8cf63d6e210979c31429 521 SUPERFAMILY SSF56801 3 518 1.57E-168 T 15-10-2018 Trad_0669 ac9553f4557a8cf63d6e210979c31429 521 Pfam PF00501 AMP-binding enzyme 9 425 2.7E-116 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Trad_0669 ac9553f4557a8cf63d6e210979c31429 521 ProSitePatterns PS00455 Putative AMP-binding domain signature. 174 185 - T 15-10-2018 IPR020845 AMP-binding, conserved site Trad_0669 ac9553f4557a8cf63d6e210979c31429 521 Gene3D G3DSA:3.40.50.12780 1 418 1.8E-130 T 15-10-2018 Trad_0669 ac9553f4557a8cf63d6e210979c31429 521 Pfam PF13193 AMP-binding enzyme C-terminal domain 434 509 2.7E-21 T 15-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Trad_2314 8c8e2cb1905e49386abef0b3d6bd843f 278 Pfam PF01551 Peptidase family M23 168 263 6.7E-30 T 15-10-2018 IPR016047 Peptidase M23 Trad_2314 8c8e2cb1905e49386abef0b3d6bd843f 278 SUPERFAMILY SSF54106 32 80 1.7E-5 T 15-10-2018 Trad_2314 8c8e2cb1905e49386abef0b3d6bd843f 278 SUPERFAMILY SSF51261 135 267 9.42E-47 T 15-10-2018 IPR011055 Duplicated hybrid motif Trad_2314 8c8e2cb1905e49386abef0b3d6bd843f 278 Pfam PF01476 LysM domain 34 80 2.7E-6 T 15-10-2018 IPR018392 LysM domain Trad_2314 8c8e2cb1905e49386abef0b3d6bd843f 278 Gene3D G3DSA:2.70.70.10 130 272 1.3E-43 T 15-10-2018 IPR011055 Duplicated hybrid motif Trad_2314 8c8e2cb1905e49386abef0b3d6bd843f 278 SMART SM00257 33 80 9.3E-4 T 15-10-2018 IPR018392 LysM domain Trad_2314 8c8e2cb1905e49386abef0b3d6bd843f 278 Gene3D G3DSA:3.10.350.10 23 86 6.2E-8 T 15-10-2018 IPR036779 LysM domain superfamily Trad_0228 5abf88fcfd480851b5f9f2ab748f4870 403 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 172 287 5.5E-19 T 15-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase Trad_0228 5abf88fcfd480851b5f9f2ab748f4870 403 Gene3D G3DSA:3.30.460.30 1 149 6.8E-24 T 15-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Trad_0228 5abf88fcfd480851b5f9f2ab748f4870 403 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 7 145 1.2E-20 T 15-10-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Trad_0228 5abf88fcfd480851b5f9f2ab748f4870 403 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 3 381 17.322 T 15-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Trad_0228 5abf88fcfd480851b5f9f2ab748f4870 403 SUPERFAMILY SSF69742 4 147 2.35E-24 T 15-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Trad_0228 5abf88fcfd480851b5f9f2ab748f4870 403 Gene3D G3DSA:3.40.50.720 154 295 3.8E-24 T 15-10-2018 Trad_0228 5abf88fcfd480851b5f9f2ab748f4870 403 SUPERFAMILY SSF51735 169 287 2.95E-20 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_0641 deb5554716355e67bcbe55324c82fd28 307 Gene3D G3DSA:3.40.50.1370 6 301 6.6E-87 T 15-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 Trad_0641 deb5554716355e67bcbe55324c82fd28 307 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 51 58 - T 15-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Trad_0641 deb5554716355e67bcbe55324c82fd28 307 SUPERFAMILY SSF53671 3 303 1.44E-92 T 15-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 Trad_0641 deb5554716355e67bcbe55324c82fd28 307 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 156 301 2.6E-27 T 15-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 Trad_0641 deb5554716355e67bcbe55324c82fd28 307 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 5 147 2.3E-38 T 15-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 Trad_0641 deb5554716355e67bcbe55324c82fd28 307 PRINTS PR00101 Aspartate carbamoyltransferase signature 41 63 3.9E-29 T 15-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Trad_0641 deb5554716355e67bcbe55324c82fd28 307 PRINTS PR00101 Aspartate carbamoyltransferase signature 219 228 3.9E-29 T 15-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Trad_0641 deb5554716355e67bcbe55324c82fd28 307 PRINTS PR00101 Aspartate carbamoyltransferase signature 284 298 3.9E-29 T 15-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Trad_0641 deb5554716355e67bcbe55324c82fd28 307 PRINTS PR00101 Aspartate carbamoyltransferase signature 260 265 3.9E-29 T 15-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Trad_0641 deb5554716355e67bcbe55324c82fd28 307 PRINTS PR00101 Aspartate carbamoyltransferase signature 134 151 3.9E-29 T 15-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Trad_0641 deb5554716355e67bcbe55324c82fd28 307 PRINTS PR00101 Aspartate carbamoyltransferase signature 79 88 3.9E-29 T 15-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Trad_0641 deb5554716355e67bcbe55324c82fd28 307 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 256 265 2.0E-17 T 15-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Trad_0641 deb5554716355e67bcbe55324c82fd28 307 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 268 291 2.0E-17 T 15-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Trad_0641 deb5554716355e67bcbe55324c82fd28 307 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 2.0E-17 T 15-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Trad_0641 deb5554716355e67bcbe55324c82fd28 307 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 51 70 2.0E-17 T 15-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Trad_0641 deb5554716355e67bcbe55324c82fd28 307 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 5 303 1.4E-87 T 15-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Trad_0641 deb5554716355e67bcbe55324c82fd28 307 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 4 305 38.032 T 15-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Trad_0641 deb5554716355e67bcbe55324c82fd28 307 Gene3D G3DSA:3.40.50.1370 135 290 6.6E-87 T 15-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 Trad_2351 5287a5cb1354e1e0b97811035dcd7444 365 SMART SM00382 28 211 9.7E-11 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_2351 5287a5cb1354e1e0b97811035dcd7444 365 Pfam PF03459 TOBE domain 296 352 2.2E-12 T 15-10-2018 IPR005116 Transport-associated OB, type 1 Trad_2351 5287a5cb1354e1e0b97811035dcd7444 365 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Trad_2351 5287a5cb1354e1e0b97811035dcd7444 365 Pfam PF00005 ABC transporter 20 161 1.1E-28 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Trad_2351 5287a5cb1354e1e0b97811035dcd7444 365 Gene3D G3DSA:2.40.50.100 239 355 1.5E-23 T 15-10-2018 Trad_2351 5287a5cb1354e1e0b97811035dcd7444 365 Gene3D G3DSA:2.40.50.140 281 347 1.5E-23 T 15-10-2018 Trad_2351 5287a5cb1354e1e0b97811035dcd7444 365 SUPERFAMILY SSF50331 236 362 5.77E-26 T 15-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal Trad_2351 5287a5cb1354e1e0b97811035dcd7444 365 Gene3D G3DSA:3.40.50.300 1 238 2.4E-72 T 15-10-2018 Trad_2351 5287a5cb1354e1e0b97811035dcd7444 365 SUPERFAMILY SSF52540 5 241 6.33E-85 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_2290 d0410cc49759f787b52d626c5ee15cbe 338 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 237 324 2.4E-25 T 15-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Trad_2290 d0410cc49759f787b52d626c5ee15cbe 338 SUPERFAMILY SSF52540 7 256 1.03E-72 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_2290 d0410cc49759f787b52d626c5ee15cbe 338 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 238 305 2.8E-18 T 15-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Trad_2290 d0410cc49759f787b52d626c5ee15cbe 338 Gene3D G3DSA:3.40.50.300 5 336 9.1E-102 T 15-10-2018 Trad_2290 d0410cc49759f787b52d626c5ee15cbe 338 ProSitePatterns PS00211 ABC transporters family signature. 159 173 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Trad_2290 d0410cc49759f787b52d626c5ee15cbe 338 SMART SM00382 36 236 3.4E-16 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_2290 d0410cc49759f787b52d626c5ee15cbe 338 Pfam PF00005 ABC transporter 28 186 7.8E-28 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Trad_1637 ede51e1fef42c681e21021f542ecfd0a 310 Pfam PF04041 beta-1,4-mannooligosaccharide phosphorylase 25 303 2.4E-49 T 15-10-2018 IPR007184 Mannoside phosphorylase Trad_1637 ede51e1fef42c681e21021f542ecfd0a 310 Gene3D G3DSA:2.115.10.20 1 306 1.8E-98 T 15-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily Trad_1637 ede51e1fef42c681e21021f542ecfd0a 310 PIRSF PIRSF016202 1 308 1.9E-94 T 15-10-2018 IPR007184 Mannoside phosphorylase Trad_1637 ede51e1fef42c681e21021f542ecfd0a 310 SUPERFAMILY SSF75005 3 295 6.63E-75 T 15-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily Trad_2187 3626641e3d46c95a53747d1812d095e2 900 SUPERFAMILY SSF52922 717 898 5.76E-46 T 15-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Trad_2187 3626641e3d46c95a53747d1812d095e2 900 Gene3D G3DSA:3.40.50.970 480 712 7.7E-102 T 15-10-2018 Trad_2187 3626641e3d46c95a53747d1812d095e2 900 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 16 898 0.0 T 15-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 Trad_2187 3626641e3d46c95a53747d1812d095e2 900 PIRSF PIRSF000156 6 900 0.0 T 15-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 Trad_2187 3626641e3d46c95a53747d1812d095e2 900 SUPERFAMILY SSF52518 481 708 1.18E-88 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold Trad_2187 3626641e3d46c95a53747d1812d095e2 900 SUPERFAMILY SSF52518 66 474 3.61E-123 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold Trad_2187 3626641e3d46c95a53747d1812d095e2 900 Gene3D G3DSA:3.40.50.970 65 479 4.9E-120 T 15-10-2018 Trad_2187 3626641e3d46c95a53747d1812d095e2 900 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 144 305 3.1E-7 T 15-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Trad_2187 3626641e3d46c95a53747d1812d095e2 900 Gene3D G3DSA:3.40.50.920 719 900 1.1E-63 T 15-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Trad_0577 7582b527ef7ce68803977dca5e762f22 340 SUPERFAMILY SSF48179 189 339 1.53E-49 T 15-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Trad_0577 7582b527ef7ce68803977dca5e762f22 340 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 197 218 - T 15-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Trad_0577 7582b527ef7ce68803977dca5e762f22 340 SUPERFAMILY SSF51735 12 189 2.68E-46 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_0577 7582b527ef7ce68803977dca5e762f22 340 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 189 327 1.2E-48 T 15-10-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Trad_0577 7582b527ef7ce68803977dca5e762f22 340 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 15 165 5.9E-43 T 15-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Trad_0577 7582b527ef7ce68803977dca5e762f22 340 Gene3D G3DSA:3.40.50.720 2 196 6.4E-57 T 15-10-2018 Trad_0577 7582b527ef7ce68803977dca5e762f22 340 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 13 330 35.707 T 15-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Trad_0577 7582b527ef7ce68803977dca5e762f22 340 Gene3D G3DSA:1.10.1040.10 198 340 6.6E-49 T 15-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 Trad_0577 7582b527ef7ce68803977dca5e762f22 340 PIRSF PIRSF000114 7 340 1.4E-95 T 15-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Trad_0577 7582b527ef7ce68803977dca5e762f22 340 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 182 206 3.0E-47 T 15-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Trad_0577 7582b527ef7ce68803977dca5e762f22 340 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 142 162 3.0E-47 T 15-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Trad_0577 7582b527ef7ce68803977dca5e762f22 340 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 207 231 3.0E-47 T 15-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Trad_0577 7582b527ef7ce68803977dca5e762f22 340 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 17 34 3.0E-47 T 15-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Trad_0577 7582b527ef7ce68803977dca5e762f22 340 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 247 264 3.0E-47 T 15-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Trad_0577 7582b527ef7ce68803977dca5e762f22 340 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 68 95 3.0E-47 T 15-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Trad_0761 0f3fee66c3729d7a4a889c122779e2cd 214 SMART SM00478 44 191 3.6E-61 T 15-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 Trad_0761 0f3fee66c3729d7a4a889c122779e2cd 214 ProSitePatterns PS01155 Endonuclease III family signature. 108 137 - T 15-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 Trad_0761 0f3fee66c3729d7a4a889c122779e2cd 214 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 40 175 4.7E-22 T 15-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 Trad_0761 0f3fee66c3729d7a4a889c122779e2cd 214 TIGRFAM TIGR01083 nth: endonuclease III 11 200 1.4E-77 T 15-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 Trad_0761 0f3fee66c3729d7a4a889c122779e2cd 214 Hamap MF_00942 Endonuclease III [nth]. 1 214 37.166 T 15-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 Trad_0761 0f3fee66c3729d7a4a889c122779e2cd 214 Gene3D G3DSA:1.10.1670.10 17 209 3.3E-75 T 15-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 Trad_0761 0f3fee66c3729d7a4a889c122779e2cd 214 Gene3D G3DSA:1.10.340.30 27 138 3.3E-75 T 15-10-2018 Trad_0761 0f3fee66c3729d7a4a889c122779e2cd 214 PIRSF PIRSF001435 9 214 1.7E-48 T 15-10-2018 Trad_0761 0f3fee66c3729d7a4a889c122779e2cd 214 SUPERFAMILY SSF48150 10 213 8.48E-70 T 15-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 Trad_0174 da087343b52d8e15afaa1d9b445ffd52 227 Gene3D G3DSA:3.40.50.1360 7 220 9.0E-68 T 15-10-2018 Trad_0174 da087343b52d8e15afaa1d9b445ffd52 227 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 3 224 28.722 T 15-10-2018 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 Trad_0174 da087343b52d8e15afaa1d9b445ffd52 227 Gene3D G3DSA:3.30.70.260 128 204 9.0E-68 T 15-10-2018 Trad_0174 da087343b52d8e15afaa1d9b445ffd52 227 SUPERFAMILY SSF100950 5 178 2.83E-33 T 15-10-2018 IPR037171 NagB/RpiA transferase-like Trad_0174 da087343b52d8e15afaa1d9b445ffd52 227 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 6 221 6.7E-64 T 15-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 Trad_0174 da087343b52d8e15afaa1d9b445ffd52 227 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 55 220 6.9E-53 T 15-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 Trad_0174 da087343b52d8e15afaa1d9b445ffd52 227 SUPERFAMILY SSF75445 132 207 1.01E-20 T 15-10-2018 Trad_0540 1089f21a6a19d656d643e9c3645eaddc 198 Gene3D G3DSA:2.40.500.20 87 198 1.3E-51 T 15-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Trad_0540 1089f21a6a19d656d643e9c3645eaddc 198 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 160 167 - T 15-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Trad_0540 1089f21a6a19d656d643e9c3645eaddc 198 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 85 2.7E-30 T 15-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Trad_0540 1089f21a6a19d656d643e9c3645eaddc 198 Gene3D G3DSA:1.10.287.990 20 86 3.5E-26 T 15-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Trad_0540 1089f21a6a19d656d643e9c3645eaddc 198 SUPERFAMILY SSF46609 1 87 1.27E-33 T 15-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Trad_0540 1089f21a6a19d656d643e9c3645eaddc 198 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 93 192 1.8E-42 T 15-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Trad_0540 1089f21a6a19d656d643e9c3645eaddc 198 PIRSF PIRSF000349 1 198 8.6E-85 T 15-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Trad_0540 1089f21a6a19d656d643e9c3645eaddc 198 PRINTS PR01703 Manganese superoxide dismutase signature 158 170 3.0E-25 T 15-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Trad_0540 1089f21a6a19d656d643e9c3645eaddc 198 PRINTS PR01703 Manganese superoxide dismutase signature 69 82 3.0E-25 T 15-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Trad_0540 1089f21a6a19d656d643e9c3645eaddc 198 PRINTS PR01703 Manganese superoxide dismutase signature 122 130 3.0E-25 T 15-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Trad_0540 1089f21a6a19d656d643e9c3645eaddc 198 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 3.0E-25 T 15-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Trad_0540 1089f21a6a19d656d643e9c3645eaddc 198 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 3.0E-25 T 15-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Trad_0540 1089f21a6a19d656d643e9c3645eaddc 198 SUPERFAMILY SSF54719 89 196 5.89E-47 T 15-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Trad_2034 1acf3b02fb76d02ae42c7153c3219590 180 Pfam PF07920 Protein of unknown function (DUF1684) 32 172 6.4E-46 T 15-10-2018 IPR012467 Protein of unknown function DUF1684 Trad_1127 116491e5d35eb8d35fcbc4fcc840c0c7 369 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 29 76 2.8E-11 T 15-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain Trad_1127 116491e5d35eb8d35fcbc4fcc840c0c7 369 SUPERFAMILY SSF161098 162 350 9.16E-32 T 15-10-2018 IPR035906 MetI-like superfamily Trad_1127 116491e5d35eb8d35fcbc4fcc840c0c7 369 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 185 367 3.2E-33 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Trad_1127 116491e5d35eb8d35fcbc4fcc840c0c7 369 Gene3D G3DSA:1.10.3720.10 157 364 5.6E-25 T 15-10-2018 IPR035906 MetI-like superfamily Trad_0651 15b469041316649f9cf4c3af6242d756 546 SUPERFAMILY SSF52096 61 246 3.84E-17 T 15-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Trad_0651 15b469041316649f9cf4c3af6242d756 546 Pfam PF01343 Peptidase family S49 106 250 7.8E-18 T 15-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 Trad_0651 15b469041316649f9cf4c3af6242d756 546 Pfam PF01343 Peptidase family S49 348 498 2.3E-38 T 15-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 Trad_0651 15b469041316649f9cf4c3af6242d756 546 Gene3D G3DSA:3.40.1750.10 153 454 5.8E-111 T 15-10-2018 Trad_0651 15b469041316649f9cf4c3af6242d756 546 PIRSF PIRSF001217 6 515 6.1E-127 T 15-10-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 Trad_0651 15b469041316649f9cf4c3af6242d756 546 Gene3D G3DSA:3.90.226.10 63 264 5.8E-111 T 15-10-2018 Trad_0651 15b469041316649f9cf4c3af6242d756 546 SUPERFAMILY SSF52096 261 484 6.46E-38 T 15-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Trad_0651 15b469041316649f9cf4c3af6242d756 546 Gene3D G3DSA:3.90.226.10 265 496 5.8E-111 T 15-10-2018 Trad_2876 fa37f565bbfc6af1f21ac7e4da9f0090 610 Pfam PF14742 N-terminal domain of (some) glycogen debranching enzymes 9 188 3.2E-34 T 15-10-2018 IPR032856 Putative glycogen debranching enzyme, N-terminal Trad_2876 fa37f565bbfc6af1f21ac7e4da9f0090 610 SUPERFAMILY SSF48208 244 608 1.51E-68 T 15-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 Trad_2876 fa37f565bbfc6af1f21ac7e4da9f0090 610 Gene3D G3DSA:1.50.10.10 232 610 7.9E-54 T 15-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 Trad_2876 fa37f565bbfc6af1f21ac7e4da9f0090 610 Pfam PF06202 Amylo-alpha-1,6-glucosidase 245 605 3.6E-10 T 15-10-2018 IPR032790 Glycogen debranching enzyme, C-terminal KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-6798695|Reactome: R-HSA-70221 Trad_0795 d83805bb4e70e99bd468bd6017e40d75 130 Pfam PF12680 SnoaL-like domain 11 112 2.5E-14 T 15-10-2018 IPR037401 SnoaL-like domain Trad_0795 d83805bb4e70e99bd468bd6017e40d75 130 SUPERFAMILY SSF54427 7 124 4.62E-24 T 15-10-2018 IPR032710 NTF2-like domain superfamily Trad_0795 d83805bb4e70e99bd468bd6017e40d75 130 Gene3D G3DSA:3.10.450.50 5 126 4.4E-26 T 15-10-2018 Trad_0272 b360fabf72648f9052e155621989c8af 409 Gene3D G3DSA:3.40.1830.10 1 178 2.4E-59 T 15-10-2018 IPR035097 Peptidase M29, N-terminal Trad_0272 b360fabf72648f9052e155621989c8af 409 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 14 31 3.0E-73 T 15-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 Trad_0272 b360fabf72648f9052e155621989c8af 409 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 362 384 3.0E-73 T 15-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 Trad_0272 b360fabf72648f9052e155621989c8af 409 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 323 344 3.0E-73 T 15-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 Trad_0272 b360fabf72648f9052e155621989c8af 409 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 79 98 3.0E-73 T 15-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 Trad_0272 b360fabf72648f9052e155621989c8af 409 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 155 177 3.0E-73 T 15-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 Trad_0272 b360fabf72648f9052e155621989c8af 409 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 300 320 3.0E-73 T 15-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 Trad_0272 b360fabf72648f9052e155621989c8af 409 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 388 407 3.0E-73 T 15-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 Trad_0272 b360fabf72648f9052e155621989c8af 409 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 244 263 3.0E-73 T 15-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 Trad_0272 b360fabf72648f9052e155621989c8af 409 SUPERFAMILY SSF144052 3 408 4.45E-138 T 15-10-2018 Trad_0272 b360fabf72648f9052e155621989c8af 409 Pfam PF02073 Thermophilic metalloprotease (M29) 4 407 9.5E-163 T 15-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 Trad_2400 3dc9d71f0dd98ed2e9b9895c76557f9f 399 SUPERFAMILY SSF63829 39 317 3.27E-12 T 15-10-2018 Trad_2400 3dc9d71f0dd98ed2e9b9895c76557f9f 399 Gene3D G3DSA:2.120.10.30 100 376 2.1E-6 T 15-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like Trad_1523 52289912c064c29de704b7d1142dea69 489 TIGRFAM TIGR00873 gnd: 6-phosphogluconate dehydrogenase (decarboxylating) 14 477 3.4E-220 T 15-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Trad_1523 52289912c064c29de704b7d1142dea69 489 SMART SM01350 187 477 3.6E-206 T 15-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Trad_1523 52289912c064c29de704b7d1142dea69 489 SUPERFAMILY SSF48179 185 480 6.24E-122 T 15-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Trad_1523 52289912c064c29de704b7d1142dea69 489 Gene3D G3DSA:1.10.1040.10 189 442 1.8E-105 T 15-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 Trad_1523 52289912c064c29de704b7d1142dea69 489 Gene3D G3DSA:1.20.5.320 445 486 3.3E-17 T 15-10-2018 Trad_1523 52289912c064c29de704b7d1142dea69 489 PIRSF PIRSF000109 8 485 2.5E-219 T 15-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Trad_1523 52289912c064c29de704b7d1142dea69 489 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 187 476 4.4E-123 T 15-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Trad_1523 52289912c064c29de704b7d1142dea69 489 Gene3D G3DSA:3.40.50.720 7 188 1.6E-55 T 15-10-2018 Trad_1523 52289912c064c29de704b7d1142dea69 489 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 364 386 1.2E-81 T 15-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Trad_1523 52289912c064c29de704b7d1142dea69 489 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 128 153 1.2E-81 T 15-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Trad_1523 52289912c064c29de704b7d1142dea69 489 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 12 35 1.2E-81 T 15-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Trad_1523 52289912c064c29de704b7d1142dea69 489 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 176 204 1.2E-81 T 15-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Trad_1523 52289912c064c29de704b7d1142dea69 489 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 257 284 1.2E-81 T 15-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Trad_1523 52289912c064c29de704b7d1142dea69 489 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 75 104 1.2E-81 T 15-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Trad_1523 52289912c064c29de704b7d1142dea69 489 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 14 177 2.6E-50 T 15-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 Trad_1523 52289912c064c29de704b7d1142dea69 489 SUPERFAMILY SSF51735 12 185 1.69E-54 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_1523 52289912c064c29de704b7d1142dea69 489 ProSitePatterns PS00461 6-phosphogluconate dehydrogenase signature. 261 273 - T 15-10-2018 IPR006184 6-phosphogluconate-binding site GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Trad_2626 28d14cee6252ecd049c7ad4bfd8b7a8d 658 Pfam PF00563 EAL domain 392 630 1.7E-71 T 15-10-2018 IPR001633 EAL domain Trad_2626 28d14cee6252ecd049c7ad4bfd8b7a8d 658 SMART SM00052 386 635 6.1E-109 T 15-10-2018 IPR001633 EAL domain Trad_2626 28d14cee6252ecd049c7ad4bfd8b7a8d 658 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 206 374 2.6E-37 T 15-10-2018 IPR000160 GGDEF domain Trad_2626 28d14cee6252ecd049c7ad4bfd8b7a8d 658 SUPERFAMILY SSF141868 391 642 2.62E-87 T 15-10-2018 IPR035919 EAL domain superfamily Trad_2626 28d14cee6252ecd049c7ad4bfd8b7a8d 658 Pfam PF00990 Diguanylate cyclase, GGDEF domain 210 371 1.3E-39 T 15-10-2018 IPR000160 GGDEF domain Trad_2626 28d14cee6252ecd049c7ad4bfd8b7a8d 658 SMART SM00267 199 376 3.1E-51 T 15-10-2018 IPR000160 GGDEF domain Trad_2626 28d14cee6252ecd049c7ad4bfd8b7a8d 658 Gene3D G3DSA:3.20.20.450 390 651 3.7E-96 T 15-10-2018 IPR035919 EAL domain superfamily Trad_2626 28d14cee6252ecd049c7ad4bfd8b7a8d 658 SUPERFAMILY SSF55073 215 376 7.06E-45 T 15-10-2018 IPR029787 Nucleotide cyclase Trad_2626 28d14cee6252ecd049c7ad4bfd8b7a8d 658 Gene3D G3DSA:3.30.70.270 205 389 4.4E-52 T 15-10-2018 Trad_2940 edac94609d0e362b0ce56bdc97fb4bd4 270 Pfam PF00248 Aldo/keto reductase family 14 253 1.8E-53 T 15-10-2018 IPR023210 NADP-dependent oxidoreductase domain Trad_2940 edac94609d0e362b0ce56bdc97fb4bd4 270 PRINTS PR00069 Aldo-keto reductase signature 189 213 1.0E-36 T 15-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Trad_2940 edac94609d0e362b0ce56bdc97fb4bd4 270 PRINTS PR00069 Aldo-keto reductase signature 152 181 1.0E-36 T 15-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Trad_2940 edac94609d0e362b0ce56bdc97fb4bd4 270 PRINTS PR00069 Aldo-keto reductase signature 33 57 1.0E-36 T 15-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Trad_2940 edac94609d0e362b0ce56bdc97fb4bd4 270 PRINTS PR00069 Aldo-keto reductase signature 89 107 1.0E-36 T 15-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Trad_2940 edac94609d0e362b0ce56bdc97fb4bd4 270 PIRSF PIRSF000097 108 267 3.9E-32 T 15-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Trad_2940 edac94609d0e362b0ce56bdc97fb4bd4 270 PIRSF PIRSF000097 3 114 9.9E-31 T 15-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Trad_2940 edac94609d0e362b0ce56bdc97fb4bd4 270 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 120 137 - T 15-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 Trad_2940 edac94609d0e362b0ce56bdc97fb4bd4 270 SUPERFAMILY SSF51430 5 262 1.7E-86 T 15-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Trad_2940 edac94609d0e362b0ce56bdc97fb4bd4 270 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 37 54 - T 15-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 Trad_2940 edac94609d0e362b0ce56bdc97fb4bd4 270 Gene3D G3DSA:3.20.20.100 1 265 3.7E-97 T 15-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Trad_2051 49cd24225d0c1038cf52d00751665ed6 461 Gene3D G3DSA:2.30.30.60 284 333 2.3E-20 T 15-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily Trad_2051 49cd24225d0c1038cf52d00751665ed6 461 Pfam PF00924 Mechanosensitive ion channel 229 426 2.1E-44 T 15-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 Trad_2051 49cd24225d0c1038cf52d00751665ed6 461 SUPERFAMILY SSF82861 188 267 7.45E-10 T 15-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 Trad_2051 49cd24225d0c1038cf52d00751665ed6 461 SUPERFAMILY SSF82689 332 436 1.83E-22 T 15-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 Trad_2051 49cd24225d0c1038cf52d00751665ed6 461 SUPERFAMILY SSF50182 269 327 1.77E-14 T 15-10-2018 IPR010920 LSM domain superfamily Trad_2051 49cd24225d0c1038cf52d00751665ed6 461 Gene3D G3DSA:3.30.70.100 334 424 7.0E-28 T 15-10-2018 Trad_0759 38e20244e13298ad2962cc1ce1e8183b 177 Pfam PF08445 FR47-like protein 84 147 1.8E-16 T 15-10-2018 IPR013653 FR47-like GO:0016747 Trad_0759 38e20244e13298ad2962cc1ce1e8183b 177 Gene3D G3DSA:3.40.630.30 1 170 1.6E-43 T 15-10-2018 Trad_0759 38e20244e13298ad2962cc1ce1e8183b 177 SUPERFAMILY SSF55729 1 165 5.65E-30 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase Trad_0671 db619be3a7a84262ff2152d07031036f 348 SUPERFAMILY SSF81345 14 344 1.96E-82 T 15-10-2018 IPR037294 ABC transporter, BtuC-like Trad_0671 db619be3a7a84262ff2152d07031036f 348 Pfam PF01032 FecCD transport family 28 343 1.0E-93 T 15-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 Trad_0671 db619be3a7a84262ff2152d07031036f 348 Gene3D G3DSA:1.10.3470.10 16 347 3.1E-104 T 15-10-2018 IPR037294 ABC transporter, BtuC-like Trad_0389 3ac7a681c2f76a9103d06c286a7f5b63 75 SUPERFAMILY SSF143800 1 74 4.71E-16 T 15-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_0389 3ac7a681c2f76a9103d06c286a7f5b63 75 Pfam PF00830 Ribosomal L28 family 3 71 7.3E-19 T 15-10-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_0389 3ac7a681c2f76a9103d06c286a7f5b63 75 Gene3D G3DSA:2.30.170.40 41 73 3.7E-10 T 15-10-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_0389 3ac7a681c2f76a9103d06c286a7f5b63 75 Gene3D G3DSA:2.20.150.30 1 40 3.0E-18 T 15-10-2018 Trad_2170 b57989499294690e741243de7e24b734 287 SUPERFAMILY SSF52821 6 161 1.44E-42 T 15-10-2018 IPR036873 Rhodanese-like domain superfamily Trad_2170 b57989499294690e741243de7e24b734 287 SMART SM00450 12 140 4.4E-21 T 15-10-2018 IPR001763 Rhodanese-like domain Trad_2170 b57989499294690e741243de7e24b734 287 SMART SM00450 163 279 5.0E-18 T 15-10-2018 IPR001763 Rhodanese-like domain Trad_2170 b57989499294690e741243de7e24b734 287 SUPERFAMILY SSF52821 166 285 2.1E-31 T 15-10-2018 IPR036873 Rhodanese-like domain superfamily Trad_2170 b57989499294690e741243de7e24b734 287 Gene3D G3DSA:3.40.250.10 1 156 1.4E-48 T 15-10-2018 IPR036873 Rhodanese-like domain superfamily Trad_2170 b57989499294690e741243de7e24b734 287 ProSitePatterns PS00380 Rhodanese signature 1. 45 56 - T 15-10-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927|Reactome: R-HSA-1614558 Trad_2170 b57989499294690e741243de7e24b734 287 Gene3D G3DSA:3.40.250.10 157 287 3.3E-34 T 15-10-2018 IPR036873 Rhodanese-like domain superfamily Trad_2170 b57989499294690e741243de7e24b734 287 Pfam PF00581 Rhodanese-like domain 166 275 8.5E-12 T 15-10-2018 IPR001763 Rhodanese-like domain Trad_2170 b57989499294690e741243de7e24b734 287 Pfam PF00581 Rhodanese-like domain 13 136 3.2E-19 T 15-10-2018 IPR001763 Rhodanese-like domain Trad_1867 1747f7d79f3e7116b8224ca520b1e15f 228 SMART SM00986 47 218 2.2E-25 T 15-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Trad_1867 1747f7d79f3e7116b8224ca520b1e15f 228 Pfam PF03167 Uracil DNA glycosylase superfamily 47 218 3.2E-29 T 15-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Trad_1867 1747f7d79f3e7116b8224ca520b1e15f 228 SMART SM00987 47 218 2.2E-25 T 15-10-2018 Trad_1867 1747f7d79f3e7116b8224ca520b1e15f 228 Gene3D G3DSA:3.40.470.10 8 227 5.9E-65 T 15-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Trad_1867 1747f7d79f3e7116b8224ca520b1e15f 228 SUPERFAMILY SSF52141 15 223 9.48E-47 T 15-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Trad_1695 4a122ca0c3ebf13867bcce0d0b30d3a4 517 SMART SM00382 44 231 6.5E-14 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_1695 4a122ca0c3ebf13867bcce0d0b30d3a4 517 Pfam PF00005 ABC transporter 36 182 1.6E-30 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Trad_1695 4a122ca0c3ebf13867bcce0d0b30d3a4 517 Pfam PF00005 ABC transporter 287 443 5.0E-13 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Trad_1695 4a122ca0c3ebf13867bcce0d0b30d3a4 517 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Trad_1695 4a122ca0c3ebf13867bcce0d0b30d3a4 517 ProSitePatterns PS00211 ABC transporters family signature. 416 430 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Trad_1695 4a122ca0c3ebf13867bcce0d0b30d3a4 517 Gene3D G3DSA:3.40.50.300 12 254 2.4E-58 T 15-10-2018 Trad_1695 4a122ca0c3ebf13867bcce0d0b30d3a4 517 Gene3D G3DSA:3.40.50.300 270 505 1.8E-35 T 15-10-2018 Trad_1695 4a122ca0c3ebf13867bcce0d0b30d3a4 517 SUPERFAMILY SSF52540 270 501 7.73E-39 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_1695 4a122ca0c3ebf13867bcce0d0b30d3a4 517 SUPERFAMILY SSF52540 19 240 7.06E-59 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_0727 49bddf5f5d5ee4d904797e13f0880b57 220 Gene3D G3DSA:3.30.530.20 63 212 3.3E-47 T 15-10-2018 IPR023393 START-like domain superfamily Trad_0727 49bddf5f5d5ee4d904797e13f0880b57 220 SUPERFAMILY SSF55961 65 206 3.6E-25 T 15-10-2018 Trad_0727 49bddf5f5d5ee4d904797e13f0880b57 220 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 73 198 1.3E-16 T 15-10-2018 IPR005031 Coenzyme Q-binding protein COQ10, START domain Reactome: R-HSA-611105 Trad_0988 4bf8d5902cec0af8ce6bb0cfeab9f32c 563 Gene3D G3DSA:3.50.30.80 385 534 8.3E-55 T 15-10-2018 Trad_0988 4bf8d5902cec0af8ce6bb0cfeab9f32c 563 Pfam PF00920 Dehydratase family 41 560 5.5E-216 T 15-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Trad_0988 4bf8d5902cec0af8ce6bb0cfeab9f32c 563 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 471 482 - T 15-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Trad_0988 4bf8d5902cec0af8ce6bb0cfeab9f32c 563 SUPERFAMILY SSF143975 5 384 1.2E-138 T 15-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Trad_0988 4bf8d5902cec0af8ce6bb0cfeab9f32c 563 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 24 563 5.8E-240 T 15-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Trad_0988 4bf8d5902cec0af8ce6bb0cfeab9f32c 563 SUPERFAMILY SSF52016 386 563 3.22E-61 T 15-10-2018 Trad_0988 4bf8d5902cec0af8ce6bb0cfeab9f32c 563 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 129 139 - T 15-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Trad_0988 4bf8d5902cec0af8ce6bb0cfeab9f32c 563 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 11 563 46.803 T 15-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Trad_1044 44e2dd2d4475746b89397a56b8d220e3 264 SUPERFAMILY SSF54821 108 206 1.44E-38 T 15-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Trad_1044 44e2dd2d4475746b89397a56b8d220e3 264 Pfam PF07650 KH domain 39 109 1.4E-16 T 15-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Trad_1044 44e2dd2d4475746b89397a56b8d220e3 264 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 36.706 T 15-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 Trad_1044 44e2dd2d4475746b89397a56b8d220e3 264 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 15-10-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Trad_1044 44e2dd2d4475746b89397a56b8d220e3 264 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 1.7E-39 T 15-10-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Trad_1044 44e2dd2d4475746b89397a56b8d220e3 264 SMART SM00322 60 125 2.8E-6 T 15-10-2018 IPR004087 K Homology domain GO:0003676 Trad_1044 44e2dd2d4475746b89397a56b8d220e3 264 SUPERFAMILY SSF54814 2 106 1.31E-30 T 15-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 Trad_1044 44e2dd2d4475746b89397a56b8d220e3 264 Gene3D G3DSA:3.30.1140.32 108 208 7.6E-43 T 15-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Trad_1044 44e2dd2d4475746b89397a56b8d220e3 264 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 2.3E-86 T 15-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 Trad_1044 44e2dd2d4475746b89397a56b8d220e3 264 Gene3D G3DSA:3.30.300.20 19 107 9.0E-26 T 15-10-2018 IPR015946 K homology domain-like, alpha/beta Trad_2808 4f45825b2bcf6504ee6215987e3d60fa 207 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 1.1E-7 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Trad_2808 4f45825b2bcf6504ee6215987e3d60fa 207 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 96 109 1.1E-7 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Trad_2808 4f45825b2bcf6504ee6215987e3d60fa 207 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 126 142 1.1E-7 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Trad_2808 4f45825b2bcf6504ee6215987e3d60fa 207 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 144 164 1.1E-7 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Trad_2808 4f45825b2bcf6504ee6215987e3d60fa 207 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 171 184 1.1E-7 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Trad_2808 4f45825b2bcf6504ee6215987e3d60fa 207 Pfam PF13419 Haloacid dehalogenase-like hydrolase 125 181 1.6E-5 T 15-10-2018 Trad_2808 4f45825b2bcf6504ee6215987e3d60fa 207 Gene3D G3DSA:3.40.50.1000 4 185 1.3E-29 T 15-10-2018 IPR023214 HAD superfamily Trad_2808 4f45825b2bcf6504ee6215987e3d60fa 207 Gene3D G3DSA:1.10.150.240 16 86 1.3E-29 T 15-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 Trad_2808 4f45825b2bcf6504ee6215987e3d60fa 207 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 127 181 3.3E-13 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Trad_2808 4f45825b2bcf6504ee6215987e3d60fa 207 SUPERFAMILY SSF56784 5 186 5.67E-27 T 15-10-2018 IPR036412 HAD-like superfamily Trad_0216 2d751900e03ba3ad530ffd1fad1da47a 176 SMART SM00421 117 174 1.7E-26 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Trad_0216 2d751900e03ba3ad530ffd1fad1da47a 176 ProSitePatterns PS00622 LuxR-type HTH domain signature. 134 161 - T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Trad_0216 2d751900e03ba3ad530ffd1fad1da47a 176 Gene3D G3DSA:3.40.50.2300 54 112 4.9E-6 T 15-10-2018 Trad_0216 2d751900e03ba3ad530ffd1fad1da47a 176 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 162 6.2E-15 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Trad_0216 2d751900e03ba3ad530ffd1fad1da47a 176 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 120 134 6.2E-15 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Trad_0216 2d751900e03ba3ad530ffd1fad1da47a 176 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 134 150 6.2E-15 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Trad_0216 2d751900e03ba3ad530ffd1fad1da47a 176 SUPERFAMILY SSF46894 113 173 8.5E-21 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Trad_0216 2d751900e03ba3ad530ffd1fad1da47a 176 Gene3D G3DSA:1.10.10.10 113 175 9.1E-25 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Trad_0216 2d751900e03ba3ad530ffd1fad1da47a 176 Pfam PF00196 Bacterial regulatory proteins, luxR family 119 172 3.8E-20 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Trad_1171 97c54b8b0e76c67dbf7e01887aa8ef43 249 SUPERFAMILY SSF89392 29 201 5.49E-5 T 15-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX Trad_1171 97c54b8b0e76c67dbf7e01887aa8ef43 249 Gene3D G3DSA:2.50.20.10 20 247 8.8E-43 T 15-10-2018 Trad_1171 97c54b8b0e76c67dbf7e01887aa8ef43 249 Pfam PF17131 Outer membrane lipoprotein-sorting protein 69 247 1.4E-40 T 15-10-2018 IPR033399 Putative outer membrane lipoprotein-sorting protein Trad_2230 dfbf67c4a5e31330c0c57d1925d78698 462 SUPERFAMILY SSF63380 206 301 2.33E-15 T 15-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Trad_2230 dfbf67c4a5e31330c0c57d1925d78698 462 PRINTS PR00410 Phenol hydroxylase reductase family signature 296 305 2.7E-8 T 15-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Trad_2230 dfbf67c4a5e31330c0c57d1925d78698 462 PRINTS PR00410 Phenol hydroxylase reductase family signature 312 331 2.7E-8 T 15-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Trad_2230 dfbf67c4a5e31330c0c57d1925d78698 462 PRINTS PR00410 Phenol hydroxylase reductase family signature 337 346 2.7E-8 T 15-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Trad_2230 dfbf67c4a5e31330c0c57d1925d78698 462 PRINTS PR00410 Phenol hydroxylase reductase family signature 235 247 2.7E-8 T 15-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Trad_2230 dfbf67c4a5e31330c0c57d1925d78698 462 Pfam PF00175 Oxidoreductase NAD-binding domain 314 386 3.2E-12 T 15-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 Trad_2230 dfbf67c4a5e31330c0c57d1925d78698 462 Pfam PF01794 Ferric reductase like transmembrane component 44 159 2.3E-11 T 15-10-2018 IPR013130 Ferric reductase transmembrane component-like domain Trad_2230 dfbf67c4a5e31330c0c57d1925d78698 462 SUPERFAMILY SSF52343 294 457 2.88E-33 T 15-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Trad_2230 dfbf67c4a5e31330c0c57d1925d78698 462 Gene3D G3DSA:2.40.30.10 198 299 9.3E-15 T 15-10-2018 Trad_2230 dfbf67c4a5e31330c0c57d1925d78698 462 Pfam PF00970 Oxidoreductase FAD-binding domain 231 301 2.1E-5 T 15-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 Trad_2230 dfbf67c4a5e31330c0c57d1925d78698 462 Gene3D G3DSA:3.40.50.80 302 460 1.4E-32 T 15-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Trad_1991 b963e5332893d1daaad9a1ea0efd7d07 246 Gene3D G3DSA:3.40.50.300 11 242 3.1E-70 T 15-10-2018 Trad_1991 b963e5332893d1daaad9a1ea0efd7d07 246 SUPERFAMILY SSF52540 13 237 2.18E-64 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_1991 b963e5332893d1daaad9a1ea0efd7d07 246 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Trad_1991 b963e5332893d1daaad9a1ea0efd7d07 246 SMART SM00382 42 236 1.2E-15 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_1991 b963e5332893d1daaad9a1ea0efd7d07 246 Pfam PF00005 ABC transporter 33 181 7.2E-30 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Trad_1316 1426f7653c30cb941ddcbd8d9d643d68 307 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 122 303 4.5E-28 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Trad_1316 1426f7653c30cb941ddcbd8d9d643d68 307 SUPERFAMILY SSF161098 99 285 4.58E-24 T 15-10-2018 IPR035906 MetI-like superfamily Trad_1316 1426f7653c30cb941ddcbd8d9d643d68 307 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 29 70 2.7E-8 T 15-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain Trad_1316 1426f7653c30cb941ddcbd8d9d643d68 307 Gene3D G3DSA:1.10.3720.10 94 305 5.1E-20 T 15-10-2018 IPR035906 MetI-like superfamily Trad_1800 1f903283c5a873f58b2812fc3e959a00 269 SUPERFAMILY SSF51735 6 263 1.76E-68 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_1800 1f903283c5a873f58b2812fc3e959a00 269 Gene3D G3DSA:3.40.50.720 1 264 8.8E-71 T 15-10-2018 Trad_1800 1f903283c5a873f58b2812fc3e959a00 269 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 15-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Trad_1800 1f903283c5a873f58b2812fc3e959a00 269 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 262 1.9E-51 T 15-10-2018 Trad_1800 1f903283c5a873f58b2812fc3e959a00 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 2.2E-29 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_1800 1f903283c5a873f58b2812fc3e959a00 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 227 247 2.2E-29 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_1800 1f903283c5a873f58b2812fc3e959a00 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 2.2E-29 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_1800 1f903283c5a873f58b2812fc3e959a00 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 2.2E-29 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_1800 1f903283c5a873f58b2812fc3e959a00 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 2.2E-29 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_1226 73c6cf61453da32f2531743982c22704 247 Pfam PF12706 Beta-lactamase superfamily domain 34 219 1.6E-21 T 15-10-2018 IPR001279 Metallo-beta-lactamase Trad_1226 73c6cf61453da32f2531743982c22704 247 Gene3D G3DSA:3.60.15.10 1 246 4.1E-52 T 15-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Trad_1226 73c6cf61453da32f2531743982c22704 247 SMART SM00849 19 219 7.2E-9 T 15-10-2018 IPR001279 Metallo-beta-lactamase Trad_1226 73c6cf61453da32f2531743982c22704 247 SUPERFAMILY SSF56281 4 246 4.43E-52 T 15-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Trad_1757 8e6e95b62e3ed0c029035f285c2c84aa 186 Pfam PF00583 Acetyltransferase (GNAT) family 49 129 1.3E-13 T 15-10-2018 IPR000182 GNAT domain Trad_1757 8e6e95b62e3ed0c029035f285c2c84aa 186 SUPERFAMILY SSF55729 14 138 4.8E-25 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase Trad_1757 8e6e95b62e3ed0c029035f285c2c84aa 186 Gene3D G3DSA:3.40.630.30 15 147 1.7E-31 T 15-10-2018 Trad_0532 68e919d785753e8cdf913b05f6d932a0 74 SUPERFAMILY SSF55008 4 68 1.96E-20 T 15-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 Trad_0532 68e919d785753e8cdf913b05f6d932a0 74 Gene3D G3DSA:3.30.70.100 6 68 4.3E-24 T 15-10-2018 Trad_0532 68e919d785753e8cdf913b05f6d932a0 74 ProSitePatterns PS01047 Heavy-metal-associated domain. 10 39 - T 15-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 Trad_0532 68e919d785753e8cdf913b05f6d932a0 74 Pfam PF00403 Heavy-metal-associated domain 8 64 2.9E-17 T 15-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 Trad_0432 55b5101bc86dc5ea5b730e80ec859405 247 TIGRFAM TIGR01877 cas_cas6: CRISPR-associated endoribonuclease Cas6 35 239 2.6E-20 T 15-10-2018 IPR010156 CRISPR-associated protein, Cas6 GO:0016788 Trad_0432 55b5101bc86dc5ea5b730e80ec859405 247 Gene3D G3DSA:3.30.70.1900 110 240 3.3E-37 T 15-10-2018 Trad_0432 55b5101bc86dc5ea5b730e80ec859405 247 Gene3D G3DSA:3.30.70.1890 1 109 8.9E-53 T 15-10-2018 Trad_0432 55b5101bc86dc5ea5b730e80ec859405 247 Pfam PF10040 CRISPR-associated endoribonuclease Cas6 124 238 5.9E-20 T 15-10-2018 IPR019267 CRISPR-associated protein Cas6, C-terminal Trad_2458 fe14ab7163c096e92c307b95fc4c2286 294 Pfam PF02592 Putative vitamin uptake transporter 175 276 7.2E-13 T 15-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 Trad_1774 c0ac8d07010a39479aaf3f2208582c49 436 SUPERFAMILY SSF50249 14 107 1.05E-23 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold Trad_1774 c0ac8d07010a39479aaf3f2208582c49 436 Gene3D G3DSA:3.30.930.10 107 436 5.6E-104 T 15-10-2018 Trad_1774 c0ac8d07010a39479aaf3f2208582c49 436 Gene3D G3DSA:2.40.50.140 9 106 7.9E-25 T 15-10-2018 Trad_1774 c0ac8d07010a39479aaf3f2208582c49 436 SUPERFAMILY SSF55681 115 430 1.27E-84 T 15-10-2018 Trad_1774 c0ac8d07010a39479aaf3f2208582c49 436 Pfam PF00152 tRNA synthetases class II (D, K and N) 116 430 5.4E-75 T 15-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Trad_1774 c0ac8d07010a39479aaf3f2208582c49 436 PRINTS PR01042 Aspartyl-tRNA synthetase signature 202 215 4.3E-15 T 15-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Trad_1774 c0ac8d07010a39479aaf3f2208582c49 436 PRINTS PR01042 Aspartyl-tRNA synthetase signature 186 198 4.3E-15 T 15-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Trad_1774 c0ac8d07010a39479aaf3f2208582c49 436 PRINTS PR01042 Aspartyl-tRNA synthetase signature 391 405 4.3E-15 T 15-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Trad_1774 c0ac8d07010a39479aaf3f2208582c49 436 PRINTS PR01042 Aspartyl-tRNA synthetase signature 351 367 4.3E-15 T 15-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Trad_1774 c0ac8d07010a39479aaf3f2208582c49 436 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 10 435 1.1E-139 T 15-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 Trad_1774 c0ac8d07010a39479aaf3f2208582c49 436 Pfam PF01336 OB-fold nucleic acid binding domain 21 95 3.6E-13 T 15-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 Trad_1774 c0ac8d07010a39479aaf3f2208582c49 436 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 6 436 40.411 T 15-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 Trad_0908 daa756704c0e98fb17a84912a67ae6b6 378 Hamap MF_00993 Aminodeoxyfutalosine synthase [mqnE]. 20 377 48.033 T 15-10-2018 IPR022432 Aminodeoxyfutalosine synthase GO:0009234 KEGG: 00130+2.5.1.120|MetaCyc: PWY-7371|MetaCyc: PWY-7374 Trad_0908 daa756704c0e98fb17a84912a67ae6b6 378 TIGRFAM TIGR00423 TIGR00423: radical SAM domain protein, CofH subfamily 66 374 1.0E-91 T 15-10-2018 IPR020050 FO synthase, subunit 2 GO:0016765 KEGG: 00680+2.5.1.77 Trad_0908 daa756704c0e98fb17a84912a67ae6b6 378 Pfam PF04055 Radical SAM superfamily 76 243 4.9E-11 T 15-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Trad_0908 daa756704c0e98fb17a84912a67ae6b6 378 Gene3D G3DSA:3.20.20.70 21 372 2.1E-44 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Trad_0908 daa756704c0e98fb17a84912a67ae6b6 378 TIGRFAM TIGR03700 mena_SCO4494: putative menaquinone biosynthesis radical SAM enzyme, SCO4494 family 22 374 1.4E-146 T 15-10-2018 IPR022432 Aminodeoxyfutalosine synthase GO:0009234 KEGG: 00130+2.5.1.120|MetaCyc: PWY-7371|MetaCyc: PWY-7374 Trad_0908 daa756704c0e98fb17a84912a67ae6b6 378 SUPERFAMILY SSF102114 30 365 9.55E-45 T 15-10-2018 Trad_0908 daa756704c0e98fb17a84912a67ae6b6 378 PIRSF PIRSF004762 13 378 4.9E-95 T 15-10-2018 Trad_0437 aa403119067ef36834503ceffe02faf8 217 SUPERFAMILY SSF52317 5 207 8.88E-48 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like Trad_0437 aa403119067ef36834503ceffe02faf8 217 Pfam PF00117 Glutamine amidotransferase class-I 6 205 2.7E-13 T 15-10-2018 IPR017926 Glutamine amidotransferase Trad_0437 aa403119067ef36834503ceffe02faf8 217 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 3 208 31.48 T 15-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 Trad_0437 aa403119067ef36834503ceffe02faf8 217 PIRSF PIRSF000495 2 211 3.2E-58 T 15-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 Trad_0437 aa403119067ef36834503ceffe02faf8 217 Gene3D G3DSA:3.40.50.880 2 215 1.0E-65 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like Trad_0437 aa403119067ef36834503ceffe02faf8 217 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 5 207 7.1E-56 T 15-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 Trad_0731 950cdd0a4bfb170e88a06d504acbcf28 209 Pfam PF01583 Adenylylsulphate kinase 33 188 4.9E-77 T 15-10-2018 Trad_0731 950cdd0a4bfb170e88a06d504acbcf28 209 SUPERFAMILY SSF52540 29 203 4.56E-43 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_0731 950cdd0a4bfb170e88a06d504acbcf28 209 Gene3D G3DSA:3.40.50.300 10 209 9.2E-88 T 15-10-2018 Trad_0731 950cdd0a4bfb170e88a06d504acbcf28 209 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 32 204 41.007 T 15-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 Trad_0731 950cdd0a4bfb170e88a06d504acbcf28 209 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 16 198 9.1E-87 T 15-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 Trad_2917 31c65f52861de8b5d3316ba46b6f05fa 299 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 12 169 6.1E-49 T 15-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 Trad_2917 31c65f52861de8b5d3316ba46b6f05fa 299 SUPERFAMILY SSF51735 11 170 7.05E-47 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_2917 31c65f52861de8b5d3316ba46b6f05fa 299 Gene3D G3DSA:3.40.50.720 7 169 8.3E-55 T 15-10-2018 Trad_2917 31c65f52861de8b5d3316ba46b6f05fa 299 SUPERFAMILY SSF48179 170 298 7.82E-36 T 15-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Trad_2917 31c65f52861de8b5d3316ba46b6f05fa 299 PIRSF PIRSF000103 5 299 9.4E-82 T 15-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 Trad_2917 31c65f52861de8b5d3316ba46b6f05fa 299 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 172 291 5.4E-31 T 15-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 Trad_2917 31c65f52861de8b5d3316ba46b6f05fa 299 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 15 28 - T 15-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 Trad_2917 31c65f52861de8b5d3316ba46b6f05fa 299 Gene3D G3DSA:1.10.1040.10 170 299 7.6E-37 T 15-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 Trad_0302 ab8e3cc116fcba1a3bd6466ccfa1df45 524 Gene3D G3DSA:3.40.50.720 95 277 8.2E-105 T 15-10-2018 Trad_0302 ab8e3cc116fcba1a3bd6466ccfa1df45 524 Pfam PF01842 ACT domain 450 513 6.7E-11 T 15-10-2018 IPR002912 ACT domain Trad_0302 ab8e3cc116fcba1a3bd6466ccfa1df45 524 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 104 279 2.8E-56 T 15-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 Trad_0302 ab8e3cc116fcba1a3bd6466ccfa1df45 524 SUPERFAMILY SSF51735 95 280 1.37E-54 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_0302 ab8e3cc116fcba1a3bd6466ccfa1df45 524 SUPERFAMILY SSF55021 441 516 6.25E-16 T 15-10-2018 Trad_0302 ab8e3cc116fcba1a3bd6466ccfa1df45 524 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 189 211 - T 15-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site Trad_0302 ab8e3cc116fcba1a3bd6466ccfa1df45 524 TIGRFAM TIGR01327 PGDH: phosphoglycerate dehydrogenase 4 522 2.9E-185 T 15-10-2018 IPR006236 D-3-phosphoglycerate dehydrogenase GO:0004617|GO:0006564 KEGG: 00260+1.1.1.95|KEGG: 00680+1.1.1.95|Reactome: R-HSA-977347 Trad_0302 ab8e3cc116fcba1a3bd6466ccfa1df45 524 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 140 167 - T 15-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 Trad_0302 ab8e3cc116fcba1a3bd6466ccfa1df45 524 Gene3D G3DSA:3.30.1330.90 315 449 7.7E-34 T 15-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 Trad_0302 ab8e3cc116fcba1a3bd6466ccfa1df45 524 Gene3D G3DSA:3.40.50.720 19 303 8.2E-105 T 15-10-2018 Trad_0302 ab8e3cc116fcba1a3bd6466ccfa1df45 524 SUPERFAMILY SSF143548 317 445 7.06E-31 T 15-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 Trad_0302 ab8e3cc116fcba1a3bd6466ccfa1df45 524 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 19 311 2.4E-32 T 15-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 Trad_0302 ab8e3cc116fcba1a3bd6466ccfa1df45 524 SUPERFAMILY SSF52283 3 129 1.89E-32 T 15-10-2018 Trad_0302 ab8e3cc116fcba1a3bd6466ccfa1df45 524 Gene3D G3DSA:3.30.70.260 450 524 1.7E-19 T 15-10-2018 Trad_1906 4718b454cb726f7988b795e68a885209 274 TIGRFAM TIGR01097 PhnE: phosphonate ABC transporter, permease protein PhnE 26 273 6.4E-85 T 15-10-2018 IPR005769 ABC transporter, permease PhnE/PtxC GO:0005887|GO:0015604|GO:0015716 Trad_1906 4718b454cb726f7988b795e68a885209 274 Gene3D G3DSA:1.10.3720.10 74 273 5.0E-29 T 15-10-2018 IPR035906 MetI-like superfamily Trad_1906 4718b454cb726f7988b795e68a885209 274 SUPERFAMILY SSF161098 77 266 9.16E-35 T 15-10-2018 IPR035906 MetI-like superfamily Trad_1906 4718b454cb726f7988b795e68a885209 274 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 102 260 5.8E-10 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Trad_0858 cb6fb1705b141a29e5fbe8d55d252830 247 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Trad_0858 cb6fb1705b141a29e5fbe8d55d252830 247 SMART SM00382 33 217 2.7E-10 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_0858 cb6fb1705b141a29e5fbe8d55d252830 247 SUPERFAMILY SSF52540 8 229 4.95E-51 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_0858 cb6fb1705b141a29e5fbe8d55d252830 247 Gene3D G3DSA:3.40.50.300 3 240 4.1E-56 T 15-10-2018 Trad_0858 cb6fb1705b141a29e5fbe8d55d252830 247 Pfam PF00005 ABC transporter 24 167 1.7E-24 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Trad_1237 d7ccefc7fa155f903bab9299be02c109 266 Pfam PF00455 DeoR C terminal sensor domain 84 239 1.3E-49 T 15-10-2018 IPR014036 DeoR C-terminal sensor domain Trad_1237 d7ccefc7fa155f903bab9299be02c109 266 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 30 44 5.8E-7 T 15-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Trad_1237 d7ccefc7fa155f903bab9299be02c109 266 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 44 62 5.8E-7 T 15-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Trad_1237 d7ccefc7fa155f903bab9299be02c109 266 Pfam PF08220 DeoR-like helix-turn-helix domain 12 66 2.1E-17 T 15-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Trad_1237 d7ccefc7fa155f903bab9299be02c109 266 SUPERFAMILY SSF46785 9 66 4.39E-14 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Trad_1237 d7ccefc7fa155f903bab9299be02c109 266 Gene3D G3DSA:1.10.10.10 3 72 3.7E-8 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Trad_1237 d7ccefc7fa155f903bab9299be02c109 266 SUPERFAMILY SSF100950 85 241 2.7E-32 T 15-10-2018 IPR037171 NagB/RpiA transferase-like Trad_1237 d7ccefc7fa155f903bab9299be02c109 266 SMART SM01134 79 241 1.1E-68 T 15-10-2018 Trad_1237 d7ccefc7fa155f903bab9299be02c109 266 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 25 36 3.5E-7 T 15-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Trad_1237 d7ccefc7fa155f903bab9299be02c109 266 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 36 55 3.5E-7 T 15-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Trad_1237 d7ccefc7fa155f903bab9299be02c109 266 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 9 25 3.5E-7 T 15-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Trad_1237 d7ccefc7fa155f903bab9299be02c109 266 SMART SM00420 12 64 2.0E-19 T 15-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Trad_1040 399a1b9f3dbc9c345d0883547d0f2f12 95 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 4 93 19.405 T 15-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 Trad_1040 399a1b9f3dbc9c345d0883547d0f2f12 95 SUPERFAMILY SSF54189 2 92 8.27E-28 T 15-10-2018 IPR012678 Ribosomal protein L23/L15e core domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Trad_1040 399a1b9f3dbc9c345d0883547d0f2f12 95 Gene3D G3DSA:3.30.70.330 1 95 1.6E-31 T 15-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily Trad_1040 399a1b9f3dbc9c345d0883547d0f2f12 95 Pfam PF00276 Ribosomal protein L23 5 89 4.8E-28 T 15-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 Trad_0883 81cdbf123b12073591ad4cf689f16113 241 SUPERFAMILY SSF56300 3 232 1.19E-45 T 15-10-2018 Trad_0883 81cdbf123b12073591ad4cf689f16113 241 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 2 194 2.4E-23 T 15-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 Trad_0883 81cdbf123b12073591ad4cf689f16113 241 PIRSF PIRSF000883 1 236 2.0E-51 T 15-10-2018 IPR011152 Phosphoesterase MJ0912 Trad_0883 81cdbf123b12073591ad4cf689f16113 241 Gene3D G3DSA:3.60.21.10 1 234 9.4E-50 T 15-10-2018 IPR029052 Metallo-dependent phosphatase-like Trad_0735 c580a7f0aad8b8e0f19db598e459f797 408 Gene3D G3DSA:3.40.50.2000 200 379 5.4E-54 T 15-10-2018 Trad_0735 c580a7f0aad8b8e0f19db598e459f797 408 SUPERFAMILY SSF53756 13 393 2.22E-68 T 15-10-2018 Trad_0735 c580a7f0aad8b8e0f19db598e459f797 408 Pfam PF00534 Glycosyl transferases group 1 219 373 1.7E-34 T 15-10-2018 IPR001296 Glycosyl transferase, family 1 Trad_0735 c580a7f0aad8b8e0f19db598e459f797 408 Gene3D G3DSA:3.40.50.2000 104 389 5.4E-54 T 15-10-2018 Trad_2960 e161081f48bf81adcb0673a41eb2e06a 494 Gene3D G3DSA:2.40.50.140 1 145 4.5E-37 T 15-10-2018 Trad_2960 e161081f48bf81adcb0673a41eb2e06a 494 SUPERFAMILY SSF55681 150 492 7.74E-111 T 15-10-2018 Trad_2960 e161081f48bf81adcb0673a41eb2e06a 494 SUPERFAMILY SSF50249 4 143 1.54E-35 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold Trad_2960 e161081f48bf81adcb0673a41eb2e06a 494 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 5 493 2.4E-170 T 15-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Trad_2960 e161081f48bf81adcb0673a41eb2e06a 494 Pfam PF01336 OB-fold nucleic acid binding domain 59 133 1.2E-16 T 15-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 Trad_2960 e161081f48bf81adcb0673a41eb2e06a 494 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 11 494 40.486 T 15-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Trad_2960 e161081f48bf81adcb0673a41eb2e06a 494 Gene3D G3DSA:3.30.930.10 146 494 2.8E-125 T 15-10-2018 Trad_2960 e161081f48bf81adcb0673a41eb2e06a 494 PRINTS PR00982 Lysyl-tRNA synthetase signature 187 197 5.0E-37 T 15-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Trad_2960 e161081f48bf81adcb0673a41eb2e06a 494 PRINTS PR00982 Lysyl-tRNA synthetase signature 203 219 5.0E-37 T 15-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Trad_2960 e161081f48bf81adcb0673a41eb2e06a 494 PRINTS PR00982 Lysyl-tRNA synthetase signature 232 245 5.0E-37 T 15-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Trad_2960 e161081f48bf81adcb0673a41eb2e06a 494 PRINTS PR00982 Lysyl-tRNA synthetase signature 376 392 5.0E-37 T 15-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Trad_2960 e161081f48bf81adcb0673a41eb2e06a 494 PRINTS PR00982 Lysyl-tRNA synthetase signature 250 267 5.0E-37 T 15-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Trad_2960 e161081f48bf81adcb0673a41eb2e06a 494 Pfam PF00152 tRNA synthetases class II (D, K and N) 150 491 8.0E-79 T 15-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Trad_1443 71a8be28536a9466cb3c8a0f18e25f7c 414 Pfam PF13416 Bacterial extracellular solute-binding protein 35 332 4.0E-24 T 15-10-2018 IPR006059 Bacterial extracellular solute-binding protein Trad_1443 71a8be28536a9466cb3c8a0f18e25f7c 414 SUPERFAMILY SSF53850 15 407 1.27E-51 T 15-10-2018 Trad_1443 71a8be28536a9466cb3c8a0f18e25f7c 414 Gene3D G3DSA:3.40.190.10 11 408 9.4E-61 T 15-10-2018 Trad_2551 8ff59927c8932bcac12ef66ecf02bef8 433 Gene3D G3DSA:3.90.1380.10 1 81 1.2E-15 T 15-10-2018 IPR037158 Threonine synthase, N-terminal domain superfamily Trad_2551 8ff59927c8932bcac12ef66ecf02bef8 433 SUPERFAMILY SSF53686 1 430 1.7E-121 T 15-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Trad_2551 8ff59927c8932bcac12ef66ecf02bef8 433 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 95 109 - T 15-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 Trad_2551 8ff59927c8932bcac12ef66ecf02bef8 433 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 85 381 2.9E-20 T 15-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Trad_2551 8ff59927c8932bcac12ef66ecf02bef8 433 TIGRFAM TIGR00260 thrC: threonine synthase 71 395 3.5E-75 T 15-10-2018 IPR004450 Threonine synthase-like Trad_2551 8ff59927c8932bcac12ef66ecf02bef8 433 Gene3D G3DSA:3.40.50.1100 101 402 2.9E-117 T 15-10-2018 Trad_2551 8ff59927c8932bcac12ef66ecf02bef8 433 Pfam PF14821 Threonine synthase N terminus 3 77 6.3E-14 T 15-10-2018 IPR029144 Threonine synthase, N-terminal Trad_2551 8ff59927c8932bcac12ef66ecf02bef8 433 Gene3D G3DSA:3.40.50.1100 83 399 2.9E-117 T 15-10-2018 Trad_0268 1fe56f19954253e5fbb6143b095de55d 439 Hamap MF_01283 Riboflavin biosynthesis protein RibBA [ribBA]. 17 410 51.255 T 15-10-2018 IPR016299 Riboflavin biosynthesis protein RibBA GO:0009231 KEGG: 00740+3.5.4.25+4.1.99.12|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 Trad_0268 1fe56f19954253e5fbb6143b095de55d 439 SUPERFAMILY SSF55821 16 217 1.74E-80 T 15-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily Trad_0268 1fe56f19954253e5fbb6143b095de55d 439 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 23 213 7.3E-82 T 15-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Trad_0268 1fe56f19954253e5fbb6143b095de55d 439 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 16 218 36.977 T 15-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Trad_0268 1fe56f19954253e5fbb6143b095de55d 439 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 219 414 43.898 T 15-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 Trad_0268 1fe56f19954253e5fbb6143b095de55d 439 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 20 214 3.5E-72 T 15-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Trad_0268 1fe56f19954253e5fbb6143b095de55d 439 SUPERFAMILY SSF142695 219 391 3.14E-72 T 15-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 Trad_0268 1fe56f19954253e5fbb6143b095de55d 439 Pfam PF00925 GTP cyclohydrolase II 223 388 3.5E-73 T 15-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 Trad_0268 1fe56f19954253e5fbb6143b095de55d 439 Gene3D G3DSA:3.40.50.10990 220 392 3.2E-76 T 15-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 Trad_0268 1fe56f19954253e5fbb6143b095de55d 439 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 223 411 1.4E-79 T 15-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 Trad_0268 1fe56f19954253e5fbb6143b095de55d 439 Gene3D G3DSA:3.90.870.10 8 219 1.0E-86 T 15-10-2018 Trad_0268 1fe56f19954253e5fbb6143b095de55d 439 PIRSF PIRSF001259 16 421 2.2E-176 T 15-10-2018 Trad_2479 08faa8091e30ebe63e53cb28977c579e 227 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 140 - T 15-10-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Trad_2479 08faa8091e30ebe63e53cb28977c579e 227 Gene3D G3DSA:3.30.190.20 25 223 9.9E-82 T 15-10-2018 Trad_2479 08faa8091e30ebe63e53cb28977c579e 227 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 227 40.448 T 15-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 Trad_2479 08faa8091e30ebe63e53cb28977c579e 227 Gene3D G3DSA:3.40.50.790 68 160 9.9E-82 T 15-10-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich Trad_2479 08faa8091e30ebe63e53cb28977c579e 227 SUPERFAMILY SSF56808 6 225 1.44E-78 T 15-10-2018 IPR023674 Ribosomal protein L1-like Trad_2479 08faa8091e30ebe63e53cb28977c579e 227 Pfam PF00687 Ribosomal protein L1p/L10e family 31 221 4.7E-50 T 15-10-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein Trad_2479 08faa8091e30ebe63e53cb28977c579e 227 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 226 1.3E-97 T 15-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 Trad_2479 08faa8091e30ebe63e53cb28977c579e 227 PIRSF PIRSF002155 1 227 2.6E-76 T 15-10-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Trad_1124 c3673a5d8134d423cf33b55ca8b5e2d3 824 Gene3D G3DSA:2.60.40.10 731 824 8.7E-9 T 15-10-2018 IPR013783 Immunoglobulin-like fold Trad_1124 c3673a5d8134d423cf33b55ca8b5e2d3 824 SMART SM00089 435 517 5.3E-19 T 15-10-2018 IPR022409 PKD/Chitinase domain Trad_1124 c3673a5d8134d423cf33b55ca8b5e2d3 824 Pfam PF07995 Glucose / Sorbosone dehydrogenase 50 333 2.6E-47 T 15-10-2018 IPR012938 Glucose/Sorbosone dehydrogenase Trad_1124 c3673a5d8134d423cf33b55ca8b5e2d3 824 Pfam PF00801 PKD domain 438 503 2.9E-11 T 15-10-2018 IPR000601 PKD domain Trad_1124 c3673a5d8134d423cf33b55ca8b5e2d3 824 Gene3D G3DSA:2.60.40.10 429 514 1.0E-22 T 15-10-2018 IPR013783 Immunoglobulin-like fold Trad_1124 c3673a5d8134d423cf33b55ca8b5e2d3 824 Gene3D G3DSA:2.120.10.30 40 426 2.0E-85 T 15-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like Trad_1124 c3673a5d8134d423cf33b55ca8b5e2d3 824 SUPERFAMILY SSF50952 28 302 1.05E-26 T 15-10-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 Trad_1124 c3673a5d8134d423cf33b55ca8b5e2d3 824 SUPERFAMILY SSF49299 431 517 6.8E-19 T 15-10-2018 IPR035986 PKD domain superfamily Trad_2153 46b3cab0299e7888192da920319c5d81 200 SUPERFAMILY SSF53178 9 188 1.7E-59 T 15-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 Trad_2153 46b3cab0299e7888192da920319c5d81 200 Gene3D G3DSA:3.40.50.1470 6 191 2.1E-64 T 15-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 Trad_2153 46b3cab0299e7888192da920319c5d81 200 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 9 180 32.967 T 15-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 Trad_2153 46b3cab0299e7888192da920319c5d81 200 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 22 35 - T 15-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 Trad_2153 46b3cab0299e7888192da920319c5d81 200 Pfam PF01195 Peptidyl-tRNA hydrolase 11 187 7.1E-53 T 15-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 Trad_2153 46b3cab0299e7888192da920319c5d81 200 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 10 187 1.3E-52 T 15-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 Trad_1728 a6d20c46aabef9e3a09578a48b43b2ad 675 Gene3D G3DSA:2.60.40.1180 599 658 5.2E-10 T 15-10-2018 IPR013780 Glycosyl hydrolase, all-beta Trad_1728 a6d20c46aabef9e3a09578a48b43b2ad 675 Gene3D G3DSA:3.40.50.880 386 598 7.0E-67 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like Trad_1728 a6d20c46aabef9e3a09578a48b43b2ad 675 PIRSF PIRSF001084 1 659 2.4E-263 T 15-10-2018 IPR003476 Glycoside hydrolase, family 42 GO:0004565|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 Trad_1728 a6d20c46aabef9e3a09578a48b43b2ad 675 SUPERFAMILY SSF51445 2 359 1.1E-118 T 15-10-2018 IPR017853 Glycoside hydrolase superfamily Trad_1728 a6d20c46aabef9e3a09578a48b43b2ad 675 Pfam PF02449 Beta-galactosidase 8 377 9.0E-153 T 15-10-2018 IPR013529 Glycoside hydrolase, family 42, N-terminal GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 Trad_1728 a6d20c46aabef9e3a09578a48b43b2ad 675 SUPERFAMILY SSF52317 385 592 8.85E-57 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like Trad_1728 a6d20c46aabef9e3a09578a48b43b2ad 675 Gene3D G3DSA:3.20.20.80 1 382 3.0E-144 T 15-10-2018 Trad_1728 a6d20c46aabef9e3a09578a48b43b2ad 675 Pfam PF08533 Beta-galactosidase C-terminal domain 601 652 7.8E-6 T 15-10-2018 IPR013739 Beta-galactosidase C-terminal GO:0004565|GO:0006012 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 Trad_1728 a6d20c46aabef9e3a09578a48b43b2ad 675 Pfam PF08532 Beta-galactosidase trimerisation domain 389 592 6.7E-61 T 15-10-2018 IPR013738 Beta-galactosidase trimerisation GO:0004565|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 Trad_1432 0e2bbf73ee89875d97ac3a251dea5e1b 102 Pfam PF01381 Helix-turn-helix 16 69 1.6E-9 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Trad_1432 0e2bbf73ee89875d97ac3a251dea5e1b 102 Gene3D G3DSA:1.10.260.40 1 100 1.8E-33 T 15-10-2018 Trad_1432 0e2bbf73ee89875d97ac3a251dea5e1b 102 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 6 80 3.1E-33 T 15-10-2018 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 Trad_1432 0e2bbf73ee89875d97ac3a251dea5e1b 102 SUPERFAMILY SSF47413 10 88 4.29E-26 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Trad_1432 0e2bbf73ee89875d97ac3a251dea5e1b 102 SMART SM00530 15 70 6.3E-7 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Trad_2619 9f24f0e1db9de940aa1915c825532206 257 Gene3D G3DSA:1.10.3720.10 2 249 1.8E-48 T 15-10-2018 IPR035906 MetI-like superfamily Trad_2619 9f24f0e1db9de940aa1915c825532206 257 SUPERFAMILY SSF161098 5 249 9.35E-46 T 15-10-2018 IPR035906 MetI-like superfamily Trad_2619 9f24f0e1db9de940aa1915c825532206 257 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 76 247 6.1E-15 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Trad_0597 9e870be6c1aff005ed6c82c389349167 289 Gene3D G3DSA:2.60.120.560 60 287 4.2E-24 T 15-10-2018 Trad_0597 9e870be6c1aff005ed6c82c389349167 289 SUPERFAMILY SSF49899 60 264 1.25E-5 T 15-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily Trad_0597 9e870be6c1aff005ed6c82c389349167 289 Pfam PF06439 Domain of Unknown Function (DUF1080) 68 284 1.8E-21 T 15-10-2018 IPR010496 Domain of unknown function DUF1080 Trad_0252 4db6d8c13b3e7210ced3fae08074345d 649 SUPERFAMILY SSF56801 16 643 1.83E-186 T 15-10-2018 Trad_0252 4db6d8c13b3e7210ced3fae08074345d 649 Gene3D G3DSA:3.30.300.30 520 646 1.6E-32 T 15-10-2018 Trad_0252 4db6d8c13b3e7210ced3fae08074345d 649 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 28 643 0.0 T 15-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 Trad_0252 4db6d8c13b3e7210ced3fae08074345d 649 Pfam PF13193 AMP-binding enzyme C-terminal domain 533 611 9.8E-31 T 15-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Trad_0252 4db6d8c13b3e7210ced3fae08074345d 649 Gene3D G3DSA:3.40.50.12780 60 517 2.5E-111 T 15-10-2018 Trad_0252 4db6d8c13b3e7210ced3fae08074345d 649 ProSitePatterns PS00455 Putative AMP-binding domain signature. 263 274 - T 15-10-2018 IPR020845 AMP-binding, conserved site Trad_0252 4db6d8c13b3e7210ced3fae08074345d 649 Pfam PF00501 AMP-binding enzyme 92 524 1.6E-97 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Trad_0252 4db6d8c13b3e7210ced3fae08074345d 649 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 9 646 52.956 T 15-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 Trad_0252 4db6d8c13b3e7210ced3fae08074345d 649 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 32 85 3.7E-25 T 15-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 Trad_1055 798edd08b29d251620955a7e6873d789 157 Gene3D G3DSA:3.30.230.10 71 157 2.1E-28 T 15-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Trad_1055 798edd08b29d251620955a7e6873d789 157 Pfam PF03719 Ribosomal protein S5, C-terminal domain 83 153 2.4E-25 T 15-10-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 Trad_1055 798edd08b29d251620955a7e6873d789 157 Gene3D G3DSA:3.30.160.20 1 68 2.0E-26 T 15-10-2018 Trad_1055 798edd08b29d251620955a7e6873d789 157 SUPERFAMILY SSF54768 4 71 9.52E-21 T 15-10-2018 Trad_1055 798edd08b29d251620955a7e6873d789 157 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 4 155 5.1E-55 T 15-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 Trad_1055 798edd08b29d251620955a7e6873d789 157 Pfam PF00333 Ribosomal protein S5, N-terminal domain 6 70 8.2E-24 T 15-10-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 Trad_1055 798edd08b29d251620955a7e6873d789 157 ProSitePatterns PS00585 Ribosomal protein S5 signature. 23 55 - T 15-10-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site Trad_1055 798edd08b29d251620955a7e6873d789 157 SUPERFAMILY SSF54211 75 153 3.03E-22 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Trad_1055 798edd08b29d251620955a7e6873d789 157 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 157 29.994 T 15-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 Trad_0915 9c799c3eac3a15f5f14e06edb9de774f 306 SUPERFAMILY SSF52768 4 301 4.86E-74 T 15-10-2018 IPR023696 Ureohydrolase domain superfamily Trad_0915 9c799c3eac3a15f5f14e06edb9de774f 306 Pfam PF00491 Arginase family 26 297 4.3E-62 T 15-10-2018 IPR006035 Ureohydrolase GO:0046872 Trad_0915 9c799c3eac3a15f5f14e06edb9de774f 306 Gene3D G3DSA:3.40.800.10 2 305 7.0E-102 T 15-10-2018 Trad_0915 9c799c3eac3a15f5f14e06edb9de774f 306 PIRSF PIRSF036979 12 304 1.3E-58 T 15-10-2018 IPR006035 Ureohydrolase GO:0046872 Trad_0743 32fdb9c6c6d6966aa7325129eeae552f 427 Pfam PF02308 MgtC family 10 132 8.6E-22 T 15-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 Trad_0743 32fdb9c6c6d6966aa7325129eeae552f 427 Pfam PF13194 Domain of unknown function (DUF4010) 180 395 2.0E-59 T 15-10-2018 IPR025105 Domain of unknown function DUF4010 Trad_0743 32fdb9c6c6d6966aa7325129eeae552f 427 PRINTS PR01837 MgtC/SapB protein signature 86 110 3.3E-7 T 15-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 Trad_0743 32fdb9c6c6d6966aa7325129eeae552f 427 PRINTS PR01837 MgtC/SapB protein signature 13 32 3.3E-7 T 15-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 Trad_0051 1076f633c76aaf46a4c81f340c459b2b 370 Pfam PF08402 TOBE domain 284 367 9.7E-15 T 15-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 Trad_0051 1076f633c76aaf46a4c81f340c459b2b 370 Gene3D G3DSA:2.40.50.140 291 338 3.9E-13 T 15-10-2018 Trad_0051 1076f633c76aaf46a4c81f340c459b2b 370 Gene3D G3DSA:2.40.50.940 229 290 3.9E-13 T 15-10-2018 Trad_0051 1076f633c76aaf46a4c81f340c459b2b 370 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 41 367 4.2E-111 T 15-10-2018 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 Trad_0051 1076f633c76aaf46a4c81f340c459b2b 370 Pfam PF00005 ABC transporter 27 168 2.4E-33 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Trad_0051 1076f633c76aaf46a4c81f340c459b2b 370 SMART SM00382 35 218 2.4E-19 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_0051 1076f633c76aaf46a4c81f340c459b2b 370 Gene3D G3DSA:3.40.50.300 4 228 2.0E-68 T 15-10-2018 Trad_0051 1076f633c76aaf46a4c81f340c459b2b 370 SUPERFAMILY SSF50331 243 367 4.82E-16 T 15-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal Trad_0051 1076f633c76aaf46a4c81f340c459b2b 370 SUPERFAMILY SSF52540 5 248 6.82E-87 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_0051 1076f633c76aaf46a4c81f340c459b2b 370 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Trad_0991 3895a629d60770513d90886b5d8fcf7e 255 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 6.9E-10 T 15-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Trad_0991 3895a629d60770513d90886b5d8fcf7e 255 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 6.9E-10 T 15-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Trad_0991 3895a629d60770513d90886b5d8fcf7e 255 SMART SM00420 6 58 3.1E-18 T 15-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Trad_0991 3895a629d60770513d90886b5d8fcf7e 255 SUPERFAMILY SSF46785 5 60 3.74E-15 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Trad_0991 3895a629d60770513d90886b5d8fcf7e 255 Pfam PF08220 DeoR-like helix-turn-helix domain 6 58 2.1E-17 T 15-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Trad_0991 3895a629d60770513d90886b5d8fcf7e 255 Pfam PF00455 DeoR C terminal sensor domain 74 233 4.8E-47 T 15-10-2018 IPR014036 DeoR C-terminal sensor domain Trad_0991 3895a629d60770513d90886b5d8fcf7e 255 SUPERFAMILY SSF100950 75 237 2.62E-27 T 15-10-2018 IPR037171 NagB/RpiA transferase-like Trad_0991 3895a629d60770513d90886b5d8fcf7e 255 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 15-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 Trad_0991 3895a629d60770513d90886b5d8fcf7e 255 Gene3D G3DSA:1.10.10.10 5 51 5.8E-7 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Trad_0991 3895a629d60770513d90886b5d8fcf7e 255 SMART SM01134 72 235 8.3E-62 T 15-10-2018 Trad_2588 411516941ea8fce7b35a6fc3cd4898ec 270 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 88 268 7.1E-32 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Trad_2588 411516941ea8fce7b35a6fc3cd4898ec 270 SUPERFAMILY SSF161098 65 252 9.55E-27 T 15-10-2018 IPR035906 MetI-like superfamily Trad_2588 411516941ea8fce7b35a6fc3cd4898ec 270 Gene3D G3DSA:1.10.3720.10 61 263 5.6E-22 T 15-10-2018 IPR035906 MetI-like superfamily Trad_0086 91eb46aad58ce672d2e86c923abb7d03 380 PIRSF PIRSF001434 1 378 3.4E-131 T 15-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 Trad_0086 91eb46aad58ce672d2e86c923abb7d03 380 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 8 375 3.0E-117 T 15-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 Trad_0086 91eb46aad58ce672d2e86c923abb7d03 380 Gene3D G3DSA:3.40.640.10 5 251 6.5E-90 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Trad_0086 91eb46aad58ce672d2e86c923abb7d03 380 Gene3D G3DSA:3.90.1150.10 253 379 2.6E-44 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Trad_0086 91eb46aad58ce672d2e86c923abb7d03 380 SUPERFAMILY SSF53383 9 376 1.61E-107 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Trad_2803 48aad73005a34f648622b85bcd73dd43 655 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 30 535 4.9E-220 T 15-10-2018 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005886|GO:0015990|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 Trad_2803 48aad73005a34f648622b85bcd73dd43 655 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 259 313 - T 15-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Trad_2803 48aad73005a34f648622b85bcd73dd43 655 SUPERFAMILY SSF81442 26 537 1.96E-179 T 15-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Trad_2803 48aad73005a34f648622b85bcd73dd43 655 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 38 483 7.7E-148 T 15-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Trad_2803 48aad73005a34f648622b85bcd73dd43 655 Gene3D G3DSA:1.20.210.10 18 543 2.7E-211 T 15-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Trad_2803 48aad73005a34f648622b85bcd73dd43 655 PRINTS PR01165 Cytochrome c oxidase subunit I signature 177 195 1.6E-100 T 15-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Trad_2803 48aad73005a34f648622b85bcd73dd43 655 PRINTS PR01165 Cytochrome c oxidase subunit I signature 327 348 1.6E-100 T 15-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Trad_2803 48aad73005a34f648622b85bcd73dd43 655 PRINTS PR01165 Cytochrome c oxidase subunit I signature 390 409 1.6E-100 T 15-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Trad_2803 48aad73005a34f648622b85bcd73dd43 655 PRINTS PR01165 Cytochrome c oxidase subunit I signature 76 99 1.6E-100 T 15-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Trad_2803 48aad73005a34f648622b85bcd73dd43 655 PRINTS PR01165 Cytochrome c oxidase subunit I signature 103 127 1.6E-100 T 15-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Trad_2803 48aad73005a34f648622b85bcd73dd43 655 PRINTS PR01165 Cytochrome c oxidase subunit I signature 362 380 1.6E-100 T 15-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Trad_2803 48aad73005a34f648622b85bcd73dd43 655 PRINTS PR01165 Cytochrome c oxidase subunit I signature 206 225 1.6E-100 T 15-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Trad_2803 48aad73005a34f648622b85bcd73dd43 655 PRINTS PR01165 Cytochrome c oxidase subunit I signature 257 278 1.6E-100 T 15-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Trad_2803 48aad73005a34f648622b85bcd73dd43 655 PRINTS PR01165 Cytochrome c oxidase subunit I signature 440 461 1.6E-100 T 15-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Trad_2803 48aad73005a34f648622b85bcd73dd43 655 PRINTS PR01165 Cytochrome c oxidase subunit I signature 145 157 1.6E-100 T 15-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Trad_2803 48aad73005a34f648622b85bcd73dd43 655 PRINTS PR01165 Cytochrome c oxidase subunit I signature 29 54 1.6E-100 T 15-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Trad_2803 48aad73005a34f648622b85bcd73dd43 655 PRINTS PR01165 Cytochrome c oxidase subunit I signature 303 318 1.6E-100 T 15-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Trad_2242 7fbd8f75c4f70913afe411554fea759c 364 SUPERFAMILY SSF53448 39 245 7.5E-38 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Trad_2242 7fbd8f75c4f70913afe411554fea759c 364 Pfam PF13641 Glycosyltransferase like family 2 43 250 1.4E-24 T 15-10-2018 Trad_2242 7fbd8f75c4f70913afe411554fea759c 364 Gene3D G3DSA:3.90.550.10 34 296 3.0E-32 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Trad_2105 a91b2ac32a2d103ef43298a37c2d8d3d 176 Gene3D G3DSA:3.90.80.10 1 171 4.0E-59 T 15-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 Trad_2105 a91b2ac32a2d103ef43298a37c2d8d3d 176 Pfam PF00719 Inorganic pyrophosphatase 18 169 1.5E-51 T 15-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 Trad_2105 a91b2ac32a2d103ef43298a37c2d8d3d 176 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 170 32.26 T 15-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 Trad_2105 a91b2ac32a2d103ef43298a37c2d8d3d 176 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 65 71 - T 15-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 Trad_2105 a91b2ac32a2d103ef43298a37c2d8d3d 176 SUPERFAMILY SSF50324 5 174 4.58E-61 T 15-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 Trad_0884 45134a62307120b8c128214f8e298a9b 125 Pfam PF05239 PRC-barrel domain 14 87 1.9E-18 T 15-10-2018 IPR027275 PRC-barrel domain Trad_0884 45134a62307120b8c128214f8e298a9b 125 Gene3D G3DSA:2.30.30.240 2 91 2.7E-25 T 15-10-2018 Trad_0884 45134a62307120b8c128214f8e298a9b 125 SUPERFAMILY SSF50346 12 123 1.1E-24 T 15-10-2018 IPR011033 PRC-barrel-like superfamily Trad_1826 1ce8d51d9890adf0ac84fb5ae253c331 302 SUPERFAMILY SSF75005 10 291 7.44E-81 T 15-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily Trad_1826 1ce8d51d9890adf0ac84fb5ae253c331 302 Pfam PF04041 beta-1,4-mannooligosaccharide phosphorylase 21 298 3.9E-66 T 15-10-2018 IPR007184 Mannoside phosphorylase Trad_1826 1ce8d51d9890adf0ac84fb5ae253c331 302 PIRSF PIRSF016202 1 302 8.7E-101 T 15-10-2018 IPR007184 Mannoside phosphorylase Trad_1826 1ce8d51d9890adf0ac84fb5ae253c331 302 Gene3D G3DSA:2.115.10.20 2 302 5.2E-108 T 15-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily Trad_1737 15b8c5bbf03dd9423ef37c0d174a1129 339 SUPERFAMILY SSF52540 39 265 9.67E-71 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_1737 15b8c5bbf03dd9423ef37c0d174a1129 339 SMART SM00382 49 247 1.6E-18 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_1737 15b8c5bbf03dd9423ef37c0d174a1129 339 Gene3D G3DSA:3.40.50.300 23 291 1.1E-73 T 15-10-2018 Trad_1737 15b8c5bbf03dd9423ef37c0d174a1129 339 ProSitePatterns PS00211 ABC transporters family signature. 162 176 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Trad_1737 15b8c5bbf03dd9423ef37c0d174a1129 339 Pfam PF00005 ABC transporter 42 189 2.7E-29 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Trad_1737 15b8c5bbf03dd9423ef37c0d174a1129 339 SUPERFAMILY SSF54631 276 337 2.49E-6 T 15-10-2018 Trad_1737 15b8c5bbf03dd9423ef37c0d174a1129 339 Pfam PF00571 CBS domain 274 336 1.2E-6 T 15-10-2018 IPR000644 CBS domain Trad_2027 f83a91203b24848fb11e78fa72b26d74 90 Pfam PF11950 Protein of unknown function (DUF3467) 4 79 2.4E-22 T 15-10-2018 IPR021857 Protein of unknown function DUF3467 Trad_1169 645270043c9ceca9e6c6a80cebe74604 121 SUPERFAMILY SSF158446 8 115 3.27E-34 T 15-10-2018 IPR036583 23S rRNA-intervening sequence superfamily Trad_1169 645270043c9ceca9e6c6a80cebe74604 121 Gene3D G3DSA:1.20.1440.60 2 118 2.1E-38 T 15-10-2018 IPR036583 23S rRNA-intervening sequence superfamily Trad_1169 645270043c9ceca9e6c6a80cebe74604 121 Pfam PF05635 23S rRNA-intervening sequence protein 10 108 5.6E-35 T 15-10-2018 IPR012657 23S rRNA-intervening sequence protein Trad_1169 645270043c9ceca9e6c6a80cebe74604 121 TIGRFAM TIGR02436 TIGR02436: four helix bundle protein 13 116 1.2E-33 T 15-10-2018 IPR012657 23S rRNA-intervening sequence protein Trad_1447 dc5377e4696a9eda20813c03851b4791 419 Pfam PF03787 RAMP superfamily 10 67 7.1E-7 T 15-10-2018 IPR005537 CRISPR type III-associated RAMP protein Trad_1447 dc5377e4696a9eda20813c03851b4791 419 TIGRFAM TIGR01894 cas_TM1795_cmr1: CRISPR type III-B/RAMP module RAMP protein Cmr1 11 181 2.2E-13 T 15-10-2018 IPR007522 CRISPR-associated protein TM1795 Trad_0887 5d6fd9135715d160de965c0bc7252663 324 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 40 53 - T 15-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 Trad_0887 5d6fd9135715d160de965c0bc7252663 324 Gene3D G3DSA:3.40.50.1100 48 142 1.2E-103 T 15-10-2018 Trad_0887 5d6fd9135715d160de965c0bc7252663 324 SUPERFAMILY SSF53686 6 311 7.46E-85 T 15-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Trad_0887 5d6fd9135715d160de965c0bc7252663 324 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 19 304 3.6E-79 T 15-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Trad_0887 5d6fd9135715d160de965c0bc7252663 324 Gene3D G3DSA:3.40.50.1100 16 307 1.2E-103 T 15-10-2018 Trad_1053 a84066b471c335b8d815e2115423aa97 179 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 175 1.4E-71 T 15-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 Trad_1053 a84066b471c335b8d815e2115423aa97 179 PRINTS PR00059 Ribosomal protein L6 signature 71 96 7.2E-30 T 15-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 Trad_1053 a84066b471c335b8d815e2115423aa97 179 PRINTS PR00059 Ribosomal protein L6 signature 99 115 7.2E-30 T 15-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 Trad_1053 a84066b471c335b8d815e2115423aa97 179 PRINTS PR00059 Ribosomal protein L6 signature 141 162 7.2E-30 T 15-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 Trad_1053 a84066b471c335b8d815e2115423aa97 179 Gene3D G3DSA:3.90.930.12 83 179 9.6E-39 T 15-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Trad_1053 a84066b471c335b8d815e2115423aa97 179 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 37.148 T 15-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 Trad_1053 a84066b471c335b8d815e2115423aa97 179 SUPERFAMILY SSF56053 83 176 2.22E-34 T 15-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Trad_1053 a84066b471c335b8d815e2115423aa97 179 SUPERFAMILY SSF56053 1 82 3.01E-24 T 15-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Trad_1053 a84066b471c335b8d815e2115423aa97 179 Pfam PF00347 Ribosomal protein L6 12 82 6.0E-17 T 15-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Trad_1053 a84066b471c335b8d815e2115423aa97 179 Pfam PF00347 Ribosomal protein L6 91 164 2.9E-18 T 15-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Trad_1053 a84066b471c335b8d815e2115423aa97 179 Gene3D G3DSA:3.90.930.12 1 82 9.9E-30 T 15-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Trad_1053 a84066b471c335b8d815e2115423aa97 179 PIRSF PIRSF002162 1 177 4.2E-46 T 15-10-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Trad_1179 fbc66d8e50771e2f3ffef1aa809a4341 402 SUPERFAMILY SSF53474 165 263 2.46E-5 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold Trad_1179 fbc66d8e50771e2f3ffef1aa809a4341 402 Gene3D G3DSA:3.40.50.1820 128 314 2.8E-6 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold Trad_1179 fbc66d8e50771e2f3ffef1aa809a4341 402 Pfam PF03283 Pectinacetylesterase 59 224 8.9E-22 T 15-10-2018 IPR004963 Pectinacetylesterase/NOTUM GO:0016787 Reactome: R-HSA-381426|Reactome: R-HSA-5362798|Reactome: R-HSA-8957275 Trad_0801 ba541ca40f029d52d7ea5123ce960e22 159 Pfam PF04143 Sulphur transport 49 151 2.5E-9 T 15-10-2018 IPR007272 Sulphur transport domain Trad_2003 5e80d2e959d2e2b2c5d23df101ccc516 374 Pfam PF01476 LysM domain 73 114 4.5E-13 T 15-10-2018 IPR018392 LysM domain Trad_2003 5e80d2e959d2e2b2c5d23df101ccc516 374 Pfam PF01476 LysM domain 194 235 3.9E-11 T 15-10-2018 IPR018392 LysM domain Trad_2003 5e80d2e959d2e2b2c5d23df101ccc516 374 Pfam PF01476 LysM domain 26 68 2.8E-11 T 15-10-2018 IPR018392 LysM domain Trad_2003 5e80d2e959d2e2b2c5d23df101ccc516 374 Pfam PF01476 LysM domain 131 173 1.3E-11 T 15-10-2018 IPR018392 LysM domain Trad_2003 5e80d2e959d2e2b2c5d23df101ccc516 374 Gene3D G3DSA:2.70.70.10 239 371 1.9E-44 T 15-10-2018 IPR011055 Duplicated hybrid motif Trad_2003 5e80d2e959d2e2b2c5d23df101ccc516 374 Gene3D G3DSA:3.10.350.10 120 181 3.5E-15 T 15-10-2018 IPR036779 LysM domain superfamily Trad_2003 5e80d2e959d2e2b2c5d23df101ccc516 374 Gene3D G3DSA:3.10.350.10 17 70 7.1E-14 T 15-10-2018 IPR036779 LysM domain superfamily Trad_2003 5e80d2e959d2e2b2c5d23df101ccc516 374 SMART SM00257 192 235 7.2E-12 T 15-10-2018 IPR018392 LysM domain Trad_2003 5e80d2e959d2e2b2c5d23df101ccc516 374 SMART SM00257 25 68 2.7E-11 T 15-10-2018 IPR018392 LysM domain Trad_2003 5e80d2e959d2e2b2c5d23df101ccc516 374 SMART SM00257 72 115 1.8E-13 T 15-10-2018 IPR018392 LysM domain Trad_2003 5e80d2e959d2e2b2c5d23df101ccc516 374 SMART SM00257 129 173 5.7E-12 T 15-10-2018 IPR018392 LysM domain Trad_2003 5e80d2e959d2e2b2c5d23df101ccc516 374 SUPERFAMILY SSF54106 128 174 2.09E-8 T 15-10-2018 Trad_2003 5e80d2e959d2e2b2c5d23df101ccc516 374 Gene3D G3DSA:3.10.350.10 188 238 4.0E-14 T 15-10-2018 IPR036779 LysM domain superfamily Trad_2003 5e80d2e959d2e2b2c5d23df101ccc516 374 Gene3D G3DSA:3.10.350.10 71 119 6.8E-16 T 15-10-2018 IPR036779 LysM domain superfamily Trad_2003 5e80d2e959d2e2b2c5d23df101ccc516 374 SUPERFAMILY SSF54106 24 68 8.89E-10 T 15-10-2018 Trad_2003 5e80d2e959d2e2b2c5d23df101ccc516 374 SUPERFAMILY SSF51261 230 367 3.35E-53 T 15-10-2018 IPR011055 Duplicated hybrid motif Trad_2003 5e80d2e959d2e2b2c5d23df101ccc516 374 SUPERFAMILY SSF54106 72 114 7.98E-11 T 15-10-2018 Trad_2003 5e80d2e959d2e2b2c5d23df101ccc516 374 SUPERFAMILY SSF54106 194 235 8.63E-9 T 15-10-2018 Trad_2003 5e80d2e959d2e2b2c5d23df101ccc516 374 Pfam PF01551 Peptidase family M23 270 363 1.0E-31 T 15-10-2018 IPR016047 Peptidase M23 Trad_1739 12605dd829e43d3ee952a3e1c2b9ce70 820 Pfam PF13802 Galactose mutarotase-like 158 225 8.0E-13 T 15-10-2018 IPR025887 Glycoside hydrolase family 31, N-terminal domain Trad_1739 12605dd829e43d3ee952a3e1c2b9ce70 820 Pfam PF17137 Domain of unknown function (DUF5110) 712 776 4.8E-13 T 15-10-2018 IPR033403 Domain of unknown function DUF5110 Trad_1739 12605dd829e43d3ee952a3e1c2b9ce70 820 Gene3D G3DSA:2.60.40.1760 18 251 1.0E-35 T 15-10-2018 Trad_1739 12605dd829e43d3ee952a3e1c2b9ce70 820 SUPERFAMILY SSF51445 256 612 2.63E-97 T 15-10-2018 IPR017853 Glycoside hydrolase superfamily Trad_1739 12605dd829e43d3ee952a3e1c2b9ce70 820 Pfam PF16338 Domain of unknown function (DUF4968) 27 116 6.1E-8 T 15-10-2018 IPR032513 Alpha-glucosidase, domain of unknown function DUF4968 Trad_1739 12605dd829e43d3ee952a3e1c2b9ce70 820 ProSitePatterns PS00129 Glycosyl hydrolases family 31 active site. 419 426 - T 15-10-2018 IPR030458 Glycosyl hydrolases family 31, active site Trad_1739 12605dd829e43d3ee952a3e1c2b9ce70 820 SUPERFAMILY SSF74650 6 253 5.34E-39 T 15-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 Trad_1739 12605dd829e43d3ee952a3e1c2b9ce70 820 Gene3D G3DSA:3.20.20.80 254 615 2.8E-141 T 15-10-2018 Trad_1739 12605dd829e43d3ee952a3e1c2b9ce70 820 Gene3D G3DSA:2.60.40.1180 616 692 2.9E-25 T 15-10-2018 IPR013780 Glycosyl hydrolase, all-beta Trad_1739 12605dd829e43d3ee952a3e1c2b9ce70 820 Gene3D G3DSA:2.60.40.1180 693 808 4.3E-11 T 15-10-2018 IPR013780 Glycosyl hydrolase, all-beta Trad_1739 12605dd829e43d3ee952a3e1c2b9ce70 820 Pfam PF01055 Glycosyl hydrolases family 31 246 697 4.2E-162 T 15-10-2018 IPR000322 Glycoside hydrolase family 31 GO:0004553|GO:0005975 Trad_1739 12605dd829e43d3ee952a3e1c2b9ce70 820 SUPERFAMILY SSF51011 614 693 1.44E-21 T 15-10-2018 Trad_2481 f82d5b61c2d33ecc334401cf37b868d2 182 SMART SM00739 128 155 3.4E-5 T 15-10-2018 IPR005824 KOW Trad_2481 f82d5b61c2d33ecc334401cf37b868d2 182 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 5 181 6.4E-57 T 15-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 Trad_2481 f82d5b61c2d33ecc334401cf37b868d2 182 SUPERFAMILY SSF50104 126 181 2.54E-18 T 15-10-2018 IPR008991 Translation protein SH3-like domain superfamily Trad_2481 f82d5b61c2d33ecc334401cf37b868d2 182 Gene3D G3DSA:3.30.70.940 2 119 2.2E-40 T 15-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 Trad_2481 f82d5b61c2d33ecc334401cf37b868d2 182 Pfam PF00467 KOW motif 131 163 2.0E-8 T 15-10-2018 IPR005824 KOW Trad_2481 f82d5b61c2d33ecc334401cf37b868d2 182 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 2 182 24.668 T 15-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 Trad_2481 f82d5b61c2d33ecc334401cf37b868d2 182 Pfam PF02357 Transcription termination factor nusG 4 113 1.8E-22 T 15-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 Trad_2481 f82d5b61c2d33ecc334401cf37b868d2 182 ProSitePatterns PS01014 Transcription termination factor nusG signature. 165 174 - T 15-10-2018 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site Trad_2481 f82d5b61c2d33ecc334401cf37b868d2 182 SUPERFAMILY SSF82679 4 118 7.19E-34 T 15-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 Trad_2481 f82d5b61c2d33ecc334401cf37b868d2 182 SMART SM00738 2 117 1.6E-37 T 15-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 Trad_2481 f82d5b61c2d33ecc334401cf37b868d2 182 Gene3D G3DSA:2.30.30.30 121 181 1.6E-25 T 15-10-2018 IPR014722 Ribosomal protein L2, domain 2 Trad_2481 f82d5b61c2d33ecc334401cf37b868d2 182 PRINTS PR00338 Transcription termination factor NUSG signature 140 155 1.7E-21 T 15-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 Trad_2481 f82d5b61c2d33ecc334401cf37b868d2 182 PRINTS PR00338 Transcription termination factor NUSG signature 158 174 1.7E-21 T 15-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 Trad_2481 f82d5b61c2d33ecc334401cf37b868d2 182 PRINTS PR00338 Transcription termination factor NUSG signature 58 70 1.7E-21 T 15-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 Trad_1278 087ba47f7f3c128166b24bbc61993ab8 306 TIGRFAM TIGR01859 fruc_bis_ald_: fructose-1,6-bisphosphate aldolase, class II 5 306 2.4E-109 T 15-10-2018 IPR011289 Fructose-1,6-bisphosphate aldolase, class 2 GO:0004332|GO:0006096|GO:0008270|GO:0030388 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 Trad_1278 087ba47f7f3c128166b24bbc61993ab8 306 PIRSF PIRSF001359 1 306 8.5E-102 T 15-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 Trad_1278 087ba47f7f3c128166b24bbc61993ab8 306 Pfam PF01116 Fructose-bisphosphate aldolase class-II 7 305 7.5E-96 T 15-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 Trad_1278 087ba47f7f3c128166b24bbc61993ab8 306 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 8 306 1.4E-89 T 15-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 Trad_1278 087ba47f7f3c128166b24bbc61993ab8 306 SUPERFAMILY SSF51569 3 306 2.05E-100 T 15-10-2018 Trad_1278 087ba47f7f3c128166b24bbc61993ab8 306 Gene3D G3DSA:3.20.20.70 3 306 1.8E-123 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Trad_1278 087ba47f7f3c128166b24bbc61993ab8 306 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 130 141 - T 15-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 Trad_1927 d6188d7f9cc270be1558aab580d9c302 407 Pfam PF01963 TraB family 18 242 3.1E-22 T 15-10-2018 IPR002816 Pheromone shutdown, TraB Trad_1927 d6188d7f9cc270be1558aab580d9c302 407 TIGRFAM TIGR00261 traB: TraB family protein 24 404 9.2E-86 T 15-10-2018 IPR005230 Pheromone shutdown, TraB, bacterial/archaeal Trad_2381 4de83ea1a7b16a2aee07daf011c3004e 690 Pfam PF11258 Protein of unknown function (DUF3048) N-terminal domain 424 546 3.4E-31 T 15-10-2018 IPR021416 Protein of unknown function DUF3048, N-terminal Trad_2381 4de83ea1a7b16a2aee07daf011c3004e 690 SUPERFAMILY SSF159774 424 685 4.32E-51 T 15-10-2018 IPR023158 YerB-like superfamily Trad_2381 4de83ea1a7b16a2aee07daf011c3004e 690 Gene3D G3DSA:3.50.90.10 408 689 6.7E-49 T 15-10-2018 IPR023158 YerB-like superfamily Trad_2381 4de83ea1a7b16a2aee07daf011c3004e 690 Pfam PF17479 Protein of unknown function (DUF3048) C-terminal domain 571 679 1.2E-6 T 15-10-2018 IPR035328 Protein of unknown function DUF3048, C-terminal domain Trad_1345 535e1fc04b635a755dfc550c79e000e5 581 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 85 241 4.5E-29 T 15-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Trad_1345 535e1fc04b635a755dfc550c79e000e5 581 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 4 581 14.452 T 15-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 Trad_1345 535e1fc04b635a755dfc550c79e000e5 581 SUPERFAMILY SSF50447 484 579 1.35E-29 T 15-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Trad_1345 535e1fc04b635a755dfc550c79e000e5 581 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 3 49 4.0E-16 T 15-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal Trad_1345 535e1fc04b635a755dfc550c79e000e5 581 Gene3D G3DSA:2.40.30.10 252 372 1.6E-37 T 15-10-2018 Trad_1345 535e1fc04b635a755dfc550c79e000e5 581 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 2 579 2.5E-203 T 15-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 Trad_1345 535e1fc04b635a755dfc550c79e000e5 581 Pfam PF00009 Elongation factor Tu GTP binding domain 86 243 5.4E-33 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Trad_1345 535e1fc04b635a755dfc550c79e000e5 581 Pfam PF11987 Translation-initiation factor 2 379 473 2.0E-25 T 15-10-2018 IPR023115 Translation initiation factor IF- 2, domain 3 Trad_1345 535e1fc04b635a755dfc550c79e000e5 581 Gene3D G3DSA:3.40.50.300 80 251 4.1E-69 T 15-10-2018 Trad_1345 535e1fc04b635a755dfc550c79e000e5 581 Gene3D G3DSA:3.40.50.10050 376 484 8.7E-30 T 15-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily Trad_1345 535e1fc04b635a755dfc550c79e000e5 581 Gene3D G3DSA:2.40.30.10 485 581 2.3E-31 T 15-10-2018 Trad_1345 535e1fc04b635a755dfc550c79e000e5 581 SUPERFAMILY SSF52540 81 247 1.04E-49 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_1345 535e1fc04b635a755dfc550c79e000e5 581 Gene3D G3DSA:1.10.10.2480 1 66 1.8E-21 T 15-10-2018 Trad_1345 535e1fc04b635a755dfc550c79e000e5 581 SUPERFAMILY SSF50447 255 335 1.45E-20 T 15-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Trad_1345 535e1fc04b635a755dfc550c79e000e5 581 ProSitePatterns PS01176 Initiation factor 2 signature. 534 556 - T 15-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 Trad_1345 535e1fc04b635a755dfc550c79e000e5 581 SUPERFAMILY SSF52156 379 490 2.09E-28 T 15-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily Trad_2482 11e012eba15620fdcc95ad12a3117677 59 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 7 35 - T 15-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Trad_2482 11e012eba15620fdcc95ad12a3117677 59 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 5 58 1.8E-17 T 15-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 Trad_2482 11e012eba15620fdcc95ad12a3117677 59 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 6 58 9.4E-19 T 15-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Trad_2482 11e012eba15620fdcc95ad12a3117677 59 Gene3D G3DSA:1.20.5.1030 2 58 4.5E-19 T 15-10-2018 IPR038379 SecE superfamily Trad_2482 11e012eba15620fdcc95ad12a3117677 59 Hamap MF_00422 Protein translocase subunit SecE [secE]. 2 57 11.622 T 15-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Trad_2534 788ed5521ff3e141e434fb8c0e749699 398 Pfam PF00067 Cytochrome P450 180 366 1.3E-21 T 15-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Trad_2534 788ed5521ff3e141e434fb8c0e749699 398 PRINTS PR00359 B-class P450 signature 192 214 1.9E-43 T 15-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Trad_2534 788ed5521ff3e141e434fb8c0e749699 398 PRINTS PR00359 B-class P450 signature 275 286 1.9E-43 T 15-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Trad_2534 788ed5521ff3e141e434fb8c0e749699 398 PRINTS PR00359 B-class P450 signature 350 361 1.9E-43 T 15-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Trad_2534 788ed5521ff3e141e434fb8c0e749699 398 PRINTS PR00359 B-class P450 signature 149 164 1.9E-43 T 15-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Trad_2534 788ed5521ff3e141e434fb8c0e749699 398 PRINTS PR00359 B-class P450 signature 292 319 1.9E-43 T 15-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Trad_2534 788ed5521ff3e141e434fb8c0e749699 398 PRINTS PR00359 B-class P450 signature 341 350 1.9E-43 T 15-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Trad_2534 788ed5521ff3e141e434fb8c0e749699 398 PRINTS PR00359 B-class P450 signature 132 148 1.9E-43 T 15-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Trad_2534 788ed5521ff3e141e434fb8c0e749699 398 PRINTS PR00359 B-class P450 signature 320 335 1.9E-43 T 15-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Trad_2534 788ed5521ff3e141e434fb8c0e749699 398 PRINTS PR00359 B-class P450 signature 84 95 1.9E-43 T 15-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Trad_2534 788ed5521ff3e141e434fb8c0e749699 398 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 343 352 - T 15-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 Trad_2534 788ed5521ff3e141e434fb8c0e749699 398 SUPERFAMILY SSF48264 5 397 1.14E-87 T 15-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 Trad_2534 788ed5521ff3e141e434fb8c0e749699 398 Gene3D G3DSA:1.10.630.10 2 398 9.8E-126 T 15-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 Trad_1908 53cecb3aeac7794f3b3f30247c2038a8 279 SUPERFAMILY SSF52540 1 234 5.44E-64 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_1908 53cecb3aeac7794f3b3f30247c2038a8 279 Pfam PF00005 ABC transporter 18 174 2.2E-35 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Trad_1908 53cecb3aeac7794f3b3f30247c2038a8 279 Gene3D G3DSA:3.40.50.300 1 268 9.3E-71 T 15-10-2018 Trad_1908 53cecb3aeac7794f3b3f30247c2038a8 279 SMART SM00382 27 231 6.7E-17 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_1908 53cecb3aeac7794f3b3f30247c2038a8 279 TIGRFAM TIGR02315 ABC_phnC: phosphonate ABC transporter, ATP-binding protein 1 243 3.0E-96 T 15-10-2018 IPR012693 ABC transporter, phosphonate import, PhnC GO:0005524|GO:0015416|GO:0015716|GO:0016020 Trad_1908 53cecb3aeac7794f3b3f30247c2038a8 279 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Trad_0564 ba977034fea2316a8183b52fcb0c8994 195 SUPERFAMILY SSF52402 8 185 1.53E-40 T 15-10-2018 Trad_0564 ba977034fea2316a8183b52fcb0c8994 195 Gene3D G3DSA:3.40.50.620 1 123 3.6E-11 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Trad_0564 ba977034fea2316a8183b52fcb0c8994 195 Gene3D G3DSA:3.90.1490.10 125 189 5.7E-6 T 15-10-2018 Trad_0564 ba977034fea2316a8183b52fcb0c8994 195 Pfam PF01902 Diphthamide synthase 8 176 2.9E-21 T 15-10-2018 IPR002761 Diphthamide synthase domain MetaCyc: PWY-6482|MetaCyc: PWY-7546|Reactome: R-HSA-5358493 Trad_1988 09d5e3ba5594dedf0bed613acd91fe42 399 Gene3D G3DSA:1.10.260.40 28 111 2.1E-17 T 15-10-2018 Trad_1988 09d5e3ba5594dedf0bed613acd91fe42 399 Pfam PF13464 Domain of unknown function (DUF4115) 320 392 1.4E-10 T 15-10-2018 IPR025194 Domain of unknown function DUF4115 Trad_1988 09d5e3ba5594dedf0bed613acd91fe42 399 Pfam PF13413 Helix-turn-helix domain 37 96 4.4E-16 T 15-10-2018 Trad_0616 c35851d829309f78838afefce50d3f35 281 Gene3D G3DSA:1.10.3720.10 2 272 1.0E-56 T 15-10-2018 IPR035906 MetI-like superfamily Trad_0616 c35851d829309f78838afefce50d3f35 281 SUPERFAMILY SSF161098 7 281 6.92E-63 T 15-10-2018 IPR035906 MetI-like superfamily Trad_0616 c35851d829309f78838afefce50d3f35 281 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 88 272 6.6E-17 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Trad_2193 5a58e67bd2e5a0a89f3b494563b5216d 502 Pfam PF01593 Flavin containing amine oxidoreductase 17 493 7.3E-30 T 15-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 Trad_2193 5a58e67bd2e5a0a89f3b494563b5216d 502 ProSitePatterns PS00982 Bacterial-type phytoene dehydrogenase signature. 471 491 - T 15-10-2018 IPR008150 Phytoene dehydrogenase, bacterial-type, conserved site Trad_2193 5a58e67bd2e5a0a89f3b494563b5216d 502 TIGRFAM TIGR02734 crtI_fam: phytoene desaturase 5 499 2.5E-177 T 15-10-2018 IPR014105 Carotenoid/retinoid oxidoreductase GO:0016117|GO:0055114 Trad_2193 5a58e67bd2e5a0a89f3b494563b5216d 502 SUPERFAMILY SSF51905 2 496 5.51E-73 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Trad_2193 5a58e67bd2e5a0a89f3b494563b5216d 502 Gene3D G3DSA:3.50.50.60 2 89 2.8E-23 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Trad_2193 5a58e67bd2e5a0a89f3b494563b5216d 502 Gene3D G3DSA:3.50.50.60 198 328 1.2E-20 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Trad_2243 6646902042fd0a3f4cec6b27c53b6396 713 Pfam PF01553 Acyltransferase 530 635 4.0E-8 T 15-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 Trad_2243 6646902042fd0a3f4cec6b27c53b6396 713 SMART SM00563 533 638 1.4E-15 T 15-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 Trad_2243 6646902042fd0a3f4cec6b27c53b6396 713 Pfam PF04240 Carotenoid biosynthesis protein 281 464 2.2E-35 T 15-10-2018 IPR007354 Carotene biosynthesis associated membrane protein Trad_2243 6646902042fd0a3f4cec6b27c53b6396 713 SUPERFAMILY SSF69593 519 639 1.83E-15 T 15-10-2018 Trad_2243 6646902042fd0a3f4cec6b27c53b6396 713 TIGRFAM TIGR03462 CarR_dom_SF: lycopene cyclase domain 1 93 1.1E-18 T 15-10-2018 IPR017825 Lycopene cyclase domain GO:0016872 KEGG: 00906+2.5.1.32+5.5.1.19|MetaCyc: PWY-5943|MetaCyc: PWY-5947|MetaCyc: PWY-6279|MetaCyc: PWY-7591|MetaCyc: PWY-7938|MetaCyc: PWY-7939|MetaCyc: PWY-7947 Trad_2243 6646902042fd0a3f4cec6b27c53b6396 713 TIGRFAM TIGR03462 CarR_dom_SF: lycopene cyclase domain 142 230 6.0E-21 T 15-10-2018 IPR017825 Lycopene cyclase domain GO:0016872 KEGG: 00906+2.5.1.32+5.5.1.19|MetaCyc: PWY-5943|MetaCyc: PWY-5947|MetaCyc: PWY-6279|MetaCyc: PWY-7591|MetaCyc: PWY-7938|MetaCyc: PWY-7939|MetaCyc: PWY-7947 Trad_0488 5416729fdf20890033fdb3c09fc75541 285 Gene3D G3DSA:3.40.190.10 2 89 1.6E-26 T 15-10-2018 Trad_0488 5416729fdf20890033fdb3c09fc75541 285 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 224 231 - T 15-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 Trad_0488 5416729fdf20890033fdb3c09fc75541 285 Gene3D G3DSA:3.40.190.10 90 174 4.7E-29 T 15-10-2018 Trad_0488 5416729fdf20890033fdb3c09fc75541 285 PIRSF PIRSF001500 1 279 1.7E-78 T 15-10-2018 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 Trad_0488 5416729fdf20890033fdb3c09fc75541 285 Gene3D G3DSA:3.30.70.260 191 278 3.4E-31 T 15-10-2018 Trad_0488 5416729fdf20890033fdb3c09fc75541 285 Pfam PF00800 Prephenate dehydratase 7 186 2.4E-59 T 15-10-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 Trad_0488 5416729fdf20890033fdb3c09fc75541 285 SUPERFAMILY SSF53850 6 190 8.47E-59 T 15-10-2018 Trad_0488 5416729fdf20890033fdb3c09fc75541 285 SUPERFAMILY SSF55021 180 276 1.09E-26 T 15-10-2018 Trad_0404 e328f68d627041e253d028ff8b127174 131 Pfam PF02675 S-adenosylmethionine decarboxylase 8 113 1.3E-39 T 15-10-2018 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 Trad_0404 e328f68d627041e253d028ff8b127174 131 Hamap MF_00464 S-adenosylmethionine decarboxylase proenzyme [speH]. 1 117 31.412 T 15-10-2018 IPR017716 S-adenosylmethionine decarboxylase proenzyme GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 Trad_0404 e328f68d627041e253d028ff8b127174 131 Gene3D G3DSA:3.30.360.110 1 62 1.0E-25 T 15-10-2018 Trad_0404 e328f68d627041e253d028ff8b127174 131 TIGRFAM TIGR03330 SAM_DCase_Bsu: S-adenosylmethionine decarboxylase proenzyme 3 113 5.2E-44 T 15-10-2018 IPR017716 S-adenosylmethionine decarboxylase proenzyme GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 Trad_0404 e328f68d627041e253d028ff8b127174 131 Gene3D G3DSA:3.30.160.750 63 128 1.5E-24 T 15-10-2018 Trad_0404 e328f68d627041e253d028ff8b127174 131 SUPERFAMILY SSF56276 3 115 1.26E-38 T 15-10-2018 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 Trad_1877 c8176f0ab050ea29a19be67bcb7fda62 397 SUPERFAMILY SSF51658 40 269 1.15E-29 T 15-10-2018 IPR036237 Xylose isomerase-like superfamily Trad_1877 c8176f0ab050ea29a19be67bcb7fda62 397 Gene3D G3DSA:3.20.20.150 45 371 2.2E-12 T 15-10-2018 Trad_0592 d2de8b94e3e2573b5be1e8720b739d91 398 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 4 383 7.8E-161 T 15-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 Trad_0592 d2de8b94e3e2573b5be1e8720b739d91 398 Gene3D G3DSA:1.10.8.60 296 398 1.3E-30 T 15-10-2018 Trad_0592 d2de8b94e3e2573b5be1e8720b739d91 398 SMART SM01086 297 389 1.0E-23 T 15-10-2018 IPR019489 Clp ATPase, C-terminal Trad_0592 d2de8b94e3e2573b5be1e8720b739d91 398 Gene3D G3DSA:3.40.50.300 50 295 1.4E-96 T 15-10-2018 Trad_0592 d2de8b94e3e2573b5be1e8720b739d91 398 Gene3D G3DSA:3.30.50.30 2 44 4.3E-8 T 15-10-2018 IPR038366 Zinc finger, ClpX C4-type superfamily Trad_0592 d2de8b94e3e2573b5be1e8720b739d91 398 Pfam PF06689 ClpX C4-type zinc finger 5 43 2.6E-11 T 15-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 Trad_0592 d2de8b94e3e2573b5be1e8720b739d91 398 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 297 368 6.5E-10 T 15-10-2018 IPR019489 Clp ATPase, C-terminal Trad_0592 d2de8b94e3e2573b5be1e8720b739d91 398 SMART SM00382 97 254 7.0E-12 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_0592 d2de8b94e3e2573b5be1e8720b739d91 398 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 2 394 46.222 T 15-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 Trad_0592 d2de8b94e3e2573b5be1e8720b739d91 398 SMART SM00994 3 44 4.7E-8 T 15-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 Trad_0592 d2de8b94e3e2573b5be1e8720b739d91 398 SUPERFAMILY SSF52540 54 382 2.94E-66 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_0592 d2de8b94e3e2573b5be1e8720b739d91 398 Pfam PF07724 AAA domain (Cdc48 subfamily) 97 289 2.7E-46 T 15-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Trad_1849 a487fa6a62196341d8d78490069e38d2 367 SMART SM00382 57 262 1.8E-12 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_1849 a487fa6a62196341d8d78490069e38d2 367 Gene3D G3DSA:3.40.50.300 19 357 4.1E-103 T 15-10-2018 Trad_1849 a487fa6a62196341d8d78490069e38d2 367 Pfam PF00005 ABC transporter 49 204 2.5E-31 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Trad_1849 a487fa6a62196341d8d78490069e38d2 367 ProSitePatterns PS00211 ABC transporters family signature. 177 191 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Trad_1849 a487fa6a62196341d8d78490069e38d2 367 SUPERFAMILY SSF52540 21 275 9.4E-71 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_1849 a487fa6a62196341d8d78490069e38d2 367 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 256 323 3.6E-17 T 15-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Trad_1849 a487fa6a62196341d8d78490069e38d2 367 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 254 343 4.5E-27 T 15-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Trad_1975 67a6061c5abdf1c9a81620ca0e98a806 422 PIRSF PIRSF006060 2 420 4.2E-59 T 15-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Trad_1975 67a6061c5abdf1c9a81620ca0e98a806 422 Pfam PF00324 Amino acid permease 13 396 4.4E-38 T 15-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 Trad_1975 67a6061c5abdf1c9a81620ca0e98a806 422 Gene3D G3DSA:1.20.1740.10 2 422 8.1E-87 T 15-10-2018 Trad_0843 3406072ade4bb49fe848fab9fa2a9bb3 336 SUPERFAMILY SSF55347 132 297 8.5E-28 T 15-10-2018 Trad_0843 3406072ade4bb49fe848fab9fa2a9bb3 336 Gene3D G3DSA:3.40.50.720 6 309 6.9E-84 T 15-10-2018 Trad_0843 3406072ade4bb49fe848fab9fa2a9bb3 336 SUPERFAMILY SSF51735 4 152 5.44E-40 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_0843 3406072ade4bb49fe848fab9fa2a9bb3 336 Gene3D G3DSA:3.30.360.10 132 328 6.9E-84 T 15-10-2018 Trad_0843 3406072ade4bb49fe848fab9fa2a9bb3 336 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 26 123 1.0E-19 T 15-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 Trad_0843 3406072ade4bb49fe848fab9fa2a9bb3 336 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 136 226 2.5E-10 T 15-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 Trad_2952 609e4586e8b84ca2c5bdb338a9d8a36c 297 Pfam PF01715 IPP transferase 32 271 2.0E-68 T 15-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 Trad_2952 609e4586e8b84ca2c5bdb338a9d8a36c 297 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 1 294 26.15 T 15-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 Trad_2952 609e4586e8b84ca2c5bdb338a9d8a36c 297 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 1 271 3.0E-74 T 15-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 Trad_2952 609e4586e8b84ca2c5bdb338a9d8a36c 297 Gene3D G3DSA:1.10.20.140 106 173 3.6E-88 T 15-10-2018 Trad_2952 609e4586e8b84ca2c5bdb338a9d8a36c 297 SUPERFAMILY SSF52540 2 134 1.74E-17 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_2952 609e4586e8b84ca2c5bdb338a9d8a36c 297 Gene3D G3DSA:3.40.50.300 3 273 3.6E-88 T 15-10-2018 Trad_2890 70d6989198fe18af063b7c314798f202 337 SUPERFAMILY SSF53822 61 334 4.54E-61 T 15-10-2018 IPR028082 Periplasmic binding protein-like I Trad_2890 70d6989198fe18af063b7c314798f202 337 Pfam PF13377 Periplasmic binding protein-like domain 170 331 8.8E-34 T 15-10-2018 Trad_2890 70d6989198fe18af063b7c314798f202 337 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 48 2.8E-12 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Trad_2890 70d6989198fe18af063b7c314798f202 337 Gene3D G3DSA:3.40.50.2300 162 328 2.0E-63 T 15-10-2018 Trad_2890 70d6989198fe18af063b7c314798f202 337 SUPERFAMILY SSF47413 2 59 2.44E-13 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Trad_2890 70d6989198fe18af063b7c314798f202 337 Gene3D G3DSA:3.40.50.2300 62 323 2.0E-63 T 15-10-2018 Trad_2890 70d6989198fe18af063b7c314798f202 337 Gene3D G3DSA:1.10.260.40 1 57 2.8E-15 T 15-10-2018 Trad_2890 70d6989198fe18af063b7c314798f202 337 SMART SM00354 1 71 1.2E-21 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Trad_2198 c52075b33fa0181b7031017b86db938f 242 Gene3D G3DSA:3.40.50.1580 12 239 5.2E-65 T 15-10-2018 Trad_2198 c52075b33fa0181b7031017b86db938f 242 SUPERFAMILY SSF53167 15 238 2.75E-64 T 15-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 Trad_2198 c52075b33fa0181b7031017b86db938f 242 Pfam PF01048 Phosphorylase superfamily 15 236 1.6E-51 T 15-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 Trad_2198 c52075b33fa0181b7031017b86db938f 242 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 15 238 2.1E-57 T 15-10-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 Trad_1669 c0c8ab9a50b09da36883e9655d9551f4 418 TIGRFAM TIGR02549 CRISPR_DxTHG: CRISPR-associated DxTHG motif protein 101 115 1.9E-4 T 15-10-2018 IPR013383 CRISPR-associated protein DxTHG, conserved site Trad_1669 c0c8ab9a50b09da36883e9655d9551f4 418 Pfam PF09455 CRISPR-associated (Cas) DxTHG family 3 377 8.0E-66 T 15-10-2018 IPR019016 CRISPR-associated DxTHG protein Trad_1669 c0c8ab9a50b09da36883e9655d9551f4 418 TIGRFAM TIGR02221 cas_TM1812: CRISPR-associated protein, TM1812 family 58 185 1.1E-30 T 15-10-2018 IPR011742 CRISPR-associated protein, TM1812 Trad_1669 c0c8ab9a50b09da36883e9655d9551f4 418 SUPERFAMILY SSF160980 11 380 5.23E-5 T 15-10-2018 Trad_0684 f25471acf54a19fefc950dc095faa459 371 SUPERFAMILY SSF53756 1 362 1.92E-109 T 15-10-2018 Trad_0684 f25471acf54a19fefc950dc095faa459 371 Gene3D G3DSA:3.40.50.2000 185 341 1.3E-125 T 15-10-2018 Trad_0684 f25471acf54a19fefc950dc095faa459 371 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 1 354 5.4E-112 T 15-10-2018 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 Trad_0684 f25471acf54a19fefc950dc095faa459 371 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 20 354 5.6E-99 T 15-10-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 Trad_0684 f25471acf54a19fefc950dc095faa459 371 Gene3D G3DSA:3.40.50.2000 3 346 1.3E-125 T 15-10-2018 Trad_1973 4ed69a62abcb872b5c4a97e500ce0e98 207 Pfam PF09335 SNARE associated Golgi protein 32 161 3.0E-14 T 15-10-2018 IPR032816 SNARE associated Golgi protein Trad_2794 0d9277397bb1f0ebeb8aa3f8f629f8a6 79 SUPERFAMILY SSF47336 1 78 1.09E-23 T 15-10-2018 IPR036736 ACP-like superfamily Trad_2794 0d9277397bb1f0ebeb8aa3f8f629f8a6 79 ProSitePatterns PS00012 Phosphopantetheine attachment site. 34 49 - T 15-10-2018 IPR006162 Phosphopantetheine attachment site Trad_2794 0d9277397bb1f0ebeb8aa3f8f629f8a6 79 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 4 78 8.1E-32 T 15-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 Trad_2794 0d9277397bb1f0ebeb8aa3f8f629f8a6 79 Gene3D G3DSA:1.10.1200.10 1 79 1.1E-29 T 15-10-2018 IPR036736 ACP-like superfamily Trad_2794 0d9277397bb1f0ebeb8aa3f8f629f8a6 79 Hamap MF_01217 Acyl carrier protein [acpP]. 5 79 22.088 T 15-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 Trad_2794 0d9277397bb1f0ebeb8aa3f8f629f8a6 79 SMART SM00823 Phosphopantetheine attachment site 7 65 0.0099 T 15-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Trad_2794 0d9277397bb1f0ebeb8aa3f8f629f8a6 79 Pfam PF00550 Phosphopantetheine attachment site 9 75 1.2E-14 T 15-10-2018 IPR009081 Phosphopantetheine binding ACP domain Trad_2794 0d9277397bb1f0ebeb8aa3f8f629f8a6 79 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 43 78 1.0E-9 T 15-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 Trad_2904 5b33b3dbe75325e58d5053de8c87f08b 119 Gene3D G3DSA:3.30.70.100 1 104 4.5E-36 T 15-10-2018 Trad_2904 5b33b3dbe75325e58d5053de8c87f08b 119 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 76 2.8E-22 T 15-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain Trad_2904 5b33b3dbe75325e58d5053de8c87f08b 119 SUPERFAMILY SSF54909 1 101 4.65E-29 T 15-10-2018 IPR011008 Dimeric alpha-beta barrel Trad_0206 8faaecf27a7007adcd6ce72cadc3c4b1 332 Gene3D G3DSA:3.40.50.720 1 182 7.9E-79 T 15-10-2018 Trad_0206 8faaecf27a7007adcd6ce72cadc3c4b1 332 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 15 178 7.3E-77 T 15-10-2018 IPR013116 Ketol-acid reductoisomerase, N-terminal KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 Trad_0206 8faaecf27a7007adcd6ce72cadc3c4b1 332 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 2 329 44.033 T 15-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 Trad_0206 8faaecf27a7007adcd6ce72cadc3c4b1 332 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 184 326 1.5E-64 T 15-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 Trad_0206 8faaecf27a7007adcd6ce72cadc3c4b1 332 Gene3D G3DSA:1.10.3730.40 183 332 4.8E-68 T 15-10-2018 Trad_0206 8faaecf27a7007adcd6ce72cadc3c4b1 332 SUPERFAMILY SSF48179 184 328 6.97E-66 T 15-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Trad_0206 8faaecf27a7007adcd6ce72cadc3c4b1 332 PIRSF PIRSF000116 202 330 1.8E-11 T 15-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 Trad_0206 8faaecf27a7007adcd6ce72cadc3c4b1 332 PIRSF PIRSF000116 5 207 5.2E-38 T 15-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 Trad_0206 8faaecf27a7007adcd6ce72cadc3c4b1 332 SUPERFAMILY SSF51735 3 183 1.05E-74 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_0206 8faaecf27a7007adcd6ce72cadc3c4b1 332 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 15 326 3.3E-138 T 15-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 Trad_1009 69a2ecf8b0b711b592cb72f29f7b725e 564 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 152 158 - T 15-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Trad_1009 69a2ecf8b0b711b592cb72f29f7b725e 564 Pfam PF07669 Eco57I restriction-modification methylase 148 259 4.0E-11 T 15-10-2018 IPR011639 Restriction modification methylase Eco57I GO:0003677|GO:0003824|GO:0006304 Trad_1009 69a2ecf8b0b711b592cb72f29f7b725e 564 SUPERFAMILY SSF53335 20 260 9.1E-37 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Trad_1009 69a2ecf8b0b711b592cb72f29f7b725e 564 Pfam PF12950 TaqI-like C-terminal specificity domain 405 514 1.1E-6 T 15-10-2018 IPR025931 TaqI-like C-terminal specificity domain Trad_1009 69a2ecf8b0b711b592cb72f29f7b725e 564 Gene3D G3DSA:3.40.50.150 30 275 3.2E-38 T 15-10-2018 Trad_1009 69a2ecf8b0b711b592cb72f29f7b725e 564 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 57 71 1.2E-15 T 15-10-2018 Trad_1009 69a2ecf8b0b711b592cb72f29f7b725e 564 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 149 161 1.2E-15 T 15-10-2018 Trad_1009 69a2ecf8b0b711b592cb72f29f7b725e 564 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 184 208 1.2E-15 T 15-10-2018 Trad_1009 69a2ecf8b0b711b592cb72f29f7b725e 564 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 28 44 1.2E-15 T 15-10-2018 Trad_0949 2d599b343ced43d8479cdc44f33b62c5 406 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 220 396 2.2E-22 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Trad_0949 2d599b343ced43d8479cdc44f33b62c5 406 Gene3D G3DSA:1.10.3720.10 133 393 9.6E-59 T 15-10-2018 IPR035906 MetI-like superfamily Trad_0949 2d599b343ced43d8479cdc44f33b62c5 406 SUPERFAMILY SSF161098 134 406 2.35E-67 T 15-10-2018 IPR035906 MetI-like superfamily Trad_1003 13ac734db703abd25ee63a650bdc928f 241 Pfam PF00106 short chain dehydrogenase 10 197 2.3E-44 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_1003 13ac734db703abd25ee63a650bdc928f 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 3.9E-21 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_1003 13ac734db703abd25ee63a650bdc928f 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 3.9E-21 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_1003 13ac734db703abd25ee63a650bdc928f 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 3.9E-21 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_1003 13ac734db703abd25ee63a650bdc928f 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 3.9E-21 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_1003 13ac734db703abd25ee63a650bdc928f 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 3.9E-21 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_1003 13ac734db703abd25ee63a650bdc928f 241 Gene3D G3DSA:3.40.50.720 4 233 1.1E-61 T 15-10-2018 Trad_1003 13ac734db703abd25ee63a650bdc928f 241 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 15-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Trad_1003 13ac734db703abd25ee63a650bdc928f 241 SUPERFAMILY SSF51735 6 227 5.64E-59 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_1363 e43954f7f0585f54ac7f7d7b6651b863 815 Gene3D G3DSA:1.10.10.10 617 707 3.2E-8 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Trad_1363 e43954f7f0585f54ac7f7d7b6651b863 815 Gene3D G3DSA:1.25.40.10 315 602 4.1E-11 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Trad_1363 e43954f7f0585f54ac7f7d7b6651b863 815 SMART SM00862 639 704 6.1E-5 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Trad_0724 12368417a2d0d5379efd470537a84280 163 Gene3D G3DSA:1.20.1260.10 1 163 3.3E-62 T 15-10-2018 IPR012347 Ferritin-like Trad_0724 12368417a2d0d5379efd470537a84280 163 SUPERFAMILY SSF47240 3 160 1.07E-52 T 15-10-2018 IPR009078 Ferritin-like superfamily Trad_0724 12368417a2d0d5379efd470537a84280 163 Pfam PF05974 Domain of unknown function (DUF892) 5 163 1.3E-54 T 15-10-2018 IPR010287 Domain of unknown function DUF892 Trad_0165 06495cfaff90b2d030320b4cec08b9a2 510 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 5 510 47.749 T 15-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Trad_0165 06495cfaff90b2d030320b4cec08b9a2 510 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 6 509 3.0E-200 T 15-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Trad_0165 06495cfaff90b2d030320b4cec08b9a2 510 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 83 299 2.5E-77 T 15-10-2018 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Trad_0165 06495cfaff90b2d030320b4cec08b9a2 510 PIRSF PIRSF001492 1 510 8.8E-196 T 15-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Trad_0165 06495cfaff90b2d030320b4cec08b9a2 510 Pfam PF01676 Metalloenzyme superfamily 6 499 1.0E-75 T 15-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 Trad_0165 06495cfaff90b2d030320b4cec08b9a2 510 Gene3D G3DSA:3.40.720.10 6 509 5.6E-215 T 15-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 Trad_0165 06495cfaff90b2d030320b4cec08b9a2 510 SUPERFAMILY SSF53649 5 509 1.22E-75 T 15-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 Trad_0165 06495cfaff90b2d030320b4cec08b9a2 510 Gene3D G3DSA:3.40.1450.10 78 311 5.6E-215 T 15-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Trad_0165 06495cfaff90b2d030320b4cec08b9a2 510 SUPERFAMILY SSF64158 78 306 4.18E-74 T 15-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Trad_2146 424500918a87ae14ceb7f8792ca358a3 476 Pfam PF00158 Sigma-54 interaction domain 168 227 1.0E-4 T 15-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Trad_2146 424500918a87ae14ceb7f8792ca358a3 476 SUPERFAMILY SSF52540 41 372 4.26E-18 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_2146 424500918a87ae14ceb7f8792ca358a3 476 Gene3D G3DSA:3.40.50.300 39 250 2.2E-28 T 15-10-2018 Trad_1776 7432d3d695acdd03ff05fbc8b96cb9a5 350 SMART SM00235 157 301 2.5E-16 T 15-10-2018 IPR006026 Peptidase, metallopeptidase GO:0006508|GO:0008237|GO:0008270 Trad_1776 7432d3d695acdd03ff05fbc8b96cb9a5 350 SUPERFAMILY SSF55486 164 349 4.97E-31 T 15-10-2018 Trad_1776 7432d3d695acdd03ff05fbc8b96cb9a5 350 Gene3D G3DSA:3.40.390.10 86 350 5.1E-45 T 15-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 Trad_1776 7432d3d695acdd03ff05fbc8b96cb9a5 350 Pfam PF01400 Astacin (Peptidase family M12A) 179 349 2.9E-35 T 15-10-2018 IPR001506 Peptidase M12A GO:0004222|GO:0006508 Trad_1776 7432d3d695acdd03ff05fbc8b96cb9a5 350 PRINTS PR00480 Astacin family signature 337 350 1.2E-17 T 15-10-2018 IPR001506 Peptidase M12A GO:0004222|GO:0006508 Trad_1776 7432d3d695acdd03ff05fbc8b96cb9a5 350 PRINTS PR00480 Astacin family signature 260 277 1.2E-17 T 15-10-2018 IPR001506 Peptidase M12A GO:0004222|GO:0006508 Trad_1776 7432d3d695acdd03ff05fbc8b96cb9a5 350 PRINTS PR00480 Astacin family signature 296 311 1.2E-17 T 15-10-2018 IPR001506 Peptidase M12A GO:0004222|GO:0006508 Trad_1776 7432d3d695acdd03ff05fbc8b96cb9a5 350 PRINTS PR00480 Astacin family signature 241 259 1.2E-17 T 15-10-2018 IPR001506 Peptidase M12A GO:0004222|GO:0006508 Trad_1524 3eb914cbc63a7778ff9badb9725d7a8a 779 SMART SM00052 505 767 1.6E-89 T 15-10-2018 IPR001633 EAL domain Trad_1524 3eb914cbc63a7778ff9badb9725d7a8a 779 SUPERFAMILY SSF141868 512 768 1.44E-70 T 15-10-2018 IPR035919 EAL domain superfamily Trad_1524 3eb914cbc63a7778ff9badb9725d7a8a 779 Gene3D G3DSA:3.30.70.270 333 507 2.6E-59 T 15-10-2018 Trad_1524 3eb914cbc63a7778ff9badb9725d7a8a 779 Pfam PF00990 Diguanylate cyclase, GGDEF domain 335 489 3.3E-48 T 15-10-2018 IPR000160 GGDEF domain Trad_1524 3eb914cbc63a7778ff9badb9725d7a8a 779 SUPERFAMILY SSF55073 340 496 1.02E-47 T 15-10-2018 IPR029787 Nucleotide cyclase Trad_1524 3eb914cbc63a7778ff9badb9725d7a8a 779 SUPERFAMILY SSF55781 188 335 8.29E-17 T 15-10-2018 Trad_1524 3eb914cbc63a7778ff9badb9725d7a8a 779 Pfam PF00563 EAL domain 512 762 2.2E-60 T 15-10-2018 IPR001633 EAL domain Trad_1524 3eb914cbc63a7778ff9badb9725d7a8a 779 Gene3D G3DSA:3.20.20.450 508 773 1.9E-85 T 15-10-2018 IPR035919 EAL domain superfamily Trad_1524 3eb914cbc63a7778ff9badb9725d7a8a 779 Gene3D G3DSA:3.30.450.40 11 158 2.2E-9 T 15-10-2018 IPR029016 GAF-like domain superfamily Trad_1524 3eb914cbc63a7778ff9badb9725d7a8a 779 Gene3D G3DSA:3.30.450.40 184 332 9.7E-17 T 15-10-2018 IPR029016 GAF-like domain superfamily Trad_1524 3eb914cbc63a7778ff9badb9725d7a8a 779 Pfam PF13185 GAF domain 222 322 3.5E-8 T 15-10-2018 IPR003018 GAF domain GO:0005515 Trad_1524 3eb914cbc63a7778ff9badb9725d7a8a 779 SMART SM00267 324 495 2.4E-64 T 15-10-2018 IPR000160 GGDEF domain Trad_1524 3eb914cbc63a7778ff9badb9725d7a8a 779 SMART SM00065 166 332 1.6E-4 T 15-10-2018 IPR003018 GAF domain GO:0005515 Trad_1524 3eb914cbc63a7778ff9badb9725d7a8a 779 SMART SM00065 25 165 0.087 T 15-10-2018 IPR003018 GAF domain GO:0005515 Trad_1524 3eb914cbc63a7778ff9badb9725d7a8a 779 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 331 490 6.2E-45 T 15-10-2018 IPR000160 GGDEF domain Trad_1524 3eb914cbc63a7778ff9badb9725d7a8a 779 SUPERFAMILY SSF55781 33 157 2.84E-13 T 15-10-2018 Trad_0105 f96cffaac5202c24208dfbaa66da1f11 399 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 5 209 1.2E-56 T 15-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain Trad_0105 f96cffaac5202c24208dfbaa66da1f11 399 SMART SM00833 256 372 1.6E-47 T 15-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal Trad_0105 f96cffaac5202c24208dfbaa66da1f11 399 Gene3D G3DSA:3.40.50.300 2 229 2.4E-71 T 15-10-2018 Trad_0105 f96cffaac5202c24208dfbaa66da1f11 399 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 256 369 6.2E-27 T 15-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal Trad_0105 f96cffaac5202c24208dfbaa66da1f11 399 SUPERFAMILY SSF52540 4 314 1.06E-42 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_1668 b49076f962f06f229ef971eaff0164c0 354 TIGRFAM TIGR01898 cas_TM1791_cmr6: CRISPR type III-B/RAMP module RAMP protein Cmr6 146 255 1.4E-22 T 15-10-2018 IPR010172 CRISPR-associated protein, TM1791 Trad_1668 b49076f962f06f229ef971eaff0164c0 354 Pfam PF03787 RAMP superfamily 93 254 6.5E-11 T 15-10-2018 IPR005537 CRISPR type III-associated RAMP protein Trad_2420 b4bad88270140a58419eea65fd776b7b 528 Gene3D G3DSA:3.60.20.40 351 528 5.0E-68 T 15-10-2018 Trad_2420 b4bad88270140a58419eea65fd776b7b 528 SUPERFAMILY SSF56235 6 528 4.63E-175 T 15-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Trad_2420 b4bad88270140a58419eea65fd776b7b 528 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 347 365 2.3E-38 T 15-10-2018 Trad_2420 b4bad88270140a58419eea65fd776b7b 528 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 41 66 2.3E-38 T 15-10-2018 Trad_2420 b4bad88270140a58419eea65fd776b7b 528 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 253 272 2.3E-38 T 15-10-2018 Trad_2420 b4bad88270140a58419eea65fd776b7b 528 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 426 443 2.3E-38 T 15-10-2018 Trad_2420 b4bad88270140a58419eea65fd776b7b 528 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 126 145 2.3E-38 T 15-10-2018 Trad_2420 b4bad88270140a58419eea65fd776b7b 528 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 371 389 2.3E-38 T 15-10-2018 Trad_2420 b4bad88270140a58419eea65fd776b7b 528 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 402 417 2.3E-38 T 15-10-2018 Trad_2420 b4bad88270140a58419eea65fd776b7b 528 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 108 126 2.3E-38 T 15-10-2018 Trad_2420 b4bad88270140a58419eea65fd776b7b 528 Gene3D G3DSA:1.10.246.130 241 350 2.0E-29 T 15-10-2018 Trad_2420 b4bad88270140a58419eea65fd776b7b 528 Pfam PF01019 Gamma-glutamyltranspeptidase 34 523 4.2E-156 T 15-10-2018 Trad_1373 83d1138a91d1b8ced8fd0de45edbea03 642 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 34 175 4.9E-16 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Trad_1373 83d1138a91d1b8ced8fd0de45edbea03 642 SUPERFAMILY SSF55874 5 213 1.09E-61 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Trad_1373 83d1138a91d1b8ced8fd0de45edbea03 642 ProSitePatterns PS00177 DNA topoisomerase II signature. 425 433 - T 15-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Trad_1373 83d1138a91d1b8ced8fd0de45edbea03 642 Pfam PF01751 Toprim domain 422 527 2.8E-16 T 15-10-2018 IPR006171 TOPRIM domain Trad_1373 83d1138a91d1b8ced8fd0de45edbea03 642 SMART SM00433 35 636 4.7E-286 T 15-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Trad_1373 83d1138a91d1b8ced8fd0de45edbea03 642 Gene3D G3DSA:3.30.565.10 2 223 6.1E-78 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Trad_1373 83d1138a91d1b8ced8fd0de45edbea03 642 PRINTS PR01159 DNA gyrase subunit B signature 245 263 2.8E-54 T 15-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Trad_1373 83d1138a91d1b8ced8fd0de45edbea03 642 PRINTS PR01159 DNA gyrase subunit B signature 183 198 2.8E-54 T 15-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Trad_1373 83d1138a91d1b8ced8fd0de45edbea03 642 PRINTS PR01159 DNA gyrase subunit B signature 612 628 2.8E-54 T 15-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Trad_1373 83d1138a91d1b8ced8fd0de45edbea03 642 PRINTS PR01159 DNA gyrase subunit B signature 377 397 2.8E-54 T 15-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Trad_1373 83d1138a91d1b8ced8fd0de45edbea03 642 PRINTS PR01159 DNA gyrase subunit B signature 473 482 2.8E-54 T 15-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Trad_1373 83d1138a91d1b8ced8fd0de45edbea03 642 PRINTS PR01159 DNA gyrase subunit B signature 596 608 2.8E-54 T 15-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Trad_1373 83d1138a91d1b8ced8fd0de45edbea03 642 PRINTS PR01159 DNA gyrase subunit B signature 198 211 2.8E-54 T 15-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Trad_1373 83d1138a91d1b8ced8fd0de45edbea03 642 PRINTS PR01159 DNA gyrase subunit B signature 315 331 2.8E-54 T 15-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Trad_1373 83d1138a91d1b8ced8fd0de45edbea03 642 PRINTS PR01159 DNA gyrase subunit B signature 5 15 2.8E-54 T 15-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Trad_1373 83d1138a91d1b8ced8fd0de45edbea03 642 PRINTS PR01159 DNA gyrase subunit B signature 363 377 2.8E-54 T 15-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Trad_1373 83d1138a91d1b8ced8fd0de45edbea03 642 PRINTS PR00418 DNA topoisomerase II family signature 70 83 2.5E-62 T 15-10-2018 Trad_1373 83d1138a91d1b8ced8fd0de45edbea03 642 PRINTS PR00418 DNA topoisomerase II family signature 532 544 2.5E-62 T 15-10-2018 Trad_1373 83d1138a91d1b8ced8fd0de45edbea03 642 PRINTS PR00418 DNA topoisomerase II family signature 113 127 2.5E-62 T 15-10-2018 Trad_1373 83d1138a91d1b8ced8fd0de45edbea03 642 PRINTS PR00418 DNA topoisomerase II family signature 512 529 2.5E-62 T 15-10-2018 Trad_1373 83d1138a91d1b8ced8fd0de45edbea03 642 PRINTS PR00418 DNA topoisomerase II family signature 35 50 2.5E-62 T 15-10-2018 Trad_1373 83d1138a91d1b8ced8fd0de45edbea03 642 PRINTS PR00418 DNA topoisomerase II family signature 271 284 2.5E-62 T 15-10-2018 Trad_1373 83d1138a91d1b8ced8fd0de45edbea03 642 PRINTS PR00418 DNA topoisomerase II family signature 423 437 2.5E-62 T 15-10-2018 Trad_1373 83d1138a91d1b8ced8fd0de45edbea03 642 PRINTS PR00418 DNA topoisomerase II family signature 494 510 2.5E-62 T 15-10-2018 Trad_1373 83d1138a91d1b8ced8fd0de45edbea03 642 PRINTS PR00418 DNA topoisomerase II family signature 575 591 2.5E-62 T 15-10-2018 Trad_1373 83d1138a91d1b8ced8fd0de45edbea03 642 Pfam PF00204 DNA gyrase B 225 393 4.4E-51 T 15-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Trad_1373 83d1138a91d1b8ced8fd0de45edbea03 642 Gene3D G3DSA:3.30.230.10 224 400 1.9E-58 T 15-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Trad_1373 83d1138a91d1b8ced8fd0de45edbea03 642 SUPERFAMILY SSF56719 399 634 1.23E-81 T 15-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 Trad_1373 83d1138a91d1b8ced8fd0de45edbea03 642 Gene3D G3DSA:3.40.50.670 401 642 1.1E-98 T 15-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Trad_1373 83d1138a91d1b8ced8fd0de45edbea03 642 SMART SM00387 31 177 4.8E-17 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Trad_1373 83d1138a91d1b8ced8fd0de45edbea03 642 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 571 632 1.8E-27 T 15-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Trad_1373 83d1138a91d1b8ced8fd0de45edbea03 642 SUPERFAMILY SSF54211 232 394 3.6E-46 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Trad_0057 26105f15be50a1ced448c6041f4a1958 401 Gene3D G3DSA:1.20.140.10 250 401 1.3E-35 T 15-10-2018 Trad_0057 26105f15be50a1ced448c6041f4a1958 401 Gene3D G3DSA:1.10.540.10 6 142 2.7E-39 T 15-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 Trad_0057 26105f15be50a1ced448c6041f4a1958 401 SUPERFAMILY SSF56645 18 248 3.53E-68 T 15-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 Trad_0057 26105f15be50a1ced448c6041f4a1958 401 SUPERFAMILY SSF47203 248 397 1.47E-36 T 15-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 Trad_0057 26105f15be50a1ced448c6041f4a1958 401 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 145 236 2.0E-18 T 15-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 Trad_0057 26105f15be50a1ced448c6041f4a1958 401 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 29 141 4.1E-32 T 15-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 Trad_0057 26105f15be50a1ced448c6041f4a1958 401 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 354 373 - T 15-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 Trad_0057 26105f15be50a1ced448c6041f4a1958 401 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 248 395 7.7E-29 T 15-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 Trad_0057 26105f15be50a1ced448c6041f4a1958 401 Gene3D G3DSA:2.40.110.10 144 248 3.4E-30 T 15-10-2018 Trad_0591 ec56656c0bbee89d9d221d697a12ca37 431 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 7 416 1.9E-138 T 15-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Trad_0591 ec56656c0bbee89d9d221d697a12ca37 431 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 11 409 7.4E-71 T 15-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 Trad_0591 ec56656c0bbee89d9d221d697a12ca37 431 Gene3D G3DSA:3.65.10.10 25 233 1.7E-135 T 15-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 Trad_0591 ec56656c0bbee89d9d221d697a12ca37 431 SUPERFAMILY SSF55205 7 417 3.11E-106 T 15-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 Trad_0591 ec56656c0bbee89d9d221d697a12ca37 431 Gene3D G3DSA:3.65.10.10 10 416 1.7E-135 T 15-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 Trad_0591 ec56656c0bbee89d9d221d697a12ca37 431 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 5 419 36.735 T 15-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Trad_1168 b2ca42efe9b4c026632a168828ee9123 230 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Trad_1168 b2ca42efe9b4c026632a168828ee9123 230 Gene3D G3DSA:3.40.50.300 3 230 2.0E-69 T 15-10-2018 Trad_1168 b2ca42efe9b4c026632a168828ee9123 230 SMART SM00382 33 221 1.9E-14 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_1168 b2ca42efe9b4c026632a168828ee9123 230 SUPERFAMILY SSF52540 4 225 5.32E-67 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_1168 b2ca42efe9b4c026632a168828ee9123 230 Pfam PF00005 ABC transporter 24 173 6.8E-29 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Trad_2015 1839751d502ee68ea3c60a35b7dc783a 339 Gene3D G3DSA:3.40.190.10 121 226 1.4E-52 T 15-10-2018 Trad_2015 1839751d502ee68ea3c60a35b7dc783a 339 SUPERFAMILY SSF53850 26 255 2.35E-48 T 15-10-2018 Trad_2015 1839751d502ee68ea3c60a35b7dc783a 339 SMART SM00062 34 263 5.0E-51 T 15-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Trad_2015 1839751d502ee68ea3c60a35b7dc783a 339 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 57 70 - T 15-10-2018 IPR018313 Solute-binding protein family 3, conserved site Trad_2015 1839751d502ee68ea3c60a35b7dc783a 339 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 35 253 3.3E-35 T 15-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Trad_2015 1839751d502ee68ea3c60a35b7dc783a 339 Gene3D G3DSA:3.40.190.10 29 243 1.4E-52 T 15-10-2018 Trad_0679 6a3c3bec86c96e5e1fc6b8a39ad6935b 220 Pfam PF00027 Cyclic nucleotide-binding domain 23 99 1.2E-12 T 15-10-2018 IPR000595 Cyclic nucleotide-binding domain Trad_0679 6a3c3bec86c96e5e1fc6b8a39ad6935b 220 Gene3D G3DSA:1.10.10.10 128 212 2.4E-18 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Trad_0679 6a3c3bec86c96e5e1fc6b8a39ad6935b 220 SMART SM00419 157 205 2.0E-8 T 15-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Trad_0679 6a3c3bec86c96e5e1fc6b8a39ad6935b 220 SUPERFAMILY SSF46785 134 208 9.09E-14 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Trad_0679 6a3c3bec86c96e5e1fc6b8a39ad6935b 220 SMART SM00100 2 121 7.3E-7 T 15-10-2018 IPR000595 Cyclic nucleotide-binding domain Trad_0679 6a3c3bec86c96e5e1fc6b8a39ad6935b 220 Pfam PF13545 Crp-like helix-turn-helix domain 136 210 2.1E-15 T 15-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Trad_0679 6a3c3bec86c96e5e1fc6b8a39ad6935b 220 SUPERFAMILY SSF51206 23 124 1.96E-16 T 15-10-2018 IPR018490 Cyclic nucleotide-binding-like Trad_0679 6a3c3bec86c96e5e1fc6b8a39ad6935b 220 Gene3D G3DSA:2.60.120.10 18 127 1.1E-18 T 15-10-2018 IPR014710 RmlC-like jelly roll fold Trad_0881 356f7a8ac5b0ac206970367b15fcbf5c 223 Pfam PF00072 Response regulator receiver domain 5 114 2.4E-22 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Trad_0881 356f7a8ac5b0ac206970367b15fcbf5c 223 Gene3D G3DSA:1.10.10.10 124 221 1.1E-31 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Trad_0881 356f7a8ac5b0ac206970367b15fcbf5c 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 216 8.4E-26 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Trad_0881 356f7a8ac5b0ac206970367b15fcbf5c 223 SUPERFAMILY SSF52172 2 125 1.99E-37 T 15-10-2018 IPR011006 CheY-like superfamily Trad_0881 356f7a8ac5b0ac206970367b15fcbf5c 223 SUPERFAMILY SSF46894 122 217 3.4E-27 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Trad_0881 356f7a8ac5b0ac206970367b15fcbf5c 223 Gene3D G3DSA:3.40.50.2300 1 123 2.0E-33 T 15-10-2018 Trad_0881 356f7a8ac5b0ac206970367b15fcbf5c 223 SMART SM00862 145 216 2.5E-27 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Trad_0881 356f7a8ac5b0ac206970367b15fcbf5c 223 SMART SM00448 3 114 2.3E-41 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Trad_2713 260e77bc6cb193164e6ab64cd0e7b3de 147 Pfam PF01850 PIN domain 2 129 6.9E-12 T 15-10-2018 IPR002716 PIN domain Trad_2713 260e77bc6cb193164e6ab64cd0e7b3de 147 Gene3D G3DSA:3.40.50.1010 1 133 5.5E-13 T 15-10-2018 Trad_2713 260e77bc6cb193164e6ab64cd0e7b3de 147 SUPERFAMILY SSF88723 2 137 1.51E-16 T 15-10-2018 IPR029060 PIN-like domain superfamily Trad_2670 e228e02184b3dc6c455ac0ce2c0221bf 157 SUPERFAMILY SSF54768 3 70 3.46E-17 T 15-10-2018 Trad_2670 e228e02184b3dc6c455ac0ce2c0221bf 157 Gene3D G3DSA:3.30.160.20 5 71 1.8E-15 T 15-10-2018 Trad_2670 e228e02184b3dc6c455ac0ce2c0221bf 157 SMART SM00358 4 70 6.1E-13 T 15-10-2018 IPR014720 Double-stranded RNA-binding domain Trad_2670 e228e02184b3dc6c455ac0ce2c0221bf 157 Pfam PF00035 Double-stranded RNA binding motif 4 69 2.3E-10 T 15-10-2018 IPR014720 Double-stranded RNA-binding domain Trad_2697 9c5a46b636cfabcd237b9f292c40d714 925 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 52 63 - T 15-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Trad_2697 9c5a46b636cfabcd237b9f292c40d714 925 SUPERFAMILY SSF46589 856 920 5.23E-13 T 15-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 Trad_2697 9c5a46b636cfabcd237b9f292c40d714 925 SUPERFAMILY SSF50677 200 349 1.83E-53 T 15-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Trad_2697 9c5a46b636cfabcd237b9f292c40d714 925 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 856 920 2.3E-16 T 15-10-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 Trad_2697 9c5a46b636cfabcd237b9f292c40d714 925 SUPERFAMILY SSF47323 588 870 1.87E-48 T 15-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Trad_2697 9c5a46b636cfabcd237b9f292c40d714 925 Gene3D G3DSA:1.10.730.10 12 713 3.1E-279 T 15-10-2018 Trad_2697 9c5a46b636cfabcd237b9f292c40d714 925 SUPERFAMILY SSF52374 11 586 1.49E-133 T 15-10-2018 Trad_2697 9c5a46b636cfabcd237b9f292c40d714 925 PRINTS PR00986 Valyl-tRNA synthetase signature 457 478 5.8E-36 T 15-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Trad_2697 9c5a46b636cfabcd237b9f292c40d714 925 PRINTS PR00986 Valyl-tRNA synthetase signature 489 507 5.8E-36 T 15-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Trad_2697 9c5a46b636cfabcd237b9f292c40d714 925 PRINTS PR00986 Valyl-tRNA synthetase signature 355 368 5.8E-36 T 15-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Trad_2697 9c5a46b636cfabcd237b9f292c40d714 925 PRINTS PR00986 Valyl-tRNA synthetase signature 45 56 5.8E-36 T 15-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Trad_2697 9c5a46b636cfabcd237b9f292c40d714 925 PRINTS PR00986 Valyl-tRNA synthetase signature 238 255 5.8E-36 T 15-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Trad_2697 9c5a46b636cfabcd237b9f292c40d714 925 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 37 577 4.2E-178 T 15-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Trad_2697 9c5a46b636cfabcd237b9f292c40d714 925 Gene3D G3DSA:3.40.50.620 32 538 3.1E-279 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Trad_2697 9c5a46b636cfabcd237b9f292c40d714 925 Hamap MF_02004 Valine--tRNA ligase [valS]. 12 921 14.685 T 15-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Trad_2697 9c5a46b636cfabcd237b9f292c40d714 925 Gene3D G3DSA:1.10.287.380 849 921 3.6E-22 T 15-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 Trad_2697 9c5a46b636cfabcd237b9f292c40d714 925 TIGRFAM TIGR00422 valS: valine--tRNA ligase 13 712 4.3E-276 T 15-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Trad_2697 9c5a46b636cfabcd237b9f292c40d714 925 Gene3D G3DSA:3.90.740.10 184 351 3.1E-279 T 15-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Trad_2697 9c5a46b636cfabcd237b9f292c40d714 925 Pfam PF08264 Anticodon-binding domain of tRNA 623 804 2.2E-34 T 15-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 Trad_1101 f073d81cc0ccd42be31635cd44f8015d 266 Gene3D G3DSA:3.40.50.150 68 262 3.3E-68 T 15-10-2018 Trad_1101 f073d81cc0ccd42be31635cd44f8015d 266 Hamap MF_01523 Ribosomal RNA small subunit methyltransferase J [rsmJ]. 10 260 35.935 T 15-10-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 Trad_1101 f073d81cc0ccd42be31635cd44f8015d 266 SUPERFAMILY SSF53335 17 259 7.47E-62 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Trad_1101 f073d81cc0ccd42be31635cd44f8015d 266 Pfam PF04445 Putative SAM-dependent methyltransferase 38 258 1.1E-81 T 15-10-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 Trad_1596 577acd1d3d0581d1441007e1f04496db 681 SUPERFAMILY SSF47781 410 585 2.19E-56 T 15-10-2018 IPR010994 RuvA domain 2-like Trad_1596 577acd1d3d0581d1441007e1f04496db 681 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 14 662 7.9E-232 T 15-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 Trad_1596 577acd1d3d0581d1441007e1f04496db 681 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 9 325 2.0E-118 T 15-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 Trad_1596 577acd1d3d0581d1441007e1f04496db 681 SMART SM00532 6 452 3.2E-239 T 15-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 Trad_1596 577acd1d3d0581d1441007e1f04496db 681 SUPERFAMILY SSF52113 593 669 2.8E-19 T 15-10-2018 IPR036420 BRCT domain superfamily Trad_1596 577acd1d3d0581d1441007e1f04496db 681 Gene3D G3DSA:3.40.50.10190 593 671 4.3E-25 T 15-10-2018 IPR036420 BRCT domain superfamily Trad_1596 577acd1d3d0581d1441007e1f04496db 681 SUPERFAMILY SSF50249 325 406 1.71E-23 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold Trad_1596 577acd1d3d0581d1441007e1f04496db 681 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 594 666 4.8E-12 T 15-10-2018 IPR001357 BRCT domain Trad_1596 577acd1d3d0581d1441007e1f04496db 681 PIRSF PIRSF001604 2 671 2.2E-228 T 15-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 Trad_1596 577acd1d3d0581d1441007e1f04496db 681 Gene3D G3DSA:1.10.150.20 436 508 8.5E-26 T 15-10-2018 Trad_1596 577acd1d3d0581d1441007e1f04496db 681 Gene3D G3DSA:2.40.50.140 326 398 1.8E-25 T 15-10-2018 Trad_1596 577acd1d3d0581d1441007e1f04496db 681 SMART SM00278 484 503 5.0 T 15-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Trad_1596 577acd1d3d0581d1441007e1f04496db 681 SMART SM00278 450 469 980.0 T 15-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Trad_1596 577acd1d3d0581d1441007e1f04496db 681 SMART SM00278 516 535 400.0 T 15-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Trad_1596 577acd1d3d0581d1441007e1f04496db 681 SMART SM00278 548 567 4.4 T 15-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Trad_1596 577acd1d3d0581d1441007e1f04496db 681 Gene3D G3DSA:1.10.150.20 509 587 9.8E-23 T 15-10-2018 Trad_1596 577acd1d3d0581d1441007e1f04496db 681 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 328 404 9.8E-29 T 15-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 Trad_1596 577acd1d3d0581d1441007e1f04496db 681 Pfam PF14520 Helix-hairpin-helix domain 453 504 3.3E-7 T 15-10-2018 Trad_1596 577acd1d3d0581d1441007e1f04496db 681 Gene3D G3DSA:2.20.70.80 399 434 3.8E-5 T 15-10-2018 Trad_1596 577acd1d3d0581d1441007e1f04496db 681 Hamap MF_01588 DNA ligase [ligA]. 5 667 49.047 T 15-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 Trad_1596 577acd1d3d0581d1441007e1f04496db 681 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 118 147 - T 15-10-2018 IPR018239 NAD-dependent DNA ligase, active site Trad_1596 577acd1d3d0581d1441007e1f04496db 681 SMART SM00292 594 670 1.2E-15 T 15-10-2018 IPR001357 BRCT domain Trad_1596 577acd1d3d0581d1441007e1f04496db 681 SUPERFAMILY SSF56091 6 323 3.7E-107 T 15-10-2018 Trad_1596 577acd1d3d0581d1441007e1f04496db 681 Pfam PF12826 Helix-hairpin-helix motif 514 577 4.7E-19 T 15-10-2018 Trad_1596 577acd1d3d0581d1441007e1f04496db 681 Gene3D G3DSA:1.10.287.610 4 71 6.6E-27 T 15-10-2018 Trad_1596 577acd1d3d0581d1441007e1f04496db 681 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 414 438 3.7E-6 T 15-10-2018 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 Trad_1596 577acd1d3d0581d1441007e1f04496db 681 Gene3D G3DSA:3.30.470.90 72 325 2.8E-89 T 15-10-2018 Trad_2732 f76714669f9583501dfa438f1285d8c1 419 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 7 418 49.496 T 15-10-2018 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 Trad_2732 f76714669f9583501dfa438f1285d8c1 419 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 106 114 - T 15-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 Trad_2732 f76714669f9583501dfa438f1285d8c1 419 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 204 214 - T 15-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 Trad_2732 f76714669f9583501dfa438f1285d8c1 419 SUPERFAMILY SSF53448 5 387 1.1E-74 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Trad_2732 f76714669f9583501dfa438f1285d8c1 419 Gene3D G3DSA:3.90.550.10 2 294 1.3E-83 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Trad_2732 f76714669f9583501dfa438f1285d8c1 419 Pfam PF00483 Nucleotidyl transferase 12 284 6.0E-65 T 15-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Trad_2732 f76714669f9583501dfa438f1285d8c1 419 Gene3D G3DSA:2.160.10.10 295 417 1.3E-37 T 15-10-2018 Trad_2732 f76714669f9583501dfa438f1285d8c1 419 SUPERFAMILY SSF51161 305 416 4.12E-20 T 15-10-2018 IPR011004 Trimeric LpxA-like superfamily Trad_2732 f76714669f9583501dfa438f1285d8c1 419 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 16 35 - T 15-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 Trad_2732 f76714669f9583501dfa438f1285d8c1 419 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 10 391 6.4E-149 T 15-10-2018 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 Trad_0387 0626221a6eb9791ba8e1734cf9b25fcd 380 Pfam PF06969 HemN C-terminal domain 302 359 1.9E-12 T 15-10-2018 IPR010723 HemN, C-terminal Trad_0387 0626221a6eb9791ba8e1734cf9b25fcd 380 Pfam PF04055 Radical SAM superfamily 11 169 1.6E-18 T 15-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Trad_0387 0626221a6eb9791ba8e1734cf9b25fcd 380 SMART SM00729 5 216 3.1E-40 T 15-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Trad_0387 0626221a6eb9791ba8e1734cf9b25fcd 380 Gene3D G3DSA:3.80.30.20 2 269 3.8E-74 T 15-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Trad_0387 0626221a6eb9791ba8e1734cf9b25fcd 380 SUPERFAMILY SSF102114 3 370 3.27E-83 T 15-10-2018 Trad_1661 5a9343508f958f5ec7930f26f80997ab 620 TIGRFAM TIGR01863 cas_Csd1: CRISPR-associated protein Cas8c/Csd1, subtype I-C/DVULG 13 584 6.1E-112 T 15-10-2018 IPR010144 CRISPR-associated protein, Csd1-type Trad_1661 5a9343508f958f5ec7930f26f80997ab 620 Pfam PF09709 CRISPR-associated protein (Cas_Csd1) 19 583 3.7E-113 T 15-10-2018 IPR010144 CRISPR-associated protein, Csd1-type Trad_0085 484b3786c8e9a6d166157273f52820db 111 Gene3D G3DSA:2.30.30.110 17 109 4.3E-9 T 15-10-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor Trad_0085 484b3786c8e9a6d166157273f52820db 111 SUPERFAMILY SSF50118 7 107 1.68E-9 T 15-10-2018 Trad_0085 484b3786c8e9a6d166157273f52820db 111 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 9 105 3.7E-7 T 15-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 Trad_0424 7c1fbbd4d6df9946563d3731a140d16a 114 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 5 54 8.0E-10 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Trad_0424 7c1fbbd4d6df9946563d3731a140d16a 114 Gene3D G3DSA:1.10.260.40 4 110 1.9E-7 T 15-10-2018 Trad_0424 7c1fbbd4d6df9946563d3731a140d16a 114 SMART SM00530 4 60 8.0E-5 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Trad_0424 7c1fbbd4d6df9946563d3731a140d16a 114 SUPERFAMILY SSF47413 3 54 2.96E-9 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Trad_1178 a223ef2ef7c0a72ebf29a09024bbcd5b 417 Pfam PF02321 Outer membrane efflux protein 2 186 7.5E-16 T 15-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Trad_1178 a223ef2ef7c0a72ebf29a09024bbcd5b 417 Pfam PF02321 Outer membrane efflux protein 218 399 3.7E-6 T 15-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Trad_1178 a223ef2ef7c0a72ebf29a09024bbcd5b 417 SUPERFAMILY SSF56954 1 400 9.81E-32 T 15-10-2018 Trad_1178 a223ef2ef7c0a72ebf29a09024bbcd5b 417 Gene3D G3DSA:1.20.1600.10 1 402 9.7E-37 T 15-10-2018 Trad_0704 e761b7753607763b698760c176fb0234 508 Pfam PF00355 Rieske [2Fe-2S] domain 441 505 8.5E-12 T 15-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 Trad_0704 e761b7753607763b698760c176fb0234 508 Pfam PF01266 FAD dependent oxidoreductase 35 382 9.0E-50 T 15-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 Trad_0704 e761b7753607763b698760c176fb0234 508 Gene3D G3DSA:2.102.10.10 423 507 2.8E-23 T 15-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 Trad_0704 e761b7753607763b698760c176fb0234 508 Gene3D G3DSA:3.30.9.10 128 343 2.9E-57 T 15-10-2018 Trad_0704 e761b7753607763b698760c176fb0234 508 PRINTS PR00162 Rieske 2Fe-2S subunit signature 481 493 9.3E-8 T 15-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 Trad_0704 e761b7753607763b698760c176fb0234 508 PRINTS PR00162 Rieske 2Fe-2S subunit signature 460 471 9.3E-8 T 15-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 Trad_0704 e761b7753607763b698760c176fb0234 508 PRINTS PR00162 Rieske 2Fe-2S subunit signature 493 505 9.3E-8 T 15-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 Trad_0704 e761b7753607763b698760c176fb0234 508 SUPERFAMILY SSF51905 34 394 3.24E-38 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Trad_0704 e761b7753607763b698760c176fb0234 508 SUPERFAMILY SSF50022 427 506 5.24E-23 T 15-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 Trad_0704 e761b7753607763b698760c176fb0234 508 Gene3D G3DSA:3.50.50.60 35 384 2.9E-57 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Trad_0507 71adf89ef2a5dd772bf701ddb4bb570f 588 Gene3D G3DSA:3.30.470.10 364 443 7.6E-17 T 15-10-2018 Trad_0507 71adf89ef2a5dd772bf701ddb4bb570f 588 Pfam PF00425 chorismate binding enzyme 104 362 1.2E-81 T 15-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal Trad_0507 71adf89ef2a5dd772bf701ddb4bb570f 588 Pfam PF01063 Amino-transferase class IV 375 569 1.0E-29 T 15-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 Trad_0507 71adf89ef2a5dd772bf701ddb4bb570f 588 SUPERFAMILY SSF56322 25 368 3.4E-100 T 15-10-2018 IPR005801 ADC synthase GO:0009058 Trad_0507 71adf89ef2a5dd772bf701ddb4bb570f 588 PRINTS PR00095 Anthranilate synthase component I signature 318 332 4.1E-14 T 15-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Trad_0507 71adf89ef2a5dd772bf701ddb4bb570f 588 PRINTS PR00095 Anthranilate synthase component I signature 223 236 4.1E-14 T 15-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Trad_0507 71adf89ef2a5dd772bf701ddb4bb570f 588 PRINTS PR00095 Anthranilate synthase component I signature 209 222 4.1E-14 T 15-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Trad_0507 71adf89ef2a5dd772bf701ddb4bb570f 588 PRINTS PR00095 Anthranilate synthase component I signature 303 317 4.1E-14 T 15-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Trad_0507 71adf89ef2a5dd772bf701ddb4bb570f 588 Gene3D G3DSA:3.20.10.10 451 572 7.6E-34 T 15-10-2018 Trad_0507 71adf89ef2a5dd772bf701ddb4bb570f 588 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 47 365 1.3E-99 T 15-10-2018 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543 Trad_0507 71adf89ef2a5dd772bf701ddb4bb570f 588 SUPERFAMILY SSF56752 317 570 2.49E-36 T 15-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 Trad_0507 71adf89ef2a5dd772bf701ddb4bb570f 588 Gene3D G3DSA:3.60.120.10 41 363 2.0E-100 T 15-10-2018 IPR005801 ADC synthase GO:0009058 Trad_2264 3aed7b7758d5c0623ff3132d9fd286aa 395 Pfam PF13360 PQQ-like domain 120 273 3.4E-7 T 15-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat Trad_2264 3aed7b7758d5c0623ff3132d9fd286aa 395 Gene3D G3DSA:2.120.10.30 23 293 7.8E-12 T 15-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like Trad_2264 3aed7b7758d5c0623ff3132d9fd286aa 395 SUPERFAMILY SSF101898 40 241 3.14E-15 T 15-10-2018 Trad_0629 e18baa9279d8a291f49134d709f5cf4e 441 Gene3D G3DSA:1.10.630.10 21 417 6.5E-37 T 15-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 Trad_0629 e18baa9279d8a291f49134d709f5cf4e 441 Pfam PF00067 Cytochrome P450 270 407 9.4E-18 T 15-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Trad_0629 e18baa9279d8a291f49134d709f5cf4e 441 SUPERFAMILY SSF48264 45 414 3.01E-41 T 15-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 Trad_0241 c61c40d8ef8670409d7e2219daf2bc47 223 SUPERFAMILY SSF51735 4 136 1.68E-35 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_0241 c61c40d8ef8670409d7e2219daf2bc47 223 Gene3D G3DSA:3.30.70.1450 139 216 3.0E-17 T 15-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Trad_0241 c61c40d8ef8670409d7e2219daf2bc47 223 Gene3D G3DSA:3.40.50.720 1 138 2.0E-33 T 15-10-2018 Trad_0241 c61c40d8ef8670409d7e2219daf2bc47 223 SUPERFAMILY SSF116726 133 217 3.79E-14 T 15-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Trad_0241 c61c40d8ef8670409d7e2219daf2bc47 223 Pfam PF02080 TrkA-C domain 162 217 4.3E-9 T 15-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 Trad_0241 c61c40d8ef8670409d7e2219daf2bc47 223 Pfam PF02254 TrkA-N domain 6 121 1.6E-27 T 15-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 Trad_0718 ff3b0e1df55c972592ce9b14af7afef3 620 Gene3D G3DSA:3.20.20.80 316 619 1.1E-60 T 15-10-2018 Trad_0718 ff3b0e1df55c972592ce9b14af7afef3 620 Gene3D G3DSA:2.60.120.260 19 191 8.3E-44 T 15-10-2018 IPR008979 Galactose-binding-like domain superfamily Trad_0718 ff3b0e1df55c972592ce9b14af7afef3 620 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 316 541 1.0E-11 T 15-10-2018 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 Trad_0718 ff3b0e1df55c972592ce9b14af7afef3 620 SUPERFAMILY SSF49303 232 314 4.68E-5 T 15-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily Trad_0718 ff3b0e1df55c972592ce9b14af7afef3 620 SUPERFAMILY SSF49785 23 192 1.2E-48 T 15-10-2018 IPR008979 Galactose-binding-like domain superfamily Trad_0718 ff3b0e1df55c972592ce9b14af7afef3 620 SUPERFAMILY SSF51445 316 610 5.98E-62 T 15-10-2018 IPR017853 Glycoside hydrolase superfamily Trad_0718 ff3b0e1df55c972592ce9b14af7afef3 620 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 78 150 7.8E-13 T 15-10-2018 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 Trad_0926 280df6a348009b2b854b79e70e2f9dd0 302 Gene3D G3DSA:3.40.50.720 14 299 2.4E-93 T 15-10-2018 Trad_0926 280df6a348009b2b854b79e70e2f9dd0 302 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 147 1.6E-10 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_0926 280df6a348009b2b854b79e70e2f9dd0 302 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 208 227 1.6E-10 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_0926 280df6a348009b2b854b79e70e2f9dd0 302 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 188 196 1.6E-10 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_0926 280df6a348009b2b854b79e70e2f9dd0 302 SUPERFAMILY SSF51735 59 298 1.61E-84 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_0926 280df6a348009b2b854b79e70e2f9dd0 302 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 195 223 - T 15-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Trad_0926 280df6a348009b2b854b79e70e2f9dd0 302 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 263 283 3.8E-38 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_0926 280df6a348009b2b854b79e70e2f9dd0 302 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 61 78 3.8E-38 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_0926 280df6a348009b2b854b79e70e2f9dd0 302 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 229 246 3.8E-38 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_0926 280df6a348009b2b854b79e70e2f9dd0 302 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 136 147 3.8E-38 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_0926 280df6a348009b2b854b79e70e2f9dd0 302 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 198 3.8E-38 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_0926 280df6a348009b2b854b79e70e2f9dd0 302 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 227 3.8E-38 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_0926 280df6a348009b2b854b79e70e2f9dd0 302 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 66 298 4.3E-65 T 15-10-2018 Trad_0300 a158818b575302cc33be8683d5516815 762 Gene3D G3DSA:3.40.50.300 517 692 9.9E-55 T 15-10-2018 Trad_0300 a158818b575302cc33be8683d5516815 762 Gene3D G3DSA:2.40.50.140 121 218 1.0E-18 T 15-10-2018 Trad_0300 a158818b575302cc33be8683d5516815 762 Pfam PF00270 DEAD/DEAH box helicase 338 491 6.8E-17 T 15-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Trad_0300 a158818b575302cc33be8683d5516815 762 SUPERFAMILY SSF52540 254 513 2.79E-53 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_0300 a158818b575302cc33be8683d5516815 762 SUPERFAMILY SSF50249 91 248 2.4E-37 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold Trad_0300 a158818b575302cc33be8683d5516815 762 SMART SM00487 331 519 8.6E-27 T 15-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Trad_0300 a158818b575302cc33be8683d5516815 762 SUPERFAMILY SSF52540 454 662 6.66E-38 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_0300 a158818b575302cc33be8683d5516815 762 SMART SM00490 571 652 5.5E-20 T 15-10-2018 IPR001650 Helicase, C-terminal Trad_0300 a158818b575302cc33be8683d5516815 762 Pfam PF17191 RecG wedge domain 91 245 9.5E-21 T 15-10-2018 IPR033454 RecG, wedge domain Trad_0300 a158818b575302cc33be8683d5516815 762 Gene3D G3DSA:3.40.50.300 291 510 2.2E-80 T 15-10-2018 Trad_0300 a158818b575302cc33be8683d5516815 762 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 102 726 4.5E-212 T 15-10-2018 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 Trad_0300 a158818b575302cc33be8683d5516815 762 Pfam PF00271 Helicase conserved C-terminal domain 538 651 8.0E-18 T 15-10-2018 IPR001650 Helicase, C-terminal Trad_1066 cc5d16bde42c50a47bb725bf2891a5cf 310 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 265 310 2.0E-7 T 15-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Trad_1066 cc5d16bde42c50a47bb725bf2891a5cf 310 SUPERFAMILY SSF47789 248 309 2.22E-13 T 15-10-2018 Trad_1066 cc5d16bde42c50a47bb725bf2891a5cf 310 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 15 309 7.4E-94 T 15-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Trad_1066 cc5d16bde42c50a47bb725bf2891a5cf 310 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 4 310 32.273 T 15-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Trad_1066 cc5d16bde42c50a47bb725bf2891a5cf 310 SUPERFAMILY SSF56553 45 165 5.62E-40 T 15-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Trad_1066 cc5d16bde42c50a47bb725bf2891a5cf 310 Gene3D G3DSA:2.170.120.12 45 164 5.6E-84 T 15-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Trad_1066 cc5d16bde42c50a47bb725bf2891a5cf 310 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 246 302 3.6E-16 T 15-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Trad_1066 cc5d16bde42c50a47bb725bf2891a5cf 310 SMART SM00662 15 221 1.1E-91 T 15-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Trad_1066 cc5d16bde42c50a47bb725bf2891a5cf 310 Gene3D G3DSA:1.10.150.20 245 310 3.3E-16 T 15-10-2018 Trad_1066 cc5d16bde42c50a47bb725bf2891a5cf 310 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 54 147 8.5E-25 T 15-10-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Trad_1066 cc5d16bde42c50a47bb725bf2891a5cf 310 Gene3D G3DSA:3.30.1360.10 14 215 5.6E-84 T 15-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Trad_1066 cc5d16bde42c50a47bb725bf2891a5cf 310 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 21 215 1.4E-20 T 15-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Trad_1066 cc5d16bde42c50a47bb725bf2891a5cf 310 SUPERFAMILY SSF55257 11 218 2.75E-28 T 15-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Trad_1847 dd5b30dc667c2d056e81f331fce87e95 377 Gene3D G3DSA:3.30.360.10 137 350 2.1E-78 T 15-10-2018 Trad_1847 dd5b30dc667c2d056e81f331fce87e95 377 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 144 250 1.3E-12 T 15-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 Trad_1847 dd5b30dc667c2d056e81f331fce87e95 377 SUPERFAMILY SSF55347 138 282 4.91E-32 T 15-10-2018 Trad_1847 dd5b30dc667c2d056e81f331fce87e95 377 Gene3D G3DSA:3.40.50.720 18 328 2.1E-78 T 15-10-2018 Trad_1847 dd5b30dc667c2d056e81f331fce87e95 377 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 15 131 1.8E-19 T 15-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 Trad_1847 dd5b30dc667c2d056e81f331fce87e95 377 SUPERFAMILY SSF51735 11 164 3.12E-40 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_1479 b23c631bfafd394b98e5c23fe2f4c6d3 135 Pfam PF14242 Domain of unknown function (DUF4342) 39 120 1.0E-26 T 15-10-2018 IPR025642 Domain of unknown function DUF4342 Trad_2905 930941d8be890b1135dd91093063c532 241 SUPERFAMILY SSF48150 26 237 1.44E-53 T 15-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 Trad_2905 930941d8be890b1135dd91093063c532 241 PIRSF PIRSF001435 16 240 4.7E-54 T 15-10-2018 Trad_2905 930941d8be890b1135dd91093063c532 241 SMART SM00478 55 215 1.5E-27 T 15-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 Trad_2905 930941d8be890b1135dd91093063c532 241 Gene3D G3DSA:1.10.1670.10 23 233 3.6E-73 T 15-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 Trad_2905 930941d8be890b1135dd91093063c532 241 Gene3D G3DSA:1.10.340.30 41 158 3.6E-73 T 15-10-2018 Trad_2905 930941d8be890b1135dd91093063c532 241 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 51 188 3.8E-13 T 15-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 Trad_2735 b70fc8a63217449391d7c464d664e11e 114 Gene3D G3DSA:3.30.428.10 1 111 2.7E-32 T 15-10-2018 IPR036265 HIT-like superfamily Trad_2735 b70fc8a63217449391d7c464d664e11e 114 PRINTS PR00332 Histidine triad family signature 6 22 4.8E-18 T 15-10-2018 IPR001310 Histidine triad (HIT) protein Trad_2735 b70fc8a63217449391d7c464d664e11e 114 PRINTS PR00332 Histidine triad family signature 27 45 4.8E-18 T 15-10-2018 IPR001310 Histidine triad (HIT) protein Trad_2735 b70fc8a63217449391d7c464d664e11e 114 PRINTS PR00332 Histidine triad family signature 94 104 4.8E-18 T 15-10-2018 IPR001310 Histidine triad (HIT) protein Trad_2735 b70fc8a63217449391d7c464d664e11e 114 ProSitePatterns PS00892 HIT domain signature. 87 105 - T 15-10-2018 IPR019808 Histidine triad, conserved site Trad_2735 b70fc8a63217449391d7c464d664e11e 114 Pfam PF01230 HIT domain 13 108 1.7E-24 T 15-10-2018 IPR001310 Histidine triad (HIT) protein Trad_2735 b70fc8a63217449391d7c464d664e11e 114 SUPERFAMILY SSF54197 2 109 9.59E-31 T 15-10-2018 IPR036265 HIT-like superfamily Trad_2980 486ce5b3ddff832fc9e31bb443c1f823 342 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 8 341 24.239 T 15-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Trad_2980 486ce5b3ddff832fc9e31bb443c1f823 342 Pfam PF00146 NADH dehydrogenase 15 334 7.7E-120 T 15-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Trad_2980 486ce5b3ddff832fc9e31bb443c1f823 342 ProSitePatterns PS00667 Respiratory-chain NADH dehydrogenase subunit 1 signature 1. 54 69 - T 15-10-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Trad_2980 486ce5b3ddff832fc9e31bb443c1f823 342 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 219 232 - T 15-10-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Trad_1311 14578e667b69dd24cafdca8564bf6e27 146 Gene3D G3DSA:3.30.700.10 5 139 4.2E-11 T 15-10-2018 Trad_1311 14578e667b69dd24cafdca8564bf6e27 146 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 23 1.8E-5 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site Trad_1311 14578e667b69dd24cafdca8564bf6e27 146 SUPERFAMILY SSF54523 5 106 1.26E-13 T 15-10-2018 Trad_1352 95899f9622e7388647a58c75365bfe12 350 SUPERFAMILY SSF55681 108 347 1.33E-71 T 15-10-2018 Trad_1352 95899f9622e7388647a58c75365bfe12 350 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 24 346 43.639 T 15-10-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 Trad_1352 95899f9622e7388647a58c75365bfe12 350 Gene3D G3DSA:3.30.930.10 23 349 1.8E-107 T 15-10-2018 Trad_1352 95899f9622e7388647a58c75365bfe12 350 Pfam PF01409 tRNA synthetases class II core domain (F) 108 346 5.3E-91 T 15-10-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 Trad_1352 95899f9622e7388647a58c75365bfe12 350 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 36 103 4.1E-21 T 15-10-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 Trad_1352 95899f9622e7388647a58c75365bfe12 350 SUPERFAMILY SSF46589 28 114 2.14E-19 T 15-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 Trad_1690 2a323107a260685a176cabe4776af5e0 287 Gene3D G3DSA:3.40.50.720 1 193 2.3E-70 T 15-10-2018 Trad_1690 2a323107a260685a176cabe4776af5e0 287 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 190 286 1.2E-35 T 15-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 Trad_1690 2a323107a260685a176cabe4776af5e0 287 SUPERFAMILY SSF48179 189 287 7.48E-33 T 15-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Trad_1690 2a323107a260685a176cabe4776af5e0 287 PIRSF PIRSF000105 2 287 2.9E-91 T 15-10-2018 IPR022694 3-hydroxyacyl-CoA dehydrogenase GO:0003857|GO:0006631|GO:0055114|GO:0070403 Trad_1690 2a323107a260685a176cabe4776af5e0 287 SUPERFAMILY SSF51735 8 189 3.75E-59 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_1690 2a323107a260685a176cabe4776af5e0 287 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 9 187 2.0E-66 T 15-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 Trad_1690 2a323107a260685a176cabe4776af5e0 287 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 187 212 - T 15-10-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 Trad_1690 2a323107a260685a176cabe4776af5e0 287 Gene3D G3DSA:1.10.1040.50 194 287 1.5E-35 T 15-10-2018 Trad_1756 d62a6346c60445e179cf7bc1876a2b8d 467 Hamap MF_00006 Argininosuccinate lyase [argH]. 10 461 44.701 T 15-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Trad_1756 d62a6346c60445e179cf7bc1876a2b8d 467 Gene3D G3DSA:1.20.200.10 115 453 6.1E-150 T 15-10-2018 Trad_1756 d62a6346c60445e179cf7bc1876a2b8d 467 TIGRFAM TIGR00838 argH: argininosuccinate lyase 11 463 7.1E-196 T 15-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Trad_1756 d62a6346c60445e179cf7bc1876a2b8d 467 SUPERFAMILY SSF48557 11 463 6.44E-155 T 15-10-2018 IPR008948 L-Aspartase-like GO:0003824 Trad_1756 d62a6346c60445e179cf7bc1876a2b8d 467 PRINTS PR00145 Argininosuccinate lyase family signature 150 170 4.2E-69 T 15-10-2018 Trad_1756 d62a6346c60445e179cf7bc1876a2b8d 467 PRINTS PR00145 Argininosuccinate lyase family signature 201 217 4.2E-69 T 15-10-2018 Trad_1756 d62a6346c60445e179cf7bc1876a2b8d 467 PRINTS PR00145 Argininosuccinate lyase family signature 318 337 4.2E-69 T 15-10-2018 Trad_1756 d62a6346c60445e179cf7bc1876a2b8d 467 PRINTS PR00145 Argininosuccinate lyase family signature 109 131 4.2E-69 T 15-10-2018 Trad_1756 d62a6346c60445e179cf7bc1876a2b8d 467 PRINTS PR00145 Argininosuccinate lyase family signature 283 299 4.2E-69 T 15-10-2018 Trad_1756 d62a6346c60445e179cf7bc1876a2b8d 467 PRINTS PR00145 Argininosuccinate lyase family signature 239 263 4.2E-69 T 15-10-2018 Trad_1756 d62a6346c60445e179cf7bc1876a2b8d 467 Gene3D G3DSA:1.10.40.30 370 440 6.1E-150 T 15-10-2018 Trad_1756 d62a6346c60445e179cf7bc1876a2b8d 467 Pfam PF00206 Lyase 14 308 5.5E-76 T 15-10-2018 IPR022761 Fumarate lyase, N-terminal Trad_1756 d62a6346c60445e179cf7bc1876a2b8d 467 PRINTS PR00149 Fumarate lyase superfamily signature 239 266 3.2E-28 T 15-10-2018 IPR000362 Fumarate lyase family Trad_1756 d62a6346c60445e179cf7bc1876a2b8d 467 PRINTS PR00149 Fumarate lyase superfamily signature 110 128 3.2E-28 T 15-10-2018 IPR000362 Fumarate lyase family Trad_1756 d62a6346c60445e179cf7bc1876a2b8d 467 PRINTS PR00149 Fumarate lyase superfamily signature 283 299 3.2E-28 T 15-10-2018 IPR000362 Fumarate lyase family Trad_1756 d62a6346c60445e179cf7bc1876a2b8d 467 PRINTS PR00149 Fumarate lyase superfamily signature 155 173 3.2E-28 T 15-10-2018 IPR000362 Fumarate lyase family Trad_1756 d62a6346c60445e179cf7bc1876a2b8d 467 ProSitePatterns PS00163 Fumarate lyases signature. 283 292 - T 15-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 Trad_1756 d62a6346c60445e179cf7bc1876a2b8d 467 Gene3D G3DSA:1.10.275.50 8 114 7.2E-40 T 15-10-2018 Trad_1756 d62a6346c60445e179cf7bc1876a2b8d 467 Pfam PF14698 Argininosuccinate lyase C-terminal 371 439 3.0E-24 T 15-10-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Trad_0947 75bb9beb9d2a57d4f2127230c25d76e7 448 Pfam PF13416 Bacterial extracellular solute-binding protein 44 358 2.5E-24 T 15-10-2018 IPR006059 Bacterial extracellular solute-binding protein Trad_0947 75bb9beb9d2a57d4f2127230c25d76e7 448 SUPERFAMILY SSF53850 23 443 8.4E-49 T 15-10-2018 Trad_0947 75bb9beb9d2a57d4f2127230c25d76e7 448 Gene3D G3DSA:3.40.190.10 20 446 8.7E-54 T 15-10-2018 Trad_0098 e597f8dfc88384cae2a1adc3a8e61f83 174 Pfam PF04982 HPP family 53 157 1.0E-15 T 15-10-2018 IPR007065 HPP Trad_1001 6e3974b57a8336d31175c20b8b2476e0 99 Pfam PF00708 Acylphosphatase 16 96 5.3E-24 T 15-10-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 Trad_1001 6e3974b57a8336d31175c20b8b2476e0 99 Gene3D G3DSA:3.30.70.100 13 99 2.3E-29 T 15-10-2018 Trad_1001 6e3974b57a8336d31175c20b8b2476e0 99 SUPERFAMILY SSF54975 13 97 9.38E-25 T 15-10-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 Trad_2908 63f705aa1a7799044ac0f16be2975108 251 PRINTS PR00251 Bacterial opsin signature 175 193 2.0E-22 T 15-10-2018 IPR001425 Archaeal/bacterial/fungal rhodopsins GO:0005216|GO:0006811|GO:0016020 Trad_2908 63f705aa1a7799044ac0f16be2975108 251 PRINTS PR00251 Bacterial opsin signature 7 26 2.0E-22 T 15-10-2018 IPR001425 Archaeal/bacterial/fungal rhodopsins GO:0005216|GO:0006811|GO:0016020 Trad_2908 63f705aa1a7799044ac0f16be2975108 251 PRINTS PR00251 Bacterial opsin signature 82 103 2.0E-22 T 15-10-2018 IPR001425 Archaeal/bacterial/fungal rhodopsins GO:0005216|GO:0006811|GO:0016020 Trad_2908 63f705aa1a7799044ac0f16be2975108 251 PRINTS PR00251 Bacterial opsin signature 110 129 2.0E-22 T 15-10-2018 IPR001425 Archaeal/bacterial/fungal rhodopsins GO:0005216|GO:0006811|GO:0016020 Trad_2908 63f705aa1a7799044ac0f16be2975108 251 PRINTS PR00251 Bacterial opsin signature 134 155 2.0E-22 T 15-10-2018 IPR001425 Archaeal/bacterial/fungal rhodopsins GO:0005216|GO:0006811|GO:0016020 Trad_2908 63f705aa1a7799044ac0f16be2975108 251 PRINTS PR00251 Bacterial opsin signature 207 225 2.0E-22 T 15-10-2018 IPR001425 Archaeal/bacterial/fungal rhodopsins GO:0005216|GO:0006811|GO:0016020 Trad_2908 63f705aa1a7799044ac0f16be2975108 251 SUPERFAMILY SSF81321 5 233 4.58E-40 T 15-10-2018 Trad_2908 63f705aa1a7799044ac0f16be2975108 251 Gene3D G3DSA:1.20.1070.10 4 232 2.3E-51 T 15-10-2018 Trad_2908 63f705aa1a7799044ac0f16be2975108 251 SMART SM01021 5 240 1.6E-34 T 15-10-2018 IPR001425 Archaeal/bacterial/fungal rhodopsins GO:0005216|GO:0006811|GO:0016020 Trad_2908 63f705aa1a7799044ac0f16be2975108 251 Pfam PF01036 Bacteriorhodopsin-like protein 7 230 1.1E-37 T 15-10-2018 IPR001425 Archaeal/bacterial/fungal rhodopsins GO:0005216|GO:0006811|GO:0016020 Trad_1395 521bb659efb878188d82906055b6afba 346 Gene3D G3DSA:3.30.360.10 148 318 2.5E-104 T 15-10-2018 Trad_1395 521bb659efb878188d82906055b6afba 346 Gene3D G3DSA:3.40.50.720 8 332 2.5E-104 T 15-10-2018 Trad_1395 521bb659efb878188d82906055b6afba 346 Hamap MF_02083 [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate reductase [lysY]. 5 346 48.501 T 15-10-2018 IPR037535 [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate reductase GO:0016620 Trad_1395 521bb659efb878188d82906055b6afba 346 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 6 141 3.4E-22 T 15-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 Trad_1395 521bb659efb878188d82906055b6afba 346 SUPERFAMILY SSF55347 150 314 9.16E-38 T 15-10-2018 Trad_1395 521bb659efb878188d82906055b6afba 346 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 6 346 3.3E-110 T 15-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Trad_1395 521bb659efb878188d82906055b6afba 346 SUPERFAMILY SSF51735 4 167 2.16E-39 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_1395 521bb659efb878188d82906055b6afba 346 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 5 340 37.867 T 15-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Trad_1395 521bb659efb878188d82906055b6afba 346 SMART SM00859 6 142 8.2E-43 T 15-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 Trad_0006 e2dff29474286c94293da3d6581246e9 94 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 16 90 19.843 T 15-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_0006 e2dff29474286c94293da3d6581246e9 94 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 39 88 1.0E-14 T 15-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_0006 e2dff29474286c94293da3d6581246e9 94 Pfam PF01084 Ribosomal protein S18 36 84 6.5E-21 T 15-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_0006 e2dff29474286c94293da3d6581246e9 94 Gene3D G3DSA:4.10.640.10 4 94 4.3E-28 T 15-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_0006 e2dff29474286c94293da3d6581246e9 94 TIGRFAM TIGR00165 S18: ribosomal protein bS18 23 89 1.3E-24 T 15-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_0006 e2dff29474286c94293da3d6581246e9 94 SUPERFAMILY SSF46911 20 90 4.05E-25 T 15-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_0006 e2dff29474286c94293da3d6581246e9 94 PRINTS PR00974 Ribosomal protein S18 family signature 55 62 2.7E-15 T 15-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_0006 e2dff29474286c94293da3d6581246e9 94 PRINTS PR00974 Ribosomal protein S18 family signature 63 77 2.7E-15 T 15-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_0006 e2dff29474286c94293da3d6581246e9 94 PRINTS PR00974 Ribosomal protein S18 family signature 77 87 2.7E-15 T 15-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_0006 e2dff29474286c94293da3d6581246e9 94 PRINTS PR00974 Ribosomal protein S18 family signature 45 55 2.7E-15 T 15-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_1097 287a30ccb9b7f978f52388319a3da1d4 438 Pfam PF00202 Aminotransferase class-III 22 427 6.2E-130 T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Trad_1097 287a30ccb9b7f978f52388319a3da1d4 438 SUPERFAMILY SSF53383 16 428 1.02E-136 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Trad_1097 287a30ccb9b7f978f52388319a3da1d4 438 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 243 280 - T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Trad_1097 287a30ccb9b7f978f52388319a3da1d4 438 Gene3D G3DSA:3.90.1150.10 3 422 1.6E-169 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Trad_1097 287a30ccb9b7f978f52388319a3da1d4 438 Gene3D G3DSA:3.40.640.10 58 326 1.6E-169 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Trad_1097 287a30ccb9b7f978f52388319a3da1d4 438 TIGRFAM TIGR00700 GABAtrnsam: 4-aminobutyrate transaminase 9 428 8.5E-158 T 15-10-2018 IPR004632 4-aminobutyrate aminotransferase, bacterial GO:0003867|GO:0009448 Trad_1097 287a30ccb9b7f978f52388319a3da1d4 438 PIRSF PIRSF000521 19 128 1.9E-8 T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Trad_1097 287a30ccb9b7f978f52388319a3da1d4 438 PIRSF PIRSF000521 121 430 4.6E-40 T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Trad_2598 ba5f0d3c4c73fd0fbae8005cd28618bc 207 SUPERFAMILY SSF53328 10 195 1.7E-55 T 15-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Trad_2598 ba5f0d3c4c73fd0fbae8005cd28618bc 207 Pfam PF00551 Formyl transferase 10 187 3.5E-50 T 15-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Trad_2598 ba5f0d3c4c73fd0fbae8005cd28618bc 207 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 139 162 - T 15-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Trad_2598 ba5f0d3c4c73fd0fbae8005cd28618bc 207 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 10 193 30.732 T 15-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 Trad_2598 ba5f0d3c4c73fd0fbae8005cd28618bc 207 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 9 194 8.1E-64 T 15-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 Trad_2598 ba5f0d3c4c73fd0fbae8005cd28618bc 207 Gene3D G3DSA:3.40.50.170 2 205 1.1E-70 T 15-10-2018 Trad_0659 5e3d34c24fb2999005581fb0226be767 142 Gene3D G3DSA:3.40.50.2020 15 142 9.2E-19 T 15-10-2018 Trad_0659 5e3d34c24fb2999005581fb0226be767 142 Pfam PF00156 Phosphoribosyl transferase domain 29 113 1.4E-17 T 15-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 Trad_0659 5e3d34c24fb2999005581fb0226be767 142 SUPERFAMILY SSF53271 17 115 4.33E-20 T 15-10-2018 IPR029057 Phosphoribosyltransferase-like Trad_2305 53e416abc66f88667f6e0ed4486ff1cf 320 Gene3D G3DSA:3.100.10.20 5 95 8.6E-28 T 15-10-2018 Trad_2305 53e416abc66f88667f6e0ed4486ff1cf 320 Gene3D G3DSA:1.20.120.920 96 291 1.4E-74 T 15-10-2018 Trad_2305 53e416abc66f88667f6e0ed4486ff1cf 320 TIGRFAM TIGR00287 cas1: CRISPR-associated endonuclease Cas1 134 241 4.2E-26 T 15-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 Trad_2305 53e416abc66f88667f6e0ed4486ff1cf 320 TIGRFAM TIGR03638 cas1_ECOLI: CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI 9 274 1.2E-113 T 15-10-2018 IPR019851 CRISPR-associated protein Cas1, ECOLI subtype GO:0004520|GO:0043571|GO:0046872 Trad_2305 53e416abc66f88667f6e0ed4486ff1cf 320 Hamap MF_01470 CRISPR-associated endonuclease Cas1 [cas1]. 9 265 18.332 T 15-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 Trad_2305 53e416abc66f88667f6e0ed4486ff1cf 320 Pfam PF01867 CRISPR associated protein Cas1 134 230 1.6E-8 T 15-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 Trad_1315 c6e5ef3d4c546b5e74391ebe523980af 187 Gene3D G3DSA:1.10.260.40 1 69 3.9E-19 T 15-10-2018 Trad_1315 c6e5ef3d4c546b5e74391ebe523980af 187 SUPERFAMILY SSF47413 2 69 4.83E-18 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Trad_1315 c6e5ef3d4c546b5e74391ebe523980af 187 SMART SM00530 9 64 1.6E-16 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Trad_1315 c6e5ef3d4c546b5e74391ebe523980af 187 Pfam PF01381 Helix-turn-helix 10 64 1.3E-14 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Trad_1315 c6e5ef3d4c546b5e74391ebe523980af 187 Gene3D G3DSA:2.60.120.10 91 179 6.4E-17 T 15-10-2018 IPR014710 RmlC-like jelly roll fold Trad_1315 c6e5ef3d4c546b5e74391ebe523980af 187 SUPERFAMILY SSF51182 50 183 3.47E-21 T 15-10-2018 IPR011051 RmlC-like cupin domain superfamily Trad_1315 c6e5ef3d4c546b5e74391ebe523980af 187 Pfam PF07883 Cupin domain 110 177 4.0E-14 T 15-10-2018 IPR013096 Cupin 2, conserved barrel Trad_2427 fb016d9c50b2ee8aa8e6795c04415eae 386 Gene3D G3DSA:3.30.300.30 295 381 1.2E-6 T 15-10-2018 Trad_2427 fb016d9c50b2ee8aa8e6795c04415eae 386 Pfam PF00501 AMP-binding enzyme 133 258 1.3E-5 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Trad_2427 fb016d9c50b2ee8aa8e6795c04415eae 386 Gene3D G3DSA:3.40.50.12780 3 294 1.7E-62 T 15-10-2018 Trad_2427 fb016d9c50b2ee8aa8e6795c04415eae 386 SUPERFAMILY SSF56801 83 361 4.48E-31 T 15-10-2018 Trad_1269 5c0d30fc363cb9155790229892e04231 376 Pfam PF01594 AI-2E family transporter 17 349 7.3E-60 T 15-10-2018 IPR002549 Transmembrane protein TqsA-like Trad_1900 c95aebda04eb7cc93056b1871a16932a 170 SUPERFAMILY SSF46626 15 130 1.25E-20 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Trad_1900 c95aebda04eb7cc93056b1871a16932a 170 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 38 123 1.8E-9 T 15-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Trad_1900 c95aebda04eb7cc93056b1871a16932a 170 Gene3D G3DSA:1.10.760.10 37 168 1.1E-38 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Trad_0221 7731c5cec2c0d027bb738c7096f25c2c 330 PRINTS PR00073 Coprogen oxidase signature 60 81 5.2E-64 T 15-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Trad_0221 7731c5cec2c0d027bb738c7096f25c2c 330 PRINTS PR00073 Coprogen oxidase signature 43 59 5.2E-64 T 15-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Trad_0221 7731c5cec2c0d027bb738c7096f25c2c 330 PRINTS PR00073 Coprogen oxidase signature 143 165 5.2E-64 T 15-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Trad_0221 7731c5cec2c0d027bb738c7096f25c2c 330 PRINTS PR00073 Coprogen oxidase signature 283 309 5.2E-64 T 15-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Trad_0221 7731c5cec2c0d027bb738c7096f25c2c 330 PRINTS PR00073 Coprogen oxidase signature 180 209 5.2E-64 T 15-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Trad_0221 7731c5cec2c0d027bb738c7096f25c2c 330 PRINTS PR00073 Coprogen oxidase signature 255 282 5.2E-64 T 15-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Trad_0221 7731c5cec2c0d027bb738c7096f25c2c 330 SUPERFAMILY SSF102886 16 321 4.58E-118 T 15-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Trad_0221 7731c5cec2c0d027bb738c7096f25c2c 330 PIRSF PIRSF000166 4 323 1.2E-114 T 15-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Trad_0221 7731c5cec2c0d027bb738c7096f25c2c 330 Pfam PF01218 Coproporphyrinogen III oxidase 21 321 2.2E-118 T 15-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Trad_0221 7731c5cec2c0d027bb738c7096f25c2c 330 Gene3D G3DSA:3.40.1500.10 7 322 1.9E-123 T 15-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Trad_0221 7731c5cec2c0d027bb738c7096f25c2c 330 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 184 208 - T 15-10-2018 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Trad_1895 549836fded38480e470ce7230a7a4b17 443 Gene3D G3DSA:3.30.300.30 326 442 2.5E-28 T 15-10-2018 Trad_1895 549836fded38480e470ce7230a7a4b17 443 Gene3D G3DSA:3.40.50.12780 2 325 2.3E-123 T 15-10-2018 Trad_1895 549836fded38480e470ce7230a7a4b17 443 Pfam PF00501 AMP-binding enzyme 83 284 1.0E-12 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Trad_1895 549836fded38480e470ce7230a7a4b17 443 PIRSF PIRSF006444 1 442 2.7E-181 T 15-10-2018 IPR011880 Phenylacetate-CoA ligase GO:0010124|GO:0047475 KEGG: 00360+6.2.1.30|MetaCyc: PWY-1341|MetaCyc: PWY-6318|MetaCyc: PWY-7716 Trad_1895 549836fded38480e470ce7230a7a4b17 443 SUPERFAMILY SSF56801 20 436 1.27E-57 T 15-10-2018 Trad_1895 549836fded38480e470ce7230a7a4b17 443 Pfam PF14535 AMP-binding enzyme C-terminal domain 334 440 2.6E-23 T 15-10-2018 IPR028154 AMP-dependent ligase, C-terminal Trad_2555 0af6906677accba857c933d03e29f717 361 Gene3D G3DSA:3.10.20.30 47 359 4.8E-141 T 15-10-2018 IPR012675 Beta-grasp domain superfamily Trad_2555 0af6906677accba857c933d03e29f717 361 PIRSF PIRSF006641 1 361 1.8E-141 T 15-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 Trad_2555 0af6906677accba857c933d03e29f717 361 Gene3D G3DSA:3.40.50.300 3 276 4.8E-141 T 15-10-2018 Trad_2555 0af6906677accba857c933d03e29f717 361 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 1 361 42.818 T 15-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 Trad_2555 0af6906677accba857c933d03e29f717 361 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 2 361 4.2E-136 T 15-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 Trad_2555 0af6906677accba857c933d03e29f717 361 Pfam PF06071 Protein of unknown function (DUF933) 277 360 2.9E-37 T 15-10-2018 IPR013029 YchF, C-terminal domain Reactome: R-HSA-114608 Trad_2555 0af6906677accba857c933d03e29f717 361 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 90 108 6.0E-34 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 Trad_2555 0af6906677accba857c933d03e29f717 361 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 73 88 6.0E-34 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 Trad_2555 0af6906677accba857c933d03e29f717 361 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 4 24 6.0E-34 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 Trad_2555 0af6906677accba857c933d03e29f717 361 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 25 43 6.0E-34 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 Trad_2555 0af6906677accba857c933d03e29f717 361 Gene3D G3DSA:1.10.150.300 116 197 4.8E-141 T 15-10-2018 IPR023192 TGS-like domain superfamily Reactome: R-HSA-114608 Trad_2555 0af6906677accba857c933d03e29f717 361 SUPERFAMILY SSF81271 277 357 3.05E-34 T 15-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 Trad_2555 0af6906677accba857c933d03e29f717 361 Pfam PF01926 50S ribosome-binding GTPase 4 124 4.0E-22 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 Trad_2555 0af6906677accba857c933d03e29f717 361 SUPERFAMILY SSF52540 3 298 9.12E-76 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_1980 eb086ff5d2e38a562f32357ab3877d85 355 Gene3D G3DSA:1.10.260.40 7 70 1.1E-20 T 15-10-2018 Trad_1980 eb086ff5d2e38a562f32357ab3877d85 355 SUPERFAMILY SSF47413 13 74 3.1E-15 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Trad_1980 eb086ff5d2e38a562f32357ab3877d85 355 Pfam PF13377 Periplasmic binding protein-like domain 185 347 7.4E-41 T 15-10-2018 Trad_1980 eb086ff5d2e38a562f32357ab3877d85 355 SUPERFAMILY SSF53822 89 349 8.83E-68 T 15-10-2018 IPR028082 Periplasmic binding protein-like I Trad_1980 eb086ff5d2e38a562f32357ab3877d85 355 Pfam PF00356 Bacterial regulatory proteins, lacI family 19 63 8.2E-15 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Trad_1980 eb086ff5d2e38a562f32357ab3877d85 355 Gene3D G3DSA:3.40.50.2300 177 307 2.4E-73 T 15-10-2018 Trad_1980 eb086ff5d2e38a562f32357ab3877d85 355 SMART SM00354 14 86 5.3E-22 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Trad_1980 eb086ff5d2e38a562f32357ab3877d85 355 Gene3D G3DSA:3.40.50.2300 71 324 2.4E-73 T 15-10-2018 Trad_0294 35dc380d53a3de206d7a4d783f21475e 251 PIRSF PIRSF021497 2 251 4.8E-50 T 15-10-2018 IPR015124 Trehalose 2-sulfotransferase GO:0016740 MetaCyc: PWY-7746 Trad_0294 35dc380d53a3de206d7a4d783f21475e 251 Pfam PF09037 Stf0 sulphotransferase 8 246 4.1E-44 T 15-10-2018 IPR024628 Sulphotransferase Stf0, domain MetaCyc: PWY-7746 Trad_0294 35dc380d53a3de206d7a4d783f21475e 251 Gene3D G3DSA:3.40.50.300 4 250 7.1E-65 T 15-10-2018 Trad_0294 35dc380d53a3de206d7a4d783f21475e 251 SUPERFAMILY SSF52540 8 249 1.02E-38 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_0922 9a8ac053c9fd2c96002eab05baccc75d 273 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Trad_0922 9a8ac053c9fd2c96002eab05baccc75d 273 Gene3D G3DSA:3.40.50.300 21 267 9.8E-66 T 15-10-2018 Trad_0922 9a8ac053c9fd2c96002eab05baccc75d 273 SMART SM00382 51 234 7.2E-19 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_0922 9a8ac053c9fd2c96002eab05baccc75d 273 Pfam PF00005 ABC transporter 42 183 9.2E-33 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Trad_0922 9a8ac053c9fd2c96002eab05baccc75d 273 SUPERFAMILY SSF52540 23 257 3.04E-70 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_0195 66815a1793b71174af478de0bf867833 188 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 29 162 7.5E-24 T 15-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ Trad_2826 eff83bdcbde7d4268ac42aa386668b1f 209 SUPERFAMILY SSF52540 3 196 3.1E-45 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_2826 eff83bdcbde7d4268ac42aa386668b1f 209 Pfam PF01712 Deoxynucleoside kinase 4 190 1.9E-39 T 15-10-2018 IPR031314 Deoxynucleoside kinase domain Trad_2826 eff83bdcbde7d4268ac42aa386668b1f 209 PIRSF PIRSF000705 1 199 5.4E-56 T 15-10-2018 IPR002624 Deoxynucleoside kinase GO:0005524|GO:0006139|GO:0019206 Trad_2826 eff83bdcbde7d4268ac42aa386668b1f 209 Gene3D G3DSA:3.40.50.300 3 190 1.6E-50 T 15-10-2018 Trad_2369 8aa1910add6b917b5108b233fdd240ee 494 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 5 206 23.17 T 15-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 Trad_2369 8aa1910add6b917b5108b233fdd240ee 494 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 4 207 4.5E-43 T 15-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 Trad_2369 8aa1910add6b917b5108b233fdd240ee 494 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 428 438 - T 15-10-2018 IPR017953 Carbohydrate kinase, predicted, conserved site Trad_2369 8aa1910add6b917b5108b233fdd240ee 494 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 220 492 18.599 T 15-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 Trad_2369 8aa1910add6b917b5108b233fdd240ee 494 Gene3D G3DSA:3.40.1190.20 213 491 3.6E-71 T 15-10-2018 IPR029056 Ribokinase-like Trad_2369 8aa1910add6b917b5108b233fdd240ee 494 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 220 488 6.8E-55 T 15-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 Trad_2369 8aa1910add6b917b5108b233fdd240ee 494 SUPERFAMILY SSF64153 1 241 1.96E-58 T 15-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 Trad_2369 8aa1910add6b917b5108b233fdd240ee 494 Pfam PF01256 Carbohydrate kinase 243 481 4.3E-43 T 15-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 Trad_2369 8aa1910add6b917b5108b233fdd240ee 494 Gene3D G3DSA:3.40.50.10260 1 212 3.9E-58 T 15-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 Trad_2369 8aa1910add6b917b5108b233fdd240ee 494 SUPERFAMILY SSF53613 222 490 2.31E-57 T 15-10-2018 IPR029056 Ribokinase-like Trad_2369 8aa1910add6b917b5108b233fdd240ee 494 PIRSF PIRSF017184 1 493 4.9E-113 T 15-10-2018 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 Trad_2369 8aa1910add6b917b5108b233fdd240ee 494 Pfam PF03853 YjeF-related protein N-terminus 26 183 8.9E-38 T 15-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 Trad_1507 832a5d0f3a65505ea445eee0380c77d3 415 Pfam PF01546 Peptidase family M20/M25/M40 79 408 1.5E-31 T 15-10-2018 IPR002933 Peptidase M20 GO:0016787 Trad_1507 832a5d0f3a65505ea445eee0380c77d3 415 SUPERFAMILY SSF53187 4 411 2.09E-78 T 15-10-2018 Trad_1507 832a5d0f3a65505ea445eee0380c77d3 415 PIRSF PIRSF001235 3 415 9.6E-136 T 15-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 Trad_1507 832a5d0f3a65505ea445eee0380c77d3 415 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 9 408 1.6E-115 T 15-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 Trad_1507 832a5d0f3a65505ea445eee0380c77d3 415 SUPERFAMILY SSF55031 217 330 4.88E-24 T 15-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain Trad_1507 832a5d0f3a65505ea445eee0380c77d3 415 Gene3D G3DSA:3.30.70.360 214 329 2.1E-132 T 15-10-2018 Trad_1507 832a5d0f3a65505ea445eee0380c77d3 415 Gene3D G3DSA:3.40.630.10 20 403 2.1E-132 T 15-10-2018 Trad_1507 832a5d0f3a65505ea445eee0380c77d3 415 Pfam PF07687 Peptidase dimerisation domain 216 315 2.4E-5 T 15-10-2018 IPR011650 Peptidase M20, dimerisation domain Trad_2331 e88253664bd1b940d71cb9af706e2c11 198 Gene3D G3DSA:2.40.40.10 25 118 2.5E-37 T 15-10-2018 IPR036908 RlpA-like domain superfamily Trad_2331 e88253664bd1b940d71cb9af706e2c11 198 Pfam PF03330 Lytic transglycolase 25 113 5.8E-26 T 15-10-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain Trad_2331 e88253664bd1b940d71cb9af706e2c11 198 Hamap MF_02071 Endolytic peptidoglycan transglycosylase RlpA [rlpA]. 12 117 23.556 T 15-10-2018 IPR034718 Endolytic peptidoglycan transglycosylase RlpA GO:0016829 Trad_2331 e88253664bd1b940d71cb9af706e2c11 198 SUPERFAMILY SSF50685 23 113 5.75E-11 T 15-10-2018 IPR036908 RlpA-like domain superfamily Trad_2331 e88253664bd1b940d71cb9af706e2c11 198 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 27 119 9.3E-47 T 15-10-2018 IPR012997 Rare lipoprotein A Trad_0169 ca1457bebf21f193a5ed019bc62e258f 77 Gene3D G3DSA:1.20.1070.10 1 46 7.3E-8 T 15-10-2018 Trad_0468 dfc78553f598b16e667f3ca8cc82d58e 196 Pfam PF04854 Protein of unknown function, DUF624 20 89 1.2E-11 T 15-10-2018 IPR006938 Protein of unknown function DUF624 Trad_1852 c3b6450136dc0b149a831d68fe50ea26 328 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 121 327 1.4E-22 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Trad_1852 c3b6450136dc0b149a831d68fe50ea26 328 SUPERFAMILY SSF161098 96 309 1.09E-10 T 15-10-2018 IPR035906 MetI-like superfamily Trad_1852 c3b6450136dc0b149a831d68fe50ea26 328 Gene3D G3DSA:1.10.3720.10 92 320 1.5E-10 T 15-10-2018 IPR035906 MetI-like superfamily Trad_2896 eb8caae942dae3c6c3a5a56ba2b7a69d 401 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 254 382 5.3E-6 T 15-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 Trad_2896 eb8caae942dae3c6c3a5a56ba2b7a69d 401 Gene3D G3DSA:3.40.50.2000 212 382 3.5E-29 T 15-10-2018 Trad_2896 eb8caae942dae3c6c3a5a56ba2b7a69d 401 Gene3D G3DSA:3.40.50.2000 27 211 3.6E-6 T 15-10-2018 Trad_2896 eb8caae942dae3c6c3a5a56ba2b7a69d 401 SUPERFAMILY SSF53756 102 396 2.15E-28 T 15-10-2018 Trad_2896 eb8caae942dae3c6c3a5a56ba2b7a69d 401 Pfam PF06925 Monogalactosyldiacylglycerol (MGDG) synthase 37 201 6.1E-24 T 15-10-2018 IPR009695 Diacylglycerol glucosyltransferase, N-terminal GO:0009247|GO:0016758 Trad_2071 00b28957e656bdcd549be93f880a3411 204 ProSitePatterns PS00603 Thymidine kinase cellular-type signature. 175 188 - T 15-10-2018 IPR020633 Thymidine kinase, conserved site GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 Trad_2071 00b28957e656bdcd549be93f880a3411 204 Gene3D G3DSA:3.40.50.300 3 142 1.4E-50 T 15-10-2018 Trad_2071 00b28957e656bdcd549be93f880a3411 204 SUPERFAMILY SSF57716 143 195 2.19E-16 T 15-10-2018 Trad_2071 00b28957e656bdcd549be93f880a3411 204 SUPERFAMILY SSF52540 9 143 1.38E-38 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_2071 00b28957e656bdcd549be93f880a3411 204 PIRSF PIRSF035805 7 198 3.5E-59 T 15-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 Trad_2071 00b28957e656bdcd549be93f880a3411 204 Hamap MF_00124 Thymidine kinase [tdk]. 8 191 34.393 T 15-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 Trad_2071 00b28957e656bdcd549be93f880a3411 204 Pfam PF00265 Thymidine kinase 9 188 1.8E-52 T 15-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 Trad_2071 00b28957e656bdcd549be93f880a3411 204 Gene3D G3DSA:3.30.60.20 143 202 8.2E-25 T 15-10-2018 Trad_2163 dc29b8b987fe2b18ffbb142798134252 179 SUPERFAMILY SSF46689 4 80 1.35E-17 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Trad_2163 dc29b8b987fe2b18ffbb142798134252 179 Gene3D G3DSA:1.10.357.10 4 179 2.3E-47 T 15-10-2018 Trad_2163 dc29b8b987fe2b18ffbb142798134252 179 SUPERFAMILY SSF48498 101 177 4.15E-12 T 15-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Trad_2163 dc29b8b987fe2b18ffbb142798134252 179 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 2.0E-8 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Trad_2163 dc29b8b987fe2b18ffbb142798134252 179 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 2.0E-8 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Trad_2163 dc29b8b987fe2b18ffbb142798134252 179 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 55 7.8E-14 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Trad_1846 8a8f6ade8d98b583711f391a80cc572f 341 Gene3D G3DSA:3.40.50.720 5 318 3.8E-95 T 15-10-2018 Trad_1846 8a8f6ade8d98b583711f391a80cc572f 341 SUPERFAMILY SSF51735 5 151 6.62E-47 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_1846 8a8f6ade8d98b583711f391a80cc572f 341 Gene3D G3DSA:3.30.360.10 130 336 3.8E-95 T 15-10-2018 Trad_1846 8a8f6ade8d98b583711f391a80cc572f 341 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 134 233 9.8E-9 T 15-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 Trad_1846 8a8f6ade8d98b583711f391a80cc572f 341 SUPERFAMILY SSF55347 128 260 4.06E-35 T 15-10-2018 Trad_1846 8a8f6ade8d98b583711f391a80cc572f 341 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 6 120 6.7E-27 T 15-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 Trad_2004 c1ebad70606c5d252b47f1f480ce1345 567 ProSitePatterns PS00690 DEAH-box subfamily ATP-dependent helicases signature. 141 150 - T 15-10-2018 IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site Trad_2004 c1ebad70606c5d252b47f1f480ce1345 567 Gene3D G3DSA:3.40.50.300 7 209 1.5E-72 T 15-10-2018 Trad_2004 c1ebad70606c5d252b47f1f480ce1345 567 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 20 353 8.5E-114 T 15-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 Trad_2004 c1ebad70606c5d252b47f1f480ce1345 567 SUPERFAMILY SSF52540 68 350 8.65E-55 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_2004 c1ebad70606c5d252b47f1f480ce1345 567 Pfam PF00270 DEAD/DEAH box helicase 30 187 2.3E-20 T 15-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Trad_2004 c1ebad70606c5d252b47f1f480ce1345 567 SMART SM00490 252 333 4.6E-25 T 15-10-2018 IPR001650 Helicase, C-terminal Trad_2004 c1ebad70606c5d252b47f1f480ce1345 567 Pfam PF00271 Helicase conserved C-terminal domain 231 332 1.6E-15 T 15-10-2018 IPR001650 Helicase, C-terminal Trad_2004 c1ebad70606c5d252b47f1f480ce1345 567 SMART SM00487 24 218 1.5E-32 T 15-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Trad_2004 c1ebad70606c5d252b47f1f480ce1345 567 Pfam PF16124 RecQ zinc-binding 450 491 5.9E-7 T 15-10-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain Trad_0311 71868dbf7bd5bcd54b7e3edcbd4fd290 407 Pfam PF02684 Lipid-A-disaccharide synthetase 263 301 2.1E-5 T 15-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 Trad_0311 71868dbf7bd5bcd54b7e3edcbd4fd290 407 SUPERFAMILY SSF53756 128 405 1.36E-11 T 15-10-2018 Trad_1464 9f0c0896e83638d5b7c23effb7baa005 117 Pfam PF02152 Dihydroneopterin aldolase 4 112 1.9E-28 T 15-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 Trad_1464 9f0c0896e83638d5b7c23effb7baa005 117 SUPERFAMILY SSF55620 2 116 2.18E-31 T 15-10-2018 Trad_1464 9f0c0896e83638d5b7c23effb7baa005 117 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 2 114 1.5E-32 T 15-10-2018 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 Trad_1464 9f0c0896e83638d5b7c23effb7baa005 117 Gene3D G3DSA:3.30.1130.10 1 117 3.7E-35 T 15-10-2018 Trad_1464 9f0c0896e83638d5b7c23effb7baa005 117 SMART SM00905 4 114 2.3E-40 T 15-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 Trad_1464 9f0c0896e83638d5b7c23effb7baa005 117 TIGRFAM TIGR00526 folB_dom: FolB domain 2 116 2.8E-22 T 15-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 Trad_1961 743917bf2a1593cda25b5b7ff174df7e 926 Pfam PF13246 Cation transport ATPase (P-type) 397 485 9.5E-23 T 15-10-2018 Trad_1961 743917bf2a1593cda25b5b7ff174df7e 926 Gene3D G3DSA:1.20.1110.10 65 917 0.0 T 15-10-2018 Trad_1961 743917bf2a1593cda25b5b7ff174df7e 926 SUPERFAMILY SSF81653 124 234 8.5E-27 T 15-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 Trad_1961 743917bf2a1593cda25b5b7ff174df7e 926 SMART SM00831 14 87 1.6E-15 T 15-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 Trad_1961 743917bf2a1593cda25b5b7ff174df7e 926 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 338 344 - T 15-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 Trad_1961 743917bf2a1593cda25b5b7ff174df7e 926 Gene3D G3DSA:3.40.1110.10 346 550 0.0 T 15-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 Trad_1961 743917bf2a1593cda25b5b7ff174df7e 926 Gene3D G3DSA:3.40.50.1000 333 691 0.0 T 15-10-2018 IPR023214 HAD superfamily Trad_1961 743917bf2a1593cda25b5b7ff174df7e 926 SUPERFAMILY SSF81665 14 923 1.7E-113 T 15-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 Trad_1961 743917bf2a1593cda25b5b7ff174df7e 926 Gene3D G3DSA:2.70.150.10 31 238 0.0 T 15-10-2018 Trad_1961 743917bf2a1593cda25b5b7ff174df7e 926 SUPERFAMILY SSF81660 343 547 1.39E-59 T 15-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 Trad_1961 743917bf2a1593cda25b5b7ff174df7e 926 Pfam PF08282 haloacid dehalogenase-like hydrolase 633 690 3.5E-5 T 15-10-2018 Trad_1961 743917bf2a1593cda25b5b7ff174df7e 926 Pfam PF00690 Cation transporter/ATPase, N-terminus 17 81 8.8E-16 T 15-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 Trad_1961 743917bf2a1593cda25b5b7ff174df7e 926 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 678 703 6.8E-22 T 15-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Trad_1961 743917bf2a1593cda25b5b7ff174df7e 926 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 618 634 6.8E-22 T 15-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Trad_1961 743917bf2a1593cda25b5b7ff174df7e 926 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 646 662 6.8E-22 T 15-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Trad_1961 743917bf2a1593cda25b5b7ff174df7e 926 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 502 520 6.8E-22 T 15-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Trad_1961 743917bf2a1593cda25b5b7ff174df7e 926 Pfam PF00689 Cation transporting ATPase, C-terminus 732 918 1.6E-50 T 15-10-2018 IPR006068 Cation-transporting P-type ATPase, C-terminal Reactome: R-HSA-936837 Trad_1961 743917bf2a1593cda25b5b7ff174df7e 926 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 172 186 4.4E-42 T 15-10-2018 Trad_1961 743917bf2a1593cda25b5b7ff174df7e 926 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 670 682 4.4E-42 T 15-10-2018 Trad_1961 743917bf2a1593cda25b5b7ff174df7e 926 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 565 575 4.4E-42 T 15-10-2018 Trad_1961 743917bf2a1593cda25b5b7ff174df7e 926 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 336 350 4.4E-42 T 15-10-2018 Trad_1961 743917bf2a1593cda25b5b7ff174df7e 926 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 543 554 4.4E-42 T 15-10-2018 Trad_1961 743917bf2a1593cda25b5b7ff174df7e 926 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 646 665 4.4E-42 T 15-10-2018 Trad_1961 743917bf2a1593cda25b5b7ff174df7e 926 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 94 358 2.1E-37 T 15-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Trad_1961 743917bf2a1593cda25b5b7ff174df7e 926 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 620 726 6.1E-34 T 15-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Trad_1961 743917bf2a1593cda25b5b7ff174df7e 926 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 445 589 4.9E-18 T 15-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Trad_1961 743917bf2a1593cda25b5b7ff174df7e 926 Pfam PF00122 E1-E2 ATPase 121 315 1.6E-44 T 15-10-2018 Trad_1961 743917bf2a1593cda25b5b7ff174df7e 926 SUPERFAMILY SSF56784 334 753 7.72E-62 T 15-10-2018 IPR036412 HAD-like superfamily Trad_0680 b0682d98f8e0be002105fb434c1b81b3 368 Pfam PF00557 Metallopeptidase family M24 150 352 3.5E-65 T 15-10-2018 IPR000994 Peptidase M24 Trad_0680 b0682d98f8e0be002105fb434c1b81b3 368 Gene3D G3DSA:3.40.350.10 7 133 9.2E-19 T 15-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal Trad_0680 b0682d98f8e0be002105fb434c1b81b3 368 SUPERFAMILY SSF55920 141 365 3.27E-73 T 15-10-2018 IPR036005 Creatinase/aminopeptidase-like Trad_0680 b0682d98f8e0be002105fb434c1b81b3 368 Pfam PF01321 Creatinase/Prolidase N-terminal domain 25 140 7.0E-12 T 15-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 Trad_0680 b0682d98f8e0be002105fb434c1b81b3 368 Gene3D G3DSA:3.90.230.10 142 366 1.3E-78 T 15-10-2018 Trad_0680 b0682d98f8e0be002105fb434c1b81b3 368 SUPERFAMILY SSF53092 10 139 4.71E-12 T 15-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal Trad_0680 b0682d98f8e0be002105fb434c1b81b3 368 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 297 309 - T 15-10-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site Trad_2135 638a5a3fc5ff4fdaa1b2e0baabb31af4 524 SUPERFAMILY SSF52096 233 524 1.2E-90 T 15-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Trad_2135 638a5a3fc5ff4fdaa1b2e0baabb31af4 524 Gene3D G3DSA:3.90.226.10 267 524 1.7E-92 T 15-10-2018 Trad_2135 638a5a3fc5ff4fdaa1b2e0baabb31af4 524 Pfam PF01039 Carboxyl transferase domain 37 522 1.3E-183 T 15-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 Trad_2135 638a5a3fc5ff4fdaa1b2e0baabb31af4 524 Gene3D G3DSA:3.90.226.10 10 266 1.5E-87 T 15-10-2018 Trad_2135 638a5a3fc5ff4fdaa1b2e0baabb31af4 524 SUPERFAMILY SSF52096 11 264 2.82E-74 T 15-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Trad_2898 f017aa6b242e5150d192988050c66a8f 1033 Gene3D G3DSA:3.30.70.270 574 754 6.2E-52 T 15-10-2018 Trad_2898 f017aa6b242e5150d192988050c66a8f 1033 SUPERFAMILY SSF55785 169 272 3.87E-15 T 15-10-2018 IPR035965 PAS domain superfamily Trad_2898 f017aa6b242e5150d192988050c66a8f 1033 SMART SM00091 294 361 6.0E-5 T 15-10-2018 IPR000014 PAS domain Trad_2898 f017aa6b242e5150d192988050c66a8f 1033 SMART SM00091 182 247 1.2E-6 T 15-10-2018 IPR000014 PAS domain Trad_2898 f017aa6b242e5150d192988050c66a8f 1033 Gene3D G3DSA:3.30.450.40 17 179 1.3E-19 T 15-10-2018 IPR029016 GAF-like domain superfamily Trad_2898 f017aa6b242e5150d192988050c66a8f 1033 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 295 413 2.1E-19 T 15-10-2018 IPR000014 PAS domain Trad_2898 f017aa6b242e5150d192988050c66a8f 1033 Pfam PF08448 PAS fold 188 288 1.0E-11 T 15-10-2018 IPR013656 PAS fold-4 Trad_2898 f017aa6b242e5150d192988050c66a8f 1033 SUPERFAMILY SSF55073 584 742 1.26E-40 T 15-10-2018 IPR029787 Nucleotide cyclase Trad_2898 f017aa6b242e5150d192988050c66a8f 1033 Pfam PF00563 EAL domain 757 1005 1.7E-72 T 15-10-2018 IPR001633 EAL domain Trad_2898 f017aa6b242e5150d192988050c66a8f 1033 Pfam PF01590 GAF domain 37 164 2.2E-10 T 15-10-2018 IPR003018 GAF domain GO:0005515 Trad_2898 f017aa6b242e5150d192988050c66a8f 1033 Gene3D G3DSA:3.30.450.40 422 573 1.3E-21 T 15-10-2018 IPR029016 GAF-like domain superfamily Trad_2898 f017aa6b242e5150d192988050c66a8f 1033 SUPERFAMILY SSF141868 756 1012 3.14E-87 T 15-10-2018 IPR035919 EAL domain superfamily Trad_2898 f017aa6b242e5150d192988050c66a8f 1033 SUPERFAMILY SSF55781 431 575 9.81E-22 T 15-10-2018 Trad_2898 f017aa6b242e5150d192988050c66a8f 1033 Gene3D G3DSA:3.30.450.20 180 285 7.9E-25 T 15-10-2018 Trad_2898 f017aa6b242e5150d192988050c66a8f 1033 Pfam PF13426 PAS domain 307 407 6.1E-15 T 15-10-2018 IPR000014 PAS domain Trad_2898 f017aa6b242e5150d192988050c66a8f 1033 Pfam PF13185 GAF domain 431 567 9.2E-12 T 15-10-2018 IPR003018 GAF domain GO:0005515 Trad_2898 f017aa6b242e5150d192988050c66a8f 1033 SMART SM00086 366 408 8.0E-6 T 15-10-2018 IPR001610 PAC motif Trad_2898 f017aa6b242e5150d192988050c66a8f 1033 SUPERFAMILY SSF55785 306 413 2.99E-24 T 15-10-2018 IPR035965 PAS domain superfamily Trad_2898 f017aa6b242e5150d192988050c66a8f 1033 Pfam PF00990 Diguanylate cyclase, GGDEF domain 579 735 4.6E-41 T 15-10-2018 IPR000160 GGDEF domain Trad_2898 f017aa6b242e5150d192988050c66a8f 1033 SMART SM00052 751 1010 4.0E-118 T 15-10-2018 IPR001633 EAL domain Trad_2898 f017aa6b242e5150d192988050c66a8f 1033 Gene3D G3DSA:3.30.450.20 294 421 8.7E-31 T 15-10-2018 Trad_2898 f017aa6b242e5150d192988050c66a8f 1033 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 577 739 8.7E-35 T 15-10-2018 IPR000160 GGDEF domain Trad_2898 f017aa6b242e5150d192988050c66a8f 1033 SUPERFAMILY SSF55781 37 179 3.49E-27 T 15-10-2018 Trad_2898 f017aa6b242e5150d192988050c66a8f 1033 Gene3D G3DSA:3.20.20.450 755 1014 6.2E-101 T 15-10-2018 IPR035919 EAL domain superfamily Trad_2898 f017aa6b242e5150d192988050c66a8f 1033 SMART SM00065 430 576 1.5E-12 T 15-10-2018 IPR003018 GAF domain GO:0005515 Trad_2898 f017aa6b242e5150d192988050c66a8f 1033 SMART SM00065 35 178 4.6E-11 T 15-10-2018 IPR003018 GAF domain GO:0005515 Trad_2898 f017aa6b242e5150d192988050c66a8f 1033 SMART SM00267 568 741 2.8E-56 T 15-10-2018 IPR000160 GGDEF domain Trad_1034 29add24d89351b2e7bd5ba750faede00 156 Gene3D G3DSA:1.10.455.10 6 156 2.4E-58 T 15-10-2018 IPR036823 Ribosomal protein S7 domain superfamily Trad_1034 29add24d89351b2e7bd5ba750faede00 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 1.3E-59 T 15-10-2018 IPR023798 Ribosomal protein S7 domain Trad_1034 29add24d89351b2e7bd5ba750faede00 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 33.47 T 15-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 Trad_1034 29add24d89351b2e7bd5ba750faede00 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 1.1E-59 T 15-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 Trad_1034 29add24d89351b2e7bd5ba750faede00 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 15-10-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Trad_1034 29add24d89351b2e7bd5ba750faede00 156 PIRSF PIRSF002122 4 156 1.7E-57 T 15-10-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 Trad_1034 29add24d89351b2e7bd5ba750faede00 156 SUPERFAMILY SSF47973 4 149 1.12E-54 T 15-10-2018 IPR036823 Ribosomal protein S7 domain superfamily Trad_0129 733f6ddf7c3967e9d8382689a951a054 307 Gene3D G3DSA:3.40.50.10330 7 137 3.8E-19 T 15-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 Trad_0129 733f6ddf7c3967e9d8382689a951a054 307 Pfam PF00781 Diacylglycerol kinase catalytic domain 16 135 6.3E-22 T 15-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 Trad_0129 733f6ddf7c3967e9d8382689a951a054 307 Gene3D G3DSA:2.60.200.40 140 296 3.6E-35 T 15-10-2018 Trad_0129 733f6ddf7c3967e9d8382689a951a054 307 SMART SM00046 15 143 1.9E-4 T 15-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 Trad_0129 733f6ddf7c3967e9d8382689a951a054 307 SUPERFAMILY SSF111331 15 305 2.14E-59 T 15-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily Trad_0504 4d4bfe0728c04fbf725d83d0cf1756f0 257 Gene3D G3DSA:3.40.50.150 6 253 1.4E-39 T 15-10-2018 Trad_0504 4d4bfe0728c04fbf725d83d0cf1756f0 257 Pfam PF08241 Methyltransferase domain 60 155 2.0E-13 T 15-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 Trad_0504 4d4bfe0728c04fbf725d83d0cf1756f0 257 SUPERFAMILY SSF53335 20 242 1.45E-30 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Trad_2025 c91acf3f1ae0120e1bfb801a05af7ebc 678 Gene3D G3DSA:3.30.200.20 53 137 4.4E-26 T 15-10-2018 Trad_2025 c91acf3f1ae0120e1bfb801a05af7ebc 678 SMART SM00220 58 336 1.2E-53 T 15-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Trad_2025 c91acf3f1ae0120e1bfb801a05af7ebc 678 SUPERFAMILY SSF56112 57 329 3.91E-69 T 15-10-2018 IPR011009 Protein kinase-like domain superfamily Trad_2025 c91acf3f1ae0120e1bfb801a05af7ebc 678 Pfam PF00069 Protein kinase domain 58 326 1.2E-48 T 15-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Trad_2025 c91acf3f1ae0120e1bfb801a05af7ebc 678 Gene3D G3DSA:1.10.510.10 138 342 3.4E-44 T 15-10-2018 Trad_2025 c91acf3f1ae0120e1bfb801a05af7ebc 678 Pfam PF01436 NHL repeat 486 512 7.7E-5 T 15-10-2018 IPR001258 NHL repeat GO:0005515 Trad_2025 c91acf3f1ae0120e1bfb801a05af7ebc 678 SUPERFAMILY SSF101898 388 661 2.04E-24 T 15-10-2018 Trad_2025 c91acf3f1ae0120e1bfb801a05af7ebc 678 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 64 87 - T 15-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 Trad_2025 c91acf3f1ae0120e1bfb801a05af7ebc 678 Gene3D G3DSA:2.120.10.30 421 577 7.7E-23 T 15-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like Trad_2025 c91acf3f1ae0120e1bfb801a05af7ebc 678 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 178 190 - T 15-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 Trad_1042 c23e59747424aef2c45d862119ad3a79 90 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 15-10-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Trad_1042 c23e59747424aef2c45d862119ad3a79 90 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 1.4E-25 T 15-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Trad_1042 c23e59747424aef2c45d862119ad3a79 90 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 1.4E-25 T 15-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Trad_1042 c23e59747424aef2c45d862119ad3a79 90 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 1.4E-25 T 15-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Trad_1042 c23e59747424aef2c45d862119ad3a79 90 PIRSF PIRSF002144 1 90 9.7E-34 T 15-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Trad_1042 c23e59747424aef2c45d862119ad3a79 90 Pfam PF00203 Ribosomal protein S19 3 83 2.5E-38 T 15-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Trad_1042 c23e59747424aef2c45d862119ad3a79 90 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 26.38 T 15-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Trad_1042 c23e59747424aef2c45d862119ad3a79 90 Gene3D G3DSA:3.30.860.10 1 90 3.2E-41 T 15-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Trad_1042 c23e59747424aef2c45d862119ad3a79 90 SUPERFAMILY SSF54570 3 84 3.01E-36 T 15-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Trad_1042 c23e59747424aef2c45d862119ad3a79 90 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 88 2.5E-45 T 15-10-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 Trad_0074 b6e2c5e2d433d4e93d225f4f23c3748c 176 SMART SM00909 66 156 6.4E-15 T 15-10-2018 IPR019606 GerMN domain Trad_0074 b6e2c5e2d433d4e93d225f4f23c3748c 176 Pfam PF10646 Sporulation and spore germination 36 152 3.4E-14 T 15-10-2018 IPR019606 GerMN domain Trad_2659 664c8fb96d7dcb1ad53ee4352459edbb 891 Pfam PF01103 Surface antigen 537 891 2.6E-20 T 15-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 Trad_2659 664c8fb96d7dcb1ad53ee4352459edbb 891 Pfam PF08479 POTRA domain, ShlB-type 216 289 4.7E-5 T 15-10-2018 IPR013686 Polypeptide-transport-associated, ShlB-type Trad_2659 664c8fb96d7dcb1ad53ee4352459edbb 891 Gene3D G3DSA:3.10.20.310 361 415 6.7E-8 T 15-10-2018 Trad_2659 664c8fb96d7dcb1ad53ee4352459edbb 891 Pfam PF07244 Surface antigen variable number repeat 362 412 3.4E-7 T 15-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 Trad_2659 664c8fb96d7dcb1ad53ee4352459edbb 891 Gene3D G3DSA:2.40.160.50 612 891 2.8E-16 T 15-10-2018 Trad_2659 664c8fb96d7dcb1ad53ee4352459edbb 891 Gene3D G3DSA:3.10.20.310 209 289 5.3E-5 T 15-10-2018 Trad_2659 664c8fb96d7dcb1ad53ee4352459edbb 891 Gene3D G3DSA:3.10.20.310 36 104 4.9E-8 T 15-10-2018 Trad_1610 95bfc41895935f38091fa6c86b286425 417 Pfam PF14450 Cell division protein FtsA 10 179 7.5E-9 T 15-10-2018 Trad_1610 95bfc41895935f38091fa6c86b286425 417 Gene3D G3DSA:3.30.420.40 197 351 2.1E-108 T 15-10-2018 Trad_1610 95bfc41895935f38091fa6c86b286425 417 Gene3D G3DSA:3.90.640.10 235 298 2.1E-108 T 15-10-2018 Trad_1610 95bfc41895935f38091fa6c86b286425 417 PIRSF PIRSF003101 2 417 3.8E-135 T 15-10-2018 IPR020823 Cell division protein FtsA Trad_1610 95bfc41895935f38091fa6c86b286425 417 Gene3D G3DSA:3.30.420.40 12 371 2.1E-108 T 15-10-2018 Trad_1610 95bfc41895935f38091fa6c86b286425 417 Gene3D G3DSA:3.30.1490.110 86 169 2.1E-108 T 15-10-2018 Trad_1610 95bfc41895935f38091fa6c86b286425 417 Hamap MF_02033 Cell division protein FtsA [ftsA]. 5 417 29.315 T 15-10-2018 IPR020823 Cell division protein FtsA Trad_1610 95bfc41895935f38091fa6c86b286425 417 SMART SM00842 9 196 8.5E-91 T 15-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 Trad_1610 95bfc41895935f38091fa6c86b286425 417 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 8 377 2.7E-119 T 15-10-2018 IPR020823 Cell division protein FtsA Trad_1610 95bfc41895935f38091fa6c86b286425 417 Pfam PF14450 Cell division protein FtsA 207 373 4.4E-24 T 15-10-2018 Trad_1610 95bfc41895935f38091fa6c86b286425 417 Pfam PF02491 SHS2 domain inserted in FTSA 84 161 2.0E-29 T 15-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 Trad_1610 95bfc41895935f38091fa6c86b286425 417 SUPERFAMILY SSF53067 200 376 6.92E-41 T 15-10-2018 Trad_1610 95bfc41895935f38091fa6c86b286425 417 SUPERFAMILY SSF53067 8 197 3.89E-54 T 15-10-2018 Trad_2263 702a3e668f20eef4c5f175ec01c52a2e 525 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 16 525 51.555 T 15-10-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 Trad_2263 702a3e668f20eef4c5f175ec01c52a2e 525 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 19 199 6.8E-65 T 15-10-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 Trad_2263 702a3e668f20eef4c5f175ec01c52a2e 525 Gene3D G3DSA:3.30.300.10 406 525 4.9E-52 T 15-10-2018 Trad_2263 702a3e668f20eef4c5f175ec01c52a2e 525 SUPERFAMILY SSF52317 19 236 7.25E-55 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like Trad_2263 702a3e668f20eef4c5f175ec01c52a2e 525 Gene3D G3DSA:3.40.50.620 208 405 6.9E-70 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Trad_2263 702a3e668f20eef4c5f175ec01c52a2e 525 SUPERFAMILY SSF54810 405 525 6.02E-50 T 15-10-2018 Trad_2263 702a3e668f20eef4c5f175ec01c52a2e 525 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 212 525 4.3E-137 T 15-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 Trad_2263 702a3e668f20eef4c5f175ec01c52a2e 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 90 101 1.7E-6 T 15-10-2018 Trad_2263 702a3e668f20eef4c5f175ec01c52a2e 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 177 190 1.7E-6 T 15-10-2018 Trad_2263 702a3e668f20eef4c5f175ec01c52a2e 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 63 72 1.7E-6 T 15-10-2018 Trad_2263 702a3e668f20eef4c5f175ec01c52a2e 525 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 60 74 2.5E-5 T 15-10-2018 Trad_2263 702a3e668f20eef4c5f175ec01c52a2e 525 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 19 33 2.5E-5 T 15-10-2018 Trad_2263 702a3e668f20eef4c5f175ec01c52a2e 525 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 90 106 2.5E-5 T 15-10-2018 Trad_2263 702a3e668f20eef4c5f175ec01c52a2e 525 SUPERFAMILY SSF52402 201 446 1.59E-47 T 15-10-2018 Trad_2263 702a3e668f20eef4c5f175ec01c52a2e 525 Pfam PF00117 Glutamine amidotransferase class-I 20 199 3.4E-38 T 15-10-2018 IPR017926 Glutamine amidotransferase Trad_2263 702a3e668f20eef4c5f175ec01c52a2e 525 Pfam PF00958 GMP synthase C terminal domain 435 524 2.8E-42 T 15-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 Trad_2263 702a3e668f20eef4c5f175ec01c52a2e 525 Gene3D G3DSA:3.40.50.880 13 201 1.1E-54 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like Trad_1754 f7a06a673a16d37631c30203ddc78b91 154 Gene3D G3DSA:3.30.460.40 2 150 6.4E-16 T 15-10-2018 Trad_1754 f7a06a673a16d37631c30203ddc78b91 154 SUPERFAMILY SSF81301 5 149 1.9E-22 T 15-10-2018 Trad_2868 524034861450188f4bca45317799bf4d 197 SUPERFAMILY SSF51182 39 179 1.93E-33 T 15-10-2018 IPR011051 RmlC-like cupin domain superfamily Trad_2868 524034861450188f4bca45317799bf4d 197 Gene3D G3DSA:2.60.120.10 27 193 7.8E-38 T 15-10-2018 IPR014710 RmlC-like jelly roll fold Trad_2868 524034861450188f4bca45317799bf4d 197 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 40 176 2.2E-24 T 15-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 Trad_2868 524034861450188f4bca45317799bf4d 197 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 42 185 1.0E-17 T 15-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 Trad_0019 4e96a52607de0e1fc3a9ff08746d1d38 924 SUPERFAMILY SSF52980 750 885 3.97E-10 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 Trad_0019 4e96a52607de0e1fc3a9ff08746d1d38 924 Pfam PF12705 PD-(D/E)XK nuclease superfamily 751 897 1.3E-7 T 15-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type Trad_0019 4e96a52607de0e1fc3a9ff08746d1d38 924 Gene3D G3DSA:3.40.50.300 184 316 3.0E-22 T 15-10-2018 Trad_0019 4e96a52607de0e1fc3a9ff08746d1d38 924 Gene3D G3DSA:3.40.50.300 3 144 1.1E-18 T 15-10-2018 Trad_0019 4e96a52607de0e1fc3a9ff08746d1d38 924 Pfam PF13361 UvrD-like helicase C-terminal domain 545 644 5.8E-13 T 15-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 Trad_0019 4e96a52607de0e1fc3a9ff08746d1d38 924 Gene3D G3DSA:3.40.50.300 535 656 4.3E-18 T 15-10-2018 Trad_0019 4e96a52607de0e1fc3a9ff08746d1d38 924 Gene3D G3DSA:3.90.320.10 751 901 1.9E-7 T 15-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal Trad_0019 4e96a52607de0e1fc3a9ff08746d1d38 924 Pfam PF00580 UvrD/REP helicase N-terminal domain 5 280 1.3E-37 T 15-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 Trad_0019 4e96a52607de0e1fc3a9ff08746d1d38 924 Gene3D G3DSA:3.40.50.300 361 452 4.5E-13 T 15-10-2018 Trad_0019 4e96a52607de0e1fc3a9ff08746d1d38 924 SUPERFAMILY SSF52540 6 648 2.6E-73 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_1612 b324792946c0a819803549b705711e81 172 SUPERFAMILY SSF55811 18 152 2.03E-35 T 15-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Trad_1612 b324792946c0a819803549b705711e81 172 PRINTS PR00502 NUDIX hydrolase family signature 59 73 8.7E-7 T 15-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Trad_1612 b324792946c0a819803549b705711e81 172 PRINTS PR00502 NUDIX hydrolase family signature 73 88 8.7E-7 T 15-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Trad_1612 b324792946c0a819803549b705711e81 172 Gene3D G3DSA:3.90.79.10 1 162 1.9E-44 T 15-10-2018 Trad_1612 b324792946c0a819803549b705711e81 172 ProSitePatterns PS00893 Nudix box signature. 64 85 - T 15-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 Trad_1612 b324792946c0a819803549b705711e81 172 Pfam PF00293 NUDIX domain 27 139 2.1E-19 T 15-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Trad_2516 87158e42de8198473efbf72f287790e3 504 SUPERFAMILY SSF53067 4 254 6.22E-90 T 15-10-2018 Trad_2516 87158e42de8198473efbf72f287790e3 504 Gene3D G3DSA:3.30.420.40 253 502 3.6E-94 T 15-10-2018 Trad_2516 87158e42de8198473efbf72f287790e3 504 Gene3D G3DSA:3.30.420.40 2 252 3.5E-107 T 15-10-2018 Trad_2516 87158e42de8198473efbf72f287790e3 504 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 4 496 5.7E-224 T 15-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 Trad_2516 87158e42de8198473efbf72f287790e3 504 Hamap MF_00186 Glycerol kinase [glpK]. 2 497 55.985 T 15-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 Trad_2516 87158e42de8198473efbf72f287790e3 504 SUPERFAMILY SSF53067 254 497 1.18E-84 T 15-10-2018 Trad_2516 87158e42de8198473efbf72f287790e3 504 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 6 251 6.3E-78 T 15-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 Trad_2516 87158e42de8198473efbf72f287790e3 504 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 134 146 - T 15-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 Trad_2516 87158e42de8198473efbf72f287790e3 504 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 261 450 1.2E-66 T 15-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 Trad_2516 87158e42de8198473efbf72f287790e3 504 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 362 382 - T 15-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 Trad_2516 87158e42de8198473efbf72f287790e3 504 PIRSF PIRSF000538 2 502 4.5E-170 T 15-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 Trad_0293 efd369f7f234759f7624216f1950fb4f 246 Gene3D G3DSA:3.40.1210.10 1 239 3.3E-81 T 15-10-2018 IPR036523 SurE-like phosphatase/nucleotidase superfamily GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 Trad_0293 efd369f7f234759f7624216f1950fb4f 246 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 1 244 31.258 T 15-10-2018 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 Trad_0293 efd369f7f234759f7624216f1950fb4f 246 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 1 227 1.6E-55 T 15-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 Trad_0293 efd369f7f234759f7624216f1950fb4f 246 SUPERFAMILY SSF64167 1 236 9.42E-74 T 15-10-2018 Trad_0293 efd369f7f234759f7624216f1950fb4f 246 Pfam PF01975 Survival protein SurE 3 178 1.1E-50 T 15-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 Trad_1560 d610fe21d801f3cbf1e9c33230fd77f3 383 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 224 303 7.6E-11 T 15-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 Trad_1560 d610fe21d801f3cbf1e9c33230fd77f3 383 SUPERFAMILY SSF53756 93 352 1.03E-22 T 15-10-2018 Trad_1560 d610fe21d801f3cbf1e9c33230fd77f3 383 Gene3D G3DSA:3.40.50.2000 192 351 2.5E-25 T 15-10-2018 Trad_0899 7289bed8eb8820c0aab38f36addd589c 461 Gene3D G3DSA:3.50.50.60 5 328 2.6E-120 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Trad_0899 7289bed8eb8820c0aab38f36addd589c 461 SUPERFAMILY SSF51905 3 362 8.94E-65 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Trad_0899 7289bed8eb8820c0aab38f36addd589c 461 Gene3D G3DSA:3.50.50.60 154 272 2.6E-120 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Trad_0899 7289bed8eb8820c0aab38f36addd589c 461 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 323 5.8E-74 T 15-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Trad_0899 7289bed8eb8820c0aab38f36addd589c 461 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 2.4E-43 T 15-10-2018 Trad_0899 7289bed8eb8820c0aab38f36addd589c 461 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 136 154 2.4E-43 T 15-10-2018 Trad_0899 7289bed8eb8820c0aab38f36addd589c 461 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 259 275 2.4E-43 T 15-10-2018 Trad_0899 7289bed8eb8820c0aab38f36addd589c 461 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 175 193 2.4E-43 T 15-10-2018 Trad_0899 7289bed8eb8820c0aab38f36addd589c 461 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 288 310 2.4E-43 T 15-10-2018 Trad_0899 7289bed8eb8820c0aab38f36addd589c 461 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 2.7E-81 T 15-10-2018 Trad_0899 7289bed8eb8820c0aab38f36addd589c 461 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 403 418 2.7E-81 T 15-10-2018 Trad_0899 7289bed8eb8820c0aab38f36addd589c 461 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 139 148 2.7E-81 T 15-10-2018 Trad_0899 7289bed8eb8820c0aab38f36addd589c 461 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 175 200 2.7E-81 T 15-10-2018 Trad_0899 7289bed8eb8820c0aab38f36addd589c 461 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 303 310 2.7E-81 T 15-10-2018 Trad_0899 7289bed8eb8820c0aab38f36addd589c 461 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 425 445 2.7E-81 T 15-10-2018 Trad_0899 7289bed8eb8820c0aab38f36addd589c 461 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 2.7E-81 T 15-10-2018 Trad_0899 7289bed8eb8820c0aab38f36addd589c 461 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 338 359 2.7E-81 T 15-10-2018 Trad_0899 7289bed8eb8820c0aab38f36addd589c 461 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 260 274 2.7E-81 T 15-10-2018 Trad_0899 7289bed8eb8820c0aab38f36addd589c 461 Gene3D G3DSA:3.30.390.30 341 461 8.3E-46 T 15-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Trad_0899 7289bed8eb8820c0aab38f36addd589c 461 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 4 461 8.8E-172 T 15-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 Trad_0899 7289bed8eb8820c0aab38f36addd589c 461 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 342 451 5.5E-38 T 15-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 Trad_0899 7289bed8eb8820c0aab38f36addd589c 461 PIRSF PIRSF000350 1 458 1.7E-93 T 15-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 Trad_0899 7289bed8eb8820c0aab38f36addd589c 461 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 15-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 Trad_0899 7289bed8eb8820c0aab38f36addd589c 461 SUPERFAMILY SSF55424 339 460 1.72E-42 T 15-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Trad_2372 0fc28ddaa9cf61b347b660586bef3c3b 397 Gene3D G3DSA:3.40.50.300 173 318 3.4E-9 T 15-10-2018 Trad_2372 0fc28ddaa9cf61b347b660586bef3c3b 397 SUPERFAMILY SSF52540 178 394 1.44E-22 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_2372 0fc28ddaa9cf61b347b660586bef3c3b 397 Pfam PF05673 Protein of unknown function (DUF815) 154 393 2.1E-74 T 15-10-2018 IPR008533 Domain of unknown function DUF815 Trad_2593 26f936de8a8bb3399be0931b60d6a03e 372 Pfam PF03054 tRNA methyl transferase 20 367 3.9E-114 T 15-10-2018 Trad_2593 26f936de8a8bb3399be0931b60d6a03e 372 SUPERFAMILY SSF52402 18 260 1.43E-49 T 15-10-2018 Trad_2593 26f936de8a8bb3399be0931b60d6a03e 372 Gene3D G3DSA:3.40.50.620 7 226 1.7E-76 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Trad_2593 26f936de8a8bb3399be0931b60d6a03e 372 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 19 368 37.787 T 15-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 Trad_2593 26f936de8a8bb3399be0931b60d6a03e 372 Gene3D G3DSA:2.30.30.280 227 291 3.6E-14 T 15-10-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 Trad_2593 26f936de8a8bb3399be0931b60d6a03e 372 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 20 367 2.8E-101 T 15-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 Trad_2593 26f936de8a8bb3399be0931b60d6a03e 372 Gene3D G3DSA:2.40.30.10 292 371 3.4E-20 T 15-10-2018 Trad_0003 a73f758b0206d66d7987e42f2caa6f8b 422 Pfam PF03952 Enolase, N-terminal domain 4 133 2.1E-53 T 15-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Trad_0003 a73f758b0206d66d7987e42f2caa6f8b 422 PRINTS PR00148 Enolase signature 160 173 4.2E-44 T 15-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Trad_0003 a73f758b0206d66d7987e42f2caa6f8b 422 PRINTS PR00148 Enolase signature 37 51 4.2E-44 T 15-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Trad_0003 a73f758b0206d66d7987e42f2caa6f8b 422 PRINTS PR00148 Enolase signature 362 379 4.2E-44 T 15-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Trad_0003 a73f758b0206d66d7987e42f2caa6f8b 422 PRINTS PR00148 Enolase signature 106 122 4.2E-44 T 15-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Trad_0003 a73f758b0206d66d7987e42f2caa6f8b 422 PRINTS PR00148 Enolase signature 310 321 4.2E-44 T 15-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Trad_0003 a73f758b0206d66d7987e42f2caa6f8b 422 PRINTS PR00148 Enolase signature 333 347 4.2E-44 T 15-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Trad_0003 a73f758b0206d66d7987e42f2caa6f8b 422 Gene3D G3DSA:3.30.390.10 1 125 3.3E-49 T 15-10-2018 IPR029017 Enolase-like, N-terminal Trad_0003 a73f758b0206d66d7987e42f2caa6f8b 422 SMART SM01192 138 422 8.5E-218 T 15-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Trad_0003 a73f758b0206d66d7987e42f2caa6f8b 422 SUPERFAMILY SSF54826 3 137 1.92E-50 T 15-10-2018 Trad_0003 a73f758b0206d66d7987e42f2caa6f8b 422 Gene3D G3DSA:3.20.20.120 128 422 1.5E-133 T 15-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Trad_0003 a73f758b0206d66d7987e42f2caa6f8b 422 Hamap MF_00318 Enolase [eno]. 2 410 44.508 T 15-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Trad_0003 a73f758b0206d66d7987e42f2caa6f8b 422 Pfam PF00113 Enolase, C-terminal TIM barrel domain 140 420 3.7E-127 T 15-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Trad_0003 a73f758b0206d66d7987e42f2caa6f8b 422 PIRSF PIRSF001400 1 422 1.2E-185 T 15-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Trad_0003 a73f758b0206d66d7987e42f2caa6f8b 422 SMART SM01193 4 133 3.3E-79 T 15-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Trad_0003 a73f758b0206d66d7987e42f2caa6f8b 422 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 422 1.7E-201 T 15-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Trad_0003 a73f758b0206d66d7987e42f2caa6f8b 422 SUPERFAMILY SSF51604 138 421 2.31E-126 T 15-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Trad_0003 a73f758b0206d66d7987e42f2caa6f8b 422 ProSitePatterns PS00164 Enolase signature. 333 346 - T 15-10-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Trad_1974 0405b2669056e6e0bd8bee295cb50269 618 SUPERFAMILY SSF82771 12 94 1.31E-18 T 15-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 Trad_1974 0405b2669056e6e0bd8bee295cb50269 618 SMART SM00465 12 92 4.6E-23 T 15-10-2018 IPR000305 GIY-YIG endonuclease Trad_1974 0405b2669056e6e0bd8bee295cb50269 618 SMART SM00278 539 558 15.0 T 15-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Trad_1974 0405b2669056e6e0bd8bee295cb50269 618 SMART SM00278 571 590 0.34 T 15-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Trad_1974 0405b2669056e6e0bd8bee295cb50269 618 Pfam PF14520 Helix-hairpin-helix domain 541 588 4.4E-10 T 15-10-2018 Trad_1974 0405b2669056e6e0bd8bee295cb50269 618 Gene3D G3DSA:3.30.420.340 372 531 3.2E-50 T 15-10-2018 IPR038476 UvrC homology region 2 superfamily Trad_1974 0405b2669056e6e0bd8bee295cb50269 618 SUPERFAMILY SSF47781 502 592 8.26E-19 T 15-10-2018 IPR010994 RuvA domain 2-like Trad_1974 0405b2669056e6e0bd8bee295cb50269 618 Gene3D G3DSA:1.10.150.20 532 590 1.2E-20 T 15-10-2018 Trad_1974 0405b2669056e6e0bd8bee295cb50269 618 SUPERFAMILY SSF46600 184 232 3.53E-10 T 15-10-2018 IPR036876 UVR domain superfamily Trad_1974 0405b2669056e6e0bd8bee295cb50269 618 Gene3D G3DSA:3.40.1440.10 2 96 5.9E-32 T 15-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 Trad_1974 0405b2669056e6e0bd8bee295cb50269 618 Pfam PF01541 GIY-YIG catalytic domain 13 87 2.3E-8 T 15-10-2018 IPR000305 GIY-YIG endonuclease Trad_1974 0405b2669056e6e0bd8bee295cb50269 618 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 5 572 1.1E-168 T 15-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 Trad_1974 0405b2669056e6e0bd8bee295cb50269 618 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 378 525 5.8E-47 T 15-10-2018 IPR001162 UvrC family homology region Trad_1974 0405b2669056e6e0bd8bee295cb50269 618 Pfam PF02151 UvrB/uvrC motif 201 231 9.9E-7 T 15-10-2018 IPR001943 UVR domain GO:0005515 Trad_1974 0405b2669056e6e0bd8bee295cb50269 618 Hamap MF_00203 UvrABC system protein C [uvrC]. 1 590 26.598 T 15-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 Trad_0538 85576619b25809e82ddcf27ef303d397 169 SUPERFAMILY SSF52949 2 163 2.69E-63 T 15-10-2018 Trad_0538 85576619b25809e82ddcf27ef303d397 169 Pfam PF01661 Macro domain 17 129 1.1E-44 T 15-10-2018 IPR002589 Macro domain Trad_0538 85576619b25809e82ddcf27ef303d397 169 SMART SM00506 1 129 3.8E-53 T 15-10-2018 IPR002589 Macro domain Trad_0538 85576619b25809e82ddcf27ef303d397 169 Gene3D G3DSA:3.40.220.10 1 168 4.3E-72 T 15-10-2018 Trad_0940 972c0ff076f34ae36e36c3686a0f02c3 401 TIGRFAM TIGR03858 LLM_2I7G: probable oxidoreductase, LLM family 51 388 6.0E-153 T 15-10-2018 IPR022290 Conserved hypothetical protein CHP03858, luciferase-like monooxygenase, putative Trad_0940 972c0ff076f34ae36e36c3686a0f02c3 401 Pfam PF00296 Luciferase-like monooxygenase 69 347 3.7E-47 T 15-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 Trad_0940 972c0ff076f34ae36e36c3686a0f02c3 401 SUPERFAMILY SSF51679 51 389 2.71E-79 T 15-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Trad_0940 972c0ff076f34ae36e36c3686a0f02c3 401 Gene3D G3DSA:3.20.20.30 41 398 3.3E-89 T 15-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Trad_2820 bf3ef557a4a4f8577c22023794788171 74 SUPERFAMILY SSF47598 2 50 2.0E-8 T 15-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 Trad_1121 2bed4c612e070d25d49962bb6d72c1cf 312 Pfam PF13487 HD domain 198 255 5.9E-15 T 15-10-2018 Trad_1121 2bed4c612e070d25d49962bb6d72c1cf 312 Gene3D G3DSA:1.10.3210.10 129 312 1.4E-60 T 15-10-2018 Trad_1121 2bed4c612e070d25d49962bb6d72c1cf 312 SMART SM00471 142 276 2.7E-8 T 15-10-2018 IPR003607 HD/PDEase domain Trad_1121 2bed4c612e070d25d49962bb6d72c1cf 312 SUPERFAMILY SSF109604 135 307 1.92E-33 T 15-10-2018 Trad_1121 2bed4c612e070d25d49962bb6d72c1cf 312 SUPERFAMILY SSF51182 35 125 1.63E-5 T 15-10-2018 IPR011051 RmlC-like cupin domain superfamily Trad_2149 6da18f25e6b749daca08c2ad4e94cf35 360 Gene3D G3DSA:3.40.50.300 49 284 2.8E-79 T 15-10-2018 Trad_2149 6da18f25e6b749daca08c2ad4e94cf35 360 PRINTS PR00142 RecA protein signature 227 255 3.7E-83 T 15-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Trad_2149 6da18f25e6b749daca08c2ad4e94cf35 360 PRINTS PR00142 RecA protein signature 314 331 3.7E-83 T 15-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Trad_2149 6da18f25e6b749daca08c2ad4e94cf35 360 PRINTS PR00142 RecA protein signature 144 173 3.7E-83 T 15-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Trad_2149 6da18f25e6b749daca08c2ad4e94cf35 360 PRINTS PR00142 RecA protein signature 110 139 3.7E-83 T 15-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Trad_2149 6da18f25e6b749daca08c2ad4e94cf35 360 PRINTS PR00142 RecA protein signature 260 289 3.7E-83 T 15-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Trad_2149 6da18f25e6b749daca08c2ad4e94cf35 360 PRINTS PR00142 RecA protein signature 182 211 3.7E-83 T 15-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Trad_2149 6da18f25e6b749daca08c2ad4e94cf35 360 Pfam PF00154 recA bacterial DNA recombination protein 24 285 4.1E-140 T 15-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Trad_2149 6da18f25e6b749daca08c2ad4e94cf35 360 Hamap MF_00268 Protein RecA [recA]. 21 346 50.162 T 15-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Trad_2149 6da18f25e6b749daca08c2ad4e94cf35 360 ProSitePatterns PS00321 recA signature. 230 238 - T 15-10-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 Trad_2149 6da18f25e6b749daca08c2ad4e94cf35 360 SUPERFAMILY SSF52540 24 284 1.25E-58 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_2149 6da18f25e6b749daca08c2ad4e94cf35 360 SMART SM00382 74 245 5.0E-8 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_2149 6da18f25e6b749daca08c2ad4e94cf35 360 SUPERFAMILY SSF54752 286 341 5.36E-14 T 15-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal Trad_2149 6da18f25e6b749daca08c2ad4e94cf35 360 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 21 339 2.2E-163 T 15-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Trad_2149 6da18f25e6b749daca08c2ad4e94cf35 360 Gene3D G3DSA:3.30.250.10 285 344 3.0E-19 T 15-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal Trad_1444 30f83c3ad7ff0a17dc300cb50f1acd92 347 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 140 338 1.9E-17 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Trad_1444 30f83c3ad7ff0a17dc300cb50f1acd92 347 SUPERFAMILY SSF161098 118 336 7.59E-61 T 15-10-2018 IPR035906 MetI-like superfamily Trad_1444 30f83c3ad7ff0a17dc300cb50f1acd92 347 Gene3D G3DSA:1.10.3720.10 94 345 1.2E-69 T 15-10-2018 IPR035906 MetI-like superfamily Trad_0603 347616d12c8d85ecb39b165144ab439f 310 Pfam PF02653 Branched-chain amino acid transport system / permease component 11 291 3.7E-41 T 15-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Trad_0603 347616d12c8d85ecb39b165144ab439f 310 Gene3D G3DSA:1.10.3470.10 42 219 5.0E-6 T 15-10-2018 IPR037294 ABC transporter, BtuC-like Trad_2255 3d6edc02eefbc6e19377c36b286dff05 274 Gene3D G3DSA:1.10.3720.10 40 235 1.6E-25 T 15-10-2018 IPR035906 MetI-like superfamily Trad_2255 3d6edc02eefbc6e19377c36b286dff05 274 SUPERFAMILY SSF161098 43 224 2.49E-29 T 15-10-2018 IPR035906 MetI-like superfamily Trad_2255 3d6edc02eefbc6e19377c36b286dff05 274 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 64 235 1.3E-22 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Trad_0434 c99fe29b0858c4c6c26dc35801079ef4 440 Hamap MF_00973 Gluconeogenesis factor. 123 435 31.977 T 15-10-2018 IPR010119 Gluconeogenesis factor Trad_0434 c99fe29b0858c4c6c26dc35801079ef4 440 TIGRFAM TIGR01826 CofD_related: conserved hypothetical protein 127 431 1.0E-99 T 15-10-2018 IPR010119 Gluconeogenesis factor Trad_0434 c99fe29b0858c4c6c26dc35801079ef4 440 Pfam PF01933 Uncharacterised protein family UPF0052 127 411 1.7E-90 T 15-10-2018 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 Trad_0434 c99fe29b0858c4c6c26dc35801079ef4 440 SUPERFAMILY SSF142338 124 430 2.62E-88 T 15-10-2018 Trad_0434 c99fe29b0858c4c6c26dc35801079ef4 440 Gene3D G3DSA:3.40.50.12300 122 439 2.2E-106 T 15-10-2018 IPR038136 Gluconeogenesis factor superfamily Trad_2386 4cb18f7c28e6f5725c184a0a3b097017 119 Pfam PF03960 ArsC family 36 111 1.1E-8 T 15-10-2018 IPR006660 Arsenate reductase-like Trad_2386 4cb18f7c28e6f5725c184a0a3b097017 119 SUPERFAMILY SSF52833 2 112 3.68E-21 T 15-10-2018 IPR036249 Thioredoxin-like superfamily Trad_2386 4cb18f7c28e6f5725c184a0a3b097017 119 Gene3D G3DSA:3.40.30.10 1 113 4.6E-20 T 15-10-2018 Trad_1172 89ec622cdd8c43d2d6634e08c9978ed3 420 Pfam PF02687 FtsX-like permease family 305 413 5.8E-9 T 15-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Trad_1272 916273961a34747e5da98f9c757809b2 394 Pfam PF00082 Subtilase family 147 374 7.6E-34 T 15-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 Trad_1272 916273961a34747e5da98f9c757809b2 394 Gene3D G3DSA:3.40.50.200 116 393 1.9E-90 T 15-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Trad_1272 916273961a34747e5da98f9c757809b2 394 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 337 347 - T 15-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site Trad_1272 916273961a34747e5da98f9c757809b2 394 SUPERFAMILY SSF52743 117 386 9.43E-76 T 15-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Trad_1272 916273961a34747e5da98f9c757809b2 394 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 150 161 - T 15-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site Trad_1272 916273961a34747e5da98f9c757809b2 394 Gene3D G3DSA:3.30.70.80 30 113 9.8E-11 T 15-10-2018 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 Trad_1272 916273961a34747e5da98f9c757809b2 394 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 187 197 - T 15-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site Trad_1272 916273961a34747e5da98f9c757809b2 394 PRINTS PR00723 Subtilisin serine protease family (S8) signature 336 352 1.9E-18 T 15-10-2018 IPR015500 Peptidase S8, subtilisin-related Trad_1272 916273961a34747e5da98f9c757809b2 394 PRINTS PR00723 Subtilisin serine protease family (S8) signature 145 164 1.9E-18 T 15-10-2018 IPR015500 Peptidase S8, subtilisin-related Trad_1272 916273961a34747e5da98f9c757809b2 394 PRINTS PR00723 Subtilisin serine protease family (S8) signature 183 196 1.9E-18 T 15-10-2018 IPR015500 Peptidase S8, subtilisin-related Trad_1272 916273961a34747e5da98f9c757809b2 394 SUPERFAMILY SSF54897 36 114 2.21E-7 T 15-10-2018 Trad_1091 ad01c33b8c7c63e4ba88052bae3f7c46 414 PRINTS PR00407 Eukaryotic molybdopterin domain signature 322 336 4.6E-21 T 15-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 Trad_1091 ad01c33b8c7c63e4ba88052bae3f7c46 414 PRINTS PR00407 Eukaryotic molybdopterin domain signature 137 148 4.6E-21 T 15-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 Trad_1091 ad01c33b8c7c63e4ba88052bae3f7c46 414 PRINTS PR00407 Eukaryotic molybdopterin domain signature 336 348 4.6E-21 T 15-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 Trad_1091 ad01c33b8c7c63e4ba88052bae3f7c46 414 PRINTS PR00407 Eukaryotic molybdopterin domain signature 61 75 4.6E-21 T 15-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 Trad_1091 ad01c33b8c7c63e4ba88052bae3f7c46 414 PRINTS PR00407 Eukaryotic molybdopterin domain signature 82 98 4.6E-21 T 15-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 Trad_1091 ad01c33b8c7c63e4ba88052bae3f7c46 414 PRINTS PR00407 Eukaryotic molybdopterin domain signature 248 261 4.6E-21 T 15-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 Trad_1091 ad01c33b8c7c63e4ba88052bae3f7c46 414 PRINTS PR00407 Eukaryotic molybdopterin domain signature 215 231 4.6E-21 T 15-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 Trad_1091 ad01c33b8c7c63e4ba88052bae3f7c46 414 PRINTS PR00407 Eukaryotic molybdopterin domain signature 232 245 4.6E-21 T 15-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 Trad_1091 ad01c33b8c7c63e4ba88052bae3f7c46 414 PRINTS PR00407 Eukaryotic molybdopterin domain signature 163 178 4.6E-21 T 15-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 Trad_1091 ad01c33b8c7c63e4ba88052bae3f7c46 414 Gene3D G3DSA:2.60.40.650 299 414 1.5E-33 T 15-10-2018 Trad_1091 ad01c33b8c7c63e4ba88052bae3f7c46 414 SUPERFAMILY SSF56524 55 282 4.58E-55 T 15-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 Trad_1091 ad01c33b8c7c63e4ba88052bae3f7c46 414 Pfam PF03404 Mo-co oxidoreductase dimerisation domain 298 410 1.6E-12 T 15-10-2018 IPR005066 Moybdenum cofactor oxidoreductase, dimerisation GO:0016491|GO:0030151|GO:0055114 Reactome: R-HSA-1614517 Trad_1091 ad01c33b8c7c63e4ba88052bae3f7c46 414 SUPERFAMILY SSF81296 299 413 4.48E-30 T 15-10-2018 IPR014756 Immunoglobulin E-set Trad_1091 ad01c33b8c7c63e4ba88052bae3f7c46 414 Pfam PF00174 Oxidoreductase molybdopterin binding domain 108 269 1.3E-42 T 15-10-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 Trad_1091 ad01c33b8c7c63e4ba88052bae3f7c46 414 Gene3D G3DSA:3.90.420.10 41 292 2.1E-62 T 15-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 Trad_1618 7647807cd4564dbaf6085f43a22d8742 147 PIRSF PIRSF004681 1 139 3.3E-41 T 15-10-2018 IPR001602 Uncharacterised protein family UPF0047 Trad_1618 7647807cd4564dbaf6085f43a22d8742 147 TIGRFAM TIGR00149 TIGR00149_YjbQ: secondary thiamine-phosphate synthase enzyme 11 138 1.3E-38 T 15-10-2018 IPR001602 Uncharacterised protein family UPF0047 Trad_1618 7647807cd4564dbaf6085f43a22d8742 147 Gene3D G3DSA:2.60.120.460 2 139 3.1E-38 T 15-10-2018 IPR035917 YjbQ-like superfamily Trad_1618 7647807cd4564dbaf6085f43a22d8742 147 SUPERFAMILY SSF111038 1 139 5.1E-47 T 15-10-2018 IPR035917 YjbQ-like superfamily Trad_1618 7647807cd4564dbaf6085f43a22d8742 147 ProSitePatterns PS01314 Uncharacterized protein family UPF0047 signature. 100 118 - T 15-10-2018 IPR001602 Uncharacterised protein family UPF0047 Trad_1618 7647807cd4564dbaf6085f43a22d8742 147 Pfam PF01894 Uncharacterised protein family UPF0047 20 134 7.6E-35 T 15-10-2018 IPR001602 Uncharacterised protein family UPF0047 Trad_1626 58c838086af15d45df5338d7b8dda797 333 SUPERFAMILY SSF51430 8 328 8.9E-104 T 15-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Trad_1626 58c838086af15d45df5338d7b8dda797 333 Gene3D G3DSA:3.20.20.100 7 331 3.0E-122 T 15-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Trad_1626 58c838086af15d45df5338d7b8dda797 333 PRINTS PR00069 Aldo-keto reductase signature 53 77 7.8E-7 T 15-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Trad_1626 58c838086af15d45df5338d7b8dda797 333 PRINTS PR00069 Aldo-keto reductase signature 119 137 7.8E-7 T 15-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Trad_1626 58c838086af15d45df5338d7b8dda797 333 PRINTS PR00069 Aldo-keto reductase signature 176 193 7.8E-7 T 15-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Trad_1626 58c838086af15d45df5338d7b8dda797 333 PRINTS PR00069 Aldo-keto reductase signature 257 281 7.8E-7 T 15-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Trad_1626 58c838086af15d45df5338d7b8dda797 333 Pfam PF00248 Aldo/keto reductase family 21 322 1.6E-74 T 15-10-2018 IPR023210 NADP-dependent oxidoreductase domain Trad_1828 d6e3fc4fa453872416bb822824894a0a 292 SUPERFAMILY SSF161098 24 287 3.66E-53 T 15-10-2018 IPR035906 MetI-like superfamily Trad_1828 d6e3fc4fa453872416bb822824894a0a 292 Gene3D G3DSA:1.10.3720.10 22 281 1.2E-52 T 15-10-2018 IPR035906 MetI-like superfamily Trad_1828 d6e3fc4fa453872416bb822824894a0a 292 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 280 1.4E-12 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Trad_2662 dd6aea1a342fbf838ef9350bd0c2be81 158 TIGRFAM TIGR03544 DivI1A_domain: DivIVA domain 3 36 4.4E-10 T 15-10-2018 IPR019933 DivIVA domain Trad_2662 dd6aea1a342fbf838ef9350bd0c2be81 158 Pfam PF05103 DivIVA protein 3 133 6.9E-31 T 15-10-2018 IPR007793 DivIVA family Trad_1129 90191be9fc69a51b5a44b2822228348d 505 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 64 421 6.6E-95 T 15-10-2018 IPR000914 Solute-binding protein family 5 domain Trad_1129 90191be9fc69a51b5a44b2822228348d 505 SUPERFAMILY SSF53850 21 504 1.81E-141 T 15-10-2018 Trad_1129 90191be9fc69a51b5a44b2822228348d 505 PIRSF PIRSF002741 20 503 4.0E-111 T 15-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Trad_1129 90191be9fc69a51b5a44b2822228348d 505 Gene3D G3DSA:3.10.105.10 254 479 3.9E-154 T 15-10-2018 Trad_1129 90191be9fc69a51b5a44b2822228348d 505 Gene3D G3DSA:3.90.76.10 30 178 3.9E-154 T 15-10-2018 Trad_1129 90191be9fc69a51b5a44b2822228348d 505 Gene3D G3DSA:3.40.190.10 179 489 3.9E-154 T 15-10-2018 Trad_2672 a7fba13749815a2d8a60efaaa1f2a407 856 Gene3D G3DSA:1.20.1530.20 14 397 4.2E-64 T 15-10-2018 IPR038770 Sodium/solute symporter superfamily Trad_2672 a7fba13749815a2d8a60efaaa1f2a407 856 Pfam PF00582 Universal stress protein family 444 535 2.7E-8 T 15-10-2018 IPR006016 UspA Trad_2672 a7fba13749815a2d8a60efaaa1f2a407 856 SUPERFAMILY SSF52402 409 537 2.34E-10 T 15-10-2018 Trad_2672 a7fba13749815a2d8a60efaaa1f2a407 856 Pfam PF00999 Sodium/hydrogen exchanger family 24 389 1.3E-49 T 15-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 Trad_2672 a7fba13749815a2d8a60efaaa1f2a407 856 SUPERFAMILY SSF55804 681 822 1.83E-13 T 15-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 Trad_2672 a7fba13749815a2d8a60efaaa1f2a407 856 Gene3D G3DSA:3.40.50.620 410 537 4.0E-8 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Trad_2672 a7fba13749815a2d8a60efaaa1f2a407 856 Gene3D G3DSA:3.40.930.10 679 823 1.1E-13 T 15-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 Trad_2672 a7fba13749815a2d8a60efaaa1f2a407 856 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 682 822 1.2E-8 T 15-10-2018 IPR002178 PTS EIIA type-2 domain Trad_1955 d0f8b0363929a78ee9cdf4499726af47 230 Hamap MF_00551 Uridine kinase [udk]. 8 212 37.058 T 15-10-2018 IPR026008 Uridine kinase GO:0004849|GO:0005524|GO:0016773 KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 Trad_1955 d0f8b0363929a78ee9cdf4499726af47 230 SUPERFAMILY SSF52540 12 204 7.04E-47 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_1955 d0f8b0363929a78ee9cdf4499726af47 230 PRINTS PR00988 Uridine kinase signature 142 152 1.8E-33 T 15-10-2018 Trad_1955 d0f8b0363929a78ee9cdf4499726af47 230 PRINTS PR00988 Uridine kinase signature 86 101 1.8E-33 T 15-10-2018 Trad_1955 d0f8b0363929a78ee9cdf4499726af47 230 PRINTS PR00988 Uridine kinase signature 11 28 1.8E-33 T 15-10-2018 Trad_1955 d0f8b0363929a78ee9cdf4499726af47 230 PRINTS PR00988 Uridine kinase signature 178 191 1.8E-33 T 15-10-2018 Trad_1955 d0f8b0363929a78ee9cdf4499726af47 230 PRINTS PR00988 Uridine kinase signature 156 167 1.8E-33 T 15-10-2018 Trad_1955 d0f8b0363929a78ee9cdf4499726af47 230 PRINTS PR00988 Uridine kinase signature 41 52 1.8E-33 T 15-10-2018 Trad_1955 d0f8b0363929a78ee9cdf4499726af47 230 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 13 198 5.0E-34 T 15-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 Trad_1955 d0f8b0363929a78ee9cdf4499726af47 230 TIGRFAM TIGR00235 udk: uridine kinase 9 210 9.5E-74 T 15-10-2018 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|Reactome: R-HSA-73614 Trad_1955 d0f8b0363929a78ee9cdf4499726af47 230 Gene3D G3DSA:3.40.50.300 7 216 1.4E-62 T 15-10-2018 Trad_1694 bd318afa895b359ee6b36dd39b125d55 325 Gene3D G3DSA:3.40.50.1820 32 323 6.4E-72 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold Trad_1694 bd318afa895b359ee6b36dd39b125d55 325 SUPERFAMILY SSF53474 43 321 8.58E-72 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold Trad_1694 bd318afa895b359ee6b36dd39b125d55 325 PRINTS PR00412 Epoxide hydrolase signature 264 280 1.3E-10 T 15-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Trad_1694 bd318afa895b359ee6b36dd39b125d55 325 PRINTS PR00412 Epoxide hydrolase signature 156 169 1.3E-10 T 15-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Trad_1694 bd318afa895b359ee6b36dd39b125d55 325 PRINTS PR00412 Epoxide hydrolase signature 297 319 1.3E-10 T 15-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Trad_1694 bd318afa895b359ee6b36dd39b125d55 325 PRINTS PR00412 Epoxide hydrolase signature 70 88 1.3E-10 T 15-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Trad_1694 bd318afa895b359ee6b36dd39b125d55 325 Pfam PF12697 Alpha/beta hydrolase family 66 315 4.2E-25 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Trad_1694 bd318afa895b359ee6b36dd39b125d55 325 PRINTS PR00111 Alpha/beta hydrolase fold signature 89 104 3.8E-16 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Trad_1694 bd318afa895b359ee6b36dd39b125d55 325 PRINTS PR00111 Alpha/beta hydrolase fold signature 142 155 3.8E-16 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Trad_1694 bd318afa895b359ee6b36dd39b125d55 325 PRINTS PR00111 Alpha/beta hydrolase fold signature 266 280 3.8E-16 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Trad_1694 bd318afa895b359ee6b36dd39b125d55 325 PRINTS PR00111 Alpha/beta hydrolase fold signature 156 169 3.8E-16 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Trad_0429 389d448dda18bcc20b833414f86c1156 330 Hamap MF_01470 CRISPR-associated endonuclease Cas1 [cas1]. 1 312 22.749 T 15-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 Trad_0429 389d448dda18bcc20b833414f86c1156 330 Gene3D G3DSA:1.20.120.920 85 326 1.1E-63 T 15-10-2018 Trad_0429 389d448dda18bcc20b833414f86c1156 330 Pfam PF01867 CRISPR associated protein Cas1 4 278 8.3E-69 T 15-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 Trad_0429 389d448dda18bcc20b833414f86c1156 330 Gene3D G3DSA:3.100.10.20 2 79 2.0E-13 T 15-10-2018 Trad_0429 389d448dda18bcc20b833414f86c1156 330 TIGRFAM TIGR00287 cas1: CRISPR-associated endonuclease Cas1 4 322 3.3E-67 T 15-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 Trad_2225 c75f3f4cc7453168d2a76290df4d8728 1819 SUPERFAMILY SSF52540 377 631 2.3E-15 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_2225 c75f3f4cc7453168d2a76290df4d8728 1819 Pfam PF13195 Protein of unknown function (DUF4011) 21 267 2.7E-37 T 15-10-2018 IPR025103 Protein of unknown function DUF4011 Trad_2225 c75f3f4cc7453168d2a76290df4d8728 1819 SUPERFAMILY SSF52980 1596 1702 7.51E-18 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 Trad_2225 c75f3f4cc7453168d2a76290df4d8728 1819 Pfam PF13087 AAA domain 1371 1556 3.6E-14 T 15-10-2018 Trad_2225 c75f3f4cc7453168d2a76290df4d8728 1819 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 1744 1816 1.6E-9 T 15-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 Trad_2225 c75f3f4cc7453168d2a76290df4d8728 1819 Gene3D G3DSA:3.40.50.300 1383 1569 2.8E-26 T 15-10-2018 Trad_2225 c75f3f4cc7453168d2a76290df4d8728 1819 Gene3D G3DSA:3.10.50.30 1739 1816 7.6E-9 T 15-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 Trad_2225 c75f3f4cc7453168d2a76290df4d8728 1819 Gene3D G3DSA:3.40.50.300 1146 1357 3.7E-15 T 15-10-2018 Trad_2225 c75f3f4cc7453168d2a76290df4d8728 1819 Gene3D G3DSA:3.40.50.300 330 571 4.4E-18 T 15-10-2018 Trad_2225 c75f3f4cc7453168d2a76290df4d8728 1819 Pfam PF04480 Protein of unknown function (DUF559) 1617 1695 1.6E-4 T 15-10-2018 IPR007569 Protein of unknown function DUF559 Trad_2225 c75f3f4cc7453168d2a76290df4d8728 1819 Gene3D G3DSA:3.40.960.10 1598 1704 3.0E-20 T 15-10-2018 Trad_2225 c75f3f4cc7453168d2a76290df4d8728 1819 SUPERFAMILY SSF52540 374 1555 8.15E-34 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_2225 c75f3f4cc7453168d2a76290df4d8728 1819 Pfam PF13086 AAA domain 1301 1342 1.8E-7 T 15-10-2018 Trad_2225 c75f3f4cc7453168d2a76290df4d8728 1819 SUPERFAMILY SSF54534 1742 1815 1.44E-8 T 15-10-2018 Trad_2225 c75f3f4cc7453168d2a76290df4d8728 1819 SMART SM00952 1645 1702 1.2E-4 T 15-10-2018 IPR013584 RAP domain Trad_1049 06f2cc25a4da4d0dceaf8f53747ab8ee 111 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 11 108 3.2E-33 T 15-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_1049 06f2cc25a4da4d0dceaf8f53747ab8ee 111 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 47 109 7.2E-25 T 15-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_1049 06f2cc25a4da4d0dceaf8f53747ab8ee 111 SMART SM00739 11 38 1.4E-5 T 15-10-2018 IPR005824 KOW Trad_1049 06f2cc25a4da4d0dceaf8f53747ab8ee 111 Gene3D G3DSA:2.30.30.30 1 108 8.2E-39 T 15-10-2018 IPR014722 Ribosomal protein L2, domain 2 Trad_1049 06f2cc25a4da4d0dceaf8f53747ab8ee 111 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 10 105 20.099 T 15-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_1049 06f2cc25a4da4d0dceaf8f53747ab8ee 111 ProSitePatterns PS01108 Ribosomal protein L24 signature. 15 32 - T 15-10-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Trad_1049 06f2cc25a4da4d0dceaf8f53747ab8ee 111 SUPERFAMILY SSF50104 6 107 1.35E-34 T 15-10-2018 IPR008991 Translation protein SH3-like domain superfamily Trad_1049 06f2cc25a4da4d0dceaf8f53747ab8ee 111 Pfam PF00467 KOW motif 14 45 5.3E-9 T 15-10-2018 IPR005824 KOW Trad_1143 e7b8ca3a3a54552d7a6512e39a3d6de5 497 Gene3D G3DSA:3.40.50.300 254 496 8.2E-50 T 15-10-2018 Trad_1143 e7b8ca3a3a54552d7a6512e39a3d6de5 497 SUPERFAMILY SSF52540 266 474 4.89E-46 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_1143 e7b8ca3a3a54552d7a6512e39a3d6de5 497 Pfam PF00005 ABC transporter 19 168 8.2E-32 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Trad_1143 e7b8ca3a3a54552d7a6512e39a3d6de5 497 SUPERFAMILY SSF52540 3 229 2.36E-57 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_1143 e7b8ca3a3a54552d7a6512e39a3d6de5 497 ProSitePatterns PS00211 ABC transporters family signature. 390 404 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Trad_1143 e7b8ca3a3a54552d7a6512e39a3d6de5 497 Gene3D G3DSA:3.40.50.300 1 236 1.4E-57 T 15-10-2018 Trad_1143 e7b8ca3a3a54552d7a6512e39a3d6de5 497 SMART SM00382 28 216 1.1E-12 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_1143 e7b8ca3a3a54552d7a6512e39a3d6de5 497 SMART SM00382 276 466 2.0E-4 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_1143 e7b8ca3a3a54552d7a6512e39a3d6de5 497 Pfam PF00005 ABC transporter 268 418 1.2E-23 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Trad_2028 e3edf431d3de26e03ed5c67d12866b73 486 Gene3D G3DSA:3.40.50.300 257 472 6.3E-14 T 15-10-2018 Trad_2028 e3edf431d3de26e03ed5c67d12866b73 486 SUPERFAMILY SSF52540 258 465 1.74E-10 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_0587 a30aa49cbfda4cd3e7a7ec9ab1c0cc65 310 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 87 293 4.7E-18 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Trad_0587 a30aa49cbfda4cd3e7a7ec9ab1c0cc65 310 Gene3D G3DSA:1.10.3720.10 63 303 5.5E-60 T 15-10-2018 IPR035906 MetI-like superfamily Trad_0587 a30aa49cbfda4cd3e7a7ec9ab1c0cc65 310 SUPERFAMILY SSF161098 54 293 4.06E-53 T 15-10-2018 IPR035906 MetI-like superfamily Trad_1233 71c43948fb33fe789f75a2161754887d 340 TIGRFAM TIGR04380 myo_inos_iolG: inositol 2-dehydrogenase 6 329 6.5E-116 T 15-10-2018 IPR030827 Inositol 2-dehydrogenase Trad_1233 71c43948fb33fe789f75a2161754887d 340 Gene3D G3DSA:3.30.360.10 127 336 4.4E-62 T 15-10-2018 Trad_1233 71c43948fb33fe789f75a2161754887d 340 SUPERFAMILY SSF51735 2 151 2.11E-50 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_1233 71c43948fb33fe789f75a2161754887d 340 Gene3D G3DSA:3.40.50.720 3 126 6.9E-37 T 15-10-2018 Trad_1233 71c43948fb33fe789f75a2161754887d 340 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 6 124 1.3E-30 T 15-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 Trad_1233 71c43948fb33fe789f75a2161754887d 340 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 136 242 2.9E-10 T 15-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 Trad_1233 71c43948fb33fe789f75a2161754887d 340 SUPERFAMILY SSF55347 129 285 1.16E-33 T 15-10-2018 Trad_2901 4fbb72af183b7df1cb3806fc4c274370 525 Pfam PF05833 Fibronectin-binding protein A N-terminus (FbpA) 8 226 5.1E-26 T 15-10-2018 Trad_2901 4fbb72af183b7df1cb3806fc4c274370 525 Pfam PF05833 Fibronectin-binding protein A N-terminus (FbpA) 251 386 2.2E-19 T 15-10-2018 Trad_2901 4fbb72af183b7df1cb3806fc4c274370 525 Gene3D G3DSA:2.30.310.10 3 158 4.2E-19 T 15-10-2018 Trad_2901 4fbb72af183b7df1cb3806fc4c274370 525 Pfam PF05670 Domain of unknown function (DUF814) 407 491 2.4E-26 T 15-10-2018 IPR008532 Domain of unknown function DUF814 Trad_1228 b6a4684b96c7ba7bccd279adc29c48a9 277 PIRSF PIRSF036628 1 263 1.4E-81 T 15-10-2018 IPR024203 5-deoxy-glucuronate isomerase, IolB GO:0008880|GO:0019310 KEGG: 00562+5.3.1.30 Trad_1228 b6a4684b96c7ba7bccd279adc29c48a9 277 Gene3D G3DSA:2.60.120.10 118 262 2.4E-57 T 15-10-2018 IPR014710 RmlC-like jelly roll fold Trad_1228 b6a4684b96c7ba7bccd279adc29c48a9 277 SUPERFAMILY SSF51182 11 246 2.78E-57 T 15-10-2018 IPR011051 RmlC-like cupin domain superfamily Trad_1228 b6a4684b96c7ba7bccd279adc29c48a9 277 Pfam PF04962 KduI/IolB family 9 257 7.7E-89 T 15-10-2018 IPR021120 KduI/IolB isomerase GO:0016861 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 Trad_1228 b6a4684b96c7ba7bccd279adc29c48a9 277 TIGRFAM TIGR04378 myo_inos_iolB: 5-deoxy-glucuronate isomerase 15 258 1.1E-91 T 15-10-2018 IPR024203 5-deoxy-glucuronate isomerase, IolB GO:0008880|GO:0019310 KEGG: 00562+5.3.1.30 Trad_1228 b6a4684b96c7ba7bccd279adc29c48a9 277 Gene3D G3DSA:2.60.120.10 12 117 8.3E-33 T 15-10-2018 IPR014710 RmlC-like jelly roll fold Trad_0811 3b8dd9f7f4066d06c2cbd06956cddfcb 490 Gene3D G3DSA:1.20.1720.10 37 269 2.1E-44 T 15-10-2018 Trad_0811 3b8dd9f7f4066d06c2cbd06956cddfcb 490 Pfam PF07690 Major Facilitator Superfamily 42 265 3.1E-34 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Trad_0811 3b8dd9f7f4066d06c2cbd06956cddfcb 490 Pfam PF07690 Major Facilitator Superfamily 295 486 1.9E-13 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Trad_0811 3b8dd9f7f4066d06c2cbd06956cddfcb 490 SUPERFAMILY SSF103473 28 485 2.09E-61 T 15-10-2018 IPR036259 MFS transporter superfamily Trad_0811 3b8dd9f7f4066d06c2cbd06956cddfcb 490 Gene3D G3DSA:1.20.1250.20 279 487 3.4E-22 T 15-10-2018 Trad_0811 3b8dd9f7f4066d06c2cbd06956cddfcb 490 PRINTS PR01036 Tetracycline resistance protein TetB signature 40 64 1.8E-18 T 15-10-2018 Trad_0811 3b8dd9f7f4066d06c2cbd06956cddfcb 490 PRINTS PR01036 Tetracycline resistance protein TetB signature 161 185 1.8E-18 T 15-10-2018 Trad_0811 3b8dd9f7f4066d06c2cbd06956cddfcb 490 PRINTS PR01036 Tetracycline resistance protein TetB signature 422 441 1.8E-18 T 15-10-2018 Trad_0811 3b8dd9f7f4066d06c2cbd06956cddfcb 490 PRINTS PR01036 Tetracycline resistance protein TetB signature 131 151 1.8E-18 T 15-10-2018 Trad_0811 3b8dd9f7f4066d06c2cbd06956cddfcb 490 PRINTS PR01036 Tetracycline resistance protein TetB signature 325 349 1.8E-18 T 15-10-2018 Trad_1105 a4a0d0aa12d07ccf46991bfd5898a0ac 930 Pfam PF13558 Putative exonuclease SbcCD, C subunit 807 889 5.6E-13 T 15-10-2018 Trad_1105 a4a0d0aa12d07ccf46991bfd5898a0ac 930 Gene3D G3DSA:3.40.50.300 676 926 8.1E-28 T 15-10-2018 Trad_1105 a4a0d0aa12d07ccf46991bfd5898a0ac 930 Gene3D G3DSA:3.40.50.300 2 287 4.0E-40 T 15-10-2018 Trad_1105 a4a0d0aa12d07ccf46991bfd5898a0ac 930 Pfam PF13476 AAA domain 5 270 1.2E-24 T 15-10-2018 IPR038729 Rad50/SbcC-type AAA domain Trad_1105 a4a0d0aa12d07ccf46991bfd5898a0ac 930 SUPERFAMILY SSF52540 3 922 8.01E-42 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_0035 1f61136bc2bfec638b2678c6e5c5946a 152 PIRSF PIRSF004505 1 151 1.0E-41 T 15-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 Trad_0035 1f61136bc2bfec638b2678c6e5c5946a 152 Pfam PF02590 Predicted SPOUT methyltransferase 2 150 8.9E-45 T 15-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 Trad_0035 1f61136bc2bfec638b2678c6e5c5946a 152 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 151 26.535 T 15-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 Trad_0035 1f61136bc2bfec638b2678c6e5c5946a 152 Gene3D G3DSA:3.40.1280.10 2 152 3.9E-47 T 15-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Trad_0035 1f61136bc2bfec638b2678c6e5c5946a 152 SUPERFAMILY SSF75217 2 149 5.62E-39 T 15-10-2018 IPR029028 Alpha/beta knot methyltransferases Trad_0304 c59b98279df61ec8fa6e7ff10ac45b18 147 SUPERFAMILY SSF81593 10 134 1.53E-40 T 15-10-2018 Trad_0304 c59b98279df61ec8fa6e7ff10ac45b18 147 Pfam PF05168 HEPN domain 14 131 1.2E-30 T 15-10-2018 IPR007842 HEPN domain Trad_0304 c59b98279df61ec8fa6e7ff10ac45b18 147 Gene3D G3DSA:1.20.120.330 9 136 4.4E-37 T 15-10-2018 Trad_0304 c59b98279df61ec8fa6e7ff10ac45b18 147 SMART SM00748 16 127 1.4E-33 T 15-10-2018 IPR007842 HEPN domain Trad_1517 49439ed794c870d038cd6f35eb89d40b 293 Gene3D G3DSA:2.160.10.10 74 247 6.7E-26 T 15-10-2018 Trad_1517 49439ed794c870d038cd6f35eb89d40b 293 SUPERFAMILY SSF51161 113 245 7.76E-29 T 15-10-2018 IPR011004 Trimeric LpxA-like superfamily Trad_1567 0f3488b9ea5f248db9e519fa375da7bb 753 Gene3D G3DSA:1.20.1640.10 145 344 3.8E-6 T 15-10-2018 Trad_1567 0f3488b9ea5f248db9e519fa375da7bb 753 Pfam PF03176 MMPL family 495 748 4.4E-28 T 15-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 Trad_1567 0f3488b9ea5f248db9e519fa375da7bb 753 Pfam PF03176 MMPL family 136 372 1.6E-44 T 15-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 Trad_1567 0f3488b9ea5f248db9e519fa375da7bb 753 SUPERFAMILY SSF82866 503 735 3.92E-29 T 15-10-2018 Trad_1567 0f3488b9ea5f248db9e519fa375da7bb 753 SUPERFAMILY SSF82866 124 342 1.57E-26 T 15-10-2018 Trad_2805 028e4ae962bfebc99645bf8ed3ac2fe2 464 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 29 103 2.7E-8 T 15-10-2018 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 Trad_2805 028e4ae962bfebc99645bf8ed3ac2fe2 464 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 332 418 3.4E-10 T 15-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Trad_2805 028e4ae962bfebc99645bf8ed3ac2fe2 464 SUPERFAMILY SSF46626 311 425 3.95E-21 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Trad_2805 028e4ae962bfebc99645bf8ed3ac2fe2 464 Gene3D G3DSA:1.10.760.10 333 464 5.1E-40 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Trad_0897 000acf1dc32f83179da6d3a5aaeace4e 924 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 783 922 6.1E-43 T 15-10-2018 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 Trad_0897 000acf1dc32f83179da6d3a5aaeace4e 924 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 6 921 0.0 T 15-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 Trad_0897 000acf1dc32f83179da6d3a5aaeace4e 924 Pfam PF00676 Dehydrogenase E1 component 201 512 4.4E-53 T 15-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 Trad_0897 000acf1dc32f83179da6d3a5aaeace4e 924 Gene3D G3DSA:3.40.50.970 153 517 2.3E-142 T 15-10-2018 Trad_0897 000acf1dc32f83179da6d3a5aaeace4e 924 SUPERFAMILY SSF52518 567 785 3.03E-50 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold Trad_0897 000acf1dc32f83179da6d3a5aaeace4e 924 SMART SM00861 585 778 1.2E-60 T 15-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Trad_0897 000acf1dc32f83179da6d3a5aaeace4e 924 PIRSF PIRSF000157 2 924 0.0 T 15-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 Trad_0897 000acf1dc32f83179da6d3a5aaeace4e 924 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 3 35 1.3E-10 T 15-10-2018 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 Trad_0897 000acf1dc32f83179da6d3a5aaeace4e 924 Pfam PF02779 Transketolase, pyrimidine binding domain 584 779 1.1E-61 T 15-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Trad_0897 000acf1dc32f83179da6d3a5aaeace4e 924 SUPERFAMILY SSF52518 140 528 8.1E-83 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold Trad_0897 000acf1dc32f83179da6d3a5aaeace4e 924 Gene3D G3DSA:1.10.287.1150 73 152 2.0E-19 T 15-10-2018 Trad_0897 000acf1dc32f83179da6d3a5aaeace4e 924 Gene3D G3DSA:3.40.50.12470 548 794 6.2E-162 T 15-10-2018 Trad_0897 000acf1dc32f83179da6d3a5aaeace4e 924 Gene3D G3DSA:3.40.50.11610 715 919 6.2E-162 T 15-10-2018 Trad_2739 8e5373a539861b2c65f440e0195d19da 438 SUPERFAMILY SSF53901 295 433 1.61E-33 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 Trad_2739 8e5373a539861b2c65f440e0195d19da 438 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 93 111 - T 15-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 Trad_2739 8e5373a539861b2c65f440e0195d19da 438 ProSitePatterns PS00099 Thiolases active site. 415 428 - T 15-10-2018 IPR020610 Thiolase, active site GO:0016747 Trad_2739 8e5373a539861b2c65f440e0195d19da 438 Pfam PF00108 Thiolase, N-terminal domain 13 286 1.2E-74 T 15-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 Trad_2739 8e5373a539861b2c65f440e0195d19da 438 PIRSF PIRSF000429 8 435 2.6E-123 T 15-10-2018 IPR002155 Thiolase GO:0016747 Trad_2739 8e5373a539861b2c65f440e0195d19da 438 Pfam PF02803 Thiolase, C-terminal domain 293 433 1.8E-42 T 15-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 Trad_2739 8e5373a539861b2c65f440e0195d19da 438 SUPERFAMILY SSF53901 13 292 2.07E-65 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 Trad_2739 8e5373a539861b2c65f440e0195d19da 438 Gene3D G3DSA:3.40.47.10 4 434 6.2E-126 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 Trad_2739 8e5373a539861b2c65f440e0195d19da 438 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 16 432 5.0E-127 T 15-10-2018 IPR002155 Thiolase GO:0016747 Trad_2739 8e5373a539861b2c65f440e0195d19da 438 ProSitePatterns PS00737 Thiolases signature 2. 380 396 - T 15-10-2018 IPR020613 Thiolase, conserved site GO:0016747 Trad_0694 dadeedc9c08dd49eb8589a1f381c8dfb 322 Gene3D G3DSA:3.40.50.2300 33 303 2.0E-93 T 15-10-2018 Trad_0694 dadeedc9c08dd49eb8589a1f381c8dfb 322 Gene3D G3DSA:3.40.50.2300 139 315 2.0E-93 T 15-10-2018 Trad_0694 dadeedc9c08dd49eb8589a1f381c8dfb 322 Pfam PF13407 Periplasmic binding protein domain 33 290 1.3E-40 T 15-10-2018 IPR025997 Periplasmic binding protein Trad_0694 dadeedc9c08dd49eb8589a1f381c8dfb 322 SUPERFAMILY SSF53822 10 315 4.04E-57 T 15-10-2018 IPR028082 Periplasmic binding protein-like I Trad_0685 1da8ea86fd1d847cc137d2687f48c6c0 200 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 7 194 13.25 T 15-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 Trad_0685 1da8ea86fd1d847cc137d2687f48c6c0 200 Pfam PF02660 Glycerol-3-phosphate acyltransferase 12 191 1.7E-32 T 15-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 Trad_0685 1da8ea86fd1d847cc137d2687f48c6c0 200 SMART SM01207 10 186 6.7E-34 T 15-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 Trad_2417 7261ac6b61b70997c130369913f26fd4 316 SUPERFAMILY SSF161098 90 297 7.19E-17 T 15-10-2018 IPR035906 MetI-like superfamily Trad_2417 7261ac6b61b70997c130369913f26fd4 316 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 311 6.1E-38 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Trad_2417 7261ac6b61b70997c130369913f26fd4 316 Gene3D G3DSA:1.10.3720.10 84 307 3.8E-25 T 15-10-2018 IPR035906 MetI-like superfamily Trad_2223 2a21f82fcb380d7a849925f2fbc2177f 552 Gene3D G3DSA:1.10.1390.10 515 552 4.8E-20 T 15-10-2018 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Trad_2223 2a21f82fcb380d7a849925f2fbc2177f 552 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 49 528 41.665 T 15-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Trad_2223 2a21f82fcb380d7a849925f2fbc2177f 552 Pfam PF00342 Phosphoglucose isomerase 55 545 6.4E-238 T 15-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Trad_2223 2a21f82fcb380d7a849925f2fbc2177f 552 Gene3D G3DSA:3.40.50.10490 101 295 3.6E-232 T 15-10-2018 Trad_2223 2a21f82fcb380d7a849925f2fbc2177f 552 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 269 282 - T 15-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Trad_2223 2a21f82fcb380d7a849925f2fbc2177f 552 SUPERFAMILY SSF53697 14 551 1.0E-220 T 15-10-2018 Trad_2223 2a21f82fcb380d7a849925f2fbc2177f 552 Gene3D G3DSA:3.40.50.10490 16 514 3.6E-232 T 15-10-2018 Trad_2223 2a21f82fcb380d7a849925f2fbc2177f 552 PRINTS PR00662 Glucose-6-phosphate isomerase signature 265 283 1.4E-50 T 15-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Trad_2223 2a21f82fcb380d7a849925f2fbc2177f 552 PRINTS PR00662 Glucose-6-phosphate isomerase signature 153 172 1.4E-50 T 15-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Trad_2223 2a21f82fcb380d7a849925f2fbc2177f 552 PRINTS PR00662 Glucose-6-phosphate isomerase signature 487 501 1.4E-50 T 15-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Trad_2223 2a21f82fcb380d7a849925f2fbc2177f 552 PRINTS PR00662 Glucose-6-phosphate isomerase signature 469 487 1.4E-50 T 15-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Trad_2223 2a21f82fcb380d7a849925f2fbc2177f 552 PRINTS PR00662 Glucose-6-phosphate isomerase signature 342 363 1.4E-50 T 15-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Trad_2223 2a21f82fcb380d7a849925f2fbc2177f 552 PRINTS PR00662 Glucose-6-phosphate isomerase signature 501 514 1.4E-50 T 15-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Trad_2223 2a21f82fcb380d7a849925f2fbc2177f 552 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 501 518 - T 15-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Trad_1050 41f7a9122f043a0d51498772566dc9f0 183 Pfam PF00281 Ribosomal protein L5 28 84 2.9E-24 T 15-10-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Trad_1050 41f7a9122f043a0d51498772566dc9f0 183 Pfam PF00673 ribosomal L5P family C-terminus 88 181 6.7E-39 T 15-10-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Trad_1050 41f7a9122f043a0d51498772566dc9f0 183 SUPERFAMILY SSF55282 8 182 4.71E-71 T 15-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Trad_1050 41f7a9122f043a0d51498772566dc9f0 183 Gene3D G3DSA:3.30.1440.10 2 183 1.1E-76 T 15-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Trad_1050 41f7a9122f043a0d51498772566dc9f0 183 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 5 183 41.545 T 15-10-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Trad_1050 41f7a9122f043a0d51498772566dc9f0 183 PIRSF PIRSF002161 1 183 1.3E-60 T 15-10-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Trad_2229 51e0214f8b3355294aeff3f834453392 315 Gene3D G3DSA:1.10.760.10 197 308 5.3E-8 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Trad_2229 51e0214f8b3355294aeff3f834453392 315 Gene3D G3DSA:1.10.760.10 56 179 3.7E-19 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Trad_2229 51e0214f8b3355294aeff3f834453392 315 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 58 135 5.7E-7 T 15-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Trad_2229 51e0214f8b3355294aeff3f834453392 315 SUPERFAMILY SSF46626 28 142 2.66E-17 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Trad_2229 51e0214f8b3355294aeff3f834453392 315 SUPERFAMILY SSF46626 184 260 1.2E-8 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Trad_2517 5700dd7e0000781bab4b98b2d7131951 396 Gene3D G3DSA:3.40.640.10 4 252 4.3E-87 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Trad_2517 5700dd7e0000781bab4b98b2d7131951 396 PIRSF PIRSF001434 1 391 2.8E-144 T 15-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 Trad_2517 5700dd7e0000781bab4b98b2d7131951 396 Gene3D G3DSA:3.90.1150.10 256 395 1.4E-55 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Trad_2517 5700dd7e0000781bab4b98b2d7131951 396 SUPERFAMILY SSF53383 17 389 1.18E-116 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Trad_2517 5700dd7e0000781bab4b98b2d7131951 396 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 8 387 6.3E-129 T 15-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 Trad_0584 a80dd0ca740100e477d1a15fb6ebb55e 442 Pfam PF00271 Helicase conserved C-terminal domain 232 338 3.8E-27 T 15-10-2018 IPR001650 Helicase, C-terminal Trad_0584 a80dd0ca740100e477d1a15fb6ebb55e 442 Pfam PF00270 DEAD/DEAH box helicase 30 195 2.2E-42 T 15-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Trad_0584 a80dd0ca740100e477d1a15fb6ebb55e 442 SMART SM00490 258 339 1.4E-28 T 15-10-2018 IPR001650 Helicase, C-terminal Trad_0584 a80dd0ca740100e477d1a15fb6ebb55e 442 SUPERFAMILY SSF52540 76 360 1.58E-71 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_0584 a80dd0ca740100e477d1a15fb6ebb55e 442 Gene3D G3DSA:3.40.50.300 221 377 1.9E-48 T 15-10-2018 Trad_0584 a80dd0ca740100e477d1a15fb6ebb55e 442 Gene3D G3DSA:3.40.50.300 1 212 1.2E-73 T 15-10-2018 Trad_0584 a80dd0ca740100e477d1a15fb6ebb55e 442 SUPERFAMILY SSF52540 26 99 2.83E-5 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_0584 a80dd0ca740100e477d1a15fb6ebb55e 442 SMART SM00487 25 222 1.0E-57 T 15-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Trad_1265 9653f42608cf02ee1e34b42fffea0346 383 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 9 136 5.1E-54 T 15-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Trad_1265 9653f42608cf02ee1e34b42fffea0346 383 SUPERFAMILY SSF52021 8 149 1.26E-57 T 15-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Trad_1265 9653f42608cf02ee1e34b42fffea0346 383 Pfam PF00117 Glutamine amidotransferase class-I 186 363 2.1E-39 T 15-10-2018 IPR017926 Glutamine amidotransferase Trad_1265 9653f42608cf02ee1e34b42fffea0346 383 PRINTS PR00096 Glutamine amidotransferase superfamily signature 254 265 5.0E-12 T 15-10-2018 Trad_1265 9653f42608cf02ee1e34b42fffea0346 383 PRINTS PR00096 Glutamine amidotransferase superfamily signature 340 353 5.0E-12 T 15-10-2018 Trad_1265 9653f42608cf02ee1e34b42fffea0346 383 PRINTS PR00096 Glutamine amidotransferase superfamily signature 227 236 5.0E-12 T 15-10-2018 Trad_1265 9653f42608cf02ee1e34b42fffea0346 383 Gene3D G3DSA:3.50.30.20 7 155 1.2E-58 T 15-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Trad_1265 9653f42608cf02ee1e34b42fffea0346 383 PRINTS PR00097 Anthranilate synthase component II signature 340 353 6.1E-7 T 15-10-2018 Trad_1265 9653f42608cf02ee1e34b42fffea0346 383 PRINTS PR00097 Anthranilate synthase component II signature 227 236 6.1E-7 T 15-10-2018 Trad_1265 9653f42608cf02ee1e34b42fffea0346 383 PRINTS PR00097 Anthranilate synthase component II signature 254 265 6.1E-7 T 15-10-2018 Trad_1265 9653f42608cf02ee1e34b42fffea0346 383 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 9 366 7.3E-147 T 15-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Trad_1265 9653f42608cf02ee1e34b42fffea0346 383 SUPERFAMILY SSF52317 162 366 1.17E-55 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like Trad_1265 9653f42608cf02ee1e34b42fffea0346 383 SMART SM01097 7 137 1.1E-89 T 15-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Trad_1265 9653f42608cf02ee1e34b42fffea0346 383 Gene3D G3DSA:3.40.50.880 176 370 4.1E-34 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like Trad_1265 9653f42608cf02ee1e34b42fffea0346 383 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 271 288 8.0E-33 T 15-10-2018 Trad_1265 9653f42608cf02ee1e34b42fffea0346 383 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 185 199 8.0E-33 T 15-10-2018 Trad_1265 9653f42608cf02ee1e34b42fffea0346 383 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 296 307 8.0E-33 T 15-10-2018 Trad_1265 9653f42608cf02ee1e34b42fffea0346 383 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 254 270 8.0E-33 T 15-10-2018 Trad_1265 9653f42608cf02ee1e34b42fffea0346 383 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 224 238 8.0E-33 T 15-10-2018 Trad_1265 9653f42608cf02ee1e34b42fffea0346 383 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 7 369 46.493 T 15-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Trad_2297 3281b6eaf40661384e023add830d5f58 433 ProSitePatterns PS00523 Sulfatases signature 1. 47 59 - T 15-10-2018 IPR024607 Sulfatase, conserved site Trad_2297 3281b6eaf40661384e023add830d5f58 433 Gene3D G3DSA:3.40.720.10 3 408 9.3E-90 T 15-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 Trad_2297 3281b6eaf40661384e023add830d5f58 433 SUPERFAMILY SSF53649 3 407 7.46E-90 T 15-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 Trad_2297 3281b6eaf40661384e023add830d5f58 433 Pfam PF00884 Sulfatase 3 277 3.3E-46 T 15-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 Trad_2101 0e1dafa782bb645b0a86acfbe1ac4a41 331 Gene3D G3DSA:1.10.3720.10 70 325 3.2E-65 T 15-10-2018 IPR035906 MetI-like superfamily Trad_2101 0e1dafa782bb645b0a86acfbe1ac4a41 331 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 312 8.2E-14 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Trad_2101 0e1dafa782bb645b0a86acfbe1ac4a41 331 SUPERFAMILY SSF161098 26 327 3.14E-56 T 15-10-2018 IPR035906 MetI-like superfamily Trad_2785 9c6810f51373367b0196cf86d462020d 197 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 95 5.5E-36 T 15-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Trad_2785 9c6810f51373367b0196cf86d462020d 197 Hamap MF_00050 Elongation factor Ts [tsf]. 1 197 45.736 T 15-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Trad_2785 9c6810f51373367b0196cf86d462020d 197 Gene3D G3DSA:3.30.479.20 59 196 9.6E-57 T 15-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 Trad_2785 9c6810f51373367b0196cf86d462020d 197 Pfam PF00889 Elongation factor TS 37 197 7.5E-40 T 15-10-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0006414 Reactome: R-HSA-5389840 Trad_2785 9c6810f51373367b0196cf86d462020d 197 ProSitePatterns PS01127 Elongation factor Ts signature 2. 76 86 - T 15-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Trad_2785 9c6810f51373367b0196cf86d462020d 197 SUPERFAMILY SSF46934 3 54 1.88E-17 T 15-10-2018 IPR009060 UBA-like superfamily GO:0005515 Trad_2785 9c6810f51373367b0196cf86d462020d 197 SUPERFAMILY SSF54713 56 197 9.94E-53 T 15-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 Trad_2785 9c6810f51373367b0196cf86d462020d 197 Gene3D G3DSA:1.10.286.20 111 155 9.6E-57 T 15-10-2018 Trad_2785 9c6810f51373367b0196cf86d462020d 197 Gene3D G3DSA:1.10.8.10 3 55 9.4E-24 T 15-10-2018 Trad_2785 9c6810f51373367b0196cf86d462020d 197 ProSitePatterns PS01126 Elongation factor Ts signature 1. 11 26 - T 15-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Trad_0678 f25870f7155b50bba9c0094eaf5ca968 315 SUPERFAMILY SSF52283 32 127 8.93E-7 T 15-10-2018 Trad_0678 f25870f7155b50bba9c0094eaf5ca968 315 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 102 285 2.3E-47 T 15-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 Trad_0678 f25870f7155b50bba9c0094eaf5ca968 315 SUPERFAMILY SSF51735 94 286 1.83E-45 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_0678 f25870f7155b50bba9c0094eaf5ca968 315 Gene3D G3DSA:3.40.50.720 95 288 3.4E-82 T 15-10-2018 Trad_0678 f25870f7155b50bba9c0094eaf5ca968 315 Gene3D G3DSA:3.40.50.720 18 311 3.4E-82 T 15-10-2018 Trad_0747 b89747b7ba723b1c746fa23c35fd29d1 324 SUPERFAMILY SSF52922 188 323 3.8E-39 T 15-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Trad_0747 b89747b7ba723b1c746fa23c35fd29d1 324 Pfam PF02779 Transketolase, pyrimidine binding domain 6 178 1.1E-51 T 15-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Trad_0747 b89747b7ba723b1c746fa23c35fd29d1 324 Pfam PF02780 Transketolase, C-terminal domain 194 313 8.9E-35 T 15-10-2018 IPR033248 Transketolase, C-terminal domain Trad_0747 b89747b7ba723b1c746fa23c35fd29d1 324 Gene3D G3DSA:3.40.50.970 1 192 1.7E-91 T 15-10-2018 Trad_0747 b89747b7ba723b1c746fa23c35fd29d1 324 Gene3D G3DSA:3.40.50.920 193 324 6.7E-45 T 15-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Trad_0747 b89747b7ba723b1c746fa23c35fd29d1 324 SUPERFAMILY SSF52518 2 204 1.37E-73 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold Trad_0747 b89747b7ba723b1c746fa23c35fd29d1 324 SMART SM00861 4 179 2.1E-72 T 15-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Trad_1459 9ea7750a3a94aaea85d87830d3e28411 460 SUPERFAMILY SSF55424 344 454 1.29E-34 T 15-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Trad_1459 9ea7750a3a94aaea85d87830d3e28411 460 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 264 278 3.3E-50 T 15-10-2018 Trad_1459 9ea7750a3a94aaea85d87830d3e28411 460 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 307 314 3.3E-50 T 15-10-2018 Trad_1459 9ea7750a3a94aaea85d87830d3e28411 460 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 39 54 3.3E-50 T 15-10-2018 Trad_1459 9ea7750a3a94aaea85d87830d3e28411 460 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 139 148 3.3E-50 T 15-10-2018 Trad_1459 9ea7750a3a94aaea85d87830d3e28411 460 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 179 204 3.3E-50 T 15-10-2018 Trad_1459 9ea7750a3a94aaea85d87830d3e28411 460 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 3.3E-50 T 15-10-2018 Trad_1459 9ea7750a3a94aaea85d87830d3e28411 460 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 407 422 3.3E-50 T 15-10-2018 Trad_1459 9ea7750a3a94aaea85d87830d3e28411 460 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 429 449 3.3E-50 T 15-10-2018 Trad_1459 9ea7750a3a94aaea85d87830d3e28411 460 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 342 363 3.3E-50 T 15-10-2018 Trad_1459 9ea7750a3a94aaea85d87830d3e28411 460 PIRSF PIRSF000350 2 458 7.8E-86 T 15-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 Trad_1459 9ea7750a3a94aaea85d87830d3e28411 460 Gene3D G3DSA:3.50.50.60 148 270 3.1E-95 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Trad_1459 9ea7750a3a94aaea85d87830d3e28411 460 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 346 452 1.2E-30 T 15-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 Trad_1459 9ea7750a3a94aaea85d87830d3e28411 460 Gene3D G3DSA:3.50.50.60 6 325 3.1E-95 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Trad_1459 9ea7750a3a94aaea85d87830d3e28411 460 SUPERFAMILY SSF51905 6 379 3.09E-51 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Trad_1459 9ea7750a3a94aaea85d87830d3e28411 460 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 292 314 4.6E-23 T 15-10-2018 Trad_1459 9ea7750a3a94aaea85d87830d3e28411 460 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 263 279 4.6E-23 T 15-10-2018 Trad_1459 9ea7750a3a94aaea85d87830d3e28411 460 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 4.6E-23 T 15-10-2018 Trad_1459 9ea7750a3a94aaea85d87830d3e28411 460 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 136 154 4.6E-23 T 15-10-2018 Trad_1459 9ea7750a3a94aaea85d87830d3e28411 460 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 179 197 4.6E-23 T 15-10-2018 Trad_1459 9ea7750a3a94aaea85d87830d3e28411 460 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 325 4.4E-60 T 15-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Trad_1459 9ea7750a3a94aaea85d87830d3e28411 460 Gene3D G3DSA:3.30.390.30 344 460 9.2E-37 T 15-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Trad_2987 3825ed740d2923b3e5057fcaa4cff10b 178 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 19 160 7.6E-75 T 15-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Trad_2987 3825ed740d2923b3e5057fcaa4cff10b 178 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 126 142 - T 15-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Trad_2987 3825ed740d2923b3e5057fcaa4cff10b 178 Gene3D G3DSA:3.40.50.12280 1 178 2.9E-85 T 15-10-2018 Trad_2987 3825ed740d2923b3e5057fcaa4cff10b 178 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 12 159 43.822 T 15-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Trad_2987 3825ed740d2923b3e5057fcaa4cff10b 178 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 45 154 1.8E-25 T 15-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Trad_2987 3825ed740d2923b3e5057fcaa4cff10b 178 SUPERFAMILY SSF56770 17 165 3.92E-67 T 15-10-2018 Trad_0008 2209099145f0cdf05548c5a5e5ca461e 116 Gene3D G3DSA:3.30.70.60 55 98 1.4E-11 T 15-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 Trad_0008 2209099145f0cdf05548c5a5e5ca461e 116 ProSitePatterns PS01048 Ribosomal protein S6 signature. 44 53 - T 15-10-2018 IPR020815 Ribosomal protein S6, conserved site GO:0003735|GO:0005840|GO:0006412|GO:0019843 Trad_0008 2209099145f0cdf05548c5a5e5ca461e 116 SUPERFAMILY SSF54995 1 94 2.22E-23 T 15-10-2018 IPR035980 Ribosomal protein S6 superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_0008 2209099145f0cdf05548c5a5e5ca461e 116 Pfam PF01250 Ribosomal protein S6 3 92 3.9E-21 T 15-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_0008 2209099145f0cdf05548c5a5e5ca461e 116 Gene3D G3DSA:3.30.70.60 1 54 1.1E-14 T 15-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 Trad_0008 2209099145f0cdf05548c5a5e5ca461e 116 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 95 17.03 T 15-10-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 Trad_0008 2209099145f0cdf05548c5a5e5ca461e 116 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 92 3.3E-18 T 15-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_1898 93bd33f8e058be8364a9a625fcbeff22 694 Pfam PF01575 MaoC like domain 547 654 2.0E-27 T 15-10-2018 IPR002539 MaoC-like dehydratase domain Trad_1898 93bd33f8e058be8364a9a625fcbeff22 694 Pfam PF00171 Aldehyde dehydrogenase family 49 507 1.1E-57 T 15-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Trad_1898 93bd33f8e058be8364a9a625fcbeff22 694 SUPERFAMILY SSF53720 12 511 4.45E-80 T 15-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Trad_1898 93bd33f8e058be8364a9a625fcbeff22 694 Gene3D G3DSA:3.40.309.10 266 482 2.8E-148 T 15-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Trad_1898 93bd33f8e058be8364a9a625fcbeff22 694 TIGRFAM TIGR02278 PaaN-DH: phenylacetic acid degradation protein paaN 13 685 9.2E-299 T 15-10-2018 IPR011966 Phenylacetic acid degradation protein PaaN KEGG: 00360+3.3.2.12+1.2.1.91 Trad_1898 93bd33f8e058be8364a9a625fcbeff22 694 SUPERFAMILY SSF54637 536 688 1.27E-39 T 15-10-2018 IPR029069 HotDog domain superfamily Trad_1898 93bd33f8e058be8364a9a625fcbeff22 694 Gene3D G3DSA:3.10.129.10 538 694 1.6E-44 T 15-10-2018 Trad_1898 93bd33f8e058be8364a9a625fcbeff22 694 Gene3D G3DSA:3.40.605.10 19 494 2.8E-148 T 15-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Trad_0550 f1afa6569e63b05f3645c2baacfefbfe 796 SUPERFAMILY SSF56281 549 786 6.38E-36 T 15-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Trad_0550 f1afa6569e63b05f3645c2baacfefbfe 796 Pfam PF13567 Domain of unknown function (DUF4131) 182 220 8.3E-9 T 15-10-2018 IPR025405 Domain of unknown function DUF4131 Trad_0550 f1afa6569e63b05f3645c2baacfefbfe 796 Gene3D G3DSA:3.60.15.10 547 787 5.0E-54 T 15-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Trad_0550 f1afa6569e63b05f3645c2baacfefbfe 796 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 186 781 6.0E-67 T 15-10-2018 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 Trad_0550 f1afa6569e63b05f3645c2baacfefbfe 796 Pfam PF03772 Competence protein 253 518 4.8E-45 T 15-10-2018 IPR004477 ComEC/Rec2-related protein Trad_0550 f1afa6569e63b05f3645c2baacfefbfe 796 SMART SM00849 557 753 8.2E-5 T 15-10-2018 IPR001279 Metallo-beta-lactamase Trad_0550 f1afa6569e63b05f3645c2baacfefbfe 796 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 271 450 9.0E-18 T 15-10-2018 IPR004477 ComEC/Rec2-related protein Trad_2774 872d090285bba52280109a53b1f89eb6 77 Pfam PF06150 ChaB 9 75 5.0E-27 T 15-10-2018 IPR009317 ChaB Trad_2774 872d090285bba52280109a53b1f89eb6 77 Gene3D G3DSA:1.10.1740.70 2 76 3.5E-34 T 15-10-2018 Trad_2774 872d090285bba52280109a53b1f89eb6 77 SUPERFAMILY SSF140376 2 74 3.66E-28 T 15-10-2018 IPR037205 ChaB superfamily Trad_2965 373d4571c8946e7da31edcb15b6ea2b6 477 Gene3D G3DSA:3.40.50.10420 66 286 3.7E-8 T 15-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily Trad_2965 373d4571c8946e7da31edcb15b6ea2b6 477 SUPERFAMILY SSF54862 296 397 5.44E-14 T 15-10-2018 Trad_2965 373d4571c8946e7da31edcb15b6ea2b6 477 Pfam PF02589 LUD domain 79 285 5.7E-45 T 15-10-2018 IPR003741 LUD domain Trad_2965 373d4571c8946e7da31edcb15b6ea2b6 477 Pfam PF11870 Domain of unknown function (DUF3390) 394 475 2.6E-10 T 15-10-2018 IPR024569 4Fe-4S binding protein, C-terminal Trad_2965 373d4571c8946e7da31edcb15b6ea2b6 477 TIGRFAM TIGR00273 TIGR00273: iron-sulfur cluster-binding protein 26 459 5.5E-140 T 15-10-2018 IPR004452 4Fe-4S binding protein GO:0019516 Trad_2965 373d4571c8946e7da31edcb15b6ea2b6 477 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 318 329 - T 15-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Trad_2965 373d4571c8946e7da31edcb15b6ea2b6 477 SUPERFAMILY SSF100950 71 300 4.14E-35 T 15-10-2018 IPR037171 NagB/RpiA transferase-like Trad_2965 373d4571c8946e7da31edcb15b6ea2b6 477 Pfam PF13183 4Fe-4S dicluster domain 315 382 2.8E-8 T 15-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Trad_2275 f9e23c50ce37a6d70d2283e9e1c6bacd 455 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 226 242 4.8E-41 T 15-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Trad_2275 f9e23c50ce37a6d70d2283e9e1c6bacd 455 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 132 145 4.8E-41 T 15-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Trad_2275 f9e23c50ce37a6d70d2283e9e1c6bacd 455 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 156 184 4.8E-41 T 15-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Trad_2275 f9e23c50ce37a6d70d2283e9e1c6bacd 455 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 208 225 4.8E-41 T 15-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Trad_2275 f9e23c50ce37a6d70d2283e9e1c6bacd 455 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 317 343 4.8E-41 T 15-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Trad_2275 f9e23c50ce37a6d70d2283e9e1c6bacd 455 Gene3D G3DSA:3.40.50.720 9 418 9.7E-132 T 15-10-2018 Trad_2275 f9e23c50ce37a6d70d2283e9e1c6bacd 455 SUPERFAMILY SSF55347 166 451 1.96E-86 T 15-10-2018 Trad_2275 f9e23c50ce37a6d70d2283e9e1c6bacd 455 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 10 176 6.1E-38 T 15-10-2018 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Trad_2275 f9e23c50ce37a6d70d2283e9e1c6bacd 455 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 180 450 7.8E-82 T 15-10-2018 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Trad_2275 f9e23c50ce37a6d70d2283e9e1c6bacd 455 PIRSF PIRSF000110 2 455 7.5E-130 T 15-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Trad_2275 f9e23c50ce37a6d70d2283e9e1c6bacd 455 SUPERFAMILY SSF51735 5 178 5.91E-37 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_2275 f9e23c50ce37a6d70d2283e9e1c6bacd 455 Gene3D G3DSA:3.30.360.10 166 450 9.7E-132 T 15-10-2018 Trad_2275 f9e23c50ce37a6d70d2283e9e1c6bacd 455 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 166 172 - T 15-10-2018 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Trad_2275 f9e23c50ce37a6d70d2283e9e1c6bacd 455 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 5 455 62.326 T 15-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Trad_0223 b4839566a9b77f99ebc392bc53050cf1 253 SUPERFAMILY SSF52172 11 137 2.42E-38 T 15-10-2018 IPR011006 CheY-like superfamily Trad_0223 b4839566a9b77f99ebc392bc53050cf1 253 Gene3D G3DSA:1.10.10.10 144 250 2.4E-27 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Trad_0223 b4839566a9b77f99ebc392bc53050cf1 253 SMART SM00448 17 128 3.6E-41 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Trad_0223 b4839566a9b77f99ebc392bc53050cf1 253 SMART SM00862 170 247 1.6E-25 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Trad_0223 b4839566a9b77f99ebc392bc53050cf1 253 Pfam PF00072 Response regulator receiver domain 19 128 2.1E-25 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Trad_0223 b4839566a9b77f99ebc392bc53050cf1 253 Gene3D G3DSA:3.40.50.2300 13 143 1.0E-34 T 15-10-2018 Trad_0223 b4839566a9b77f99ebc392bc53050cf1 253 Pfam PF00486 Transcriptional regulatory protein, C terminal 176 247 3.6E-23 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Trad_0223 b4839566a9b77f99ebc392bc53050cf1 253 SUPERFAMILY SSF46894 147 248 2.07E-25 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Trad_0905 1cd0688cb97784828a53265adce9d5b7 224 PIRSF PIRSF000857 6 224 9.7E-63 T 15-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 Trad_0905 1cd0688cb97784828a53265adce9d5b7 224 Gene3D G3DSA:3.40.50.620 9 223 7.1E-55 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Trad_0905 1cd0688cb97784828a53265adce9d5b7 224 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 34 195 2.1E-31 T 15-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 Trad_0905 1cd0688cb97784828a53265adce9d5b7 224 SUPERFAMILY SSF52402 8 183 1.45E-37 T 15-10-2018 Trad_0078 611e95b7377b8c049f5466c29276ea4a 852 Gene3D G3DSA:2.60.120.380 584 711 4.1E-15 T 15-10-2018 Trad_0078 611e95b7377b8c049f5466c29276ea4a 852 Gene3D G3DSA:2.60.120.380 732 847 1.7E-11 T 15-10-2018 Trad_0078 611e95b7377b8c049f5466c29276ea4a 852 PRINTS PR00723 Subtilisin serine protease family (S8) signature 405 421 1.1E-12 T 15-10-2018 IPR015500 Peptidase S8, subtilisin-related Trad_0078 611e95b7377b8c049f5466c29276ea4a 852 PRINTS PR00723 Subtilisin serine protease family (S8) signature 159 178 1.1E-12 T 15-10-2018 IPR015500 Peptidase S8, subtilisin-related Trad_0078 611e95b7377b8c049f5466c29276ea4a 852 PRINTS PR00723 Subtilisin serine protease family (S8) signature 212 225 1.1E-12 T 15-10-2018 IPR015500 Peptidase S8, subtilisin-related Trad_0078 611e95b7377b8c049f5466c29276ea4a 852 Pfam PF00082 Subtilase family 159 465 7.7E-30 T 15-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 Trad_0078 611e95b7377b8c049f5466c29276ea4a 852 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 622 691 8.6E-7 T 15-10-2018 IPR007280 Peptidase, C-terminal, archaeal/bacterial Trad_0078 611e95b7377b8c049f5466c29276ea4a 852 Gene3D G3DSA:3.40.50.200 115 477 1.0E-61 T 15-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Trad_0078 611e95b7377b8c049f5466c29276ea4a 852 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 406 416 - T 15-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site Trad_0078 611e95b7377b8c049f5466c29276ea4a 852 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 216 226 - T 15-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site Trad_0078 611e95b7377b8c049f5466c29276ea4a 852 SUPERFAMILY SSF52743 141 475 3.01E-57 T 15-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Trad_2768 7563e02f954a08928511b66f8d9d161c 336 Gene3D G3DSA:3.20.20.70 12 336 1.2E-81 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Trad_2768 7563e02f954a08928511b66f8d9d161c 336 SUPERFAMILY SSF102114 15 287 9.42E-68 T 15-10-2018 Trad_2768 7563e02f954a08928511b66f8d9d161c 336 Pfam PF06463 Molybdenum Cofactor Synthesis C 194 316 8.7E-27 T 15-10-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Trad_2768 7563e02f954a08928511b66f8d9d161c 336 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 15 336 1.0E-96 T 15-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Trad_2768 7563e02f954a08928511b66f8d9d161c 336 SMART SM00729 24 227 5.7E-10 T 15-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Trad_2768 7563e02f954a08928511b66f8d9d161c 336 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 30 41 - T 15-10-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Trad_2768 7563e02f954a08928511b66f8d9d161c 336 Pfam PF04055 Radical SAM superfamily 28 187 4.9E-29 T 15-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Trad_0261 c8741c1b296d8109fd0501762a99d885 437 TIGRFAM TIGR01981 sufD: FeS assembly protein SufD 146 418 5.0E-73 T 15-10-2018 IPR011542 SUF system FeS cluster assembly, SufD GO:0016226 Trad_0261 c8741c1b296d8109fd0501762a99d885 437 Pfam PF01458 Uncharacterized protein family (UPF0051) 179 403 1.2E-70 T 15-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 Trad_0261 c8741c1b296d8109fd0501762a99d885 437 SUPERFAMILY SSF101960 11 428 2.88E-108 T 15-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily Trad_1092 ba541335f84e126898731bbf0d201737 146 SUPERFAMILY SSF46785 4 135 8.66E-30 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Trad_1092 ba541335f84e126898731bbf0d201737 146 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 50 68 - T 15-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site Trad_1092 ba541335f84e126898731bbf0d201737 146 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 4 136 3.0E-33 T 15-10-2018 IPR000944 Transcription regulator Rrf2-type Trad_1092 ba541335f84e126898731bbf0d201737 146 Pfam PF02082 Transcriptional regulator 3 83 8.5E-25 T 15-10-2018 IPR000944 Transcription regulator Rrf2-type Trad_1092 ba541335f84e126898731bbf0d201737 146 Gene3D G3DSA:1.10.10.10 1 142 3.2E-42 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Trad_2304 5998ada25b0b38e3c7d4bd6bc0b2b37b 103 Pfam PF09707 CRISPR-associated protein (Cas_Cas2CT1978) 1 86 4.6E-34 T 15-10-2018 IPR010152 CRISPR-associated protein Cas2 subtype Trad_2304 5998ada25b0b38e3c7d4bd6bc0b2b37b 103 TIGRFAM TIGR01873 cas_CT1978: CRISPR-associated endoribonuclease Cas2, subtype I-E/ECOLI 1 86 5.8E-19 T 15-10-2018 IPR010152 CRISPR-associated protein Cas2 subtype Trad_2304 5998ada25b0b38e3c7d4bd6bc0b2b37b 103 Gene3D G3DSA:3.30.70.240 1 75 7.7E-31 T 15-10-2018 Trad_0917 8c23febd0a45927695efeefc175a5866 247 Gene3D G3DSA:1.10.10.10 1 71 5.1E-17 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Trad_0917 8c23febd0a45927695efeefc175a5866 247 Pfam PF01614 Bacterial transcriptional regulator 127 232 1.1E-11 T 15-10-2018 IPR014757 Transcription regulator IclR, C-terminal Trad_0917 8c23febd0a45927695efeefc175a5866 247 SUPERFAMILY SSF46785 2 71 1.88E-13 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Trad_0917 8c23febd0a45927695efeefc175a5866 247 Pfam PF09339 IclR helix-turn-helix domain 3 52 2.5E-11 T 15-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 Trad_0917 8c23febd0a45927695efeefc175a5866 247 SMART SM00346 1 90 1.8E-8 T 15-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 Trad_0917 8c23febd0a45927695efeefc175a5866 247 SUPERFAMILY SSF55781 58 232 3.07E-28 T 15-10-2018 Trad_0917 8c23febd0a45927695efeefc175a5866 247 Gene3D G3DSA:3.30.450.40 72 237 2.5E-26 T 15-10-2018 IPR029016 GAF-like domain superfamily Trad_0139 f691e4ad6f397f0872bebb59398d25c2 1006 SUPERFAMILY SSF52540 407 652 1.64E-56 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_0139 f691e4ad6f397f0872bebb59398d25c2 1006 Pfam PF03461 TRCF domain 871 964 4.7E-23 T 15-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 Trad_0139 f691e4ad6f397f0872bebb59398d25c2 1006 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 16 971 24.57 T 15-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 Trad_0139 f691e4ad6f397f0872bebb59398d25c2 1006 Gene3D G3DSA:3.40.50.300 411 650 1.8E-209 T 15-10-2018 Trad_0139 f691e4ad6f397f0872bebb59398d25c2 1006 SMART SM00982 870 969 2.3E-25 T 15-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 Trad_0139 f691e4ad6f397f0872bebb59398d25c2 1006 SMART SM01058 348 445 2.8E-35 T 15-10-2018 IPR003711 CarD-like/TRCF domain Trad_0139 f691e4ad6f397f0872bebb59398d25c2 1006 Pfam PF00270 DEAD/DEAH box helicase 474 633 5.4E-17 T 15-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Trad_0139 f691e4ad6f397f0872bebb59398d25c2 1006 Gene3D G3DSA:3.90.1150.50 867 973 4.6E-21 T 15-10-2018 IPR037235 TRCF-like, C-terminal domain Trad_0139 f691e4ad6f397f0872bebb59398d25c2 1006 Gene3D G3DSA:3.40.50.300 348 857 1.8E-209 T 15-10-2018 Trad_0139 f691e4ad6f397f0872bebb59398d25c2 1006 SMART SM00487 469 659 3.7E-34 T 15-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Trad_0139 f691e4ad6f397f0872bebb59398d25c2 1006 Gene3D G3DSA:3.30.920.40 81 162 8.6E-8 T 15-10-2018 Trad_0139 f691e4ad6f397f0872bebb59398d25c2 1006 SUPERFAMILY SSF52540 494 849 1.18E-36 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_0139 f691e4ad6f397f0872bebb59398d25c2 1006 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 292 943 1.1E-261 T 15-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 Trad_0139 f691e4ad6f397f0872bebb59398d25c2 1006 Pfam PF02559 CarD-like/TRCF domain 349 444 4.4E-23 T 15-10-2018 IPR003711 CarD-like/TRCF domain Trad_0139 f691e4ad6f397f0872bebb59398d25c2 1006 Pfam PF00271 Helicase conserved C-terminal domain 701 778 7.5E-12 T 15-10-2018 IPR001650 Helicase, C-terminal Trad_0139 f691e4ad6f397f0872bebb59398d25c2 1006 Gene3D G3DSA:2.30.30.840 352 410 1.8E-209 T 15-10-2018 Trad_0139 f691e4ad6f397f0872bebb59398d25c2 1006 SUPERFAMILY SSF52540 55 220 3.36E-12 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_0139 f691e4ad6f397f0872bebb59398d25c2 1006 SUPERFAMILY SSF141259 342 417 1.16E-19 T 15-10-2018 IPR036101 CarD-like/TRCF domain superfamily Trad_0139 f691e4ad6f397f0872bebb59398d25c2 1006 SMART SM00490 695 779 3.3E-13 T 15-10-2018 IPR001650 Helicase, C-terminal Trad_0139 f691e4ad6f397f0872bebb59398d25c2 1006 SUPERFAMILY SSF143517 855 959 4.58E-24 T 15-10-2018 IPR037235 TRCF-like, C-terminal domain Trad_0785 a870183e08e502f9475ee7f359554d07 305 Hamap MF_00361 NAD kinase [nadK]. 23 294 28.764 T 15-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 Trad_0785 a870183e08e502f9475ee7f359554d07 305 Gene3D G3DSA:2.60.200.30 135 272 5.2E-71 T 15-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 Trad_0785 a870183e08e502f9475ee7f359554d07 305 Pfam PF01513 ATP-NAD kinase 67 278 3.7E-47 T 15-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 Trad_0785 a870183e08e502f9475ee7f359554d07 305 Gene3D G3DSA:3.40.50.10330 63 294 5.2E-71 T 15-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 Trad_0785 a870183e08e502f9475ee7f359554d07 305 SUPERFAMILY SSF111331 25 295 7.33E-66 T 15-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily Trad_1627 a12c539e0af7d0711a2f7ff067e313ea 286 Gene3D G3DSA:3.20.20.100 1 286 1.5E-118 T 15-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Trad_1627 a12c539e0af7d0711a2f7ff067e313ea 286 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 123 140 - T 15-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 Trad_1627 a12c539e0af7d0711a2f7ff067e313ea 286 SUPERFAMILY SSF51430 7 265 2.62E-91 T 15-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Trad_1627 a12c539e0af7d0711a2f7ff067e313ea 286 PIRSF PIRSF000097 2 118 3.5E-38 T 15-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Trad_1627 a12c539e0af7d0711a2f7ff067e313ea 286 PIRSF PIRSF000097 114 274 2.1E-42 T 15-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Trad_1627 a12c539e0af7d0711a2f7ff067e313ea 286 PRINTS PR00069 Aldo-keto reductase signature 196 220 2.2E-44 T 15-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Trad_1627 a12c539e0af7d0711a2f7ff067e313ea 286 PRINTS PR00069 Aldo-keto reductase signature 123 140 2.2E-44 T 15-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Trad_1627 a12c539e0af7d0711a2f7ff067e313ea 286 PRINTS PR00069 Aldo-keto reductase signature 94 112 2.2E-44 T 15-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Trad_1627 a12c539e0af7d0711a2f7ff067e313ea 286 PRINTS PR00069 Aldo-keto reductase signature 157 186 2.2E-44 T 15-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Trad_1627 a12c539e0af7d0711a2f7ff067e313ea 286 PRINTS PR00069 Aldo-keto reductase signature 38 62 2.2E-44 T 15-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Trad_1627 a12c539e0af7d0711a2f7ff067e313ea 286 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 42 59 - T 15-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 Trad_1627 a12c539e0af7d0711a2f7ff067e313ea 286 Pfam PF00248 Aldo/keto reductase family 25 257 1.7E-45 T 15-10-2018 IPR023210 NADP-dependent oxidoreductase domain Trad_1060 56baa98a4cf7706cbd0120877ce09437 264 Hamap MF_01974 Methionine aminopeptidase [map]. 1 247 38.037 T 15-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 Trad_1060 56baa98a4cf7706cbd0120877ce09437 264 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 164 182 - T 15-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 Trad_1060 56baa98a4cf7706cbd0120877ce09437 264 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 2 246 1.2E-89 T 15-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 Trad_1060 56baa98a4cf7706cbd0120877ce09437 264 Pfam PF00557 Metallopeptidase family M24 11 238 7.6E-51 T 15-10-2018 IPR000994 Peptidase M24 Trad_1060 56baa98a4cf7706cbd0120877ce09437 264 Gene3D G3DSA:3.90.230.10 1 252 3.8E-98 T 15-10-2018 Trad_1060 56baa98a4cf7706cbd0120877ce09437 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 66 79 3.1E-21 T 15-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Trad_1060 56baa98a4cf7706cbd0120877ce09437 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 88 104 3.1E-21 T 15-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Trad_1060 56baa98a4cf7706cbd0120877ce09437 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 158 170 3.1E-21 T 15-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Trad_1060 56baa98a4cf7706cbd0120877ce09437 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 189 201 3.1E-21 T 15-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Trad_1060 56baa98a4cf7706cbd0120877ce09437 264 SUPERFAMILY SSF55920 3 246 1.44E-81 T 15-10-2018 IPR036005 Creatinase/aminopeptidase-like Trad_2706 a4ec7e3b0bd8bd5e6b701a739b8b7acd 497 Pfam PF01565 FAD binding domain 44 149 1.1E-18 T 15-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 Trad_2706 a4ec7e3b0bd8bd5e6b701a739b8b7acd 497 SUPERFAMILY SSF56176 42 228 3.15E-27 T 15-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Trad_2706 a4ec7e3b0bd8bd5e6b701a739b8b7acd 497 Gene3D G3DSA:3.30.465.10 74 173 7.2E-9 T 15-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 Trad_2706 a4ec7e3b0bd8bd5e6b701a739b8b7acd 497 Gene3D G3DSA:3.30.465.10 188 230 6.1E-7 T 15-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 Trad_0243 63403bd99351c01e490933be35399fb0 255 Gene3D G3DSA:3.40.50.720 6 253 6.0E-88 T 15-10-2018 Trad_0243 63403bd99351c01e490933be35399fb0 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 2.3E-47 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_0243 63403bd99351c01e490933be35399fb0 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 2.3E-47 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_0243 63403bd99351c01e490933be35399fb0 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 2.3E-47 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_0243 63403bd99351c01e490933be35399fb0 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 2.3E-47 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_0243 63403bd99351c01e490933be35399fb0 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 2.3E-47 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_0243 63403bd99351c01e490933be35399fb0 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 2.3E-47 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_0243 63403bd99351c01e490933be35399fb0 255 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 15-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Trad_0243 63403bd99351c01e490933be35399fb0 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 2.3E-11 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_0243 63403bd99351c01e490933be35399fb0 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 2.3E-11 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_0243 63403bd99351c01e490933be35399fb0 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 2.3E-11 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_0243 63403bd99351c01e490933be35399fb0 255 SUPERFAMILY SSF51735 7 253 3.02E-85 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_0243 63403bd99351c01e490933be35399fb0 255 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 253 9.2E-70 T 15-10-2018 Trad_0243 63403bd99351c01e490933be35399fb0 255 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 189 2.3E-5 T 15-10-2018 Trad_1484 f19587da1b4763f806bb1d5741762154 351 Gene3D G3DSA:3.40.50.2300 27 325 2.5E-133 T 15-10-2018 Trad_1484 f19587da1b4763f806bb1d5741762154 351 SUPERFAMILY SSF53822 24 338 6.48E-70 T 15-10-2018 IPR028082 Periplasmic binding protein-like I Trad_1484 f19587da1b4763f806bb1d5741762154 351 Gene3D G3DSA:3.40.50.2300 129 346 2.5E-133 T 15-10-2018 Trad_1484 f19587da1b4763f806bb1d5741762154 351 Pfam PF13407 Periplasmic binding protein domain 27 304 2.6E-64 T 15-10-2018 IPR025997 Periplasmic binding protein Trad_1402 d290b16ed0a49faef4514578584bc12e 145 Pfam PF01850 PIN domain 2 133 3.8E-9 T 15-10-2018 IPR002716 PIN domain Trad_1402 d290b16ed0a49faef4514578584bc12e 145 TIGRFAM TIGR00028 Mtu_PIN_fam: toxin-antitoxin system PIN domain toxin 2 142 6.8E-43 T 15-10-2018 IPR006226 PIN domain toxin GO:0016788 Trad_1402 d290b16ed0a49faef4514578584bc12e 145 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 2 139 15.343 T 15-10-2018 IPR022907 VapC family GO:0004540 Trad_1402 d290b16ed0a49faef4514578584bc12e 145 Gene3D G3DSA:3.40.50.1010 3 139 1.3E-8 T 15-10-2018 Trad_1402 d290b16ed0a49faef4514578584bc12e 145 SUPERFAMILY SSF88723 2 139 3.92E-17 T 15-10-2018 IPR029060 PIN-like domain superfamily Trad_1355 18512eb8893888f2e6233066619f3e21 439 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 33 419 4.8E-143 T 15-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Trad_1355 18512eb8893888f2e6233066619f3e21 439 PRINTS PR00083 Histidinol dehydrogenase signature 313 338 8.7E-81 T 15-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Trad_1355 18512eb8893888f2e6233066619f3e21 439 PRINTS PR00083 Histidinol dehydrogenase signature 246 265 8.7E-81 T 15-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Trad_1355 18512eb8893888f2e6233066619f3e21 439 PRINTS PR00083 Histidinol dehydrogenase signature 130 156 8.7E-81 T 15-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Trad_1355 18512eb8893888f2e6233066619f3e21 439 PRINTS PR00083 Histidinol dehydrogenase signature 354 372 8.7E-81 T 15-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Trad_1355 18512eb8893888f2e6233066619f3e21 439 PRINTS PR00083 Histidinol dehydrogenase signature 165 191 8.7E-81 T 15-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Trad_1355 18512eb8893888f2e6233066619f3e21 439 PRINTS PR00083 Histidinol dehydrogenase signature 33 57 8.7E-81 T 15-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Trad_1355 18512eb8893888f2e6233066619f3e21 439 PRINTS PR00083 Histidinol dehydrogenase signature 195 220 8.7E-81 T 15-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Trad_1355 18512eb8893888f2e6233066619f3e21 439 PRINTS PR00083 Histidinol dehydrogenase signature 224 245 8.7E-81 T 15-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Trad_1355 18512eb8893888f2e6233066619f3e21 439 PIRSF PIRSF000099 12 423 4.4E-148 T 15-10-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Trad_1355 18512eb8893888f2e6233066619f3e21 439 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 6 420 38.352 T 15-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Trad_1355 18512eb8893888f2e6233066619f3e21 439 SUPERFAMILY SSF53720 27 420 1.63E-67 T 15-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Trad_1355 18512eb8893888f2e6233066619f3e21 439 Gene3D G3DSA:3.40.50.1980 30 227 7.2E-109 T 15-10-2018 Trad_1355 18512eb8893888f2e6233066619f3e21 439 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 224 256 - T 15-10-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 Trad_1355 18512eb8893888f2e6233066619f3e21 439 Gene3D G3DSA:3.40.50.1980 228 342 7.2E-109 T 15-10-2018 Trad_1355 18512eb8893888f2e6233066619f3e21 439 Pfam PF00815 Histidinol dehydrogenase 21 420 7.6E-146 T 15-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Trad_2933 b521ad972aa7d80730488fb9373fb0b4 495 Gene3D G3DSA:2.40.10.120 114 308 4.0E-31 T 15-10-2018 Trad_2933 b521ad972aa7d80730488fb9373fb0b4 495 Gene3D G3DSA:2.30.42.10 377 491 3.3E-18 T 15-10-2018 Trad_2933 b521ad972aa7d80730488fb9373fb0b4 495 SMART SM00228 375 477 1.1E-6 T 15-10-2018 IPR001478 PDZ domain GO:0005515 Trad_2933 b521ad972aa7d80730488fb9373fb0b4 495 PRINTS PR00834 HtrA/DegQ protease family signature 186 206 1.1E-12 T 15-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Trad_2933 b521ad972aa7d80730488fb9373fb0b4 495 PRINTS PR00834 HtrA/DegQ protease family signature 159 171 1.1E-12 T 15-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Trad_2933 b521ad972aa7d80730488fb9373fb0b4 495 PRINTS PR00834 HtrA/DegQ protease family signature 230 254 1.1E-12 T 15-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Trad_2933 b521ad972aa7d80730488fb9373fb0b4 495 PRINTS PR00834 HtrA/DegQ protease family signature 287 304 1.1E-12 T 15-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Trad_2933 b521ad972aa7d80730488fb9373fb0b4 495 PRINTS PR00834 HtrA/DegQ protease family signature 265 282 1.1E-12 T 15-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Trad_2933 b521ad972aa7d80730488fb9373fb0b4 495 Pfam PF13365 Trypsin-like peptidase domain 150 294 3.0E-24 T 15-10-2018 Trad_2933 b521ad972aa7d80730488fb9373fb0b4 495 SUPERFAMILY SSF50494 122 305 6.43E-33 T 15-10-2018 IPR009003 Peptidase S1, PA clan Trad_2933 b521ad972aa7d80730488fb9373fb0b4 495 Pfam PF13180 PDZ domain 399 486 2.1E-10 T 15-10-2018 IPR001478 PDZ domain GO:0005515 Trad_2933 b521ad972aa7d80730488fb9373fb0b4 495 SUPERFAMILY SSF50156 390 487 2.63E-13 T 15-10-2018 IPR036034 PDZ superfamily GO:0005515 Trad_2859 be203ffb706416aa9049ab94f611f581 352 Gene3D G3DSA:3.40.50.2000 90 343 4.1E-47 T 15-10-2018 Trad_2859 be203ffb706416aa9049ab94f611f581 352 Pfam PF00534 Glycosyl transferases group 1 179 327 7.7E-29 T 15-10-2018 IPR001296 Glycosyl transferase, family 1 Trad_2859 be203ffb706416aa9049ab94f611f581 352 Gene3D G3DSA:3.40.50.2000 161 330 4.1E-47 T 15-10-2018 Trad_2859 be203ffb706416aa9049ab94f611f581 352 SUPERFAMILY SSF53756 12 350 4.19E-62 T 15-10-2018 Trad_1666 debd30cb251f95d9c72f02d297daee09 271 TIGRFAM TIGR02580 cas_RAMP_Cmr4: CRISPR type III-B/RAMP module RAMP protein Cmr4 9 264 4.5E-58 T 15-10-2018 IPR013410 CRISPR-associated RAMP Cmr4 Trad_1666 debd30cb251f95d9c72f02d297daee09 271 Pfam PF03787 RAMP superfamily 12 264 2.1E-18 T 15-10-2018 IPR005537 CRISPR type III-associated RAMP protein Trad_2424 74476a9602c803260682e6f23dbb920b 182 Pfam PF13115 YtkA-like 34 106 2.9E-6 T 15-10-2018 IPR032693 YtkA-like domain Trad_1746 6845c497b8898cbbe31c7dbb86eb5a70 101 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 7 95 1.7E-19 T 15-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like Trad_2700 aa253f225b08bb335f612141da4441c1 240 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 15-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Trad_2700 aa253f225b08bb335f612141da4441c1 240 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 1.6E-8 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2700 aa253f225b08bb335f612141da4441c1 240 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 1.6E-8 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2700 aa253f225b08bb335f612141da4441c1 240 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 1.6E-8 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2700 aa253f225b08bb335f612141da4441c1 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 3.2E-26 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2700 aa253f225b08bb335f612141da4441c1 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 3.2E-26 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2700 aa253f225b08bb335f612141da4441c1 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 3.2E-26 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2700 aa253f225b08bb335f612141da4441c1 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 3.2E-26 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2700 aa253f225b08bb335f612141da4441c1 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 3.2E-26 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2700 aa253f225b08bb335f612141da4441c1 240 Gene3D G3DSA:3.40.50.720 2 234 3.1E-67 T 15-10-2018 Trad_2700 aa253f225b08bb335f612141da4441c1 240 SUPERFAMILY SSF51735 1 223 4.25E-67 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_2700 aa253f225b08bb335f612141da4441c1 240 Pfam PF00106 short chain dehydrogenase 8 197 1.8E-55 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2700 aa253f225b08bb335f612141da4441c1 240 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 193 2.1E-4 T 15-10-2018 Trad_2991 b8098ad761af9a25d69eae845861e5dc 292 Gene3D G3DSA:1.10.10.2830 102 213 6.3E-41 T 15-10-2018 Trad_2991 b8098ad761af9a25d69eae845861e5dc 292 Pfam PF02195 ParB-like nuclease domain 27 114 2.3E-23 T 15-10-2018 IPR003115 ParB/Sulfiredoxin Trad_2991 b8098ad761af9a25d69eae845861e5dc 292 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 23 189 3.4E-50 T 15-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 Trad_2991 b8098ad761af9a25d69eae845861e5dc 292 SMART SM00470 26 115 2.2E-30 T 15-10-2018 IPR003115 ParB/Sulfiredoxin Trad_2991 b8098ad761af9a25d69eae845861e5dc 292 SUPERFAMILY SSF110849 26 117 1.18E-26 T 15-10-2018 IPR036086 ParB/Sulfiredoxin superfamily Trad_2991 b8098ad761af9a25d69eae845861e5dc 292 Gene3D G3DSA:3.90.1530.30 39 101 6.3E-26 T 15-10-2018 Trad_2991 b8098ad761af9a25d69eae845861e5dc 292 SUPERFAMILY SSF109709 107 211 1.52E-32 T 15-10-2018 Trad_0225 b41b52cb1bbb1a5278ac261d033fd54f 362 Gene3D G3DSA:3.20.20.70 10 361 2.0E-131 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Trad_0225 b41b52cb1bbb1a5278ac261d033fd54f 362 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 278 294 2.6E-57 T 15-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Trad_0225 b41b52cb1bbb1a5278ac261d033fd54f 362 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 303 318 2.6E-57 T 15-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Trad_0225 b41b52cb1bbb1a5278ac261d033fd54f 362 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 144 158 2.6E-57 T 15-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Trad_0225 b41b52cb1bbb1a5278ac261d033fd54f 362 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 178 197 2.6E-57 T 15-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Trad_0225 b41b52cb1bbb1a5278ac261d033fd54f 362 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 216 235 2.6E-57 T 15-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Trad_0225 b41b52cb1bbb1a5278ac261d033fd54f 362 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 333 352 2.6E-57 T 15-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Trad_0225 b41b52cb1bbb1a5278ac261d033fd54f 362 PIRSF PIRSF001415 19 360 1.4E-129 T 15-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Trad_0225 b41b52cb1bbb1a5278ac261d033fd54f 362 SUPERFAMILY SSF51569 22 356 1.11E-121 T 15-10-2018 Trad_0225 b41b52cb1bbb1a5278ac261d033fd54f 362 Pfam PF00490 Delta-aminolevulinic acid dehydratase 26 356 1.5E-128 T 15-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Trad_0225 b41b52cb1bbb1a5278ac261d033fd54f 362 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 278 290 - T 15-10-2018 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Trad_0225 b41b52cb1bbb1a5278ac261d033fd54f 362 SMART SM01004 23 359 5.5E-188 T 15-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Trad_2507 aa7d43c5a8241a53d3a875cde42098b9 234 Gene3D G3DSA:3.40.50.450 24 223 2.2E-71 T 15-10-2018 Trad_2507 aa7d43c5a8241a53d3a875cde42098b9 234 Pfam PF03641 Possible lysine decarboxylase 89 218 3.2E-34 T 15-10-2018 IPR031100 LOG family Trad_2507 aa7d43c5a8241a53d3a875cde42098b9 234 SUPERFAMILY SSF102405 17 219 2.75E-64 T 15-10-2018 Trad_2507 aa7d43c5a8241a53d3a875cde42098b9 234 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 46 222 2.1E-49 T 15-10-2018 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG Trad_1180 0c51477b923a6825c46919348af5378a 200 TIGRFAM TIGR00277 HDIG: HDIG domain 27 100 1.4E-11 T 15-10-2018 IPR006675 HDIG domain Trad_1180 0c51477b923a6825c46919348af5378a 200 Pfam PF01966 HD domain 31 122 3.9E-10 T 15-10-2018 IPR006674 HD domain Trad_1180 0c51477b923a6825c46919348af5378a 200 SUPERFAMILY SSF109604 26 137 2.04E-19 T 15-10-2018 Trad_1180 0c51477b923a6825c46919348af5378a 200 Gene3D G3DSA:1.10.3210.10 15 160 1.9E-11 T 15-10-2018 Trad_1180 0c51477b923a6825c46919348af5378a 200 SMART SM00471 25 134 0.0066 T 15-10-2018 IPR003607 HD/PDEase domain Trad_1416 9459cbc61f1df078de7bcb5d6bc62daf 359 Gene3D G3DSA:2.40.50.940 237 358 1.4E-17 T 15-10-2018 Trad_1416 9459cbc61f1df078de7bcb5d6bc62daf 359 Gene3D G3DSA:2.40.50.140 294 349 1.4E-17 T 15-10-2018 Trad_1416 9459cbc61f1df078de7bcb5d6bc62daf 359 Gene3D G3DSA:3.40.50.300 18 236 2.5E-68 T 15-10-2018 Trad_1416 9459cbc61f1df078de7bcb5d6bc62daf 359 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Trad_1416 9459cbc61f1df078de7bcb5d6bc62daf 359 SMART SM00382 43 226 6.7E-17 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_1416 9459cbc61f1df078de7bcb5d6bc62daf 359 Pfam PF00005 ABC transporter 34 176 3.1E-34 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Trad_1416 9459cbc61f1df078de7bcb5d6bc62daf 359 SUPERFAMILY SSF52540 19 257 9.51E-86 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_1416 9459cbc61f1df078de7bcb5d6bc62daf 359 SUPERFAMILY SSF50331 253 358 2.98E-14 T 15-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal Trad_1416 9459cbc61f1df078de7bcb5d6bc62daf 359 Pfam PF08402 TOBE domain 287 357 9.8E-10 T 15-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 Trad_0847 74decec68eb14c6de96e408c20eea836 455 PRINTS PR00757 Flavin-containing amine oxidase signature 381 400 4.0E-26 T 15-10-2018 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 Trad_0847 74decec68eb14c6de96e408c20eea836 455 PRINTS PR00757 Flavin-containing amine oxidase signature 9 28 4.0E-26 T 15-10-2018 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 Trad_0847 74decec68eb14c6de96e408c20eea836 455 PRINTS PR00757 Flavin-containing amine oxidase signature 402 424 4.0E-26 T 15-10-2018 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 Trad_0847 74decec68eb14c6de96e408c20eea836 455 PRINTS PR00757 Flavin-containing amine oxidase signature 186 207 4.0E-26 T 15-10-2018 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 Trad_0847 74decec68eb14c6de96e408c20eea836 455 PRINTS PR00757 Flavin-containing amine oxidase signature 433 450 4.0E-26 T 15-10-2018 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 Trad_0847 74decec68eb14c6de96e408c20eea836 455 PRINTS PR00757 Flavin-containing amine oxidase signature 298 317 4.0E-26 T 15-10-2018 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 Trad_0847 74decec68eb14c6de96e408c20eea836 455 Gene3D G3DSA:3.50.50.60 9 451 4.6E-141 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Trad_0847 74decec68eb14c6de96e408c20eea836 455 Gene3D G3DSA:3.90.660.10 45 403 4.6E-141 T 15-10-2018 Trad_0847 74decec68eb14c6de96e408c20eea836 455 SUPERFAMILY SSF51905 6 454 1.19E-57 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Trad_0847 74decec68eb14c6de96e408c20eea836 455 SUPERFAMILY SSF54373 294 401 1.57E-29 T 15-10-2018 Trad_0847 74decec68eb14c6de96e408c20eea836 455 Pfam PF01593 Flavin containing amine oxidoreductase 17 451 9.4E-70 T 15-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 Trad_0430 71852bb9600de90059c65ee70b016ce0 487 Pfam PF09670 CRISPR-associated protein (Cas_Cas02710) 66 466 3.2E-67 T 15-10-2018 Trad_0430 71852bb9600de90059c65ee70b016ce0 487 TIGRFAM TIGR02710 TIGR02710: CRISPR-associated protein, TIGR02710 family 68 467 1.9E-36 T 15-10-2018 IPR014082 CRISPR-associated protein, Cas02710 Trad_0430 71852bb9600de90059c65ee70b016ce0 487 SUPERFAMILY SSF52980 58 168 9.12E-6 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 Trad_1759 db963ae0953c4448e23a43c0cd00b0ee 362 PIRSF PIRSF001220 16 354 1.2E-81 T 15-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 Trad_1759 db963ae0953c4448e23a43c0cd00b0ee 362 Pfam PF00710 Asparaginase, N-terminal 22 211 5.9E-57 T 15-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 Trad_1759 db963ae0953c4448e23a43c0cd00b0ee 362 SMART SM00870 21 343 5.2E-116 T 15-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 Trad_1759 db963ae0953c4448e23a43c0cd00b0ee 362 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 24 32 - T 15-10-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 Trad_1759 db963ae0953c4448e23a43c0cd00b0ee 362 Gene3D G3DSA:3.40.50.40 228 360 3.2E-46 T 15-10-2018 IPR027473 L-asparaginase, C-terminal Reactome: R-HSA-70614 Trad_1759 db963ae0953c4448e23a43c0cd00b0ee 362 PIRSF PIRSF500176 18 352 4.4E-94 T 15-10-2018 Trad_1759 db963ae0953c4448e23a43c0cd00b0ee 362 TIGRFAM TIGR00519 asnASE_I: L-asparaginase, type I 20 355 6.7E-88 T 15-10-2018 IPR006033 L-asparaginase, type I GO:0004067|GO:0006520 Reactome: R-HSA-70614 Trad_1759 db963ae0953c4448e23a43c0cd00b0ee 362 Gene3D G3DSA:3.40.50.1170 15 225 1.2E-73 T 15-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 Trad_1759 db963ae0953c4448e23a43c0cd00b0ee 362 PRINTS PR00139 Asparaginase/glutaminase family signature 22 33 3.5E-17 T 15-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 Trad_1759 db963ae0953c4448e23a43c0cd00b0ee 362 PRINTS PR00139 Asparaginase/glutaminase family signature 102 120 3.5E-17 T 15-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 Trad_1759 db963ae0953c4448e23a43c0cd00b0ee 362 PRINTS PR00139 Asparaginase/glutaminase family signature 280 298 3.5E-17 T 15-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 Trad_1759 db963ae0953c4448e23a43c0cd00b0ee 362 SUPERFAMILY SSF53774 20 355 4.32E-101 T 15-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 Trad_1759 db963ae0953c4448e23a43c0cd00b0ee 362 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 103 113 - T 15-10-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 Trad_1950 a5c8bf14c2cc681bb1b4e10a35855377 381 SUPERFAMILY SSF53756 2 367 5.93E-85 T 15-10-2018 Trad_1950 a5c8bf14c2cc681bb1b4e10a35855377 381 Pfam PF13439 Glycosyltransferase Family 4 15 179 6.4E-25 T 15-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Trad_1950 a5c8bf14c2cc681bb1b4e10a35855377 381 Pfam PF00534 Glycosyl transferases group 1 199 347 3.6E-30 T 15-10-2018 IPR001296 Glycosyl transferase, family 1 Trad_1950 a5c8bf14c2cc681bb1b4e10a35855377 381 Gene3D G3DSA:3.40.50.2000 12 365 2.2E-69 T 15-10-2018 Trad_1950 a5c8bf14c2cc681bb1b4e10a35855377 381 Gene3D G3DSA:3.40.50.2000 176 352 2.2E-69 T 15-10-2018 Trad_2668 51a63fa5aeca141377b570a1731395ed 227 Gene3D G3DSA:3.40.50.12740 8 221 5.3E-72 T 15-10-2018 Trad_2668 51a63fa5aeca141377b570a1731395ed 227 Pfam PF00196 Bacterial regulatory proteins, luxR family 160 215 5.0E-20 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Trad_2668 51a63fa5aeca141377b570a1731395ed 227 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 175 191 6.6E-13 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Trad_2668 51a63fa5aeca141377b570a1731395ed 227 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 161 175 6.6E-13 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Trad_2668 51a63fa5aeca141377b570a1731395ed 227 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 191 203 6.6E-13 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Trad_2668 51a63fa5aeca141377b570a1731395ed 227 SMART SM00421 158 215 2.7E-22 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Trad_2668 51a63fa5aeca141377b570a1731395ed 227 SUPERFAMILY SSF52172 9 137 2.28E-34 T 15-10-2018 IPR011006 CheY-like superfamily Trad_2668 51a63fa5aeca141377b570a1731395ed 227 Pfam PF00072 Response regulator receiver domain 11 122 2.4E-30 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Trad_2668 51a63fa5aeca141377b570a1731395ed 227 SUPERFAMILY SSF46894 147 220 2.07E-21 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Trad_2668 51a63fa5aeca141377b570a1731395ed 227 SMART SM00448 8 121 4.3E-33 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Trad_0207 287831da4f8afd7eb38a040aa651a363 512 SUPERFAMILY SSF110921 389 496 9.55E-24 T 15-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Trad_0207 287831da4f8afd7eb38a040aa651a363 512 Pfam PF08502 LeuA allosteric (dimerisation) domain 368 497 1.3E-34 T 15-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Trad_0207 287831da4f8afd7eb38a040aa651a363 512 SMART SM00917 368 498 2.0E-36 T 15-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Trad_0207 287831da4f8afd7eb38a040aa651a363 512 SUPERFAMILY SSF51569 3 290 3.11E-97 T 15-10-2018 Trad_0207 287831da4f8afd7eb38a040aa651a363 512 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 11 27 - T 15-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Trad_0207 287831da4f8afd7eb38a040aa651a363 512 Gene3D G3DSA:3.20.20.70 1 275 7.5E-107 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Trad_0207 287831da4f8afd7eb38a040aa651a363 512 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 198 211 - T 15-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Trad_0207 287831da4f8afd7eb38a040aa651a363 512 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 1 507 42.226 T 15-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Trad_0207 287831da4f8afd7eb38a040aa651a363 512 Pfam PF00682 HMGL-like 4 272 3.3E-94 T 15-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 Trad_0207 287831da4f8afd7eb38a040aa651a363 512 Gene3D G3DSA:1.10.238.260 279 393 2.7E-35 T 15-10-2018 Trad_0207 287831da4f8afd7eb38a040aa651a363 512 Gene3D G3DSA:3.30.160.270 394 499 2.6E-8 T 15-10-2018 Trad_0207 287831da4f8afd7eb38a040aa651a363 512 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 4 495 1.2E-211 T 15-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Trad_0925 daea3948042cec6d9fc2d0bc442011f6 352 Gene3D G3DSA:3.40.190.10 108 218 1.6E-54 T 15-10-2018 Trad_0925 daea3948042cec6d9fc2d0bc442011f6 352 SUPERFAMILY SSF53850 34 337 1.6E-23 T 15-10-2018 Trad_0925 daea3948042cec6d9fc2d0bc442011f6 352 Gene3D G3DSA:3.40.190.10 30 324 1.6E-54 T 15-10-2018 Trad_0925 daea3948042cec6d9fc2d0bc442011f6 352 Pfam PF09084 NMT1/THI5 like 38 266 8.5E-36 T 15-10-2018 IPR015168 SsuA/THI5-like Trad_2280 9067f7a0183f63dc8d706cbf6c823bb7 383 SUPERFAMILY SSF161098 132 371 2.35E-44 T 15-10-2018 IPR035906 MetI-like superfamily Trad_2280 9067f7a0183f63dc8d706cbf6c823bb7 383 Gene3D G3DSA:1.10.3720.10 125 380 3.6E-59 T 15-10-2018 IPR035906 MetI-like superfamily Trad_2280 9067f7a0183f63dc8d706cbf6c823bb7 383 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 154 380 3.6E-17 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Trad_2895 fdd7ff544830824984f729a2ec08ba22 342 Gene3D G3DSA:3.90.180.10 10 327 1.6E-126 T 15-10-2018 Trad_2895 fdd7ff544830824984f729a2ec08ba22 342 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 135 4.8E-34 T 15-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Trad_2895 fdd7ff544830824984f729a2ec08ba22 342 SMART SM00829 7 340 4.6E-7 T 15-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Trad_2895 fdd7ff544830824984f729a2ec08ba22 342 Gene3D G3DSA:3.40.50.720 152 288 1.6E-126 T 15-10-2018 Trad_2895 fdd7ff544830824984f729a2ec08ba22 342 Pfam PF00107 Zinc-binding dehydrogenase 175 302 1.4E-27 T 15-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Trad_2895 fdd7ff544830824984f729a2ec08ba22 342 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 61 75 - T 15-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 Trad_2895 fdd7ff544830824984f729a2ec08ba22 342 SUPERFAMILY SSF50129 1 173 3.65E-63 T 15-10-2018 IPR011032 GroES-like superfamily Trad_2895 fdd7ff544830824984f729a2ec08ba22 342 SUPERFAMILY SSF51735 140 305 9.2E-41 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_1020 2b979ef8e2b74d0cdeaa39b730016fa7 1011 Pfam PF03714 Bacterial pullanase-associated domain 33 126 4.6E-24 T 15-10-2018 IPR005323 Pullulanase, carbohydrate-binding module 41 GO:0005975|GO:0030246 Trad_1020 2b979ef8e2b74d0cdeaa39b730016fa7 1011 Gene3D G3DSA:2.60.40.10 258 366 3.8E-31 T 15-10-2018 IPR013783 Immunoglobulin-like fold Trad_1020 2b979ef8e2b74d0cdeaa39b730016fa7 1011 SUPERFAMILY SSF49452 27 126 6.54E-33 T 15-10-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 Trad_1020 2b979ef8e2b74d0cdeaa39b730016fa7 1011 TIGRFAM TIGR02103 pullul_strch: alpha-1,6-glucosidases, pullulanase-type 140 1007 0.0 T 15-10-2018 IPR011839 Alpha-1,6-glucosidases, pullulanase-type GO:0005975|GO:0051060 Trad_1020 2b979ef8e2b74d0cdeaa39b730016fa7 1011 Pfam PF11852 Domain of unknown function (DUF3372) 847 1007 4.7E-57 T 15-10-2018 IPR024561 Alpha-1,6-glucosidases, pullulanase-type, C-terminal Trad_1020 2b979ef8e2b74d0cdeaa39b730016fa7 1011 Gene3D G3DSA:3.20.20.80 367 937 3.6E-241 T 15-10-2018 Trad_1020 2b979ef8e2b74d0cdeaa39b730016fa7 1011 Gene3D G3DSA:2.60.40.1180 938 1009 5.2E-20 T 15-10-2018 IPR013780 Glycosyl hydrolase, all-beta Trad_1020 2b979ef8e2b74d0cdeaa39b730016fa7 1011 SUPERFAMILY SSF51445 364 905 1.44E-131 T 15-10-2018 IPR017853 Glycoside hydrolase superfamily Trad_1020 2b979ef8e2b74d0cdeaa39b730016fa7 1011 SUPERFAMILY SSF81296 134 257 3.22E-31 T 15-10-2018 IPR014756 Immunoglobulin E-set Trad_1020 2b979ef8e2b74d0cdeaa39b730016fa7 1011 Gene3D G3DSA:2.60.40.1110 24 128 6.8E-31 T 15-10-2018 Trad_1020 2b979ef8e2b74d0cdeaa39b730016fa7 1011 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 266 352 3.3E-12 T 15-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 Trad_1020 2b979ef8e2b74d0cdeaa39b730016fa7 1011 SUPERFAMILY SSF81296 262 370 6.16E-23 T 15-10-2018 IPR014756 Immunoglobulin E-set Trad_1020 2b979ef8e2b74d0cdeaa39b730016fa7 1011 SUPERFAMILY SSF51011 908 1009 3.09E-25 T 15-10-2018 Trad_1020 2b979ef8e2b74d0cdeaa39b730016fa7 1011 Gene3D G3DSA:2.60.40.1130 140 256 2.6E-33 T 15-10-2018 Trad_1248 d7758a42b59ea28eae9238ff82ec13f8 415 Pfam PF02653 Branched-chain amino acid transport system / permease component 57 399 5.6E-41 T 15-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Trad_2308 22c2f7f689cbd325b9d1c46e80781d72 392 Pfam PF09344 CT1975-like protein 4 380 2.3E-126 T 15-10-2018 IPR010148 CRISPR-associated protein, CT1975 Trad_2308 22c2f7f689cbd325b9d1c46e80781d72 392 TIGRFAM TIGR01869 casC_Cse4: CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI 3 350 1.1E-100 T 15-10-2018 IPR010148 CRISPR-associated protein, CT1975 Trad_2830 00825b2a98cfa260989c11212ec124b1 468 PIRSF PIRSF016636 1 468 9.3E-149 T 15-10-2018 IPR024194 Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB Trad_2830 00825b2a98cfa260989c11212ec124b1 468 Pfam PF03062 MBOAT, membrane-bound O-acyltransferase family 149 343 5.1E-27 T 15-10-2018 IPR004299 Membrane bound O-acyl transferase, MBOAT Trad_2830 00825b2a98cfa260989c11212ec124b1 468 PIRSF PIRSF500217 1 468 4.4E-150 T 15-10-2018 IPR028362 Alginate O-acetyltransferase AlgI GO:0042121 Trad_1405 563b612dd53c84f84c92905511df465a 293 Pfam PF00781 Diacylglycerol kinase catalytic domain 3 119 1.5E-16 T 15-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 Trad_1405 563b612dd53c84f84c92905511df465a 293 SMART SM00046 2 121 0.0018 T 15-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 Trad_1405 563b612dd53c84f84c92905511df465a 293 Gene3D G3DSA:3.40.50.10330 1 122 1.7E-19 T 15-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 Trad_1405 563b612dd53c84f84c92905511df465a 293 Gene3D G3DSA:2.60.200.40 123 276 6.2E-22 T 15-10-2018 Trad_1405 563b612dd53c84f84c92905511df465a 293 SUPERFAMILY SSF111331 2 291 8.67E-44 T 15-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily Trad_0111 719c2505827887d3b2b3866992ac4c96 299 Gene3D G3DSA:3.40.50.1980 143 280 3.5E-19 T 15-10-2018 Trad_0111 719c2505827887d3b2b3866992ac4c96 299 Gene3D G3DSA:3.40.50.1980 15 142 5.9E-32 T 15-10-2018 Trad_0111 719c2505827887d3b2b3866992ac4c96 299 Pfam PF01497 Periplasmic binding protein 21 255 3.4E-23 T 15-10-2018 IPR002491 ABC transporter periplasmic binding domain Trad_0111 719c2505827887d3b2b3866992ac4c96 299 SUPERFAMILY SSF53807 19 278 6.28E-43 T 15-10-2018 Trad_1030 b673a0bfe3f394001f2cd7d6ce67b4aa 377 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 9 360 2.1E-113 T 15-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 Trad_1030 b673a0bfe3f394001f2cd7d6ce67b4aa 377 SUPERFAMILY SSF56059 105 299 2.83E-57 T 15-10-2018 Trad_1030 b673a0bfe3f394001f2cd7d6ce67b4aa 377 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 9 360 39.6 T 15-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 Trad_1030 b673a0bfe3f394001f2cd7d6ce67b4aa 377 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 5 76 3.5E-6 T 15-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 Trad_1030 b673a0bfe3f394001f2cd7d6ce67b4aa 377 Pfam PF02222 ATP-grasp domain 115 282 2.2E-48 T 15-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type Trad_1030 b673a0bfe3f394001f2cd7d6ce67b4aa 377 Gene3D G3DSA:3.40.50.20 2 109 2.4E-38 T 15-10-2018 Trad_1030 b673a0bfe3f394001f2cd7d6ce67b4aa 377 Gene3D G3DSA:3.30.470.20 184 375 3.4E-69 T 15-10-2018 Trad_1030 b673a0bfe3f394001f2cd7d6ce67b4aa 377 SUPERFAMILY SSF52440 3 101 1.15E-24 T 15-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Trad_1030 b673a0bfe3f394001f2cd7d6ce67b4aa 377 Gene3D G3DSA:3.30.1490.20 110 183 1.4E-22 T 15-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Trad_1030 b673a0bfe3f394001f2cd7d6ce67b4aa 377 SUPERFAMILY SSF51246 306 373 8.63E-17 T 15-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 Trad_1030 b673a0bfe3f394001f2cd7d6ce67b4aa 377 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 10 37 - T 15-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 Trad_0978 76546800e247f3a9c585e48fcdb5176b 455 SMART SM00554 64 165 3.8E-29 T 15-10-2018 IPR000782 FAS1 domain Trad_0978 76546800e247f3a9c585e48fcdb5176b 455 SUPERFAMILY SSF82153 16 165 4.97E-35 T 15-10-2018 IPR036378 FAS1 domain superfamily Trad_0978 76546800e247f3a9c585e48fcdb5176b 455 Pfam PF07452 CHRD domain 312 443 1.0E-29 T 15-10-2018 IPR010895 CHRD Trad_0978 76546800e247f3a9c585e48fcdb5176b 455 Pfam PF07452 CHRD domain 169 299 1.7E-18 T 15-10-2018 IPR010895 CHRD Trad_0978 76546800e247f3a9c585e48fcdb5176b 455 Gene3D G3DSA:2.30.180.10 13 166 2.2E-39 T 15-10-2018 IPR036378 FAS1 domain superfamily Trad_0978 76546800e247f3a9c585e48fcdb5176b 455 Pfam PF02469 Fasciclin domain 40 164 1.6E-30 T 15-10-2018 IPR000782 FAS1 domain Trad_0978 76546800e247f3a9c585e48fcdb5176b 455 SMART SM00754 167 301 3.1E-15 T 15-10-2018 IPR010895 CHRD Trad_0978 76546800e247f3a9c585e48fcdb5176b 455 SMART SM00754 310 445 6.6E-27 T 15-10-2018 IPR010895 CHRD Trad_0706 21cdc8fbf94abab2ee14fb56d6b11522 299 SUPERFAMILY SSF53613 1 290 7.64E-79 T 15-10-2018 IPR029056 Ribokinase-like Trad_0706 21cdc8fbf94abab2ee14fb56d6b11522 299 Gene3D G3DSA:3.40.1190.20 1 296 5.8E-97 T 15-10-2018 IPR029056 Ribokinase-like Trad_0706 21cdc8fbf94abab2ee14fb56d6b11522 299 PRINTS PR00990 Ribokinase signature 102 115 1.2E-33 T 15-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 Trad_0706 21cdc8fbf94abab2ee14fb56d6b11522 299 PRINTS PR00990 Ribokinase signature 31 50 1.2E-33 T 15-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 Trad_0706 21cdc8fbf94abab2ee14fb56d6b11522 299 PRINTS PR00990 Ribokinase signature 210 221 1.2E-33 T 15-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 Trad_0706 21cdc8fbf94abab2ee14fb56d6b11522 299 PRINTS PR00990 Ribokinase signature 4 25 1.2E-33 T 15-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 Trad_0706 21cdc8fbf94abab2ee14fb56d6b11522 299 PRINTS PR00990 Ribokinase signature 168 183 1.2E-33 T 15-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 Trad_0706 21cdc8fbf94abab2ee14fb56d6b11522 299 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 239 252 - T 15-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 Trad_0706 21cdc8fbf94abab2ee14fb56d6b11522 299 Pfam PF00294 pfkB family carbohydrate kinase 2 287 1.7E-62 T 15-10-2018 IPR011611 Carbohydrate kinase PfkB Trad_0706 21cdc8fbf94abab2ee14fb56d6b11522 299 Hamap MF_01987 Ribokinase [rbsK]. 1 294 25.485 T 15-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 Trad_0706 21cdc8fbf94abab2ee14fb56d6b11522 299 TIGRFAM TIGR02152 D_ribokin_bact: ribokinase 2 292 4.5E-93 T 15-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 Trad_0454 452408db6b2f597af850060839cb956e 473 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 5 137 2.8E-38 T 15-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Trad_0454 452408db6b2f597af850060839cb956e 473 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 95 104 - T 15-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Trad_0454 452408db6b2f597af850060839cb956e 473 Gene3D G3DSA:3.40.120.10 1 167 3.4E-50 T 15-10-2018 Trad_0454 452408db6b2f597af850060839cb956e 473 Gene3D G3DSA:3.30.310.50 377 467 1.0E-21 T 15-10-2018 Trad_0454 452408db6b2f597af850060839cb956e 473 Gene3D G3DSA:3.40.120.10 176 259 8.2E-17 T 15-10-2018 Trad_0454 452408db6b2f597af850060839cb956e 473 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 157 256 1.2E-18 T 15-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Trad_0454 452408db6b2f597af850060839cb956e 473 SUPERFAMILY SSF53738 247 376 2.0E-29 T 15-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Trad_0454 452408db6b2f597af850060839cb956e 473 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 211 224 5.0E-9 T 15-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Trad_0454 452408db6b2f597af850060839cb956e 473 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 94 108 5.0E-9 T 15-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Trad_0454 452408db6b2f597af850060839cb956e 473 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 239 254 5.0E-9 T 15-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Trad_0454 452408db6b2f597af850060839cb956e 473 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 416 458 4.2E-8 T 15-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Trad_0454 452408db6b2f597af850060839cb956e 473 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 263 370 1.5E-25 T 15-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Trad_0454 452408db6b2f597af850060839cb956e 473 SUPERFAMILY SSF55957 399 467 3.14E-16 T 15-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Trad_0454 452408db6b2f597af850060839cb956e 473 Gene3D G3DSA:3.40.120.10 260 376 4.7E-40 T 15-10-2018 Trad_0454 452408db6b2f597af850060839cb956e 473 SUPERFAMILY SSF53738 2 181 2.16E-44 T 15-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Trad_0873 a81feff384c112a91e5c4534e4768553 273 Pfam PF05425 Copper resistance protein D 165 265 6.9E-19 T 15-10-2018 IPR008457 Copper resistance protein D GO:0016021 Trad_2020 d7d19c25e26ca8c323173e83d39a5d8f 336 SUPERFAMILY SSF103486 5 333 4.05E-58 T 15-10-2018 IPR036079 V-type ATP synthase subunit C-like Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 Trad_2020 d7d19c25e26ca8c323173e83d39a5d8f 336 Hamap MF_00314 V-type ATP synthase subunit C [atpC]. 1 335 21.877 T 15-10-2018 IPR014272 ATPase, V0 complex, c subunit GO:0033179|GO:0046961 Trad_2020 d7d19c25e26ca8c323173e83d39a5d8f 336 Gene3D G3DSA:1.20.1690.10 85 191 1.2E-81 T 15-10-2018 IPR035067 V-type ATPase subunit c Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 Trad_2020 d7d19c25e26ca8c323173e83d39a5d8f 336 Gene3D G3DSA:1.20.1690.10 192 294 1.2E-81 T 15-10-2018 IPR035067 V-type ATPase subunit c Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 Trad_2020 d7d19c25e26ca8c323173e83d39a5d8f 336 Gene3D G3DSA:1.10.132.50 5 328 1.2E-81 T 15-10-2018 Trad_2020 d7d19c25e26ca8c323173e83d39a5d8f 336 Pfam PF01992 ATP synthase (C/AC39) subunit 8 331 8.5E-59 T 15-10-2018 IPR002843 ATPase, V0 complex, c/d subunit Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 Trad_2270 6f2c9be86115e957cade29d39818d826 251 SUPERFAMILY SSF51735 2 250 3.18E-84 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_2270 6f2c9be86115e957cade29d39818d826 251 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 144 172 - T 15-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Trad_2270 6f2c9be86115e957cade29d39818d826 251 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 249 4.6E-72 T 15-10-2018 Trad_2270 6f2c9be86115e957cade29d39818d826 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 2.6E-44 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2270 6f2c9be86115e957cade29d39818d826 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 2.6E-44 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2270 6f2c9be86115e957cade29d39818d826 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 2.6E-44 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2270 6f2c9be86115e957cade29d39818d826 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 212 232 2.6E-44 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2270 6f2c9be86115e957cade29d39818d826 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 2.6E-44 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2270 6f2c9be86115e957cade29d39818d826 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 2.6E-44 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2270 6f2c9be86115e957cade29d39818d826 251 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 193 4.0E-4 T 15-10-2018 Trad_2270 6f2c9be86115e957cade29d39818d826 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 7.2E-10 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2270 6f2c9be86115e957cade29d39818d826 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 7.2E-10 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2270 6f2c9be86115e957cade29d39818d826 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 7.2E-10 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2270 6f2c9be86115e957cade29d39818d826 251 Gene3D G3DSA:3.40.50.720 1 251 1.8E-87 T 15-10-2018 Trad_2407 3893933d1513eacc4979da16cfe6f3b0 444 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 1 432 61.646 T 15-10-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 Trad_2407 3893933d1513eacc4979da16cfe6f3b0 444 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 4 430 2.2E-128 T 15-10-2018 Trad_2407 3893933d1513eacc4979da16cfe6f3b0 444 SUPERFAMILY SSF102114 129 367 5.62E-61 T 15-10-2018 Trad_2407 3893933d1513eacc4979da16cfe6f3b0 444 Gene3D G3DSA:3.80.30.20 141 373 2.0E-86 T 15-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Trad_2407 3893933d1513eacc4979da16cfe6f3b0 444 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 146 166 - T 15-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 Trad_2407 3893933d1513eacc4979da16cfe6f3b0 444 Gene3D G3DSA:3.40.50.12160 1 130 1.3E-26 T 15-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily Trad_2407 3893933d1513eacc4979da16cfe6f3b0 444 Pfam PF00919 Uncharacterized protein family UPF0004 3 101 2.7E-23 T 15-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 Trad_2407 3893933d1513eacc4979da16cfe6f3b0 444 SMART SM00729 142 359 3.1E-58 T 15-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Trad_2407 3893933d1513eacc4979da16cfe6f3b0 444 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 3 428 6.2E-140 T 15-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 Trad_2407 3893933d1513eacc4979da16cfe6f3b0 444 Pfam PF04055 Radical SAM superfamily 147 315 5.5E-33 T 15-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Trad_1451 41981c12398372576114aa092e07cbd6 128 Pfam PF09701 CRISPR-associated protein (Cas_Cmr5) 6 120 3.3E-34 T 15-10-2018 IPR010160 CRISPR-associated protein, Cmr5 Trad_1451 41981c12398372576114aa092e07cbd6 128 SUPERFAMILY SSF158568 1 122 6.02E-31 T 15-10-2018 IPR023101 AF1862-like domain superfamily Trad_1451 41981c12398372576114aa092e07cbd6 128 TIGRFAM TIGR01881 cas_Cmr5: CRISPR type III-B/RAMP module-associated protein Cmr5 3 122 6.8E-11 T 15-10-2018 IPR010160 CRISPR-associated protein, Cmr5 Trad_1451 41981c12398372576114aa092e07cbd6 128 Gene3D G3DSA:1.10.520.30 1 58 1.2E-12 T 15-10-2018 IPR023101 AF1862-like domain superfamily Trad_1451 41981c12398372576114aa092e07cbd6 128 Gene3D G3DSA:1.10.520.30 59 128 2.6E-13 T 15-10-2018 IPR023101 AF1862-like domain superfamily Trad_1889 131b31e5f2ffff6cc917de6e2750732c 171 SUPERFAMILY SSF55729 7 161 5.66E-23 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase Trad_1889 131b31e5f2ffff6cc917de6e2750732c 171 Gene3D G3DSA:3.40.630.30 8 169 1.3E-19 T 15-10-2018 Trad_1889 131b31e5f2ffff6cc917de6e2750732c 171 Pfam PF13673 Acetyltransferase (GNAT) domain 58 160 3.0E-13 T 15-10-2018 IPR000182 GNAT domain Trad_1945 26b807f86f88e451d73d8c81fd486ea0 769 Pfam PF00270 DEAD/DEAH box helicase 62 228 3.8E-21 T 15-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Trad_1945 26b807f86f88e451d73d8c81fd486ea0 769 SMART SM00490 311 393 5.9E-19 T 15-10-2018 IPR001650 Helicase, C-terminal Trad_1945 26b807f86f88e451d73d8c81fd486ea0 769 Gene3D G3DSA:3.40.50.300 50 246 9.5E-40 T 15-10-2018 Trad_1945 26b807f86f88e451d73d8c81fd486ea0 769 Pfam PF09369 Domain of unknown function (DUF1998) 653 732 3.2E-20 T 15-10-2018 IPR018973 DEAD/DEAH-box helicase, putative Trad_1945 26b807f86f88e451d73d8c81fd486ea0 769 Pfam PF00271 Helicase conserved C-terminal domain 290 393 8.9E-17 T 15-10-2018 IPR001650 Helicase, C-terminal Trad_1945 26b807f86f88e451d73d8c81fd486ea0 769 SUPERFAMILY SSF52540 100 411 4.33E-43 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_1945 26b807f86f88e451d73d8c81fd486ea0 769 SMART SM00487 55 260 2.4E-27 T 15-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Trad_1945 26b807f86f88e451d73d8c81fd486ea0 769 Gene3D G3DSA:3.40.50.300 274 454 6.7E-25 T 15-10-2018 Trad_1439 62f333706dd4217092512a1379e7a9e6 647 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 41 146 3.7E-17 T 15-10-2018 IPR007831 General secretory system II, protein E, N-terminal Trad_1439 62f333706dd4217092512a1379e7a9e6 647 SUPERFAMILY SSF53448 240 519 1.31E-43 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Trad_1439 62f333706dd4217092512a1379e7a9e6 647 Pfam PF13632 Glycosyl transferase family group 2 329 539 7.9E-26 T 15-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Trad_1439 62f333706dd4217092512a1379e7a9e6 647 SUPERFAMILY SSF160246 4 144 7.85E-29 T 15-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily Trad_1439 62f333706dd4217092512a1379e7a9e6 647 Gene3D G3DSA:3.90.550.10 234 451 9.0E-40 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Trad_1981 73be4ad991de62988a14e294d3833969 685 Gene3D G3DSA:1.10.1370.40 12 664 7.1E-247 T 15-10-2018 Trad_1981 73be4ad991de62988a14e294d3833969 685 Pfam PF01432 Peptidase family M3 220 664 1.1E-132 T 15-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 Trad_1981 73be4ad991de62988a14e294d3833969 685 SUPERFAMILY SSF55486 2 663 2.28E-171 T 15-10-2018 Trad_1981 73be4ad991de62988a14e294d3833969 685 Gene3D G3DSA:1.10.1370.10 138 599 7.1E-247 T 15-10-2018 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 Trad_1393 76fbfce57eb99ef06658b637a9096246 144 Gene3D G3DSA:3.40.50.1010 1 139 2.3E-8 T 15-10-2018 Trad_1393 76fbfce57eb99ef06658b637a9096246 144 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 2 139 13.921 T 15-10-2018 IPR022907 VapC family GO:0004540 Trad_1393 76fbfce57eb99ef06658b637a9096246 144 TIGRFAM TIGR00028 Mtu_PIN_fam: toxin-antitoxin system PIN domain toxin 2 142 3.1E-39 T 15-10-2018 IPR006226 PIN domain toxin GO:0016788 Trad_1393 76fbfce57eb99ef06658b637a9096246 144 Pfam PF01850 PIN domain 2 132 5.2E-9 T 15-10-2018 IPR002716 PIN domain Trad_1393 76fbfce57eb99ef06658b637a9096246 144 SUPERFAMILY SSF88723 2 140 1.18E-18 T 15-10-2018 IPR029060 PIN-like domain superfamily Trad_2846 06df80ca8b4a3f5c29ba45c79100c2fd 543 SUPERFAMILY SSF55073 33 211 7.69E-46 T 15-10-2018 IPR029787 Nucleotide cyclase Trad_2846 06df80ca8b4a3f5c29ba45c79100c2fd 543 Pfam PF13191 AAA ATPase domain 224 283 2.6E-9 T 15-10-2018 Trad_2846 06df80ca8b4a3f5c29ba45c79100c2fd 543 SMART SM00044 10 194 5.9E-8 T 15-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 Trad_2846 06df80ca8b4a3f5c29ba45c79100c2fd 543 Gene3D G3DSA:3.40.50.300 216 328 5.1E-9 T 15-10-2018 Trad_2846 06df80ca8b4a3f5c29ba45c79100c2fd 543 SUPERFAMILY SSF52540 224 373 3.29E-11 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_2846 06df80ca8b4a3f5c29ba45c79100c2fd 543 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 34 191 7.9E-23 T 15-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 Trad_2846 06df80ca8b4a3f5c29ba45c79100c2fd 543 Gene3D G3DSA:3.30.70.1230 28 215 7.5E-46 T 15-10-2018 IPR029787 Nucleotide cyclase Trad_2395 68ece130be39dbda13ba220f782b569d 206 Gene3D G3DSA:3.40.50.360 1 202 1.2E-71 T 15-10-2018 IPR029039 Flavoprotein-like superfamily Trad_2395 68ece130be39dbda13ba220f782b569d 206 SUPERFAMILY SSF52218 4 197 2.36E-50 T 15-10-2018 IPR029039 Flavoprotein-like superfamily Trad_2395 68ece130be39dbda13ba220f782b569d 206 TIGRFAM TIGR01755 flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 5 196 3.6E-46 T 15-10-2018 IPR010089 Flavoprotein WrbA-like GO:0003955|GO:0010181 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 Trad_2395 68ece130be39dbda13ba220f782b569d 206 Pfam PF03358 NADPH-dependent FMN reductase 5 149 1.3E-17 T 15-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 Trad_2504 2b14827219c45f8e2b0778330e82eb67 142 SUPERFAMILY SSF54637 8 137 6.85E-35 T 15-10-2018 IPR029069 HotDog domain superfamily Trad_2504 2b14827219c45f8e2b0778330e82eb67 142 Pfam PF13279 Thioesterase-like superfamily 15 136 6.2E-15 T 15-10-2018 Trad_2504 2b14827219c45f8e2b0778330e82eb67 142 PIRSF PIRSF003230 2 141 5.0E-20 T 15-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 Trad_2504 2b14827219c45f8e2b0778330e82eb67 142 Gene3D G3DSA:3.10.129.10 3 138 1.2E-34 T 15-10-2018 Trad_2276 364544cb9d742a0387addcc2774417d2 164 Gene3D G3DSA:3.40.630.30 2 155 5.5E-27 T 15-10-2018 Trad_2276 364544cb9d742a0387addcc2774417d2 164 SUPERFAMILY SSF55729 18 134 1.63E-19 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase Trad_2276 364544cb9d742a0387addcc2774417d2 164 Pfam PF13527 Acetyltransferase (GNAT) domain 21 124 1.1E-13 T 15-10-2018 Trad_0628 df53418f1f5125353edcdd9a631848c1 377 SUPERFAMILY SSF53850 69 312 3.47E-32 T 15-10-2018 Trad_0628 df53418f1f5125353edcdd9a631848c1 377 Gene3D G3DSA:3.40.190.10 151 256 1.8E-51 T 15-10-2018 Trad_0628 df53418f1f5125353edcdd9a631848c1 377 Gene3D G3DSA:3.40.190.10 78 339 1.8E-51 T 15-10-2018 Trad_0628 df53418f1f5125353edcdd9a631848c1 377 Pfam PF09084 NMT1/THI5 like 89 289 2.7E-22 T 15-10-2018 IPR015168 SsuA/THI5-like Trad_0571 73bb9fa5b1ef941085c884bdc1e12128 390 Gene3D G3DSA:3.40.50.2300 34 364 8.8E-77 T 15-10-2018 Trad_0571 73bb9fa5b1ef941085c884bdc1e12128 390 Pfam PF13458 Periplasmic binding protein 26 377 9.7E-58 T 15-10-2018 IPR028081 Leucine-binding protein domain Trad_0571 73bb9fa5b1ef941085c884bdc1e12128 390 SUPERFAMILY SSF53822 26 383 8.35E-62 T 15-10-2018 IPR028082 Periplasmic binding protein-like I Trad_0571 73bb9fa5b1ef941085c884bdc1e12128 390 Gene3D G3DSA:3.40.50.2300 145 279 8.8E-77 T 15-10-2018 Trad_1831 1963d31002158c28b61a85ed21c190b5 449 SUPERFAMILY SSF51905 26 428 3.43E-47 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Trad_1831 1963d31002158c28b61a85ed21c190b5 449 Pfam PF03486 HI0933-like protein 28 423 8.1E-120 T 15-10-2018 Trad_1831 1963d31002158c28b61a85ed21c190b5 449 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 30 423 1.1E-120 T 15-10-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like Trad_1831 1963d31002158c28b61a85ed21c190b5 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 185 194 3.2E-7 T 15-10-2018 Trad_1831 1963d31002158c28b61a85ed21c190b5 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 393 400 3.2E-7 T 15-10-2018 Trad_1831 1963d31002158c28b61a85ed21c190b5 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 28 50 3.2E-7 T 15-10-2018 Trad_1831 1963d31002158c28b61a85ed21c190b5 449 Gene3D G3DSA:1.10.8.260 292 353 1.8E-108 T 15-10-2018 IPR023166 HI0933-like insert domain superfamily Trad_1831 1963d31002158c28b61a85ed21c190b5 449 SUPERFAMILY SSF160996 209 371 4.05E-38 T 15-10-2018 Trad_1831 1963d31002158c28b61a85ed21c190b5 449 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 182 200 2.5E-7 T 15-10-2018 Trad_1831 1963d31002158c28b61a85ed21c190b5 449 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 29 48 2.5E-7 T 15-10-2018 Trad_1831 1963d31002158c28b61a85ed21c190b5 449 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 378 400 2.5E-7 T 15-10-2018 Trad_1831 1963d31002158c28b61a85ed21c190b5 449 Gene3D G3DSA:2.40.30.10 210 370 1.8E-108 T 15-10-2018 Trad_1831 1963d31002158c28b61a85ed21c190b5 449 Gene3D G3DSA:3.50.50.60 30 422 1.8E-108 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Trad_1184 16c8b8c4bd7b24099dede6b7ad951b8f 448 Gene3D G3DSA:2.40.10.120 56 310 2.9E-62 T 15-10-2018 Trad_1184 16c8b8c4bd7b24099dede6b7ad951b8f 448 PRINTS PR00834 HtrA/DegQ protease family signature 249 266 1.0E-32 T 15-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Trad_1184 16c8b8c4bd7b24099dede6b7ad951b8f 448 PRINTS PR00834 HtrA/DegQ protease family signature 271 288 1.0E-32 T 15-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Trad_1184 16c8b8c4bd7b24099dede6b7ad951b8f 448 PRINTS PR00834 HtrA/DegQ protease family signature 213 237 1.0E-32 T 15-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Trad_1184 16c8b8c4bd7b24099dede6b7ad951b8f 448 PRINTS PR00834 HtrA/DegQ protease family signature 128 140 1.0E-32 T 15-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Trad_1184 16c8b8c4bd7b24099dede6b7ad951b8f 448 SUPERFAMILY SSF50494 59 312 2.52E-52 T 15-10-2018 IPR009003 Peptidase S1, PA clan Trad_1184 16c8b8c4bd7b24099dede6b7ad951b8f 448 Pfam PF13365 Trypsin-like peptidase domain 119 278 2.4E-31 T 15-10-2018 Trad_1184 16c8b8c4bd7b24099dede6b7ad951b8f 448 SUPERFAMILY SSF50156 351 438 8.28E-19 T 15-10-2018 IPR036034 PDZ superfamily GO:0005515 Trad_1184 16c8b8c4bd7b24099dede6b7ad951b8f 448 Pfam PF13180 PDZ domain 328 435 4.1E-19 T 15-10-2018 IPR001478 PDZ domain GO:0005515 Trad_1184 16c8b8c4bd7b24099dede6b7ad951b8f 448 Gene3D G3DSA:2.30.42.10 324 441 1.4E-25 T 15-10-2018 Trad_1184 16c8b8c4bd7b24099dede6b7ad951b8f 448 SMART SM00228 311 426 5.0E-9 T 15-10-2018 IPR001478 PDZ domain GO:0005515 Trad_0976 b39adb1d1b09f59849eee80896175078 290 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 144 163 6.1E-11 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_0976 b39adb1d1b09f59849eee80896175078 290 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 71 82 6.1E-11 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_0976 b39adb1d1b09f59849eee80896175078 290 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 124 132 6.1E-11 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_0976 b39adb1d1b09f59849eee80896175078 290 Pfam PF00106 short chain dehydrogenase 5 186 1.2E-38 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_0976 b39adb1d1b09f59849eee80896175078 290 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 71 82 2.3E-22 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_0976 b39adb1d1b09f59849eee80896175078 290 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 2.3E-22 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_0976 b39adb1d1b09f59849eee80896175078 290 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 118 134 2.3E-22 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_0976 b39adb1d1b09f59849eee80896175078 290 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 144 163 2.3E-22 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_0976 b39adb1d1b09f59849eee80896175078 290 Gene3D G3DSA:3.40.50.720 4 255 4.2E-59 T 15-10-2018 Trad_0976 b39adb1d1b09f59849eee80896175078 290 SUPERFAMILY SSF51735 4 262 7.39E-55 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_0976 b39adb1d1b09f59849eee80896175078 290 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 131 159 - T 15-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Trad_2841 1d4d64d9da8947b42386862bdcc79514 344 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 7 331 1.2E-96 T 15-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 Trad_2841 1d4d64d9da8947b42386862bdcc79514 344 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 228 247 - T 15-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 Trad_2841 1d4d64d9da8947b42386862bdcc79514 344 SMART SM01329 7 331 9.8E-155 T 15-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 Trad_2841 1d4d64d9da8947b42386862bdcc79514 344 Gene3D G3DSA:3.40.718.10 5 338 3.6E-139 T 15-10-2018 Trad_2841 1d4d64d9da8947b42386862bdcc79514 344 SUPERFAMILY SSF53659 5 334 5.18E-112 T 15-10-2018 Trad_0786 c20e7827cca9b37e923e7583a46a972f 192 SUPERFAMILY SSF55073 37 187 2.43E-42 T 15-10-2018 IPR029787 Nucleotide cyclase Trad_0786 c20e7827cca9b37e923e7583a46a972f 192 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 28 188 3.9E-45 T 15-10-2018 IPR000160 GGDEF domain Trad_0786 c20e7827cca9b37e923e7583a46a972f 192 SMART SM00267 21 188 6.0E-57 T 15-10-2018 IPR000160 GGDEF domain Trad_0786 c20e7827cca9b37e923e7583a46a972f 192 Gene3D G3DSA:3.30.70.270 18 189 1.1E-52 T 15-10-2018 Trad_0786 c20e7827cca9b37e923e7583a46a972f 192 Pfam PF00990 Diguanylate cyclase, GGDEF domain 32 184 1.3E-41 T 15-10-2018 IPR000160 GGDEF domain Trad_0205 bd8b8ca4a206a6cb72880d6cb124e47f 176 Pfam PF13710 ACT domain 14 76 1.8E-17 T 15-10-2018 Trad_0205 bd8b8ca4a206a6cb72880d6cb124e47f 176 SUPERFAMILY SSF55021 82 162 1.01E-25 T 15-10-2018 Trad_0205 bd8b8ca4a206a6cb72880d6cb124e47f 176 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 4 161 1.8E-60 T 15-10-2018 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 Trad_0205 bd8b8ca4a206a6cb72880d6cb124e47f 176 Gene3D G3DSA:3.30.70.1150 86 167 4.3E-28 T 15-10-2018 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal Trad_0205 bd8b8ca4a206a6cb72880d6cb124e47f 176 SUPERFAMILY SSF55021 5 79 1.88E-22 T 15-10-2018 Trad_0205 bd8b8ca4a206a6cb72880d6cb124e47f 176 Pfam PF10369 Small subunit of acetolactate synthase 87 160 1.3E-28 T 15-10-2018 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 Trad_0205 bd8b8ca4a206a6cb72880d6cb124e47f 176 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 5 78 9.0E-22 T 15-10-2018 Trad_0205 bd8b8ca4a206a6cb72880d6cb124e47f 176 Gene3D G3DSA:3.30.70.260 2 81 2.6E-33 T 15-10-2018 Trad_0356 af1cea680df86a13806e7ad9603af426 152 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 6 116 7.7E-12 T 15-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Trad_0356 af1cea680df86a13806e7ad9603af426 152 Gene3D G3DSA:1.20.1300.10 12 127 4.7E-20 T 15-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Trad_0356 af1cea680df86a13806e7ad9603af426 152 SUPERFAMILY SSF81343 10 129 4.14E-22 T 15-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Trad_0250 1ce1aca7f508e9e202ca3e140b8a7a6b 218 Pfam PF03473 MOSC domain 46 158 2.1E-21 T 15-10-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 Trad_0250 1ce1aca7f508e9e202ca3e140b8a7a6b 218 Gene3D G3DSA:2.40.33.20 1 214 1.6E-65 T 15-10-2018 Trad_0250 1ce1aca7f508e9e202ca3e140b8a7a6b 218 SUPERFAMILY SSF50800 1 197 3.77E-58 T 15-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily Trad_0089 4875a7ec3aa238307e8420b0f51172f2 90 TIGRFAM TIGR04354 amphi-Trp: amphi-Trp domain 8 78 9.7E-22 T 15-10-2018 IPR027598 Amphi-Trp domain Trad_2660 55e495d89a1d1409d08d43a107eea99d 282 Gene3D G3DSA:3.40.50.1580 9 280 5.0E-95 T 15-10-2018 Trad_2660 55e495d89a1d1409d08d43a107eea99d 282 SUPERFAMILY SSF53167 16 282 5.24E-83 T 15-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 Trad_2660 55e495d89a1d1409d08d43a107eea99d 282 TIGRFAM TIGR01697 PNPH-PUNA-XAPA: inosine/guanosine/xanthosine phosphorylase family 33 278 8.2E-90 T 15-10-2018 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-6798695|Reactome: R-HSA-74217|Reactome: R-HSA-74259 Trad_2660 55e495d89a1d1409d08d43a107eea99d 282 Pfam PF01048 Phosphorylase superfamily 34 279 1.3E-49 T 15-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 Trad_2660 55e495d89a1d1409d08d43a107eea99d 282 TIGRFAM TIGR01700 PNPH: purine nucleoside phosphorylase I, inosine and guanosine-specific 33 278 8.8E-92 T 15-10-2018 IPR011270 Purine nucleoside phosphorylase I, inosine/guanosine-specific GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-6798695|Reactome: R-HSA-74217|Reactome: R-HSA-74259 Trad_2660 55e495d89a1d1409d08d43a107eea99d 282 PIRSF PIRSF000477 8 282 8.5E-91 T 15-10-2018 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-6798695|Reactome: R-HSA-74217|Reactome: R-HSA-74259 Trad_0841 e1d7334abc543ef804ebb8e7f6a170b3 335 Gene3D G3DSA:3.10.310.10 146 311 4.2E-134 T 15-10-2018 Trad_0841 e1d7334abc543ef804ebb8e7f6a170b3 335 PIRSF PIRSF029792 1 335 5.3E-127 T 15-10-2018 IPR008794 Proline racemase family Trad_0841 e1d7334abc543ef804ebb8e7f6a170b3 335 Pfam PF05544 Proline racemase 10 332 1.4E-117 T 15-10-2018 IPR008794 Proline racemase family Trad_0841 e1d7334abc543ef804ebb8e7f6a170b3 335 Gene3D G3DSA:3.10.310.10 8 334 4.2E-134 T 15-10-2018 Trad_0841 e1d7334abc543ef804ebb8e7f6a170b3 335 SUPERFAMILY SSF54506 1 332 4.08E-114 T 15-10-2018 Trad_1377 7c3495112f6910bed347b7b13c420d6b 241 Gene3D G3DSA:3.30.70.980 86 230 1.1E-47 T 15-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Trad_1377 7c3495112f6910bed347b7b13c420d6b 241 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 234 30.601 T 15-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Trad_1377 7c3495112f6910bed347b7b13c420d6b 241 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 232 2.9E-78 T 15-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Trad_1377 7c3495112f6910bed347b7b13c420d6b 241 SUPERFAMILY SSF75625 3 236 1.57E-76 T 15-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Trad_1377 7c3495112f6910bed347b7b13c420d6b 241 Gene3D G3DSA:3.30.70.980 129 200 1.1E-47 T 15-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Trad_1377 7c3495112f6910bed347b7b13c420d6b 241 Gene3D G3DSA:1.10.10.200 1 82 2.3E-28 T 15-10-2018 IPR017856 Integrase-like, N-terminal Trad_1377 7c3495112f6910bed347b7b13c420d6b 241 Pfam PF01709 Transcriptional regulator 5 231 1.0E-80 T 15-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Trad_2107 f82535b53533365f7531c73e0007e59c 313 Pfam PF03576 Peptidase family S58 11 311 7.7E-57 T 15-10-2018 IPR005321 Peptidase S58, DmpA Trad_2107 f82535b53533365f7531c73e0007e59c 313 SUPERFAMILY SSF56266 6 310 1.1E-62 T 15-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 Trad_2107 f82535b53533365f7531c73e0007e59c 313 Gene3D G3DSA:3.60.70.12 4 313 7.8E-102 T 15-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 Trad_1002 98a616dd3904f906b321b8b29286ba74 291 Pfam PF00218 Indole-3-glycerol phosphate synthase 61 282 5.8E-62 T 15-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 Trad_1002 98a616dd3904f906b321b8b29286ba74 291 SUPERFAMILY SSF51366 36 284 1.96E-63 T 15-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Trad_1002 98a616dd3904f906b321b8b29286ba74 291 Gene3D G3DSA:3.20.20.70 29 285 6.3E-80 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Trad_1002 98a616dd3904f906b321b8b29286ba74 291 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 79 96 - T 15-10-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 Trad_2704 3df62f95f189bf9d12b785e0e400e059 225 Pfam PF02742 Iron dependent repressor, metal binding and dimerisation domain 65 133 3.2E-29 T 15-10-2018 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 Trad_2704 3df62f95f189bf9d12b785e0e400e059 225 Gene3D G3DSA:1.10.10.10 4 137 4.5E-52 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Trad_2704 3df62f95f189bf9d12b785e0e400e059 225 SUPERFAMILY SSF46785 7 92 9.75E-12 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Trad_2704 3df62f95f189bf9d12b785e0e400e059 225 Gene3D G3DSA:2.30.30.90 146 221 2.5E-12 T 15-10-2018 IPR038157 Ferrous iron transporter, core domain Trad_2704 3df62f95f189bf9d12b785e0e400e059 225 Pfam PF04023 FeoA domain 145 214 6.2E-16 T 15-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 Trad_2704 3df62f95f189bf9d12b785e0e400e059 225 SMART SM00529 26 125 8.3E-42 T 15-10-2018 IPR022689 Iron dependent repressor GO:0003700|GO:0006355|GO:0046914 Trad_2704 3df62f95f189bf9d12b785e0e400e059 225 SUPERFAMILY SSF50037 149 218 1.97E-10 T 15-10-2018 IPR008988 Transcriptional repressor, C-terminal Trad_2704 3df62f95f189bf9d12b785e0e400e059 225 SMART SM00899 145 218 4.8E-16 T 15-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 Trad_2704 3df62f95f189bf9d12b785e0e400e059 225 SUPERFAMILY SSF47979 65 138 1.44E-25 T 15-10-2018 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily GO:0046914|GO:0046983 Trad_2704 3df62f95f189bf9d12b785e0e400e059 225 Pfam PF01325 Iron dependent repressor, N-terminal DNA binding domain 7 62 1.9E-15 T 15-10-2018 IPR022687 DTXR-type HTH domain GO:0003677 Trad_2919 277072dd0c179bafe259a14c67806b2d 436 PRINTS PR00463 E-class P450 group I signature 52 73 1.4E-28 T 15-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 Trad_2919 277072dd0c179bafe259a14c67806b2d 436 PRINTS PR00463 E-class P450 group I signature 374 384 1.4E-28 T 15-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 Trad_2919 277072dd0c179bafe259a14c67806b2d 436 PRINTS PR00463 E-class P450 group I signature 259 285 1.4E-28 T 15-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 Trad_2919 277072dd0c179bafe259a14c67806b2d 436 PRINTS PR00463 E-class P450 group I signature 301 319 1.4E-28 T 15-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 Trad_2919 277072dd0c179bafe259a14c67806b2d 436 PRINTS PR00463 E-class P450 group I signature 384 407 1.4E-28 T 15-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 Trad_2919 277072dd0c179bafe259a14c67806b2d 436 PRINTS PR00463 E-class P450 group I signature 341 365 1.4E-28 T 15-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 Trad_2919 277072dd0c179bafe259a14c67806b2d 436 PRINTS PR00463 E-class P450 group I signature 239 256 1.4E-28 T 15-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 Trad_2919 277072dd0c179bafe259a14c67806b2d 436 SUPERFAMILY SSF48264 6 433 2.23E-114 T 15-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 Trad_2919 277072dd0c179bafe259a14c67806b2d 436 Pfam PF00067 Cytochrome P450 6 426 1.6E-88 T 15-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Trad_2919 277072dd0c179bafe259a14c67806b2d 436 Gene3D G3DSA:1.10.630.10 3 436 4.1E-135 T 15-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 Trad_2919 277072dd0c179bafe259a14c67806b2d 436 PRINTS PR00385 P450 superfamily signature 375 384 2.2E-15 T 15-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Trad_2919 277072dd0c179bafe259a14c67806b2d 436 PRINTS PR00385 P450 superfamily signature 302 313 2.2E-15 T 15-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Trad_2919 277072dd0c179bafe259a14c67806b2d 436 PRINTS PR00385 P450 superfamily signature 384 395 2.2E-15 T 15-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Trad_2919 277072dd0c179bafe259a14c67806b2d 436 PRINTS PR00385 P450 superfamily signature 250 267 2.2E-15 T 15-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Trad_2919 277072dd0c179bafe259a14c67806b2d 436 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 377 386 - T 15-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 Trad_2161 7e858d24e2ee6cc93cfba691eb32b6c7 292 PRINTS PR00412 Epoxide hydrolase signature 63 78 2.3E-25 T 15-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Trad_2161 7e858d24e2ee6cc93cfba691eb32b6c7 292 PRINTS PR00412 Epoxide hydrolase signature 269 291 2.3E-25 T 15-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Trad_2161 7e858d24e2ee6cc93cfba691eb32b6c7 292 PRINTS PR00412 Epoxide hydrolase signature 237 253 2.3E-25 T 15-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Trad_2161 7e858d24e2ee6cc93cfba691eb32b6c7 292 PRINTS PR00412 Epoxide hydrolase signature 43 61 2.3E-25 T 15-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Trad_2161 7e858d24e2ee6cc93cfba691eb32b6c7 292 PRINTS PR00412 Epoxide hydrolase signature 109 122 2.3E-25 T 15-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Trad_2161 7e858d24e2ee6cc93cfba691eb32b6c7 292 PRINTS PR00412 Epoxide hydrolase signature 123 136 2.3E-25 T 15-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Trad_2161 7e858d24e2ee6cc93cfba691eb32b6c7 292 Pfam PF00561 alpha/beta hydrolase fold 37 280 7.5E-24 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Trad_2161 7e858d24e2ee6cc93cfba691eb32b6c7 292 PRINTS PR00111 Alpha/beta hydrolase fold signature 123 136 8.3E-11 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Trad_2161 7e858d24e2ee6cc93cfba691eb32b6c7 292 PRINTS PR00111 Alpha/beta hydrolase fold signature 63 78 8.3E-11 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Trad_2161 7e858d24e2ee6cc93cfba691eb32b6c7 292 PRINTS PR00111 Alpha/beta hydrolase fold signature 109 122 8.3E-11 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Trad_2161 7e858d24e2ee6cc93cfba691eb32b6c7 292 Gene3D G3DSA:3.40.50.1820 14 292 2.2E-84 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold Trad_2161 7e858d24e2ee6cc93cfba691eb32b6c7 292 SUPERFAMILY SSF53474 16 292 8.59E-74 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold Trad_1978 8c7f7fd08ff9024c7aa29f8ee9f6e7bb 437 Pfam PF01547 Bacterial extracellular solute-binding protein 38 345 2.4E-30 T 15-10-2018 IPR006059 Bacterial extracellular solute-binding protein Trad_1978 8c7f7fd08ff9024c7aa29f8ee9f6e7bb 437 Gene3D G3DSA:3.40.190.10 22 437 2.0E-98 T 15-10-2018 Trad_1978 8c7f7fd08ff9024c7aa29f8ee9f6e7bb 437 SUPERFAMILY SSF53850 25 433 4.81E-64 T 15-10-2018 Trad_0958 47498c19c4561176a3a6ec7f10932458 134 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 2 134 11.832 T 15-10-2018 IPR022907 VapC family GO:0004540 Trad_0958 47498c19c4561176a3a6ec7f10932458 134 SUPERFAMILY SSF88723 1 131 5.61E-27 T 15-10-2018 IPR029060 PIN-like domain superfamily Trad_0958 47498c19c4561176a3a6ec7f10932458 134 Pfam PF01850 PIN domain 2 129 2.2E-16 T 15-10-2018 IPR002716 PIN domain Trad_0958 47498c19c4561176a3a6ec7f10932458 134 Gene3D G3DSA:3.40.50.1010 1 134 4.8E-36 T 15-10-2018 Trad_1082 ca443d693ef3c593ee6dbf8df312a6d9 196 Pfam PF00025 ADP-ribosylation factor family 11 187 6.3E-6 T 15-10-2018 IPR006689 Small GTPase superfamily, ARF/SAR type GO:0005525 Trad_1082 ca443d693ef3c593ee6dbf8df312a6d9 196 SUPERFAMILY SSF52540 10 191 5.03E-23 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_1082 ca443d693ef3c593ee6dbf8df312a6d9 196 Gene3D G3DSA:3.40.50.300 1 196 2.6E-81 T 15-10-2018 Trad_2018 142757c32a2af61898fdfbe8dcfee3f7 579 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 209 429 8.6E-91 T 15-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Trad_2018 142757c32a2af61898fdfbe8dcfee3f7 579 Gene3D G3DSA:2.40.30.20 2 72 1.1E-29 T 15-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Trad_2018 142757c32a2af61898fdfbe8dcfee3f7 579 Hamap MF_00309 V-type ATP synthase alpha chain [atpA]. 2 578 50.535 T 15-10-2018 IPR022878 V-type ATP synthase catalytic alpha chain GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 Trad_2018 142757c32a2af61898fdfbe8dcfee3f7 579 Pfam PF16886 ATPsynthase alpha/beta subunit N-term extension 85 200 5.3E-43 T 15-10-2018 IPR031686 ATPsynthase alpha/beta subunit, N-terminal extension KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 Trad_2018 142757c32a2af61898fdfbe8dcfee3f7 579 Gene3D G3DSA:3.40.50.300 74 430 1.8E-177 T 15-10-2018 Trad_2018 142757c32a2af61898fdfbe8dcfee3f7 579 Gene3D G3DSA:2.40.50.100 116 182 1.8E-177 T 15-10-2018 Trad_2018 142757c32a2af61898fdfbe8dcfee3f7 579 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 7 69 1.3E-11 T 15-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Trad_2018 142757c32a2af61898fdfbe8dcfee3f7 579 SUPERFAMILY SSF52540 146 434 9.04E-79 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_2018 142757c32a2af61898fdfbe8dcfee3f7 579 SUPERFAMILY SSF50615 4 71 1.18E-11 T 15-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Trad_2018 142757c32a2af61898fdfbe8dcfee3f7 579 SUPERFAMILY SSF47917 442 532 3.66E-23 T 15-10-2018 Trad_2018 142757c32a2af61898fdfbe8dcfee3f7 579 Gene3D G3DSA:1.10.1140.10 431 578 3.2E-45 T 15-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Trad_2982 3532982fa3ea0490667c7c5ed367d558 447 Gene3D G3DSA:3.10.20.600 247 340 1.6E-33 T 15-10-2018 Trad_2982 3532982fa3ea0490667c7c5ed367d558 447 ProSitePatterns PS00644 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. 182 197 - T 15-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Trad_2982 3532982fa3ea0490667c7c5ed367d558 447 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 63 234 4.6E-51 T 15-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Trad_2982 3532982fa3ea0490667c7c5ed367d558 447 SUPERFAMILY SSF140490 341 439 4.32E-33 T 15-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Trad_2982 3532982fa3ea0490667c7c5ed367d558 447 SUPERFAMILY SSF142019 23 255 2.22E-91 T 15-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Trad_2982 3532982fa3ea0490667c7c5ed367d558 447 TIGRFAM TIGR01959 nuoF_fam: NADH oxidoreductase (quinone), F subunit 23 430 1.1E-171 T 15-10-2018 IPR011537 NADH ubiquinone oxidoreductase, F subunit GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Trad_2982 3532982fa3ea0490667c7c5ed367d558 447 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 357 368 - T 15-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Trad_2982 3532982fa3ea0490667c7c5ed367d558 447 Pfam PF10531 SLBB domain 259 305 1.4E-8 T 15-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Trad_2982 3532982fa3ea0490667c7c5ed367d558 447 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 346 428 5.5E-26 T 15-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Trad_2982 3532982fa3ea0490667c7c5ed367d558 447 Gene3D G3DSA:3.40.50.11540 68 246 2.4E-82 T 15-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Trad_2982 3532982fa3ea0490667c7c5ed367d558 447 SMART SM00928 344 390 3.4E-21 T 15-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Trad_2982 3532982fa3ea0490667c7c5ed367d558 447 Gene3D G3DSA:1.20.1440.230 342 445 5.2E-32 T 15-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Trad_2982 3532982fa3ea0490667c7c5ed367d558 447 SUPERFAMILY SSF142984 256 338 3.79E-23 T 15-10-2018 Trad_2389 ebc6a39790a4b0dd36624268734c70d9 387 Pfam PF13527 Acetyltransferase (GNAT) domain 5 128 1.1E-19 T 15-10-2018 Trad_2389 ebc6a39790a4b0dd36624268734c70d9 387 Gene3D G3DSA:3.40.630.30 134 271 1.8E-14 T 15-10-2018 Trad_2389 ebc6a39790a4b0dd36624268734c70d9 387 SUPERFAMILY SSF55718 283 382 1.06E-16 T 15-10-2018 IPR036527 SCP2 sterol-binding domain superfamily Trad_2389 ebc6a39790a4b0dd36624268734c70d9 387 Pfam PF13530 Sterol carrier protein domain 204 381 1.9E-35 T 15-10-2018 IPR025559 Enhanced intracellular survival protein domain Trad_2389 ebc6a39790a4b0dd36624268734c70d9 387 Gene3D G3DSA:3.30.1050.10 281 375 3.7E-17 T 15-10-2018 IPR036527 SCP2 sterol-binding domain superfamily Trad_2389 ebc6a39790a4b0dd36624268734c70d9 387 Gene3D G3DSA:3.40.630.30 2 132 1.7E-25 T 15-10-2018 Trad_2389 ebc6a39790a4b0dd36624268734c70d9 387 SUPERFAMILY SSF55729 5 266 1.78E-39 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase Trad_1240 eb396a0f1a2789a909b004638158ff99 224 Gene3D G3DSA:3.40.1050.10 2 208 5.7E-64 T 15-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 Trad_1240 eb396a0f1a2789a909b004638158ff99 224 Pfam PF00484 Carbonic anhydrase 51 202 2.3E-40 T 15-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 Trad_1240 eb396a0f1a2789a909b004638158ff99 224 SUPERFAMILY SSF53056 4 206 3.79E-55 T 15-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 Trad_1240 eb396a0f1a2789a909b004638158ff99 224 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 55 62 - T 15-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 Trad_1240 eb396a0f1a2789a909b004638158ff99 224 SMART SM00947 43 207 2.9E-54 T 15-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 Trad_0330 84644afe2d55335c81d3814edd233828 219 SMART SM01118 1 219 4.6E-13 T 15-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 Trad_0330 84644afe2d55335c81d3814edd233828 219 SUPERFAMILY SSF55154 2 207 2.78E-29 T 15-10-2018 IPR033469 CYTH-like domain superfamily Reactome: R-HSA-196819 Trad_0330 84644afe2d55335c81d3814edd233828 219 Gene3D G3DSA:2.40.320.10 1 215 3.3E-18 T 15-10-2018 Trad_0330 84644afe2d55335c81d3814edd233828 219 Pfam PF01928 CYTH domain 31 212 3.2E-18 T 15-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 Trad_0366 abfcfe552f9292d40f6c37b31b10e292 490 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 14 479 87.022 T 15-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Trad_0366 abfcfe552f9292d40f6c37b31b10e292 490 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 25 477 2.8E-158 T 15-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Trad_0366 abfcfe552f9292d40f6c37b31b10e292 490 Gene3D G3DSA:3.90.1300.10 8 483 1.2E-175 T 15-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Trad_0366 abfcfe552f9292d40f6c37b31b10e292 490 ProSitePatterns PS00571 Amidases signature. 155 186 - T 15-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 Trad_0366 abfcfe552f9292d40f6c37b31b10e292 490 Pfam PF01425 Amidase 28 468 1.3E-149 T 15-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Trad_0366 abfcfe552f9292d40f6c37b31b10e292 490 SUPERFAMILY SSF75304 11 480 3.92E-151 T 15-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Trad_0519 fba293f31535059dd5bd00f0ec9c90a6 782 Gene3D G3DSA:3.90.550.10 432 675 3.3E-46 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Trad_0519 fba293f31535059dd5bd00f0ec9c90a6 782 Gene3D G3DSA:3.90.550.10 5 248 1.3E-31 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Trad_0519 fba293f31535059dd5bd00f0ec9c90a6 782 Pfam PF13641 Glycosyltransferase like family 2 442 679 2.6E-25 T 15-10-2018 Trad_0519 fba293f31535059dd5bd00f0ec9c90a6 782 Pfam PF00535 Glycosyl transferase family 2 19 195 1.8E-19 T 15-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Trad_0519 fba293f31535059dd5bd00f0ec9c90a6 782 SUPERFAMILY SSF53448 3 250 6.75E-36 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Trad_0519 fba293f31535059dd5bd00f0ec9c90a6 782 SUPERFAMILY SSF53448 440 694 1.41E-47 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Trad_0773 f7046cdf8e60c7545500f3c70365bdba 657 Gene3D G3DSA:1.20.1560.10 40 391 3.2E-91 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Trad_0773 f7046cdf8e60c7545500f3c70365bdba 657 SMART SM00382 431 618 1.7E-13 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_0773 f7046cdf8e60c7545500f3c70365bdba 657 Gene3D G3DSA:3.40.50.300 402 655 1.9E-87 T 15-10-2018 Trad_0773 f7046cdf8e60c7545500f3c70365bdba 657 SUPERFAMILY SSF52540 400 643 3.38E-88 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_0773 f7046cdf8e60c7545500f3c70365bdba 657 Pfam PF00005 ABC transporter 422 572 4.1E-30 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Trad_0773 f7046cdf8e60c7545500f3c70365bdba 657 SUPERFAMILY SSF90123 56 393 3.01E-82 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Trad_0773 f7046cdf8e60c7545500f3c70365bdba 657 Pfam PF00664 ABC transporter transmembrane region 74 353 1.3E-51 T 15-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Trad_2509 0c95d19e8ad1056de96a42264404cbd8 385 SUPERFAMILY SSF55874 264 381 1.22E-14 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Trad_2509 0c95d19e8ad1056de96a42264404cbd8 385 Gene3D G3DSA:3.30.565.10 262 381 1.9E-25 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Trad_2509 0c95d19e8ad1056de96a42264404cbd8 385 Pfam PF07730 Histidine kinase 192 257 2.5E-15 T 15-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 Trad_0024 ca6c51e17d9007f088dcb0f175cd6bbd 466 SUPERFAMILY SSF82051 4 157 5.75E-47 T 15-10-2018 IPR036726 GTP1/OBG domain superfamily Trad_0024 ca6c51e17d9007f088dcb0f175cd6bbd 466 Pfam PF09269 Domain of unknown function (DUF1967) 347 413 5.0E-16 T 15-10-2018 IPR015349 GTP-binding protein OBG, C-terminal GO:0000166 Trad_0024 ca6c51e17d9007f088dcb0f175cd6bbd 466 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 5 323 4.0E-117 T 15-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 Trad_0024 ca6c51e17d9007f088dcb0f175cd6bbd 466 Pfam PF01926 50S ribosome-binding GTPase 162 279 6.0E-24 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 Trad_0024 ca6c51e17d9007f088dcb0f175cd6bbd 466 Hamap MF_01454 GTPase Obg [obg]. 2 325 43.325 T 15-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 Trad_0024 ca6c51e17d9007f088dcb0f175cd6bbd 466 Pfam PF01018 GTP1/OBG 5 157 5.7E-51 T 15-10-2018 IPR006169 GTP1/OBG domain Trad_0024 ca6c51e17d9007f088dcb0f175cd6bbd 466 Gene3D G3DSA:3.40.50.300 159 332 6.6E-50 T 15-10-2018 Trad_0024 ca6c51e17d9007f088dcb0f175cd6bbd 466 ProSitePatterns PS00905 GTP1/OBG family signature. 212 225 - T 15-10-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 Trad_0024 ca6c51e17d9007f088dcb0f175cd6bbd 466 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 163 318 6.9E-13 T 15-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Trad_0024 ca6c51e17d9007f088dcb0f175cd6bbd 466 SUPERFAMILY SSF102741 344 415 1.09E-14 T 15-10-2018 IPR036346 GTP-binding protein OBG, C-terminal domain superfamily Trad_0024 ca6c51e17d9007f088dcb0f175cd6bbd 466 SUPERFAMILY SSF52540 150 328 1.09E-48 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_0024 ca6c51e17d9007f088dcb0f175cd6bbd 466 Gene3D G3DSA:2.40.240.60 344 416 3.1E-14 T 15-10-2018 IPR036346 GTP-binding protein OBG, C-terminal domain superfamily Trad_0024 ca6c51e17d9007f088dcb0f175cd6bbd 466 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 227 245 2.1E-34 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 Trad_0024 ca6c51e17d9007f088dcb0f175cd6bbd 466 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 210 225 2.1E-34 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 Trad_0024 ca6c51e17d9007f088dcb0f175cd6bbd 466 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 2.1E-34 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 Trad_0024 ca6c51e17d9007f088dcb0f175cd6bbd 466 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 2.1E-34 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 Trad_0024 ca6c51e17d9007f088dcb0f175cd6bbd 466 Gene3D G3DSA:2.70.210.12 3 156 3.8E-51 T 15-10-2018 IPR036726 GTP1/OBG domain superfamily Trad_0024 ca6c51e17d9007f088dcb0f175cd6bbd 466 TIGRFAM TIGR03595 Obg_CgtA_exten: Obg family GTPase CgtA, C-terminal extension 346 413 6.3E-17 T 15-10-2018 IPR015349 GTP-binding protein OBG, C-terminal GO:0000166 Trad_2695 ba7f16af2eb42248c2fa53126336fb03 316 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 257 269 9.7E-11 T 15-10-2018 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related Reactome: R-HSA-1296072 Trad_2695 ba7f16af2eb42248c2fa53126336fb03 316 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 270 283 9.7E-11 T 15-10-2018 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related Reactome: R-HSA-1296072 Trad_2695 ba7f16af2eb42248c2fa53126336fb03 316 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 163 182 9.7E-11 T 15-10-2018 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related Reactome: R-HSA-1296072 Trad_2695 ba7f16af2eb42248c2fa53126336fb03 316 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 112 122 9.7E-11 T 15-10-2018 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related Reactome: R-HSA-1296072 Trad_2695 ba7f16af2eb42248c2fa53126336fb03 316 Gene3D G3DSA:3.20.20.100 1 316 1.4E-121 T 15-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Trad_2695 ba7f16af2eb42248c2fa53126336fb03 316 Pfam PF00248 Aldo/keto reductase family 16 314 1.3E-76 T 15-10-2018 IPR023210 NADP-dependent oxidoreductase domain Trad_2695 ba7f16af2eb42248c2fa53126336fb03 316 SUPERFAMILY SSF51430 1 314 3.14E-103 T 15-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Trad_0869 e04b7314e021a8bb8bd4a58b4e682c5c 229 SUPERFAMILY SSF55166 61 211 8.37E-31 T 15-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 Trad_0869 e04b7314e021a8bb8bd4a58b4e682c5c 229 Pfam PF02557 D-alanyl-D-alanine carboxypeptidase 76 203 8.8E-35 T 15-10-2018 IPR003709 Peptidase M15B GO:0006508|GO:0008233 Trad_0869 e04b7314e021a8bb8bd4a58b4e682c5c 229 Gene3D G3DSA:3.30.1380.10 32 224 7.2E-58 T 15-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 Trad_0259 989572a7969d0b03db84998e870d2670 381 Gene3D G3DSA:1.20.5.340 68 208 8.4E-6 T 15-10-2018 Trad_0259 989572a7969d0b03db84998e870d2670 381 ProSitePatterns PS00801 Transketolase signature 1. 282 302 - T 15-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Trad_0259 989572a7969d0b03db84998e870d2670 381 Pfam PF00395 S-layer homology domain 22 65 2.5E-11 T 15-10-2018 IPR001119 S-layer homology domain Trad_1530 8d4f519c234dcb96751c18e04f566b09 308 SUPERFAMILY SSF160964 24 60 2.62E-5 T 15-10-2018 Trad_1530 8d4f519c234dcb96751c18e04f566b09 308 Gene3D G3DSA:1.10.3720.10 64 304 6.3E-70 T 15-10-2018 IPR035906 MetI-like superfamily Trad_1530 8d4f519c234dcb96751c18e04f566b09 308 SUPERFAMILY SSF161098 70 295 2.09E-59 T 15-10-2018 IPR035906 MetI-like superfamily Trad_1530 8d4f519c234dcb96751c18e04f566b09 308 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 99 299 1.4E-17 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Trad_2857 9eee5acf90a71325dda3d1139daebf78 307 Pfam PF00535 Glycosyl transferase family 2 13 120 2.9E-18 T 15-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Trad_2857 9eee5acf90a71325dda3d1139daebf78 307 SUPERFAMILY SSF53448 4 280 5.3E-45 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Trad_2857 9eee5acf90a71325dda3d1139daebf78 307 Gene3D G3DSA:3.90.550.10 4 248 2.4E-38 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Trad_0829 a0f2daa05079a2787562229b811301fe 268 Gene3D G3DSA:3.20.20.410 1 260 4.5E-84 T 15-10-2018 IPR036520 UPF0759 superfamily Trad_0829 a0f2daa05079a2787562229b811301fe 268 Pfam PF01904 Protein of unknown function DUF72 20 255 8.8E-58 T 15-10-2018 IPR002763 Protein of unknown function DUF72 Trad_0829 a0f2daa05079a2787562229b811301fe 268 SUPERFAMILY SSF117396 1 256 4.45E-74 T 15-10-2018 IPR036520 UPF0759 superfamily Trad_0251 12fa2f342e367905204d0b41a80be46a 197 Gene3D G3DSA:1.20.120.330 22 168 2.7E-9 T 15-10-2018 Trad_0251 12fa2f342e367905204d0b41a80be46a 197 SUPERFAMILY SSF158668 17 141 4.45E-23 T 15-10-2018 IPR038026 MtlR-like superfamily Trad_0251 12fa2f342e367905204d0b41a80be46a 197 Pfam PF05068 Mannitol repressor 69 145 3.3E-7 T 15-10-2018 IPR007761 Mannitol repressor MtlR-like Trad_2921 38490227e1770daf0d8cd4939056fff0 161 SMART SM00903 10 149 5.4E-53 T 15-10-2018 IPR002563 Flavin reductase like domain GO:0010181 Trad_2921 38490227e1770daf0d8cd4939056fff0 161 Pfam PF01613 Flavin reductase like domain 11 149 4.8E-34 T 15-10-2018 IPR002563 Flavin reductase like domain GO:0010181 Trad_2921 38490227e1770daf0d8cd4939056fff0 161 SUPERFAMILY SSF50475 1 149 5.4E-46 T 15-10-2018 Trad_2921 38490227e1770daf0d8cd4939056fff0 161 Gene3D G3DSA:2.30.110.10 1 155 3.0E-44 T 15-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Trad_1339 c6731b5288755abc9b1149d3214522c2 264 Gene3D G3DSA:3.30.70.1170 6 68 4.7E-13 T 15-10-2018 Trad_1339 c6731b5288755abc9b1149d3214522c2 264 PIRSF PIRSF000401 49 264 3.5E-56 T 15-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 Trad_1339 c6731b5288755abc9b1149d3214522c2 264 SUPERFAMILY SSF53335 57 258 2.07E-35 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Trad_1339 c6731b5288755abc9b1149d3214522c2 264 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 59 262 1.2E-55 T 15-10-2018 Trad_1339 c6731b5288755abc9b1149d3214522c2 264 Gene3D G3DSA:3.40.50.150 77 263 3.5E-43 T 15-10-2018 Trad_2744 6dd018b045d6ba58896141386b771417 112 Pfam PF12277 Protein of unknown function (DUF3618) 14 49 4.1E-10 T 15-10-2018 IPR022062 Protein of unknown function DUF3618 Trad_2048 0d7dee933ea1a10b8f95964848ecc433 359 Pfam PF03739 Predicted permease YjgP/YjgQ family 8 353 8.4E-66 T 15-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 Trad_0180 465c27fb98080bb2e79d6b54b4f49419 864 SUPERFAMILY SSF46548 274 396 1.31E-17 T 15-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Trad_0180 465c27fb98080bb2e79d6b54b4f49419 864 Pfam PF02754 Cysteine-rich domain 570 670 1.1E-10 T 15-10-2018 IPR004017 Cysteine-rich domain Trad_0180 465c27fb98080bb2e79d6b54b4f49419 864 Pfam PF02754 Cysteine-rich domain 447 532 3.1E-16 T 15-10-2018 IPR004017 Cysteine-rich domain Trad_0180 465c27fb98080bb2e79d6b54b4f49419 864 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 368 379 - T 15-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Trad_0180 465c27fb98080bb2e79d6b54b4f49419 864 SUPERFAMILY SSF103501 5 249 9.94E-9 T 15-10-2018 IPR036197 NarG-like superfamily Trad_0180 465c27fb98080bb2e79d6b54b4f49419 864 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 298 309 - T 15-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Trad_0180 465c27fb98080bb2e79d6b54b4f49419 864 Pfam PF13183 4Fe-4S dicluster domain 295 380 1.9E-11 T 15-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Trad_0180 465c27fb98080bb2e79d6b54b4f49419 864 Gene3D G3DSA:1.10.1060.10 275 401 4.0E-7 T 15-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Trad_2367 b02aec54249d9064d521b1d0aa973223 448 SUPERFAMILY SSF53738 165 261 1.45E-26 T 15-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Trad_2367 b02aec54249d9064d521b1d0aa973223 448 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 3 141 2.5E-42 T 15-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Trad_2367 b02aec54249d9064d521b1d0aa973223 448 SUPERFAMILY SSF53738 264 365 4.32E-26 T 15-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Trad_2367 b02aec54249d9064d521b1d0aa973223 448 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 177 259 1.2E-15 T 15-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Trad_2367 b02aec54249d9064d521b1d0aa973223 448 SUPERFAMILY SSF53738 2 170 7.85E-43 T 15-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Trad_2367 b02aec54249d9064d521b1d0aa973223 448 Gene3D G3DSA:3.40.120.10 4 161 2.6E-47 T 15-10-2018 Trad_2367 b02aec54249d9064d521b1d0aa973223 448 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 179 198 3.5E-13 T 15-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Trad_2367 b02aec54249d9064d521b1d0aa973223 448 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 100 114 3.5E-13 T 15-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Trad_2367 b02aec54249d9064d521b1d0aa973223 448 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 239 254 3.5E-13 T 15-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Trad_2367 b02aec54249d9064d521b1d0aa973223 448 Gene3D G3DSA:3.40.120.10 179 360 1.9E-60 T 15-10-2018 Trad_2367 b02aec54249d9064d521b1d0aa973223 448 Gene3D G3DSA:3.30.310.50 370 447 5.3E-22 T 15-10-2018 Trad_2367 b02aec54249d9064d521b1d0aa973223 448 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 373 442 1.8E-11 T 15-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Trad_2367 b02aec54249d9064d521b1d0aa973223 448 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 2 446 43.029 T 15-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Trad_2367 b02aec54249d9064d521b1d0aa973223 448 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 101 110 - T 15-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Trad_2367 b02aec54249d9064d521b1d0aa973223 448 SUPERFAMILY SSF55957 357 446 9.55E-20 T 15-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Trad_2367 b02aec54249d9064d521b1d0aa973223 448 Gene3D G3DSA:3.40.120.10 262 339 1.9E-60 T 15-10-2018 Trad_2367 b02aec54249d9064d521b1d0aa973223 448 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 6 444 6.7E-168 T 15-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Trad_2367 b02aec54249d9064d521b1d0aa973223 448 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 263 364 2.5E-28 T 15-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Trad_0757 8f38547416aeaa9a20f1b9fb2b3e1a6f 157 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 152 33.057 T 15-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 Trad_0757 8f38547416aeaa9a20f1b9fb2b3e1a6f 157 SUPERFAMILY SSF75217 2 152 8.5E-40 T 15-10-2018 IPR029028 Alpha/beta knot methyltransferases Trad_0757 8f38547416aeaa9a20f1b9fb2b3e1a6f 157 Gene3D G3DSA:3.40.1280.10 1 155 1.6E-58 T 15-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Trad_0757 8f38547416aeaa9a20f1b9fb2b3e1a6f 157 PIRSF PIRSF029256 1 154 1.9E-57 T 15-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 Trad_0757 8f38547416aeaa9a20f1b9fb2b3e1a6f 157 Pfam PF00588 SpoU rRNA Methylase family 2 143 2.7E-31 T 15-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 Trad_1173 4b838e3a77100bcc61f6f34865152fe0 396 Gene3D G3DSA:3.40.710.10 129 363 1.2E-67 T 15-10-2018 Trad_1173 4b838e3a77100bcc61f6f34865152fe0 396 Pfam PF13354 Beta-lactamase enzyme family 138 238 8.7E-23 T 15-10-2018 Trad_1173 4b838e3a77100bcc61f6f34865152fe0 396 Gene3D G3DSA:1.10.8.620 245 298 1.2E-67 T 15-10-2018 Trad_1173 4b838e3a77100bcc61f6f34865152fe0 396 SUPERFAMILY SSF56601 74 372 2.71E-26 T 15-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Trad_2874 8057aaa7d4acd0586419d1ad60cd12d4 1025 SUPERFAMILY SSF46785 954 1018 3.03E-16 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Trad_2874 8057aaa7d4acd0586419d1ad60cd12d4 1025 SUPERFAMILY SSF52540 631 916 8.56E-46 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_2874 8057aaa7d4acd0586419d1ad60cd12d4 1025 Pfam PF09397 Ftsk gamma domain 955 1014 1.4E-22 T 15-10-2018 IPR018541 FtsK gamma domain Trad_2874 8057aaa7d4acd0586419d1ad60cd12d4 1025 Gene3D G3DSA:3.40.50.300 655 931 2.2E-95 T 15-10-2018 Trad_2874 8057aaa7d4acd0586419d1ad60cd12d4 1025 SMART SM00382 693 869 3.8E-6 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_2874 8057aaa7d4acd0586419d1ad60cd12d4 1025 SMART SM00843 952 1017 5.0E-24 T 15-10-2018 IPR018541 FtsK gamma domain Trad_2874 8057aaa7d4acd0586419d1ad60cd12d4 1025 Pfam PF01580 FtsK/SpoIIIE family 798 848 5.7E-13 T 15-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 Trad_2874 8057aaa7d4acd0586419d1ad60cd12d4 1025 Pfam PF01580 FtsK/SpoIIIE family 659 794 2.8E-37 T 15-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 Trad_2874 8057aaa7d4acd0586419d1ad60cd12d4 1025 Gene3D G3DSA:3.30.980.40 548 654 1.8E-32 T 15-10-2018 Trad_2874 8057aaa7d4acd0586419d1ad60cd12d4 1025 Gene3D G3DSA:1.10.10.10 956 1017 5.8E-18 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Trad_2971 015b656c48a460bd0bf710d063e1bc93 387 SUPERFAMILY SSF53383 1 383 2.76E-115 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Trad_2971 015b656c48a460bd0bf710d063e1bc93 387 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 231 244 - T 15-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Trad_2971 015b656c48a460bd0bf710d063e1bc93 387 Pfam PF00155 Aminotransferase class I and II 32 379 4.3E-76 T 15-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Trad_2971 015b656c48a460bd0bf710d063e1bc93 387 Gene3D G3DSA:3.90.1150.10 24 378 2.1E-143 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Trad_2971 015b656c48a460bd0bf710d063e1bc93 387 Gene3D G3DSA:3.40.640.10 63 281 2.1E-143 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Trad_0199 5aebc8797a41592ffe979578801a7167 207 Pfam PF00106 short chain dehydrogenase 3 176 3.9E-22 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_0199 5aebc8797a41592ffe979578801a7167 207 SUPERFAMILY SSF51735 2 196 9.14E-38 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_0199 5aebc8797a41592ffe979578801a7167 207 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 122 150 - T 15-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Trad_0199 5aebc8797a41592ffe979578801a7167 207 Gene3D G3DSA:3.40.50.720 2 205 2.1E-40 T 15-10-2018 Trad_0199 5aebc8797a41592ffe979578801a7167 207 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 2 19 7.2E-11 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_0199 5aebc8797a41592ffe979578801a7167 207 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 64 75 7.2E-11 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_0199 5aebc8797a41592ffe979578801a7167 207 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 198 7.2E-11 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_0199 5aebc8797a41592ffe979578801a7167 207 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 154 7.2E-11 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2879 d880f77c8b515462c819c4c22adcfa24 413 Pfam PF13416 Bacterial extracellular solute-binding protein 52 347 3.0E-32 T 15-10-2018 IPR006059 Bacterial extracellular solute-binding protein Trad_2879 d880f77c8b515462c819c4c22adcfa24 413 SUPERFAMILY SSF53850 23 409 1.6E-64 T 15-10-2018 Trad_2879 d880f77c8b515462c819c4c22adcfa24 413 Gene3D G3DSA:3.40.190.10 21 411 1.0E-72 T 15-10-2018 Trad_2352 e2592dee422c5afe34243b731061862c 300 PIRSF PIRSF036979 1 299 1.9E-34 T 15-10-2018 IPR006035 Ureohydrolase GO:0046872 Trad_2352 e2592dee422c5afe34243b731061862c 300 TIGRFAM TIGR01229 rocF_arginase: arginase 3 299 1.3E-90 T 15-10-2018 IPR014033 Arginase GO:0004053|GO:0006525|GO:0046872 KEGG: 00220+3.5.3.1|KEGG: 00330+3.5.3.1|MetaCyc: PWY-31|MetaCyc: PWY-4984|MetaCyc: PWY-6305|MetaCyc: PWY-6922|Reactome: R-HSA-70635 Trad_2352 e2592dee422c5afe34243b731061862c 300 Pfam PF00491 Arginase family 2 295 7.2E-77 T 15-10-2018 IPR006035 Ureohydrolase GO:0046872 Trad_2352 e2592dee422c5afe34243b731061862c 300 PRINTS PR00116 Arginase signature 222 251 5.7E-47 T 15-10-2018 IPR006035 Ureohydrolase GO:0046872 Trad_2352 e2592dee422c5afe34243b731061862c 300 PRINTS PR00116 Arginase signature 257 271 5.7E-47 T 15-10-2018 IPR006035 Ureohydrolase GO:0046872 Trad_2352 e2592dee422c5afe34243b731061862c 300 PRINTS PR00116 Arginase signature 94 109 5.7E-47 T 15-10-2018 IPR006035 Ureohydrolase GO:0046872 Trad_2352 e2592dee422c5afe34243b731061862c 300 PRINTS PR00116 Arginase signature 120 147 5.7E-47 T 15-10-2018 IPR006035 Ureohydrolase GO:0046872 Trad_2352 e2592dee422c5afe34243b731061862c 300 PRINTS PR00116 Arginase signature 174 192 5.7E-47 T 15-10-2018 IPR006035 Ureohydrolase GO:0046872 Trad_2352 e2592dee422c5afe34243b731061862c 300 SUPERFAMILY SSF52768 2 297 1.71E-89 T 15-10-2018 IPR023696 Ureohydrolase domain superfamily Trad_2352 e2592dee422c5afe34243b731061862c 300 Gene3D G3DSA:3.40.800.10 1 300 2.6E-104 T 15-10-2018 Trad_2472 d0155c09f86d56104ecb27b41046dc74 306 SUPERFAMILY SSF103481 195 295 4.84E-14 T 15-10-2018 Trad_2472 d0155c09f86d56104ecb27b41046dc74 306 SUPERFAMILY SSF103481 44 145 1.83E-12 T 15-10-2018 Trad_2472 d0155c09f86d56104ecb27b41046dc74 306 Pfam PF00892 EamA-like transporter family 14 142 1.8E-12 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Trad_2472 d0155c09f86d56104ecb27b41046dc74 306 Pfam PF00892 EamA-like transporter family 156 291 1.1E-15 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Trad_1088 5e9eedfaab34d00a662f1c7a5b28720a 234 PIRSF PIRSF001461 10 233 1.0E-90 T 15-10-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 Trad_1088 5e9eedfaab34d00a662f1c7a5b28720a 234 SUPERFAMILY SSF51366 14 219 4.83E-71 T 15-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Trad_1088 5e9eedfaab34d00a662f1c7a5b28720a 234 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 15 215 2.7E-88 T 15-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 Trad_1088 5e9eedfaab34d00a662f1c7a5b28720a 234 Gene3D G3DSA:3.20.20.70 9 229 8.7E-82 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Trad_1088 5e9eedfaab34d00a662f1c7a5b28720a 234 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 43 57 - T 15-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 Trad_1088 5e9eedfaab34d00a662f1c7a5b28720a 234 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 145 167 - T 15-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 Trad_1088 5e9eedfaab34d00a662f1c7a5b28720a 234 Pfam PF00834 Ribulose-phosphate 3 epimerase family 15 212 1.4E-81 T 15-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 Trad_2171 8a95a8d2799876bf6610a0b5eb5932be 425 SUPERFAMILY SSF103473 9 408 2.35E-58 T 15-10-2018 IPR036259 MFS transporter superfamily Trad_2171 8a95a8d2799876bf6610a0b5eb5932be 425 Gene3D G3DSA:1.20.1250.20 6 408 1.5E-66 T 15-10-2018 Trad_2171 8a95a8d2799876bf6610a0b5eb5932be 425 ProSitePatterns PS00216 Sugar transport proteins signature 1. 71 87 - T 15-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 Trad_2171 8a95a8d2799876bf6610a0b5eb5932be 425 PRINTS PR01035 Tetracycline resistance protein signature 257 277 2.5E-61 T 15-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 Trad_2171 8a95a8d2799876bf6610a0b5eb5932be 425 PRINTS PR01035 Tetracycline resistance protein signature 285 306 2.5E-61 T 15-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 Trad_2171 8a95a8d2799876bf6610a0b5eb5932be 425 PRINTS PR01035 Tetracycline resistance protein signature 310 330 2.5E-61 T 15-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 Trad_2171 8a95a8d2799876bf6610a0b5eb5932be 425 PRINTS PR01035 Tetracycline resistance protein signature 111 132 2.5E-61 T 15-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 Trad_2171 8a95a8d2799876bf6610a0b5eb5932be 425 PRINTS PR01035 Tetracycline resistance protein signature 169 189 2.5E-61 T 15-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 Trad_2171 8a95a8d2799876bf6610a0b5eb5932be 425 PRINTS PR01035 Tetracycline resistance protein signature 345 368 2.5E-61 T 15-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 Trad_2171 8a95a8d2799876bf6610a0b5eb5932be 425 PRINTS PR01035 Tetracycline resistance protein signature 228 245 2.5E-61 T 15-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 Trad_2171 8a95a8d2799876bf6610a0b5eb5932be 425 PRINTS PR01035 Tetracycline resistance protein signature 84 108 2.5E-61 T 15-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 Trad_2171 8a95a8d2799876bf6610a0b5eb5932be 425 PRINTS PR01035 Tetracycline resistance protein signature 141 163 2.5E-61 T 15-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 Trad_2171 8a95a8d2799876bf6610a0b5eb5932be 425 PRINTS PR01035 Tetracycline resistance protein signature 22 38 2.5E-61 T 15-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 Trad_2171 8a95a8d2799876bf6610a0b5eb5932be 425 Pfam PF07690 Major Facilitator Superfamily 17 361 7.2E-46 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Trad_2241 f76cbbeea8921a9cc4c08c88ccd2a989 478 Pfam PF01593 Flavin containing amine oxidoreductase 14 272 1.0E-16 T 15-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 Trad_2241 f76cbbeea8921a9cc4c08c88ccd2a989 478 SUPERFAMILY SSF51905 4 473 6.15E-49 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Trad_2241 f76cbbeea8921a9cc4c08c88ccd2a989 478 TIGRFAM TIGR02734 crtI_fam: phytoene desaturase 7 474 4.4E-90 T 15-10-2018 IPR014105 Carotenoid/retinoid oxidoreductase GO:0016117|GO:0055114 Trad_2241 f76cbbeea8921a9cc4c08c88ccd2a989 478 Gene3D G3DSA:3.50.50.60 198 297 1.2E-13 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Trad_2241 f76cbbeea8921a9cc4c08c88ccd2a989 478 Gene3D G3DSA:3.50.50.60 4 111 1.1E-19 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Trad_0378 11593e79a6199c0923b7f691db49c6d2 358 SUPERFAMILY SSF53383 27 351 4.26E-62 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Trad_0378 11593e79a6199c0923b7f691db49c6d2 358 Pfam PF00155 Aminotransferase class I and II 28 346 4.5E-37 T 15-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Trad_0378 11593e79a6199c0923b7f691db49c6d2 358 Gene3D G3DSA:3.40.640.10 38 260 1.3E-79 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Trad_0378 11593e79a6199c0923b7f691db49c6d2 358 Gene3D G3DSA:3.90.1150.10 28 346 1.3E-79 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Trad_2402 a0d1342a00b9f9cf72d83dcf7de34c94 346 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 33 329 1.3E-37 T 15-10-2018 IPR005218 Diacylglycerol/lipid kinase Trad_2402 a0d1342a00b9f9cf72d83dcf7de34c94 346 Gene3D G3DSA:3.40.50.10330 26 158 2.4E-30 T 15-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 Trad_2402 a0d1342a00b9f9cf72d83dcf7de34c94 346 Pfam PF00781 Diacylglycerol kinase catalytic domain 33 153 1.1E-26 T 15-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 Trad_2402 a0d1342a00b9f9cf72d83dcf7de34c94 346 SMART SM00046 33 165 5.5E-8 T 15-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 Trad_2402 a0d1342a00b9f9cf72d83dcf7de34c94 346 SUPERFAMILY SSF111331 31 332 4.58E-70 T 15-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily Trad_2402 a0d1342a00b9f9cf72d83dcf7de34c94 346 Gene3D G3DSA:2.60.200.40 159 322 9.2E-41 T 15-10-2018 Trad_2681 aecfb01064b64dd710e1b7c343e2ada3 848 Gene3D G3DSA:1.10.1370.30 10 413 9.3E-155 T 15-10-2018 Trad_2681 aecfb01064b64dd710e1b7c343e2ada3 848 Pfam PF02074 Carboxypeptidase Taq (M32) metallopeptidase 24 413 4.9E-97 T 15-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 Trad_2681 aecfb01064b64dd710e1b7c343e2ada3 848 Gene3D G3DSA:3.40.30.10 657 840 4.1E-41 T 15-10-2018 Trad_2681 aecfb01064b64dd710e1b7c343e2ada3 848 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 339 358 4.1E-54 T 15-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 Trad_2681 aecfb01064b64dd710e1b7c343e2ada3 848 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 251 270 4.1E-54 T 15-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 Trad_2681 aecfb01064b64dd710e1b7c343e2ada3 848 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 271 290 4.1E-54 T 15-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 Trad_2681 aecfb01064b64dd710e1b7c343e2ada3 848 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 154 174 4.1E-54 T 15-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 Trad_2681 aecfb01064b64dd710e1b7c343e2ada3 848 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 298 314 4.1E-54 T 15-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 Trad_2681 aecfb01064b64dd710e1b7c343e2ada3 848 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 385 402 4.1E-54 T 15-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 Trad_2681 aecfb01064b64dd710e1b7c343e2ada3 848 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 234 250 4.1E-54 T 15-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 Trad_2681 aecfb01064b64dd710e1b7c343e2ada3 848 SUPERFAMILY SSF55486 15 412 1.04E-81 T 15-10-2018 Trad_2681 aecfb01064b64dd710e1b7c343e2ada3 848 SUPERFAMILY SSF52833 662 823 1.07E-30 T 15-10-2018 IPR036249 Thioredoxin-like superfamily Trad_2681 aecfb01064b64dd710e1b7c343e2ada3 848 Pfam PF13462 Thioredoxin 663 820 6.6E-25 T 15-10-2018 IPR012336 Thioredoxin-like fold Trad_0666 7e817e7e71fabba4d2f7a70aa2b69c6b 643 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 222 633 7.5E-106 T 15-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit Trad_0666 7e817e7e71fabba4d2f7a70aa2b69c6b 643 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 46 172 3.2E-28 T 15-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ Trad_0666 7e817e7e71fabba4d2f7a70aa2b69c6b 643 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 232 638 3.2E-120 T 15-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 Trad_2563 5811b4875cf5922ef7ddd7e469075dca 437 Gene3D G3DSA:3.30.460.10 2 118 2.1E-16 T 15-10-2018 Trad_2563 5811b4875cf5922ef7ddd7e469075dca 437 SMART SM00471 224 356 0.0013 T 15-10-2018 IPR003607 HD/PDEase domain Trad_2563 5811b4875cf5922ef7ddd7e469075dca 437 Gene3D G3DSA:1.10.3090.10 119 413 1.2E-35 T 15-10-2018 Trad_2563 5811b4875cf5922ef7ddd7e469075dca 437 TIGRFAM TIGR00277 HDIG: HDIG domain 220 297 2.7E-11 T 15-10-2018 IPR006675 HDIG domain Trad_2563 5811b4875cf5922ef7ddd7e469075dca 437 SUPERFAMILY SSF81301 13 120 9.7E-20 T 15-10-2018 Trad_2563 5811b4875cf5922ef7ddd7e469075dca 437 Pfam PF01966 HD domain 234 346 9.5E-14 T 15-10-2018 IPR006674 HD domain Trad_2563 5811b4875cf5922ef7ddd7e469075dca 437 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 148 214 9.5E-9 T 15-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 Trad_2563 5811b4875cf5922ef7ddd7e469075dca 437 SUPERFAMILY SSF81891 122 426 2.09E-46 T 15-10-2018 Trad_2337 1426cbd52c4a7f3af3289089a0759b4f 196 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 26 136 2.6E-13 T 15-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 Trad_2337 1426cbd52c4a7f3af3289089a0759b4f 196 TIGRFAM TIGR01668 YqeG_hyp_ppase: HAD phosphatase, family IIIA 3 157 6.9E-38 T 15-10-2018 IPR010021 HAD-superfamily phosphatase, YqeG-like Trad_2337 1426cbd52c4a7f3af3289089a0759b4f 196 SUPERFAMILY SSF56784 5 135 3.28E-23 T 15-10-2018 IPR036412 HAD-like superfamily Trad_2337 1426cbd52c4a7f3af3289089a0759b4f 196 Pfam PF13242 HAD-hyrolase-like 88 134 4.9E-11 T 15-10-2018 Trad_2337 1426cbd52c4a7f3af3289089a0759b4f 196 Gene3D G3DSA:3.40.50.1000 23 147 1.5E-21 T 15-10-2018 IPR023214 HAD superfamily Trad_1052 f4efce464224e1d1f9e5d93f9564cd4c 131 ProSitePatterns PS00053 Ribosomal protein S8 signature. 101 118 - T 15-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Trad_1052 f4efce464224e1d1f9e5d93f9564cd4c 131 Pfam PF00410 Ribosomal protein S8 4 131 1.8E-44 T 15-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Trad_1052 f4efce464224e1d1f9e5d93f9564cd4c 131 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 1 131 30.288 T 15-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Trad_1052 f4efce464224e1d1f9e5d93f9564cd4c 131 Gene3D G3DSA:3.30.1490.10 77 131 9.6E-24 T 15-10-2018 Trad_1052 f4efce464224e1d1f9e5d93f9564cd4c 131 Gene3D G3DSA:3.30.1370.30 3 76 5.6E-26 T 15-10-2018 Trad_1052 f4efce464224e1d1f9e5d93f9564cd4c 131 SUPERFAMILY SSF56047 1 131 1.13E-41 T 15-10-2018 IPR035987 Ribosomal protein S8 superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Trad_0996 9221e7ca7c71f4cbceb0fb7136cd3e5e 180 Gene3D G3DSA:2.60.120.10 10 177 2.5E-59 T 15-10-2018 IPR014710 RmlC-like jelly roll fold Trad_0996 9221e7ca7c71f4cbceb0fb7136cd3e5e 180 SUPERFAMILY SSF51182 54 175 1.9E-9 T 15-10-2018 IPR011051 RmlC-like cupin domain superfamily Trad_0996 9221e7ca7c71f4cbceb0fb7136cd3e5e 180 Pfam PF07385 D-lyxose isomerase 28 178 1.5E-8 T 15-10-2018 IPR010864 D-lyxose isomerase KEGG: 00040+5.3.1.15 Trad_1650 2b9d637679a4817e833ce3a269510bff 279 Gene3D G3DSA:3.50.30.50 41 279 3.9E-74 T 15-10-2018 IPR037175 Kynurenine formamidase superfamily GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 Trad_1650 2b9d637679a4817e833ce3a269510bff 279 Pfam PF04199 Putative cyclase 56 220 4.3E-33 T 15-10-2018 IPR007325 Kynurenine formamidase/cyclase-like GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 Trad_1650 2b9d637679a4817e833ce3a269510bff 279 SUPERFAMILY SSF102198 53 277 8.37E-53 T 15-10-2018 IPR037175 Kynurenine formamidase superfamily GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 Trad_0895 e4597af7eb4eb4dbb778dc48afec6e79 355 PIRSF PIRSF001123 14 355 1.1E-104 T 15-10-2018 IPR008007 Peptidase M42 Trad_0895 e4597af7eb4eb4dbb778dc48afec6e79 355 Gene3D G3DSA:3.40.630.10 19 348 2.1E-113 T 15-10-2018 Trad_0895 e4597af7eb4eb4dbb778dc48afec6e79 355 SUPERFAMILY SSF53187 17 354 6.52E-61 T 15-10-2018 Trad_0895 e4597af7eb4eb4dbb778dc48afec6e79 355 SUPERFAMILY SSF101821 83 190 4.88E-20 T 15-10-2018 Trad_0895 e4597af7eb4eb4dbb778dc48afec6e79 355 Pfam PF05343 M42 glutamyl aminopeptidase 57 348 2.2E-85 T 15-10-2018 IPR008007 Peptidase M42 Trad_0895 e4597af7eb4eb4dbb778dc48afec6e79 355 Gene3D G3DSA:2.40.30.40 82 174 2.1E-113 T 15-10-2018 IPR023367 Peptidase M42, domain 2 Trad_1761 a5c4611c72eca3526353a41c3f3555db 109 SUPERFAMILY SSF51182 3 103 2.45E-17 T 15-10-2018 IPR011051 RmlC-like cupin domain superfamily Trad_1761 a5c4611c72eca3526353a41c3f3555db 109 Gene3D G3DSA:2.60.120.10 1 105 1.7E-24 T 15-10-2018 IPR014710 RmlC-like jelly roll fold Trad_1761 a5c4611c72eca3526353a41c3f3555db 109 Pfam PF07883 Cupin domain 34 99 1.1E-16 T 15-10-2018 IPR013096 Cupin 2, conserved barrel Trad_2601 e9773ec49e728cfd4a8b25217864540a 238 Gene3D G3DSA:2.40.360.20 130 229 1.2E-5 T 15-10-2018 Trad_1725 8f9e4596b079b81702c105e2d4a8c1b8 308 Pfam PF09084 NMT1/THI5 like 21 234 1.8E-53 T 15-10-2018 IPR015168 SsuA/THI5-like Trad_1725 8f9e4596b079b81702c105e2d4a8c1b8 308 Gene3D G3DSA:3.40.190.10 93 194 1.5E-66 T 15-10-2018 Trad_1725 8f9e4596b079b81702c105e2d4a8c1b8 308 SUPERFAMILY SSF53850 14 288 4.27E-25 T 15-10-2018 Trad_1725 8f9e4596b079b81702c105e2d4a8c1b8 308 Gene3D G3DSA:3.40.190.10 14 278 1.5E-66 T 15-10-2018 Trad_1962 544b14c2461fc2f701363761e2fbe0a5 324 SUPERFAMILY SSF51430 1 323 7.86E-78 T 15-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Trad_1962 544b14c2461fc2f701363761e2fbe0a5 324 Gene3D G3DSA:3.20.20.100 1 324 9.8E-94 T 15-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Trad_1962 544b14c2461fc2f701363761e2fbe0a5 324 Pfam PF00248 Aldo/keto reductase family 16 315 9.1E-58 T 15-10-2018 IPR023210 NADP-dependent oxidoreductase domain Trad_2539 b069a8ba0d27d8119a25ee9246938664 259 Pfam PF02817 e3 binding domain 9 39 6.3E-8 T 15-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 Trad_2539 b069a8ba0d27d8119a25ee9246938664 259 SUPERFAMILY SSF47005 8 43 1.57E-7 T 15-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 Trad_2539 b069a8ba0d27d8119a25ee9246938664 259 Gene3D G3DSA:4.10.320.10 6 48 2.9E-11 T 15-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 Trad_2126 147f673c7a012fc5d14ef42f651e2561 394 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 33 387 7.8E-96 T 15-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase Trad_2126 147f673c7a012fc5d14ef42f651e2561 394 Gene3D G3DSA:3.90.1150.10 267 393 2.7E-35 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Trad_2126 147f673c7a012fc5d14ef42f651e2561 394 SUPERFAMILY SSF53383 26 390 5.84E-100 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Trad_2126 147f673c7a012fc5d14ef42f651e2561 394 PIRSF PIRSF000390 18 393 5.0E-104 T 15-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase Trad_2126 147f673c7a012fc5d14ef42f651e2561 394 Gene3D G3DSA:3.40.640.10 4 265 2.1E-88 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Trad_1569 6a671628b2b3d81552125a6a733a3f09 389 Pfam PF01565 FAD binding domain 16 138 8.1E-19 T 15-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 Trad_1569 6a671628b2b3d81552125a6a733a3f09 389 SUPERFAMILY SSF56176 15 177 3.04E-32 T 15-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Trad_1569 6a671628b2b3d81552125a6a733a3f09 389 Gene3D G3DSA:3.30.465.40 3 192 5.9E-33 T 15-10-2018 Trad_1569 6a671628b2b3d81552125a6a733a3f09 389 SUPERFAMILY SSF55103 140 378 1.37E-8 T 15-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 Trad_0944 08cca91d2ee7e56f0efec3245f862491 450 Gene3D G3DSA:3.30.70.360 193 361 5.3E-163 T 15-10-2018 Trad_0944 08cca91d2ee7e56f0efec3245f862491 450 Pfam PF07687 Peptidase dimerisation domain 191 346 5.5E-15 T 15-10-2018 IPR011650 Peptidase M20, dimerisation domain Trad_0944 08cca91d2ee7e56f0efec3245f862491 450 Pfam PF01546 Peptidase family M20/M25/M40 80 444 6.9E-37 T 15-10-2018 IPR002933 Peptidase M20 GO:0016787 Trad_0944 08cca91d2ee7e56f0efec3245f862491 450 SUPERFAMILY SSF53187 2 447 2.11E-55 T 15-10-2018 Trad_0944 08cca91d2ee7e56f0efec3245f862491 450 Gene3D G3DSA:3.40.630.10 23 433 5.3E-163 T 15-10-2018 Trad_1873 b5c09f7e884ac56e04c056501c00e776 398 Gene3D G3DSA:3.40.50.1970 10 191 1.9E-50 T 15-10-2018 Trad_1873 b5c09f7e884ac56e04c056501c00e776 398 Gene3D G3DSA:1.20.1090.10 192 382 1.1E-50 T 15-10-2018 Trad_1873 b5c09f7e884ac56e04c056501c00e776 398 Pfam PF01761 3-dehydroquinate synthase 85 335 5.7E-74 T 15-10-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 Trad_1873 b5c09f7e884ac56e04c056501c00e776 398 SUPERFAMILY SSF56796 10 374 1.96E-86 T 15-10-2018 Trad_1410 32c462a66e75837e2022427c1303019a 469 SUPERFAMILY SSF53187 17 467 5.71E-70 T 15-10-2018 Trad_1410 32c462a66e75837e2022427c1303019a 469 Gene3D G3DSA:3.40.630.10 26 458 1.2E-170 T 15-10-2018 Trad_1410 32c462a66e75837e2022427c1303019a 469 Pfam PF07687 Peptidase dimerisation domain 207 367 5.6E-25 T 15-10-2018 IPR011650 Peptidase M20, dimerisation domain Trad_1410 32c462a66e75837e2022427c1303019a 469 SUPERFAMILY SSF55031 284 377 5.76E-6 T 15-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain Trad_1410 32c462a66e75837e2022427c1303019a 469 Gene3D G3DSA:3.30.70.360 210 380 1.2E-170 T 15-10-2018 Trad_1410 32c462a66e75837e2022427c1303019a 469 Pfam PF01546 Peptidase family M20/M25/M40 96 463 6.2E-40 T 15-10-2018 IPR002933 Peptidase M20 GO:0016787 Trad_2938 162f509a41bac2682722b4503b618dc0 406 SUPERFAMILY SSF53383 7 404 7.93E-81 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Trad_2938 162f509a41bac2682722b4503b618dc0 406 Pfam PF00266 Aminotransferase class-V 23 397 7.1E-58 T 15-10-2018 IPR000192 Aminotransferase class V domain Trad_2938 162f509a41bac2682722b4503b618dc0 406 Gene3D G3DSA:3.90.1150.10 23 402 3.9E-115 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Trad_2938 162f509a41bac2682722b4503b618dc0 406 TIGRFAM TIGR01976 am_tr_V_VC1184: cysteine desulfurase family protein 6 402 1.8E-115 T 15-10-2018 IPR011340 Cysteine desulfurase-related Trad_2938 162f509a41bac2682722b4503b618dc0 406 Gene3D G3DSA:3.40.640.10 31 288 3.9E-115 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Trad_1396 9f590d781c5aa3018983f9a9dbaad25f 480 SUPERFAMILY SSF51338 5 68 4.68E-11 T 15-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Trad_1396 9f590d781c5aa3018983f9a9dbaad25f 480 Gene3D G3DSA:3.20.20.140 60 377 2.3E-107 T 15-10-2018 Trad_1396 9f590d781c5aa3018983f9a9dbaad25f 480 Pfam PF01979 Amidohydrolase family 56 426 3.3E-38 T 15-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Trad_1396 9f590d781c5aa3018983f9a9dbaad25f 480 Gene3D G3DSA:2.30.40.10 19 427 2.3E-107 T 15-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Trad_1396 9f590d781c5aa3018983f9a9dbaad25f 480 SUPERFAMILY SSF51338 351 454 1.07E-29 T 15-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Trad_1396 9f590d781c5aa3018983f9a9dbaad25f 480 SUPERFAMILY SSF51556 59 377 6.56E-58 T 15-10-2018 IPR032466 Metal-dependent hydrolase Trad_2567 ad303268f7ff2f66c0c357da0e46b860 391 Gene3D G3DSA:3.40.640.10 65 286 1.3E-107 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Trad_2567 ad303268f7ff2f66c0c357da0e46b860 391 Gene3D G3DSA:3.90.1150.10 34 383 1.3E-107 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Trad_2567 ad303268f7ff2f66c0c357da0e46b860 391 SUPERFAMILY SSF53383 6 389 2.99E-101 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Trad_2567 ad303268f7ff2f66c0c357da0e46b860 391 Pfam PF00155 Aminotransferase class I and II 34 383 1.9E-53 T 15-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Trad_1590 ea5f60ece4218c6af66e535091602450 225 Gene3D G3DSA:3.40.50.2300 1 124 1.0E-35 T 15-10-2018 Trad_1590 ea5f60ece4218c6af66e535091602450 225 SMART SM00862 148 222 3.5E-26 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Trad_1590 ea5f60ece4218c6af66e535091602450 225 Pfam PF00072 Response regulator receiver domain 7 116 5.1E-26 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Trad_1590 ea5f60ece4218c6af66e535091602450 225 SMART SM00448 5 115 2.0E-40 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Trad_1590 ea5f60ece4218c6af66e535091602450 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 222 5.6E-24 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Trad_1590 ea5f60ece4218c6af66e535091602450 225 Gene3D G3DSA:1.10.10.10 126 225 2.2E-30 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Trad_1590 ea5f60ece4218c6af66e535091602450 225 SUPERFAMILY SSF52172 4 175 2.41E-40 T 15-10-2018 IPR011006 CheY-like superfamily Trad_2002 6328f45c771074c7583039398d9232df 302 TIGRFAM TIGR03381 agmatine_aguB: N-carbamoylputrescine amidase 15 289 5.2E-126 T 15-10-2018 IPR017755 N-carbamoylputrescine amidase GO:0006596|GO:0050126 KEGG: 00330+3.5.1.53|MetaCyc: PWY-43 Trad_2002 6328f45c771074c7583039398d9232df 302 Pfam PF00795 Carbon-nitrogen hydrolase 16 273 3.0E-52 T 15-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 Trad_2002 6328f45c771074c7583039398d9232df 302 SUPERFAMILY SSF56317 14 290 1.05E-80 T 15-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Trad_2002 6328f45c771074c7583039398d9232df 302 Gene3D G3DSA:3.60.110.10 6 299 3.7E-105 T 15-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Trad_1244 152471954d6a50af312af6e2a43befb0 226 Pfam PF07849 Protein of unknown function (DUF1641) 179 215 4.2E-10 T 15-10-2018 IPR012440 Protein of unknown function DUF1641 Trad_1398 6047f6e89387a1d16f68ba2f3c472e22 135 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 3 130 11.417 T 15-10-2018 IPR022907 VapC family GO:0004540 Trad_1398 6047f6e89387a1d16f68ba2f3c472e22 135 SUPERFAMILY SSF88723 4 123 3.08E-21 T 15-10-2018 IPR029060 PIN-like domain superfamily Trad_1398 6047f6e89387a1d16f68ba2f3c472e22 135 Pfam PF01850 PIN domain 5 118 3.8E-11 T 15-10-2018 IPR002716 PIN domain Trad_1398 6047f6e89387a1d16f68ba2f3c472e22 135 Gene3D G3DSA:3.40.50.1010 2 127 1.1E-21 T 15-10-2018 Trad_0870 71361d34e4613296d6dc0abf168272b8 174 Gene3D G3DSA:2.60.40.1220 100 168 1.4E-7 T 15-10-2018 Trad_0870 71361d34e4613296d6dc0abf168272b8 174 Gene3D G3DSA:2.60.40.1220 19 99 1.2E-9 T 15-10-2018 Trad_0870 71361d34e4613296d6dc0abf168272b8 174 SUPERFAMILY SSF81296 19 60 1.82E-7 T 15-10-2018 IPR014756 Immunoglobulin E-set Trad_0870 71361d34e4613296d6dc0abf168272b8 174 Pfam PF04234 CopC domain 20 168 2.0E-17 T 15-10-2018 IPR007348 CopC domain GO:0005507|GO:0042597|GO:0046688 Trad_0870 71361d34e4613296d6dc0abf168272b8 174 SUPERFAMILY SSF81296 109 168 4.62E-7 T 15-10-2018 IPR014756 Immunoglobulin E-set Trad_0469 259ef1c68194d5689292f3e4b9a3adaf 1022 Pfam PF09261 Alpha mannosidase middle domain 511 589 3.1E-26 T 15-10-2018 IPR015341 Glycoside hydrolase family 38, central domain GO:0004559|GO:0006013 Trad_0469 259ef1c68194d5689292f3e4b9a3adaf 1022 SMART SM00872 511 590 7.1E-36 T 15-10-2018 IPR015341 Glycoside hydrolase family 38, central domain GO:0004559|GO:0006013 Trad_0469 259ef1c68194d5689292f3e4b9a3adaf 1022 Gene3D G3DSA:3.20.110.10 236 511 1.6E-56 T 15-10-2018 IPR027291 Glycoside hydrolase 38, N-terminal domain superfamily Trad_0469 259ef1c68194d5689292f3e4b9a3adaf 1022 SUPERFAMILY SSF74650 612 1021 8.47E-90 T 15-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 Trad_0469 259ef1c68194d5689292f3e4b9a3adaf 1022 SUPERFAMILY SSF88688 510 618 1.47E-26 T 15-10-2018 IPR028995 Glycoside hydrolase families 57/38, central domain superfamily Trad_0469 259ef1c68194d5689292f3e4b9a3adaf 1022 Pfam PF01074 Glycosyl hydrolases family 38 N-terminal domain 239 501 5.9E-83 T 15-10-2018 IPR000602 Glycoside hydrolase family 38, N-terminal domain GO:0004559|GO:0006013 Trad_0469 259ef1c68194d5689292f3e4b9a3adaf 1022 Gene3D G3DSA:2.70.98.30 677 918 1.8E-20 T 15-10-2018 Trad_0469 259ef1c68194d5689292f3e4b9a3adaf 1022 Gene3D G3DSA:1.20.1270.50 514 613 7.7E-30 T 15-10-2018 IPR037094 Glycoside hydrolase family 38, central domain superfamily GO:0004559|GO:0006013 Trad_0469 259ef1c68194d5689292f3e4b9a3adaf 1022 Pfam PF07748 Glycosyl hydrolases family 38 C-terminal domain 617 1018 8.9E-77 T 15-10-2018 IPR011682 Glycosyl hydrolase family 38, C-terminal GO:0004559|GO:0006013 Trad_0469 259ef1c68194d5689292f3e4b9a3adaf 1022 SUPERFAMILY SSF88713 238 509 4.13E-72 T 15-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 Trad_2972 2a9450d82ada3c9dcbf2a6bfb59669a6 145 SUPERFAMILY SSF54919 7 144 8.64E-62 T 15-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Trad_2972 2a9450d82ada3c9dcbf2a6bfb59669a6 145 Pfam PF00334 Nucleoside diphosphate kinase 10 143 5.2E-60 T 15-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Trad_2972 2a9450d82ada3c9dcbf2a6bfb59669a6 145 Gene3D G3DSA:3.30.70.141 2 145 2.5E-64 T 15-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Trad_2972 2a9450d82ada3c9dcbf2a6bfb59669a6 145 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 120 128 - T 15-10-2018 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Trad_2972 2a9450d82ada3c9dcbf2a6bfb59669a6 145 SMART SM00562 9 145 6.6E-89 T 15-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Trad_2972 2a9450d82ada3c9dcbf2a6bfb59669a6 145 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 9 144 37.718 T 15-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Trad_2972 2a9450d82ada3c9dcbf2a6bfb59669a6 145 PRINTS PR01243 Nucleoside diphosphate kinase signature 56 75 1.9E-48 T 15-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Trad_2972 2a9450d82ada3c9dcbf2a6bfb59669a6 145 PRINTS PR01243 Nucleoside diphosphate kinase signature 76 93 1.9E-48 T 15-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Trad_2972 2a9450d82ada3c9dcbf2a6bfb59669a6 145 PRINTS PR01243 Nucleoside diphosphate kinase signature 120 139 1.9E-48 T 15-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Trad_2972 2a9450d82ada3c9dcbf2a6bfb59669a6 145 PRINTS PR01243 Nucleoside diphosphate kinase signature 12 34 1.9E-48 T 15-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Trad_2972 2a9450d82ada3c9dcbf2a6bfb59669a6 145 PRINTS PR01243 Nucleoside diphosphate kinase signature 97 113 1.9E-48 T 15-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Trad_1501 a704c8e8183bb09421ef3cd22b9e9739 93 Gene3D G3DSA:3.40.250.10 2 93 1.1E-16 T 15-10-2018 IPR036873 Rhodanese-like domain superfamily Trad_1501 a704c8e8183bb09421ef3cd22b9e9739 93 SUPERFAMILY SSF52821 3 90 1.3E-17 T 15-10-2018 IPR036873 Rhodanese-like domain superfamily Trad_1501 a704c8e8183bb09421ef3cd22b9e9739 93 Pfam PF00581 Rhodanese-like domain 10 90 1.7E-7 T 15-10-2018 IPR001763 Rhodanese-like domain Trad_1501 a704c8e8183bb09421ef3cd22b9e9739 93 SMART SM00450 3 93 2.7E-6 T 15-10-2018 IPR001763 Rhodanese-like domain Trad_2040 fd46cf876ca465a490464299c458fafe 489 SUPERFAMILY SSF161098 234 475 4.97E-55 T 15-10-2018 IPR035906 MetI-like superfamily Trad_2040 fd46cf876ca465a490464299c458fafe 489 Gene3D G3DSA:1.10.3720.10 244 481 9.1E-66 T 15-10-2018 IPR035906 MetI-like superfamily Trad_2040 fd46cf876ca465a490464299c458fafe 489 SUPERFAMILY SSF160964 20 85 6.93E-12 T 15-10-2018 Trad_2040 fd46cf876ca465a490464299c458fafe 489 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 267 479 2.6E-18 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Trad_1674 cb82206e216b50b4dc07612bc03139cb 373 SMART SM01007 205 363 3.7E-4 T 15-10-2018 IPR001303 Class II aldolase/adducin N-terminal Trad_1674 cb82206e216b50b4dc07612bc03139cb 373 Gene3D G3DSA:3.40.225.10 205 364 6.9E-21 T 15-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily Trad_1674 cb82206e216b50b4dc07612bc03139cb 373 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 215 303 1.3E-9 T 15-10-2018 IPR001303 Class II aldolase/adducin N-terminal Trad_1674 cb82206e216b50b4dc07612bc03139cb 373 SUPERFAMILY SSF53639 215 362 2.75E-17 T 15-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily Trad_1795 209c4552281b4e7e5927e086b1c84ac2 148 Pfam PF00582 Universal stress protein family 1 142 1.3E-27 T 15-10-2018 IPR006016 UspA Trad_1795 209c4552281b4e7e5927e086b1c84ac2 148 Gene3D G3DSA:3.40.50.620 1 143 6.9E-35 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Trad_1795 209c4552281b4e7e5927e086b1c84ac2 148 PRINTS PR01438 Universal stress protein signature 120 142 4.3E-15 T 15-10-2018 IPR006015 Universal stress protein A Trad_1795 209c4552281b4e7e5927e086b1c84ac2 148 PRINTS PR01438 Universal stress protein signature 102 114 4.3E-15 T 15-10-2018 IPR006015 Universal stress protein A Trad_1795 209c4552281b4e7e5927e086b1c84ac2 148 PRINTS PR01438 Universal stress protein signature 1 17 4.3E-15 T 15-10-2018 IPR006015 Universal stress protein A Trad_1795 209c4552281b4e7e5927e086b1c84ac2 148 SUPERFAMILY SSF52402 1 144 1.17E-32 T 15-10-2018 Trad_1541 ba19dda084f6d8821556000ff8519fdd 428 ProSitePatterns PS00161 Isocitrate lyase signature. 188 193 - T 15-10-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 Trad_1541 ba19dda084f6d8821556000ff8519fdd 428 SUPERFAMILY SSF51621 3 427 3.68E-154 T 15-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Trad_1541 ba19dda084f6d8821556000ff8519fdd 428 Pfam PF00463 Isocitrate lyase family 17 254 2.0E-58 T 15-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 Trad_1541 ba19dda084f6d8821556000ff8519fdd 428 PIRSF PIRSF001362 1 428 1.9E-235 T 15-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 Trad_1541 ba19dda084f6d8821556000ff8519fdd 428 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 13 250 6.7E-104 T 15-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 Trad_1541 ba19dda084f6d8821556000ff8519fdd 428 Gene3D G3DSA:3.20.20.60 6 410 3.7E-170 T 15-10-2018 Trad_0418 0ae4fa5d42167a05e28cf8189a719af4 243 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 155 178 4.6E-16 T 15-10-2018 Trad_0418 0ae4fa5d42167a05e28cf8189a719af4 243 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 49 70 4.6E-16 T 15-10-2018 Trad_0418 0ae4fa5d42167a05e28cf8189a719af4 243 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 98 121 4.6E-16 T 15-10-2018 Trad_0418 0ae4fa5d42167a05e28cf8189a719af4 243 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 123 141 4.6E-16 T 15-10-2018 Trad_0418 0ae4fa5d42167a05e28cf8189a719af4 243 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 75 92 4.6E-16 T 15-10-2018 Trad_0418 0ae4fa5d42167a05e28cf8189a719af4 243 Pfam PF03379 CcmB protein 26 238 5.0E-43 T 15-10-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 Trad_0418 0ae4fa5d42167a05e28cf8189a719af4 243 PIRSF PIRSF002764 21 241 2.3E-42 T 15-10-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria Trad_2800 0f83350adee906f4291a0debb1cf2ef3 493 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 7 492 6.7E-170 T 15-10-2018 IPR004482 Mg chelatase-related protein Trad_2800 0f83350adee906f4291a0debb1cf2ef3 493 Pfam PF01078 Magnesium chelatase, subunit ChlI 189 393 1.7E-93 T 15-10-2018 IPR000523 Magnesium chelatase ChlI domain Trad_2800 0f83350adee906f4291a0debb1cf2ef3 493 SUPERFAMILY SSF52540 186 491 2.71E-46 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_2800 0f83350adee906f4291a0debb1cf2ef3 493 Pfam PF13541 Subunit ChlI of Mg-chelatase 20 140 2.4E-43 T 15-10-2018 Trad_2800 0f83350adee906f4291a0debb1cf2ef3 493 SMART SM00382 209 345 7.5E-6 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_2800 0f83350adee906f4291a0debb1cf2ef3 493 SUPERFAMILY SSF54211 7 169 4.93E-33 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Trad_2800 0f83350adee906f4291a0debb1cf2ef3 493 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 400 492 1.3E-26 T 15-10-2018 IPR025158 Mg chelatase-related protein, C-terminal domain Trad_2800 0f83350adee906f4291a0debb1cf2ef3 493 Gene3D G3DSA:3.30.230.10 16 169 1.3E-8 T 15-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Trad_2800 0f83350adee906f4291a0debb1cf2ef3 493 Gene3D G3DSA:3.40.50.300 191 492 2.9E-53 T 15-10-2018 Trad_0505 9351e1f70da2b2362e2783b84c87171f 623 Pfam PF00664 ABC transporter transmembrane region 34 298 7.5E-22 T 15-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Trad_0505 9351e1f70da2b2362e2783b84c87171f 623 ProSitePatterns PS00211 ABC transporters family signature. 487 501 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Trad_0505 9351e1f70da2b2362e2783b84c87171f 623 SUPERFAMILY SSF90123 12 326 6.8E-54 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Trad_0505 9351e1f70da2b2362e2783b84c87171f 623 SUPERFAMILY SSF52540 339 582 3.13E-65 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_0505 9351e1f70da2b2362e2783b84c87171f 623 SMART SM00382 371 561 1.4E-12 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_0505 9351e1f70da2b2362e2783b84c87171f 623 Gene3D G3DSA:3.40.50.300 343 595 4.7E-72 T 15-10-2018 Trad_0505 9351e1f70da2b2362e2783b84c87171f 623 Pfam PF00005 ABC transporter 362 514 5.8E-26 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Trad_0505 9351e1f70da2b2362e2783b84c87171f 623 Gene3D G3DSA:1.20.1560.10 5 332 3.8E-55 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Trad_1679 3c4c6ab6908a87232423d1392683fbe4 96 Pfam PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) 30 79 2.7E-11 T 15-10-2018 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 Trad_0880 88b9de7f5a892ddbec6f0696036ad770 223 Gene3D G3DSA:1.20.58.220 113 220 5.1E-32 T 15-10-2018 IPR038078 PhoU-like domain superfamily Trad_0880 88b9de7f5a892ddbec6f0696036ad770 223 Gene3D G3DSA:1.20.58.220 1 112 9.5E-28 T 15-10-2018 IPR038078 PhoU-like domain superfamily Trad_0880 88b9de7f5a892ddbec6f0696036ad770 223 SUPERFAMILY SSF109755 8 219 1.05E-56 T 15-10-2018 Trad_0880 88b9de7f5a892ddbec6f0696036ad770 223 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 10 217 1.4E-54 T 15-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 Trad_0880 88b9de7f5a892ddbec6f0696036ad770 223 PIRSF PIRSF003107 4 222 9.9E-56 T 15-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 Trad_0880 88b9de7f5a892ddbec6f0696036ad770 223 Pfam PF01895 PhoU domain 22 107 9.2E-16 T 15-10-2018 IPR026022 PhoU domain Trad_0880 88b9de7f5a892ddbec6f0696036ad770 223 Pfam PF01895 PhoU domain 126 207 1.9E-18 T 15-10-2018 IPR026022 PhoU domain Trad_2350 b3fc3947c0fd46f7b855a894c83a1629 610 Gene3D G3DSA:3.40.50.300 342 593 3.0E-88 T 15-10-2018 Trad_2350 b3fc3947c0fd46f7b855a894c83a1629 610 Pfam PF00005 ABC transporter 373 523 1.5E-34 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Trad_2350 b3fc3947c0fd46f7b855a894c83a1629 610 SMART SM00382 382 569 1.4E-16 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_2350 b3fc3947c0fd46f7b855a894c83a1629 610 SUPERFAMILY SSF90123 26 340 1.57E-51 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Trad_2350 b3fc3947c0fd46f7b855a894c83a1629 610 ProSitePatterns PS00211 ABC transporters family signature. 495 509 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Trad_2350 b3fc3947c0fd46f7b855a894c83a1629 610 Gene3D G3DSA:1.20.1560.10 27 340 2.4E-54 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Trad_2350 b3fc3947c0fd46f7b855a894c83a1629 610 Pfam PF00664 ABC transporter transmembrane region 47 309 4.6E-24 T 15-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Trad_2350 b3fc3947c0fd46f7b855a894c83a1629 610 SUPERFAMILY SSF52540 349 591 5.01E-89 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_0826 1e132bdb0551e8c8e42166f620f8a2c5 322 Pfam PF12679 ABC-2 family transporter protein 19 319 1.0E-33 T 15-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 Trad_0092 9785267c7df746dfccebcc0e1fdcf22c 403 SUPERFAMILY SSF48264 38 375 2.1E-50 T 15-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 Trad_0092 9785267c7df746dfccebcc0e1fdcf22c 403 Gene3D G3DSA:1.10.630.10 6 403 3.5E-57 T 15-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 Trad_0092 9785267c7df746dfccebcc0e1fdcf22c 403 Pfam PF00067 Cytochrome P450 268 372 3.6E-10 T 15-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Trad_0092 9785267c7df746dfccebcc0e1fdcf22c 403 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 347 356 - T 15-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 Trad_0092 9785267c7df746dfccebcc0e1fdcf22c 403 PRINTS PR00359 B-class P450 signature 269 280 4.0E-9 T 15-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Trad_0092 9785267c7df746dfccebcc0e1fdcf22c 403 PRINTS PR00359 B-class P450 signature 192 214 4.0E-9 T 15-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Trad_0092 9785267c7df746dfccebcc0e1fdcf22c 403 PRINTS PR00359 B-class P450 signature 82 93 4.0E-9 T 15-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Trad_0092 9785267c7df746dfccebcc0e1fdcf22c 403 PRINTS PR00359 B-class P450 signature 345 354 4.0E-9 T 15-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Trad_0092 9785267c7df746dfccebcc0e1fdcf22c 403 PRINTS PR00359 B-class P450 signature 354 365 4.0E-9 T 15-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Trad_2429 e174c38f74c945e18fcde58a32a803b0 329 Gene3D G3DSA:1.20.1420.30 50 319 1.8E-88 T 15-10-2018 Trad_2429 e174c38f74c945e18fcde58a32a803b0 329 Gene3D G3DSA:1.20.58.1130 24 218 1.8E-88 T 15-10-2018 Trad_2429 e174c38f74c945e18fcde58a32a803b0 329 Pfam PF01699 Sodium/calcium exchanger protein 21 158 1.7E-26 T 15-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 Trad_2429 e174c38f74c945e18fcde58a32a803b0 329 Pfam PF01699 Sodium/calcium exchanger protein 187 327 1.2E-28 T 15-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 Trad_2429 e174c38f74c945e18fcde58a32a803b0 329 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 21 322 6.5E-76 T 15-10-2018 IPR004481 Sodium/potassium/calcium exchanger Reactome: R-HSA-425561 Trad_0189 e7f48d5cfc90c78946cb27bed62b1dda 224 SUPERFAMILY SSF52499 20 220 2.88E-29 T 15-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 Trad_0189 e7f48d5cfc90c78946cb27bed62b1dda 224 Gene3D G3DSA:3.40.50.850 35 219 1.5E-28 T 15-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 Trad_0189 e7f48d5cfc90c78946cb27bed62b1dda 224 Pfam PF00857 Isochorismatase family 36 203 1.2E-18 T 15-10-2018 IPR000868 Isochorismatase-like GO:0003824 Trad_1137 452b01a8876843cd60426d2115060da2 233 Pfam PF02591 C4-type zinc ribbon domain 196 228 1.2E-9 T 15-10-2018 IPR003743 C4-type zinc ribbon domain Trad_2368 55c7521df5086a18088d2028108b1fae 867 SUPERFAMILY SSF56672 463 867 4.56E-148 T 15-10-2018 Trad_2368 55c7521df5086a18088d2028108b1fae 867 SUPERFAMILY SSF53098 341 458 4.8E-17 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily Trad_2368 55c7521df5086a18088d2028108b1fae 867 Pfam PF09281 Taq polymerase, exonuclease 341 458 1.1E-29 T 15-10-2018 IPR015361 Taq polymerase, thermostable, exonuclease region GO:0001882|GO:0003887|GO:0006260|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Trad_2368 55c7521df5086a18088d2028108b1fae 867 Gene3D G3DSA:3.30.70.370 603 863 1.2E-110 T 15-10-2018 Trad_2368 55c7521df5086a18088d2028108b1fae 867 Pfam PF00476 DNA polymerase family A 491 864 4.0E-143 T 15-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Trad_2368 55c7521df5086a18088d2028108b1fae 867 PRINTS PR00868 DNA-polymerase family A (pol I) signature 814 827 4.0E-78 T 15-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Trad_2368 55c7521df5086a18088d2028108b1fae 867 PRINTS PR00868 DNA-polymerase family A (pol I) signature 641 664 4.0E-78 T 15-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Trad_2368 55c7521df5086a18088d2028108b1fae 867 PRINTS PR00868 DNA-polymerase family A (pol I) signature 786 802 4.0E-78 T 15-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Trad_2368 55c7521df5086a18088d2028108b1fae 867 PRINTS PR00868 DNA-polymerase family A (pol I) signature 596 618 4.0E-78 T 15-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Trad_2368 55c7521df5086a18088d2028108b1fae 867 PRINTS PR00868 DNA-polymerase family A (pol I) signature 671 684 4.0E-78 T 15-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Trad_2368 55c7521df5086a18088d2028108b1fae 867 PRINTS PR00868 DNA-polymerase family A (pol I) signature 732 743 4.0E-78 T 15-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Trad_2368 55c7521df5086a18088d2028108b1fae 867 PRINTS PR00868 DNA-polymerase family A (pol I) signature 695 720 4.0E-78 T 15-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Trad_2368 55c7521df5086a18088d2028108b1fae 867 PRINTS PR00868 DNA-polymerase family A (pol I) signature 754 765 4.0E-78 T 15-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Trad_2368 55c7521df5086a18088d2028108b1fae 867 PRINTS PR00868 DNA-polymerase family A (pol I) signature 619 634 4.0E-78 T 15-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Trad_2368 55c7521df5086a18088d2028108b1fae 867 ProSitePatterns PS00447 DNA polymerase family A signature. 695 714 - T 15-10-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Trad_2368 55c7521df5086a18088d2028108b1fae 867 Gene3D G3DSA:1.10.150.20 199 272 1.2E-92 T 15-10-2018 Trad_2368 55c7521df5086a18088d2028108b1fae 867 Gene3D G3DSA:3.40.50.1010 34 303 1.2E-92 T 15-10-2018 Trad_2368 55c7521df5086a18088d2028108b1fae 867 SMART SM00482 627 831 5.4E-112 T 15-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Trad_2368 55c7521df5086a18088d2028108b1fae 867 SMART SM00475 31 287 5.1E-119 T 15-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 Trad_2368 55c7521df5086a18088d2028108b1fae 867 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 197 291 2.8E-26 T 15-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 Trad_2368 55c7521df5086a18088d2028108b1fae 867 Gene3D G3DSA:1.10.150.20 650 793 1.2E-110 T 15-10-2018 Trad_2368 55c7521df5086a18088d2028108b1fae 867 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 32 195 1.8E-48 T 15-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 Trad_2368 55c7521df5086a18088d2028108b1fae 867 SUPERFAMILY SSF88723 31 195 9.81E-49 T 15-10-2018 IPR029060 PIN-like domain superfamily Trad_2368 55c7521df5086a18088d2028108b1fae 867 SMART SM00279 198 233 5.9E-11 T 15-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 Trad_2368 55c7521df5086a18088d2028108b1fae 867 TIGRFAM TIGR00593 pola: DNA polymerase I 390 867 4.0E-189 T 15-10-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Trad_2368 55c7521df5086a18088d2028108b1fae 867 SUPERFAMILY SSF47807 196 311 8.82E-30 T 15-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily Trad_2368 55c7521df5086a18088d2028108b1fae 867 Gene3D G3DSA:3.30.420.10 336 482 9.4E-32 T 15-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Trad_2368 55c7521df5086a18088d2028108b1fae 867 Gene3D G3DSA:1.20.1060.10 483 599 1.7E-38 T 15-10-2018 Trad_2228 998820702a7c9721988ee1b947c725bc 527 Gene3D G3DSA:3.40.309.10 264 467 3.7E-145 T 15-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Trad_2228 998820702a7c9721988ee1b947c725bc 527 SUPERFAMILY SSF53720 6 493 3.27E-140 T 15-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Trad_2228 998820702a7c9721988ee1b947c725bc 527 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 257 264 - T 15-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 Trad_2228 998820702a7c9721988ee1b947c725bc 527 Gene3D G3DSA:3.40.605.10 22 491 3.7E-145 T 15-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Trad_2228 998820702a7c9721988ee1b947c725bc 527 Pfam PF00171 Aldehyde dehydrogenase family 24 493 3.3E-140 T 15-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Trad_2737 9d767cb0ea189aa8fb8cedc55f8b26b1 208 Pfam PF01634 ATP phosphoribosyltransferase 55 204 8.3E-45 T 15-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 Trad_2737 9d767cb0ea189aa8fb8cedc55f8b26b1 208 Hamap MF_01018 ATP phosphoribosyltransferase [hisG]. 8 207 48.825 T 15-10-2018 IPR024893 ATP phosphoribosyltransferase HisG, short form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 Trad_2737 9d767cb0ea189aa8fb8cedc55f8b26b1 208 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 142 163 - T 15-10-2018 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 Trad_2737 9d767cb0ea189aa8fb8cedc55f8b26b1 208 SUPERFAMILY SSF53850 6 205 5.43E-59 T 15-10-2018 Trad_2737 9d767cb0ea189aa8fb8cedc55f8b26b1 208 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 9 182 2.4E-52 T 15-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 Trad_2737 9d767cb0ea189aa8fb8cedc55f8b26b1 208 Gene3D G3DSA:3.40.190.10 10 200 5.7E-65 T 15-10-2018 Trad_2737 9d767cb0ea189aa8fb8cedc55f8b26b1 208 Gene3D G3DSA:3.40.190.10 96 178 5.7E-65 T 15-10-2018 Trad_0970 ac3bf4feaba6d31e16128010a77c4dea 446 ProSitePatterns PS00180 Glutamine synthetase signature 1. 51 69 - T 15-10-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 Trad_0970 ac3bf4feaba6d31e16128010a77c4dea 446 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 7 443 3.6E-167 T 15-10-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Trad_0970 ac3bf4feaba6d31e16128010a77c4dea 446 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 16 99 1.1E-27 T 15-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 Trad_0970 ac3bf4feaba6d31e16128010a77c4dea 446 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 236 251 - T 15-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 Trad_0970 ac3bf4feaba6d31e16128010a77c4dea 446 Gene3D G3DSA:3.10.20.70 1 109 8.2E-36 T 15-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Trad_0970 ac3bf4feaba6d31e16128010a77c4dea 446 Gene3D G3DSA:3.30.590.10 110 446 7.4E-139 T 15-10-2018 Trad_0970 ac3bf4feaba6d31e16128010a77c4dea 446 Pfam PF00120 Glutamine synthetase, catalytic domain 108 442 2.8E-138 T 15-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Trad_0970 ac3bf4feaba6d31e16128010a77c4dea 446 SMART SM01230 107 356 1.5E-140 T 15-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Trad_0970 ac3bf4feaba6d31e16128010a77c4dea 446 SUPERFAMILY SSF54368 6 107 7.19E-29 T 15-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Trad_0970 ac3bf4feaba6d31e16128010a77c4dea 446 SUPERFAMILY SSF55931 107 443 2.16E-130 T 15-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Trad_0812 c704c7dcaa16f936916fa7da38d05278 984 SMART SM00958 228 352 2.3E-59 T 15-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 Trad_0812 c704c7dcaa16f936916fa7da38d05278 984 SUPERFAMILY SSF81767 227 362 9.29E-38 T 15-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 Trad_0812 c704c7dcaa16f936916fa7da38d05278 984 Pfam PF02810 SEC-C motif 958 976 1.6E-10 T 15-10-2018 IPR004027 SEC-C motif Trad_0812 c704c7dcaa16f936916fa7da38d05278 984 SUPERFAMILY SSF81886 653 966 1.24E-77 T 15-10-2018 IPR036266 SecA, Wing/Scaffold superfamily Trad_0812 c704c7dcaa16f936916fa7da38d05278 984 SUPERFAMILY SSF52540 4 409 6.06E-69 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_0812 c704c7dcaa16f936916fa7da38d05278 984 Gene3D G3DSA:3.40.50.300 411 651 9.0E-91 T 15-10-2018 Trad_0812 c704c7dcaa16f936916fa7da38d05278 984 Gene3D G3DSA:3.90.1440.10 229 362 1.9E-163 T 15-10-2018 Trad_0812 c704c7dcaa16f936916fa7da38d05278 984 Gene3D G3DSA:3.40.50.300 22 409 1.9E-163 T 15-10-2018 Trad_0812 c704c7dcaa16f936916fa7da38d05278 984 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 27 846 0.0 T 15-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Trad_0812 c704c7dcaa16f936916fa7da38d05278 984 SMART SM00957 5 396 4.7E-245 T 15-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 Trad_0812 c704c7dcaa16f936916fa7da38d05278 984 Gene3D G3DSA:1.10.3060.10 653 863 1.8E-67 T 15-10-2018 Trad_0812 c704c7dcaa16f936916fa7da38d05278 984 SUPERFAMILY SSF52540 410 650 2.25E-57 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_0812 c704c7dcaa16f936916fa7da38d05278 984 Pfam PF07517 SecA DEAD-like domain 6 396 1.8E-117 T 15-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 Trad_0812 c704c7dcaa16f936916fa7da38d05278 984 Pfam PF07516 SecA Wing and Scaffold domain 649 860 3.1E-65 T 15-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 Trad_0812 c704c7dcaa16f936916fa7da38d05278 984 Pfam PF01043 SecA preprotein cross-linking domain 233 352 3.1E-33 T 15-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 Trad_0812 c704c7dcaa16f936916fa7da38d05278 984 Hamap MF_01382 Protein translocase subunit SecA [secA]. 4 862 19.667 T 15-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Trad_0812 c704c7dcaa16f936916fa7da38d05278 984 PRINTS PR00906 SecA protein signature 407 420 9.4E-66 T 15-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Trad_0812 c704c7dcaa16f936916fa7da38d05278 984 PRINTS PR00906 SecA protein signature 370 387 9.4E-66 T 15-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Trad_0812 c704c7dcaa16f936916fa7da38d05278 984 PRINTS PR00906 SecA protein signature 114 124 9.4E-66 T 15-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Trad_0812 c704c7dcaa16f936916fa7da38d05278 984 PRINTS PR00906 SecA protein signature 98 112 9.4E-66 T 15-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Trad_0812 c704c7dcaa16f936916fa7da38d05278 984 PRINTS PR00906 SecA protein signature 333 355 9.4E-66 T 15-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Trad_0812 c704c7dcaa16f936916fa7da38d05278 984 PRINTS PR00906 SecA protein signature 167 187 9.4E-66 T 15-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Trad_0812 c704c7dcaa16f936916fa7da38d05278 984 PRINTS PR00906 SecA protein signature 60 84 9.4E-66 T 15-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Trad_0812 c704c7dcaa16f936916fa7da38d05278 984 Gene3D G3DSA:3.10.450.50 936 978 5.6E-9 T 15-10-2018 Trad_0812 c704c7dcaa16f936916fa7da38d05278 984 ProSitePatterns PS01312 SecA family signature. 494 509 - T 15-10-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 Trad_0466 d178b81e10978cd5ad823e3eed93f335 299 SUPERFAMILY SSF161098 58 284 5.1E-59 T 15-10-2018 IPR035906 MetI-like superfamily Trad_0466 d178b81e10978cd5ad823e3eed93f335 299 SUPERFAMILY SSF160964 17 49 4.71E-8 T 15-10-2018 Trad_0466 d178b81e10978cd5ad823e3eed93f335 299 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 88 286 4.8E-14 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Trad_0466 d178b81e10978cd5ad823e3eed93f335 299 Gene3D G3DSA:1.10.3720.10 54 296 1.0E-69 T 15-10-2018 IPR035906 MetI-like superfamily Trad_2899 44b56b2ca8301b2f00c367f7373be6cc 480 SUPERFAMILY SSF48452 127 227 1.48E-6 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Trad_2899 44b56b2ca8301b2f00c367f7373be6cc 480 Pfam PF13181 Tetratricopeptide repeat 280 308 0.026 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Trad_2899 44b56b2ca8301b2f00c367f7373be6cc 480 SMART SM00028 165 198 3.9 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Trad_2899 44b56b2ca8301b2f00c367f7373be6cc 480 SMART SM00028 238 271 28.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Trad_2899 44b56b2ca8301b2f00c367f7373be6cc 480 SMART SM00028 276 309 0.37 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Trad_2899 44b56b2ca8301b2f00c367f7373be6cc 480 SMART SM00028 348 381 21.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Trad_2899 44b56b2ca8301b2f00c367f7373be6cc 480 SUPERFAMILY SSF48452 206 460 5.06E-15 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Trad_2899 44b56b2ca8301b2f00c367f7373be6cc 480 Gene3D G3DSA:1.25.40.10 312 456 1.3E-8 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Trad_0916 697974c173c897fe6ecec2b43fc8006e 554 Gene3D G3DSA:3.40.50.10730 138 345 2.1E-237 T 15-10-2018 IPR038364 Urocanase, central domain superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Trad_0916 697974c173c897fe6ecec2b43fc8006e 554 SUPERFAMILY SSF111326 3 551 3.66E-245 T 15-10-2018 IPR036190 Urocanase superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Trad_0916 697974c173c897fe6ecec2b43fc8006e 554 Pfam PF17391 Urocanase N-terminal domain 8 134 3.0E-55 T 15-10-2018 IPR035400 Urocanase, N-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Trad_0916 697974c173c897fe6ecec2b43fc8006e 554 PIRSF PIRSF001423 2 553 1.6E-269 T 15-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Trad_0916 697974c173c897fe6ecec2b43fc8006e 554 Pfam PF17392 Urocanase C-terminal domain 348 542 1.5E-88 T 15-10-2018 IPR035401 Urocanase, C-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Trad_0916 697974c173c897fe6ecec2b43fc8006e 554 TIGRFAM TIGR01228 hutU: urocanate hydratase 7 549 1.2E-288 T 15-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Trad_0916 697974c173c897fe6ecec2b43fc8006e 554 Pfam PF01175 Urocanase Rossmann-like domain 137 345 8.3E-85 T 15-10-2018 IPR035085 Urocanase, Rossmann-like domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Trad_0916 697974c173c897fe6ecec2b43fc8006e 554 ProSitePatterns PS01233 Urocanase signature. 438 453 - T 15-10-2018 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Trad_0916 697974c173c897fe6ecec2b43fc8006e 554 Hamap MF_00577 Urocanate hydratase [hutU]. 2 552 48.081 T 15-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Trad_0916 697974c173c897fe6ecec2b43fc8006e 554 Gene3D G3DSA:3.40.1770.10 15 538 2.1E-237 T 15-10-2018 Trad_0081 b853ec3013bc51824ad2894899a15b98 332 SUPERFAMILY SSF143865 22 264 4.58E-50 T 15-10-2018 Trad_0081 b853ec3013bc51824ad2894899a15b98 332 Gene3D G3DSA:1.20.58.340 140 254 2.2E-21 T 15-10-2018 Trad_0081 b853ec3013bc51824ad2894899a15b98 332 Gene3D G3DSA:3.30.460.20 17 139 3.1E-22 T 15-10-2018 Trad_0081 b853ec3013bc51824ad2894899a15b98 332 TIGRFAM TIGR00383 corA: magnesium and cobalt transport protein CorA 37 331 5.3E-60 T 15-10-2018 IPR004488 Magnesium/cobalt transport protein CorA GO:0006824|GO:0015087|GO:0015095|GO:0015693|GO:0016020 Trad_0081 b853ec3013bc51824ad2894899a15b98 332 Gene3D G3DSA:1.20.58.340 255 332 7.8E-28 T 15-10-2018 Trad_0081 b853ec3013bc51824ad2894899a15b98 332 Pfam PF01544 CorA-like Mg2+ transporter protein 40 327 7.6E-66 T 15-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 Trad_0081 b853ec3013bc51824ad2894899a15b98 332 SUPERFAMILY SSF144083 267 330 6.93E-19 T 15-10-2018 Trad_2282 ec57476af8be36e22bdf4a95493f4db8 443 Pfam PF13416 Bacterial extracellular solute-binding protein 50 371 3.1E-33 T 15-10-2018 IPR006059 Bacterial extracellular solute-binding protein Trad_2282 ec57476af8be36e22bdf4a95493f4db8 443 Gene3D G3DSA:3.40.190.10 156 424 2.8E-76 T 15-10-2018 Trad_2282 ec57476af8be36e22bdf4a95493f4db8 443 SUPERFAMILY SSF53850 32 429 3.37E-58 T 15-10-2018 Trad_2282 ec57476af8be36e22bdf4a95493f4db8 443 Gene3D G3DSA:3.40.190.10 35 392 2.8E-76 T 15-10-2018 Trad_1205 2a5b669fdd10aa782c1a4f9b1ec88168 294 SUPERFAMILY SSF82153 32 166 7.98E-37 T 15-10-2018 IPR036378 FAS1 domain superfamily Trad_1205 2a5b669fdd10aa782c1a4f9b1ec88168 294 Pfam PF02469 Fasciclin domain 46 164 7.8E-30 T 15-10-2018 IPR000782 FAS1 domain Trad_1205 2a5b669fdd10aa782c1a4f9b1ec88168 294 Gene3D G3DSA:2.30.180.10 26 166 3.0E-41 T 15-10-2018 IPR036378 FAS1 domain superfamily Trad_1205 2a5b669fdd10aa782c1a4f9b1ec88168 294 SMART SM00554 71 165 8.4E-30 T 15-10-2018 IPR000782 FAS1 domain Trad_1772 a4d36fcb611c5b11f2a293f7e9f3f823 610 Pfam PF00152 tRNA synthetases class II (D, K and N) 131 569 5.4E-100 T 15-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Trad_1772 a4d36fcb611c5b11f2a293f7e9f3f823 610 SUPERFAMILY SSF55681 125 594 1.64E-102 T 15-10-2018 Trad_1772 a4d36fcb611c5b11f2a293f7e9f3f823 610 Pfam PF01336 OB-fold nucleic acid binding domain 28 110 8.0E-17 T 15-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 Trad_1772 a4d36fcb611c5b11f2a293f7e9f3f823 610 PRINTS PR01042 Aspartyl-tRNA synthetase signature 485 501 4.4E-26 T 15-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Trad_1772 a4d36fcb611c5b11f2a293f7e9f3f823 610 PRINTS PR01042 Aspartyl-tRNA synthetase signature 204 216 4.4E-26 T 15-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Trad_1772 a4d36fcb611c5b11f2a293f7e9f3f823 610 PRINTS PR01042 Aspartyl-tRNA synthetase signature 529 543 4.4E-26 T 15-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Trad_1772 a4d36fcb611c5b11f2a293f7e9f3f823 610 PRINTS PR01042 Aspartyl-tRNA synthetase signature 221 234 4.4E-26 T 15-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Trad_1772 a4d36fcb611c5b11f2a293f7e9f3f823 610 Gene3D G3DSA:3.30.930.10 130 592 2.8E-177 T 15-10-2018 Trad_1772 a4d36fcb611c5b11f2a293f7e9f3f823 610 SUPERFAMILY SSF50249 15 114 3.24E-28 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold Trad_1772 a4d36fcb611c5b11f2a293f7e9f3f823 610 SUPERFAMILY SSF55261 303 430 1.8E-30 T 15-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 Trad_1772 a4d36fcb611c5b11f2a293f7e9f3f823 610 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 2 595 32.89 T 15-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 Trad_1772 a4d36fcb611c5b11f2a293f7e9f3f823 610 Pfam PF02938 GAD domain 322 416 2.1E-21 T 15-10-2018 IPR029351 GAD domain Reactome: R-HSA-379726 Trad_1772 a4d36fcb611c5b11f2a293f7e9f3f823 610 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 15 594 1.9E-217 T 15-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 Trad_1772 a4d36fcb611c5b11f2a293f7e9f3f823 610 Gene3D G3DSA:3.30.1360.30 286 430 2.8E-177 T 15-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 Trad_1772 a4d36fcb611c5b11f2a293f7e9f3f823 610 Gene3D G3DSA:2.40.50.140 4 114 1.2E-31 T 15-10-2018 Trad_2471 eb68ad99e7fb368d0e826306f08d0468 154 Pfam PF00011 Hsp20/alpha crystallin family 36 135 4.5E-21 T 15-10-2018 IPR002068 Alpha crystallin/Hsp20 domain Trad_2471 eb68ad99e7fb368d0e826306f08d0468 154 Gene3D G3DSA:2.60.40.790 2 136 7.3E-28 T 15-10-2018 IPR008978 HSP20-like chaperone Trad_2471 eb68ad99e7fb368d0e826306f08d0468 154 SUPERFAMILY SSF49764 18 135 1.54E-29 T 15-10-2018 IPR008978 HSP20-like chaperone Trad_1566 e4d407e5efc5d0194b19b59b68ddea6b 263 Gene3D G3DSA:3.40.50.300 25 258 9.0E-66 T 15-10-2018 Trad_1566 e4d407e5efc5d0194b19b59b68ddea6b 263 SUPERFAMILY SSF52540 26 248 6.74E-66 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_1566 e4d407e5efc5d0194b19b59b68ddea6b 263 SMART SM00382 54 241 4.3E-16 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_1566 e4d407e5efc5d0194b19b59b68ddea6b 263 Pfam PF00005 ABC transporter 47 192 2.5E-29 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Trad_1566 e4d407e5efc5d0194b19b59b68ddea6b 263 ProSitePatterns PS00211 ABC transporters family signature. 165 179 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Trad_1109 953a262876dc39d34d3a72e8ca4bde77 313 SUPERFAMILY SSF53448 30 232 2.48E-32 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Trad_1109 953a262876dc39d34d3a72e8ca4bde77 313 Pfam PF13632 Glycosyl transferase family group 2 106 247 4.3E-13 T 15-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Trad_1109 953a262876dc39d34d3a72e8ca4bde77 313 Gene3D G3DSA:3.90.550.10 22 235 1.1E-25 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Trad_2825 a969ed076277fe588304de0db828321c 496 Pfam PF03471 Transporter associated domain 393 467 1.7E-20 T 15-10-2018 IPR005170 Transporter-associated domain Trad_2825 a969ed076277fe588304de0db828321c 496 Pfam PF01595 Domain of unknown function DUF21 54 238 4.6E-47 T 15-10-2018 IPR002550 CNNM, transmembrane domain Trad_2825 a969ed076277fe588304de0db828321c 496 SMART SM00116 327 375 0.25 T 15-10-2018 IPR000644 CBS domain Trad_2825 a969ed076277fe588304de0db828321c 496 SMART SM00116 262 311 1.0E-6 T 15-10-2018 IPR000644 CBS domain Trad_2825 a969ed076277fe588304de0db828321c 496 Pfam PF00571 CBS domain 253 310 1.1E-9 T 15-10-2018 IPR000644 CBS domain Trad_2825 a969ed076277fe588304de0db828321c 496 Pfam PF00571 CBS domain 321 374 8.3E-8 T 15-10-2018 IPR000644 CBS domain Trad_2825 a969ed076277fe588304de0db828321c 496 SMART SM01091 391 470 5.5E-24 T 15-10-2018 IPR005170 Transporter-associated domain Trad_2825 a969ed076277fe588304de0db828321c 496 SUPERFAMILY SSF56176 390 470 1.66E-18 T 15-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Trad_2825 a969ed076277fe588304de0db828321c 496 SUPERFAMILY SSF54631 248 387 2.91E-36 T 15-10-2018 Trad_2825 a969ed076277fe588304de0db828321c 496 Gene3D G3DSA:3.10.580.10 234 385 5.6E-54 T 15-10-2018 Trad_2825 a969ed076277fe588304de0db828321c 496 Gene3D G3DSA:3.30.465.10 386 467 2.8E-21 T 15-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 Trad_1799 276daaf4849c810a4169bebec54336d2 800 Gene3D G3DSA:3.50.30.10 375 480 1.6E-32 T 15-10-2018 Trad_1799 276daaf4849c810a4169bebec54336d2 800 SUPERFAMILY SSF56059 1 386 7.06E-98 T 15-10-2018 Trad_1799 276daaf4849c810a4169bebec54336d2 800 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 4 792 0.0 T 15-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 Trad_1799 276daaf4849c810a4169bebec54336d2 800 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 697 712 1.9E-6 T 15-10-2018 Trad_1799 276daaf4849c810a4169bebec54336d2 800 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 714 729 1.9E-6 T 15-10-2018 Trad_1799 276daaf4849c810a4169bebec54336d2 800 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 750 762 1.9E-6 T 15-10-2018 Trad_1799 276daaf4849c810a4169bebec54336d2 800 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 479 784 1.7E-57 T 15-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 Trad_1799 276daaf4849c810a4169bebec54336d2 800 PIRSF PIRSF000854 1 797 0.0 T 15-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 Trad_1799 276daaf4849c810a4169bebec54336d2 800 Gene3D G3DSA:3.20.20.60 482 789 3.4E-93 T 15-10-2018 Trad_1799 276daaf4849c810a4169bebec54336d2 800 SUPERFAMILY SSF51621 464 798 1.49E-93 T 15-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Trad_1799 276daaf4849c810a4169bebec54336d2 800 Gene3D G3DSA:3.30.1490.20 1 193 1.1E-65 T 15-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Trad_1799 276daaf4849c810a4169bebec54336d2 800 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 697 715 - T 15-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 Trad_1799 276daaf4849c810a4169bebec54336d2 800 Pfam PF00391 PEP-utilising enzyme, mobile domain 387 458 1.2E-21 T 15-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 Trad_1799 276daaf4849c810a4169bebec54336d2 800 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 16 344 2.4E-106 T 15-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 Trad_1799 276daaf4849c810a4169bebec54336d2 800 SUPERFAMILY SSF52009 349 468 1.96E-30 T 15-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 Trad_1799 276daaf4849c810a4169bebec54336d2 800 Gene3D G3DSA:3.30.470.20 194 359 3.1E-49 T 15-10-2018 Trad_0310 acb20d1f1e86711c866334805c4bec46 546 SUPERFAMILY SSF90123 5 316 2.09E-47 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Trad_0310 acb20d1f1e86711c866334805c4bec46 546 Pfam PF00005 ABC transporter 345 491 1.9E-27 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Trad_0310 acb20d1f1e86711c866334805c4bec46 546 SMART SM00382 354 536 1.5E-15 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_0310 acb20d1f1e86711c866334805c4bec46 546 Gene3D G3DSA:1.20.1560.10 2 314 9.9E-50 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Trad_0310 acb20d1f1e86711c866334805c4bec46 546 ProSitePatterns PS00211 ABC transporters family signature. 463 477 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Trad_0310 acb20d1f1e86711c866334805c4bec46 546 SUPERFAMILY SSF52540 330 539 1.38E-54 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_0310 acb20d1f1e86711c866334805c4bec46 546 Pfam PF00664 ABC transporter transmembrane region 16 283 1.2E-29 T 15-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Trad_0310 acb20d1f1e86711c866334805c4bec46 546 Gene3D G3DSA:3.40.50.300 320 545 6.9E-64 T 15-10-2018 Trad_2252 cec2b42d3c1ed36ea0a973401ae23b36 294 SUPERFAMILY SSF81321 16 246 1.68E-33 T 15-10-2018 Trad_2252 cec2b42d3c1ed36ea0a973401ae23b36 294 SMART SM01021 18 258 9.1E-17 T 15-10-2018 IPR001425 Archaeal/bacterial/fungal rhodopsins GO:0005216|GO:0006811|GO:0016020 Trad_2252 cec2b42d3c1ed36ea0a973401ae23b36 294 PRINTS PR00251 Bacterial opsin signature 20 39 3.0E-9 T 15-10-2018 IPR001425 Archaeal/bacterial/fungal rhodopsins GO:0005216|GO:0006811|GO:0016020 Trad_2252 cec2b42d3c1ed36ea0a973401ae23b36 294 PRINTS PR00251 Bacterial opsin signature 93 114 3.0E-9 T 15-10-2018 IPR001425 Archaeal/bacterial/fungal rhodopsins GO:0005216|GO:0006811|GO:0016020 Trad_2252 cec2b42d3c1ed36ea0a973401ae23b36 294 PRINTS PR00251 Bacterial opsin signature 152 173 3.0E-9 T 15-10-2018 IPR001425 Archaeal/bacterial/fungal rhodopsins GO:0005216|GO:0006811|GO:0016020 Trad_2252 cec2b42d3c1ed36ea0a973401ae23b36 294 PRINTS PR00251 Bacterial opsin signature 225 243 3.0E-9 T 15-10-2018 IPR001425 Archaeal/bacterial/fungal rhodopsins GO:0005216|GO:0006811|GO:0016020 Trad_2252 cec2b42d3c1ed36ea0a973401ae23b36 294 Gene3D G3DSA:1.20.1070.10 1 271 1.6E-92 T 15-10-2018 Trad_2252 cec2b42d3c1ed36ea0a973401ae23b36 294 Pfam PF01036 Bacteriorhodopsin-like protein 22 251 3.7E-13 T 15-10-2018 IPR001425 Archaeal/bacterial/fungal rhodopsins GO:0005216|GO:0006811|GO:0016020 Trad_2288 699936b8ce9042f9a2f00c8c084daf4b 326 SUPERFAMILY SSF161098 90 308 5.63E-16 T 15-10-2018 IPR035906 MetI-like superfamily Trad_2288 699936b8ce9042f9a2f00c8c084daf4b 326 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 326 1.3E-30 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Trad_2288 699936b8ce9042f9a2f00c8c084daf4b 326 Gene3D G3DSA:1.10.3720.10 85 318 3.1E-17 T 15-10-2018 IPR035906 MetI-like superfamily Trad_1982 f7a96f7824c83ab7cd7a3830396fe300 671 Pfam PF01966 HD domain 483 604 1.8E-20 T 15-10-2018 IPR006674 HD domain Trad_1982 f7a96f7824c83ab7cd7a3830396fe300 671 SMART SM00065 313 461 2.7E-6 T 15-10-2018 IPR003018 GAF domain GO:0005515 Trad_1982 f7a96f7824c83ab7cd7a3830396fe300 671 Gene3D G3DSA:1.10.3210.10 463 645 1.4E-68 T 15-10-2018 Trad_1982 f7a96f7824c83ab7cd7a3830396fe300 671 Pfam PF00990 Diguanylate cyclase, GGDEF domain 145 286 3.5E-23 T 15-10-2018 IPR000160 GGDEF domain Trad_1982 f7a96f7824c83ab7cd7a3830396fe300 671 SMART SM00267 134 291 1.7E-31 T 15-10-2018 IPR000160 GGDEF domain Trad_1982 f7a96f7824c83ab7cd7a3830396fe300 671 Gene3D G3DSA:3.30.450.40 295 462 5.1E-18 T 15-10-2018 IPR029016 GAF-like domain superfamily Trad_1982 f7a96f7824c83ab7cd7a3830396fe300 671 SUPERFAMILY SSF55073 150 285 1.73E-24 T 15-10-2018 IPR029787 Nucleotide cyclase Trad_1982 f7a96f7824c83ab7cd7a3830396fe300 671 Gene3D G3DSA:3.30.70.270 131 291 4.5E-31 T 15-10-2018 Trad_1982 f7a96f7824c83ab7cd7a3830396fe300 671 TIGRFAM TIGR00277 HDIG: HDIG domain 483 573 1.1E-7 T 15-10-2018 IPR006675 HDIG domain Trad_1982 f7a96f7824c83ab7cd7a3830396fe300 671 SUPERFAMILY SSF109604 473 643 3.71E-39 T 15-10-2018 Trad_1982 f7a96f7824c83ab7cd7a3830396fe300 671 SMART SM00471 478 614 1.0E-10 T 15-10-2018 IPR003607 HD/PDEase domain Trad_1982 f7a96f7824c83ab7cd7a3830396fe300 671 Pfam PF13185 GAF domain 314 452 1.9E-9 T 15-10-2018 IPR003018 GAF domain GO:0005515 Trad_1982 f7a96f7824c83ab7cd7a3830396fe300 671 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 144 284 5.2E-18 T 15-10-2018 IPR000160 GGDEF domain Trad_1982 f7a96f7824c83ab7cd7a3830396fe300 671 SUPERFAMILY SSF55781 315 461 6.11E-15 T 15-10-2018 Trad_2053 6c0879075c6a712fa708b16a9d124618 312 Gene3D G3DSA:3.10.290.10 1 63 3.1E-10 T 15-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Trad_2053 6c0879075c6a712fa708b16a9d124618 312 Pfam PF00849 RNA pseudouridylate synthase 86 244 1.6E-34 T 15-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 Trad_2053 6c0879075c6a712fa708b16a9d124618 312 SUPERFAMILY SSF55120 71 298 4.73E-66 T 15-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Trad_2053 6c0879075c6a712fa708b16a9d124618 312 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 136 150 - T 15-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Trad_2053 6c0879075c6a712fa708b16a9d124618 312 Gene3D G3DSA:3.30.2350.10 68 290 7.5E-69 T 15-10-2018 Trad_2053 6c0879075c6a712fa708b16a9d124618 312 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 10 296 7.1E-76 T 15-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 Trad_2053 6c0879075c6a712fa708b16a9d124618 312 Pfam PF01479 S4 domain 12 54 7.2E-5 T 15-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Trad_2053 6c0879075c6a712fa708b16a9d124618 312 SUPERFAMILY SSF55174 12 64 4.37E-8 T 15-10-2018 Trad_2053 6c0879075c6a712fa708b16a9d124618 312 SMART SM00363 12 76 5.0E-8 T 15-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Trad_1893 8b79b6a0071d8bbe9c9609fcaffaaa2f 301 SMART SM01130 3 294 2.8E-120 T 15-10-2018 IPR002220 DapA-like GO:0016829 Trad_1893 8b79b6a0071d8bbe9c9609fcaffaaa2f 301 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 7 292 7.9E-87 T 15-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Trad_1893 8b79b6a0071d8bbe9c9609fcaffaaa2f 301 PIRSF PIRSF001365 1 300 1.9E-82 T 15-10-2018 IPR002220 DapA-like GO:0016829 Trad_1893 8b79b6a0071d8bbe9c9609fcaffaaa2f 301 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 137 168 - T 15-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 Trad_1893 8b79b6a0071d8bbe9c9609fcaffaaa2f 301 PRINTS PR00146 Dihydrodipicolinate synthase signature 74 92 1.4E-24 T 15-10-2018 IPR002220 DapA-like GO:0016829 Trad_1893 8b79b6a0071d8bbe9c9609fcaffaaa2f 301 PRINTS PR00146 Dihydrodipicolinate synthase signature 106 122 1.4E-24 T 15-10-2018 IPR002220 DapA-like GO:0016829 Trad_1893 8b79b6a0071d8bbe9c9609fcaffaaa2f 301 PRINTS PR00146 Dihydrodipicolinate synthase signature 38 59 1.4E-24 T 15-10-2018 IPR002220 DapA-like GO:0016829 Trad_1893 8b79b6a0071d8bbe9c9609fcaffaaa2f 301 PRINTS PR00146 Dihydrodipicolinate synthase signature 132 149 1.4E-24 T 15-10-2018 IPR002220 DapA-like GO:0016829 Trad_1893 8b79b6a0071d8bbe9c9609fcaffaaa2f 301 Pfam PF00701 Dihydrodipicolinate synthetase family 5 291 5.3E-82 T 15-10-2018 IPR002220 DapA-like GO:0016829 Trad_1893 8b79b6a0071d8bbe9c9609fcaffaaa2f 301 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 3 292 53.48 T 15-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Trad_1893 8b79b6a0071d8bbe9c9609fcaffaaa2f 301 SUPERFAMILY SSF51569 3 296 3.56E-91 T 15-10-2018 Trad_1893 8b79b6a0071d8bbe9c9609fcaffaaa2f 301 Gene3D G3DSA:3.20.20.70 5 297 9.3E-100 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Trad_2038 3be17ce8ef6cfa0786e58f41e5e90fdf 374 SUPERFAMILY SSF51445 17 360 4.22E-88 T 15-10-2018 IPR017853 Glycoside hydrolase superfamily Trad_2038 3be17ce8ef6cfa0786e58f41e5e90fdf 374 Gene3D G3DSA:3.20.20.80 11 363 1.8E-132 T 15-10-2018 Trad_2038 3be17ce8ef6cfa0786e58f41e5e90fdf 374 Pfam PF07745 Glycosyl hydrolase family 53 18 360 4.6E-118 T 15-10-2018 IPR011683 Glycosyl hydrolase family 53 GO:0015926 Trad_1323 70c3399d8bd86ac1ed38298b74336059 253 SMART SM00382 30 212 8.6E-16 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_1323 70c3399d8bd86ac1ed38298b74336059 253 Pfam PF00005 ABC transporter 22 164 2.1E-25 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Trad_1323 70c3399d8bd86ac1ed38298b74336059 253 SUPERFAMILY SSF52540 5 224 1.81E-56 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_1323 70c3399d8bd86ac1ed38298b74336059 253 Gene3D G3DSA:3.40.50.300 1 240 2.0E-61 T 15-10-2018 Trad_0161 3e70f2a8fdfb82db14f5df5164810b76 490 SUPERFAMILY SSF51445 18 372 8.45E-95 T 15-10-2018 IPR017853 Glycoside hydrolase superfamily Trad_0161 3e70f2a8fdfb82db14f5df5164810b76 490 SMART SM00813 295 480 1.6E-58 T 15-10-2018 IPR010720 Alpha-L-arabinofuranosidase, C-terminal GO:0046373|GO:0046556 KEGG: 00520+3.2.1.55 Trad_0161 3e70f2a8fdfb82db14f5df5164810b76 490 SUPERFAMILY SSF51011 355 485 3.96E-24 T 15-10-2018 Trad_0161 3e70f2a8fdfb82db14f5df5164810b76 490 Gene3D G3DSA:2.60.40.1180 14 481 1.7E-172 T 15-10-2018 IPR013780 Glycosyl hydrolase, all-beta Trad_0161 3e70f2a8fdfb82db14f5df5164810b76 490 Pfam PF06964 Alpha-L-arabinofuranosidase C-terminal domain 295 480 8.7E-36 T 15-10-2018 IPR010720 Alpha-L-arabinofuranosidase, C-terminal GO:0046373|GO:0046556 KEGG: 00520+3.2.1.55 Trad_0161 3e70f2a8fdfb82db14f5df5164810b76 490 Gene3D G3DSA:3.20.20.80 17 373 1.7E-172 T 15-10-2018 Trad_2755 1e4c61a5f22aff35bd17f12a9fd7045a 99 SUPERFAMILY SSF47729 8 96 1.62E-30 T 15-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Trad_2755 1e4c61a5f22aff35bd17f12a9fd7045a 99 SMART SM00411 7 96 4.4E-39 T 15-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Trad_2755 1e4c61a5f22aff35bd17f12a9fd7045a 99 PRINTS PR01727 Prokaryotic integration host factor signature 80 94 9.3E-16 T 15-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Trad_2755 1e4c61a5f22aff35bd17f12a9fd7045a 99 PRINTS PR01727 Prokaryotic integration host factor signature 46 61 9.3E-16 T 15-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Trad_2755 1e4c61a5f22aff35bd17f12a9fd7045a 99 PRINTS PR01727 Prokaryotic integration host factor signature 64 77 9.3E-16 T 15-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Trad_2755 1e4c61a5f22aff35bd17f12a9fd7045a 99 Pfam PF00216 Bacterial DNA-binding protein 8 95 4.2E-33 T 15-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Trad_2755 1e4c61a5f22aff35bd17f12a9fd7045a 99 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 52 71 - T 15-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 Trad_2755 1e4c61a5f22aff35bd17f12a9fd7045a 99 Gene3D G3DSA:4.10.520.10 2 96 5.7E-36 T 15-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Trad_1474 4a352f4e4d1f2fabba3a941bd084a24b 306 Gene3D G3DSA:3.30.420.40 6 290 4.4E-96 T 15-10-2018 Trad_1474 4a352f4e4d1f2fabba3a941bd084a24b 306 Gene3D G3DSA:3.30.420.40 125 277 4.4E-96 T 15-10-2018 Trad_1474 4a352f4e4d1f2fabba3a941bd084a24b 306 SUPERFAMILY SSF53067 4 298 2.05E-63 T 15-10-2018 Trad_1474 4a352f4e4d1f2fabba3a941bd084a24b 306 Pfam PF00480 ROK family 6 295 3.6E-76 T 15-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 Trad_1474 4a352f4e4d1f2fabba3a941bd084a24b 306 ProSitePatterns PS01125 ROK family signature. 133 160 - T 15-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 Trad_1190 d7186bfeb0518b65973e6f73c507196c 455 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 224 371 2.3E-21 T 15-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Trad_1190 d7186bfeb0518b65973e6f73c507196c 455 Pfam PF01926 50S ribosome-binding GTPase 226 327 5.4E-20 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 Trad_1190 d7186bfeb0518b65973e6f73c507196c 455 Pfam PF10396 GTP-binding protein TrmE N-terminus 9 130 1.6E-38 T 15-10-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 Trad_1190 d7186bfeb0518b65973e6f73c507196c 455 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 8 455 30.644 T 15-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 Trad_1190 d7186bfeb0518b65973e6f73c507196c 455 Pfam PF12631 MnmE helical domain 133 452 6.8E-37 T 15-10-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 Trad_1190 d7186bfeb0518b65973e6f73c507196c 455 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 14 455 2.8E-89 T 15-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 Trad_1190 d7186bfeb0518b65973e6f73c507196c 455 Gene3D G3DSA:3.30.1360.120 5 130 4.9E-45 T 15-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 Trad_1190 d7186bfeb0518b65973e6f73c507196c 455 Gene3D G3DSA:1.20.120.430 131 455 1.6E-86 T 15-10-2018 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 Trad_1190 d7186bfeb0518b65973e6f73c507196c 455 Gene3D G3DSA:3.40.50.300 224 387 1.6E-86 T 15-10-2018 Trad_1190 d7186bfeb0518b65973e6f73c507196c 455 SUPERFAMILY SSF52540 82 378 3.88E-38 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_2793 9313d346c4efccdf121ad06e1eb9b5ed 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 9.6E-15 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2793 9313d346c4efccdf121ad06e1eb9b5ed 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 9.6E-15 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2793 9313d346c4efccdf121ad06e1eb9b5ed 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 9.6E-15 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2793 9313d346c4efccdf121ad06e1eb9b5ed 249 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 9 247 8.8E-95 T 15-10-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Trad_2793 9313d346c4efccdf121ad06e1eb9b5ed 249 Gene3D G3DSA:3.40.50.720 3 248 7.8E-85 T 15-10-2018 Trad_2793 9313d346c4efccdf121ad06e1eb9b5ed 249 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 246 9.2E-67 T 15-10-2018 Trad_2793 9313d346c4efccdf121ad06e1eb9b5ed 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 2.9E-49 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2793 9313d346c4efccdf121ad06e1eb9b5ed 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 2.9E-49 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2793 9313d346c4efccdf121ad06e1eb9b5ed 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 2.9E-49 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2793 9313d346c4efccdf121ad06e1eb9b5ed 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 2.9E-49 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2793 9313d346c4efccdf121ad06e1eb9b5ed 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 2.9E-49 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2793 9313d346c4efccdf121ad06e1eb9b5ed 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 210 230 2.9E-49 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2793 9313d346c4efccdf121ad06e1eb9b5ed 249 SUPERFAMILY SSF51735 7 248 2.44E-85 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_2793 9313d346c4efccdf121ad06e1eb9b5ed 249 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 187 2.4E-5 T 15-10-2018 Trad_0675 6b3d78fcafb374467a1e0ee33128f8c9 352 Gene3D G3DSA:3.40.50.10490 198 351 6.1E-36 T 15-10-2018 Trad_0675 6b3d78fcafb374467a1e0ee33128f8c9 352 Pfam PF01380 SIS domain 206 326 2.6E-15 T 15-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 Trad_0675 6b3d78fcafb374467a1e0ee33128f8c9 352 Pfam PF01380 SIS domain 94 169 7.1E-11 T 15-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 Trad_0675 6b3d78fcafb374467a1e0ee33128f8c9 352 SUPERFAMILY SSF53697 8 350 8.9E-66 T 15-10-2018 Trad_0675 6b3d78fcafb374467a1e0ee33128f8c9 352 Gene3D G3DSA:3.40.50.10490 3 194 2.3E-44 T 15-10-2018 Trad_0470 67678e9502bd9063f0016bf24de917ae 354 SUPERFAMILY SSF55347 139 308 9.65E-25 T 15-10-2018 Trad_0470 67678e9502bd9063f0016bf24de917ae 354 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 14 133 1.1E-26 T 15-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 Trad_0470 67678e9502bd9063f0016bf24de917ae 354 Gene3D G3DSA:3.30.360.10 139 333 8.3E-81 T 15-10-2018 Trad_0470 67678e9502bd9063f0016bf24de917ae 354 Gene3D G3DSA:3.40.50.720 16 314 8.3E-81 T 15-10-2018 Trad_0470 67678e9502bd9063f0016bf24de917ae 354 SUPERFAMILY SSF51735 8 161 6.76E-49 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_2989 e7ebc6f0d5e2561744abd32c5b6343d5 160 Gene3D G3DSA:1.10.10.10 13 85 1.6E-18 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Trad_2989 e7ebc6f0d5e2561744abd32c5b6343d5 160 Gene3D G3DSA:3.30.1490.190 89 151 3.5E-14 T 15-10-2018 Trad_2989 e7ebc6f0d5e2561744abd32c5b6343d5 160 Pfam PF01475 Ferric uptake regulator family 15 111 1.5E-24 T 15-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 Trad_2989 e7ebc6f0d5e2561744abd32c5b6343d5 160 SUPERFAMILY SSF46785 10 143 3.73E-28 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Trad_2122 ccdc6e2b7a3ab328689edf940fbe9ec5 214 Pfam PF11009 Protein of unknown function (DUF2847) 8 105 3.5E-25 T 15-10-2018 IPR022551 Protein of unknown function DUF2847 Trad_2122 ccdc6e2b7a3ab328689edf940fbe9ec5 214 Gene3D G3DSA:3.40.30.10 1 109 5.5E-17 T 15-10-2018 Trad_1204 140ad64f0792f738a95bebeaecb34d84 413 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 11 399 4.5E-86 T 15-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 Trad_1204 140ad64f0792f738a95bebeaecb34d84 413 SUPERFAMILY SSF53187 3 403 3.93E-66 T 15-10-2018 Trad_1204 140ad64f0792f738a95bebeaecb34d84 413 Gene3D G3DSA:3.30.70.360 211 323 3.6E-111 T 15-10-2018 Trad_1204 140ad64f0792f738a95bebeaecb34d84 413 Gene3D G3DSA:3.40.630.10 22 400 3.6E-111 T 15-10-2018 Trad_1204 140ad64f0792f738a95bebeaecb34d84 413 PIRSF PIRSF001235 2 409 2.8E-100 T 15-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 Trad_1204 140ad64f0792f738a95bebeaecb34d84 413 Pfam PF01546 Peptidase family M20/M25/M40 73 403 1.4E-27 T 15-10-2018 IPR002933 Peptidase M20 GO:0016787 Trad_1204 140ad64f0792f738a95bebeaecb34d84 413 SUPERFAMILY SSF55031 211 325 9.24E-21 T 15-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain Trad_1385 4575e2dea9967c2077c58cf95aaba777 326 SMART SM00478 41 187 1.2E-47 T 15-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 Trad_1385 4575e2dea9967c2077c58cf95aaba777 326 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 9 263 6.2E-92 T 15-10-2018 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 Trad_1385 4575e2dea9967c2077c58cf95aaba777 326 Pfam PF14815 NUDIX domain 232 319 8.0E-16 T 15-10-2018 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 Trad_1385 4575e2dea9967c2077c58cf95aaba777 326 Gene3D G3DSA:1.10.1670.10 12 210 3.4E-80 T 15-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 Trad_1385 4575e2dea9967c2077c58cf95aaba777 326 Pfam PF00633 Helix-hairpin-helix motif 103 128 4.9E-6 T 15-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 Trad_1385 4575e2dea9967c2077c58cf95aaba777 326 ProSitePatterns PS01155 Endonuclease III family signature. 103 132 - T 15-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 Trad_1385 4575e2dea9967c2077c58cf95aaba777 326 SMART SM00525 188 208 1.4E-4 T 15-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 Trad_1385 4575e2dea9967c2077c58cf95aaba777 326 Gene3D G3DSA:3.90.79.10 230 324 4.1E-6 T 15-10-2018 Trad_1385 4575e2dea9967c2077c58cf95aaba777 326 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 37 166 3.1E-19 T 15-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 Trad_1385 4575e2dea9967c2077c58cf95aaba777 326 SUPERFAMILY SSF55811 217 323 4.06E-17 T 15-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Trad_1385 4575e2dea9967c2077c58cf95aaba777 326 SUPERFAMILY SSF48150 11 219 3.77E-73 T 15-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 Trad_1385 4575e2dea9967c2077c58cf95aaba777 326 Gene3D G3DSA:1.10.340.30 23 133 3.4E-80 T 15-10-2018 Trad_2532 d9578c2078d74e54dff5c4297d472eba 223 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 81 192 4.2E-9 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Trad_2532 d9578c2078d74e54dff5c4297d472eba 223 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 83 184 6.6E-11 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Trad_2532 d9578c2078d74e54dff5c4297d472eba 223 Gene3D G3DSA:1.20.120.1600 16 89 2.4E-37 T 15-10-2018 Trad_2532 d9578c2078d74e54dff5c4297d472eba 223 SUPERFAMILY SSF56784 3 212 6.24E-37 T 15-10-2018 IPR036412 HAD-like superfamily Trad_2532 d9578c2078d74e54dff5c4297d472eba 223 Gene3D G3DSA:3.40.50.1000 3 197 2.4E-37 T 15-10-2018 IPR023214 HAD superfamily Trad_2532 d9578c2078d74e54dff5c4297d472eba 223 Pfam PF13419 Haloacid dehalogenase-like hydrolase 5 193 9.3E-22 T 15-10-2018 Trad_2054 df90d7b384529b8abf2579c7babba3dd 866 Pfam PF13439 Glycosyltransferase Family 4 116 268 8.8E-11 T 15-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Trad_2054 df90d7b384529b8abf2579c7babba3dd 866 SUPERFAMILY SSF48208 670 820 6.63E-9 T 15-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 Trad_2054 df90d7b384529b8abf2579c7babba3dd 866 Gene3D G3DSA:3.40.50.2000 268 457 4.9E-40 T 15-10-2018 Trad_2054 df90d7b384529b8abf2579c7babba3dd 866 SUPERFAMILY SSF53756 103 473 3.68E-47 T 15-10-2018 Trad_2054 df90d7b384529b8abf2579c7babba3dd 866 Gene3D G3DSA:3.40.50.2000 110 473 4.9E-40 T 15-10-2018 Trad_2054 df90d7b384529b8abf2579c7babba3dd 866 Pfam PF00534 Glycosyl transferases group 1 286 454 4.0E-17 T 15-10-2018 IPR001296 Glycosyl transferase, family 1 Trad_0554 e186dce669935b3e34bcfd3b7f14648b 163 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 5 156 2.3E-49 T 15-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Trad_0554 e186dce669935b3e34bcfd3b7f14648b 163 Gene3D G3DSA:3.40.50.620 3 160 2.5E-47 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Trad_0554 e186dce669935b3e34bcfd3b7f14648b 163 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 5 65 4.2E-13 T 15-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 Trad_0554 e186dce669935b3e34bcfd3b7f14648b 163 Pfam PF01467 Cytidylyltransferase-like 6 133 1.7E-15 T 15-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 Trad_0554 e186dce669935b3e34bcfd3b7f14648b 163 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 3 160 30.76 T 15-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Trad_0554 e186dce669935b3e34bcfd3b7f14648b 163 SUPERFAMILY SSF52374 5 156 1.05E-36 T 15-10-2018 Trad_0554 e186dce669935b3e34bcfd3b7f14648b 163 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 51 75 2.4E-33 T 15-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Trad_0554 e186dce669935b3e34bcfd3b7f14648b 163 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 114 136 2.4E-33 T 15-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Trad_0554 e186dce669935b3e34bcfd3b7f14648b 163 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 87 103 2.4E-33 T 15-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Trad_0554 e186dce669935b3e34bcfd3b7f14648b 163 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 3 21 2.4E-33 T 15-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Trad_0462 a64f93d28f42673623798c098b5979e0 329 SUPERFAMILY SSF53300 111 288 5.79E-27 T 15-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Trad_0462 a64f93d28f42673623798c098b5979e0 329 Gene3D G3DSA:3.40.50.410 105 291 1.6E-33 T 15-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Trad_0462 a64f93d28f42673623798c098b5979e0 329 Pfam PF00092 von Willebrand factor type A domain 115 282 2.2E-16 T 15-10-2018 IPR002035 von Willebrand factor, type A Trad_0462 a64f93d28f42673623798c098b5979e0 329 SMART SM00327 108 289 6.6E-16 T 15-10-2018 IPR002035 von Willebrand factor, type A Trad_2577 22e552d6bc344c7b444a9c2cdee970b6 258 Gene3D G3DSA:3.20.20.60 1 256 1.8E-83 T 15-10-2018 Trad_2577 22e552d6bc344c7b444a9c2cdee970b6 258 SUPERFAMILY SSF51621 3 250 6.6E-71 T 15-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Trad_2577 22e552d6bc344c7b444a9c2cdee970b6 258 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 19 238 5.0E-39 T 15-10-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 Trad_1450 2a0c2a0f0e79d348be24b5f0b9c87be7 263 TIGRFAM TIGR02580 cas_RAMP_Cmr4: CRISPR type III-B/RAMP module RAMP protein Cmr4 6 254 3.4E-51 T 15-10-2018 IPR013410 CRISPR-associated RAMP Cmr4 Trad_1450 2a0c2a0f0e79d348be24b5f0b9c87be7 263 Pfam PF03787 RAMP superfamily 10 256 1.3E-21 T 15-10-2018 IPR005537 CRISPR type III-associated RAMP protein Trad_0385 4f0c5e16359cf24b9817d0285eeaaa35 173 ProSitePatterns PS00855 Signal peptidases II signature. 95 107 - T 15-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Trad_0385 4f0c5e16359cf24b9817d0285eeaaa35 173 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 128 144 9.0E-17 T 15-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Trad_0385 4f0c5e16359cf24b9817d0285eeaaa35 173 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 44 52 9.0E-17 T 15-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Trad_0385 4f0c5e16359cf24b9817d0285eeaaa35 173 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 92 107 9.0E-17 T 15-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Trad_0385 4f0c5e16359cf24b9817d0285eeaaa35 173 TIGRFAM TIGR00077 lspA: signal peptidase II 2 150 1.8E-37 T 15-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Trad_0385 4f0c5e16359cf24b9817d0285eeaaa35 173 Pfam PF01252 Signal peptidase (SPase) II 6 147 2.0E-36 T 15-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Trad_0385 4f0c5e16359cf24b9817d0285eeaaa35 173 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 1 153 15.295 T 15-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Trad_1437 62f15358e1f4b9ec891a4d906ed441bc 380 Gene3D G3DSA:2.70.70.10 223 378 2.0E-43 T 15-10-2018 IPR011055 Duplicated hybrid motif Trad_1437 62f15358e1f4b9ec891a4d906ed441bc 380 Pfam PF01551 Peptidase family M23 277 371 2.1E-28 T 15-10-2018 IPR016047 Peptidase M23 Trad_1437 62f15358e1f4b9ec891a4d906ed441bc 380 SUPERFAMILY SSF51261 247 374 7.32E-48 T 15-10-2018 IPR011055 Duplicated hybrid motif Trad_0005 8bdcb58b14f6da1ac83666b83f0ab94f 149 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 15-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_0005 8bdcb58b14f6da1ac83666b83f0ab94f 149 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 147 5.8E-42 T 15-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 Trad_0005 8bdcb58b14f6da1ac83666b83f0ab94f 149 SUPERFAMILY SSF55653 57 145 6.54E-24 T 15-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily Trad_0005 8bdcb58b14f6da1ac83666b83f0ab94f 149 Gene3D G3DSA:3.40.5.10 1 59 1.9E-23 T 15-10-2018 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_0005 8bdcb58b14f6da1ac83666b83f0ab94f 149 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 147 25.122 T 15-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 Trad_0005 8bdcb58b14f6da1ac83666b83f0ab94f 149 Pfam PF03948 Ribosomal protein L9, C-terminal domain 63 146 2.5E-24 T 15-10-2018 IPR020069 Ribosomal protein L9, C-terminal Trad_0005 8bdcb58b14f6da1ac83666b83f0ab94f 149 SUPERFAMILY SSF55658 1 56 5.58E-17 T 15-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal Trad_0005 8bdcb58b14f6da1ac83666b83f0ab94f 149 Gene3D G3DSA:3.10.430.100 60 148 5.3E-30 T 15-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily Trad_0005 8bdcb58b14f6da1ac83666b83f0ab94f 149 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 46 3.1E-21 T 15-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_1987 0b7e4b5240758aaefb113c970b5a59c6 297 SUPERFAMILY SSF110581 3 290 3.66E-86 T 15-10-2018 IPR022830 Indigoidine synthase A-like GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 Trad_1987 0b7e4b5240758aaefb113c970b5a59c6 297 Hamap MF_01876 Pseudouridine-5'-phosphate glycosidase [psuG]. 5 291 36.457 T 15-10-2018 IPR007342 Pseudouridine-5'-phosphate glycosidase GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 Trad_1987 0b7e4b5240758aaefb113c970b5a59c6 297 Pfam PF04227 Indigoidine synthase A like protein 7 287 1.0E-96 T 15-10-2018 IPR007342 Pseudouridine-5'-phosphate glycosidase GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 Trad_1987 0b7e4b5240758aaefb113c970b5a59c6 297 Gene3D G3DSA:3.40.1790.10 1 292 9.3E-97 T 15-10-2018 IPR022830 Indigoidine synthase A-like GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 Trad_0614 83b5c061f6a14dffb5810125f9c9c803 641 ProSitePatterns PS00455 Putative AMP-binding domain signature. 260 271 - T 15-10-2018 IPR020845 AMP-binding, conserved site Trad_0614 83b5c061f6a14dffb5810125f9c9c803 641 SUPERFAMILY SSF56801 32 634 1.03E-126 T 15-10-2018 Trad_0614 83b5c061f6a14dffb5810125f9c9c803 641 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 35 89 4.7E-10 T 15-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 Trad_0614 83b5c061f6a14dffb5810125f9c9c803 641 Gene3D G3DSA:3.30.300.30 515 637 3.0E-15 T 15-10-2018 Trad_0614 83b5c061f6a14dffb5810125f9c9c803 641 Pfam PF13193 AMP-binding enzyme C-terminal domain 531 603 6.5E-10 T 15-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Trad_0614 83b5c061f6a14dffb5810125f9c9c803 641 TIGRFAM TIGR01217 ac_ac_CoA_syn: acetoacetate-CoA ligase 3 631 2.7E-230 T 15-10-2018 IPR005914 Acetoacetyl-CoA synthase GO:0006629|GO:0030729 KEGG: 00280+6.2.1.16|KEGG: 00650+6.2.1.16|Reactome: R-HSA-77111 Trad_0614 83b5c061f6a14dffb5810125f9c9c803 641 Pfam PF00501 AMP-binding enzyme 99 515 3.1E-53 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Trad_0614 83b5c061f6a14dffb5810125f9c9c803 641 Gene3D G3DSA:3.40.50.12780 69 511 7.2E-66 T 15-10-2018 Trad_1292 5a2e3fa34b7ca4646e27caf66a3cef3d 537 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 78 458 4.5E-96 T 15-10-2018 IPR000914 Solute-binding protein family 5 domain Trad_1292 5a2e3fa34b7ca4646e27caf66a3cef3d 537 Gene3D G3DSA:3.40.190.10 217 524 6.3E-145 T 15-10-2018 Trad_1292 5a2e3fa34b7ca4646e27caf66a3cef3d 537 Gene3D G3DSA:3.90.76.10 52 216 6.3E-145 T 15-10-2018 Trad_1292 5a2e3fa34b7ca4646e27caf66a3cef3d 537 SUPERFAMILY SSF53850 36 535 4.89E-135 T 15-10-2018 Trad_1292 5a2e3fa34b7ca4646e27caf66a3cef3d 537 PIRSF PIRSF002741 32 537 1.3E-103 T 15-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Trad_1292 5a2e3fa34b7ca4646e27caf66a3cef3d 537 Gene3D G3DSA:3.10.105.10 297 512 6.3E-145 T 15-10-2018 Trad_1348 61c75340432b698ad436e23d1f2089df 146 Pfam PF17384 RimP C-terminal SH3 domain 83 135 2.1E-8 T 15-10-2018 IPR028998 Ribosome maturation factor RimP, C-terminal Trad_1348 61c75340432b698ad436e23d1f2089df 146 Pfam PF02576 RimP N-terminal domain 8 78 2.9E-14 T 15-10-2018 IPR028989 Ribosome maturation factor RimP, N-terminal Trad_1348 61c75340432b698ad436e23d1f2089df 146 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 1 143 15.782 T 15-10-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 Trad_1348 61c75340432b698ad436e23d1f2089df 146 Gene3D G3DSA:3.30.300.70 2 77 9.2E-9 T 15-10-2018 IPR035956 RimP, N-terminal domain superfamily Trad_1348 61c75340432b698ad436e23d1f2089df 146 SUPERFAMILY SSF75420 3 78 4.71E-13 T 15-10-2018 IPR035956 RimP, N-terminal domain superfamily Trad_1348 61c75340432b698ad436e23d1f2089df 146 SUPERFAMILY SSF74942 81 135 6.54E-6 T 15-10-2018 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily Trad_1486 ff64320a42ed7fc0452bd924857e9551 398 Pfam PF02653 Branched-chain amino acid transport system / permease component 54 388 2.6E-44 T 15-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Trad_1074 50ce16335affb1d74cb9f79caba76894 252 SUPERFAMILY SSF52833 30 121 6.12E-7 T 15-10-2018 IPR036249 Thioredoxin-like superfamily Trad_0539 b0b4d1f9bd4e3a36da9b9e394f5c13f3 788 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 505 515 - T 15-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site Trad_0539 b0b4d1f9bd4e3a36da9b9e394f5c13f3 788 Pfam PF00082 Subtilase family 276 548 2.4E-49 T 15-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 Trad_0539 b0b4d1f9bd4e3a36da9b9e394f5c13f3 788 SUPERFAMILY SSF52743 256 564 8.51E-79 T 15-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Trad_0539 b0b4d1f9bd4e3a36da9b9e394f5c13f3 788 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 278 289 - T 15-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site Trad_0539 b0b4d1f9bd4e3a36da9b9e394f5c13f3 788 PRINTS PR00723 Subtilisin serine protease family (S8) signature 318 331 4.5E-19 T 15-10-2018 IPR015500 Peptidase S8, subtilisin-related Trad_0539 b0b4d1f9bd4e3a36da9b9e394f5c13f3 788 PRINTS PR00723 Subtilisin serine protease family (S8) signature 504 520 4.5E-19 T 15-10-2018 IPR015500 Peptidase S8, subtilisin-related Trad_0539 b0b4d1f9bd4e3a36da9b9e394f5c13f3 788 PRINTS PR00723 Subtilisin serine protease family (S8) signature 273 292 4.5E-19 T 15-10-2018 IPR015500 Peptidase S8, subtilisin-related Trad_0539 b0b4d1f9bd4e3a36da9b9e394f5c13f3 788 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 322 332 - T 15-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site Trad_0539 b0b4d1f9bd4e3a36da9b9e394f5c13f3 788 Gene3D G3DSA:3.40.50.200 246 569 4.5E-94 T 15-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Trad_0658 8b237aca82bd51309d40b20f032203c3 171 Pfam PF01202 Shikimate kinase 16 123 1.4E-17 T 15-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 Trad_0658 8b237aca82bd51309d40b20f032203c3 171 SUPERFAMILY SSF52540 7 165 1.59E-29 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_0658 8b237aca82bd51309d40b20f032203c3 171 Gene3D G3DSA:3.40.50.300 3 167 2.3E-62 T 15-10-2018 Trad_0658 8b237aca82bd51309d40b20f032203c3 171 TIGRFAM TIGR01313 therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family 11 144 1.2E-51 T 15-10-2018 IPR006001 Carbohydrate kinase, thermoresistant glucokinase GO:0005975|GO:0016301 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530 Trad_1115 d168e2afb57605191d0c3a519f5ad955 158 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 85 98 5.4E-18 T 15-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 Trad_1115 d168e2afb57605191d0c3a519f5ad955 158 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 117 130 5.4E-18 T 15-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 Trad_1115 d168e2afb57605191d0c3a519f5ad955 158 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 102 116 5.4E-18 T 15-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 Trad_1115 d168e2afb57605191d0c3a519f5ad955 158 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 156 4.6E-50 T 15-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 Trad_1115 d168e2afb57605191d0c3a519f5ad955 158 Gene3D G3DSA:2.40.50.100 79 156 2.5E-30 T 15-10-2018 Trad_1115 d168e2afb57605191d0c3a519f5ad955 158 SUPERFAMILY SSF51230 79 156 8.11E-25 T 15-10-2018 IPR011053 Single hybrid motif Trad_1115 d168e2afb57605191d0c3a519f5ad955 158 Pfam PF00364 Biotin-requiring enzyme 82 155 1.1E-21 T 15-10-2018 IPR000089 Biotin/lipoyl attachment Trad_2296 667bdddd111b7a9dab3feff07bdd168b 317 Pfam PF13407 Periplasmic binding protein domain 25 285 1.3E-57 T 15-10-2018 IPR025997 Periplasmic binding protein Trad_2296 667bdddd111b7a9dab3feff07bdd168b 317 Gene3D G3DSA:3.40.50.2300 32 293 2.5E-94 T 15-10-2018 Trad_2296 667bdddd111b7a9dab3feff07bdd168b 317 SUPERFAMILY SSF53822 24 314 1.21E-67 T 15-10-2018 IPR028082 Periplasmic binding protein-like I Trad_2296 667bdddd111b7a9dab3feff07bdd168b 317 Gene3D G3DSA:3.40.50.2300 126 301 2.5E-94 T 15-10-2018 Trad_1336 9157cd7ae19384972ccca067d4e4eb8f 634 Gene3D G3DSA:1.10.8.60 323 397 1.8E-28 T 15-10-2018 Trad_1336 9157cd7ae19384972ccca067d4e4eb8f 634 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 7 618 36.909 T 15-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 Trad_1336 9157cd7ae19384972ccca067d4e4eb8f 634 Gene3D G3DSA:1.20.58.760 398 599 2.6E-75 T 15-10-2018 Trad_1336 9157cd7ae19384972ccca067d4e4eb8f 634 Gene3D G3DSA:3.40.50.300 139 322 2.1E-67 T 15-10-2018 Trad_1336 9157cd7ae19384972ccca067d4e4eb8f 634 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 103 590 1.9E-226 T 15-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 Trad_1336 9157cd7ae19384972ccca067d4e4eb8f 634 SUPERFAMILY SSF52540 149 416 9.07E-72 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_1336 9157cd7ae19384972ccca067d4e4eb8f 634 SMART SM00382 185 324 1.4E-25 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_1336 9157cd7ae19384972ccca067d4e4eb8f 634 ProSitePatterns PS00674 AAA-protein family signature. 292 310 - T 15-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 Trad_1336 9157cd7ae19384972ccca067d4e4eb8f 634 Pfam PF01434 Peptidase family M41 384 588 1.7E-78 T 15-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 Trad_1336 9157cd7ae19384972ccca067d4e4eb8f 634 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 189 320 3.3E-44 T 15-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Trad_1336 9157cd7ae19384972ccca067d4e4eb8f 634 SUPERFAMILY SSF140990 403 600 1.26E-74 T 15-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 Trad_1431 025100f2e6418687309179e1350aaecf 97 Gene3D G3DSA:3.30.2310.20 4 97 3.7E-28 T 15-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily Trad_1431 025100f2e6418687309179e1350aaecf 97 Pfam PF05015 RelE-like toxin of type II toxin-antitoxin system HigB 7 97 3.9E-24 T 15-10-2018 IPR007711 Toxin HigB-1 Trad_1431 025100f2e6418687309179e1350aaecf 97 SUPERFAMILY SSF143011 11 97 7.98E-18 T 15-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily Trad_1632 2d16016bca5daefba972963810143c7a 628 Gene3D G3DSA:3.90.550.10 260 482 8.8E-30 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Trad_1632 2d16016bca5daefba972963810143c7a 628 Pfam PF13641 Glycosyltransferase like family 2 268 491 2.6E-25 T 15-10-2018 Trad_1632 2d16016bca5daefba972963810143c7a 628 SUPERFAMILY SSF53448 267 507 6.75E-43 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Trad_1552 a2e2d8c274e9e56f07da7945f4eed3fc 376 Pfam PF00188 Cysteine-rich secretory protein family 44 162 1.3E-14 T 15-10-2018 IPR014044 CAP domain Trad_1552 a2e2d8c274e9e56f07da7945f4eed3fc 376 SUPERFAMILY SSF55797 37 165 5.89E-23 T 15-10-2018 IPR035940 CAP superfamily Trad_1552 a2e2d8c274e9e56f07da7945f4eed3fc 376 Gene3D G3DSA:3.40.33.10 22 165 1.6E-35 T 15-10-2018 IPR035940 CAP superfamily Trad_2327 c89ea17dba734a2c3d36736fa64d6617 136 Pfam PF09685 Domain of unknown function (DUF4870) 23 136 4.9E-27 T 15-10-2018 IPR019109 Protein of unknown function DUF4870 Trad_0456 b01585ff15f6b6637b7c8b78f7ecd5fa 354 Pfam PF00557 Metallopeptidase family M24 137 338 1.5E-65 T 15-10-2018 IPR000994 Peptidase M24 Trad_0456 b01585ff15f6b6637b7c8b78f7ecd5fa 354 Gene3D G3DSA:3.90.230.10 127 353 4.5E-83 T 15-10-2018 Trad_0456 b01585ff15f6b6637b7c8b78f7ecd5fa 354 SUPERFAMILY SSF53092 8 128 3.84E-21 T 15-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal Trad_0456 b01585ff15f6b6637b7c8b78f7ecd5fa 354 SUPERFAMILY SSF55920 127 352 4.06E-78 T 15-10-2018 IPR036005 Creatinase/aminopeptidase-like Trad_0456 b01585ff15f6b6637b7c8b78f7ecd5fa 354 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 284 296 - T 15-10-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site Trad_0456 b01585ff15f6b6637b7c8b78f7ecd5fa 354 Pfam PF01321 Creatinase/Prolidase N-terminal domain 8 128 9.1E-22 T 15-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 Trad_0456 b01585ff15f6b6637b7c8b78f7ecd5fa 354 PRINTS PR00599 Methionine aminopeptidase-1 signature 306 318 7.1E-6 T 15-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Trad_0456 b01585ff15f6b6637b7c8b78f7ecd5fa 354 PRINTS PR00599 Methionine aminopeptidase-1 signature 208 224 7.1E-6 T 15-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Trad_0456 b01585ff15f6b6637b7c8b78f7ecd5fa 354 Gene3D G3DSA:3.40.350.10 2 126 4.8E-24 T 15-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal Trad_0530 30329cc5510b113cc183a675e5e9bb39 155 SUPERFAMILY SSF158442 11 132 1.12E-29 T 15-10-2018 IPR023380 DsbB-like superfamily Trad_0530 30329cc5510b113cc183a675e5e9bb39 155 Pfam PF02600 Disulfide bond formation protein DsbB 12 132 1.7E-10 T 15-10-2018 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 Trad_0530 30329cc5510b113cc183a675e5e9bb39 155 PIRSF PIRSF036659 1 140 1.2E-55 T 15-10-2018 IPR012187 Disulphide bond formation protein BdbC Trad_0530 30329cc5510b113cc183a675e5e9bb39 155 Gene3D G3DSA:1.20.1550.10 6 113 5.5E-9 T 15-10-2018 IPR023380 DsbB-like superfamily Trad_0530 30329cc5510b113cc183a675e5e9bb39 155 Hamap MF_00287 Probable disulfide formation protein [bdbC]. 3 138 24.246 T 15-10-2018 IPR012187 Disulphide bond formation protein BdbC Trad_2778 6f3f6ffa88e19ff808e664d158fb93a8 383 SUPERFAMILY SSF81464 32 121 2.13E-16 T 15-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Trad_2778 6f3f6ffa88e19ff808e664d158fb93a8 383 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 150 221 9.6E-19 T 15-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Trad_2778 6f3f6ffa88e19ff808e664d158fb93a8 383 SUPERFAMILY SSF46626 248 339 1.19E-16 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Trad_2778 6f3f6ffa88e19ff808e664d158fb93a8 383 Gene3D G3DSA:2.60.40.2600 123 350 1.1E-79 T 15-10-2018 Trad_2778 6f3f6ffa88e19ff808e664d158fb93a8 383 Gene3D G3DSA:1.10.287.90 30 120 3.4E-22 T 15-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Trad_2778 6f3f6ffa88e19ff808e664d158fb93a8 383 SUPERFAMILY SSF49503 123 279 1.04E-47 T 15-10-2018 IPR008972 Cupredoxin Trad_2778 6f3f6ffa88e19ff808e664d158fb93a8 383 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 35 112 2.8E-9 T 15-10-2018 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Trad_2778 6f3f6ffa88e19ff808e664d158fb93a8 383 TIGRFAM TIGR02866 CoxB: cytochrome c oxidase, subunit II 39 235 1.1E-57 T 15-10-2018 IPR014222 Cytochrome c oxidase, subunit II GO:0016021|GO:0016491 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Trad_2778 6f3f6ffa88e19ff808e664d158fb93a8 383 Pfam PF00034 Cytochrome c 250 338 5.2E-11 T 15-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Trad_0619 0f2c16d899867c409ca8c5249c27546e 343 SMART SM00382 38 170 4.4E-15 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_0619 0f2c16d899867c409ca8c5249c27546e 343 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 11 314 3.3E-140 T 15-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 Trad_0619 0f2c16d899867c409ca8c5249c27546e 343 SUPERFAMILY SSF46785 244 316 1.54E-21 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Trad_0619 0f2c16d899867c409ca8c5249c27546e 343 Gene3D G3DSA:1.10.8.60 169 244 3.1E-26 T 15-10-2018 Trad_0619 0f2c16d899867c409ca8c5249c27546e 343 SUPERFAMILY SSF52540 7 238 9.22E-51 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_0619 0f2c16d899867c409ca8c5249c27546e 343 Gene3D G3DSA:1.10.10.10 245 324 1.0E-30 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Trad_0619 0f2c16d899867c409ca8c5249c27546e 343 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 241 314 3.0E-31 T 15-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 Trad_0619 0f2c16d899867c409ca8c5249c27546e 343 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 343 153.94 T 15-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 Trad_0619 0f2c16d899867c409ca8c5249c27546e 343 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 239 314 1.0E-23 T 15-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 Trad_0619 0f2c16d899867c409ca8c5249c27546e 343 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 3 223 2.4E-105 T 15-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 Trad_0619 0f2c16d899867c409ca8c5249c27546e 343 Gene3D G3DSA:3.40.50.300 4 168 1.5E-39 T 15-10-2018 Trad_2877 23c126ef984f166f1c64567086d23430 476 SUPERFAMILY SSF161098 24 475 9.94E-62 T 15-10-2018 IPR035906 MetI-like superfamily Trad_2877 23c126ef984f166f1c64567086d23430 476 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 278 466 2.6E-18 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Trad_2877 23c126ef984f166f1c64567086d23430 476 Gene3D G3DSA:1.10.3720.10 217 463 1.3E-54 T 15-10-2018 IPR035906 MetI-like superfamily Trad_1959 a4cc3ea40f75a10afbca19507f7b721c 225 SUPERFAMILY SSF46785 139 213 9.79E-14 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Trad_1959 a4cc3ea40f75a10afbca19507f7b721c 225 SMART SM00100 9 126 1.8E-6 T 15-10-2018 IPR000595 Cyclic nucleotide-binding domain Trad_1959 a4cc3ea40f75a10afbca19507f7b721c 225 SMART SM00419 162 210 2.0E-8 T 15-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Trad_1959 a4cc3ea40f75a10afbca19507f7b721c 225 SUPERFAMILY SSF51206 27 133 6.68E-15 T 15-10-2018 IPR018490 Cyclic nucleotide-binding-like Trad_1959 a4cc3ea40f75a10afbca19507f7b721c 225 Gene3D G3DSA:1.10.10.10 134 216 2.4E-18 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Trad_1959 a4cc3ea40f75a10afbca19507f7b721c 225 Pfam PF13545 Crp-like helix-turn-helix domain 141 215 9.7E-15 T 15-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Trad_1959 a4cc3ea40f75a10afbca19507f7b721c 225 Pfam PF00027 Cyclic nucleotide-binding domain 28 100 3.6E-11 T 15-10-2018 IPR000595 Cyclic nucleotide-binding domain Trad_1959 a4cc3ea40f75a10afbca19507f7b721c 225 Gene3D G3DSA:2.60.120.10 22 133 3.1E-19 T 15-10-2018 IPR014710 RmlC-like jelly roll fold Trad_1993 ac98f4d244312c28ecbe1cf1741909d3 213 SUPERFAMILY SSF47240 4 154 4.26E-31 T 15-10-2018 IPR009078 Ferritin-like superfamily Trad_1993 ac98f4d244312c28ecbe1cf1741909d3 213 Pfam PF05974 Domain of unknown function (DUF892) 4 155 1.3E-33 T 15-10-2018 IPR010287 Domain of unknown function DUF892 Trad_1993 ac98f4d244312c28ecbe1cf1741909d3 213 Gene3D G3DSA:1.20.1260.10 1 167 2.4E-54 T 15-10-2018 IPR012347 Ferritin-like Trad_1494 f0aac463c9883e206fc2dcda85ea7f39 68 Pfam PF08113 Cytochrome c oxidase subunit IIa family 39 68 1.3E-4 T 15-10-2018 IPR012538 Cytochrome c oxidase polypeptide 2A KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 Trad_1546 91e707e1d63d993549b5d6fecf16c486 1131 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 1119 8.0E-47 T 15-10-2018 IPR003395 RecF/RecN/SMC, N-terminal Trad_1546 91e707e1d63d993549b5d6fecf16c486 1131 PIRSF PIRSF005719 738 1131 2.0E-59 T 15-10-2018 IPR024704 Structural maintenance of chromosomes protein Trad_1546 91e707e1d63d993549b5d6fecf16c486 1131 PIRSF PIRSF005719 1 733 3.2E-123 T 15-10-2018 IPR024704 Structural maintenance of chromosomes protein Trad_1546 91e707e1d63d993549b5d6fecf16c486 1131 SUPERFAMILY SSF75553 462 656 6.8E-35 T 15-10-2018 IPR036277 SMCs flexible hinge superfamily GO:0005515|GO:0005524|GO:0005694|GO:0051276 Trad_1546 91e707e1d63d993549b5d6fecf16c486 1131 Pfam PF06470 SMC proteins Flexible Hinge Domain 493 608 1.3E-23 T 15-10-2018 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 Trad_1546 91e707e1d63d993549b5d6fecf16c486 1131 Hamap MF_01894 Chromosome partition protein Smc [smc]. 1 1129 17.652 T 15-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 Trad_1546 91e707e1d63d993549b5d6fecf16c486 1131 SMART SM00968 493 609 1.3E-20 T 15-10-2018 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 Trad_1546 91e707e1d63d993549b5d6fecf16c486 1131 Gene3D G3DSA:3.30.70.1620 552 638 2.4E-40 T 15-10-2018 Trad_1546 91e707e1d63d993549b5d6fecf16c486 1131 SUPERFAMILY SSF52540 2 1123 4.93E-57 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_1546 91e707e1d63d993549b5d6fecf16c486 1131 Gene3D G3DSA:1.20.1060.20 476 650 2.4E-40 T 15-10-2018 Trad_1546 91e707e1d63d993549b5d6fecf16c486 1131 TIGRFAM TIGR02168 SMC_prok_B: chromosome segregation protein SMC 2 1125 6.9E-185 T 15-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 Trad_1546 91e707e1d63d993549b5d6fecf16c486 1131 Gene3D G3DSA:3.40.50.300 902 1131 1.5E-32 T 15-10-2018 Trad_1546 91e707e1d63d993549b5d6fecf16c486 1131 Gene3D G3DSA:3.40.50.300 1 242 1.2E-37 T 15-10-2018 Trad_0305 f86dfed835016e354e55351749ee1986 120 SUPERFAMILY SSF81301 16 115 1.18E-12 T 15-10-2018 Trad_0305 f86dfed835016e354e55351749ee1986 120 Pfam PF01909 Nucleotidyltransferase domain 25 103 1.5E-7 T 15-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 Trad_0305 f86dfed835016e354e55351749ee1986 120 Gene3D G3DSA:3.30.460.10 16 110 1.0E-9 T 15-10-2018 Trad_0866 6b80d47508871fc671f50df18d65254c 110 Pfam PF11338 Protein of unknown function (DUF3140) 9 99 9.7E-40 T 15-10-2018 IPR021487 Protein of unknown function DUF3140 Trad_2990 851ff1f97839374d87a2f93541472ef3 326 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 156 322 2.9E-33 T 15-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 Trad_2990 851ff1f97839374d87a2f93541472ef3 326 Hamap MF_01517 Malate dehydrogenase [mdh]. 1 325 56.885 T 15-10-2018 IPR010945 Malate dehydrogenase, type 2 GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 Trad_2990 851ff1f97839374d87a2f93541472ef3 326 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 5 144 3.1E-33 T 15-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 Trad_2990 851ff1f97839374d87a2f93541472ef3 326 Gene3D G3DSA:3.90.110.10 155 325 8.6E-65 T 15-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 Trad_2990 851ff1f97839374d87a2f93541472ef3 326 TIGRFAM TIGR01759 MalateDH-SF1: malate dehydrogenase 2 321 2.5E-153 T 15-10-2018 IPR010945 Malate dehydrogenase, type 2 GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 Trad_2990 851ff1f97839374d87a2f93541472ef3 326 SUPERFAMILY SSF51735 3 155 6.18E-44 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_2990 851ff1f97839374d87a2f93541472ef3 326 ProSitePatterns PS00068 Malate dehydrogenase active site signature. 155 167 - T 15-10-2018 IPR001252 Malate dehydrogenase, active site GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: R-HSA-70263 Trad_2990 851ff1f97839374d87a2f93541472ef3 326 PIRSF PIRSF000102 1 324 2.7E-65 T 15-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 Trad_2990 851ff1f97839374d87a2f93541472ef3 326 SUPERFAMILY SSF56327 156 325 9.26E-63 T 15-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 Trad_2990 851ff1f97839374d87a2f93541472ef3 326 Gene3D G3DSA:3.40.50.720 1 154 1.6E-56 T 15-10-2018 Trad_2627 013268a165559d9a3fbd912146ba0e07 231 Gene3D G3DSA:1.25.40.10 128 229 1.2E-9 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Trad_2627 013268a165559d9a3fbd912146ba0e07 231 Pfam PF13432 Tetratricopeptide repeat 167 208 0.0014 T 15-10-2018 Trad_2627 013268a165559d9a3fbd912146ba0e07 231 Gene3D G3DSA:1.25.40.10 15 127 1.3E-12 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Trad_2627 013268a165559d9a3fbd912146ba0e07 231 SUPERFAMILY SSF48452 23 209 1.47E-18 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Trad_1573 24b44199261c454a8bc0c68cfe6b2751 465 SUPERFAMILY SSF161098 276 451 3.53E-25 T 15-10-2018 IPR035906 MetI-like superfamily Trad_1573 24b44199261c454a8bc0c68cfe6b2751 465 Gene3D G3DSA:1.10.3720.10 246 454 5.9E-20 T 15-10-2018 IPR035906 MetI-like superfamily Trad_1573 24b44199261c454a8bc0c68cfe6b2751 465 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 198 453 2.8E-15 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Trad_1573 24b44199261c454a8bc0c68cfe6b2751 465 SUPERFAMILY SSF161098 179 242 5.23E-5 T 15-10-2018 IPR035906 MetI-like superfamily Trad_1054 2136d219fe9d69f94c4cd269bd97879d 115 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 2 115 25.346 T 15-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Trad_1054 2136d219fe9d69f94c4cd269bd97879d 115 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 6 115 3.7E-37 T 15-10-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_1054 2136d219fe9d69f94c4cd269bd97879d 115 Gene3D G3DSA:3.30.420.100 2 115 6.0E-38 T 15-10-2018 Trad_1054 2136d219fe9d69f94c4cd269bd97879d 115 SUPERFAMILY SSF53137 8 113 2.83E-41 T 15-10-2018 Trad_1054 2136d219fe9d69f94c4cd269bd97879d 115 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 7 115 1.1E-36 T 15-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Trad_2443 22189c0fbdbc96adabf192d928f3eca5 307 SUPERFAMILY SSF161098 28 302 2.24E-69 T 15-10-2018 IPR035906 MetI-like superfamily Trad_2443 22189c0fbdbc96adabf192d928f3eca5 307 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 299 8.7E-21 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Trad_2443 22189c0fbdbc96adabf192d928f3eca5 307 Gene3D G3DSA:1.10.3720.10 24 292 9.6E-67 T 15-10-2018 IPR035906 MetI-like superfamily Trad_0070 24bf7dac54091fe2eb912f00af05ff9f 77 Gene3D G3DSA:3.30.300.20 8 68 1.8E-6 T 15-10-2018 IPR015946 K homology domain-like, alpha/beta Trad_0070 24bf7dac54091fe2eb912f00af05ff9f 77 SUPERFAMILY SSF54814 10 62 1.24E-6 T 15-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 Trad_0070 24bf7dac54091fe2eb912f00af05ff9f 77 Hamap MF_00088 UPF0109 protein . 2 75 15.836 T 15-10-2018 IPR020627 Uncharacterised protein family UPF0109 Trad_0070 24bf7dac54091fe2eb912f00af05ff9f 77 Pfam PF13083 KH domain 4 72 1.3E-18 T 15-10-2018 Trad_0146 8cc4801ea6c8dca8848225d0bc5fa700 595 Gene3D G3DSA:3.90.245.10 221 425 1.0E-33 T 15-10-2018 IPR036452 Ribonucleoside hydrolase-like Trad_0146 8cc4801ea6c8dca8848225d0bc5fa700 595 SUPERFAMILY SSF53590 235 400 6.54E-18 T 15-10-2018 IPR036452 Ribonucleoside hydrolase-like Trad_0146 8cc4801ea6c8dca8848225d0bc5fa700 595 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 236 399 4.1E-12 T 15-10-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain Trad_0104 08518fe334264d6899efef290e9fc141 352 SUPERFAMILY SSF56059 116 334 1.57E-5 T 15-10-2018 Trad_0104 08518fe334264d6899efef290e9fc141 352 Pfam PF14397 Sugar-transfer associated ATP-grasp 75 329 5.0E-34 T 15-10-2018 IPR039523 Alpha-L-glutamate ligase-related protein, ATP-grasp domain KEGG: 00270+6.3.2.2+6.3.2.3|KEGG: 00480+6.3.2.2+6.3.2.3|MetaCyc: PWY-6840|MetaCyc: PWY-7255 Trad_2182 5b894c53cb79edbef233f9440978f95d 436 SUPERFAMILY SSF53850 35 430 2.07E-74 T 15-10-2018 Trad_2182 5b894c53cb79edbef233f9440978f95d 436 Gene3D G3DSA:3.40.190.10 51 382 4.8E-94 T 15-10-2018 Trad_2182 5b894c53cb79edbef233f9440978f95d 436 Pfam PF01547 Bacterial extracellular solute-binding protein 49 343 1.5E-40 T 15-10-2018 IPR006059 Bacterial extracellular solute-binding protein Trad_2182 5b894c53cb79edbef233f9440978f95d 436 Gene3D G3DSA:3.40.190.10 156 421 4.8E-94 T 15-10-2018 Trad_0001 8dd7ef365f21ee7beb632d356339c5e4 444 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 355 422 1.7E-26 T 15-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 Trad_0001 8dd7ef365f21ee7beb632d356339c5e4 444 Gene3D G3DSA:3.30.300.180 2 82 3.8E-20 T 15-10-2018 IPR038454 DnaA, N-terminal domain superfamily Trad_0001 8dd7ef365f21ee7beb632d356339c5e4 444 Gene3D G3DSA:3.40.50.300 96 274 3.5E-51 T 15-10-2018 Trad_0001 8dd7ef365f21ee7beb632d356339c5e4 444 Pfam PF11638 DnaA N-terminal domain 6 68 7.7E-16 T 15-10-2018 IPR024633 DnaA N-terminal domain Trad_0001 8dd7ef365f21ee7beb632d356339c5e4 444 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 9 442 1.8E-162 T 15-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 Trad_0001 8dd7ef365f21ee7beb632d356339c5e4 444 SMART SM00382 142 270 5.3E-9 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_0001 8dd7ef365f21ee7beb632d356339c5e4 444 Gene3D G3DSA:1.10.1750.10 347 444 2.2E-30 T 15-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 Trad_0001 8dd7ef365f21ee7beb632d356339c5e4 444 SUPERFAMILY SSF48295 342 443 3.4E-30 T 15-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 Trad_0001 8dd7ef365f21ee7beb632d356339c5e4 444 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 6 444 32.159 T 15-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 Trad_0001 8dd7ef365f21ee7beb632d356339c5e4 444 Pfam PF00308 Bacterial dnaA protein 110 327 2.8E-94 T 15-10-2018 IPR013317 Chromosomal replication initiator protein DnaA Trad_0001 8dd7ef365f21ee7beb632d356339c5e4 444 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 143 163 4.4E-48 T 15-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like Trad_0001 8dd7ef365f21ee7beb632d356339c5e4 444 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 403 422 4.4E-48 T 15-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like Trad_0001 8dd7ef365f21ee7beb632d356339c5e4 444 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 241 268 4.4E-48 T 15-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like Trad_0001 8dd7ef365f21ee7beb632d356339c5e4 444 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 207 221 4.4E-48 T 15-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like Trad_0001 8dd7ef365f21ee7beb632d356339c5e4 444 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 175 189 4.4E-48 T 15-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like Trad_0001 8dd7ef365f21ee7beb632d356339c5e4 444 ProSitePatterns PS01008 DnaA protein signature. 403 422 - T 15-10-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 Trad_0001 8dd7ef365f21ee7beb632d356339c5e4 444 SMART SM00760 353 422 7.3E-34 T 15-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 Trad_0001 8dd7ef365f21ee7beb632d356339c5e4 444 SUPERFAMILY SSF52540 109 321 6.5E-45 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_0001 8dd7ef365f21ee7beb632d356339c5e4 444 Gene3D G3DSA:1.10.8.60 276 346 7.3E-23 T 15-10-2018 Trad_0751 d35937f86e5b2ad276348b1ea4061751 337 Gene3D G3DSA:3.40.30.10 15 138 1.2E-9 T 15-10-2018 Trad_0751 d35937f86e5b2ad276348b1ea4061751 337 SUPERFAMILY SSF52833 171 334 2.97E-5 T 15-10-2018 IPR036249 Thioredoxin-like superfamily Trad_0751 d35937f86e5b2ad276348b1ea4061751 337 SUPERFAMILY SSF52833 27 128 7.48E-11 T 15-10-2018 IPR036249 Thioredoxin-like superfamily Trad_2710 7bb25cbce02493bc2de0c7f3f3fea671 129 Gene3D G3DSA:3.40.50.1010 4 127 7.6E-12 T 15-10-2018 Trad_2710 7bb25cbce02493bc2de0c7f3f3fea671 129 Pfam PF01850 PIN domain 12 118 4.6E-5 T 15-10-2018 IPR002716 PIN domain Trad_2710 7bb25cbce02493bc2de0c7f3f3fea671 129 SUPERFAMILY SSF88723 17 118 1.09E-10 T 15-10-2018 IPR029060 PIN-like domain superfamily Trad_0405 0d82cde48a57358e37e56dbe18e2de9f 364 Pfam PF02163 Peptidase family M50 7 348 3.0E-56 T 15-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 Trad_0405 0d82cde48a57358e37e56dbe18e2de9f 364 SMART SM00228 110 194 7.7E-6 T 15-10-2018 IPR001478 PDZ domain GO:0005515 Trad_0405 0d82cde48a57358e37e56dbe18e2de9f 364 SUPERFAMILY SSF50156 99 199 3.73E-12 T 15-10-2018 IPR036034 PDZ superfamily GO:0005515 Trad_0405 0d82cde48a57358e37e56dbe18e2de9f 364 Gene3D G3DSA:2.30.42.10 115 202 5.4E-12 T 15-10-2018 Trad_1313 b9507ea041ddda557ca5c22e0f4a7e77 149 PIRSF PIRSF019345 1 146 7.6E-42 T 15-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 Trad_1313 b9507ea041ddda557ca5c22e0f4a7e77 149 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 8 142 9.3E-31 T 15-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 Trad_1313 b9507ea041ddda557ca5c22e0f4a7e77 149 Gene3D G3DSA:1.10.10.10 55 146 8.2E-34 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Trad_1313 b9507ea041ddda557ca5c22e0f4a7e77 149 Pfam PF04079 Segregation and condensation complex subunit ScpB 3 139 5.1E-42 T 15-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 Trad_1313 b9507ea041ddda557ca5c22e0f4a7e77 149 SUPERFAMILY SSF46785 59 130 9.98E-22 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Trad_1313 b9507ea041ddda557ca5c22e0f4a7e77 149 Gene3D G3DSA:1.10.10.10 2 54 2.6E-5 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Trad_2097 4c33540f9a3839021a458aa9784c6216 328 PRINTS PR00134 Glycosyl hydrolase family 10 signature 104 116 2.9E-7 T 15-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 Trad_2097 4c33540f9a3839021a458aa9784c6216 328 PRINTS PR00134 Glycosyl hydrolase family 10 signature 145 156 2.9E-7 T 15-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 Trad_2097 4c33540f9a3839021a458aa9784c6216 328 PRINTS PR00134 Glycosyl hydrolase family 10 signature 218 230 2.9E-7 T 15-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 Trad_2097 4c33540f9a3839021a458aa9784c6216 328 PRINTS PR00134 Glycosyl hydrolase family 10 signature 190 201 2.9E-7 T 15-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 Trad_2097 4c33540f9a3839021a458aa9784c6216 328 Gene3D G3DSA:3.20.20.80 37 328 2.3E-84 T 15-10-2018 Trad_2097 4c33540f9a3839021a458aa9784c6216 328 SUPERFAMILY SSF51445 38 324 1.83E-84 T 15-10-2018 IPR017853 Glycoside hydrolase superfamily Trad_2097 4c33540f9a3839021a458aa9784c6216 328 SMART SM00633 73 324 1.9E-22 T 15-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 Trad_2097 4c33540f9a3839021a458aa9784c6216 328 ProSitePatterns PS00591 Glycosyl hydrolases family 10 (GH10) active site. 251 261 - T 15-10-2018 IPR031158 Glycosyl hydrolases family 10, active site MetaCyc: PWY-6717|MetaCyc: PWY-6784 Trad_2097 4c33540f9a3839021a458aa9784c6216 328 Pfam PF00331 Glycosyl hydrolase family 10 60 316 3.0E-55 T 15-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 Trad_1485 69061ee2a0f34dff6ea4c2abafbf4548 531 SMART SM00382 301 518 2.0E-4 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_1485 69061ee2a0f34dff6ea4c2abafbf4548 531 SMART SM00382 42 232 7.0E-9 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_1485 69061ee2a0f34dff6ea4c2abafbf4548 531 Pfam PF00005 ABC transporter 33 184 1.7E-28 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Trad_1485 69061ee2a0f34dff6ea4c2abafbf4548 531 Gene3D G3DSA:3.40.50.300 7 247 8.7E-56 T 15-10-2018 Trad_1485 69061ee2a0f34dff6ea4c2abafbf4548 531 ProSitePatterns PS00211 ABC transporters family signature. 421 435 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Trad_1485 69061ee2a0f34dff6ea4c2abafbf4548 531 SUPERFAMILY SSF52540 16 238 6.1E-56 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_1485 69061ee2a0f34dff6ea4c2abafbf4548 531 Pfam PF00005 ABC transporter 293 448 2.1E-15 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Trad_1485 69061ee2a0f34dff6ea4c2abafbf4548 531 SUPERFAMILY SSF52540 257 503 3.55E-43 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_1485 69061ee2a0f34dff6ea4c2abafbf4548 531 Gene3D G3DSA:3.40.50.300 284 522 1.2E-41 T 15-10-2018 Trad_0846 666f9c79ba6ec61bc4029b6a614542b1 416 Pfam PF13416 Bacterial extracellular solute-binding protein 41 347 9.4E-34 T 15-10-2018 IPR006059 Bacterial extracellular solute-binding protein Trad_0846 666f9c79ba6ec61bc4029b6a614542b1 416 Gene3D G3DSA:3.40.190.10 134 399 1.3E-56 T 15-10-2018 Trad_0846 666f9c79ba6ec61bc4029b6a614542b1 416 SUPERFAMILY SSF53850 19 409 5.89E-62 T 15-10-2018 Trad_0846 666f9c79ba6ec61bc4029b6a614542b1 416 Gene3D G3DSA:3.40.190.10 40 348 1.3E-56 T 15-10-2018 Trad_0846 666f9c79ba6ec61bc4029b6a614542b1 416 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 130 147 - T 15-10-2018 IPR006061 Solute-binding family 1, conserved site GO:0055085 Trad_2602 f4038bc3692fe629d453f477937050ac 626 SUPERFAMILY SSF52922 486 609 1.57E-26 T 15-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Trad_2602 f4038bc3692fe629d453f477937050ac 626 Gene3D G3DSA:3.40.50.970 309 489 4.0E-61 T 15-10-2018 Trad_2602 f4038bc3692fe629d453f477937050ac 626 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 3 616 40.765 T 15-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Trad_2602 f4038bc3692fe629d453f477937050ac 626 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 4 278 1.2E-105 T 15-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Trad_2602 f4038bc3692fe629d453f477937050ac 626 Gene3D G3DSA:3.40.50.920 490 620 1.8E-39 T 15-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Trad_2602 f4038bc3692fe629d453f477937050ac 626 SUPERFAMILY SSF52518 310 499 2.09E-51 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold Trad_2602 f4038bc3692fe629d453f477937050ac 626 Pfam PF02779 Transketolase, pyrimidine binding domain 312 472 6.5E-35 T 15-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Trad_2602 f4038bc3692fe629d453f477937050ac 626 SMART SM00861 312 476 9.9E-57 T 15-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Trad_2602 f4038bc3692fe629d453f477937050ac 626 Pfam PF02780 Transketolase, C-terminal domain 490 605 4.9E-25 T 15-10-2018 IPR033248 Transketolase, C-terminal domain Trad_2602 f4038bc3692fe629d453f477937050ac 626 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 6 608 4.8E-213 T 15-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Trad_2602 f4038bc3692fe629d453f477937050ac 626 SUPERFAMILY SSF52518 3 374 1.52E-65 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold Trad_2560 01cecb74a786507f7399232207acd4a2 665 SUPERFAMILY SSF52518 9 329 1.16E-112 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold Trad_2560 01cecb74a786507f7399232207acd4a2 665 Gene3D G3DSA:3.40.50.920 538 664 8.4E-44 T 15-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Trad_2560 01cecb74a786507f7399232207acd4a2 665 Gene3D G3DSA:3.40.50.970 335 534 3.4E-76 T 15-10-2018 Trad_2560 01cecb74a786507f7399232207acd4a2 665 ProSitePatterns PS00801 Transketolase signature 1. 19 39 - T 15-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Trad_2560 01cecb74a786507f7399232207acd4a2 665 Pfam PF02780 Transketolase, C-terminal domain 540 655 1.7E-13 T 15-10-2018 IPR033248 Transketolase, C-terminal domain Trad_2560 01cecb74a786507f7399232207acd4a2 665 SMART SM00861 358 528 3.7E-68 T 15-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Trad_2560 01cecb74a786507f7399232207acd4a2 665 TIGRFAM TIGR00232 tktlase_bact: transketolase 14 663 2.5E-273 T 15-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 Trad_2560 01cecb74a786507f7399232207acd4a2 665 Pfam PF02779 Transketolase, pyrimidine binding domain 357 528 7.9E-47 T 15-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Trad_2560 01cecb74a786507f7399232207acd4a2 665 SUPERFAMILY SSF52922 535 664 1.14E-42 T 15-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Trad_2560 01cecb74a786507f7399232207acd4a2 665 Gene3D G3DSA:3.40.50.970 8 334 6.7E-120 T 15-10-2018 Trad_2560 01cecb74a786507f7399232207acd4a2 665 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 13 340 1.5E-146 T 15-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Trad_2560 01cecb74a786507f7399232207acd4a2 665 SUPERFAMILY SSF52518 346 529 2.71E-69 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold Trad_2797 dac27c3a644e0f44a7fd2002fcc69f50 316 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 41 59 - T 15-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 Trad_2797 dac27c3a644e0f44a7fd2002fcc69f50 316 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 18 299 1.1E-70 T 15-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Trad_2797 dac27c3a644e0f44a7fd2002fcc69f50 316 TIGRFAM TIGR01139 cysK: cysteine synthase A 18 313 2.5E-124 T 15-10-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 Trad_2797 dac27c3a644e0f44a7fd2002fcc69f50 316 Gene3D G3DSA:3.40.50.1100 53 155 7.0E-115 T 15-10-2018 Trad_2797 dac27c3a644e0f44a7fd2002fcc69f50 316 TIGRFAM TIGR01136 cysKM: cysteine synthase 17 313 3.0E-121 T 15-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 Trad_2797 dac27c3a644e0f44a7fd2002fcc69f50 316 Gene3D G3DSA:3.40.50.1100 18 308 7.0E-115 T 15-10-2018 Trad_2797 dac27c3a644e0f44a7fd2002fcc69f50 316 SUPERFAMILY SSF53686 14 314 1.13E-97 T 15-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Trad_1649 3b720662482efad2df6b79a93238f7bd 632 SUPERFAMILY SSF81296 40 117 7.7E-5 T 15-10-2018 IPR014756 Immunoglobulin E-set Trad_1649 3b720662482efad2df6b79a93238f7bd 632 SUPERFAMILY SSF51011 554 630 1.54E-9 T 15-10-2018 Trad_1649 3b720662482efad2df6b79a93238f7bd 632 Gene3D G3DSA:2.60.40.1180 549 631 2.7E-14 T 15-10-2018 IPR013780 Glycosyl hydrolase, all-beta Trad_1649 3b720662482efad2df6b79a93238f7bd 632 PIRSF PIRSF036918 11 630 4.4E-221 T 15-10-2018 IPR017069 Maltodextrin glucosidase GO:0004558|GO:0005737|GO:0005975 KEGG: 00052+3.2.1.20|KEGG: 00500+3.2.1.20|MetaCyc: PWY-842 Trad_1649 3b720662482efad2df6b79a93238f7bd 632 Gene3D G3DSA:3.20.20.80 124 547 1.5E-138 T 15-10-2018 Trad_1649 3b720662482efad2df6b79a93238f7bd 632 Pfam PF00128 Alpha amylase, catalytic domain 183 518 9.5E-73 T 15-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Trad_1649 3b720662482efad2df6b79a93238f7bd 632 SMART SM00642 135 545 1.6E-97 T 15-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Trad_1649 3b720662482efad2df6b79a93238f7bd 632 SUPERFAMILY SSF51445 126 554 2.73E-101 T 15-10-2018 IPR017853 Glycoside hydrolase superfamily Trad_2792 83424880a8b3c8cdca508ae95482f8c8 307 Pfam PF00698 Acyl transferase domain 5 273 1.1E-34 T 15-10-2018 IPR014043 Acyl transferase Trad_2792 83424880a8b3c8cdca508ae95482f8c8 307 PIRSF PIRSF000446 1 305 7.2E-84 T 15-10-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 Trad_2792 83424880a8b3c8cdca508ae95482f8c8 307 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 5 299 2.4E-38 T 15-10-2018 IPR020801 Polyketide synthase, acyl transferase domain Trad_2792 83424880a8b3c8cdca508ae95482f8c8 307 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 2 285 1.9E-85 T 15-10-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 Trad_2792 83424880a8b3c8cdca508ae95482f8c8 307 SUPERFAMILY SSF55048 127 194 1.23E-15 T 15-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding Trad_2792 83424880a8b3c8cdca508ae95482f8c8 307 Gene3D G3DSA:3.30.70.250 122 194 2.9E-92 T 15-10-2018 Trad_2792 83424880a8b3c8cdca508ae95482f8c8 307 SUPERFAMILY SSF52151 2 302 3.4E-64 T 15-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Trad_2792 83424880a8b3c8cdca508ae95482f8c8 307 Gene3D G3DSA:3.40.366.10 5 282 2.9E-92 T 15-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 Trad_0147 474e2e04a16daa1fa33d87ae0e92315a 910 Pfam PF00330 Aconitase family (aconitate hydratase) 79 572 4.6E-184 T 15-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Trad_0147 474e2e04a16daa1fa33d87ae0e92315a 910 Gene3D G3DSA:3.20.19.10 663 902 7.6E-104 T 15-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 Trad_0147 474e2e04a16daa1fa33d87ae0e92315a 910 PRINTS PR00415 Aconitase family signature 173 181 4.9E-43 T 15-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Trad_0147 474e2e04a16daa1fa33d87ae0e92315a 910 PRINTS PR00415 Aconitase family signature 149 162 4.9E-43 T 15-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Trad_0147 474e2e04a16daa1fa33d87ae0e92315a 910 PRINTS PR00415 Aconitase family signature 376 390 4.9E-43 T 15-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Trad_0147 474e2e04a16daa1fa33d87ae0e92315a 910 PRINTS PR00415 Aconitase family signature 220 235 4.9E-43 T 15-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Trad_0147 474e2e04a16daa1fa33d87ae0e92315a 910 PRINTS PR00415 Aconitase family signature 206 219 4.9E-43 T 15-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Trad_0147 474e2e04a16daa1fa33d87ae0e92315a 910 PRINTS PR00415 Aconitase family signature 282 295 4.9E-43 T 15-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Trad_0147 474e2e04a16daa1fa33d87ae0e92315a 910 PRINTS PR00415 Aconitase family signature 296 309 4.9E-43 T 15-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Trad_0147 474e2e04a16daa1fa33d87ae0e92315a 910 PRINTS PR00415 Aconitase family signature 441 452 4.9E-43 T 15-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Trad_0147 474e2e04a16daa1fa33d87ae0e92315a 910 PRINTS PR00415 Aconitase family signature 503 516 4.9E-43 T 15-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Trad_0147 474e2e04a16daa1fa33d87ae0e92315a 910 SUPERFAMILY SSF52016 641 900 5.3E-88 T 15-10-2018 Trad_0147 474e2e04a16daa1fa33d87ae0e92315a 910 ProSitePatterns PS01244 Aconitase family signature 2. 503 516 - T 15-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 Trad_0147 474e2e04a16daa1fa33d87ae0e92315a 910 SUPERFAMILY SSF53732 8 637 2.22E-224 T 15-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 Trad_0147 474e2e04a16daa1fa33d87ae0e92315a 910 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 22 901 0.0 T 15-10-2018 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-917937 Trad_0147 474e2e04a16daa1fa33d87ae0e92315a 910 Pfam PF00694 Aconitase C-terminal domain 702 828 2.5E-44 T 15-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 Trad_0147 474e2e04a16daa1fa33d87ae0e92315a 910 Gene3D G3DSA:3.30.499.20 9 376 4.2E-161 T 15-10-2018 Trad_0147 474e2e04a16daa1fa33d87ae0e92315a 910 ProSitePatterns PS00450 Aconitase family signature 1. 437 453 - T 15-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 Trad_0147 474e2e04a16daa1fa33d87ae0e92315a 910 Gene3D G3DSA:1.10.1440.20 602 662 2.7E-21 T 15-10-2018 Trad_0147 474e2e04a16daa1fa33d87ae0e92315a 910 Gene3D G3DSA:3.30.499.10 377 600 2.7E-108 T 15-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 Trad_2399 ef6b9d683771640383fc7d6a06d3ccd2 403 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 75 84 - T 15-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 Trad_2399 ef6b9d683771640383fc7d6a06d3ccd2 403 Pfam PF07687 Peptidase dimerisation domain 180 277 6.9E-16 T 15-10-2018 IPR011650 Peptidase M20, dimerisation domain Trad_2399 ef6b9d683771640383fc7d6a06d3ccd2 403 Gene3D G3DSA:3.40.630.10 24 384 3.1E-79 T 15-10-2018 Trad_2399 ef6b9d683771640383fc7d6a06d3ccd2 403 SUPERFAMILY SSF55031 183 286 1.05E-12 T 15-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain Trad_2399 ef6b9d683771640383fc7d6a06d3ccd2 403 Pfam PF01546 Peptidase family M20/M25/M40 76 396 3.4E-28 T 15-10-2018 IPR002933 Peptidase M20 GO:0016787 Trad_2399 ef6b9d683771640383fc7d6a06d3ccd2 403 Gene3D G3DSA:3.30.70.360 182 306 3.1E-79 T 15-10-2018 Trad_2399 ef6b9d683771640383fc7d6a06d3ccd2 403 SUPERFAMILY SSF53187 16 398 2.05E-44 T 15-10-2018 Trad_1275 f734f1b7cc690d41a8ae0d42615444a5 219 Pfam PF03167 Uracil DNA glycosylase superfamily 41 191 5.9E-47 T 15-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Trad_1275 f734f1b7cc690d41a8ae0d42615444a5 219 SUPERFAMILY SSF52141 30 199 5.89E-61 T 15-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Trad_1275 f734f1b7cc690d41a8ae0d42615444a5 219 SMART SM00986 41 192 2.4E-43 T 15-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Trad_1275 f734f1b7cc690d41a8ae0d42615444a5 219 TIGRFAM TIGR00758 UDG_fam4: uracil-DNA glycosylase, family 4 32 182 1.7E-54 T 15-10-2018 IPR005273 Uracil-DNA glycosylase family 4 Trad_1275 f734f1b7cc690d41a8ae0d42615444a5 219 Gene3D G3DSA:3.40.470.10 14 218 1.5E-68 T 15-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Trad_1275 f734f1b7cc690d41a8ae0d42615444a5 219 SMART SM00987 41 192 2.4E-43 T 15-10-2018 Trad_2065 ce9855053d97462806b729c7db812c24 467 Gene3D G3DSA:3.30.565.10 318 457 2.1E-25 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Trad_2065 ce9855053d97462806b729c7db812c24 467 SUPERFAMILY SSF55874 327 455 2.88E-27 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Trad_2065 ce9855053d97462806b729c7db812c24 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 416 434 1.8E-7 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Trad_2065 ce9855053d97462806b729c7db812c24 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 377 391 1.8E-7 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Trad_2065 ce9855053d97462806b729c7db812c24 467 SMART SM00387 342 456 1.2E-22 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Trad_2065 ce9855053d97462806b729c7db812c24 467 SUPERFAMILY SSF47384 229 306 3.92E-15 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Trad_2065 ce9855053d97462806b729c7db812c24 467 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 343 453 1.8E-13 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Trad_2065 ce9855053d97462806b729c7db812c24 467 SMART SM00388 246 308 5.9E-15 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Trad_2065 ce9855053d97462806b729c7db812c24 467 Pfam PF00512 His Kinase A (phospho-acceptor) domain 247 307 7.1E-15 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Trad_2065 ce9855053d97462806b729c7db812c24 467 Gene3D G3DSA:1.10.287.130 191 309 3.0E-19 T 15-10-2018 Trad_0442 1cedc204e5cbd4cb8b741b67569ed073 103 Gene3D G3DSA:1.10.3830.10 1 96 3.1E-29 T 15-10-2018 IPR036945 Diacylglycerol kinase (DAGK) superfamily GO:0008610|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 Trad_0442 1cedc204e5cbd4cb8b741b67569ed073 103 Pfam PF01219 Prokaryotic diacylglycerol kinase 3 93 4.6E-27 T 15-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 Trad_0112 6834b29eab63c5d63d4b39495e16a1ed 343 Gene3D G3DSA:1.10.3470.10 3 340 1.6E-105 T 15-10-2018 IPR037294 ABC transporter, BtuC-like Trad_0112 6834b29eab63c5d63d4b39495e16a1ed 343 SUPERFAMILY SSF81345 4 333 3.53E-83 T 15-10-2018 IPR037294 ABC transporter, BtuC-like Trad_0112 6834b29eab63c5d63d4b39495e16a1ed 343 Pfam PF01032 FecCD transport family 19 333 1.4E-93 T 15-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 Trad_2047 76c33eeba10e969c2b7408bb15cd72d9 353 Pfam PF03739 Predicted permease YjgP/YjgQ family 9 348 3.2E-57 T 15-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 Trad_0479 879811dc5e03a1380e441785de4dc438 193 SUPERFAMILY SSF52972 2 191 7.06E-61 T 15-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like Trad_0479 879811dc5e03a1380e441785de4dc438 193 Pfam PF01725 Ham1 family 4 189 1.5E-53 T 15-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 Trad_0479 879811dc5e03a1380e441785de4dc438 193 Hamap MF_01405 dITP/XTP pyrophosphatase. 1 192 44.277 T 15-10-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.66 Trad_0479 879811dc5e03a1380e441785de4dc438 193 Gene3D G3DSA:3.90.950.10 1 193 1.4E-69 T 15-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like Trad_0479 879811dc5e03a1380e441785de4dc438 193 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 2 190 9.5E-52 T 15-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 Trad_1587 a9c4064db854ce4135164ddefa80761e 764 Hamap MF_00983 Probable primosomal protein N' [priA]. 24 759 17.267 T 15-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 Trad_1587 a9c4064db854ce4135164ddefa80761e 764 SUPERFAMILY SSF52540 296 375 3.4E-6 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_1587 a9c4064db854ce4135164ddefa80761e 764 Gene3D G3DSA:1.10.8.630 21 129 7.1E-13 T 15-10-2018 Trad_1587 a9c4064db854ce4135164ddefa80761e 764 TIGRFAM TIGR00595 priA: primosomal protein N' 293 756 7.0E-74 T 15-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 Trad_1587 a9c4064db854ce4135164ddefa80761e 764 Gene3D G3DSA:3.40.50.300 290 428 1.6E-17 T 15-10-2018 Trad_0565 7c13db2d5b91fba41e53d9e085eb451c 273 Pfam PF00520 Ion transport protein 27 242 3.2E-31 T 15-10-2018 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 Trad_0565 7c13db2d5b91fba41e53d9e085eb451c 273 Gene3D G3DSA:1.20.120.350 5 136 4.7E-24 T 15-10-2018 IPR027359 Voltage-dependent channel domain superfamily Trad_0565 7c13db2d5b91fba41e53d9e085eb451c 273 SUPERFAMILY SSF81324 26 238 3.14E-49 T 15-10-2018 Trad_0565 7c13db2d5b91fba41e53d9e085eb451c 273 PRINTS PR00169 Potassium channel signature 182 204 5.8E-36 T 15-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 Trad_0565 7c13db2d5b91fba41e53d9e085eb451c 273 PRINTS PR00169 Potassium channel signature 20 48 5.8E-36 T 15-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 Trad_0565 7c13db2d5b91fba41e53d9e085eb451c 273 PRINTS PR00169 Potassium channel signature 62 85 5.8E-36 T 15-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 Trad_0565 7c13db2d5b91fba41e53d9e085eb451c 273 PRINTS PR00169 Potassium channel signature 124 150 5.8E-36 T 15-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 Trad_0565 7c13db2d5b91fba41e53d9e085eb451c 273 PRINTS PR00169 Potassium channel signature 88 108 5.8E-36 T 15-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 Trad_0565 7c13db2d5b91fba41e53d9e085eb451c 273 PRINTS PR00169 Potassium channel signature 153 176 5.8E-36 T 15-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 Trad_0565 7c13db2d5b91fba41e53d9e085eb451c 273 PRINTS PR00169 Potassium channel signature 211 237 5.8E-36 T 15-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 Trad_0565 7c13db2d5b91fba41e53d9e085eb451c 273 Gene3D G3DSA:1.10.287.70 137 245 5.0E-28 T 15-10-2018 Trad_1390 7b277fdb59a8b1f6fd0aebe70c4b10ed 165 Pfam PF00694 Aconitase C-terminal domain 49 98 1.6E-17 T 15-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 Trad_1390 7b277fdb59a8b1f6fd0aebe70c4b10ed 165 Gene3D G3DSA:3.20.19.10 1 157 5.2E-48 T 15-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 Trad_1390 7b277fdb59a8b1f6fd0aebe70c4b10ed 165 Hamap MF_01032 Methanogen homoaconitase small subunit [hacB]. 1 159 32.376 T 15-10-2018 IPR011827 Hydrolyase LeuD/HacB/DmdB GO:0016836 KEGG: 00290+4.2.1.33 Trad_1390 7b277fdb59a8b1f6fd0aebe70c4b10ed 165 TIGRFAM TIGR02087 LEUD_arch: 3-isopropylmalate dehydratase, small subunit 3 156 3.4E-49 T 15-10-2018 IPR011827 Hydrolyase LeuD/HacB/DmdB GO:0016836 KEGG: 00290+4.2.1.33 Trad_1390 7b277fdb59a8b1f6fd0aebe70c4b10ed 165 SUPERFAMILY SSF52016 3 157 5.1E-40 T 15-10-2018 Trad_2403 28bdbc7363726b8cad7c88dee45a4663 111 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 11 93 1.5E-23 T 15-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 Trad_2403 28bdbc7363726b8cad7c88dee45a4663 111 SUPERFAMILY SSF46767 10 94 2.35E-20 T 15-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 Trad_2403 28bdbc7363726b8cad7c88dee45a4663 111 Gene3D G3DSA:1.10.10.10 8 110 4.4E-29 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Trad_2403 28bdbc7363726b8cad7c88dee45a4663 111 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 10 91 2.3E-14 T 15-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 Trad_1058 37885ff94e70b18d321df7cbcfaf453b 439 Pfam PF00344 SecY translocase 70 410 7.9E-109 T 15-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Trad_1058 37885ff94e70b18d321df7cbcfaf453b 439 Hamap MF_01465 Protein translocase subunit SecY [secY]. 5 427 28.6 T 15-10-2018 IPR026593 Protein translocase subunit SecY Trad_1058 37885ff94e70b18d321df7cbcfaf453b 439 PRINTS PR00303 Preprotein translocase SecY subunit signature 174 197 2.5E-81 T 15-10-2018 Trad_1058 37885ff94e70b18d321df7cbcfaf453b 439 PRINTS PR00303 Preprotein translocase SecY subunit signature 69 89 2.5E-81 T 15-10-2018 Trad_1058 37885ff94e70b18d321df7cbcfaf453b 439 PRINTS PR00303 Preprotein translocase SecY subunit signature 110 133 2.5E-81 T 15-10-2018 Trad_1058 37885ff94e70b18d321df7cbcfaf453b 439 PRINTS PR00303 Preprotein translocase SecY subunit signature 396 414 2.5E-81 T 15-10-2018 Trad_1058 37885ff94e70b18d321df7cbcfaf453b 439 PRINTS PR00303 Preprotein translocase SecY subunit signature 148 173 2.5E-81 T 15-10-2018 Trad_1058 37885ff94e70b18d321df7cbcfaf453b 439 PRINTS PR00303 Preprotein translocase SecY subunit signature 361 379 2.5E-81 T 15-10-2018 Trad_1058 37885ff94e70b18d321df7cbcfaf453b 439 PRINTS PR00303 Preprotein translocase SecY subunit signature 266 285 2.5E-81 T 15-10-2018 Trad_1058 37885ff94e70b18d321df7cbcfaf453b 439 PRINTS PR00303 Preprotein translocase SecY subunit signature 18 36 2.5E-81 T 15-10-2018 Trad_1058 37885ff94e70b18d321df7cbcfaf453b 439 PRINTS PR00303 Preprotein translocase SecY subunit signature 306 328 2.5E-81 T 15-10-2018 Trad_1058 37885ff94e70b18d321df7cbcfaf453b 439 Gene3D G3DSA:1.10.3370.10 1 423 8.7E-165 T 15-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Trad_1058 37885ff94e70b18d321df7cbcfaf453b 439 ProSitePatterns PS00755 Protein secY signature 1. 70 89 - T 15-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Trad_1058 37885ff94e70b18d321df7cbcfaf453b 439 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 15 422 1.5E-111 T 15-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Trad_1058 37885ff94e70b18d321df7cbcfaf453b 439 SUPERFAMILY SSF103491 2 418 1.44E-111 T 15-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Trad_1058 37885ff94e70b18d321df7cbcfaf453b 439 ProSitePatterns PS00756 Protein secY signature 2. 167 184 - T 15-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Trad_1058 37885ff94e70b18d321df7cbcfaf453b 439 PIRSF PIRSF004557 1 431 5.4E-116 T 15-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Trad_0667 d3f630b7d008f799e07030225ddb105e 328 SUPERFAMILY SSF51735 4 153 2.69E-47 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_0667 d3f630b7d008f799e07030225ddb105e 328 Gene3D G3DSA:3.30.360.10 133 326 2.7E-82 T 15-10-2018 Trad_0667 d3f630b7d008f799e07030225ddb105e 328 SUPERFAMILY SSF55347 131 283 2.13E-30 T 15-10-2018 Trad_0667 d3f630b7d008f799e07030225ddb105e 328 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 137 219 3.9E-11 T 15-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 Trad_0667 d3f630b7d008f799e07030225ddb105e 328 Gene3D G3DSA:3.40.50.720 9 308 2.7E-82 T 15-10-2018 Trad_0667 d3f630b7d008f799e07030225ddb105e 328 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 5 125 8.8E-26 T 15-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 Trad_1061 3569eee2bf0eab148ba6a3141ba600b0 95 Gene3D G3DSA:2.40.50.140 26 95 1.2E-30 T 15-10-2018 Trad_1061 3569eee2bf0eab148ba6a3141ba600b0 95 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 28 95 2.1E-28 T 15-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 Trad_1061 3569eee2bf0eab148ba6a3141ba600b0 95 Pfam PF01176 Translation initiation factor 1A / IF-1 33 94 5.2E-23 T 15-10-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 Trad_1061 3569eee2bf0eab148ba6a3141ba600b0 95 SUPERFAMILY SSF50249 4 94 6.21E-22 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold Trad_1061 3569eee2bf0eab148ba6a3141ba600b0 95 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 25 95 21.109 T 15-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 Trad_1853 ab035a2c4aec66684164d553d94ef1d8 377 SUPERFAMILY SSF53335 189 354 1.04E-31 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Trad_1853 ab035a2c4aec66684164d553d94ef1d8 377 Gene3D G3DSA:3.40.50.150 4 193 1.6E-30 T 15-10-2018 Trad_1853 ab035a2c4aec66684164d553d94ef1d8 377 Gene3D G3DSA:3.40.50.150 202 377 9.3E-46 T 15-10-2018 Trad_1853 ab035a2c4aec66684164d553d94ef1d8 377 Pfam PF05175 Methyltransferase small domain 210 358 9.3E-40 T 15-10-2018 IPR007848 Methyltransferase small domain GO:0008168 Trad_1853 ab035a2c4aec66684164d553d94ef1d8 377 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 308 314 - T 15-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Trad_1853 ab035a2c4aec66684164d553d94ef1d8 377 SUPERFAMILY SSF53335 33 192 5.81E-8 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Trad_0341 a1e7b23d276de9ccce8ff4e9be2df5a5 476 Gene3D G3DSA:1.10.10.410 409 471 4.3E-16 T 15-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal Trad_0341 a1e7b23d276de9ccce8ff4e9be2df5a5 476 SUPERFAMILY SSF89095 292 395 9.81E-23 T 15-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 Trad_0341 a1e7b23d276de9ccce8ff4e9be2df5a5 476 Pfam PF02637 GatB domain 323 468 6.0E-40 T 15-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 Trad_0341 a1e7b23d276de9ccce8ff4e9be2df5a5 476 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 140 154 - T 15-10-2018 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 Trad_0341 a1e7b23d276de9ccce8ff4e9be2df5a5 476 Pfam PF02934 GatB/GatE catalytic domain 5 283 9.6E-107 T 15-10-2018 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 Trad_0341 a1e7b23d276de9ccce8ff4e9be2df5a5 476 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 2 468 9.3E-156 T 15-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 Trad_0341 a1e7b23d276de9ccce8ff4e9be2df5a5 476 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 1 469 36.46 T 15-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 Trad_0341 a1e7b23d276de9ccce8ff4e9be2df5a5 476 SUPERFAMILY SSF55931 3 291 2.35E-108 T 15-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Trad_0341 a1e7b23d276de9ccce8ff4e9be2df5a5 476 SMART SM00845 322 468 7.1E-57 T 15-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 Trad_0341 a1e7b23d276de9ccce8ff4e9be2df5a5 476 Gene3D G3DSA:1.10.150.380 292 408 1.0E-24 T 15-10-2018 Trad_1165 ea0b678ce30ee07912f95b0235f264a7 437 ProSitePatterns PS00571 Amidases signature. 149 180 - T 15-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 Trad_1165 ea0b678ce30ee07912f95b0235f264a7 437 Gene3D G3DSA:3.90.1300.10 7 437 8.1E-120 T 15-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Trad_1165 ea0b678ce30ee07912f95b0235f264a7 437 SUPERFAMILY SSF75304 1 435 1.83E-112 T 15-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Trad_1165 ea0b678ce30ee07912f95b0235f264a7 437 Pfam PF01425 Amidase 24 428 1.7E-84 T 15-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Trad_2078 103b6bd4b67c4160a059430a19fa62b7 593 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 6 72 5.1E-11 T 15-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 Trad_2078 103b6bd4b67c4160a059430a19fa62b7 593 SUPERFAMILY SSF81296 3 102 4.0E-21 T 15-10-2018 IPR014756 Immunoglobulin E-set Trad_2078 103b6bd4b67c4160a059430a19fa62b7 593 Gene3D G3DSA:3.20.20.80 106 513 3.4E-166 T 15-10-2018 Trad_2078 103b6bd4b67c4160a059430a19fa62b7 593 Gene3D G3DSA:2.60.40.10 1 95 2.8E-24 T 15-10-2018 IPR013783 Immunoglobulin-like fold Trad_2078 103b6bd4b67c4160a059430a19fa62b7 593 TIGRFAM TIGR02402 trehalose_TreZ: malto-oligosyltrehalose trehalohydrolase 15 516 6.5E-198 T 15-10-2018 IPR012768 Malto-oligosyltrehalose trehalohydrolase GO:0004553|GO:0005992 KEGG: 00500+3.2.1.141|MetaCyc: PWY-2661 Trad_2078 103b6bd4b67c4160a059430a19fa62b7 593 Pfam PF00128 Alpha amylase, catalytic domain 135 211 5.4E-13 T 15-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Trad_2078 103b6bd4b67c4160a059430a19fa62b7 593 Gene3D G3DSA:1.10.10.760 446 485 3.4E-166 T 15-10-2018 Trad_2078 103b6bd4b67c4160a059430a19fa62b7 593 SMART SM00642 118 471 2.0E-8 T 15-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Trad_2078 103b6bd4b67c4160a059430a19fa62b7 593 PIRSF PIRSF006337 2 547 3.1E-203 T 15-10-2018 IPR012768 Malto-oligosyltrehalose trehalohydrolase GO:0004553|GO:0005992 KEGG: 00500+3.2.1.141|MetaCyc: PWY-2661 Trad_2078 103b6bd4b67c4160a059430a19fa62b7 593 SUPERFAMILY SSF51445 93 514 1.24E-108 T 15-10-2018 IPR017853 Glycoside hydrolase superfamily Trad_1864 e8450a83bbe06cfd3535bf2980dd5365 109 Pfam PF01909 Nucleotidyltransferase domain 23 57 1.4E-6 T 15-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 Trad_1864 e8450a83bbe06cfd3535bf2980dd5365 109 Gene3D G3DSA:3.30.460.10 9 107 1.0E-21 T 15-10-2018 Trad_1864 e8450a83bbe06cfd3535bf2980dd5365 109 SUPERFAMILY SSF81301 13 101 1.39E-14 T 15-10-2018 Trad_2278 13cd0c0bf03cdb528e927424b5f86ba9 463 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 242 256 - T 15-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 Trad_2278 13cd0c0bf03cdb528e927424b5f86ba9 463 SUPERFAMILY SSF53383 41 461 2.96E-103 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Trad_2278 13cd0c0bf03cdb528e927424b5f86ba9 463 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 43 461 4.2E-118 T 15-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 Trad_2278 13cd0c0bf03cdb528e927424b5f86ba9 463 PIRSF PIRSF001434 29 463 1.2E-117 T 15-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 Trad_2278 13cd0c0bf03cdb528e927424b5f86ba9 463 Gene3D G3DSA:3.40.640.10 40 327 1.1E-82 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Trad_2278 13cd0c0bf03cdb528e927424b5f86ba9 463 Gene3D G3DSA:3.90.1150.10 331 463 1.5E-46 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Trad_0763 311d612c3e155928d48a0b6fb0bb6a3a 409 PRINTS PR00812 Bacterial general secretion pathway protein F signature 168 196 4.9E-18 T 15-10-2018 IPR003004 GspF/PilC family Trad_0763 311d612c3e155928d48a0b6fb0bb6a3a 409 PRINTS PR00812 Bacterial general secretion pathway protein F signature 388 407 4.9E-18 T 15-10-2018 IPR003004 GspF/PilC family Trad_0763 311d612c3e155928d48a0b6fb0bb6a3a 409 PRINTS PR00812 Bacterial general secretion pathway protein F signature 372 386 4.9E-18 T 15-10-2018 IPR003004 GspF/PilC family Trad_0763 311d612c3e155928d48a0b6fb0bb6a3a 409 PRINTS PR00812 Bacterial general secretion pathway protein F signature 69 81 4.9E-18 T 15-10-2018 IPR003004 GspF/PilC family Trad_0763 311d612c3e155928d48a0b6fb0bb6a3a 409 Gene3D G3DSA:1.20.81.30 259 372 1.9E-25 T 15-10-2018 Trad_0763 311d612c3e155928d48a0b6fb0bb6a3a 409 Pfam PF00482 Type II secretion system (T2SS), protein F 73 196 3.9E-31 T 15-10-2018 IPR018076 Type II secretion system F domain Trad_0763 311d612c3e155928d48a0b6fb0bb6a3a 409 Pfam PF00482 Type II secretion system (T2SS), protein F 276 399 1.3E-25 T 15-10-2018 IPR018076 Type II secretion system F domain Trad_0763 311d612c3e155928d48a0b6fb0bb6a3a 409 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 168 196 - T 15-10-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 Trad_0763 311d612c3e155928d48a0b6fb0bb6a3a 409 Gene3D G3DSA:1.20.81.30 63 175 2.1E-31 T 15-10-2018 Trad_0386 03bb4cbc84bac02c96facb72efb838c6 1617 SUPERFAMILY SSF53223 772 949 7.39E-25 T 15-10-2018 Trad_0386 03bb4cbc84bac02c96facb72efb838c6 1617 SUPERFAMILY SSF51735 954 1227 5.18E-27 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_0386 03bb4cbc84bac02c96facb72efb838c6 1617 Pfam PF05088 Bacterial NAD-glutamate dehydrogenase 69 1604 0.0 T 15-10-2018 IPR028971 NAD-glutamate dehydrogenase GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 Trad_0386 03bb4cbc84bac02c96facb72efb838c6 1617 PIRSF PIRSF036761 3 1612 0.0 T 15-10-2018 IPR007780 NAD-glutamate dehydrogenase, bacteria GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 Trad_0060 86baabd0f4a45c54558bb9708ce3e30d 389 Pfam PF01266 FAD dependent oxidoreductase 12 358 4.5E-51 T 15-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 Trad_0060 86baabd0f4a45c54558bb9708ce3e30d 389 SUPERFAMILY SSF51905 11 378 9.93E-52 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Trad_0060 86baabd0f4a45c54558bb9708ce3e30d 389 Gene3D G3DSA:3.30.9.10 92 319 9.8E-86 T 15-10-2018 Trad_0060 86baabd0f4a45c54558bb9708ce3e30d 389 Gene3D G3DSA:3.50.50.60 12 358 9.8E-86 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Trad_2622 6ee09c5f6899f7e08cc71b5629d42db2 323 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 110 187 7.3E-30 T 15-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 Trad_2622 6ee09c5f6899f7e08cc71b5629d42db2 323 SUPERFAMILY SSF53901 8 322 8.39E-71 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 Trad_2622 6ee09c5f6899f7e08cc71b5629d42db2 323 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 5 323 66.691 T 15-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 Trad_2622 6ee09c5f6899f7e08cc71b5629d42db2 323 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 7 321 7.9E-121 T 15-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 Trad_2622 6ee09c5f6899f7e08cc71b5629d42db2 323 Gene3D G3DSA:3.40.47.10 3 323 2.2E-129 T 15-10-2018 IPR016039 Thiolase-like GO:0003824 Trad_2622 6ee09c5f6899f7e08cc71b5629d42db2 323 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 234 322 4.5E-34 T 15-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 Trad_0784 354c3884f01326dd0ea21c848b3d3a02 242 Hamap MF_00238 Cytidylate kinase [cmk]. 32 240 25.765 T 15-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 Trad_0784 354c3884f01326dd0ea21c848b3d3a02 242 TIGRFAM TIGR00017 cmk: cytidylate kinase 32 233 1.8E-50 T 15-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 Trad_0784 354c3884f01326dd0ea21c848b3d3a02 242 Gene3D G3DSA:3.40.50.300 31 236 1.1E-61 T 15-10-2018 Trad_0784 354c3884f01326dd0ea21c848b3d3a02 242 Pfam PF02224 Cytidylate kinase 34 234 3.1E-51 T 15-10-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 Trad_0784 354c3884f01326dd0ea21c848b3d3a02 242 SUPERFAMILY SSF52540 32 238 1.1E-29 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_0625 872501b6a774956ef8a89234640e8ff8 120 SUPERFAMILY SSF75169 1 113 1.97E-18 T 15-10-2018 IPR027396 DsrEFH-like Trad_1223 a11d3c716233eda3a33ebc082840391d 365 PIRSF PIRSF000112 1 359 1.5E-94 T 15-10-2018 IPR016205 Glycerol dehydrogenase GO:0016614|GO:0046872|GO:0055114 KEGG: 00564+1.1.1.261|MetaCyc: PWY-6349 Trad_1223 a11d3c716233eda3a33ebc082840391d 365 Gene3D G3DSA:3.40.50.1970 4 157 5.6E-42 T 15-10-2018 Trad_1223 a11d3c716233eda3a33ebc082840391d 365 SUPERFAMILY SSF56796 3 355 2.75E-87 T 15-10-2018 Trad_1223 a11d3c716233eda3a33ebc082840391d 365 Gene3D G3DSA:1.20.1090.10 159 364 7.9E-77 T 15-10-2018 Trad_1223 a11d3c716233eda3a33ebc082840391d 365 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 149 177 - T 15-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 Trad_1223 a11d3c716233eda3a33ebc082840391d 365 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 346 2.7E-70 T 15-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 Trad_1223 a11d3c716233eda3a33ebc082840391d 365 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 240 260 - T 15-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 Trad_2035 c4dee1df3f2b2bc92e52cd62fc9e98df 343 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 3 213 24.789 T 15-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 Trad_2035 c4dee1df3f2b2bc92e52cd62fc9e98df 343 SUPERFAMILY SSF53335 22 206 4.95E-22 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Trad_2035 c4dee1df3f2b2bc92e52cd62fc9e98df 343 Gene3D G3DSA:3.40.50.150 22 214 2.3E-45 T 15-10-2018 Trad_2035 c4dee1df3f2b2bc92e52cd62fc9e98df 343 Pfam PF02390 Putative methyltransferase 45 206 3.6E-35 T 15-10-2018 Trad_0033 cadd0437a3e89333ffe57a08a24fc7c6 554 Pfam PF13519 von Willebrand factor type A domain 86 173 2.8E-9 T 15-10-2018 IPR002035 von Willebrand factor, type A Trad_0033 cadd0437a3e89333ffe57a08a24fc7c6 554 Gene3D G3DSA:3.40.50.410 86 198 3.7E-11 T 15-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Trad_0033 cadd0437a3e89333ffe57a08a24fc7c6 554 Pfam PF07584 Aerotolerance regulator N-terminal 2 75 2.0E-14 T 15-10-2018 IPR024163 Aerotolerance regulator, N-terminal Trad_0033 cadd0437a3e89333ffe57a08a24fc7c6 554 SUPERFAMILY SSF53300 86 184 5.56E-7 T 15-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Trad_0033 cadd0437a3e89333ffe57a08a24fc7c6 554 TIGRFAM TIGR02226 two_anch: N-terminal double-transmembrane domain 1 77 2.6E-8 T 15-10-2018 IPR011933 Double transmembrane domain Trad_0965 48c1fd1757b0bdada2e7f40748ceced2 148 Gene3D G3DSA:3.10.180.10 8 146 1.0E-41 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Trad_0965 48c1fd1757b0bdada2e7f40748ceced2 148 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 4 136 1.3E-8 T 15-10-2018 IPR028973 PhnB-like Trad_0965 48c1fd1757b0bdada2e7f40748ceced2 148 SUPERFAMILY SSF54593 1 137 3.1E-33 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Trad_2963 b2839935fd80d30e546d60f9fd69ad9b 727 SUPERFAMILY SSF51735 435 722 1.21E-54 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_2963 b2839935fd80d30e546d60f9fd69ad9b 727 Gene3D G3DSA:3.40.50.720 422 722 8.3E-58 T 15-10-2018 Trad_2963 b2839935fd80d30e546d60f9fd69ad9b 727 SUPERFAMILY SSF53639 24 241 2.16E-29 T 15-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily Trad_2963 b2839935fd80d30e546d60f9fd69ad9b 727 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 608 627 3.9E-18 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2963 b2839935fd80d30e546d60f9fd69ad9b 727 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 445 462 3.9E-18 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2963 b2839935fd80d30e546d60f9fd69ad9b 727 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 582 598 3.9E-18 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2963 b2839935fd80d30e546d60f9fd69ad9b 727 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 628 645 3.9E-18 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2963 b2839935fd80d30e546d60f9fd69ad9b 727 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 533 544 3.9E-18 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2963 b2839935fd80d30e546d60f9fd69ad9b 727 Pfam PF00106 short chain dehydrogenase 445 640 1.3E-34 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2963 b2839935fd80d30e546d60f9fd69ad9b 727 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 26 231 2.2E-19 T 15-10-2018 IPR001303 Class II aldolase/adducin N-terminal Trad_2963 b2839935fd80d30e546d60f9fd69ad9b 727 Gene3D G3DSA:3.40.225.10 23 242 3.8E-52 T 15-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily Trad_2963 b2839935fd80d30e546d60f9fd69ad9b 727 TIGRFAM TIGR02632 RhaD_aldol-ADH: rhamnulose-1-phosphate aldolase/alcohol dehydrogenase 24 727 4.9E-293 T 15-10-2018 IPR013454 Bifunctional rhamnulose-1-phosphate aldolase/alcohol dehydrogenase Trad_2963 b2839935fd80d30e546d60f9fd69ad9b 727 SMART SM01007 26 235 7.7E-31 T 15-10-2018 IPR001303 Class II aldolase/adducin N-terminal Trad_1910 ffa60efb4003b687e17dff49f6be9ce1 283 Gene3D G3DSA:3.40.190.10 30 251 5.8E-67 T 15-10-2018 Trad_1910 ffa60efb4003b687e17dff49f6be9ce1 283 SUPERFAMILY SSF53850 24 278 5.14E-41 T 15-10-2018 Trad_1910 ffa60efb4003b687e17dff49f6be9ce1 283 Gene3D G3DSA:3.40.190.10 111 219 5.8E-67 T 15-10-2018 Trad_1910 ffa60efb4003b687e17dff49f6be9ce1 283 TIGRFAM TIGR01098 3A0109s03R: phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein 9 243 1.0E-68 T 15-10-2018 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein GO:0043190|GO:0055085 Trad_1910 ffa60efb4003b687e17dff49f6be9ce1 283 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 29 270 5.5E-71 T 15-10-2018 Trad_2565 9e0a2614e8837281e8fa98309a711b6e 298 Pfam PF02423 Ornithine cyclodeaminase/mu-crystallin family 62 288 4.5E-46 T 15-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 Trad_2565 9e0a2614e8837281e8fa98309a711b6e 298 SUPERFAMILY SSF51735 2 295 8.81E-56 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_2565 9e0a2614e8837281e8fa98309a711b6e 298 Gene3D G3DSA:3.30.1780.10 63 292 1.1E-57 T 15-10-2018 IPR023401 Ornithine cyclodeaminase, N-terminal Reactome: R-HSA-71064 Trad_2565 9e0a2614e8837281e8fa98309a711b6e 298 PIRSF PIRSF001439 59 297 2.5E-46 T 15-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 Trad_2565 9e0a2614e8837281e8fa98309a711b6e 298 Gene3D G3DSA:3.40.50.720 101 270 1.1E-57 T 15-10-2018 Trad_2274 b3b26c996d195753344b283449acb858 645 Gene3D G3DSA:1.50.10.10 259 642 4.6E-86 T 15-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 Trad_2274 b3b26c996d195753344b283449acb858 645 SUPERFAMILY SSF48208 233 628 1.6E-95 T 15-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 Trad_2274 b3b26c996d195753344b283449acb858 645 Pfam PF00723 Glycosyl hydrolases family 15 259 576 2.2E-43 T 15-10-2018 IPR011613 GH15-like domain Reactome: R-HSA-70221 Trad_2274 b3b26c996d195753344b283449acb858 645 Pfam PF00723 Glycosyl hydrolases family 15 582 627 2.7E-5 T 15-10-2018 IPR011613 GH15-like domain Reactome: R-HSA-70221 Trad_0325 5749a03786bf2a4c77898177f6197c48 395 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 2 385 5.2E-101 T 15-10-2018 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|MetaCyc: PWY-7851 Trad_0325 5749a03786bf2a4c77898177f6197c48 395 SUPERFAMILY SSF52507 2 172 2.75E-46 T 15-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 Trad_0325 5749a03786bf2a4c77898177f6197c48 395 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 179 361 2.1E-62 T 15-10-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 Trad_0325 5749a03786bf2a4c77898177f6197c48 395 Gene3D G3DSA:3.40.50.10300 177 391 5.1E-72 T 15-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 Trad_0325 5749a03786bf2a4c77898177f6197c48 395 Pfam PF02441 Flavoprotein 2 171 4.8E-37 T 15-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 Trad_0325 5749a03786bf2a4c77898177f6197c48 395 SUPERFAMILY SSF102645 177 390 7.98E-67 T 15-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 Trad_0325 5749a03786bf2a4c77898177f6197c48 395 Gene3D G3DSA:3.40.50.1950 1 175 1.7E-45 T 15-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 Trad_0276 495f74659b7a119ff319f0d2a6f4ce69 462 PRINTS PR00175 Sodium/alanine symporter signature 216 235 8.7E-46 T 15-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Trad_0276 495f74659b7a119ff319f0d2a6f4ce69 462 PRINTS PR00175 Sodium/alanine symporter signature 188 206 8.7E-46 T 15-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Trad_0276 495f74659b7a119ff319f0d2a6f4ce69 462 PRINTS PR00175 Sodium/alanine symporter signature 411 431 8.7E-46 T 15-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Trad_0276 495f74659b7a119ff319f0d2a6f4ce69 462 PRINTS PR00175 Sodium/alanine symporter signature 83 105 8.7E-46 T 15-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Trad_0276 495f74659b7a119ff319f0d2a6f4ce69 462 PRINTS PR00175 Sodium/alanine symporter signature 350 372 8.7E-46 T 15-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Trad_0276 495f74659b7a119ff319f0d2a6f4ce69 462 PRINTS PR00175 Sodium/alanine symporter signature 306 324 8.7E-46 T 15-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Trad_0276 495f74659b7a119ff319f0d2a6f4ce69 462 TIGRFAM TIGR00835 agcS: amino acid carrier protein 11 439 5.5E-119 T 15-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Trad_0276 495f74659b7a119ff319f0d2a6f4ce69 462 Pfam PF01235 Sodium:alanine symporter family 49 449 7.5E-127 T 15-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Trad_0135 50fb778ee38723b3e603bd4c7b3b5668 445 SUPERFAMILY SSF51905 153 317 6.94E-23 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Trad_0135 50fb778ee38723b3e603bd4c7b3b5668 445 Gene3D G3DSA:3.50.50.60 5 340 7.9E-150 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Trad_0135 50fb778ee38723b3e603bd4c7b3b5668 445 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 153 171 1.4E-24 T 15-10-2018 Trad_0135 50fb778ee38723b3e603bd4c7b3b5668 445 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 235 251 1.4E-24 T 15-10-2018 Trad_0135 50fb778ee38723b3e603bd4c7b3b5668 445 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 1.4E-24 T 15-10-2018 Trad_0135 50fb778ee38723b3e603bd4c7b3b5668 445 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 107 125 1.4E-24 T 15-10-2018 Trad_0135 50fb778ee38723b3e603bd4c7b3b5668 445 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 262 284 1.4E-24 T 15-10-2018 Trad_0135 50fb778ee38723b3e603bd4c7b3b5668 445 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 330 433 5.3E-12 T 15-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 Trad_0135 50fb778ee38723b3e603bd4c7b3b5668 445 Gene3D G3DSA:3.50.50.60 116 440 7.9E-150 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Trad_0135 50fb778ee38723b3e603bd4c7b3b5668 445 SUPERFAMILY SSF55424 323 444 8.25E-31 T 15-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Trad_0135 50fb778ee38723b3e603bd4c7b3b5668 445 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 304 6.5E-48 T 15-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Trad_0135 50fb778ee38723b3e603bd4c7b3b5668 445 SUPERFAMILY SSF51905 4 196 2.04E-39 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Trad_0135 50fb778ee38723b3e603bd4c7b3b5668 445 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 8.9E-18 T 15-10-2018 Trad_0135 50fb778ee38723b3e603bd4c7b3b5668 445 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 153 178 8.9E-18 T 15-10-2018 Trad_0135 50fb778ee38723b3e603bd4c7b3b5668 445 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 277 284 8.9E-18 T 15-10-2018 Trad_0135 50fb778ee38723b3e603bd4c7b3b5668 445 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 236 250 8.9E-18 T 15-10-2018 Trad_1033 bfe17674b1d4eab51a48515c26126da5 132 SUPERFAMILY SSF50249 5 131 3.08E-47 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold Trad_1033 bfe17674b1d4eab51a48515c26126da5 132 PRINTS PR01034 Ribosomal protein S12 signature 30 45 8.7E-46 T 15-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Trad_1033 bfe17674b1d4eab51a48515c26126da5 132 PRINTS PR01034 Ribosomal protein S12 signature 80 97 8.7E-46 T 15-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Trad_1033 bfe17674b1d4eab51a48515c26126da5 132 PRINTS PR01034 Ribosomal protein S12 signature 45 60 8.7E-46 T 15-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Trad_1033 bfe17674b1d4eab51a48515c26126da5 132 PRINTS PR01034 Ribosomal protein S12 signature 61 80 8.7E-46 T 15-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Trad_1033 bfe17674b1d4eab51a48515c26126da5 132 PRINTS PR01034 Ribosomal protein S12 signature 97 113 8.7E-46 T 15-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Trad_1033 bfe17674b1d4eab51a48515c26126da5 132 PIRSF PIRSF002133 4 132 3.2E-50 T 15-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Trad_1033 bfe17674b1d4eab51a48515c26126da5 132 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 4 131 36.479 T 15-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_1033 bfe17674b1d4eab51a48515c26126da5 132 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 5 132 2.6E-61 T 15-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_1033 bfe17674b1d4eab51a48515c26126da5 132 ProSitePatterns PS00055 Ribosomal protein S12 signature. 46 53 - T 15-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Trad_1033 bfe17674b1d4eab51a48515c26126da5 132 Gene3D G3DSA:2.40.50.140 1 132 1.7E-59 T 15-10-2018 Trad_1033 bfe17674b1d4eab51a48515c26126da5 132 Pfam PF00164 Ribosomal protein S12/S23 15 131 5.1E-40 T 15-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Trad_2780 8856fd23f8e153e90f20c08e759826fd 334 Pfam PF02628 Cytochrome oxidase assembly protein 9 293 5.3E-28 T 15-10-2018 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 Reactome: R-HSA-189451 Trad_2188 30ba305746b04e77bb04950fc33e09fe 477 SUPERFAMILY SSF51230 1 95 4.71E-24 T 15-10-2018 IPR011053 Single hybrid motif Trad_2188 30ba305746b04e77bb04950fc33e09fe 477 Pfam PF00364 Biotin-requiring enzyme 4 75 1.5E-19 T 15-10-2018 IPR000089 Biotin/lipoyl attachment Trad_2188 30ba305746b04e77bb04950fc33e09fe 477 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 245 473 2.7E-82 T 15-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 Trad_2188 30ba305746b04e77bb04950fc33e09fe 477 Gene3D G3DSA:3.30.559.10 228 474 1.6E-88 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 Trad_2188 30ba305746b04e77bb04950fc33e09fe 477 Pfam PF02817 e3 binding domain 175 209 1.3E-12 T 15-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 Trad_2188 30ba305746b04e77bb04950fc33e09fe 477 SUPERFAMILY SSF52777 232 473 4.89E-83 T 15-10-2018 Trad_2188 30ba305746b04e77bb04950fc33e09fe 477 SUPERFAMILY SSF47005 169 213 3.01E-10 T 15-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 Trad_2188 30ba305746b04e77bb04950fc33e09fe 477 Gene3D G3DSA:2.40.50.100 1 102 8.5E-23 T 15-10-2018 Trad_2188 30ba305746b04e77bb04950fc33e09fe 477 Gene3D G3DSA:4.10.320.10 165 216 1.1E-14 T 15-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 Trad_2188 30ba305746b04e77bb04950fc33e09fe 477 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 15-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 Trad_1491 6b7a01272765aac17c2b21575f2d5aba 508 Pfam PF07730 Histidine kinase 311 377 2.4E-18 T 15-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 Trad_1491 6b7a01272765aac17c2b21575f2d5aba 508 Pfam PF08448 PAS fold 26 129 2.0E-8 T 15-10-2018 IPR013656 PAS fold-4 Trad_1491 6b7a01272765aac17c2b21575f2d5aba 508 Gene3D G3DSA:3.30.450.20 13 128 5.9E-10 T 15-10-2018 Trad_1491 6b7a01272765aac17c2b21575f2d5aba 508 SMART SM00387 415 508 3.4E-12 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Trad_1491 6b7a01272765aac17c2b21575f2d5aba 508 SUPERFAMILY SSF55781 153 306 6.76E-13 T 15-10-2018 Trad_1491 6b7a01272765aac17c2b21575f2d5aba 508 SUPERFAMILY SSF55785 15 125 4.0E-11 T 15-10-2018 IPR035965 PAS domain superfamily Trad_1491 6b7a01272765aac17c2b21575f2d5aba 508 Gene3D G3DSA:3.30.565.10 376 508 1.4E-32 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Trad_1491 6b7a01272765aac17c2b21575f2d5aba 508 Gene3D G3DSA:3.30.450.40 129 308 2.8E-19 T 15-10-2018 IPR029016 GAF-like domain superfamily Trad_1491 6b7a01272765aac17c2b21575f2d5aba 508 SMART SM00091 15 81 4.7E-5 T 15-10-2018 IPR000014 PAS domain Trad_1491 6b7a01272765aac17c2b21575f2d5aba 508 SMART SM00065 149 304 0.0074 T 15-10-2018 IPR003018 GAF domain GO:0005515 Trad_1491 6b7a01272765aac17c2b21575f2d5aba 508 Pfam PF13185 GAF domain 149 295 6.3E-9 T 15-10-2018 IPR003018 GAF domain GO:0005515 Trad_1491 6b7a01272765aac17c2b21575f2d5aba 508 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 418 507 9.5E-9 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Trad_1491 6b7a01272765aac17c2b21575f2d5aba 508 PRINTS PR00344 Bacterial sensor protein C-terminal signature 492 505 6.2E-5 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Trad_1491 6b7a01272765aac17c2b21575f2d5aba 508 PRINTS PR00344 Bacterial sensor protein C-terminal signature 451 465 6.2E-5 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Trad_1491 6b7a01272765aac17c2b21575f2d5aba 508 PRINTS PR00344 Bacterial sensor protein C-terminal signature 468 486 6.2E-5 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Trad_1491 6b7a01272765aac17c2b21575f2d5aba 508 SUPERFAMILY SSF55874 386 506 3.41E-22 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Trad_0281 f729763773f332eef2bc4d6f8f3941d8 1069 Gene3D G3DSA:2.60.40.10 480 576 5.6E-9 T 15-10-2018 IPR013783 Immunoglobulin-like fold Trad_0281 f729763773f332eef2bc4d6f8f3941d8 1069 Pfam PF13620 Carboxypeptidase regulatory-like domain 742 835 9.5E-10 T 15-10-2018 Trad_0281 f729763773f332eef2bc4d6f8f3941d8 1069 SUPERFAMILY SSF49452 735 835 1.65E-10 T 15-10-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 Trad_0281 f729763773f332eef2bc4d6f8f3941d8 1069 Gene3D G3DSA:2.60.40.10 744 837 5.1E-9 T 15-10-2018 IPR013783 Immunoglobulin-like fold Trad_0281 f729763773f332eef2bc4d6f8f3941d8 1069 Pfam PF05569 BlaR1 peptidase M56 144 327 2.3E-29 T 15-10-2018 IPR008756 Peptidase M56 Trad_0138 d91101aa8297ce92b8b67e875145ade8 249 SUPERFAMILY SSF55961 105 242 1.69E-25 T 15-10-2018 Trad_0138 d91101aa8297ce92b8b67e875145ade8 249 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 112 233 2.2E-14 T 15-10-2018 IPR005031 Coenzyme Q-binding protein COQ10, START domain Reactome: R-HSA-611105 Trad_0138 d91101aa8297ce92b8b67e875145ade8 249 Gene3D G3DSA:3.30.530.20 103 246 3.8E-42 T 15-10-2018 IPR023393 START-like domain superfamily Trad_0551 64dad310ddeb006fca887df88a92ab63 250 SUPERFAMILY SSF56112 2 240 8.36E-54 T 15-10-2018 IPR011009 Protein kinase-like domain superfamily Trad_0551 64dad310ddeb006fca887df88a92ab63 250 PIRSF PIRSF000654 8 234 5.2E-20 T 15-10-2018 Trad_0551 64dad310ddeb006fca887df88a92ab63 250 SMART SM00220 2 246 1.2E-35 T 15-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Trad_0551 64dad310ddeb006fca887df88a92ab63 250 Gene3D G3DSA:3.30.200.20 2 70 4.3E-6 T 15-10-2018 Trad_0551 64dad310ddeb006fca887df88a92ab63 250 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 111 123 - T 15-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 Trad_0551 64dad310ddeb006fca887df88a92ab63 250 Pfam PF00069 Protein kinase domain 14 232 2.9E-34 T 15-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Trad_0551 64dad310ddeb006fca887df88a92ab63 250 Gene3D G3DSA:1.10.510.10 71 247 5.2E-42 T 15-10-2018 Trad_0692 f115d54f01528e1b035c9be196e13806 384 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 5 136 4.0E-19 T 15-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 Trad_0692 f115d54f01528e1b035c9be196e13806 384 Gene3D G3DSA:3.30.360.10 141 377 4.5E-131 T 15-10-2018 Trad_0692 f115d54f01528e1b035c9be196e13806 384 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 148 266 3.9E-5 T 15-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 Trad_0692 f115d54f01528e1b035c9be196e13806 384 SUPERFAMILY SSF55347 142 317 1.14E-38 T 15-10-2018 Trad_0692 f115d54f01528e1b035c9be196e13806 384 Gene3D G3DSA:3.40.50.720 9 352 4.5E-131 T 15-10-2018 Trad_0692 f115d54f01528e1b035c9be196e13806 384 SUPERFAMILY SSF51735 3 168 1.35E-37 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_0245 fe955c5341fc7c7c1c88fac13cb16a94 488 PIRSF PIRSF006247 2 474 2.3E-153 T 15-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 Trad_0245 fe955c5341fc7c7c1c88fac13cb16a94 488 Pfam PF02386 Cation transport protein 56 468 2.2E-51 T 15-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 Trad_1621 73e5dc88e936adad0bad85afdf0a9ddf 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 22.878 T 15-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_1621 73e5dc88e936adad0bad85afdf0a9ddf 89 SUPERFAMILY SSF47060 3 89 1.65E-34 T 15-10-2018 IPR009068 S15/NS1, RNA-binding Trad_1621 73e5dc88e936adad0bad85afdf0a9ddf 89 Pfam PF00312 Ribosomal protein S15 8 88 8.3E-36 T 15-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Trad_1621 73e5dc88e936adad0bad85afdf0a9ddf 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 10 88 3.0E-25 T 15-10-2018 Trad_1621 73e5dc88e936adad0bad85afdf0a9ddf 89 Gene3D G3DSA:1.10.287.10 1 89 7.2E-35 T 15-10-2018 Trad_1621 73e5dc88e936adad0bad85afdf0a9ddf 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 4 89 2.2E-38 T 15-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_1621 73e5dc88e936adad0bad85afdf0a9ddf 89 SMART SM01387 8 88 1.3E-49 T 15-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Trad_1621 73e5dc88e936adad0bad85afdf0a9ddf 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 15-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Trad_2865 a3527a7c4cdcc26a58cf47e051ff5525 303 SUPERFAMILY SSF53448 8 296 1.04E-88 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Trad_2865 a3527a7c4cdcc26a58cf47e051ff5525 303 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 9 296 2.8E-145 T 15-10-2018 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|KEGG: 00525+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 Trad_2865 a3527a7c4cdcc26a58cf47e051ff5525 303 Pfam PF00483 Nucleotidyl transferase 9 248 1.9E-67 T 15-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Trad_2865 a3527a7c4cdcc26a58cf47e051ff5525 303 Gene3D G3DSA:3.90.550.10 5 298 2.3E-82 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Trad_1920 cf8affff91a6a444c57e794bd085e77c 495 Pfam PF01554 MatE 25 183 2.4E-36 T 15-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Trad_1920 cf8affff91a6a444c57e794bd085e77c 495 Pfam PF01554 MatE 248 412 4.2E-28 T 15-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Trad_1920 cf8affff91a6a444c57e794bd085e77c 495 PIRSF PIRSF006603 10 457 1.8E-67 T 15-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Trad_1920 cf8affff91a6a444c57e794bd085e77c 495 TIGRFAM TIGR00797 matE: MATE efflux family protein 25 427 2.3E-88 T 15-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Trad_2041 9e1f38730f2be3659e56db30239634e6 430 SUPERFAMILY SSF161098 202 430 3.4E-49 T 15-10-2018 IPR035906 MetI-like superfamily Trad_2041 9e1f38730f2be3659e56db30239634e6 430 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 243 420 1.8E-15 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Trad_2283 9ce430e2f7d5b687ff05684605c08287 160 Pfam PF00583 Acetyltransferase (GNAT) family 49 143 2.4E-8 T 15-10-2018 IPR000182 GNAT domain Trad_2283 9ce430e2f7d5b687ff05684605c08287 160 SUPERFAMILY SSF55729 9 146 6.13E-19 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase Trad_2283 9ce430e2f7d5b687ff05684605c08287 160 Gene3D G3DSA:3.40.630.30 6 160 3.3E-30 T 15-10-2018 Trad_1972 defa0e50b0a249985639b5620e7508d8 200 Pfam PF09335 SNARE associated Golgi protein 39 159 1.8E-20 T 15-10-2018 IPR032816 SNARE associated Golgi protein Trad_0638 ab2a72e0e6ccc6a912d1dcaa5a3d2c42 605 Gene3D G3DSA:3.40.50.300 351 602 8.3E-95 T 15-10-2018 Trad_0638 ab2a72e0e6ccc6a912d1dcaa5a3d2c42 605 SUPERFAMILY SSF90123 18 348 9.68E-71 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Trad_0638 ab2a72e0e6ccc6a912d1dcaa5a3d2c42 605 SMART SM00382 383 569 3.4E-18 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_0638 ab2a72e0e6ccc6a912d1dcaa5a3d2c42 605 SUPERFAMILY SSF52540 350 593 5.94E-94 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_0638 ab2a72e0e6ccc6a912d1dcaa5a3d2c42 605 Pfam PF00005 ABC transporter 374 523 7.6E-38 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Trad_0638 ab2a72e0e6ccc6a912d1dcaa5a3d2c42 605 ProSitePatterns PS00211 ABC transporters family signature. 495 509 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Trad_0638 ab2a72e0e6ccc6a912d1dcaa5a3d2c42 605 Gene3D G3DSA:1.20.1560.10 11 341 1.0E-78 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Trad_0638 ab2a72e0e6ccc6a912d1dcaa5a3d2c42 605 Pfam PF00664 ABC transporter transmembrane region 31 305 8.9E-38 T 15-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Trad_1976 4989a1557a5c666501b632fd590371db 308 Gene3D G3DSA:1.10.3720.10 67 305 7.0E-71 T 15-10-2018 IPR035906 MetI-like superfamily Trad_1976 4989a1557a5c666501b632fd590371db 308 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 100 296 3.3E-18 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Trad_1976 4989a1557a5c666501b632fd590371db 308 SUPERFAMILY SSF161098 69 295 1.07E-61 T 15-10-2018 IPR035906 MetI-like superfamily Trad_1854 6c258752da2a4de9586b6a25b21cc4dd 348 Gene3D G3DSA:3.30.420.40 132 290 1.0E-111 T 15-10-2018 Trad_1854 6c258752da2a4de9586b6a25b21cc4dd 348 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 331 59.313 T 15-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 Trad_1854 6c258752da2a4de9586b6a25b21cc4dd 348 Gene3D G3DSA:3.30.420.40 3 312 1.0E-111 T 15-10-2018 Trad_1854 6c258752da2a4de9586b6a25b21cc4dd 348 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 4 303 3.3E-94 T 15-10-2018 IPR017861 Kae1/TsaD family Trad_1854 6c258752da2a4de9586b6a25b21cc4dd 348 SUPERFAMILY SSF53067 3 118 6.47E-28 T 15-10-2018 Trad_1854 6c258752da2a4de9586b6a25b21cc4dd 348 Pfam PF00814 Glycoprotease family 23 303 2.8E-90 T 15-10-2018 IPR000905 Gcp-like domain Trad_1854 6c258752da2a4de9586b6a25b21cc4dd 348 SUPERFAMILY SSF53067 100 305 1.29E-37 T 15-10-2018 Trad_1854 6c258752da2a4de9586b6a25b21cc4dd 348 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 310 6.9E-115 T 15-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 Trad_1854 6c258752da2a4de9586b6a25b21cc4dd 348 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 264 273 4.4E-41 T 15-10-2018 IPR017861 Kae1/TsaD family Trad_1854 6c258752da2a4de9586b6a25b21cc4dd 348 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 4.4E-41 T 15-10-2018 IPR017861 Kae1/TsaD family Trad_1854 6c258752da2a4de9586b6a25b21cc4dd 348 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 75 95 4.4E-41 T 15-10-2018 IPR017861 Kae1/TsaD family Trad_1854 6c258752da2a4de9586b6a25b21cc4dd 348 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 96 115 4.4E-41 T 15-10-2018 IPR017861 Kae1/TsaD family Trad_1854 6c258752da2a4de9586b6a25b21cc4dd 348 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 157 178 4.4E-41 T 15-10-2018 IPR017861 Kae1/TsaD family Trad_0283 18c135611a44bcef9b5d22e00ea40108 362 Gene3D G3DSA:3.80.30.30 142 362 3.2E-68 T 15-10-2018 Trad_0283 18c135611a44bcef9b5d22e00ea40108 362 Gene3D G3DSA:3.40.50.12110 26 139 2.2E-30 T 15-10-2018 Trad_0691 1650d6bbef586f42c00f6ab5f7e3620b 478 SMART SM00091 254 320 0.059 T 15-10-2018 IPR000014 PAS domain Trad_0691 1650d6bbef586f42c00f6ab5f7e3620b 478 SMART SM00091 130 197 0.011 T 15-10-2018 IPR000014 PAS domain Trad_0691 1650d6bbef586f42c00f6ab5f7e3620b 478 SMART SM00091 8 73 30.0 T 15-10-2018 IPR000014 PAS domain Trad_0691 1650d6bbef586f42c00f6ab5f7e3620b 478 Gene3D G3DSA:1.10.10.10 352 468 2.9E-31 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Trad_0691 1650d6bbef586f42c00f6ab5f7e3620b 478 Pfam PF13188 PAS domain 11 50 0.041 T 15-10-2018 IPR000014 PAS domain Trad_0691 1650d6bbef586f42c00f6ab5f7e3620b 478 SUPERFAMILY SSF46894 394 463 2.24E-20 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Trad_0691 1650d6bbef586f42c00f6ab5f7e3620b 478 Gene3D G3DSA:3.30.450.20 242 351 4.5E-14 T 15-10-2018 Trad_0691 1650d6bbef586f42c00f6ab5f7e3620b 478 Gene3D G3DSA:3.30.450.20 14 131 2.1E-6 T 15-10-2018 Trad_0691 1650d6bbef586f42c00f6ab5f7e3620b 478 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 127 248 1.6E-10 T 15-10-2018 IPR000014 PAS domain Trad_0691 1650d6bbef586f42c00f6ab5f7e3620b 478 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 250 361 5.3E-11 T 15-10-2018 IPR000014 PAS domain Trad_0691 1650d6bbef586f42c00f6ab5f7e3620b 478 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 416 432 3.9E-12 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Trad_0691 1650d6bbef586f42c00f6ab5f7e3620b 478 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 402 416 3.9E-12 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Trad_0691 1650d6bbef586f42c00f6ab5f7e3620b 478 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 432 444 3.9E-12 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Trad_0691 1650d6bbef586f42c00f6ab5f7e3620b 478 ProSitePatterns PS00622 LuxR-type HTH domain signature. 416 443 - T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Trad_0691 1650d6bbef586f42c00f6ab5f7e3620b 478 Gene3D G3DSA:3.30.450.20 132 236 2.8E-12 T 15-10-2018 Trad_0691 1650d6bbef586f42c00f6ab5f7e3620b 478 SUPERFAMILY SSF55785 242 352 5.23E-16 T 15-10-2018 IPR035965 PAS domain superfamily Trad_0691 1650d6bbef586f42c00f6ab5f7e3620b 478 Pfam PF00196 Bacterial regulatory proteins, luxR family 402 456 2.6E-19 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Trad_0691 1650d6bbef586f42c00f6ab5f7e3620b 478 SMART SM00421 399 456 2.1E-24 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Trad_0691 1650d6bbef586f42c00f6ab5f7e3620b 478 SUPERFAMILY SSF55785 9 123 2.27E-5 T 15-10-2018 IPR035965 PAS domain superfamily Trad_0691 1650d6bbef586f42c00f6ab5f7e3620b 478 SUPERFAMILY SSF55785 127 238 3.66E-12 T 15-10-2018 IPR035965 PAS domain superfamily Trad_0691 1650d6bbef586f42c00f6ab5f7e3620b 478 Pfam PF13426 PAS domain 271 352 7.8E-5 T 15-10-2018 IPR000014 PAS domain Trad_0691 1650d6bbef586f42c00f6ab5f7e3620b 478 Pfam PF13426 PAS domain 147 217 7.4E-7 T 15-10-2018 IPR000014 PAS domain Trad_2784 9672ad776ad791bd16f6787c9297cd4f 275 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 15-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 Trad_2784 9672ad776ad791bd16f6787c9297cd4f 275 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 228 41.14 T 15-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_2784 9672ad776ad791bd16f6787c9297cd4f 275 PRINTS PR00395 Ribosomal protein S2 signature 175 186 2.9E-39 T 15-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Trad_2784 9672ad776ad791bd16f6787c9297cd4f 275 PRINTS PR00395 Ribosomal protein S2 signature 6 24 2.9E-39 T 15-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Trad_2784 9672ad776ad791bd16f6787c9297cd4f 275 PRINTS PR00395 Ribosomal protein S2 signature 87 104 2.9E-39 T 15-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Trad_2784 9672ad776ad791bd16f6787c9297cd4f 275 PRINTS PR00395 Ribosomal protein S2 signature 196 210 2.9E-39 T 15-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Trad_2784 9672ad776ad791bd16f6787c9297cd4f 275 PRINTS PR00395 Ribosomal protein S2 signature 37 46 2.9E-39 T 15-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Trad_2784 9672ad776ad791bd16f6787c9297cd4f 275 PRINTS PR00395 Ribosomal protein S2 signature 158 175 2.9E-39 T 15-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Trad_2784 9672ad776ad791bd16f6787c9297cd4f 275 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 4 225 2.0E-99 T 15-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_2784 9672ad776ad791bd16f6787c9297cd4f 275 Gene3D G3DSA:1.10.287.610 97 152 7.4E-91 T 15-10-2018 Trad_2784 9672ad776ad791bd16f6787c9297cd4f 275 SUPERFAMILY SSF52313 6 230 6.54E-90 T 15-10-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily Trad_2784 9672ad776ad791bd16f6787c9297cd4f 275 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 158 182 - T 15-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 Trad_2784 9672ad776ad791bd16f6787c9297cd4f 275 Pfam PF00318 Ribosomal protein S2 9 223 3.0E-92 T 15-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Trad_2784 9672ad776ad791bd16f6787c9297cd4f 275 Gene3D G3DSA:3.40.50.10490 10 214 7.4E-91 T 15-10-2018 Trad_2475 30cfa1967fd66d1baf4185da6681277d 1526 Pfam PF04997 RNA polymerase Rpb1, domain 1 483 622 1.4E-43 T 15-10-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Trad_2475 30cfa1967fd66d1baf4185da6681277d 1526 Gene3D G3DSA:2.40.50.100 1271 1334 5.8E-69 T 15-10-2018 Trad_2475 30cfa1967fd66d1baf4185da6681277d 1526 Pfam PF04983 RNA polymerase Rpb1, domain 3 772 960 1.2E-19 T 15-10-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Trad_2475 30cfa1967fd66d1baf4185da6681277d 1526 Gene3D G3DSA:2.40.50.410 402 459 9.5E-21 T 15-10-2018 Trad_2475 30cfa1967fd66d1baf4185da6681277d 1526 Pfam PF00623 RNA polymerase Rpb1, domain 2 624 766 3.6E-35 T 15-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Trad_2475 30cfa1967fd66d1baf4185da6681277d 1526 Gene3D G3DSA:2.40.50.410 148 209 6.4E-18 T 15-10-2018 Trad_2475 30cfa1967fd66d1baf4185da6681277d 1526 SUPERFAMILY SSF64484 2 1482 0.0 T 15-10-2018 Trad_2475 30cfa1967fd66d1baf4185da6681277d 1526 Gene3D G3DSA:1.10.150.390 1435 1498 6.9E-28 T 15-10-2018 Trad_2475 30cfa1967fd66d1baf4185da6681277d 1526 Gene3D G3DSA:1.20.120.1280 1 128 1.0E-5 T 15-10-2018 Trad_2475 30cfa1967fd66d1baf4185da6681277d 1526 Gene3D G3DSA:1.10.274.100 772 956 1.1E-47 T 15-10-2018 Trad_2475 30cfa1967fd66d1baf4185da6681277d 1526 SMART SM00663 514 797 1.1E-154 T 15-10-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Trad_2475 30cfa1967fd66d1baf4185da6681277d 1526 Pfam PF05000 RNA polymerase Rpb1, domain 4 989 1055 5.6E-14 T 15-10-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Trad_2475 30cfa1967fd66d1baf4185da6681277d 1526 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 1 1496 17.707 T 15-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Trad_2475 30cfa1967fd66d1baf4185da6681277d 1526 Pfam PF04997 RNA polymerase Rpb1, domain 1 3 137 4.8E-33 T 15-10-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Trad_2475 30cfa1967fd66d1baf4185da6681277d 1526 Pfam PF04998 RNA polymerase Rpb1, domain 5 1070 1435 4.7E-56 T 15-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Trad_2475 30cfa1967fd66d1baf4185da6681277d 1526 Gene3D G3DSA:1.10.1790.20 1255 1433 5.8E-69 T 15-10-2018 Trad_2475 30cfa1967fd66d1baf4185da6681277d 1526 Gene3D G3DSA:1.10.40.90 653 700 4.8E-20 T 15-10-2018 Trad_2475 30cfa1967fd66d1baf4185da6681277d 1526 Gene3D G3DSA:1.10.132.30 957 1094 2.5E-60 T 15-10-2018 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Trad_1182 e93db29a95e911ff61db5560fa0254f0 333 SUPERFAMILY SSF52151 9 246 9.94E-53 T 15-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Trad_1182 e93db29a95e911ff61db5560fa0254f0 333 Gene3D G3DSA:3.40.1090.20 99 183 7.6E-8 T 15-10-2018 Trad_1182 e93db29a95e911ff61db5560fa0254f0 333 Pfam PF01734 Patatin-like phospholipase 14 168 2.8E-25 T 15-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 Trad_1182 e93db29a95e911ff61db5560fa0254f0 333 Gene3D G3DSA:3.40.1090.10 1 98 3.2E-28 T 15-10-2018 Trad_1640 74898779b0e816cbea663ca25e6e860a 260 Gene3D G3DSA:3.40.50.720 96 235 1.4E-14 T 15-10-2018 Trad_1640 74898779b0e816cbea663ca25e6e860a 260 Gene3D G3DSA:3.40.50.10860 21 246 1.4E-14 T 15-10-2018 Trad_1640 74898779b0e816cbea663ca25e6e860a 260 SUPERFAMILY SSF51735 98 248 3.28E-10 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_0885 63eccf6043c4078207f137e32370c324 251 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 144 172 - T 15-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Trad_0885 63eccf6043c4078207f137e32370c324 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 1.5E-11 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_0885 63eccf6043c4078207f137e32370c324 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 1.5E-11 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_0885 63eccf6043c4078207f137e32370c324 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 1.5E-11 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_0885 63eccf6043c4078207f137e32370c324 251 Gene3D G3DSA:3.40.50.720 1 251 4.1E-83 T 15-10-2018 Trad_0885 63eccf6043c4078207f137e32370c324 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 2.1E-46 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_0885 63eccf6043c4078207f137e32370c324 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 212 232 2.1E-46 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_0885 63eccf6043c4078207f137e32370c324 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 2.1E-46 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_0885 63eccf6043c4078207f137e32370c324 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 2.1E-46 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_0885 63eccf6043c4078207f137e32370c324 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 2.1E-46 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_0885 63eccf6043c4078207f137e32370c324 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 2.1E-46 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_0885 63eccf6043c4078207f137e32370c324 251 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 249 6.4E-71 T 15-10-2018 Trad_0885 63eccf6043c4078207f137e32370c324 251 SUPERFAMILY SSF51735 1 250 4.38E-83 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_2892 fe98f1c4b8d8ac1adf17171e6be80030 309 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 102 300 2.1E-10 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Trad_2892 fe98f1c4b8d8ac1adf17171e6be80030 309 SUPERFAMILY SSF161098 69 295 1.31E-52 T 15-10-2018 IPR035906 MetI-like superfamily Trad_2892 fe98f1c4b8d8ac1adf17171e6be80030 309 Gene3D G3DSA:1.10.3720.10 67 308 1.6E-58 T 15-10-2018 IPR035906 MetI-like superfamily Trad_1840 ad99c928b6efabb89068b6b8d05994d4 390 Pfam PF14583 Oligogalacturonate lyase 13 374 3.8E-38 T 15-10-2018 IPR027946 Oligogalacturonate lyase domain GO:0045490|GO:0047487 KEGG: 00040+4.2.2.6 Trad_1840 ad99c928b6efabb89068b6b8d05994d4 390 Gene3D G3DSA:2.130.10.10 2 383 1.5E-111 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Trad_1840 ad99c928b6efabb89068b6b8d05994d4 390 SUPERFAMILY SSF50969 24 260 5.26E-11 T 15-10-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like Trad_1241 d75d30408b89ff3789278de9e7192777 581 SUPERFAMILY SSF52091 449 560 1.28E-13 T 15-10-2018 IPR036513 STAS domain superfamily Trad_1241 d75d30408b89ff3789278de9e7192777 581 TIGRFAM TIGR00815 sulP: sulfate permease 15 553 7.6E-150 T 15-10-2018 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 Trad_1241 d75d30408b89ff3789278de9e7192777 581 ProSitePatterns PS01130 SLC26A transporters signature. 57 78 - T 15-10-2018 IPR018045 Sulphate anion transporter, conserved site GO:0008271|GO:0008272 Reactome: R-HSA-427601 Trad_1241 d75d30408b89ff3789278de9e7192777 581 Gene3D G3DSA:3.30.750.24 426 561 5.0E-25 T 15-10-2018 IPR036513 STAS domain superfamily Trad_1241 d75d30408b89ff3789278de9e7192777 581 Pfam PF01740 STAS domain 450 538 2.0E-13 T 15-10-2018 IPR002645 STAS domain Trad_1241 d75d30408b89ff3789278de9e7192777 581 Pfam PF00916 Sulfate permease family 28 396 5.2E-108 T 15-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 Trad_1511 c6d058a7874b0b90f93c1f2de49ae5c0 779 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 21 127 1.3E-21 T 15-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead Trad_1511 c6d058a7874b0b90f93c1f2de49ae5c0 779 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 150 696 3.5E-194 T 15-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 Trad_1511 c6d058a7874b0b90f93c1f2de49ae5c0 779 Gene3D G3DSA:3.30.365.10 2 774 1.7E-275 T 15-10-2018 Trad_1511 c6d058a7874b0b90f93c1f2de49ae5c0 779 SUPERFAMILY SSF56003 128 768 3.79E-192 T 15-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 Trad_1511 c6d058a7874b0b90f93c1f2de49ae5c0 779 SMART SM01008 21 128 3.5E-40 T 15-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead Trad_1511 c6d058a7874b0b90f93c1f2de49ae5c0 779 TIGRFAM TIGR02965 xanthine_xdhB: xanthine dehydrogenase, molybdopterin binding subunit 8 768 9.8E-288 T 15-10-2018 IPR014309 Xanthine dehydrogenase, molybdopterin binding subunit GO:0030151 KEGG: 00230+1.17.1.4+1.17.3.2|KEGG: 00232+1.17.3.2|KEGG: 00983+1.17.3.2|MetaCyc: PWY-5497|MetaCyc: PWY-5695|MetaCyc: PWY-6538|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-6999 Trad_1511 c6d058a7874b0b90f93c1f2de49ae5c0 779 SUPERFAMILY SSF54665 5 129 1.96E-37 T 15-10-2018 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily Trad_2013 69c355ad298aa56d59849cfd79ae169e 408 SUPERFAMILY SSF161098 193 375 5.23E-39 T 15-10-2018 IPR035906 MetI-like superfamily Trad_2013 69c355ad298aa56d59849cfd79ae169e 408 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 195 291 1.7E-18 T 15-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 Trad_2013 69c355ad298aa56d59849cfd79ae169e 408 Gene3D G3DSA:1.10.3720.10 189 404 1.5E-44 T 15-10-2018 IPR035906 MetI-like superfamily Trad_2013 69c355ad298aa56d59849cfd79ae169e 408 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 212 393 2.0E-18 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Trad_1326 9b8d534cbdf8c89982a2be08822f507f 145 Gene3D G3DSA:3.40.50.9100 1 143 1.6E-62 T 15-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Trad_1326 9b8d534cbdf8c89982a2be08822f507f 145 ProSitePatterns PS01029 Dehydroquinase class II signature. 5 22 - T 15-10-2018 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Trad_1326 9b8d534cbdf8c89982a2be08822f507f 145 PIRSF PIRSF001399 1 144 1.0E-57 T 15-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Trad_1326 9b8d534cbdf8c89982a2be08822f507f 145 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 145 65.652 T 15-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Trad_1326 9b8d534cbdf8c89982a2be08822f507f 145 Pfam PF01220 Dehydroquinase class II 2 138 5.5E-57 T 15-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Trad_1326 9b8d534cbdf8c89982a2be08822f507f 145 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 2 138 6.0E-48 T 15-10-2018 Trad_1326 9b8d534cbdf8c89982a2be08822f507f 145 SUPERFAMILY SSF52304 2 140 3.14E-58 T 15-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Trad_1326 9b8d534cbdf8c89982a2be08822f507f 145 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 2 139 2.8E-59 T 15-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Trad_0583 0b7173aed7123e3fa25580066af8bb84 450 Pfam PF01593 Flavin containing amine oxidoreductase 12 446 4.1E-51 T 15-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 Trad_0583 0b7173aed7123e3fa25580066af8bb84 450 SUPERFAMILY SSF51905 4 447 9.07E-51 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Trad_0583 0b7173aed7123e3fa25580066af8bb84 450 Gene3D G3DSA:1.10.3110.10 100 198 4.3E-137 T 15-10-2018 Trad_0583 0b7173aed7123e3fa25580066af8bb84 450 SUPERFAMILY SSF54373 290 398 2.55E-26 T 15-10-2018 Trad_0583 0b7173aed7123e3fa25580066af8bb84 450 Gene3D G3DSA:3.50.50.60 5 441 4.3E-137 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Trad_0583 0b7173aed7123e3fa25580066af8bb84 450 TIGRFAM TIGR00562 proto_IX_ox: protoporphyrinogen oxidase 2 447 2.0E-81 T 15-10-2018 IPR004572 Protoporphyrinogen oxidase GO:0004729|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.4|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Trad_0583 0b7173aed7123e3fa25580066af8bb84 450 Gene3D G3DSA:3.90.660.20 42 398 4.3E-137 T 15-10-2018 Trad_1899 c9c0777e307f23ee81b2d6eff7eeb9fc 179 SUPERFAMILY SSF55729 11 174 1.06E-33 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase Trad_1899 c9c0777e307f23ee81b2d6eff7eeb9fc 179 Pfam PF13420 Acetyltransferase (GNAT) domain 13 167 1.0E-13 T 15-10-2018 Trad_1899 c9c0777e307f23ee81b2d6eff7eeb9fc 179 Gene3D G3DSA:3.40.630.30 10 178 2.4E-44 T 15-10-2018 Trad_0433 2c2b3d77ceb7f3009710968e37d4f834 319 SUPERFAMILY SSF49344 9 216 3.69E-14 T 15-10-2018 Trad_0433 2c2b3d77ceb7f3009710968e37d4f834 319 Gene3D G3DSA:2.60.40.1190 7 229 1.6E-12 T 15-10-2018 Trad_0433 2c2b3d77ceb7f3009710968e37d4f834 319 Pfam PF09985 C-terminal binding-module, SLH-like, of glucodextranase 10 215 7.1E-12 T 15-10-2018 IPR019248 Glucodextranase-like, C-terminal Trad_0014 6738c0f6c285b45b8b151128154f3ce9 398 SUPERFAMILY SSF54534 209 305 4.91E-30 T 15-10-2018 Trad_0014 6738c0f6c285b45b8b151128154f3ce9 398 Gene3D G3DSA:3.10.50.40 213 304 3.4E-43 T 15-10-2018 Trad_0014 6738c0f6c285b45b8b151128154f3ce9 398 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 241 262 - T 15-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 Trad_0014 6738c0f6c285b45b8b151128154f3ce9 398 Pfam PF13616 PPIC-type PPIASE domain 213 303 5.6E-22 T 15-10-2018 Trad_0014 6738c0f6c285b45b8b151128154f3ce9 398 Gene3D G3DSA:1.10.4030.30 75 315 3.4E-43 T 15-10-2018 Trad_0014 6738c0f6c285b45b8b151128154f3ce9 398 Pfam PF13624 SurA N-terminal domain 54 181 4.5E-10 T 15-10-2018 Trad_0014 6738c0f6c285b45b8b151128154f3ce9 398 SUPERFAMILY SSF109998 64 241 1.09E-24 T 15-10-2018 IPR027304 Trigger factor/SurA domain superfamily Trad_1702 9cba55d78994b162a49acef8b1a3afb8 212 Gene3D G3DSA:3.90.45.10 1 208 1.2E-62 T 15-10-2018 IPR036821 Peptide deformylase superfamily Trad_1702 9cba55d78994b162a49acef8b1a3afb8 212 Pfam PF01327 Polypeptide deformylase 4 180 1.6E-45 T 15-10-2018 IPR023635 Peptide deformylase Trad_1702 9cba55d78994b162a49acef8b1a3afb8 212 SUPERFAMILY SSF56420 3 188 4.06E-52 T 15-10-2018 IPR036821 Peptide deformylase superfamily Trad_1702 9cba55d78994b162a49acef8b1a3afb8 212 PIRSF PIRSF004749 1 205 1.7E-47 T 15-10-2018 IPR023635 Peptide deformylase Trad_1702 9cba55d78994b162a49acef8b1a3afb8 212 Hamap MF_00163 Peptide deformylase [def]. 1 194 28.41 T 15-10-2018 IPR023635 Peptide deformylase Trad_1702 9cba55d78994b162a49acef8b1a3afb8 212 PRINTS PR01576 Peptide deformylase signature 32 61 7.1E-32 T 15-10-2018 IPR023635 Peptide deformylase Trad_1702 9cba55d78994b162a49acef8b1a3afb8 212 PRINTS PR01576 Peptide deformylase signature 129 147 7.1E-32 T 15-10-2018 IPR023635 Peptide deformylase Trad_1702 9cba55d78994b162a49acef8b1a3afb8 212 PRINTS PR01576 Peptide deformylase signature 116 127 7.1E-32 T 15-10-2018 IPR023635 Peptide deformylase Trad_1702 9cba55d78994b162a49acef8b1a3afb8 212 PRINTS PR01576 Peptide deformylase signature 148 177 7.1E-32 T 15-10-2018 IPR023635 Peptide deformylase Trad_0417 aff8752041261d0c2cd41fdd30e9ca9a 252 Pfam PF01578 Cytochrome C assembly protein 30 184 3.8E-14 T 15-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 Trad_0417 aff8752041261d0c2cd41fdd30e9ca9a 252 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 100 120 3.1E-15 T 15-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 Trad_0417 aff8752041261d0c2cd41fdd30e9ca9a 252 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 45 62 3.1E-15 T 15-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 Trad_0417 aff8752041261d0c2cd41fdd30e9ca9a 252 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 121 141 3.1E-15 T 15-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 Trad_0417 aff8752041261d0c2cd41fdd30e9ca9a 252 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 156 182 3.1E-15 T 15-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 Trad_0712 9c4f5000c3fe79e6658c79f613d94f7e 125 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 11 31 - T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site Trad_0712 9c4f5000c3fe79e6658c79f613d94f7e 125 SUPERFAMILY SSF54523 13 123 2.28E-18 T 15-10-2018 Trad_0712 9c4f5000c3fe79e6658c79f613d94f7e 125 Gene3D G3DSA:3.30.700.10 13 125 1.9E-21 T 15-10-2018 Trad_0712 9c4f5000c3fe79e6658c79f613d94f7e 125 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 11 32 1.2E-9 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site Trad_0712 9c4f5000c3fe79e6658c79f613d94f7e 125 Pfam PF07963 Prokaryotic N-terminal methylation motif 9 32 1.1E-9 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site Trad_2322 03044f6f46c604fb0149e09a6e9f3296 380 Gene3D G3DSA:1.20.140.10 235 380 2.7E-56 T 15-10-2018 Trad_2322 03044f6f46c604fb0149e09a6e9f3296 380 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 336 355 - T 15-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 Trad_2322 03044f6f46c604fb0149e09a6e9f3296 380 Gene3D G3DSA:1.10.540.10 1 119 3.8E-36 T 15-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 Trad_2322 03044f6f46c604fb0149e09a6e9f3296 380 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 124 136 - T 15-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 Trad_2322 03044f6f46c604fb0149e09a6e9f3296 380 SUPERFAMILY SSF56645 2 240 9.56E-75 T 15-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 Trad_2322 03044f6f46c604fb0149e09a6e9f3296 380 Gene3D G3DSA:2.40.110.10 121 234 8.8E-39 T 15-10-2018 Trad_2322 03044f6f46c604fb0149e09a6e9f3296 380 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 122 217 1.3E-23 T 15-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 Trad_2322 03044f6f46c604fb0149e09a6e9f3296 380 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 229 377 2.3E-50 T 15-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 Trad_2322 03044f6f46c604fb0149e09a6e9f3296 380 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 7 117 4.0E-27 T 15-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 Trad_2322 03044f6f46c604fb0149e09a6e9f3296 380 SUPERFAMILY SSF47203 227 379 6.6E-58 T 15-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 Trad_1383 0ed7a9d319f08e77921321e8df699e02 98 ProSitePatterns PS01319 Ribosome-binding factor A signature. 71 92 - T 15-10-2018 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 Trad_1383 0ed7a9d319f08e77921321e8df699e02 98 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 21 70 1.0E-5 T 15-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 Trad_1383 0ed7a9d319f08e77921321e8df699e02 98 Gene3D G3DSA:3.30.300.20 1 96 4.2E-22 T 15-10-2018 IPR015946 K homology domain-like, alpha/beta Trad_1383 0ed7a9d319f08e77921321e8df699e02 98 Pfam PF02033 Ribosome-binding factor A 5 93 1.5E-19 T 15-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 Trad_1383 0ed7a9d319f08e77921321e8df699e02 98 SUPERFAMILY SSF89919 5 93 9.55E-20 T 15-10-2018 IPR023799 Ribosome-binding factor A domain superfamily Trad_1383 0ed7a9d319f08e77921321e8df699e02 98 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 4 93 1.6E-15 T 15-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 Trad_1383 0ed7a9d319f08e77921321e8df699e02 98 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 2 97 19.427 T 15-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 Trad_1718 8747ecf7e7b80cd257afd6cace3d206d 505 PIRSF PIRSF002741 17 496 2.2E-106 T 15-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Trad_1718 8747ecf7e7b80cd257afd6cace3d206d 505 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 66 419 6.5E-88 T 15-10-2018 IPR000914 Solute-binding protein family 5 domain Trad_1718 8747ecf7e7b80cd257afd6cace3d206d 505 Gene3D G3DSA:3.90.76.10 32 178 1.6E-133 T 15-10-2018 Trad_1718 8747ecf7e7b80cd257afd6cace3d206d 505 Gene3D G3DSA:3.40.190.10 179 487 1.6E-133 T 15-10-2018 Trad_1718 8747ecf7e7b80cd257afd6cace3d206d 505 Gene3D G3DSA:3.10.105.10 253 480 1.6E-133 T 15-10-2018 Trad_1718 8747ecf7e7b80cd257afd6cace3d206d 505 SUPERFAMILY SSF53850 20 503 6.33E-130 T 15-10-2018 Trad_0977 f921162269b698d735c112feab9dff5d 414 SUPERFAMILY SSF55021 335 407 7.85E-19 T 15-10-2018 Trad_0977 f921162269b698d735c112feab9dff5d 414 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 64 405 1.4E-106 T 15-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Trad_0977 f921162269b698d735c112feab9dff5d 414 Gene3D G3DSA:3.40.1160.10 2 250 5.0E-87 T 15-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Trad_0977 f921162269b698d735c112feab9dff5d 414 PIRSF PIRSF000726 56 412 4.1E-114 T 15-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Trad_0977 f921162269b698d735c112feab9dff5d 414 PIRSF PIRSF000726 2 63 4.7E-18 T 15-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Trad_0977 f921162269b698d735c112feab9dff5d 414 Gene3D G3DSA:3.30.2130.10 251 413 7.2E-49 T 15-10-2018 Trad_0977 f921162269b698d735c112feab9dff5d 414 Pfam PF01842 ACT domain 271 327 2.7E-10 T 15-10-2018 IPR002912 ACT domain Trad_0977 f921162269b698d735c112feab9dff5d 414 Pfam PF13840 ACT domain 339 402 8.0E-9 T 15-10-2018 IPR027795 CASTOR, ACT domain Trad_0977 f921162269b698d735c112feab9dff5d 414 Pfam PF00696 Amino acid kinase family 3 231 6.7E-51 T 15-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 Trad_0977 f921162269b698d735c112feab9dff5d 414 SUPERFAMILY SSF53633 4 241 1.96E-72 T 15-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Trad_0977 f921162269b698d735c112feab9dff5d 414 ProSitePatterns PS00324 Aspartokinase signature. 6 14 - T 15-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Trad_0977 f921162269b698d735c112feab9dff5d 414 SUPERFAMILY SSF55021 253 330 2.52E-15 T 15-10-2018 Trad_0977 f921162269b698d735c112feab9dff5d 414 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 3 405 1.4E-121 T 15-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Trad_1749 7bbadc4f724a37d76881c3e03ddc1ebd 133 TIGRFAM TIGR01300 CPA3_mnhG_phaG: monovalent cation/proton antiporter, MnhG/PhaG subunit 10 94 4.6E-19 T 15-10-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:1902600 Trad_1749 7bbadc4f724a37d76881c3e03ddc1ebd 133 Pfam PF03334 Na+/H+ antiporter subunit 11 89 1.9E-24 T 15-10-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:1902600 Trad_0864 fb895bac096710123032e81b9277d76a 191 Pfam PF02545 Maf-like protein 6 182 2.6E-55 T 15-10-2018 IPR003697 Maf-like protein GO:0047429 Trad_0864 fb895bac096710123032e81b9277d76a 191 PIRSF PIRSF006305 1 191 2.0E-55 T 15-10-2018 IPR003697 Maf-like protein GO:0047429 Trad_0864 fb895bac096710123032e81b9277d76a 191 TIGRFAM TIGR00172 maf: septum formation protein Maf 4 179 1.5E-55 T 15-10-2018 IPR003697 Maf-like protein GO:0047429 Trad_0864 fb895bac096710123032e81b9277d76a 191 SUPERFAMILY SSF52972 3 181 2.22E-61 T 15-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like Trad_0864 fb895bac096710123032e81b9277d76a 191 Gene3D G3DSA:3.90.950.10 4 190 1.1E-68 T 15-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like Trad_0864 fb895bac096710123032e81b9277d76a 191 Hamap MF_00528 Septum formation protein Maf [maf]. 5 190 32.607 T 15-10-2018 IPR003697 Maf-like protein GO:0047429 Trad_2978 16408501d7088f472d03176d32917680 184 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 14 160 1.7E-31 T 15-10-2018 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Trad_2978 16408501d7088f472d03176d32917680 184 Gene3D G3DSA:1.20.120.1200 1 162 5.5E-41 T 15-10-2018 Trad_1685 a51bc46ce5597c4e026eb31964033d55 506 Pfam PF00361 Proton-conducting membrane transporter 129 425 3.4E-61 T 15-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Trad_1685 a51bc46ce5597c4e026eb31964033d55 506 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 78 103 1.5E-15 T 15-10-2018 Trad_1685 a51bc46ce5597c4e026eb31964033d55 506 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 220 241 1.5E-15 T 15-10-2018 Trad_1685 a51bc46ce5597c4e026eb31964033d55 506 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 242 268 1.5E-15 T 15-10-2018 Trad_1685 a51bc46ce5597c4e026eb31964033d55 506 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 106 126 1.5E-15 T 15-10-2018 Trad_0580 b375de6ff5d1bfb3a9a316554eea96df 400 ProSitePatterns PS00216 Sugar transport proteins signature 1. 68 85 - T 15-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 Trad_0580 b375de6ff5d1bfb3a9a316554eea96df 400 SUPERFAMILY SSF103473 14 388 9.55E-65 T 15-10-2018 IPR036259 MFS transporter superfamily Trad_0580 b375de6ff5d1bfb3a9a316554eea96df 400 Gene3D G3DSA:1.20.1250.20 12 212 7.8E-37 T 15-10-2018 Trad_0580 b375de6ff5d1bfb3a9a316554eea96df 400 Pfam PF07690 Major Facilitator Superfamily 245 397 3.4E-11 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Trad_0580 b375de6ff5d1bfb3a9a316554eea96df 400 Pfam PF07690 Major Facilitator Superfamily 19 240 9.9E-34 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Trad_0580 b375de6ff5d1bfb3a9a316554eea96df 400 Gene3D G3DSA:1.20.1250.20 213 394 6.4E-19 T 15-10-2018 Trad_2640 2603608781ad47f0c0da01eef476f2fc 290 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 125 133 1.1E-5 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2640 2603608781ad47f0c0da01eef476f2fc 290 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 1.1E-5 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2640 2603608781ad47f0c0da01eef476f2fc 290 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 74 85 1.1E-5 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2640 2603608781ad47f0c0da01eef476f2fc 290 Pfam PF00106 short chain dehydrogenase 1 194 1.7E-39 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2640 2603608781ad47f0c0da01eef476f2fc 290 Gene3D G3DSA:3.40.50.720 1 271 1.2E-78 T 15-10-2018 Trad_2640 2603608781ad47f0c0da01eef476f2fc 290 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 74 85 9.0E-17 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2640 2603608781ad47f0c0da01eef476f2fc 290 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 119 135 9.0E-17 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2640 2603608781ad47f0c0da01eef476f2fc 290 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 9.0E-17 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2640 2603608781ad47f0c0da01eef476f2fc 290 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 24 41 9.0E-17 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2640 2603608781ad47f0c0da01eef476f2fc 290 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 9.0E-17 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2640 2603608781ad47f0c0da01eef476f2fc 290 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 9.0E-17 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2640 2603608781ad47f0c0da01eef476f2fc 290 SUPERFAMILY SSF51735 1 247 8.36E-62 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_1615 59ebadc8f3c1e735772e8d18ab18ab83 666 SUPERFAMILY SSF53474 420 665 3.98E-54 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold Trad_1615 59ebadc8f3c1e735772e8d18ab18ab83 666 SUPERFAMILY SSF82171 14 397 9.16E-34 T 15-10-2018 Trad_1615 59ebadc8f3c1e735772e8d18ab18ab83 666 Gene3D G3DSA:3.40.50.1820 420 666 4.6E-64 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold Trad_1615 59ebadc8f3c1e735772e8d18ab18ab83 666 Gene3D G3DSA:2.120.10.30 167 308 1.4E-12 T 15-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like Trad_1615 59ebadc8f3c1e735772e8d18ab18ab83 666 Gene3D G3DSA:2.120.10.30 12 166 4.4E-17 T 15-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like Trad_1615 59ebadc8f3c1e735772e8d18ab18ab83 666 Pfam PF07676 WD40-like Beta Propeller Repeat 82 104 0.23 T 15-10-2018 IPR011659 WD40-like Beta Propeller Trad_1615 59ebadc8f3c1e735772e8d18ab18ab83 666 Pfam PF00326 Prolyl oligopeptidase family 458 664 1.3E-48 T 15-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 Trad_2339 4d40aa248fcc0033ca051d47f15a30a7 383 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 10 348 2.2E-148 T 15-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 Trad_2339 4d40aa248fcc0033ca051d47f15a30a7 383 SMART SM00382 127 252 8.0E-6 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_2339 4d40aa248fcc0033ca051d47f15a30a7 383 Gene3D G3DSA:3.30.450.90 2 105 3.1E-30 T 15-10-2018 Trad_2339 4d40aa248fcc0033ca051d47f15a30a7 383 SUPERFAMILY SSF52540 6 337 1.31E-70 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_2339 4d40aa248fcc0033ca051d47f15a30a7 383 Pfam PF00437 Type II/IV secretion system protein 39 274 2.1E-44 T 15-10-2018 IPR001482 Type II/IV secretion system protein Trad_2339 4d40aa248fcc0033ca051d47f15a30a7 383 Gene3D G3DSA:3.40.50.300 106 357 1.1E-101 T 15-10-2018 Trad_2339 4d40aa248fcc0033ca051d47f15a30a7 383 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 198 212 - T 15-10-2018 IPR001482 Type II/IV secretion system protein Trad_0346 4067894a170218db37b7bedf602c6ff7 412 Pfam PF03600 Citrate transporter 32 359 1.7E-36 T 15-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 Trad_0346 4067894a170218db37b7bedf602c6ff7 412 PRINTS PR00758 Arsenical pump membrane protein signature 181 204 6.3E-12 T 15-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 Trad_0346 4067894a170218db37b7bedf602c6ff7 412 PRINTS PR00758 Arsenical pump membrane protein signature 386 410 6.3E-12 T 15-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 Trad_0346 4067894a170218db37b7bedf602c6ff7 412 PRINTS PR00758 Arsenical pump membrane protein signature 108 132 6.3E-12 T 15-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 Trad_0346 4067894a170218db37b7bedf602c6ff7 412 PRINTS PR00758 Arsenical pump membrane protein signature 316 338 6.3E-12 T 15-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 Trad_1353 6d311ba990d31a0f7f2fbb3f083b481c 812 Gene3D G3DSA:3.30.56.10 46 209 7.6E-42 T 15-10-2018 Trad_1353 6d311ba990d31a0f7f2fbb3f083b481c 812 SUPERFAMILY SSF55681 503 705 7.46E-44 T 15-10-2018 Trad_1353 6d311ba990d31a0f7f2fbb3f083b481c 812 SUPERFAMILY SSF46955 440 511 1.01E-15 T 15-10-2018 IPR009061 Putative DNA-binding domain superfamily Trad_1353 6d311ba990d31a0f7f2fbb3f083b481c 812 Gene3D G3DSA:3.30.930.10 525 707 9.3E-48 T 15-10-2018 Trad_1353 6d311ba990d31a0f7f2fbb3f083b481c 812 Gene3D G3DSA:3.50.40.10 225 437 7.1E-74 T 15-10-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 Trad_1353 6d311ba990d31a0f7f2fbb3f083b481c 812 SMART SM00896 718 810 1.3E-31 T 15-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 Trad_1353 6d311ba990d31a0f7f2fbb3f083b481c 812 Pfam PF03484 tRNA synthetase B5 domain 443 507 1.2E-15 T 15-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 Trad_1353 6d311ba990d31a0f7f2fbb3f083b481c 812 SUPERFAMILY SSF56037 229 431 1.73E-61 T 15-10-2018 Trad_1353 6d311ba990d31a0f7f2fbb3f083b481c 812 Gene3D G3DSA:3.30.70.380 720 812 6.7E-24 T 15-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 Trad_1353 6d311ba990d31a0f7f2fbb3f083b481c 812 SUPERFAMILY SSF54991 714 805 7.06E-23 T 15-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 Trad_1353 6d311ba990d31a0f7f2fbb3f083b481c 812 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 43 805 3.6E-182 T 15-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 Trad_1353 6d311ba990d31a0f7f2fbb3f083b481c 812 Pfam PF03483 B3/4 domain 242 422 5.1E-55 T 15-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 Trad_1353 6d311ba990d31a0f7f2fbb3f083b481c 812 Pfam PF01588 Putative tRNA binding domain 74 174 1.9E-12 T 15-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 Trad_1353 6d311ba990d31a0f7f2fbb3f083b481c 812 Gene3D G3DSA:2.40.50.140 67 183 7.6E-42 T 15-10-2018 Trad_1353 6d311ba990d31a0f7f2fbb3f083b481c 812 SMART SM00873 242 423 6.0E-75 T 15-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 Trad_1353 6d311ba990d31a0f7f2fbb3f083b481c 812 SUPERFAMILY SSF50249 71 218 1.49E-26 T 15-10-2018 IPR012340 Nucleic acid-binding, OB-fold Trad_1353 6d311ba990d31a0f7f2fbb3f083b481c 812 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 805 36.577 T 15-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 Trad_1353 6d311ba990d31a0f7f2fbb3f083b481c 812 Gene3D G3DSA:3.30.56.10 439 512 8.9E-24 T 15-10-2018 Trad_1353 6d311ba990d31a0f7f2fbb3f083b481c 812 SMART SM00874 439 507 9.4E-21 T 15-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 Trad_1353 6d311ba990d31a0f7f2fbb3f083b481c 812 Pfam PF03147 Ferredoxin-fold anticodon binding domain 718 806 2.1E-21 T 15-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 Trad_1740 38ce9bde6bfd957bc5d36c1e05117199 252 Pfam PF00149 Calcineurin-like phosphoesterase 5 213 1.7E-10 T 15-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 Trad_1740 38ce9bde6bfd957bc5d36c1e05117199 252 Gene3D G3DSA:3.60.21.10 1 237 5.2E-19 T 15-10-2018 IPR029052 Metallo-dependent phosphatase-like Trad_1740 38ce9bde6bfd957bc5d36c1e05117199 252 SUPERFAMILY SSF56300 5 231 3.8E-23 T 15-10-2018 Trad_2442 08a15fb1d1efd516c65dfb38c45e14d5 322 Gene3D G3DSA:1.10.3720.10 64 318 4.7E-67 T 15-10-2018 IPR035906 MetI-like superfamily Trad_2442 08a15fb1d1efd516c65dfb38c45e14d5 322 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 104 315 3.1E-14 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Trad_2442 08a15fb1d1efd516c65dfb38c45e14d5 322 SUPERFAMILY SSF161098 68 307 1.44E-56 T 15-10-2018 IPR035906 MetI-like superfamily Trad_2032 77e652ee9045cf16136eeeceabc84b5a 128 Pfam PF07681 DoxX 7 80 4.3E-6 T 15-10-2018 IPR032808 DoxX family Trad_2541 17b27fb69067041ff7afe5dbe98fcbb6 138 TIGRFAM TIGR03562 osmo_induc_OsmC: peroxiredoxin, OsmC subfamily 5 135 3.9E-52 T 15-10-2018 IPR019904 Peroxiredoxin OsmC GO:0004601|GO:0006979 KEGG: 00480+1.11.1.15 Trad_2541 17b27fb69067041ff7afe5dbe98fcbb6 138 Gene3D G3DSA:3.30.300.20 3 138 3.8E-38 T 15-10-2018 IPR015946 K homology domain-like, alpha/beta Trad_2541 17b27fb69067041ff7afe5dbe98fcbb6 138 SUPERFAMILY SSF82784 5 128 9.16E-33 T 15-10-2018 IPR036102 OsmC/Ohr superfamily Trad_2541 17b27fb69067041ff7afe5dbe98fcbb6 138 Pfam PF02566 OsmC-like protein 41 133 9.4E-20 T 15-10-2018 IPR003718 OsmC/Ohr family Trad_1412 c7831f74c1fa1859ca4eb7bb00782b8a 175 SUPERFAMILY SSF54909 69 146 1.47E-15 T 15-10-2018 IPR011008 Dimeric alpha-beta barrel Trad_1412 c7831f74c1fa1859ca4eb7bb00782b8a 175 Gene3D G3DSA:1.10.10.10 3 55 4.5E-16 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Trad_1412 c7831f74c1fa1859ca4eb7bb00782b8a 175 SUPERFAMILY SSF46785 6 66 6.57E-10 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Trad_1412 c7831f74c1fa1859ca4eb7bb00782b8a 175 SMART SM00344 6 112 3.2E-17 T 15-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 Trad_1412 c7831f74c1fa1859ca4eb7bb00782b8a 175 Gene3D G3DSA:3.30.70.920 58 149 1.9E-17 T 15-10-2018 Trad_1412 c7831f74c1fa1859ca4eb7bb00782b8a 175 Pfam PF13404 AsnC-type helix-turn-helix domain 6 46 5.7E-14 T 15-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Trad_1412 c7831f74c1fa1859ca4eb7bb00782b8a 175 Pfam PF01037 Lrp/AsnC ligand binding domain 71 142 1.6E-14 T 15-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain Trad_1412 c7831f74c1fa1859ca4eb7bb00782b8a 175 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 22 33 1.8E-11 T 15-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Trad_1412 c7831f74c1fa1859ca4eb7bb00782b8a 175 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 6 22 1.8E-11 T 15-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Trad_1412 c7831f74c1fa1859ca4eb7bb00782b8a 175 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 33 52 1.8E-11 T 15-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Trad_2729 07f98a5d6775f24b1cc4ff7885ddfb03 558 Gene3D G3DSA:1.25.40.10 63 190 1.5E-21 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Trad_2729 07f98a5d6775f24b1cc4ff7885ddfb03 558 SUPERFAMILY SSF48452 418 546 3.19E-27 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Trad_2729 07f98a5d6775f24b1cc4ff7885ddfb03 558 Pfam PF13432 Tetratricopeptide repeat 127 183 6.7E-8 T 15-10-2018 Trad_2729 07f98a5d6775f24b1cc4ff7885ddfb03 558 Pfam PF13432 Tetratricopeptide repeat 381 447 0.014 T 15-10-2018 Trad_2729 07f98a5d6775f24b1cc4ff7885ddfb03 558 Pfam PF13432 Tetratricopeptide repeat 306 361 0.002 T 15-10-2018 Trad_2729 07f98a5d6775f24b1cc4ff7885ddfb03 558 Pfam PF13432 Tetratricopeptide repeat 199 253 0.0034 T 15-10-2018 Trad_2729 07f98a5d6775f24b1cc4ff7885ddfb03 558 SMART SM00028 448 481 0.16 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Trad_2729 07f98a5d6775f24b1cc4ff7885ddfb03 558 SMART SM00028 300 333 22.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Trad_2729 07f98a5d6775f24b1cc4ff7885ddfb03 558 SMART SM00028 260 293 49.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Trad_2729 07f98a5d6775f24b1cc4ff7885ddfb03 558 SMART SM00028 85 118 2.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Trad_2729 07f98a5d6775f24b1cc4ff7885ddfb03 558 SMART SM00028 193 226 9.8 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Trad_2729 07f98a5d6775f24b1cc4ff7885ddfb03 558 SMART SM00028 153 186 0.37 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Trad_2729 07f98a5d6775f24b1cc4ff7885ddfb03 558 SMART SM00028 119 152 0.03 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Trad_2729 07f98a5d6775f24b1cc4ff7885ddfb03 558 SMART SM00028 414 447 30.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Trad_2729 07f98a5d6775f24b1cc4ff7885ddfb03 558 SMART SM00028 377 410 38.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Trad_2729 07f98a5d6775f24b1cc4ff7885ddfb03 558 SMART SM00028 334 367 21.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Trad_2729 07f98a5d6775f24b1cc4ff7885ddfb03 558 SMART SM00028 482 515 0.6 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Trad_2729 07f98a5d6775f24b1cc4ff7885ddfb03 558 SMART SM00028 516 549 0.013 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Trad_2729 07f98a5d6775f24b1cc4ff7885ddfb03 558 SUPERFAMILY SSF48452 266 412 5.46E-16 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Trad_2729 07f98a5d6775f24b1cc4ff7885ddfb03 558 Gene3D G3DSA:1.25.40.10 263 405 1.4E-15 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Trad_2729 07f98a5d6775f24b1cc4ff7885ddfb03 558 Pfam PF13181 Tetratricopeptide repeat 86 115 0.0048 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Trad_2729 07f98a5d6775f24b1cc4ff7885ddfb03 558 Pfam PF00515 Tetratricopeptide repeat 516 545 1.1E-6 T 15-10-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 Trad_2729 07f98a5d6775f24b1cc4ff7885ddfb03 558 Gene3D G3DSA:1.25.40.10 406 556 2.0E-29 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Trad_2729 07f98a5d6775f24b1cc4ff7885ddfb03 558 Pfam PF13414 TPR repeat 455 496 5.0E-13 T 15-10-2018 Trad_2729 07f98a5d6775f24b1cc4ff7885ddfb03 558 SUPERFAMILY SSF48452 69 251 2.52E-25 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Trad_2729 07f98a5d6775f24b1cc4ff7885ddfb03 558 Gene3D G3DSA:1.25.40.10 191 262 1.4E-7 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Trad_1783 16e6ae0014893e3ee6f0605c528ec24b 240 SUPERFAMILY SSF51735 2 224 1.99E-36 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_1783 16e6ae0014893e3ee6f0605c528ec24b 240 Gene3D G3DSA:3.40.50.720 2 226 8.3E-35 T 15-10-2018 Trad_1783 16e6ae0014893e3ee6f0605c528ec24b 240 Pfam PF00106 short chain dehydrogenase 7 195 1.0E-27 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_1783 16e6ae0014893e3ee6f0605c528ec24b 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 8.8E-6 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_1783 16e6ae0014893e3ee6f0605c528ec24b 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 8.8E-6 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_1783 16e6ae0014893e3ee6f0605c528ec24b 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 8.8E-6 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2258 08c6a6a14d36a235fe5c9f13fad93e67 191 Pfam PF07615 YKOF-related Family 3 80 2.4E-20 T 15-10-2018 IPR011522 Thiamin/hydroxymethyl pyrimidine-binding YkoF, putative Trad_2258 08c6a6a14d36a235fe5c9f13fad93e67 191 Pfam PF07615 YKOF-related Family 106 186 3.0E-23 T 15-10-2018 IPR011522 Thiamin/hydroxymethyl pyrimidine-binding YkoF, putative Trad_2258 08c6a6a14d36a235fe5c9f13fad93e67 191 Gene3D G3DSA:3.30.70.930 1 78 1.0E-23 T 15-10-2018 IPR029756 MTH1187/YkoF-like Trad_2258 08c6a6a14d36a235fe5c9f13fad93e67 191 SUPERFAMILY SSF89957 3 185 6.78E-37 T 15-10-2018 IPR029756 MTH1187/YkoF-like Trad_2258 08c6a6a14d36a235fe5c9f13fad93e67 191 Gene3D G3DSA:3.30.70.930 103 190 5.7E-30 T 15-10-2018 IPR029756 MTH1187/YkoF-like Trad_1295 2d13a4205eb4020cbf1a0c21791a1ceb 456 Pfam PF01565 FAD binding domain 35 172 1.0E-41 T 15-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 Trad_1295 2d13a4205eb4020cbf1a0c21791a1ceb 456 Gene3D G3DSA:3.30.70.2740 327 409 1.8E-12 T 15-10-2018 Trad_1295 2d13a4205eb4020cbf1a0c21791a1ceb 456 SUPERFAMILY SSF55103 213 450 1.46E-65 T 15-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 Trad_1295 2d13a4205eb4020cbf1a0c21791a1ceb 456 Gene3D G3DSA:3.30.465.40 1 224 1.8E-74 T 15-10-2018 Trad_1295 2d13a4205eb4020cbf1a0c21791a1ceb 456 SUPERFAMILY SSF56176 2 209 1.64E-67 T 15-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Trad_1295 2d13a4205eb4020cbf1a0c21791a1ceb 456 Pfam PF02913 FAD linked oxidases, C-terminal domain 209 447 7.0E-61 T 15-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 Trad_1295 2d13a4205eb4020cbf1a0c21791a1ceb 456 Gene3D G3DSA:1.10.45.10 410 449 1.6E-12 T 15-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 Trad_2543 7f059f959e276c446e2a6e69a8e08def 682 SUPERFAMILY SSF46600 613 655 3.4E-9 T 15-10-2018 IPR036876 UVR domain superfamily Trad_2543 7f059f959e276c446e2a6e69a8e08def 682 SMART SM00490 456 542 8.0E-17 T 15-10-2018 IPR001650 Helicase, C-terminal Trad_2543 7f059f959e276c446e2a6e69a8e08def 682 Pfam PF00271 Helicase conserved C-terminal domain 437 540 8.8E-18 T 15-10-2018 IPR001650 Helicase, C-terminal Trad_2543 7f059f959e276c446e2a6e69a8e08def 682 Gene3D G3DSA:3.40.50.300 1 241 3.5E-70 T 15-10-2018 Trad_2543 7f059f959e276c446e2a6e69a8e08def 682 SUPERFAMILY SSF52540 4 411 1.14E-124 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_2543 7f059f959e276c446e2a6e69a8e08def 682 Gene3D G3DSA:3.40.50.300 243 410 1.8E-53 T 15-10-2018 Trad_2543 7f059f959e276c446e2a6e69a8e08def 682 Pfam PF04851 Type III restriction enzyme, res subunit 9 90 9.3E-11 T 15-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 Trad_2543 7f059f959e276c446e2a6e69a8e08def 682 SUPERFAMILY SSF52540 35 578 9.29E-35 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_2543 7f059f959e276c446e2a6e69a8e08def 682 Hamap MF_00204 UvrABC system protein B [uvrB]. 1 654 41.877 T 15-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 Trad_2543 7f059f959e276c446e2a6e69a8e08def 682 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 4 651 0.0 T 15-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 Trad_2543 7f059f959e276c446e2a6e69a8e08def 682 Pfam PF02151 UvrB/uvrC motif 619 653 2.8E-7 T 15-10-2018 IPR001943 UVR domain GO:0005515 Trad_2543 7f059f959e276c446e2a6e69a8e08def 682 Pfam PF12344 Ultra-violet resistance protein B 548 590 9.9E-20 T 15-10-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain Trad_2543 7f059f959e276c446e2a6e69a8e08def 682 Gene3D G3DSA:3.40.50.300 411 592 7.5E-49 T 15-10-2018 Trad_2543 7f059f959e276c446e2a6e69a8e08def 682 SMART SM00487 7 422 1.2E-23 T 15-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Trad_2066 56977359e827f08cc3e0ba9776e00345 236 SMART SM00862 160 230 4.9E-28 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Trad_2066 56977359e827f08cc3e0ba9776e00345 236 SUPERFAMILY SSF52172 12 194 8.82E-40 T 15-10-2018 IPR011006 CheY-like superfamily Trad_2066 56977359e827f08cc3e0ba9776e00345 236 SMART SM00448 14 128 2.2E-40 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Trad_2066 56977359e827f08cc3e0ba9776e00345 236 Gene3D G3DSA:3.40.50.2300 5 137 7.4E-35 T 15-10-2018 Trad_2066 56977359e827f08cc3e0ba9776e00345 236 Pfam PF00486 Transcriptional regulatory protein, C terminal 162 230 2.7E-23 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Trad_2066 56977359e827f08cc3e0ba9776e00345 236 Pfam PF00072 Response regulator receiver domain 17 129 1.7E-25 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Trad_2066 56977359e827f08cc3e0ba9776e00345 236 Gene3D G3DSA:1.10.10.10 138 235 7.0E-30 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Trad_1508 390c3df53c52a113acf1af7fb8fb170c 239 Pfam PF01844 HNH endonuclease 164 220 7.3E-5 T 15-10-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 Trad_2119 e84bdae56393df46bb0a679b84ba9b5b 187 Pfam PF09348 Domain of unknown function (DUF1990) 29 181 5.5E-40 T 15-10-2018 IPR018960 Domain of unknown function DUF1990 Trad_2022 3f3cc43583a6c2d70216e080bb7f824c 103 Gene3D G3DSA:1.20.120.610 4 101 2.4E-13 T 15-10-2018 Trad_2022 3f3cc43583a6c2d70216e080bb7f824c 103 Pfam PF00137 ATP synthase subunit C 39 98 1.4E-14 T 15-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 Trad_2022 3f3cc43583a6c2d70216e080bb7f824c 103 SUPERFAMILY SSF81333 34 99 3.79E-12 T 15-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily Trad_1730 588ac497d65102b60b6ad812fc70e5aa 285 SUPERFAMILY SSF161098 50 276 1.05E-62 T 15-10-2018 IPR035906 MetI-like superfamily Trad_1730 588ac497d65102b60b6ad812fc70e5aa 285 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 97 277 9.4E-17 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Trad_1730 588ac497d65102b60b6ad812fc70e5aa 285 Gene3D G3DSA:1.10.3720.10 49 283 2.2E-70 T 15-10-2018 IPR035906 MetI-like superfamily Trad_0439 13a95ddf53d772ad3a66df24a193db1c 363 Pfam PF00155 Aminotransferase class I and II 22 337 1.7E-46 T 15-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Trad_0439 13a95ddf53d772ad3a66df24a193db1c 363 SUPERFAMILY SSF53383 15 343 9.28E-69 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Trad_0439 13a95ddf53d772ad3a66df24a193db1c 363 Gene3D G3DSA:3.90.1150.10 8 342 1.1E-96 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Trad_0439 13a95ddf53d772ad3a66df24a193db1c 363 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 206 215 - T 15-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 Trad_0439 13a95ddf53d772ad3a66df24a193db1c 363 Gene3D G3DSA:3.40.640.10 44 256 1.1E-96 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Trad_0439 13a95ddf53d772ad3a66df24a193db1c 363 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 6 344 1.0E-84 T 15-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 Trad_0439 13a95ddf53d772ad3a66df24a193db1c 363 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 2 347 49.379 T 15-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 Trad_1969 a369ffae80ce557f94127f1d2e3fb439 307 Gene3D G3DSA:1.10.1040.10 166 297 7.9E-47 T 15-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 Trad_1969 a369ffae80ce557f94127f1d2e3fb439 307 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 167 278 7.4E-21 T 15-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Trad_1969 a369ffae80ce557f94127f1d2e3fb439 307 TIGRFAM TIGR00872 gnd_rel: 6-phosphogluconate dehydrogenase (decarboxylating) 1 296 4.0E-103 T 15-10-2018 IPR004849 6-phosphogluconate dehydrogenase, YqeC-type GO:0055114 Trad_1969 a369ffae80ce557f94127f1d2e3fb439 307 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 1 24 2.4E-22 T 15-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Trad_1969 a369ffae80ce557f94127f1d2e3fb439 307 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 232 259 2.4E-22 T 15-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Trad_1969 a369ffae80ce557f94127f1d2e3fb439 307 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 59 88 2.4E-22 T 15-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Trad_1969 a369ffae80ce557f94127f1d2e3fb439 307 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 156 184 2.4E-22 T 15-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Trad_1969 a369ffae80ce557f94127f1d2e3fb439 307 SMART SM01350 167 302 8.6E-5 T 15-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Trad_1969 a369ffae80ce557f94127f1d2e3fb439 307 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 5 18 - T 15-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 Trad_1969 a369ffae80ce557f94127f1d2e3fb439 307 SUPERFAMILY SSF51735 1 155 3.57E-44 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_1969 a369ffae80ce557f94127f1d2e3fb439 307 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 3 154 4.6E-41 T 15-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 Trad_1969 a369ffae80ce557f94127f1d2e3fb439 307 SUPERFAMILY SSF48179 165 301 8.84E-38 T 15-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Trad_1969 a369ffae80ce557f94127f1d2e3fb439 307 Gene3D G3DSA:3.40.50.720 1 165 8.2E-51 T 15-10-2018 Trad_2604 e3a0915315855a241505ef4c444809a5 363 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 24 196 5.9E-46 T 15-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 Trad_2604 e3a0915315855a241505ef4c444809a5 363 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 202 346 6.2E-32 T 15-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 Trad_2604 e3a0915315855a241505ef4c444809a5 363 Gene3D G3DSA:3.30.2340.10 181 311 7.6E-88 T 15-10-2018 Trad_2604 e3a0915315855a241505ef4c444809a5 363 Hamap MF_01082 tRNA pseudouridine synthase D [truD]. 19 351 26.199 T 15-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 Trad_2604 e3a0915315855a241505ef4c444809a5 363 ProSitePatterns PS01268 Uncharacterized protein family UPF0024 signature. 90 103 - T 15-10-2018 IPR020119 Pseudouridine synthase TruD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Reactome: R-HSA-6782315 Trad_2604 e3a0915315855a241505ef4c444809a5 363 SUPERFAMILY SSF55120 23 349 1.06E-83 T 15-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Trad_2604 e3a0915315855a241505ef4c444809a5 363 Gene3D G3DSA:3.30.2350.20 32 346 7.6E-88 T 15-10-2018 Trad_0856 9204eb19b7ec1f6045b91df64a00e36e 88 Gene3D G3DSA:2.30.170.40 42 72 2.2E-8 T 15-10-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_0856 9204eb19b7ec1f6045b91df64a00e36e 88 Pfam PF00830 Ribosomal L28 family 3 71 6.3E-11 T 15-10-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_0856 9204eb19b7ec1f6045b91df64a00e36e 88 SUPERFAMILY SSF143800 1 72 3.14E-13 T 15-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_0856 9204eb19b7ec1f6045b91df64a00e36e 88 Gene3D G3DSA:2.20.150.30 1 41 1.1E-11 T 15-10-2018 Trad_2584 3a2357a6e3e7c0a428ac1f7f12096225 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 1.9E-33 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2584 3a2357a6e3e7c0a428ac1f7f12096225 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 210 230 1.9E-33 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2584 3a2357a6e3e7c0a428ac1f7f12096225 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 1.9E-33 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2584 3a2357a6e3e7c0a428ac1f7f12096225 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 1.9E-33 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2584 3a2357a6e3e7c0a428ac1f7f12096225 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 1.9E-33 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2584 3a2357a6e3e7c0a428ac1f7f12096225 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 14 31 1.9E-33 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2584 3a2357a6e3e7c0a428ac1f7f12096225 257 Gene3D G3DSA:3.40.50.720 3 253 2.2E-68 T 15-10-2018 Trad_2584 3a2357a6e3e7c0a428ac1f7f12096225 257 SUPERFAMILY SSF51735 8 249 5.29E-71 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_2584 3a2357a6e3e7c0a428ac1f7f12096225 257 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 19 247 1.8E-57 T 15-10-2018 Trad_2584 3a2357a6e3e7c0a428ac1f7f12096225 257 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 15-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Trad_0708 4a06ef8b338b2474bd4b9096f0c27dbc 116 SUPERFAMILY SSF140663 4 108 3.01E-24 T 15-10-2018 IPR023203 TTHA0068-like superfamily Trad_0708 4a06ef8b338b2474bd4b9096f0c27dbc 116 Pfam PF03745 Domain of unknown function (DUF309) 5 62 1.7E-16 T 15-10-2018 IPR005500 Protein of unknown function DUF309 Trad_0708 4a06ef8b338b2474bd4b9096f0c27dbc 116 Gene3D G3DSA:1.20.58.500 1 96 7.6E-25 T 15-10-2018 Trad_2862 18e278c9c3d78ee8c28274f31a909238 381 Gene3D G3DSA:3.40.50.2000 185 352 6.6E-32 T 15-10-2018 Trad_2862 18e278c9c3d78ee8c28274f31a909238 381 Pfam PF13439 Glycosyltransferase Family 4 21 197 2.6E-8 T 15-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Trad_2862 18e278c9c3d78ee8c28274f31a909238 381 SUPERFAMILY SSF53756 8 364 5.71E-59 T 15-10-2018 Trad_2862 18e278c9c3d78ee8c28274f31a909238 381 Pfam PF00534 Glycosyl transferases group 1 202 355 5.5E-25 T 15-10-2018 IPR001296 Glycosyl transferase, family 1 Trad_2783 eea57e8ea8763524c5c0adbc0712b381 357 SUPERFAMILY SSF48452 277 352 6.64E-7 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Trad_2783 eea57e8ea8763524c5c0adbc0712b381 357 SMART SM00028 170 203 0.0015 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Trad_2783 eea57e8ea8763524c5c0adbc0712b381 357 SMART SM00028 308 349 11.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Trad_2783 eea57e8ea8763524c5c0adbc0712b381 357 SMART SM00028 25 58 44.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Trad_2783 eea57e8ea8763524c5c0adbc0712b381 357 SMART SM00028 136 169 0.006 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Trad_2783 eea57e8ea8763524c5c0adbc0712b381 357 SMART SM00028 238 271 17.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Trad_2783 eea57e8ea8763524c5c0adbc0712b381 357 SMART SM00028 204 237 0.013 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Trad_2783 eea57e8ea8763524c5c0adbc0712b381 357 SMART SM00028 59 92 3.3 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Trad_2783 eea57e8ea8763524c5c0adbc0712b381 357 Pfam PF13174 Tetratricopeptide repeat 309 344 0.0041 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Trad_2783 eea57e8ea8763524c5c0adbc0712b381 357 Gene3D G3DSA:1.25.40.10 112 270 1.7E-33 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Trad_2783 eea57e8ea8763524c5c0adbc0712b381 357 Gene3D G3DSA:1.25.40.10 16 111 3.3E-14 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Trad_2783 eea57e8ea8763524c5c0adbc0712b381 357 Pfam PF14559 Tetratricopeptide repeat 35 98 2.4E-6 T 15-10-2018 Trad_2783 eea57e8ea8763524c5c0adbc0712b381 357 Gene3D G3DSA:1.25.40.10 271 357 8.4E-12 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Trad_2783 eea57e8ea8763524c5c0adbc0712b381 357 SUPERFAMILY SSF48452 29 293 1.52E-37 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Trad_2783 eea57e8ea8763524c5c0adbc0712b381 357 Pfam PF13181 Tetratricopeptide repeat 204 236 0.006 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Trad_2783 eea57e8ea8763524c5c0adbc0712b381 357 Pfam PF13432 Tetratricopeptide repeat 243 300 0.0024 T 15-10-2018 Trad_2783 eea57e8ea8763524c5c0adbc0712b381 357 Pfam PF13432 Tetratricopeptide repeat 142 203 4.4E-9 T 15-10-2018 Trad_2985 d3f00510cdf1e21be8bacb21e4704bcb 409 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 139 409 4.3E-110 T 15-10-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Trad_2985 d3f00510cdf1e21be8bacb21e4704bcb 409 Gene3D G3DSA:1.10.645.20 26 409 5.4E-164 T 15-10-2018 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Trad_2985 d3f00510cdf1e21be8bacb21e4704bcb 409 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 13 409 47.71 T 15-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Trad_2985 d3f00510cdf1e21be8bacb21e4704bcb 409 SUPERFAMILY SSF56762 35 408 9.42E-129 T 15-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Trad_2985 d3f00510cdf1e21be8bacb21e4704bcb 409 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 25 409 1.7E-171 T 15-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Trad_2985 d3f00510cdf1e21be8bacb21e4704bcb 409 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 62 73 - T 15-10-2018 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Trad_0601 4bb7749d97fd8bf169fc8e77bae1ddf0 289 Pfam PF01882 Protein of unknown function DUF58 36 115 1.7E-17 T 15-10-2018 IPR002881 Domain of unknown function DUF58 Trad_0601 4bb7749d97fd8bf169fc8e77bae1ddf0 289 SUPERFAMILY SSF53300 76 201 1.11E-5 T 15-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Trad_1310 a27dded7c71c5e8be26568d99f743af5 161 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site Trad_1310 a27dded7c71c5e8be26568d99f743af5 161 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 27 8.2E-6 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site Trad_1310 a27dded7c71c5e8be26568d99f743af5 161 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 27 3.8E-5 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site Trad_2961 ae6b6c377ac4720158f1865b51a305ad 483 Pfam PF00128 Alpha amylase, catalytic domain 50 365 2.1E-70 T 15-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Trad_2961 ae6b6c377ac4720158f1865b51a305ad 483 SUPERFAMILY SSF51445 5 403 1.88E-110 T 15-10-2018 IPR017853 Glycoside hydrolase superfamily Trad_2961 ae6b6c377ac4720158f1865b51a305ad 483 Gene3D G3DSA:3.20.20.80 3 396 1.4E-141 T 15-10-2018 Trad_2961 ae6b6c377ac4720158f1865b51a305ad 483 Gene3D G3DSA:2.60.40.1180 397 481 7.0E-7 T 15-10-2018 IPR013780 Glycosyl hydrolase, all-beta Trad_2961 ae6b6c377ac4720158f1865b51a305ad 483 SMART SM00642 17 394 1.1E-98 T 15-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Trad_1264 405ab2136bb0f4084dd2025ff6ab3ad4 495 Pfam PF00884 Sulfatase 47 327 2.4E-44 T 15-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 Trad_1264 405ab2136bb0f4084dd2025ff6ab3ad4 495 ProSitePatterns PS00523 Sulfatases signature 1. 91 103 - T 15-10-2018 IPR024607 Sulfatase, conserved site Trad_1264 405ab2136bb0f4084dd2025ff6ab3ad4 495 Gene3D G3DSA:3.40.720.10 46 459 1.3E-93 T 15-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 Trad_1264 405ab2136bb0f4084dd2025ff6ab3ad4 495 SUPERFAMILY SSF53649 46 453 4.45E-93 T 15-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 Trad_0113 18dd989a882805826183d508e41a9b88 269 Pfam PF00005 ABC transporter 18 165 1.3E-27 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Trad_0113 18dd989a882805826183d508e41a9b88 269 SMART SM00382 26 213 1.2E-15 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_0113 18dd989a882805826183d508e41a9b88 269 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Trad_0113 18dd989a882805826183d508e41a9b88 269 Gene3D G3DSA:3.40.50.300 1 248 6.7E-67 T 15-10-2018 Trad_0113 18dd989a882805826183d508e41a9b88 269 SUPERFAMILY SSF52540 2 233 9.92E-56 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_2582 266bfd4bb1b380414c2cc7e8eb5c82f6 484 SMART SM00946 416 484 3.2E-19 T 15-10-2018 IPR016061 Proline-tRNA ligase, class II, C-terminal GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-6782315 Trad_2582 266bfd4bb1b380414c2cc7e8eb5c82f6 484 PRINTS PR01046 Prolyl-tRNA synthetase signature 67 85 1.3E-8 T 15-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 Trad_2582 266bfd4bb1b380414c2cc7e8eb5c82f6 484 PRINTS PR01046 Prolyl-tRNA synthetase signature 108 119 1.3E-8 T 15-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 Trad_2582 266bfd4bb1b380414c2cc7e8eb5c82f6 484 PRINTS PR01046 Prolyl-tRNA synthetase signature 147 158 1.3E-8 T 15-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 Trad_2582 266bfd4bb1b380414c2cc7e8eb5c82f6 484 PRINTS PR01046 Prolyl-tRNA synthetase signature 138 146 1.3E-8 T 15-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 Trad_2582 266bfd4bb1b380414c2cc7e8eb5c82f6 484 Gene3D G3DSA:3.30.930.10 3 284 5.2E-103 T 15-10-2018 Trad_2582 266bfd4bb1b380414c2cc7e8eb5c82f6 484 Hamap MF_01571 Proline--tRNA ligase [proS]. 9 484 44.08 T 15-10-2018 IPR004499 Proline-tRNA ligase, class IIa, archaeal-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-6782315 Trad_2582 266bfd4bb1b380414c2cc7e8eb5c82f6 484 Pfam PF09180 Prolyl-tRNA synthetase, C-terminal 417 484 7.1E-15 T 15-10-2018 IPR016061 Proline-tRNA ligase, class II, C-terminal GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-6782315 Trad_2582 266bfd4bb1b380414c2cc7e8eb5c82f6 484 SUPERFAMILY SSF64586 411 484 3.14E-18 T 15-10-2018 IPR017449 Prolyl-tRNA synthetase, class II GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-6782315 Trad_2582 266bfd4bb1b380414c2cc7e8eb5c82f6 484 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 105 272 2.2E-20 T 15-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Trad_2582 266bfd4bb1b380414c2cc7e8eb5c82f6 484 Gene3D G3DSA:3.40.50.800 285 406 7.3E-33 T 15-10-2018 IPR036621 Anticodon-binding domain superfamily Trad_2582 266bfd4bb1b380414c2cc7e8eb5c82f6 484 Gene3D G3DSA:3.30.110.30 410 484 2.7E-16 T 15-10-2018 IPR017449 Prolyl-tRNA synthetase, class II GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-6782315 Trad_2582 266bfd4bb1b380414c2cc7e8eb5c82f6 484 Pfam PF03129 Anticodon binding domain 291 387 3.5E-16 T 15-10-2018 IPR004154 Anticodon-binding Trad_2582 266bfd4bb1b380414c2cc7e8eb5c82f6 484 SUPERFAMILY SSF55681 14 278 3.04E-78 T 15-10-2018 Trad_2582 266bfd4bb1b380414c2cc7e8eb5c82f6 484 SUPERFAMILY SSF52954 279 408 4.74E-31 T 15-10-2018 Trad_2582 266bfd4bb1b380414c2cc7e8eb5c82f6 484 TIGRFAM TIGR00408 proS_fam_I: proline--tRNA ligase 11 484 1.9E-167 T 15-10-2018 IPR004499 Proline-tRNA ligase, class IIa, archaeal-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-6782315 Trad_2021 3264ed1274613d3fbc88514232b3d00e 207 SUPERFAMILY SSF160527 78 191 3.92E-10 T 15-10-2018 Trad_2021 3264ed1274613d3fbc88514232b3d00e 207 Gene3D G3DSA:1.20.5.620 2 97 4.4E-28 T 15-10-2018 Trad_2021 3264ed1274613d3fbc88514232b3d00e 207 Pfam PF01991 ATP synthase (E/31 kDa) subunit 9 191 2.0E-17 T 15-10-2018 IPR002842 V-type ATPase subunit E GO:0015991|GO:0033178|GO:0046961 Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 Trad_2021 3264ed1274613d3fbc88514232b3d00e 207 Gene3D G3DSA:3.30.2320.30 100 193 2.5E-17 T 15-10-2018 IPR038495 V-type ATPase subunit E, C-terminal domain superfamily Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 Trad_0094 ee81e96d1d78e0763bffe6c8010e5668 399 SMART SM01002 146 310 2.6E-66 T 15-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain Trad_0094 ee81e96d1d78e0763bffe6c8010e5668 399 Gene3D G3DSA:3.40.50.720 4 363 3.2E-125 T 15-10-2018 Trad_0094 ee81e96d1d78e0763bffe6c8010e5668 399 SUPERFAMILY SSF52283 1 168 1.96E-38 T 15-10-2018 Trad_0094 ee81e96d1d78e0763bffe6c8010e5668 399 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 141 367 2.5E-65 T 15-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain Trad_0094 ee81e96d1d78e0763bffe6c8010e5668 399 SUPERFAMILY SSF51735 137 316 4.67E-33 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_0094 ee81e96d1d78e0763bffe6c8010e5668 399 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 170 195 - T 15-10-2018 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|Reactome: R-HSA-71403 Trad_0094 ee81e96d1d78e0763bffe6c8010e5668 399 Gene3D G3DSA:3.40.50.720 137 317 3.2E-125 T 15-10-2018 Trad_0094 ee81e96d1d78e0763bffe6c8010e5668 399 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 6 137 2.9E-31 T 15-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal Trad_0094 ee81e96d1d78e0763bffe6c8010e5668 399 SMART SM01003 4 137 2.6E-39 T 15-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal Trad_1195 03f7a63915aa4b0462ce4ab993fd620f 149 SUPERFAMILY SSF88723 4 132 1.23E-11 T 15-10-2018 IPR029060 PIN-like domain superfamily Trad_1195 03f7a63915aa4b0462ce4ab993fd620f 149 Pfam PF10130 PIN domain 5 139 9.0E-34 T 15-10-2018 IPR002716 PIN domain Trad_2030 46150364944a7232d2ac882c0433b058 208 SUPERFAMILY SSF101386 2 100 1.29E-22 T 15-10-2018 Trad_2030 46150364944a7232d2ac882c0433b058 208 TIGRFAM TIGR00444 mazG: MazG family protein 8 146 6.5E-50 T 15-10-2018 IPR011551 NTP pyrophosphohydrolase MazG Trad_2030 46150364944a7232d2ac882c0433b058 208 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 23 96 3.9E-25 T 15-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core Trad_2030 46150364944a7232d2ac882c0433b058 208 Gene3D G3DSA:1.10.287.1080 1 121 3.6E-43 T 15-10-2018 Trad_2365 55de86781ef40b7cf549185b815a3720 393 PIRSF PIRSF038800 1 386 8.0E-131 T 15-10-2018 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|Reactome: R-HSA-71240 Trad_2365 55de86781ef40b7cf549185b815a3720 393 Pfam PF00266 Aminotransferase class-V 58 343 1.7E-24 T 15-10-2018 IPR000192 Aminotransferase class V domain Trad_2365 55de86781ef40b7cf549185b815a3720 393 Gene3D G3DSA:3.40.640.10 23 284 2.4E-129 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Trad_2365 55de86781ef40b7cf549185b815a3720 393 Hamap MF_01970 Kynureninase [kynU]. 1 378 35.196 T 15-10-2018 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|Reactome: R-HSA-71240 Trad_2365 55de86781ef40b7cf549185b815a3720 393 Gene3D G3DSA:3.90.1150.10 3 378 2.4E-129 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Trad_2365 55de86781ef40b7cf549185b815a3720 393 TIGRFAM TIGR01814 kynureninase: kynureninase 3 378 4.3E-95 T 15-10-2018 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|Reactome: R-HSA-71240 Trad_2365 55de86781ef40b7cf549185b815a3720 393 SUPERFAMILY SSF53383 3 379 9.46E-80 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Trad_2727 fb91f31b1a67f1a188f89511986f5030 213 Gene3D G3DSA:1.10.10.10 3 74 4.5E-27 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Trad_2727 fb91f31b1a67f1a188f89511986f5030 213 SUPERFAMILY SSF46785 5 77 3.36E-18 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Trad_2727 fb91f31b1a67f1a188f89511986f5030 213 Pfam PF06971 Putative DNA-binding protein N-terminus 4 50 1.1E-17 T 15-10-2018 IPR009718 Rex DNA-binding, C-terminal domain GO:0005737|GO:0045892|GO:0051775 Trad_2727 fb91f31b1a67f1a188f89511986f5030 213 SUPERFAMILY SSF51735 81 202 1.58E-29 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_2727 fb91f31b1a67f1a188f89511986f5030 213 SMART SM00881 77 178 4.4E-25 T 15-10-2018 IPR003781 CoA-binding GO:0048037 Trad_2727 fb91f31b1a67f1a188f89511986f5030 213 Gene3D G3DSA:3.40.50.720 75 213 1.7E-44 T 15-10-2018 Trad_2727 fb91f31b1a67f1a188f89511986f5030 213 Pfam PF02629 CoA binding domain 80 176 8.3E-25 T 15-10-2018 IPR003781 CoA-binding GO:0048037 Trad_2727 fb91f31b1a67f1a188f89511986f5030 213 Hamap MF_01131 Redox-sensing transcriptional repressor Rex [rex]. 1 207 34.397 T 15-10-2018 IPR022876 Redox-sensing transcriptional repressor Rex GO:0005737|GO:0045892|GO:0051775 Trad_1245 c8b3863302a373e39060b2ce18edab07 297 Gene3D G3DSA:1.10.10.10 4 88 2.6E-23 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Trad_1245 c8b3863302a373e39060b2ce18edab07 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 1.5E-8 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Trad_1245 c8b3863302a373e39060b2ce18edab07 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 1.5E-8 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Trad_1245 c8b3863302a373e39060b2ce18edab07 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 1.5E-8 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Trad_1245 c8b3863302a373e39060b2ce18edab07 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 1.3E-20 T 15-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Trad_1245 c8b3863302a373e39060b2ce18edab07 297 Gene3D G3DSA:3.40.190.10 93 281 2.7E-23 T 15-10-2018 Trad_1245 c8b3863302a373e39060b2ce18edab07 297 Gene3D G3DSA:3.40.190.10 170 273 2.7E-23 T 15-10-2018 Trad_1245 c8b3863302a373e39060b2ce18edab07 297 SUPERFAMILY SSF46785 4 111 1.79E-23 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Trad_1245 c8b3863302a373e39060b2ce18edab07 297 Pfam PF03466 LysR substrate binding domain 91 285 5.1E-27 T 15-10-2018 IPR005119 LysR, substrate-binding Trad_1245 c8b3863302a373e39060b2ce18edab07 297 SUPERFAMILY SSF53850 92 293 1.27E-25 T 15-10-2018 Trad_2848 9de7eacbe8e717039fc91837f538a84b 330 Gene3D G3DSA:3.40.50.1100 8 309 1.7E-106 T 15-10-2018 Trad_2848 9de7eacbe8e717039fc91837f538a84b 330 SUPERFAMILY SSF53686 5 310 1.44E-89 T 15-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Trad_2848 9de7eacbe8e717039fc91837f538a84b 330 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 22 304 6.1E-76 T 15-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Trad_2848 9de7eacbe8e717039fc91837f538a84b 330 Gene3D G3DSA:3.40.50.1100 51 147 1.7E-106 T 15-10-2018 Trad_2928 85957102b5495542e04d6c9c66999d8b 550 Hamap MF_00600 60 kDa chaperonin [groL]. 1 548 41.837 T 15-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Trad_2928 85957102b5495542e04d6c9c66999d8b 550 Gene3D G3DSA:3.50.7.10 190 370 1.4E-228 T 15-10-2018 IPR027409 GroEL-like apical domain superfamily Trad_2928 85957102b5495542e04d6c9c66999d8b 550 SUPERFAMILY SSF54849 137 201 8.93E-26 T 15-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily Trad_2928 85957102b5495542e04d6c9c66999d8b 550 SUPERFAMILY SSF52029 182 374 2.54E-84 T 15-10-2018 IPR027409 GroEL-like apical domain superfamily Trad_2928 85957102b5495542e04d6c9c66999d8b 550 TIGRFAM TIGR02348 GroEL: chaperonin GroL 2 528 5.7E-251 T 15-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Trad_2928 85957102b5495542e04d6c9c66999d8b 550 Gene3D G3DSA:1.10.560.10 7 522 1.4E-228 T 15-10-2018 IPR027413 GroEL-like equatorial domain superfamily Trad_2928 85957102b5495542e04d6c9c66999d8b 550 SUPERFAMILY SSF48592 6 522 9.92E-78 T 15-10-2018 IPR027413 GroEL-like equatorial domain superfamily Trad_2928 85957102b5495542e04d6c9c66999d8b 550 Pfam PF00118 TCP-1/cpn60 chaperonin family 22 525 1.4E-99 T 15-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 Trad_2928 85957102b5495542e04d6c9c66999d8b 550 Gene3D G3DSA:3.30.260.10 135 408 1.4E-228 T 15-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily Trad_2928 85957102b5495542e04d6c9c66999d8b 550 PRINTS PR00298 60kDa chaperonin signature 82 109 1.1E-69 T 15-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Trad_2928 85957102b5495542e04d6c9c66999d8b 550 PRINTS PR00298 60kDa chaperonin signature 26 52 1.1E-69 T 15-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Trad_2928 85957102b5495542e04d6c9c66999d8b 550 PRINTS PR00298 60kDa chaperonin signature 396 417 1.1E-69 T 15-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Trad_2928 85957102b5495542e04d6c9c66999d8b 550 PRINTS PR00298 60kDa chaperonin signature 348 373 1.1E-69 T 15-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Trad_2928 85957102b5495542e04d6c9c66999d8b 550 PRINTS PR00298 60kDa chaperonin signature 266 289 1.1E-69 T 15-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Trad_1841 e6405d762534325386d540b4385ac949 444 SUPERFAMILY SSF51735 4 165 3.94E-39 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_1841 e6405d762534325386d540b4385ac949 444 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 146 224 1.4E-21 T 15-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 Trad_1841 e6405d762534325386d540b4385ac949 444 Gene3D G3DSA:3.40.50.720 2 144 1.0E-25 T 15-10-2018 Trad_1841 e6405d762534325386d540b4385ac949 444 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 7 134 7.6E-18 T 15-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 Trad_1841 e6405d762534325386d540b4385ac949 444 SUPERFAMILY SSF55347 139 352 1.74E-35 T 15-10-2018 Trad_1146 6ecf1d492db47bd0fc0e278af8f79c3e 179 Pfam PF06243 Phenylacetic acid degradation B 4 68 3.8E-27 T 15-10-2018 IPR009359 Phenylacetic acid degradation B Trad_1146 6ecf1d492db47bd0fc0e278af8f79c3e 179 Pfam PF06243 Phenylacetic acid degradation B 82 167 5.7E-12 T 15-10-2018 IPR009359 Phenylacetic acid degradation B Trad_1146 6ecf1d492db47bd0fc0e278af8f79c3e 179 Gene3D G3DSA:3.10.20.520 1 63 1.3E-22 T 15-10-2018 IPR038693 Phenylacetyl-CoA epoxidase, subunit B Trad_0004 cd33e9d799e836698d8546e108d64fea 483 Pfam PF00224 Pyruvate kinase, barrel domain 5 338 2.7E-130 T 15-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Trad_0004 cd33e9d799e836698d8546e108d64fea 483 PRINTS PR01050 Pyruvate kinase family signature 62 78 1.5E-67 T 15-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Trad_0004 cd33e9d799e836698d8546e108d64fea 483 PRINTS PR01050 Pyruvate kinase family signature 218 244 1.5E-67 T 15-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Trad_0004 cd33e9d799e836698d8546e108d64fea 483 PRINTS PR01050 Pyruvate kinase family signature 245 269 1.5E-67 T 15-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Trad_0004 cd33e9d799e836698d8546e108d64fea 483 PRINTS PR01050 Pyruvate kinase family signature 188 202 1.5E-67 T 15-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Trad_0004 cd33e9d799e836698d8546e108d64fea 483 PRINTS PR01050 Pyruvate kinase family signature 314 330 1.5E-67 T 15-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Trad_0004 cd33e9d799e836698d8546e108d64fea 483 PRINTS PR01050 Pyruvate kinase family signature 295 313 1.5E-67 T 15-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Trad_0004 cd33e9d799e836698d8546e108d64fea 483 PRINTS PR01050 Pyruvate kinase family signature 270 294 1.5E-67 T 15-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Trad_0004 cd33e9d799e836698d8546e108d64fea 483 SUPERFAMILY SSF51621 3 341 3.4E-100 T 15-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Trad_0004 cd33e9d799e836698d8546e108d64fea 483 SUPERFAMILY SSF50800 73 169 2.62E-29 T 15-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily Trad_0004 cd33e9d799e836698d8546e108d64fea 483 Gene3D G3DSA:2.40.33.10 73 170 6.6E-182 T 15-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Trad_0004 cd33e9d799e836698d8546e108d64fea 483 SUPERFAMILY SSF52935 324 478 5.76E-38 T 15-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Trad_0004 cd33e9d799e836698d8546e108d64fea 483 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 5 477 8.6E-169 T 15-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Trad_0004 cd33e9d799e836698d8546e108d64fea 483 Gene3D G3DSA:3.40.1380.20 337 474 6.6E-182 T 15-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Trad_0004 cd33e9d799e836698d8546e108d64fea 483 ProSitePatterns PS00110 Pyruvate kinase active site signature. 216 228 - T 15-10-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Trad_0004 cd33e9d799e836698d8546e108d64fea 483 Pfam PF02887 Pyruvate kinase, alpha/beta domain 359 475 7.8E-31 T 15-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Trad_0004 cd33e9d799e836698d8546e108d64fea 483 Gene3D G3DSA:3.20.20.60 5 336 6.6E-182 T 15-10-2018 Trad_0240 854e82cc08c2060727d6ffff2937a0fa 532 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 55 468 9.6E-82 T 15-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 Trad_0240 854e82cc08c2060727d6ffff2937a0fa 532 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 2 506 18.471 T 15-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 Trad_0240 854e82cc08c2060727d6ffff2937a0fa 532 SUPERFAMILY SSF56317 230 499 3.01E-37 T 15-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Trad_0240 854e82cc08c2060727d6ffff2937a0fa 532 Gene3D G3DSA:3.60.110.10 244 490 1.8E-14 T 15-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Trad_0240 854e82cc08c2060727d6ffff2937a0fa 532 Pfam PF00795 Carbon-nitrogen hydrolase 234 485 9.8E-24 T 15-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 Trad_0067 966595284e21194cc9277797bcdbfb1e 178 SMART SM00935 18 166 4.8E-24 T 15-10-2018 IPR005632 Chaperone protein Skp GO:0051082 Trad_0067 966595284e21194cc9277797bcdbfb1e 178 SUPERFAMILY SSF111384 30 165 7.45E-16 T 15-10-2018 Trad_0067 966595284e21194cc9277797bcdbfb1e 178 Gene3D G3DSA:3.30.910.20 22 166 2.0E-16 T 15-10-2018 IPR024930 Skp domain superfamily Trad_0067 966595284e21194cc9277797bcdbfb1e 178 Pfam PF03938 Outer membrane protein (OmpH-like) 15 164 4.2E-21 T 15-10-2018 IPR005632 Chaperone protein Skp GO:0051082 Trad_1525 fc9675136fdc837bc34ee713482483bc 450 SUPERFAMILY SSF88659 37 102 2.35E-8 T 15-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Trad_1525 fc9675136fdc837bc34ee713482483bc 450 SUPERFAMILY SSF56349 159 440 9.12E-35 T 15-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Trad_1525 fc9675136fdc837bc34ee713482483bc 450 Pfam PF00589 Phage integrase family 286 440 6.2E-18 T 15-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Trad_1525 fc9675136fdc837bc34ee713482483bc 450 Gene3D G3DSA:1.10.10.10 33 110 1.0E-9 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Trad_1525 fc9675136fdc837bc34ee713482483bc 450 Gene3D G3DSA:1.10.443.10 280 449 3.7E-27 T 15-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Trad_0463 21f87bfe77d09283eeca2898b2da82fc 1006 SUPERFAMILY SSF56176 27 286 2.73E-58 T 15-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Trad_0463 21f87bfe77d09283eeca2898b2da82fc 1006 Pfam PF13183 4Fe-4S dicluster domain 573 647 3.6E-9 T 15-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Trad_0463 21f87bfe77d09283eeca2898b2da82fc 1006 Gene3D G3DSA:1.10.45.10 504 536 6.7E-6 T 15-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 Trad_0463 21f87bfe77d09283eeca2898b2da82fc 1006 Pfam PF02754 Cysteine-rich domain 764 837 4.1E-4 T 15-10-2018 IPR004017 Cysteine-rich domain Trad_0463 21f87bfe77d09283eeca2898b2da82fc 1006 Gene3D G3DSA:3.30.70.2740 414 495 4.7E-7 T 15-10-2018 Trad_0463 21f87bfe77d09283eeca2898b2da82fc 1006 Pfam PF01565 FAD binding domain 61 198 3.1E-37 T 15-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 Trad_0463 21f87bfe77d09283eeca2898b2da82fc 1006 SUPERFAMILY SSF46548 559 652 2.77E-9 T 15-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Trad_0463 21f87bfe77d09283eeca2898b2da82fc 1006 SUPERFAMILY SSF55103 289 539 2.78E-51 T 15-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 Trad_0463 21f87bfe77d09283eeca2898b2da82fc 1006 Pfam PF02913 FAD linked oxidases, C-terminal domain 286 535 9.4E-55 T 15-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 Trad_0463 21f87bfe77d09283eeca2898b2da82fc 1006 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 634 645 - T 15-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Trad_2885 12aef1d1254a4f8d71f9fd00bd74251e 1076 SUPERFAMILY SSF52540 116 352 7.13E-6 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_2885 12aef1d1254a4f8d71f9fd00bd74251e 1076 Gene3D G3DSA:1.25.40.10 451 953 9.9E-11 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Trad_2885 12aef1d1254a4f8d71f9fd00bd74251e 1076 SUPERFAMILY SSF48452 654 789 7.38E-8 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Trad_1051 22a3c716c0b769456821c53711a66a0a 61 Pfam PF00253 Ribosomal protein S14p/S29e 10 60 5.0E-23 T 15-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Trad_1051 22a3c716c0b769456821c53711a66a0a 61 Hamap MF_01364_B 30S ribosomal protein S14 type Z [rpsZ]. 1 61 24.087 T 15-10-2018 IPR023053 Ribosomal protein S14, type Z Trad_1051 22a3c716c0b769456821c53711a66a0a 61 Gene3D G3DSA:4.10.830.10 1 61 3.9E-29 T 15-10-2018 Trad_1051 22a3c716c0b769456821c53711a66a0a 61 SUPERFAMILY SSF57716 6 61 1.28E-20 T 15-10-2018 Trad_1051 22a3c716c0b769456821c53711a66a0a 61 ProSitePatterns PS00527 Ribosomal protein S14 signature. 23 45 - T 15-10-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Trad_0120 299663eb6a95967a0a816a2402397843 492 Gene3D G3DSA:3.40.309.10 267 456 3.5E-167 T 15-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Trad_0120 299663eb6a95967a0a816a2402397843 492 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 262 269 - T 15-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 Trad_0120 299663eb6a95967a0a816a2402397843 492 Gene3D G3DSA:3.40.605.10 23 484 3.5E-167 T 15-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Trad_0120 299663eb6a95967a0a816a2402397843 492 Pfam PF00171 Aldehyde dehydrogenase family 27 486 9.9E-161 T 15-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Trad_0120 299663eb6a95967a0a816a2402397843 492 SUPERFAMILY SSF53720 17 489 3.53E-164 T 15-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Trad_1399 5bdaee85efb94ee348a11951edce9090 267 PIRSF PIRSF000728 1 267 5.9E-77 T 15-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Trad_1399 5bdaee85efb94ee348a11951edce9090 267 SUPERFAMILY SSF53633 2 266 3.4E-57 T 15-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Trad_1399 5bdaee85efb94ee348a11951edce9090 267 Gene3D G3DSA:3.40.1160.10 1 267 3.2E-74 T 15-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Trad_1399 5bdaee85efb94ee348a11951edce9090 267 Hamap MF_02082 [LysW]-aminoadipate/[LysW]-glutamate kinase [lysZ]. 1 267 49.388 T 15-10-2018 IPR037529 [LysW]-aminoadipate/[LysW]-glutamate kinase GO:0016301 Trad_1399 5bdaee85efb94ee348a11951edce9090 267 TIGRFAM TIGR00761 argB: acetylglutamate kinase 1 245 6.2E-71 T 15-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Trad_1399 5bdaee85efb94ee348a11951edce9090 267 PRINTS PR00474 Glutamate 5-kinase family signature 221 241 1.9E-10 T 15-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Trad_1399 5bdaee85efb94ee348a11951edce9090 267 PRINTS PR00474 Glutamate 5-kinase family signature 170 197 1.9E-10 T 15-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Trad_1399 5bdaee85efb94ee348a11951edce9090 267 PRINTS PR00474 Glutamate 5-kinase family signature 28 42 1.9E-10 T 15-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Trad_1399 5bdaee85efb94ee348a11951edce9090 267 Pfam PF00696 Amino acid kinase family 1 246 6.9E-41 T 15-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 Trad_2550 e21aa76e59c684240d915b86dd4f340f 488 Gene3D G3DSA:3.30.70.1450 414 481 2.3E-14 T 15-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Trad_2550 e21aa76e59c684240d915b86dd4f340f 488 Pfam PF02080 TrkA-C domain 422 471 5.6E-12 T 15-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 Trad_2550 e21aa76e59c684240d915b86dd4f340f 488 Pfam PF00999 Sodium/hydrogen exchanger family 10 389 1.3E-49 T 15-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 Trad_2550 e21aa76e59c684240d915b86dd4f340f 488 SUPERFAMILY SSF116726 416 471 1.83E-11 T 15-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Trad_2550 e21aa76e59c684240d915b86dd4f340f 488 Gene3D G3DSA:1.20.1530.20 3 392 1.4E-18 T 15-10-2018 IPR038770 Sodium/solute symporter superfamily Trad_2284 b5509016656f5d04ae0ddc9e6aacd12c 345 Gene3D G3DSA:3.20.20.140 1 344 9.1E-72 T 15-10-2018 Trad_2284 b5509016656f5d04ae0ddc9e6aacd12c 345 Pfam PF01244 Membrane dipeptidase (Peptidase family M19) 3 340 1.4E-54 T 15-10-2018 IPR008257 Peptidase M19 GO:0006508|GO:0016805 MetaCyc: PWY-7533|Reactome: R-HSA-2142691|Reactome: R-HSA-5423646 Trad_2284 b5509016656f5d04ae0ddc9e6aacd12c 345 SUPERFAMILY SSF51556 3 343 1.36E-58 T 15-10-2018 IPR032466 Metal-dependent hydrolase Trad_1483 4c12322b77022ac92326fdf1153092e0 277 Gene3D G3DSA:3.40.50.1000 5 254 3.0E-82 T 15-10-2018 IPR023214 HAD superfamily Trad_1483 4c12322b77022ac92326fdf1153092e0 277 Pfam PF13344 Haloacid dehalogenase-like hydrolase 6 106 7.0E-26 T 15-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA Trad_1483 4c12322b77022ac92326fdf1153092e0 277 Pfam PF13242 HAD-hyrolase-like 187 259 6.3E-25 T 15-10-2018 Trad_1483 4c12322b77022ac92326fdf1153092e0 277 TIGRFAM TIGR01460 HAD-SF-IIA: HAD hydrolase, family IIA 6 236 8.3E-47 T 15-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA Trad_1483 4c12322b77022ac92326fdf1153092e0 277 Gene3D G3DSA:3.40.50.1000 71 188 3.0E-82 T 15-10-2018 IPR023214 HAD superfamily Trad_1483 4c12322b77022ac92326fdf1153092e0 277 PIRSF PIRSF000915 1 266 2.6E-61 T 15-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA Trad_1483 4c12322b77022ac92326fdf1153092e0 277 SUPERFAMILY SSF56784 3 260 1.18E-67 T 15-10-2018 IPR036412 HAD-like superfamily Trad_0741 97bded8a24946b5cec6bd47fcf0c2a07 274 ProSitePatterns PS00552 MerR-type HTH domain signature. 5 27 - T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Trad_0741 97bded8a24946b5cec6bd47fcf0c2a07 274 SUPERFAMILY SSF55136 120 273 1.15E-12 T 15-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily Trad_0741 97bded8a24946b5cec6bd47fcf0c2a07 274 SUPERFAMILY SSF46955 2 102 3.41E-26 T 15-10-2018 IPR009061 Putative DNA-binding domain superfamily Trad_0741 97bded8a24946b5cec6bd47fcf0c2a07 274 Pfam PF13411 MerR HTH family regulatory protein 2 71 8.3E-15 T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Trad_0741 97bded8a24946b5cec6bd47fcf0c2a07 274 Gene3D G3DSA:3.20.80.10 116 272 6.3E-20 T 15-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily Trad_0741 97bded8a24946b5cec6bd47fcf0c2a07 274 Pfam PF06445 GyrI-like small molecule binding domain 120 271 3.4E-9 T 15-10-2018 IPR029442 GyrI-like small molecule binding domain Trad_0741 97bded8a24946b5cec6bd47fcf0c2a07 274 Gene3D G3DSA:1.10.1660.10 1 113 1.3E-26 T 15-10-2018 Trad_0741 97bded8a24946b5cec6bd47fcf0c2a07 274 SMART SM00871 119 272 4.1E-9 T 15-10-2018 IPR010499 Bacterial transcription activator, effector binding Trad_0741 97bded8a24946b5cec6bd47fcf0c2a07 274 SMART SM00422 2 72 2.4E-23 T 15-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Trad_2636 efb3b9d5f852a41c6dda1839fc4f793f 538 SUPERFAMILY SSF49299 335 424 1.44E-21 T 15-10-2018 IPR035986 PKD domain superfamily Trad_2636 efb3b9d5f852a41c6dda1839fc4f793f 538 Pfam PF00801 PKD domain 343 414 1.1E-16 T 15-10-2018 IPR000601 PKD domain Trad_2636 efb3b9d5f852a41c6dda1839fc4f793f 538 SMART SM00089 339 426 1.2E-18 T 15-10-2018 IPR022409 PKD/Chitinase domain Trad_2636 efb3b9d5f852a41c6dda1839fc4f793f 538 SMART SM00089 183 265 4.2 T 15-10-2018 IPR022409 PKD/Chitinase domain Trad_2636 efb3b9d5f852a41c6dda1839fc4f793f 538 Gene3D G3DSA:2.60.40.10 331 426 1.3E-23 T 15-10-2018 IPR013783 Immunoglobulin-like fold Trad_2636 efb3b9d5f852a41c6dda1839fc4f793f 538 Gene3D G3DSA:2.60.40.10 176 267 7.1E-8 T 15-10-2018 IPR013783 Immunoglobulin-like fold Trad_0606 f8790e702afcbb2ccbb5b446d9b4000f 195 SUPERFAMILY SSF53271 3 191 1.19E-42 T 15-10-2018 IPR029057 Phosphoribosyltransferase-like Trad_0606 f8790e702afcbb2ccbb5b446d9b4000f 195 Gene3D G3DSA:3.30.1310.20 63 120 3.5E-17 T 15-10-2018 Trad_0606 f8790e702afcbb2ccbb5b446d9b4000f 195 Pfam PF00156 Phosphoribosyl transferase domain 8 153 2.5E-17 T 15-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 Trad_0748 afb57c5fc3a20f1bc465bdc0650a3438 478 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 247 476 2.6E-83 T 15-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 Trad_0748 afb57c5fc3a20f1bc465bdc0650a3438 478 Gene3D G3DSA:4.10.320.10 177 215 1.3E-16 T 15-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 Trad_0748 afb57c5fc3a20f1bc465bdc0650a3438 478 Gene3D G3DSA:2.40.50.100 2 101 2.2E-23 T 15-10-2018 Trad_0748 afb57c5fc3a20f1bc465bdc0650a3438 478 Gene3D G3DSA:3.30.559.10 227 475 2.3E-86 T 15-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 Trad_0748 afb57c5fc3a20f1bc465bdc0650a3438 478 Pfam PF02817 e3 binding domain 176 211 4.5E-14 T 15-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 Trad_0748 afb57c5fc3a20f1bc465bdc0650a3438 478 SUPERFAMILY SSF51230 2 93 2.75E-25 T 15-10-2018 IPR011053 Single hybrid motif Trad_0748 afb57c5fc3a20f1bc465bdc0650a3438 478 SUPERFAMILY SSF47005 172 214 4.71E-11 T 15-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 Trad_0748 afb57c5fc3a20f1bc465bdc0650a3438 478 SUPERFAMILY SSF52777 236 476 2.45E-83 T 15-10-2018 Trad_0748 afb57c5fc3a20f1bc465bdc0650a3438 478 Pfam PF00364 Biotin-requiring enzyme 4 74 5.1E-18 T 15-10-2018 IPR000089 Biotin/lipoyl attachment Trad_0748 afb57c5fc3a20f1bc465bdc0650a3438 478 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 15-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 Trad_1924 e15572561ab6ea0d2d61853023757725 154 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 6 135 1.4E-21 T 15-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 Trad_1924 e15572561ab6ea0d2d61853023757725 154 SUPERFAMILY SSF53098 4 136 3.03E-28 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily Trad_1924 e15572561ab6ea0d2d61853023757725 154 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 3 139 20.011 T 15-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 Trad_1924 e15572561ab6ea0d2d61853023757725 154 Pfam PF03652 Holliday junction resolvase 4 136 2.8E-32 T 15-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 Trad_1924 e15572561ab6ea0d2d61853023757725 154 SMART SM00732 3 102 8.2E-16 T 15-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 Trad_1924 e15572561ab6ea0d2d61853023757725 154 Gene3D G3DSA:3.30.420.140 1 138 8.7E-34 T 15-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 Trad_0342 7d226b63ec4b5d6513a3f71788ff8bde 285 Pfam PF01972 Serine dehydrogenase proteinase 6 273 9.5E-123 T 15-10-2018 IPR002825 Peptidase S49, serine-peptidase prokaryotes GO:0016021 Trad_0342 7d226b63ec4b5d6513a3f71788ff8bde 285 Gene3D G3DSA:3.90.226.10 52 242 2.0E-23 T 15-10-2018 Trad_0342 7d226b63ec4b5d6513a3f71788ff8bde 285 SUPERFAMILY SSF52096 53 236 5.2E-29 T 15-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Trad_0850 39cce7a670145999c9a32837a67facd8 254 SUPERFAMILY SSF52540 31 201 3.42E-11 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_0850 39cce7a670145999c9a32837a67facd8 254 Gene3D G3DSA:3.40.50.300 30 232 1.6E-10 T 15-10-2018 Trad_0850 39cce7a670145999c9a32837a67facd8 254 Pfam PF13671 AAA domain 35 79 2.6E-7 T 15-10-2018 Trad_1011 f00033f7c19246db7dba38859f6354df 729 SUPERFAMILY SSF55021 647 723 3.75E-8 T 15-10-2018 Trad_1011 f00033f7c19246db7dba38859f6354df 729 SUPERFAMILY SSF81271 388 461 5.45E-22 T 15-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 Trad_1011 f00033f7c19246db7dba38859f6354df 729 Gene3D G3DSA:3.30.70.260 647 725 7.4E-13 T 15-10-2018 Trad_1011 f00033f7c19246db7dba38859f6354df 729 Pfam PF02824 TGS domain 403 460 1.5E-21 T 15-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 Trad_1011 f00033f7c19246db7dba38859f6354df 729 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 25 720 5.7E-217 T 15-10-2018 IPR004811 RelA/SpoT family GO:0015969 Trad_1011 f00033f7c19246db7dba38859f6354df 729 SUPERFAMILY SSF81301 195 377 3.6E-57 T 15-10-2018 Trad_1011 f00033f7c19246db7dba38859f6354df 729 SMART SM00471 40 156 2.0E-11 T 15-10-2018 IPR003607 HD/PDEase domain Trad_1011 f00033f7c19246db7dba38859f6354df 729 Gene3D G3DSA:3.10.20.30 394 466 3.7E-31 T 15-10-2018 IPR012675 Beta-grasp domain superfamily Trad_1011 f00033f7c19246db7dba38859f6354df 729 SUPERFAMILY SSF109604 10 193 6.12E-70 T 15-10-2018 Trad_1011 f00033f7c19246db7dba38859f6354df 729 Gene3D G3DSA:1.10.3210.10 2 194 1.5E-77 T 15-10-2018 Trad_1011 f00033f7c19246db7dba38859f6354df 729 SMART SM00954 238 359 6.5E-61 T 15-10-2018 IPR007685 RelA/SpoT GO:0015969 Trad_1011 f00033f7c19246db7dba38859f6354df 729 Pfam PF13328 HD domain 25 178 1.4E-51 T 15-10-2018 IPR003607 HD/PDEase domain Trad_1011 f00033f7c19246db7dba38859f6354df 729 Pfam PF04607 Region found in RelA / SpoT proteins 238 357 6.9E-32 T 15-10-2018 IPR007685 RelA/SpoT GO:0015969 Trad_1011 f00033f7c19246db7dba38859f6354df 729 Pfam PF13291 ACT domain 645 722 6.3E-14 T 15-10-2018 IPR002912 ACT domain Trad_1011 f00033f7c19246db7dba38859f6354df 729 Gene3D G3DSA:3.30.460.10 196 339 5.8E-48 T 15-10-2018 Trad_0374 a068665ab1fe43255623ebeb108a3e78 317 Pfam PF10343 Potential Queuosine, Q, salvage protein family 48 317 1.4E-61 T 15-10-2018 IPR019438 Queuosine salvage protein family Trad_1787 4b58c4ef92841df6b65394c2dec61537 90 Pfam PF13396 Phospholipase_D-nuclease N-terminal 46 73 1.1E-4 T 15-10-2018 IPR027379 Cardiolipin synthase N-terminal Trad_2201 c59b94c79aa8e834a99bc22d8b011f99 131 Pfam PF09862 Protein of unknown function (DUF2089) 16 127 1.1E-38 T 15-10-2018 IPR018658 Protein of unknown function DUF2089 Trad_0568 341f3557725418915e2e886b5037dcd0 217 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 8 198 8.8E-50 T 15-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 Trad_0568 341f3557725418915e2e886b5037dcd0 217 Hamap MF_00165 Thymidylate kinase [tmk]. 10 209 29.003 T 15-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 Trad_0568 341f3557725418915e2e886b5037dcd0 217 Pfam PF02223 Thymidylate kinase 14 198 2.0E-46 T 15-10-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 Trad_0568 341f3557725418915e2e886b5037dcd0 217 SUPERFAMILY SSF52540 8 208 7.21E-51 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_0568 341f3557725418915e2e886b5037dcd0 217 Gene3D G3DSA:3.40.50.300 6 211 7.4E-65 T 15-10-2018 Trad_1130 74312741be51cd0c41faecc860e04cd9 467 Gene3D G3DSA:2.30.42.10 15 69 7.0E-7 T 15-10-2018 Trad_1130 74312741be51cd0c41faecc860e04cd9 467 SUPERFAMILY SSF102114 96 269 1.27E-9 T 15-10-2018 Trad_1130 74312741be51cd0c41faecc860e04cd9 467 SUPERFAMILY SSF50156 14 70 1.84E-7 T 15-10-2018 IPR036034 PDZ superfamily GO:0005515 Trad_1130 74312741be51cd0c41faecc860e04cd9 467 Pfam PF04459 Protein of unknown function (DUF512) 233 429 8.7E-58 T 15-10-2018 IPR007549 Domain of unknown function DUF512 Trad_2169 3cedcc3d89a0c1c6e09e89420f83e87a 489 SUPERFAMILY SSF52743 171 482 2.75E-72 T 15-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Trad_2169 3cedcc3d89a0c1c6e09e89420f83e87a 489 Pfam PF00082 Subtilase family 190 473 1.8E-43 T 15-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 Trad_2169 3cedcc3d89a0c1c6e09e89420f83e87a 489 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 239 249 - T 15-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site Trad_2169 3cedcc3d89a0c1c6e09e89420f83e87a 489 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 424 434 - T 15-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site Trad_2169 3cedcc3d89a0c1c6e09e89420f83e87a 489 PRINTS PR00723 Subtilisin serine protease family (S8) signature 235 248 2.0E-15 T 15-10-2018 IPR015500 Peptidase S8, subtilisin-related Trad_2169 3cedcc3d89a0c1c6e09e89420f83e87a 489 PRINTS PR00723 Subtilisin serine protease family (S8) signature 423 439 2.0E-15 T 15-10-2018 IPR015500 Peptidase S8, subtilisin-related Trad_2169 3cedcc3d89a0c1c6e09e89420f83e87a 489 PRINTS PR00723 Subtilisin serine protease family (S8) signature 189 208 2.0E-15 T 15-10-2018 IPR015500 Peptidase S8, subtilisin-related Trad_2169 3cedcc3d89a0c1c6e09e89420f83e87a 489 Gene3D G3DSA:3.40.50.200 161 485 1.5E-86 T 15-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Trad_1023 498ad088b2f4c1d0dafa01ceb43585ec 211 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 88 167 1.5E-14 T 15-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Trad_1023 498ad088b2f4c1d0dafa01ceb43585ec 211 SUPERFAMILY SSF46626 77 171 1.95E-17 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Trad_1023 498ad088b2f4c1d0dafa01ceb43585ec 211 Gene3D G3DSA:1.10.760.10 77 182 3.4E-14 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Trad_2620 c8b98b1bf80458c15b860df81cbc25c3 285 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 57 278 2.4E-19 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Trad_2620 c8b98b1bf80458c15b860df81cbc25c3 285 Gene3D G3DSA:1.10.3720.10 46 279 9.4E-55 T 15-10-2018 IPR035906 MetI-like superfamily Trad_2620 c8b98b1bf80458c15b860df81cbc25c3 285 SUPERFAMILY SSF161098 50 267 1.44E-45 T 15-10-2018 IPR035906 MetI-like superfamily Trad_0791 9d2a777c8bc7c268c4e0cf6dec02e128 223 SMART SM00448 3 115 2.8E-38 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Trad_0791 9d2a777c8bc7c268c4e0cf6dec02e128 223 Gene3D G3DSA:3.40.50.2300 2 128 1.3E-34 T 15-10-2018 Trad_0791 9d2a777c8bc7c268c4e0cf6dec02e128 223 Pfam PF00072 Response regulator receiver domain 5 115 9.8E-26 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Trad_0791 9d2a777c8bc7c268c4e0cf6dec02e128 223 SUPERFAMILY SSF52172 3 175 1.07E-37 T 15-10-2018 IPR011006 CheY-like superfamily Trad_0791 9d2a777c8bc7c268c4e0cf6dec02e128 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 221 1.0E-20 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Trad_0791 9d2a777c8bc7c268c4e0cf6dec02e128 223 SMART SM00862 147 222 2.1E-22 T 15-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Trad_0791 9d2a777c8bc7c268c4e0cf6dec02e128 223 Gene3D G3DSA:1.10.10.10 129 223 2.4E-26 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Trad_2652 9179b13f6d813ebdbd4dfca483d9ab74 442 Gene3D G3DSA:3.50.50.60 5 176 7.5E-50 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Trad_2652 9179b13f6d813ebdbd4dfca483d9ab74 442 Gene3D G3DSA:3.50.50.60 289 441 2.8E-46 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Trad_2652 9179b13f6d813ebdbd4dfca483d9ab74 442 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 336 359 - T 15-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 Trad_2652 9179b13f6d813ebdbd4dfca483d9ab74 442 Pfam PF01134 Glucose inhibited division protein A 6 365 1.6E-100 T 15-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 Trad_2652 9179b13f6d813ebdbd4dfca483d9ab74 442 TIGRFAM TIGR00137 gid_trmFO: tRNA:m(5)U-54 methyltransferase 6 434 6.4E-177 T 15-10-2018 IPR004417 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO GO:0005737|GO:0008033|GO:0047151|GO:0050660 Trad_2652 9179b13f6d813ebdbd4dfca483d9ab74 442 SUPERFAMILY SSF51905 3 365 2.49E-24 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Trad_2652 9179b13f6d813ebdbd4dfca483d9ab74 442 Hamap MF_01037 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO [trmFO]. 6 434 32.732 T 15-10-2018 IPR004417 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO GO:0005737|GO:0008033|GO:0047151|GO:0050660 Trad_0029 399b5de22b963d7be037d2e59f7451f2 112 SUPERFAMILY SSF52980 4 103 2.95E-18 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 Trad_0029 399b5de22b963d7be037d2e59f7451f2 112 Pfam PF02021 Uncharacterised protein family UPF0102 5 96 2.2E-25 T 15-10-2018 IPR003509 Uncharacterised protein family UPF0102 Trad_0029 399b5de22b963d7be037d2e59f7451f2 112 Hamap MF_00048 UPF0102 protein YraN [yraN]. 1 109 17.467 T 15-10-2018 IPR003509 Uncharacterised protein family UPF0102 Trad_0029 399b5de22b963d7be037d2e59f7451f2 112 Gene3D G3DSA:3.40.1350.10 4 112 3.3E-29 T 15-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 Trad_1648 2843f471f48f4a10f4ddd050b82e7763 372 Gene3D G3DSA:3.40.50.450 4 300 6.5E-101 T 15-10-2018 Trad_1648 2843f471f48f4a10f4ddd050b82e7763 372 SUPERFAMILY SSF102405 84 298 2.44E-39 T 15-10-2018 Trad_1648 2843f471f48f4a10f4ddd050b82e7763 372 Pfam PF14520 Helix-hairpin-helix domain 15 59 2.0E-8 T 15-10-2018 Trad_1648 2843f471f48f4a10f4ddd050b82e7763 372 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 77 298 9.2E-72 T 15-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 Trad_1648 2843f471f48f4a10f4ddd050b82e7763 372 SUPERFAMILY SSF47781 14 73 1.84E-11 T 15-10-2018 IPR010994 RuvA domain 2-like Trad_1648 2843f471f48f4a10f4ddd050b82e7763 372 Pfam PF02481 DNA recombination-mediator protein A 76 288 2.2E-72 T 15-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 Trad_2009 c93fc718ad5e0584d456bd86f4417ab7 219 Hamap MF_01584 UPF0502 protein YceH [yceH]. 3 204 29.531 T 15-10-2018 IPR007432 Protein of unknown function DUF480 Trad_2009 c93fc718ad5e0584d456bd86f4417ab7 219 Gene3D G3DSA:1.10.10.10 1 88 2.1E-33 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Trad_2009 c93fc718ad5e0584d456bd86f4417ab7 219 Pfam PF04337 Protein of unknown function, DUF480 3 151 7.1E-59 T 15-10-2018 IPR007432 Protein of unknown function DUF480 Trad_2009 c93fc718ad5e0584d456bd86f4417ab7 219 Gene3D G3DSA:1.10.10.10 89 167 1.6E-26 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Trad_2009 c93fc718ad5e0584d456bd86f4417ab7 219 SUPERFAMILY SSF46785 2 82 1.01E-27 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Trad_2009 c93fc718ad5e0584d456bd86f4417ab7 219 SUPERFAMILY SSF46785 85 165 1.73E-22 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Trad_2958 79556e5434c7fd0aae55cb1c52bfb091 158 Gene3D G3DSA:3.10.50.30 80 158 5.0E-18 T 15-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 Trad_2958 79556e5434c7fd0aae55cb1c52bfb091 158 Gene3D G3DSA:1.10.287.180 4 77 3.6E-24 T 15-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 Trad_2958 79556e5434c7fd0aae55cb1c52bfb091 158 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 86 155 1.0E-19 T 15-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 Trad_2958 79556e5434c7fd0aae55cb1c52bfb091 158 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 121 137 - T 15-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 Trad_2958 79556e5434c7fd0aae55cb1c52bfb091 158 SUPERFAMILY SSF54534 86 155 1.83E-15 T 15-10-2018 Trad_2958 79556e5434c7fd0aae55cb1c52bfb091 158 PIRSF PIRSF006092 1 158 7.1E-47 T 15-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 Trad_2958 79556e5434c7fd0aae55cb1c52bfb091 158 SUPERFAMILY SSF46557 5 78 1.57E-20 T 15-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 Trad_2958 79556e5434c7fd0aae55cb1c52bfb091 158 Pfam PF03449 Transcription elongation factor, N-terminal 6 76 5.9E-24 T 15-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 Trad_2958 79556e5434c7fd0aae55cb1c52bfb091 158 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 7 155 4.3E-46 T 15-10-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 Trad_2958 79556e5434c7fd0aae55cb1c52bfb091 158 Hamap MF_00105 Transcription elongation factor GreA [greA]. 4 156 25.053 T 15-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 Trad_2487 974b648ffc6f793050304dd2c0031804 182 Gene3D G3DSA:2.70.40.10 1 156 3.1E-48 T 15-10-2018 IPR036157 dUTPase-like superfamily Trad_2487 974b648ffc6f793050304dd2c0031804 182 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 17 181 2.6E-46 T 15-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 Trad_2487 974b648ffc6f793050304dd2c0031804 182 Hamap MF_00146 dCTP deaminase [dcd]. 2 182 27.105 T 15-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 Trad_2487 974b648ffc6f793050304dd2c0031804 182 Pfam PF00692 dUTPase 74 178 3.0E-8 T 15-10-2018 IPR029054 dUTPase-like Trad_2487 974b648ffc6f793050304dd2c0031804 182 SUPERFAMILY SSF51283 3 181 1.16E-46 T 15-10-2018 IPR036157 dUTPase-like superfamily Trad_1958 b87a67ef878261a1ace978e6fb8d1e2a 256 SMART SM00028 167 200 6.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Trad_1958 b87a67ef878261a1ace978e6fb8d1e2a 256 SMART SM00028 210 243 1.6E-5 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Trad_1958 b87a67ef878261a1ace978e6fb8d1e2a 256 SMART SM00028 98 131 89.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Trad_1958 b87a67ef878261a1ace978e6fb8d1e2a 256 Pfam PF13432 Tetratricopeptide repeat 90 129 0.0024 T 15-10-2018 Trad_1958 b87a67ef878261a1ace978e6fb8d1e2a 256 Pfam PF13432 Tetratricopeptide repeat 136 195 0.0016 T 15-10-2018 Trad_1958 b87a67ef878261a1ace978e6fb8d1e2a 256 Gene3D G3DSA:1.25.40.10 27 254 9.8E-28 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Trad_1958 b87a67ef878261a1ace978e6fb8d1e2a 256 SUPERFAMILY SSF48452 62 246 1.98E-21 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Trad_1958 b87a67ef878261a1ace978e6fb8d1e2a 256 Pfam PF07719 Tetratricopeptide repeat 211 242 4.7E-6 T 15-10-2018 IPR013105 Tetratricopeptide repeat 2 Trad_0318 b06a56371c25992e01cc767c9739b79c 195 SUPERFAMILY SSF53067 14 114 2.42E-23 T 15-10-2018 Trad_0318 b06a56371c25992e01cc767c9739b79c 195 Gene3D G3DSA:3.30.420.40 14 137 5.8E-29 T 15-10-2018 Trad_0318 b06a56371c25992e01cc767c9739b79c 195 Pfam PF00814 Glycoprotease family 41 160 1.6E-25 T 15-10-2018 IPR000905 Gcp-like domain Trad_0318 b06a56371c25992e01cc767c9739b79c 195 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 15 156 4.9E-39 T 15-10-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 Trad_0318 b06a56371c25992e01cc767c9739b79c 195 SUPERFAMILY SSF53067 123 189 2.01E-5 T 15-10-2018 Trad_1613 b0daccc4fd3ff2b4673aeebda4178e34 321 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 29 307 3.6E-68 T 15-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 Trad_1613 b0daccc4fd3ff2b4673aeebda4178e34 321 Gene3D G3DSA:3.40.50.620 17 188 4.8E-44 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Trad_1613 b0daccc4fd3ff2b4673aeebda4178e34 321 Pfam PF06574 FAD synthetase 25 162 1.3E-32 T 15-10-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 Trad_1613 b0daccc4fd3ff2b4673aeebda4178e34 321 Gene3D G3DSA:2.40.30.30 190 314 4.3E-37 T 15-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 Trad_1613 b0daccc4fd3ff2b4673aeebda4178e34 321 PIRSF PIRSF004491 16 312 4.1E-83 T 15-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 Trad_1613 b0daccc4fd3ff2b4673aeebda4178e34 321 SUPERFAMILY SSF52374 29 187 1.48E-23 T 15-10-2018 Trad_1613 b0daccc4fd3ff2b4673aeebda4178e34 321 SMART SM00904 185 308 2.0E-48 T 15-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 Trad_1613 b0daccc4fd3ff2b4673aeebda4178e34 321 Pfam PF01687 Riboflavin kinase 186 307 3.4E-31 T 15-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 Trad_1613 b0daccc4fd3ff2b4673aeebda4178e34 321 SUPERFAMILY SSF82114 176 309 1.18E-39 T 15-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 Trad_2762 e2af0b8c563aa501cffbcc70276a1433 165 Gene3D G3DSA:1.10.10.10 8 154 6.2E-34 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Trad_2762 e2af0b8c563aa501cffbcc70276a1433 165 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 11 144 3.2E-35 T 15-10-2018 IPR000944 Transcription regulator Rrf2-type Trad_2762 e2af0b8c563aa501cffbcc70276a1433 165 Pfam PF02082 Transcriptional regulator 11 93 2.9E-20 T 15-10-2018 IPR000944 Transcription regulator Rrf2-type Trad_2762 e2af0b8c563aa501cffbcc70276a1433 165 SUPERFAMILY SSF46785 12 148 1.05E-26 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Trad_2762 e2af0b8c563aa501cffbcc70276a1433 165 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 59 77 - T 15-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site Trad_2756 e8b23d69e72a369d0f268ef310a166ac 238 TIGRFAM TIGR00719 sda_beta: L-serine dehydratase, iron-sulfur-dependent, beta subunit 4 200 4.0E-63 T 15-10-2018 IPR004643 Iron-sulphur-dependent L-serine dehydratase beta subunit GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 Trad_2756 e8b23d69e72a369d0f268ef310a166ac 238 Pfam PF01842 ACT domain 144 196 9.3E-8 T 15-10-2018 IPR002912 ACT domain Trad_2756 e8b23d69e72a369d0f268ef310a166ac 238 SUPERFAMILY SSF143548 16 134 3.66E-30 T 15-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 Trad_2756 e8b23d69e72a369d0f268ef310a166ac 238 Gene3D G3DSA:3.30.70.260 144 214 2.9E-14 T 15-10-2018 Trad_2756 e8b23d69e72a369d0f268ef310a166ac 238 SUPERFAMILY SSF55021 133 214 8.1E-15 T 15-10-2018 Trad_2756 e8b23d69e72a369d0f268ef310a166ac 238 Gene3D G3DSA:3.30.1330.90 10 132 1.2E-19 T 15-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 Trad_2756 e8b23d69e72a369d0f268ef310a166ac 238 Pfam PF03315 Serine dehydratase beta chain 10 76 2.4E-12 T 15-10-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 Trad_2756 e8b23d69e72a369d0f268ef310a166ac 238 PIRSF PIRSF036692 1 216 5.2E-75 T 15-10-2018 IPR004643 Iron-sulphur-dependent L-serine dehydratase beta subunit GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 Trad_1031 15cd48ee588d99efd5917cdc2948ca4f 650 Gene3D G3DSA:3.20.20.80 102 564 1.1E-201 T 15-10-2018 Trad_1031 15cd48ee588d99efd5917cdc2948ca4f 650 Pfam PF00128 Alpha amylase, catalytic domain 112 318 1.3E-32 T 15-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Trad_1031 15cd48ee588d99efd5917cdc2948ca4f 650 Gene3D G3DSA:3.90.400.10 189 263 1.1E-201 T 15-10-2018 Trad_1031 15cd48ee588d99efd5917cdc2948ca4f 650 SMART SM00642 89 540 1.1E-32 T 15-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Trad_1031 15cd48ee588d99efd5917cdc2948ca4f 650 Gene3D G3DSA:2.60.40.1180 572 647 1.4E-8 T 15-10-2018 IPR013780 Glycosyl hydrolase, all-beta Trad_1031 15cd48ee588d99efd5917cdc2948ca4f 650 SUPERFAMILY SSF51445 24 567 6.29E-107 T 15-10-2018 IPR017853 Glycoside hydrolase superfamily Trad_1031 15cd48ee588d99efd5917cdc2948ca4f 650 SUPERFAMILY SSF51011 576 644 6.56E-11 T 15-10-2018 Trad_1031 15cd48ee588d99efd5917cdc2948ca4f 650 Gene3D G3DSA:1.10.1740.10 28 98 7.1E-20 T 15-10-2018 Trad_0064 dee2f4a3c92a74a80e601d92d9afec5e 314 Gene3D G3DSA:3.40.50.1370 13 142 5.9E-106 T 15-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 Trad_0064 dee2f4a3c92a74a80e601d92d9afec5e 314 Gene3D G3DSA:3.40.50.1370 143 307 5.9E-106 T 15-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 Trad_0064 dee2f4a3c92a74a80e601d92d9afec5e 314 PRINTS PR00102 Ornithine carbamoyltransferase signature 228 238 8.7E-24 T 15-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 Trad_0064 dee2f4a3c92a74a80e601d92d9afec5e 314 PRINTS PR00102 Ornithine carbamoyltransferase signature 129 143 8.7E-24 T 15-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 Trad_0064 dee2f4a3c92a74a80e601d92d9afec5e 314 PRINTS PR00102 Ornithine carbamoyltransferase signature 290 301 8.7E-24 T 15-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 Trad_0064 dee2f4a3c92a74a80e601d92d9afec5e 314 PRINTS PR00102 Ornithine carbamoyltransferase signature 56 70 8.7E-24 T 15-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 Trad_0064 dee2f4a3c92a74a80e601d92d9afec5e 314 PRINTS PR00102 Ornithine carbamoyltransferase signature 89 102 8.7E-24 T 15-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 Trad_0064 dee2f4a3c92a74a80e601d92d9afec5e 314 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 13 311 9.5E-107 T 15-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 Trad_0064 dee2f4a3c92a74a80e601d92d9afec5e 314 SUPERFAMILY SSF53671 9 312 1.57E-96 T 15-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 Trad_0064 dee2f4a3c92a74a80e601d92d9afec5e 314 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 159 309 4.5E-50 T 15-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 Trad_0064 dee2f4a3c92a74a80e601d92d9afec5e 314 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 13 153 5.0E-40 T 15-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 Trad_0064 dee2f4a3c92a74a80e601d92d9afec5e 314 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 140 151 1.5E-22 T 15-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Trad_0064 dee2f4a3c92a74a80e601d92d9afec5e 314 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 264 273 1.5E-22 T 15-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Trad_0064 dee2f4a3c92a74a80e601d92d9afec5e 314 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 58 77 1.5E-22 T 15-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Trad_0064 dee2f4a3c92a74a80e601d92d9afec5e 314 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 276 299 1.5E-22 T 15-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Trad_0064 dee2f4a3c92a74a80e601d92d9afec5e 314 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 12 312 71.309 T 15-10-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 Trad_0766 9abe4462069e2ff6f4a3321bd738b808 325 SUPERFAMILY SSF53613 16 321 6.39E-63 T 15-10-2018 IPR029056 Ribokinase-like Trad_0766 9abe4462069e2ff6f4a3321bd738b808 325 Pfam PF00294 pfkB family carbohydrate kinase 17 312 5.2E-46 T 15-10-2018 IPR011611 Carbohydrate kinase PfkB Trad_0766 9abe4462069e2ff6f4a3321bd738b808 325 PRINTS PR00990 Ribokinase signature 226 237 6.3E-6 T 15-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 Trad_0766 9abe4462069e2ff6f4a3321bd738b808 325 PRINTS PR00990 Ribokinase signature 36 55 6.3E-6 T 15-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 Trad_0766 9abe4462069e2ff6f4a3321bd738b808 325 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 256 269 - T 15-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 Trad_0766 9abe4462069e2ff6f4a3321bd738b808 325 Gene3D G3DSA:3.40.1190.20 14 325 1.2E-78 T 15-10-2018 IPR029056 Ribokinase-like Trad_2147 e49fb528b4e3dc1057fcbe34e0ebfaaa 651 Pfam PF00999 Sodium/hydrogen exchanger family 14 392 1.2E-58 T 15-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 Trad_2147 e49fb528b4e3dc1057fcbe34e0ebfaaa 651 Gene3D G3DSA:1.20.1530.20 4 395 3.4E-13 T 15-10-2018 IPR038770 Sodium/solute symporter superfamily Trad_0499 be83ac5ce26e2c80ad6df9e70043d689 108 Pfam PF00462 Glutaredoxin 10 57 4.1E-9 T 15-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 Trad_0499 be83ac5ce26e2c80ad6df9e70043d689 108 Gene3D G3DSA:3.40.30.10 9 93 4.8E-10 T 15-10-2018 Trad_0499 be83ac5ce26e2c80ad6df9e70043d689 108 SUPERFAMILY SSF52833 9 68 1.34E-10 T 15-10-2018 IPR036249 Thioredoxin-like superfamily Trad_2680 09207053f49a413add3bc6664a05aade 775 Pfam PF13244 Domain of unknown function (DUF4040) 606 670 9.0E-18 T 15-10-2018 IPR025383 Domain of unknown function DUF4040 Trad_2680 09207053f49a413add3bc6664a05aade 775 Gene3D G3DSA:1.20.120.1200 597 756 5.4E-8 T 15-10-2018 Trad_2680 09207053f49a413add3bc6664a05aade 775 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 302 314 1.1E-37 T 15-10-2018 Trad_2680 09207053f49a413add3bc6664a05aade 775 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 234 260 1.1E-37 T 15-10-2018 Trad_2680 09207053f49a413add3bc6664a05aade 775 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 212 233 1.1E-37 T 15-10-2018 Trad_2680 09207053f49a413add3bc6664a05aade 775 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 73 98 1.1E-37 T 15-10-2018 Trad_2680 09207053f49a413add3bc6664a05aade 775 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 101 121 1.1E-37 T 15-10-2018 Trad_2680 09207053f49a413add3bc6664a05aade 775 Pfam PF00361 Proton-conducting membrane transporter 124 408 1.6E-65 T 15-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Trad_2680 09207053f49a413add3bc6664a05aade 775 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 60 111 1.6E-13 T 15-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Trad_2396 81593583b671685c61f4177ac3f06757 151 Gene3D G3DSA:1.10.10.10 7 150 3.8E-29 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Trad_2396 81593583b671685c61f4177ac3f06757 151 SMART SM00347 39 136 1.6E-15 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Trad_2396 81593583b671685c61f4177ac3f06757 151 Pfam PF12802 MarR family 45 97 1.4E-12 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Trad_2396 81593583b671685c61f4177ac3f06757 151 SUPERFAMILY SSF46785 15 148 9.4E-30 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Trad_2396 81593583b671685c61f4177ac3f06757 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 126 146 5.0E-7 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Trad_2396 81593583b671685c61f4177ac3f06757 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 80 95 5.0E-7 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Trad_2396 81593583b671685c61f4177ac3f06757 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 63 79 5.0E-7 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Trad_2552 4412c01526419541beed236e22b28747 340 Gene3D G3DSA:3.40.50.720 10 309 7.3E-93 T 15-10-2018 Trad_2552 4412c01526419541beed236e22b28747 340 SUPERFAMILY SSF51735 10 151 1.32E-22 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_2552 4412c01526419541beed236e22b28747 340 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 175 197 - T 15-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 Trad_2552 4412c01526419541beed236e22b28747 340 PIRSF PIRSF036497 7 318 4.1E-75 T 15-10-2018 IPR022697 Homoserine dehydrogenase lacking ACT domain GO:0004412 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 Trad_2552 4412c01526419541beed236e22b28747 340 Pfam PF00742 Homoserine dehydrogenase 130 309 1.7E-51 T 15-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 Trad_2552 4412c01526419541beed236e22b28747 340 SUPERFAMILY SSF55347 130 296 1.31E-38 T 15-10-2018 Trad_2552 4412c01526419541beed236e22b28747 340 Gene3D G3DSA:3.30.360.10 140 292 7.3E-93 T 15-10-2018 Trad_2552 4412c01526419541beed236e22b28747 340 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 15 107 3.0E-14 T 15-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 Trad_2213 325543fa6b3286d8eedd8e9c4cdb14d5 358 Gene3D G3DSA:3.30.390.10 3 116 2.8E-73 T 15-10-2018 IPR029017 Enolase-like, N-terminal Trad_2213 325543fa6b3286d8eedd8e9c4cdb14d5 358 Pfam PF13378 Enolase C-terminal domain-like 147 345 1.9E-30 T 15-10-2018 IPR029065 Enolase C-terminal domain-like Trad_2213 325543fa6b3286d8eedd8e9c4cdb14d5 358 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 189 220 - T 15-10-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 Trad_2213 325543fa6b3286d8eedd8e9c4cdb14d5 358 SUPERFAMILY SSF54826 3 121 1.38E-17 T 15-10-2018 Trad_2213 325543fa6b3286d8eedd8e9c4cdb14d5 358 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 31 116 6.6E-5 T 15-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain Trad_2213 325543fa6b3286d8eedd8e9c4cdb14d5 358 SMART SM00922 142 239 6.1E-15 T 15-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal Trad_2213 325543fa6b3286d8eedd8e9c4cdb14d5 358 Gene3D G3DSA:3.20.20.120 117 345 2.8E-73 T 15-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Trad_2213 325543fa6b3286d8eedd8e9c4cdb14d5 358 SUPERFAMILY SSF51604 128 345 4.63E-42 T 15-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Trad_0955 ef97071307cfffb3c7c86563a3b3ca54 168 Gene3D G3DSA:1.20.120.450 3 157 3.2E-18 T 15-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes Trad_0955 ef97071307cfffb3c7c86563a3b3ca54 168 Pfam PF05163 DinB family 9 162 1.7E-17 T 15-10-2018 IPR007837 DNA damage-inducible protein DinB Trad_0955 ef97071307cfffb3c7c86563a3b3ca54 168 SUPERFAMILY SSF109854 5 149 5.8E-19 T 15-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes Trad_2152 bf77b9ac531be8a71493ff1dff13c063 208 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 1 178 23.047 T 15-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 Trad_2152 bf77b9ac531be8a71493ff1dff13c063 208 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 3 175 1.5E-37 T 15-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 Trad_2152 bf77b9ac531be8a71493ff1dff13c063 208 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 93 178 9.5E-21 T 15-10-2018 IPR020057 Ribosomal protein L25, beta domain Trad_2152 bf77b9ac531be8a71493ff1dff13c063 208 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 9 88 2.0E-17 T 15-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 Trad_2152 bf77b9ac531be8a71493ff1dff13c063 208 Gene3D G3DSA:2.40.240.10 1 88 1.2E-30 T 15-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Trad_2152 bf77b9ac531be8a71493ff1dff13c063 208 SUPERFAMILY SSF50715 2 184 5.41E-45 T 15-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Trad_2152 bf77b9ac531be8a71493ff1dff13c063 208 Gene3D G3DSA:2.170.120.20 91 184 1.0E-23 T 15-10-2018 IPR037121 Ribosomal protein L25, C-terminal Trad_2152 bf77b9ac531be8a71493ff1dff13c063 208 Pfam PF01386 Ribosomal L25p family 3 85 9.8E-19 T 15-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 Trad_0108 12a6ff60ae010a5d46663359f4d149b5 183 SUPERFAMILY SSF54637 59 177 4.12E-39 T 15-10-2018 IPR029069 HotDog domain superfamily Trad_0108 12a6ff60ae010a5d46663359f4d149b5 183 Gene3D G3DSA:3.10.129.10 49 181 1.4E-43 T 15-10-2018 Trad_0108 12a6ff60ae010a5d46663359f4d149b5 183 Pfam PF03061 Thioesterase superfamily 75 147 5.8E-19 T 15-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 Trad_1148 84c80d1badf9da4151e5043ce60e41df 165 Pfam PF01883 Iron-sulfur cluster assembly protein 13 74 1.8E-17 T 15-10-2018 IPR002744 MIP18 family-like Trad_1148 84c80d1badf9da4151e5043ce60e41df 165 Gene3D G3DSA:3.30.300.130 3 105 9.5E-26 T 15-10-2018 IPR034904 Fe-S cluster assembly domain superfamily Trad_1148 84c80d1badf9da4151e5043ce60e41df 165 TIGRFAM TIGR02159 PA_CoA_Oxy4: phenylacetate-CoA oxygenase, PaaJ subunit 22 165 1.7E-53 T 15-10-2018 IPR011883 Phenylacetate-CoA oxygenase, PaaJ subunit Trad_1148 84c80d1badf9da4151e5043ce60e41df 165 SUPERFAMILY SSF117916 10 103 3.27E-23 T 15-10-2018 IPR034904 Fe-S cluster assembly domain superfamily Trad_1937 f671ce092bcb1e8666237420e02aa60a 244 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 3 217 2.9E-53 T 15-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Trad_1937 f671ce092bcb1e8666237420e02aa60a 244 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 1 229 16.038 T 15-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Trad_1937 f671ce092bcb1e8666237420e02aa60a 244 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 93 119 8.5E-35 T 15-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Trad_1937 f671ce092bcb1e8666237420e02aa60a 244 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 75 93 8.5E-35 T 15-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Trad_1937 f671ce092bcb1e8666237420e02aa60a 244 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 144 172 8.5E-35 T 15-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Trad_1937 f671ce092bcb1e8666237420e02aa60a 244 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 2 29 8.5E-35 T 15-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Trad_1937 f671ce092bcb1e8666237420e02aa60a 244 Pfam PF00902 Sec-independent protein translocase protein (TatC) 5 212 7.3E-58 T 15-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Trad_1005 f0d8b272b3d0bc28aa2c0ddd9e7338d2 407 SUPERFAMILY SSF63411 224 396 6.22E-29 T 15-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 Trad_1005 f0d8b272b3d0bc28aa2c0ddd9e7338d2 407 SUPERFAMILY SSF63411 3 204 4.03E-55 T 15-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 Trad_1005 f0d8b272b3d0bc28aa2c0ddd9e7338d2 407 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 34 57 - T 15-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 Trad_1005 f0d8b272b3d0bc28aa2c0ddd9e7338d2 407 Gene3D G3DSA:3.30.830.10 3 213 7.1E-75 T 15-10-2018 Trad_1005 f0d8b272b3d0bc28aa2c0ddd9e7338d2 407 Gene3D G3DSA:3.30.830.10 230 395 5.5E-31 T 15-10-2018 Trad_1005 f0d8b272b3d0bc28aa2c0ddd9e7338d2 407 Pfam PF05193 Peptidase M16 inactive domain 166 339 1.3E-28 T 15-10-2018 IPR007863 Peptidase M16, C-terminal Trad_1005 f0d8b272b3d0bc28aa2c0ddd9e7338d2 407 Pfam PF00675 Insulinase (Peptidase family M16) 14 158 2.3E-35 T 15-10-2018 IPR011765 Peptidase M16, N-terminal Trad_2484 2b5632f6165c0e849bc0f621bdb75dbc 405 Pfam PF03143 Elongation factor Tu C-terminal domain 309 403 2.2E-33 T 15-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal Trad_2484 2b5632f6165c0e849bc0f621bdb75dbc 405 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 5.4E-16 T 15-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Trad_2484 2b5632f6165c0e849bc0f621bdb75dbc 405 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 405 3.2E-226 T 15-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Trad_2484 2b5632f6165c0e849bc0f621bdb75dbc 405 Gene3D G3DSA:3.40.50.300 2 214 5.1E-68 T 15-10-2018 Trad_2484 2b5632f6165c0e849bc0f621bdb75dbc 405 SUPERFAMILY SSF52540 6 230 1.01E-63 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_2484 2b5632f6165c0e849bc0f621bdb75dbc 405 SUPERFAMILY SSF50465 309 404 6.04E-35 T 15-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal Trad_2484 2b5632f6165c0e849bc0f621bdb75dbc 405 PRINTS PR00315 GTP-binding elongation factor signature 132 141 3.3E-24 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Trad_2484 2b5632f6165c0e849bc0f621bdb75dbc 405 PRINTS PR00315 GTP-binding elongation factor signature 79 89 3.3E-24 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Trad_2484 2b5632f6165c0e849bc0f621bdb75dbc 405 PRINTS PR00315 GTP-binding elongation factor signature 95 106 3.3E-24 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Trad_2484 2b5632f6165c0e849bc0f621bdb75dbc 405 PRINTS PR00315 GTP-binding elongation factor signature 14 27 3.3E-24 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Trad_2484 2b5632f6165c0e849bc0f621bdb75dbc 405 PRINTS PR00315 GTP-binding elongation factor signature 59 67 3.3E-24 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Trad_2484 2b5632f6165c0e849bc0f621bdb75dbc 405 SUPERFAMILY SSF50447 216 312 5.5E-31 T 15-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Trad_2484 2b5632f6165c0e849bc0f621bdb75dbc 405 Pfam PF03144 Elongation factor Tu domain 2 236 304 2.5E-16 T 15-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 Trad_2484 2b5632f6165c0e849bc0f621bdb75dbc 405 Gene3D G3DSA:2.40.30.10 349 404 3.4E-29 T 15-10-2018 Trad_2484 2b5632f6165c0e849bc0f621bdb75dbc 405 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 405 60.809 T 15-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Trad_2484 2b5632f6165c0e849bc0f621bdb75dbc 405 Pfam PF00009 Elongation factor Tu GTP binding domain 10 212 2.6E-60 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Trad_2484 2b5632f6165c0e849bc0f621bdb75dbc 405 Gene3D G3DSA:2.40.30.10 217 345 2.8E-53 T 15-10-2018 Trad_2484 2b5632f6165c0e849bc0f621bdb75dbc 405 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 52 67 - T 15-10-2018 IPR031157 Tr-type G domain, conserved site Trad_1036 2b5632f6165c0e849bc0f621bdb75dbc 405 Pfam PF03143 Elongation factor Tu C-terminal domain 309 403 2.2E-33 T 15-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal Trad_1036 2b5632f6165c0e849bc0f621bdb75dbc 405 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 5.4E-16 T 15-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Trad_1036 2b5632f6165c0e849bc0f621bdb75dbc 405 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 405 3.2E-226 T 15-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Trad_1036 2b5632f6165c0e849bc0f621bdb75dbc 405 Gene3D G3DSA:3.40.50.300 2 214 5.1E-68 T 15-10-2018 Trad_1036 2b5632f6165c0e849bc0f621bdb75dbc 405 SUPERFAMILY SSF52540 6 230 1.01E-63 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_1036 2b5632f6165c0e849bc0f621bdb75dbc 405 SUPERFAMILY SSF50465 309 404 6.04E-35 T 15-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal Trad_1036 2b5632f6165c0e849bc0f621bdb75dbc 405 PRINTS PR00315 GTP-binding elongation factor signature 132 141 3.3E-24 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Trad_1036 2b5632f6165c0e849bc0f621bdb75dbc 405 PRINTS PR00315 GTP-binding elongation factor signature 79 89 3.3E-24 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Trad_1036 2b5632f6165c0e849bc0f621bdb75dbc 405 PRINTS PR00315 GTP-binding elongation factor signature 95 106 3.3E-24 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Trad_1036 2b5632f6165c0e849bc0f621bdb75dbc 405 PRINTS PR00315 GTP-binding elongation factor signature 14 27 3.3E-24 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Trad_1036 2b5632f6165c0e849bc0f621bdb75dbc 405 PRINTS PR00315 GTP-binding elongation factor signature 59 67 3.3E-24 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Trad_1036 2b5632f6165c0e849bc0f621bdb75dbc 405 SUPERFAMILY SSF50447 216 312 5.5E-31 T 15-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Trad_1036 2b5632f6165c0e849bc0f621bdb75dbc 405 Pfam PF03144 Elongation factor Tu domain 2 236 304 2.5E-16 T 15-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 Trad_1036 2b5632f6165c0e849bc0f621bdb75dbc 405 Gene3D G3DSA:2.40.30.10 349 404 3.4E-29 T 15-10-2018 Trad_1036 2b5632f6165c0e849bc0f621bdb75dbc 405 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 405 60.809 T 15-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Trad_1036 2b5632f6165c0e849bc0f621bdb75dbc 405 Pfam PF00009 Elongation factor Tu GTP binding domain 10 212 2.6E-60 T 15-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Trad_1036 2b5632f6165c0e849bc0f621bdb75dbc 405 Gene3D G3DSA:2.40.30.10 217 345 2.8E-53 T 15-10-2018 Trad_1036 2b5632f6165c0e849bc0f621bdb75dbc 405 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 52 67 - T 15-10-2018 IPR031157 Tr-type G domain, conserved site Trad_2832 d201272f9eaa3cf5fa336aa948215b64 426 SMART SM00941 337 411 1.8E-26 T 15-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 Trad_2832 d201272f9eaa3cf5fa336aa948215b64 426 SUPERFAMILY SSF54680 324 424 6.54E-25 T 15-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 Trad_2832 d201272f9eaa3cf5fa336aa948215b64 426 Pfam PF02885 Glycosyl transferase family, helical bundle domain 5 66 1.4E-22 T 15-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 Trad_2832 d201272f9eaa3cf5fa336aa948215b64 426 SUPERFAMILY SSF47648 1 68 3.27E-20 T 15-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 Trad_2832 d201272f9eaa3cf5fa336aa948215b64 426 Gene3D G3DSA:3.40.1030.10 78 325 9.8E-139 T 15-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 Trad_2832 d201272f9eaa3cf5fa336aa948215b64 426 Gene3D G3DSA:3.90.1170.30 326 409 9.8E-139 T 15-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 Trad_2832 d201272f9eaa3cf5fa336aa948215b64 426 Pfam PF00591 Glycosyl transferase family, a/b domain 76 300 1.5E-37 T 15-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 Trad_2832 d201272f9eaa3cf5fa336aa948215b64 426 TIGRFAM TIGR02644 Y_phosphoryl: pyrimidine-nucleoside phosphorylase 4 409 3.4E-161 T 15-10-2018 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic GO:0006213|GO:0016154 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|Reactome: R-HSA-73614|Reactome: R-HSA-73621 Trad_2832 d201272f9eaa3cf5fa336aa948215b64 426 Gene3D G3DSA:1.20.970.10 1 67 8.9E-28 T 15-10-2018 Trad_2832 d201272f9eaa3cf5fa336aa948215b64 426 SUPERFAMILY SSF52418 76 321 1.09E-83 T 15-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 Trad_2832 d201272f9eaa3cf5fa336aa948215b64 426 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 337 409 1.2E-20 T 15-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 Trad_2832 d201272f9eaa3cf5fa336aa948215b64 426 ProSitePatterns PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature. 109 124 - T 15-10-2018 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 Trad_2832 d201272f9eaa3cf5fa336aa948215b64 426 PIRSF PIRSF000478 1 425 9.6E-158 T 15-10-2018 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 Trad_0284 77724a1fdd09e922587522050340ac4f 350 TIGRFAM TIGR03886 lyase_spl_fam: spore photoproduct lyase family protein 4 350 1.8E-178 T 15-10-2018 IPR023805 Uncharacterised protein family, spore photo-product lyase-related Trad_0284 77724a1fdd09e922587522050340ac4f 350 Gene3D G3DSA:3.40.50.12110 2 115 2.2E-24 T 15-10-2018 Trad_0284 77724a1fdd09e922587522050340ac4f 350 Gene3D G3DSA:3.80.30.30 129 350 1.5E-46 T 15-10-2018 Trad_2918 e13c12d37e4d41ad3f4ed78ecd62a60f 155 SUPERFAMILY SSF49764 27 152 2.24E-30 T 15-10-2018 IPR008978 HSP20-like chaperone Trad_2918 e13c12d37e4d41ad3f4ed78ecd62a60f 155 Gene3D G3DSA:2.60.40.790 16 153 1.1E-31 T 15-10-2018 IPR008978 HSP20-like chaperone Trad_2918 e13c12d37e4d41ad3f4ed78ecd62a60f 155 Pfam PF00011 Hsp20/alpha crystallin family 56 152 7.8E-20 T 15-10-2018 IPR002068 Alpha crystallin/Hsp20 domain Trad_2173 f3c3edc131be25d96e0389fb58f1c4fa 287 Pfam PF00795 Carbon-nitrogen hydrolase 5 263 1.6E-33 T 15-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 Trad_2173 f3c3edc131be25d96e0389fb58f1c4fa 287 SUPERFAMILY SSF56317 2 273 6.02E-57 T 15-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Trad_2173 f3c3edc131be25d96e0389fb58f1c4fa 287 Gene3D G3DSA:3.60.110.10 1 284 1.6E-62 T 15-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Trad_2740 88de31d036cdb3dac5fec8efa085b3e2 718 SUPERFAMILY SSF48179 498 601 2.47E-26 T 15-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Trad_2740 88de31d036cdb3dac5fec8efa085b3e2 718 SUPERFAMILY SSF51735 317 498 3.3E-50 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_2740 88de31d036cdb3dac5fec8efa085b3e2 718 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 499 593 4.6E-25 T 15-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 Trad_2740 88de31d036cdb3dac5fec8efa085b3e2 718 Gene3D G3DSA:3.90.226.10 6 311 1.8E-93 T 15-10-2018 Trad_2740 88de31d036cdb3dac5fec8efa085b3e2 718 Gene3D G3DSA:1.10.1040.50 502 716 1.2E-67 T 15-10-2018 Trad_2740 88de31d036cdb3dac5fec8efa085b3e2 718 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 319 496 3.0E-53 T 15-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 Trad_2740 88de31d036cdb3dac5fec8efa085b3e2 718 SUPERFAMILY SSF48179 619 711 2.81E-24 T 15-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Trad_2740 88de31d036cdb3dac5fec8efa085b3e2 718 Pfam PF00378 Enoyl-CoA hydratase/isomerase 12 204 4.2E-40 T 15-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 Trad_2740 88de31d036cdb3dac5fec8efa085b3e2 718 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 103 123 - T 15-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 Trad_2740 88de31d036cdb3dac5fec8efa085b3e2 718 SUPERFAMILY SSF52096 1 308 2.78E-70 T 15-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Trad_2740 88de31d036cdb3dac5fec8efa085b3e2 718 Gene3D G3DSA:3.40.50.720 312 501 5.9E-59 T 15-10-2018 Trad_0863 f6c1d9ce01dead65d78413ac11bc0eff 604 SUPERFAMILY SSF50475 2 319 1.29E-112 T 15-10-2018 Trad_0863 f6c1d9ce01dead65d78413ac11bc0eff 604 Gene3D G3DSA:3.40.1670.10 334 449 5.0E-23 T 15-10-2018 Trad_0863 f6c1d9ce01dead65d78413ac11bc0eff 604 Gene3D G3DSA:3.40.1670.10 468 575 2.3E-8 T 15-10-2018 Trad_0863 f6c1d9ce01dead65d78413ac11bc0eff 604 TIGRFAM TIGR03701 mena_SCO4490: menaquinone biosynthesis decarboxylase, SCO4490 family 7 442 3.1E-184 T 15-10-2018 IPR022390 4-hydroxybenzoate decarboxylase subunit C GO:0016831 Trad_0863 f6c1d9ce01dead65d78413ac11bc0eff 604 SUPERFAMILY SSF143968 320 460 1.7E-32 T 15-10-2018 Trad_0863 f6c1d9ce01dead65d78413ac11bc0eff 604 SUPERFAMILY SSF143968 486 597 2.88E-17 T 15-10-2018 Trad_0863 f6c1d9ce01dead65d78413ac11bc0eff 604 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 488 553 5.9E-7 T 15-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 Trad_0863 f6c1d9ce01dead65d78413ac11bc0eff 604 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 10 425 6.9E-153 T 15-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 Trad_0863 f6c1d9ce01dead65d78413ac11bc0eff 604 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 6 450 1.4E-120 T 15-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 Trad_2613 05c8557c081394ad6f21feafd0d24010 262 Pfam PF12706 Beta-lactamase superfamily domain 51 235 3.8E-25 T 15-10-2018 IPR001279 Metallo-beta-lactamase Trad_2613 05c8557c081394ad6f21feafd0d24010 262 SMART SM00849 40 235 5.0E-5 T 15-10-2018 IPR001279 Metallo-beta-lactamase Trad_2613 05c8557c081394ad6f21feafd0d24010 262 SUPERFAMILY SSF56281 7 261 9.04E-33 T 15-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Trad_2613 05c8557c081394ad6f21feafd0d24010 262 Gene3D G3DSA:3.60.15.10 6 261 4.6E-53 T 15-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Trad_2748 05d5f2a7aa30aaa49e0fc18ef1c2001d 315 Pfam PF07885 Ion channel 70 152 1.7E-6 T 15-10-2018 IPR013099 Potassium channel domain Trad_2748 05d5f2a7aa30aaa49e0fc18ef1c2001d 315 SUPERFAMILY SSF81324 59 151 3.66E-8 T 15-10-2018 Trad_2748 05d5f2a7aa30aaa49e0fc18ef1c2001d 315 Gene3D G3DSA:1.10.287.70 38 154 6.7E-7 T 15-10-2018 Trad_1358 8bc2e11d1f10dd44b1314932d640651d 277 Pfam PF13432 Tetratricopeptide repeat 139 195 9.0E-11 T 15-10-2018 Trad_1358 8bc2e11d1f10dd44b1314932d640651d 277 Pfam PF13181 Tetratricopeptide repeat 201 228 0.011 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Trad_1358 8bc2e11d1f10dd44b1314932d640651d 277 Gene3D G3DSA:1.25.40.10 105 246 2.3E-23 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Trad_1358 8bc2e11d1f10dd44b1314932d640651d 277 SUPERFAMILY SSF48452 131 234 8.22E-21 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Trad_1358 8bc2e11d1f10dd44b1314932d640651d 277 SMART SM00028 201 234 0.069 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Trad_1358 8bc2e11d1f10dd44b1314932d640651d 277 SMART SM00028 167 200 0.0032 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Trad_1358 8bc2e11d1f10dd44b1314932d640651d 277 SMART SM00028 133 166 0.36 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Trad_1598 c58aaae38ca517720869199f6327166d 142 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 1 137 6.0E-51 T 15-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 Trad_1598 c58aaae38ca517720869199f6327166d 142 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 2 128 3.0E-36 T 15-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 Trad_1598 c58aaae38ca517720869199f6327166d 142 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 142 43.477 T 15-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 Trad_1598 c58aaae38ca517720869199f6327166d 142 SUPERFAMILY SSF89447 1 128 5.61E-43 T 15-10-2018 IPR037914 SpoVT-AbrB domain superfamily Trad_1598 c58aaae38ca517720869199f6327166d 142 Gene3D G3DSA:2.40.330.20 1 139 1.1E-42 T 15-10-2018 IPR038619 MraZ superfamily Trad_1598 c58aaae38ca517720869199f6327166d 142 Pfam PF02381 MraZ protein, putative antitoxin-like 4 70 5.9E-17 T 15-10-2018 IPR020603 MraZ domain Trad_1598 c58aaae38ca517720869199f6327166d 142 Pfam PF02381 MraZ protein, putative antitoxin-like 72 128 4.9E-14 T 15-10-2018 IPR020603 MraZ domain Trad_0182 822a1def7eeb3daad5c296fd3c2666bd 483 Pfam PF02638 Glycosyl hydrolase-like 10 56 338 3.2E-31 T 15-10-2018 IPR003790 Glycosyl hydrolase-like 10 Trad_0182 822a1def7eeb3daad5c296fd3c2666bd 483 SUPERFAMILY SSF51445 56 351 1.01E-19 T 15-10-2018 IPR017853 Glycoside hydrolase superfamily Trad_2295 cbe5c30c5fcdb21e99553cfef8a199e9 509 SUPERFAMILY SSF52540 3 226 7.84E-56 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_2295 cbe5c30c5fcdb21e99553cfef8a199e9 509 Gene3D G3DSA:3.40.50.300 1 243 6.3E-57 T 15-10-2018 Trad_2295 cbe5c30c5fcdb21e99553cfef8a199e9 509 SMART SM00382 29 217 3.5E-9 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_2295 cbe5c30c5fcdb21e99553cfef8a199e9 509 SMART SM00382 276 470 0.24 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_2295 cbe5c30c5fcdb21e99553cfef8a199e9 509 Pfam PF00005 ABC transporter 20 169 1.3E-26 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Trad_2295 cbe5c30c5fcdb21e99553cfef8a199e9 509 Gene3D G3DSA:3.40.50.300 260 508 8.9E-40 T 15-10-2018 Trad_2295 cbe5c30c5fcdb21e99553cfef8a199e9 509 ProSitePatterns PS00211 ABC transporters family signature. 394 408 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Trad_2295 cbe5c30c5fcdb21e99553cfef8a199e9 509 Pfam PF00005 ABC transporter 268 421 2.0E-17 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Trad_2295 cbe5c30c5fcdb21e99553cfef8a199e9 509 SUPERFAMILY SSF52540 267 478 4.39E-41 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_1633 310c689b5131747728de53d25b043709 492 SMART SM01329 16 347 1.2E-157 T 15-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 Trad_1633 310c689b5131747728de53d25b043709 492 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 17 347 3.4E-93 T 15-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 Trad_1633 310c689b5131747728de53d25b043709 492 Gene3D G3DSA:3.30.70.1570 381 492 2.0E-36 T 15-10-2018 Trad_1633 310c689b5131747728de53d25b043709 492 Gene3D G3DSA:3.40.718.10 3 379 3.0E-131 T 15-10-2018 Trad_1633 310c689b5131747728de53d25b043709 492 TIGRFAM TIGR02924 ICDH_alpha: isocitrate dehydrogenase 16 486 6.5E-218 T 15-10-2018 IPR014273 Isocitrate dehydrogenase, alphaproteobacteria-type GO:0004450|GO:0006097|GO:0006099|GO:0046872|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 Trad_1633 310c689b5131747728de53d25b043709 492 SUPERFAMILY SSF53659 13 351 4.14E-116 T 15-10-2018 Trad_1633 310c689b5131747728de53d25b043709 492 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 238 257 - T 15-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 Trad_0559 d80cae30cdc48386d83784b1d18999da 224 SUPERFAMILY SSF102588 3 222 2.35E-58 T 15-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 Trad_0559 d80cae30cdc48386d83784b1d18999da 224 TIGRFAM TIGR04001 thiol_BshB1: bacillithiol biosynthesis deacetylase BshB1 2 219 4.1E-64 T 15-10-2018 IPR023842 Bacillithiol biosynthesis deacetylase, BshB1 GO:0019213|GO:0071793 Trad_0559 d80cae30cdc48386d83784b1d18999da 224 Pfam PF02585 GlcNAc-PI de-N-acetylase 5 121 1.3E-24 T 15-10-2018 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related Reactome: R-HSA-162710 Trad_0559 d80cae30cdc48386d83784b1d18999da 224 Gene3D G3DSA:3.40.50.10320 1 224 6.7E-79 T 15-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 Trad_0230 6ed14f001c7bf23e6ebe2aa8da34e728 505 Pfam PF07690 Major Facilitator Superfamily 90 317 8.9E-14 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Trad_0230 6ed14f001c7bf23e6ebe2aa8da34e728 505 SUPERFAMILY SSF103473 83 467 2.62E-41 T 15-10-2018 IPR036259 MFS transporter superfamily Trad_0230 6ed14f001c7bf23e6ebe2aa8da34e728 505 Gene3D G3DSA:1.20.1250.20 74 472 3.8E-32 T 15-10-2018 Trad_1413 6ce33eb24483dfcb805339834d81b637 427 Pfam PF01425 Amidase 63 385 2.3E-57 T 15-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Trad_1413 6ce33eb24483dfcb805339834d81b637 427 SUPERFAMILY SSF75304 3 379 3.4E-82 T 15-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Trad_1413 6ce33eb24483dfcb805339834d81b637 427 ProSitePatterns PS00571 Amidases signature. 151 182 - T 15-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 Trad_1413 6ce33eb24483dfcb805339834d81b637 427 Gene3D G3DSA:3.90.1300.10 4 412 2.7E-91 T 15-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Trad_2718 5f2657690cc82bebaf6701597c8bfe2c 384 SUPERFAMILY SSF53187 17 383 2.77E-47 T 15-10-2018 Trad_2718 5f2657690cc82bebaf6701597c8bfe2c 384 Pfam PF07687 Peptidase dimerisation domain 189 283 9.7E-19 T 15-10-2018 IPR011650 Peptidase M20, dimerisation domain Trad_2718 5f2657690cc82bebaf6701597c8bfe2c 384 Pfam PF01546 Peptidase family M20/M25/M40 87 383 1.4E-25 T 15-10-2018 IPR002933 Peptidase M20 GO:0016787 Trad_2718 5f2657690cc82bebaf6701597c8bfe2c 384 PIRSF PIRSF037238 9 384 2.5E-125 T 15-10-2018 IPR017150 Peptidase M20, glutamate carboxypeptidase Trad_2718 5f2657690cc82bebaf6701597c8bfe2c 384 SUPERFAMILY SSF55031 192 286 5.76E-20 T 15-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain Trad_2718 5f2657690cc82bebaf6701597c8bfe2c 384 Gene3D G3DSA:3.30.70.360 192 299 1.1E-109 T 15-10-2018 Trad_2718 5f2657690cc82bebaf6701597c8bfe2c 384 Gene3D G3DSA:3.40.630.10 24 373 1.1E-109 T 15-10-2018 Trad_1028 b98f7189cd310002984c7edb0f7a6e69 356 Gene3D G3DSA:3.90.870.10 2 211 4.3E-75 T 15-10-2018 Trad_1028 b98f7189cd310002984c7edb0f7a6e69 356 PIRSF PIRSF004930 3 352 3.4E-94 T 15-10-2018 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 Trad_1028 b98f7189cd310002984c7edb0f7a6e69 356 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 8 206 2.4E-55 T 15-10-2018 IPR006070 YrdC-like domain GO:0003725 Trad_1028 b98f7189cd310002984c7edb0f7a6e69 356 SUPERFAMILY SSF55821 8 207 8.24E-62 T 15-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily Trad_1028 b98f7189cd310002984c7edb0f7a6e69 356 Pfam PF03481 Putative GTP-binding controlling metal-binding 215 346 6.7E-16 T 15-10-2018 IPR005145 Putative GTP-binding controlling metal-binding domain Trad_1028 b98f7189cd310002984c7edb0f7a6e69 356 Pfam PF01300 Telomere recombination 17 197 1.3E-54 T 15-10-2018 IPR006070 YrdC-like domain GO:0003725 Trad_1028 b98f7189cd310002984c7edb0f7a6e69 356 Gene3D G3DSA:3.40.50.11030 223 352 1.0E-9 T 15-10-2018 IPR038385 Threonylcarbamoyl-AMP synthase, C-terminal domain superfamily Trad_1488 b3128fe40a41000a2d033adb37666745 217 SUPERFAMILY SSF53639 5 211 1.1E-56 T 15-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily Trad_1488 b3128fe40a41000a2d033adb37666745 217 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 10 186 8.6E-43 T 15-10-2018 IPR001303 Class II aldolase/adducin N-terminal Trad_1488 b3128fe40a41000a2d033adb37666745 217 SMART SM01007 9 188 3.9E-59 T 15-10-2018 IPR001303 Class II aldolase/adducin N-terminal Trad_1488 b3128fe40a41000a2d033adb37666745 217 Gene3D G3DSA:3.40.225.10 2 217 7.6E-63 T 15-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily Trad_0438 6e1eba9ffa5355fc601b9d52703b6ee2 199 Gene3D G3DSA:3.30.230.40 97 199 1.8E-31 T 15-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 Trad_0438 6e1eba9ffa5355fc601b9d52703b6ee2 199 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 38 181 5.4E-55 T 15-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 Trad_0438 6e1eba9ffa5355fc601b9d52703b6ee2 199 Gene3D G3DSA:3.30.230.40 1 96 1.5E-31 T 15-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 Trad_0438 6e1eba9ffa5355fc601b9d52703b6ee2 199 SUPERFAMILY SSF54211 94 186 1.14E-28 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Trad_0438 6e1eba9ffa5355fc601b9d52703b6ee2 199 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 68 81 - T 15-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 Trad_0438 6e1eba9ffa5355fc601b9d52703b6ee2 199 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 9 199 37.368 T 15-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 Trad_0438 6e1eba9ffa5355fc601b9d52703b6ee2 199 SUPERFAMILY SSF54211 9 93 6.96E-27 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Trad_0438 6e1eba9ffa5355fc601b9d52703b6ee2 199 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 163 175 - T 15-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 Trad_0770 4ec1df856854622148fd8a024f20deae 248 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 9 243 1.5E-54 T 15-10-2018 Trad_0770 4ec1df856854622148fd8a024f20deae 248 SUPERFAMILY SSF51735 1 244 5.04E-73 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_0770 4ec1df856854622148fd8a024f20deae 248 Gene3D G3DSA:3.40.50.720 1 245 1.3E-79 T 15-10-2018 Trad_0770 4ec1df856854622148fd8a024f20deae 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 123 139 5.1E-40 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_0770 4ec1df856854622148fd8a024f20deae 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 5.1E-40 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_0770 4ec1df856854622148fd8a024f20deae 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 170 187 5.1E-40 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_0770 4ec1df856854622148fd8a024f20deae 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 1 16 5.1E-40 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_0770 4ec1df856854622148fd8a024f20deae 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 5.1E-40 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_0770 4ec1df856854622148fd8a024f20deae 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 149 168 5.1E-40 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_0770 4ec1df856854622148fd8a024f20deae 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 3.2E-8 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_0770 4ec1df856854622148fd8a024f20deae 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 149 168 3.2E-8 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_0770 4ec1df856854622148fd8a024f20deae 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 129 137 3.2E-8 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_0617 470cabc6c0029dda6656a7cab1923e87 368 Gene3D G3DSA:1.10.3720.10 19 94 3.0E-7 T 15-10-2018 IPR035906 MetI-like superfamily Trad_0617 470cabc6c0029dda6656a7cab1923e87 368 SUPERFAMILY SSF161098 27 84 6.38E-7 T 15-10-2018 IPR035906 MetI-like superfamily Trad_0617 470cabc6c0029dda6656a7cab1923e87 368 Gene3D G3DSA:1.10.3720.10 130 366 1.9E-54 T 15-10-2018 IPR035906 MetI-like superfamily Trad_0617 470cabc6c0029dda6656a7cab1923e87 368 SUPERFAMILY SSF161098 135 357 7.19E-48 T 15-10-2018 IPR035906 MetI-like superfamily Trad_0617 470cabc6c0029dda6656a7cab1923e87 368 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 163 357 7.4E-12 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Trad_2039 17899b2076c6b9fedab0c13271c68ca2 397 PRINTS PR00181 Maltose binding protein signature 355 374 6.5E-5 T 15-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 Trad_2039 17899b2076c6b9fedab0c13271c68ca2 397 PRINTS PR00181 Maltose binding protein signature 125 144 6.5E-5 T 15-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 Trad_2039 17899b2076c6b9fedab0c13271c68ca2 397 PRINTS PR00181 Maltose binding protein signature 232 251 6.5E-5 T 15-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 Trad_2039 17899b2076c6b9fedab0c13271c68ca2 397 Gene3D G3DSA:3.40.190.10 37 355 4.7E-106 T 15-10-2018 Trad_2039 17899b2076c6b9fedab0c13271c68ca2 397 SUPERFAMILY SSF53850 22 392 1.43E-74 T 15-10-2018 Trad_2039 17899b2076c6b9fedab0c13271c68ca2 397 Gene3D G3DSA:3.40.190.10 134 371 4.7E-106 T 15-10-2018 Trad_2039 17899b2076c6b9fedab0c13271c68ca2 397 Pfam PF13416 Bacterial extracellular solute-binding protein 40 339 3.6E-37 T 15-10-2018 IPR006059 Bacterial extracellular solute-binding protein Trad_1572 f0936d7346fdd790c3db7426c144b37a 385 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Trad_1572 f0936d7346fdd790c3db7426c144b37a 385 Pfam PF00571 CBS domain 318 360 0.0022 T 15-10-2018 IPR000644 CBS domain Trad_1572 f0936d7346fdd790c3db7426c144b37a 385 Pfam PF00005 ABC transporter 22 167 1.9E-33 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Trad_1572 f0936d7346fdd790c3db7426c144b37a 385 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 14 360 5.2E-104 T 15-10-2018 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 Trad_1572 f0936d7346fdd790c3db7426c144b37a 385 Gene3D G3DSA:3.90.1280.20 300 365 2.3E-5 T 15-10-2018 Trad_1572 f0936d7346fdd790c3db7426c144b37a 385 SMART SM00382 30 217 1.4E-17 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_1572 f0936d7346fdd790c3db7426c144b37a 385 SUPERFAMILY SSF52540 5 242 5.05E-78 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_1572 f0936d7346fdd790c3db7426c144b37a 385 SUPERFAMILY SSF54631 246 361 4.77E-11 T 15-10-2018 Trad_1572 f0936d7346fdd790c3db7426c144b37a 385 Gene3D G3DSA:3.40.50.300 3 299 3.4E-79 T 15-10-2018 Trad_2393 93b99e58c36e4484704e4bb3d91ffa92 178 Pfam PF02245 Methylpurine-DNA glycosylase (MPG) 8 173 1.4E-55 T 15-10-2018 IPR003180 Methylpurine-DNA glycosylase GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 Trad_2393 93b99e58c36e4484704e4bb3d91ffa92 178 TIGRFAM TIGR00567 3mg: DNA-3-methyladenine glycosylase 4 176 5.4E-52 T 15-10-2018 IPR003180 Methylpurine-DNA glycosylase GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 Trad_2393 93b99e58c36e4484704e4bb3d91ffa92 178 SUPERFAMILY SSF50486 2 177 1.18E-58 T 15-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 Trad_2393 93b99e58c36e4484704e4bb3d91ffa92 178 Hamap MF_00527 Putative 3-methyladenine DNA glycosylase. 6 176 31.178 T 15-10-2018 IPR003180 Methylpurine-DNA glycosylase GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 Trad_2393 93b99e58c36e4484704e4bb3d91ffa92 178 Gene3D G3DSA:3.10.300.10 1 178 9.6E-59 T 15-10-2018 IPR036995 Methylpurine-DNA glycosylase superfamily GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 Trad_0026 152cb2a085cb5a4cfaada6662f4a5b9f 197 Gene3D G3DSA:1.10.3210.10 15 195 3.6E-34 T 15-10-2018 Trad_0026 152cb2a085cb5a4cfaada6662f4a5b9f 197 Pfam PF01966 HD domain 32 127 1.8E-7 T 15-10-2018 IPR006674 HD domain Trad_0026 152cb2a085cb5a4cfaada6662f4a5b9f 197 SMART SM00471 28 154 4.7E-8 T 15-10-2018 IPR003607 HD/PDEase domain Trad_0026 152cb2a085cb5a4cfaada6662f4a5b9f 197 SUPERFAMILY SSF109604 22 192 5.56E-19 T 15-10-2018 Trad_0026 152cb2a085cb5a4cfaada6662f4a5b9f 197 TIGRFAM TIGR00488 TIGR00488: putative HD superfamily hydrolase 24 188 5.3E-27 T 15-10-2018 IPR005249 Conserved hypothetical protein CHP00488 Trad_1785 186b3869bc0762e770d32e327f51003c 166 Gene3D G3DSA:3.40.50.360 3 102 7.2E-16 T 15-10-2018 IPR029039 Flavoprotein-like superfamily Trad_1785 186b3869bc0762e770d32e327f51003c 166 Pfam PF12724 Flavodoxin domain 4 144 7.5E-29 T 15-10-2018 IPR026816 Flavodoxin domain Trad_1785 186b3869bc0762e770d32e327f51003c 166 SUPERFAMILY SSF52218 1 160 6.63E-18 T 15-10-2018 IPR029039 Flavoprotein-like superfamily Trad_0173 a086bfc4e317ac2436cb06ec631c0ad8 123 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 8 110 2.0E-11 T 15-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 Trad_0173 a086bfc4e317ac2436cb06ec631c0ad8 123 Gene3D G3DSA:3.90.470.20 1 119 3.3E-30 T 15-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 Trad_0173 a086bfc4e317ac2436cb06ec631c0ad8 123 SUPERFAMILY SSF56214 2 118 2.75E-22 T 15-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 Trad_0173 a086bfc4e317ac2436cb06ec631c0ad8 123 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 2 120 1.2E-19 T 15-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 Trad_0173 a086bfc4e317ac2436cb06ec631c0ad8 123 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 3 119 20.759 T 15-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 Trad_0173 a086bfc4e317ac2436cb06ec631c0ad8 123 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 5 113 6.1E-14 T 15-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 Trad_0173 a086bfc4e317ac2436cb06ec631c0ad8 123 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 2 119 1.0E-18 T 15-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 Trad_2392 dfe612e4ddc5b0054503392f95c5bbc4 188 Pfam PF01965 DJ-1/PfpI family 2 134 2.3E-10 T 15-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 Trad_2392 dfe612e4ddc5b0054503392f95c5bbc4 188 Gene3D G3DSA:3.40.50.880 1 188 2.5E-33 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like Trad_2392 dfe612e4ddc5b0054503392f95c5bbc4 188 SUPERFAMILY SSF52317 1 186 1.09E-24 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like Trad_1601 5368ac34f8d62eee0e714dd6706952b3 530 Pfam PF00905 Penicillin binding protein transpeptidase domain 190 491 1.1E-57 T 15-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 Trad_1601 5368ac34f8d62eee0e714dd6706952b3 530 Gene3D G3DSA:3.40.710.10 165 472 1.8E-93 T 15-10-2018 Trad_1601 5368ac34f8d62eee0e714dd6706952b3 530 SUPERFAMILY SSF56601 165 500 4.4E-74 T 15-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Trad_1601 5368ac34f8d62eee0e714dd6706952b3 530 SUPERFAMILY SSF56519 117 166 6.28E-6 T 15-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 Trad_1601 5368ac34f8d62eee0e714dd6706952b3 530 Gene3D G3DSA:3.90.1310.10 105 394 1.8E-93 T 15-10-2018 Trad_2095 5c697711e8b5da71cd905d1e0493413b 378 SUPERFAMILY SSF51735 8 177 1.6E-35 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_2095 5c697711e8b5da71cd905d1e0493413b 378 Gene3D G3DSA:3.40.50.720 2 130 1.1E-27 T 15-10-2018 Trad_2095 5c697711e8b5da71cd905d1e0493413b 378 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 10 124 2.4E-16 T 15-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 Trad_2095 5c697711e8b5da71cd905d1e0493413b 378 SUPERFAMILY SSF55347 136 297 6.38E-31 T 15-10-2018 Trad_2095 5c697711e8b5da71cd905d1e0493413b 378 Gene3D G3DSA:3.30.360.10 134 351 7.0E-35 T 15-10-2018 Trad_0491 70fa13da2598ae853b3bf0859bd49858 55 Pfam PF00471 Ribosomal protein L33 8 54 3.9E-18 T 15-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_0491 70fa13da2598ae853b3bf0859bd49858 55 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 6 54 14.288 T 15-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_0491 70fa13da2598ae853b3bf0859bd49858 55 ProSitePatterns PS00582 Ribosomal protein L33 signature. 22 41 - T 15-10-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Trad_0491 70fa13da2598ae853b3bf0859bd49858 55 Gene3D G3DSA:2.20.28.120 1 55 2.5E-26 T 15-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_0491 70fa13da2598ae853b3bf0859bd49858 55 SUPERFAMILY SSF57829 4 54 7.94E-18 T 15-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 Trad_0491 70fa13da2598ae853b3bf0859bd49858 55 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 54 3.2E-23 T 15-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_0379 1fafa496da87173665a27c52b383ed65 315 Hamap MF_00024 Cobalamin biosynthesis protein CbiB [cbiB]. 1 315 76.67 T 15-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 Trad_0379 1fafa496da87173665a27c52b383ed65 315 Pfam PF03186 CobD/Cbib protein 12 293 2.3E-72 T 15-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 Trad_0379 1fafa496da87173665a27c52b383ed65 315 TIGRFAM TIGR00380 cobD: cobalamin biosynthesis protein CobD 12 278 8.3E-66 T 15-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 Trad_1119 4ab0875caab6981c2cc3be1b2b6928f4 285 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 277 36.597 T 15-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Trad_1119 4ab0875caab6981c2cc3be1b2b6928f4 285 SUPERFAMILY SSF51735 119 275 7.68E-46 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_1119 4ab0875caab6981c2cc3be1b2b6928f4 285 Gene3D G3DSA:3.40.50.10860 8 270 1.2E-103 T 15-10-2018 Trad_1119 4ab0875caab6981c2cc3be1b2b6928f4 285 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 6 117 1.8E-30 T 15-10-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Trad_1119 4ab0875caab6981c2cc3be1b2b6928f4 285 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 254 262 - T 15-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Trad_1119 4ab0875caab6981c2cc3be1b2b6928f4 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 71 98 9.9E-70 T 15-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Trad_1119 4ab0875caab6981c2cc3be1b2b6928f4 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 106 127 9.9E-70 T 15-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Trad_1119 4ab0875caab6981c2cc3be1b2b6928f4 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 30 52 9.9E-70 T 15-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Trad_1119 4ab0875caab6981c2cc3be1b2b6928f4 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 250 268 9.9E-70 T 15-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Trad_1119 4ab0875caab6981c2cc3be1b2b6928f4 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 200 229 9.9E-70 T 15-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Trad_1119 4ab0875caab6981c2cc3be1b2b6928f4 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 151 171 9.9E-70 T 15-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Trad_1119 4ab0875caab6981c2cc3be1b2b6928f4 285 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 120 275 7.6E-65 T 15-10-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Trad_1119 4ab0875caab6981c2cc3be1b2b6928f4 285 Gene3D G3DSA:3.40.50.720 6 253 1.2E-103 T 15-10-2018 Trad_1119 4ab0875caab6981c2cc3be1b2b6928f4 285 SUPERFAMILY SSF53223 2 118 3.55E-31 T 15-10-2018 Trad_0246 6ee06542399995c1a5081564ae6a7bdd 619 Pfam PF00571 CBS domain 154 206 6.0E-10 T 15-10-2018 IPR000644 CBS domain Trad_0246 6ee06542399995c1a5081564ae6a7bdd 619 Pfam PF00571 CBS domain 218 270 4.1E-9 T 15-10-2018 IPR000644 CBS domain Trad_0246 6ee06542399995c1a5081564ae6a7bdd 619 Gene3D G3DSA:3.10.580.10 150 275 2.6E-35 T 15-10-2018 Trad_0246 6ee06542399995c1a5081564ae6a7bdd 619 Gene3D G3DSA:2.60.120.10 6 145 3.0E-22 T 15-10-2018 IPR014710 RmlC-like jelly roll fold Trad_0246 6ee06542399995c1a5081564ae6a7bdd 619 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 470 613 6.7E-53 T 15-10-2018 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding Trad_0246 6ee06542399995c1a5081564ae6a7bdd 619 Pfam PF03445 Putative nucleotidyltransferase DUF294 297 433 2.5E-48 T 15-10-2018 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 Trad_0246 6ee06542399995c1a5081564ae6a7bdd 619 SUPERFAMILY SSF54631 152 270 2.78E-33 T 15-10-2018 Trad_0246 6ee06542399995c1a5081564ae6a7bdd 619 SMART SM00100 17 134 1.4E-11 T 15-10-2018 IPR000595 Cyclic nucleotide-binding domain Trad_0246 6ee06542399995c1a5081564ae6a7bdd 619 Pfam PF00027 Cyclic nucleotide-binding domain 36 118 3.3E-15 T 15-10-2018 IPR000595 Cyclic nucleotide-binding domain Trad_0246 6ee06542399995c1a5081564ae6a7bdd 619 SMART SM00116 161 208 7.0E-10 T 15-10-2018 IPR000644 CBS domain Trad_0246 6ee06542399995c1a5081564ae6a7bdd 619 SMART SM00116 225 272 0.0015 T 15-10-2018 IPR000644 CBS domain Trad_0246 6ee06542399995c1a5081564ae6a7bdd 619 SUPERFAMILY SSF51206 10 139 1.96E-25 T 15-10-2018 IPR018490 Cyclic nucleotide-binding-like Trad_0783 cd34780c2d2a1dd1b6afe316f5e95120 428 ProSitePatterns PS00885 EPSP synthase signature 2. 338 356 - T 15-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 Trad_0783 cd34780c2d2a1dd1b6afe316f5e95120 428 PIRSF PIRSF000505 5 428 3.9E-145 T 15-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 Trad_0783 cd34780c2d2a1dd1b6afe316f5e95120 428 Gene3D G3DSA:3.65.10.10 25 243 1.0E-139 T 15-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 Trad_0783 cd34780c2d2a1dd1b6afe316f5e95120 428 Gene3D G3DSA:3.65.10.10 17 418 1.0E-139 T 15-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 Trad_0783 cd34780c2d2a1dd1b6afe316f5e95120 428 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 13 428 32.218 T 15-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 Trad_0783 cd34780c2d2a1dd1b6afe316f5e95120 428 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 18 425 4.1E-131 T 15-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 Trad_0783 cd34780c2d2a1dd1b6afe316f5e95120 428 ProSitePatterns PS00104 EPSP synthase signature 1. 90 104 - T 15-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 Trad_0783 cd34780c2d2a1dd1b6afe316f5e95120 428 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 11 422 1.1E-117 T 15-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 Trad_0783 cd34780c2d2a1dd1b6afe316f5e95120 428 SUPERFAMILY SSF55205 7 425 1.57E-119 T 15-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 Trad_2113 1160398b47a3d5edd061388e6407249e 526 Pfam PF00270 DEAD/DEAH box helicase 24 189 1.3E-42 T 15-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Trad_2113 1160398b47a3d5edd061388e6407249e 526 Gene3D G3DSA:3.40.50.300 207 364 2.7E-45 T 15-10-2018 Trad_2113 1160398b47a3d5edd061388e6407249e 526 SMART SM00490 251 332 2.3E-33 T 15-10-2018 IPR001650 Helicase, C-terminal Trad_2113 1160398b47a3d5edd061388e6407249e 526 Gene3D G3DSA:3.30.70.1800 366 495 3.5E-26 T 15-10-2018 Trad_2113 1160398b47a3d5edd061388e6407249e 526 SMART SM00487 19 218 1.5E-54 T 15-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Trad_2113 1160398b47a3d5edd061388e6407249e 526 Gene3D G3DSA:3.40.50.300 1 206 1.5E-74 T 15-10-2018 Trad_2113 1160398b47a3d5edd061388e6407249e 526 SUPERFAMILY SSF52540 72 353 3.79E-69 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_2113 1160398b47a3d5edd061388e6407249e 526 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 148 156 - T 15-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site Trad_2113 1160398b47a3d5edd061388e6407249e 526 Pfam PF00271 Helicase conserved C-terminal domain 230 332 1.7E-27 T 15-10-2018 IPR001650 Helicase, C-terminal Trad_2061 fa704fe278f846f629126863ed84337b 162 Gene3D G3DSA:1.10.10.10 20 158 9.9E-25 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Trad_2061 fa704fe278f846f629126863ed84337b 162 PRINTS PR00598 Bacterial regulatory protein MarR family signature 103 119 3.5E-9 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Trad_2061 fa704fe278f846f629126863ed84337b 162 PRINTS PR00598 Bacterial regulatory protein MarR family signature 67 83 3.5E-9 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Trad_2061 fa704fe278f846f629126863ed84337b 162 PRINTS PR00598 Bacterial regulatory protein MarR family signature 133 153 3.5E-9 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Trad_2061 fa704fe278f846f629126863ed84337b 162 PRINTS PR00598 Bacterial regulatory protein MarR family signature 84 99 3.5E-9 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Trad_2061 fa704fe278f846f629126863ed84337b 162 SMART SM00347 44 143 1.4E-11 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Trad_2061 fa704fe278f846f629126863ed84337b 162 Pfam PF12802 MarR family 53 107 4.4E-10 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Trad_2061 fa704fe278f846f629126863ed84337b 162 SUPERFAMILY SSF46785 25 156 5.97E-25 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Trad_2061 fa704fe278f846f629126863ed84337b 162 ProSitePatterns PS01117 MarR-type HTH domain signature. 82 116 - T 15-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site Trad_0840 d4477cb5bc9599305d8aebfa4116f612 812 Pfam PF00171 Aldehyde dehydrogenase family 559 777 2.0E-37 T 15-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Trad_0840 d4477cb5bc9599305d8aebfa4116f612 812 Pfam PF00171 Aldehyde dehydrogenase family 47 489 1.3E-161 T 15-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Trad_0840 d4477cb5bc9599305d8aebfa4116f612 812 PIRSF PIRSF036490 6 812 0.0 T 15-10-2018 IPR011408 Aldehyde dehydrogenase Trad_0840 d4477cb5bc9599305d8aebfa4116f612 812 SUPERFAMILY SSF53720 531 777 1.96E-46 T 15-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Trad_0840 d4477cb5bc9599305d8aebfa4116f612 812 Gene3D G3DSA:3.40.605.10 534 810 1.1E-50 T 15-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Trad_0840 d4477cb5bc9599305d8aebfa4116f612 812 Gene3D G3DSA:3.40.309.10 275 464 8.2E-170 T 15-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Trad_0840 d4477cb5bc9599305d8aebfa4116f612 812 SUPERFAMILY SSF53720 32 491 3.01E-160 T 15-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Trad_0840 d4477cb5bc9599305d8aebfa4116f612 812 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 270 277 - T 15-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 Trad_0840 d4477cb5bc9599305d8aebfa4116f612 812 Gene3D G3DSA:3.40.605.10 42 489 8.2E-170 T 15-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Trad_1878 e48c85ea0399367ff1a8161c4ff393b9 243 Gene3D G3DSA:3.40.50.150 36 241 1.1E-35 T 15-10-2018 Trad_1878 e48c85ea0399367ff1a8161c4ff393b9 243 SUPERFAMILY SSF53335 39 231 5.58E-35 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Trad_1878 e48c85ea0399367ff1a8161c4ff393b9 243 Pfam PF08241 Methyltransferase domain 87 183 2.6E-17 T 15-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 Trad_0235 3b01193b6733c045c71e83558ac44e73 186 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 8 179 2.6E-28 T 15-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase Trad_0235 3b01193b6733c045c71e83558ac44e73 186 PIRSF PIRSF006806 3 182 3.6E-33 T 15-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase Trad_0235 3b01193b6733c045c71e83558ac44e73 186 Gene3D G3DSA:3.40.50.10420 6 185 2.6E-47 T 15-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily Trad_0235 3b01193b6733c045c71e83558ac44e73 186 SUPERFAMILY SSF100950 7 182 5.44E-37 T 15-10-2018 IPR037171 NagB/RpiA transferase-like Trad_0235 3b01193b6733c045c71e83558ac44e73 186 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 9 179 1.1E-32 T 15-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase Trad_0239 4b40749ca828528514eb4c9acd0336b2 141 Hamap MF_00549 Methylglyoxal synthase [mgsA]. 2 121 30.864 T 15-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 Trad_0239 4b40749ca828528514eb4c9acd0336b2 141 Gene3D G3DSA:3.40.50.1380 1 132 2.7E-50 T 15-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily Trad_0239 4b40749ca828528514eb4c9acd0336b2 141 SMART SM00851 15 108 2.4E-19 T 15-10-2018 IPR011607 Methylglyoxal synthase-like domain Trad_0239 4b40749ca828528514eb4c9acd0336b2 141 SUPERFAMILY SSF52335 2 122 6.78E-43 T 15-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily Trad_0239 4b40749ca828528514eb4c9acd0336b2 141 TIGRFAM TIGR00160 MGSA: methylglyoxal synthase 2 121 6.2E-50 T 15-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 Trad_0239 4b40749ca828528514eb4c9acd0336b2 141 Pfam PF02142 MGS-like domain 17 108 4.2E-15 T 15-10-2018 IPR011607 Methylglyoxal synthase-like domain Trad_0239 4b40749ca828528514eb4c9acd0336b2 141 PIRSF PIRSF006614 1 141 1.5E-49 T 15-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 Trad_2183 c03d59e355b32fadcfd50fc3fc23000a 290 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 86 287 1.3E-20 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Trad_2183 c03d59e355b32fadcfd50fc3fc23000a 290 SUPERFAMILY SSF161098 54 280 1.57E-64 T 15-10-2018 IPR035906 MetI-like superfamily Trad_2183 c03d59e355b32fadcfd50fc3fc23000a 290 Gene3D G3DSA:1.10.3720.10 50 290 1.5E-75 T 15-10-2018 IPR035906 MetI-like superfamily Trad_0992 001d24094467bba1e43c0ba5ca119a18 310 Gene3D G3DSA:3.40.50.2300 30 289 3.3E-97 T 15-10-2018 Trad_0992 001d24094467bba1e43c0ba5ca119a18 310 SUPERFAMILY SSF53822 9 304 8.08E-79 T 15-10-2018 IPR028082 Periplasmic binding protein-like I Trad_0992 001d24094467bba1e43c0ba5ca119a18 310 Pfam PF13407 Periplasmic binding protein domain 26 282 6.9E-53 T 15-10-2018 IPR025997 Periplasmic binding protein Trad_0992 001d24094467bba1e43c0ba5ca119a18 310 Gene3D G3DSA:3.40.50.2300 126 300 3.3E-97 T 15-10-2018 Trad_1764 611de74f1fb81f5b705a0ed2be7b3d4c 262 SUPERFAMILY SSF51735 2 152 7.66E-27 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_1764 611de74f1fb81f5b705a0ed2be7b3d4c 262 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 154 256 8.5E-31 T 15-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 Trad_1764 611de74f1fb81f5b705a0ed2be7b3d4c 262 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 2 92 8.1E-13 T 15-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal Trad_1764 611de74f1fb81f5b705a0ed2be7b3d4c 262 Gene3D G3DSA:3.40.50.720 1 156 9.0E-37 T 15-10-2018 Trad_1764 611de74f1fb81f5b705a0ed2be7b3d4c 262 Gene3D G3DSA:1.10.3730.10 157 256 7.3E-29 T 15-10-2018 Trad_1764 611de74f1fb81f5b705a0ed2be7b3d4c 262 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 1 256 23.724 T 15-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 Trad_1764 611de74f1fb81f5b705a0ed2be7b3d4c 262 PIRSF PIRSF000193 1 259 1.5E-60 T 15-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 Trad_1764 611de74f1fb81f5b705a0ed2be7b3d4c 262 SUPERFAMILY SSF48179 153 258 1.36E-25 T 15-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Trad_1764 611de74f1fb81f5b705a0ed2be7b3d4c 262 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 3 256 7.9E-70 T 15-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 Trad_0746 94faf592dfa803e8db2bd7434dba0a78 369 Pfam PF00676 Dehydrogenase E1 component 47 337 1.7E-81 T 15-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 Trad_0746 94faf592dfa803e8db2bd7434dba0a78 369 SUPERFAMILY SSF52518 28 364 4.18E-106 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold Trad_0746 94faf592dfa803e8db2bd7434dba0a78 369 Gene3D G3DSA:3.40.50.970 1 366 5.0E-125 T 15-10-2018 Trad_1037 5b851c848f815270e0c8595c1002006c 106 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 26.374 T 15-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Trad_1037 5b851c848f815270e0c8595c1002006c 106 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 15-10-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Trad_1037 5b851c848f815270e0c8595c1002006c 106 Gene3D G3DSA:3.30.70.600 1 102 4.6E-38 T 15-10-2018 IPR036838 Ribosomal protein S10 domain superfamily Trad_1037 5b851c848f815270e0c8595c1002006c 106 SMART SM01403 7 101 1.7E-55 T 15-10-2018 IPR027486 Ribosomal protein S10 domain Trad_1037 5b851c848f815270e0c8595c1002006c 106 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 3.2E-19 T 15-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Trad_1037 5b851c848f815270e0c8595c1002006c 106 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 3.2E-19 T 15-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Trad_1037 5b851c848f815270e0c8595c1002006c 106 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 3.2E-19 T 15-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Trad_1037 5b851c848f815270e0c8595c1002006c 106 Pfam PF00338 Ribosomal protein S10p/S20e 7 101 1.1E-36 T 15-10-2018 IPR027486 Ribosomal protein S10 domain Trad_1037 5b851c848f815270e0c8595c1002006c 106 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 5 101 4.1E-45 T 15-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Trad_1037 5b851c848f815270e0c8595c1002006c 106 SUPERFAMILY SSF54999 5 101 7.19E-38 T 15-10-2018 IPR036838 Ribosomal protein S10 domain superfamily Trad_2596 31808f7ac06c4db6d14d075d2e4005d3 220 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 60 113 2.0E-17 T 15-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 Trad_2596 31808f7ac06c4db6d14d075d2e4005d3 220 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 126 208 3.0E-24 T 15-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 Trad_2596 31808f7ac06c4db6d14d075d2e4005d3 220 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 127 211 9.2E-11 T 15-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 Trad_2596 31808f7ac06c4db6d14d075d2e4005d3 220 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 37 110 8.8E-36 T 15-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 Trad_2596 31808f7ac06c4db6d14d075d2e4005d3 220 Gene3D G3DSA:3.10.20.400 10 101 1.0E-40 T 15-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 Trad_2596 31808f7ac06c4db6d14d075d2e4005d3 220 SUPERFAMILY SSF101386 125 212 2.62E-20 T 15-10-2018 Trad_2596 31808f7ac06c4db6d14d075d2e4005d3 220 Gene3D G3DSA:1.10.287.1080 122 214 4.4E-23 T 15-10-2018 Trad_2596 31808f7ac06c4db6d14d075d2e4005d3 220 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 122 208 16.677 T 15-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 Trad_2596 31808f7ac06c4db6d14d075d2e4005d3 220 SUPERFAMILY SSF141734 13 115 4.71E-47 T 15-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 Trad_2596 31808f7ac06c4db6d14d075d2e4005d3 220 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 13 213 34.99 T 15-10-2018 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19 Trad_2596 31808f7ac06c4db6d14d075d2e4005d3 220 Hamap MF_01021 Phosphoribosyl-AMP cyclohydrolase [hisI]. 11 114 32.098 T 15-10-2018 IPR026660 Phosphoribosyl-AMP cyclohydrolase GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 Trad_2915 5eac6dad26750e27de97765c6e7e8dac 436 Pfam PF10011 Predicted membrane protein (DUF2254) 14 379 6.4E-110 T 15-10-2018 IPR018723 Protein of unknown function DUF2254, membrane Trad_0022 6d841e1acca97d4c835211c39d089e28 101 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 99 1.1E-34 T 15-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_0022 6d841e1acca97d4c835211c39d089e28 101 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 101 25.164 T 15-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_0022 6d841e1acca97d4c835211c39d089e28 101 Pfam PF00829 Ribosomal prokaryotic L21 protein 2 99 1.5E-37 T 15-10-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_0022 6d841e1acca97d4c835211c39d089e28 101 SUPERFAMILY SSF141091 2 99 3.27E-35 T 15-10-2018 IPR036164 L21-like superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_1821 b64a81d3a385ff4c6d7351554fa26fc9 386 Pfam PF00294 pfkB family carbohydrate kinase 14 341 7.0E-30 T 15-10-2018 IPR011611 Carbohydrate kinase PfkB Trad_1821 b64a81d3a385ff4c6d7351554fa26fc9 386 SUPERFAMILY SSF53613 13 348 1.87E-52 T 15-10-2018 IPR029056 Ribokinase-like Trad_1821 b64a81d3a385ff4c6d7351554fa26fc9 386 Gene3D G3DSA:3.40.1190.20 12 355 6.7E-65 T 15-10-2018 IPR029056 Ribokinase-like Trad_2293 a3fe00cc24231534d52129bafa3a34ab 223 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 1 218 4.7E-31 T 15-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 Trad_2293 a3fe00cc24231534d52129bafa3a34ab 223 SUPERFAMILY SSF51569 1 219 2.2E-45 T 15-10-2018 Trad_2293 a3fe00cc24231534d52129bafa3a34ab 223 Gene3D G3DSA:3.20.20.70 1 222 1.2E-54 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Trad_2293 a3fe00cc24231534d52129bafa3a34ab 223 ProSitePatterns PS01054 Transaldolase signature 1. 22 30 - T 15-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 Trad_0974 f0ca5204da7840084ae50f3d488d1a6b 290 Pfam PF00005 ABC transporter 20 183 3.9E-29 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Trad_0974 f0ca5204da7840084ae50f3d488d1a6b 290 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 232 254 3.5E-11 T 15-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal Trad_0974 f0ca5204da7840084ae50f3d488d1a6b 290 Gene3D G3DSA:3.40.50.300 1 256 1.1E-58 T 15-10-2018 Trad_0974 f0ca5204da7840084ae50f3d488d1a6b 290 SMART SM00382 28 232 2.0E-6 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_0974 f0ca5204da7840084ae50f3d488d1a6b 290 SUPERFAMILY SSF52540 3 255 8.8E-62 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_2244 80a3c3b0eae15a9c02a7dc7cf681d101 512 SUPERFAMILY SSF51905 3 386 1.3E-43 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Trad_2244 80a3c3b0eae15a9c02a7dc7cf681d101 512 Pfam PF01593 Flavin containing amine oxidoreductase 16 280 2.6E-12 T 15-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 Trad_2244 80a3c3b0eae15a9c02a7dc7cf681d101 512 Gene3D G3DSA:3.50.50.60 183 308 9.3E-17 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Trad_2244 80a3c3b0eae15a9c02a7dc7cf681d101 512 Gene3D G3DSA:3.50.50.60 4 73 1.1E-11 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Trad_1970 89738f34df9b0f93fdb12904c1d4f7ba 485 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 193 480 1.3E-109 T 15-10-2018 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Trad_1970 89738f34df9b0f93fdb12904c1d4f7ba 485 Gene3D G3DSA:3.30.360.10 179 481 3.1E-119 T 15-10-2018 Trad_1970 89738f34df9b0f93fdb12904c1d4f7ba 485 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 240 256 1.7E-47 T 15-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Trad_1970 89738f34df9b0f93fdb12904c1d4f7ba 485 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 170 198 1.7E-47 T 15-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Trad_1970 89738f34df9b0f93fdb12904c1d4f7ba 485 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 146 159 1.7E-47 T 15-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Trad_1970 89738f34df9b0f93fdb12904c1d4f7ba 485 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 222 239 1.7E-47 T 15-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Trad_1970 89738f34df9b0f93fdb12904c1d4f7ba 485 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 323 349 1.7E-47 T 15-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Trad_1970 89738f34df9b0f93fdb12904c1d4f7ba 485 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 10 481 81.566 T 15-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Trad_1970 89738f34df9b0f93fdb12904c1d4f7ba 485 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 14 190 2.3E-61 T 15-10-2018 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Trad_1970 89738f34df9b0f93fdb12904c1d4f7ba 485 SUPERFAMILY SSF51735 9 193 1.01E-60 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_1970 89738f34df9b0f93fdb12904c1d4f7ba 485 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 10 481 8.8E-182 T 15-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Trad_1970 89738f34df9b0f93fdb12904c1d4f7ba 485 SUPERFAMILY SSF55347 180 480 7.19E-108 T 15-10-2018 Trad_1970 89738f34df9b0f93fdb12904c1d4f7ba 485 Gene3D G3DSA:3.40.50.720 7 178 4.2E-56 T 15-10-2018 Trad_1970 89738f34df9b0f93fdb12904c1d4f7ba 485 PIRSF PIRSF000110 1 483 3.0E-173 T 15-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Trad_1337 545ff643b3f97fd2f316064fc512f7ea 439 Gene3D G3DSA:3.40.50.300 159 439 7.6E-109 T 15-10-2018 Trad_1337 545ff643b3f97fd2f316064fc512f7ea 439 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 1 436 8.0E-173 T 15-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 Trad_1337 545ff643b3f97fd2f316064fc512f7ea 439 Pfam PF00772 DnaB-like helicase N terminal domain 2 103 5.0E-34 T 15-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 Trad_1337 545ff643b3f97fd2f316064fc512f7ea 439 SUPERFAMILY SSF52540 175 427 1.09E-51 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_1337 545ff643b3f97fd2f316064fc512f7ea 439 Pfam PF03796 DnaB-like helicase C terminal domain 177 434 2.2E-112 T 15-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 Trad_1337 545ff643b3f97fd2f316064fc512f7ea 439 Gene3D G3DSA:1.10.860.10 1 158 4.6E-56 T 15-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal Trad_1337 545ff643b3f97fd2f316064fc512f7ea 439 SUPERFAMILY SSF48024 2 111 2.62E-34 T 15-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 Trad_1120 5dfceccbb852d4a62e460de7b86c0270 366 SUPERFAMILY SSF53383 22 360 1.63E-103 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Trad_1120 5dfceccbb852d4a62e460de7b86c0270 366 Gene3D G3DSA:3.90.1150.10 240 363 1.4E-33 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Trad_1120 5dfceccbb852d4a62e460de7b86c0270 366 Gene3D G3DSA:3.40.640.10 11 239 3.1E-88 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Trad_1120 5dfceccbb852d4a62e460de7b86c0270 366 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 19 357 1.2E-116 T 15-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase Trad_1120 5dfceccbb852d4a62e460de7b86c0270 366 PIRSF PIRSF000390 5 363 3.6E-102 T 15-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase Trad_1813 1d3feeed04d687fc08fc88930b172062 848 PIRSF PIRSF000460 1 791 1.1E-260 T 15-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 Trad_1813 1d3feeed04d687fc08fc88930b172062 848 Pfam PF11897 Protein of unknown function (DUF3417) 13 121 7.9E-35 T 15-10-2018 IPR024517 Glycogen phosphorylase, domain of unknown function DUF3417 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238 Trad_1813 1d3feeed04d687fc08fc88930b172062 848 TIGRFAM TIGR02094 more_P_ylases: alpha-glucan phosphorylases 110 709 7.6E-248 T 15-10-2018 IPR011834 Alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238 Trad_1813 1d3feeed04d687fc08fc88930b172062 848 Gene3D G3DSA:3.40.50.2000 116 214 4.4E-7 T 15-10-2018 Trad_1813 1d3feeed04d687fc08fc88930b172062 848 Gene3D G3DSA:3.40.50.2000 419 670 8.6E-39 T 15-10-2018 Trad_1813 1d3feeed04d687fc08fc88930b172062 848 Pfam PF00343 Carbohydrate phosphorylase 362 620 3.0E-13 T 15-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 Trad_1813 1d3feeed04d687fc08fc88930b172062 848 SUPERFAMILY SSF53756 7 742 4.93E-205 T 15-10-2018 Trad_1813 1d3feeed04d687fc08fc88930b172062 848 Gene3D G3DSA:3.40.50.2000 269 418 1.1E-9 T 15-10-2018 Trad_2488 ddd04302fcfbda28eaf5c3cc2fff543b 479 Gene3D G3DSA:3.30.565.10 317 455 1.2E-36 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Trad_2488 ddd04302fcfbda28eaf5c3cc2fff543b 479 SUPERFAMILY SSF47384 234 310 2.35E-13 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Trad_2488 ddd04302fcfbda28eaf5c3cc2fff543b 479 Gene3D G3DSA:1.20.1480.50 157 254 1.5E-8 T 15-10-2018 Trad_2488 ddd04302fcfbda28eaf5c3cc2fff543b 479 SMART SM00387 351 457 2.9E-35 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Trad_2488 ddd04302fcfbda28eaf5c3cc2fff543b 479 SUPERFAMILY SSF55874 320 455 3.54E-37 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Trad_2488 ddd04302fcfbda28eaf5c3cc2fff543b 479 Gene3D G3DSA:1.10.287.130 256 313 4.3E-10 T 15-10-2018 Trad_2488 ddd04302fcfbda28eaf5c3cc2fff543b 479 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 351 455 1.3E-25 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Trad_2488 ddd04302fcfbda28eaf5c3cc2fff543b 479 Pfam PF00512 His Kinase A (phospho-acceptor) domain 251 311 1.1E-12 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Trad_2488 ddd04302fcfbda28eaf5c3cc2fff543b 479 PRINTS PR00344 Bacterial sensor protein C-terminal signature 417 435 9.5E-19 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Trad_2488 ddd04302fcfbda28eaf5c3cc2fff543b 479 PRINTS PR00344 Bacterial sensor protein C-terminal signature 388 402 9.5E-19 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Trad_2488 ddd04302fcfbda28eaf5c3cc2fff543b 479 PRINTS PR00344 Bacterial sensor protein C-terminal signature 406 416 9.5E-19 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Trad_2488 ddd04302fcfbda28eaf5c3cc2fff543b 479 PRINTS PR00344 Bacterial sensor protein C-terminal signature 441 454 9.5E-19 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Trad_2488 ddd04302fcfbda28eaf5c3cc2fff543b 479 SMART SM00388 250 314 8.6E-12 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Trad_0581 79f17a65d90a9cb30c920cacd83cb064 184 SUPERFAMILY SSF53448 5 183 3.58E-30 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Trad_0581 79f17a65d90a9cb30c920cacd83cb064 184 Gene3D G3DSA:3.90.550.10 7 184 2.0E-44 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Trad_0581 79f17a65d90a9cb30c920cacd83cb064 184 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 2 184 20.06 T 15-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 Trad_0581 79f17a65d90a9cb30c920cacd83cb064 184 Pfam PF12804 MobA-like NTP transferase domain 6 152 2.0E-31 T 15-10-2018 IPR025877 MobA-like NTP transferase Trad_0445 1c90f00c65d40782e226ddf9fed76b2f 296 SUPERFAMILY SSF52540 90 251 4.02E-40 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_0445 1c90f00c65d40782e226ddf9fed76b2f 296 Pfam PF02562 PhoH-like protein 91 293 1.3E-96 T 15-10-2018 IPR003714 PhoH-like protein GO:0005524 Trad_0445 1c90f00c65d40782e226ddf9fed76b2f 296 Gene3D G3DSA:3.40.50.300 88 293 5.0E-76 T 15-10-2018 Trad_1582 5d1dbd5b8d5e360d96897319ddae4fb5 661 ProSitePatterns PS01229 Hypothetical cof family signature 2. 547 569 - T 15-10-2018 Trad_1582 5d1dbd5b8d5e360d96897319ddae4fb5 661 Gene3D G3DSA:3.40.50.1000 334 598 4.0E-76 T 15-10-2018 IPR023214 HAD superfamily Trad_1582 5d1dbd5b8d5e360d96897319ddae4fb5 661 Pfam PF00122 E1-E2 ATPase 153 333 1.7E-46 T 15-10-2018 Trad_1582 5d1dbd5b8d5e360d96897319ddae4fb5 661 Gene3D G3DSA:3.40.1110.10 364 483 4.0E-76 T 15-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 Trad_1582 5d1dbd5b8d5e360d96897319ddae4fb5 661 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 102 649 5.8E-166 T 15-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 Trad_1582 5d1dbd5b8d5e360d96897319ddae4fb5 661 Gene3D G3DSA:2.70.150.20 145 257 4.1E-32 T 15-10-2018 Trad_1582 5d1dbd5b8d5e360d96897319ddae4fb5 661 SUPERFAMILY SSF56784 351 647 1.21E-44 T 15-10-2018 IPR036412 HAD-like superfamily Trad_1582 5d1dbd5b8d5e360d96897319ddae4fb5 661 Pfam PF00702 haloacid dehalogenase-like hydrolase 349 561 8.5E-37 T 15-10-2018 Trad_1582 5d1dbd5b8d5e360d96897319ddae4fb5 661 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 498 508 1.9E-29 T 15-10-2018 Trad_1582 5d1dbd5b8d5e360d96897319ddae4fb5 661 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 202 216 1.9E-29 T 15-10-2018 Trad_1582 5d1dbd5b8d5e360d96897319ddae4fb5 661 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 547 566 1.9E-29 T 15-10-2018 Trad_1582 5d1dbd5b8d5e360d96897319ddae4fb5 661 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 476 487 1.9E-29 T 15-10-2018 Trad_1582 5d1dbd5b8d5e360d96897319ddae4fb5 661 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 570 582 1.9E-29 T 15-10-2018 Trad_1582 5d1dbd5b8d5e360d96897319ddae4fb5 661 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 353 367 1.9E-29 T 15-10-2018 Trad_1582 5d1dbd5b8d5e360d96897319ddae4fb5 661 SUPERFAMILY SSF81653 155 252 5.89E-25 T 15-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 Trad_1582 5d1dbd5b8d5e360d96897319ddae4fb5 661 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 126 625 3.7E-70 T 15-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Trad_1582 5d1dbd5b8d5e360d96897319ddae4fb5 661 SUPERFAMILY SSF81665 107 641 3.01E-10 T 15-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 Trad_0475 23824e7149e55476e9f0c9316e2d6658 147 Pfam PF06305 Lipopolysaccharide assembly protein A domain 26 80 3.0E-10 T 15-10-2018 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 Trad_1588 8504ac672f0278f95bf14f6c1d47ca14 351 SUPERFAMILY SSF55326 19 182 2.44E-37 T 15-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Trad_1588 8504ac672f0278f95bf14f6c1d47ca14 351 Pfam PF02769 AIR synthase related protein, C-terminal domain 189 345 1.1E-23 T 15-10-2018 IPR010918 PurM-like, C-terminal domain Trad_1588 8504ac672f0278f95bf14f6c1d47ca14 351 SUPERFAMILY SSF56042 184 344 4.78E-45 T 15-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Trad_1588 8504ac672f0278f95bf14f6c1d47ca14 351 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 19 338 2.5E-97 T 15-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Trad_1588 8504ac672f0278f95bf14f6c1d47ca14 351 Gene3D G3DSA:3.30.1330.10 17 183 1.7E-54 T 15-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Trad_1588 8504ac672f0278f95bf14f6c1d47ca14 351 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 18 348 38.46 T 15-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Trad_1588 8504ac672f0278f95bf14f6c1d47ca14 351 Pfam PF00586 AIR synthase related protein, N-terminal domain 73 176 8.4E-14 T 15-10-2018 IPR016188 PurM-like, N-terminal domain Trad_1588 8504ac672f0278f95bf14f6c1d47ca14 351 Gene3D G3DSA:3.90.650.10 184 350 2.4E-53 T 15-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Trad_0687 3507238cf04b7660e9c09a913b4a81ad 443 PRINTS PR00344 Bacterial sensor protein C-terminal signature 350 364 8.0E-20 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Trad_0687 3507238cf04b7660e9c09a913b4a81ad 443 PRINTS PR00344 Bacterial sensor protein C-terminal signature 404 417 8.0E-20 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Trad_0687 3507238cf04b7660e9c09a913b4a81ad 443 PRINTS PR00344 Bacterial sensor protein C-terminal signature 368 378 8.0E-20 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Trad_0687 3507238cf04b7660e9c09a913b4a81ad 443 PRINTS PR00344 Bacterial sensor protein C-terminal signature 380 398 8.0E-20 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Trad_0687 3507238cf04b7660e9c09a913b4a81ad 443 Gene3D G3DSA:3.30.565.10 280 418 5.6E-36 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Trad_0687 3507238cf04b7660e9c09a913b4a81ad 443 SMART SM00304 163 215 2.6E-4 T 15-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Trad_0687 3507238cf04b7660e9c09a913b4a81ad 443 SMART SM00388 216 278 0.0022 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Trad_0687 3507238cf04b7660e9c09a913b4a81ad 443 Gene3D G3DSA:1.10.287.130 162 274 7.4E-13 T 15-10-2018 Trad_0687 3507238cf04b7660e9c09a913b4a81ad 443 SMART SM00387 314 420 4.0E-33 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Trad_0687 3507238cf04b7660e9c09a913b4a81ad 443 SUPERFAMILY SSF47384 199 276 5.1E-8 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Trad_0687 3507238cf04b7660e9c09a913b4a81ad 443 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 315 417 1.8E-26 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Trad_0687 3507238cf04b7660e9c09a913b4a81ad 443 SUPERFAMILY SSF55874 268 418 6.16E-35 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Trad_1445 c13c986e0421d714e080731a869624de 349 SUPERFAMILY SSF161098 19 349 8.18E-69 T 15-10-2018 IPR035906 MetI-like superfamily Trad_1445 c13c986e0421d714e080731a869624de 349 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 168 341 3.9E-22 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Trad_1665 fd60b761c872d5f3e5289435324b1af1 385 Pfam PF09700 CRISPR-associated protein (Cas_Cmr3) 8 385 1.3E-82 T 15-10-2018 IPR019117 CRISPR-associated protein, Cmr3 Trad_1665 fd60b761c872d5f3e5289435324b1af1 385 Gene3D G3DSA:3.30.70.2950 298 385 2.1E-14 T 15-10-2018 Trad_2967 0bb2ae776fc2d3491a6ac2d953ed5f8f 390 TIGRFAM TIGR02635 RhaI_grampos: L-rhamnose isomerase 6 379 5.1E-168 T 15-10-2018 IPR013457 Rhamnose isomerase-related Trad_2967 0bb2ae776fc2d3491a6ac2d953ed5f8f 390 SUPERFAMILY SSF51658 25 361 1.52E-77 T 15-10-2018 IPR036237 Xylose isomerase-like superfamily Trad_2967 0bb2ae776fc2d3491a6ac2d953ed5f8f 390 Pfam PF06134 L-rhamnose isomerase (RhaA) 77 232 1.4E-5 T 15-10-2018 IPR009308 Rhamnose isomerase GO:0008740|GO:0019299|GO:0030145 KEGG: 00051+5.3.1.14 Trad_2967 0bb2ae776fc2d3491a6ac2d953ed5f8f 390 Gene3D G3DSA:3.20.20.150 2 381 4.5E-123 T 15-10-2018 Trad_2967 0bb2ae776fc2d3491a6ac2d953ed5f8f 390 ProDom PD042532 ISOMERASE L-RHAMNOSE METAL-BINDING METABOLISM RHAMNOSE MANGANESE ENZYME KINASE 3D-STRUCTURE RHAA/RHAB 31 159 0.005 T 15-10-2018 Trad_1085 2a3e61dddf0ee3a2e629a51c319c21c6 283 Pfam PF00106 short chain dehydrogenase 5 127 5.0E-22 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_1085 2a3e61dddf0ee3a2e629a51c319c21c6 283 SUPERFAMILY SSF51735 5 178 9.43E-26 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_1085 2a3e61dddf0ee3a2e629a51c319c21c6 283 Gene3D G3DSA:3.40.50.720 1 208 3.6E-26 T 15-10-2018 Trad_1891 e2955befe2eec12980342c6a6f66180a 144 Pfam PF11697 Protein of unknown function (DUF3293) 44 116 6.4E-24 T 15-10-2018 IPR021710 Protein of unknown function DUF3293 Trad_1380 d5e47cc7f4538aab6fdc1862c6efb4aa 516 Pfam PF10079 Bacillithiol biosynthesis BshC 34 503 7.1E-101 T 15-10-2018 IPR011199 Bacillithiol biosynthesis BshC Trad_1380 d5e47cc7f4538aab6fdc1862c6efb4aa 516 TIGRFAM TIGR03998 thiol_BshC: bacillithiol biosynthesis cysteine-adding enzyme BshC 15 509 1.4E-119 T 15-10-2018 IPR011199 Bacillithiol biosynthesis BshC Trad_1380 d5e47cc7f4538aab6fdc1862c6efb4aa 516 Hamap MF_01867 Putative cysteine ligase BshC [bshC]. 1 516 22.627 T 15-10-2018 IPR011199 Bacillithiol biosynthesis BshC Trad_2578 f5736ce967bdfccfcd81548fbf3f0ca5 211 SUPERFAMILY SSF52317 9 203 4.14E-58 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like Trad_2578 f5736ce967bdfccfcd81548fbf3f0ca5 211 Pfam PF01965 DJ-1/PfpI family 10 183 2.1E-27 T 15-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 Trad_2578 f5736ce967bdfccfcd81548fbf3f0ca5 211 Gene3D G3DSA:3.40.50.880 2 211 1.2E-73 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like Trad_2883 ee827008cfbc8fcafdf3d10d2ca63e12 789 Pfam PF13205 Bacterial Ig-like domain 27 132 1.2E-13 T 15-10-2018 IPR032812 SbsA, Ig-like domain Trad_2883 ee827008cfbc8fcafdf3d10d2ca63e12 789 Gene3D G3DSA:2.60.40.10 141 247 1.7E-11 T 15-10-2018 IPR013783 Immunoglobulin-like fold Trad_2883 ee827008cfbc8fcafdf3d10d2ca63e12 789 Gene3D G3DSA:2.60.40.10 503 589 2.4E-6 T 15-10-2018 IPR013783 Immunoglobulin-like fold Trad_2883 ee827008cfbc8fcafdf3d10d2ca63e12 789 Pfam PF15780 Abnormal spindle-like microcephaly-assoc'd, ASPM-SPD-2-Hydin 149 232 1.6E-7 T 15-10-2018 IPR031549 Abnormal spindle-like microcephaly-associated protein, ASH domain Trad_1469 3c47aaffabe9a70828521aac6e4ad887 142 PIRSF PIRSF016498 1 129 2.6E-18 T 15-10-2018 IPR018699 Protein of unknown function DUF2203 Trad_1469 3c47aaffabe9a70828521aac6e4ad887 142 Pfam PF09969 Uncharacterized conserved protein (DUF2203) 3 122 4.9E-32 T 15-10-2018 IPR018699 Protein of unknown function DUF2203 Trad_1236 35e8a3a75aaa2e8c86b333b78063d507 314 Gene3D G3DSA:3.40.50.2300 39 295 5.9E-74 T 15-10-2018 Trad_1236 35e8a3a75aaa2e8c86b333b78063d507 314 Gene3D G3DSA:3.40.50.2300 134 297 5.9E-74 T 15-10-2018 Trad_1236 35e8a3a75aaa2e8c86b333b78063d507 314 SUPERFAMILY SSF53822 26 305 1.27E-49 T 15-10-2018 IPR028082 Periplasmic binding protein-like I Trad_1236 35e8a3a75aaa2e8c86b333b78063d507 314 Pfam PF13407 Periplasmic binding protein domain 30 280 6.4E-43 T 15-10-2018 IPR025997 Periplasmic binding protein Trad_0982 ecda23cdd65bca4dcffad54b3b4a5bba 180 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 1 178 30.704 T 15-10-2018 IPR004507 Flavin prenyltransferase UbiX-like Trad_0982 ecda23cdd65bca4dcffad54b3b4a5bba 180 Pfam PF02441 Flavoprotein 1 157 1.3E-22 T 15-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 Trad_0982 ecda23cdd65bca4dcffad54b3b4a5bba 180 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 2 176 4.4E-54 T 15-10-2018 IPR004507 Flavin prenyltransferase UbiX-like Trad_0982 ecda23cdd65bca4dcffad54b3b4a5bba 180 SUPERFAMILY SSF52507 1 178 1.83E-54 T 15-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 Trad_0982 ecda23cdd65bca4dcffad54b3b4a5bba 180 Gene3D G3DSA:3.40.50.1950 1 180 1.8E-68 T 15-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 Trad_1280 902f98f64b3a5f0b3205a04546da064e 226 SUPERFAMILY SSF53167 4 209 7.65E-27 T 15-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 Trad_1280 902f98f64b3a5f0b3205a04546da064e 226 Hamap MF_00991 Futalosine hydrolase [mqnB]. 4 225 21.15 T 15-10-2018 IPR019963 Futalosine hydrolase GO:0009234|GO:0016799 KEGG: 00130+3.2.2.26|MetaCyc: PWY-7374 Trad_1280 902f98f64b3a5f0b3205a04546da064e 226 TIGRFAM TIGR03664 fut_nucase: futalosine hydrolase 3 223 6.6E-50 T 15-10-2018 IPR019963 Futalosine hydrolase GO:0009234|GO:0016799 KEGG: 00130+3.2.2.26|MetaCyc: PWY-7374 Trad_1280 902f98f64b3a5f0b3205a04546da064e 226 Gene3D G3DSA:3.40.50.1580 30 225 6.4E-32 T 15-10-2018 Trad_1280 902f98f64b3a5f0b3205a04546da064e 226 Pfam PF01048 Phosphorylase superfamily 40 224 1.3E-21 T 15-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 Trad_2115 2f20a469c54c9db408295e2dca07a922 268 SUPERFAMILY SSF56300 17 230 1.29E-27 T 15-10-2018 Trad_2115 2f20a469c54c9db408295e2dca07a922 268 Gene3D G3DSA:3.60.21.10 11 254 1.4E-39 T 15-10-2018 IPR029052 Metallo-dependent phosphatase-like Trad_2115 2f20a469c54c9db408295e2dca07a922 268 Pfam PF00149 Calcineurin-like phosphoesterase 19 227 1.3E-7 T 15-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 Trad_0615 194b4dc712d97ab5002aaa02b5d33faf 253 SUPERFAMILY SSF51735 2 251 7.08E-77 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_0615 194b4dc712d97ab5002aaa02b5d33faf 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 1.5E-37 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_0615 194b4dc712d97ab5002aaa02b5d33faf 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 1.5E-37 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_0615 194b4dc712d97ab5002aaa02b5d33faf 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 1.5E-37 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_0615 194b4dc712d97ab5002aaa02b5d33faf 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.5E-37 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_0615 194b4dc712d97ab5002aaa02b5d33faf 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 1.5E-37 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_0615 194b4dc712d97ab5002aaa02b5d33faf 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 1.5E-37 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_0615 194b4dc712d97ab5002aaa02b5d33faf 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 250 2.8E-63 T 15-10-2018 Trad_0615 194b4dc712d97ab5002aaa02b5d33faf 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 15-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Trad_0615 194b4dc712d97ab5002aaa02b5d33faf 253 Gene3D G3DSA:3.40.50.720 1 252 1.4E-80 T 15-10-2018 Trad_0615 194b4dc712d97ab5002aaa02b5d33faf 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 1.3E-10 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_0615 194b4dc712d97ab5002aaa02b5d33faf 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 1.3E-10 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_0615 194b4dc712d97ab5002aaa02b5d33faf 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 1.3E-10 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_1646 2dc4ce289d3511505e2849da59e90389 196 ProSitePatterns PS00910 Uncharacterized protein family UPF0029 signature. 74 103 - T 15-10-2018 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site Trad_1646 2dc4ce289d3511505e2849da59e90389 196 SUPERFAMILY SSF54980 131 195 3.02E-7 T 15-10-2018 IPR035647 EF-G domain III/V-like Trad_1646 2dc4ce289d3511505e2849da59e90389 196 SUPERFAMILY SSF54211 3 126 5.69E-39 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Trad_1646 2dc4ce289d3511505e2849da59e90389 196 Gene3D G3DSA:3.30.230.30 2 127 6.0E-44 T 15-10-2018 IPR036956 Impact, N-terminal domain superfamily Trad_1646 2dc4ce289d3511505e2849da59e90389 196 Pfam PF01205 Uncharacterized protein family UPF0029 17 119 2.4E-28 T 15-10-2018 IPR001498 Impact, N-terminal Trad_0428 8e1c9e989408110d8bdce1097a2f6d85 89 PIRSF PIRSF032582 4 84 6.1E-21 T 15-10-2018 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 Trad_0428 8e1c9e989408110d8bdce1097a2f6d85 89 Gene3D G3DSA:3.30.70.240 2 88 1.4E-30 T 15-10-2018 Trad_0428 8e1c9e989408110d8bdce1097a2f6d85 89 Hamap MF_01471 CRISPR-associated endoribonuclease Cas2 [cas2]. 3 87 16.007 T 15-10-2018 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 Trad_0428 8e1c9e989408110d8bdce1097a2f6d85 89 SUPERFAMILY SSF143430 4 71 7.98E-23 T 15-10-2018 Trad_0428 8e1c9e989408110d8bdce1097a2f6d85 89 TIGRFAM TIGR01573 cas2: CRISPR-associated endonuclease Cas2 5 70 2.7E-16 T 15-10-2018 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 Trad_0428 8e1c9e989408110d8bdce1097a2f6d85 89 Pfam PF09827 CRISPR associated protein Cas2 4 70 1.3E-20 T 15-10-2018 IPR019199 Virulence-associated protein D / CRISPR associated protein Cas2 Trad_2279 bafd7272b7005424cf3abf4e0d12c414 434 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 203 217 - T 15-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 Trad_2279 bafd7272b7005424cf3abf4e0d12c414 434 Gene3D G3DSA:3.90.1150.10 294 433 1.9E-48 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Trad_2279 bafd7272b7005424cf3abf4e0d12c414 434 Gene3D G3DSA:3.40.640.10 3 290 3.5E-95 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Trad_2279 bafd7272b7005424cf3abf4e0d12c414 434 SUPERFAMILY SSF53383 3 426 3.13E-120 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Trad_2279 bafd7272b7005424cf3abf4e0d12c414 434 PIRSF PIRSF001434 1 429 5.0E-117 T 15-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 Trad_2279 bafd7272b7005424cf3abf4e0d12c414 434 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 4 426 2.2E-187 T 15-10-2018 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 Trad_2279 bafd7272b7005424cf3abf4e0d12c414 434 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 6 425 7.1E-128 T 15-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 Trad_2333 a773b70a557f7fa7cd89da1f65c1f869 258 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 1 249 1.4E-68 T 15-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 Trad_2333 a773b70a557f7fa7cd89da1f65c1f869 258 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 185 201 - T 15-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 Trad_2333 a773b70a557f7fa7cd89da1f65c1f869 258 Pfam PF01026 TatD related DNase 2 248 1.4E-64 T 15-10-2018 IPR001130 TatD family GO:0016788 Trad_2333 a773b70a557f7fa7cd89da1f65c1f869 258 PIRSF PIRSF005902 1 252 3.1E-61 T 15-10-2018 IPR001130 TatD family GO:0016788 Trad_2333 a773b70a557f7fa7cd89da1f65c1f869 258 SUPERFAMILY SSF51556 1 250 1.09E-70 T 15-10-2018 IPR032466 Metal-dependent hydrolase Trad_2333 a773b70a557f7fa7cd89da1f65c1f869 258 Gene3D G3DSA:3.20.20.140 1 250 6.4E-74 T 15-10-2018 Trad_1597 470a3e407fdf394b8f6d899a1a2a838b 372 SUPERFAMILY SSF53822 38 228 3.65E-5 T 15-10-2018 IPR028082 Periplasmic binding protein-like I Trad_1597 470a3e407fdf394b8f6d899a1a2a838b 372 Pfam PF02608 ABC transporter substrate-binding protein PnrA-like 27 226 8.3E-40 T 15-10-2018 IPR003760 ABC transporter substrate-binding protein PnrA-like GO:0005886 Trad_0467 074cec668de3b5937992e3718336330a 291 SUPERFAMILY SSF161098 20 291 4.11E-68 T 15-10-2018 IPR035906 MetI-like superfamily Trad_0467 074cec668de3b5937992e3718336330a 291 Gene3D G3DSA:1.10.3720.10 15 279 3.5E-61 T 15-10-2018 IPR035906 MetI-like superfamily Trad_0467 074cec668de3b5937992e3718336330a 291 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 281 1.4E-16 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Trad_2702 529672e15da211edf74665cd18f63a46 133 SUPERFAMILY SSF82153 2 132 9.81E-41 T 15-10-2018 IPR036378 FAS1 domain superfamily Trad_2702 529672e15da211edf74665cd18f63a46 133 Pfam PF02469 Fasciclin domain 13 132 1.9E-38 T 15-10-2018 IPR000782 FAS1 domain Trad_2702 529672e15da211edf74665cd18f63a46 133 SMART SM00554 37 133 4.2E-35 T 15-10-2018 IPR000782 FAS1 domain Trad_2702 529672e15da211edf74665cd18f63a46 133 Gene3D G3DSA:2.30.180.10 1 133 3.8E-50 T 15-10-2018 IPR036378 FAS1 domain superfamily Trad_2385 12986cacde75ea38e0ce8d883a5481b0 258 SUPERFAMILY SSF56300 1 245 3.46E-73 T 15-10-2018 Trad_2385 12986cacde75ea38e0ce8d883a5481b0 258 Gene3D G3DSA:3.60.21.10 1 254 5.0E-96 T 15-10-2018 IPR029052 Metallo-dependent phosphatase-like Trad_2385 12986cacde75ea38e0ce8d883a5481b0 258 PIRSF PIRSF004789 1 257 2.1E-83 T 15-10-2018 IPR005235 Metallophosphoesterase, YmdB-like Trad_2385 12986cacde75ea38e0ce8d883a5481b0 258 Pfam PF13277 YmdB-like protein 4 249 2.6E-93 T 15-10-2018 IPR005235 Metallophosphoesterase, YmdB-like Trad_0061 071b3f18445aa7c1ce94ea442ab0dc71 302 SUPERFAMILY SSF51735 1 300 7.49E-72 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_0061 071b3f18445aa7c1ce94ea442ab0dc71 302 Gene3D G3DSA:3.30.1780.10 6 300 1.2E-70 T 15-10-2018 IPR023401 Ornithine cyclodeaminase, N-terminal Reactome: R-HSA-71064 Trad_0061 071b3f18445aa7c1ce94ea442ab0dc71 302 Pfam PF02423 Ornithine cyclodeaminase/mu-crystallin family 6 300 4.0E-44 T 15-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 Trad_0061 071b3f18445aa7c1ce94ea442ab0dc71 302 Gene3D G3DSA:3.40.50.720 119 287 1.2E-70 T 15-10-2018 Trad_0061 071b3f18445aa7c1ce94ea442ab0dc71 302 PIRSF PIRSF001439 1 302 6.9E-61 T 15-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 Trad_1753 132ad7c45bd7f37dea87dafa71558609 151 Pfam PF13673 Acetyltransferase (GNAT) domain 37 134 9.1E-10 T 15-10-2018 IPR000182 GNAT domain Trad_1753 132ad7c45bd7f37dea87dafa71558609 151 Gene3D G3DSA:3.40.630.30 3 142 4.2E-20 T 15-10-2018 Trad_1753 132ad7c45bd7f37dea87dafa71558609 151 SUPERFAMILY SSF55729 12 134 1.03E-21 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase Trad_1452 3e1328a7d7e3cb191e3635102d4843e1 346 TIGRFAM TIGR01898 cas_TM1791_cmr6: CRISPR type III-B/RAMP module RAMP protein Cmr6 82 252 4.4E-42 T 15-10-2018 IPR010172 CRISPR-associated protein, TM1791 Trad_1452 3e1328a7d7e3cb191e3635102d4843e1 346 Pfam PF03787 RAMP superfamily 89 252 1.1E-12 T 15-10-2018 IPR005537 CRISPR type III-associated RAMP protein Trad_0167 de6695a7e910ebccfd9efb137acce6aa 282 Pfam PF05258 Protein of unknown function (DUF721) 7 93 1.0E-15 T 15-10-2018 IPR007922 Protein of unknown function DUF721/UPF0232 Trad_2176 c43a404f719c0470d8f177c29bbc44ca 137 Hamap MF_00115 Large-conductance mechanosensitive channel [mscL]. 4 125 21.939 T 15-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 Trad_2176 c43a404f719c0470d8f177c29bbc44ca 137 SUPERFAMILY SSF81330 14 120 3.4E-30 T 15-10-2018 IPR036019 Gated mechanosensitive channel Trad_2176 c43a404f719c0470d8f177c29bbc44ca 137 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 4 123 7.7E-39 T 15-10-2018 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L Trad_2176 c43a404f719c0470d8f177c29bbc44ca 137 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 88 97 2.6E-9 T 15-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 Trad_2176 c43a404f719c0470d8f177c29bbc44ca 137 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 79 87 2.6E-9 T 15-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 Trad_2176 c43a404f719c0470d8f177c29bbc44ca 137 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 7 21 2.6E-9 T 15-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 Trad_2176 c43a404f719c0470d8f177c29bbc44ca 137 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 4 125 3.7E-37 T 15-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 Trad_2176 c43a404f719c0470d8f177c29bbc44ca 137 Gene3D G3DSA:1.10.1200.120 4 127 6.2E-36 T 15-10-2018 IPR036019 Gated mechanosensitive channel Trad_1549 dbfb9b16dbaaf7bfc7d69ebc75e30ca0 273 ProSitePatterns PS00018 EF-hand calcium-binding domain. 155 167 - T 15-10-2018 IPR018247 EF-Hand 1, calcium-binding site Trad_1549 dbfb9b16dbaaf7bfc7d69ebc75e30ca0 273 Gene3D G3DSA:1.10.1330.10 151 211 5.2E-8 T 15-10-2018 Trad_1549 dbfb9b16dbaaf7bfc7d69ebc75e30ca0 273 SUPERFAMILY SSF63446 152 201 2.65E-6 T 15-10-2018 IPR036439 Dockerin domain superfamily GO:0000272 Trad_1549 dbfb9b16dbaaf7bfc7d69ebc75e30ca0 273 SUPERFAMILY SSF55486 38 147 2.86E-5 T 15-10-2018 Trad_1132 49960364021a7cede8324f11792274d7 167 SMART SM00347 45 147 5.8E-19 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Trad_1132 49960364021a7cede8324f11792274d7 167 Gene3D G3DSA:1.10.10.10 10 155 7.0E-34 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Trad_1132 49960364021a7cede8324f11792274d7 167 SUPERFAMILY SSF46785 21 159 5.71E-30 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Trad_1132 49960364021a7cede8324f11792274d7 167 Pfam PF01047 MarR family 52 112 1.2E-12 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Trad_2192 4bfff4e249cee594716536a6e0aeb7b8 264 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 144 172 - T 15-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Trad_2192 4bfff4e249cee594716536a6e0aeb7b8 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 6.2E-10 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2192 4bfff4e249cee594716536a6e0aeb7b8 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 6.2E-10 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2192 4bfff4e249cee594716536a6e0aeb7b8 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 6.2E-10 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2192 4bfff4e249cee594716536a6e0aeb7b8 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 1.4E-36 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2192 4bfff4e249cee594716536a6e0aeb7b8 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 1.4E-36 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2192 4bfff4e249cee594716536a6e0aeb7b8 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.4E-36 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2192 4bfff4e249cee594716536a6e0aeb7b8 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 1.4E-36 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2192 4bfff4e249cee594716536a6e0aeb7b8 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 1.4E-36 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2192 4bfff4e249cee594716536a6e0aeb7b8 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 223 243 1.4E-36 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2192 4bfff4e249cee594716536a6e0aeb7b8 264 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 259 1.4E-54 T 15-10-2018 Trad_2192 4bfff4e249cee594716536a6e0aeb7b8 264 SUPERFAMILY SSF51735 6 260 3.36E-75 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_2192 4bfff4e249cee594716536a6e0aeb7b8 264 Gene3D G3DSA:3.40.50.720 1 263 2.1E-82 T 15-10-2018 Trad_0052 0e8cf441fc4d786965969889037c1e40 684 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 35 669 2.7E-198 T 15-10-2018 IPR011853 TRAP C4-dicarboxylate transport system permease, fused DctM-DctQ Trad_0052 0e8cf441fc4d786965969889037c1e40 684 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 134 590 2.5E-85 T 15-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit Trad_0097 7f63ca1872c475aabb3d87fc6af57c22 608 Gene3D G3DSA:1.25.40.10 95 277 2.0E-10 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Trad_0097 7f63ca1872c475aabb3d87fc6af57c22 608 SUPERFAMILY SSF53955 446 593 4.15E-39 T 15-10-2018 IPR023346 Lysozyme-like domain superfamily Trad_0097 7f63ca1872c475aabb3d87fc6af57c22 608 Pfam PF14559 Tetratricopeptide repeat 197 251 1.8E-5 T 15-10-2018 Trad_0097 7f63ca1872c475aabb3d87fc6af57c22 608 SUPERFAMILY SSF48452 117 238 1.08E-10 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Trad_0097 7f63ca1872c475aabb3d87fc6af57c22 608 Gene3D G3DSA:1.10.530.10 441 604 1.4E-41 T 15-10-2018 Trad_0097 7f63ca1872c475aabb3d87fc6af57c22 608 SUPERFAMILY SSF48452 190 336 2.11E-8 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Trad_0097 7f63ca1872c475aabb3d87fc6af57c22 608 Pfam PF01464 Transglycosylase SLT domain 452 549 3.1E-24 T 15-10-2018 IPR008258 Transglycosylase SLT domain 1 Trad_1267 1042e78e924a6a5af2e362fff9ea7055 323 Gene3D G3DSA:2.40.10.10 217 311 1.1E-8 T 15-10-2018 Trad_1267 1042e78e924a6a5af2e362fff9ea7055 323 Pfam PF13365 Trypsin-like peptidase domain 135 297 1.4E-6 T 15-10-2018 Trad_1267 1042e78e924a6a5af2e362fff9ea7055 323 SUPERFAMILY SSF50494 120 305 7.17E-15 T 15-10-2018 IPR009003 Peptidase S1, PA clan Trad_1309 6d26c915276ecc444072d71833115e14 279 SUPERFAMILY SSF54523 20 111 3.69E-7 T 15-10-2018 Trad_1309 6d26c915276ecc444072d71833115e14 279 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 18 38 1.3E-4 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site Trad_1309 6d26c915276ecc444072d71833115e14 279 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 18 38 - T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site Trad_1309 6d26c915276ecc444072d71833115e14 279 Pfam PF07963 Prokaryotic N-terminal methylation motif 16 38 1.1E-6 T 15-10-2018 IPR012902 Prokaryotic N-terminal methylation site Trad_0399 203e2b60d2db47b3ecd6209a5e8c397f 240 SUPERFAMILY SSF55174 88 233 2.75E-6 T 15-10-2018 Trad_0247 b7594c811b69108e1c8054b3dd01723e 224 Gene3D G3DSA:3.30.420.10 36 214 1.2E-35 T 15-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Trad_0247 b7594c811b69108e1c8054b3dd01723e 224 SUPERFAMILY SSF53098 37 210 1.95E-37 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily Trad_0247 b7594c811b69108e1c8054b3dd01723e 224 SMART SM00479 41 213 5.7E-24 T 15-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Trad_0247 b7594c811b69108e1c8054b3dd01723e 224 Pfam PF00929 Exonuclease 43 204 6.5E-15 T 15-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Trad_0561 0d8b04023853addae6a903560fa321a0 517 Pfam PF01694 Rhomboid family 343 478 8.3E-23 T 15-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 Trad_0561 0d8b04023853addae6a903560fa321a0 517 SUPERFAMILY SSF144091 296 477 1.96E-25 T 15-10-2018 Trad_0561 0d8b04023853addae6a903560fa321a0 517 Gene3D G3DSA:1.20.1540.10 290 484 3.4E-27 T 15-10-2018 IPR035952 Rhomboid-like superfamily Trad_1559 49802b5d4babb4962411deb3cb910f6d 334 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 1 160 0.0052 T 15-10-2018 Trad_1559 49802b5d4babb4962411deb3cb910f6d 334 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 229 2.3E-25 T 15-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 Trad_1559 49802b5d4babb4962411deb3cb910f6d 334 SUPERFAMILY SSF51735 2 324 2.41E-57 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_1559 49802b5d4babb4962411deb3cb910f6d 334 Gene3D G3DSA:3.40.50.720 1 328 1.4E-73 T 15-10-2018 Trad_1492 06312e6ddd685957eef68c9e5e33b08a 226 SMART SM00448 14 132 7.4E-23 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Trad_1492 06312e6ddd685957eef68c9e5e33b08a 226 Pfam PF00072 Response regulator receiver domain 16 132 5.2E-23 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Trad_1492 06312e6ddd685957eef68c9e5e33b08a 226 SUPERFAMILY SSF46894 146 224 5.78E-21 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Trad_1492 06312e6ddd685957eef68c9e5e33b08a 226 Pfam PF00196 Bacterial regulatory proteins, luxR family 162 217 2.2E-18 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Trad_1492 06312e6ddd685957eef68c9e5e33b08a 226 Gene3D G3DSA:3.40.50.12740 14 223 1.5E-64 T 15-10-2018 Trad_1492 06312e6ddd685957eef68c9e5e33b08a 226 ProSitePatterns PS00622 LuxR-type HTH domain signature. 177 204 - T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Trad_1492 06312e6ddd685957eef68c9e5e33b08a 226 SMART SM00421 160 217 4.8E-22 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Trad_1492 06312e6ddd685957eef68c9e5e33b08a 226 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 177 2.6E-13 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Trad_1492 06312e6ddd685957eef68c9e5e33b08a 226 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 177 193 2.6E-13 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Trad_1492 06312e6ddd685957eef68c9e5e33b08a 226 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 193 205 2.6E-13 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Trad_1492 06312e6ddd685957eef68c9e5e33b08a 226 SUPERFAMILY SSF52172 14 149 6.97E-30 T 15-10-2018 IPR011006 CheY-like superfamily Trad_0406 6c96d3e56db5181734252a92a18c698e 209 Pfam PF00535 Glycosyl transferase family 2 1 114 4.1E-16 T 15-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Trad_0406 6c96d3e56db5181734252a92a18c698e 209 Gene3D G3DSA:3.90.550.10 1 208 1.1E-35 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Trad_0406 6c96d3e56db5181734252a92a18c698e 209 SUPERFAMILY SSF53448 1 194 1.86E-31 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Trad_0160 95674576e4c178c0a2e45690592df445 304 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Trad_0160 95674576e4c178c0a2e45690592df445 304 SUPERFAMILY SSF52540 4 259 1.21E-56 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_0160 95674576e4c178c0a2e45690592df445 304 Pfam PF00005 ABC transporter 34 184 1.1E-26 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Trad_0160 95674576e4c178c0a2e45690592df445 304 SMART SM00382 39 234 1.2E-13 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_0160 95674576e4c178c0a2e45690592df445 304 Gene3D G3DSA:3.40.50.300 1 288 2.7E-69 T 15-10-2018 Trad_0190 152dd9ef21357ce731a67c2db0a9c5be 588 Pfam PF02080 TrkA-C domain 218 279 3.2E-8 T 15-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 Trad_0190 152dd9ef21357ce731a67c2db0a9c5be 588 Pfam PF02080 TrkA-C domain 308 369 4.5E-10 T 15-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 Trad_0190 152dd9ef21357ce731a67c2db0a9c5be 588 Pfam PF03600 Citrate transporter 18 535 4.2E-48 T 15-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 Trad_0190 152dd9ef21357ce731a67c2db0a9c5be 588 Gene3D G3DSA:3.30.70.1450 305 377 8.9E-14 T 15-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Trad_0190 152dd9ef21357ce731a67c2db0a9c5be 588 Gene3D G3DSA:3.30.70.1450 214 288 3.0E-12 T 15-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Trad_0190 152dd9ef21357ce731a67c2db0a9c5be 588 ProSitePatterns PS01271 Sodium:sulfate symporter family signature. 536 552 - T 15-10-2018 IPR031312 Sodium/sulphate symporter, conserved site Reactome: R-HSA-433137 Trad_0190 152dd9ef21357ce731a67c2db0a9c5be 588 SUPERFAMILY SSF116726 212 292 5.36E-16 T 15-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Trad_0190 152dd9ef21357ce731a67c2db0a9c5be 588 SUPERFAMILY SSF116726 296 383 6.15E-19 T 15-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Trad_2607 07f574a5c090d635999d5cf47c026bf4 211 SUPERFAMILY SSF53098 11 205 7.59E-61 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily Trad_2607 07f574a5c090d635999d5cf47c026bf4 211 Pfam PF01351 Ribonuclease HII 24 197 4.5E-30 T 15-10-2018 IPR024567 Ribonuclease HII/HIII domain Trad_2607 07f574a5c090d635999d5cf47c026bf4 211 Hamap MF_00052_B Ribonuclease HII [rnhB]. 22 200 31.248 T 15-10-2018 IPR022898 Ribonuclease HII GO:0004523 Trad_2607 07f574a5c090d635999d5cf47c026bf4 211 Gene3D G3DSA:3.30.420.10 8 210 2.9E-67 T 15-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Trad_0758 2f9c4e70cd229777c8ddfe43018962e6 353 PIRSF PIRSF001123 1 349 2.2E-96 T 15-10-2018 IPR008007 Peptidase M42 Trad_0758 2f9c4e70cd229777c8ddfe43018962e6 353 Gene3D G3DSA:3.40.630.10 7 337 5.6E-103 T 15-10-2018 Trad_0758 2f9c4e70cd229777c8ddfe43018962e6 353 SUPERFAMILY SSF101821 71 178 1.11E-26 T 15-10-2018 Trad_0758 2f9c4e70cd229777c8ddfe43018962e6 353 Pfam PF05343 M42 glutamyl aminopeptidase 55 337 8.6E-87 T 15-10-2018 IPR008007 Peptidase M42 Trad_0758 2f9c4e70cd229777c8ddfe43018962e6 353 SUPERFAMILY SSF53187 4 344 1.83E-56 T 15-10-2018 Trad_0758 2f9c4e70cd229777c8ddfe43018962e6 353 Gene3D G3DSA:2.40.30.40 70 161 5.6E-103 T 15-10-2018 IPR023367 Peptidase M42, domain 2 Trad_0798 e8acbee68134377eb7720810dd074ba5 266 Pfam PF00578 AhpC/TSA family 129 240 1.8E-16 T 15-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Trad_0798 e8acbee68134377eb7720810dd074ba5 266 Gene3D G3DSA:3.40.30.10 116 260 7.4E-35 T 15-10-2018 Trad_0798 e8acbee68134377eb7720810dd074ba5 266 SUPERFAMILY SSF52833 100 257 1.11E-35 T 15-10-2018 IPR036249 Thioredoxin-like superfamily Trad_0798 e8acbee68134377eb7720810dd074ba5 266 ProSitePatterns PS00194 Thioredoxin family active site. 153 171 - T 15-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 Trad_1252 0a9d564870d8f08cc97247199fcd4438 409 Pfam PF00801 PKD domain 149 205 7.7E-11 T 15-10-2018 IPR000601 PKD domain Trad_1252 0a9d564870d8f08cc97247199fcd4438 409 Gene3D G3DSA:2.60.120.560 185 409 4.8E-71 T 15-10-2018 Trad_1252 0a9d564870d8f08cc97247199fcd4438 409 SUPERFAMILY SSF49299 96 208 4.45E-18 T 15-10-2018 IPR035986 PKD domain superfamily Trad_1252 0a9d564870d8f08cc97247199fcd4438 409 Pfam PF06439 Domain of Unknown Function (DUF1080) 217 406 4.5E-36 T 15-10-2018 IPR010496 Domain of unknown function DUF1080 Trad_1252 0a9d564870d8f08cc97247199fcd4438 409 SMART SM00089 138 214 2.6E-10 T 15-10-2018 IPR022409 PKD/Chitinase domain Trad_1027 4209f344c0ea08fac313d42f32c31b38 217 Gene3D G3DSA:3.90.10.10 24 111 5.8E-9 T 15-10-2018 Trad_1027 4209f344c0ea08fac313d42f32c31b38 217 SUPERFAMILY SSF48695 40 186 1.15E-42 T 15-10-2018 IPR036280 Multiheme cytochrome superfamily Trad_1027 4209f344c0ea08fac313d42f32c31b38 217 Pfam PF14522 Cytochrome c7 and related cytochrome c 125 217 5.4E-7 T 15-10-2018 IPR029467 C-type polyheme cytochrome OmcB Trad_2993 69944aeea8645350a7de5635d4729e96 212 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 1 183 17.372 T 15-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 Trad_2993 69944aeea8645350a7de5635d4729e96 212 SUPERFAMILY SSF53335 12 142 3.8E-15 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Trad_2993 69944aeea8645350a7de5635d4729e96 212 Pfam PF02527 rRNA small subunit methyltransferase G 10 164 4.1E-25 T 15-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 Trad_2993 69944aeea8645350a7de5635d4729e96 212 Gene3D G3DSA:3.40.50.150 1 193 2.0E-31 T 15-10-2018 Trad_1863 0f244156278d596777a2bf1d55dc390a 74 Pfam PF10047 Protein of unknown function (DUF2281) 47 72 2.0E-6 T 15-10-2018 IPR018739 Domain of unknown function DUF2281 Trad_1075 a61634f9ac2f9e5d1529192b3ac99f0c 177 Gene3D G3DSA:1.10.10.10 71 169 4.6E-19 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Trad_1075 a61634f9ac2f9e5d1529192b3ac99f0c 177 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 109 123 4.4E-5 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Trad_1075 a61634f9ac2f9e5d1529192b3ac99f0c 177 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 123 139 4.4E-5 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Trad_1075 a61634f9ac2f9e5d1529192b3ac99f0c 177 SUPERFAMILY SSF46894 95 164 1.73E-16 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Trad_1075 a61634f9ac2f9e5d1529192b3ac99f0c 177 SMART SM00421 106 163 4.7E-16 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Trad_1075 a61634f9ac2f9e5d1529192b3ac99f0c 177 Pfam PF00196 Bacterial regulatory proteins, luxR family 108 160 6.6E-14 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Trad_0893 ac2f5fffa57e2c57b84ad4c030f8b292 372 Gene3D G3DSA:3.30.360.10 135 351 3.9E-35 T 15-10-2018 Trad_0893 ac2f5fffa57e2c57b84ad4c030f8b292 372 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 9 124 6.1E-21 T 15-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 Trad_0893 ac2f5fffa57e2c57b84ad4c030f8b292 372 SUPERFAMILY SSF51735 7 157 1.64E-38 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_0893 ac2f5fffa57e2c57b84ad4c030f8b292 372 SUPERFAMILY SSF55347 136 296 1.59E-28 T 15-10-2018 Trad_0893 ac2f5fffa57e2c57b84ad4c030f8b292 372 Gene3D G3DSA:3.40.50.720 2 130 6.7E-31 T 15-10-2018 Trad_0871 4b2e2d7b2585a72122179c549e1d46e9 437 Pfam PF00034 Cytochrome c 260 409 1.8E-4 T 15-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Trad_0871 4b2e2d7b2585a72122179c549e1d46e9 437 Pfam PF03150 Di-haem cytochrome c peroxidase 98 250 7.7E-38 T 15-10-2018 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 Trad_0871 4b2e2d7b2585a72122179c549e1d46e9 437 Gene3D G3DSA:1.10.760.10 239 412 1.8E-83 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Trad_0871 4b2e2d7b2585a72122179c549e1d46e9 437 Gene3D G3DSA:1.10.760.10 94 238 1.8E-83 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Trad_0871 4b2e2d7b2585a72122179c549e1d46e9 437 SUPERFAMILY SSF46626 77 239 3.0E-40 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Trad_0871 4b2e2d7b2585a72122179c549e1d46e9 437 SUPERFAMILY SSF46626 241 422 2.01E-32 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Trad_0871 4b2e2d7b2585a72122179c549e1d46e9 437 TIGRFAM TIGR04039 MXAN_0977_Heme2: di-heme enzyme, MXAN_0977 family 89 424 4.2E-156 T 15-10-2018 IPR023929 Di-heme enzyme, MXAN0977 Trad_0296 fa8a46b6e168bba25985674d22e42fab 288 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 105 281 3.5E-18 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Trad_0296 fa8a46b6e168bba25985674d22e42fab 288 Gene3D G3DSA:1.10.3720.10 12 275 4.5E-56 T 15-10-2018 IPR035906 MetI-like superfamily Trad_0296 fa8a46b6e168bba25985674d22e42fab 288 SUPERFAMILY SSF161098 17 288 3.74E-66 T 15-10-2018 IPR035906 MetI-like superfamily Trad_0464 db305b1ecef9db491e2343e3419db223 372 SUPERFAMILY SSF53822 96 363 1.88E-58 T 15-10-2018 IPR028082 Periplasmic binding protein-like I Trad_0464 db305b1ecef9db491e2343e3419db223 372 SUPERFAMILY SSF46785 14 97 1.44E-20 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Trad_0464 db305b1ecef9db491e2343e3419db223 372 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 58 74 8.3E-8 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Trad_0464 db305b1ecef9db491e2343e3419db223 372 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 44 58 8.3E-8 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Trad_0464 db305b1ecef9db491e2343e3419db223 372 Gene3D G3DSA:3.40.50.2300 195 358 2.4E-68 T 15-10-2018 Trad_0464 db305b1ecef9db491e2343e3419db223 372 Pfam PF00392 Bacterial regulatory proteins, gntR family 23 84 1.7E-15 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Trad_0464 db305b1ecef9db491e2343e3419db223 372 Gene3D G3DSA:1.10.10.10 8 85 1.2E-21 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Trad_0464 db305b1ecef9db491e2343e3419db223 372 Pfam PF13377 Periplasmic binding protein-like domain 203 361 2.7E-34 T 15-10-2018 Trad_0464 db305b1ecef9db491e2343e3419db223 372 Gene3D G3DSA:3.40.50.2300 98 353 2.4E-68 T 15-10-2018 Trad_0464 db305b1ecef9db491e2343e3419db223 372 SMART SM00345 25 84 5.8E-15 T 15-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Trad_2645 1c96fe825e39a73d095c3ff4c34c8256 125 Gene3D G3DSA:1.10.287.1080 22 118 3.2E-15 T 15-10-2018 Trad_2645 1c96fe825e39a73d095c3ff4c34c8256 125 PIRSF PIRSF006639 16 125 2.3E-34 T 15-10-2018 IPR011379 NTP Pyrophosphohydrolase MazG-related, GP37 Trad_2645 1c96fe825e39a73d095c3ff4c34c8256 125 SUPERFAMILY SSF101386 16 113 5.89E-19 T 15-10-2018 Trad_2645 1c96fe825e39a73d095c3ff4c34c8256 125 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 44 113 6.6E-13 T 15-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core Trad_0782 24148022ea29594592951237d1b60093 144 SUPERFAMILY SSF82649 2 139 1.36E-28 T 15-10-2018 Trad_0782 24148022ea29594592951237d1b60093 144 Gene3D G3DSA:3.90.1010.10 2 141 1.1E-47 T 15-10-2018 Trad_0782 24148022ea29594592951237d1b60093 144 Pfam PF02657 Fe-S metabolism associated domain 12 136 8.6E-29 T 15-10-2018 IPR003808 Fe-S metabolism associated domain, SufE-like Trad_2786 d16e11dc270a549ef6115d53a0a89c04 247 SUPERFAMILY SSF53633 2 231 1.57E-72 T 15-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Trad_2786 d16e11dc270a549ef6115d53a0a89c04 247 PIRSF PIRSF005650 1 239 1.7E-90 T 15-10-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 Trad_2786 d16e11dc270a549ef6115d53a0a89c04 247 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 2 230 7.0E-90 T 15-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 Trad_2786 d16e11dc270a549ef6115d53a0a89c04 247 Gene3D G3DSA:3.40.1160.10 1 236 1.9E-80 T 15-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Trad_2786 d16e11dc270a549ef6115d53a0a89c04 247 Hamap MF_01220_B Uridylate kinase [pyrH]. 1 231 41.714 T 15-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 Trad_2786 d16e11dc270a549ef6115d53a0a89c04 247 Pfam PF00696 Amino acid kinase family 2 210 7.7E-31 T 15-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 Trad_2178 77c75c82f3b6b32537f906bf5238e29e 302 SUPERFAMILY SSF52402 13 173 1.09E-18 T 15-10-2018 Trad_2178 77c75c82f3b6b32537f906bf5238e29e 302 Pfam PF00582 Universal stress protein family 180 300 3.7E-13 T 15-10-2018 IPR006016 UspA Trad_2178 77c75c82f3b6b32537f906bf5238e29e 302 Pfam PF00582 Universal stress protein family 13 173 1.8E-12 T 15-10-2018 IPR006016 UspA Trad_2178 77c75c82f3b6b32537f906bf5238e29e 302 Gene3D G3DSA:3.40.50.12370 11 301 4.2E-62 T 15-10-2018 Trad_2178 77c75c82f3b6b32537f906bf5238e29e 302 SUPERFAMILY SSF52402 178 300 1.42E-18 T 15-10-2018 Trad_2178 77c75c82f3b6b32537f906bf5238e29e 302 PRINTS PR01438 Universal stress protein signature 133 145 9.3E-7 T 15-10-2018 IPR006015 Universal stress protein A Trad_2178 77c75c82f3b6b32537f906bf5238e29e 302 PRINTS PR01438 Universal stress protein signature 8 26 9.3E-7 T 15-10-2018 IPR006015 Universal stress protein A Trad_2178 77c75c82f3b6b32537f906bf5238e29e 302 PRINTS PR01438 Universal stress protein signature 151 173 9.3E-7 T 15-10-2018 IPR006015 Universal stress protein A Trad_0876 6542d019dc626464a84eab44d29f67fc 128 Pfam PF11162 Protein of unknown function (DUF2946) 17 125 8.9E-6 T 15-10-2018 IPR021333 Protein of unknown function DUF2946 Trad_2809 68e14c48b21f2789d704997e06bc71fe 112 Gene3D G3DSA:3.30.70.2290 7 112 2.1E-31 T 15-10-2018 Trad_2809 68e14c48b21f2789d704997e06bc71fe 112 Pfam PF11482 Protein of unknown function (DUF3208) 8 112 7.3E-42 T 15-10-2018 IPR021576 Protein of unknown function DUF3208 Trad_0655 74a963787ff542d00dfa88e86fb9de50 400 SUPERFAMILY SSF103473 10 374 1.31E-42 T 15-10-2018 IPR036259 MFS transporter superfamily Trad_0655 74a963787ff542d00dfa88e86fb9de50 400 Gene3D G3DSA:1.20.1250.20 193 379 5.4E-33 T 15-10-2018 Trad_0655 74a963787ff542d00dfa88e86fb9de50 400 Gene3D G3DSA:1.20.1250.20 6 181 1.6E-23 T 15-10-2018 Trad_0655 74a963787ff542d00dfa88e86fb9de50 400 Pfam PF12832 MFS_1 like family 8 355 8.3E-57 T 15-10-2018 IPR024989 Major facilitator superfamily associated domain Trad_0655 74a963787ff542d00dfa88e86fb9de50 400 ProSitePatterns PS00216 Sugar transport proteins signature 1. 57 73 - T 15-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 Trad_1250 7faed5cefb6d135f531d69b850d07698 318 Gene3D G3DSA:3.40.50.300 38 317 5.4E-67 T 15-10-2018 Trad_1250 7faed5cefb6d135f531d69b850d07698 318 Pfam PF00685 Sulfotransferase domain 52 236 5.1E-20 T 15-10-2018 IPR000863 Sulfotransferase domain GO:0008146 Trad_1250 7faed5cefb6d135f531d69b850d07698 318 SUPERFAMILY SSF52540 49 317 1.33E-65 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_1346 fda54d161796268a2f7689b0156a1738 111 SUPERFAMILY SSF64376 6 70 1.28E-13 T 15-10-2018 IPR035931 YlxR-like superfamily Trad_1346 fda54d161796268a2f7689b0156a1738 111 Gene3D G3DSA:3.30.1230.10 2 89 1.8E-12 T 15-10-2018 IPR035931 YlxR-like superfamily Trad_1346 fda54d161796268a2f7689b0156a1738 111 Pfam PF04296 Protein of unknown function (DUF448) 11 72 4.7E-12 T 15-10-2018 IPR007393 Domain of unknown function DUF448 Trad_0962 b64fc379e87e30469b78ca12a28ffb20 185 Gene3D G3DSA:3.40.430.10 2 182 1.3E-44 T 15-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 Trad_0962 b64fc379e87e30469b78ca12a28ffb20 185 SUPERFAMILY SSF53597 3 183 4.97E-31 T 15-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 Trad_0962 b64fc379e87e30469b78ca12a28ffb20 185 Pfam PF01872 RibD C-terminal domain 3 178 3.7E-26 T 15-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 Trad_1614 5ee12715bc678978aaa6411198a555ca 241 SUPERFAMILY SSF55315 1 71 6.73E-15 T 15-10-2018 IPR029064 50S ribosomal protein L30e-like Trad_1614 5ee12715bc678978aaa6411198a555ca 241 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 2 75 1.1E-14 T 15-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 Trad_1614 5ee12715bc678978aaa6411198a555ca 241 SUPERFAMILY SSF75217 74 237 9.16E-44 T 15-10-2018 IPR029028 Alpha/beta knot methyltransferases Trad_1614 5ee12715bc678978aaa6411198a555ca 241 Pfam PF00588 SpoU rRNA Methylase family 93 233 1.5E-38 T 15-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 Trad_1614 5ee12715bc678978aaa6411198a555ca 241 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 2 237 1.3E-71 T 15-10-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 Trad_1614 5ee12715bc678978aaa6411198a555ca 241 SMART SM00967 2 76 7.3E-16 T 15-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 Trad_1614 5ee12715bc678978aaa6411198a555ca 241 Gene3D G3DSA:3.30.1330.30 1 71 8.3E-11 T 15-10-2018 IPR029064 50S ribosomal protein L30e-like Trad_1614 5ee12715bc678978aaa6411198a555ca 241 Gene3D G3DSA:3.40.1280.10 78 240 3.4E-56 T 15-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Trad_2092 8e24c66b0b8cb824167c5bf2c3444887 458 Pfam PF00232 Glycosyl hydrolase family 1 16 451 1.1E-166 T 15-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 Trad_2092 8e24c66b0b8cb824167c5bf2c3444887 458 PRINTS PR00131 Glycosyl hydrolase family 1 signature 397 414 2.2E-23 T 15-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 Trad_2092 8e24c66b0b8cb824167c5bf2c3444887 458 PRINTS PR00131 Glycosyl hydrolase family 1 signature 376 387 2.2E-23 T 15-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 Trad_2092 8e24c66b0b8cb824167c5bf2c3444887 458 PRINTS PR00131 Glycosyl hydrolase family 1 signature 421 433 2.2E-23 T 15-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 Trad_2092 8e24c66b0b8cb824167c5bf2c3444887 458 PRINTS PR00131 Glycosyl hydrolase family 1 signature 296 310 2.2E-23 T 15-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 Trad_2092 8e24c66b0b8cb824167c5bf2c3444887 458 PRINTS PR00131 Glycosyl hydrolase family 1 signature 356 364 2.2E-23 T 15-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 Trad_2092 8e24c66b0b8cb824167c5bf2c3444887 458 TIGRFAM TIGR03356 BGL: beta-galactosidase 17 443 3.0E-196 T 15-10-2018 IPR017736 Glycoside hydrolase, family 1, beta-glucosidase GO:0008422|GO:0030245 KEGG: 00460+3.2.1.21|KEGG: 00500+3.2.1.21|KEGG: 00940+3.2.1.21|MetaCyc: PWY-3121|MetaCyc: PWY-5176|MetaCyc: PWY-6002|MetaCyc: PWY-6788|MetaCyc: PWY-7091|MetaCyc: PWY-7092|MetaCyc: PWY-7913 Trad_2092 8e24c66b0b8cb824167c5bf2c3444887 458 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 21 35 - T 15-10-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site Trad_2092 8e24c66b0b8cb824167c5bf2c3444887 458 Gene3D G3DSA:3.20.20.80 7 456 7.5E-174 T 15-10-2018 Trad_2092 8e24c66b0b8cb824167c5bf2c3444887 458 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 356 364 - T 15-10-2018 IPR018120 Glycoside hydrolase family 1, active site Trad_2092 8e24c66b0b8cb824167c5bf2c3444887 458 SUPERFAMILY SSF51445 17 452 1.7E-166 T 15-10-2018 IPR017853 Glycoside hydrolase superfamily Trad_0910 26696e8df83f75219600579d11bab11b 235 Gene3D G3DSA:3.40.1390.30 83 207 1.4E-14 T 15-10-2018 Trad_0910 26696e8df83f75219600579d11bab11b 235 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 76 225 2.7E-15 T 15-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 Trad_0910 26696e8df83f75219600579d11bab11b 235 Gene3D G3DSA:3.40.1390.30 74 222 1.4E-14 T 15-10-2018 Trad_0910 26696e8df83f75219600579d11bab11b 235 SUPERFAMILY SSF102705 9 230 1.7E-27 T 15-10-2018 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily Trad_0010 e9287d5d801615d92df24363c4a42fbe 98 Pfam PF03795 YCII-related domain 1 91 8.3E-11 T 15-10-2018 IPR005545 YCII-related Trad_0010 e9287d5d801615d92df24363c4a42fbe 98 Gene3D G3DSA:3.30.70.1060 1 94 4.9E-24 T 15-10-2018 Trad_0010 e9287d5d801615d92df24363c4a42fbe 98 SUPERFAMILY SSF54909 3 92 8.85E-19 T 15-10-2018 IPR011008 Dimeric alpha-beta barrel Trad_0695 7fa147bba00c1e169b6e0af131f565b2 331 Pfam PF02653 Branched-chain amino acid transport system / permease component 44 321 3.4E-41 T 15-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Trad_0819 29bf4029b97d3ca9411c8866eaca5d36 103 SUPERFAMILY SSF103007 4 96 7.59E-24 T 15-10-2018 IPR036746 TT1725-like superfamily Trad_0819 29bf4029b97d3ca9411c8866eaca5d36 103 Gene3D G3DSA:3.30.70.1120 2 102 2.3E-26 T 15-10-2018 IPR036746 TT1725-like superfamily Trad_0819 29bf4029b97d3ca9411c8866eaca5d36 103 Pfam PF04456 Protein of unknown function (DUF503) 6 92 7.0E-23 T 15-10-2018 IPR007546 Protein of unknown function DUF503 Trad_2827 c298fcce1e8a15e961468a709de5f474 210 SUPERFAMILY SSF52540 1 199 6.72E-42 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_2827 c298fcce1e8a15e961468a709de5f474 210 PIRSF PIRSF000705 1 203 1.9E-58 T 15-10-2018 IPR002624 Deoxynucleoside kinase GO:0005524|GO:0006139|GO:0019206 Trad_2827 c298fcce1e8a15e961468a709de5f474 210 Gene3D G3DSA:3.40.50.300 1 201 3.9E-50 T 15-10-2018 Trad_2827 c298fcce1e8a15e961468a709de5f474 210 Pfam PF01712 Deoxynucleoside kinase 4 195 1.8E-51 T 15-10-2018 IPR031314 Deoxynucleoside kinase domain Trad_1384 f582e2761261236cbbf929d27990ee75 540 Pfam PF00174 Oxidoreductase molybdopterin binding domain 270 417 5.0E-35 T 15-10-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 Trad_1384 f582e2761261236cbbf929d27990ee75 540 SUPERFAMILY SSF81296 427 520 7.7E-18 T 15-10-2018 IPR014756 Immunoglobulin E-set Trad_1384 f582e2761261236cbbf929d27990ee75 540 Gene3D G3DSA:3.90.420.10 207 428 2.4E-40 T 15-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 Trad_1384 f582e2761261236cbbf929d27990ee75 540 Gene3D G3DSA:2.60.40.650 431 540 1.7E-18 T 15-10-2018 Trad_1384 f582e2761261236cbbf929d27990ee75 540 SUPERFAMILY SSF56524 249 425 1.57E-49 T 15-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 Trad_0124 62da30a8ffcd317a6733b45b6af2031e 284 SUPERFAMILY SSF161098 21 275 5.33E-55 T 15-10-2018 IPR035906 MetI-like superfamily Trad_0124 62da30a8ffcd317a6733b45b6af2031e 284 Gene3D G3DSA:1.10.3720.10 11 284 8.0E-55 T 15-10-2018 IPR035906 MetI-like superfamily Trad_0124 62da30a8ffcd317a6733b45b6af2031e 284 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 87 279 6.7E-18 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Trad_0156 bf10f109eb74e79a0359b7ed004b2239 633 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 95 527 3.4E-59 T 15-10-2018 IPR000914 Solute-binding protein family 5 domain Trad_0156 bf10f109eb74e79a0359b7ed004b2239 633 SUPERFAMILY SSF53850 36 619 1.68E-88 T 15-10-2018 Trad_0156 bf10f109eb74e79a0359b7ed004b2239 633 Gene3D G3DSA:3.10.105.10 307 589 1.5E-41 T 15-10-2018 Trad_0156 bf10f109eb74e79a0359b7ed004b2239 633 PIRSF PIRSF002741 7 622 2.1E-55 T 15-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Trad_0156 bf10f109eb74e79a0359b7ed004b2239 633 Gene3D G3DSA:3.40.190.10 10 295 2.8E-45 T 15-10-2018 Trad_1202 39913d8e8937de8ff2f4f7d40af7e4dd 396 Gene3D G3DSA:3.40.190.10 39 355 3.4E-106 T 15-10-2018 Trad_1202 39913d8e8937de8ff2f4f7d40af7e4dd 396 PRINTS PR00181 Maltose binding protein signature 148 167 1.5E-10 T 15-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 Trad_1202 39913d8e8937de8ff2f4f7d40af7e4dd 396 PRINTS PR00181 Maltose binding protein signature 232 251 1.5E-10 T 15-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 Trad_1202 39913d8e8937de8ff2f4f7d40af7e4dd 396 PRINTS PR00181 Maltose binding protein signature 127 146 1.5E-10 T 15-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 Trad_1202 39913d8e8937de8ff2f4f7d40af7e4dd 396 PRINTS PR00181 Maltose binding protein signature 355 374 1.5E-10 T 15-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 Trad_1202 39913d8e8937de8ff2f4f7d40af7e4dd 396 Pfam PF13416 Bacterial extracellular solute-binding protein 42 339 1.6E-40 T 15-10-2018 IPR006059 Bacterial extracellular solute-binding protein Trad_1202 39913d8e8937de8ff2f4f7d40af7e4dd 396 Gene3D G3DSA:3.40.190.10 136 371 3.4E-106 T 15-10-2018 Trad_1202 39913d8e8937de8ff2f4f7d40af7e4dd 396 SUPERFAMILY SSF53850 24 393 7.25E-75 T 15-10-2018 Trad_0375 408aa5c87dfd7bb746264dd882017cc6 350 Hamap MF_00230 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [cobT]. 16 350 35.48 T 15-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 Trad_0375 408aa5c87dfd7bb746264dd882017cc6 350 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 18 349 1.6E-131 T 15-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 Trad_0375 408aa5c87dfd7bb746264dd882017cc6 350 Pfam PF02277 Phosphoribosyltransferase 15 349 1.5E-129 T 15-10-2018 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 Trad_0375 408aa5c87dfd7bb746264dd882017cc6 350 Gene3D G3DSA:3.40.50.10210 60 333 2.2E-129 T 15-10-2018 Trad_0375 408aa5c87dfd7bb746264dd882017cc6 350 Gene3D G3DSA:1.10.1610.10 28 349 2.2E-129 T 15-10-2018 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 Trad_0375 408aa5c87dfd7bb746264dd882017cc6 350 SUPERFAMILY SSF52733 10 349 9.02E-113 T 15-10-2018 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 Trad_1232 4725b19aabbaf927adb46ae71666380d 623 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 217 350 1.8E-36 T 15-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 Trad_1232 4725b19aabbaf927adb46ae71666380d 623 Gene3D G3DSA:3.40.50.1220 214 381 4.0E-42 T 15-10-2018 Trad_1232 4725b19aabbaf927adb46ae71666380d 623 Gene3D G3DSA:3.40.50.970 1 206 9.3E-26 T 15-10-2018 Trad_1232 4725b19aabbaf927adb46ae71666380d 623 TIGRFAM TIGR04377 myo_inos_iolD: 3,5/4-trihydroxycyclohexa-1,2-dione hydrolase 2 615 2.2E-266 T 15-10-2018 IPR030817 3,5/4-Trihydroxycyclohexa-1,2-dione hydrolase GO:0016823|GO:0019310|GO:0030976 KEGG: 00562+3.7.1.22 Trad_1232 4725b19aabbaf927adb46ae71666380d 623 Gene3D G3DSA:3.40.50.970 386 580 1.0E-47 T 15-10-2018 Trad_1232 4725b19aabbaf927adb46ae71666380d 623 SUPERFAMILY SSF52518 390 606 4.52E-52 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold Trad_1232 4725b19aabbaf927adb46ae71666380d 623 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 4 196 7.0E-32 T 15-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 Trad_1232 4725b19aabbaf927adb46ae71666380d 623 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 413 571 5.6E-36 T 15-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 Trad_1232 4725b19aabbaf927adb46ae71666380d 623 SUPERFAMILY SSF52518 2 208 1.91E-27 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold Trad_1232 4725b19aabbaf927adb46ae71666380d 623 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 449 468 - T 15-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 Trad_1232 4725b19aabbaf927adb46ae71666380d 623 SUPERFAMILY SSF52467 180 381 2.91E-45 T 15-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily Trad_2267 2333eab8faad6f4e45a5d705f3d32db6 326 SUPERFAMILY SSF55781 68 319 1.16E-21 T 15-10-2018 Trad_2267 2333eab8faad6f4e45a5d705f3d32db6 326 Gene3D G3DSA:1.10.10.10 1 79 1.9E-24 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Trad_2267 2333eab8faad6f4e45a5d705f3d32db6 326 Pfam PF08220 DeoR-like helix-turn-helix domain 20 58 1.9E-4 T 15-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Trad_2267 2333eab8faad6f4e45a5d705f3d32db6 326 SUPERFAMILY SSF46785 3 79 3.83E-18 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Trad_2267 2333eab8faad6f4e45a5d705f3d32db6 326 PIRSF PIRSF005485 1 321 4.4E-46 T 15-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 Trad_2267 2333eab8faad6f4e45a5d705f3d32db6 326 Hamap MF_00081 Heat-inducible transcription repressor HrcA [hrcA]. 1 311 17.043 T 15-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 Trad_2267 2333eab8faad6f4e45a5d705f3d32db6 326 Pfam PF01628 HrcA protein C terminal domain 100 302 5.0E-20 T 15-10-2018 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal GO:0003677|GO:0006355 Trad_0042 aa6d68500e324059c81bf004021f762f 114 SMART SM00418 6 93 1.6E-21 T 15-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Trad_0042 aa6d68500e324059c81bf004021f762f 114 Pfam PF12840 Helix-turn-helix domain 7 73 9.1E-15 T 15-10-2018 Trad_0042 aa6d68500e324059c81bf004021f762f 114 Gene3D G3DSA:1.10.10.10 1 100 9.5E-27 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Trad_0042 aa6d68500e324059c81bf004021f762f 114 SUPERFAMILY SSF46785 2 95 1.22E-22 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Trad_2286 54cc6c0f41e35c09f4e535739cfe3847 79 PRINTS PR01651 Protein-export SecG membrane protein signature 26 40 2.7E-7 T 15-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 Trad_2286 54cc6c0f41e35c09f4e535739cfe3847 79 PRINTS PR01651 Protein-export SecG membrane protein signature 57 79 2.7E-7 T 15-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 Trad_2286 54cc6c0f41e35c09f4e535739cfe3847 79 PRINTS PR01651 Protein-export SecG membrane protein signature 6 26 2.7E-7 T 15-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 Trad_2286 54cc6c0f41e35c09f4e535739cfe3847 79 Pfam PF03840 Preprotein translocase SecG subunit 8 75 8.2E-16 T 15-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 Trad_2286 54cc6c0f41e35c09f4e535739cfe3847 79 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 7 76 3.7E-17 T 15-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 Trad_1299 9dca68f99eef70ba4b1cbf503d796463 745 Gene3D G3DSA:3.40.50.300 3 284 1.8E-57 T 15-10-2018 Trad_1299 9dca68f99eef70ba4b1cbf503d796463 745 Pfam PF00005 ABC transporter 21 186 2.4E-24 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Trad_1299 9dca68f99eef70ba4b1cbf503d796463 745 Gene3D G3DSA:3.40.50.300 301 524 7.9E-44 T 15-10-2018 Trad_1299 9dca68f99eef70ba4b1cbf503d796463 745 ProSitePatterns PS00211 ABC transporters family signature. 434 448 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Trad_1299 9dca68f99eef70ba4b1cbf503d796463 745 SUPERFAMILY SSF52540 4 247 3.68E-41 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_1299 9dca68f99eef70ba4b1cbf503d796463 745 ProSitePatterns PS00211 ABC transporters family signature. 159 173 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Trad_1299 9dca68f99eef70ba4b1cbf503d796463 745 Pfam PF00005 ABC transporter 336 461 3.3E-17 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Trad_1299 9dca68f99eef70ba4b1cbf503d796463 745 SMART SM00382 343 507 3.0E-16 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_1299 9dca68f99eef70ba4b1cbf503d796463 745 SMART SM00382 30 231 1.0E-13 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_1299 9dca68f99eef70ba4b1cbf503d796463 745 SUPERFAMILY SSF52540 311 512 4.79E-40 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_2079 1ceda678da035fff351b5f81a85002e6 886 SMART SM00642 8 470 2.5E-5 T 15-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Trad_2079 1ceda678da035fff351b5f81a85002e6 886 Gene3D G3DSA:3.30.1590.10 90 198 9.2E-17 T 15-10-2018 Trad_2079 1ceda678da035fff351b5f81a85002e6 886 TIGRFAM TIGR02401 trehalose_TreY: malto-oligosyltrehalose synthase 2 841 1.2E-261 T 15-10-2018 IPR012767 Maltooligosyl trehalose synthase KEGG: 00500+5.4.99.15|MetaCyc: PWY-2661 Trad_2079 1ceda678da035fff351b5f81a85002e6 886 SUPERFAMILY SSF51445 5 798 1.57E-114 T 15-10-2018 IPR017853 Glycoside hydrolase superfamily Trad_2079 1ceda678da035fff351b5f81a85002e6 886 Gene3D G3DSA:3.20.20.80 647 799 4.3E-33 T 15-10-2018 Trad_2079 1ceda678da035fff351b5f81a85002e6 886 Gene3D G3DSA:3.20.20.80 245 411 2.7E-28 T 15-10-2018 Trad_2079 1ceda678da035fff351b5f81a85002e6 886 Gene3D G3DSA:3.20.20.80 15 88 1.5E-17 T 15-10-2018 Trad_2079 1ceda678da035fff351b5f81a85002e6 886 Pfam PF00128 Alpha amylase, catalytic domain 22 91 1.9E-17 T 15-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Trad_1382 cfd22f3dfc089c0fad224d962571ff96 134 Pfam PF03061 Thioesterase superfamily 17 101 1.1E-14 T 15-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 Trad_1382 cfd22f3dfc089c0fad224d962571ff96 134 Gene3D G3DSA:3.10.129.10 2 132 1.3E-37 T 15-10-2018 Trad_1382 cfd22f3dfc089c0fad224d962571ff96 134 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 7 111 1.3E-24 T 15-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 Trad_1382 cfd22f3dfc089c0fad224d962571ff96 134 SUPERFAMILY SSF54637 4 129 2.96E-37 T 15-10-2018 IPR029069 HotDog domain superfamily Trad_1382 cfd22f3dfc089c0fad224d962571ff96 134 PIRSF PIRSF003230 2 134 1.5E-37 T 15-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 Trad_2454 9f8e58e89b5abd9bf02d392307db1716 130 Gene3D G3DSA:3.40.50.1010 1 130 3.2E-11 T 15-10-2018 Trad_2454 9f8e58e89b5abd9bf02d392307db1716 130 SUPERFAMILY SSF88723 1 121 1.26E-17 T 15-10-2018 IPR029060 PIN-like domain superfamily Trad_2454 9f8e58e89b5abd9bf02d392307db1716 130 Pfam PF01850 PIN domain 4 120 4.4E-10 T 15-10-2018 IPR002716 PIN domain Trad_2309 8947ad49f43014b039060976e42380ee 196 Gene3D G3DSA:1.10.520.40 2 196 1.6E-62 T 15-10-2018 IPR038287 Cse2 superfamily Trad_2309 8947ad49f43014b039060976e42380ee 196 TIGRFAM TIGR02548 casB_cse2: CRISPR type I-E/ECOLI-associated protein CasB/Cse2 9 185 4.6E-16 T 15-10-2018 IPR013382 CRISPR-associated protein Cse2 Trad_2309 8947ad49f43014b039060976e42380ee 196 Pfam PF09485 CRISPR-associated protein Cse2 (CRISPR_cse2) 21 183 4.4E-34 T 15-10-2018 IPR013382 CRISPR-associated protein Cse2 Trad_1526 77afc0b362b62899782fe59b5dbc8563 254 SUPERFAMILY SSF88713 4 254 8.15E-89 T 15-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 Trad_1526 77afc0b362b62899782fe59b5dbc8563 254 Gene3D G3DSA:3.20.20.370 3 254 1.6E-97 T 15-10-2018 Trad_1526 77afc0b362b62899782fe59b5dbc8563 254 Pfam PF03746 LamB/YcsF family 5 244 2.9E-94 T 15-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 Trad_1526 77afc0b362b62899782fe59b5dbc8563 254 Hamap MF_00691 UPF0271 protein YbgL [ybgL]. 3 249 44.814 T 15-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 Trad_2453 eb61d98bfbb2ac138a8718fc3d102725 75 SUPERFAMILY SSF143120 1 45 1.31E-11 T 15-10-2018 IPR036165 YefM-like superfamily Trad_2453 eb61d98bfbb2ac138a8718fc3d102725 75 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 4 42 3.8E-11 T 15-10-2018 Trad_2453 eb61d98bfbb2ac138a8718fc3d102725 75 Gene3D G3DSA:3.40.1620.10 1 40 5.7E-14 T 15-10-2018 Trad_2453 eb61d98bfbb2ac138a8718fc3d102725 75 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 47 1.2E-13 T 15-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM Trad_0598 f9027168ff77dd04c702144ae0efb93b 512 SUPERFAMILY SSF52540 22 487 1.05E-16 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_0598 f9027168ff77dd04c702144ae0efb93b 512 SMART SM00491 371 493 2.9E-18 T 15-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 Trad_0598 f9027168ff77dd04c702144ae0efb93b 512 Pfam PF04851 Type III restriction enzyme, res subunit 7 157 9.6E-7 T 15-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 Trad_0598 f9027168ff77dd04c702144ae0efb93b 512 Pfam PF13307 Helicase C-terminal domain 354 506 7.8E-18 T 15-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 Trad_0598 f9027168ff77dd04c702144ae0efb93b 512 Gene3D G3DSA:3.40.50.300 98 181 1.2E-7 T 15-10-2018 Trad_0598 f9027168ff77dd04c702144ae0efb93b 512 Gene3D G3DSA:3.40.50.300 7 97 5.2E-8 T 15-10-2018 Trad_0598 f9027168ff77dd04c702144ae0efb93b 512 Gene3D G3DSA:3.40.50.300 329 510 2.1E-15 T 15-10-2018 Trad_1083 66c02d0a721c103cbce84e1d72839f99 169 Pfam PF12867 DinB superfamily 20 164 6.5E-10 T 15-10-2018 IPR024775 DinB-like domain Trad_1083 66c02d0a721c103cbce84e1d72839f99 169 SUPERFAMILY SSF109854 14 168 2.01E-15 T 15-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes Trad_1083 66c02d0a721c103cbce84e1d72839f99 169 Gene3D G3DSA:1.20.120.450 5 168 1.9E-27 T 15-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes Trad_2068 713d5a29706e52ab5cf819f531ebe0e0 136 SUPERFAMILY SSF55811 5 134 5.15E-29 T 15-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Trad_2068 713d5a29706e52ab5cf819f531ebe0e0 136 Pfam PF00293 NUDIX domain 10 123 4.8E-18 T 15-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Trad_2068 713d5a29706e52ab5cf819f531ebe0e0 136 ProSitePatterns PS00893 Nudix box signature. 43 64 - T 15-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 Trad_2068 713d5a29706e52ab5cf819f531ebe0e0 136 Gene3D G3DSA:3.90.79.10 5 131 1.3E-28 T 15-10-2018 Trad_2052 359f35f2e651196c8d60736a83674283 320 Pfam PF02504 Fatty acid synthesis protein 2 302 3.3E-91 T 15-10-2018 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 Trad_2052 359f35f2e651196c8d60736a83674283 320 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 319 123.268 T 15-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 Trad_2052 359f35f2e651196c8d60736a83674283 320 Gene3D G3DSA:3.40.718.10 1 319 4.8E-117 T 15-10-2018 Trad_2052 359f35f2e651196c8d60736a83674283 320 SUPERFAMILY SSF53659 2 310 4.52E-85 T 15-10-2018 Trad_2052 359f35f2e651196c8d60736a83674283 320 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 2 317 3.6E-96 T 15-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 Trad_2052 359f35f2e651196c8d60736a83674283 320 PIRSF PIRSF002465 1 319 9.4E-109 T 15-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 Trad_0025 1dffce7427e49847cafe188e17345a5a 190 Pfam PF01467 Cytidylyltransferase-like 5 164 1.1E-25 T 15-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 Trad_0025 1dffce7427e49847cafe188e17345a5a 190 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 1 190 30.386 T 15-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 Trad_0025 1dffce7427e49847cafe188e17345a5a 190 SUPERFAMILY SSF52374 3 190 6.88E-49 T 15-10-2018 Trad_0025 1dffce7427e49847cafe188e17345a5a 190 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 5 189 3.2E-51 T 15-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 Trad_0025 1dffce7427e49847cafe188e17345a5a 190 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 4 61 9.0E-8 T 15-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 Trad_0025 1dffce7427e49847cafe188e17345a5a 190 Gene3D G3DSA:3.40.50.620 1 190 4.5E-58 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Trad_1565 71459c6081df85205bbfdd5dc4779bbc 864 Pfam PF02687 FtsX-like permease family 293 388 5.2E-7 T 15-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Trad_1565 71459c6081df85205bbfdd5dc4779bbc 864 Pfam PF02687 FtsX-like permease family 764 857 5.6E-11 T 15-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Trad_1565 71459c6081df85205bbfdd5dc4779bbc 864 Pfam PF12704 MacB-like periplasmic core domain 19 237 1.3E-16 T 15-10-2018 IPR025857 MacB-like periplasmic core domain Trad_1565 71459c6081df85205bbfdd5dc4779bbc 864 Pfam PF12704 MacB-like periplasmic core domain 485 705 2.2E-8 T 15-10-2018 IPR025857 MacB-like periplasmic core domain Trad_0224 be6b1b15080b0cb9cd0e02f4383523af 390 Pfam PF00512 His Kinase A (phospho-acceptor) domain 144 208 1.6E-10 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Trad_0224 be6b1b15080b0cb9cd0e02f4383523af 390 SUPERFAMILY SSF55874 199 370 1.44E-35 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Trad_0224 be6b1b15080b0cb9cd0e02f4383523af 390 SMART SM00387 255 372 7.6E-30 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Trad_0224 be6b1b15080b0cb9cd0e02f4383523af 390 SUPERFAMILY SSF47384 134 208 3.34E-13 T 15-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Trad_0224 be6b1b15080b0cb9cd0e02f4383523af 390 Gene3D G3DSA:1.10.287.130 133 210 9.5E-13 T 15-10-2018 Trad_0224 be6b1b15080b0cb9cd0e02f4383523af 390 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 259 370 1.1E-18 T 15-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Trad_0224 be6b1b15080b0cb9cd0e02f4383523af 390 SMART SM00388 143 209 1.1E-11 T 15-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Trad_0224 be6b1b15080b0cb9cd0e02f4383523af 390 PRINTS PR00344 Bacterial sensor protein C-terminal signature 311 321 9.8E-15 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Trad_0224 be6b1b15080b0cb9cd0e02f4383523af 390 PRINTS PR00344 Bacterial sensor protein C-terminal signature 356 369 9.8E-15 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Trad_0224 be6b1b15080b0cb9cd0e02f4383523af 390 PRINTS PR00344 Bacterial sensor protein C-terminal signature 293 307 9.8E-15 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Trad_0224 be6b1b15080b0cb9cd0e02f4383523af 390 PRINTS PR00344 Bacterial sensor protein C-terminal signature 328 346 9.8E-15 T 15-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Trad_0224 be6b1b15080b0cb9cd0e02f4383523af 390 Gene3D G3DSA:3.30.565.10 215 371 1.4E-33 T 15-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Trad_1392 f617c8f681fe2d1f977c6da141fcafec 301 Gene3D G3DSA:3.30.470.80 187 294 3.7E-38 T 15-10-2018 Trad_1392 f617c8f681fe2d1f977c6da141fcafec 301 SUPERFAMILY SSF52440 16 102 3.74E-19 T 15-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Trad_1392 f617c8f681fe2d1f977c6da141fcafec 301 Gene3D G3DSA:3.40.50.20 12 117 6.2E-31 T 15-10-2018 Trad_1392 f617c8f681fe2d1f977c6da141fcafec 301 Gene3D G3DSA:3.30.1490.20 118 186 1.4E-32 T 15-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Trad_1392 f617c8f681fe2d1f977c6da141fcafec 301 TIGRFAM TIGR02144 LysX_arch: lysine biosynthesis enzyme LysX 17 292 3.2E-112 T 15-10-2018 IPR011870 Lysine biosynthesis enzyme LysX GO:0003824|GO:0005524|GO:0009085 Trad_1392 f617c8f681fe2d1f977c6da141fcafec 301 Pfam PF08443 RimK-like ATP-grasp domain 102 287 2.9E-30 T 15-10-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 Trad_1392 f617c8f681fe2d1f977c6da141fcafec 301 SUPERFAMILY SSF56059 101 291 2.86E-44 T 15-10-2018 Trad_1392 f617c8f681fe2d1f977c6da141fcafec 301 TIGRFAM TIGR00768 rimK_fam: alpha-L-glutamate ligase, RimK family 17 288 1.8E-98 T 15-10-2018 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX GO:0006464 Reactome: R-HSA-70614 Trad_0494 fa482bad3fa703a722c195ea53319677 430 PRINTS PR00945 Mercuric reductase class II signature 222 240 9.7E-7 T 15-10-2018 Trad_0494 fa482bad3fa703a722c195ea53319677 430 PRINTS PR00945 Mercuric reductase class II signature 336 353 9.7E-7 T 15-10-2018 Trad_0494 fa482bad3fa703a722c195ea53319677 430 SUPERFAMILY SSF51905 16 403 2.36E-15 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Trad_0494 fa482bad3fa703a722c195ea53319677 430 Gene3D G3DSA:3.50.50.60 95 377 4.2E-17 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Trad_0494 fa482bad3fa703a722c195ea53319677 430 Pfam PF13434 L-lysine 6-monooxygenase (NADPH-requiring) 113 281 5.8E-5 T 15-10-2018 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase Trad_2869 a87802eb8130b1fde89259339486bcee 346 SUPERFAMILY SSF51735 8 333 7.49E-92 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_2869 a87802eb8130b1fde89259339486bcee 346 Gene3D G3DSA:3.40.50.720 9 315 1.9E-113 T 15-10-2018 Trad_2869 a87802eb8130b1fde89259339486bcee 346 Pfam PF16363 GDP-mannose 4,6 dehydratase 11 316 7.3E-80 T 15-10-2018 IPR016040 NAD(P)-binding domain Trad_2869 a87802eb8130b1fde89259339486bcee 346 Gene3D G3DSA:3.90.25.10 202 323 1.9E-113 T 15-10-2018 Trad_2869 a87802eb8130b1fde89259339486bcee 346 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 9 330 3.5E-128 T 15-10-2018 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|KEGG: 00525+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 Trad_0553 623bdd9bf90af13614207279b41e82f7 310 SMART SM00382 45 195 0.004 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_0553 623bdd9bf90af13614207279b41e82f7 310 SUPERFAMILY SSF52540 4 278 1.82E-75 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_0553 623bdd9bf90af13614207279b41e82f7 310 Pfam PF03308 ArgK protein 18 282 3.3E-101 T 15-10-2018 Trad_0553 623bdd9bf90af13614207279b41e82f7 310 Gene3D G3DSA:3.40.50.300 40 251 6.5E-85 T 15-10-2018 Trad_0553 623bdd9bf90af13614207279b41e82f7 310 TIGRFAM TIGR00750 lao: LAO/AO transport system ATPase 14 296 8.0E-102 T 15-10-2018 IPR005129 SIMIBI class G3E GTPase, ArgK/MeaB GO:0003924|GO:0005525 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 Trad_1429 5a5b36855efeedf98f5919880890c09e 97 SUPERFAMILY SSF143880 6 80 8.5E-19 T 15-10-2018 IPR036782 NE0471-like, N-terminal Trad_1429 5a5b36855efeedf98f5919880890c09e 97 Pfam PF10387 Protein of unknown function (DUF2442) 8 77 2.4E-17 T 15-10-2018 IPR018841 Protein of unknown function DUF2442 Trad_1429 5a5b36855efeedf98f5919880890c09e 97 Gene3D G3DSA:3.30.2020.10 3 79 2.9E-9 T 15-10-2018 IPR036782 NE0471-like, N-terminal Trad_0126 20df61f0de5610979316ce0a3c9af665 330 Gene3D G3DSA:3.40.190.150 34 321 4.2E-62 T 15-10-2018 Trad_0126 20df61f0de5610979316ce0a3c9af665 330 Gene3D G3DSA:3.40.190.10 128 256 4.2E-62 T 15-10-2018 Trad_0126 20df61f0de5610979316ce0a3c9af665 330 SUPERFAMILY SSF53850 72 279 6.24E-7 T 15-10-2018 Trad_0126 20df61f0de5610979316ce0a3c9af665 330 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 69 327 5.5E-25 T 15-10-2018 IPR005064 Bordetella uptake gene GO:0030288 Trad_0126 20df61f0de5610979316ce0a3c9af665 330 PIRSF PIRSF017082 5 330 1.3E-81 T 15-10-2018 IPR005064 Bordetella uptake gene GO:0030288 Trad_0209 58c4e61c9b001a8de62effca4bb44c82 1517 Gene3D G3DSA:2.160.20.60 1219 1494 9.3E-105 T 15-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 Trad_0209 58c4e61c9b001a8de62effca4bb44c82 1517 SUPERFAMILY SSF51395 450 1216 3.66E-241 T 15-10-2018 Trad_0209 58c4e61c9b001a8de62effca4bb44c82 1517 Pfam PF04898 Glutamate synthase central domain 465 743 4.8E-103 T 15-10-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 Trad_0209 58c4e61c9b001a8de62effca4bb44c82 1517 Pfam PF01645 Conserved region in glutamate synthase 801 1182 4.5E-151 T 15-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 Trad_0209 58c4e61c9b001a8de62effca4bb44c82 1517 SUPERFAMILY SSF69336 1240 1492 4.84E-88 T 15-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 Trad_0209 58c4e61c9b001a8de62effca4bb44c82 1517 Pfam PF01493 GXGXG motif 1263 1444 1.6E-76 T 15-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 Trad_0209 58c4e61c9b001a8de62effca4bb44c82 1517 Pfam PF00310 Glutamine amidotransferases class-II 20 436 5.3E-164 T 15-10-2018 IPR017932 Glutamine amidotransferase type 2 domain Trad_0209 58c4e61c9b001a8de62effca4bb44c82 1517 Gene3D G3DSA:3.60.20.10 20 552 0.0 T 15-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Trad_0209 58c4e61c9b001a8de62effca4bb44c82 1517 Gene3D G3DSA:3.20.20.70 490 1198 0.0 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Trad_0209 58c4e61c9b001a8de62effca4bb44c82 1517 SUPERFAMILY SSF56235 20 438 6.95E-140 T 15-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Trad_0209 58c4e61c9b001a8de62effca4bb44c82 1517 Gene3D G3DSA:3.20.20.70 441 799 0.0 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Trad_1857 9c4495bc79eb4f5dc2d825de69a4dfbd 264 Gene3D G3DSA:3.90.550.10 17 250 4.8E-58 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Trad_1857 9c4495bc79eb4f5dc2d825de69a4dfbd 264 SUPERFAMILY SSF53448 17 249 4.93E-30 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Trad_1857 9c4495bc79eb4f5dc2d825de69a4dfbd 264 Pfam PF12804 MobA-like NTP transferase domain 20 165 4.3E-14 T 15-10-2018 IPR025877 MobA-like NTP transferase Trad_1219 ad33d042023907fa865e1a5a36b80a6d 384 Pfam PF09949 Uncharacterized conserved protein (DUF2183) 223 320 1.3E-33 T 15-10-2018 IPR019236 Domain of unknown function DUF2183 Trad_0536 19e037ed9f31396c83f2fc9b08343702 329 SUPERFAMILY SSF50129 4 146 1.19E-40 T 15-10-2018 IPR011032 GroES-like superfamily Trad_0536 19e037ed9f31396c83f2fc9b08343702 329 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 5 327 1.5E-131 T 15-10-2018 IPR014188 Acrylyl-CoA reductase AcuI Trad_0536 19e037ed9f31396c83f2fc9b08343702 329 Gene3D G3DSA:3.90.180.10 20 326 1.8E-118 T 15-10-2018 Trad_0536 19e037ed9f31396c83f2fc9b08343702 329 Pfam PF00107 Zinc-binding dehydrogenase 161 271 1.4E-13 T 15-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Trad_0536 19e037ed9f31396c83f2fc9b08343702 329 Gene3D G3DSA:3.40.50.720 128 295 1.8E-118 T 15-10-2018 Trad_0536 19e037ed9f31396c83f2fc9b08343702 329 SUPERFAMILY SSF51735 119 287 2.04E-35 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_0536 19e037ed9f31396c83f2fc9b08343702 329 SMART SM00829 13 325 1.0E-6 T 15-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Trad_1724 7ff5aac6be34bf66d0651f47a3b047b4 126 Gene3D G3DSA:3.30.1330.40 5 126 6.5E-47 T 15-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Trad_1724 7ff5aac6be34bf66d0651f47a3b047b4 126 PIRSF PIRSF005965 4 126 8.4E-44 T 15-10-2018 IPR008243 Chorismate mutase, AroH class KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 Trad_1724 7ff5aac6be34bf66d0651f47a3b047b4 126 TIGRFAM TIGR01796 CM_mono_aroH: chorismate mutase 6 122 1.8E-40 T 15-10-2018 IPR008243 Chorismate mutase, AroH class KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 Trad_1724 7ff5aac6be34bf66d0651f47a3b047b4 126 Pfam PF07736 Chorismate mutase type I 6 122 2.7E-43 T 15-10-2018 IPR008243 Chorismate mutase, AroH class KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 Trad_1724 7ff5aac6be34bf66d0651f47a3b047b4 126 ProDom PD031888 MUTASE CHORISMATE AROH THE CLASS ISOMERASE TRANSCRIPTION BIOSYNTHESIS CM 3D-STRUCTURE 12 125 5.0E-29 T 15-10-2018 IPR008243 Chorismate mutase, AroH class KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 Trad_1724 7ff5aac6be34bf66d0651f47a3b047b4 126 SUPERFAMILY SSF55298 6 123 9.42E-43 T 15-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Trad_0906 54a73c617b8c407fb37c675084d9710c 380 SUPERFAMILY SSF50952 45 373 2.48E-48 T 15-10-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 Trad_0906 54a73c617b8c407fb37c675084d9710c 380 Gene3D G3DSA:2.120.10.30 39 376 7.3E-119 T 15-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like Trad_0906 54a73c617b8c407fb37c675084d9710c 380 Pfam PF07995 Glucose / Sorbosone dehydrogenase 48 372 2.0E-136 T 15-10-2018 IPR012938 Glucose/Sorbosone dehydrogenase Trad_2570 82af1e5b5b822c1b6ef258ef4b85dc14 160 Pfam PF02627 Carboxymuconolactone decarboxylase family 32 104 8.8E-5 T 15-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 Trad_2570 82af1e5b5b822c1b6ef258ef4b85dc14 160 SUPERFAMILY SSF69118 13 158 2.88E-27 T 15-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 Trad_2570 82af1e5b5b822c1b6ef258ef4b85dc14 160 Gene3D G3DSA:1.20.1290.10 2 160 4.1E-27 T 15-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 Trad_0968 bc150925b38791cafe8590022e7bdf6b 1273 Pfam PF00128 Alpha amylase, catalytic domain 339 701 5.3E-12 T 15-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Trad_0968 bc150925b38791cafe8590022e7bdf6b 1273 SUPERFAMILY SSF51445 330 702 3.39E-56 T 15-10-2018 IPR017853 Glycoside hydrolase superfamily Trad_0968 bc150925b38791cafe8590022e7bdf6b 1273 SMART SM00642 320 714 7.7E-4 T 15-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Trad_0968 bc150925b38791cafe8590022e7bdf6b 1273 Gene3D G3DSA:3.20.20.80 569 735 3.5E-11 T 15-10-2018 Trad_1911 8f7bcba75d729f32f92a84fd4e2f9bee 256 Pfam PF00005 ABC transporter 18 174 1.3E-32 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Trad_1911 8f7bcba75d729f32f92a84fd4e2f9bee 256 SUPERFAMILY SSF52540 1 237 1.61E-62 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_1911 8f7bcba75d729f32f92a84fd4e2f9bee 256 SMART SM00382 27 231 1.2E-11 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_1911 8f7bcba75d729f32f92a84fd4e2f9bee 256 TIGRFAM TIGR02315 ABC_phnC: phosphonate ABC transporter, ATP-binding protein 1 243 2.8E-100 T 15-10-2018 IPR012693 ABC transporter, phosphonate import, PhnC GO:0005524|GO:0015416|GO:0015716|GO:0016020 Trad_1911 8f7bcba75d729f32f92a84fd4e2f9bee 256 Gene3D G3DSA:3.40.50.300 1 252 6.1E-64 T 15-10-2018 Trad_1911 8f7bcba75d729f32f92a84fd4e2f9bee 256 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Trad_1411 7bc78eee7b08227a9b142cf1aa0cd342 321 PRINTS PR00116 Arginase signature 122 137 2.0E-14 T 15-10-2018 IPR006035 Ureohydrolase GO:0046872 Trad_1411 7bc78eee7b08227a9b142cf1aa0cd342 321 PRINTS PR00116 Arginase signature 235 264 2.0E-14 T 15-10-2018 IPR006035 Ureohydrolase GO:0046872 Trad_1411 7bc78eee7b08227a9b142cf1aa0cd342 321 SUPERFAMILY SSF52768 13 309 3.6E-98 T 15-10-2018 IPR023696 Ureohydrolase domain superfamily Trad_1411 7bc78eee7b08227a9b142cf1aa0cd342 321 ProSitePatterns PS01053 Arginase family signature. 238 259 - T 15-10-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 Trad_1411 7bc78eee7b08227a9b142cf1aa0cd342 321 PIRSF PIRSF036979 13 313 1.9E-93 T 15-10-2018 IPR006035 Ureohydrolase GO:0046872 Trad_1411 7bc78eee7b08227a9b142cf1aa0cd342 321 TIGRFAM TIGR01230 agmatinase: agmatinase 36 308 6.1E-60 T 15-10-2018 IPR005925 Agmatinase-related KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305|Reactome: R-HSA-351143 Trad_1411 7bc78eee7b08227a9b142cf1aa0cd342 321 Gene3D G3DSA:3.40.800.10 3 313 3.4E-111 T 15-10-2018 Trad_1411 7bc78eee7b08227a9b142cf1aa0cd342 321 Pfam PF00491 Arginase family 36 307 1.4E-85 T 15-10-2018 IPR006035 Ureohydrolase GO:0046872 Trad_2397 276c58f4ca2c5180ca7fc4857d03e0dc 306 Pfam PF01545 Cation efflux family 9 202 7.3E-38 T 15-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 Trad_2397 276c58f4ca2c5180ca7fc4857d03e0dc 306 SUPERFAMILY SSF160240 206 282 3.27E-19 T 15-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 Trad_2397 276c58f4ca2c5180ca7fc4857d03e0dc 306 SUPERFAMILY SSF161111 5 203 6.15E-52 T 15-10-2018 IPR027469 Cation efflux transmembrane domain superfamily Trad_2397 276c58f4ca2c5180ca7fc4857d03e0dc 306 Gene3D G3DSA:3.30.70.1350 203 284 9.9E-23 T 15-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 Trad_2397 276c58f4ca2c5180ca7fc4857d03e0dc 306 Gene3D G3DSA:1.20.1510.10 5 202 7.7E-53 T 15-10-2018 IPR027469 Cation efflux transmembrane domain superfamily Trad_2397 276c58f4ca2c5180ca7fc4857d03e0dc 306 Pfam PF16916 Dimerisation domain of Zinc Transporter 206 282 6.9E-21 T 15-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain Trad_2397 276c58f4ca2c5180ca7fc4857d03e0dc 306 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 5 282 1.3E-68 T 15-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 Trad_2415 d820d7a90358310171d9c2d9512198dc 167 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 2.0E-9 T 15-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Trad_2415 d820d7a90358310171d9c2d9512198dc 167 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 2.0E-9 T 15-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Trad_2415 d820d7a90358310171d9c2d9512198dc 167 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 30 2.0E-9 T 15-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Trad_2415 d820d7a90358310171d9c2d9512198dc 167 Pfam PF01037 Lrp/AsnC ligand binding domain 69 135 3.0E-7 T 15-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain Trad_2415 d820d7a90358310171d9c2d9512198dc 167 Pfam PF13404 AsnC-type helix-turn-helix domain 3 43 1.7E-13 T 15-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Trad_2415 d820d7a90358310171d9c2d9512198dc 167 Gene3D G3DSA:1.10.10.10 1 53 1.2E-16 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Trad_2415 d820d7a90358310171d9c2d9512198dc 167 SUPERFAMILY SSF54909 62 145 2.28E-11 T 15-10-2018 IPR011008 Dimeric alpha-beta barrel Trad_2415 d820d7a90358310171d9c2d9512198dc 167 Gene3D G3DSA:3.30.70.920 56 146 1.2E-13 T 15-10-2018 Trad_2415 d820d7a90358310171d9c2d9512198dc 167 SUPERFAMILY SSF46785 2 50 3.86E-10 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Trad_2415 d820d7a90358310171d9c2d9512198dc 167 SMART SM00344 3 108 2.1E-26 T 15-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 Trad_1478 c63e8e5043cafac08b8c86b18652a3a1 437 Gene3D G3DSA:3.90.1300.10 2 434 2.5E-125 T 15-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Trad_1478 c63e8e5043cafac08b8c86b18652a3a1 437 SUPERFAMILY SSF75304 4 436 1.27E-122 T 15-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Trad_1478 c63e8e5043cafac08b8c86b18652a3a1 437 Pfam PF01425 Amidase 315 416 2.1E-12 T 15-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Trad_1478 c63e8e5043cafac08b8c86b18652a3a1 437 Pfam PF01425 Amidase 28 305 4.8E-84 T 15-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Trad_1537 2f8a09198925756707a55fa6937ad006 138 Pfam PF05610 Protein of unknown function (DUF779) 25 118 7.4E-49 T 15-10-2018 IPR008497 Protein of unknown function DUF779 Trad_1537 2f8a09198925756707a55fa6937ad006 138 PIRSF PIRSF009151 2 132 1.6E-59 T 15-10-2018 IPR008497 Protein of unknown function DUF779 Trad_1812 5a5c513d575f0076fc104b7925618f97 224 SUPERFAMILY SSF82171 53 211 3.37E-13 T 15-10-2018 Trad_1812 5a5c513d575f0076fc104b7925618f97 224 Gene3D G3DSA:2.130.10.10 39 216 2.8E-12 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Trad_1291 e4109672ec17e75c784b1402df3a9bc6 236 SUPERFAMILY SSF52540 19 234 1.14E-55 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_1291 e4109672ec17e75c784b1402df3a9bc6 236 Pfam PF00005 ABC transporter 38 183 7.4E-27 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Trad_1291 e4109672ec17e75c784b1402df3a9bc6 236 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Trad_1291 e4109672ec17e75c784b1402df3a9bc6 236 Gene3D G3DSA:3.40.50.300 16 235 1.8E-59 T 15-10-2018 Trad_1291 e4109672ec17e75c784b1402df3a9bc6 236 SMART SM00382 47 232 1.2E-15 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_2698 0f6520096add4538b00c657fbad827d9 260 SUPERFAMILY SSF53335 29 256 1.41E-31 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Trad_2698 0f6520096add4538b00c657fbad827d9 260 Gene3D G3DSA:3.40.50.150 29 242 2.0E-28 T 15-10-2018 Trad_2698 0f6520096add4538b00c657fbad827d9 260 Pfam PF13649 Methyltransferase domain 50 136 6.7E-13 T 15-10-2018 Trad_2988 a3a3b9112124d3404455a1cc85c5b715 115 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 18 114 1.4E-31 T 15-10-2018 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Trad_2988 a3a3b9112124d3404455a1cc85c5b715 115 Gene3D G3DSA:1.20.58.1610 1 115 5.9E-36 T 15-10-2018 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Trad_1364 45cf814e87c568d89af71cef5710d5eb 410 SUPERFAMILY SSF53067 84 383 1.24E-44 T 15-10-2018 Trad_1364 45cf814e87c568d89af71cef5710d5eb 410 Gene3D G3DSA:1.10.10.10 12 77 8.0E-19 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Trad_1364 45cf814e87c568d89af71cef5710d5eb 410 Gene3D G3DSA:3.30.420.40 197 381 1.6E-39 T 15-10-2018 Trad_1364 45cf814e87c568d89af71cef5710d5eb 410 SUPERFAMILY SSF46785 13 73 1.77E-14 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Trad_1364 45cf814e87c568d89af71cef5710d5eb 410 Gene3D G3DSA:3.30.420.40 78 196 1.1E-11 T 15-10-2018 Trad_1364 45cf814e87c568d89af71cef5710d5eb 410 Pfam PF00480 ROK family 85 379 8.4E-28 T 15-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 Trad_0198 d2ba20b8b4f7366e2099b9ccc926bf44 260 Gene3D G3DSA:1.25.40.10 8 182 4.3E-10 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Trad_0198 d2ba20b8b4f7366e2099b9ccc926bf44 260 SUPERFAMILY SSF48452 30 142 2.37E-6 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Trad_1110 7751f7ff9f774d9b279d55a5c7ab7354 337 SUPERFAMILY SSF52151 48 329 3.14E-50 T 15-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Trad_1110 7751f7ff9f774d9b279d55a5c7ab7354 337 Gene3D G3DSA:3.40.1090.10 145 222 9.5E-16 T 15-10-2018 Trad_1110 7751f7ff9f774d9b279d55a5c7ab7354 337 Gene3D G3DSA:3.40.1090.10 35 144 5.0E-25 T 15-10-2018 Trad_1110 7751f7ff9f774d9b279d55a5c7ab7354 337 Pfam PF01734 Patatin-like phospholipase 52 208 2.6E-27 T 15-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 Trad_1890 abd64c82726d882480b1b07b7184b157 504 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 268 275 - T 15-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 Trad_1890 abd64c82726d882480b1b07b7184b157 504 Gene3D G3DSA:3.40.309.10 272 463 9.2E-178 T 15-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Trad_1890 abd64c82726d882480b1b07b7184b157 504 Gene3D G3DSA:3.40.605.10 39 488 9.2E-178 T 15-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Trad_1890 abd64c82726d882480b1b07b7184b157 504 SUPERFAMILY SSF53720 22 494 2.23E-164 T 15-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Trad_1890 abd64c82726d882480b1b07b7184b157 504 Pfam PF00171 Aldehyde dehydrogenase family 34 490 4.9E-172 T 15-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Trad_1890 abd64c82726d882480b1b07b7184b157 504 TIGRFAM TIGR02299 HpaE: 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase 27 504 2.1E-237 T 15-10-2018 IPR011985 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase GO:0018480|GO:1901023 Trad_2434 1f8f835d067a0fd2bf62a4cdc3c62abc 721 Gene3D G3DSA:3.40.50.1000 8 209 7.0E-14 T 15-10-2018 IPR023214 HAD superfamily Trad_2434 1f8f835d067a0fd2bf62a4cdc3c62abc 721 SUPERFAMILY SSF56784 63 213 1.52E-14 T 15-10-2018 IPR036412 HAD-like superfamily Trad_2434 1f8f835d067a0fd2bf62a4cdc3c62abc 721 Gene3D G3DSA:1.10.150.400 23 104 7.0E-14 T 15-10-2018 Trad_2434 1f8f835d067a0fd2bf62a4cdc3c62abc 721 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 123 204 1.6E-5 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Trad_2974 ad4199503ca1f5afbf915c8cd76f2e9e 487 Pfam PF00361 Proton-conducting membrane transporter 125 421 4.7E-68 T 15-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Trad_2974 ad4199503ca1f5afbf915c8cd76f2e9e 487 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 7 474 2.3E-129 T 15-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 Trad_2974 ad4199503ca1f5afbf915c8cd76f2e9e 487 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 4 474 17.802 T 15-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 Trad_0308 24f725d706eb390fc932ecd3e60a8c2d 417 Gene3D G3DSA:3.40.50.2000 212 391 3.0E-63 T 15-10-2018 Trad_0308 24f725d706eb390fc932ecd3e60a8c2d 417 Pfam PF13579 Glycosyl transferase 4-like domain 28 208 2.1E-19 T 15-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Trad_0308 24f725d706eb390fc932ecd3e60a8c2d 417 SUPERFAMILY SSF53756 25 412 8.3E-70 T 15-10-2018 Trad_0308 24f725d706eb390fc932ecd3e60a8c2d 417 Gene3D G3DSA:3.40.50.2000 25 408 3.0E-63 T 15-10-2018 Trad_0308 24f725d706eb390fc932ecd3e60a8c2d 417 Pfam PF00534 Glycosyl transferases group 1 225 390 5.4E-31 T 15-10-2018 IPR001296 Glycosyl transferase, family 1 Trad_1286 7fdd77761ffada918f028c7a3b1544a6 128 ProSitePatterns PS00360 Ribosomal protein S9 signature. 67 85 - T 15-10-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 Trad_1286 7fdd77761ffada918f028c7a3b1544a6 128 Gene3D G3DSA:3.30.230.10 1 128 6.0E-50 T 15-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Trad_1286 7fdd77761ffada918f028c7a3b1544a6 128 SUPERFAMILY SSF54211 3 128 1.21E-44 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Trad_1286 7fdd77761ffada918f028c7a3b1544a6 128 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 128 32.102 T 15-10-2018 IPR023035 Ribosomal protein S9, bacterial/plastid Trad_1286 7fdd77761ffada918f028c7a3b1544a6 128 Pfam PF00380 Ribosomal protein S9/S16 8 128 6.7E-42 T 15-10-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 Trad_0237 9817cf98a0c0d08ffbccca8873ed31b3 695 Gene3D G3DSA:3.30.1840.10 6 318 1.1E-110 T 15-10-2018 IPR036830 Polyphosphate kinase middle domain superfamily KEGG: 00190+2.7.4.1 Trad_0237 9817cf98a0c0d08ffbccca8873ed31b3 695 Pfam PF13090 Polyphosphate kinase C-terminal domain 335 682 4.5E-158 T 15-10-2018 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 Trad_0237 9817cf98a0c0d08ffbccca8873ed31b3 695 Pfam PF02503 Polyphosphate kinase middle domain 127 325 4.6E-67 T 15-10-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 Trad_0237 9817cf98a0c0d08ffbccca8873ed31b3 695 Pfam PF13089 Polyphosphate kinase N-terminal domain 12 117 1.7E-39 T 15-10-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 Trad_0237 9817cf98a0c0d08ffbccca8873ed31b3 695 Gene3D G3DSA:3.30.870.10 323 504 1.9E-71 T 15-10-2018 Trad_0237 9817cf98a0c0d08ffbccca8873ed31b3 695 SUPERFAMILY SSF140356 8 113 3.92E-38 T 15-10-2018 IPR036832 Polyphosphate kinase N-terminal domain superfamily KEGG: 00190+2.7.4.1 Trad_0237 9817cf98a0c0d08ffbccca8873ed31b3 695 SUPERFAMILY SSF56024 320 500 6.28E-56 T 15-10-2018 Trad_0237 9817cf98a0c0d08ffbccca8873ed31b3 695 SUPERFAMILY SSF56024 505 684 5.61E-73 T 15-10-2018 Trad_0237 9817cf98a0c0d08ffbccca8873ed31b3 695 Gene3D G3DSA:3.30.870.10 505 690 1.2E-71 T 15-10-2018 Trad_0237 9817cf98a0c0d08ffbccca8873ed31b3 695 Hamap MF_00347 Polyphosphate kinase [ppk]. 9 687 29.728 T 15-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 Trad_0237 9817cf98a0c0d08ffbccca8873ed31b3 695 PIRSF PIRSF015589 1 692 1.0E-289 T 15-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 Trad_0237 9817cf98a0c0d08ffbccca8873ed31b3 695 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 12 682 2.0E-274 T 15-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 Trad_0237 9817cf98a0c0d08ffbccca8873ed31b3 695 SUPERFAMILY SSF143724 117 318 2.94E-64 T 15-10-2018 Trad_0034 ae7ca6e75298355114d72def6b9ce78f 107 Gene3D G3DSA:3.30.300.130 1 103 3.6E-36 T 15-10-2018 IPR034904 Fe-S cluster assembly domain superfamily Trad_0034 ae7ca6e75298355114d72def6b9ce78f 107 Pfam PF01883 Iron-sulfur cluster assembly protein 7 80 1.3E-21 T 15-10-2018 IPR002744 MIP18 family-like Trad_0034 ae7ca6e75298355114d72def6b9ce78f 107 SUPERFAMILY SSF117916 5 101 2.29E-31 T 15-10-2018 IPR034904 Fe-S cluster assembly domain superfamily Trad_0495 5b208f9cb7381a2de2f6da56d0da9f13 89 Gene3D G3DSA:4.10.830.10 28 89 2.6E-24 T 15-10-2018 Trad_0495 5b208f9cb7381a2de2f6da56d0da9f13 89 Pfam PF00253 Ribosomal protein S14p/S29e 37 88 7.9E-25 T 15-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Trad_0495 5b208f9cb7381a2de2f6da56d0da9f13 89 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 89 24.286 T 15-10-2018 IPR023036 Ribosomal protein S14, bacterial/plastid Trad_0495 5b208f9cb7381a2de2f6da56d0da9f13 89 SUPERFAMILY SSF57716 2 89 1.28E-29 T 15-10-2018 Trad_0495 5b208f9cb7381a2de2f6da56d0da9f13 89 ProSitePatterns PS00527 Ribosomal protein S14 signature. 51 73 - T 15-10-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Trad_0115 c97d25476e9c9f8d86e3b4562345dbf8 319 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 107 281 3.4E-55 T 15-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 Trad_0115 c97d25476e9c9f8d86e3b4562345dbf8 319 Gene3D G3DSA:3.40.50.720 23 319 2.1E-102 T 15-10-2018 Trad_0115 c97d25476e9c9f8d86e3b4562345dbf8 319 SUPERFAMILY SSF51735 101 281 4.54E-54 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_0115 c97d25476e9c9f8d86e3b4562345dbf8 319 SUPERFAMILY SSF52283 33 122 2.04E-9 T 15-10-2018 Trad_0115 c97d25476e9c9f8d86e3b4562345dbf8 319 Gene3D G3DSA:3.40.50.720 98 287 2.1E-102 T 15-10-2018 Trad_2012 de305d2e5f0d4a12bc105daa70d39738 264 SMART SM00382 50 237 1.3E-18 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_2012 de305d2e5f0d4a12bc105daa70d39738 264 PIRSF PIRSF039085 22 264 5.7E-117 T 15-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 Trad_2012 de305d2e5f0d4a12bc105daa70d39738 264 SUPERFAMILY SSF52540 25 259 7.73E-85 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_2012 de305d2e5f0d4a12bc105daa70d39738 264 ProSitePatterns PS00211 ABC transporters family signature. 161 175 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Trad_2012 de305d2e5f0d4a12bc105daa70d39738 264 Gene3D G3DSA:3.40.50.300 23 264 1.4E-83 T 15-10-2018 Trad_2012 de305d2e5f0d4a12bc105daa70d39738 264 Pfam PF00005 ABC transporter 41 189 2.3E-40 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Trad_2976 20f20713d3f3210318353fa76916f6fb 647 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 24 640 4.6E-206 T 15-10-2018 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Trad_2976 20f20713d3f3210318353fa76916f6fb 647 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 79 136 5.0E-23 T 15-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Trad_2976 20f20713d3f3210318353fa76916f6fb 647 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 172 193 8.0E-61 T 15-10-2018 Trad_2976 20f20713d3f3210318353fa76916f6fb 647 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 329 341 8.0E-61 T 15-10-2018 Trad_2976 20f20713d3f3210318353fa76916f6fb 647 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 125 145 8.0E-61 T 15-10-2018 Trad_2976 20f20713d3f3210318353fa76916f6fb 647 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 97 122 8.0E-61 T 15-10-2018 Trad_2976 20f20713d3f3210318353fa76916f6fb 647 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 437 456 8.0E-61 T 15-10-2018 Trad_2976 20f20713d3f3210318353fa76916f6fb 647 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 239 260 8.0E-61 T 15-10-2018 Trad_2976 20f20713d3f3210318353fa76916f6fb 647 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 261 287 8.0E-61 T 15-10-2018 Trad_2976 20f20713d3f3210318353fa76916f6fb 647 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 73 97 1.6E-15 T 15-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 Trad_2976 20f20713d3f3210318353fa76916f6fb 647 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 436 458 1.6E-15 T 15-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 Trad_2976 20f20713d3f3210318353fa76916f6fb 647 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 279 301 1.6E-15 T 15-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 Trad_2976 20f20713d3f3210318353fa76916f6fb 647 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 99 119 1.6E-15 T 15-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 Trad_2976 20f20713d3f3210318353fa76916f6fb 647 Pfam PF00361 Proton-conducting membrane transporter 148 427 2.5E-82 T 15-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Trad_0471 b7d4b8ecc6ba648cb657c60b8fc7b8cf 175 SUPERFAMILY SSF51658 7 129 2.95E-6 T 15-10-2018 IPR036237 Xylose isomerase-like superfamily Trad_0471 b7d4b8ecc6ba648cb657c60b8fc7b8cf 175 Gene3D G3DSA:3.20.20.150 4 130 2.5E-9 T 15-10-2018 Trad_2129 890d9938334387d81cd9a4fafd210afd 278 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 62 192 2.1E-45 T 15-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Trad_2129 890d9938334387d81cd9a4fafd210afd 278 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 94 111 - T 15-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 Trad_2129 890d9938334387d81cd9a4fafd210afd 278 SUPERFAMILY SSF50891 60 192 8.91E-55 T 15-10-2018 IPR029000 Cyclophilin-like domain superfamily Trad_2129 890d9938334387d81cd9a4fafd210afd 278 Gene3D G3DSA:2.40.100.10 46 198 3.2E-58 T 15-10-2018 IPR029000 Cyclophilin-like domain superfamily Trad_2129 890d9938334387d81cd9a4fafd210afd 278 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 139 154 2.2E-31 T 15-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Trad_2129 890d9938334387d81cd9a4fafd210afd 278 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 154 166 2.2E-31 T 15-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Trad_2129 890d9938334387d81cd9a4fafd210afd 278 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 73 88 2.2E-31 T 15-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Trad_2129 890d9938334387d81cd9a4fafd210afd 278 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 99 111 2.2E-31 T 15-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Trad_2129 890d9938334387d81cd9a4fafd210afd 278 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 167 182 2.2E-31 T 15-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Trad_2382 b7101da5f09f52084b69d37930a6350e 136 Gene3D G3DSA:3.30.420.270 63 131 1.4E-17 T 15-10-2018 Trad_2382 b7101da5f09f52084b69d37930a6350e 136 Pfam PF02472 Biopolymer transport protein ExbD/TolR 14 133 2.5E-31 T 15-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 Trad_0997 c0e5cc44681d4a7e9aa6edd5feee0072 481 Gene3D G3DSA:3.30.420.40 255 481 3.7E-68 T 15-10-2018 Trad_0997 c0e5cc44681d4a7e9aa6edd5feee0072 481 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 8 248 8.9E-65 T 15-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 Trad_0997 c0e5cc44681d4a7e9aa6edd5feee0072 481 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 260 440 1.2E-33 T 15-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 Trad_0997 c0e5cc44681d4a7e9aa6edd5feee0072 481 TIGRFAM TIGR01312 XylB: xylulokinase 9 477 1.3E-150 T 15-10-2018 IPR006000 Xylulokinase GO:0004856|GO:0005997 KEGG: 00040+2.7.1.17 Trad_0997 c0e5cc44681d4a7e9aa6edd5feee0072 481 SUPERFAMILY SSF53067 8 250 1.18E-73 T 15-10-2018 Trad_0997 c0e5cc44681d4a7e9aa6edd5feee0072 481 SUPERFAMILY SSF53067 259 478 1.01E-55 T 15-10-2018 Trad_0997 c0e5cc44681d4a7e9aa6edd5feee0072 481 Gene3D G3DSA:3.30.420.40 2 240 1.3E-86 T 15-10-2018 Trad_0997 c0e5cc44681d4a7e9aa6edd5feee0072 481 PIRSF PIRSF000538 5 480 9.8E-142 T 15-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 Trad_0997 c0e5cc44681d4a7e9aa6edd5feee0072 481 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 357 377 - T 15-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 Trad_2421 ef8d634d90a99599a55cd4ae21a2da1c 442 Pfam PF13520 Amino acid permease 23 401 8.4E-49 T 15-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Trad_2421 ef8d634d90a99599a55cd4ae21a2da1c 442 PIRSF PIRSF006060 4 439 1.7E-77 T 15-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Trad_2421 ef8d634d90a99599a55cd4ae21a2da1c 442 Gene3D G3DSA:1.20.1740.10 16 439 3.7E-102 T 15-10-2018 Trad_2714 0c3f1a7ebda038f23c719b70a05c1ee8 1065 Pfam PF04480 Protein of unknown function (DUF559) 175 282 6.1E-39 T 15-10-2018 IPR007569 Protein of unknown function DUF559 Trad_2714 0c3f1a7ebda038f23c719b70a05c1ee8 1065 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 654 660 - T 15-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Trad_2714 0c3f1a7ebda038f23c719b70a05c1ee8 1065 SUPERFAMILY SSF52980 177 284 1.88E-15 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 Trad_2714 0c3f1a7ebda038f23c719b70a05c1ee8 1065 SUPERFAMILY SSF53335 646 774 1.75E-12 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Trad_2714 0c3f1a7ebda038f23c719b70a05c1ee8 1065 Pfam PF06634 Protein of unknown function (DUF1156) 10 62 1.4E-24 T 15-10-2018 IPR009537 Domain of unknown function DUF1156 Trad_2714 0c3f1a7ebda038f23c719b70a05c1ee8 1065 Gene3D G3DSA:3.40.960.10 184 284 5.7E-33 T 15-10-2018 Trad_2714 0c3f1a7ebda038f23c719b70a05c1ee8 1065 SUPERFAMILY SSF53335 93 161 1.61E-8 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Trad_2177 b60faa801a88aae9a4f37387a0bd4ecd 53 PIRSF PIRSF037205 2 53 7.2E-25 T 15-10-2018 IPR017136 Uncharacterised conserved protein UCP037205 Trad_2177 b60faa801a88aae9a4f37387a0bd4ecd 53 Pfam PF10013 Uncharacterized protein conserved in bacteria (DUF2256) 6 45 2.8E-22 T 15-10-2018 IPR017136 Uncharacterised conserved protein UCP037205 Trad_0683 b70d58c4b93e355a2094a5cbe9dc490b 369 Pfam PF00953 Glycosyl transferase family 4 88 248 3.5E-37 T 15-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 Trad_0683 b70d58c4b93e355a2094a5cbe9dc490b 369 ProSitePatterns PS01348 MraY family signature 2. 167 178 - T 15-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Trad_1505 6647d06e8ed8be4e96ee8a2c6655d303 447 TIGRFAM TIGR03178 allantoinase: allantoinase 3 427 7.4E-150 T 15-10-2018 IPR017593 Allantoinase GO:0000256|GO:0004038|GO:0008270|GO:0050897 KEGG: 00230+3.5.2.5|MetaCyc: PWY-5697|MetaCyc: PWY-5698 Trad_1505 6647d06e8ed8be4e96ee8a2c6655d303 447 SUPERFAMILY SSF51556 52 369 4.66E-92 T 15-10-2018 IPR032466 Metal-dependent hydrolase Trad_1505 6647d06e8ed8be4e96ee8a2c6655d303 447 Hamap MF_01645 Allantoinase [allB]. 1 441 48.987 T 15-10-2018 IPR017593 Allantoinase GO:0000256|GO:0004038|GO:0008270|GO:0050897 KEGG: 00230+3.5.2.5|MetaCyc: PWY-5697|MetaCyc: PWY-5698 Trad_1505 6647d06e8ed8be4e96ee8a2c6655d303 447 Gene3D G3DSA:3.20.20.140 51 408 2.6E-137 T 15-10-2018 Trad_1505 6647d06e8ed8be4e96ee8a2c6655d303 447 Pfam PF01979 Amidohydrolase family 48 420 6.3E-24 T 15-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Trad_1505 6647d06e8ed8be4e96ee8a2c6655d303 447 ProSitePatterns PS00482 Dihydroorotase signature 1. 55 63 - T 15-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Trad_1505 6647d06e8ed8be4e96ee8a2c6655d303 447 Gene3D G3DSA:2.30.40.10 5 421 2.6E-137 T 15-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Trad_1505 6647d06e8ed8be4e96ee8a2c6655d303 447 SUPERFAMILY SSF51338 2 429 2.16E-24 T 15-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Trad_0909 9cef438ea76346b4b561fef8b9745bbd 282 Gene3D G3DSA:3.40.190.10 88 203 1.2E-72 T 15-10-2018 Trad_0909 9cef438ea76346b4b561fef8b9745bbd 282 Pfam PF02621 Menaquinone biosynthesis 19 269 6.8E-60 T 15-10-2018 IPR003773 Menaquinone biosynthesis enzyme Trad_0909 9cef438ea76346b4b561fef8b9745bbd 282 SUPERFAMILY SSF53850 19 268 1.6E-70 T 15-10-2018 Trad_0909 9cef438ea76346b4b561fef8b9745bbd 282 Hamap MF_00995 Chorismate dehydratase [mqnA]. 19 274 29.366 T 15-10-2018 IPR030868 Chorismate dehydratase GO:0009234|GO:0016829 KEGG: 00130+4.2.1.151|MetaCyc: PWY-7371|MetaCyc: PWY-7374 Trad_0909 9cef438ea76346b4b561fef8b9745bbd 282 Gene3D G3DSA:3.40.190.10 21 264 1.2E-72 T 15-10-2018 Trad_1989 4b0bdadf3ab56897ba544621fac9121b 384 Pfam PF12704 MacB-like periplasmic core domain 17 228 1.3E-24 T 15-10-2018 IPR025857 MacB-like periplasmic core domain Trad_1989 4b0bdadf3ab56897ba544621fac9121b 384 Pfam PF02687 FtsX-like permease family 285 375 4.7E-9 T 15-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Trad_2310 9a0f44fe18ae2683acc9c76cd089247d 512 Gene3D G3DSA:1.10.132.100 372 506 1.4E-41 T 15-10-2018 Trad_2310 9a0f44fe18ae2683acc9c76cd089247d 512 Pfam PF09481 CRISPR-associated protein Cse1 (CRISPR_cse1) 5 471 6.7E-139 T 15-10-2018 IPR013381 CRISPR-associated protein Cse1 Trad_2310 9a0f44fe18ae2683acc9c76cd089247d 512 TIGRFAM TIGR02547 casA_cse1: CRISPR type I-E/ECOLI-associated protein CasA/Cse1 5 505 2.8E-63 T 15-10-2018 IPR013381 CRISPR-associated protein Cse1 Trad_1016 4e4815b47e066b1cb2c04f75b4f13265 326 Gene3D G3DSA:3.40.50.300 2 324 2.3E-90 T 15-10-2018 Trad_1016 4e4815b47e066b1cb2c04f75b4f13265 326 Pfam PF02374 Anion-transporting ATPase 6 322 4.6E-70 T 15-10-2018 IPR025723 Anion-transporting ATPase-like domain Reactome: R-HSA-381038 Trad_1016 4e4815b47e066b1cb2c04f75b4f13265 326 SUPERFAMILY SSF52540 6 312 4.75E-47 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_1016 4e4815b47e066b1cb2c04f75b4f13265 326 SMART SM00382 4 237 1.5E-4 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_1016 4e4815b47e066b1cb2c04f75b4f13265 326 TIGRFAM TIGR00345 GET3_arsA_TRC40: transport-energizing ATPase, TRC40/GET3/ArsA family 9 322 1.0E-76 T 15-10-2018 IPR016300 Arsenical pump ATPase, ArsA/GET3 GO:0005524|GO:0016887 Reactome: R-HSA-381038 Trad_1329 45dbf7744d60de74f529c4cbdb19f3ea 391 ProSitePatterns PS00787 Chorismate synthase signature 1. 8 23 - T 15-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Trad_1329 45dbf7744d60de74f529c4cbdb19f3ea 391 Gene3D G3DSA:3.60.150.10 1 390 3.1E-136 T 15-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Trad_1329 45dbf7744d60de74f529c4cbdb19f3ea 391 PIRSF PIRSF001456 1 384 1.2E-112 T 15-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Trad_1329 45dbf7744d60de74f529c4cbdb19f3ea 391 SUPERFAMILY SSF103263 1 388 5.89E-127 T 15-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Trad_1329 45dbf7744d60de74f529c4cbdb19f3ea 391 ProSitePatterns PS00788 Chorismate synthase signature 2. 129 145 - T 15-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Trad_1329 45dbf7744d60de74f529c4cbdb19f3ea 391 Pfam PF01264 Chorismate synthase 2 366 6.1E-109 T 15-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Trad_1329 45dbf7744d60de74f529c4cbdb19f3ea 391 TIGRFAM TIGR00033 aroC: chorismate synthase 2 371 3.9E-107 T 15-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Trad_1329 45dbf7744d60de74f529c4cbdb19f3ea 391 Hamap MF_00300 Chorismate synthase [aroC]. 2 373 32.556 T 15-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Trad_2858 09ba440ae637deaac2ae60750a37e694 459 Pfam PF04932 O-Antigen ligase 237 375 1.4E-7 T 15-10-2018 IPR007016 O-antigen ligase-related Trad_0474 9610f5dd5390288530e47f1c0e2cfeff 725 SUPERFAMILY SSF64182 65 438 7.19E-107 T 15-10-2018 IPR038763 DHH phosphoesterase superfamily Trad_0474 9610f5dd5390288530e47f1c0e2cfeff 725 Pfam PF02272 DHHA1 domain 318 430 1.9E-12 T 15-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 Trad_0474 9610f5dd5390288530e47f1c0e2cfeff 725 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 38 546 1.6E-123 T 15-10-2018 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 Trad_0474 9610f5dd5390288530e47f1c0e2cfeff 725 Gene3D G3DSA:3.90.1640.30 57 322 8.9E-89 T 15-10-2018 Trad_0474 9610f5dd5390288530e47f1c0e2cfeff 725 Pfam PF01368 DHH family 83 207 7.5E-10 T 15-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Trad_0474 9610f5dd5390288530e47f1c0e2cfeff 725 Gene3D G3DSA:3.10.310.30 323 438 5.1E-35 T 15-10-2018 Trad_2763 00f55f4a5c5a91c0c31f37ae605f85b2 327 SUPERFAMILY SSF50129 1 140 6.7E-42 T 15-10-2018 IPR011032 GroES-like superfamily Trad_2763 00f55f4a5c5a91c0c31f37ae605f85b2 327 Gene3D G3DSA:3.40.50.720 123 271 1.4E-102 T 15-10-2018 Trad_2763 00f55f4a5c5a91c0c31f37ae605f85b2 327 SUPERFAMILY SSF51735 112 271 4.15E-44 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_2763 00f55f4a5c5a91c0c31f37ae605f85b2 327 SMART SM00829 10 325 3.3E-72 T 15-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Trad_2763 00f55f4a5c5a91c0c31f37ae605f85b2 327 Gene3D G3DSA:3.90.180.10 9 324 1.4E-102 T 15-10-2018 Trad_2763 00f55f4a5c5a91c0c31f37ae605f85b2 327 Pfam PF00107 Zinc-binding dehydrogenase 151 275 4.1E-30 T 15-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Trad_2763 00f55f4a5c5a91c0c31f37ae605f85b2 327 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 87 5.3E-12 T 15-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Trad_2001 139a4da2e22e4a98947e1e27d7ffae07 361 Pfam PF04371 Porphyromonas-type peptidyl-arginine deiminase 19 351 1.0E-118 T 15-10-2018 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type GO:0004668|GO:0009446 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 Trad_2001 139a4da2e22e4a98947e1e27d7ffae07 361 SUPERFAMILY SSF55909 11 352 1.14E-125 T 15-10-2018 Trad_2001 139a4da2e22e4a98947e1e27d7ffae07 361 Gene3D G3DSA:3.75.10.10 13 359 7.2E-130 T 15-10-2018 Trad_1026 e1e8e759ba101344b72d7e0e9124cd38 1010 TIGRFAM TIGR04519 MoCo_extend_TAT: MoCo/4Fe-4S cofactor protein extended Tat translocation domain 34 74 3.9E-16 T 15-10-2018 IPR030948 MoCo/4Fe-4S cofactor protein extended Tat translocation domain Trad_1026 e1e8e759ba101344b72d7e0e9124cd38 1010 SUPERFAMILY SSF53706 127 521 2.13E-29 T 15-10-2018 Trad_1026 e1e8e759ba101344b72d7e0e9124cd38 1010 Pfam PF12838 4Fe-4S dicluster domain 780 851 3.7E-7 T 15-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Trad_1026 e1e8e759ba101344b72d7e0e9124cd38 1010 Pfam PF12838 4Fe-4S dicluster domain 866 954 3.6E-10 T 15-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Trad_1026 e1e8e759ba101344b72d7e0e9124cd38 1010 Gene3D G3DSA:2.20.25.90 124 171 8.3E-7 T 15-10-2018 Trad_1026 e1e8e759ba101344b72d7e0e9124cd38 1010 Gene3D G3DSA:3.30.70.20 769 861 7.5E-18 T 15-10-2018 Trad_1026 e1e8e759ba101344b72d7e0e9124cd38 1010 Gene3D G3DSA:3.30.70.20 862 998 1.7E-28 T 15-10-2018 Trad_1026 e1e8e759ba101344b72d7e0e9124cd38 1010 SUPERFAMILY SSF50692 603 684 1.13E-6 T 15-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily Trad_1026 e1e8e759ba101344b72d7e0e9124cd38 1010 Gene3D G3DSA:3.40.50.740 382 529 1.4E-7 T 15-10-2018 Trad_1026 e1e8e759ba101344b72d7e0e9124cd38 1010 SUPERFAMILY SSF54862 771 993 6.49E-52 T 15-10-2018 Trad_2594 b55db9ae4643718334579d575c4f6b96 129 Pfam PF12680 SnoaL-like domain 10 113 4.1E-14 T 15-10-2018 IPR037401 SnoaL-like domain Trad_2594 b55db9ae4643718334579d575c4f6b96 129 SUPERFAMILY SSF54427 5 128 1.0E-24 T 15-10-2018 IPR032710 NTF2-like domain superfamily Trad_2594 b55db9ae4643718334579d575c4f6b96 129 Gene3D G3DSA:3.10.450.50 2 128 2.4E-23 T 15-10-2018 Trad_0069 48b7600a2c3ac0cd2b051ac7a23a3b22 171 Pfam PF01782 RimM N-terminal domain 12 90 3.1E-8 T 15-10-2018 IPR002676 RimM, N-terminal GO:0006364 Trad_0069 48b7600a2c3ac0cd2b051ac7a23a3b22 171 SUPERFAMILY SSF50447 10 94 3.39E-6 T 15-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Trad_0069 48b7600a2c3ac0cd2b051ac7a23a3b22 171 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 10 153 3.7E-19 T 15-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 Trad_0069 48b7600a2c3ac0cd2b051ac7a23a3b22 171 SUPERFAMILY SSF50346 73 153 8.11E-9 T 15-10-2018 IPR011033 PRC-barrel-like superfamily Trad_0069 48b7600a2c3ac0cd2b051ac7a23a3b22 171 Gene3D G3DSA:2.40.30.60 8 95 2.0E-29 T 15-10-2018 IPR036976 RimM, N-terminal domain superfamily GO:0006364 Trad_0069 48b7600a2c3ac0cd2b051ac7a23a3b22 171 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 9 168 14.376 T 15-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 Trad_0069 48b7600a2c3ac0cd2b051ac7a23a3b22 171 Gene3D G3DSA:2.30.30.240 96 162 4.5E-8 T 15-10-2018 Trad_2254 ce74fc041a0f17d1d29b4ca8aec2dd24 343 Gene3D G3DSA:3.40.190.10 32 298 1.1E-77 T 15-10-2018 Trad_2254 ce74fc041a0f17d1d29b4ca8aec2dd24 343 Gene3D G3DSA:3.40.190.10 110 210 1.1E-77 T 15-10-2018 Trad_2254 ce74fc041a0f17d1d29b4ca8aec2dd24 343 SUPERFAMILY SSF53850 31 277 8.02E-31 T 15-10-2018 Trad_2254 ce74fc041a0f17d1d29b4ca8aec2dd24 343 Pfam PF09084 NMT1/THI5 like 39 252 3.0E-57 T 15-10-2018 IPR015168 SsuA/THI5-like Trad_0030 805c813a66bd313868915c09c7ea8693 203 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 4 203 37.947 T 15-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 Trad_0030 805c813a66bd313868915c09c7ea8693 203 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 6 198 3.8E-47 T 15-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 Trad_0030 805c813a66bd313868915c09c7ea8693 203 Gene3D G3DSA:3.20.20.70 4 203 5.9E-70 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Trad_0030 805c813a66bd313868915c09c7ea8693 203 SUPERFAMILY SSF51366 5 201 3.45E-59 T 15-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Trad_2799 ac13654a5d167e277c80affea64245b6 282 Gene3D G3DSA:3.30.1180.10 152 279 9.4E-38 T 15-10-2018 Trad_2799 ac13654a5d167e277c80affea64245b6 282 Pfam PF02645 Uncharacterised protein, DegV family COG1307 2 278 9.7E-86 T 15-10-2018 IPR003797 DegV Trad_2799 ac13654a5d167e277c80affea64245b6 282 TIGRFAM TIGR00762 DegV: EDD domain protein, DegV family 3 276 9.3E-89 T 15-10-2018 IPR003797 DegV Trad_2799 ac13654a5d167e277c80affea64245b6 282 SUPERFAMILY SSF82549 2 277 2.62E-84 T 15-10-2018 Trad_2799 ac13654a5d167e277c80affea64245b6 282 Gene3D G3DSA:3.40.50.10170 2 150 2.8E-51 T 15-10-2018 Trad_2033 22375187d456206dfa2e05c20b6670ae 92 SUPERFAMILY SSF82771 3 73 5.62E-12 T 15-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 Trad_2033 22375187d456206dfa2e05c20b6670ae 92 Gene3D G3DSA:3.40.1440.10 1 91 1.6E-31 T 15-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 Trad_2033 22375187d456206dfa2e05c20b6670ae 92 Pfam PF01541 GIY-YIG catalytic domain 3 74 2.7E-14 T 15-10-2018 IPR000305 GIY-YIG endonuclease Trad_2345 aceb82496f27f0e96a0af4ae9672a04a 238 SUPERFAMILY SSF81338 11 204 6.54E-36 T 15-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 Trad_2345 aceb82496f27f0e96a0af4ae9672a04a 238 PRINTS PR00783 Major intrinsic protein family signature 14 33 2.6E-19 T 15-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Trad_2345 aceb82496f27f0e96a0af4ae9672a04a 238 PRINTS PR00783 Major intrinsic protein family signature 79 98 2.6E-19 T 15-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Trad_2345 aceb82496f27f0e96a0af4ae9672a04a 238 PRINTS PR00783 Major intrinsic protein family signature 147 169 2.6E-19 T 15-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Trad_2345 aceb82496f27f0e96a0af4ae9672a04a 238 PRINTS PR00783 Major intrinsic protein family signature 184 204 2.6E-19 T 15-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Trad_2345 aceb82496f27f0e96a0af4ae9672a04a 238 PRINTS PR00783 Major intrinsic protein family signature 117 135 2.6E-19 T 15-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Trad_2345 aceb82496f27f0e96a0af4ae9672a04a 238 ProSitePatterns PS00221 MIP family signature. 60 68 - T 15-10-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 Trad_2345 aceb82496f27f0e96a0af4ae9672a04a 238 Gene3D G3DSA:1.20.1080.10 113 233 1.8E-10 T 15-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 Trad_2345 aceb82496f27f0e96a0af4ae9672a04a 238 Pfam PF00230 Major intrinsic protein 40 203 8.9E-21 T 15-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Trad_2345 aceb82496f27f0e96a0af4ae9672a04a 238 Gene3D G3DSA:1.20.1080.10 4 112 1.7E-22 T 15-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 Trad_0031 3002773b5dd926e856fdc7028f4160bf 556 SUPERFAMILY SSF52096 284 547 4.62E-74 T 15-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Trad_0031 3002773b5dd926e856fdc7028f4160bf 556 SUPERFAMILY SSF52096 26 268 2.34E-59 T 15-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Trad_0031 3002773b5dd926e856fdc7028f4160bf 556 Gene3D G3DSA:3.90.226.10 16 271 2.2E-80 T 15-10-2018 Trad_0031 3002773b5dd926e856fdc7028f4160bf 556 Pfam PF01039 Carboxyl transferase domain 50 545 3.5E-133 T 15-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 Trad_0031 3002773b5dd926e856fdc7028f4160bf 556 Gene3D G3DSA:3.90.226.10 278 553 2.5E-86 T 15-10-2018 Trad_0114 37b7818b11f71bb17ba36c504ee27bee 197 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 78 6.1E-6 T 15-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain Trad_0114 37b7818b11f71bb17ba36c504ee27bee 197 SUPERFAMILY SSF54909 1 81 3.41E-9 T 15-10-2018 IPR011008 Dimeric alpha-beta barrel Trad_0114 37b7818b11f71bb17ba36c504ee27bee 197 Gene3D G3DSA:3.30.70.100 1 105 5.7E-15 T 15-10-2018 Trad_1039 31132754a759150b07a6b540d59dd4f5 216 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 20 190 1.6E-61 T 15-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_1039 31132754a759150b07a6b540d59dd4f5 216 SUPERFAMILY SSF52166 20 188 1.31E-57 T 15-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 Trad_1039 31132754a759150b07a6b540d59dd4f5 216 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 3 199 28.306 T 15-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_1039 31132754a759150b07a6b540d59dd4f5 216 Pfam PF00573 Ribosomal protein L4/L1 family 21 192 6.8E-53 T 15-10-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 Trad_1039 31132754a759150b07a6b540d59dd4f5 216 Gene3D G3DSA:3.40.1370.10 5 195 8.7E-62 T 15-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 Trad_1714 afd81cffd2470d869f9573d723915b47 97 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 19 89 8.5E-17 T 15-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 Trad_1714 afd81cffd2470d869f9573d723915b47 97 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 1 94 21.489 T 15-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 Trad_1714 afd81cffd2470d869f9573d723915b47 97 SUPERFAMILY SSF141000 1 91 3.01E-24 T 15-10-2018 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C GO:0006450 Trad_1714 afd81cffd2470d869f9573d723915b47 97 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 2 94 5.1E-28 T 15-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 Trad_1714 afd81cffd2470d869f9573d723915b47 97 Gene3D G3DSA:1.10.20.60 1 92 3.6E-25 T 15-10-2018 Trad_0950 944dfaa584068d7e58b4fa4db5c1512d 429 SUPERFAMILY SSF48208 20 429 2.38E-74 T 15-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 Trad_0950 944dfaa584068d7e58b4fa4db5c1512d 429 Pfam PF01204 Trehalase 272 396 3.9E-12 T 15-10-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 Trad_0950 944dfaa584068d7e58b4fa4db5c1512d 429 Gene3D G3DSA:1.50.10.10 5 428 4.1E-131 T 15-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 Trad_2019 9c01a6903e347aed84dce5e177f7d343 108 SUPERFAMILY SSF159468 4 106 1.44E-18 T 15-10-2018 IPR036906 ATPase, V1 complex, subunit F superfamily GO:0034220 Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 Trad_2019 9c01a6903e347aed84dce5e177f7d343 108 Gene3D G3DSA:3.40.50.10580 4 103 4.3E-18 T 15-10-2018 IPR036906 ATPase, V1 complex, subunit F superfamily GO:0034220 Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 Trad_2019 9c01a6903e347aed84dce5e177f7d343 108 Pfam PF01990 ATP synthase (F/14-kDa) subunit 5 89 1.8E-14 T 15-10-2018 IPR008218 ATPase, V1 complex, subunit F GO:0034220 Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 Trad_1886 47c66944d4d3570015d7e9781220932d 396 Pfam PF13458 Periplasmic binding protein 25 386 1.3E-56 T 15-10-2018 IPR028081 Leucine-binding protein domain Trad_1886 47c66944d4d3570015d7e9781220932d 396 Gene3D G3DSA:3.40.50.2300 27 373 3.1E-107 T 15-10-2018 Trad_1886 47c66944d4d3570015d7e9781220932d 396 SUPERFAMILY SSF53822 24 391 1.74E-75 T 15-10-2018 IPR028082 Periplasmic binding protein-like I Trad_1886 47c66944d4d3570015d7e9781220932d 396 Gene3D G3DSA:3.40.50.2300 148 383 3.1E-107 T 15-10-2018 Trad_2505 a35883f475f8e9cf050fc09521434dfc 213 PIRSF PIRSF015000 2 213 1.3E-68 T 15-10-2018 IPR014470 Uncharacterised conserved protein UCP01500 Trad_2505 a35883f475f8e9cf050fc09521434dfc 213 Pfam PF10028 Predicted integral membrane protein (DUF2270) 19 200 8.1E-64 T 15-10-2018 IPR014470 Uncharacterised conserved protein UCP01500 Trad_1704 161abb4eabbf9a0487660d76b938b21a 274 PIRSF PIRSF004793 29 274 1.7E-72 T 15-10-2018 IPR014046 Diadenylate cyclase GO:0004016|GO:0006171 Trad_1704 161abb4eabbf9a0487660d76b938b21a 274 Gene3D G3DSA:3.40.1700.10 122 272 6.1E-47 T 15-10-2018 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily Trad_1704 161abb4eabbf9a0487660d76b938b21a 274 SUPERFAMILY SSF143597 66 256 1.83E-51 T 15-10-2018 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily Trad_1704 161abb4eabbf9a0487660d76b938b21a 274 TIGRFAM TIGR00159 TIGR00159: TIGR00159 family protein 37 266 5.6E-60 T 15-10-2018 IPR034701 Diadenylate cyclase CdaA GO:0004016|GO:0006171 Trad_1704 161abb4eabbf9a0487660d76b938b21a 274 Hamap MF_01499 Diadenylate cyclase [dacA]. 28 273 29.28 T 15-10-2018 IPR034701 Diadenylate cyclase CdaA GO:0004016|GO:0006171 Trad_1704 161abb4eabbf9a0487660d76b938b21a 274 Pfam PF02457 DisA bacterial checkpoint controller nucleotide-binding 136 254 1.2E-34 T 15-10-2018 IPR003390 DNA integrity scanning protein, DisA, N-terminal Trad_2609 6a7291062476ae384d1cc3e2830dc9bc 525 Gene3D G3DSA:1.10.3720.10 6 259 1.4E-54 T 15-10-2018 IPR035906 MetI-like superfamily Trad_2609 6a7291062476ae384d1cc3e2830dc9bc 525 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 349 521 3.9E-8 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Trad_2609 6a7291062476ae384d1cc3e2830dc9bc 525 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 72 255 1.7E-12 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Trad_2609 6a7291062476ae384d1cc3e2830dc9bc 525 Gene3D G3DSA:1.10.3720.10 273 524 4.3E-43 T 15-10-2018 IPR035906 MetI-like superfamily Trad_2609 6a7291062476ae384d1cc3e2830dc9bc 525 SUPERFAMILY SSF161098 7 253 4.95E-46 T 15-10-2018 IPR035906 MetI-like superfamily Trad_2609 6a7291062476ae384d1cc3e2830dc9bc 525 SUPERFAMILY SSF161098 271 523 7.3E-44 T 15-10-2018 IPR035906 MetI-like superfamily Trad_0921 92631ae7a6ec2eaf224a99d3ad397b02 458 SUPERFAMILY SSF51556 54 382 1.27E-99 T 15-10-2018 IPR032466 Metal-dependent hydrolase Trad_0921 92631ae7a6ec2eaf224a99d3ad397b02 458 SUPERFAMILY SSF51338 358 455 5.28E-34 T 15-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Trad_0921 92631ae7a6ec2eaf224a99d3ad397b02 458 Pfam PF01979 Amidohydrolase family 50 435 4.2E-35 T 15-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Trad_0921 92631ae7a6ec2eaf224a99d3ad397b02 458 SUPERFAMILY SSF51338 3 65 6.79E-12 T 15-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Trad_0921 92631ae7a6ec2eaf224a99d3ad397b02 458 Gene3D G3DSA:2.30.40.10 4 450 1.1E-172 T 15-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Trad_0921 92631ae7a6ec2eaf224a99d3ad397b02 458 TIGRFAM TIGR02033 D-hydantoinase: dihydropyrimidinase 3 454 3.6E-155 T 15-10-2018 IPR011778 Hydantoinase/dihydropyrimidinase GO:0005737 Reactome: R-HSA-399956 Trad_0921 92631ae7a6ec2eaf224a99d3ad397b02 458 Gene3D G3DSA:3.20.20.140 54 382 1.1E-172 T 15-10-2018 Trad_1319 59084be7afc712e04bdb5c0517f4ec7d 395 Pfam PF00557 Metallopeptidase family M24 162 379 3.4E-38 T 15-10-2018 IPR000994 Peptidase M24 Trad_1319 59084be7afc712e04bdb5c0517f4ec7d 395 SUPERFAMILY SSF55920 151 395 1.96E-48 T 15-10-2018 IPR036005 Creatinase/aminopeptidase-like Trad_1319 59084be7afc712e04bdb5c0517f4ec7d 395 Gene3D G3DSA:3.90.230.10 154 388 1.5E-49 T 15-10-2018 Trad_1319 59084be7afc712e04bdb5c0517f4ec7d 395 PRINTS PR00599 Methionine aminopeptidase-1 signature 344 356 1.5E-6 T 15-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Trad_1319 59084be7afc712e04bdb5c0517f4ec7d 395 PRINTS PR00599 Methionine aminopeptidase-1 signature 309 321 1.5E-6 T 15-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Trad_1319 59084be7afc712e04bdb5c0517f4ec7d 395 PRINTS PR00599 Methionine aminopeptidase-1 signature 234 250 1.5E-6 T 15-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Trad_0186 f9a8d94a4a3faa18c48aab4aec2f8af9 597 SMART SM00382 371 566 3.1E-16 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_0186 f9a8d94a4a3faa18c48aab4aec2f8af9 597 Pfam PF00664 ABC transporter transmembrane region 37 303 2.8E-43 T 15-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Trad_0186 f9a8d94a4a3faa18c48aab4aec2f8af9 597 SUPERFAMILY SSF90123 13 332 4.58E-73 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Trad_0186 f9a8d94a4a3faa18c48aab4aec2f8af9 597 Pfam PF00005 ABC transporter 362 511 3.5E-34 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Trad_0186 f9a8d94a4a3faa18c48aab4aec2f8af9 597 SUPERFAMILY SSF52540 339 582 1.13E-87 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_0186 f9a8d94a4a3faa18c48aab4aec2f8af9 597 ProSitePatterns PS00211 ABC transporters family signature. 483 497 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Trad_0186 f9a8d94a4a3faa18c48aab4aec2f8af9 597 Gene3D G3DSA:1.20.1560.10 3 334 4.3E-80 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Trad_0186 f9a8d94a4a3faa18c48aab4aec2f8af9 597 Gene3D G3DSA:3.40.50.300 337 594 8.8E-89 T 15-10-2018 Trad_1389 c9017fedd394e261a4828864c1d04653 423 Hamap MF_01027 3-isopropylmalate dehydratase large subunit [leuC]. 9 415 44.341 T 15-10-2018 IPR011826 Homoaconitase/3-isopropylmalate dehydratase, large subunit, prokaryotic GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 Trad_1389 c9017fedd394e261a4828864c1d04653 423 TIGRFAM TIGR02086 IPMI_arch: 3-isopropylmalate dehydratase, large subunit 10 411 9.3E-162 T 15-10-2018 IPR011826 Homoaconitase/3-isopropylmalate dehydratase, large subunit, prokaryotic GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 Trad_1389 c9017fedd394e261a4828864c1d04653 423 SUPERFAMILY SSF53732 5 413 1.26E-119 T 15-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 Trad_1389 c9017fedd394e261a4828864c1d04653 423 TIGRFAM TIGR01343 hacA_fam: homoaconitate hydratase family protein 10 410 2.5E-163 T 15-10-2018 IPR006251 Homoaconitase/3-isopropylmalate dehydratase, large subunit GO:0008652|GO:0016836|GO:0051539 KEGG: 00290+4.2.1.33 Trad_1389 c9017fedd394e261a4828864c1d04653 423 PRINTS PR00415 Aconitase family signature 117 130 2.8E-7 T 15-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Trad_1389 c9017fedd394e261a4828864c1d04653 423 PRINTS PR00415 Aconitase family signature 131 146 2.8E-7 T 15-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Trad_1389 c9017fedd394e261a4828864c1d04653 423 PRINTS PR00415 Aconitase family signature 348 361 2.8E-7 T 15-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Trad_1389 c9017fedd394e261a4828864c1d04653 423 ProSitePatterns PS00450 Aconitase family signature 1. 288 304 - T 15-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 Trad_1389 c9017fedd394e261a4828864c1d04653 423 Pfam PF00330 Aconitase family (aconitate hydratase) 88 407 6.8E-77 T 15-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Trad_1389 c9017fedd394e261a4828864c1d04653 423 Gene3D G3DSA:3.30.499.10 269 412 1.3E-51 T 15-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 Trad_1389 c9017fedd394e261a4828864c1d04653 423 ProSitePatterns PS01244 Aconitase family signature 2. 348 361 - T 15-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 Trad_1389 c9017fedd394e261a4828864c1d04653 423 Gene3D G3DSA:3.30.499.20 10 266 3.6E-75 T 15-10-2018 Trad_1935 038ae1e462820d44117d5cdbb0790a1c 367 PIRSF PIRSF039026 1 358 7.5E-119 T 15-10-2018 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like Trad_1935 038ae1e462820d44117d5cdbb0790a1c 367 SUPERFAMILY SSF53850 122 288 4.34E-6 T 15-10-2018 Trad_1935 038ae1e462820d44117d5cdbb0790a1c 367 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 39 319 4.6E-57 T 15-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 Trad_1935 038ae1e462820d44117d5cdbb0790a1c 367 Gene3D G3DSA:3.40.190.10 153 324 6.4E-115 T 15-10-2018 Trad_1935 038ae1e462820d44117d5cdbb0790a1c 367 Gene3D G3DSA:3.40.190.170 36 338 6.4E-115 T 15-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily Trad_1605 64164595f4a0b843a8998bf0692ad2e1 359 Pfam PF01098 Cell cycle protein 27 343 3.5E-57 T 15-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Trad_2157 b2ef1e24bc521dc7304dd85fcfa5fe23 112 SUPERFAMILY SSF46785 3 99 1.28E-24 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Trad_2157 b2ef1e24bc521dc7304dd85fcfa5fe23 112 Pfam PF12840 Helix-turn-helix domain 9 76 4.2E-13 T 15-10-2018 Trad_2157 b2ef1e24bc521dc7304dd85fcfa5fe23 112 Gene3D G3DSA:1.10.10.10 1 106 3.4E-28 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Trad_2157 b2ef1e24bc521dc7304dd85fcfa5fe23 112 ProSitePatterns PS00846 Bacterial regulatory proteins, arsR family signature. 41 59 - T 15-10-2018 IPR018334 ArsR-type transcription regulator, HTH motif GO:0003700|GO:0005622|GO:0006355 Trad_2157 b2ef1e24bc521dc7304dd85fcfa5fe23 112 SMART SM00418 9 95 1.3E-20 T 15-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Trad_0595 67e7ae96c22f0f36b7ec2d95d8bf8ec6 310 TIGRFAM TIGR00629 uvde: UV damage endonuclease UvdE 6 299 4.1E-64 T 15-10-2018 IPR004601 UV-endonuclease UvdE GO:0004519|GO:0006289|GO:0009411 Trad_0595 67e7ae96c22f0f36b7ec2d95d8bf8ec6 310 SUPERFAMILY SSF51658 71 276 4.02E-13 T 15-10-2018 IPR036237 Xylose isomerase-like superfamily Trad_0595 67e7ae96c22f0f36b7ec2d95d8bf8ec6 310 Pfam PF03851 UV-endonuclease UvdE 19 258 2.3E-64 T 15-10-2018 IPR004601 UV-endonuclease UvdE GO:0004519|GO:0006289|GO:0009411 Trad_0595 67e7ae96c22f0f36b7ec2d95d8bf8ec6 310 Gene3D G3DSA:3.20.20.150 4 302 9.0E-91 T 15-10-2018 Trad_2356 08dbbc528d2d38c044405abd804bfd8f 286 Pfam PF00005 ABC transporter 42 192 8.5E-26 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Trad_2356 08dbbc528d2d38c044405abd804bfd8f 286 Gene3D G3DSA:3.40.50.300 22 265 1.0E-57 T 15-10-2018 Trad_2356 08dbbc528d2d38c044405abd804bfd8f 286 SUPERFAMILY SSF52540 25 263 4.88E-55 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_2356 08dbbc528d2d38c044405abd804bfd8f 286 SMART SM00382 51 243 1.6E-8 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_0073 ec0604f0aa4b20da4ee9a8ba8282f38f 463 Pfam PF13432 Tetratricopeptide repeat 125 187 6.3E-8 T 15-10-2018 Trad_0073 ec0604f0aa4b20da4ee9a8ba8282f38f 463 Pfam PF13432 Tetratricopeptide repeat 385 440 2.5E-6 T 15-10-2018 Trad_0073 ec0604f0aa4b20da4ee9a8ba8282f38f 463 SMART SM00028 414 447 0.81 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Trad_0073 ec0604f0aa4b20da4ee9a8ba8282f38f 463 SMART SM00028 119 152 150.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Trad_0073 ec0604f0aa4b20da4ee9a8ba8282f38f 463 SMART SM00028 206 239 24.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Trad_0073 ec0604f0aa4b20da4ee9a8ba8282f38f 463 SMART SM00028 327 360 340.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Trad_0073 ec0604f0aa4b20da4ee9a8ba8282f38f 463 SMART SM00028 153 186 12.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Trad_0073 ec0604f0aa4b20da4ee9a8ba8282f38f 463 SMART SM00028 380 413 250.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Trad_0073 ec0604f0aa4b20da4ee9a8ba8282f38f 463 Pfam PF14559 Tetratricopeptide repeat 218 276 1.2E-5 T 15-10-2018 Trad_0073 ec0604f0aa4b20da4ee9a8ba8282f38f 463 Gene3D G3DSA:1.25.40.10 54 278 9.0E-29 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Trad_0073 ec0604f0aa4b20da4ee9a8ba8282f38f 463 Gene3D G3DSA:1.25.40.10 287 385 5.4E-9 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Trad_0073 ec0604f0aa4b20da4ee9a8ba8282f38f 463 SUPERFAMILY SSF48452 124 366 6.58E-21 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Trad_0073 ec0604f0aa4b20da4ee9a8ba8282f38f 463 Pfam PF13174 Tetratricopeptide repeat 332 359 0.0082 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Trad_0073 ec0604f0aa4b20da4ee9a8ba8282f38f 463 Gene3D G3DSA:1.25.40.10 386 463 4.4E-9 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Trad_0073 ec0604f0aa4b20da4ee9a8ba8282f38f 463 SUPERFAMILY SSF48452 382 458 4.3E-9 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Trad_1933 f8603503194397989b9625f75be750b9 211 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 29 166 9.1E-23 T 15-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ Trad_1415 57ff028be7c89ce3b4f2964125e7e3b5 354 SUPERFAMILY SSF53850 29 352 2.72E-55 T 15-10-2018 Trad_1415 57ff028be7c89ce3b4f2964125e7e3b5 354 Gene3D G3DSA:3.40.190.10 35 349 1.6E-57 T 15-10-2018 Trad_1415 57ff028be7c89ce3b4f2964125e7e3b5 354 Gene3D G3DSA:3.40.190.10 141 265 1.6E-57 T 15-10-2018 Trad_1415 57ff028be7c89ce3b4f2964125e7e3b5 354 Pfam PF13416 Bacterial extracellular solute-binding protein 51 308 1.0E-32 T 15-10-2018 IPR006059 Bacterial extracellular solute-binding protein Trad_0852 83e3f0b550460d3c2882998803267cea 475 Pfam PF00571 CBS domain 198 251 6.4E-4 T 15-10-2018 IPR000644 CBS domain Trad_0852 83e3f0b550460d3c2882998803267cea 475 SUPERFAMILY SSF158791 15 129 6.54E-22 T 15-10-2018 Trad_0852 83e3f0b550460d3c2882998803267cea 475 Pfam PF03448 MgtE intracellular N domain 32 130 7.8E-22 T 15-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain Trad_0852 83e3f0b550460d3c2882998803267cea 475 Gene3D G3DSA:3.10.580.10 128 255 1.3E-27 T 15-10-2018 Trad_0852 83e3f0b550460d3c2882998803267cea 475 SMART SM00924 29 132 9.7E-26 T 15-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain Trad_0852 83e3f0b550460d3c2882998803267cea 475 SUPERFAMILY SSF54631 132 266 8.84E-24 T 15-10-2018 Trad_0852 83e3f0b550460d3c2882998803267cea 475 TIGRFAM TIGR00400 mgtE: magnesium transporter 18 459 1.5E-91 T 15-10-2018 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 Trad_0852 83e3f0b550460d3c2882998803267cea 475 SMART SM00116 203 251 2.1E-4 T 15-10-2018 IPR000644 CBS domain Trad_0852 83e3f0b550460d3c2882998803267cea 475 Gene3D G3DSA:1.10.357.20 279 458 4.3E-47 T 15-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain Trad_0852 83e3f0b550460d3c2882998803267cea 475 Gene3D G3DSA:1.25.60.10 12 127 1.3E-19 T 15-10-2018 IPR038076 MgtE, N-terminal domain superfamily Trad_0852 83e3f0b550460d3c2882998803267cea 475 Pfam PF01769 Divalent cation transporter 326 451 1.2E-26 T 15-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 Trad_0852 83e3f0b550460d3c2882998803267cea 475 SUPERFAMILY SSF161093 283 457 4.84E-42 T 15-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 Trad_0821 f05c6688b29e44a5f8de5457cf0e0920 153 SUPERFAMILY SSF55040 7 151 2.22E-53 T 15-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Trad_0821 f05c6688b29e44a5f8de5457cf0e0920 153 Pfam PF01967 MoaC family 11 146 1.0E-47 T 15-10-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Trad_0821 f05c6688b29e44a5f8de5457cf0e0920 153 Gene3D G3DSA:3.30.70.640 1 153 8.2E-61 T 15-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Trad_0821 f05c6688b29e44a5f8de5457cf0e0920 153 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 5 148 1.8E-53 T 15-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Trad_1200 e9bc6d6755e621bb3b6e2043acb9feb5 440 SUPERFAMILY SSF161098 79 440 1.7E-50 T 15-10-2018 IPR035906 MetI-like superfamily Trad_1200 e9bc6d6755e621bb3b6e2043acb9feb5 440 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 253 429 9.2E-17 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Trad_2059 c8f05dda00b472671294d2de654a76d2 624 Pfam PF00561 alpha/beta hydrolase fold 107 304 1.3E-16 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Trad_2059 c8f05dda00b472671294d2de654a76d2 624 SUPERFAMILY SSF53474 155 546 3.18E-15 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold Trad_2059 c8f05dda00b472671294d2de654a76d2 624 Pfam PF08386 TAP-like protein 466 554 1.5E-15 T 15-10-2018 IPR013595 Peptidase S33 tripeptidyl aminopeptidase-like, C-terminal Trad_0159 9ae31de46b0e15d74d7f652d4b66ba34 343 Pfam PF00005 ABC transporter 30 189 2.6E-21 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Trad_0159 9ae31de46b0e15d74d7f652d4b66ba34 343 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 240 323 5.6E-26 T 15-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Trad_0159 9ae31de46b0e15d74d7f652d4b66ba34 343 ProSitePatterns PS00211 ABC transporters family signature. 162 176 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Trad_0159 9ae31de46b0e15d74d7f652d4b66ba34 343 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 241 304 2.5E-18 T 15-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Trad_0159 9ae31de46b0e15d74d7f652d4b66ba34 343 SMART SM00382 38 239 4.8E-11 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_0159 9ae31de46b0e15d74d7f652d4b66ba34 343 SUPERFAMILY SSF52540 6 260 3.19E-52 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_0159 9ae31de46b0e15d74d7f652d4b66ba34 343 Gene3D G3DSA:3.40.50.300 3 336 4.4E-85 T 15-10-2018 Trad_0486 411c42bcdc5d91fe9dfd463ae763937d 179 Pfam PF05685 Putative restriction endonuclease 11 171 2.8E-31 T 15-10-2018 IPR008538 Domain of unknown function DUF820 Trad_0486 411c42bcdc5d91fe9dfd463ae763937d 179 SUPERFAMILY SSF52980 3 153 8.58E-23 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 Trad_0486 411c42bcdc5d91fe9dfd463ae763937d 179 Gene3D G3DSA:3.90.1570.10 2 167 7.0E-20 T 15-10-2018 Trad_2468 fd781e8f305239230b2fc5643d23b847 297 Gene3D G3DSA:1.10.3720.10 4 288 2.9E-51 T 15-10-2018 IPR035906 MetI-like superfamily Trad_2468 fd781e8f305239230b2fc5643d23b847 297 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 95 286 2.8E-14 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Trad_2468 fd781e8f305239230b2fc5643d23b847 297 SUPERFAMILY SSF161098 5 286 1.5E-52 T 15-10-2018 IPR035906 MetI-like superfamily Trad_0803 fb8cee89cab19439f3dca1f539b3eff6 119 Pfam PF04020 Mycobacterial 4 TMS phage holin, superfamily IV 1 106 2.8E-26 T 15-10-2018 IPR007165 Mycobacterial 4 TMS phage holin, superfamily IV Trad_2817 528d2670210caf45d3fd7ccd1f32338f 131 Gene3D G3DSA:1.20.1440.60 11 131 2.1E-36 T 15-10-2018 IPR036583 23S rRNA-intervening sequence superfamily Trad_2817 528d2670210caf45d3fd7ccd1f32338f 131 TIGRFAM TIGR02436 TIGR02436: four helix bundle protein 22 127 2.5E-32 T 15-10-2018 IPR012657 23S rRNA-intervening sequence protein Trad_2817 528d2670210caf45d3fd7ccd1f32338f 131 Pfam PF05635 23S rRNA-intervening sequence protein 17 121 2.0E-33 T 15-10-2018 IPR012657 23S rRNA-intervening sequence protein Trad_2817 528d2670210caf45d3fd7ccd1f32338f 131 SUPERFAMILY SSF158446 15 127 2.49E-34 T 15-10-2018 IPR036583 23S rRNA-intervening sequence superfamily Trad_1018 1213a88e145a33ea89f466b16401c56b 558 Pfam PF02554 Carbon starvation protein CstA 1 347 4.1E-117 T 15-10-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 Trad_1018 1213a88e145a33ea89f466b16401c56b 558 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 388 508 8.8E-33 T 15-10-2018 IPR025299 CstA, C-terminal domain Trad_1603 3d415abad5d3862fd3d95dfe5d52cf8a 340 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 41 53 7.4E-5 T 15-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Trad_1603 3d415abad5d3862fd3d95dfe5d52cf8a 340 ProSitePatterns PS01348 MraY family signature 2. 187 198 - T 15-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Trad_1603 3d415abad5d3862fd3d95dfe5d52cf8a 340 Pfam PF00953 Glycosyl transferase family 4 138 256 4.6E-20 T 15-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 Trad_1603 3d415abad5d3862fd3d95dfe5d52cf8a 340 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 1 337 17.606 T 15-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Trad_1603 3d415abad5d3862fd3d95dfe5d52cf8a 340 ProSitePatterns PS01347 MraY family signature 1. 41 53 - T 15-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Trad_0709 c1f8ae6e7faf075dfcfe61f145f35e61 131 SUPERFAMILY SSF55486 2 109 2.38E-21 T 15-10-2018 Trad_0709 c1f8ae6e7faf075dfcfe61f145f35e61 131 Gene3D G3DSA:3.30.2010.20 1 130 7.8E-40 T 15-10-2018 IPR038555 Zincin-like metallopeptidase superfamily Trad_0709 c1f8ae6e7faf075dfcfe61f145f35e61 131 Pfam PF06262 Zincin-like metallopeptidase 31 103 8.2E-13 T 15-10-2018 IPR010428 Zincin-like metallopeptidase Trad_1522 fff3775fe3ea0f0a7f2114c8a54cf4b0 177 Pfam PF00929 Exonuclease 14 167 7.4E-14 T 15-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Trad_1522 fff3775fe3ea0f0a7f2114c8a54cf4b0 177 Gene3D G3DSA:3.30.420.10 8 174 1.5E-31 T 15-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Trad_1522 fff3775fe3ea0f0a7f2114c8a54cf4b0 177 SMART SM00479 12 177 4.7E-21 T 15-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Trad_1522 fff3775fe3ea0f0a7f2114c8a54cf4b0 177 SUPERFAMILY SSF53098 13 172 1.4E-27 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily Trad_0032 c625c1438989bb8941195b685510db0b 165 Pfam PF12867 DinB superfamily 24 147 1.3E-9 T 15-10-2018 IPR024775 DinB-like domain Trad_0032 c625c1438989bb8941195b685510db0b 165 Gene3D G3DSA:1.20.120.450 19 155 5.4E-10 T 15-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes Trad_0032 c625c1438989bb8941195b685510db0b 165 SUPERFAMILY SSF109854 23 155 9.16E-16 T 15-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes Trad_2405 a484e716f342d53768db75d876abcb3b 445 SUPERFAMILY SSF111352 48 407 1.7E-105 T 15-10-2018 Trad_2405 a484e716f342d53768db75d876abcb3b 445 ProSitePatterns PS01219 Ammonium transporters signature. 187 212 - T 15-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 Trad_2405 a484e716f342d53768db75d876abcb3b 445 Gene3D G3DSA:1.10.3430.10 25 439 1.6E-129 T 15-10-2018 IPR029020 Ammonium/urea transporter Trad_2405 a484e716f342d53768db75d876abcb3b 445 Pfam PF00909 Ammonium Transporter Family 50 426 4.0E-110 T 15-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 Trad_2405 a484e716f342d53768db75d876abcb3b 445 TIGRFAM TIGR00836 amt: ammonium transporter 49 426 7.6E-113 T 15-10-2018 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 Trad_1122 5d637e3b6c435600e56a04f8e8d336cd 360 Gene3D G3DSA:3.40.1830.10 3 156 4.1E-8 T 15-10-2018 IPR035097 Peptidase M29, N-terminal Trad_1122 5d637e3b6c435600e56a04f8e8d336cd 360 Pfam PF02073 Thermophilic metalloprotease (M29) 7 342 2.6E-77 T 15-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 Trad_1122 5d637e3b6c435600e56a04f8e8d336cd 360 SUPERFAMILY SSF144052 1 359 3.4E-100 T 15-10-2018 Trad_1406 64cc7f070bf0181dd528a6ea455e64c4 693 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 295 471 2.6E-62 T 15-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 Trad_1406 64cc7f070bf0181dd528a6ea455e64c4 693 SUPERFAMILY SSF48179 600 683 6.55E-19 T 15-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Trad_1406 64cc7f070bf0181dd528a6ea455e64c4 693 Gene3D G3DSA:3.90.226.10 7 279 1.2E-84 T 15-10-2018 Trad_1406 64cc7f070bf0181dd528a6ea455e64c4 693 Gene3D G3DSA:3.40.50.720 292 475 1.3E-65 T 15-10-2018 Trad_1406 64cc7f070bf0181dd528a6ea455e64c4 693 SUPERFAMILY SSF48179 474 581 1.11E-27 T 15-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Trad_1406 64cc7f070bf0181dd528a6ea455e64c4 693 Gene3D G3DSA:1.10.1040.50 477 689 4.1E-70 T 15-10-2018 Trad_1406 64cc7f070bf0181dd528a6ea455e64c4 693 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 475 567 2.6E-27 T 15-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 Trad_1406 64cc7f070bf0181dd528a6ea455e64c4 693 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 602 659 2.2E-6 T 15-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 Trad_1406 64cc7f070bf0181dd528a6ea455e64c4 693 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 94 114 - T 15-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 Trad_1406 64cc7f070bf0181dd528a6ea455e64c4 693 SUPERFAMILY SSF51735 291 471 4.74E-57 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_1406 64cc7f070bf0181dd528a6ea455e64c4 693 SUPERFAMILY SSF52096 6 285 4.15E-66 T 15-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Trad_1406 64cc7f070bf0181dd528a6ea455e64c4 693 Pfam PF00378 Enoyl-CoA hydratase/isomerase 11 195 6.6E-37 T 15-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 Trad_2214 c023d483a617bf6eba6c182b04fbd5ae 710 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 5 18 3.6E-28 T 15-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Trad_2214 c023d483a617bf6eba6c182b04fbd5ae 710 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 243 258 3.6E-28 T 15-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Trad_2214 c023d483a617bf6eba6c182b04fbd5ae 710 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 315 331 3.6E-28 T 15-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Trad_2214 c023d483a617bf6eba6c182b04fbd5ae 710 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 394 413 3.6E-28 T 15-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Trad_2214 c023d483a617bf6eba6c182b04fbd5ae 710 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 48 60 3.6E-28 T 15-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Trad_2214 c023d483a617bf6eba6c182b04fbd5ae 710 SUPERFAMILY SSF109604 352 486 6.91E-8 T 15-10-2018 Trad_2214 c023d483a617bf6eba6c182b04fbd5ae 710 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 3 705 1.3E-173 T 15-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Trad_2214 c023d483a617bf6eba6c182b04fbd5ae 710 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 4 554 1.2E-175 T 15-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Trad_2214 c023d483a617bf6eba6c182b04fbd5ae 710 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 1 705 22.037 T 15-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Trad_2346 884f57977daedce0ae7fee9f0f73bb69 373 Pfam PF14343 PrcB C-terminal 292 345 8.8E-15 T 15-10-2018 IPR025748 PrcB C-terminal domain Trad_2137 58797b2755275cca91b7682cf6ea62bb 408 SUPERFAMILY SSF48264 32 370 1.03E-47 T 15-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 Trad_2137 58797b2755275cca91b7682cf6ea62bb 408 Pfam PF00067 Cytochrome P450 266 369 4.9E-12 T 15-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Trad_2137 58797b2755275cca91b7682cf6ea62bb 408 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 343 352 - T 15-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 Trad_2137 58797b2755275cca91b7682cf6ea62bb 408 Gene3D G3DSA:1.10.630.10 5 402 1.1E-53 T 15-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 Trad_2137 58797b2755275cca91b7682cf6ea62bb 408 PRINTS PR00359 B-class P450 signature 188 210 3.9E-6 T 15-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Trad_2137 58797b2755275cca91b7682cf6ea62bb 408 PRINTS PR00359 B-class P450 signature 341 350 3.9E-6 T 15-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Trad_2137 58797b2755275cca91b7682cf6ea62bb 408 PRINTS PR00359 B-class P450 signature 350 361 3.9E-6 T 15-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Trad_2137 58797b2755275cca91b7682cf6ea62bb 408 PRINTS PR00359 B-class P450 signature 265 276 3.9E-6 T 15-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Trad_1581 242b2eb3e3eb93288f70271a0f2cc5b8 555 Gene3D G3DSA:3.40.50.620 415 540 9.4E-20 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Trad_1581 242b2eb3e3eb93288f70271a0f2cc5b8 555 Gene3D G3DSA:1.20.1530.20 1 400 8.4E-27 T 15-10-2018 IPR038770 Sodium/solute symporter superfamily Trad_1581 242b2eb3e3eb93288f70271a0f2cc5b8 555 SUPERFAMILY SSF52402 419 535 1.33E-20 T 15-10-2018 Trad_1581 242b2eb3e3eb93288f70271a0f2cc5b8 555 PRINTS PR01438 Universal stress protein signature 416 434 4.2E-7 T 15-10-2018 IPR006015 Universal stress protein A Trad_1581 242b2eb3e3eb93288f70271a0f2cc5b8 555 PRINTS PR01438 Universal stress protein signature 496 508 4.2E-7 T 15-10-2018 IPR006015 Universal stress protein A Trad_1581 242b2eb3e3eb93288f70271a0f2cc5b8 555 PRINTS PR01438 Universal stress protein signature 514 536 4.2E-7 T 15-10-2018 IPR006015 Universal stress protein A Trad_1581 242b2eb3e3eb93288f70271a0f2cc5b8 555 Pfam PF00582 Universal stress protein family 419 535 7.5E-16 T 15-10-2018 IPR006016 UspA Trad_1581 242b2eb3e3eb93288f70271a0f2cc5b8 555 Pfam PF00999 Sodium/hydrogen exchanger family 7 391 6.1E-32 T 15-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 Trad_1903 af10eee1192dffd7dda3c86810aabca4 330 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 30 322 4.5E-93 T 15-10-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 Trad_1903 af10eee1192dffd7dda3c86810aabca4 330 Gene3D G3DSA:1.10.3720.10 84 324 2.4E-36 T 15-10-2018 IPR035906 MetI-like superfamily Trad_1903 af10eee1192dffd7dda3c86810aabca4 330 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 105 325 2.6E-23 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Trad_1903 af10eee1192dffd7dda3c86810aabca4 330 SUPERFAMILY SSF161098 35 316 3.92E-36 T 15-10-2018 IPR035906 MetI-like superfamily Trad_2665 1c88f3f748caae4539b17db60205662a 160 SUPERFAMILY SSF53098 17 157 1.77E-49 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily Trad_2665 1c88f3f748caae4539b17db60205662a 160 Pfam PF00075 RNase H 17 155 1.5E-43 T 15-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 Trad_2665 1c88f3f748caae4539b17db60205662a 160 Gene3D G3DSA:3.30.420.10 13 160 7.1E-52 T 15-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Trad_2665 1c88f3f748caae4539b17db60205662a 160 Hamap MF_00042 Ribonuclease H [rnhA]. 16 160 31.104 T 15-10-2018 IPR022892 Ribonuclease HI GO:0004523 Trad_2057 b1d559b6eb925aada697bd05759768cc 609 Pfam PF01432 Peptidase family M3 208 590 3.6E-24 T 15-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 Trad_2057 b1d559b6eb925aada697bd05759768cc 609 TIGRFAM TIGR02290 M3_fam_3: oligoendopeptidase, pepF/M3 family 9 603 3.5E-171 T 15-10-2018 IPR011977 Peptidase M3B, oligoendopeptidase-related clade 3 Trad_2057 b1d559b6eb925aada697bd05759768cc 609 SUPERFAMILY SSF55486 6 588 5.8E-85 T 15-10-2018 Trad_2057 b1d559b6eb925aada697bd05759768cc 609 Gene3D G3DSA:1.10.1370.20 234 607 9.7E-110 T 15-10-2018 Trad_0249 238c16beb1dab7653bea1f0ad415f9ed 292 Pfam PF00892 EamA-like transporter family 9 133 2.1E-10 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Trad_0249 238c16beb1dab7653bea1f0ad415f9ed 292 Pfam PF00892 EamA-like transporter family 143 274 4.6E-15 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Trad_0249 238c16beb1dab7653bea1f0ad415f9ed 292 SUPERFAMILY SSF103481 39 136 9.42E-10 T 15-10-2018 Trad_0249 238c16beb1dab7653bea1f0ad415f9ed 292 SUPERFAMILY SSF103481 180 276 1.7E-8 T 15-10-2018 Trad_2167 892bb268b0fcdd754abceebc2e35a2b2 253 SUPERFAMILY SSF51735 1 249 1.27E-72 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_2167 892bb268b0fcdd754abceebc2e35a2b2 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 212 232 3.1E-33 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2167 892bb268b0fcdd754abceebc2e35a2b2 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 3.1E-33 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2167 892bb268b0fcdd754abceebc2e35a2b2 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 3.1E-33 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2167 892bb268b0fcdd754abceebc2e35a2b2 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 3.1E-33 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2167 892bb268b0fcdd754abceebc2e35a2b2 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 3.1E-33 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2167 892bb268b0fcdd754abceebc2e35a2b2 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 3.1E-33 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2167 892bb268b0fcdd754abceebc2e35a2b2 253 Gene3D G3DSA:3.40.50.720 3 251 1.3E-69 T 15-10-2018 Trad_2167 892bb268b0fcdd754abceebc2e35a2b2 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 9.4E-6 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2167 892bb268b0fcdd754abceebc2e35a2b2 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 9.4E-6 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2167 892bb268b0fcdd754abceebc2e35a2b2 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 9.4E-6 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2167 892bb268b0fcdd754abceebc2e35a2b2 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 249 1.2E-53 T 15-10-2018 Trad_0196 28fdcf31151696e07b004cca120cd7a1 441 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 21 434 6.5E-94 T 15-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 Trad_0196 28fdcf31151696e07b004cca120cd7a1 441 PRINTS PR00173 Glutamate-aspartate symporter signature 4 24 2.8E-5 T 15-10-2018 Trad_0196 28fdcf31151696e07b004cca120cd7a1 441 PRINTS PR00173 Glutamate-aspartate symporter signature 252 271 2.8E-5 T 15-10-2018 Trad_0196 28fdcf31151696e07b004cca120cd7a1 441 PRINTS PR00173 Glutamate-aspartate symporter signature 96 121 2.8E-5 T 15-10-2018 Trad_0196 28fdcf31151696e07b004cca120cd7a1 441 PRINTS PR00173 Glutamate-aspartate symporter signature 167 189 2.8E-5 T 15-10-2018 Trad_0196 28fdcf31151696e07b004cca120cd7a1 441 PIRSF PIRSF006066 5 440 1.8E-78 T 15-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 Trad_0196 28fdcf31151696e07b004cca120cd7a1 441 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 11 429 6.0E-90 T 15-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit Trad_2418 1f97d40ad7e17364e482ffe84046e64c 292 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 110 291 1.1E-29 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Trad_2418 1f97d40ad7e17364e482ffe84046e64c 292 SUPERFAMILY SSF161098 87 275 7.98E-31 T 15-10-2018 IPR035906 MetI-like superfamily Trad_2418 1f97d40ad7e17364e482ffe84046e64c 292 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 21 64 6.1E-10 T 15-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain Trad_2418 1f97d40ad7e17364e482ffe84046e64c 292 Gene3D G3DSA:1.10.3720.10 83 289 4.2E-26 T 15-10-2018 IPR035906 MetI-like superfamily Trad_2259 09f2abb78c0e10bbfe323d74c3abe454 275 Gene3D G3DSA:3.30.540.10 1 146 1.3E-39 T 15-10-2018 Trad_2259 09f2abb78c0e10bbfe323d74c3abe454 275 SUPERFAMILY SSF56655 3 261 8.12E-63 T 15-10-2018 Trad_2259 09f2abb78c0e10bbfe323d74c3abe454 275 Pfam PF00459 Inositol monophosphatase family 5 247 6.1E-42 T 15-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Trad_2259 09f2abb78c0e10bbfe323d74c3abe454 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 46 66 7.3E-27 T 15-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Trad_2259 09f2abb78c0e10bbfe323d74c3abe454 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 88 104 7.3E-27 T 15-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Trad_2259 09f2abb78c0e10bbfe323d74c3abe454 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 137 160 7.3E-27 T 15-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Trad_2259 09f2abb78c0e10bbfe323d74c3abe454 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 68 84 7.3E-27 T 15-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Trad_2259 09f2abb78c0e10bbfe323d74c3abe454 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 212 236 7.3E-27 T 15-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Trad_2259 09f2abb78c0e10bbfe323d74c3abe454 275 Gene3D G3DSA:3.40.190.80 148 260 6.1E-16 T 15-10-2018 Trad_2259 09f2abb78c0e10bbfe323d74c3abe454 275 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 88 101 - T 15-10-2018 IPR020583 Inositol monophosphatase, metal-binding site Trad_0865 205062d4d2dd836bb932f33efe34b62c 94 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 15.315 T 15-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Trad_0865 205062d4d2dd836bb932f33efe34b62c 94 Gene3D G3DSA:1.20.58.110 1 94 5.9E-24 T 15-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Trad_0865 205062d4d2dd836bb932f33efe34b62c 94 SUPERFAMILY SSF46992 4 86 3.01E-24 T 15-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Trad_0865 205062d4d2dd836bb932f33efe34b62c 94 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 87 6.2E-18 T 15-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Trad_0865 205062d4d2dd836bb932f33efe34b62c 94 Pfam PF01649 Ribosomal protein S20 2 84 1.4E-20 T 15-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Trad_0865 205062d4d2dd836bb932f33efe34b62c 94 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 11 68 1.0E-10 T 15-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Trad_1946 9ceb4b75b28b4e34e1938b636b98138b 405 Pfam PF00535 Glycosyl transferase family 2 42 212 7.5E-28 T 15-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Trad_1946 9ceb4b75b28b4e34e1938b636b98138b 405 Gene3D G3DSA:3.90.550.10 28 260 2.8E-38 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Trad_1946 9ceb4b75b28b4e34e1938b636b98138b 405 SUPERFAMILY SSF53448 30 287 3.47E-43 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Trad_2957 c248a6bd2575c52ea6bd864b9692c345 446 Pfam PF04539 Sigma-70 region 3 289 367 1.0E-25 T 15-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 Trad_2957 c248a6bd2575c52ea6bd864b9692c345 446 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 34 446 32.618 T 15-10-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 Trad_2957 c248a6bd2575c52ea6bd864b9692c345 446 SUPERFAMILY SSF88946 141 280 6.59E-54 T 15-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Trad_2957 c248a6bd2575c52ea6bd864b9692c345 446 SUPERFAMILY SSF88659 283 359 8.72E-19 T 15-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Trad_2957 c248a6bd2575c52ea6bd864b9692c345 446 Pfam PF04545 Sigma-70, region 4 380 432 1.5E-18 T 15-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 Trad_2957 c248a6bd2575c52ea6bd864b9692c345 446 Gene3D G3DSA:1.10.601.10 179 282 2.2E-52 T 15-10-2018 Trad_2957 c248a6bd2575c52ea6bd864b9692c345 446 Gene3D G3DSA:1.10.601.10 142 178 1.8E-10 T 15-10-2018 Trad_2957 c248a6bd2575c52ea6bd864b9692c345 446 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 206 445 6.1E-117 T 15-10-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 Trad_2957 c248a6bd2575c52ea6bd864b9692c345 446 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 405 431 - T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Trad_2957 c248a6bd2575c52ea6bd864b9692c345 446 SUPERFAMILY SSF88659 342 434 1.07E-27 T 15-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Trad_2957 c248a6bd2575c52ea6bd864b9692c345 446 Pfam PF00140 Sigma-70 factor, region 1.2 144 176 2.7E-15 T 15-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Trad_2957 c248a6bd2575c52ea6bd864b9692c345 446 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 206 432 2.7E-39 T 15-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Trad_2957 c248a6bd2575c52ea6bd864b9692c345 446 Gene3D G3DSA:1.10.10.10 363 443 1.0E-31 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Trad_2957 c248a6bd2575c52ea6bd864b9692c345 446 PRINTS PR00046 Major sigma-70 factor signature 405 420 4.9E-27 T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Trad_2957 c248a6bd2575c52ea6bd864b9692c345 446 PRINTS PR00046 Major sigma-70 factor signature 258 266 4.9E-27 T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Trad_2957 c248a6bd2575c52ea6bd864b9692c345 446 PRINTS PR00046 Major sigma-70 factor signature 234 247 4.9E-27 T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Trad_2957 c248a6bd2575c52ea6bd864b9692c345 446 PRINTS PR00046 Major sigma-70 factor signature 384 396 4.9E-27 T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Trad_2957 c248a6bd2575c52ea6bd864b9692c345 446 PRINTS PR00046 Major sigma-70 factor signature 420 431 4.9E-27 T 15-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Trad_2957 c248a6bd2575c52ea6bd864b9692c345 446 Gene3D G3DSA:1.10.10.10 283 362 3.0E-29 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Trad_2957 c248a6bd2575c52ea6bd864b9692c345 446 Pfam PF04542 Sigma-70 region 2 210 279 5.8E-20 T 15-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Trad_0918 d66416337155521978a5dba1412b5a63 454 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 131 431 1.8E-35 T 15-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Trad_0918 d66416337155521978a5dba1412b5a63 454 Gene3D G3DSA:1.10.1060.10 2 128 1.3E-39 T 15-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Trad_0918 d66416337155521978a5dba1412b5a63 454 Gene3D G3DSA:3.50.50.60 129 254 2.5E-31 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Trad_0918 d66416337155521978a5dba1412b5a63 454 Gene3D G3DSA:3.50.50.60 372 453 2.1E-10 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Trad_0918 d66416337155521978a5dba1412b5a63 454 SUPERFAMILY SSF51971 129 381 1.65E-61 T 15-10-2018 Trad_0918 d66416337155521978a5dba1412b5a63 454 PRINTS PR00419 Adrenodoxin reductase family signature 132 154 3.6E-22 T 15-10-2018 Trad_0918 d66416337155521978a5dba1412b5a63 454 PRINTS PR00419 Adrenodoxin reductase family signature 197 207 3.6E-22 T 15-10-2018 Trad_0918 d66416337155521978a5dba1412b5a63 454 PRINTS PR00419 Adrenodoxin reductase family signature 271 285 3.6E-22 T 15-10-2018 Trad_0918 d66416337155521978a5dba1412b5a63 454 PRINTS PR00419 Adrenodoxin reductase family signature 155 168 3.6E-22 T 15-10-2018 Trad_0918 d66416337155521978a5dba1412b5a63 454 SUPERFAMILY SSF46548 5 141 1.46E-30 T 15-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Trad_0918 d66416337155521978a5dba1412b5a63 454 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 12 116 1.6E-36 T 15-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 Trad_0918 d66416337155521978a5dba1412b5a63 454 Gene3D G3DSA:3.50.50.60 262 371 1.1E-15 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Trad_0103 50d2598b1a03c039216c7ee26843564c 361 Gene3D G3DSA:3.30.470.20 230 347 2.9E-32 T 15-10-2018 Trad_0103 50d2598b1a03c039216c7ee26843564c 361 SUPERFAMILY SSF56059 132 338 1.94E-24 T 15-10-2018 Trad_0103 50d2598b1a03c039216c7ee26843564c 361 Gene3D G3DSA:3.40.50.20 23 138 4.9E-36 T 15-10-2018 Trad_0103 50d2598b1a03c039216c7ee26843564c 361 Pfam PF02655 ATP-grasp domain 135 311 2.2E-12 T 15-10-2018 IPR003806 ATP-grasp fold, DUF201-type GO:0005524|GO:0046872 Trad_0103 50d2598b1a03c039216c7ee26843564c 361 Gene3D G3DSA:3.30.1490.20 139 227 2.0E-5 T 15-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Trad_2941 f90f24697468442116b8834161f3ea9f 253 Pfam PF00480 ROK family 8 161 8.0E-18 T 15-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 Trad_2941 f90f24697468442116b8834161f3ea9f 253 SUPERFAMILY SSF53067 6 248 2.18E-36 T 15-10-2018 Trad_2941 f90f24697468442116b8834161f3ea9f 253 Gene3D G3DSA:3.30.420.40 115 250 4.6E-37 T 15-10-2018 Trad_2941 f90f24697468442116b8834161f3ea9f 253 Gene3D G3DSA:3.30.420.40 3 108 4.0E-23 T 15-10-2018 Trad_1892 368c544585951a60f7cb5970931fcb22 262 TIGRFAM TIGR02303 HpaG-C-term: 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, C-terminal subunit 2 244 8.2E-103 T 15-10-2018 IPR012684 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, C-terminal subunit GO:0008704|GO:0018800|GO:1901023 KEGG: 00350+5.3.3.10+4.1.1.68 Trad_1892 368c544585951a60f7cb5970931fcb22 262 Gene3D G3DSA:3.90.850.10 39 248 7.3E-76 T 15-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 Trad_1892 368c544585951a60f7cb5970931fcb22 262 Gene3D G3DSA:2.30.30.370 1 38 2.9E-17 T 15-10-2018 Trad_1892 368c544585951a60f7cb5970931fcb22 262 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 46 244 1.0E-63 T 15-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 Trad_1892 368c544585951a60f7cb5970931fcb22 262 SUPERFAMILY SSF56529 37 244 5.36E-73 T 15-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 Trad_1327 bfbe5a01dca918099a6282d86f8cd54f 375 Pfam PF01761 3-dehydroquinate synthase 73 324 1.2E-85 T 15-10-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 Trad_1327 bfbe5a01dca918099a6282d86f8cd54f 375 Gene3D G3DSA:3.40.50.1970 3 177 1.9E-60 T 15-10-2018 Trad_1327 bfbe5a01dca918099a6282d86f8cd54f 375 PIRSF PIRSF001455 10 366 1.6E-93 T 15-10-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 Trad_1327 bfbe5a01dca918099a6282d86f8cd54f 375 SUPERFAMILY SSF56796 15 359 2.09E-92 T 15-10-2018 Trad_1327 bfbe5a01dca918099a6282d86f8cd54f 375 Gene3D G3DSA:1.20.1090.10 178 364 1.4E-44 T 15-10-2018 Trad_1327 bfbe5a01dca918099a6282d86f8cd54f 375 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 21 358 4.1E-103 T 15-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 Trad_1327 bfbe5a01dca918099a6282d86f8cd54f 375 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 10 360 58.315 T 15-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 Trad_2836 d70b91d32a8fb3bc7d4e9f05d7977f68 129 SUPERFAMILY SSF46689 18 107 1.38E-5 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Trad_2836 d70b91d32a8fb3bc7d4e9f05d7977f68 129 Pfam PF01527 Transposase 18 95 4.0E-7 T 15-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 Trad_1176 286227660ba894ff2be194c28025e561 406 Pfam PF13437 HlyD family secretion protein 224 272 1.3E-6 T 15-10-2018 Trad_1176 286227660ba894ff2be194c28025e561 406 SUPERFAMILY SSF111369 162 272 9.42E-9 T 15-10-2018 Trad_1176 286227660ba894ff2be194c28025e561 406 SUPERFAMILY SSF111369 51 148 2.35E-6 T 15-10-2018 Trad_1176 286227660ba894ff2be194c28025e561 406 Gene3D G3DSA:2.40.30.170 51 329 1.4E-35 T 15-10-2018 Trad_1176 286227660ba894ff2be194c28025e561 406 Gene3D G3DSA:2.40.420.20 46 385 1.4E-35 T 15-10-2018 Trad_1176 286227660ba894ff2be194c28025e561 406 Gene3D G3DSA:1.10.287.470 96 223 1.4E-35 T 15-10-2018 Trad_1176 286227660ba894ff2be194c28025e561 406 Gene3D G3DSA:2.40.50.100 62 258 1.4E-35 T 15-10-2018 Trad_2603 a2ab1c888a726ffab49121c36776c8a1 269 SUPERFAMILY SSF88697 35 234 1.82E-34 T 15-10-2018 IPR015947 PUA-like superfamily Trad_2603 a2ab1c888a726ffab49121c36776c8a1 269 SMART SM00464 35 236 4.4E-24 T 15-10-2018 IPR003111 Lon, substrate-binding domain Trad_2603 a2ab1c888a726ffab49121c36776c8a1 269 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 35 234 5.3E-22 T 15-10-2018 IPR003111 Lon, substrate-binding domain Trad_2603 a2ab1c888a726ffab49121c36776c8a1 269 Gene3D G3DSA:2.30.130.40 31 136 7.1E-28 T 15-10-2018 Trad_2208 0b5561718f5dc201f45e8a950dc585e7 361 SMART SM01329 12 351 6.8E-184 T 15-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 Trad_2208 0b5561718f5dc201f45e8a950dc585e7 361 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 11 355 47.598 T 15-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 Trad_2208 0b5561718f5dc201f45e8a950dc585e7 361 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 12 353 4.8E-149 T 15-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 Trad_2208 0b5561718f5dc201f45e8a950dc585e7 361 Gene3D G3DSA:3.40.718.10 9 360 2.8E-145 T 15-10-2018 Trad_2208 0b5561718f5dc201f45e8a950dc585e7 361 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 248 267 - T 15-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 Trad_2208 0b5561718f5dc201f45e8a950dc585e7 361 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 12 351 7.5E-127 T 15-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 Trad_2208 0b5561718f5dc201f45e8a950dc585e7 361 SUPERFAMILY SSF53659 11 355 1.02E-119 T 15-10-2018 Trad_0012 e77e60bbd8212a2a8df0ee6af1e02f48 234 Pfam PF01025 GrpE 80 232 1.6E-34 T 15-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Trad_0012 e77e60bbd8212a2a8df0ee6af1e02f48 234 SUPERFAMILY SSF58014 82 176 1.2E-17 T 15-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 Trad_0012 e77e60bbd8212a2a8df0ee6af1e02f48 234 Gene3D G3DSA:3.90.20.20 64 175 5.9E-19 T 15-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 Trad_0012 e77e60bbd8212a2a8df0ee6af1e02f48 234 PRINTS PR00773 GrpE protein signature 212 231 2.7E-20 T 15-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Trad_0012 e77e60bbd8212a2a8df0ee6af1e02f48 234 PRINTS PR00773 GrpE protein signature 104 120 2.7E-20 T 15-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Trad_0012 e77e60bbd8212a2a8df0ee6af1e02f48 234 PRINTS PR00773 GrpE protein signature 184 199 2.7E-20 T 15-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Trad_0012 e77e60bbd8212a2a8df0ee6af1e02f48 234 PRINTS PR00773 GrpE protein signature 132 147 2.7E-20 T 15-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Trad_0012 e77e60bbd8212a2a8df0ee6af1e02f48 234 ProSitePatterns PS01071 grpE protein signature. 187 231 - T 15-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Trad_0012 e77e60bbd8212a2a8df0ee6af1e02f48 234 Gene3D G3DSA:2.30.22.10 176 234 9.0E-17 T 15-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 Trad_0012 e77e60bbd8212a2a8df0ee6af1e02f48 234 SUPERFAMILY SSF51064 180 233 2.75E-13 T 15-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 Trad_0012 e77e60bbd8212a2a8df0ee6af1e02f48 234 Hamap MF_01151 Protein GrpE [grpE]. 3 233 16.386 T 15-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Trad_0447 a5d24aa0540b7409b6bfcd20a3a9019c 325 Pfam PF12127 SigmaW regulon antibacterial 6 316 1.1E-158 T 15-10-2018 IPR022853 Uncharacterised protein family YdfA-immunity Trad_0447 a5d24aa0540b7409b6bfcd20a3a9019c 325 Hamap MF_01562 UPF0365 protein . 1 320 46.215 T 15-10-2018 IPR022853 Uncharacterised protein family YdfA-immunity Trad_0015 95e0da0742c9e8c777b6854a0a99f4a0 209 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 2 209 4.6E-86 T 15-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 Trad_0015 95e0da0742c9e8c777b6854a0a99f4a0 209 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 8 209 39.127 T 15-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 Trad_0015 95e0da0742c9e8c777b6854a0a99f4a0 209 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 31 116 7.6E-26 T 15-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 Trad_0015 95e0da0742c9e8c777b6854a0a99f4a0 209 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 179 192 - T 15-10-2018 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 Trad_0015 95e0da0742c9e8c777b6854a0a99f4a0 209 Gene3D G3DSA:2.30.110.10 1 209 1.1E-84 T 15-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Trad_0015 95e0da0742c9e8c777b6854a0a99f4a0 209 SUPERFAMILY SSF50475 5 209 2.81E-69 T 15-10-2018 Trad_0015 95e0da0742c9e8c777b6854a0a99f4a0 209 PIRSF PIRSF000190 1 209 8.6E-82 T 15-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 Trad_0015 95e0da0742c9e8c777b6854a0a99f4a0 209 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 169 209 5.0E-20 T 15-10-2018 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 Trad_1421 685f85495b1617e92633eb0d6fe9afec 660 Pfam PF00128 Alpha amylase, catalytic domain 218 324 6.0E-8 T 15-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Trad_1421 685f85495b1617e92633eb0d6fe9afec 660 SMART SM00642 204 546 2.5E-4 T 15-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Trad_1421 685f85495b1617e92633eb0d6fe9afec 660 Gene3D G3DSA:1.20.58.280 101 175 2.0E-43 T 15-10-2018 Trad_1421 685f85495b1617e92633eb0d6fe9afec 660 SUPERFAMILY SSF51011 558 637 1.77E-8 T 15-10-2018 Trad_1421 685f85495b1617e92633eb0d6fe9afec 660 Gene3D G3DSA:3.20.20.80 195 557 2.1E-145 T 15-10-2018 Trad_1421 685f85495b1617e92633eb0d6fe9afec 660 SUPERFAMILY SSF51445 194 552 2.25E-76 T 15-10-2018 IPR017853 Glycoside hydrolase superfamily Trad_1421 685f85495b1617e92633eb0d6fe9afec 660 Pfam PF11896 Domain of unknown function (DUF3416) 12 194 2.7E-46 T 15-10-2018 IPR021828 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase, domain N/S GO:0004553 KEGG: 00500+2.4.99.16|MetaCyc: PWY-7900 Trad_1421 685f85495b1617e92633eb0d6fe9afec 660 Gene3D G3DSA:2.60.40.1180 558 655 7.1E-33 T 15-10-2018 IPR013780 Glycosyl hydrolase, all-beta Trad_1421 685f85495b1617e92633eb0d6fe9afec 660 Gene3D G3DSA:2.60.40.10 13 194 2.0E-43 T 15-10-2018 IPR013783 Immunoglobulin-like fold Trad_1421 685f85495b1617e92633eb0d6fe9afec 660 Pfam PF16657 Maltogenic Amylase, C-terminal domain 558 636 2.5E-6 T 15-10-2018 IPR032091 Maltogenic Amylase, C-terminal Trad_1421 685f85495b1617e92633eb0d6fe9afec 660 Hamap MF_02124 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase [glgE]. 9 647 43.863 T 15-10-2018 IPR026585 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase GO:0016757 KEGG: 00500+2.4.99.16|MetaCyc: PWY-7900 Trad_1547 b7d9e01cf7fb2d78377e07a6ede0bc51 280 SUPERFAMILY SSF49313 42 117 5.65E-7 T 15-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 Trad_1547 b7d9e01cf7fb2d78377e07a6ede0bc51 280 Pfam PF05345 Putative Ig domain 67 101 4.2E-6 T 15-10-2018 IPR008009 Putative Ig Trad_1547 b7d9e01cf7fb2d78377e07a6ede0bc51 280 Gene3D G3DSA:2.60.40.10 31 115 3.2E-10 T 15-10-2018 IPR013783 Immunoglobulin-like fold Trad_2884 ba87342375b0d476075b7d712c66afba 400 PRINTS PR01270 Histone deacetylase superfamily signature 255 265 1.7E-19 T 15-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 Trad_2884 ba87342375b0d476075b7d712c66afba 400 PRINTS PR01270 Histone deacetylase superfamily signature 169 184 1.7E-19 T 15-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 Trad_2884 ba87342375b0d476075b7d712c66afba 400 PRINTS PR01270 Histone deacetylase superfamily signature 136 159 1.7E-19 T 15-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 Trad_2884 ba87342375b0d476075b7d712c66afba 400 Gene3D G3DSA:3.40.800.20 10 357 1.8E-103 T 15-10-2018 IPR037138 Histone deacetylase domain superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 Trad_2884 ba87342375b0d476075b7d712c66afba 400 PRINTS PR01271 Histone deacetylase signature 233 251 6.1E-11 T 15-10-2018 IPR003084 Histone deacetylase GO:0004407|GO:0016575 Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862|Reactome: R-HSA-3214815 Trad_2884 ba87342375b0d476075b7d712c66afba 400 PRINTS PR01271 Histone deacetylase signature 64 82 6.1E-11 T 15-10-2018 IPR003084 Histone deacetylase GO:0004407|GO:0016575 Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862|Reactome: R-HSA-3214815 Trad_2884 ba87342375b0d476075b7d712c66afba 400 PRINTS PR01271 Histone deacetylase signature 31 48 6.1E-11 T 15-10-2018 IPR003084 Histone deacetylase GO:0004407|GO:0016575 Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862|Reactome: R-HSA-3214815 Trad_2884 ba87342375b0d476075b7d712c66afba 400 PRINTS PR01271 Histone deacetylase signature 216 229 6.1E-11 T 15-10-2018 IPR003084 Histone deacetylase GO:0004407|GO:0016575 Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862|Reactome: R-HSA-3214815 Trad_2884 ba87342375b0d476075b7d712c66afba 400 Pfam PF00850 Histone deacetylase domain 29 325 7.7E-79 T 15-10-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 Trad_2884 ba87342375b0d476075b7d712c66afba 400 SUPERFAMILY SSF52768 11 344 1.25E-102 T 15-10-2018 IPR023696 Ureohydrolase domain superfamily Trad_2248 12772e0fa33bc2ae73c393cf2b898c4c 299 Pfam PF00494 Squalene/phytoene synthase 26 280 3.5E-70 T 15-10-2018 Trad_2248 12772e0fa33bc2ae73c393cf2b898c4c 299 SUPERFAMILY SSF48576 18 294 1.34E-79 T 15-10-2018 IPR008949 Isoprenoid synthase domain superfamily Trad_2248 12772e0fa33bc2ae73c393cf2b898c4c 299 ProSitePatterns PS01045 Squalene and phytoene synthases signature 2. 170 195 - T 15-10-2018 IPR019845 Squalene/phytoene synthase, conserved site GO:0016765 Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 Trad_2248 12772e0fa33bc2ae73c393cf2b898c4c 299 Gene3D G3DSA:1.10.600.10 10 294 1.7E-80 T 15-10-2018 IPR008949 Isoprenoid synthase domain superfamily Trad_0943 28fc773c9c0836ec3d86a703ac0054cd 505 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 67 417 1.2E-72 T 15-10-2018 IPR000914 Solute-binding protein family 5 domain Trad_0943 28fc773c9c0836ec3d86a703ac0054cd 505 Gene3D G3DSA:3.10.105.10 269 482 2.2E-116 T 15-10-2018 Trad_0943 28fc773c9c0836ec3d86a703ac0054cd 505 Gene3D G3DSA:3.90.76.10 58 169 2.2E-116 T 15-10-2018 Trad_0943 28fc773c9c0836ec3d86a703ac0054cd 505 Gene3D G3DSA:3.40.190.10 36 268 2.2E-116 T 15-10-2018 Trad_0943 28fc773c9c0836ec3d86a703ac0054cd 505 PIRSF PIRSF002741 18 487 2.6E-97 T 15-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Trad_0943 28fc773c9c0836ec3d86a703ac0054cd 505 SUPERFAMILY SSF53850 17 485 5.79E-117 T 15-10-2018 Trad_2947 ba10978e05af554a77cfc536a11c6c2d 269 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 2 76 1.6E-5 T 15-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal Trad_2947 ba10978e05af554a77cfc536a11c6c2d 269 SUPERFAMILY SSF51735 1 262 1.17E-26 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_2947 ba10978e05af554a77cfc536a11c6c2d 269 Gene3D G3DSA:3.40.50.720 1 267 1.3E-52 T 15-10-2018 Trad_0058 10067cd99235da4efd6b69efad505ee0 361 Gene3D G3DSA:1.10.10.2120 27 104 3.3E-55 T 15-10-2018 Trad_0058 10067cd99235da4efd6b69efad505ee0 361 Gene3D G3DSA:3.60.60.10 12 351 3.3E-55 T 15-10-2018 Trad_0058 10067cd99235da4efd6b69efad505ee0 361 Pfam PF03417 Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase 137 352 6.0E-20 T 15-10-2018 IPR005079 Peptidase C45 Trad_2597 5c28c1b36a1fac2448afe8c6f080fd62 354 TIGRFAM TIGR00742 yjbN: tRNA dihydrouridine synthase A 9 322 3.6E-133 T 15-10-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 Trad_2597 5c28c1b36a1fac2448afe8c6f080fd62 354 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 91 109 - T 15-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 Trad_2597 5c28c1b36a1fac2448afe8c6f080fd62 354 Gene3D G3DSA:1.20.120.1460 249 328 1.2E-20 T 15-10-2018 Trad_2597 5c28c1b36a1fac2448afe8c6f080fd62 354 SUPERFAMILY SSF51395 9 320 1.1E-67 T 15-10-2018 Trad_2597 5c28c1b36a1fac2448afe8c6f080fd62 354 PIRSF PIRSF006621 3 326 8.8E-70 T 15-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 Trad_2597 5c28c1b36a1fac2448afe8c6f080fd62 354 Gene3D G3DSA:3.20.20.70 8 248 2.0E-70 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Trad_2597 5c28c1b36a1fac2448afe8c6f080fd62 354 Pfam PF01207 Dihydrouridine synthase (Dus) 12 310 4.0E-76 T 15-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 Trad_2597 5c28c1b36a1fac2448afe8c6f080fd62 354 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 4 324 50.247 T 15-10-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 Trad_2973 a0eb6373f03a86c3c54caca69efa97fd 106 Gene3D G3DSA:3.40.250.10 7 99 1.3E-30 T 15-10-2018 IPR036873 Rhodanese-like domain superfamily Trad_2973 a0eb6373f03a86c3c54caca69efa97fd 106 Pfam PF00581 Rhodanese-like domain 11 97 1.1E-12 T 15-10-2018 IPR001763 Rhodanese-like domain Trad_2973 a0eb6373f03a86c3c54caca69efa97fd 106 SUPERFAMILY SSF52821 4 105 5.89E-35 T 15-10-2018 IPR036873 Rhodanese-like domain superfamily Trad_2973 a0eb6373f03a86c3c54caca69efa97fd 106 SMART SM00450 9 102 4.6E-25 T 15-10-2018 IPR001763 Rhodanese-like domain Trad_2358 5215bdb83bb39cdd130e60ccd310ddd3 370 Pfam PF02653 Branched-chain amino acid transport system / permease component 53 345 1.6E-42 T 15-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Trad_1979 ce5b7a73a2e28c9e8ebef69284f6a118 471 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 194 433 2.4E-67 T 15-10-2018 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 Trad_1979 ce5b7a73a2e28c9e8ebef69284f6a118 471 PRINTS PR00732 Glycosyl hydrolase family 4 signature 110 130 6.4E-33 T 15-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 Trad_1979 ce5b7a73a2e28c9e8ebef69284f6a118 471 PRINTS PR00732 Glycosyl hydrolase family 4 signature 190 202 6.4E-33 T 15-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 Trad_1979 ce5b7a73a2e28c9e8ebef69284f6a118 471 PRINTS PR00732 Glycosyl hydrolase family 4 signature 72 88 6.4E-33 T 15-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 Trad_1979 ce5b7a73a2e28c9e8ebef69284f6a118 471 PRINTS PR00732 Glycosyl hydrolase family 4 signature 3 18 6.4E-33 T 15-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 Trad_1979 ce5b7a73a2e28c9e8ebef69284f6a118 471 PRINTS PR00732 Glycosyl hydrolase family 4 signature 164 175 6.4E-33 T 15-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 Trad_1979 ce5b7a73a2e28c9e8ebef69284f6a118 471 PRINTS PR00732 Glycosyl hydrolase family 4 signature 94 107 6.4E-33 T 15-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 Trad_1979 ce5b7a73a2e28c9e8ebef69284f6a118 471 PRINTS PR00732 Glycosyl hydrolase family 4 signature 139 156 6.4E-33 T 15-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 Trad_1979 ce5b7a73a2e28c9e8ebef69284f6a118 471 SUPERFAMILY SSF51735 2 167 8.28E-53 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_1979 ce5b7a73a2e28c9e8ebef69284f6a118 471 Pfam PF02056 Family 4 glycosyl hydrolase 3 184 7.9E-58 T 15-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 Trad_1979 ce5b7a73a2e28c9e8ebef69284f6a118 471 SUPERFAMILY SSF56327 168 461 4.75E-70 T 15-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 Trad_2492 7b0fac7373ffe937ba545ac27cb35f80 888 SUPERFAMILY SSF82171 301 554 1.26E-16 T 15-10-2018 Trad_2492 7b0fac7373ffe937ba545ac27cb35f80 888 Gene3D G3DSA:2.120.10.30 277 485 2.0E-8 T 15-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like Trad_2688 b70fbe96db10a3a136ff1e77f37cfa6e 395 Pfam PF07690 Major Facilitator Superfamily 12 237 1.7E-15 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Trad_2688 b70fbe96db10a3a136ff1e77f37cfa6e 395 Gene3D G3DSA:1.20.1250.20 4 183 1.1E-19 T 15-10-2018 Trad_2688 b70fbe96db10a3a136ff1e77f37cfa6e 395 Gene3D G3DSA:1.20.1250.20 195 384 8.0E-32 T 15-10-2018 Trad_2688 b70fbe96db10a3a136ff1e77f37cfa6e 395 SUPERFAMILY SSF103473 4 387 2.09E-44 T 15-10-2018 IPR036259 MFS transporter superfamily Trad_0355 a9d680c344dd88368f1ec2aa592e98ad 119 Gene3D G3DSA:1.20.1300.10 2 111 1.5E-13 T 15-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Trad_0355 a9d680c344dd88368f1ec2aa592e98ad 119 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 2 101 6.2E-16 T 15-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Trad_0355 a9d680c344dd88368f1ec2aa592e98ad 119 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 2 104 1.6E-18 T 15-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Trad_0355 a9d680c344dd88368f1ec2aa592e98ad 119 SUPERFAMILY SSF81343 2 107 1.96E-18 T 15-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Trad_0355 a9d680c344dd88368f1ec2aa592e98ad 119 PIRSF PIRSF000178 2 111 5.5E-8 T 15-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Trad_0510 6b2c84bdebd17a92cf71b8a449e84291 326 SUPERFAMILY SSF48208 27 200 2.93E-7 T 15-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 Trad_0148 0698b575444e3504a4f6c402c113e8c2 211 SUPERFAMILY SSF46785 10 117 4.81E-7 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Trad_0148 0698b575444e3504a4f6c402c113e8c2 211 Gene3D G3DSA:1.10.10.10 1 86 2.3E-8 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Trad_2571 7071a36f367204b96f0fb9cc97378805 262 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 149 177 - T 15-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Trad_2571 7071a36f367204b96f0fb9cc97378805 262 Gene3D G3DSA:3.40.50.720 2 260 6.4E-77 T 15-10-2018 Trad_2571 7071a36f367204b96f0fb9cc97378805 262 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 187 0.0072 T 15-10-2018 Trad_2571 7071a36f367204b96f0fb9cc97378805 262 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 256 6.4E-63 T 15-10-2018 Trad_2571 7071a36f367204b96f0fb9cc97378805 262 SUPERFAMILY SSF51735 7 256 8.44E-74 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_2571 7071a36f367204b96f0fb9cc97378805 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 142 150 2.2E-10 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2571 7071a36f367204b96f0fb9cc97378805 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 162 181 2.2E-10 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2571 7071a36f367204b96f0fb9cc97378805 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 2.2E-10 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2571 7071a36f367204b96f0fb9cc97378805 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 219 239 4.8E-35 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2571 7071a36f367204b96f0fb9cc97378805 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 4.8E-35 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2571 7071a36f367204b96f0fb9cc97378805 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 199 4.8E-35 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2571 7071a36f367204b96f0fb9cc97378805 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 4.8E-35 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2571 7071a36f367204b96f0fb9cc97378805 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 136 152 4.8E-35 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2571 7071a36f367204b96f0fb9cc97378805 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 4.8E-35 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_1227 197f58a8aba46b3f955e49bfbea9647b 494 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 11 486 1.1E-171 T 15-10-2018 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00640+1.2.1.27|MetaCyc: PWY-5642|Reactome: R-HSA-70895 Trad_1227 197f58a8aba46b3f955e49bfbea9647b 494 Pfam PF00171 Aldehyde dehydrogenase family 17 482 1.6E-141 T 15-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Trad_1227 197f58a8aba46b3f955e49bfbea9647b 494 SUPERFAMILY SSF53720 8 488 6.54E-144 T 15-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Trad_1227 197f58a8aba46b3f955e49bfbea9647b 494 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 279 290 - T 15-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 Trad_1227 197f58a8aba46b3f955e49bfbea9647b 494 Gene3D G3DSA:3.40.605.10 28 463 9.3E-145 T 15-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Trad_1227 197f58a8aba46b3f955e49bfbea9647b 494 Gene3D G3DSA:3.40.309.10 254 455 9.3E-145 T 15-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Trad_1247 de07568b6e56aa2926056d8579cd088c 260 SUPERFAMILY SSF52540 12 241 4.67E-59 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_1247 de07568b6e56aa2926056d8579cd088c 260 SMART SM00382 38 228 2.1E-14 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_1247 de07568b6e56aa2926056d8579cd088c 260 Pfam PF00005 ABC transporter 30 180 4.5E-29 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Trad_1247 de07568b6e56aa2926056d8579cd088c 260 Gene3D G3DSA:3.40.50.300 2 249 1.0E-58 T 15-10-2018 Trad_1247 de07568b6e56aa2926056d8579cd088c 260 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Trad_2473 2b1f0ab6b6b3b5f52dac073bf8f5e45a 168 SUPERFAMILY SSF141259 7 69 5.49E-9 T 15-10-2018 IPR036101 CarD-like/TRCF domain superfamily Trad_2473 2b1f0ab6b6b3b5f52dac073bf8f5e45a 168 SMART SM01058 7 117 5.4E-15 T 15-10-2018 IPR003711 CarD-like/TRCF domain Trad_2473 2b1f0ab6b6b3b5f52dac073bf8f5e45a 168 Pfam PF02559 CarD-like/TRCF domain 8 112 3.4E-11 T 15-10-2018 IPR003711 CarD-like/TRCF domain Trad_2473 2b1f0ab6b6b3b5f52dac073bf8f5e45a 168 Gene3D G3DSA:1.20.58.1290 66 162 8.3E-34 T 15-10-2018 Trad_2473 2b1f0ab6b6b3b5f52dac073bf8f5e45a 168 Gene3D G3DSA:2.30.30.840 4 64 4.8E-14 T 15-10-2018 Trad_2590 d6831426e940b2764efc348baaeab45f 391 Gene3D G3DSA:3.40.50.150 188 382 2.8E-95 T 15-10-2018 Trad_2590 d6831426e940b2764efc348baaeab45f 391 Gene3D G3DSA:3.30.2130.30 26 270 2.8E-95 T 15-10-2018 Trad_2590 d6831426e940b2764efc348baaeab45f 391 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 214 225 - T 15-10-2018 IPR000241 Putative RNA methylase domain Trad_2590 d6831426e940b2764efc348baaeab45f 391 Pfam PF01170 Putative RNA methylase family UPF0020 181 358 2.1E-37 T 15-10-2018 IPR000241 Putative RNA methylase domain Trad_2590 d6831426e940b2764efc348baaeab45f 391 SUPERFAMILY SSF53335 159 360 1.1E-34 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Trad_2979 f6700aed328b264ab4d012dc71fe0da9 174 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 2 152 28.909 T 15-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Trad_2979 f6700aed328b264ab4d012dc71fe0da9 174 SUPERFAMILY SSF54862 26 157 2.05E-27 T 15-10-2018 Trad_2979 f6700aed328b264ab4d012dc71fe0da9 174 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 9 136 2.8E-48 T 15-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Trad_2979 f6700aed328b264ab4d012dc71fe0da9 174 Gene3D G3DSA:3.30.70.3270 26 174 4.1E-55 T 15-10-2018 Trad_2979 f6700aed328b264ab4d012dc71fe0da9 174 Pfam PF12838 4Fe-4S dicluster domain 52 112 3.6E-13 T 15-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Trad_2979 f6700aed328b264ab4d012dc71fe0da9 174 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 98 109 - T 15-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Trad_0320 5f1df4e3a4bcaccf04c8576727abd1ca 146 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 7 126 2.1E-28 T 15-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 Trad_0320 5f1df4e3a4bcaccf04c8576727abd1ca 146 Gene3D G3DSA:3.40.50.300 3 145 3.6E-31 T 15-10-2018 Trad_0320 5f1df4e3a4bcaccf04c8576727abd1ca 146 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 6 138 2.2E-25 T 15-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 Trad_0320 5f1df4e3a4bcaccf04c8576727abd1ca 146 SUPERFAMILY SSF52540 21 123 1.72E-15 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_0645 34aa2952c87f02307e54b0dbcbf2b592 373 SMART SM00937 59 174 4.8E-56 T 15-10-2018 IPR005139 Peptide chain release factor GO:0006415 Trad_0645 34aa2952c87f02307e54b0dbcbf2b592 373 Gene3D G3DSA:3.30.160.20 206 295 1.4E-88 T 15-10-2018 Trad_0645 34aa2952c87f02307e54b0dbcbf2b592 373 Gene3D G3DSA:1.20.58.410 2 98 4.1E-8 T 15-10-2018 Trad_0645 34aa2952c87f02307e54b0dbcbf2b592 373 Pfam PF00472 RF-1 domain 207 319 3.5E-36 T 15-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 Trad_0645 34aa2952c87f02307e54b0dbcbf2b592 373 Gene3D G3DSA:3.30.70.1660 107 340 1.4E-88 T 15-10-2018 Trad_0645 34aa2952c87f02307e54b0dbcbf2b592 373 SUPERFAMILY SSF75620 8 351 1.29E-123 T 15-10-2018 Trad_0645 34aa2952c87f02307e54b0dbcbf2b592 373 Pfam PF03462 PCRF domain 9 199 6.7E-71 T 15-10-2018 IPR005139 Peptide chain release factor GO:0006415 Trad_0645 34aa2952c87f02307e54b0dbcbf2b592 373 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 1 355 37.229 T 15-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 Trad_0645 34aa2952c87f02307e54b0dbcbf2b592 373 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 223 239 - T 15-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 Trad_0645 34aa2952c87f02307e54b0dbcbf2b592 373 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 355 5.9E-146 T 15-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 Trad_0787 2a586d0dfcfce3826c45a2f73cc64419 202 SUPERFAMILY SSF53335 18 166 3.24E-14 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Trad_0787 2a586d0dfcfce3826c45a2f73cc64419 202 Pfam PF08241 Methyltransferase domain 61 140 9.3E-5 T 15-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 Trad_0787 2a586d0dfcfce3826c45a2f73cc64419 202 Gene3D G3DSA:3.40.50.150 26 180 3.5E-13 T 15-10-2018 Trad_0656 18bf8794ca8b6860381381f1a5e64700 312 Pfam PF00892 EamA-like transporter family 169 303 1.0E-13 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Trad_0656 18bf8794ca8b6860381381f1a5e64700 312 Pfam PF00892 EamA-like transporter family 38 154 1.3E-10 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Trad_0656 18bf8794ca8b6860381381f1a5e64700 312 SUPERFAMILY SSF103481 207 305 1.57E-7 T 15-10-2018 Trad_0656 18bf8794ca8b6860381381f1a5e64700 312 SUPERFAMILY SSF103481 59 158 2.09E-13 T 15-10-2018 Trad_0039 1db10f821a4061021bfa7fc500b5f415 216 Pfam PF01694 Rhomboid family 59 211 1.1E-37 T 15-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 Trad_0039 1db10f821a4061021bfa7fc500b5f415 216 SUPERFAMILY SSF144091 10 212 1.7E-41 T 15-10-2018 Trad_0039 1db10f821a4061021bfa7fc500b5f415 216 Gene3D G3DSA:1.20.1540.10 10 214 2.9E-32 T 15-10-2018 IPR035952 Rhomboid-like superfamily Trad_0133 f706c76eaf11ef1352b2babac71cce9b 483 PIRSF PIRSF006247 2 475 1.6E-154 T 15-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 Trad_0133 f706c76eaf11ef1352b2babac71cce9b 483 Pfam PF02386 Cation transport protein 91 467 7.5E-53 T 15-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 Trad_0512 17ddbfd81d6301d025cc9bca06481a7f 681 SUPERFAMILY SSF49299 559 680 5.23E-9 T 15-10-2018 IPR035986 PKD domain superfamily Trad_0512 17ddbfd81d6301d025cc9bca06481a7f 681 SMART SM00089 507 592 7.4E-4 T 15-10-2018 IPR022409 PKD/Chitinase domain Trad_0512 17ddbfd81d6301d025cc9bca06481a7f 681 SMART SM00089 595 680 1.5 T 15-10-2018 IPR022409 PKD/Chitinase domain Trad_0512 17ddbfd81d6301d025cc9bca06481a7f 681 SUPERFAMILY SSF49299 480 592 9.81E-8 T 15-10-2018 IPR035986 PKD domain superfamily Trad_0512 17ddbfd81d6301d025cc9bca06481a7f 681 PRINTS PR01217 Proline rich extensin signature 295 307 6.6E-9 T 15-10-2018 Trad_0512 17ddbfd81d6301d025cc9bca06481a7f 681 PRINTS PR01217 Proline rich extensin signature 275 291 6.6E-9 T 15-10-2018 Trad_0512 17ddbfd81d6301d025cc9bca06481a7f 681 PRINTS PR01217 Proline rich extensin signature 328 344 6.6E-9 T 15-10-2018 Trad_0512 17ddbfd81d6301d025cc9bca06481a7f 681 PRINTS PR01217 Proline rich extensin signature 307 328 6.6E-9 T 15-10-2018 Trad_0512 17ddbfd81d6301d025cc9bca06481a7f 681 Gene3D G3DSA:2.60.40.10 594 681 1.2E-16 T 15-10-2018 IPR013783 Immunoglobulin-like fold Trad_0512 17ddbfd81d6301d025cc9bca06481a7f 681 Gene3D G3DSA:2.60.40.10 503 593 4.2E-13 T 15-10-2018 IPR013783 Immunoglobulin-like fold Trad_1842 3dca68d70eb30cdf393449cf76672a79 360 Gene3D G3DSA:3.30.360.10 126 340 1.1E-41 T 15-10-2018 Trad_1842 3dca68d70eb30cdf393449cf76672a79 360 Gene3D G3DSA:3.40.50.720 1 125 2.3E-33 T 15-10-2018 Trad_1842 3dca68d70eb30cdf393449cf76672a79 360 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 135 238 9.8E-11 T 15-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 Trad_1842 3dca68d70eb30cdf393449cf76672a79 360 SUPERFAMILY SSF51735 3 189 2.1E-39 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_1842 3dca68d70eb30cdf393449cf76672a79 360 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 4 120 1.5E-24 T 15-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 Trad_2375 4d5acf70fa58116f440deee9a8b42a84 106 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 2 99 1.0E-27 T 15-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family Trad_2375 4d5acf70fa58116f440deee9a8b42a84 106 Gene3D G3DSA:3.30.1310.10 3 106 3.1E-37 T 15-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily Trad_2375 4d5acf70fa58116f440deee9a8b42a84 106 Pfam PF02575 YbaB/EbfC DNA-binding family 7 96 8.4E-35 T 15-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family Trad_2375 4d5acf70fa58116f440deee9a8b42a84 106 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 1 95 22.473 T 15-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family Trad_2375 4d5acf70fa58116f440deee9a8b42a84 106 SUPERFAMILY SSF82607 3 95 3.66E-30 T 15-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily Trad_2375 4d5acf70fa58116f440deee9a8b42a84 106 PIRSF PIRSF004555 1 106 1.5E-37 T 15-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family Trad_1512 20e3d601ee9b1f68fac8a89967dda9fc 264 TIGRFAM TIGR02964 xanthine_xdhC: xanthine dehydrogenase accessory protein XdhC 18 254 4.5E-72 T 15-10-2018 IPR014308 Xanthine dehydrogenase accessory protein XdhC Trad_1512 20e3d601ee9b1f68fac8a89967dda9fc 264 Gene3D G3DSA:3.40.50.720 109 257 1.9E-29 T 15-10-2018 Trad_1512 20e3d601ee9b1f68fac8a89967dda9fc 264 Pfam PF13478 XdhC Rossmann domain 109 253 2.4E-32 T 15-10-2018 IPR027051 XdhC Rossmann domain Trad_1512 20e3d601ee9b1f68fac8a89967dda9fc 264 Pfam PF02625 XdhC and CoxI family 11 69 7.9E-19 T 15-10-2018 IPR003777 XdhC- CoxI Trad_2734 c0b1ef2ed2895ce6f8c1e50749eb3063 569 Pfam PF03793 PASTA domain 418 474 9.7E-5 T 15-10-2018 IPR005543 PASTA domain Trad_2734 c0b1ef2ed2895ce6f8c1e50749eb3063 569 Pfam PF03793 PASTA domain 274 333 1.5E-6 T 15-10-2018 IPR005543 PASTA domain Trad_2734 c0b1ef2ed2895ce6f8c1e50749eb3063 569 Pfam PF03793 PASTA domain 198 263 1.4E-5 T 15-10-2018 IPR005543 PASTA domain Trad_2734 c0b1ef2ed2895ce6f8c1e50749eb3063 569 Gene3D G3DSA:3.30.10.20 194 264 3.4E-9 T 15-10-2018 Trad_2734 c0b1ef2ed2895ce6f8c1e50749eb3063 569 SMART SM00740 268 334 0.0076 T 15-10-2018 IPR005543 PASTA domain Trad_2734 c0b1ef2ed2895ce6f8c1e50749eb3063 569 SMART SM00740 411 475 0.45 T 15-10-2018 IPR005543 PASTA domain Trad_2734 c0b1ef2ed2895ce6f8c1e50749eb3063 569 SMART SM00740 337 405 0.14 T 15-10-2018 IPR005543 PASTA domain Trad_2734 c0b1ef2ed2895ce6f8c1e50749eb3063 569 SMART SM00740 194 265 0.82 T 15-10-2018 IPR005543 PASTA domain Trad_2734 c0b1ef2ed2895ce6f8c1e50749eb3063 569 Gene3D G3DSA:3.30.10.20 269 335 4.0E-11 T 15-10-2018 Trad_1952 304b45012d36c7edb3ef54d851230244 141 SUPERFAMILY SSF82153 10 141 3.14E-17 T 15-10-2018 IPR036378 FAS1 domain superfamily Trad_1952 304b45012d36c7edb3ef54d851230244 141 SMART SM00554 37 141 6.8E-8 T 15-10-2018 IPR000782 FAS1 domain Trad_1952 304b45012d36c7edb3ef54d851230244 141 Pfam PF02469 Fasciclin domain 10 140 1.2E-15 T 15-10-2018 IPR000782 FAS1 domain Trad_1952 304b45012d36c7edb3ef54d851230244 141 Gene3D G3DSA:2.30.180.10 2 141 2.4E-18 T 15-10-2018 IPR036378 FAS1 domain superfamily Trad_2888 4d8ed0daddb7c45a512378f83f852849 346 Gene3D G3DSA:3.90.180.10 16 336 1.3E-77 T 15-10-2018 Trad_2888 4d8ed0daddb7c45a512378f83f852849 346 SMART SM00829 8 343 1.2E-4 T 15-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Trad_2888 4d8ed0daddb7c45a512378f83f852849 346 SUPERFAMILY SSF50129 3 175 1.3E-39 T 15-10-2018 IPR011032 GroES-like superfamily Trad_2888 4d8ed0daddb7c45a512378f83f852849 346 SUPERFAMILY SSF51735 142 308 1.23E-31 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_2888 4d8ed0daddb7c45a512378f83f852849 346 Pfam PF00107 Zinc-binding dehydrogenase 178 307 6.5E-19 T 15-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Trad_2888 4d8ed0daddb7c45a512378f83f852849 346 Gene3D G3DSA:3.40.50.720 156 291 1.3E-77 T 15-10-2018 Trad_2888 4d8ed0daddb7c45a512378f83f852849 346 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 62 76 - T 15-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 Trad_2888 4d8ed0daddb7c45a512378f83f852849 346 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 135 2.4E-25 T 15-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Trad_1593 711713f40f79cdb5a55303a86d9d28eb 221 Pfam PF09557 Domain of unknown function (DUF2382) 94 204 8.6E-24 T 15-10-2018 IPR019060 Domain of unknown function DUF2382 Trad_0362 4ef13bd770cb554e6ede2f89a1f107f4 182 Pfam PF00196 Bacterial regulatory proteins, luxR family 106 161 2.5E-9 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Trad_0362 4ef13bd770cb554e6ede2f89a1f107f4 182 Gene3D G3DSA:1.10.10.10 22 168 2.2E-15 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Trad_0362 4ef13bd770cb554e6ede2f89a1f107f4 182 SUPERFAMILY SSF46894 94 164 1.36E-13 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Trad_0362 4ef13bd770cb554e6ede2f89a1f107f4 182 SMART SM00421 105 162 4.0E-6 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Trad_1446 03c0f304fac617375d2ca0d338cf108d 271 Pfam PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) 23 255 6.5E-48 T 15-10-2018 IPR019108 Cytochrome c oxidase caa3-type, assembly factor CtaG-related Trad_1422 5e489ad7192e81362179c7ed20639521 397 SUPERFAMILY SSF50129 49 203 1.07E-33 T 15-10-2018 IPR011032 GroES-like superfamily Trad_1422 5e489ad7192e81362179c7ed20639521 397 Pfam PF13602 Zinc-binding dehydrogenase 240 366 4.3E-20 T 15-10-2018 Trad_1422 5e489ad7192e81362179c7ed20639521 397 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 80 145 3.4E-5 T 15-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Trad_1422 5e489ad7192e81362179c7ed20639521 397 Gene3D G3DSA:3.40.50.720 181 317 1.1E-84 T 15-10-2018 Trad_1422 5e489ad7192e81362179c7ed20639521 397 SUPERFAMILY SSF51735 170 340 2.25E-32 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_1422 5e489ad7192e81362179c7ed20639521 397 Gene3D G3DSA:3.90.180.10 60 365 1.1E-84 T 15-10-2018 Trad_1422 5e489ad7192e81362179c7ed20639521 397 SMART SM00829 62 366 3.4E-20 T 15-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Trad_0423 c50c7644c82fa4e42a78266f868efc61 102 Gene3D G3DSA:3.30.2310.20 1 100 9.2E-16 T 15-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily Trad_0423 c50c7644c82fa4e42a78266f868efc61 102 SUPERFAMILY SSF143011 3 85 1.44E-11 T 15-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily Trad_0423 c50c7644c82fa4e42a78266f868efc61 102 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 5 85 4.9E-9 T 15-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family Trad_2824 af4b206ed3fb2e9bca9cbd86da716d0b 254 Gene3D G3DSA:3.30.1600.10 40 171 5.2E-76 T 15-10-2018 IPR026591 Sirtuin, catalytic core small domain superfamily Trad_2824 af4b206ed3fb2e9bca9cbd86da716d0b 254 Hamap MF_01121 NAD-dependent protein deacylase [cobB]. 24 251 55.041 T 15-10-2018 IPR027546 Sirtuin, class III GO:0036054|GO:0036055|GO:0070403 Reactome: R-HSA-2151201 Trad_2824 af4b206ed3fb2e9bca9cbd86da716d0b 254 Gene3D G3DSA:3.40.50.1220 22 239 5.2E-76 T 15-10-2018 Trad_2824 af4b206ed3fb2e9bca9cbd86da716d0b 254 SUPERFAMILY SSF52467 11 249 1.85E-75 T 15-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily Trad_2824 af4b206ed3fb2e9bca9cbd86da716d0b 254 Pfam PF02146 Sir2 family 31 201 6.8E-45 T 15-10-2018 IPR003000 Sirtuin family GO:0070403 Trad_2909 84e36aca6f8bb60d2aaf3f4f709fcb4e 143 Gene3D G3DSA:1.10.760.10 15 141 5.4E-8 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Trad_2909 84e36aca6f8bb60d2aaf3f4f709fcb4e 143 SUPERFAMILY SSF48695 38 79 1.35E-5 T 15-10-2018 IPR036280 Multiheme cytochrome superfamily Trad_2909 84e36aca6f8bb60d2aaf3f4f709fcb4e 143 SUPERFAMILY SSF46626 13 141 3.1E-9 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Trad_0723 561b2e41a0dfc5ebb025b5122c55208c 332 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 29 211 1.4E-5 T 15-10-2018 Trad_0723 561b2e41a0dfc5ebb025b5122c55208c 332 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 177 196 9.4E-14 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_0723 561b2e41a0dfc5ebb025b5122c55208c 332 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 105 116 9.4E-14 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_0723 561b2e41a0dfc5ebb025b5122c55208c 332 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 165 9.4E-14 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_0723 561b2e41a0dfc5ebb025b5122c55208c 332 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 167 1.3E-28 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_0723 561b2e41a0dfc5ebb025b5122c55208c 332 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 105 116 1.3E-28 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_0723 561b2e41a0dfc5ebb025b5122c55208c 332 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 30 47 1.3E-28 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_0723 561b2e41a0dfc5ebb025b5122c55208c 332 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 198 215 1.3E-28 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_0723 561b2e41a0dfc5ebb025b5122c55208c 332 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 196 1.3E-28 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_0723 561b2e41a0dfc5ebb025b5122c55208c 332 Gene3D G3DSA:3.40.50.720 13 292 1.6E-75 T 15-10-2018 Trad_0723 561b2e41a0dfc5ebb025b5122c55208c 332 Pfam PF00106 short chain dehydrogenase 29 217 3.1E-56 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_0723 561b2e41a0dfc5ebb025b5122c55208c 332 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 164 192 - T 15-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Trad_0723 561b2e41a0dfc5ebb025b5122c55208c 332 SUPERFAMILY SSF51735 25 286 5.46E-68 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_1620 bb531a2283d0b7dcfef011509bbc20be 290 SUPERFAMILY SSF56112 8 265 6.45E-25 T 15-10-2018 IPR011009 Protein kinase-like domain superfamily Trad_1620 bb531a2283d0b7dcfef011509bbc20be 290 Gene3D G3DSA:3.90.1200.10 103 283 1.4E-13 T 15-10-2018 Trad_1620 bb531a2283d0b7dcfef011509bbc20be 290 Pfam PF01636 Phosphotransferase enzyme family 32 243 7.7E-17 T 15-10-2018 IPR002575 Aminoglycoside phosphotransferase Trad_0549 e58e116b9169127dc06d1dfe31090e48 166 SUPERFAMILY SSF47781 100 162 4.22E-19 T 15-10-2018 IPR010994 RuvA domain 2-like Trad_0549 e58e116b9169127dc06d1dfe31090e48 166 SUPERFAMILY SSF142984 45 76 6.8E-5 T 15-10-2018 Trad_0549 e58e116b9169127dc06d1dfe31090e48 166 Gene3D G3DSA:1.10.150.320 94 166 2.4E-25 T 15-10-2018 Trad_0549 e58e116b9169127dc06d1dfe31090e48 166 Pfam PF12836 Helix-hairpin-helix motif 107 164 2.7E-19 T 15-10-2018 Trad_0549 e58e116b9169127dc06d1dfe31090e48 166 Pfam PF10531 SLBB domain 45 95 4.4E-10 T 15-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Trad_1262 bfb53e16f8ac9963452d0780e5c65495 306 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 3 286 1.4E-56 T 15-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 Trad_1262 bfb53e16f8ac9963452d0780e5c65495 306 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 2 285 2.1E-44 T 15-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 Trad_1262 bfb53e16f8ac9963452d0780e5c65495 306 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 1 292 15.008 T 15-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 Trad_1217 749c6348c24af56dbb6ac92e0442b895 116 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 15-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_1217 749c6348c24af56dbb6ac92e0442b895 116 Gene3D G3DSA:1.10.720.90 2 56 2.3E-22 T 15-10-2018 Trad_1217 749c6348c24af56dbb6ac92e0442b895 116 Gene3D G3DSA:1.10.1900.20 57 116 1.1E-27 T 15-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_1217 749c6348c24af56dbb6ac92e0442b895 116 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 70 2.0E-8 T 15-10-2018 Trad_1217 749c6348c24af56dbb6ac92e0442b895 116 SUPERFAMILY SSF74731 2 115 5.36E-44 T 15-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_1217 749c6348c24af56dbb6ac92e0442b895 116 Pfam PF00453 Ribosomal protein L20 3 109 1.2E-44 T 15-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_1217 749c6348c24af56dbb6ac92e0442b895 116 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 9.0E-49 T 15-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_1217 749c6348c24af56dbb6ac92e0442b895 116 PRINTS PR00062 Ribosomal protein L20 signature 42 71 2.5E-38 T 15-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_1217 749c6348c24af56dbb6ac92e0442b895 116 PRINTS PR00062 Ribosomal protein L20 signature 12 41 2.5E-38 T 15-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_1217 749c6348c24af56dbb6ac92e0442b895 116 PRINTS PR00062 Ribosomal protein L20 signature 75 101 2.5E-38 T 15-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_1217 749c6348c24af56dbb6ac92e0442b895 116 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 28.471 T 15-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_0323 37a80675e14c3c22cfe824d1c0450eff 206 SUPERFAMILY SSF52540 5 191 7.2E-59 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_0323 37a80675e14c3c22cfe824d1c0450eff 206 Hamap MF_00328 Guanylate kinase [gmk]. 5 188 35.069 T 15-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 Trad_0323 37a80675e14c3c22cfe824d1c0450eff 206 Pfam PF00625 Guanylate kinase 10 186 2.8E-45 T 15-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit Trad_0323 37a80675e14c3c22cfe824d1c0450eff 206 SMART SM00072 6 188 3.6E-62 T 15-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit Trad_0323 37a80675e14c3c22cfe824d1c0450eff 206 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 8 185 2.3E-67 T 15-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 Trad_0323 37a80675e14c3c22cfe824d1c0450eff 206 Gene3D G3DSA:3.40.50.300 11 184 3.1E-62 T 15-10-2018 Trad_0323 37a80675e14c3c22cfe824d1c0450eff 206 Gene3D G3DSA:3.30.63.10 38 97 3.1E-62 T 15-10-2018 Trad_2730 00aca636925ca69869f575fcd042618b 349 SUPERFAMILY SSF102114 94 311 1.57E-17 T 15-10-2018 Trad_2730 00aca636925ca69869f575fcd042618b 349 Gene3D G3DSA:1.10.150.530 12 60 2.9E-9 T 15-10-2018 Trad_2730 00aca636925ca69869f575fcd042618b 349 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 20 337 4.1E-101 T 15-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 Trad_2730 00aca636925ca69869f575fcd042618b 349 Gene3D G3DSA:3.20.20.70 65 327 6.7E-91 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Trad_2730 00aca636925ca69869f575fcd042618b 349 Pfam PF04055 Radical SAM superfamily 104 269 1.7E-15 T 15-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Trad_2730 00aca636925ca69869f575fcd042618b 349 PIRSF PIRSF006004 6 344 2.4E-118 T 15-10-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 Trad_2730 00aca636925ca69869f575fcd042618b 349 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 4 342 63.041 T 15-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 Trad_0101 e84ba07d90a960ab2ba28ae2200565f8 337 SUPERFAMILY SSF55729 191 318 1.05E-13 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase Trad_0101 e84ba07d90a960ab2ba28ae2200565f8 337 SUPERFAMILY SSF55729 8 147 6.69E-16 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase Trad_0101 e84ba07d90a960ab2ba28ae2200565f8 337 Pfam PF00583 Acetyltransferase (GNAT) family 35 123 8.1E-8 T 15-10-2018 IPR000182 GNAT domain Trad_0101 e84ba07d90a960ab2ba28ae2200565f8 337 Gene3D G3DSA:3.40.630.30 10 330 3.1E-44 T 15-10-2018 Trad_0448 7e88a9f5df11b80161c8d68251800a25 506 Pfam PF01957 NfeD-like C-terminal, partner-binding 301 454 1.3E-10 T 15-10-2018 IPR002810 NfeD-like, C-terminal domain Trad_0448 7e88a9f5df11b80161c8d68251800a25 506 Gene3D G3DSA:3.90.226.10 40 248 3.8E-45 T 15-10-2018 Trad_0448 7e88a9f5df11b80161c8d68251800a25 506 SUPERFAMILY SSF52096 33 209 1.05E-21 T 15-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Trad_0448 7e88a9f5df11b80161c8d68251800a25 506 Pfam PF00574 Clp protease 49 143 4.4E-5 T 15-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA Trad_0448 7e88a9f5df11b80161c8d68251800a25 506 Gene3D G3DSA:2.40.50.140 392 459 4.1E-5 T 15-10-2018 Trad_2634 5f66ac4b506e4c5dab49b87d5ab34496 499 Gene3D G3DSA:3.40.50.720 3 248 4.5E-44 T 15-10-2018 Trad_2634 5f66ac4b506e4c5dab49b87d5ab34496 499 SUPERFAMILY SSF51735 3 239 1.07E-48 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_2634 5f66ac4b506e4c5dab49b87d5ab34496 499 Pfam PF11066 Protein of unknown function (DUF2867) 346 474 4.9E-32 T 15-10-2018 IPR021295 Protein of unknown function DUF2867 Trad_2634 5f66ac4b506e4c5dab49b87d5ab34496 499 SUPERFAMILY SSF55961 342 484 3.65E-7 T 15-10-2018 Trad_2634 5f66ac4b506e4c5dab49b87d5ab34496 499 Pfam PF13460 NAD(P)H-binding 9 125 3.1E-16 T 15-10-2018 IPR016040 NAD(P)-binding domain Trad_1745 8187aba57e8bde60550aee4cc3348d64 482 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 171 195 1.0E-10 T 15-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Trad_1745 8187aba57e8bde60550aee4cc3348d64 482 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 240 264 1.0E-10 T 15-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Trad_1745 8187aba57e8bde60550aee4cc3348d64 482 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 326 345 1.0E-10 T 15-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Trad_1745 8187aba57e8bde60550aee4cc3348d64 482 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 378 404 1.0E-10 T 15-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Trad_1745 8187aba57e8bde60550aee4cc3348d64 482 Pfam PF00361 Proton-conducting membrane transporter 135 419 1.4E-54 T 15-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Trad_0306 0b3d43920bcfd75b6061d825a002ac7f 149 Pfam PF11026 Protein of unknown function (DUF2721) 6 121 1.0E-33 T 15-10-2018 IPR021279 Protein of unknown function DUF2721 Trad_0927 7f379fc081e6541a224c756ade972b0d 496 Pfam PF00884 Sulfatase 4 338 1.7E-38 T 15-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 Trad_0927 7f379fc081e6541a224c756ade972b0d 496 Gene3D G3DSA:3.40.720.10 3 451 2.1E-75 T 15-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 Trad_0927 7f379fc081e6541a224c756ade972b0d 496 SUPERFAMILY SSF53649 4 435 1.23E-80 T 15-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 Trad_2461 927031833b6679dbdb88d1ab22d0325e 368 SUPERFAMILY SSF55920 140 348 3.93E-19 T 15-10-2018 IPR036005 Creatinase/aminopeptidase-like Trad_2461 927031833b6679dbdb88d1ab22d0325e 368 Gene3D G3DSA:3.90.230.10 140 350 1.5E-17 T 15-10-2018 Trad_2461 927031833b6679dbdb88d1ab22d0325e 368 Pfam PF00557 Metallopeptidase family M24 146 336 4.3E-6 T 15-10-2018 IPR000994 Peptidase M24 Trad_2651 0ac3fd5783fdc451ce908099a13df15e 361 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 4 127 3.1E-24 T 15-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Trad_2651 0ac3fd5783fdc451ce908099a13df15e 361 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 185 310 2.8E-17 T 15-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Trad_2651 0ac3fd5783fdc451ce908099a13df15e 361 SUPERFAMILY SSF54593 184 351 1.25E-39 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Trad_2651 0ac3fd5783fdc451ce908099a13df15e 361 SUPERFAMILY SSF54593 1 153 1.02E-45 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Trad_2651 0ac3fd5783fdc451ce908099a13df15e 361 Gene3D G3DSA:3.10.180.10 1 167 7.7E-54 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Trad_2651 0ac3fd5783fdc451ce908099a13df15e 361 Gene3D G3DSA:3.10.180.10 184 351 2.3E-49 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Trad_0618 50905604e01ea4867e3a160b567dad0c 446 SUPERFAMILY SSF53850 17 431 1.93E-65 T 15-10-2018 Trad_0618 50905604e01ea4867e3a160b567dad0c 446 Pfam PF01547 Bacterial extracellular solute-binding protein 60 344 1.8E-25 T 15-10-2018 IPR006059 Bacterial extracellular solute-binding protein Trad_0618 50905604e01ea4867e3a160b567dad0c 446 Gene3D G3DSA:3.40.190.10 63 383 2.0E-85 T 15-10-2018 Trad_0618 50905604e01ea4867e3a160b567dad0c 446 Gene3D G3DSA:3.40.190.10 149 423 2.0E-85 T 15-10-2018 Trad_1162 8f8da3b0e09dd7cd5f8cafd903caf35d 202 Gene3D G3DSA:3.40.109.10 10 175 1.1E-30 T 15-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Trad_1162 8f8da3b0e09dd7cd5f8cafd903caf35d 202 SUPERFAMILY SSF55469 7 193 1.31E-23 T 15-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Trad_1162 8f8da3b0e09dd7cd5f8cafd903caf35d 202 Pfam PF00881 Nitroreductase family 14 144 6.0E-17 T 15-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 Trad_0676 e9de90e24280be131c56c03ccda38186 421 SUPERFAMILY SSF51905 7 412 3.24E-56 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Trad_0676 e9de90e24280be131c56c03ccda38186 421 Gene3D G3DSA:3.50.50.60 3 414 2.8E-37 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Trad_0676 e9de90e24280be131c56c03ccda38186 421 Pfam PF01593 Flavin containing amine oxidoreductase 14 412 4.4E-50 T 15-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 Trad_0941 2a50bb678e04f326014fe7e9cd4789bf 295 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 15 65 1.0E-13 T 15-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain Trad_0941 2a50bb678e04f326014fe7e9cd4789bf 295 Gene3D G3DSA:1.10.3720.10 84 292 5.0E-18 T 15-10-2018 IPR035906 MetI-like superfamily Trad_0941 2a50bb678e04f326014fe7e9cd4789bf 295 SUPERFAMILY SSF161098 89 279 4.74E-23 T 15-10-2018 IPR035906 MetI-like superfamily Trad_0941 2a50bb678e04f326014fe7e9cd4789bf 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 294 8.0E-28 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Trad_2073 70b3d13ec356b10c0f47b66d724edf5f 202 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 4 172 4.4E-73 T 15-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 Trad_2073 70b3d13ec356b10c0f47b66d724edf5f 202 SUPERFAMILY SSF56235 1 174 7.33E-54 T 15-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Trad_2073 70b3d13ec356b10c0f47b66d724edf5f 202 Pfam PF00227 Proteasome subunit 2 172 2.3E-21 T 15-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 Trad_2073 70b3d13ec356b10c0f47b66d724edf5f 202 Gene3D G3DSA:3.60.20.10 1 174 5.4E-58 T 15-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Trad_1533 4b03cc32d8c7ebf3c47799c20a20f49d 346 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Trad_1533 4b03cc32d8c7ebf3c47799c20a20f49d 346 SUPERFAMILY SSF52540 6 246 9.24E-83 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_1533 4b03cc32d8c7ebf3c47799c20a20f49d 346 Gene3D G3DSA:3.40.50.300 3 280 2.5E-75 T 15-10-2018 Trad_1533 4b03cc32d8c7ebf3c47799c20a20f49d 346 Pfam PF00005 ABC transporter 23 167 2.7E-35 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Trad_1533 4b03cc32d8c7ebf3c47799c20a20f49d 346 SUPERFAMILY SSF50331 243 343 1.96E-5 T 15-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal Trad_1533 4b03cc32d8c7ebf3c47799c20a20f49d 346 Pfam PF08402 TOBE domain 274 343 5.0E-5 T 15-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 Trad_1533 4b03cc32d8c7ebf3c47799c20a20f49d 346 SMART SM00382 32 217 1.9E-18 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_0902 4c0a91859f2b615bfb8b131f4891e935 274 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 6 245 3.8E-89 T 15-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Trad_0902 4c0a91859f2b615bfb8b131f4891e935 274 Gene3D G3DSA:3.30.950.10 125 263 2.1E-47 T 15-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 Trad_0902 4c0a91859f2b615bfb8b131f4891e935 274 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 89 122 - T 15-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Trad_0902 4c0a91859f2b615bfb8b131f4891e935 274 SUPERFAMILY SSF53790 3 251 3.93E-74 T 15-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 Trad_0902 4c0a91859f2b615bfb8b131f4891e935 274 Gene3D G3DSA:3.40.1010.10 5 124 1.5E-41 T 15-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 Trad_0902 4c0a91859f2b615bfb8b131f4891e935 274 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 9 221 1.1E-49 T 15-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 Trad_0902 4c0a91859f2b615bfb8b131f4891e935 274 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 11 25 - T 15-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Trad_2131 fdf10d7761b738c9500e2b2e035ed264 167 SUPERFAMILY SSF55729 29 128 1.14E-16 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase Trad_2131 fdf10d7761b738c9500e2b2e035ed264 167 Pfam PF13302 Acetyltransferase (GNAT) domain 8 124 2.6E-10 T 15-10-2018 IPR000182 GNAT domain Trad_2131 fdf10d7761b738c9500e2b2e035ed264 167 Gene3D G3DSA:3.40.630.30 2 141 3.0E-16 T 15-10-2018 Trad_1700 2f81cccc6715f1419522208f5112d133 439 Gene3D G3DSA:3.40.50.300 169 345 1.9E-46 T 15-10-2018 Trad_1700 2f81cccc6715f1419522208f5112d133 439 Gene3D G3DSA:3.30.300.20 347 430 6.2E-26 T 15-10-2018 IPR015946 K homology domain-like, alpha/beta Trad_1700 2f81cccc6715f1419522208f5112d133 439 PIRSF PIRSF006485 1 435 3.1E-146 T 15-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 Trad_1700 2f81cccc6715f1419522208f5112d133 439 SUPERFAMILY SSF52540 3 168 1.11E-40 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_1700 2f81cccc6715f1419522208f5112d133 439 SUPERFAMILY SSF52540 138 431 8.7E-64 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_1700 2f81cccc6715f1419522208f5112d133 439 Gene3D G3DSA:3.40.50.300 1 164 1.8E-41 T 15-10-2018 Trad_1700 2f81cccc6715f1419522208f5112d133 439 Hamap MF_00195 GTPase Der [der]. 1 430 34.964 T 15-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 Trad_1700 2f81cccc6715f1419522208f5112d133 439 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 347 427 4.0E-25 T 15-10-2018 IPR032859 GTPase Der, C-terminal KH-domain-like Trad_1700 2f81cccc6715f1419522208f5112d133 439 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 174 330 1.8E-22 T 15-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Trad_1700 2f81cccc6715f1419522208f5112d133 439 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 2 156 3.5E-17 T 15-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Trad_1700 2f81cccc6715f1419522208f5112d133 439 Pfam PF01926 50S ribosome-binding GTPase 176 291 2.6E-24 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 Trad_1700 2f81cccc6715f1419522208f5112d133 439 Pfam PF01926 50S ribosome-binding GTPase 3 118 5.0E-25 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 Trad_1700 2f81cccc6715f1419522208f5112d133 439 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 427 2.0E-144 T 15-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 Trad_1515 97c5731ec55050baedba8b7babb3fb6e 415 SMART SM00740 93 158 5.1E-4 T 15-10-2018 IPR005543 PASTA domain Trad_1515 97c5731ec55050baedba8b7babb3fb6e 415 SMART SM00740 227 291 0.62 T 15-10-2018 IPR005543 PASTA domain Trad_1515 97c5731ec55050baedba8b7babb3fb6e 415 SMART SM00740 161 225 7.6E-6 T 15-10-2018 IPR005543 PASTA domain Trad_1515 97c5731ec55050baedba8b7babb3fb6e 415 SMART SM00740 26 92 3.1E-7 T 15-10-2018 IPR005543 PASTA domain Trad_1515 97c5731ec55050baedba8b7babb3fb6e 415 Pfam PF03793 PASTA domain 30 88 1.2E-11 T 15-10-2018 IPR005543 PASTA domain Trad_1515 97c5731ec55050baedba8b7babb3fb6e 415 Pfam PF03793 PASTA domain 98 157 1.8E-8 T 15-10-2018 IPR005543 PASTA domain Trad_1515 97c5731ec55050baedba8b7babb3fb6e 415 Pfam PF03793 PASTA domain 165 224 4.3E-5 T 15-10-2018 IPR005543 PASTA domain Trad_1515 97c5731ec55050baedba8b7babb3fb6e 415 Gene3D G3DSA:3.30.10.20 30 92 5.5E-12 T 15-10-2018 Trad_1515 97c5731ec55050baedba8b7babb3fb6e 415 Gene3D G3DSA:3.30.10.20 162 225 6.7E-7 T 15-10-2018 Trad_1515 97c5731ec55050baedba8b7babb3fb6e 415 Gene3D G3DSA:3.30.10.20 231 291 1.9E-9 T 15-10-2018 Trad_1515 97c5731ec55050baedba8b7babb3fb6e 415 Gene3D G3DSA:3.30.10.20 93 161 1.8E-13 T 15-10-2018 Trad_0359 c561c7eaa0ec16ab1a86ddbd697f6303 459 Pfam PF00571 CBS domain 208 261 6.0E-10 T 15-10-2018 IPR000644 CBS domain Trad_0359 c561c7eaa0ec16ab1a86ddbd697f6303 459 Pfam PF00571 CBS domain 144 187 4.6E-4 T 15-10-2018 IPR000644 CBS domain Trad_0359 c561c7eaa0ec16ab1a86ddbd697f6303 459 Pfam PF01769 Divalent cation transporter 330 450 3.3E-27 T 15-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 Trad_0359 c561c7eaa0ec16ab1a86ddbd697f6303 459 SMART SM00116 215 263 3.4E-7 T 15-10-2018 IPR000644 CBS domain Trad_0359 c561c7eaa0ec16ab1a86ddbd697f6303 459 Pfam PF03448 MgtE intracellular N domain 45 142 2.4E-23 T 15-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain Trad_0359 c561c7eaa0ec16ab1a86ddbd697f6303 459 SMART SM00924 41 144 2.7E-25 T 15-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain Trad_0359 c561c7eaa0ec16ab1a86ddbd697f6303 459 SUPERFAMILY SSF54631 143 284 6.95E-31 T 15-10-2018 Trad_0359 c561c7eaa0ec16ab1a86ddbd697f6303 459 Gene3D G3DSA:1.10.357.20 282 457 1.2E-54 T 15-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain Trad_0359 c561c7eaa0ec16ab1a86ddbd697f6303 459 SUPERFAMILY SSF158791 17 141 2.22E-22 T 15-10-2018 Trad_0359 c561c7eaa0ec16ab1a86ddbd697f6303 459 TIGRFAM TIGR00400 mgtE: magnesium transporter 45 458 3.3E-115 T 15-10-2018 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 Trad_0359 c561c7eaa0ec16ab1a86ddbd697f6303 459 Gene3D G3DSA:3.10.580.10 140 268 2.4E-41 T 15-10-2018 Trad_0359 c561c7eaa0ec16ab1a86ddbd697f6303 459 Gene3D G3DSA:1.25.60.10 10 139 6.5E-21 T 15-10-2018 IPR038076 MgtE, N-terminal domain superfamily Trad_0359 c561c7eaa0ec16ab1a86ddbd697f6303 459 SUPERFAMILY SSF161093 291 457 1.83E-47 T 15-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 Trad_0942 1ba805debca6c1399485805377ab3016 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 304 3.6E-41 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Trad_0942 1ba805debca6c1399485805377ab3016 306 SUPERFAMILY SSF161098 90 292 2.78E-19 T 15-10-2018 IPR035906 MetI-like superfamily Trad_0942 1ba805debca6c1399485805377ab3016 306 Gene3D G3DSA:1.10.3720.10 85 299 2.4E-24 T 15-10-2018 IPR035906 MetI-like superfamily Trad_2600 53446304cc7af01db6e5e11912d3c3ea 299 SUPERFAMILY SSF53697 65 288 1.2E-23 T 15-10-2018 Trad_2600 53446304cc7af01db6e5e11912d3c3ea 299 Pfam PF10432 Bacterial phospho-glucose isomerase C-terminal SIS domain 152 290 1.5E-9 T 15-10-2018 IPR019490 Bifunctional glucose-6-phosphate/mannose-6-phosphate isomerase, C-terminal GO:0004347|GO:0004476|GO:0005975 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00051+5.3.1.8|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.8+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882 Trad_2600 53446304cc7af01db6e5e11912d3c3ea 299 Gene3D G3DSA:3.40.50.10920 15 142 4.6E-42 T 15-10-2018 Trad_2600 53446304cc7af01db6e5e11912d3c3ea 299 Gene3D G3DSA:3.40.50.10490 145 281 3.8E-53 T 15-10-2018 Trad_2098 7d30be5d56fa841c5c3847342f549199 731 Pfam PF03639 Glycosyl hydrolase family 81 285 650 7.1E-64 T 15-10-2018 IPR005200 Endo-1,3(4)-beta-glucanase GO:0052861 Trad_2650 01fd487af2cabb3991377f5118418036 220 Pfam PF02230 Phospholipase/Carboxylesterase 18 207 1.8E-23 T 15-10-2018 IPR003140 Phospholipase/carboxylesterase/thioesterase GO:0016787 Trad_2650 01fd487af2cabb3991377f5118418036 220 SUPERFAMILY SSF53474 15 207 1.92E-37 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold Trad_2650 01fd487af2cabb3991377f5118418036 220 Gene3D G3DSA:3.40.50.1820 3 208 1.9E-52 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold Trad_0400 e7bc3cd18f9366e96004b4efe74b0427 209 SUPERFAMILY SSF54631 1 131 2.78E-35 T 15-10-2018 Trad_0400 e7bc3cd18f9366e96004b4efe74b0427 209 SMART SM00116 10 57 5.4E-12 T 15-10-2018 IPR000644 CBS domain Trad_0400 e7bc3cd18f9366e96004b4efe74b0427 209 SMART SM00116 84 131 3.0E-11 T 15-10-2018 IPR000644 CBS domain Trad_0400 e7bc3cd18f9366e96004b4efe74b0427 209 Gene3D G3DSA:3.10.580.10 1 148 3.6E-40 T 15-10-2018 Trad_0400 e7bc3cd18f9366e96004b4efe74b0427 209 Pfam PF00571 CBS domain 77 131 6.9E-14 T 15-10-2018 IPR000644 CBS domain Trad_0400 e7bc3cd18f9366e96004b4efe74b0427 209 Pfam PF00571 CBS domain 3 54 2.4E-13 T 15-10-2018 IPR000644 CBS domain Trad_2100 82fac05ead34376777c04999a659477a 291 Gene3D G3DSA:1.10.3720.10 17 281 2.0E-60 T 15-10-2018 IPR035906 MetI-like superfamily Trad_2100 82fac05ead34376777c04999a659477a 291 SUPERFAMILY SSF161098 22 291 7.1E-66 T 15-10-2018 IPR035906 MetI-like superfamily Trad_2100 82fac05ead34376777c04999a659477a 291 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 107 275 3.0E-19 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Trad_2104 f9e3990e99cb87b5f4d1ad05a26b0a2d 335 Gene3D G3DSA:3.40.50.2300 160 289 2.8E-85 T 15-10-2018 Trad_2104 f9e3990e99cb87b5f4d1ad05a26b0a2d 335 Gene3D G3DSA:1.10.260.40 3 59 4.7E-22 T 15-10-2018 Trad_2104 f9e3990e99cb87b5f4d1ad05a26b0a2d 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 3.1E-17 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Trad_2104 f9e3990e99cb87b5f4d1ad05a26b0a2d 335 SMART SM00354 1 71 6.8E-27 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Trad_2104 f9e3990e99cb87b5f4d1ad05a26b0a2d 335 Pfam PF13377 Periplasmic binding protein-like domain 169 329 2.3E-37 T 15-10-2018 Trad_2104 f9e3990e99cb87b5f4d1ad05a26b0a2d 335 SUPERFAMILY SSF53822 62 330 1.3E-86 T 15-10-2018 IPR028082 Periplasmic binding protein-like I Trad_2104 f9e3990e99cb87b5f4d1ad05a26b0a2d 335 SUPERFAMILY SSF47413 2 59 6.75E-17 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Trad_2104 f9e3990e99cb87b5f4d1ad05a26b0a2d 335 Gene3D G3DSA:3.40.50.2300 62 305 2.8E-85 T 15-10-2018 Trad_0529 a28c6bcdf7ea042cdd015fc54256d3e0 289 SUPERFAMILY SSF56300 2 230 1.49E-42 T 15-10-2018 Trad_0529 a28c6bcdf7ea042cdd015fc54256d3e0 289 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 2 201 9.4E-18 T 15-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 Trad_0529 a28c6bcdf7ea042cdd015fc54256d3e0 289 Gene3D G3DSA:3.60.21.10 2 241 1.9E-47 T 15-10-2018 IPR029052 Metallo-dependent phosphatase-like Trad_0640 19d9ce83e197c387389523ce43f470df 422 SUPERFAMILY SSF51338 1 420 2.16E-22 T 15-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Trad_0640 19d9ce83e197c387389523ce43f470df 422 TIGRFAM TIGR00857 pyrC_multi: dihydroorotase, multifunctional complex type 21 419 4.2E-116 T 15-10-2018 Trad_0640 19d9ce83e197c387389523ce43f470df 422 ProSitePatterns PS00483 Dihydroorotase signature 2. 300 311 - T 15-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Trad_0640 19d9ce83e197c387389523ce43f470df 422 Gene3D G3DSA:3.20.20.140 53 365 1.5E-134 T 15-10-2018 Trad_0640 19d9ce83e197c387389523ce43f470df 422 ProSitePatterns PS00482 Dihydroorotase signature 1. 55 63 - T 15-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Trad_0640 19d9ce83e197c387389523ce43f470df 422 Gene3D G3DSA:2.30.40.10 10 417 1.5E-134 T 15-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Trad_0640 19d9ce83e197c387389523ce43f470df 422 Pfam PF01979 Amidohydrolase family 48 417 1.1E-28 T 15-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Trad_0640 19d9ce83e197c387389523ce43f470df 422 Hamap MF_00220_B Dihydroorotase [pyrC]. 3 421 41.908 T 15-10-2018 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Trad_0640 19d9ce83e197c387389523ce43f470df 422 SUPERFAMILY SSF51556 53 363 3.01E-95 T 15-10-2018 IPR032466 Metal-dependent hydrolase Trad_0163 83d83c2b5ad587a2e61acdd66d438bb6 288 Pfam PF01370 NAD dependent epimerase/dehydratase family 8 184 5.1E-25 T 15-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 Trad_0163 83d83c2b5ad587a2e61acdd66d438bb6 288 Gene3D G3DSA:3.40.50.720 2 285 1.9E-41 T 15-10-2018 Trad_0163 83d83c2b5ad587a2e61acdd66d438bb6 288 SUPERFAMILY SSF51735 3 283 1.56E-47 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_0924 96180fa42eb2c51a0bd32ab4b0cbc9ed 310 SUPERFAMILY SSF161098 117 297 1.16E-19 T 15-10-2018 IPR035906 MetI-like superfamily Trad_0924 96180fa42eb2c51a0bd32ab4b0cbc9ed 310 Gene3D G3DSA:1.10.3720.10 105 301 5.3E-16 T 15-10-2018 IPR035906 MetI-like superfamily Trad_0924 96180fa42eb2c51a0bd32ab4b0cbc9ed 310 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 124 300 2.3E-18 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Trad_1706 22b07833d61445b75a101cf050badcb6 454 SUPERFAMILY SSF82861 137 219 1.29E-5 T 15-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 Trad_1706 22b07833d61445b75a101cf050badcb6 454 Pfam PF00924 Mechanosensitive ion channel 178 378 2.2E-41 T 15-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 Trad_1706 22b07833d61445b75a101cf050badcb6 454 SUPERFAMILY SSF82689 288 387 1.7E-22 T 15-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 Trad_1706 22b07833d61445b75a101cf050badcb6 454 Gene3D G3DSA:2.30.30.60 237 286 3.1E-8 T 15-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily Trad_1706 22b07833d61445b75a101cf050badcb6 454 Gene3D G3DSA:3.30.70.100 287 382 1.1E-18 T 15-10-2018 Trad_1706 22b07833d61445b75a101cf050badcb6 454 SUPERFAMILY SSF50182 221 287 2.84E-13 T 15-10-2018 IPR010920 LSM domain superfamily Trad_1706 22b07833d61445b75a101cf050badcb6 454 Pfam PF04972 BON domain 45 109 2.3E-7 T 15-10-2018 IPR007055 BON domain Trad_2945 10f4cf8bbdbf43d730a50767ed9f9d36 442 Gene3D G3DSA:3.40.1480.10 266 426 2.7E-139 T 15-10-2018 IPR037035 Glycerate kinase-like, C-terminal domain superfamily Trad_2945 10f4cf8bbdbf43d730a50767ed9f9d36 442 Gene3D G3DSA:3.40.50.10180 37 265 2.7E-139 T 15-10-2018 IPR038614 Glycerate kinase, N-terminal domain superfamily Reactome: R-HSA-70350 Trad_2945 10f4cf8bbdbf43d730a50767ed9f9d36 442 SUPERFAMILY SSF82544 10 430 2.88E-137 T 15-10-2018 Trad_2945 10f4cf8bbdbf43d730a50767ed9f9d36 442 Pfam PF05161 MOFRL family 322 424 9.4E-34 T 15-10-2018 IPR007835 MOFRL domain Reactome: R-HSA-70350 Trad_2945 10f4cf8bbdbf43d730a50767ed9f9d36 442 Pfam PF13660 Domain of unknown function (DUF4147) 13 237 5.4E-80 T 15-10-2018 IPR025286 MOFRL-associated domain Reactome: R-HSA-70350 Trad_2390 fc64130e831cbad0973ea0ac1fc27b75 232 SUPERFAMILY SSF50199 72 227 1.96E-30 T 15-10-2018 Trad_2390 fc64130e831cbad0973ea0ac1fc27b75 232 Gene3D G3DSA:2.40.50.90 67 227 1.6E-37 T 15-10-2018 IPR035437 SNase-like, OB-fold superfamily Trad_2390 fc64130e831cbad0973ea0ac1fc27b75 232 ProSitePatterns PS01123 Thermonuclease family signature 1. 80 104 - T 15-10-2018 IPR002071 Thermonuclease active site GO:0003676|GO:0004518 Reactome: R-HSA-6802952 Trad_2390 fc64130e831cbad0973ea0ac1fc27b75 232 Pfam PF00565 Staphylococcal nuclease homologue 94 225 1.8E-20 T 15-10-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold Reactome: R-HSA-6802952 Trad_2390 fc64130e831cbad0973ea0ac1fc27b75 232 SMART SM00318 72 225 4.3E-30 T 15-10-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold Reactome: R-HSA-6802952 Trad_1902 383c44783af245ddeee00c195436edc2 283 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 22 277 2.0E-77 T 15-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 Trad_1902 383c44783af245ddeee00c195436edc2 283 Gene3D G3DSA:1.10.3720.10 63 280 6.9E-31 T 15-10-2018 IPR035906 MetI-like superfamily Trad_1902 383c44783af245ddeee00c195436edc2 283 SUPERFAMILY SSF161098 26 272 3.92E-35 T 15-10-2018 IPR035906 MetI-like superfamily Trad_1902 383c44783af245ddeee00c195436edc2 283 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 90 276 9.6E-27 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Trad_1928 b4b3c833ca41c0a2ac89302b2801a09d 160 Hamap MF_01114 Regulatory protein RecX [recX]. 4 158 15.062 T 15-10-2018 IPR003783 Regulatory protein RecX GO:0006282 Trad_1928 b4b3c833ca41c0a2ac89302b2801a09d 160 Pfam PF02631 RecX family 36 153 3.9E-30 T 15-10-2018 IPR003783 Regulatory protein RecX GO:0006282 Trad_1928 b4b3c833ca41c0a2ac89302b2801a09d 160 Gene3D G3DSA:1.10.10.10 60 103 5.1E-14 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Trad_0573 71fbfedc7bf595cff7604266e5e3b243 325 Pfam PF02653 Branched-chain amino acid transport system / permease component 41 303 1.7E-38 T 15-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Trad_0670 f4805bf80120ff3e461b1c099f383059 79 Gene3D G3DSA:3.40.50.1980 26 79 4.8E-14 T 15-10-2018 Trad_0670 f4805bf80120ff3e461b1c099f383059 79 SUPERFAMILY SSF53807 23 74 3.92E-12 T 15-10-2018 Trad_1571 2e33ee84d805969996eb5cf972c56274 263 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 88 249 1.2E-15 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Trad_1571 2e33ee84d805969996eb5cf972c56274 263 SUPERFAMILY SSF161098 65 250 6.15E-30 T 15-10-2018 IPR035906 MetI-like superfamily Trad_1571 2e33ee84d805969996eb5cf972c56274 263 Gene3D G3DSA:1.10.3720.10 62 257 3.2E-26 T 15-10-2018 IPR035906 MetI-like superfamily Trad_1199 605a8141794097980cce26ed1d93b4e9 147 Gene3D G3DSA:3.60.90.10 4 131 7.7E-11 T 15-10-2018 Trad_1199 605a8141794097980cce26ed1d93b4e9 147 Pfam PF02675 S-adenosylmethionine decarboxylase 9 109 8.0E-12 T 15-10-2018 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 Trad_1199 605a8141794097980cce26ed1d93b4e9 147 SUPERFAMILY SSF56276 6 111 8.63E-6 T 15-10-2018 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 Trad_0557 74ea12d55f359e51dd22c156674e505c 498 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 1 19 7.9E-6 T 15-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal Trad_0557 74ea12d55f359e51dd22c156674e505c 498 SUPERFAMILY SSF53649 34 475 6.67E-97 T 15-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 Trad_0557 74ea12d55f359e51dd22c156674e505c 498 Gene3D G3DSA:1.10.1200.140 368 443 2.6E-99 T 15-10-2018 Trad_0557 74ea12d55f359e51dd22c156674e505c 498 PRINTS PR00113 Alkaline phosphatase signature 251 280 4.1E-34 T 15-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 Trad_0557 74ea12d55f359e51dd22c156674e505c 498 PRINTS PR00113 Alkaline phosphatase signature 134 154 4.1E-34 T 15-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 Trad_0557 74ea12d55f359e51dd22c156674e505c 498 PRINTS PR00113 Alkaline phosphatase signature 97 112 4.1E-34 T 15-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 Trad_0557 74ea12d55f359e51dd22c156674e505c 498 PRINTS PR00113 Alkaline phosphatase signature 43 63 4.1E-34 T 15-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 Trad_0557 74ea12d55f359e51dd22c156674e505c 498 PRINTS PR00113 Alkaline phosphatase signature 178 188 4.1E-34 T 15-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 Trad_0557 74ea12d55f359e51dd22c156674e505c 498 SMART SM00098 44 472 1.6E-41 T 15-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 Trad_0557 74ea12d55f359e51dd22c156674e505c 498 Gene3D G3DSA:3.40.720.10 44 445 2.6E-99 T 15-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 Trad_0557 74ea12d55f359e51dd22c156674e505c 498 Pfam PF00245 Alkaline phosphatase 43 470 1.6E-69 T 15-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 Trad_1672 fbfd444323136c18eb8bb70ea32f1695 343 Hamap MF_01470 CRISPR-associated endonuclease Cas1 [cas1]. 6 328 27.205 T 15-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 Trad_1672 fbfd444323136c18eb8bb70ea32f1695 343 Gene3D G3DSA:1.20.120.920 86 343 7.4E-76 T 15-10-2018 Trad_1672 fbfd444323136c18eb8bb70ea32f1695 343 TIGRFAM TIGR00287 cas1: CRISPR-associated endonuclease Cas1 7 336 1.0E-77 T 15-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 Trad_1672 fbfd444323136c18eb8bb70ea32f1695 343 Pfam PF01867 CRISPR associated protein Cas1 8 298 2.5E-99 T 15-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 Trad_1672 fbfd444323136c18eb8bb70ea32f1695 343 Gene3D G3DSA:3.100.10.20 6 84 4.2E-18 T 15-10-2018 Trad_1672 fbfd444323136c18eb8bb70ea32f1695 343 TIGRFAM TIGR03640 cas1_DVULG: CRISPR-associated endonuclease Cas1, subtype I-C/DVULG 4 341 2.0E-149 T 15-10-2018 IPR019856 CRISPR-associated protein Cas1, DVULG subtype GO:0004520|GO:0043571|GO:0046872 Trad_0516 0f48a3171b56f93d14582afced762fec 369 Pfam PF03704 Bacterial transcriptional activator domain 122 243 4.6E-15 T 15-10-2018 IPR005158 Bacterial transcriptional activator domain Trad_0516 0f48a3171b56f93d14582afced762fec 369 SMART SM01043 106 243 7.6E-20 T 15-10-2018 IPR005158 Bacterial transcriptional activator domain Trad_0516 0f48a3171b56f93d14582afced762fec 369 SUPERFAMILY SSF48452 105 257 1.17E-15 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Trad_0516 0f48a3171b56f93d14582afced762fec 369 Gene3D G3DSA:1.25.40.10 96 273 5.9E-20 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Trad_1816 67dff8ccd4b9a887487d9785dfff527e 256 SUPERFAMILY SSF56300 2 256 2.31E-44 T 15-10-2018 Trad_1816 67dff8ccd4b9a887487d9785dfff527e 256 PIRSF PIRSF000883 1 256 8.1E-50 T 15-10-2018 IPR011152 Phosphoesterase MJ0912 Trad_1816 67dff8ccd4b9a887487d9785dfff527e 256 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 2 217 1.4E-21 T 15-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 Trad_1816 67dff8ccd4b9a887487d9785dfff527e 256 Gene3D G3DSA:3.60.21.10 1 256 2.8E-55 T 15-10-2018 IPR029052 Metallo-dependent phosphatase-like Trad_0832 662fb6e67fbeb82061d87347a4bb452c 274 Gene3D G3DSA:3.40.50.2300 2 115 2.5E-5 T 15-10-2018 Trad_0832 662fb6e67fbeb82061d87347a4bb452c 274 SUPERFAMILY SSF52172 5 83 1.06E-6 T 15-10-2018 IPR011006 CheY-like superfamily Trad_0832 662fb6e67fbeb82061d87347a4bb452c 274 Pfam PF14332 Domain of unknown function (DUF4388) 161 263 3.8E-11 T 15-10-2018 IPR025497 Domain of unknown function DUF4388 Trad_2448 7675c9bf72d0a28534e86735bc715293 265 SUPERFAMILY SSF51695 29 258 1.57E-47 T 15-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 Trad_2448 7675c9bf72d0a28534e86735bc715293 265 Gene3D G3DSA:3.20.20.190 25 258 1.3E-55 T 15-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 Trad_2448 7675c9bf72d0a28534e86735bc715293 265 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 35 253 1.2E-20 T 15-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 Trad_2307 a8e97ea9ac25e200aea0ef011a01e337 230 Gene3D G3DSA:3.30.70.2660 1 230 7.3E-66 T 15-10-2018 Trad_2307 a8e97ea9ac25e200aea0ef011a01e337 230 TIGRFAM TIGR02593 CRISPR_cas5: CRISPR-associated protein Cas5 3 45 2.2E-13 T 15-10-2018 IPR013422 CRISPR-associated protein Cas5, N-terminal Trad_2307 a8e97ea9ac25e200aea0ef011a01e337 230 Pfam PF09704 CRISPR-associated protein (Cas_Cas5) 3 214 3.2E-52 T 15-10-2018 IPR021124 CRISPR-associated protein, Cas5 GO:0043571 Trad_2307 a8e97ea9ac25e200aea0ef011a01e337 230 TIGRFAM TIGR01868 casD_Cas5e: CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI 3 209 3.2E-45 T 15-10-2018 IPR010147 CRISPR-associated protein, CasD GO:0003723|GO:0051607 Trad_1536 62b2462f918a5ef419efa83e23d7e12d 529 SUPERFAMILY SSF161098 17 261 2.94E-47 T 15-10-2018 IPR035906 MetI-like superfamily Trad_1536 62b2462f918a5ef419efa83e23d7e12d 529 SUPERFAMILY SSF161098 287 523 2.09E-38 T 15-10-2018 IPR035906 MetI-like superfamily Trad_1536 62b2462f918a5ef419efa83e23d7e12d 529 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 353 516 7.4E-14 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Trad_1536 62b2462f918a5ef419efa83e23d7e12d 529 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 94 263 5.2E-15 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Trad_1536 62b2462f918a5ef419efa83e23d7e12d 529 Gene3D G3DSA:1.10.3720.10 20 272 3.2E-56 T 15-10-2018 IPR035906 MetI-like superfamily Trad_1536 62b2462f918a5ef419efa83e23d7e12d 529 Gene3D G3DSA:1.10.3720.10 288 528 1.8E-40 T 15-10-2018 IPR035906 MetI-like superfamily Trad_0775 17abdbc36fd7e6ac8caeda6b81e9611d 293 Pfam PF10503 Esterase PHB depolymerase 76 208 1.3E-5 T 15-10-2018 IPR010126 Esterase, PHB depolymerase GO:0005576|GO:0016787 Trad_0775 17abdbc36fd7e6ac8caeda6b81e9611d 293 SUPERFAMILY SSF53474 63 228 4.22E-19 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold Trad_0775 17abdbc36fd7e6ac8caeda6b81e9611d 293 Gene3D G3DSA:3.40.50.1820 46 290 2.7E-28 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold Trad_2693 8f8aea453678ec5cae95d53c5830af39 309 SUPERFAMILY SSF161098 92 288 4.06E-20 T 15-10-2018 IPR035906 MetI-like superfamily Trad_2693 8f8aea453678ec5cae95d53c5830af39 309 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 305 1.2E-44 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Trad_2693 8f8aea453678ec5cae95d53c5830af39 309 Gene3D G3DSA:1.10.3720.10 87 300 6.7E-28 T 15-10-2018 IPR035906 MetI-like superfamily Trad_2728 469b9b2db2f6845d54590de7845b5cd5 431 Pfam PF05036 Sporulation related domain 160 229 6.6E-11 T 15-10-2018 IPR007730 Sporulation-like domain GO:0042834 Trad_2728 469b9b2db2f6845d54590de7845b5cd5 431 Pfam PF05036 Sporulation related domain 362 429 1.0E-10 T 15-10-2018 IPR007730 Sporulation-like domain GO:0042834 Trad_2728 469b9b2db2f6845d54590de7845b5cd5 431 SUPERFAMILY SSF110997 159 231 2.09E-11 T 15-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 Trad_2728 469b9b2db2f6845d54590de7845b5cd5 431 Gene3D G3DSA:3.30.70.1070 161 230 2.1E-10 T 15-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 Trad_2728 469b9b2db2f6845d54590de7845b5cd5 431 Gene3D G3DSA:3.30.70.1070 363 431 1.2E-7 T 15-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 Trad_2728 469b9b2db2f6845d54590de7845b5cd5 431 SUPERFAMILY SSF110997 361 428 1.96E-11 T 15-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 Trad_0354 9a4b62b44e9a6860a5d3080458e75469 260 SUPERFAMILY SSF56784 2 254 1.87E-48 T 15-10-2018 IPR036412 HAD-like superfamily Trad_0354 9a4b62b44e9a6860a5d3080458e75469 260 Gene3D G3DSA:3.40.50.1000 3 249 2.5E-44 T 15-10-2018 IPR023214 HAD superfamily Trad_0354 9a4b62b44e9a6860a5d3080458e75469 260 Pfam PF08282 haloacid dehalogenase-like hydrolase 3 251 5.1E-40 T 15-10-2018 Trad_0354 9a4b62b44e9a6860a5d3080458e75469 260 Gene3D G3DSA:3.30.1240.10 80 180 2.5E-44 T 15-10-2018 Trad_2699 466d2cb3d9cf7294828c1cdbdf75e409 208 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 49 167 2.7E-8 T 15-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 Trad_2699 466d2cb3d9cf7294828c1cdbdf75e409 208 Gene3D G3DSA:1.10.340.30 42 149 4.0E-52 T 15-10-2018 Trad_2699 466d2cb3d9cf7294828c1cdbdf75e409 208 SUPERFAMILY SSF48150 38 197 4.87E-37 T 15-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 Trad_2699 466d2cb3d9cf7294828c1cdbdf75e409 208 SMART SM00478 53 199 2.5E-5 T 15-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 Trad_2699 466d2cb3d9cf7294828c1cdbdf75e409 208 Gene3D G3DSA:1.10.1670.40 17 196 4.0E-52 T 15-10-2018 Trad_0140 fadacb76e547e7636ea3dfcc3936ff8b 229 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 87 184 4.5E-11 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Trad_0140 fadacb76e547e7636ea3dfcc3936ff8b 229 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 91 178 2.0E-7 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Trad_0140 fadacb76e547e7636ea3dfcc3936ff8b 229 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 185 3.6E-31 T 15-10-2018 Trad_0140 fadacb76e547e7636ea3dfcc3936ff8b 229 SUPERFAMILY SSF56784 2 210 1.47E-48 T 15-10-2018 IPR036412 HAD-like superfamily Trad_0140 fadacb76e547e7636ea3dfcc3936ff8b 229 Gene3D G3DSA:1.10.150.240 19 84 1.3E-44 T 15-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 Trad_0140 fadacb76e547e7636ea3dfcc3936ff8b 229 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 148 168 7.0E-6 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Trad_0140 fadacb76e547e7636ea3dfcc3936ff8b 229 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 99 112 7.0E-6 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Trad_0140 fadacb76e547e7636ea3dfcc3936ff8b 229 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 4 15 7.0E-6 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Trad_0140 fadacb76e547e7636ea3dfcc3936ff8b 229 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 130 146 7.0E-6 T 15-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Trad_0140 fadacb76e547e7636ea3dfcc3936ff8b 229 Gene3D G3DSA:3.40.50.1000 7 199 1.3E-44 T 15-10-2018 IPR023214 HAD superfamily Trad_1238 267f5cdf5c0f0c42865802cb05268398 174 Pfam PF10002 Predicted membrane protein (DUF2243) 36 164 1.3E-27 T 15-10-2018 IPR018719 Protein of unknown function DUF2243, membrane Trad_2196 8c0a818d6d6c1f175523407ff2fb9aa7 229 SUPERFAMILY SSF53335 29 208 1.77E-19 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Trad_2196 8c0a818d6d6c1f175523407ff2fb9aa7 229 Pfam PF13649 Methyltransferase domain 64 149 8.4E-11 T 15-10-2018 Trad_2196 8c0a818d6d6c1f175523407ff2fb9aa7 229 Gene3D G3DSA:3.40.50.150 43 165 4.3E-17 T 15-10-2018 Trad_1357 3fa3e1fffbc26ea4e155e41af17655f7 232 Pfam PF02230 Phospholipase/Carboxylesterase 34 204 8.7E-8 T 15-10-2018 IPR003140 Phospholipase/carboxylesterase/thioesterase GO:0016787 Trad_1357 3fa3e1fffbc26ea4e155e41af17655f7 232 Gene3D G3DSA:3.40.50.1820 10 229 1.4E-29 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold Trad_1357 3fa3e1fffbc26ea4e155e41af17655f7 232 SUPERFAMILY SSF53474 18 229 8.27E-26 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold Trad_0408 1593f28e8bdcd686ed63d6af2fa81923 159 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 12 150 1.4E-23 T 15-10-2018 IPR000979 Phosphodiesterase MJ0936/Vps29 Reactome: R-HSA-3238698 Trad_0408 1593f28e8bdcd686ed63d6af2fa81923 159 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 12 146 1.6E-29 T 15-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 Trad_0408 1593f28e8bdcd686ed63d6af2fa81923 159 SUPERFAMILY SSF56300 11 158 6.42E-35 T 15-10-2018 Trad_0408 1593f28e8bdcd686ed63d6af2fa81923 159 Gene3D G3DSA:3.60.21.10 7 157 8.8E-30 T 15-10-2018 IPR029052 Metallo-dependent phosphatase-like Trad_1619 837f354895c9cfb8fee91a8b8026040e 306 Gene3D G3DSA:3.40.50.300 2 306 9.0E-92 T 15-10-2018 Trad_1619 837f354895c9cfb8fee91a8b8026040e 306 SUPERFAMILY SSF52540 4 304 1.51E-71 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_1619 837f354895c9cfb8fee91a8b8026040e 306 Hamap MF_00215 Pantothenate kinase [coaA]. 1 306 174.892 T 15-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 Trad_1619 837f354895c9cfb8fee91a8b8026040e 306 TIGRFAM TIGR00554 panK_bact: pantothenate kinase 5 305 4.1E-141 T 15-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 Trad_1619 837f354895c9cfb8fee91a8b8026040e 306 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 84 229 4.8E-13 T 15-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 Trad_1619 837f354895c9cfb8fee91a8b8026040e 306 PIRSF PIRSF000545 1 306 1.1E-143 T 15-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 Trad_0453 e90046a328b32db448a102b95b21c135 249 Hamap MF_00082 Acetylglutamate kinase [argB]. 1 244 37.715 T 15-10-2018 IPR037528 Acetylglutamate kinase ArgB GO:0003991|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Trad_0453 e90046a328b32db448a102b95b21c135 249 SUPERFAMILY SSF53633 3 248 3.53E-54 T 15-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Trad_0453 e90046a328b32db448a102b95b21c135 249 PIRSF PIRSF000728 1 249 4.9E-70 T 15-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Trad_0453 e90046a328b32db448a102b95b21c135 249 Gene3D G3DSA:3.40.1160.10 1 248 7.1E-63 T 15-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Trad_0453 e90046a328b32db448a102b95b21c135 249 TIGRFAM TIGR00761 argB: acetylglutamate kinase 3 226 1.4E-54 T 15-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Trad_0453 e90046a328b32db448a102b95b21c135 249 Pfam PF00696 Amino acid kinase family 2 226 6.2E-34 T 15-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 Trad_0480 dbd665d03f2bf779dfb08aa99ca1fc72 236 Hamap MF_00564 Ribonuclease PH [rph]. 10 236 40.187 T 15-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 Trad_0480 dbd665d03f2bf779dfb08aa99ca1fc72 236 Pfam PF03725 3' exoribonuclease family, domain 2 158 217 8.2E-6 T 15-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Trad_0480 dbd665d03f2bf779dfb08aa99ca1fc72 236 Pfam PF01138 3' exoribonuclease family, domain 1 9 139 1.9E-20 T 15-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Trad_0480 dbd665d03f2bf779dfb08aa99ca1fc72 236 Gene3D G3DSA:3.30.230.70 9 234 1.5E-49 T 15-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Trad_0480 dbd665d03f2bf779dfb08aa99ca1fc72 236 SUPERFAMILY SSF55666 151 231 3.8E-17 T 15-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Trad_0480 dbd665d03f2bf779dfb08aa99ca1fc72 236 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 3 230 1.4E-77 T 15-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 Trad_0480 dbd665d03f2bf779dfb08aa99ca1fc72 236 SUPERFAMILY SSF54211 4 180 1.16E-34 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Trad_0945 e35de7ca7f61af91423233684de7415a 393 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 16 375 1.2E-114 T 15-10-2018 IPR017439 Amidohydrolase GO:0016787 Trad_0945 e35de7ca7f61af91423233684de7415a 393 Gene3D G3DSA:3.40.630.10 16 372 1.1E-135 T 15-10-2018 Trad_0945 e35de7ca7f61af91423233684de7415a 393 Gene3D G3DSA:3.30.70.360 181 295 1.1E-135 T 15-10-2018 Trad_0945 e35de7ca7f61af91423233684de7415a 393 SUPERFAMILY SSF53187 7 387 2.33E-82 T 15-10-2018 Trad_0945 e35de7ca7f61af91423233684de7415a 393 PIRSF PIRSF005962 4 391 4.6E-127 T 15-10-2018 IPR017439 Amidohydrolase GO:0016787 Trad_0945 e35de7ca7f61af91423233684de7415a 393 Pfam PF01546 Peptidase family M20/M25/M40 72 383 5.6E-34 T 15-10-2018 IPR002933 Peptidase M20 GO:0016787 Trad_0945 e35de7ca7f61af91423233684de7415a 393 Pfam PF07687 Peptidase dimerisation domain 185 268 5.8E-12 T 15-10-2018 IPR011650 Peptidase M20, dimerisation domain Trad_0945 e35de7ca7f61af91423233684de7415a 393 SUPERFAMILY SSF55031 181 299 8.77E-31 T 15-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain Trad_2091 c1cbcbf4342bd531dc6fc1ae80b6c0e1 221 SUPERFAMILY SSF75217 3 185 5.89E-47 T 15-10-2018 IPR029028 Alpha/beta knot methyltransferases Trad_2091 c1cbcbf4342bd531dc6fc1ae80b6c0e1 221 Pfam PF00588 SpoU rRNA Methylase family 21 158 2.7E-31 T 15-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 Trad_2091 c1cbcbf4342bd531dc6fc1ae80b6c0e1 221 Pfam PF12105 SpoU, rRNA methylase, C-terminal 162 214 7.8E-20 T 15-10-2018 IPR022724 RNA methyltransferase, SpoU/TrmH type, C-terminal GO:0009020 Trad_2091 c1cbcbf4342bd531dc6fc1ae80b6c0e1 221 Hamap MF_02060 tRNA (guanosine(18)-2'-O)-methyltransferase [trmH]. 3 194 34.864 T 15-10-2018 IPR033671 tRNA (guanosine(18)-2'-O)-methyltransferase GO:0008168|GO:0030488 Trad_2091 c1cbcbf4342bd531dc6fc1ae80b6c0e1 221 Gene3D G3DSA:3.40.1280.10 1 190 3.0E-62 T 15-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Trad_0555 7babe8eca55d0a96748ebd234688f378 331 PIRSF PIRSF005261 1 297 1.0E-57 T 15-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 Trad_0555 7babe8eca55d0a96748ebd234688f378 331 Gene3D G3DSA:3.55.30.10 1 234 1.6E-68 T 15-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 Trad_0555 7babe8eca55d0a96748ebd234688f378 331 SUPERFAMILY SSF118352 237 291 7.72E-14 T 15-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 Trad_0555 7babe8eca55d0a96748ebd234688f378 331 Pfam PF01430 Hsp33 protein 3 280 4.2E-73 T 15-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 Trad_0555 7babe8eca55d0a96748ebd234688f378 331 Hamap MF_00117 33 kDa chaperonin [hslO]. 1 296 30.521 T 15-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 Trad_0555 7babe8eca55d0a96748ebd234688f378 331 Gene3D G3DSA:3.90.1280.10 236 296 1.8E-11 T 15-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 Trad_0555 7babe8eca55d0a96748ebd234688f378 331 SUPERFAMILY SSF64397 3 245 1.44E-54 T 15-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 Trad_2441 2039c5aa7399e1c82e728d158008d7f6 443 Gene3D G3DSA:3.40.190.10 35 443 1.3E-79 T 15-10-2018 Trad_2441 2039c5aa7399e1c82e728d158008d7f6 443 Pfam PF13416 Bacterial extracellular solute-binding protein 67 380 1.6E-34 T 15-10-2018 IPR006059 Bacterial extracellular solute-binding protein Trad_2441 2039c5aa7399e1c82e728d158008d7f6 443 SUPERFAMILY SSF53850 38 436 1.55E-68 T 15-10-2018 Trad_2184 fdbda86e7e1cb68b37b962ce64eb121a 288 Gene3D G3DSA:1.10.3720.10 14 275 5.1E-60 T 15-10-2018 IPR035906 MetI-like superfamily Trad_2184 fdbda86e7e1cb68b37b962ce64eb121a 288 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 100 281 1.0E-16 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Trad_2184 fdbda86e7e1cb68b37b962ce64eb121a 288 SUPERFAMILY SSF161098 20 288 2.8E-71 T 15-10-2018 IPR035906 MetI-like superfamily Trad_0287 079211173454de9e75462139f9aa0ca0 311 Pfam PF01370 NAD dependent epimerase/dehydratase family 11 139 4.1E-7 T 15-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 Trad_0287 079211173454de9e75462139f9aa0ca0 311 Gene3D G3DSA:3.40.50.720 10 310 1.4E-67 T 15-10-2018 Trad_0287 079211173454de9e75462139f9aa0ca0 311 Pfam PF08338 Domain of unknown function (DUF1731) 262 309 1.5E-17 T 15-10-2018 IPR013549 Domain of unknown function DUF1731 Trad_0287 079211173454de9e75462139f9aa0ca0 311 SUPERFAMILY SSF51735 9 309 2.27E-32 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_0287 079211173454de9e75462139f9aa0ca0 311 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 11 306 6.7E-77 T 15-10-2018 IPR010099 Epimerase family protein SDR39U1 Trad_1186 189c43c5643dbeac86f820f3f50aae0c 402 Gene3D G3DSA:3.40.50.150 186 401 3.7E-56 T 15-10-2018 Trad_1186 189c43c5643dbeac86f820f3f50aae0c 402 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 202 344 2.0E-9 T 15-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 Trad_1186 189c43c5643dbeac86f820f3f50aae0c 402 SUPERFAMILY SSF88697 10 77 1.66E-7 T 15-10-2018 IPR015947 PUA-like superfamily Trad_1186 189c43c5643dbeac86f820f3f50aae0c 402 Gene3D G3DSA:3.30.750.80 82 184 4.6E-29 T 15-10-2018 Trad_1186 189c43c5643dbeac86f820f3f50aae0c 402 Gene3D G3DSA:2.30.130.10 10 77 2.4E-11 T 15-10-2018 IPR036974 PUA domain superfamily GO:0003723 Trad_1186 189c43c5643dbeac86f820f3f50aae0c 402 SUPERFAMILY SSF53335 98 393 1.0E-56 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Trad_2894 50cf9a5a75cb56ab43acaeb7498e90ec 339 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 24 131 4.5E-34 T 15-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Trad_2894 50cf9a5a75cb56ab43acaeb7498e90ec 339 Gene3D G3DSA:3.90.180.10 14 315 3.3E-100 T 15-10-2018 Trad_2894 50cf9a5a75cb56ab43acaeb7498e90ec 339 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 58 72 - T 15-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 Trad_2894 50cf9a5a75cb56ab43acaeb7498e90ec 339 Gene3D G3DSA:3.40.50.720 148 282 3.3E-100 T 15-10-2018 Trad_2894 50cf9a5a75cb56ab43acaeb7498e90ec 339 SUPERFAMILY SSF51735 133 302 9.4E-33 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_2894 50cf9a5a75cb56ab43acaeb7498e90ec 339 SUPERFAMILY SSF50129 6 169 1.11E-50 T 15-10-2018 IPR011032 GroES-like superfamily Trad_2894 50cf9a5a75cb56ab43acaeb7498e90ec 339 Pfam PF00107 Zinc-binding dehydrogenase 170 296 1.8E-22 T 15-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Trad_2195 07a2f4754a3b935dd5e282a6451e5719 379 SUPERFAMILY SSF51905 8 347 7.69E-54 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Trad_2195 07a2f4754a3b935dd5e282a6451e5719 379 Pfam PF01494 FAD binding domain 7 332 4.1E-53 T 15-10-2018 IPR002938 FAD-binding domain GO:0071949 Trad_2195 07a2f4754a3b935dd5e282a6451e5719 379 Gene3D G3DSA:3.50.50.60 9 332 4.9E-79 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Trad_2195 07a2f4754a3b935dd5e282a6451e5719 379 Gene3D G3DSA:3.30.70.2450 184 263 4.9E-79 T 15-10-2018 Trad_2195 07a2f4754a3b935dd5e282a6451e5719 379 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 274 289 6.9E-26 T 15-10-2018 Trad_2195 07a2f4754a3b935dd5e282a6451e5719 379 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 8 30 6.9E-26 T 15-10-2018 Trad_2195 07a2f4754a3b935dd5e282a6451e5719 379 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 155 170 6.9E-26 T 15-10-2018 Trad_2195 07a2f4754a3b935dd5e282a6451e5719 379 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 289 305 6.9E-26 T 15-10-2018 Trad_1086 721f4d32d0ecffedcf58459d9d40342c 294 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 4 280 37.684 T 15-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Trad_1086 721f4d32d0ecffedcf58459d9d40342c 294 Pfam PF01039 Carboxyl transferase domain 105 238 2.0E-16 T 15-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 Trad_1086 721f4d32d0ecffedcf58459d9d40342c 294 SUPERFAMILY SSF52096 24 281 7.82E-78 T 15-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Trad_1086 721f4d32d0ecffedcf58459d9d40342c 294 Gene3D G3DSA:3.90.226.10 24 284 6.6E-82 T 15-10-2018 Trad_1086 721f4d32d0ecffedcf58459d9d40342c 294 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 128 142 1.3E-39 T 15-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Trad_1086 721f4d32d0ecffedcf58459d9d40342c 294 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 250 259 1.3E-39 T 15-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Trad_1086 721f4d32d0ecffedcf58459d9d40342c 294 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 199 216 1.3E-39 T 15-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Trad_1086 721f4d32d0ecffedcf58459d9d40342c 294 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 162 180 1.3E-39 T 15-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Trad_1086 721f4d32d0ecffedcf58459d9d40342c 294 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 228 239 1.3E-39 T 15-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Trad_1086 721f4d32d0ecffedcf58459d9d40342c 294 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 4 278 7.4E-109 T 15-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Trad_2924 b00dec970841b70c12645cb1e600f2fe 266 SUPERFAMILY SSF52540 3 239 1.97E-30 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_2924 b00dec970841b70c12645cb1e600f2fe 266 Gene3D G3DSA:3.40.50.300 2 247 7.7E-34 T 15-10-2018 Trad_2924 b00dec970841b70c12645cb1e600f2fe 266 Pfam PF00685 Sulfotransferase domain 9 242 5.9E-24 T 15-10-2018 IPR000863 Sulfotransferase domain GO:0008146 Trad_0049 d1bd652e79deb92448744446232a3414 188 Pfam PF09988 Uncharacterized metal-binding protein (DUF2227) 2 170 4.6E-41 T 15-10-2018 IPR019250 Protein of unknown function DUF2227, metal-binding Trad_1845 5f3519c66f20286c060f9633c4900b65 356 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 48 142 2.6E-7 T 15-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 Trad_1845 5f3519c66f20286c060f9633c4900b65 356 Gene3D G3DSA:3.40.50.720 25 331 5.5E-119 T 15-10-2018 Trad_1845 5f3519c66f20286c060f9633c4900b65 356 SUPERFAMILY SSF51735 46 169 6.45E-18 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_1845 5f3519c66f20286c060f9633c4900b65 356 Gene3D G3DSA:3.30.360.10 142 332 5.5E-119 T 15-10-2018 Trad_1845 5f3519c66f20286c060f9633c4900b65 356 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 156 229 1.6E-5 T 15-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 Trad_1845 5f3519c66f20286c060f9633c4900b65 356 SUPERFAMILY SSF55347 154 321 3.92E-19 T 15-10-2018 Trad_0324 5df4baa12b37b227080ff5c470ca5e84 102 Pfam PF01192 RNA polymerase Rpb6 9 60 1.8E-8 T 15-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 Trad_0324 5df4baa12b37b227080ff5c470ca5e84 102 Gene3D G3DSA:3.90.940.10 1 88 2.2E-11 T 15-10-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 Trad_0324 5df4baa12b37b227080ff5c470ca5e84 102 SUPERFAMILY SSF63562 1 68 1.57E-10 T 15-10-2018 IPR036161 RPB6/omega subunit-like superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 Trad_0324 5df4baa12b37b227080ff5c470ca5e84 102 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 65 11.222 T 15-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Trad_0324 5df4baa12b37b227080ff5c470ca5e84 102 SMART SM01409 8 64 2.9E-5 T 15-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 Trad_1909 c8c8c19679453aac114bf799f52c0076 322 Gene3D G3DSA:3.40.190.10 61 278 6.0E-47 T 15-10-2018 Trad_1909 c8c8c19679453aac114bf799f52c0076 322 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 61 291 1.5E-53 T 15-10-2018 Trad_1909 c8c8c19679453aac114bf799f52c0076 322 TIGRFAM TIGR01098 3A0109s03R: phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein 51 276 5.4E-61 T 15-10-2018 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein GO:0043190|GO:0055085 Trad_1909 c8c8c19679453aac114bf799f52c0076 322 Gene3D G3DSA:3.40.190.10 144 252 6.0E-47 T 15-10-2018 Trad_1909 c8c8c19679453aac114bf799f52c0076 322 SUPERFAMILY SSF53850 57 315 1.72E-38 T 15-10-2018 Trad_2428 d12ba0e50f5cc0ab6b2fc0e43ff8a7f3 435 SUPERFAMILY SSF51905 18 397 1.01E-32 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Trad_2428 d12ba0e50f5cc0ab6b2fc0e43ff8a7f3 435 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 23 45 9.7E-9 T 15-10-2018 Trad_2428 d12ba0e50f5cc0ab6b2fc0e43ff8a7f3 435 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 284 299 9.7E-9 T 15-10-2018 Trad_2428 d12ba0e50f5cc0ab6b2fc0e43ff8a7f3 435 Gene3D G3DSA:3.50.50.60 23 330 8.3E-19 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Trad_2428 d12ba0e50f5cc0ab6b2fc0e43ff8a7f3 435 Pfam PF05834 Lycopene cyclase protein 23 407 1.4E-94 T 15-10-2018 Trad_2428 d12ba0e50f5cc0ab6b2fc0e43ff8a7f3 435 TIGRFAM TIGR01790 carotene-cycl: lycopene cyclase family protein 23 415 9.5E-119 T 15-10-2018 IPR010108 Lycopene cyclase, beta/epsilon GO:0016117|GO:0016705 Trad_2428 d12ba0e50f5cc0ab6b2fc0e43ff8a7f3 435 Gene3D G3DSA:3.30.9.50 60 277 8.3E-19 T 15-10-2018 Trad_1465 e8b832402d13cb3316dfafc89f383afc 177 SUPERFAMILY SSF55083 16 164 2.35E-46 T 15-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 Trad_1465 e8b832402d13cb3316dfafc89f383afc 177 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 100 111 - T 15-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 Trad_1465 e8b832402d13cb3316dfafc89f383afc 177 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 17 145 8.5E-33 T 15-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 Trad_1465 e8b832402d13cb3316dfafc89f383afc 177 Gene3D G3DSA:3.30.70.560 14 164 1.3E-48 T 15-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 Trad_1465 e8b832402d13cb3316dfafc89f383afc 177 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 16 145 4.5E-38 T 15-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 Trad_0810 0f4e4d1cdf5f271e6f65feb933d571d9 174 Pfam PF03602 Conserved hypothetical protein 95 5 149 9.4E-35 T 15-10-2018 Trad_0810 0f4e4d1cdf5f271e6f65feb933d571d9 174 Gene3D G3DSA:3.40.50.150 1 170 3.7E-43 T 15-10-2018 Trad_0810 0f4e4d1cdf5f271e6f65feb933d571d9 174 SUPERFAMILY SSF53335 5 152 1.06E-39 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Trad_0810 0f4e4d1cdf5f271e6f65feb933d571d9 174 PIRSF PIRSF004553 3 169 2.4E-37 T 15-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 Trad_0358 9b97eec8a4dc43a0dc4766d9ebd1b82c 241 SUPERFAMILY SSF46548 112 238 1.17E-34 T 15-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Trad_0358 9b97eec8a4dc43a0dc4766d9ebd1b82c 241 SUPERFAMILY SSF54292 10 111 3.54E-28 T 15-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Trad_0358 9b97eec8a4dc43a0dc4766d9ebd1b82c 241 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 16 233 1.4E-78 T 15-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 Trad_0358 9b97eec8a4dc43a0dc4766d9ebd1b82c 241 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 14 116 5.2E-35 T 15-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 Trad_0358 9b97eec8a4dc43a0dc4766d9ebd1b82c 241 Pfam PF13183 4Fe-4S dicluster domain 151 223 6.7E-11 T 15-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Trad_0358 9b97eec8a4dc43a0dc4766d9ebd1b82c 241 Gene3D G3DSA:3.10.20.30 2 111 3.8E-35 T 15-10-2018 IPR012675 Beta-grasp domain superfamily Trad_0358 9b97eec8a4dc43a0dc4766d9ebd1b82c 241 Gene3D G3DSA:1.10.1060.10 112 241 1.9E-44 T 15-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Trad_0358 9b97eec8a4dc43a0dc4766d9ebd1b82c 241 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 153 164 - T 15-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Trad_0255 6b25ad735dad623a386dddeadbf729db 555 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 461 481 - T 15-10-2018 IPR018212 Sodium/solute symporter, conserved site Trad_0255 6b25ad735dad623a386dddeadbf729db 555 TIGRFAM TIGR03648 Na_symport_lg: probable sodium:solute symporter, VC_2705 subfamily 9 545 5.1E-242 T 15-10-2018 IPR019899 Sodium/solute symporter, VC2705 subfamily Trad_0255 6b25ad735dad623a386dddeadbf729db 555 Pfam PF00474 Sodium:solute symporter family 364 479 1.4E-21 T 15-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 Trad_0255 6b25ad735dad623a386dddeadbf729db 555 Pfam PF00474 Sodium:solute symporter family 34 294 7.0E-33 T 15-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 Trad_1858 08ecef567eb3691ec880646e89fa5860 416 SUPERFAMILY SSF49452 350 412 2.16E-8 T 15-10-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 Trad_1858 08ecef567eb3691ec880646e89fa5860 416 Pfam PF14326 Domain of unknown function (DUF4384) 59 142 3.5E-25 T 15-10-2018 IPR025493 Domain of unknown function DUF4384 Trad_1858 08ecef567eb3691ec880646e89fa5860 416 Pfam PF08308 PEGA domain 345 412 5.3E-11 T 15-10-2018 IPR013229 PEGA Trad_1858 08ecef567eb3691ec880646e89fa5860 416 Pfam PF08308 PEGA domain 273 339 3.2E-12 T 15-10-2018 IPR013229 PEGA Trad_1858 08ecef567eb3691ec880646e89fa5860 416 Pfam PF08308 PEGA domain 202 268 6.7E-18 T 15-10-2018 IPR013229 PEGA Trad_1858 08ecef567eb3691ec880646e89fa5860 416 Gene3D G3DSA:2.60.40.1120 346 414 1.1E-6 T 15-10-2018 Trad_1160 86fe9b235ce334e0f24f151dd346f47f 312 Gene3D G3DSA:3.40.50.1980 159 308 7.1E-25 T 15-10-2018 Trad_1160 86fe9b235ce334e0f24f151dd346f47f 312 Pfam PF01497 Periplasmic binding protein 60 285 3.3E-24 T 15-10-2018 IPR002491 ABC transporter periplasmic binding domain Trad_1160 86fe9b235ce334e0f24f151dd346f47f 312 SUPERFAMILY SSF53807 32 293 1.14E-49 T 15-10-2018 Trad_1160 86fe9b235ce334e0f24f151dd346f47f 312 Gene3D G3DSA:3.40.50.1980 27 158 7.2E-28 T 15-10-2018 Trad_0754 4806c6f1e5b0949596d071ea01a5eada 212 Pfam PF02163 Peptidase family M50 118 169 1.2E-8 T 15-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 Trad_2338 cacb262d975bef86260d59098a92481e 883 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 701 715 - T 15-10-2018 IPR001482 Type II/IV secretion system protein Trad_2338 cacb262d975bef86260d59098a92481e 883 SUPERFAMILY SSF160246 162 296 2.17E-24 T 15-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily Trad_2338 cacb262d975bef86260d59098a92481e 883 Gene3D G3DSA:3.30.300.160 392 468 2.2E-11 T 15-10-2018 Trad_2338 cacb262d975bef86260d59098a92481e 883 Gene3D G3DSA:3.30.300.160 65 145 1.2E-5 T 15-10-2018 Trad_2338 cacb262d975bef86260d59098a92481e 883 Gene3D G3DSA:3.40.50.300 608 883 1.8E-116 T 15-10-2018 Trad_2338 cacb262d975bef86260d59098a92481e 883 SUPERFAMILY SSF160246 8 145 1.52E-32 T 15-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily Trad_2338 cacb262d975bef86260d59098a92481e 883 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 44 147 3.3E-16 T 15-10-2018 IPR007831 General secretory system II, protein E, N-terminal Trad_2338 cacb262d975bef86260d59098a92481e 883 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 367 471 1.2E-20 T 15-10-2018 IPR007831 General secretory system II, protein E, N-terminal Trad_2338 cacb262d975bef86260d59098a92481e 883 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 197 300 9.0E-15 T 15-10-2018 IPR007831 General secretory system II, protein E, N-terminal Trad_2338 cacb262d975bef86260d59098a92481e 883 Gene3D G3DSA:3.30.450.90 469 606 4.2E-42 T 15-10-2018 Trad_2338 cacb262d975bef86260d59098a92481e 883 SUPERFAMILY SSF160246 331 467 6.15E-36 T 15-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily Trad_2338 cacb262d975bef86260d59098a92481e 883 Pfam PF00437 Type II/IV secretion system protein 509 773 2.9E-78 T 15-10-2018 IPR001482 Type II/IV secretion system protein Trad_2338 cacb262d975bef86260d59098a92481e 883 SUPERFAMILY SSF52540 493 879 2.22E-97 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_2914 2a6eb257dc4133f6174e70b67378990a 486 SUPERFAMILY SSF53383 79 457 7.08E-86 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Trad_2914 2a6eb257dc4133f6174e70b67378990a 486 Pfam PF00202 Aminotransferase class-III 73 456 4.4E-70 T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Trad_2914 2a6eb257dc4133f6174e70b67378990a 486 Gene3D G3DSA:3.40.640.10 90 348 1.2E-96 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Trad_2914 2a6eb257dc4133f6174e70b67378990a 486 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 261 298 - T 15-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Trad_2914 2a6eb257dc4133f6174e70b67378990a 486 Gene3D G3DSA:3.90.1150.10 68 456 1.2E-96 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Trad_2964 34fe312b29126a3a0d7b3ca602cb005d 220 Gene3D G3DSA:3.40.50.10420 44 216 2.5E-56 T 15-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily Trad_2964 34fe312b29126a3a0d7b3ca602cb005d 220 Pfam PF02589 LUD domain 55 216 4.9E-20 T 15-10-2018 IPR003741 LUD domain Trad_2964 34fe312b29126a3a0d7b3ca602cb005d 220 SUPERFAMILY SSF100950 48 216 1.88E-37 T 15-10-2018 IPR037171 NagB/RpiA transferase-like Trad_2992 cdbad988570f140e9d5e368893adc1da 252 Pfam PF13614 AAA domain 3 174 5.3E-53 T 15-10-2018 IPR025669 AAA domain Trad_2992 cdbad988570f140e9d5e368893adc1da 252 PIRSF PIRSF009320 87 252 2.6E-11 T 15-10-2018 Trad_2992 cdbad988570f140e9d5e368893adc1da 252 PIRSF PIRSF009320 1 73 4.3E-15 T 15-10-2018 Trad_2992 cdbad988570f140e9d5e368893adc1da 252 Gene3D G3DSA:3.40.50.300 2 252 1.9E-78 T 15-10-2018 Trad_2992 cdbad988570f140e9d5e368893adc1da 252 SUPERFAMILY SSF52540 3 249 2.13E-63 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_2540 f08233aaae23940fd41331ebd09e618b 624 SMART SM00382 406 592 2.1E-20 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_2540 f08233aaae23940fd41331ebd09e618b 624 Pfam PF00664 ABC transporter transmembrane region 45 316 9.6E-56 T 15-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Trad_2540 f08233aaae23940fd41331ebd09e618b 624 Gene3D G3DSA:3.40.50.300 357 622 3.4E-96 T 15-10-2018 Trad_2540 f08233aaae23940fd41331ebd09e618b 624 SUPERFAMILY SSF52540 356 617 1.6E-93 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_2540 f08233aaae23940fd41331ebd09e618b 624 SUPERFAMILY SSF90123 31 348 1.12E-81 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Trad_2540 f08233aaae23940fd41331ebd09e618b 624 ProSitePatterns PS00211 ABC transporters family signature. 518 532 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Trad_2540 f08233aaae23940fd41331ebd09e618b 624 Pfam PF00005 ABC transporter 397 546 9.4E-39 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Trad_2540 f08233aaae23940fd41331ebd09e618b 624 Gene3D G3DSA:1.20.1560.10 25 351 7.1E-92 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Trad_1680 fbe6c0eea9b63bbae6b4574b5b2dc585 106 Pfam PF03334 Na+/H+ antiporter subunit 14 92 7.2E-26 T 15-10-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:1902600 Trad_1680 fbe6c0eea9b63bbae6b4574b5b2dc585 106 TIGRFAM TIGR01300 CPA3_mnhG_phaG: monovalent cation/proton antiporter, MnhG/PhaG subunit 14 100 3.0E-20 T 15-10-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:1902600 Trad_0652 961554dd9e56189c3d0e798438cfa2b4 508 Pfam PF13426 PAS domain 305 401 8.2E-9 T 15-10-2018 IPR000014 PAS domain Trad_0652 961554dd9e56189c3d0e798438cfa2b4 508 SMART SM00091 159 225 4.5E-8 T 15-10-2018 IPR000014 PAS domain Trad_0652 961554dd9e56189c3d0e798438cfa2b4 508 SMART SM00091 31 98 5.3E-8 T 15-10-2018 IPR000014 PAS domain Trad_0652 961554dd9e56189c3d0e798438cfa2b4 508 SMART SM00091 285 353 0.0012 T 15-10-2018 IPR000014 PAS domain Trad_0652 961554dd9e56189c3d0e798438cfa2b4 508 SMART SM00421 444 501 5.7E-24 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Trad_0652 961554dd9e56189c3d0e798438cfa2b4 508 Gene3D G3DSA:3.30.450.20 159 270 9.9E-30 T 15-10-2018 Trad_0652 961554dd9e56189c3d0e798438cfa2b4 508 SUPERFAMILY SSF55785 39 145 3.89E-15 T 15-10-2018 IPR035965 PAS domain superfamily Trad_0652 961554dd9e56189c3d0e798438cfa2b4 508 Gene3D G3DSA:1.10.10.10 401 507 2.3E-27 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Trad_0652 961554dd9e56189c3d0e798438cfa2b4 508 ProSitePatterns PS00622 LuxR-type HTH domain signature. 461 488 - T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Trad_0652 961554dd9e56189c3d0e798438cfa2b4 508 SUPERFAMILY SSF55785 150 270 2.27E-26 T 15-10-2018 IPR035965 PAS domain superfamily Trad_0652 961554dd9e56189c3d0e798438cfa2b4 508 Gene3D G3DSA:3.30.450.20 37 158 1.2E-15 T 15-10-2018 Trad_0652 961554dd9e56189c3d0e798438cfa2b4 508 SMART SM00086 231 273 5.8E-9 T 15-10-2018 IPR001610 PAC motif Trad_0652 961554dd9e56189c3d0e798438cfa2b4 508 SMART SM00086 362 402 0.012 T 15-10-2018 IPR001610 PAC motif Trad_0652 961554dd9e56189c3d0e798438cfa2b4 508 SMART SM00086 110 149 520.0 T 15-10-2018 IPR001610 PAC motif Trad_0652 961554dd9e56189c3d0e798438cfa2b4 508 SUPERFAMILY SSF55785 272 400 3.66E-21 T 15-10-2018 IPR035965 PAS domain superfamily Trad_0652 961554dd9e56189c3d0e798438cfa2b4 508 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 47 145 2.9E-11 T 15-10-2018 IPR000014 PAS domain Trad_0652 961554dd9e56189c3d0e798438cfa2b4 508 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 281 409 3.5E-16 T 15-10-2018 IPR000014 PAS domain Trad_0652 961554dd9e56189c3d0e798438cfa2b4 508 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 156 280 5.8E-22 T 15-10-2018 IPR000014 PAS domain Trad_0652 961554dd9e56189c3d0e798438cfa2b4 508 Pfam PF08447 PAS fold 55 132 1.4E-9 T 15-10-2018 IPR013655 PAS fold-3 GO:0005515 Trad_0652 961554dd9e56189c3d0e798438cfa2b4 508 Pfam PF08447 PAS fold 185 266 8.4E-17 T 15-10-2018 IPR013655 PAS fold-3 GO:0005515 Trad_0652 961554dd9e56189c3d0e798438cfa2b4 508 Gene3D G3DSA:3.30.450.20 271 400 5.0E-18 T 15-10-2018 Trad_0652 961554dd9e56189c3d0e798438cfa2b4 508 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 447 461 2.7E-10 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Trad_0652 961554dd9e56189c3d0e798438cfa2b4 508 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 461 477 2.7E-10 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Trad_0652 961554dd9e56189c3d0e798438cfa2b4 508 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 477 489 2.7E-10 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Trad_0652 961554dd9e56189c3d0e798438cfa2b4 508 SUPERFAMILY SSF46894 435 507 1.39E-20 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Trad_0652 961554dd9e56189c3d0e798438cfa2b4 508 Pfam PF00196 Bacterial regulatory proteins, luxR family 446 501 5.6E-20 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Trad_0194 5ee0455173ed7bef432b14287aca3df2 354 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 31 318 1.3E-44 T 15-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 Trad_0194 5ee0455173ed7bef432b14287aca3df2 354 Gene3D G3DSA:3.40.190.170 28 334 3.7E-107 T 15-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily Trad_0194 5ee0455173ed7bef432b14287aca3df2 354 Gene3D G3DSA:3.40.190.10 150 320 3.7E-107 T 15-10-2018 Trad_0194 5ee0455173ed7bef432b14287aca3df2 354 PIRSF PIRSF039026 1 354 4.4E-108 T 15-10-2018 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like Trad_0194 5ee0455173ed7bef432b14287aca3df2 354 SUPERFAMILY SSF53850 118 268 2.95E-6 T 15-10-2018 Trad_1273 e42dc56fcbfe8d63275d82dc14a1dd39 145 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 1 144 1.1E-54 T 15-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 Trad_1273 e42dc56fcbfe8d63275d82dc14a1dd39 145 Gene3D G3DSA:3.50.80.10 1 145 2.3E-54 T 15-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily Trad_1273 e42dc56fcbfe8d63275d82dc14a1dd39 145 SUPERFAMILY SSF69500 1 144 1.44E-55 T 15-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily Trad_1273 e42dc56fcbfe8d63275d82dc14a1dd39 145 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 145 36.118 T 15-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 Trad_1273 e42dc56fcbfe8d63275d82dc14a1dd39 145 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 2 144 6.7E-55 T 15-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 Trad_0083 c90f7d9e8db0a2bf0810a4dea4ecf865 281 Pfam PF00977 Histidine biosynthesis protein 20 255 1.6E-78 T 15-10-2018 IPR006062 Histidine biosynthesis GO:0000105 Trad_0083 c90f7d9e8db0a2bf0810a4dea4ecf865 281 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 17 272 5.8E-103 T 15-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 Trad_0083 c90f7d9e8db0a2bf0810a4dea4ecf865 281 Gene3D G3DSA:3.20.20.70 15 280 6.8E-101 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Trad_0083 c90f7d9e8db0a2bf0810a4dea4ecf865 281 SUPERFAMILY SSF51366 17 273 7.85E-74 T 15-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Trad_0083 c90f7d9e8db0a2bf0810a4dea4ecf865 281 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 16 272 45.242 T 15-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 Trad_2614 518d0aa5544c6c6c7ef245d643ab305b 333 Pfam PF00005 ABC transporter 19 160 1.4E-37 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Trad_2614 518d0aa5544c6c6c7ef245d643ab305b 333 SUPERFAMILY SSF52540 3 240 7.92E-82 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_2614 518d0aa5544c6c6c7ef245d643ab305b 333 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Trad_2614 518d0aa5544c6c6c7ef245d643ab305b 333 SMART SM00382 27 210 4.2E-18 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_2614 518d0aa5544c6c6c7ef245d643ab305b 333 Gene3D G3DSA:3.40.50.300 2 262 2.3E-74 T 15-10-2018 Trad_1555 4d16bd785bd5443f392e06c37566fe6b 264 SMART SM01211 33 260 7.2E-136 T 15-10-2018 Trad_1555 4d16bd785bd5443f392e06c37566fe6b 264 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 35 243 6.3E-51 T 15-10-2018 Trad_1555 4d16bd785bd5443f392e06c37566fe6b 264 TIGRFAM TIGR01737 FGAM_synth_I: phosphoribosylformylglycinamidine synthase I 35 258 1.3E-95 T 15-10-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 Trad_1555 4d16bd785bd5443f392e06c37566fe6b 264 Gene3D G3DSA:3.40.50.880 33 261 2.2E-71 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like Trad_1555 4d16bd785bd5443f392e06c37566fe6b 264 Hamap MF_00421 Phosphoribosylformylglycinamidine synthase subunit PurQ [purQ]. 34 258 44.555 T 15-10-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 Trad_1555 4d16bd785bd5443f392e06c37566fe6b 264 SUPERFAMILY SSF52317 32 258 7.64E-79 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like Trad_1555 4d16bd785bd5443f392e06c37566fe6b 264 PIRSF PIRSF001586 32 263 5.0E-85 T 15-10-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 Trad_2750 f2ee7f51228b8e9d78e0dcb45b1d6a32 333 Gene3D G3DSA:3.50.50.60 8 327 4.0E-100 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Trad_2750 f2ee7f51228b8e9d78e0dcb45b1d6a32 333 Pfam PF13450 NAD(P)-binding Rossmann-like domain 10 67 5.4E-16 T 15-10-2018 Trad_2750 f2ee7f51228b8e9d78e0dcb45b1d6a32 333 PRINTS PR00419 Adrenodoxin reductase family signature 7 29 4.2E-5 T 15-10-2018 Trad_2750 f2ee7f51228b8e9d78e0dcb45b1d6a32 333 PRINTS PR00419 Adrenodoxin reductase family signature 30 43 4.2E-5 T 15-10-2018 Trad_2750 f2ee7f51228b8e9d78e0dcb45b1d6a32 333 Gene3D G3DSA:3.90.660.10 46 293 4.0E-100 T 15-10-2018 Trad_2750 f2ee7f51228b8e9d78e0dcb45b1d6a32 333 Pfam PF01593 Flavin containing amine oxidoreductase 113 328 2.6E-13 T 15-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 Trad_2750 f2ee7f51228b8e9d78e0dcb45b1d6a32 333 SUPERFAMILY SSF51905 4 328 1.08E-36 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Trad_2618 289223187d7db334395bd0d2c6706fa0 398 Gene3D G3DSA:3.40.190.10 23 357 3.9E-87 T 15-10-2018 Trad_2618 289223187d7db334395bd0d2c6706fa0 398 SUPERFAMILY SSF53850 19 393 3.26E-76 T 15-10-2018 Trad_2618 289223187d7db334395bd0d2c6706fa0 398 Pfam PF13416 Bacterial extracellular solute-binding protein 36 343 1.0E-40 T 15-10-2018 IPR006059 Bacterial extracellular solute-binding protein Trad_2618 289223187d7db334395bd0d2c6706fa0 398 Gene3D G3DSA:3.40.190.10 135 392 3.9E-87 T 15-10-2018 Trad_2466 185e0dcb034e7ad3ffeb7ad9ad26ec82 338 Pfam PF13416 Bacterial extracellular solute-binding protein 35 295 1.4E-31 T 15-10-2018 IPR006059 Bacterial extracellular solute-binding protein Trad_2466 185e0dcb034e7ad3ffeb7ad9ad26ec82 338 Gene3D G3DSA:3.40.190.10 124 334 1.3E-99 T 15-10-2018 Trad_2466 185e0dcb034e7ad3ffeb7ad9ad26ec82 338 SUPERFAMILY SSF53850 19 337 2.08E-84 T 15-10-2018 Trad_2466 185e0dcb034e7ad3ffeb7ad9ad26ec82 338 Gene3D G3DSA:3.40.190.10 22 310 1.3E-99 T 15-10-2018 Trad_2466 185e0dcb034e7ad3ffeb7ad9ad26ec82 338 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 197 216 2.4E-35 T 15-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 Trad_2466 185e0dcb034e7ad3ffeb7ad9ad26ec82 338 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 286 312 2.4E-35 T 15-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 Trad_2466 185e0dcb034e7ad3ffeb7ad9ad26ec82 338 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 68 82 2.4E-35 T 15-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 Trad_2466 185e0dcb034e7ad3ffeb7ad9ad26ec82 338 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 241 260 2.4E-35 T 15-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 Trad_2466 185e0dcb034e7ad3ffeb7ad9ad26ec82 338 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 84 97 2.4E-35 T 15-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 Trad_2466 185e0dcb034e7ad3ffeb7ad9ad26ec82 338 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 160 179 2.4E-35 T 15-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 Trad_2466 185e0dcb034e7ad3ffeb7ad9ad26ec82 338 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 25 41 2.4E-35 T 15-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 Trad_2466 185e0dcb034e7ad3ffeb7ad9ad26ec82 338 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 41 62 2.4E-35 T 15-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 Trad_2466 185e0dcb034e7ad3ffeb7ad9ad26ec82 338 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 115 131 2.4E-35 T 15-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 Trad_2466 185e0dcb034e7ad3ffeb7ad9ad26ec82 338 PIRSF PIRSF019574 2 338 3.9E-96 T 15-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 Trad_0038 e652dcfce99fde3aea4641fdf5dc382e 222 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 168 200 1.5E-5 T 15-10-2018 IPR001451 Hexapeptide repeat Trad_0038 e652dcfce99fde3aea4641fdf5dc382e 222 Gene3D G3DSA:2.160.10.10 25 210 5.2E-38 T 15-10-2018 Trad_0038 e652dcfce99fde3aea4641fdf5dc382e 222 SUPERFAMILY SSF51161 48 208 9.19E-29 T 15-10-2018 IPR011004 Trimeric LpxA-like superfamily Trad_0038 e652dcfce99fde3aea4641fdf5dc382e 222 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 66 94 - T 15-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 Trad_1288 bde3dbf749aaea5b78465091bc852cdc 219 Gene3D G3DSA:3.40.50.1240 1 212 1.1E-22 T 15-10-2018 IPR029033 Histidine phosphatase superfamily Trad_1288 bde3dbf749aaea5b78465091bc852cdc 219 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 87 1.7E-13 T 15-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Trad_1288 bde3dbf749aaea5b78465091bc852cdc 219 SMART SM00855 2 186 4.7E-10 T 15-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Trad_1288 bde3dbf749aaea5b78465091bc852cdc 219 SUPERFAMILY SSF53254 2 201 8.84E-22 T 15-10-2018 IPR029033 Histidine phosphatase superfamily Trad_2696 4b579a87f2776a5b32657a920aa4773b 343 Pfam PF00753 Metallo-beta-lactamase superfamily 68 264 2.2E-33 T 15-10-2018 IPR001279 Metallo-beta-lactamase Trad_2696 4b579a87f2776a5b32657a920aa4773b 343 Gene3D G3DSA:3.60.15.10 19 289 5.3E-39 T 15-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Trad_2696 4b579a87f2776a5b32657a920aa4773b 343 SMART SM00849 55 264 1.0E-30 T 15-10-2018 IPR001279 Metallo-beta-lactamase Trad_2696 4b579a87f2776a5b32657a920aa4773b 343 SUPERFAMILY SSF56281 66 285 2.1E-44 T 15-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Trad_1591 7b79ed1b2dc537b573b612da100e3912 176 PIRSF PIRSF006160 18 176 1.0E-57 T 15-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 Trad_1591 7b79ed1b2dc537b573b612da100e3912 176 Gene3D G3DSA:3.30.1360.80 16 176 2.1E-56 T 15-10-2018 IPR037005 S-ribosylhomocysteinase (LuxS) superfamily GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 Trad_1591 7b79ed1b2dc537b573b612da100e3912 176 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 22 40 1.2E-39 T 15-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 Trad_1591 7b79ed1b2dc537b573b612da100e3912 176 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 95 113 1.2E-39 T 15-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 Trad_1591 7b79ed1b2dc537b573b612da100e3912 176 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 45 63 1.2E-39 T 15-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 Trad_1591 7b79ed1b2dc537b573b612da100e3912 176 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 137 156 1.2E-39 T 15-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 Trad_1591 7b79ed1b2dc537b573b612da100e3912 176 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 66 84 1.2E-39 T 15-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 Trad_1591 7b79ed1b2dc537b573b612da100e3912 176 Hamap MF_00091 S-ribosylhomocysteine lyase [luxS]. 18 175 35.436 T 15-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 Trad_1591 7b79ed1b2dc537b573b612da100e3912 176 Pfam PF02664 S-Ribosylhomocysteinase (LuxS) 21 169 2.2E-53 T 15-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 Trad_1591 7b79ed1b2dc537b573b612da100e3912 176 SUPERFAMILY SSF63411 21 172 1.19E-54 T 15-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 Trad_1591 7b79ed1b2dc537b573b612da100e3912 176 ProDom PD013172 LYASE SYNTHESIS LUXS AUTOINDUCER-2 PRODUCTION AUTOINDUCER S-RIBOSYLHOMOCYSTEINE AI-2 QUORUM SENSING 26 163 3.0E-34 T 15-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 Trad_1561 c4c88aaa03f8db2e704ee862564a4144 369 SUPERFAMILY SSF51971 5 366 5.65E-49 T 15-10-2018 Trad_1561 c4c88aaa03f8db2e704ee862564a4144 369 SUPERFAMILY SSF54373 249 316 1.63E-13 T 15-10-2018 Trad_1561 c4c88aaa03f8db2e704ee862564a4144 369 Pfam PF13450 NAD(P)-binding Rossmann-like domain 9 76 1.4E-15 T 15-10-2018 Trad_1561 c4c88aaa03f8db2e704ee862564a4144 369 Pfam PF03275 UDP-galactopyranose mutase 150 349 1.4E-72 T 15-10-2018 IPR015899 UDP-galactopyranose mutase, C-terminal GO:0008767 KEGG: 00052+5.4.99.9|KEGG: 00520+5.4.99.9|MetaCyc: PWY-6397|MetaCyc: PWY-7328|MetaCyc: PWY-7622 Trad_1561 c4c88aaa03f8db2e704ee862564a4144 369 Gene3D G3DSA:3.40.50.720 158 263 1.5E-28 T 15-10-2018 Trad_1561 c4c88aaa03f8db2e704ee862564a4144 369 Gene3D G3DSA:3.40.50.720 264 369 2.2E-18 T 15-10-2018 Trad_1561 c4c88aaa03f8db2e704ee862564a4144 369 Gene3D G3DSA:3.40.50.720 2 91 5.3E-32 T 15-10-2018 Trad_1561 c4c88aaa03f8db2e704ee862564a4144 369 TIGRFAM TIGR00031 UDP-GALP_mutase: UDP-galactopyranose mutase 5 364 6.3E-114 T 15-10-2018 IPR004379 UDP-galactopyranose mutase GO:0008767 KEGG: 00052+5.4.99.9|KEGG: 00520+5.4.99.9|MetaCyc: PWY-6397|MetaCyc: PWY-7328|MetaCyc: PWY-7622 Trad_2265 46c6bafcc7511c6ad765d4c0a2b46da6 169 Pfam PF01878 EVE domain 6 153 1.6E-48 T 15-10-2018 IPR002740 EVE domain Trad_2265 46c6bafcc7511c6ad765d4c0a2b46da6 169 Gene3D G3DSA:3.10.590.10 1 158 2.2E-56 T 15-10-2018 Trad_2265 46c6bafcc7511c6ad765d4c0a2b46da6 169 SUPERFAMILY SSF88697 4 155 1.49E-55 T 15-10-2018 IPR015947 PUA-like superfamily Trad_0370 0e035a057a964db68d12980b920db3a6 562 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 328 503 6.5E-55 T 15-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_0370 0e035a057a964db68d12980b920db3a6 562 Pfam PF02096 60Kd inner membrane protein 329 503 1.4E-52 T 15-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Trad_0370 0e035a057a964db68d12980b920db3a6 562 PRINTS PR00701 60kDa inner membrane protein signature 390 413 3.0E-12 T 15-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Trad_0370 0e035a057a964db68d12980b920db3a6 562 PRINTS PR00701 60kDa inner membrane protein signature 469 492 3.0E-12 T 15-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Trad_0370 0e035a057a964db68d12980b920db3a6 562 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 1 505 14.965 T 15-10-2018 IPR019998 Membrane insertase YidC GO:0016021|GO:0032977 Trad_2910 47142abf82a2db5f9975ef9b597154fa 347 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 157 345 2.8E-35 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Trad_2910 47142abf82a2db5f9975ef9b597154fa 347 Gene3D G3DSA:1.10.3720.10 132 340 2.2E-20 T 15-10-2018 IPR035906 MetI-like superfamily Trad_2910 47142abf82a2db5f9975ef9b597154fa 347 SUPERFAMILY SSF161098 135 329 2.62E-25 T 15-10-2018 IPR035906 MetI-like superfamily Trad_2910 47142abf82a2db5f9975ef9b597154fa 347 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 26 59 4.7E-9 T 15-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain Trad_0091 7f21df19a4c941d441a49a366b5145f0 198 Pfam PF14278 Transcriptional regulator C-terminal region 98 168 2.4E-6 T 15-10-2018 IPR039532 Transcriptional regulator TetR, C-terminal, Firmicutes type Trad_0091 7f21df19a4c941d441a49a366b5145f0 198 Pfam PF00440 Bacterial regulatory proteins, tetR family 31 72 8.3E-13 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Trad_0091 7f21df19a4c941d441a49a366b5145f0 198 SUPERFAMILY SSF46689 17 84 1.65E-16 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Trad_0091 7f21df19a4c941d441a49a366b5145f0 198 Gene3D G3DSA:1.10.357.10 15 184 1.1E-30 T 15-10-2018 Trad_0091 7f21df19a4c941d441a49a366b5145f0 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 47 70 7.5E-6 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Trad_0091 7f21df19a4c941d441a49a366b5145f0 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 26 39 7.5E-6 T 15-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Trad_0707 81bfc2895fef4fd770941cb6b6c92671 97 Pfam PF04024 PspC domain 40 96 9.5E-15 T 15-10-2018 IPR007168 Phage shock protein, PspC, N-terminal Trad_1995 09a6346a440c592976fc5d049bb0b940 306 Pfam PF08379 Bacterial transglutaminase-like N-terminal region 39 108 9.3E-10 T 15-10-2018 IPR013589 Bacterial transglutaminase-like, N-terminal Trad_1995 09a6346a440c592976fc5d049bb0b940 306 SUPERFAMILY SSF54001 141 277 2.38E-33 T 15-10-2018 IPR038765 Papain-like cysteine peptidase superfamily Trad_1995 09a6346a440c592976fc5d049bb0b940 306 Pfam PF01841 Transglutaminase-like superfamily 145 240 2.1E-19 T 15-10-2018 IPR002931 Transglutaminase-like Trad_1995 09a6346a440c592976fc5d049bb0b940 306 Gene3D G3DSA:3.10.620.30 107 280 1.3E-45 T 15-10-2018 Trad_1995 09a6346a440c592976fc5d049bb0b940 306 SMART SM00460 188 250 9.0E-12 T 15-10-2018 IPR002931 Transglutaminase-like Trad_1641 d8069f544df6a06521fce59b27ede354 579 Pfam PF09992 Phosphodiester glycosidase 427 559 1.8E-20 T 15-10-2018 IPR018711 Phosphodiester glycosidase Trad_0951 600f85e10ce139cd33b5031c1045ee02 442 SUPERFAMILY SSF53756 8 405 1.84E-26 T 15-10-2018 Trad_0951 600f85e10ce139cd33b5031c1045ee02 442 Gene3D G3DSA:3.40.50.2000 208 409 1.3E-20 T 15-10-2018 Trad_0951 600f85e10ce139cd33b5031c1045ee02 442 Pfam PF00534 Glycosyl transferases group 1 215 390 2.5E-9 T 15-10-2018 IPR001296 Glycosyl transferase, family 1 Trad_1328 f6af180051ce29c29a7986063a75d720 192 Gene3D G3DSA:3.40.50.300 17 191 1.2E-48 T 15-10-2018 Trad_1328 f6af180051ce29c29a7986063a75d720 192 PRINTS PR01100 Shikimate kinase family signature 42 55 1.5E-16 T 15-10-2018 Trad_1328 f6af180051ce29c29a7986063a75d720 192 PRINTS PR01100 Shikimate kinase family signature 109 126 1.5E-16 T 15-10-2018 Trad_1328 f6af180051ce29c29a7986063a75d720 192 PRINTS PR01100 Shikimate kinase family signature 70 78 1.5E-16 T 15-10-2018 Trad_1328 f6af180051ce29c29a7986063a75d720 192 PRINTS PR01100 Shikimate kinase family signature 88 97 1.5E-16 T 15-10-2018 Trad_1328 f6af180051ce29c29a7986063a75d720 192 PRINTS PR01100 Shikimate kinase family signature 18 33 1.5E-16 T 15-10-2018 Trad_1328 f6af180051ce29c29a7986063a75d720 192 SUPERFAMILY SSF52540 18 178 3.2E-24 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_1328 f6af180051ce29c29a7986063a75d720 192 Pfam PF01202 Shikimate kinase 24 179 2.0E-43 T 15-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 Trad_1328 f6af180051ce29c29a7986063a75d720 192 Hamap MF_00109 Shikimate kinase [aroK]. 15 180 26.505 T 15-10-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 Trad_1328 f6af180051ce29c29a7986063a75d720 192 ProSitePatterns PS01128 Shikimate kinase signature. 71 96 - T 15-10-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 Trad_2804 28b0e448fc9c897a7f97bb010dfef99d 203 Gene3D G3DSA:1.20.120.80 19 202 2.8E-56 T 15-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Trad_2804 28b0e448fc9c897a7f97bb010dfef99d 203 SUPERFAMILY SSF81452 12 200 2.62E-53 T 15-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Trad_2804 28b0e448fc9c897a7f97bb010dfef99d 203 Pfam PF00510 Cytochrome c oxidase subunit III 25 199 1.8E-17 T 15-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Trad_0095 fe7e1b9bd954beb8dc8a0ae821aae96f 99 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 14 96 3.6E-33 T 15-10-2018 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 Trad_1713 833b45817365a3ba0c5345ee58c4af06 500 SUPERFAMILY SSF53067 14 252 2.41E-46 T 15-10-2018 Trad_1713 833b45817365a3ba0c5345ee58c4af06 500 Gene3D G3DSA:3.30.420.40 248 498 1.7E-95 T 15-10-2018 Trad_1713 833b45817365a3ba0c5345ee58c4af06 500 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 15 253 5.6E-28 T 15-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 Trad_1713 833b45817365a3ba0c5345ee58c4af06 500 Gene3D G3DSA:3.30.420.40 10 247 1.0E-80 T 15-10-2018 Trad_1713 833b45817365a3ba0c5345ee58c4af06 500 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 264 455 6.9E-33 T 15-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 Trad_1713 833b45817365a3ba0c5345ee58c4af06 500 SUPERFAMILY SSF53067 263 493 1.1E-35 T 15-10-2018 Trad_2380 150f303e679f6d99233eccef771cc2eb 402 Gene3D G3DSA:3.40.50.200 90 402 1.8E-64 T 15-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Trad_2380 150f303e679f6d99233eccef771cc2eb 402 Pfam PF00082 Subtilase family 106 380 5.6E-36 T 15-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 Trad_2380 150f303e679f6d99233eccef771cc2eb 402 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 146 156 - T 15-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site Trad_2380 150f303e679f6d99233eccef771cc2eb 402 SUPERFAMILY SSF52743 92 401 1.06E-61 T 15-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Trad_2380 150f303e679f6d99233eccef771cc2eb 402 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 111 122 - T 15-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site Trad_2380 150f303e679f6d99233eccef771cc2eb 402 PRINTS PR00723 Subtilisin serine protease family (S8) signature 106 125 2.0E-22 T 15-10-2018 IPR015500 Peptidase S8, subtilisin-related Trad_2380 150f303e679f6d99233eccef771cc2eb 402 PRINTS PR00723 Subtilisin serine protease family (S8) signature 142 155 2.0E-22 T 15-10-2018 IPR015500 Peptidase S8, subtilisin-related Trad_2380 150f303e679f6d99233eccef771cc2eb 402 PRINTS PR00723 Subtilisin serine protease family (S8) signature 340 356 2.0E-22 T 15-10-2018 IPR015500 Peptidase S8, subtilisin-related Trad_2380 150f303e679f6d99233eccef771cc2eb 402 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 341 351 - T 15-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site Trad_0928 361dc770d7bb78910310527e2f5a6557 138 Gene3D G3DSA:1.10.260.40 75 138 6.2E-11 T 15-10-2018 Trad_0928 361dc770d7bb78910310527e2f5a6557 138 SUPERFAMILY SSF47413 79 137 5.07E-9 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Trad_0928 361dc770d7bb78910310527e2f5a6557 138 Pfam PF01381 Helix-turn-helix 86 136 2.5E-9 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Trad_0928 361dc770d7bb78910310527e2f5a6557 138 SMART SM00530 82 137 6.9E-6 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Trad_1542 d766e0d651ec7aa04fd609f72f8a1c28 955 Gene3D G3DSA:1.25.40.10 419 730 6.3E-15 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Trad_1542 d766e0d651ec7aa04fd609f72f8a1c28 955 SMART SM00028 534 567 69.0 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Trad_1542 d766e0d651ec7aa04fd609f72f8a1c28 955 SMART SM00028 645 678 0.031 T 15-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Trad_1542 d766e0d651ec7aa04fd609f72f8a1c28 955 SUPERFAMILY SSF48452 499 677 2.42E-11 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Trad_0075 976b621df2f4faba3bc3464fae4d9373 641 Pfam PF13624 SurA N-terminal domain 5 154 2.1E-13 T 15-10-2018 Trad_0075 976b621df2f4faba3bc3464fae4d9373 641 SUPERFAMILY SSF54534 186 280 4.19E-12 T 15-10-2018 Trad_0075 976b621df2f4faba3bc3464fae4d9373 641 SUPERFAMILY SSF109998 44 214 6.08E-22 T 15-10-2018 IPR027304 Trigger factor/SurA domain superfamily Trad_0075 976b621df2f4faba3bc3464fae4d9373 641 SUPERFAMILY SSF109998 335 465 4.32E-9 T 15-10-2018 IPR027304 Trigger factor/SurA domain superfamily Trad_0075 976b621df2f4faba3bc3464fae4d9373 641 Gene3D G3DSA:1.10.4030.30 47 296 2.3E-27 T 15-10-2018 Trad_0075 976b621df2f4faba3bc3464fae4d9373 641 Pfam PF13145 PPIC-type PPIASE domain 424 528 5.1E-6 T 15-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 Trad_0075 976b621df2f4faba3bc3464fae4d9373 641 Pfam PF13145 PPIC-type PPIASE domain 165 294 2.9E-19 T 15-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 Trad_0075 976b621df2f4faba3bc3464fae4d9373 641 Gene3D G3DSA:3.10.50.40 185 283 2.3E-27 T 15-10-2018 Trad_1207 d4d9482d8328b242709394f1d3953c50 270 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 31 46 - T 15-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 Trad_1207 d4d9482d8328b242709394f1d3953c50 270 Pfam PF01209 ubiE/COQ5 methyltransferase family 15 246 1.0E-57 T 15-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 Trad_1207 d4d9482d8328b242709394f1d3953c50 270 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 20 246 3.3E-67 T 15-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 Trad_1207 d4d9482d8328b242709394f1d3953c50 270 SUPERFAMILY SSF53335 11 235 9.05E-44 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Trad_1207 d4d9482d8328b242709394f1d3953c50 270 Gene3D G3DSA:3.40.50.150 26 247 8.7E-59 T 15-10-2018 Trad_1207 d4d9482d8328b242709394f1d3953c50 270 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 11 246 34.035 T 15-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 Trad_2757 4bd67eafc4d6c3794ec5a87ff58a8ed2 277 Pfam PF03313 Serine dehydratase alpha chain 34 264 2.8E-60 T 15-10-2018 IPR005130 Serine dehydratase-like, alpha subunit Trad_2677 fa6f2b4ef65ca49e8db378b6f3567df2 514 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 132 151 2.5E-14 T 15-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Trad_2677 fa6f2b4ef65ca49e8db378b6f3567df2 514 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 234 258 2.5E-14 T 15-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Trad_2677 fa6f2b4ef65ca49e8db378b6f3567df2 514 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 162 186 2.5E-14 T 15-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Trad_2677 fa6f2b4ef65ca49e8db378b6f3567df2 514 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 374 400 2.5E-14 T 15-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Trad_2677 fa6f2b4ef65ca49e8db378b6f3567df2 514 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 322 341 2.5E-14 T 15-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Trad_2677 fa6f2b4ef65ca49e8db378b6f3567df2 514 Pfam PF00361 Proton-conducting membrane transporter 127 415 5.4E-55 T 15-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Trad_1449 c150631b71e9e7ba1e0c163679112da6 360 TIGRFAM TIGR01888 cas_cmr3: CRISPR type III-B/RAMP module-associated protein Cmr3 6 360 2.4E-31 T 15-10-2018 IPR010165 CRISPR-associated protein, TM1793 Trad_1449 c150631b71e9e7ba1e0c163679112da6 360 Gene3D G3DSA:3.30.70.2940 1 57 1.2E-6 T 15-10-2018 Trad_1449 c150631b71e9e7ba1e0c163679112da6 360 Gene3D G3DSA:3.30.70.2950 287 360 4.1E-11 T 15-10-2018 Trad_1449 c150631b71e9e7ba1e0c163679112da6 360 Pfam PF09700 CRISPR-associated protein (Cas_Cmr3) 5 360 1.6E-77 T 15-10-2018 IPR019117 CRISPR-associated protein, Cmr3 Trad_0506 2399c86a20139bb4a2d65ce479b5a039 607 Gene3D G3DSA:3.40.50.300 355 604 3.2E-61 T 15-10-2018 Trad_0506 2399c86a20139bb4a2d65ce479b5a039 607 SUPERFAMILY SSF90123 26 337 1.83E-44 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Trad_0506 2399c86a20139bb4a2d65ce479b5a039 607 Pfam PF00005 ABC transporter 385 531 1.9E-21 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Trad_0506 2399c86a20139bb4a2d65ce479b5a039 607 SUPERFAMILY SSF52540 367 599 2.13E-54 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_0506 2399c86a20139bb4a2d65ce479b5a039 607 Gene3D G3DSA:1.20.1560.10 3 338 1.6E-43 T 15-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Trad_0506 2399c86a20139bb4a2d65ce479b5a039 607 SMART SM00382 393 578 1.9E-14 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_0506 2399c86a20139bb4a2d65ce479b5a039 607 Pfam PF00664 ABC transporter transmembrane region 38 300 1.2E-21 T 15-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Trad_1736 1f15bef6f03602edf7bb8442b3e51c3f 304 Gene3D G3DSA:3.40.190.100 103 212 1.1E-86 T 15-10-2018 Trad_1736 1f15bef6f03602edf7bb8442b3e51c3f 304 SUPERFAMILY SSF53850 17 287 3.04E-74 T 15-10-2018 Trad_1736 1f15bef6f03602edf7bb8442b3e51c3f 304 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 21 270 8.6E-56 T 15-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 Trad_1736 1f15bef6f03602edf7bb8442b3e51c3f 304 Gene3D G3DSA:3.40.190.10 22 279 1.1E-86 T 15-10-2018 Trad_0155 6b046e255e3fb0749fa39375d5d08f8b 382 TIGRFAM TIGR00423 TIGR00423: radical SAM domain protein, CofH subfamily 46 357 2.4E-95 T 15-10-2018 IPR020050 FO synthase, subunit 2 GO:0016765 KEGG: 00680+2.5.1.77 Trad_0155 6b046e255e3fb0749fa39375d5d08f8b 382 PIRSF PIRSF004762 1 370 2.8E-90 T 15-10-2018 Trad_0155 6b046e255e3fb0749fa39375d5d08f8b 382 SUPERFAMILY SSF102114 11 351 2.75E-41 T 15-10-2018 Trad_0155 6b046e255e3fb0749fa39375d5d08f8b 382 Gene3D G3DSA:3.20.20.70 2 354 4.1E-42 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Trad_0155 6b046e255e3fb0749fa39375d5d08f8b 382 Pfam PF04055 Radical SAM superfamily 55 228 4.7E-10 T 15-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Trad_0155 6b046e255e3fb0749fa39375d5d08f8b 382 Hamap MF_00992 Cyclic dehypoxanthine futalosine synthase [mqnC]. 10 361 46.533 T 15-10-2018 IPR022431 Cyclic dehypoxanthine futalosine synthase GO:0009234 KEGG: 00130+1.21.98.1|MetaCyc: PWY-7371|MetaCyc: PWY-7374 Trad_0155 6b046e255e3fb0749fa39375d5d08f8b 382 TIGRFAM TIGR03699 menaquin_MqnC: dehypoxanthine futalosine cyclase 12 358 2.0E-130 T 15-10-2018 IPR022431 Cyclic dehypoxanthine futalosine synthase GO:0009234 KEGG: 00130+1.21.98.1|MetaCyc: PWY-7371|MetaCyc: PWY-7374 Trad_0520 8e233177aaacf43dafb0914db8e3aa58 278 Pfam PF01522 Polysaccharide deacetylase 58 192 2.5E-28 T 15-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 Trad_0520 8e233177aaacf43dafb0914db8e3aa58 278 SUPERFAMILY SSF88713 21 194 5.19E-36 T 15-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 Trad_0520 8e233177aaacf43dafb0914db8e3aa58 278 Gene3D G3DSA:3.20.20.370 1 231 5.5E-63 T 15-10-2018 Trad_0110 bc89c36f929c96a25a10161c9740e99c 313 Pfam PF01497 Periplasmic binding protein 41 273 3.6E-17 T 15-10-2018 IPR002491 ABC transporter periplasmic binding domain Trad_0110 bc89c36f929c96a25a10161c9740e99c 313 Gene3D G3DSA:3.40.50.1980 161 297 4.0E-19 T 15-10-2018 Trad_0110 bc89c36f929c96a25a10161c9740e99c 313 Gene3D G3DSA:3.40.50.1980 36 160 8.7E-28 T 15-10-2018 Trad_0110 bc89c36f929c96a25a10161c9740e99c 313 SUPERFAMILY SSF53807 38 296 3.1E-35 T 15-10-2018 Trad_0911 1b1634a87b3028bea6dc2ae5021865ae 183 Gene3D G3DSA:3.30.1060.10 2 170 5.7E-73 T 15-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 Trad_0911 1b1634a87b3028bea6dc2ae5021865ae 183 Pfam PF01625 Peptide methionine sulfoxide reductase 9 160 7.4E-66 T 15-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 Trad_0911 1b1634a87b3028bea6dc2ae5021865ae 183 SUPERFAMILY SSF55068 5 172 5.76E-76 T 15-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 Trad_0911 1b1634a87b3028bea6dc2ae5021865ae 183 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 7 165 38.234 T 15-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 Trad_0911 1b1634a87b3028bea6dc2ae5021865ae 183 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 9 157 6.7E-62 T 15-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 Trad_0275 2511f09edf966677dd8ab9a6a6161fd0 144 PRINTS PR01438 Universal stress protein signature 122 144 5.8E-10 T 15-10-2018 IPR006015 Universal stress protein A Trad_0275 2511f09edf966677dd8ab9a6a6161fd0 144 PRINTS PR01438 Universal stress protein signature 2 20 5.8E-10 T 15-10-2018 IPR006015 Universal stress protein A Trad_0275 2511f09edf966677dd8ab9a6a6161fd0 144 PRINTS PR01438 Universal stress protein signature 104 116 5.8E-10 T 15-10-2018 IPR006015 Universal stress protein A Trad_0275 2511f09edf966677dd8ab9a6a6161fd0 144 Pfam PF00582 Universal stress protein family 5 144 6.8E-26 T 15-10-2018 IPR006016 UspA Trad_0275 2511f09edf966677dd8ab9a6a6161fd0 144 SUPERFAMILY SSF52402 6 144 2.51E-28 T 15-10-2018 Trad_0275 2511f09edf966677dd8ab9a6a6161fd0 144 Gene3D G3DSA:3.40.50.620 1 144 4.2E-30 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Trad_0088 ed136fffbf71af278fd5dc041a7b65cc 336 SUPERFAMILY SSF52467 16 335 1.08E-81 T 15-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily Trad_0088 ed136fffbf71af278fd5dc041a7b65cc 336 Pfam PF01916 Deoxyhypusine synthase 28 331 1.3E-36 T 15-10-2018 IPR002773 Deoxyhypusine synthase GO:0008612 Reactome: R-HSA-204626 Trad_0088 ed136fffbf71af278fd5dc041a7b65cc 336 Gene3D G3DSA:3.40.910.10 1 335 1.3E-50 T 15-10-2018 IPR036982 Deoxyhypusine synthase superfamily GO:0008612 Reactome: R-HSA-204626 Trad_1140 86348fbe355b1f8f34427eb6eadbb105 321 Gene3D G3DSA:3.40.50.2300 121 321 1.3E-113 T 15-10-2018 Trad_1140 86348fbe355b1f8f34427eb6eadbb105 321 SUPERFAMILY SSF53822 20 321 2.1E-67 T 15-10-2018 IPR028082 Periplasmic binding protein-like I Trad_1140 86348fbe355b1f8f34427eb6eadbb105 321 Pfam PF13407 Periplasmic binding protein domain 23 277 2.9E-59 T 15-10-2018 IPR025997 Periplasmic binding protein Trad_1140 86348fbe355b1f8f34427eb6eadbb105 321 Gene3D G3DSA:3.40.50.2300 22 305 1.3E-113 T 15-10-2018 Trad_0857 89bfa7aba51fb7adf34d28f5a0f8b6d3 300 Gene3D G3DSA:3.40.50.1980 21 188 5.4E-38 T 15-10-2018 Trad_0857 89bfa7aba51fb7adf34d28f5a0f8b6d3 300 SUPERFAMILY SSF53807 25 299 7.85E-73 T 15-10-2018 Trad_0857 89bfa7aba51fb7adf34d28f5a0f8b6d3 300 PRINTS PR00690 Adhesin family signature 26 44 1.6E-8 T 15-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 Trad_0857 89bfa7aba51fb7adf34d28f5a0f8b6d3 300 PRINTS PR00690 Adhesin family signature 57 70 1.6E-8 T 15-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 Trad_0857 89bfa7aba51fb7adf34d28f5a0f8b6d3 300 PRINTS PR00690 Adhesin family signature 70 87 1.6E-8 T 15-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 Trad_0857 89bfa7aba51fb7adf34d28f5a0f8b6d3 300 PRINTS PR00690 Adhesin family signature 188 209 1.6E-8 T 15-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 Trad_0857 89bfa7aba51fb7adf34d28f5a0f8b6d3 300 PRINTS PR00690 Adhesin family signature 241 259 1.6E-8 T 15-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 Trad_0857 89bfa7aba51fb7adf34d28f5a0f8b6d3 300 Gene3D G3DSA:3.40.50.1980 189 300 2.4E-26 T 15-10-2018 Trad_0857 89bfa7aba51fb7adf34d28f5a0f8b6d3 300 Pfam PF01297 Zinc-uptake complex component A periplasmic 29 297 2.5E-58 T 15-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 Trad_0314 7385921c6709934ced306ec3c1dc4608 328 SUPERFAMILY SSF55347 158 241 2.62E-10 T 15-10-2018 Trad_0314 7385921c6709934ced306ec3c1dc4608 328 Gene3D G3DSA:3.30.360.10 137 318 3.5E-23 T 15-10-2018 Trad_0314 7385921c6709934ced306ec3c1dc4608 328 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 4 124 7.4E-28 T 15-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 Trad_0314 7385921c6709934ced306ec3c1dc4608 328 Gene3D G3DSA:3.40.50.720 1 136 3.1E-38 T 15-10-2018 Trad_0314 7385921c6709934ced306ec3c1dc4608 328 SUPERFAMILY SSF51735 3 159 8.22E-40 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_2942 1b673e84dadb1de299590662d87bc55f 130 Gene3D G3DSA:3.10.20.30 2 97 7.5E-16 T 15-10-2018 IPR012675 Beta-grasp domain superfamily Trad_2942 1b673e84dadb1de299590662d87bc55f 130 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 5 81 7.6E-10 T 15-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 Trad_2942 1b673e84dadb1de299590662d87bc55f 130 SUPERFAMILY SSF54292 8 90 2.36E-18 T 15-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Trad_1747 54ec8ba70277d4e4e047f40ac78fc18c 238 Pfam PF04039 Domain related to MnhB subunit of Na+/H+ antiporter 98 210 1.5E-12 T 15-10-2018 IPR007182 Na+/H+ antiporter MnhB subunit-related protein Trad_2630 8100e64da6c81e69235e7189a4448eea 301 PRINTS PR00412 Epoxide hydrolase signature 130 143 1.7E-9 T 15-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Trad_2630 8100e64da6c81e69235e7189a4448eea 301 PRINTS PR00412 Epoxide hydrolase signature 277 299 1.7E-9 T 15-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Trad_2630 8100e64da6c81e69235e7189a4448eea 301 PRINTS PR00412 Epoxide hydrolase signature 72 87 1.7E-9 T 15-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Trad_2630 8100e64da6c81e69235e7189a4448eea 301 PRINTS PR00412 Epoxide hydrolase signature 244 260 1.7E-9 T 15-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Trad_2630 8100e64da6c81e69235e7189a4448eea 301 PRINTS PR00111 Alpha/beta hydrolase fold signature 130 143 1.2E-12 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Trad_2630 8100e64da6c81e69235e7189a4448eea 301 PRINTS PR00111 Alpha/beta hydrolase fold signature 116 129 1.2E-12 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Trad_2630 8100e64da6c81e69235e7189a4448eea 301 PRINTS PR00111 Alpha/beta hydrolase fold signature 72 87 1.2E-12 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Trad_2630 8100e64da6c81e69235e7189a4448eea 301 Gene3D G3DSA:3.40.50.1820 17 301 1.6E-72 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold Trad_2630 8100e64da6c81e69235e7189a4448eea 301 SUPERFAMILY SSF53474 24 300 7.5E-69 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold Trad_2630 8100e64da6c81e69235e7189a4448eea 301 Pfam PF00561 alpha/beta hydrolase fold 46 284 1.2E-24 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Trad_1294 7b12309a915bee487b6f70159d980f4a 326 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 140 323 6.5E-31 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Trad_1294 7b12309a915bee487b6f70159d980f4a 326 Gene3D G3DSA:1.10.3720.10 113 319 3.3E-25 T 15-10-2018 IPR035906 MetI-like superfamily Trad_1294 7b12309a915bee487b6f70159d980f4a 326 SUPERFAMILY SSF161098 118 304 8.5E-32 T 15-10-2018 IPR035906 MetI-like superfamily Trad_1294 7b12309a915bee487b6f70159d980f4a 326 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 25 78 1.4E-12 T 15-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain Trad_0854 ec3d3990facd1c718299c15b107e3fbf 324 SUPERFAMILY SSF90002 217 305 2.75E-17 T 15-10-2018 Trad_0854 ec3d3990facd1c718299c15b107e3fbf 324 SMART SM00833 216 307 2.8E-13 T 15-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal Trad_0854 ec3d3990facd1c718299c15b107e3fbf 324 Gene3D G3DSA:3.40.50.300 3 200 7.4E-56 T 15-10-2018 Trad_0854 ec3d3990facd1c718299c15b107e3fbf 324 SUPERFAMILY SSF52540 4 191 7.02E-27 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_0854 ec3d3990facd1c718299c15b107e3fbf 324 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 217 305 2.5E-17 T 15-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal Trad_0854 ec3d3990facd1c718299c15b107e3fbf 324 Gene3D G3DSA:3.30.1220.10 201 307 1.0E-17 T 15-10-2018 IPR036627 CobW-like, C-terminal domain superfamily Trad_0854 ec3d3990facd1c718299c15b107e3fbf 324 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 7 182 3.8E-42 T 15-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain Trad_0822 72e740bc159e098712d08bbb381677b3 260 SUPERFAMILY SSF55120 2 252 2.73E-71 T 15-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Trad_0822 72e740bc159e098712d08bbb381677b3 260 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 2 243 3.8E-50 T 15-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 Trad_0822 72e740bc159e098712d08bbb381677b3 260 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 2 249 31.608 T 15-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 Trad_0822 72e740bc159e098712d08bbb381677b3 260 PIRSF PIRSF001430 1 259 1.2E-66 T 15-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 Trad_0822 72e740bc159e098712d08bbb381677b3 260 Gene3D G3DSA:3.30.70.580 1 109 7.8E-33 T 15-10-2018 Trad_0822 72e740bc159e098712d08bbb381677b3 260 Pfam PF01416 tRNA pseudouridine synthase 150 250 2.1E-24 T 15-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 Trad_0822 72e740bc159e098712d08bbb381677b3 260 Pfam PF01416 tRNA pseudouridine synthase 9 107 2.9E-10 T 15-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 Trad_0822 72e740bc159e098712d08bbb381677b3 260 Gene3D G3DSA:3.30.70.660 110 251 1.2E-38 T 15-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 Trad_0828 a5b7fa74c02f802b8c8e9173fd2e17c3 517 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 64 509 1.9E-86 T 15-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 Trad_0828 a5b7fa74c02f802b8c8e9173fd2e17c3 517 ProSitePatterns PS01271 Sodium:sulfate symporter family signature. 461 477 - T 15-10-2018 IPR031312 Sodium/sulphate symporter, conserved site Reactome: R-HSA-433137 Trad_0828 a5b7fa74c02f802b8c8e9173fd2e17c3 517 Pfam PF00939 Sodium:sulfate symporter transmembrane region 57 509 3.3E-80 T 15-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 Trad_0769 5c3aad86f40dd2f208d4baac1fea7cf1 316 Pfam PF00950 ABC 3 transport family 39 294 5.7E-83 T 15-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 Trad_0769 5c3aad86f40dd2f208d4baac1fea7cf1 316 SUPERFAMILY SSF81345 31 292 1.2E-42 T 15-10-2018 IPR037294 ABC transporter, BtuC-like Trad_1844 79490acd105615253e7bdb94934c7819 1095 Gene3D G3DSA:3.40.50.880 475 671 2.8E-5 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like Trad_1844 79490acd105615253e7bdb94934c7819 1095 SUPERFAMILY SSF49785 861 958 1.33E-5 T 15-10-2018 IPR008979 Galactose-binding-like domain superfamily Trad_1844 79490acd105615253e7bdb94934c7819 1095 Pfam PF17132 alpha-L-rhamnosidase 187 477 5.6E-11 T 15-10-2018 IPR033400 Alpha-L-rhamnosidase RhaM Trad_1844 79490acd105615253e7bdb94934c7819 1095 Gene3D G3DSA:2.60.120.260 862 973 2.1E-5 T 15-10-2018 IPR008979 Galactose-binding-like domain superfamily Trad_2867 8860d63b2a7f282c47c3b5a751435630 248 Gene3D G3DSA:3.40.50.720 4 247 1.7E-46 T 15-10-2018 Trad_2867 8860d63b2a7f282c47c3b5a751435630 248 Pfam PF04321 RmlD substrate binding domain 6 148 1.8E-34 T 15-10-2018 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581|Reactome: R-HSA-5689880 Trad_2867 8860d63b2a7f282c47c3b5a751435630 248 SUPERFAMILY SSF51735 6 237 1.66E-42 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_2023 a7d8799b5ac39ae064b6bd3eb1e08bb0 660 Pfam PF01496 V-type ATPase 116kDa subunit family 222 435 2.1E-8 T 15-10-2018 IPR002490 V-type ATPase, V0 complex, 116kDa subunit family GO:0015078|GO:0015991|GO:0033179 Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 Trad_2023 a7d8799b5ac39ae064b6bd3eb1e08bb0 660 Gene3D G3DSA:1.20.1460.20 41 271 9.2E-88 T 15-10-2018 Trad_2023 a7d8799b5ac39ae064b6bd3eb1e08bb0 660 Gene3D G3DSA:3.30.70.2750 130 203 9.2E-88 T 15-10-2018 Trad_2023 a7d8799b5ac39ae064b6bd3eb1e08bb0 660 Gene3D G3DSA:3.30.70.2170 1 294 9.2E-88 T 15-10-2018 Trad_1703 bdb7f79024b0cef9c949c34c1376d5ed 326 Gene3D G3DSA:2.170.120.30 53 148 1.4E-11 T 15-10-2018 Trad_1703 bdb7f79024b0cef9c949c34c1376d5ed 326 Pfam PF07949 YbbR-like protein 67 133 3.0E-6 T 15-10-2018 IPR012505 YbbR-like Trad_2828 b0f60ab299ef277432cba4841bd7a35a 504 Gene3D G3DSA:3.90.190.20 345 501 3.1E-48 T 15-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Trad_2828 b0f60ab299ef277432cba4841bd7a35a 504 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 1 497 29.742 T 15-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 Trad_2828 b0f60ab299ef277432cba4841bd7a35a 504 SUPERFAMILY SSF63418 17 114 6.02E-17 T 15-10-2018 IPR035911 MurE/MurF, N-terminal Trad_2828 b0f60ab299ef277432cba4841bd7a35a 504 Pfam PF01225 Mur ligase family, catalytic domain 49 110 2.5E-7 T 15-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 Trad_2828 b0f60ab299ef277432cba4841bd7a35a 504 Gene3D G3DSA:3.40.1190.10 115 344 3.6E-69 T 15-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Trad_2828 b0f60ab299ef277432cba4841bd7a35a 504 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 44 497 2.7E-135 T 15-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 Trad_2828 b0f60ab299ef277432cba4841bd7a35a 504 Pfam PF08245 Mur ligase middle domain 124 321 5.8E-46 T 15-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Trad_2828 b0f60ab299ef277432cba4841bd7a35a 504 Gene3D G3DSA:3.40.1390.10 2 114 6.5E-16 T 15-10-2018 Trad_2828 b0f60ab299ef277432cba4841bd7a35a 504 Pfam PF02875 Mur ligase family, glutamate ligase domain 341 425 1.2E-15 T 15-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Trad_2828 b0f60ab299ef277432cba4841bd7a35a 504 SUPERFAMILY SSF53623 87 353 7.2E-61 T 15-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Trad_2828 b0f60ab299ef277432cba4841bd7a35a 504 SUPERFAMILY SSF53244 341 499 1.01E-36 T 15-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Trad_1711 cc241f993e68a838cf2c7c50ff75b706 138 Pfam PF02310 B12 binding domain 6 122 4.7E-23 T 15-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 Trad_1711 cc241f993e68a838cf2c7c50ff75b706 138 SUPERFAMILY SSF52242 3 132 7.72E-52 T 15-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 Trad_1711 cc241f993e68a838cf2c7c50ff75b706 138 Gene3D G3DSA:3.40.50.280 1 138 2.4E-62 T 15-10-2018 Trad_1711 cc241f993e68a838cf2c7c50ff75b706 138 TIGRFAM TIGR00640 acid_CoA_mut_C: methylmalonyl-CoA mutase C-terminal domain 4 134 1.1E-52 T 15-10-2018 IPR006159 Methylmalonyl-CoA mutase, C-terminal GO:0016853 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 Trad_1285 3782ed44e9e3b5aaf196d5333751b128 283 Pfam PF02673 Bacitracin resistance protein BacA 6 259 3.4E-78 T 15-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 Trad_1285 3782ed44e9e3b5aaf196d5333751b128 283 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 1 265 17.513 T 15-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 Trad_1285 3782ed44e9e3b5aaf196d5333751b128 283 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 6 258 3.3E-77 T 15-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 Trad_1482 5f242a2c931ace7adff41a90c55c33db 333 SUPERFAMILY SSF51735 2 303 4.6E-45 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_1482 5f242a2c931ace7adff41a90c55c33db 333 Pfam PF01370 NAD dependent epimerase/dehydratase family 87 213 3.0E-12 T 15-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 Trad_1482 5f242a2c931ace7adff41a90c55c33db 333 Gene3D G3DSA:3.40.50.720 1 313 2.5E-45 T 15-10-2018 Trad_2203 3b43656268e5b5efef0ae480c5be5416 137 Pfam PF07332 Putative Actinobacterial Holin-X, holin superfamily III 18 133 4.7E-28 T 15-10-2018 IPR009937 Putative Actinobacterial Holin-X, holin superfamily III Trad_1531 a4442f512b283d4691f5f98542f9f1d3 291 SUPERFAMILY SSF161098 3 291 3.53E-63 T 15-10-2018 IPR035906 MetI-like superfamily Trad_1531 a4442f512b283d4691f5f98542f9f1d3 291 Gene3D G3DSA:1.10.3720.10 2 282 1.6E-58 T 15-10-2018 IPR035906 MetI-like superfamily Trad_1531 a4442f512b283d4691f5f98542f9f1d3 291 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 91 284 5.5E-21 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Trad_1652 cebb8740e8751c170f3b3db413e094e5 227 SUPERFAMILY SSF46785 155 223 6.07E-8 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Trad_1652 cebb8740e8751c170f3b3db413e094e5 227 SMART SM00100 16 135 6.7E-11 T 15-10-2018 IPR000595 Cyclic nucleotide-binding domain Trad_1652 cebb8740e8751c170f3b3db413e094e5 227 Pfam PF00027 Cyclic nucleotide-binding domain 34 121 1.9E-11 T 15-10-2018 IPR000595 Cyclic nucleotide-binding domain Trad_1652 cebb8740e8751c170f3b3db413e094e5 227 Pfam PF13545 Crp-like helix-turn-helix domain 156 221 8.6E-9 T 15-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Trad_1652 cebb8740e8751c170f3b3db413e094e5 227 Gene3D G3DSA:2.60.120.10 5 149 5.6E-32 T 15-10-2018 IPR014710 RmlC-like jelly roll fold Trad_1652 cebb8740e8751c170f3b3db413e094e5 227 SUPERFAMILY SSF51206 10 150 1.44E-28 T 15-10-2018 IPR018490 Cyclic nucleotide-binding-like Trad_1652 cebb8740e8751c170f3b3db413e094e5 227 Gene3D G3DSA:1.10.10.10 150 224 4.0E-12 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Trad_2936 0a581f798585eedb7d4ae20639b39089 299 Pfam PF00682 HMGL-like 12 263 1.6E-21 T 15-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 Trad_2936 0a581f798585eedb7d4ae20639b39089 299 SUPERFAMILY SSF51569 11 293 2.01E-41 T 15-10-2018 Trad_2936 0a581f798585eedb7d4ae20639b39089 299 Gene3D G3DSA:3.20.20.70 6 288 5.2E-78 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Trad_2951 d440948fdf2705fde8255d2d1341739a 539 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 318 488 4.8E-8 T 15-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 Trad_2951 d440948fdf2705fde8255d2d1341739a 539 Gene3D G3DSA:3.40.50.300 257 513 1.4E-49 T 15-10-2018 Trad_2951 d440948fdf2705fde8255d2d1341739a 539 SUPERFAMILY SSF52540 317 515 2.1E-26 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_1116 087c1176f17a67493fda08d4d8633fa5 445 SUPERFAMILY SSF51246 329 443 4.76E-44 T 15-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 Trad_1116 087c1176f17a67493fda08d4d8633fa5 445 SUPERFAMILY SSF56059 83 349 1.17E-71 T 15-10-2018 Trad_1116 087c1176f17a67493fda08d4d8633fa5 445 SMART SM00878 334 440 1.6E-66 T 15-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Trad_1116 087c1176f17a67493fda08d4d8633fa5 445 Pfam PF02785 Biotin carboxylase C-terminal domain 334 440 6.1E-41 T 15-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Trad_1116 087c1176f17a67493fda08d4d8633fa5 445 SUPERFAMILY SSF52440 1 112 9.35E-47 T 15-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Trad_1116 087c1176f17a67493fda08d4d8633fa5 445 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 152 166 - T 15-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Trad_1116 087c1176f17a67493fda08d4d8633fa5 445 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 442 5.4E-205 T 15-10-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 Trad_1116 087c1176f17a67493fda08d4d8633fa5 445 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 8.2E-44 T 15-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Trad_1116 087c1176f17a67493fda08d4d8633fa5 445 Gene3D G3DSA:3.30.470.130 1 444 4.3E-193 T 15-10-2018 Trad_1116 087c1176f17a67493fda08d4d8633fa5 445 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 320 1.2E-72 T 15-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Trad_0665 4fab159d389841daa46926c20ee41446 328 SUPERFAMILY SSF53850 140 296 2.76E-6 T 15-10-2018 Trad_0665 4fab159d389841daa46926c20ee41446 328 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 36 313 1.7E-81 T 15-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 Trad_0665 4fab159d389841daa46926c20ee41446 328 Gene3D G3DSA:3.40.190.170 26 328 3.6E-104 T 15-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily Trad_0665 4fab159d389841daa46926c20ee41446 328 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 36 278 2.6E-64 T 15-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 Trad_0665 4fab159d389841daa46926c20ee41446 328 PIRSF PIRSF006470 7 328 1.7E-89 T 15-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 Trad_1654 92b46bd9a740440fc07e1f72265a245e 370 Gene3D G3DSA:3.30.9.10 118 320 3.2E-45 T 15-10-2018 Trad_1654 92b46bd9a740440fc07e1f72265a245e 370 SUPERFAMILY SSF51971 29 363 4.59E-27 T 15-10-2018 Trad_1654 92b46bd9a740440fc07e1f72265a245e 370 Pfam PF01266 FAD dependent oxidoreductase 31 358 2.2E-33 T 15-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 Trad_1654 92b46bd9a740440fc07e1f72265a245e 370 Gene3D G3DSA:3.50.50.60 31 358 3.2E-45 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Trad_1019 3f3789d5152297ec3c62cf3c272d2291 774 Pfam PF12704 MacB-like periplasmic core domain 97 212 7.6E-10 T 15-10-2018 IPR025857 MacB-like periplasmic core domain Trad_0511 d349e64c57d2e552a80ad2f71164e1e0 289 SUPERFAMILY SSF56300 47 284 6.38E-31 T 15-10-2018 Trad_0511 d349e64c57d2e552a80ad2f71164e1e0 289 Pfam PF00149 Calcineurin-like phosphoesterase 46 219 4.2E-10 T 15-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 Trad_0511 d349e64c57d2e552a80ad2f71164e1e0 289 Gene3D G3DSA:3.60.21.10 46 235 1.9E-20 T 15-10-2018 IPR029052 Metallo-dependent phosphatase-like Trad_2180 f8f7064957ad25c402ca61e18a082d0d 264 Gene3D G3DSA:3.40.50.300 25 264 1.4E-70 T 15-10-2018 Trad_2180 f8f7064957ad25c402ca61e18a082d0d 264 SMART SM00382 51 245 4.0E-8 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_2180 f8f7064957ad25c402ca61e18a082d0d 264 Pfam PF00005 ABC transporter 43 187 3.5E-34 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Trad_2180 f8f7064957ad25c402ca61e18a082d0d 264 SUPERFAMILY SSF52540 27 258 5.32E-67 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_2180 f8f7064957ad25c402ca61e18a082d0d 264 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 27 264 9.5E-102 T 15-10-2018 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 Trad_2180 f8f7064957ad25c402ca61e18a082d0d 264 ProSitePatterns PS00211 ABC transporters family signature. 160 174 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Trad_2180 f8f7064957ad25c402ca61e18a082d0d 264 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 237 259 1.6E-5 T 15-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal Trad_2094 1c90766a297b05ae511e1b064362a971 216 Gene3D G3DSA:3.40.50.880 1 216 2.3E-37 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like Trad_2094 1c90766a297b05ae511e1b064362a971 216 Pfam PF06283 Trehalose utilisation 3 214 3.9E-45 T 15-10-2018 IPR029010 ThuA-like domain Trad_2094 1c90766a297b05ae511e1b064362a971 216 SUPERFAMILY SSF52317 3 216 1.07E-42 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like Trad_1780 6d13deca3e1c7dbab19112995e9754e1 178 Gene3D G3DSA:3.40.50.360 5 129 3.1E-17 T 15-10-2018 IPR029039 Flavoprotein-like superfamily Trad_1780 6d13deca3e1c7dbab19112995e9754e1 178 SUPERFAMILY SSF52218 5 166 2.55E-17 T 15-10-2018 IPR029039 Flavoprotein-like superfamily Trad_1780 6d13deca3e1c7dbab19112995e9754e1 178 Pfam PF12724 Flavodoxin domain 6 134 2.0E-26 T 15-10-2018 IPR026816 Flavodoxin domain Trad_0431 130124dc68e45b16b9149045f7acdd9f 401 TIGRFAM TIGR02710 TIGR02710: CRISPR-associated protein, TIGR02710 family 21 388 5.4E-90 T 15-10-2018 IPR014082 CRISPR-associated protein, Cas02710 Trad_0431 130124dc68e45b16b9149045f7acdd9f 401 Pfam PF09670 CRISPR-associated protein (Cas_Cas02710) 19 387 8.2E-81 T 15-10-2018 Trad_0431 130124dc68e45b16b9149045f7acdd9f 401 SUPERFAMILY SSF52980 9 129 9.65E-7 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 Trad_2026 108d87954161b23594ce408433633034 229 Pfam PF01323 DSBA-like thioredoxin domain 102 185 4.3E-8 T 15-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 Trad_2026 108d87954161b23594ce408433633034 229 SUPERFAMILY SSF52833 21 183 1.07E-22 T 15-10-2018 IPR036249 Thioredoxin-like superfamily Trad_2026 108d87954161b23594ce408433633034 229 Gene3D G3DSA:3.40.30.10 21 229 6.1E-36 T 15-10-2018 Trad_2144 d9b9f1d6474c61912983f823573fffbd 339 SUPERFAMILY SSF52540 29 288 2.58E-8 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_1660 6633b16f7c1c35318cc68e280590bea0 243 Pfam PF09704 CRISPR-associated protein (Cas_Cas5) 2 204 1.4E-32 T 15-10-2018 IPR021124 CRISPR-associated protein, Cas5 GO:0043571 Trad_1660 6633b16f7c1c35318cc68e280590bea0 243 TIGRFAM TIGR02593 CRISPR_cas5: CRISPR-associated protein Cas5 2 43 3.0E-15 T 15-10-2018 IPR013422 CRISPR-associated protein Cas5, N-terminal Trad_1660 6633b16f7c1c35318cc68e280590bea0 243 TIGRFAM TIGR01876 cas_Cas5d: CRISPR-associated protein Cas5, subtype I-C/DVULG 4 197 2.0E-43 T 15-10-2018 IPR010155 CRISPR pre-crRNA endoribonuclease Cas5d GO:0004519|GO:0051607 Trad_1660 6633b16f7c1c35318cc68e280590bea0 243 PIRSF PIRSF029950 1 242 3.8E-67 T 15-10-2018 IPR010155 CRISPR pre-crRNA endoribonuclease Cas5d GO:0004519|GO:0051607 Trad_1660 6633b16f7c1c35318cc68e280590bea0 243 Gene3D G3DSA:3.30.70.2660 1 241 2.1E-72 T 15-10-2018 Trad_0298 699ea28a3e07e2f840551a1ff6e1aa03 411 Gene3D G3DSA:3.40.190.10 142 389 2.0E-148 T 15-10-2018 Trad_0298 699ea28a3e07e2f840551a1ff6e1aa03 411 SUPERFAMILY SSF53850 15 408 2.34E-59 T 15-10-2018 Trad_0298 699ea28a3e07e2f840551a1ff6e1aa03 411 Gene3D G3DSA:3.40.190.10 25 366 2.0E-148 T 15-10-2018 Trad_0298 699ea28a3e07e2f840551a1ff6e1aa03 411 Pfam PF01547 Bacterial extracellular solute-binding protein 33 325 4.7E-32 T 15-10-2018 IPR006059 Bacterial extracellular solute-binding protein Trad_0158 54752f77ba18dd0a76c50f6fe841bb04 286 Gene3D G3DSA:1.10.3720.10 64 271 6.6E-15 T 15-10-2018 IPR035906 MetI-like superfamily Trad_0158 54752f77ba18dd0a76c50f6fe841bb04 286 SUPERFAMILY SSF161098 72 257 7.46E-17 T 15-10-2018 IPR035906 MetI-like superfamily Trad_0158 54752f77ba18dd0a76c50f6fe841bb04 286 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 279 1.1E-17 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Trad_2312 470aa8bb013fc6ae909028b928cf4301 896 TIGRFAM TIGR01596 cas3_HD: CRISPR-associated endonuclease Cas3-HD 25 215 4.7E-26 T 15-10-2018 IPR006483 CRISPR-associated Cas3-type HD domain Trad_2312 470aa8bb013fc6ae909028b928cf4301 896 Pfam PF00271 Helicase conserved C-terminal domain 533 640 2.3E-6 T 15-10-2018 IPR001650 Helicase, C-terminal Trad_2312 470aa8bb013fc6ae909028b928cf4301 896 Gene3D G3DSA:3.40.50.300 510 651 6.8E-12 T 15-10-2018 Trad_2312 470aa8bb013fc6ae909028b928cf4301 896 Gene3D G3DSA:1.10.3210.30 1 265 4.9E-65 T 15-10-2018 IPR038257 CRISPR-associated Cas3-type HD domain superfamily Trad_2312 470aa8bb013fc6ae909028b928cf4301 896 Gene3D G3DSA:3.40.50.300 266 479 3.4E-9 T 15-10-2018 Trad_2312 470aa8bb013fc6ae909028b928cf4301 896 SUPERFAMILY SSF109604 25 159 2.67E-7 T 15-10-2018 Trad_2312 470aa8bb013fc6ae909028b928cf4301 896 SUPERFAMILY SSF52540 290 642 1.08E-29 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_2312 470aa8bb013fc6ae909028b928cf4301 896 SMART SM00490 553 641 7.1E-4 T 15-10-2018 IPR001650 Helicase, C-terminal Trad_2312 470aa8bb013fc6ae909028b928cf4301 896 TIGRFAM TIGR01587 cas3_core: CRISPR-associated helicase Cas3 290 645 1.8E-66 T 15-10-2018 IPR006474 Helicase Cas3, CRISPR-associated, core Trad_1081 8791cc4ea25c6ff5336b4be13e14abcd 362 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 260 358 8.9E-21 T 15-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 Trad_1081 8791cc4ea25c6ff5336b4be13e14abcd 362 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 2 361 4.9E-99 T 15-10-2018 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 Trad_1081 8791cc4ea25c6ff5336b4be13e14abcd 362 Gene3D G3DSA:3.30.1360.120 1 361 2.3E-119 T 15-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 Trad_1081 8791cc4ea25c6ff5336b4be13e14abcd 362 Pfam PF01571 Aminomethyltransferase folate-binding domain 6 254 2.6E-87 T 15-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain Trad_1081 8791cc4ea25c6ff5336b4be13e14abcd 362 SUPERFAMILY SSF103025 1 266 1.88E-89 T 15-10-2018 Trad_1081 8791cc4ea25c6ff5336b4be13e14abcd 362 PIRSF PIRSF006487 1 362 1.3E-82 T 15-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 Trad_1081 8791cc4ea25c6ff5336b4be13e14abcd 362 SUPERFAMILY SSF101790 269 361 1.19E-21 T 15-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal Trad_1118 a8f9db72c611a263d103295d3d5dfa3d 165 Hamap MF_00073 Transcription antitermination protein NusB [nusB]. 1 147 21.1 T 15-10-2018 IPR011605 NusB antitermination factor GO:0006353 Trad_1118 a8f9db72c611a263d103295d3d5dfa3d 165 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 3 145 1.3E-35 T 15-10-2018 IPR011605 NusB antitermination factor GO:0006353 Trad_1118 a8f9db72c611a263d103295d3d5dfa3d 165 SUPERFAMILY SSF48013 3 142 3.53E-30 T 15-10-2018 IPR035926 NusB-like superfamily Trad_1118 a8f9db72c611a263d103295d3d5dfa3d 165 Gene3D G3DSA:1.10.940.10 1 152 5.0E-37 T 15-10-2018 IPR035926 NusB-like superfamily Trad_1118 a8f9db72c611a263d103295d3d5dfa3d 165 Pfam PF01029 NusB family 4 144 7.1E-32 T 15-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 Trad_2072 237dfa86ff34570d0437cd281ad10b78 396 Pfam PF14344 Domain of unknown function (DUF4397) 27 126 1.5E-11 T 15-10-2018 IPR025510 Domain of unknown function DUF4397 Trad_1155 0a43110279ba201cacfea7e10323a331 262 Pfam PF10615 Protein of unknown function (DUF2470) 175 251 3.7E-17 T 15-10-2018 IPR019595 Domain of unknown function DUF2470 Trad_1155 0a43110279ba201cacfea7e10323a331 262 Pfam PF13883 Pyridoxamine 5'-phosphate oxidase 16 162 3.9E-15 T 15-10-2018 Trad_1155 0a43110279ba201cacfea7e10323a331 262 Gene3D G3DSA:3.20.180.10 163 259 2.1E-31 T 15-10-2018 IPR037119 Haem oxygenase HugZ-like superfamily Trad_1155 0a43110279ba201cacfea7e10323a331 262 Gene3D G3DSA:2.30.110.10 5 162 3.2E-40 T 15-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Trad_1155 0a43110279ba201cacfea7e10323a331 262 SUPERFAMILY SSF50475 21 257 6.08E-53 T 15-10-2018 Trad_1084 9aa4727fe8aedf06423a2f2262f765ae 156 Pfam PF03477 ATP cone domain 50 132 5.1E-11 T 15-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 Trad_1084 9aa4727fe8aedf06423a2f2262f765ae 156 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 144 2.4E-46 T 15-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 Trad_1084 9aa4727fe8aedf06423a2f2262f765ae 156 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 150 67.512 T 15-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 Trad_2920 c0e3ba7d9f7645f1b546707f78e7dbb2 249 SUPERFAMILY SSF53335 10 248 6.27E-42 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Trad_2920 c0e3ba7d9f7645f1b546707f78e7dbb2 249 Pfam PF13649 Methyltransferase domain 53 143 2.3E-16 T 15-10-2018 Trad_2920 c0e3ba7d9f7645f1b546707f78e7dbb2 249 Gene3D G3DSA:2.20.25.110 151 208 1.4E-55 T 15-10-2018 Trad_2920 c0e3ba7d9f7645f1b546707f78e7dbb2 249 Gene3D G3DSA:3.40.50.150 13 247 1.4E-55 T 15-10-2018 Trad_1304 2c07f9326f85f31ee9f6e41aa16339b5 284 Pfam PF09995 Uncharacterized protein conserved in bacteria (DUF2236) 60 251 3.6E-13 T 15-10-2018 IPR018713 Domain of unknown function DUF2236 Trad_0498 56263f980eb58c2a388a5fa32c085018 334 Gene3D G3DSA:2.120.10.30 30 332 4.0E-19 T 15-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like Trad_0498 56263f980eb58c2a388a5fa32c085018 334 Pfam PF07995 Glucose / Sorbosone dehydrogenase 180 268 4.2E-8 T 15-10-2018 IPR012938 Glucose/Sorbosone dehydrogenase Trad_0498 56263f980eb58c2a388a5fa32c085018 334 SUPERFAMILY SSF50952 27 332 5.1E-31 T 15-10-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 Trad_0964 1c94c851db41d552ddbc163aed7d7e39 294 Gene3D G3DSA:3.30.720.100 7 73 3.1E-20 T 15-10-2018 Trad_0964 1c94c851db41d552ddbc163aed7d7e39 294 SUPERFAMILY SSF54593 3 133 1.58E-35 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Trad_0964 1c94c851db41d552ddbc163aed7d7e39 294 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 137 259 2.9E-31 T 15-10-2018 IPR028973 PhnB-like Trad_0964 1c94c851db41d552ddbc163aed7d7e39 294 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 2 129 4.5E-37 T 15-10-2018 IPR028973 PhnB-like Trad_0964 1c94c851db41d552ddbc163aed7d7e39 294 Gene3D G3DSA:3.30.720.110 74 133 4.8E-26 T 15-10-2018 Trad_0964 1c94c851db41d552ddbc163aed7d7e39 294 SUPERFAMILY SSF54593 140 294 2.01E-32 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Trad_0964 1c94c851db41d552ddbc163aed7d7e39 294 Gene3D G3DSA:3.10.180.70 134 294 3.7E-44 T 15-10-2018 Trad_0823 fd3ba9c8e73c9dc10702d8230e3a8d49 293 SMART SM00014 41 160 3.2E-15 T 15-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase Trad_0823 fd3ba9c8e73c9dc10702d8230e3a8d49 293 SUPERFAMILY SSF48317 3 169 1.7E-26 T 15-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily Trad_0823 fd3ba9c8e73c9dc10702d8230e3a8d49 293 Pfam PF01569 PAP2 superfamily 51 160 1.1E-20 T 15-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase Trad_0823 fd3ba9c8e73c9dc10702d8230e3a8d49 293 Gene3D G3DSA:1.20.144.10 80 175 9.1E-17 T 15-10-2018 Trad_0809 84da050cdcc99e13b788de854d1a8fd5 358 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 5 346 1.2E-136 T 15-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 Trad_0809 84da050cdcc99e13b788de854d1a8fd5 358 PIRSF PIRSF001361 1 352 2.5E-149 T 15-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 Trad_0809 84da050cdcc99e13b788de854d1a8fd5 358 Gene3D G3DSA:3.20.20.70 1 349 1.1E-145 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Trad_0809 84da050cdcc99e13b788de854d1a8fd5 358 SUPERFAMILY SSF51569 6 346 4.4E-124 T 15-10-2018 Trad_0809 84da050cdcc99e13b788de854d1a8fd5 358 Pfam PF00793 DAHP synthetase I family 45 339 1.0E-81 T 15-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 Trad_1188 c2d3a452d897a3b9706db8afa49fe8eb 171 Pfam PF12723 Protein of unknown function (DUF3809) 14 151 1.6E-47 T 15-10-2018 IPR024219 Protein of unknown function DUF3809 Trad_1188 c2d3a452d897a3b9706db8afa49fe8eb 171 Gene3D G3DSA:3.30.530.70 4 164 5.2E-52 T 15-10-2018 Trad_1099 4256c8f5b388060cd6869d836f189eb3 404 PIRSF PIRSF029171 2 401 3.9E-47 T 15-10-2018 IPR005152 Lipase, secreted GO:0004806|GO:0016042 Trad_1099 4256c8f5b388060cd6869d836f189eb3 404 Gene3D G3DSA:3.40.50.1820 27 259 4.7E-40 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold Trad_1099 4256c8f5b388060cd6869d836f189eb3 404 SUPERFAMILY SSF53474 79 389 6.26E-19 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold Trad_1099 4256c8f5b388060cd6869d836f189eb3 404 Gene3D G3DSA:3.40.50.1820 301 404 8.8E-10 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold Trad_1099 4256c8f5b388060cd6869d836f189eb3 404 Pfam PF03583 Secretory lipase 136 390 2.8E-14 T 15-10-2018 IPR005152 Lipase, secreted GO:0004806|GO:0016042 Trad_1872 4c8392f343249e7f0e8c4031c6c9031a 236 Gene3D G3DSA:3.40.50.720 2 236 5.9E-66 T 15-10-2018 Trad_1872 4c8392f343249e7f0e8c4031c6c9031a 236 SUPERFAMILY SSF51735 3 236 1.67E-66 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_1872 4c8392f343249e7f0e8c4031c6c9031a 236 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 1.4E-8 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_1872 4c8392f343249e7f0e8c4031c6c9031a 236 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 1.4E-8 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_1872 4c8392f343249e7f0e8c4031c6c9031a 236 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 1.4E-8 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_1872 4c8392f343249e7f0e8c4031c6c9031a 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 1.6E-34 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_1872 4c8392f343249e7f0e8c4031c6c9031a 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 1.6E-34 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_1872 4c8392f343249e7f0e8c4031c6c9031a 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 1.6E-34 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_1872 4c8392f343249e7f0e8c4031c6c9031a 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 1.6E-34 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_1872 4c8392f343249e7f0e8c4031c6c9031a 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 198 218 1.6E-34 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_1872 4c8392f343249e7f0e8c4031c6c9031a 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 1.6E-34 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_1872 4c8392f343249e7f0e8c4031c6c9031a 236 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 8 235 2.6E-47 T 15-10-2018 Trad_1234 2e7a41782d1d8edd10e21e76705bb817 295 Pfam PF00005 ABC transporter 31 185 2.4E-29 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Trad_1234 2e7a41782d1d8edd10e21e76705bb817 295 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Trad_1234 2e7a41782d1d8edd10e21e76705bb817 295 SMART SM00382 40 233 1.5E-10 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_1234 2e7a41782d1d8edd10e21e76705bb817 295 SUPERFAMILY SSF52540 14 243 6.97E-56 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_1234 2e7a41782d1d8edd10e21e76705bb817 295 Gene3D G3DSA:3.40.50.300 3 261 2.4E-51 T 15-10-2018 Trad_0792 7a39895578160b16e8adaba293023570 319 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 5 306 8.3E-88 T 15-10-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain Trad_0792 7a39895578160b16e8adaba293023570 319 Gene3D G3DSA:3.90.245.10 1 318 2.0E-110 T 15-10-2018 IPR036452 Ribonucleoside hydrolase-like Trad_0792 7a39895578160b16e8adaba293023570 319 SUPERFAMILY SSF53590 5 314 5.23E-90 T 15-10-2018 IPR036452 Ribonucleoside hydrolase-like Trad_0792 7a39895578160b16e8adaba293023570 319 ProSitePatterns PS01247 Inosine-uridine preferring nucleoside hydrolase family signature. 9 19 - T 15-10-2018 IPR015910 Inosine/uridine-preferring nucleoside hydrolase, conserved site GO:0016799 Trad_2202 1ca21cba8cc53e9278ed3785bfcce9d2 181 Gene3D G3DSA:1.20.120.20 11 153 2.2E-9 T 15-10-2018 Trad_2202 1ca21cba8cc53e9278ed3785bfcce9d2 181 SUPERFAMILY SSF58113 12 132 1.02E-6 T 15-10-2018 Trad_1904 00be4d2f3f71708a05cc5468e1ad861a 347 TIGRFAM TIGR00975 3a0107s03: phosphate ABC transporter, phosphate-binding protein PstS 20 322 9.7E-95 T 15-10-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 Trad_1904 00be4d2f3f71708a05cc5468e1ad861a 347 PIRSF PIRSF002756 3 339 7.4E-93 T 15-10-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 Trad_1904 00be4d2f3f71708a05cc5468e1ad861a 347 Gene3D G3DSA:3.40.190.10 96 275 3.4E-104 T 15-10-2018 Trad_1904 00be4d2f3f71708a05cc5468e1ad861a 347 SUPERFAMILY SSF53850 20 339 3.26E-79 T 15-10-2018 Trad_1904 00be4d2f3f71708a05cc5468e1ad861a 347 Pfam PF12849 PBP superfamily domain 18 309 2.2E-55 T 15-10-2018 IPR024370 PBP domain Trad_1904 00be4d2f3f71708a05cc5468e1ad861a 347 Gene3D G3DSA:3.40.190.10 20 322 3.4E-104 T 15-10-2018 Trad_2218 c2937a29749a06b3457190418b6ffcaf 324 Gene3D G3DSA:3.40.50.1010 123 260 2.4E-41 T 15-10-2018 Trad_2218 c2937a29749a06b3457190418b6ffcaf 324 SUPERFAMILY SSF88723 129 256 1.65E-18 T 15-10-2018 IPR029060 PIN-like domain superfamily Trad_2218 c2937a29749a06b3457190418b6ffcaf 324 Pfam PF01938 TRAM domain 263 307 6.5E-5 T 15-10-2018 IPR002792 TRAM domain Trad_1461 81abba2b84f971e59c3e106987e0a1a3 171 Pfam PF01966 HD domain 58 169 5.1E-9 T 15-10-2018 IPR006674 HD domain Trad_1461 81abba2b84f971e59c3e106987e0a1a3 171 TIGRFAM TIGR00277 HDIG: HDIG domain 72 154 8.0E-8 T 15-10-2018 IPR006675 HDIG domain Trad_1461 81abba2b84f971e59c3e106987e0a1a3 171 Gene3D G3DSA:1.10.3210.10 35 158 5.8E-9 T 15-10-2018 Trad_1461 81abba2b84f971e59c3e106987e0a1a3 171 SUPERFAMILY SSF109604 55 169 9.95E-10 T 15-10-2018 Trad_2124 fee0d52498e7e4c5192303257a44653f 267 SUPERFAMILY SSF55729 4 125 4.39E-13 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase Trad_2124 fee0d52498e7e4c5192303257a44653f 267 Pfam PF00583 Acetyltransferase (GNAT) family 22 121 1.1E-6 T 15-10-2018 IPR000182 GNAT domain Trad_2124 fee0d52498e7e4c5192303257a44653f 267 Gene3D G3DSA:3.40.630.30 3 146 5.4E-13 T 15-10-2018 Trad_1830 00c2217f618aa5d0dd9af82a6ca067be 421 Gene3D G3DSA:3.40.190.10 137 404 4.6E-120 T 15-10-2018 Trad_1830 00c2217f618aa5d0dd9af82a6ca067be 421 Gene3D G3DSA:3.40.190.10 20 376 4.6E-120 T 15-10-2018 Trad_1830 00c2217f618aa5d0dd9af82a6ca067be 421 Pfam PF13416 Bacterial extracellular solute-binding protein 36 355 7.4E-37 T 15-10-2018 IPR006059 Bacterial extracellular solute-binding protein Trad_1830 00c2217f618aa5d0dd9af82a6ca067be 421 SUPERFAMILY SSF53850 16 420 2.54E-53 T 15-10-2018 Trad_0414 94b1ec0faead080a0653d59f06bd6d87 677 Pfam PF01578 Cytochrome C assembly protein 96 301 1.5E-32 T 15-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 Trad_0414 94b1ec0faead080a0653d59f06bd6d87 677 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 87 113 3.6E-44 T 15-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 Trad_0414 94b1ec0faead080a0653d59f06bd6d87 677 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 137 154 3.6E-44 T 15-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 Trad_0414 94b1ec0faead080a0653d59f06bd6d87 677 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 165 187 3.6E-44 T 15-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 Trad_0414 94b1ec0faead080a0653d59f06bd6d87 677 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 300 316 3.6E-44 T 15-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 Trad_0414 94b1ec0faead080a0653d59f06bd6d87 677 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 250 270 3.6E-44 T 15-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 Trad_0414 94b1ec0faead080a0653d59f06bd6d87 677 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 216 242 3.6E-44 T 15-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 Trad_0414 94b1ec0faead080a0653d59f06bd6d87 677 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 280 300 3.6E-44 T 15-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 Trad_0414 94b1ec0faead080a0653d59f06bd6d87 677 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 400 419 9.5E-12 T 15-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 Trad_0414 94b1ec0faead080a0653d59f06bd6d87 677 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 357 374 9.5E-12 T 15-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 Trad_0414 94b1ec0faead080a0653d59f06bd6d87 677 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 318 333 9.5E-12 T 15-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 Trad_0414 94b1ec0faead080a0653d59f06bd6d87 677 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 195 210 9.5E-12 T 15-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 Trad_0414 94b1ec0faead080a0653d59f06bd6d87 677 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 11 35 9.5E-12 T 15-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 Trad_0414 94b1ec0faead080a0653d59f06bd6d87 677 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 320 649 3.2E-56 T 15-10-2018 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal Trad_0661 703d1ab6413cfb7119bdb6e2c40d254a 268 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 149 177 - T 15-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Trad_0661 703d1ab6413cfb7119bdb6e2c40d254a 268 Gene3D G3DSA:3.40.50.720 1 268 1.5E-75 T 15-10-2018 Trad_0661 703d1ab6413cfb7119bdb6e2c40d254a 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 2.9E-38 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_0661 703d1ab6413cfb7119bdb6e2c40d254a 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 2.9E-38 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_0661 703d1ab6413cfb7119bdb6e2c40d254a 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 2.9E-38 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_0661 703d1ab6413cfb7119bdb6e2c40d254a 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 226 246 2.9E-38 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_0661 703d1ab6413cfb7119bdb6e2c40d254a 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 136 152 2.9E-38 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_0661 703d1ab6413cfb7119bdb6e2c40d254a 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 186 203 2.9E-38 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_0661 703d1ab6413cfb7119bdb6e2c40d254a 268 SUPERFAMILY SSF51735 6 264 1.45E-72 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_0661 703d1ab6413cfb7119bdb6e2c40d254a 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 4.8E-12 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_0661 703d1ab6413cfb7119bdb6e2c40d254a 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 142 150 4.8E-12 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_0661 703d1ab6413cfb7119bdb6e2c40d254a 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 162 181 4.8E-12 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_0661 703d1ab6413cfb7119bdb6e2c40d254a 268 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 263 6.2E-48 T 15-10-2018 Trad_2692 2a3b7466ddc50a7bc95d0f08d38de044 295 Gene3D G3DSA:1.10.3720.10 79 293 8.9E-27 T 15-10-2018 IPR035906 MetI-like superfamily Trad_2692 2a3b7466ddc50a7bc95d0f08d38de044 295 SUPERFAMILY SSF161098 86 273 3.71E-31 T 15-10-2018 IPR035906 MetI-like superfamily Trad_2692 2a3b7466ddc50a7bc95d0f08d38de044 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 109 292 1.3E-37 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Trad_2692 2a3b7466ddc50a7bc95d0f08d38de044 295 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 16 68 5.4E-13 T 15-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain Trad_0350 18ae80d7ad553b49d20f80286478ac30 205 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 83 99 - T 15-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 Trad_0350 18ae80d7ad553b49d20f80286478ac30 205 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 28 203 3.7E-66 T 15-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 Trad_0350 18ae80d7ad553b49d20f80286478ac30 205 Gene3D G3DSA:3.30.1130.10 74 204 9.0E-57 T 15-10-2018 Trad_0350 18ae80d7ad553b49d20f80286478ac30 205 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 131 141 - T 15-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 Trad_0350 18ae80d7ad553b49d20f80286478ac30 205 Gene3D G3DSA:1.10.286.10 22 72 1.9E-16 T 15-10-2018 Trad_0350 18ae80d7ad553b49d20f80286478ac30 205 SUPERFAMILY SSF55620 21 203 2.59E-69 T 15-10-2018 Trad_0350 18ae80d7ad553b49d20f80286478ac30 205 Pfam PF01227 GTP cyclohydrolase I 27 202 1.9E-68 T 15-10-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 Trad_0350 18ae80d7ad553b49d20f80286478ac30 205 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 22 203 36.162 T 15-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 Trad_1177 a8caee259baa7371d053db0407280209 368 Gene3D G3DSA:1.20.1600.10 21 229 9.2E-21 T 15-10-2018 Trad_1177 a8caee259baa7371d053db0407280209 368 Gene3D G3DSA:1.20.1600.10 230 367 7.8E-14 T 15-10-2018 Trad_1177 a8caee259baa7371d053db0407280209 368 SUPERFAMILY SSF56954 39 337 8.46E-31 T 15-10-2018 Trad_1177 a8caee259baa7371d053db0407280209 368 Pfam PF02321 Outer membrane efflux protein 234 336 2.2E-15 T 15-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Trad_1177 a8caee259baa7371d053db0407280209 368 Pfam PF02321 Outer membrane efflux protein 66 172 6.9E-12 T 15-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Trad_0527 8d7afc28b69d0773a9dfedd17531877a 240 Gene3D G3DSA:1.20.120.1760 12 182 6.1E-6 T 15-10-2018 Trad_0527 8d7afc28b69d0773a9dfedd17531877a 240 PIRSF PIRSF000851 1 236 1.9E-59 T 15-10-2018 IPR026027 Phosphatidylcholine synthase Pcs KEGG: 00564+2.7.8.24|MetaCyc: PWY-6826 Trad_0824 32103e1edb2079fb7ed49d4ff6109d26 392 Pfam PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase 274 347 5.4E-20 T 15-10-2018 IPR018905 Alpha-galactosidase, NEW3 domain Trad_0824 32103e1edb2079fb7ed49d4ff6109d26 392 Pfam PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase 53 128 8.4E-11 T 15-10-2018 IPR018905 Alpha-galactosidase, NEW3 domain Trad_0824 32103e1edb2079fb7ed49d4ff6109d26 392 Pfam PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase 168 239 4.9E-6 T 15-10-2018 IPR018905 Alpha-galactosidase, NEW3 domain Trad_0582 33d4ff830b8527f2c1a0b70cadc33aee 263 SUPERFAMILY SSF53474 42 263 1.25E-47 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold Trad_0582 33d4ff830b8527f2c1a0b70cadc33aee 263 Gene3D G3DSA:3.40.50.1820 35 263 6.4E-57 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold Trad_0582 33d4ff830b8527f2c1a0b70cadc33aee 263 Pfam PF01738 Dienelactone hydrolase family 54 262 1.8E-45 T 15-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 Trad_0477 426e7a136c3cf31ced57f4986269ff0e 312 SUPERFAMILY SSF52540 22 243 3.17E-53 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_0477 426e7a136c3cf31ced57f4986269ff0e 312 SMART SM00382 49 228 4.3E-9 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_0477 426e7a136c3cf31ced57f4986269ff0e 312 Gene3D G3DSA:3.40.50.300 15 253 3.7E-57 T 15-10-2018 Trad_0477 426e7a136c3cf31ced57f4986269ff0e 312 Pfam PF00005 ABC transporter 40 181 3.3E-27 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Trad_2436 94aaaf0b6c7d7d5ea81b89c6c5dc4060 417 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 223 308 1.4E-11 T 15-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 Trad_2436 94aaaf0b6c7d7d5ea81b89c6c5dc4060 417 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 225 414 2.9E-23 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Trad_2436 94aaaf0b6c7d7d5ea81b89c6c5dc4060 417 Gene3D G3DSA:1.10.3720.10 203 415 1.8E-45 T 15-10-2018 IPR035906 MetI-like superfamily Trad_2436 94aaaf0b6c7d7d5ea81b89c6c5dc4060 417 SUPERFAMILY SSF161098 222 399 2.09E-35 T 15-10-2018 IPR035906 MetI-like superfamily Trad_1817 df8fceedd98b79aad4084538d91368c7 313 SUPERFAMILY SSF52540 26 187 1.77E-24 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_1817 df8fceedd98b79aad4084538d91368c7 313 Gene3D G3DSA:3.40.50.300 14 186 1.4E-35 T 15-10-2018 Trad_1817 df8fceedd98b79aad4084538d91368c7 313 Pfam PF13177 DNA polymerase III, delta subunit 26 185 8.9E-29 T 15-10-2018 Trad_0427 f6e6bc2a32991306238e3da16c8a3b3f 80 SUPERFAMILY SSF143100 7 66 1.1E-15 T 15-10-2018 IPR035069 TTHA1013/TTHA0281-like Trad_0427 f6e6bc2a32991306238e3da16c8a3b3f 80 Pfam PF08972 Domain of unknown function (DUF1902) 7 64 2.3E-24 T 15-10-2018 IPR015066 Domain of unknown function DUF1902 Trad_0427 f6e6bc2a32991306238e3da16c8a3b3f 80 Gene3D G3DSA:3.30.2390.10 4 76 3.0E-29 T 15-10-2018 Trad_2654 1d4fc4b438b9a54b6b544160d01c7cff 320 SUPERFAMILY SSF51735 2 311 8.73E-92 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_2654 1d4fc4b438b9a54b6b544160d01c7cff 320 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 305 5.5E-61 T 15-10-2018 IPR016040 NAD(P)-binding domain Trad_2654 1d4fc4b438b9a54b6b544160d01c7cff 320 Gene3D G3DSA:3.90.25.10 180 309 1.1E-92 T 15-10-2018 Trad_2654 1d4fc4b438b9a54b6b544160d01c7cff 320 PRINTS PR01713 Nucleotide sugar epimerase signature 276 293 2.8E-22 T 15-10-2018 Trad_2654 1d4fc4b438b9a54b6b544160d01c7cff 320 PRINTS PR01713 Nucleotide sugar epimerase signature 29 45 2.8E-22 T 15-10-2018 Trad_2654 1d4fc4b438b9a54b6b544160d01c7cff 320 PRINTS PR01713 Nucleotide sugar epimerase signature 215 230 2.8E-22 T 15-10-2018 Trad_2654 1d4fc4b438b9a54b6b544160d01c7cff 320 PRINTS PR01713 Nucleotide sugar epimerase signature 237 252 2.8E-22 T 15-10-2018 Trad_2654 1d4fc4b438b9a54b6b544160d01c7cff 320 Gene3D G3DSA:3.40.50.720 5 297 1.1E-92 T 15-10-2018 Trad_0914 694769ed0ae2aa3d067032a02d44f534 398 Hamap MF_00372 Imidazolonepropionase [hutI]. 3 397 38.413 T 15-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Trad_0914 694769ed0ae2aa3d067032a02d44f534 398 Gene3D G3DSA:2.30.40.10 8 394 3.8E-135 T 15-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Trad_0914 694769ed0ae2aa3d067032a02d44f534 398 SUPERFAMILY SSF51556 68 358 5.84E-69 T 15-10-2018 IPR032466 Metal-dependent hydrolase Trad_0914 694769ed0ae2aa3d067032a02d44f534 398 TIGRFAM TIGR01224 hutI: imidazolonepropionase 34 394 1.2E-135 T 15-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Trad_0914 694769ed0ae2aa3d067032a02d44f534 398 Gene3D G3DSA:3.20.20.140 69 359 3.8E-135 T 15-10-2018 Trad_0914 694769ed0ae2aa3d067032a02d44f534 398 Pfam PF01979 Amidohydrolase family 66 374 3.0E-14 T 15-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Trad_0914 694769ed0ae2aa3d067032a02d44f534 398 SUPERFAMILY SSF51338 33 392 2.07E-14 T 15-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Trad_0210 693060edbfd41ee0afc0c9f337a9cc09 340 Pfam PF02780 Transketolase, C-terminal domain 208 330 4.1E-35 T 15-10-2018 IPR033248 Transketolase, C-terminal domain Trad_0210 693060edbfd41ee0afc0c9f337a9cc09 340 Gene3D G3DSA:3.40.50.970 15 206 2.9E-79 T 15-10-2018 Trad_0210 693060edbfd41ee0afc0c9f337a9cc09 340 SUPERFAMILY SSF52922 203 339 6.41E-39 T 15-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Trad_0210 693060edbfd41ee0afc0c9f337a9cc09 340 Gene3D G3DSA:3.40.50.920 207 339 1.9E-46 T 15-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Trad_0210 693060edbfd41ee0afc0c9f337a9cc09 340 Pfam PF02779 Transketolase, pyrimidine binding domain 18 192 1.2E-41 T 15-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Trad_0210 693060edbfd41ee0afc0c9f337a9cc09 340 SUPERFAMILY SSF52518 17 206 9.42E-66 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold Trad_0210 693060edbfd41ee0afc0c9f337a9cc09 340 SMART SM00861 18 193 1.2E-63 T 15-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Trad_1158 b5babb778fa27ca41d485c015fe73957 308 Gene3D G3DSA:3.40.50.1980 39 162 4.3E-38 T 15-10-2018 Trad_1158 b5babb778fa27ca41d485c015fe73957 308 SUPERFAMILY SSF53807 43 300 1.53E-46 T 15-10-2018 Trad_1158 b5babb778fa27ca41d485c015fe73957 308 Gene3D G3DSA:3.40.50.1980 163 300 3.8E-46 T 15-10-2018 Trad_1158 b5babb778fa27ca41d485c015fe73957 308 Pfam PF01497 Periplasmic binding protein 44 276 4.6E-31 T 15-10-2018 IPR002491 ABC transporter periplasmic binding domain Trad_1595 b20b015b656ce6542561cfdc0f069f5a 173 Gene3D G3DSA:3.40.50.1010 2 167 1.1E-36 T 15-10-2018 Trad_1595 b20b015b656ce6542561cfdc0f069f5a 173 Pfam PF01936 NYN domain 4 163 6.0E-32 T 15-10-2018 IPR021139 NYN domain, limkain-b1-type Trad_0066 1b82e1908c683eb07a3543d4fdb703dd 179 Pfam PF01478 Type IV leader peptidase family 106 169 8.6E-9 T 15-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 Trad_0066 1b82e1908c683eb07a3543d4fdb703dd 179 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 9 91 9.5E-31 T 15-10-2018 IPR010627 Peptidase A24A, N-terminal Trad_1198 f35219dac43d03335f37a3c8706866e2 1160 Pfam PF00271 Helicase conserved C-terminal domain 496 601 1.3E-19 T 15-10-2018 IPR001650 Helicase, C-terminal Trad_1198 f35219dac43d03335f37a3c8706866e2 1160 Pfam PF00176 SNF2 family N-terminal domain 125 298 2.1E-14 T 15-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 Trad_1198 f35219dac43d03335f37a3c8706866e2 1160 SMART SM00490 520 601 2.7E-23 T 15-10-2018 IPR001650 Helicase, C-terminal Trad_1198 f35219dac43d03335f37a3c8706866e2 1160 SUPERFAMILY SSF52540 88 289 1.42E-34 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_1198 f35219dac43d03335f37a3c8706866e2 1160 Gene3D G3DSA:3.40.50.300 436 631 1.1E-40 T 15-10-2018 Trad_1198 f35219dac43d03335f37a3c8706866e2 1160 SUPERFAMILY SSF52540 220 641 1.3E-44 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_1198 f35219dac43d03335f37a3c8706866e2 1160 Pfam PF13020 Domain of unknown function (DUF3883) 1041 1129 3.6E-19 T 15-10-2018 IPR024975 Domain of unknown function DUF3883 Trad_1198 f35219dac43d03335f37a3c8706866e2 1160 Gene3D G3DSA:3.40.50.10810 101 356 1.2E-57 T 15-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily Trad_1198 f35219dac43d03335f37a3c8706866e2 1160 SMART SM00487 100 300 2.3E-23 T 15-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Trad_2776 8d0256bc086ac76cbe24b27a3e22b3e0 272 Pfam PF02104 SURF1 family 22 236 1.0E-35 T 15-10-2018 IPR002994 Surfeit locus 1/Shy1 GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Trad_2347 b35bab39925300570c1be5c6133452fa 597 Pfam PF12831 FAD dependent oxidoreductase 49 441 6.3E-69 T 15-10-2018 IPR039649 Digeranylgeranylglycerophospholipid reductase, N-terminal Trad_2347 b35bab39925300570c1be5c6133452fa 597 Gene3D G3DSA:3.50.50.60 46 213 1.6E-11 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Trad_2347 b35bab39925300570c1be5c6133452fa 597 SUPERFAMILY SSF51905 48 456 6.87E-16 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Trad_1859 fccf013007e151f46dd11e59d777aea6 243 Gene3D G3DSA:2.50.20.10 26 242 2.0E-47 T 15-10-2018 Trad_1859 fccf013007e151f46dd11e59d777aea6 243 SUPERFAMILY SSF89392 37 241 1.41E-5 T 15-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX Trad_2422 5b81d24d30fcd96d3af689f2a3051517 142 Gene3D G3DSA:3.10.50.40 3 142 4.1E-48 T 15-10-2018 Trad_2422 5b81d24d30fcd96d3af689f2a3051517 142 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 3 139 1.2E-21 T 15-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain Trad_2422 5b81d24d30fcd96d3af689f2a3051517 142 SUPERFAMILY SSF54534 4 141 1.71E-39 T 15-10-2018 Trad_0154 d059a101daff37384753a648515411a5 188 Gene3D G3DSA:3.90.1570.10 5 188 6.0E-21 T 15-10-2018 Trad_0154 d059a101daff37384753a648515411a5 188 Pfam PF05685 Putative restriction endonuclease 14 178 1.1E-31 T 15-10-2018 IPR008538 Domain of unknown function DUF820 Trad_0154 d059a101daff37384753a648515411a5 188 SUPERFAMILY SSF52980 8 183 5.9E-27 T 15-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 Trad_1503 c42d65f0d60ce8242017aaf3dd650c43 307 Pfam PF01014 Uricase 163 301 2.3E-21 T 15-10-2018 IPR002042 Uricase KEGG: 00230+1.7.3.3|KEGG: 00232+1.7.3.3|MetaCyc: PWY-5691 Trad_1503 c42d65f0d60ce8242017aaf3dd650c43 307 Pfam PF01014 Uricase 12 127 5.9E-6 T 15-10-2018 IPR002042 Uricase KEGG: 00230+1.7.3.3|KEGG: 00232+1.7.3.3|MetaCyc: PWY-5691 Trad_1503 c42d65f0d60ce8242017aaf3dd650c43 307 PRINTS PR00093 Uricase signature 185 197 7.5E-13 T 15-10-2018 IPR002042 Uricase KEGG: 00230+1.7.3.3|KEGG: 00232+1.7.3.3|MetaCyc: PWY-5691 Trad_1503 c42d65f0d60ce8242017aaf3dd650c43 307 PRINTS PR00093 Uricase signature 169 185 7.5E-13 T 15-10-2018 IPR002042 Uricase KEGG: 00230+1.7.3.3|KEGG: 00232+1.7.3.3|MetaCyc: PWY-5691 Trad_1503 c42d65f0d60ce8242017aaf3dd650c43 307 PRINTS PR00093 Uricase signature 66 80 7.5E-13 T 15-10-2018 IPR002042 Uricase KEGG: 00230+1.7.3.3|KEGG: 00232+1.7.3.3|MetaCyc: PWY-5691 Trad_1503 c42d65f0d60ce8242017aaf3dd650c43 307 Gene3D G3DSA:3.10.270.10 7 307 2.0E-82 T 15-10-2018 Trad_1503 c42d65f0d60ce8242017aaf3dd650c43 307 PIRSF PIRSF000241 2 307 1.5E-63 T 15-10-2018 IPR002042 Uricase KEGG: 00230+1.7.3.3|KEGG: 00232+1.7.3.3|MetaCyc: PWY-5691 Trad_1503 c42d65f0d60ce8242017aaf3dd650c43 307 SUPERFAMILY SSF55620 11 128 2.17E-21 T 15-10-2018 Trad_1503 c42d65f0d60ce8242017aaf3dd650c43 307 SUPERFAMILY SSF55620 161 306 2.36E-36 T 15-10-2018 Trad_1503 c42d65f0d60ce8242017aaf3dd650c43 307 TIGRFAM TIGR03383 urate_oxi: urate oxidase 7 305 1.2E-62 T 15-10-2018 IPR002042 Uricase KEGG: 00230+1.7.3.3|KEGG: 00232+1.7.3.3|MetaCyc: PWY-5691 Trad_1503 c42d65f0d60ce8242017aaf3dd650c43 307 ProDom PD003367 URICASE OXIDOREDUCTASE URATE OXIDASE METABOLISM PURINE PEROXISOME ACETYLATION II DIRECT 202 284 0.003 T 15-10-2018 Trad_0657 8d09f822b04967633e7b23cc28b1d423 475 Gene3D G3DSA:1.10.2020.10 56 156 6.7E-139 T 15-10-2018 Trad_0657 8d09f822b04967633e7b23cc28b1d423 475 Hamap MF_00675 Uronate isomerase [uxaC]. 7 474 38.87 T 15-10-2018 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 Trad_0657 8d09f822b04967633e7b23cc28b1d423 475 Gene3D G3DSA:3.20.20.140 23 461 6.7E-139 T 15-10-2018 Trad_0657 8d09f822b04967633e7b23cc28b1d423 475 Pfam PF02614 Glucuronate isomerase 23 469 6.0E-81 T 15-10-2018 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 Trad_0657 8d09f822b04967633e7b23cc28b1d423 475 SUPERFAMILY SSF51556 11 472 1.94E-141 T 15-10-2018 IPR032466 Metal-dependent hydrolase Trad_1811 c19a17e91c80619a5031c63afc85a783 292 Pfam PF00589 Phage integrase family 112 270 2.6E-37 T 15-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Trad_1811 c19a17e91c80619a5031c63afc85a783 292 SUPERFAMILY SSF56349 4 275 7.36E-50 T 15-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Trad_1811 c19a17e91c80619a5031c63afc85a783 292 Gene3D G3DSA:1.10.443.10 106 290 1.4E-47 T 15-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Trad_1811 c19a17e91c80619a5031c63afc85a783 292 Gene3D G3DSA:1.10.150.130 1 105 4.4E-17 T 15-10-2018 IPR010998 Integrase/recombinase, N-terminal Trad_1947 84b99c3f50c5d17d540c58375551a7e1 403 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 293 1.3E-24 T 15-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 Trad_1947 84b99c3f50c5d17d540c58375551a7e1 403 SUPERFAMILY SSF51735 1 366 4.25E-55 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_1947 84b99c3f50c5d17d540c58375551a7e1 403 Gene3D G3DSA:3.90.25.10 217 373 2.4E-155 T 15-10-2018 Trad_1947 84b99c3f50c5d17d540c58375551a7e1 403 Gene3D G3DSA:3.40.50.720 2 302 2.4E-155 T 15-10-2018 Trad_1481 3a5ba3e3c710b1b4cc5af931610566f8 290 Gene3D G3DSA:3.40.50.1820 1 282 5.2E-63 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold Trad_1481 3a5ba3e3c710b1b4cc5af931610566f8 290 Pfam PF00561 alpha/beta hydrolase fold 23 260 4.9E-20 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Trad_1481 3a5ba3e3c710b1b4cc5af931610566f8 290 SUPERFAMILY SSF53474 3 273 1.65E-55 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold Trad_1481 3a5ba3e3c710b1b4cc5af931610566f8 290 PRINTS PR00111 Alpha/beta hydrolase fold signature 91 104 1.9E-17 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Trad_1481 3a5ba3e3c710b1b4cc5af931610566f8 290 PRINTS PR00111 Alpha/beta hydrolase fold signature 218 232 1.9E-17 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Trad_1481 3a5ba3e3c710b1b4cc5af931610566f8 290 PRINTS PR00111 Alpha/beta hydrolase fold signature 105 118 1.9E-17 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Trad_1481 3a5ba3e3c710b1b4cc5af931610566f8 290 PRINTS PR00111 Alpha/beta hydrolase fold signature 47 62 1.9E-17 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Trad_1838 250e3b93c971e67d8c441f5d02e0123e 651 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 113 526 1.5E-64 T 15-10-2018 IPR000914 Solute-binding protein family 5 domain Trad_1838 250e3b93c971e67d8c441f5d02e0123e 651 SUPERFAMILY SSF53850 95 635 1.14E-84 T 15-10-2018 Trad_1838 250e3b93c971e67d8c441f5d02e0123e 651 Gene3D G3DSA:3.10.105.10 364 611 3.1E-41 T 15-10-2018 Trad_0395 4a2cb1f2823e69a4d841462f116823f3 310 Pfam PF01063 Amino-transferase class IV 52 279 1.6E-37 T 15-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 Trad_0395 4a2cb1f2823e69a4d841462f116823f3 310 Gene3D G3DSA:3.30.470.10 7 142 1.2E-34 T 15-10-2018 Trad_0395 4a2cb1f2823e69a4d841462f116823f3 310 SUPERFAMILY SSF56752 25 304 3.79E-70 T 15-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 Trad_0395 4a2cb1f2823e69a4d841462f116823f3 310 Gene3D G3DSA:3.20.10.10 144 309 1.3E-47 T 15-10-2018 Trad_0043 7edaa0928586359fd225d1c6783335b7 262 SUPERFAMILY SSF55008 5 65 5.63E-9 T 15-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 Trad_0043 7edaa0928586359fd225d1c6783335b7 262 Gene3D G3DSA:1.20.1510.10 82 261 4.6E-10 T 15-10-2018 IPR027469 Cation efflux transmembrane domain superfamily Trad_0043 7edaa0928586359fd225d1c6783335b7 262 Pfam PF00403 Heavy-metal-associated domain 6 47 4.7E-5 T 15-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 Trad_0043 7edaa0928586359fd225d1c6783335b7 262 SUPERFAMILY SSF161111 81 259 1.57E-28 T 15-10-2018 IPR027469 Cation efflux transmembrane domain superfamily Trad_0043 7edaa0928586359fd225d1c6783335b7 262 Pfam PF01545 Cation efflux family 149 259 1.7E-7 T 15-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 Trad_0043 7edaa0928586359fd225d1c6783335b7 262 Pfam PF01545 Cation efflux family 86 146 1.9E-8 T 15-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 Trad_0575 dc5af7709f220a7416abfd8714e85d2e 261 Gene3D G3DSA:2.130.10.10 34 232 4.2E-8 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Trad_0575 dc5af7709f220a7416abfd8714e85d2e 261 SUPERFAMILY SSF50969 36 250 1.57E-16 T 15-10-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like Trad_0575 dc5af7709f220a7416abfd8714e85d2e 261 Pfam PF05096 Glutamine cyclotransferase 25 258 4.6E-97 T 15-10-2018 IPR007788 Glutaminyl-peptide cyclotransferase GO:0016603|GO:0017186 MetaCyc: PWY-7942 Trad_1153 c3fd69919864109a5ccafda5256fdc72 315 Gene3D G3DSA:3.40.50.1980 137 307 1.0E-50 T 15-10-2018 Trad_1153 c3fd69919864109a5ccafda5256fdc72 315 Pfam PF01497 Periplasmic binding protein 49 277 5.9E-25 T 15-10-2018 IPR002491 ABC transporter periplasmic binding domain Trad_1153 c3fd69919864109a5ccafda5256fdc72 315 SUPERFAMILY SSF53807 31 298 3.22E-60 T 15-10-2018 Trad_1153 c3fd69919864109a5ccafda5256fdc72 315 Gene3D G3DSA:3.40.50.1980 29 135 8.6E-28 T 15-10-2018 Trad_0626 54b1e6a42296eb26257730546bfa87e2 250 SUPERFAMILY SSF161098 51 236 3.4E-25 T 15-10-2018 IPR035906 MetI-like superfamily Trad_0626 54b1e6a42296eb26257730546bfa87e2 250 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 76 238 7.0E-19 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Trad_0626 54b1e6a42296eb26257730546bfa87e2 250 Gene3D G3DSA:1.10.3720.10 48 244 1.5E-17 T 15-10-2018 IPR035906 MetI-like superfamily Trad_2747 9a539e961e484d70fd77fad42145fcdd 53 Pfam PF01679 Proteolipid membrane potential modulator 3 50 1.4E-19 T 15-10-2018 IPR000612 Proteolipid membrane potential modulator GO:0016021 Trad_2747 9a539e961e484d70fd77fad42145fcdd 53 ProSitePatterns PS01309 Uncharacterized protein family UPF0057 signature. 8 23 - T 15-10-2018 IPR000612 Proteolipid membrane potential modulator GO:0016021 Trad_0363 6ea1ddb9f7f1d0f21fa9ea8fc6e3febe 276 Pfam PF02673 Bacitracin resistance protein BacA 6 268 7.5E-71 T 15-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 Trad_0363 6ea1ddb9f7f1d0f21fa9ea8fc6e3febe 276 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 1 274 16.285 T 15-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 Trad_2416 d99a2050068d121f027366147a76227c 497 PIRSF PIRSF002741 17 490 1.3E-100 T 15-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Trad_2416 d99a2050068d121f027366147a76227c 497 Gene3D G3DSA:3.40.190.10 176 481 3.3E-118 T 15-10-2018 Trad_2416 d99a2050068d121f027366147a76227c 497 Gene3D G3DSA:3.10.105.10 251 471 3.3E-118 T 15-10-2018 Trad_2416 d99a2050068d121f027366147a76227c 497 SUPERFAMILY SSF53850 19 496 2.17E-128 T 15-10-2018 Trad_2416 d99a2050068d121f027366147a76227c 497 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 61 417 1.5E-82 T 15-10-2018 IPR000914 Solute-binding protein family 5 domain Trad_2416 d99a2050068d121f027366147a76227c 497 Gene3D G3DSA:3.90.76.10 28 175 3.3E-118 T 15-10-2018 Trad_0835 2548d0dfdbec85885eedfbd25fc8faff 340 SUPERFAMILY SSF51569 68 323 8.58E-76 T 15-10-2018 Trad_0835 2548d0dfdbec85885eedfbd25fc8faff 340 PIRSF PIRSF001357 69 330 1.5E-74 T 15-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 Trad_0835 2548d0dfdbec85885eedfbd25fc8faff 340 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 77 302 6.7E-47 T 15-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 Trad_0835 2548d0dfdbec85885eedfbd25fc8faff 340 SMART SM01133 75 321 3.3E-76 T 15-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 Trad_0835 2548d0dfdbec85885eedfbd25fc8faff 340 Pfam PF01791 DeoC/LacD family aldolase 80 287 7.7E-24 T 15-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 Trad_0835 2548d0dfdbec85885eedfbd25fc8faff 340 Gene3D G3DSA:3.20.20.70 66 325 5.9E-90 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Trad_1575 3eca562bf96d5c6bc58599c85733bd03 270 SUPERFAMILY SSF52096 17 263 2.93E-75 T 15-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Trad_1575 3eca562bf96d5c6bc58599c85733bd03 270 Gene3D G3DSA:1.10.12.10 207 261 3.5E-15 T 15-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal Trad_1575 3eca562bf96d5c6bc58599c85733bd03 270 Pfam PF00378 Enoyl-CoA hydratase/isomerase 15 262 8.7E-58 T 15-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 Trad_1575 3eca562bf96d5c6bc58599c85733bd03 270 Gene3D G3DSA:3.90.226.10 13 206 2.1E-61 T 15-10-2018 Trad_0184 a4976f3e8ed7f313cfae2dfd1bda7507 168 PIRSF PIRSF000239 2 167 1.0E-27 T 15-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Trad_0184 a4976f3e8ed7f313cfae2dfd1bda7507 168 SUPERFAMILY SSF52833 6 163 2.77E-51 T 15-10-2018 IPR036249 Thioredoxin-like superfamily Trad_0184 a4976f3e8ed7f313cfae2dfd1bda7507 168 Pfam PF00578 AhpC/TSA family 10 132 5.9E-38 T 15-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Trad_0184 a4976f3e8ed7f313cfae2dfd1bda7507 168 Gene3D G3DSA:3.40.30.10 3 157 1.5E-48 T 15-10-2018 Trad_2106 d7f15c16ff720c1c1ea63142cd8cbfe0 193 Hamap MF_01615 Pyridoxal 5'-phosphate synthase subunit PdxT [pdxT]. 6 189 34.942 T 15-10-2018 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 Trad_2106 d7f15c16ff720c1c1ea63142cd8cbfe0 193 TIGRFAM TIGR03800 PLP_synth_Pdx2: pyridoxal 5'-phosphate synthase, glutaminase subunit Pdx2 6 188 1.9E-61 T 15-10-2018 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 Trad_2106 d7f15c16ff720c1c1ea63142cd8cbfe0 193 SUPERFAMILY SSF52317 2 189 3.75E-47 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like Trad_2106 d7f15c16ff720c1c1ea63142cd8cbfe0 193 Pfam PF01174 SNO glutamine amidotransferase family 8 188 4.8E-56 T 15-10-2018 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 Trad_2106 d7f15c16ff720c1c1ea63142cd8cbfe0 193 ProSitePatterns PS01236 PdxT/SNO family family signature. 43 53 - T 15-10-2018 IPR021196 PdxT/SNO family, conserved site KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 Trad_2106 d7f15c16ff720c1c1ea63142cd8cbfe0 193 Gene3D G3DSA:3.40.50.880 1 192 1.8E-67 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like Trad_2106 d7f15c16ff720c1c1ea63142cd8cbfe0 193 PIRSF PIRSF005639 1 193 2.5E-67 T 15-10-2018 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 Trad_0202 d83f8ab0de4c1abf1ea50986f1cea068 230 Pfam PF04298 Putative neutral zinc metallopeptidase 13 227 1.5E-86 T 15-10-2018 IPR007395 Putative neutral zinc metallopeptidase Trad_0985 6bfdfcae715414131626f099efa314e0 91 Pfam PF10262 Rdx family 4 77 4.6E-33 T 15-10-2018 IPR011893 Selenoprotein, Rdx-type Trad_0985 6bfdfcae715414131626f099efa314e0 91 TIGRFAM TIGR02174 CXXU_selWTH: selT/selW/selH selenoprotein domain 5 76 2.9E-21 T 15-10-2018 IPR011893 Selenoprotein, Rdx-type Trad_0985 6bfdfcae715414131626f099efa314e0 91 Gene3D G3DSA:3.40.30.10 1 91 2.9E-42 T 15-10-2018 Trad_0985 6bfdfcae715414131626f099efa314e0 91 SUPERFAMILY SSF52833 1 86 9.17E-30 T 15-10-2018 IPR036249 Thioredoxin-like superfamily Trad_0262 c69995fb6f3be467c31d29dd946bc065 101 Gene3D G3DSA:3.30.2310.20 6 94 3.0E-10 T 15-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily Trad_0262 c69995fb6f3be467c31d29dd946bc065 101 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 9 93 7.1E-9 T 15-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family Trad_0588 d99b5df1e2569de7693d9a75c2c9d096 441 SUPERFAMILY SSF53850 33 431 5.31E-70 T 15-10-2018 Trad_0588 d99b5df1e2569de7693d9a75c2c9d096 441 Gene3D G3DSA:3.40.190.10 36 389 2.4E-110 T 15-10-2018 Trad_0588 d99b5df1e2569de7693d9a75c2c9d096 441 Gene3D G3DSA:3.40.190.10 147 427 2.4E-110 T 15-10-2018 Trad_0588 d99b5df1e2569de7693d9a75c2c9d096 441 Pfam PF13416 Bacterial extracellular solute-binding protein 53 361 1.7E-49 T 15-10-2018 IPR006059 Bacterial extracellular solute-binding protein Trad_0478 81e224990deb821024602cacb4e270e1 251 PRINTS PR00164 ABC-2 type transport system membrane protein signature 186 205 3.8E-8 T 15-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Trad_0478 81e224990deb821024602cacb4e270e1 251 PRINTS PR00164 ABC-2 type transport system membrane protein signature 166 185 3.8E-8 T 15-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Trad_0478 81e224990deb821024602cacb4e270e1 251 PRINTS PR00164 ABC-2 type transport system membrane protein signature 129 153 3.8E-8 T 15-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Trad_0478 81e224990deb821024602cacb4e270e1 251 Pfam PF01061 ABC-2 type transporter 1 207 6.4E-10 T 15-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 Trad_2679 d1e880ee6969ebd41a308b4977b7b56c 137 Pfam PF04039 Domain related to MnhB subunit of Na+/H+ antiporter 5 128 1.3E-32 T 15-10-2018 IPR007182 Na+/H+ antiporter MnhB subunit-related protein Trad_2779 1365bff766498013e8176762e62cb74d 298 Pfam PF01040 UbiA prenyltransferase family 26 266 1.8E-57 T 15-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 Trad_2779 1365bff766498013e8176762e62cb74d 298 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 9 296 19.232 T 15-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 Trad_2779 1365bff766498013e8176762e62cb74d 298 Gene3D G3DSA:1.10.357.140 19 174 3.1E-19 T 15-10-2018 Trad_2779 1365bff766498013e8176762e62cb74d 298 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 11 294 4.2E-92 T 15-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 Trad_1865 3d47507bf5e59297cc4436fbc44f5e06 340 Gene3D G3DSA:3.40.50.1820 81 323 9.7E-50 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold Trad_1865 3d47507bf5e59297cc4436fbc44f5e06 340 SUPERFAMILY SSF53474 90 319 6.61E-36 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold Trad_1865 3d47507bf5e59297cc4436fbc44f5e06 340 Pfam PF00756 Putative esterase 107 317 1.8E-26 T 15-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 Trad_2840 32901fedbc3cc69a561adb4b7ecb145e 265 Gene3D G3DSA:3.40.50.720 14 264 1.0E-88 T 15-10-2018 Trad_2840 32901fedbc3cc69a561adb4b7ecb145e 265 Pfam PF00899 ThiF family 21 259 3.6E-62 T 15-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 Trad_2840 32901fedbc3cc69a561adb4b7ecb145e 265 SUPERFAMILY SSF69572 11 262 3.01E-86 T 15-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 Trad_0376 5e5b6d289733be2f1251ea7b73201a86 682 Gene3D G3DSA:3.40.50.300 1 243 4.4E-46 T 15-10-2018 Trad_0376 5e5b6d289733be2f1251ea7b73201a86 682 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 247 424 3.8E-46 T 15-10-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 Trad_0376 5e5b6d289733be2f1251ea7b73201a86 682 SUPERFAMILY SSF52540 1 227 1.45E-47 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_0376 5e5b6d289733be2f1251ea7b73201a86 682 Gene3D G3DSA:3.40.50.880 247 393 7.9E-20 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like Trad_0376 5e5b6d289733be2f1251ea7b73201a86 682 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 1 222 1.0E-17 T 15-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain Trad_0376 5e5b6d289733be2f1251ea7b73201a86 682 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 484 666 5.0E-51 T 15-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 Trad_0376 5e5b6d289733be2f1251ea7b73201a86 682 SUPERFAMILY SSF52317 248 433 6.81E-33 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like Trad_0376 5e5b6d289733be2f1251ea7b73201a86 682 SUPERFAMILY SSF52540 483 669 9.78E-41 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_0376 5e5b6d289733be2f1251ea7b73201a86 682 TIGRFAM TIGR00313 cobQ: cobyric acid synthase CobQ 1 466 4.6E-133 T 15-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 Trad_0376 5e5b6d289733be2f1251ea7b73201a86 682 Hamap MF_00028 Cobyric acid synthase [cobQ]. 1 474 169.392 T 15-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 Trad_0376 5e5b6d289733be2f1251ea7b73201a86 682 Gene3D G3DSA:3.40.50.300 483 669 9.6E-54 T 15-10-2018 Trad_0145 da6cb43fdbdc7b872b5e9181c8c92b5d 294 SUPERFAMILY SSF51735 21 267 1.07E-69 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_0145 da6cb43fdbdc7b872b5e9181c8c92b5d 294 Gene3D G3DSA:3.40.50.720 3 293 1.0E-77 T 15-10-2018 Trad_0145 da6cb43fdbdc7b872b5e9181c8c92b5d 294 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 31 264 4.2E-50 T 15-10-2018 Trad_0145 da6cb43fdbdc7b872b5e9181c8c92b5d 294 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 162 3.6E-31 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_0145 da6cb43fdbdc7b872b5e9181c8c92b5d 294 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 23 40 3.6E-31 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_0145 da6cb43fdbdc7b872b5e9181c8c92b5d 294 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 98 109 3.6E-31 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_0145 da6cb43fdbdc7b872b5e9181c8c92b5d 294 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 229 249 3.6E-31 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_0145 da6cb43fdbdc7b872b5e9181c8c92b5d 294 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 191 3.6E-31 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_0145 da6cb43fdbdc7b872b5e9181c8c92b5d 294 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 193 210 3.6E-31 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_0145 da6cb43fdbdc7b872b5e9181c8c92b5d 294 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 160 8.7E-8 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_0145 da6cb43fdbdc7b872b5e9181c8c92b5d 294 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 98 109 8.7E-8 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_0145 da6cb43fdbdc7b872b5e9181c8c92b5d 294 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 172 191 8.7E-8 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_1387 7155d70b78b281bbbd4ad53de78e7bba 125 Gene3D G3DSA:3.10.490.10 2 124 1.8E-20 T 15-10-2018 Trad_1387 7155d70b78b281bbbd4ad53de78e7bba 125 SUPERFAMILY SSF110857 4 122 3.4E-23 T 15-10-2018 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily Trad_1387 7155d70b78b281bbbd4ad53de78e7bba 125 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 4 123 7.9E-24 T 15-10-2018 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like Trad_0537 86079c5a14a345fb1c2ee374e4e6c0d0 185 Gene3D G3DSA:2.40.33.20 26 184 2.5E-18 T 15-10-2018 Trad_0537 86079c5a14a345fb1c2ee374e4e6c0d0 185 SUPERFAMILY SSF50800 25 176 9.42E-31 T 15-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily Trad_0939 7fbd00b57c05b9082e2532eb7b1b6326 80 SUPERFAMILY SSF47598 3 55 5.93E-8 T 15-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 Trad_1808 e1f726144563686ce509b65369518b2c 229 Pfam PF13481 AAA domain 19 169 8.5E-11 T 15-10-2018 Trad_1808 e1f726144563686ce509b65369518b2c 229 Gene3D G3DSA:3.40.50.300 8 224 9.2E-11 T 15-10-2018 Trad_1065 614ba0cf536a185f12f1ee60e3c09b01 205 ProSitePatterns PS00632 Ribosomal protein S4 signature. 93 117 - T 15-10-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Trad_1065 614ba0cf536a185f12f1ee60e3c09b01 205 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 205 34.689 T 15-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 Trad_1065 614ba0cf536a185f12f1ee60e3c09b01 205 SMART SM00363 95 159 4.1E-19 T 15-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Trad_1065 614ba0cf536a185f12f1ee60e3c09b01 205 Gene3D G3DSA:3.10.290.10 94 190 2.8E-80 T 15-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Trad_1065 614ba0cf536a185f12f1ee60e3c09b01 205 Gene3D G3DSA:1.10.1050.10 6 205 2.8E-80 T 15-10-2018 Trad_1065 614ba0cf536a185f12f1ee60e3c09b01 205 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 205 3.1E-76 T 15-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 Trad_1065 614ba0cf536a185f12f1ee60e3c09b01 205 SUPERFAMILY SSF55174 3 205 8.9E-69 T 15-10-2018 Trad_1065 614ba0cf536a185f12f1ee60e3c09b01 205 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 94 1.8E-25 T 15-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 Trad_1065 614ba0cf536a185f12f1ee60e3c09b01 205 SMART SM01390 3 94 1.2E-40 T 15-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 Trad_1065 614ba0cf536a185f12f1ee60e3c09b01 205 Pfam PF01479 S4 domain 96 142 7.8E-21 T 15-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Trad_1012 189973b16b9a5c74144e636dd414f50a 419 Gene3D G3DSA:3.40.50.300 4 220 2.9E-50 T 15-10-2018 Trad_1012 189973b16b9a5c74144e636dd414f50a 419 Pfam PF00005 ABC transporter 23 170 5.6E-22 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Trad_1012 189973b16b9a5c74144e636dd414f50a 419 SMART SM00382 30 219 6.5E-10 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_1012 189973b16b9a5c74144e636dd414f50a 419 SUPERFAMILY SSF52540 6 221 4.79E-48 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_1557 64b4a6d241ec46815d81f74741123028 367 SUPERFAMILY SSF55729 4 362 4.67E-25 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase Trad_1557 64b4a6d241ec46815d81f74741123028 367 Gene3D G3DSA:3.40.630.30 1 367 1.9E-23 T 15-10-2018 Trad_0999 e817168e4f96fbc2d8ffc6f07d335aca 116 Gene3D G3DSA:2.30.30.110 1 116 4.8E-28 T 15-10-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor Trad_0999 e817168e4f96fbc2d8ffc6f07d335aca 116 SUPERFAMILY SSF50118 1 116 3.49E-25 T 15-10-2018 Trad_0999 e817168e4f96fbc2d8ffc6f07d335aca 116 PIRSF PIRSF033490 1 116 7.4E-34 T 15-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 Trad_0999 e817168e4f96fbc2d8ffc6f07d335aca 116 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 2 113 4.0E-21 T 15-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 Trad_0637 2badb3000bbe4b1185a829cc9bb6b801 557 Pfam PF02384 N-6 DNA Methylase 14 176 4.8E-7 T 15-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 Trad_0637 2badb3000bbe4b1185a829cc9bb6b801 557 Gene3D G3DSA:3.40.50.150 23 228 1.1E-27 T 15-10-2018 Trad_0637 2badb3000bbe4b1185a829cc9bb6b801 557 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 151 175 2.0E-17 T 15-10-2018 Trad_0637 2badb3000bbe4b1185a829cc9bb6b801 557 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 44 58 2.0E-17 T 15-10-2018 Trad_0637 2badb3000bbe4b1185a829cc9bb6b801 557 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 112 124 2.0E-17 T 15-10-2018 Trad_0637 2badb3000bbe4b1185a829cc9bb6b801 557 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 20 36 2.0E-17 T 15-10-2018 Trad_0637 2badb3000bbe4b1185a829cc9bb6b801 557 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 115 121 - T 15-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Trad_0637 2badb3000bbe4b1185a829cc9bb6b801 557 SUPERFAMILY SSF53335 14 225 8.18E-30 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Trad_0044 11729fd886f81c167a98b2dbaf426d0e 541 Pfam PF05598 Transposase domain (DUF772) 52 119 6.7E-17 T 15-10-2018 IPR008490 Transposase InsH, N-terminal Trad_0044 11729fd886f81c167a98b2dbaf426d0e 541 Pfam PF13751 Transposase DDE domain 396 519 8.9E-24 T 15-10-2018 IPR025668 Transposase DDE domain Trad_0226 a0bf4aa05ff40c0c75d3e2860d790525 244 Pfam PF02602 Uroporphyrinogen-III synthase HemD 17 225 7.5E-38 T 15-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Trad_0226 a0bf4aa05ff40c0c75d3e2860d790525 244 SUPERFAMILY SSF69618 3 229 1.05E-40 T 15-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Trad_0226 a0bf4aa05ff40c0c75d3e2860d790525 244 Gene3D G3DSA:3.40.50.10090 3 115 2.5E-17 T 15-10-2018 Trad_0226 a0bf4aa05ff40c0c75d3e2860d790525 244 Gene3D G3DSA:3.40.50.10090 121 231 1.6E-9 T 15-10-2018 Trad_2257 c041c3422e33bb12e2519fdb0a751714 229 SUPERFAMILY SSF48613 25 222 1.74E-29 T 15-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 Trad_2257 c041c3422e33bb12e2519fdb0a751714 229 Pfam PF03070 TENA/THI-4/PQQC family 21 223 1.7E-17 T 15-10-2018 IPR004305 Thiaminase-2/PQQC Trad_2257 c041c3422e33bb12e2519fdb0a751714 229 Gene3D G3DSA:1.20.910.10 19 226 3.1E-33 T 15-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 Trad_0013 e4e8d88563fcffbef4f7e2953dcb646e 327 PRINTS PR00625 DnaJ domain signature 8 26 1.2E-27 T 15-10-2018 IPR001623 DnaJ domain Trad_0013 e4e8d88563fcffbef4f7e2953dcb646e 327 PRINTS PR00625 DnaJ domain signature 63 82 1.2E-27 T 15-10-2018 IPR001623 DnaJ domain Trad_0013 e4e8d88563fcffbef4f7e2953dcb646e 327 PRINTS PR00625 DnaJ domain signature 26 41 1.2E-27 T 15-10-2018 IPR001623 DnaJ domain Trad_0013 e4e8d88563fcffbef4f7e2953dcb646e 327 PRINTS PR00625 DnaJ domain signature 43 63 1.2E-27 T 15-10-2018 IPR001623 DnaJ domain Trad_0013 e4e8d88563fcffbef4f7e2953dcb646e 327 Gene3D G3DSA:2.60.260.20 149 210 3.1E-17 T 15-10-2018 Trad_0013 e4e8d88563fcffbef4f7e2953dcb646e 327 SUPERFAMILY SSF49493 216 301 4.45E-17 T 15-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 Trad_0013 e4e8d88563fcffbef4f7e2953dcb646e 327 Gene3D G3DSA:2.60.260.20 212 321 5.1E-24 T 15-10-2018 Trad_0013 e4e8d88563fcffbef4f7e2953dcb646e 327 Pfam PF01556 DnaJ C terminal domain 154 290 1.3E-30 T 15-10-2018 IPR002939 Chaperone DnaJ, C-terminal Trad_0013 e4e8d88563fcffbef4f7e2953dcb646e 327 SUPERFAMILY SSF46565 2 118 2.62E-33 T 15-10-2018 IPR036869 Chaperone J-domain superfamily Trad_0013 e4e8d88563fcffbef4f7e2953dcb646e 327 ProSitePatterns PS00636 Nt-dnaJ domain signature. 48 67 - T 15-10-2018 IPR018253 DnaJ domain, conserved site Trad_0013 e4e8d88563fcffbef4f7e2953dcb646e 327 SMART SM00271 5 63 7.3E-31 T 15-10-2018 IPR001623 DnaJ domain Trad_0013 e4e8d88563fcffbef4f7e2953dcb646e 327 SUPERFAMILY SSF49493 147 217 9.42E-13 T 15-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 Trad_0013 e4e8d88563fcffbef4f7e2953dcb646e 327 Gene3D G3DSA:1.10.287.110 2 121 2.6E-36 T 15-10-2018 IPR036869 Chaperone J-domain superfamily Trad_0013 e4e8d88563fcffbef4f7e2953dcb646e 327 Pfam PF00226 DnaJ domain 6 68 3.4E-27 T 15-10-2018 IPR001623 DnaJ domain Trad_0808 4ca8b4b5c69bf6eabb7028de195d5dd9 234 SUPERFAMILY SSF52540 1 207 8.91E-57 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_0808 4ca8b4b5c69bf6eabb7028de195d5dd9 234 Gene3D G3DSA:3.40.50.300 1 216 5.6E-55 T 15-10-2018 Trad_0808 4ca8b4b5c69bf6eabb7028de195d5dd9 234 SMART SM00382 30 222 4.7E-9 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_0808 4ca8b4b5c69bf6eabb7028de195d5dd9 234 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Trad_0808 4ca8b4b5c69bf6eabb7028de195d5dd9 234 Pfam PF00005 ABC transporter 21 170 3.2E-26 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Trad_2359 ae036cfc873cfef7882aef77346ff705 301 Pfam PF02653 Branched-chain amino acid transport system / permease component 8 285 6.8E-33 T 15-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Trad_1164 a5f427836a67be17120a8024f44e202c 346 Pfam PF06999 Sucrase/ferredoxin-like 150 231 1.8E-14 T 15-10-2018 IPR009737 Thioredoxin-like ferredoxin Trad_1164 a5f427836a67be17120a8024f44e202c 346 PIRSF PIRSF035042 18 344 1.7E-69 T 15-10-2018 IPR010350 Thioredoxin-like ferredoxin, bacteria Trad_1164 a5f427836a67be17120a8024f44e202c 346 SUPERFAMILY SSF52833 159 231 6.26E-5 T 15-10-2018 IPR036249 Thioredoxin-like superfamily Trad_1261 e9a2ba7bf470041eb24c41a45123be68 160 Pfam PF04306 Protein of unknown function (DUF456) 23 154 9.1E-39 T 15-10-2018 IPR007403 Protein of unknown function DUF456 Trad_1093 bf03ffa84bf7ae58558cc2c3b7f7b841 369 SUPERFAMILY SSF51679 21 351 1.23E-83 T 15-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Trad_1093 bf03ffa84bf7ae58558cc2c3b7f7b841 369 Gene3D G3DSA:3.20.20.30 4 361 3.9E-109 T 15-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Trad_1093 bf03ffa84bf7ae58558cc2c3b7f7b841 369 Pfam PF00296 Luciferase-like monooxygenase 7 325 9.9E-73 T 15-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 Trad_1936 3fcb4632bb41dcc452732b7795adc3dc 121 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 6 50 2.0E-19 T 15-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 Trad_1936 3fcb4632bb41dcc452732b7795adc3dc 121 Pfam PF02416 mttA/Hcf106 family 6 56 2.7E-20 T 15-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 Trad_1936 3fcb4632bb41dcc452732b7795adc3dc 121 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 23 42 1.3E-5 T 15-10-2018 Trad_1936 3fcb4632bb41dcc452732b7795adc3dc 121 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 3 23 1.3E-5 T 15-10-2018 Trad_1936 3fcb4632bb41dcc452732b7795adc3dc 121 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 3 82 20.755 T 15-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 Trad_1835 4a92c521362f8c073dcc84898d148996 390 Pfam PF06187 Protein of unknown function (DUF993) 10 389 1.5E-181 T 15-10-2018 IPR009334 Protein of unknown function DUF993 Trad_1835 4a92c521362f8c073dcc84898d148996 390 SUPERFAMILY SSF51569 60 332 2.3E-9 T 15-10-2018 Trad_1835 4a92c521362f8c073dcc84898d148996 390 Gene3D G3DSA:3.20.20.500 7 385 1.8E-170 T 15-10-2018 Trad_0513 7c0b6ce42c7087669580a999d7181ce7 510 SUPERFAMILY SSF51703 15 508 4.19E-203 T 15-10-2018 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 Trad_0513 7c0b6ce42c7087669580a999d7181ce7 510 TIGRFAM TIGR00641 acid_CoA_mut_N: methylmalonyl-CoA mutase N-terminal domain 12 509 3.3E-229 T 15-10-2018 IPR006098 Methylmalonyl-CoA mutase, alpha chain, catalytic GO:0004494|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 Trad_0513 7c0b6ce42c7087669580a999d7181ce7 510 Gene3D G3DSA:3.20.20.240 3 510 1.3E-229 T 15-10-2018 Trad_0513 7c0b6ce42c7087669580a999d7181ce7 510 Pfam PF01642 Methylmalonyl-CoA mutase 15 506 1.6E-214 T 15-10-2018 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0016866|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 Trad_1875 2c8a3a97c91d948be6a88e64a000fff4 279 Pfam PF01026 TatD related DNase 57 213 2.1E-6 T 15-10-2018 IPR001130 TatD family GO:0016788 Trad_1875 2c8a3a97c91d948be6a88e64a000fff4 279 PIRSF PIRSF005295 1 257 1.4E-73 T 15-10-2018 IPR012022 Protein of unknown function UCP005295 Trad_1875 2c8a3a97c91d948be6a88e64a000fff4 279 SUPERFAMILY SSF51556 1 254 9.77E-33 T 15-10-2018 IPR032466 Metal-dependent hydrolase Trad_1875 2c8a3a97c91d948be6a88e64a000fff4 279 Gene3D G3DSA:3.20.20.140 1 261 3.9E-35 T 15-10-2018 Trad_0141 6cc4f331e20fd547d14227110d6735c3 275 Gene3D G3DSA:3.30.950.10 108 226 9.8E-37 T 15-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 Trad_0141 6cc4f331e20fd547d14227110d6735c3 275 PIRSF PIRSF005917 1 273 4.2E-86 T 15-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 Trad_0141 6cc4f331e20fd547d14227110d6735c3 275 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 4 224 3.3E-63 T 15-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 Trad_0141 6cc4f331e20fd547d14227110d6735c3 275 SUPERFAMILY SSF53790 3 218 5.5E-70 T 15-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 Trad_0141 6cc4f331e20fd547d14227110d6735c3 275 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 3 200 3.2E-28 T 15-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 Trad_0141 6cc4f331e20fd547d14227110d6735c3 275 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 3 220 34.091 T 15-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 Trad_0141 6cc4f331e20fd547d14227110d6735c3 275 Gene3D G3DSA:3.40.1010.10 1 107 2.7E-32 T 15-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 Trad_1135 a0ef21ec1980ba92ca15b11c44a43383 309 Gene3D G3DSA:3.40.800.20 16 303 5.6E-59 T 15-10-2018 IPR037138 Histone deacetylase domain superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 Trad_1135 a0ef21ec1980ba92ca15b11c44a43383 309 PRINTS PR01270 Histone deacetylase superfamily signature 155 170 1.6E-12 T 15-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 Trad_1135 a0ef21ec1980ba92ca15b11c44a43383 309 PRINTS PR01270 Histone deacetylase superfamily signature 229 239 1.6E-12 T 15-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 Trad_1135 a0ef21ec1980ba92ca15b11c44a43383 309 PRINTS PR01270 Histone deacetylase superfamily signature 121 144 1.6E-12 T 15-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 Trad_1135 a0ef21ec1980ba92ca15b11c44a43383 309 Pfam PF00850 Histone deacetylase domain 32 285 1.3E-42 T 15-10-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 Trad_1135 a0ef21ec1980ba92ca15b11c44a43383 309 SUPERFAMILY SSF52768 17 287 1.49E-69 T 15-10-2018 IPR023696 Ureohydrolase domain superfamily Trad_2845 871c7bbf9c20bc9cc2725ba68fe25fb2 453 SUPERFAMILY SSF51261 250 446 6.8E-15 T 15-10-2018 IPR011055 Duplicated hybrid motif Trad_2845 871c7bbf9c20bc9cc2725ba68fe25fb2 453 Gene3D G3DSA:2.70.70.10 312 447 4.6E-13 T 15-10-2018 IPR011055 Duplicated hybrid motif Trad_2845 871c7bbf9c20bc9cc2725ba68fe25fb2 453 Pfam PF01551 Peptidase family M23 354 418 1.8E-12 T 15-10-2018 IPR016047 Peptidase M23 Trad_0533 9877de90bf5c16a02b5bc080db901364 129 Gene3D G3DSA:1.20.1270.360 15 126 3.8E-26 T 15-10-2018 Trad_0533 9877de90bf5c16a02b5bc080db901364 129 Pfam PF03860 Domain of Unknown Function (DUF326) 45 64 4.6E-5 T 15-10-2018 IPR005560 Protein of unknown function DUF326 Trad_2425 b4e366f90a8594b65113805d419becb5 243 Pfam PF04474 Protein of unknown function (DUF554) 9 235 2.7E-72 T 15-10-2018 IPR007563 Protein of unknown function DUF554 Trad_0099 203676aa122314b0db1261496e6099cf 168 Gene3D G3DSA:3.90.79.10 8 146 4.8E-24 T 15-10-2018 Trad_0099 203676aa122314b0db1261496e6099cf 168 SUPERFAMILY SSF55811 12 139 5.28E-22 T 15-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Trad_0099 203676aa122314b0db1261496e6099cf 168 Pfam PF00293 NUDIX domain 14 135 4.3E-15 T 15-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Trad_0820 1b699e5458b7e6aca116ef87250b6019 147 Gene3D G3DSA:3.40.630.30 7 147 7.6E-54 T 15-10-2018 Trad_0820 1b699e5458b7e6aca116ef87250b6019 147 SUPERFAMILY SSF55729 34 144 2.79E-25 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase Trad_0820 1b699e5458b7e6aca116ef87250b6019 147 Pfam PF09390 Protein of unknown function (DUF1999) 36 147 6.5E-28 T 15-10-2018 IPR018987 Protein of unknown function DUF1999 Trad_0380 894976db946bb58db6b1cb926748f31d 188 Gene3D G3DSA:3.40.50.300 4 188 9.2E-65 T 15-10-2018 Trad_0380 894976db946bb58db6b1cb926748f31d 188 PIRSF PIRSF015617 3 188 1.9E-63 T 15-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 Trad_0380 894976db946bb58db6b1cb926748f31d 188 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 19 187 2.1E-60 T 15-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 Trad_0380 894976db946bb58db6b1cb926748f31d 188 TIGRFAM TIGR00708 cobA: cob(I)yrinic acid a,c-diamide adenosyltransferase 17 188 6.0E-60 T 15-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 Trad_0380 894976db946bb58db6b1cb926748f31d 188 SUPERFAMILY SSF52540 17 187 2.02E-63 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_0102 50d2b4ae1d2690574f23965d06a6f9e7 227 Pfam PF02397 Bacterial sugar transferase 27 201 2.2E-59 T 15-10-2018 IPR003362 Bacterial sugar transferase Trad_1921 8aa465a561c4f23f20aa53d927630e11 320 TIGRFAM TIGR03557 F420_G6P_family: F420-dependent oxidoreductase, G6PDH family 4 318 9.2E-87 T 15-10-2018 IPR019945 F420-dependent glucose-6-phosphate dehydrogenase-related Trad_1921 8aa465a561c4f23f20aa53d927630e11 320 Gene3D G3DSA:3.20.20.30 1 319 1.2E-62 T 15-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Trad_1921 8aa465a561c4f23f20aa53d927630e11 320 SUPERFAMILY SSF51679 3 319 9.94E-59 T 15-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Trad_1921 8aa465a561c4f23f20aa53d927630e11 320 TIGRFAM TIGR03885 flavin_revert: probable non-F420 flavinoid oxidoreductase 4 318 1.5E-147 T 15-10-2018 IPR023907 Non-F420 flavinoid oxidoreductase Trad_1921 8aa465a561c4f23f20aa53d927630e11 320 Pfam PF00296 Luciferase-like monooxygenase 9 292 6.1E-46 T 15-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 Trad_1834 cc08f84033aa6cefe270014c6ae2c5eb 280 Gene3D G3DSA:3.20.20.150 3 278 2.4E-64 T 15-10-2018 Trad_1834 cc08f84033aa6cefe270014c6ae2c5eb 280 SUPERFAMILY SSF51658 8 268 3.8E-52 T 15-10-2018 IPR036237 Xylose isomerase-like superfamily Trad_1834 cc08f84033aa6cefe270014c6ae2c5eb 280 Pfam PF01261 Xylose isomerase-like TIM barrel 27 232 2.5E-27 T 15-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain Trad_2875 9aa563499e0a8d9feca856c78e555ab8 437 Pfam PF01594 AI-2E family transporter 26 379 1.9E-59 T 15-10-2018 IPR002549 Transmembrane protein TqsA-like Trad_0361 4626f329a6007575f1b4bb6baec657eb 256 Gene3D G3DSA:2.120.10.30 49 214 5.7E-11 T 15-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like Trad_0361 4626f329a6007575f1b4bb6baec657eb 256 SUPERFAMILY SSF69304 58 175 9.02E-13 T 15-10-2018 Trad_1683 ac76989bca4dbc23ae5175a1966d8b47 117 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 7 93 1.6E-19 T 15-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like Trad_2711 ef7be0e476ce4dbe1d6aff81360c8f9d 1091 Pfam PF13020 Domain of unknown function (DUF3883) 977 1059 3.4E-14 T 15-10-2018 IPR024975 Domain of unknown function DUF3883 Trad_2711 ef7be0e476ce4dbe1d6aff81360c8f9d 1091 SUPERFAMILY SSF52540 220 615 6.5E-52 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_2711 ef7be0e476ce4dbe1d6aff81360c8f9d 1091 SMART SM00490 497 577 5.6E-25 T 15-10-2018 IPR001650 Helicase, C-terminal Trad_2711 ef7be0e476ce4dbe1d6aff81360c8f9d 1091 SUPERFAMILY SSF52540 73 295 7.77E-36 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_2711 ef7be0e476ce4dbe1d6aff81360c8f9d 1091 Pfam PF00176 SNF2 family N-terminal domain 124 356 3.1E-18 T 15-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 Trad_2711 ef7be0e476ce4dbe1d6aff81360c8f9d 1091 SMART SM00487 99 299 8.1E-20 T 15-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Trad_2711 ef7be0e476ce4dbe1d6aff81360c8f9d 1091 Gene3D G3DSA:3.40.50.10810 99 323 7.3E-64 T 15-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily Trad_2711 ef7be0e476ce4dbe1d6aff81360c8f9d 1091 Pfam PF00271 Helicase conserved C-terminal domain 469 577 1.5E-22 T 15-10-2018 IPR001650 Helicase, C-terminal Trad_2902 a5ee3cd24ebe260fab5c391b4dcbf8cd 399 Pfam PF07690 Major Facilitator Superfamily 23 355 3.7E-27 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Trad_2902 a5ee3cd24ebe260fab5c391b4dcbf8cd 399 Gene3D G3DSA:1.20.1250.20 204 397 8.1E-12 T 15-10-2018 Trad_2902 a5ee3cd24ebe260fab5c391b4dcbf8cd 399 SUPERFAMILY SSF103473 20 395 6.28E-43 T 15-10-2018 IPR036259 MFS transporter superfamily Trad_2902 a5ee3cd24ebe260fab5c391b4dcbf8cd 399 Gene3D G3DSA:1.20.1250.20 17 198 2.1E-22 T 15-10-2018 Trad_0794 bbb175f2f57451880b9a444c8bd6d83e 258 Gene3D G3DSA:3.40.50.720 4 256 5.1E-79 T 15-10-2018 Trad_0794 bbb175f2f57451880b9a444c8bd6d83e 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 2.9E-7 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_0794 bbb175f2f57451880b9a444c8bd6d83e 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 2.9E-7 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_0794 bbb175f2f57451880b9a444c8bd6d83e 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 2.9E-7 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_0794 bbb175f2f57451880b9a444c8bd6d83e 258 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 251 6.1E-57 T 15-10-2018 Trad_0794 bbb175f2f57451880b9a444c8bd6d83e 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 4.7E-34 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_0794 bbb175f2f57451880b9a444c8bd6d83e 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 4.7E-34 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_0794 bbb175f2f57451880b9a444c8bd6d83e 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 4.7E-34 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_0794 bbb175f2f57451880b9a444c8bd6d83e 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 4.7E-34 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_0794 bbb175f2f57451880b9a444c8bd6d83e 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 4.7E-34 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_0794 bbb175f2f57451880b9a444c8bd6d83e 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 4.7E-34 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_0794 bbb175f2f57451880b9a444c8bd6d83e 258 SUPERFAMILY SSF51735 2 255 2.5E-74 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_2666 9e04951ef62a224c833a6ca0ac45da38 364 SUPERFAMILY SSF55031 170 274 5.76E-13 T 15-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain Trad_2666 9e04951ef62a224c833a6ca0ac45da38 364 Pfam PF01546 Peptidase family M20/M25/M40 68 359 2.1E-17 T 15-10-2018 IPR002933 Peptidase M20 GO:0016787 Trad_2666 9e04951ef62a224c833a6ca0ac45da38 364 SUPERFAMILY SSF53187 11 362 6.0E-42 T 15-10-2018 Trad_2666 9e04951ef62a224c833a6ca0ac45da38 364 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 67 76 - T 15-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 Trad_2666 9e04951ef62a224c833a6ca0ac45da38 364 Gene3D G3DSA:3.30.70.360 172 278 3.1E-15 T 15-10-2018 Trad_2666 9e04951ef62a224c833a6ca0ac45da38 364 Pfam PF07687 Peptidase dimerisation domain 169 267 1.2E-11 T 15-10-2018 IPR011650 Peptidase M20, dimerisation domain Trad_1698 840f85d01887217081239594c9e3de99 382 Gene3D G3DSA:3.40.50.2300 124 367 3.7E-102 T 15-10-2018 Trad_1698 840f85d01887217081239594c9e3de99 382 Gene3D G3DSA:3.40.50.2300 24 282 3.7E-102 T 15-10-2018 Trad_1698 840f85d01887217081239594c9e3de99 382 SUPERFAMILY SSF53822 36 223 3.63E-7 T 15-10-2018 IPR028082 Periplasmic binding protein-like I Trad_1698 840f85d01887217081239594c9e3de99 382 Pfam PF02608 ABC transporter substrate-binding protein PnrA-like 23 286 5.5E-42 T 15-10-2018 IPR003760 ABC transporter substrate-binding protein PnrA-like GO:0005886 Trad_1894 d3cc729f5352848f7c0968252ca37842 129 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 10 119 6.0E-20 T 15-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 Trad_1894 d3cc729f5352848f7c0968252ca37842 129 Pfam PF03061 Thioesterase superfamily 40 112 1.0E-15 T 15-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 Trad_1894 d3cc729f5352848f7c0968252ca37842 129 TIGRFAM TIGR02286 PaaD: phenylacetic acid degradation protein PaaD 12 122 2.9E-40 T 15-10-2018 IPR011973 Phenylacetic acid degradation protein PaaD GO:0016790 Trad_1894 d3cc729f5352848f7c0968252ca37842 129 SUPERFAMILY SSF54637 8 121 6.35E-30 T 15-10-2018 IPR029069 HotDog domain superfamily Trad_1894 d3cc729f5352848f7c0968252ca37842 129 Gene3D G3DSA:3.10.129.10 8 122 7.4E-39 T 15-10-2018 Trad_2823 9295ef1b969ffae35e1b9c0b60fcdee4 266 SUPERFAMILY SSF51735 8 258 4.07E-67 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_2823 9295ef1b969ffae35e1b9c0b60fcdee4 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 179 2.3E-12 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2823 9295ef1b969ffae35e1b9c0b60fcdee4 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 2.3E-12 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2823 9295ef1b969ffae35e1b9c0b60fcdee4 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 134 150 2.3E-12 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2823 9295ef1b969ffae35e1b9c0b60fcdee4 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 181 198 2.3E-12 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2823 9295ef1b969ffae35e1b9c0b60fcdee4 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 2.3E-12 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2823 9295ef1b969ffae35e1b9c0b60fcdee4 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 2.3E-12 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2823 9295ef1b969ffae35e1b9c0b60fcdee4 266 Gene3D G3DSA:3.40.50.720 9 202 5.9E-45 T 15-10-2018 Trad_2823 9295ef1b969ffae35e1b9c0b60fcdee4 266 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 254 2.1E-82 T 15-10-2018 Trad_2823 9295ef1b969ffae35e1b9c0b60fcdee4 266 PIRSF PIRSF000094 3 261 1.3E-91 T 15-10-2018 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Trad_2823 9295ef1b969ffae35e1b9c0b60fcdee4 266 Gene3D G3DSA:1.10.8.400 203 259 2.2E-11 T 15-10-2018 Trad_2232 6397913a771afdcea2a8d7479e554888 309 Pfam PF01497 Periplasmic binding protein 3 266 1.1E-16 T 15-10-2018 IPR002491 ABC transporter periplasmic binding domain Trad_2232 6397913a771afdcea2a8d7479e554888 309 Gene3D G3DSA:3.40.50.1980 1 155 2.4E-26 T 15-10-2018 Trad_2232 6397913a771afdcea2a8d7479e554888 309 Gene3D G3DSA:3.40.50.1980 157 290 1.6E-20 T 15-10-2018 Trad_2232 6397913a771afdcea2a8d7479e554888 309 SUPERFAMILY SSF53807 2 288 7.46E-41 T 15-10-2018 Trad_0508 306e06f7e2439ca6cadf7a563286faff 357 PIRSF PIRSF017617 12 357 2.0E-126 T 15-10-2018 IPR023603 Threonine aldolase Trad_0508 306e06f7e2439ca6cadf7a563286faff 357 SUPERFAMILY SSF53383 20 354 5.03E-113 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Trad_0508 306e06f7e2439ca6cadf7a563286faff 357 Gene3D G3DSA:3.90.1150.10 264 354 4.8E-24 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Trad_0508 306e06f7e2439ca6cadf7a563286faff 357 Pfam PF01212 Beta-eliminating lyase 21 301 1.7E-93 T 15-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 Trad_0508 306e06f7e2439ca6cadf7a563286faff 357 Gene3D G3DSA:3.40.640.10 15 263 3.5E-87 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Trad_1187 1e6a937b74e8c43e7ad5c4a0201cb871 91 Pfam PF11609 Protein of unknown function (DUF3248) 24 88 6.4E-29 T 15-10-2018 IPR021650 Protein of unknown function DUF3248 Trad_1187 1e6a937b74e8c43e7ad5c4a0201cb871 91 Gene3D G3DSA:3.10.20.570 19 90 1.2E-30 T 15-10-2018 Trad_1509 d88272d6a87bee4bead38f8c02d2e6cd 321 Pfam PF01758 Sodium Bile acid symporter family 36 219 4.9E-25 T 15-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 Trad_1509 d88272d6a87bee4bead38f8c02d2e6cd 321 Gene3D G3DSA:1.20.1530.20 1 306 1.3E-34 T 15-10-2018 IPR038770 Sodium/solute symporter superfamily Trad_2222 ac903a80898151b9a51021c7c48ccaaf 103 SUPERFAMILY SSF52833 11 92 8.83E-15 T 15-10-2018 IPR036249 Thioredoxin-like superfamily Trad_2222 ac903a80898151b9a51021c7c48ccaaf 103 Gene3D G3DSA:3.40.30.10 10 99 4.0E-14 T 15-10-2018 Trad_2789 347c3e7922debd9bd35cf9f183082976 189 Pfam PF02620 Uncharacterized ACR, COG1399 65 187 5.3E-20 T 15-10-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD Trad_2712 6f9e8b0e107badf4afb92f51178455f3 78 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 3 38 1.2E-13 T 15-10-2018 Trad_2712 6f9e8b0e107badf4afb92f51178455f3 78 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 40 9.1E-13 T 15-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM Trad_2712 6f9e8b0e107badf4afb92f51178455f3 78 Gene3D G3DSA:3.40.1620.10 1 38 6.8E-13 T 15-10-2018 Trad_2712 6f9e8b0e107badf4afb92f51178455f3 78 SUPERFAMILY SSF143120 1 42 1.2E-10 T 15-10-2018 IPR036165 YefM-like superfamily Trad_2934 ef2923d78fd21197ec1681f06e321d44 342 Pfam PF01368 DHH family 26 167 6.4E-9 T 15-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Trad_2934 ef2923d78fd21197ec1681f06e321d44 342 Gene3D G3DSA:3.10.310.30 211 332 1.0E-19 T 15-10-2018 Trad_2934 ef2923d78fd21197ec1681f06e321d44 342 Pfam PF02272 DHHA1 domain 264 315 2.5E-7 T 15-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 Trad_2934 ef2923d78fd21197ec1681f06e321d44 342 Gene3D G3DSA:3.90.1640.10 12 210 5.5E-43 T 15-10-2018 Trad_2934 ef2923d78fd21197ec1681f06e321d44 342 SUPERFAMILY SSF64182 26 312 7.59E-50 T 15-10-2018 IPR038763 DHH phosphoesterase superfamily Trad_0260 a1c9984048bbe9c9dabd389842f50629 105 SUPERFAMILY SSF50022 5 102 3.01E-27 T 15-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 Trad_0260 a1c9984048bbe9c9dabd389842f50629 105 Pfam PF00355 Rieske [2Fe-2S] domain 6 85 1.0E-15 T 15-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 Trad_0260 a1c9984048bbe9c9dabd389842f50629 105 Gene3D G3DSA:2.102.10.10 1 105 2.3E-30 T 15-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 Trad_2430 de54f74c8be1fdc7d8065d218fc7d2a2 406 Pfam PF07690 Major Facilitator Superfamily 12 229 2.0E-32 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Trad_2430 de54f74c8be1fdc7d8065d218fc7d2a2 406 Gene3D G3DSA:1.20.1250.20 2 402 7.8E-52 T 15-10-2018 Trad_2430 de54f74c8be1fdc7d8065d218fc7d2a2 406 SUPERFAMILY SSF103473 2 399 1.57E-59 T 15-10-2018 IPR036259 MFS transporter superfamily Trad_0079 c0b9251aee6513beb860e667f1d7dfc1 557 Gene3D G3DSA:2.60.40.1120 38 118 3.5E-12 T 15-10-2018 Trad_0079 c0b9251aee6513beb860e667f1d7dfc1 557 Pfam PF13620 Carboxypeptidase regulatory-like domain 40 114 4.7E-12 T 15-10-2018 Trad_0079 c0b9251aee6513beb860e667f1d7dfc1 557 SUPERFAMILY SSF49464 39 111 3.02E-14 T 15-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily Trad_0027 f67de16d2e806f452762774cf56cd52e 431 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 81 229 2.2E-25 T 15-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain Trad_0027 f67de16d2e806f452762774cf56cd52e 431 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 81 229 7.6E-24 T 15-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain Trad_0027 f67de16d2e806f452762774cf56cd52e 431 Gene3D G3DSA:1.10.260.150 46 314 2.1E-41 T 15-10-2018 Trad_0290 8e49ac00d7b73b669af276384ceeb3ee 159 Pfam PF05145 Transition state regulatory protein AbrB 3 156 7.6E-27 T 15-10-2018 IPR007820 AbrB family GO:0010468|GO:0016021 Trad_0290 8e49ac00d7b73b669af276384ceeb3ee 159 TIGRFAM TIGR03082 Gneg_AbrB_dup: membrane protein AbrB duplication 3 156 5.7E-32 T 15-10-2018 IPR017516 AbrB duplication Trad_0682 8c2acbd23d9f30587f0739208a1fd434 212 Gene3D G3DSA:3.40.50.2020 3 212 1.4E-79 T 15-10-2018 Trad_0682 8c2acbd23d9f30587f0739208a1fd434 212 SUPERFAMILY SSF53271 7 210 5.86E-68 T 15-10-2018 IPR029057 Phosphoribosyltransferase-like Trad_0682 8c2acbd23d9f30587f0739208a1fd434 212 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 7 211 2.1E-83 T 15-10-2018 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 Trad_0682 8c2acbd23d9f30587f0739208a1fd434 212 Pfam PF14681 Uracil phosphoribosyltransferase 9 211 1.7E-73 T 15-10-2018 Trad_0682 8c2acbd23d9f30587f0739208a1fd434 212 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 6 212 45.603 T 15-10-2018 IPR034332 Uracil phosphoribosyltransferase, bacterial-type KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 Trad_1693 5c5d96aafecc6dfdf5907c1d96c2d376 287 Gene3D G3DSA:3.60.20.10 4 213 1.1E-78 T 15-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Trad_1693 5c5d96aafecc6dfdf5907c1d96c2d376 287 SUPERFAMILY SSF56235 6 225 1.31E-69 T 15-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Trad_1693 5c5d96aafecc6dfdf5907c1d96c2d376 287 Pfam PF06267 Family of unknown function (DUF1028) 6 200 2.2E-76 T 15-10-2018 IPR010430 Protein of unknown function DUF1028 Trad_1693 5c5d96aafecc6dfdf5907c1d96c2d376 287 Pfam PF08823 Putative peptidoglycan binding domain 211 282 7.7E-13 T 15-10-2018 IPR014927 Putative peptidoglycan binding Trad_0502 ae0c9de4b904f6fa33dc7933229a57ff 306 SUPERFAMILY SSF56235 14 293 4.89E-71 T 15-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Trad_0502 ae0c9de4b904f6fa33dc7933229a57ff 306 Gene3D G3DSA:3.60.20.30 170 299 2.8E-40 T 15-10-2018 Trad_0502 ae0c9de4b904f6fa33dc7933229a57ff 306 Pfam PF01112 Asparaginase 14 296 1.8E-77 T 15-10-2018 IPR000246 Peptidase T2, asparaginase 2 GO:0016787 Trad_0957 834787a61d309ccc19313b9d7d211053 97 SUPERFAMILY SSF47598 22 64 1.78E-7 T 15-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 Trad_0957 834787a61d309ccc19313b9d7d211053 97 Pfam PF01402 Ribbon-helix-helix protein, copG family 26 64 1.9E-5 T 15-10-2018 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 Trad_2289 75812ab71afaad4a6895ca7ad394356e 403 Gene3D G3DSA:1.10.3720.10 178 398 1.3E-19 T 15-10-2018 IPR035906 MetI-like superfamily Trad_2289 75812ab71afaad4a6895ca7ad394356e 403 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 208 402 2.1E-27 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Trad_2289 75812ab71afaad4a6895ca7ad394356e 403 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 27 79 1.6E-12 T 15-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain Trad_2289 75812ab71afaad4a6895ca7ad394356e 403 SUPERFAMILY SSF161098 186 385 2.75E-23 T 15-10-2018 IPR035906 MetI-like superfamily Trad_1301 58d8d63fd532aa024fd778e577f145a4 489 SUPERFAMILY SSF52425 56 217 4.84E-31 T 15-10-2018 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily Reactome: R-HSA-400253 Trad_1301 58d8d63fd532aa024fd778e577f145a4 489 Gene3D G3DSA:1.25.40.80 179 343 2.6E-44 T 15-10-2018 Trad_1301 58d8d63fd532aa024fd778e577f145a4 489 SUPERFAMILY SSF48173 241 484 6.41E-59 T 15-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 Trad_1301 58d8d63fd532aa024fd778e577f145a4 489 Gene3D G3DSA:1.10.579.10 344 489 1.3E-64 T 15-10-2018 Trad_1301 58d8d63fd532aa024fd778e577f145a4 489 Pfam PF00875 DNA photolyase 57 213 9.9E-22 T 15-10-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-400253 Trad_1301 58d8d63fd532aa024fd778e577f145a4 489 Gene3D G3DSA:3.40.50.620 33 177 1.4E-39 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Trad_1750 f7aeefef97155dc8c82544eb4a3b6ba6 96 Pfam PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) 31 79 6.5E-10 T 15-10-2018 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 Trad_2206 0b8b1279f51a48531d0fb50d11c1a564 198 SUPERFAMILY SSF52016 5 177 5.89E-49 T 15-10-2018 Trad_2206 0b8b1279f51a48531d0fb50d11c1a564 198 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 5 188 4.8E-39 T 15-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 Trad_2206 0b8b1279f51a48531d0fb50d11c1a564 198 Pfam PF00694 Aconitase C-terminal domain 18 117 2.6E-20 T 15-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 Trad_2206 0b8b1279f51a48531d0fb50d11c1a564 198 Gene3D G3DSA:3.20.19.10 1 179 1.4E-55 T 15-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 Trad_0487 d596c5219abf3b95182dc0f934fdad4d 83 Gene3D G3DSA:3.10.290.10 3 73 3.6E-25 T 15-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Trad_0487 d596c5219abf3b95182dc0f934fdad4d 83 SUPERFAMILY SSF55174 10 71 2.36E-19 T 15-10-2018 Trad_0487 d596c5219abf3b95182dc0f934fdad4d 83 SMART SM00363 17 78 1.2E-6 T 15-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Trad_0487 d596c5219abf3b95182dc0f934fdad4d 83 Pfam PF13275 S4 domain 15 71 3.7E-24 T 15-10-2018 Trad_0586 c7311b0486464f0db48e9b5bb8dc8fa4 296 SUPERFAMILY SSF161098 3 294 7.06E-52 T 15-10-2018 IPR035906 MetI-like superfamily Trad_0586 c7311b0486464f0db48e9b5bb8dc8fa4 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 81 285 1.4E-16 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Trad_0586 c7311b0486464f0db48e9b5bb8dc8fa4 296 Gene3D G3DSA:1.10.3720.10 2 284 9.8E-47 T 15-10-2018 IPR035906 MetI-like superfamily Trad_1417 4602626db9d2b3b7ae6ba4838d5cfa36 280 Gene3D G3DSA:1.10.3720.10 9 278 9.6E-40 T 15-10-2018 IPR035906 MetI-like superfamily Trad_1417 4602626db9d2b3b7ae6ba4838d5cfa36 280 SUPERFAMILY SSF161098 5 275 1.44E-41 T 15-10-2018 IPR035906 MetI-like superfamily Trad_1417 4602626db9d2b3b7ae6ba4838d5cfa36 280 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 100 273 3.6E-12 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Trad_1506 3bd00e47a9b42c2389190c54e1812137 268 SUPERFAMILY SSF51182 10 261 2.29E-54 T 15-10-2018 IPR011051 RmlC-like cupin domain superfamily Trad_1506 3bd00e47a9b42c2389190c54e1812137 268 Gene3D G3DSA:2.60.120.10 3 263 3.7E-85 T 15-10-2018 IPR014710 RmlC-like jelly roll fold Trad_1562 9a188af6cf91524443366be6f11b7542 355 TIGRFAM TIGR00374 TIGR00374: TIGR00374 family protein 30 331 1.0E-24 T 15-10-2018 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD Trad_1562 9a188af6cf91524443366be6f11b7542 355 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 31 330 5.3E-23 T 15-10-2018 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD Trad_2159 867f32f83ebadafee0bbae58463876dc 319 SUPERFAMILY SSF56300 2 205 4.47E-11 T 15-10-2018 Trad_2408 abae70b931213789227c541a9254aebc 154 ProSitePatterns PS00893 Nudix box signature. 35 56 - T 15-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 Trad_2408 abae70b931213789227c541a9254aebc 154 Pfam PF00293 NUDIX domain 12 127 3.7E-11 T 15-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Trad_2408 abae70b931213789227c541a9254aebc 154 Gene3D G3DSA:3.90.79.10 2 147 1.0E-29 T 15-10-2018 Trad_2408 abae70b931213789227c541a9254aebc 154 SUPERFAMILY SSF55811 8 145 6.77E-19 T 15-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Trad_1770 f0353c6b6024365bd2563f307c8d1c73 122 SUPERFAMILY SSF81296 41 115 9.2E-5 T 15-10-2018 IPR014756 Immunoglobulin E-set Trad_1770 f0353c6b6024365bd2563f307c8d1c73 122 Gene3D G3DSA:2.60.40.10 29 120 6.7E-7 T 15-10-2018 IPR013783 Immunoglobulin-like fold Trad_1579 d8931174d701641f96be21e8166f4ae0 144 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 21 131 1.7E-19 T 15-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 Trad_1579 d8931174d701641f96be21e8166f4ae0 144 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 20 137 16.829 T 15-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 Trad_2635 bd316e5934f643cbfdf5cd8eb55799ca 315 SUPERFAMILY SSF48576 2 313 2.88E-81 T 15-10-2018 IPR008949 Isoprenoid synthase domain superfamily Trad_2635 bd316e5934f643cbfdf5cd8eb55799ca 315 Pfam PF00348 Polyprenyl synthetase 29 266 3.5E-64 T 15-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 Trad_2635 bd316e5934f643cbfdf5cd8eb55799ca 315 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 76 90 - T 15-10-2018 IPR033749 Polyprenyl synthetase, conserved site Trad_2635 bd316e5934f643cbfdf5cd8eb55799ca 315 Gene3D G3DSA:1.10.600.10 1 315 2.1E-91 T 15-10-2018 IPR008949 Isoprenoid synthase domain superfamily Trad_2635 bd316e5934f643cbfdf5cd8eb55799ca 315 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 198 210 - T 15-10-2018 IPR033749 Polyprenyl synthetase, conserved site Trad_2608 3cf89f4c2d29bd774d519f9bec90140c 275 Pfam PF04468 PSP1 C-terminal conserved region 59 140 1.4E-11 T 15-10-2018 IPR007557 PSP1, C-terminal Trad_0674 cf3581ace81193671c585a7cb97f3522 198 PIRSF PIRSF000709 2 195 3.3E-15 T 15-10-2018 Trad_0674 cf3581ace81193671c585a7cb97f3522 198 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 6 194 4.4E-59 T 15-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Trad_0674 cf3581ace81193671c585a7cb97f3522 198 SUPERFAMILY SSF53254 1 197 9.56E-60 T 15-10-2018 IPR029033 Histidine phosphatase superfamily Trad_0674 cf3581ace81193671c585a7cb97f3522 198 SMART SM00855 5 154 2.0E-21 T 15-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Trad_0674 cf3581ace81193671c585a7cb97f3522 198 Gene3D G3DSA:3.40.50.1240 4 198 6.8E-59 T 15-10-2018 IPR029033 Histidine phosphatase superfamily Trad_2231 182cbf032851b6fc635ee554c09d5630 509 Gene3D G3DSA:2.130.10.10 36 227 2.5E-14 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Trad_2231 182cbf032851b6fc635ee554c09d5630 509 Gene3D G3DSA:2.130.10.10 228 352 2.9E-9 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Trad_2231 182cbf032851b6fc635ee554c09d5630 509 SUPERFAMILY SSF82171 57 353 1.08E-26 T 15-10-2018 Trad_0799 e3d35f91e33135300f1514fb8d48e480 186 SUPERFAMILY SSF53335 6 176 2.11E-27 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Trad_0799 e3d35f91e33135300f1514fb8d48e480 186 Gene3D G3DSA:3.40.50.150 12 182 7.0E-29 T 15-10-2018 Trad_0799 e3d35f91e33135300f1514fb8d48e480 186 Pfam PF08241 Methyltransferase domain 45 129 4.3E-18 T 15-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 Trad_2127 1a126d894419ecb9b257c11c65b30c49 361 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 2 338 3.3E-119 T 15-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 Trad_2127 1a126d894419ecb9b257c11c65b30c49 361 Gene3D G3DSA:3.40.50.300 99 353 5.5E-82 T 15-10-2018 Trad_2127 1a126d894419ecb9b257c11c65b30c49 361 Gene3D G3DSA:3.30.450.90 1 95 3.6E-31 T 15-10-2018 Trad_2127 1a126d894419ecb9b257c11c65b30c49 361 Pfam PF00437 Type II/IV secretion system protein 59 241 2.3E-39 T 15-10-2018 IPR001482 Type II/IV secretion system protein Trad_2127 1a126d894419ecb9b257c11c65b30c49 361 SMART SM00382 118 244 0.0082 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_2127 1a126d894419ecb9b257c11c65b30c49 361 SUPERFAMILY SSF52540 2 328 3.6E-58 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_1021 3f83d70fbaba406f0deb700e225be5f5 431 SUPERFAMILY SSF46626 299 408 1.41E-23 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Trad_1021 3f83d70fbaba406f0deb700e225be5f5 431 Pfam PF00034 Cytochrome c 299 387 2.9E-11 T 15-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Trad_1021 3f83d70fbaba406f0deb700e225be5f5 431 Gene3D G3DSA:1.10.760.10 298 428 4.7E-42 T 15-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Trad_0345 36b736086dc0236aff042c09e9aebfad 269 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Trad_0345 36b736086dc0236aff042c09e9aebfad 269 Pfam PF00005 ABC transporter 21 167 9.7E-32 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Trad_0345 36b736086dc0236aff042c09e9aebfad 269 SMART SM00382 28 217 3.1E-20 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_0345 36b736086dc0236aff042c09e9aebfad 269 SUPERFAMILY SSF52540 3 231 1.57E-59 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_0345 36b736086dc0236aff042c09e9aebfad 269 Gene3D G3DSA:3.40.50.300 1 255 6.4E-68 T 15-10-2018 Trad_1719 0b94480d797f121f9859678b884e04e5 305 Gene3D G3DSA:1.10.3720.10 83 298 1.0E-24 T 15-10-2018 IPR035906 MetI-like superfamily Trad_1719 0b94480d797f121f9859678b884e04e5 305 SUPERFAMILY SSF161098 90 291 4.41E-20 T 15-10-2018 IPR035906 MetI-like superfamily Trad_1719 0b94480d797f121f9859678b884e04e5 305 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 304 3.3E-45 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Trad_2361 1fd8669021d3debed654ff5fe655ad33 262 Pfam PF00005 ABC transporter 20 181 2.0E-28 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Trad_2361 1fd8669021d3debed654ff5fe655ad33 262 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 231 252 8.8E-8 T 15-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal Trad_2361 1fd8669021d3debed654ff5fe655ad33 262 SMART SM00382 29 230 7.9E-10 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_2361 1fd8669021d3debed654ff5fe655ad33 262 SUPERFAMILY SSF52540 5 253 8.14E-60 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_2361 1fd8669021d3debed654ff5fe655ad33 262 Gene3D G3DSA:3.40.50.300 4 254 1.9E-57 T 15-10-2018 Trad_2431 7812d9b4fc93c6742963e782779fcc74 227 SUPERFAMILY SSF56784 4 223 4.2E-31 T 15-10-2018 IPR036412 HAD-like superfamily Trad_2431 7812d9b4fc93c6742963e782779fcc74 227 Gene3D G3DSA:1.10.150.520 16 90 3.0E-32 T 15-10-2018 Trad_2431 7812d9b4fc93c6742963e782779fcc74 227 Pfam PF13419 Haloacid dehalogenase-like hydrolase 5 190 7.4E-20 T 15-10-2018 Trad_2431 7812d9b4fc93c6742963e782779fcc74 227 Gene3D G3DSA:3.40.50.1000 5 217 3.0E-32 T 15-10-2018 IPR023214 HAD superfamily Trad_0827 2dad05bdf764e13ea7b5216b5965a5c1 289 Gene3D G3DSA:3.10.620.30 75 264 8.7E-47 T 15-10-2018 Trad_0827 2dad05bdf764e13ea7b5216b5965a5c1 289 SMART SM00460 165 234 6.7E-22 T 15-10-2018 IPR002931 Transglutaminase-like Trad_0827 2dad05bdf764e13ea7b5216b5965a5c1 289 Pfam PF01841 Transglutaminase-like superfamily 137 232 3.4E-25 T 15-10-2018 IPR002931 Transglutaminase-like Trad_0827 2dad05bdf764e13ea7b5216b5965a5c1 289 SUPERFAMILY SSF54001 7 260 1.54E-44 T 15-10-2018 IPR038765 Papain-like cysteine peptidase superfamily Trad_0827 2dad05bdf764e13ea7b5216b5965a5c1 289 Pfam PF08379 Bacterial transglutaminase-like N-terminal region 3 80 1.4E-19 T 15-10-2018 IPR013589 Bacterial transglutaminase-like, N-terminal Trad_0368 80f81e6ebbd7aba246a80cd9b6c19f2c 130 SUPERFAMILY SSF54211 4 128 3.54E-19 T 15-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Trad_0368 80f81e6ebbd7aba246a80cd9b6c19f2c 130 Pfam PF00825 Ribonuclease P 1 126 1.9E-20 T 15-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 Trad_0368 80f81e6ebbd7aba246a80cd9b6c19f2c 130 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 59 73 - T 15-10-2018 IPR020539 Ribonuclease P, conserved site GO:0004526 Trad_0368 80f81e6ebbd7aba246a80cd9b6c19f2c 130 Gene3D G3DSA:3.30.230.10 1 130 1.3E-19 T 15-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Trad_0368 80f81e6ebbd7aba246a80cd9b6c19f2c 130 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 1 130 14.387 T 15-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 Trad_0368 80f81e6ebbd7aba246a80cd9b6c19f2c 130 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 7 116 3.0E-4 T 15-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 Trad_0368 80f81e6ebbd7aba246a80cd9b6c19f2c 130 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 47 127 3.5E-12 T 15-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 Trad_1797 f89655516cf917d6426cb9c08245552e 125 PIRSF PIRSF002030 1 120 3.7E-32 T 15-10-2018 IPR016339 Truncated hemoglobin, group 1 Trad_1797 f89655516cf917d6426cb9c08245552e 125 Pfam PF01152 Bacterial-like globin 5 113 1.4E-19 T 15-10-2018 IPR001486 Truncated hemoglobin GO:0019825 Trad_1797 f89655516cf917d6426cb9c08245552e 125 SUPERFAMILY SSF46458 5 119 8.81E-31 T 15-10-2018 IPR009050 Globin-like superfamily Trad_1797 f89655516cf917d6426cb9c08245552e 125 Gene3D G3DSA:1.10.490.10 1 123 6.6E-36 T 15-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 Trad_2720 1760b4d460f47b0985239b482c68d714 463 Gene3D G3DSA:1.20.1250.20 5 214 9.0E-14 T 15-10-2018 Trad_2720 1760b4d460f47b0985239b482c68d714 463 SUPERFAMILY SSF103473 4 449 5.84E-31 T 15-10-2018 IPR036259 MFS transporter superfamily Trad_2720 1760b4d460f47b0985239b482c68d714 463 Pfam PF13347 MFS/sugar transport protein 12 446 1.1E-79 T 15-10-2018 Trad_2720 1760b4d460f47b0985239b482c68d714 463 Gene3D G3DSA:1.20.1250.20 237 450 4.8E-14 T 15-10-2018 Trad_0157 07f864db4fa5f80242f372d2bda92d2c 334 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 126 332 1.5E-33 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Trad_0157 07f864db4fa5f80242f372d2bda92d2c 334 Gene3D G3DSA:1.10.3720.10 98 327 2.9E-10 T 15-10-2018 IPR035906 MetI-like superfamily Trad_0157 07f864db4fa5f80242f372d2bda92d2c 334 SUPERFAMILY SSF161098 104 315 1.31E-8 T 15-10-2018 IPR035906 MetI-like superfamily Trad_1907 8b5e50a8610560db14024cff888d56da 266 TIGRFAM TIGR01097 PhnE: phosphonate ABC transporter, permease protein PhnE 22 265 3.8E-81 T 15-10-2018 IPR005769 ABC transporter, permease PhnE/PtxC GO:0005887|GO:0015604|GO:0015716 Trad_1907 8b5e50a8610560db14024cff888d56da 266 SUPERFAMILY SSF161098 71 256 2.09E-34 T 15-10-2018 IPR035906 MetI-like superfamily Trad_1907 8b5e50a8610560db14024cff888d56da 266 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 95 260 6.9E-16 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Trad_1907 8b5e50a8610560db14024cff888d56da 266 Gene3D G3DSA:1.10.3720.10 64 266 2.1E-33 T 15-10-2018 IPR035906 MetI-like superfamily Trad_1046 11315188dad071cb5924a7cc254475fe 64 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 15-10-2018 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Trad_1046 11315188dad071cb5924a7cc254475fe 64 Gene3D G3DSA:1.10.287.310 1 63 2.9E-23 T 15-10-2018 Trad_1046 11315188dad071cb5924a7cc254475fe 64 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 6.8E-21 T 15-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Trad_1046 11315188dad071cb5924a7cc254475fe 64 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 16.087 T 15-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Trad_1046 11315188dad071cb5924a7cc254475fe 64 SUPERFAMILY SSF46561 1 60 1.83E-18 T 15-10-2018 IPR036049 Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Trad_1046 11315188dad071cb5924a7cc254475fe 64 Pfam PF00831 Ribosomal L29 protein 4 60 1.6E-19 T 15-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Trad_2016 5994f553501b4197a548d92130579b47 234 Pfam PF01813 ATP synthase subunit D 11 201 1.9E-48 T 15-10-2018 IPR002699 ATPase, V1 complex, subunit D GO:0042626 Reactome: R-HSA-1222556|Reactome: R-HSA-6798695|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 Trad_2016 5994f553501b4197a548d92130579b47 234 TIGRFAM TIGR00309 V_ATPase_subD: V-type ATPase, D subunit 3 204 9.8E-42 T 15-10-2018 IPR002699 ATPase, V1 complex, subunit D GO:0042626 Reactome: R-HSA-1222556|Reactome: R-HSA-6798695|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 Trad_2016 5994f553501b4197a548d92130579b47 234 Hamap MF_00271 V-type ATP synthase subunit D [atpD]. 2 206 22.351 T 15-10-2018 IPR002699 ATPase, V1 complex, subunit D GO:0042626 Reactome: R-HSA-1222556|Reactome: R-HSA-6798695|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 Trad_2246 ab3399a1116730636252f32e1390fb42 105 Gene3D G3DSA:3.30.110.70 1 102 8.6E-16 T 15-10-2018 Trad_2246 ab3399a1116730636252f32e1390fb42 105 Pfam PF01906 Putative heavy-metal-binding 2 94 7.0E-17 T 15-10-2018 IPR002765 Uncharacterised protein family UPF0145 Trad_2246 ab3399a1116730636252f32e1390fb42 105 SUPERFAMILY SSF117782 2 95 1.83E-16 T 15-10-2018 IPR035439 UPF0145 domain superfamily Trad_2573 f0c699f06f62ad919cf075c0225ad8c8 157 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 13 149 4.2E-52 T 15-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Trad_2573 f0c699f06f62ad919cf075c0225ad8c8 157 SUPERFAMILY SSF52121 4 153 1.44E-59 T 15-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Trad_2573 f0c699f06f62ad919cf075c0225ad8c8 157 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 12 151 3.3E-55 T 15-10-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Trad_2573 f0c699f06f62ad919cf075c0225ad8c8 157 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 8 153 31.122 T 15-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Trad_2573 f0c699f06f62ad919cf075c0225ad8c8 157 Gene3D G3DSA:3.40.50.960 1 154 4.3E-60 T 15-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Trad_1916 9fa5a18dd63d5e7f3b42edfa4fdb36c3 125 SUPERFAMILY SSF46785 25 123 6.69E-29 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Trad_1916 9fa5a18dd63d5e7f3b42edfa4fdb36c3 125 Pfam PF01638 HxlR-like helix-turn-helix 37 124 4.0E-23 T 15-10-2018 IPR002577 Helix-turn-helix, HxlR type Trad_1916 9fa5a18dd63d5e7f3b42edfa4fdb36c3 125 Gene3D G3DSA:1.10.10.10 24 125 3.3E-35 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Trad_0309 39590eec157c64df0aaf838845364948 256 Gene3D G3DSA:2.20.25.570 140 212 3.9E-55 T 15-10-2018 Trad_0309 39590eec157c64df0aaf838845364948 256 SUPERFAMILY SSF53335 3 246 2.94E-34 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Trad_0309 39590eec157c64df0aaf838845364948 256 Pfam PF13649 Methyltransferase domain 35 132 1.0E-13 T 15-10-2018 Trad_0309 39590eec157c64df0aaf838845364948 256 Gene3D G3DSA:3.40.50.150 32 245 3.9E-55 T 15-10-2018 Trad_0037 8102bb1a65c48cf7d3a20d61e850f725 966 Pfam PF00395 S-layer homology domain 21 64 2.1E-9 T 15-10-2018 IPR001119 S-layer homology domain Trad_1635 fd8832e43c361eae84587f31ef9e8815 457 PIRSF PIRSF006603 2 452 5.3E-91 T 15-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Trad_1635 fd8832e43c361eae84587f31ef9e8815 457 Pfam PF01554 MatE 19 180 6.6E-24 T 15-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Trad_1635 fd8832e43c361eae84587f31ef9e8815 457 Pfam PF01554 MatE 246 407 3.3E-26 T 15-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Trad_1635 fd8832e43c361eae84587f31ef9e8815 457 TIGRFAM TIGR00797 matE: MATE efflux family protein 19 420 5.9E-80 T 15-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Trad_1064 628d57a5c74e7e6b937c3fb0b1a91cfb 131 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 131 31.427 T 15-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 Trad_1064 628d57a5c74e7e6b937c3fb0b1a91cfb 131 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 12 128 2.5E-53 T 15-10-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Trad_1064 628d57a5c74e7e6b937c3fb0b1a91cfb 131 Pfam PF00411 Ribosomal protein S11 21 130 1.8E-41 T 15-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 Trad_1064 628d57a5c74e7e6b937c3fb0b1a91cfb 131 Gene3D G3DSA:3.30.420.80 5 131 3.2E-51 T 15-10-2018 IPR036967 Ribosomal protein S11 superfamily GO:0003735|GO:0005840|GO:0006412 Trad_1064 628d57a5c74e7e6b937c3fb0b1a91cfb 131 SUPERFAMILY SSF53137 16 131 1.31E-43 T 15-10-2018 Trad_1064 628d57a5c74e7e6b937c3fb0b1a91cfb 131 PIRSF PIRSF002131 1 131 1.3E-47 T 15-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 Trad_1064 628d57a5c74e7e6b937c3fb0b1a91cfb 131 ProSitePatterns PS00054 Ribosomal protein S11 signature. 99 121 - T 15-10-2018 IPR018102 Ribosomal S11, conserved site Trad_2707 a1069dd5027c07346e42931550faf631 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 1.1E-14 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2707 a1069dd5027c07346e42931550faf631 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 1.1E-14 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2707 a1069dd5027c07346e42931550faf631 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 1.1E-14 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2707 a1069dd5027c07346e42931550faf631 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 1.1E-14 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2707 a1069dd5027c07346e42931550faf631 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 1.1E-14 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2707 a1069dd5027c07346e42931550faf631 244 SUPERFAMILY SSF51735 3 241 4.97E-49 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_2707 a1069dd5027c07346e42931550faf631 244 Pfam PF00106 short chain dehydrogenase 4 193 1.8E-38 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2707 a1069dd5027c07346e42931550faf631 244 Gene3D G3DSA:3.40.50.720 4 238 5.7E-48 T 15-10-2018 Trad_2707 a1069dd5027c07346e42931550faf631 244 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 137 165 - T 15-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Trad_2878 e26d7a2303f23a09cd9169fe4db4419b 368 Gene3D G3DSA:1.10.3720.10 167 361 4.2E-28 T 15-10-2018 IPR035906 MetI-like superfamily Trad_2878 e26d7a2303f23a09cd9169fe4db4419b 368 Gene3D G3DSA:1.10.3720.10 2 166 4.5E-25 T 15-10-2018 IPR035906 MetI-like superfamily Trad_2878 e26d7a2303f23a09cd9169fe4db4419b 368 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 84 363 2.3E-8 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Trad_2878 e26d7a2303f23a09cd9169fe4db4419b 368 SUPERFAMILY SSF161098 11 153 2.13E-20 T 15-10-2018 IPR035906 MetI-like superfamily Trad_2878 e26d7a2303f23a09cd9169fe4db4419b 368 SUPERFAMILY SSF161098 179 358 1.02E-29 T 15-10-2018 IPR035906 MetI-like superfamily Trad_0151 c0d76a3f8803950924d483f97f5aac77 378 SUPERFAMILY SSF51556 56 352 6.47E-58 T 15-10-2018 IPR032466 Metal-dependent hydrolase Trad_0151 c0d76a3f8803950924d483f97f5aac77 378 Gene3D G3DSA:3.20.20.140 11 356 7.0E-111 T 15-10-2018 Trad_0151 c0d76a3f8803950924d483f97f5aac77 378 Pfam PF01979 Amidohydrolase family 59 353 7.1E-21 T 15-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Trad_0151 c0d76a3f8803950924d483f97f5aac77 378 Gene3D G3DSA:2.30.40.10 2 370 7.0E-111 T 15-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Trad_0151 c0d76a3f8803950924d483f97f5aac77 378 SUPERFAMILY SSF51338 3 70 3.24E-14 T 15-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Trad_1912 00d78d58aed672f64ba0014bffc49476 269 SUPERFAMILY SSF161098 74 258 2.09E-30 T 15-10-2018 IPR035906 MetI-like superfamily Trad_1912 00d78d58aed672f64ba0014bffc49476 269 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 90 267 6.5E-12 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Trad_1912 00d78d58aed672f64ba0014bffc49476 269 Gene3D G3DSA:1.10.3720.10 67 269 1.8E-27 T 15-10-2018 IPR035906 MetI-like superfamily Trad_1912 00d78d58aed672f64ba0014bffc49476 269 TIGRFAM TIGR01097 PhnE: phosphonate ABC transporter, permease protein PhnE 25 268 2.4E-79 T 15-10-2018 IPR005769 ABC transporter, permease PhnE/PtxC GO:0005887|GO:0015604|GO:0015716 Trad_1438 8e08431c6ff62ef1a7c42e6474afc9c0 666 Gene3D G3DSA:2.60.120.260 318 447 1.1E-10 T 15-10-2018 IPR008979 Galactose-binding-like domain superfamily Trad_1438 8e08431c6ff62ef1a7c42e6474afc9c0 666 Pfam PF03170 Bacterial cellulose synthase subunit 61 518 8.5E-13 T 15-10-2018 IPR018513 Cellulose synthase BcsB, bacterial GO:0006011|GO:0016020 Trad_2678 c67345ab13434771ed913770397fe250 137 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 5 110 4.7E-25 T 15-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like Trad_1229 df75e088f3e506185469009057f0e374 311 Pfam PF01261 Xylose isomerase-like TIM barrel 31 264 5.7E-18 T 15-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain Trad_1229 df75e088f3e506185469009057f0e374 311 Gene3D G3DSA:3.20.20.150 1 309 7.3E-61 T 15-10-2018 Trad_1229 df75e088f3e506185469009057f0e374 311 SUPERFAMILY SSF51658 4 308 6.5E-41 T 15-10-2018 IPR036237 Xylose isomerase-like superfamily Trad_1070 60c72635ef63255caebc16e582e8eed8 267 Gene3D G3DSA:3.40.50.300 30 260 9.2E-69 T 15-10-2018 Trad_1070 60c72635ef63255caebc16e582e8eed8 267 SMART SM00382 61 248 7.0E-14 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_1070 60c72635ef63255caebc16e582e8eed8 267 SUPERFAMILY SSF52540 32 253 1.3E-71 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_1070 60c72635ef63255caebc16e582e8eed8 267 Pfam PF00005 ABC transporter 52 200 1.6E-31 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Trad_1727 50b03f0f38bbc513de92ec8eb2ead134 326 ProSitePatterns PS00356 LacI-type HTH domain signature. 1 19 - T 15-10-2018 Trad_1727 50b03f0f38bbc513de92ec8eb2ead134 326 SUPERFAMILY SSF53822 58 323 6.89E-59 T 15-10-2018 IPR028082 Periplasmic binding protein-like I Trad_1727 50b03f0f38bbc513de92ec8eb2ead134 326 Pfam PF00356 Bacterial regulatory proteins, lacI family 1 44 1.3E-19 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Trad_1727 50b03f0f38bbc513de92ec8eb2ead134 326 SMART SM00354 1 68 5.2E-29 T 15-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Trad_1727 50b03f0f38bbc513de92ec8eb2ead134 326 Pfam PF13377 Periplasmic binding protein-like domain 167 321 6.0E-31 T 15-10-2018 Trad_1727 50b03f0f38bbc513de92ec8eb2ead134 326 Gene3D G3DSA:1.10.260.40 1 52 3.8E-22 T 15-10-2018 Trad_1727 50b03f0f38bbc513de92ec8eb2ead134 326 Gene3D G3DSA:3.40.50.2300 53 300 3.7E-66 T 15-10-2018 Trad_1727 50b03f0f38bbc513de92ec8eb2ead134 326 SUPERFAMILY SSF47413 1 56 5.63E-17 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Trad_1727 50b03f0f38bbc513de92ec8eb2ead134 326 Gene3D G3DSA:3.40.50.2300 157 284 3.7E-66 T 15-10-2018 Trad_1897 dc88387ae4af5aff8150986daf80a0bf 146 SUPERFAMILY SSF54637 3 139 1.02E-33 T 15-10-2018 IPR029069 HotDog domain superfamily Trad_1897 dc88387ae4af5aff8150986daf80a0bf 146 PIRSF PIRSF014972 1 140 5.0E-34 T 15-10-2018 IPR025540 Fluoroacetyl-CoA thioesterase Trad_1897 dc88387ae4af5aff8150986daf80a0bf 146 Gene3D G3DSA:3.10.129.10 2 145 1.2E-35 T 15-10-2018 Trad_0521 977f770f782678d934f142034d6c2924 369 SUPERFAMILY SSF55729 178 351 3.5E-22 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase Trad_0521 977f770f782678d934f142034d6c2924 369 Gene3D G3DSA:3.40.630.30 163 336 1.4E-13 T 15-10-2018 Trad_0521 977f770f782678d934f142034d6c2924 369 Pfam PF13480 Acetyltransferase (GNAT) domain 177 320 1.6E-10 T 15-10-2018 IPR038740 BioF2-like, acetyltransferase domain KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 Trad_2629 d7f6ff2bef03828221670a8b7a790160 378 Hamap MF_01609 Glutamate--cysteine ligase [gshA]. 1 378 83.205 T 15-10-2018 IPR011793 Putative glutamate--cysteine ligase YbdK GO:0016879 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 Trad_2629 d7f6ff2bef03828221670a8b7a790160 378 Pfam PF04107 Glutamate-cysteine ligase family 2(GCS2) 10 290 3.6E-56 T 15-10-2018 IPR006336 Glutamate--cysteine ligase, GCS2 GO:0004357|GO:0042398 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 Trad_2629 d7f6ff2bef03828221670a8b7a790160 378 Gene3D G3DSA:3.30.590.20 3 368 4.4E-104 T 15-10-2018 Trad_2629 d7f6ff2bef03828221670a8b7a790160 378 TIGRFAM TIGR02050 gshA_cyan_rel: carboxylate-amine ligase, YbdK family 9 295 4.1E-87 T 15-10-2018 IPR011793 Putative glutamate--cysteine ligase YbdK GO:0016879 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 Trad_2629 d7f6ff2bef03828221670a8b7a790160 378 SUPERFAMILY SSF55931 5 366 8.53E-101 T 15-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Trad_2837 ab12c7e2b2c2fcee3966b90782ccb0a4 282 Pfam PF00665 Integrase core domain 153 266 4.8E-14 T 15-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Trad_2837 ab12c7e2b2c2fcee3966b90782ccb0a4 282 Gene3D G3DSA:3.30.420.10 145 278 4.5E-5 T 15-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Trad_2837 ab12c7e2b2c2fcee3966b90782ccb0a4 282 SUPERFAMILY SSF53098 152 275 1.49E-21 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily Trad_2536 b06a1672ad2c125ecb304f14a5b6646c 172 SUPERFAMILY SSF55387 44 167 1.31E-38 T 15-10-2018 Trad_2536 b06a1672ad2c125ecb304f14a5b6646c 172 Gene3D G3DSA:3.30.920.80 41 169 7.3E-62 T 15-10-2018 IPR038458 NADH-quinone oxidoreductase, subunit 15 superfamily KEGG: 00190+1.6.5.11 Trad_2536 b06a1672ad2c125ecb304f14a5b6646c 172 Pfam PF11497 NADH-quinone oxidoreductase chain 15 44 166 6.5E-55 T 15-10-2018 IPR021093 NADH-quinone oxidoreductase, subunit15 KEGG: 00190+1.6.5.11 Trad_2437 bed9f82738ab1ebc664c6c26b1884a2a 387 Pfam PF00999 Sodium/hydrogen exchanger family 11 362 4.4E-27 T 15-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 Trad_2437 bed9f82738ab1ebc664c6c26b1884a2a 387 Gene3D G3DSA:1.20.1530.20 4 374 2.7E-49 T 15-10-2018 IPR038770 Sodium/solute symporter superfamily Trad_1185 234fdbd66340f305f9d0351b4df502d8 320 Pfam PF04018 Domain of unknown function (DUF368) 41 276 2.0E-81 T 15-10-2018 IPR007163 Protein of unknown function DUF368 Trad_0285 e4dcd6d6075d6377714586bd6dd9bbba 379 Gene3D G3DSA:3.90.245.10 52 269 3.2E-30 T 15-10-2018 IPR036452 Ribonucleoside hydrolase-like Trad_0285 e4dcd6d6075d6377714586bd6dd9bbba 379 SUPERFAMILY SSF53590 62 328 1.06E-19 T 15-10-2018 IPR036452 Ribonucleoside hydrolase-like Trad_0285 e4dcd6d6075d6377714586bd6dd9bbba 379 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 63 229 4.9E-11 T 15-10-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain Trad_2649 e2d5bb0ab3e28eee9cd61523cca0692f 205 Pfam PF01613 Flavin reductase like domain 26 169 4.7E-22 T 15-10-2018 IPR002563 Flavin reductase like domain GO:0010181 Trad_2649 e2d5bb0ab3e28eee9cd61523cca0692f 205 Gene3D G3DSA:2.30.110.10 5 205 5.8E-70 T 15-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Trad_2649 e2d5bb0ab3e28eee9cd61523cca0692f 205 SMART SM00903 23 178 6.6E-21 T 15-10-2018 IPR002563 Flavin reductase like domain GO:0010181 Trad_2649 e2d5bb0ab3e28eee9cd61523cca0692f 205 SUPERFAMILY SSF50475 5 200 2.01E-47 T 15-10-2018 Trad_0752 57c8a37ee6e232801e1f7d1f3b394b1e 745 Pfam PF12704 MacB-like periplasmic core domain 8 213 3.6E-12 T 15-10-2018 IPR025857 MacB-like periplasmic core domain Trad_0752 57c8a37ee6e232801e1f7d1f3b394b1e 745 Pfam PF12704 MacB-like periplasmic core domain 382 575 1.4E-7 T 15-10-2018 IPR025857 MacB-like periplasmic core domain Trad_1999 5f811af29662b3c07a02ae50c8d007d1 336 SUPERFAMILY SSF52374 20 293 7.1E-88 T 15-10-2018 Trad_1999 5f811af29662b3c07a02ae50c8d007d1 336 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 25 36 - T 15-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Trad_1999 5f811af29662b3c07a02ae50c8d007d1 336 Gene3D G3DSA:3.40.50.620 10 336 1.5E-99 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Trad_1999 5f811af29662b3c07a02ae50c8d007d1 336 PRINTS PR00987 Glutamyl-tRNA synthetase signature 22 34 2.0E-17 T 15-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Trad_1999 5f811af29662b3c07a02ae50c8d007d1 336 PRINTS PR00987 Glutamyl-tRNA synthetase signature 36 47 2.0E-17 T 15-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Trad_1999 5f811af29662b3c07a02ae50c8d007d1 336 PRINTS PR00987 Glutamyl-tRNA synthetase signature 222 230 2.0E-17 T 15-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Trad_1999 5f811af29662b3c07a02ae50c8d007d1 336 PRINTS PR00987 Glutamyl-tRNA synthetase signature 206 216 2.0E-17 T 15-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Trad_1999 5f811af29662b3c07a02ae50c8d007d1 336 PRINTS PR00987 Glutamyl-tRNA synthetase signature 51 64 2.0E-17 T 15-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Trad_1999 5f811af29662b3c07a02ae50c8d007d1 336 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 21 316 7.2E-58 T 15-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 Trad_1300 a71eb9a85c305680e9cb86294f8b2f48 164 Gene3D G3DSA:2.170.150.40 18 128 8.2E-40 T 15-10-2018 Trad_1300 a71eb9a85c305680e9cb86294f8b2f48 164 Pfam PF04248 Domain of unknown function (DUF427) 32 122 1.2E-35 T 15-10-2018 IPR007361 Domain of unknown function DUF427 Trad_1157 893829e5ff141527db84939e0ca09571 360 Pfam PF01032 FecCD transport family 30 351 8.5E-94 T 15-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 Trad_1157 893829e5ff141527db84939e0ca09571 360 SUPERFAMILY SSF81345 15 351 1.24E-84 T 15-10-2018 IPR037294 ABC transporter, BtuC-like Trad_1157 893829e5ff141527db84939e0ca09571 360 Gene3D G3DSA:1.10.3470.10 19 357 6.4E-109 T 15-10-2018 IPR037294 ABC transporter, BtuC-like Trad_1320 09df6f9a6f34e1dc6769849f97dba550 204 Gene3D G3DSA:2.30.110.10 14 191 1.5E-50 T 15-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Trad_1320 09df6f9a6f34e1dc6769849f97dba550 204 Pfam PF01613 Flavin reductase like domain 25 176 6.3E-28 T 15-10-2018 IPR002563 Flavin reductase like domain GO:0010181 Trad_1320 09df6f9a6f34e1dc6769849f97dba550 204 SMART SM00903 23 164 1.3E-25 T 15-10-2018 IPR002563 Flavin reductase like domain GO:0010181 Trad_1320 09df6f9a6f34e1dc6769849f97dba550 204 SUPERFAMILY SSF50475 22 185 2.11E-41 T 15-10-2018 Trad_0948 3e88d6bfd32b191b765a5a9732c541bc 421 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 203 415 6.5E-18 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Trad_0948 3e88d6bfd32b191b765a5a9732c541bc 421 SUPERFAMILY SSF161098 16 417 6.46E-51 T 15-10-2018 IPR035906 MetI-like superfamily Trad_0948 3e88d6bfd32b191b765a5a9732c541bc 421 Gene3D G3DSA:1.10.3720.10 170 419 1.2E-58 T 15-10-2018 IPR035906 MetI-like superfamily Trad_1386 f1c0364befa73705ae14ecc0094910f5 238 TIGRFAM TIGR03605 antibiot_sagB: SagB-type dehydrogenase domain 81 238 6.0E-25 T 15-10-2018 IPR020051 SagB-type dehydrogenase domain Trad_1386 f1c0364befa73705ae14ecc0094910f5 238 SUPERFAMILY SSF55469 157 238 5.14E-12 T 15-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Trad_1386 f1c0364befa73705ae14ecc0094910f5 238 Pfam PF00881 Nitroreductase family 81 237 6.1E-12 T 15-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 Trad_1386 f1c0364befa73705ae14ecc0094910f5 238 Gene3D G3DSA:3.40.109.10 31 238 7.5E-43 T 15-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Trad_2294 3199014cd607012fb91e01eec6b4e818 323 Pfam PF02653 Branched-chain amino acid transport system / permease component 47 312 8.4E-49 T 15-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Trad_2401 cc6c32e9cfc24a3e93cbf221332c5499 401 Gene3D G3DSA:2.120.10.30 44 318 5.9E-9 T 15-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like Trad_2401 cc6c32e9cfc24a3e93cbf221332c5499 401 SUPERFAMILY SSF101898 39 261 2.49E-15 T 15-10-2018 Trad_0693 16b8668e597d8d34e4802b5db978a1f6 334 SUPERFAMILY SSF51658 8 317 4.84E-57 T 15-10-2018 IPR036237 Xylose isomerase-like superfamily Trad_0693 16b8668e597d8d34e4802b5db978a1f6 334 Gene3D G3DSA:3.20.20.150 1 323 3.6E-94 T 15-10-2018 Trad_0693 16b8668e597d8d34e4802b5db978a1f6 334 Pfam PF07582 AP endonuclease family 2 C terminus 275 329 1.8E-21 T 15-10-2018 IPR011418 AP endonuclease, family 2, C-terminal Trad_0693 16b8668e597d8d34e4802b5db978a1f6 334 Pfam PF01261 Xylose isomerase-like TIM barrel 23 274 2.9E-34 T 15-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain Trad_0971 6017cc90e1c33a82ed77f7e51d38374f 390 Gene3D G3DSA:3.40.50.2300 26 345 6.1E-84 T 15-10-2018 Trad_0971 6017cc90e1c33a82ed77f7e51d38374f 390 Pfam PF13458 Periplasmic binding protein 24 357 8.3E-57 T 15-10-2018 IPR028081 Leucine-binding protein domain Trad_0971 6017cc90e1c33a82ed77f7e51d38374f 390 SUPERFAMILY SSF53822 23 355 4.35E-77 T 15-10-2018 IPR028082 Periplasmic binding protein-like I Trad_0971 6017cc90e1c33a82ed77f7e51d38374f 390 Gene3D G3DSA:3.40.50.2300 139 270 6.1E-84 T 15-10-2018 Trad_1333 e6f9a7ea77e5a817d27229a8bb4e89b7 226 Gene3D G3DSA:3.30.70.2830 95 208 5.1E-11 T 15-10-2018 Trad_0392 d907677e2f52002d6b7acf6ef9b9d224 140 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 13 132 5.2E-44 T 15-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 Trad_0392 d907677e2f52002d6b7acf6ef9b9d224 140 SUPERFAMILY SSF51316 13 133 1.41E-52 T 15-10-2018 IPR011057 Mss4-like superfamily Trad_0392 d907677e2f52002d6b7acf6ef9b9d224 140 Gene3D G3DSA:2.170.150.20 6 139 3.7E-50 T 15-10-2018 Trad_0392 d907677e2f52002d6b7acf6ef9b9d224 140 Pfam PF01641 SelR domain 15 130 3.3E-45 T 15-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 Trad_2344 cdc7749c1e5775ea84b8a3fbbc387ba4 405 Pfam PF12679 ABC-2 family transporter protein 7 399 5.5E-23 T 15-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 Trad_1699 c696500809caadca52f6a79292b6c188 605 Hamap MF_01518 Adenine deaminase [ade]. 31 597 31.073 T 15-10-2018 IPR006679 Adenine deaminase GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 Trad_1699 c696500809caadca52f6a79292b6c188 605 Pfam PF01979 Amidohydrolase family 85 372 1.5E-12 T 15-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Trad_1699 c696500809caadca52f6a79292b6c188 605 SUPERFAMILY SSF51338 27 381 4.54E-11 T 15-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Trad_1699 c696500809caadca52f6a79292b6c188 605 SUPERFAMILY SSF51556 89 339 1.71E-16 T 15-10-2018 IPR032466 Metal-dependent hydrolase Trad_1699 c696500809caadca52f6a79292b6c188 605 Pfam PF13382 Adenine deaminase C-terminal domain 433 590 1.5E-51 T 15-10-2018 IPR026912 Adenine deaminase C-terminal domain KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 Trad_1699 c696500809caadca52f6a79292b6c188 605 Gene3D G3DSA:2.30.40.10 23 372 5.3E-86 T 15-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Trad_1699 c696500809caadca52f6a79292b6c188 605 Gene3D G3DSA:3.20.20.140 89 337 5.3E-86 T 15-10-2018 Trad_1925 dd0553b6c383a22116b6b48bb9f605b1 355 Pfam PF02618 YceG-like family 58 349 2.4E-65 T 15-10-2018 IPR003770 Endolytic murein transglycosylase Trad_1925 dd0553b6c383a22116b6b48bb9f605b1 355 Gene3D G3DSA:1.10.8.1150 52 125 1.4E-10 T 15-10-2018 Trad_1925 dd0553b6c383a22116b6b48bb9f605b1 355 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 25 353 8.7E-50 T 15-10-2018 IPR003770 Endolytic murein transglycosylase Trad_1925 dd0553b6c383a22116b6b48bb9f605b1 355 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 25 354 28.992 T 15-10-2018 IPR003770 Endolytic murein transglycosylase Trad_0936 3cb1ff62e1993961928c2e43c2b1a60d 421 Gene3D G3DSA:2.120.10.30 184 403 4.4E-6 T 15-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like Trad_0936 3cb1ff62e1993961928c2e43c2b1a60d 421 SUPERFAMILY SSF75011 69 390 1.83E-10 T 15-10-2018 Trad_0936 3cb1ff62e1993961928c2e43c2b1a60d 421 Pfam PF06739 Beta-propeller repeat 194 226 2.3E-9 T 15-10-2018 IPR010620 Beta-propeller repeat Trad_0936 3cb1ff62e1993961928c2e43c2b1a60d 421 Pfam PF06739 Beta-propeller repeat 85 117 1.7E-7 T 15-10-2018 IPR010620 Beta-propeller repeat Trad_0677 00967f70049ef3c6595fa31c3a11b0a2 102 Pfam PF14542 GCN5-related N-acetyl-transferase 16 89 6.7E-25 T 15-10-2018 IPR031165 Yjdj-type Gcn5-related N-acetyltransferase Trad_0677 00967f70049ef3c6595fa31c3a11b0a2 102 SUPERFAMILY SSF55729 7 93 1.66E-27 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase Trad_0677 00967f70049ef3c6595fa31c3a11b0a2 102 Gene3D G3DSA:3.40.630.30 2 97 2.7E-28 T 15-10-2018 Trad_1883 376365a2dcacd6b82a5705eb12b9be01 237 SMART SM00382 26 211 2.5E-9 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_1883 376365a2dcacd6b82a5705eb12b9be01 237 Pfam PF00005 ABC transporter 18 162 1.8E-24 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Trad_1883 376365a2dcacd6b82a5705eb12b9be01 237 Gene3D G3DSA:3.40.50.300 1 235 8.0E-59 T 15-10-2018 Trad_1883 376365a2dcacd6b82a5705eb12b9be01 237 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 213 233 1.1E-4 T 15-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal Trad_1883 376365a2dcacd6b82a5705eb12b9be01 237 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Trad_1883 376365a2dcacd6b82a5705eb12b9be01 237 SUPERFAMILY SSF52540 2 233 4.47E-54 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_1057 d4afba2ee5706ed9989b544b152d7298 164 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 142 3.3E-44 T 15-10-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_1057 d4afba2ee5706ed9989b544b152d7298 164 SUPERFAMILY SSF52080 4 143 8.5E-40 T 15-10-2018 IPR036227 Ribosomal L18e/L15P superfamily Trad_1057 d4afba2ee5706ed9989b544b152d7298 164 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 145 19.604 T 15-10-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 Trad_1057 d4afba2ee5706ed9989b544b152d7298 164 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 27 142 1.2E-29 T 15-10-2018 IPR021131 Ribosomal protein L18e/L15P Trad_1057 d4afba2ee5706ed9989b544b152d7298 164 Gene3D G3DSA:3.100.10.10 68 144 6.5E-19 T 15-10-2018 Trad_2256 1b1285a7ca35de39ac0d079311c9c1c7 261 SMART SM00382 44 223 3.5E-13 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_2256 1b1285a7ca35de39ac0d079311c9c1c7 261 SUPERFAMILY SSF52540 20 242 5.46E-58 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_2256 1b1285a7ca35de39ac0d079311c9c1c7 261 Pfam PF00005 ABC transporter 35 173 4.3E-26 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Trad_2256 1b1285a7ca35de39ac0d079311c9c1c7 261 Gene3D G3DSA:3.40.50.300 12 228 5.6E-57 T 15-10-2018 Trad_2256 1b1285a7ca35de39ac0d079311c9c1c7 261 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Trad_0900 b3121ef9e769b84cd6825b12963bd95a 279 Pfam PF01569 PAP2 superfamily 94 211 2.6E-22 T 15-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase Trad_0900 b3121ef9e769b84cd6825b12963bd95a 279 SUPERFAMILY SSF48317 6 212 2.35E-38 T 15-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily Trad_0900 b3121ef9e769b84cd6825b12963bd95a 279 Gene3D G3DSA:1.20.144.10 123 229 2.6E-22 T 15-10-2018 Trad_0900 b3121ef9e769b84cd6825b12963bd95a 279 SMART SM00014 93 206 5.9E-16 T 15-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase Trad_0211 44462d0b681a6f538cc352951b9f5375 347 SUPERFAMILY SSF52518 16 343 8.42E-98 T 15-10-2018 IPR029061 Thiamin diphosphate-binding fold Trad_0211 44462d0b681a6f538cc352951b9f5375 347 Pfam PF00676 Dehydrogenase E1 component 32 321 5.6E-80 T 15-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 Trad_0211 44462d0b681a6f538cc352951b9f5375 347 Gene3D G3DSA:3.40.50.970 8 346 4.0E-110 T 15-10-2018 Trad_0211 44462d0b681a6f538cc352951b9f5375 347 TIGRFAM TIGR03181 PDH_E1_alph_x: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 16 336 2.7E-128 T 15-10-2018 IPR017596 Pyruvate dehydrogenase E1 component subunit alpha/BCKADH E1-alpha KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 Trad_0805 96da80dc876890d15881af6915499946 182 SUPERFAMILY SSF46894 107 171 4.08E-10 T 15-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Trad_0805 96da80dc876890d15881af6915499946 182 Gene3D G3DSA:1.10.10.10 71 175 2.0E-10 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Trad_0805 96da80dc876890d15881af6915499946 182 SMART SM00421 114 171 8.7E-7 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Trad_0805 96da80dc876890d15881af6915499946 182 Pfam PF00196 Bacterial regulatory proteins, luxR family 116 167 2.0E-7 T 15-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Trad_1751 2d7e5bdd8dc7451dc4e2eb16bc0de11b 292 SUPERFAMILY SSF103481 186 280 1.01E-15 T 15-10-2018 Trad_1751 2d7e5bdd8dc7451dc4e2eb16bc0de11b 292 SUPERFAMILY SSF103481 37 140 1.11E-13 T 15-10-2018 Trad_1751 2d7e5bdd8dc7451dc4e2eb16bc0de11b 292 Pfam PF00892 EamA-like transporter family 150 277 3.0E-22 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Trad_1751 2d7e5bdd8dc7451dc4e2eb16bc0de11b 292 Pfam PF00892 EamA-like transporter family 3 136 2.1E-18 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Trad_0493 23f57c558ca2d1974567147a9649720d 354 SUPERFAMILY SSF51004 1 286 6.54E-12 T 15-10-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily Trad_0493 23f57c558ca2d1974567147a9649720d 354 Gene3D G3DSA:2.130.10.10 184 348 4.1E-5 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Trad_1625 a5c633e71e9574ddf9fa3a0a7671f68b 331 Pfam PF00248 Aldo/keto reductase family 15 310 3.5E-74 T 15-10-2018 IPR023210 NADP-dependent oxidoreductase domain Trad_1625 a5c633e71e9574ddf9fa3a0a7671f68b 331 SUPERFAMILY SSF51430 1 312 2.1E-98 T 15-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Trad_1625 a5c633e71e9574ddf9fa3a0a7671f68b 331 Gene3D G3DSA:3.20.20.100 1 330 1.8E-113 T 15-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Trad_0713 2ecd4c45770709f282976edcb27c9483 123 Gene3D G3DSA:3.30.1300.70 38 118 5.2E-8 T 15-10-2018 Trad_0713 2ecd4c45770709f282976edcb27c9483 123 SUPERFAMILY SSF54523 10 106 5.1E-7 T 15-10-2018 Trad_0183 a6a358928975b6d7ac7aa6b55202d826 324 Gene3D G3DSA:2.60.120.10 236 320 3.2E-8 T 15-10-2018 IPR014710 RmlC-like jelly roll fold Trad_0183 a6a358928975b6d7ac7aa6b55202d826 324 SUPERFAMILY SSF51182 1 321 1.56E-78 T 15-10-2018 IPR011051 RmlC-like cupin domain superfamily Trad_0183 a6a358928975b6d7ac7aa6b55202d826 324 Gene3D G3DSA:2.60.120.10 1 231 3.0E-75 T 15-10-2018 IPR014710 RmlC-like jelly roll fold Trad_0183 a6a358928975b6d7ac7aa6b55202d826 324 Pfam PF01238 Phosphomannose isomerase type I 14 202 1.0E-10 T 15-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 Trad_0183 a6a358928975b6d7ac7aa6b55202d826 324 PIRSF PIRSF036894 3 320 6.6E-84 T 15-10-2018 IPR014628 Mannose-6-phosphate isomerase, Firmicutes type, short form GO:0004476|GO:0005975 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882 Trad_0215 0b0013e326638bf857e8e1e0f54727aa 324 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 101 119 3.7E-6 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 Trad_0215 0b0013e326638bf857e8e1e0f54727aa 324 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 30 50 3.7E-6 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 Trad_0215 0b0013e326638bf857e8e1e0f54727aa 324 Hamap MF_00367 GTPase Era [era]. 25 322 30.986 T 15-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_0215 0b0013e326638bf857e8e1e0f54727aa 324 Gene3D G3DSA:3.40.50.300 24 209 8.7E-40 T 15-10-2018 Trad_0215 0b0013e326638bf857e8e1e0f54727aa 324 SUPERFAMILY SSF54814 206 323 3.97E-32 T 15-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 Trad_0215 0b0013e326638bf857e8e1e0f54727aa 324 TIGRFAM TIGR00436 era: GTP-binding protein Era 28 304 3.0E-60 T 15-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_0215 0b0013e326638bf857e8e1e0f54727aa 324 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 27 164 4.9E-20 T 15-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Trad_0215 0b0013e326638bf857e8e1e0f54727aa 324 SUPERFAMILY SSF52540 30 236 2.2E-35 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_0215 0b0013e326638bf857e8e1e0f54727aa 324 Pfam PF01926 50S ribosome-binding GTPase 30 137 1.2E-19 T 15-10-2018 IPR006073 GTP binding domain GO:0005525 Trad_0215 0b0013e326638bf857e8e1e0f54727aa 324 Pfam PF07650 KH domain 234 311 1.5E-12 T 15-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Trad_0215 0b0013e326638bf857e8e1e0f54727aa 324 Gene3D G3DSA:3.30.300.20 210 324 2.2E-35 T 15-10-2018 IPR015946 K homology domain-like, alpha/beta Trad_1930 35b48a6b4668a5d3fb724ece4facc138 131 Gene3D G3DSA:3.10.129.10 1 131 8.3E-53 T 15-10-2018 Trad_1930 35b48a6b4668a5d3fb724ece4facc138 131 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 12 127 7.1E-38 T 15-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 Trad_1930 35b48a6b4668a5d3fb724ece4facc138 131 SUPERFAMILY SSF54637 10 130 7.86E-32 T 15-10-2018 IPR029069 HotDog domain superfamily Trad_1930 35b48a6b4668a5d3fb724ece4facc138 131 Pfam PF03061 Thioesterase superfamily 42 119 3.5E-15 T 15-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 Trad_1556 863470efbdab44f364c9afb84d1f9f5f 441 Pfam PF00155 Aminotransferase class I and II 94 430 3.1E-61 T 15-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Trad_1556 863470efbdab44f364c9afb84d1f9f5f 441 Gene3D G3DSA:3.40.640.10 104 339 6.0E-138 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Trad_1556 863470efbdab44f364c9afb84d1f9f5f 441 SUPERFAMILY SSF53383 55 439 1.61E-109 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Trad_1556 863470efbdab44f364c9afb84d1f9f5f 441 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 286 295 - T 15-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 Trad_1556 863470efbdab44f364c9afb84d1f9f5f 441 Gene3D G3DSA:3.90.1150.10 84 431 6.0E-138 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Trad_1630 d2026317bc800b1587281dba4182127a 214 SUPERFAMILY SSF55811 11 163 1.9E-22 T 15-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Trad_1630 d2026317bc800b1587281dba4182127a 214 Gene3D G3DSA:3.90.79.10 1 173 8.2E-31 T 15-10-2018 Trad_1630 d2026317bc800b1587281dba4182127a 214 Pfam PF00293 NUDIX domain 51 151 4.4E-11 T 15-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Trad_1716 85b66e7fbc0dee2288f3d20c9904f16d 426 PIRSF PIRSF001529 1 425 1.7E-143 T 15-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Trad_1716 85b66e7fbc0dee2288f3d20c9904f16d 426 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 420 2.0E-136 T 15-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Trad_1716 85b66e7fbc0dee2288f3d20c9904f16d 426 Gene3D G3DSA:3.30.930.10 108 426 1.1E-109 T 15-10-2018 Trad_1716 85b66e7fbc0dee2288f3d20c9904f16d 426 SUPERFAMILY SSF55681 117 421 1.27E-88 T 15-10-2018 Trad_1716 85b66e7fbc0dee2288f3d20c9904f16d 426 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 425 36.85 T 15-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Trad_1716 85b66e7fbc0dee2288f3d20c9904f16d 426 SUPERFAMILY SSF46589 1 115 6.8E-25 T 15-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 Trad_1716 85b66e7fbc0dee2288f3d20c9904f16d 426 PRINTS PR00981 Seryl-tRNA synthetase signature 264 276 1.5E-25 T 15-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Trad_1716 85b66e7fbc0dee2288f3d20c9904f16d 426 PRINTS PR00981 Seryl-tRNA synthetase signature 276 289 1.5E-25 T 15-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Trad_1716 85b66e7fbc0dee2288f3d20c9904f16d 426 PRINTS PR00981 Seryl-tRNA synthetase signature 316 329 1.5E-25 T 15-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Trad_1716 85b66e7fbc0dee2288f3d20c9904f16d 426 PRINTS PR00981 Seryl-tRNA synthetase signature 351 367 1.5E-25 T 15-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Trad_1716 85b66e7fbc0dee2288f3d20c9904f16d 426 PRINTS PR00981 Seryl-tRNA synthetase signature 333 349 1.5E-25 T 15-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Trad_1716 85b66e7fbc0dee2288f3d20c9904f16d 426 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 223 402 1.1E-28 T 15-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Trad_1716 85b66e7fbc0dee2288f3d20c9904f16d 426 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 110 8.7E-26 T 15-10-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 Trad_1716 85b66e7fbc0dee2288f3d20c9904f16d 426 Gene3D G3DSA:1.10.287.40 1 107 2.1E-21 T 15-10-2018 Trad_0518 121e1ef11061551bd124562f33eb538a 287 SUPERFAMILY SSF53448 10 238 1.08E-43 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Trad_0518 121e1ef11061551bd124562f33eb538a 287 Pfam PF00535 Glycosyl transferase family 2 15 165 1.1E-24 T 15-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Trad_0518 121e1ef11061551bd124562f33eb538a 287 Gene3D G3DSA:3.90.550.10 2 252 7.6E-53 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Trad_2751 e78fa8c1eb96f053a38d5539ef06e20d 346 Gene3D G3DSA:3.40.50.300 34 280 2.4E-77 T 15-10-2018 Trad_2751 e78fa8c1eb96f053a38d5539ef06e20d 346 SUPERFAMILY SSF52540 32 344 2.13E-66 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_2751 e78fa8c1eb96f053a38d5539ef06e20d 346 Pfam PF13469 Sulfotransferase family 40 243 2.1E-15 T 15-10-2018 Trad_2133 90faa3e5b77ad8f8c89cb32dd4e74d8e 93 Pfam PF04365 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system 10 83 6.9E-11 T 15-10-2018 IPR007460 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system Trad_2133 90faa3e5b77ad8f8c89cb32dd4e74d8e 93 Gene3D G3DSA:3.10.450.530 2 86 3.4E-6 T 15-10-2018 IPR038573 Ribonuclease toxin BrnT superfamily Trad_2754 c2f5ffd995fb734f01e0d9fd7060d977 229 SUPERFAMILY SSF69593 4 202 1.07E-43 T 15-10-2018 Trad_2754 c2f5ffd995fb734f01e0d9fd7060d977 229 SMART SM00563 47 157 9.2E-29 T 15-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 Trad_2754 c2f5ffd995fb734f01e0d9fd7060d977 229 Pfam PF01553 Acyltransferase 33 154 9.1E-22 T 15-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 Trad_2851 fdedaad7a035c8651800559fb82bd4fc 563 Gene3D G3DSA:3.40.630.40 323 556 7.0E-65 T 15-10-2018 Trad_2851 fdedaad7a035c8651800559fb82bd4fc 563 SUPERFAMILY SSF53187 333 549 8.48E-50 T 15-10-2018 Trad_2851 fdedaad7a035c8651800559fb82bd4fc 563 SMART SM00646 393 546 1.5E-30 T 15-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 Trad_2851 fdedaad7a035c8651800559fb82bd4fc 563 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 335 546 2.1E-49 T 15-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 Trad_0388 1cf82ee30c0ca72a64c6abda1bcf36a2 335 SUPERFAMILY SSF53335 146 292 2.41E-30 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Trad_0388 1cf82ee30c0ca72a64c6abda1bcf36a2 335 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 251 257 - T 15-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Trad_0388 1cf82ee30c0ca72a64c6abda1bcf36a2 335 Pfam PF01170 Putative RNA methylase family UPF0020 153 325 5.8E-36 T 15-10-2018 IPR000241 Putative RNA methylase domain Trad_0388 1cf82ee30c0ca72a64c6abda1bcf36a2 335 Gene3D G3DSA:3.40.50.150 151 334 2.5E-45 T 15-10-2018 Trad_1580 fbc37e622f2bae032cd38cbc20ff4d17 133 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 6 124 16.307 T 15-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 Trad_1580 fbc37e622f2bae032cd38cbc20ff4d17 133 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 8 119 4.0E-21 T 15-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 Trad_0412 e560a340e31858272aef5fad80836d57 152 Gene3D G3DSA:1.10.8.640 14 95 7.4E-23 T 15-10-2018 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily Trad_0412 e560a340e31858272aef5fad80836d57 152 Pfam PF03918 Cytochrome C biogenesis protein 18 137 2.8E-32 T 15-10-2018 IPR005616 CcmH/CycL/Ccl2/NrfF family Trad_0623 c159f3d91f786e9a2cb00bcfacf99cc9 181 SUPERFAMILY SSF53271 20 160 1.84E-26 T 15-10-2018 IPR029057 Phosphoribosyltransferase-like Trad_0623 c159f3d91f786e9a2cb00bcfacf99cc9 181 Pfam PF00156 Phosphoribosyl transferase domain 35 163 6.7E-20 T 15-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 Trad_0623 c159f3d91f786e9a2cb00bcfacf99cc9 181 Gene3D G3DSA:3.40.50.2020 1 172 3.1E-49 T 15-10-2018 Trad_0966 d63c0425aff034a85ad19936493049e0 113 SUPERFAMILY SSF54909 4 108 1.58E-19 T 15-10-2018 IPR011008 Dimeric alpha-beta barrel Trad_0966 d63c0425aff034a85ad19936493049e0 113 Gene3D G3DSA:3.30.70.1060 3 109 3.9E-22 T 15-10-2018 Trad_0966 d63c0425aff034a85ad19936493049e0 113 Pfam PF03795 YCII-related domain 23 95 5.0E-10 T 15-10-2018 IPR005545 YCII-related Trad_0768 2a533af02fe1a94efcd6767d333c625c 280 Pfam PF00005 ABC transporter 39 195 1.6E-30 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Trad_0768 2a533af02fe1a94efcd6767d333c625c 280 Gene3D G3DSA:3.40.50.300 17 269 3.6E-62 T 15-10-2018 Trad_0768 2a533af02fe1a94efcd6767d333c625c 280 ProSitePatterns PS00211 ABC transporters family signature. 168 182 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Trad_0768 2a533af02fe1a94efcd6767d333c625c 280 SUPERFAMILY SSF52540 18 258 1.84E-56 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_0768 2a533af02fe1a94efcd6767d333c625c 280 SMART SM00382 48 244 9.4E-12 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_0119 f8986a446d07eacb937ff44d89e33903 217 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 18 34 4.9E-7 T 15-10-2018 Trad_0119 f8986a446d07eacb937ff44d89e33903 217 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 45 59 4.9E-7 T 15-10-2018 Trad_0119 f8986a446d07eacb937ff44d89e33903 217 SUPERFAMILY SSF53335 16 146 5.2E-17 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Trad_0119 f8986a446d07eacb937ff44d89e33903 217 Pfam PF02384 N-6 DNA Methylase 14 62 5.8E-5 T 15-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 Trad_0119 f8986a446d07eacb937ff44d89e33903 217 Gene3D G3DSA:3.40.50.150 6 170 2.0E-17 T 15-10-2018 Trad_1243 4e33a641e49f728f511ca343b841348a 395 SUPERFAMILY SSF51905 127 257 2.27E-21 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Trad_1243 4e33a641e49f728f511ca343b841348a 395 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 4.5E-5 T 15-10-2018 Trad_1243 4e33a641e49f728f511ca343b841348a 395 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 242 257 4.5E-5 T 15-10-2018 Trad_1243 4e33a641e49f728f511ca343b841348a 395 Gene3D G3DSA:3.50.50.60 7 321 2.5E-100 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Trad_1243 4e33a641e49f728f511ca343b841348a 395 SUPERFAMILY SSF51905 5 152 1.3E-28 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Trad_1243 4e33a641e49f728f511ca343b841348a 395 Gene3D G3DSA:3.50.50.60 119 257 2.5E-100 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Trad_1243 4e33a641e49f728f511ca343b841348a 395 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 298 1.7E-12 T 15-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Trad_1766 91ab0e593583f6a1c6ae1138c674fe68 416 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 8 410 1.3E-139 T 15-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 Trad_1766 91ab0e593583f6a1c6ae1138c674fe68 416 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 6 411 49.556 T 15-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 Trad_1766 91ab0e593583f6a1c6ae1138c674fe68 416 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 8 410 3.1E-134 T 15-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 Trad_1766 91ab0e593583f6a1c6ae1138c674fe68 416 SUPERFAMILY SSF51713 6 410 1.44E-134 T 15-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 Trad_1766 91ab0e593583f6a1c6ae1138c674fe68 416 Pfam PF01702 Queuine tRNA-ribosyltransferase 163 408 1.6E-80 T 15-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 Trad_2080 abf8277f60c45ebd73a90d6edabac178 380 SUPERFAMILY SSF101898 38 248 6.02E-11 T 15-10-2018 Trad_2080 abf8277f60c45ebd73a90d6edabac178 380 Gene3D G3DSA:2.130.10.10 123 380 3.4E-5 T 15-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Trad_1762 e2f4b86bd2802b21d4b2f1c1f5be0e4d 144 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 13 123 2.2E-20 T 15-10-2018 Trad_1762 e2f4b86bd2802b21d4b2f1c1f5be0e4d 144 Gene3D G3DSA:3.10.180.10 11 139 4.7E-35 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Trad_1762 e2f4b86bd2802b21d4b2f1c1f5be0e4d 144 TIGRFAM TIGR03081 metmalonyl_epim: methylmalonyl-CoA epimerase 12 138 6.1E-36 T 15-10-2018 IPR017515 Methylmalonyl-CoA epimerase KEGG: 00280+5.1.99.1|KEGG: 00630+5.1.99.1|KEGG: 00640+5.1.99.1|KEGG: 00720+5.1.99.1|MetaCyc: PWY-5741|MetaCyc: PWY-5743|MetaCyc: PWY-5789|MetaCyc: PWY-6728|MetaCyc: PWY-7384|MetaCyc: PWY-7854|Reactome: R-HSA-71032 Trad_1762 e2f4b86bd2802b21d4b2f1c1f5be0e4d 144 SUPERFAMILY SSF54593 3 141 2.17E-28 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Trad_1156 0192f7cd34da6bd62a3bdf39efcfd956 298 SUPERFAMILY SSF52540 16 252 7.94E-55 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_1156 0192f7cd34da6bd62a3bdf39efcfd956 298 SMART SM00382 45 236 8.1E-13 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_1156 0192f7cd34da6bd62a3bdf39efcfd956 298 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Trad_1156 0192f7cd34da6bd62a3bdf39efcfd956 298 Pfam PF00005 ABC transporter 36 188 6.2E-27 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Trad_1156 0192f7cd34da6bd62a3bdf39efcfd956 298 Gene3D G3DSA:3.40.50.300 21 275 1.6E-63 T 15-10-2018 Trad_1697 bf48d5f5662d1e0ed3ced8e40c2ed557 309 Pfam PF02653 Branched-chain amino acid transport system / permease component 13 282 4.8E-36 T 15-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Trad_1769 a9c73bb20f24e4925f3afc557cbed5e7 374 TIGRFAM TIGR00876 tal_mycobact: transaldolase 13 361 8.4E-98 T 15-10-2018 IPR004732 Transaldolase type 2 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 Trad_1769 a9c73bb20f24e4925f3afc557cbed5e7 374 SUPERFAMILY SSF51569 1 366 4.27E-75 T 15-10-2018 Trad_1769 a9c73bb20f24e4925f3afc557cbed5e7 374 ProSitePatterns PS00958 Transaldolase active site. 136 153 - T 15-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 Trad_1769 a9c73bb20f24e4925f3afc557cbed5e7 374 Gene3D G3DSA:3.20.20.70 1 367 1.9E-149 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Trad_1769 a9c73bb20f24e4925f3afc557cbed5e7 374 Hamap MF_00493 Transaldolase [tal]. 1 373 132.869 T 15-10-2018 IPR004732 Transaldolase type 2 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 Trad_1769 a9c73bb20f24e4925f3afc557cbed5e7 374 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 15 362 4.4E-81 T 15-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 Trad_1769 a9c73bb20f24e4925f3afc557cbed5e7 374 PIRSF PIRSF036915 1 374 1.1E-139 T 15-10-2018 IPR004732 Transaldolase type 2 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 Trad_0886 03479899a33412b699997463827d51cf 211 Pfam PF03458 UPF0126 domain 12 86 4.2E-17 T 15-10-2018 IPR005115 Uncharacterised domain UPF0126 Trad_0886 03479899a33412b699997463827d51cf 211 Pfam PF03458 UPF0126 domain 99 172 1.6E-18 T 15-10-2018 IPR005115 Uncharacterised domain UPF0126 Trad_1623 e6ea1f56fcf1d06e5b43668ca55398f8 574 TIGRFAM TIGR00649 MG423: beta-CASP ribonuclease, RNase J family 32 571 4.2E-164 T 15-10-2018 IPR004613 Ribonuclease J GO:0003723|GO:0046872 Trad_1623 e6ea1f56fcf1d06e5b43668ca55398f8 574 Gene3D G3DSA:3.40.50.10710 233 382 1.3E-176 T 15-10-2018 Trad_1623 e6ea1f56fcf1d06e5b43668ca55398f8 574 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 387 428 6.6E-7 T 15-10-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain Trad_1623 e6ea1f56fcf1d06e5b43668ca55398f8 574 SUPERFAMILY SSF56281 31 449 3.3E-86 T 15-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Trad_1623 e6ea1f56fcf1d06e5b43668ca55398f8 574 Pfam PF00753 Metallo-beta-lactamase superfamily 42 194 1.2E-12 T 15-10-2018 IPR001279 Metallo-beta-lactamase Trad_1623 e6ea1f56fcf1d06e5b43668ca55398f8 574 Gene3D G3DSA:3.60.15.10 32 463 1.3E-176 T 15-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Trad_1623 e6ea1f56fcf1d06e5b43668ca55398f8 574 SMART SM00849 43 241 2.3E-19 T 15-10-2018 IPR001279 Metallo-beta-lactamase Trad_1623 e6ea1f56fcf1d06e5b43668ca55398f8 574 Gene3D G3DSA:3.10.20.580 476 573 8.0E-28 T 15-10-2018 Trad_1623 e6ea1f56fcf1d06e5b43668ca55398f8 574 PIRSF PIRSF004803 22 574 6.7E-214 T 15-10-2018 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 Trad_1623 e6ea1f56fcf1d06e5b43668ca55398f8 574 Hamap MF_01491 Ribonuclease J [rnj]. 26 574 40.762 T 15-10-2018 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 Trad_0806 6bfa3c50472476d33fb29da5edcff067 365 SUPERFAMILY SSF52833 211 329 4.33E-8 T 15-10-2018 IPR036249 Thioredoxin-like superfamily Trad_0806 6bfa3c50472476d33fb29da5edcff067 365 Gene3D G3DSA:3.40.30.10 199 359 2.5E-7 T 15-10-2018 Trad_0604 92ac6645ad1de679f43c29fe54ccf61f 517 TIGRFAM TIGR00217 malQ: 4-alpha-glucanotransferase 3 493 7.0E-126 T 15-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 Trad_0604 92ac6645ad1de679f43c29fe54ccf61f 517 Pfam PF02446 4-alpha-glucanotransferase 9 472 2.6E-173 T 15-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 Trad_0604 92ac6645ad1de679f43c29fe54ccf61f 517 Gene3D G3DSA:3.20.20.80 1 494 2.1E-207 T 15-10-2018 Trad_0604 92ac6645ad1de679f43c29fe54ccf61f 517 SUPERFAMILY SSF51445 3 493 1.63E-181 T 15-10-2018 IPR017853 Glycoside hydrolase superfamily Trad_0458 62c8084dd4f6326117d96071646961ab 103 Pfam PF06291 Bor protein 23 102 9.0E-25 T 15-10-2018 IPR010438 Bor GO:0009279 Trad_0458 62c8084dd4f6326117d96071646961ab 103 ProDom PD020173 BOR LIPOPROTEIN PLASMID ISS HOMOLOG MEMBRANE FROM PRECURSOR PALMITATE DLP12 1 102 1.0E-19 T 15-10-2018 IPR010438 Bor GO:0009279 Trad_0972 fe004a1433de0ba490cc45db44ec6f6d 433 Gene3D G3DSA:1.10.3470.10 135 346 1.2E-5 T 15-10-2018 IPR037294 ABC transporter, BtuC-like Trad_0972 fe004a1433de0ba490cc45db44ec6f6d 433 Pfam PF02653 Branched-chain amino acid transport system / permease component 89 162 3.1E-12 T 15-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Trad_0972 fe004a1433de0ba490cc45db44ec6f6d 433 Pfam PF02653 Branched-chain amino acid transport system / permease component 176 417 1.6E-34 T 15-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Trad_1356 5ed4ace8c5e3f769a8cd15260eb9b01c 176 Pfam PF02698 DUF218 domain 29 163 4.3E-24 T 15-10-2018 IPR003848 Domain of unknown function DUF218 Trad_2110 5c3153d52072f783c2f325c1e97464b1 98 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 5 85 2.7E-7 T 15-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family Trad_2110 5c3153d52072f783c2f325c1e97464b1 98 SUPERFAMILY SSF143011 2 84 2.88E-10 T 15-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily Trad_2110 5c3153d52072f783c2f325c1e97464b1 98 Gene3D G3DSA:3.30.2310.20 1 98 2.2E-15 T 15-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily Trad_2306 a7567b7559f437ca08cf2e315f8e6ba1 210 TIGRFAM TIGR01907 casE_Cse3: CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI 1 209 5.2E-32 T 15-10-2018 IPR010179 CRISPR-associated protein Cse3 Trad_2306 a7567b7559f437ca08cf2e315f8e6ba1 210 Gene3D G3DSA:3.30.70.1200 1 87 8.4E-25 T 15-10-2018 Trad_2306 a7567b7559f437ca08cf2e315f8e6ba1 210 SUPERFAMILY SSF117987 1 75 4.45E-20 T 15-10-2018 Trad_2306 a7567b7559f437ca08cf2e315f8e6ba1 210 Gene3D G3DSA:3.30.70.1210 88 208 2.2E-31 T 15-10-2018 Trad_2306 a7567b7559f437ca08cf2e315f8e6ba1 210 SUPERFAMILY SSF117987 89 209 2.62E-29 T 15-10-2018 Trad_2306 a7567b7559f437ca08cf2e315f8e6ba1 210 Pfam PF08798 CRISPR associated protein 1 209 1.3E-59 T 15-10-2018 IPR010179 CRISPR-associated protein Cse3 Trad_2306 a7567b7559f437ca08cf2e315f8e6ba1 210 SMART SM01101 1 209 1.8E-65 T 15-10-2018 IPR010179 CRISPR-associated protein Cse3 Trad_2298 7b6afdaf157efaa1d7e960b360cb4e42 515 Pfam PF01547 Bacterial extracellular solute-binding protein 38 220 1.0E-10 T 15-10-2018 IPR006059 Bacterial extracellular solute-binding protein Trad_2298 7b6afdaf157efaa1d7e960b360cb4e42 515 Gene3D G3DSA:3.40.190.10 147 507 2.1E-113 T 15-10-2018 Trad_2298 7b6afdaf157efaa1d7e960b360cb4e42 515 Gene3D G3DSA:3.40.190.10 49 418 2.1E-113 T 15-10-2018 Trad_2298 7b6afdaf157efaa1d7e960b360cb4e42 515 SUPERFAMILY SSF53850 23 508 5.43E-74 T 15-10-2018 Trad_2354 880da9cb6ba978ff3ac6e2bcd017e597 197 Gene3D G3DSA:1.20.1510.10 9 190 3.6E-12 T 15-10-2018 IPR027469 Cation efflux transmembrane domain superfamily Trad_2354 880da9cb6ba978ff3ac6e2bcd017e597 197 Pfam PF01545 Cation efflux family 15 177 3.4E-14 T 15-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 Trad_2354 880da9cb6ba978ff3ac6e2bcd017e597 197 SUPERFAMILY SSF161111 8 188 5.49E-31 T 15-10-2018 IPR027469 Cation efflux transmembrane domain superfamily Trad_0396 084692223a5f3d5d279c1fa3b6380a49 243 SUPERFAMILY SSF52540 10 193 3.34E-16 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_0396 084692223a5f3d5d279c1fa3b6380a49 243 Gene3D G3DSA:3.40.50.300 65 222 3.6E-9 T 15-10-2018 Trad_1274 c6d2444f4f718c9bfa46e030a9535083 94 Pfam PF08899 Domain of unknown function (DUF1844) 5 79 6.2E-20 T 15-10-2018 IPR014995 Protein of unknown function DUF1844 Trad_2419 daadeec96ea43f9af91abebc01a83669 180 Pfam PF02417 Chromate transporter 5 175 2.4E-41 T 15-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 Trad_1696 6afe1f2134d8e1498cff6f1a61f6ff14 381 Pfam PF02653 Branched-chain amino acid transport system / permease component 61 339 2.0E-37 T 15-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Trad_0339 88f895f8eac7286daf1e86641953c9a2 291 Pfam PF00892 EamA-like transporter family 164 289 8.6E-8 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Trad_0339 88f895f8eac7286daf1e86641953c9a2 291 Pfam PF00892 EamA-like transporter family 2 132 6.2E-7 T 15-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Trad_0339 88f895f8eac7286daf1e86641953c9a2 291 SUPERFAMILY SSF103481 40 136 1.83E-8 T 15-10-2018 Trad_0339 88f895f8eac7286daf1e86641953c9a2 291 SUPERFAMILY SSF103481 197 289 6.28E-11 T 15-10-2018 Trad_2394 83f788b99cf8195ae88e8c469bc835a7 264 SUPERFAMILY SSF102522 3 150 3.27E-7 T 15-10-2018 IPR023228 S-adenosyl-l-methionine hydroxide adenosyltransferase, N-terminal Trad_2394 83f788b99cf8195ae88e8c469bc835a7 264 Pfam PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase 4 224 4.0E-11 T 15-10-2018 IPR002747 SAM-dependent chlorinase/fluorinase Trad_0062 6042f935c81ca445185bf885c02e300e 385 Gene3D G3DSA:3.60.70.12 1 258 6.7E-87 T 15-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 Trad_0062 6042f935c81ca445185bf885c02e300e 385 TIGRFAM TIGR00120 ArgJ: glutamate N-acetyltransferase/amino-acid acetyltransferase 3 385 5.4E-110 T 15-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 Trad_0062 6042f935c81ca445185bf885c02e300e 385 SUPERFAMILY SSF56266 8 382 1.73E-115 T 15-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 Trad_0062 6042f935c81ca445185bf885c02e300e 385 ProDom PD004193 ACETYLTRANSFERASE ORNITHINE ARGININE BIOSYNTHESIS ARGJ GLUTAMATE N-ACETYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIFUNCTIONAL 19 385 1.0E-68 T 15-10-2018 Trad_0062 6042f935c81ca445185bf885c02e300e 385 Pfam PF01960 ArgJ family 13 385 6.3E-127 T 15-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 Trad_0062 6042f935c81ca445185bf885c02e300e 385 Hamap MF_01106 Arginine biosynthesis bifunctional protein ArgJ [argJ]. 1 385 121.613 T 15-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 Trad_0062 6042f935c81ca445185bf885c02e300e 385 Gene3D G3DSA:3.10.20.340 259 385 2.5E-40 T 15-10-2018 Trad_2498 b273d0f97e4e0122054dd95394153d86 301 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 22 156 3.9E-37 T 15-10-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 Trad_2498 b273d0f97e4e0122054dd95394153d86 301 Gene3D G3DSA:3.30.2350.10 2 251 3.0E-67 T 15-10-2018 Trad_2498 b273d0f97e4e0122054dd95394153d86 301 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 1 300 14.461 T 15-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 Trad_2498 b273d0f97e4e0122054dd95394153d86 301 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 244 295 4.8E-5 T 15-10-2018 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 Trad_2498 b273d0f97e4e0122054dd95394153d86 301 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 4 229 1.8E-55 T 15-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 Trad_2498 b273d0f97e4e0122054dd95394153d86 301 SUPERFAMILY SSF55120 4 232 1.21E-61 T 15-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Trad_2579 2b6cc26d2c1de6c0f5921c1d55338944 257 Pfam PF00583 Acetyltransferase (GNAT) family 147 243 1.6E-7 T 15-10-2018 IPR000182 GNAT domain Trad_2579 2b6cc26d2c1de6c0f5921c1d55338944 257 Gene3D G3DSA:3.40.630.30 1 257 3.3E-22 T 15-10-2018 Trad_2579 2b6cc26d2c1de6c0f5921c1d55338944 257 SUPERFAMILY SSF55729 14 253 1.49E-22 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase Trad_1378 676c70a2d31efb52dbeb949b1f7c84d7 254 TIGRFAM TIGR00696 wecG_tagA_cpsF: glycosyltransferase, WecB/TagA/CpsF family 66 237 2.1E-40 T 15-10-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 Trad_1378 676c70a2d31efb52dbeb949b1f7c84d7 254 Pfam PF03808 Glycosyl transferase WecB/TagA/CpsF family 69 231 2.9E-50 T 15-10-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 Trad_0975 09699d3337b2fcf4eda0608eb49b8248 261 Gene3D G3DSA:3.40.50.300 24 261 6.2E-65 T 15-10-2018 Trad_0975 09699d3337b2fcf4eda0608eb49b8248 261 SUPERFAMILY SSF52540 27 257 2.5E-59 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_0975 09699d3337b2fcf4eda0608eb49b8248 261 ProSitePatterns PS00211 ABC transporters family signature. 161 175 - T 15-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Trad_0975 09699d3337b2fcf4eda0608eb49b8248 261 Pfam PF00005 ABC transporter 43 188 1.5E-27 T 15-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Trad_0975 09699d3337b2fcf4eda0608eb49b8248 261 SMART SM00382 52 237 1.6E-6 T 15-10-2018 IPR003593 AAA+ ATPase domain Trad_0975 09699d3337b2fcf4eda0608eb49b8248 261 PIRSF PIRSF039137 23 261 4.7E-103 T 15-10-2018 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein GO:0015658|GO:0015803 Trad_2870 40277e2892ef440239458db9546ddbf2 310 SUPERFAMILY SSF64005 74 305 2.49E-79 T 15-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 Trad_2870 40277e2892ef440239458db9546ddbf2 310 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 255 272 - T 15-10-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 Trad_2870 40277e2892ef440239458db9546ddbf2 310 Pfam PF01255 Putative undecaprenyl diphosphate synthase 83 309 2.9E-75 T 15-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 Trad_2870 40277e2892ef440239458db9546ddbf2 310 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 76 310 38.191 T 15-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 Trad_2870 40277e2892ef440239458db9546ddbf2 310 Gene3D G3DSA:3.40.1180.10 62 310 3.1E-93 T 15-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 Trad_2870 40277e2892ef440239458db9546ddbf2 310 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 76 309 3.1E-73 T 15-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 Trad_2675 ffc47f058bff44a06d8431d1db906192 94 Pfam PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) 37 88 2.2E-17 T 15-10-2018 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 Trad_2675 ffc47f058bff44a06d8431d1db906192 94 PIRSF PIRSF028784 4 94 3.9E-27 T 15-10-2018 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 Trad_2451 59310b90aabeeec85d49d9a56c4c74fe 155 Pfam PF11292 Protein of unknown function (DUF3093) 5 99 9.8E-5 T 15-10-2018 IPR021443 Protein of unknown function DUF3093 Trad_1142 49629ffcf9e291a86a31af6c61b19489 321 Pfam PF02653 Branched-chain amino acid transport system / permease component 32 295 4.1E-46 T 15-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Trad_1448 7813f721de6df31c56771c01100f8d8f 646 TIGRFAM TIGR02577 cas_TM1794_Cmr2: CRISPR-associated protein Cas10/Cmr2, subtype III-B 166 484 3.8E-31 T 15-10-2018 IPR013407 CRISPR-associated protein Cmr2 Trad_1448 7813f721de6df31c56771c01100f8d8f 646 Gene3D G3DSA:3.30.70.2220 2 256 5.8E-33 T 15-10-2018 IPR038242 Cmr2, N-terminal domain superfamily Trad_1448 7813f721de6df31c56771c01100f8d8f 646 Gene3D G3DSA:3.30.70.2230 360 511 2.7E-39 T 15-10-2018 Trad_1448 7813f721de6df31c56771c01100f8d8f 646 Pfam PF12469 CRISPR-associated protein 5 115 3.4E-21 T 15-10-2018 IPR024615 CRISPR-associated protein Cmr2, N-terminal Trad_2299 57136df064f0298f86d01ed1d56d3306 299 Gene3D G3DSA:1.10.3720.10 4 289 2.3E-63 T 15-10-2018 IPR035906 MetI-like superfamily Trad_2299 57136df064f0298f86d01ed1d56d3306 299 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 71 289 1.0E-8 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Trad_2299 57136df064f0298f86d01ed1d56d3306 299 SUPERFAMILY SSF161098 11 297 6.93E-50 T 15-10-2018 IPR035906 MetI-like superfamily Trad_1616 941a5d4c7d906f090984ff05dacb31c3 415 Pfam PF00534 Glycosyl transferases group 1 242 396 3.5E-33 T 15-10-2018 IPR001296 Glycosyl transferase, family 1 Trad_1616 941a5d4c7d906f090984ff05dacb31c3 415 SUPERFAMILY SSF53756 52 413 1.76E-70 T 15-10-2018 Trad_1616 941a5d4c7d906f090984ff05dacb31c3 415 Gene3D G3DSA:3.40.50.2000 244 400 3.1E-41 T 15-10-2018 Trad_1616 941a5d4c7d906f090984ff05dacb31c3 415 Gene3D G3DSA:3.40.50.2000 49 231 9.6E-16 T 15-10-2018 Trad_1616 941a5d4c7d906f090984ff05dacb31c3 415 Pfam PF13439 Glycosyltransferase Family 4 63 223 5.3E-20 T 15-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Trad_0721 040c22a5473ffcf8a6c62962a45869d9 281 SUPERFAMILY SSF161098 9 281 7.57E-74 T 15-10-2018 IPR035906 MetI-like superfamily Trad_0721 040c22a5473ffcf8a6c62962a45869d9 281 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 98 271 6.8E-20 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Trad_0721 040c22a5473ffcf8a6c62962a45869d9 281 Gene3D G3DSA:1.10.3720.10 7 268 7.0E-68 T 15-10-2018 IPR035906 MetI-like superfamily Trad_0452 142de94fa47ea8c211a6dc40ada0186e 224 SUPERFAMILY SSF49299 43 129 9.16E-10 T 15-10-2018 IPR035986 PKD domain superfamily Trad_0452 142de94fa47ea8c211a6dc40ada0186e 224 SUPERFAMILY SSF49299 138 223 2.75E-16 T 15-10-2018 IPR035986 PKD domain superfamily Trad_0452 142de94fa47ea8c211a6dc40ada0186e 224 SMART SM00089 44 130 5.1E-4 T 15-10-2018 IPR022409 PKD/Chitinase domain Trad_0452 142de94fa47ea8c211a6dc40ada0186e 224 SMART SM00089 142 224 2.4E-10 T 15-10-2018 IPR022409 PKD/Chitinase domain Trad_0452 142de94fa47ea8c211a6dc40ada0186e 224 Gene3D G3DSA:2.60.40.10 136 222 7.1E-16 T 15-10-2018 IPR013783 Immunoglobulin-like fold Trad_0452 142de94fa47ea8c211a6dc40ada0186e 224 Gene3D G3DSA:2.60.40.10 40 128 1.8E-9 T 15-10-2018 IPR013783 Immunoglobulin-like fold Trad_0452 142de94fa47ea8c211a6dc40ada0186e 224 Pfam PF00801 PKD domain 156 213 1.4E-9 T 15-10-2018 IPR000601 PKD domain Trad_0452 142de94fa47ea8c211a6dc40ada0186e 224 Pfam PF00801 PKD domain 60 112 1.0E-5 T 15-10-2018 IPR000601 PKD domain Trad_2849 aa503dd69cf1336b1a5f38dc90fd2075 173 Pfam PF06295 Protein of unknown function (DUF1043) 10 99 2.5E-18 T 15-10-2018 IPR009386 Protein of unknown function DUF1043 Trad_0541 2538398f0e7dca0882491c3e6367d529 865 Gene3D G3DSA:3.60.10.10 473 771 2.2E-32 T 15-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Trad_0541 2538398f0e7dca0882491c3e6367d529 865 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 476 764 1.4E-11 T 15-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase Trad_0541 2538398f0e7dca0882491c3e6367d529 865 SUPERFAMILY SSF56219 471 772 5.52E-32 T 15-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Trad_1289 f5004118ce87461e77c9758cb65154c4 191 Pfam PF13302 Acetyltransferase (GNAT) domain 11 147 5.4E-23 T 15-10-2018 IPR000182 GNAT domain Trad_1289 f5004118ce87461e77c9758cb65154c4 191 Gene3D G3DSA:3.40.630.30 2 190 3.6E-52 T 15-10-2018 Trad_1289 f5004118ce87461e77c9758cb65154c4 191 SUPERFAMILY SSF55729 4 173 2.88E-39 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase Trad_0410 d7e164e1018e5628612b517eb3cbc667 193 Gene3D G3DSA:2.102.10.10 62 191 2.7E-24 T 15-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 Trad_0410 d7e164e1018e5628612b517eb3cbc667 193 PRINTS PR00162 Rieske 2Fe-2S subunit signature 146 158 8.8E-5 T 15-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 Trad_0410 d7e164e1018e5628612b517eb3cbc667 193 PRINTS PR00162 Rieske 2Fe-2S subunit signature 112 123 8.8E-5 T 15-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 Trad_0410 d7e164e1018e5628612b517eb3cbc667 193 PRINTS PR00162 Rieske 2Fe-2S subunit signature 160 172 8.8E-5 T 15-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 Trad_0410 d7e164e1018e5628612b517eb3cbc667 193 SUPERFAMILY SSF50022 58 188 8.64E-19 T 15-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 Trad_0410 d7e164e1018e5628612b517eb3cbc667 193 Pfam PF00355 Rieske [2Fe-2S] domain 109 174 1.7E-9 T 15-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 Trad_0490 f762417f8cb70bbcac5cfaac0cecc02a 127 Gene3D G3DSA:3.30.1490.190 75 127 8.2E-13 T 15-10-2018 Trad_0490 f762417f8cb70bbcac5cfaac0cecc02a 127 SUPERFAMILY SSF46785 3 122 2.72E-30 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Trad_0490 f762417f8cb70bbcac5cfaac0cecc02a 127 Pfam PF01475 Ferric uptake regulator family 3 118 2.0E-23 T 15-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 Trad_0490 f762417f8cb70bbcac5cfaac0cecc02a 127 Gene3D G3DSA:1.10.10.10 1 74 3.8E-16 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Trad_1710 b7595846524d98e40d98780797a156d1 548 TIGRFAM TIGR00641 acid_CoA_mut_N: methylmalonyl-CoA mutase N-terminal domain 26 546 2.0E-226 T 15-10-2018 IPR006098 Methylmalonyl-CoA mutase, alpha chain, catalytic GO:0004494|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 Trad_1710 b7595846524d98e40d98780797a156d1 548 Gene3D G3DSA:3.20.20.240 1 548 2.3E-243 T 15-10-2018 Trad_1710 b7595846524d98e40d98780797a156d1 548 Pfam PF01642 Methylmalonyl-CoA mutase 27 540 5.3E-222 T 15-10-2018 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0016866|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 Trad_1710 b7595846524d98e40d98780797a156d1 548 SUPERFAMILY SSF51703 4 542 9.03E-208 T 15-10-2018 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 Trad_2861 ef3d7df6d2c29a69cd781178549d7540 305 Pfam PF16363 GDP-mannose 4,6 dehydratase 5 294 1.0E-53 T 15-10-2018 IPR016040 NAD(P)-binding domain Trad_2861 ef3d7df6d2c29a69cd781178549d7540 305 Gene3D G3DSA:3.40.50.720 4 284 4.8E-90 T 15-10-2018 Trad_2861 ef3d7df6d2c29a69cd781178549d7540 305 Gene3D G3DSA:3.90.25.10 168 291 4.8E-90 T 15-10-2018 Trad_2861 ef3d7df6d2c29a69cd781178549d7540 305 SUPERFAMILY SSF51735 1 302 2.81E-73 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_0087 65f25a08e7622363e0decff3e0cc38da 218 SUPERFAMILY SSF52540 24 177 1.16E-20 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_0087 65f25a08e7622363e0decff3e0cc38da 218 Gene3D G3DSA:3.40.50.300 4 208 4.7E-40 T 15-10-2018 Trad_2788 2b2bf0b57120b6e99b92f419edd2031a 291 Pfam PF01148 Cytidylyltransferase family 11 286 7.8E-59 T 15-10-2018 Trad_2886 a1e0a2fac41ae3a12fb488c7f49f7128 496 SUPERFAMILY SSF52374 246 469 2.25E-6 T 15-10-2018 Trad_2520 49c04db04d29ced10c856a81e425e061 421 PRINTS PR01035 Tetracycline resistance protein signature 139 161 4.0E-9 T 15-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 Trad_2520 49c04db04d29ced10c856a81e425e061 421 PRINTS PR01035 Tetracycline resistance protein signature 20 36 4.0E-9 T 15-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 Trad_2520 49c04db04d29ced10c856a81e425e061 421 PRINTS PR01035 Tetracycline resistance protein signature 343 366 4.0E-9 T 15-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 Trad_2520 49c04db04d29ced10c856a81e425e061 421 PRINTS PR01035 Tetracycline resistance protein signature 109 130 4.0E-9 T 15-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 Trad_2520 49c04db04d29ced10c856a81e425e061 421 SUPERFAMILY SSF103473 9 414 1.22E-63 T 15-10-2018 IPR036259 MFS transporter superfamily Trad_2520 49c04db04d29ced10c856a81e425e061 421 Pfam PF00083 Sugar (and other) transporter 251 378 3.7E-7 T 15-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 Trad_2520 49c04db04d29ced10c856a81e425e061 421 Gene3D G3DSA:1.20.1250.20 4 218 1.6E-40 T 15-10-2018 Trad_2520 49c04db04d29ced10c856a81e425e061 421 Gene3D G3DSA:1.20.1250.20 219 421 1.5E-26 T 15-10-2018 Trad_2520 49c04db04d29ced10c856a81e425e061 421 Pfam PF07690 Major Facilitator Superfamily 15 241 3.6E-30 T 15-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Trad_0137 b587516ae4097a8c8b72f3c41a65d023 455 Pfam PF00171 Aldehyde dehydrogenase family 5 452 1.2E-133 T 15-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Trad_0137 b587516ae4097a8c8b72f3c41a65d023 455 Gene3D G3DSA:3.40.605.10 8 447 1.8E-149 T 15-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Trad_0137 b587516ae4097a8c8b72f3c41a65d023 455 Gene3D G3DSA:3.40.309.10 231 421 1.8E-149 T 15-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Trad_0137 b587516ae4097a8c8b72f3c41a65d023 455 SUPERFAMILY SSF53720 5 454 1.03E-138 T 15-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Trad_0137 b587516ae4097a8c8b72f3c41a65d023 455 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 255 266 - T 15-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 Trad_0118 788ddaec08322ce15161e77ae20e2b41 176 Gene3D G3DSA:3.40.50.300 4 174 6.6E-26 T 15-10-2018 Trad_0118 788ddaec08322ce15161e77ae20e2b41 176 Pfam PF06414 Zeta toxin 7 164 3.4E-10 T 15-10-2018 IPR010488 Zeta toxin domain GO:0005524|GO:0016301 Trad_0118 788ddaec08322ce15161e77ae20e2b41 176 SUPERFAMILY SSF52540 9 167 1.45E-13 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_2833 91aa5e7cf1b689f17358c5a65c20917b 132 Pfam PF14464 Prokaryotic homologs of the JAB domain 11 119 4.3E-23 T 15-10-2018 IPR028090 JAB domain, prokaryotic Trad_2833 91aa5e7cf1b689f17358c5a65c20917b 132 Gene3D G3DSA:3.40.140.10 5 131 5.7E-28 T 15-10-2018 Trad_2833 91aa5e7cf1b689f17358c5a65c20917b 132 SUPERFAMILY SSF102712 5 122 4.18E-24 T 15-10-2018 Trad_2833 91aa5e7cf1b689f17358c5a65c20917b 132 SMART SM00232 4 131 0.0059 T 15-10-2018 IPR000555 JAB1/MPN/MOV34 metalloenzyme domain GO:0005515 Trad_1332 effd0b3574c41c4a004996cafdfaa175 237 Pfam PF04350 Pilus assembly protein, PilO 57 193 1.1E-11 T 15-10-2018 IPR007445 Pilus assembly protein, PilO Trad_1332 effd0b3574c41c4a004996cafdfaa175 237 Gene3D G3DSA:3.30.70.60 102 209 3.5E-7 T 15-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 Trad_0127 8c8d82770292ca0e8d3854fa5c5a87d7 146 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 5 137 6.4E-19 T 15-10-2018 IPR009936 Protein of unknown function DUF1468 Trad_1885 fbfa7125c259f4a4154443510e0a5794 335 Pfam PF02653 Branched-chain amino acid transport system / permease component 10 318 2.3E-16 T 15-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Trad_2089 0ecb44bbeb3e97a09cb7ecacf57b61e9 141 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 20 135 9.5E-18 T 15-10-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like Trad_2089 0ecb44bbeb3e97a09cb7ecacf57b61e9 141 Gene3D G3DSA:3.30.530.20 15 140 6.7E-26 T 15-10-2018 IPR023393 START-like domain superfamily Trad_2089 0ecb44bbeb3e97a09cb7ecacf57b61e9 141 SUPERFAMILY SSF55961 15 135 4.63E-21 T 15-10-2018 Trad_0933 96f56089721ccc7a6e1cc59bfaadbae6 479 SUPERFAMILY SSF52743 332 442 2.62E-8 T 15-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Trad_0933 96f56089721ccc7a6e1cc59bfaadbae6 479 Gene3D G3DSA:3.40.50.200 242 441 3.1E-7 T 15-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Trad_0254 c1d9f1c44c6bd94acea75d70e0874dc7 121 Pfam PF13937 Domain of unknown function (DUF4212) 44 119 1.1E-30 T 15-10-2018 IPR019886 Sodium symporter small subunit, predicted Trad_0254 c1d9f1c44c6bd94acea75d70e0874dc7 121 TIGRFAM TIGR03647 Na_symport_sm: putative solute:sodium symporter small subunit 45 121 5.6E-31 T 15-10-2018 IPR019886 Sodium symporter small subunit, predicted Trad_1609 b062b51e30967cebf04151c75cc25f33 196 Pfam PF08478 POTRA domain, FtsQ-type 24 90 3.2E-12 T 15-10-2018 IPR013685 POTRA domain, FtsQ-type Trad_2285 64414525776d239004c05553fa86f29c 362 PIRSF PIRSF006621 56 362 2.5E-77 T 15-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 Trad_2285 64414525776d239004c05553fa86f29c 362 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 147 165 - T 15-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 Trad_2285 64414525776d239004c05553fa86f29c 362 Pfam PF01207 Dihydrouridine synthase (Dus) 65 352 1.2E-71 T 15-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 Trad_2285 64414525776d239004c05553fa86f29c 362 Gene3D G3DSA:3.20.20.70 60 290 1.8E-69 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Trad_2285 64414525776d239004c05553fa86f29c 362 SUPERFAMILY SSF51395 65 353 1.26E-69 T 15-10-2018 Trad_0613 7833dbb6de04eea33c7ffbfcc397608e 358 SUPERFAMILY SSF56059 124 351 1.65E-7 T 15-10-2018 Trad_0613 7833dbb6de04eea33c7ffbfcc397608e 358 Pfam PF14397 Sugar-transfer associated ATP-grasp 79 338 3.7E-30 T 15-10-2018 IPR039523 Alpha-L-glutamate ligase-related protein, ATP-grasp domain KEGG: 00270+6.3.2.2+6.3.2.3|KEGG: 00480+6.3.2.2+6.3.2.3|MetaCyc: PWY-6840|MetaCyc: PWY-7255 Trad_1394 7c55a3b96def050215f24f5ba088b587 82 Gene3D G3DSA:1.10.1220.10 1 43 2.7E-6 T 15-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 Trad_1394 7c55a3b96def050215f24f5ba088b587 82 Pfam PF07704 Rv0623-like transcription factor 8 47 9.0E-8 T 15-10-2018 IPR011660 Antitoxin VapB-like Trad_1394 7c55a3b96def050215f24f5ba088b587 82 SUPERFAMILY SSF47598 2 45 2.63E-7 T 15-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 Trad_2911 99fa53453d56587c47c59bf5b2b4d5e0 341 SUPERFAMILY SSF161098 91 327 1.44E-14 T 15-10-2018 IPR035906 MetI-like superfamily Trad_2911 99fa53453d56587c47c59bf5b2b4d5e0 341 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 340 8.5E-43 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Trad_0838 d485530f17742afdee9cb3264eec82de 189 Pfam PF13302 Acetyltransferase (GNAT) domain 10 150 2.0E-25 T 15-10-2018 IPR000182 GNAT domain Trad_0838 d485530f17742afdee9cb3264eec82de 189 SUPERFAMILY SSF55729 6 174 9.35E-47 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase Trad_0838 d485530f17742afdee9cb3264eec82de 189 Gene3D G3DSA:3.40.630.30 1 177 1.4E-53 T 15-10-2018 Trad_1781 8d941a49e93d4d0089650c9afdbca473 473 Pfam PF13205 Bacterial Ig-like domain 28 133 2.5E-13 T 15-10-2018 IPR032812 SbsA, Ig-like domain Trad_1781 8d941a49e93d4d0089650c9afdbca473 473 Gene3D G3DSA:2.60.40.10 191 273 1.8E-5 T 15-10-2018 IPR013783 Immunoglobulin-like fold Trad_2557 6f386ae59366119e39c9e4e994384247 200 Pfam PF02632 BioY family 44 194 9.0E-37 T 15-10-2018 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 Trad_2557 6f386ae59366119e39c9e4e994384247 200 Gene3D G3DSA:1.10.1760.20 16 195 1.6E-41 T 15-10-2018 Trad_2557 6f386ae59366119e39c9e4e994384247 200 PIRSF PIRSF016661 15 200 5.1E-39 T 15-10-2018 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 Trad_2647 a41a947bf6bcd194398a0522aed3718c 453 SUPERFAMILY SSF53474 137 404 6.24E-34 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold Trad_2647 a41a947bf6bcd194398a0522aed3718c 453 Gene3D G3DSA:3.40.50.1820 48 420 1.7E-52 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold Trad_2647 a41a947bf6bcd194398a0522aed3718c 453 Pfam PF03403 Platelet-activating factor acetylhydrolase, isoform II 140 180 1.0E-8 T 15-10-2018 IPR005065 Platelet-activating factor acetylhydrolase-like GO:0003847|GO:0016042 KEGG: 00565+3.1.1.47 Trad_0875 793671294e9470d2a3bca387890878aa 211 PRINTS PR00334 HMW kininogen signature 61 82 7.0E-6 T 15-10-2018 IPR002395 HMW kininogen Reactome: R-HSA-114608|Reactome: R-HSA-140837|Reactome: R-HSA-375276|Reactome: R-HSA-381426|Reactome: R-HSA-416476|Reactome: R-HSA-418594|Reactome: R-HSA-8957275 Trad_0875 793671294e9470d2a3bca387890878aa 211 PRINTS PR00334 HMW kininogen signature 117 139 7.0E-6 T 15-10-2018 IPR002395 HMW kininogen Reactome: R-HSA-114608|Reactome: R-HSA-140837|Reactome: R-HSA-375276|Reactome: R-HSA-381426|Reactome: R-HSA-416476|Reactome: R-HSA-418594|Reactome: R-HSA-8957275 Trad_0875 793671294e9470d2a3bca387890878aa 211 PRINTS PR00334 HMW kininogen signature 87 110 7.0E-6 T 15-10-2018 IPR002395 HMW kininogen Reactome: R-HSA-114608|Reactome: R-HSA-140837|Reactome: R-HSA-375276|Reactome: R-HSA-381426|Reactome: R-HSA-416476|Reactome: R-HSA-418594|Reactome: R-HSA-8957275 Trad_0875 793671294e9470d2a3bca387890878aa 211 Gene3D G3DSA:2.60.40.10 82 185 1.0E-5 T 15-10-2018 IPR013783 Immunoglobulin-like fold Trad_0875 793671294e9470d2a3bca387890878aa 211 SUPERFAMILY SSF81296 137 178 4.34E-6 T 15-10-2018 IPR014756 Immunoglobulin E-set Trad_1008 42300c6c3319a62e80afafb19aae1ad2 374 Pfam PF03739 Predicted permease YjgP/YjgQ family 5 368 1.4E-53 T 15-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 Trad_2384 b3ef17823a29393d687756c209b5529f 924 SUPERFAMILY SSF51621 30 924 7.38E-268 T 15-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Trad_2384 b3ef17823a29393d687756c209b5529f 924 Pfam PF00311 Phosphoenolpyruvate carboxylase 162 924 9.0E-245 T 15-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 Trad_2384 b3ef17823a29393d687756c209b5529f 924 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 581 593 - T 15-10-2018 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 Trad_2384 b3ef17823a29393d687756c209b5529f 924 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 219 235 2.1E-56 T 15-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 Trad_2384 b3ef17823a29393d687756c209b5529f 924 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 166 179 2.1E-56 T 15-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 Trad_2384 b3ef17823a29393d687756c209b5529f 924 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 424 444 2.1E-56 T 15-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 Trad_2384 b3ef17823a29393d687756c209b5529f 924 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 756 782 2.1E-56 T 15-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 Trad_2384 b3ef17823a29393d687756c209b5529f 924 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 579 599 2.1E-56 T 15-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 Trad_2384 b3ef17823a29393d687756c209b5529f 924 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 621 650 2.1E-56 T 15-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 Trad_2384 b3ef17823a29393d687756c209b5529f 924 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 280 295 2.1E-56 T 15-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 Trad_2384 b3ef17823a29393d687756c209b5529f 924 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 19 924 17.788 T 15-10-2018 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 Trad_0289 0ef4804039524eb086377ada33d63743 341 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 135 315 4.4E-48 T 15-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Trad_0289 0ef4804039524eb086377ada33d63743 341 PIRSF PIRSF000148 1 334 8.0E-123 T 15-10-2018 Trad_0289 0ef4804039524eb086377ada33d63743 341 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 2 114 4.6E-31 T 15-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 Trad_0289 0ef4804039524eb086377ada33d63743 341 Gene3D G3DSA:3.40.50.720 3 326 4.9E-133 T 15-10-2018 Trad_0289 0ef4804039524eb086377ada33d63743 341 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 1 329 33.643 T 15-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Trad_0289 0ef4804039524eb086377ada33d63743 341 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 2 330 7.1E-122 T 15-10-2018 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Trad_0289 0ef4804039524eb086377ada33d63743 341 Gene3D G3DSA:3.30.360.10 124 312 4.9E-133 T 15-10-2018 Trad_0289 0ef4804039524eb086377ada33d63743 341 SUPERFAMILY SSF55347 125 316 2.86E-65 T 15-10-2018 Trad_0289 0ef4804039524eb086377ada33d63743 341 SMART SM00859 2 117 7.0E-40 T 15-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 Trad_0289 0ef4804039524eb086377ada33d63743 341 SUPERFAMILY SSF51735 1 152 9.2E-47 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_1951 b910b0db7412e8a125702a148cbb2e5d 299 Gene3D G3DSA:3.40.630.30 155 293 2.5E-15 T 15-10-2018 Trad_1951 b910b0db7412e8a125702a148cbb2e5d 299 Pfam PF00583 Acetyltransferase (GNAT) family 178 284 6.9E-11 T 15-10-2018 IPR000182 GNAT domain Trad_1951 b910b0db7412e8a125702a148cbb2e5d 299 SUPERFAMILY SSF55729 129 286 4.63E-20 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase Trad_1951 b910b0db7412e8a125702a148cbb2e5d 299 Gene3D G3DSA:3.40.630.30 1 145 2.4E-6 T 15-10-2018 Trad_1951 b910b0db7412e8a125702a148cbb2e5d 299 SUPERFAMILY SSF55729 1 145 4.38E-7 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase Trad_0164 8b6790f4e4bdb2900a59235c681cfbd2 210 Gene3D G3DSA:3.40.630.30 9 210 3.4E-69 T 15-10-2018 Trad_0164 8b6790f4e4bdb2900a59235c681cfbd2 210 SUPERFAMILY SSF55729 13 200 1.19E-20 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase Trad_0164 8b6790f4e4bdb2900a59235c681cfbd2 210 Pfam PF00583 Acetyltransferase (GNAT) family 145 193 9.9E-8 T 15-10-2018 IPR000182 GNAT domain Trad_1230 6170547c6dc77a2931e5f8c32816de33 115 Pfam PF10711 Hypothetical protein (DUF2513) 1 93 8.7E-26 T 15-10-2018 IPR019650 Protein of unknown function DUF2513 Trad_2850 e58c1807adb2924d5463572af61442ac 439 SUPERFAMILY SSF51338 5 85 3.74E-14 T 15-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Trad_2850 e58c1807adb2924d5463572af61442ac 439 Gene3D G3DSA:2.30.40.10 10 425 5.8E-128 T 15-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Trad_2850 e58c1807adb2924d5463572af61442ac 439 SUPERFAMILY SSF51556 70 370 2.32E-87 T 15-10-2018 IPR032466 Metal-dependent hydrolase Trad_2850 e58c1807adb2924d5463572af61442ac 439 TIGRFAM TIGR02967 guan_deamin: guanine deaminase 28 427 1.4E-121 T 15-10-2018 IPR014311 Guanine deaminase GO:0006147|GO:0008270|GO:0008892 KEGG: 00230+3.5.4.3|MetaCyc: PWY-5497|MetaCyc: PWY-6606|MetaCyc: PWY-6608|MetaCyc: PWY-7442|Reactome: R-HSA-74259 Trad_2850 e58c1807adb2924d5463572af61442ac 439 SUPERFAMILY SSF51338 354 427 4.89E-5 T 15-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Trad_2850 e58c1807adb2924d5463572af61442ac 439 Gene3D G3DSA:3.20.20.140 71 389 5.8E-128 T 15-10-2018 Trad_2850 e58c1807adb2924d5463572af61442ac 439 Pfam PF01979 Amidohydrolase family 67 428 1.9E-51 T 15-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Trad_0698 ee47ebcaa6fe01b57343ccac19217d40 133 Gene3D G3DSA:3.30.70.1290 4 133 1.0E-41 T 15-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 Trad_0698 ee47ebcaa6fe01b57343ccac19217d40 133 Pfam PF01797 Transposase IS200 like 12 127 2.3E-35 T 15-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 Trad_0698 ee47ebcaa6fe01b57343ccac19217d40 133 SMART SM01321 11 127 1.3E-38 T 15-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 Trad_0698 ee47ebcaa6fe01b57343ccac19217d40 133 SUPERFAMILY SSF143422 5 128 6.15E-40 T 15-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 Trad_0415 e5c46224ab94210c2dd37849994a5648 145 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 2 144 23.669 T 15-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 Trad_0415 e5c46224ab94210c2dd37849994a5648 145 SUPERFAMILY SSF82093 31 133 6.54E-28 T 15-10-2018 IPR036127 CcmE-like superfamily GO:0005886|GO:0017003|GO:0017004 Trad_0415 e5c46224ab94210c2dd37849994a5648 145 Pfam PF03100 CcmE 7 129 5.1E-32 T 15-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 Trad_0415 e5c46224ab94210c2dd37849994a5648 145 Gene3D G3DSA:2.40.50.140 30 135 8.1E-27 T 15-10-2018 Trad_2575 e3b02fdfd638f95c7c33ea45a1436051 326 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 2 323 1.1E-120 T 15-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 Trad_2575 e3b02fdfd638f95c7c33ea45a1436051 326 Gene3D G3DSA:3.90.25.10 173 303 3.2E-117 T 15-10-2018 Trad_2575 e3b02fdfd638f95c7c33ea45a1436051 326 SUPERFAMILY SSF51735 1 324 2.53E-93 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_2575 e3b02fdfd638f95c7c33ea45a1436051 326 Gene3D G3DSA:3.40.50.720 3 249 3.2E-117 T 15-10-2018 Trad_2575 e3b02fdfd638f95c7c33ea45a1436051 326 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 249 1.2E-52 T 15-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 Trad_2769 757d10aa6983ef3c399da9efa2c1f402 294 Pfam PF00149 Calcineurin-like phosphoesterase 70 231 1.9E-9 T 15-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 Trad_2769 757d10aa6983ef3c399da9efa2c1f402 294 SUPERFAMILY SSF56300 70 290 2.81E-33 T 15-10-2018 Trad_2769 757d10aa6983ef3c399da9efa2c1f402 294 Gene3D G3DSA:3.60.21.10 69 266 2.0E-16 T 15-10-2018 IPR029052 Metallo-dependent phosphatase-like Trad_1926 607bc27355d9d31e719871cca2f2e2e9 393 Pfam PF12704 MacB-like periplasmic core domain 22 234 1.5E-15 T 15-10-2018 IPR025857 MacB-like periplasmic core domain Trad_1926 607bc27355d9d31e719871cca2f2e2e9 393 Pfam PF02687 FtsX-like permease family 290 388 1.5E-12 T 15-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Trad_1738 315513f8ce2dda1dc3a9f22414e3163f 300 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 109 266 1.3E-28 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Trad_1738 315513f8ce2dda1dc3a9f22414e3163f 300 SUPERFAMILY SSF161098 86 270 3.53E-41 T 15-10-2018 IPR035906 MetI-like superfamily Trad_1738 315513f8ce2dda1dc3a9f22414e3163f 300 Gene3D G3DSA:1.10.3720.10 82 271 4.1E-36 T 15-10-2018 IPR035906 MetI-like superfamily Trad_0531 7570560f3a0e509c68ab86fb61dbc922 223 SUPERFAMILY SSF52833 46 218 1.17E-33 T 15-10-2018 IPR036249 Thioredoxin-like superfamily Trad_0531 7570560f3a0e509c68ab86fb61dbc922 223 Gene3D G3DSA:3.40.30.10 37 222 8.1E-53 T 15-10-2018 Trad_0531 7570560f3a0e509c68ab86fb61dbc922 223 Pfam PF13462 Thioredoxin 51 218 1.2E-34 T 15-10-2018 IPR012336 Thioredoxin-like fold Trad_0726 103dee16394b34dccdb0b8002e2571c2 285 Pfam PF05067 Manganese containing catalase 1 268 5.2E-88 T 15-10-2018 IPR007760 Manganese catalase Trad_0726 103dee16394b34dccdb0b8002e2571c2 285 SUPERFAMILY SSF47240 1 269 2.56E-92 T 15-10-2018 IPR009078 Ferritin-like superfamily Trad_0726 103dee16394b34dccdb0b8002e2571c2 285 Gene3D G3DSA:1.20.1260.130 2 277 2.9E-81 T 15-10-2018 Trad_1868 d9bb429ce3094a283928e8151506d140 193 SUPERFAMILY SSF51161 57 170 4.85E-37 T 15-10-2018 IPR011004 Trimeric LpxA-like superfamily Trad_1868 d9bb429ce3094a283928e8151506d140 193 Gene3D G3DSA:2.160.10.10 67 183 2.4E-33 T 15-10-2018 Trad_1868 d9bb429ce3094a283928e8151506d140 193 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 118 152 1.3E-9 T 15-10-2018 IPR001451 Hexapeptide repeat Trad_1868 d9bb429ce3094a283928e8151506d140 193 PIRSF PIRSF000441 10 191 2.4E-50 T 15-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 Trad_1201 acd91b244ee06be74dd1fe45ff672192 536 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 315 527 6.8E-19 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Trad_1201 acd91b244ee06be74dd1fe45ff672192 536 SUPERFAMILY SSF160964 31 120 1.2E-14 T 15-10-2018 Trad_1201 acd91b244ee06be74dd1fe45ff672192 536 Gene3D G3DSA:1.10.3720.10 277 535 3.8E-63 T 15-10-2018 IPR035906 MetI-like superfamily Trad_1201 acd91b244ee06be74dd1fe45ff672192 536 SUPERFAMILY SSF161098 281 522 2.49E-54 T 15-10-2018 IPR035906 MetI-like superfamily Trad_1214 b8712fce79e4a544fe2851e95d9559bf 274 Pfam PF02621 Menaquinone biosynthesis 2 256 5.5E-83 T 15-10-2018 IPR003773 Menaquinone biosynthesis enzyme Trad_1214 b8712fce79e4a544fe2851e95d9559bf 274 Hamap MF_00996 1,4-dihydroxy-6-naphtoate synthase [mqnD]. 1 262 41.649 T 15-10-2018 IPR030869 1,4-dihydroxy-6-naphtoate synthase GO:0009234|GO:0016829 Trad_1214 b8712fce79e4a544fe2851e95d9559bf 274 Gene3D G3DSA:3.40.190.10 4 257 7.7E-106 T 15-10-2018 Trad_1214 b8712fce79e4a544fe2851e95d9559bf 274 Gene3D G3DSA:3.40.190.10 78 170 7.7E-106 T 15-10-2018 Trad_1214 b8712fce79e4a544fe2851e95d9559bf 274 SUPERFAMILY SSF53850 1 261 5.15E-83 T 15-10-2018 Trad_1671 a7a6c883d3f3f76862a8a9c656326514 214 TIGRFAM TIGR00372 cas4: CRISPR-associated protein Cas4 17 193 2.9E-41 T 15-10-2018 IPR013343 CRISPR-associated protein Cas4 Trad_1671 a7a6c883d3f3f76862a8a9c656326514 214 Gene3D G3DSA:3.90.320.10 13 194 4.1E-16 T 15-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal Trad_1671 a7a6c883d3f3f76862a8a9c656326514 214 Pfam PF01930 Domain of unknown function DUF83 18 194 1.8E-35 T 15-10-2018 IPR022765 Dna2/Cas4, domain of unknown function DUF83 Trad_0913 5628acd57374c26eab6a0fb9ab5988b0 442 Pfam PF07670 Nucleoside recognition 128 228 4.9E-7 T 15-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 Trad_2005 5d8fa21ccc7f234b8a7f4ebbfed5f42d 265 Pfam PF00149 Calcineurin-like phosphoesterase 11 222 2.1E-9 T 15-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 Trad_2005 5d8fa21ccc7f234b8a7f4ebbfed5f42d 265 Gene3D G3DSA:3.60.21.10 2 252 4.2E-20 T 15-10-2018 IPR029052 Metallo-dependent phosphatase-like Trad_2005 5d8fa21ccc7f234b8a7f4ebbfed5f42d 265 SUPERFAMILY SSF56300 10 234 1.67E-23 T 15-10-2018 Trad_2164 0031abc695ec4da4fe79dc24cacbef71 147 Pfam PF06695 Putative small multi-drug export protein 23 132 4.2E-8 T 15-10-2018 IPR009577 Putative small multi-drug export Trad_0961 0d1c397c1070259429b885a38d8f3c04 72 Gene3D G3DSA:1.10.150.20 9 64 2.7E-10 T 15-10-2018 Trad_0961 0d1c397c1070259429b885a38d8f3c04 72 Pfam PF14520 Helix-hairpin-helix domain 10 57 2.6E-6 T 15-10-2018 Trad_0961 0d1c397c1070259429b885a38d8f3c04 72 SUPERFAMILY SSF47789 16 65 2.22E-8 T 15-10-2018 Trad_1266 7d7111164fffc96cca24b14b1f372781 400 Pfam PF01594 AI-2E family transporter 19 360 3.6E-62 T 15-10-2018 IPR002549 Transmembrane protein TqsA-like Trad_2292 efa1e69bc6d099e25ef173500050687a 539 SUPERFAMILY SSF53743 17 366 5.58E-54 T 15-10-2018 IPR009015 L-fucose isomerase, N-terminal/central domain superfamily GO:0005737|GO:0005996|GO:0016861 Trad_0697 8a4a69d01911dcb85d4e6976e4dbded4 371 TIGRFAM TIGR01766 tspaseT_teng_C: transposase, IS605 OrfB family 244 316 4.5E-8 T 15-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal Trad_0697 8a4a69d01911dcb85d4e6976e4dbded4 371 Pfam PF07282 Putative transposase DNA-binding domain 289 355 4.6E-19 T 15-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal Trad_0697 8a4a69d01911dcb85d4e6976e4dbded4 371 Pfam PF01385 Probable transposase 162 275 1.4E-25 T 15-10-2018 IPR001959 Probable transposase, IS891/IS1136/IS1341 Trad_0697 8a4a69d01911dcb85d4e6976e4dbded4 371 Pfam PF12323 Helix-turn-helix domain 1 45 2.7E-10 T 15-10-2018 IPR021027 Transposase, putative, helix-turn-helix domain Trad_1254 26b3696356cbbc973fd20768af2e01ba 581 Gene3D G3DSA:2.60.120.560 344 580 3.7E-40 T 15-10-2018 Trad_1254 26b3696356cbbc973fd20768af2e01ba 581 Pfam PF06439 Domain of Unknown Function (DUF1080) 346 571 2.2E-31 T 15-10-2018 IPR010496 Domain of unknown function DUF1080 Trad_1254 26b3696356cbbc973fd20768af2e01ba 581 Gene3D G3DSA:2.60.40.10 54 153 6.3E-7 T 15-10-2018 IPR013783 Immunoglobulin-like fold Trad_1314 02ad63082a5d22e3e252a5a8bb50be33 319 Gene3D G3DSA:3.90.1200.10 119 303 5.1E-10 T 15-10-2018 Trad_1314 02ad63082a5d22e3e252a5a8bb50be33 319 Pfam PF01636 Phosphotransferase enzyme family 69 276 4.1E-16 T 15-10-2018 IPR002575 Aminoglycoside phosphotransferase Trad_1314 02ad63082a5d22e3e252a5a8bb50be33 319 SUPERFAMILY SSF56112 76 288 1.33E-18 T 15-10-2018 IPR011009 Protein kinase-like domain superfamily Trad_1126 f7a289602a4cb64cad7433ba0735fc3f 280 Pfam PF02517 CAAX protease self-immunity 140 238 2.6E-12 T 15-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 Trad_2518 53d3e7eda538e45bfe42c2e1d60b4a31 264 Gene3D G3DSA:3.20.20.220 8 237 5.6E-17 T 15-10-2018 Trad_2518 53d3e7eda538e45bfe42c2e1d60b4a31 264 Pfam PF02219 Methylenetetrahydrofolate reductase 53 170 1.6E-9 T 15-10-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 Trad_2518 53d3e7eda538e45bfe42c2e1d60b4a31 264 SUPERFAMILY SSF51730 11 243 2.75E-36 T 15-10-2018 IPR029041 FAD-linked oxidoreductase-like Trad_0800 ba31ce7b1e921e892d234e39ff5fc603 98 Pfam PF02583 Metal-sensitive transcriptional repressor 19 91 3.7E-26 T 15-10-2018 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 Trad_0800 ba31ce7b1e921e892d234e39ff5fc603 98 Gene3D G3DSA:1.20.58.1000 3 97 1.3E-26 T 15-10-2018 IPR038390 Metal-sensitive transcriptional repressor superfamily Trad_2741 26694147fa17c06bc83d325cd894d5a3 253 SUPERFAMILY SSF75217 105 249 1.9E-35 T 15-10-2018 IPR029028 Alpha/beta knot methyltransferases Trad_2741 26694147fa17c06bc83d325cd894d5a3 253 Gene3D G3DSA:3.40.1280.10 101 252 3.4E-37 T 15-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Trad_2741 26694147fa17c06bc83d325cd894d5a3 253 Pfam PF00588 SpoU rRNA Methylase family 110 244 1.5E-28 T 15-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 Trad_1653 05e55fac850446c68eaca741efed9623 78 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 15-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Trad_1653 05e55fac850446c68eaca741efed9623 78 PRINTS PR00354 7Fe ferredoxin signature 19 29 1.1E-15 T 15-10-2018 IPR000813 7Fe ferredoxin GO:0009055 Trad_1653 05e55fac850446c68eaca741efed9623 78 PRINTS PR00354 7Fe ferredoxin signature 35 52 1.1E-15 T 15-10-2018 IPR000813 7Fe ferredoxin GO:0009055 Trad_1653 05e55fac850446c68eaca741efed9623 78 PRINTS PR00354 7Fe ferredoxin signature 9 19 1.1E-15 T 15-10-2018 IPR000813 7Fe ferredoxin GO:0009055 Trad_1653 05e55fac850446c68eaca741efed9623 78 SUPERFAMILY SSF54862 2 62 3.03E-21 T 15-10-2018 Trad_1653 05e55fac850446c68eaca741efed9623 78 Gene3D G3DSA:3.30.70.20 2 77 9.0E-34 T 15-10-2018 Trad_1653 05e55fac850446c68eaca741efed9623 78 Pfam PF00037 4Fe-4S binding domain 34 56 3.3E-9 T 15-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Trad_0804 33234e22fd26c3eff5ee3c73438c138a 296 Gene3D G3DSA:3.40.630.30 2 295 9.5E-18 T 15-10-2018 Trad_0804 33234e22fd26c3eff5ee3c73438c138a 296 SUPERFAMILY SSF55729 2 291 2.24E-11 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase Trad_1985 25a688f1789c2d65fd321e19d53c6d4d 524 SUPERFAMILY SSF54675 5 163 4.71E-34 T 15-10-2018 Trad_1985 25a688f1789c2d65fd321e19d53c6d4d 524 TIGRFAM TIGR01513 NAPRTase_put: nicotinate phosphoribosyltransferase 17 506 7.7E-132 T 15-10-2018 IPR006405 Nicotinate phosphoribosyltransferase pncB-type GO:0004516|GO:0019358 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264|Reactome: R-HSA-6798695 Trad_1985 25a688f1789c2d65fd321e19d53c6d4d 524 SUPERFAMILY SSF51690 158 519 1.44E-97 T 15-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 Trad_1985 25a688f1789c2d65fd321e19d53c6d4d 524 Gene3D G3DSA:3.20.20.70 170 356 2.4E-158 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Trad_1985 25a688f1789c2d65fd321e19d53c6d4d 524 PIRSF PIRSF000484 10 522 7.8E-130 T 15-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 Trad_1985 25a688f1789c2d65fd321e19d53c6d4d 524 Gene3D G3DSA:3.20.140.10 17 512 2.4E-158 T 15-10-2018 Trad_1617 930134e506908e2083d944c8ae73d637 257 Pfam PF03567 Sulfotransferase family 77 240 6.2E-14 T 15-10-2018 IPR005331 Sulfotransferase GO:0008146|GO:0016021 Trad_1617 930134e506908e2083d944c8ae73d637 257 SUPERFAMILY SSF52540 102 244 6.95E-10 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_0585 8b9af4469cfa7d448787750eb95bcd6f 260 SUPERFAMILY SSF52172 142 259 1.22E-30 T 15-10-2018 IPR011006 CheY-like superfamily Trad_0585 8b9af4469cfa7d448787750eb95bcd6f 260 SMART SM00448 13 127 0.074 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Trad_0585 8b9af4469cfa7d448787750eb95bcd6f 260 SMART SM00448 143 255 3.8E-32 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Trad_0585 8b9af4469cfa7d448787750eb95bcd6f 260 Pfam PF00072 Response regulator receiver domain 145 256 4.8E-23 T 15-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Trad_0585 8b9af4469cfa7d448787750eb95bcd6f 260 Gene3D G3DSA:3.40.50.2300 10 134 3.8E-10 T 15-10-2018 Trad_0585 8b9af4469cfa7d448787750eb95bcd6f 260 Gene3D G3DSA:3.40.50.2300 139 260 3.2E-28 T 15-10-2018 Trad_0585 8b9af4469cfa7d448787750eb95bcd6f 260 SUPERFAMILY SSF52172 12 133 3.27E-11 T 15-10-2018 IPR011006 CheY-like superfamily Trad_1216 9ff09c24b5c28401925104b4ba608556 41 SUPERFAMILY SSF143034 2 40 3.66E-9 T 15-10-2018 IPR037229 Ribosomal protein L35 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_1216 9ff09c24b5c28401925104b4ba608556 41 Gene3D G3DSA:2.40.50.530 1 41 7.8E-12 T 15-10-2018 Trad_1216 9ff09c24b5c28401925104b4ba608556 41 Pfam PF01632 Ribosomal protein L35 2 38 3.8E-8 T 15-10-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_0381 cf6d29c7031649c6ee9505a9f685db62 236 Pfam PF01955 Adenosylcobinamide amidohydrolase 37 226 2.3E-48 T 15-10-2018 IPR002808 Adenosylcobinamide amidohydrolase, CbiZ Trad_1067 f14894f61445b16312493d5ae5d0b910 120 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 116 5.4E-41 T 15-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_1067 f14894f61445b16312493d5ae5d0b910 120 SUPERFAMILY SSF64263 2 118 2.88E-43 T 15-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_1067 f14894f61445b16312493d5ae5d0b910 120 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 26.253 T 15-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_1067 f14894f61445b16312493d5ae5d0b910 120 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 15-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_1067 f14894f61445b16312493d5ae5d0b910 120 Gene3D G3DSA:3.90.1030.10 1 117 2.5E-45 T 15-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_1067 f14894f61445b16312493d5ae5d0b910 120 Pfam PF01196 Ribosomal protein L17 21 116 8.4E-35 T 15-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_1678 6ba600ee79868a2122f7d9c7ea5490f3 177 Pfam PF01899 Na+/H+ ion antiporter subunit 25 157 7.9E-28 T 15-10-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 Trad_1520 02d335acc15aa0ae130c3728c3ec5f50 312 SMART SM00880 22 287 2.3E-22 T 15-10-2018 IPR007899 CHAD domain Trad_1520 02d335acc15aa0ae130c3728c3ec5f50 312 Pfam PF05235 CHAD domain 33 252 1.4E-30 T 15-10-2018 IPR007899 CHAD domain Trad_1520 02d335acc15aa0ae130c3728c3ec5f50 312 Gene3D G3DSA:1.40.20.10 1 308 1.6E-23 T 15-10-2018 IPR038186 CHAD domain superfamily Trad_2277 f49559fb277193a534eaccd9e7462c9a 394 Gene3D G3DSA:3.40.50.1820 38 393 3.0E-143 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold Trad_2277 f49559fb277193a534eaccd9e7462c9a 394 TIGRFAM TIGR01392 homoserO_Ac_trn: homoserine O-acetyltransferase 43 390 1.6E-139 T 15-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 Trad_2277 f49559fb277193a534eaccd9e7462c9a 394 PIRSF PIRSF000443 19 394 9.1E-142 T 15-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 Trad_2277 f49559fb277193a534eaccd9e7462c9a 394 SUPERFAMILY SSF53474 41 392 1.97E-105 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold Trad_2277 f49559fb277193a534eaccd9e7462c9a 394 Hamap MF_00296 Homoserine O-acetyltransferase [metXA]. 32 391 33.359 T 15-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 Trad_2277 f49559fb277193a534eaccd9e7462c9a 394 Pfam PF00561 alpha/beta hydrolase fold 72 378 1.4E-38 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Trad_2162 31807f9e82cd5c2586f723b691cbe0a9 412 SUPERFAMILY SSF56601 18 395 4.9E-87 T 15-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Trad_2162 31807f9e82cd5c2586f723b691cbe0a9 412 Gene3D G3DSA:3.40.710.10 19 410 5.9E-131 T 15-10-2018 Trad_2162 31807f9e82cd5c2586f723b691cbe0a9 412 Pfam PF00144 Beta-lactamase 24 404 8.1E-66 T 15-10-2018 IPR001466 Beta-lactamase-related Trad_2689 9cc2db806e81c0a3139d7843abf9ab98 314 Gene3D G3DSA:3.40.50.1820 4 292 6.2E-48 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold Trad_2689 9cc2db806e81c0a3139d7843abf9ab98 314 SUPERFAMILY SSF53474 17 291 1.47E-34 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold Trad_2689 9cc2db806e81c0a3139d7843abf9ab98 314 Pfam PF00756 Putative esterase 31 287 1.3E-24 T 15-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 Trad_2889 d6d3e94ebb70d662a159df7601109a55 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 3.0E-47 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2889 d6d3e94ebb70d662a159df7601109a55 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 3.0E-47 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2889 d6d3e94ebb70d662a159df7601109a55 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 3.0E-47 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2889 d6d3e94ebb70d662a159df7601109a55 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 3.0E-47 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2889 d6d3e94ebb70d662a159df7601109a55 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 15 32 3.0E-47 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2889 d6d3e94ebb70d662a159df7601109a55 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 3.0E-47 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2889 d6d3e94ebb70d662a159df7601109a55 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 4.3E-13 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2889 d6d3e94ebb70d662a159df7601109a55 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 4.3E-13 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2889 d6d3e94ebb70d662a159df7601109a55 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 4.3E-13 T 15-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Trad_2889 d6d3e94ebb70d662a159df7601109a55 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 20 251 5.4E-69 T 15-10-2018 Trad_2889 d6d3e94ebb70d662a159df7601109a55 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 15-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Trad_2889 d6d3e94ebb70d662a159df7601109a55 253 Gene3D G3DSA:3.40.50.720 2 252 1.8E-85 T 15-10-2018 Trad_2889 d6d3e94ebb70d662a159df7601109a55 253 SUPERFAMILY SSF51735 9 252 3.17E-81 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_0711 a84e2ae286be87f14a34d62d6c170027 76 SUPERFAMILY SSF46689 1 68 3.94E-23 T 15-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Trad_0711 a84e2ae286be87f14a34d62d6c170027 76 Gene3D G3DSA:1.10.10.10 6 71 6.7E-19 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Trad_0711 a84e2ae286be87f14a34d62d6c170027 76 Pfam PF04255 Protein of unknown function (DUF433) 7 62 1.7E-25 T 15-10-2018 IPR007367 Protein of unknown function DUF433 Trad_2114 c0b998a47158b29338d827f80c843273 85 Pfam PF04226 Transglycosylase associated protein 33 83 5.8E-15 T 15-10-2018 IPR007341 Transglycosylase-associated protein GO:0016021 Trad_2761 077f6b28bad691662414aa1685bd5d2c 566 SUPERFAMILY SSF48208 259 442 1.02E-6 T 15-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 Trad_0844 6e52c3282b892f8720bbfa88992e6381 274 Gene3D G3DSA:1.10.3720.10 2 266 1.5E-49 T 15-10-2018 IPR035906 MetI-like superfamily Trad_0844 6e52c3282b892f8720bbfa88992e6381 274 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 95 268 8.2E-14 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Trad_0844 6e52c3282b892f8720bbfa88992e6381 274 SUPERFAMILY SSF161098 2 274 1.5E-59 T 15-10-2018 IPR035906 MetI-like superfamily Trad_2238 f796c35173704f9f6846e8cf8fecdf3e 395 Pfam PF04235 Protein of unknown function (DUF418) 229 386 3.5E-46 T 15-10-2018 IPR007349 Domain of unknown function DUF418 Trad_1869 90ef93e8c8a6b2d296162451a4d11407 387 Gene3D G3DSA:2.30.130.10 6 67 5.9E-7 T 15-10-2018 IPR036974 PUA domain superfamily GO:0003723 Trad_1869 90ef93e8c8a6b2d296162451a4d11407 387 Gene3D G3DSA:3.30.750.80 70 172 3.5E-13 T 15-10-2018 Trad_1869 90ef93e8c8a6b2d296162451a4d11407 387 SUPERFAMILY SSF53335 76 380 1.84E-64 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Trad_1869 90ef93e8c8a6b2d296162451a4d11407 387 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 156 337 2.0E-22 T 15-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 Trad_1869 90ef93e8c8a6b2d296162451a4d11407 387 Gene3D G3DSA:3.40.50.150 173 385 1.5E-69 T 15-10-2018 Trad_1538 e73f8ca4eb326dbee85df46417d9d152 506 Gene3D G3DSA:3.40.605.10 23 492 2.3E-164 T 15-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Trad_1538 e73f8ca4eb326dbee85df46417d9d152 506 Pfam PF00171 Aldehyde dehydrogenase family 30 493 1.1E-165 T 15-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Trad_1538 e73f8ca4eb326dbee85df46417d9d152 506 Gene3D G3DSA:3.40.309.10 266 464 2.3E-164 T 15-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Trad_1538 e73f8ca4eb326dbee85df46417d9d152 506 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 261 268 - T 15-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 Trad_1538 e73f8ca4eb326dbee85df46417d9d152 506 SUPERFAMILY SSF53720 13 498 2.36E-163 T 15-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Trad_1538 e73f8ca4eb326dbee85df46417d9d152 506 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 294 305 - T 15-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 Trad_0572 8ab4e84931fe1805b09fa21faf6eb4b2 336 Pfam PF02653 Branched-chain amino acid transport system / permease component 8 320 2.0E-30 T 15-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Trad_1056 269f88d8be6ff27f852f37c06d9b74dd 55 Pfam PF00327 Ribosomal protein L30p/L7e 2 50 2.2E-18 T 15-10-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain Trad_1056 269f88d8be6ff27f852f37c06d9b74dd 55 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 1 54 2.9E-26 T 15-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_1056 269f88d8be6ff27f852f37c06d9b74dd 55 Gene3D G3DSA:3.30.1390.20 1 54 2.2E-24 T 15-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily Trad_1056 269f88d8be6ff27f852f37c06d9b74dd 55 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 1 55 17.907 T 15-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_1056 269f88d8be6ff27f852f37c06d9b74dd 55 PIRSF PIRSF002211 1 55 1.2E-26 T 15-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Trad_1056 269f88d8be6ff27f852f37c06d9b74dd 55 SUPERFAMILY SSF55129 2 54 6.54E-19 T 15-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily Trad_1692 31edf48edbc14a9318493c44cfb6d323 113 SUPERFAMILY SSF51182 15 105 4.6E-19 T 15-10-2018 IPR011051 RmlC-like cupin domain superfamily Trad_1692 31edf48edbc14a9318493c44cfb6d323 113 Pfam PF07883 Cupin domain 39 90 1.4E-11 T 15-10-2018 IPR013096 Cupin 2, conserved barrel Trad_1692 31edf48edbc14a9318493c44cfb6d323 113 Gene3D G3DSA:2.60.120.10 4 106 1.6E-15 T 15-10-2018 IPR014710 RmlC-like jelly roll fold Trad_1499 3d1e3f19ea72d11322ca1e748f8c1a31 501 Pfam PF02652 L-lactate permease 2 498 4.4E-80 T 15-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 Trad_2360 ed455d326f7e94fbe7a9c82f33ec53df 656 SUPERFAMILY SSF56801 12 611 1.31E-116 T 15-10-2018 Trad_2360 ed455d326f7e94fbe7a9c82f33ec53df 656 ProSitePatterns PS00455 Putative AMP-binding domain signature. 194 205 - T 15-10-2018 IPR020845 AMP-binding, conserved site Trad_2360 ed455d326f7e94fbe7a9c82f33ec53df 656 Pfam PF00501 AMP-binding enzyme 20 478 2.6E-87 T 15-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Trad_2360 ed455d326f7e94fbe7a9c82f33ec53df 656 Gene3D G3DSA:3.40.50.12780 6 325 1.8E-53 T 15-10-2018 Trad_2360 ed455d326f7e94fbe7a9c82f33ec53df 656 Gene3D G3DSA:3.40.50.12780 327 470 2.4E-33 T 15-10-2018 Trad_0720 23a8ee55a985ffd962960d06ea5c99ad 315 SUPERFAMILY SSF161098 72 303 9.42E-60 T 15-10-2018 IPR035906 MetI-like superfamily Trad_0720 23a8ee55a985ffd962960d06ea5c99ad 315 Gene3D G3DSA:1.10.3720.10 68 314 1.4E-69 T 15-10-2018 IPR035906 MetI-like superfamily Trad_0720 23a8ee55a985ffd962960d06ea5c99ad 315 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 109 308 1.2E-16 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Trad_0781 0592b0e3600bc90c1af6018794e6faac 422 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 7 80 4.6E-24 T 15-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 Trad_0781 0592b0e3600bc90c1af6018794e6faac 422 Pfam PF07670 Nucleoside recognition 97 192 5.4E-7 T 15-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 Trad_0781 0592b0e3600bc90c1af6018794e6faac 422 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 3 421 1.8E-142 T 15-10-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 Trad_0781 0592b0e3600bc90c1af6018794e6faac 422 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 199 421 1.5E-71 T 15-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 Trad_1307 88fb6c196e4b46ec850836670c5af91e 270 SUPERFAMILY SSF53474 18 257 1.26E-34 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold Trad_1307 88fb6c196e4b46ec850836670c5af91e 270 Gene3D G3DSA:3.40.50.1820 9 259 1.1E-42 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold Trad_1307 88fb6c196e4b46ec850836670c5af91e 270 Pfam PF12146 Serine aminopeptidase, S33 25 251 5.0E-18 T 15-10-2018 IPR022742 Serine aminopeptidase, S33 Trad_1307 88fb6c196e4b46ec850836670c5af91e 270 PRINTS PR00111 Alpha/beta hydrolase fold signature 212 226 8.8E-7 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Trad_1307 88fb6c196e4b46ec850836670c5af91e 270 PRINTS PR00111 Alpha/beta hydrolase fold signature 95 108 8.8E-7 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Trad_1307 88fb6c196e4b46ec850836670c5af91e 270 PRINTS PR00111 Alpha/beta hydrolase fold signature 48 63 8.8E-7 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Trad_1307 88fb6c196e4b46ec850836670c5af91e 270 PIRSF PIRSF017388 9 255 9.4E-30 T 15-10-2018 IPR012354 Esterase/lipase GO:0052689 Trad_2179 e1332f13e6902875e87db38662d70066 444 Pfam PF11283 Protein of unknown function (DUF3084) 6 79 1.8E-22 T 15-10-2018 IPR021435 Protein of unknown function DUF3084 Trad_1513 75bbd9c04ff75705710674eb3b32967e 282 Pfam PF08241 Methyltransferase domain 69 163 2.4E-16 T 15-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 Trad_1513 75bbd9c04ff75705710674eb3b32967e 282 SUPERFAMILY SSF53335 15 282 3.19E-49 T 15-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Trad_1513 75bbd9c04ff75705710674eb3b32967e 282 Gene3D G3DSA:3.40.50.150 2 238 8.2E-50 T 15-10-2018 Trad_2690 11d38322fc53663461c45fe55fce6bb8 245 Pfam PF00756 Putative esterase 76 241 8.3E-11 T 15-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 Trad_2690 11d38322fc53663461c45fe55fce6bb8 245 SUPERFAMILY SSF53474 8 240 2.45E-19 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold Trad_2690 11d38322fc53663461c45fe55fce6bb8 245 Gene3D G3DSA:3.40.50.1820 2 245 6.5E-28 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold Trad_1152 344a76c64b6badda043e483f6e296e99 344 Pfam PF01032 FecCD transport family 30 339 2.0E-88 T 15-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 Trad_1152 344a76c64b6badda043e483f6e296e99 344 Gene3D G3DSA:1.10.3470.10 16 343 6.3E-90 T 15-10-2018 IPR037294 ABC transporter, BtuC-like Trad_1152 344a76c64b6badda043e483f6e296e99 344 SUPERFAMILY SSF81345 15 339 6.8E-79 T 15-10-2018 IPR037294 ABC transporter, BtuC-like Trad_1368 5aed3c479aec5772b77cdfa2271c200d 110 Pfam PF12647 RNHCP domain 11 93 1.3E-35 T 15-10-2018 IPR024439 RNHCP domain Trad_0562 eab80af29029172aa2b1bf66cb8a7dcd 227 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 15 222 4.3E-63 T 15-10-2018 IPR005744 Hly-III GO:0016021|GO:0019835 Trad_0562 eab80af29029172aa2b1bf66cb8a7dcd 227 Pfam PF03006 Haemolysin-III related 12 215 1.2E-48 T 15-10-2018 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 Trad_1689 78882384c430a773b382c31e324ed0ca 239 Pfam PF01048 Phosphorylase superfamily 16 205 1.5E-34 T 15-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 Trad_1689 78882384c430a773b382c31e324ed0ca 239 Gene3D G3DSA:3.40.50.1580 1 230 2.0E-66 T 15-10-2018 Trad_1689 78882384c430a773b382c31e324ed0ca 239 SUPERFAMILY SSF53167 4 229 3.01E-66 T 15-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 Trad_1953 91789be46395c311e39aec4bbc0e9b53 373 Pfam PF01594 AI-2E family transporter 34 351 1.0E-54 T 15-10-2018 IPR002549 Transmembrane protein TqsA-like Trad_0036 428eacd569bdb3d9965646759fa3bef4 289 Hamap MF_01408 Flavin-dependent thymidylate synthase [thyX]. 24 240 30.543 T 15-10-2018 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 Trad_0036 428eacd569bdb3d9965646759fa3bef4 289 Pfam PF02511 Thymidylate synthase complementing protein 30 226 2.1E-56 T 15-10-2018 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 Trad_0036 428eacd569bdb3d9965646759fa3bef4 289 SUPERFAMILY SSF69796 20 236 3.79E-69 T 15-10-2018 IPR036098 Thymidylate synthase ThyX superfamily GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 Trad_0036 428eacd569bdb3d9965646759fa3bef4 289 Gene3D G3DSA:3.30.1360.170 12 247 6.5E-76 T 15-10-2018 Trad_0036 428eacd569bdb3d9965646759fa3bef4 289 TIGRFAM TIGR02170 thyX: thymidylate synthase, flavin-dependent 28 232 5.5E-64 T 15-10-2018 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 Trad_0393 3b407113599ae02b7331b279c16f9917 494 SUPERFAMILY SSF53474 22 475 5.35E-75 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold Trad_0393 3b407113599ae02b7331b279c16f9917 494 Gene3D G3DSA:3.40.50.1820 23 232 1.1E-14 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold Trad_0393 3b407113599ae02b7331b279c16f9917 494 Pfam PF00450 Serine carboxypeptidase 66 452 9.7E-10 T 15-10-2018 IPR001563 Peptidase S10, serine carboxypeptidase GO:0004185|GO:0006508 Trad_1551 525e4243c2e319daae9f926ea298d939 148 Pfam PF14326 Domain of unknown function (DUF4384) 53 128 5.6E-11 T 15-10-2018 IPR025493 Domain of unknown function DUF4384 Trad_1882 ad37f287531260e7e6c26e426c163575 284 Pfam PF13228 Domain of unknown function (DUF4037) 144 226 7.1E-7 T 15-10-2018 IPR025117 Domain of unknown function DUF4037 Trad_1882 ad37f287531260e7e6c26e426c163575 284 Pfam PF01909 Nucleotidyltransferase domain 16 79 2.0E-8 T 15-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 Trad_1882 ad37f287531260e7e6c26e426c163575 284 Gene3D G3DSA:3.30.460.10 8 166 1.3E-9 T 15-10-2018 Trad_1882 ad37f287531260e7e6c26e426c163575 284 SUPERFAMILY SSF81301 10 70 1.81E-10 T 15-10-2018 Trad_1397 d3e6567e0fa686298663587a1ef3e4f3 96 SUPERFAMILY SSF47598 1 41 5.17E-6 T 15-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 Trad_1397 d3e6567e0fa686298663587a1ef3e4f3 96 Pfam PF01402 Ribbon-helix-helix protein, copG family 3 41 1.2E-9 T 15-10-2018 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 Trad_0717 4e3cbca76b5154e006229be1c41e29b7 313 SUPERFAMILY SSF46785 21 221 3.02E-22 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Trad_0717 4e3cbca76b5154e006229be1c41e29b7 313 Pfam PF12840 Helix-turn-helix domain 23 78 1.4E-9 T 15-10-2018 Trad_0717 4e3cbca76b5154e006229be1c41e29b7 313 SMART SM00418 23 97 7.2E-6 T 15-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Trad_0717 4e3cbca76b5154e006229be1c41e29b7 313 Gene3D G3DSA:1.10.10.10 12 98 1.3E-13 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Trad_2691 1ad94dac1987df69795ff5a10d740524 421 Gene3D G3DSA:3.30.1490.20 107 204 2.0E-6 T 15-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Trad_2691 1ad94dac1987df69795ff5a10d740524 421 SUPERFAMILY SSF56059 103 296 4.78E-10 T 15-10-2018 Trad_1128 0ba0cce538ccdcfbf33a8be7fef38b36 306 SUPERFAMILY SSF161098 91 290 2.78E-20 T 15-10-2018 IPR035906 MetI-like superfamily Trad_1128 0ba0cce538ccdcfbf33a8be7fef38b36 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 305 3.4E-41 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Trad_1128 0ba0cce538ccdcfbf33a8be7fef38b36 306 Gene3D G3DSA:1.10.3720.10 87 299 1.0E-24 T 15-10-2018 IPR035906 MetI-like superfamily Trad_2844 7c6da5c5cdf4300528658c8c324fce09 286 PIRSF PIRSF003097 1 284 1.1E-65 T 15-10-2018 IPR004513 Cell division protein FtsX GO:0016021 Trad_2844 7c6da5c5cdf4300528658c8c324fce09 286 Pfam PF02687 FtsX-like permease family 189 274 1.5E-7 T 15-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Trad_0851 74f08d7a4e9e86b0bc903acd11a1a34b 244 Gene3D G3DSA:3.30.70.260 154 244 1.0E-20 T 15-10-2018 Trad_0851 74f08d7a4e9e86b0bc903acd11a1a34b 244 PRINTS PR01837 MgtC/SapB protein signature 47 65 1.8E-43 T 15-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 Trad_0851 74f08d7a4e9e86b0bc903acd11a1a34b 244 PRINTS PR01837 MgtC/SapB protein signature 28 47 1.8E-43 T 15-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 Trad_0851 74f08d7a4e9e86b0bc903acd11a1a34b 244 PRINTS PR01837 MgtC/SapB protein signature 73 95 1.8E-43 T 15-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 Trad_0851 74f08d7a4e9e86b0bc903acd11a1a34b 244 PRINTS PR01837 MgtC/SapB protein signature 100 124 1.8E-43 T 15-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 Trad_0851 74f08d7a4e9e86b0bc903acd11a1a34b 244 Pfam PF02308 MgtC family 25 146 7.7E-38 T 15-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 Trad_0894 547893193f2ae7666b2cbe431d9996d9 258 Gene3D G3DSA:3.20.20.150 2 256 2.9E-64 T 15-10-2018 Trad_0894 547893193f2ae7666b2cbe431d9996d9 258 Pfam PF01261 Xylose isomerase-like TIM barrel 29 214 1.3E-18 T 15-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain Trad_0894 547893193f2ae7666b2cbe431d9996d9 258 SUPERFAMILY SSF51658 11 257 2.63E-42 T 15-10-2018 IPR036237 Xylose isomerase-like superfamily Trad_1682 7726acca22a2ad6fdbd08cd916705e57 261 Pfam PF04039 Domain related to MnhB subunit of Na+/H+ antiporter 109 219 1.5E-12 T 15-10-2018 IPR007182 Na+/H+ antiporter MnhB subunit-related protein Trad_2970 50cf8f1fd5887628142ba9cfd097cdcb 434 TIGRFAM TIGR00797 matE: MATE efflux family protein 20 411 3.5E-101 T 15-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Trad_2970 50cf8f1fd5887628142ba9cfd097cdcb 434 Pfam PF01554 MatE 20 180 1.0E-29 T 15-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Trad_2970 50cf8f1fd5887628142ba9cfd097cdcb 434 Pfam PF01554 MatE 252 395 1.1E-18 T 15-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Trad_2970 50cf8f1fd5887628142ba9cfd097cdcb 434 PIRSF PIRSF006603 5 434 4.0E-69 T 15-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Trad_2676 c38bbf2aa075c2f4d8418143368d19b0 160 Pfam PF01899 Na+/H+ ion antiporter subunit 7 158 2.5E-45 T 15-10-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 Trad_2676 c38bbf2aa075c2f4d8418143368d19b0 160 PIRSF PIRSF019239 1 160 3.6E-46 T 15-10-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 Trad_2357 39fb2aabc53d2d598b216f6e268e5559 399 Gene3D G3DSA:3.40.50.2300 29 343 1.4E-93 T 15-10-2018 Trad_2357 39fb2aabc53d2d598b216f6e268e5559 399 Pfam PF13458 Periplasmic binding protein 20 378 3.5E-52 T 15-10-2018 IPR028081 Leucine-binding protein domain Trad_2357 39fb2aabc53d2d598b216f6e268e5559 399 SUPERFAMILY SSF53822 19 383 3.33E-47 T 15-10-2018 IPR028082 Periplasmic binding protein-like I Trad_2357 39fb2aabc53d2d598b216f6e268e5559 399 Gene3D G3DSA:3.40.50.2300 137 278 1.4E-93 T 15-10-2018 Trad_2366 5df0ceb1ab9b9e0871215dfd9c476b42 201 Pfam PF04199 Putative cyclase 2 144 4.8E-16 T 15-10-2018 IPR007325 Kynurenine formamidase/cyclase-like GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 Trad_2366 5df0ceb1ab9b9e0871215dfd9c476b42 201 SUPERFAMILY SSF102198 1 200 4.19E-52 T 15-10-2018 IPR037175 Kynurenine formamidase superfamily GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 Trad_2366 5df0ceb1ab9b9e0871215dfd9c476b42 201 Hamap MF_01969 Kynurenine formamidase [kynB]. 1 201 38.271 T 15-10-2018 IPR017484 Kynurenine formamidase, bacteria GO:0004328|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 Trad_2366 5df0ceb1ab9b9e0871215dfd9c476b42 201 Gene3D G3DSA:3.50.30.50 1 201 2.4E-61 T 15-10-2018 IPR037175 Kynurenine formamidase superfamily GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 Trad_2154 0916aef0b11ff8bb8e0364b619d5ece3 147 Gene3D G3DSA:3.40.50.2300 4 143 2.2E-46 T 15-10-2018 Trad_2154 0916aef0b11ff8bb8e0364b619d5ece3 147 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 8 139 6.8E-23 T 15-10-2018 IPR023485 Phosphotyrosine protein phosphatase I Trad_2154 0916aef0b11ff8bb8e0364b619d5ece3 147 SMART SM00226 6 141 2.0E-47 T 15-10-2018 IPR023485 Phosphotyrosine protein phosphatase I Trad_2154 0916aef0b11ff8bb8e0364b619d5ece3 147 SUPERFAMILY SSF52788 6 140 1.44E-40 T 15-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily Trad_0730 66600ef9c22c172c4f9531881829c8b6 416 SUPERFAMILY SSF63829 17 255 2.35E-15 T 15-10-2018 Trad_0730 66600ef9c22c172c4f9531881829c8b6 416 Gene3D G3DSA:2.120.10.30 28 260 1.9E-13 T 15-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like Trad_1490 cdea9fb3353759b08331bbaeeaf40a28 324 SUPERFAMILY SSF52540 18 214 1.44E-5 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_1490 cdea9fb3353759b08331bbaeeaf40a28 324 Gene3D G3DSA:3.40.50.300 14 223 2.8E-7 T 15-10-2018 Trad_0668 cc3f1cec2f47e75cb13543ca1d36f58b 292 Gene3D G3DSA:3.40.50.300 1 275 1.5E-64 T 15-10-2018 Trad_0668 cc3f1cec2f47e75cb13543ca1d36f58b 292 Pfam PF00685 Sulfotransferase domain 3 183 2.7E-17 T 15-10-2018 IPR000863 Sulfotransferase domain GO:0008146 Trad_0668 cc3f1cec2f47e75cb13543ca1d36f58b 292 SUPERFAMILY SSF52540 2 271 4.32E-66 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_1163 5dad61162e422e1d6ee4a15c8e49c367 333 Gene3D G3DSA:3.40.50.1980 162 317 2.6E-43 T 15-10-2018 Trad_1163 5dad61162e422e1d6ee4a15c8e49c367 333 Pfam PF01497 Periplasmic binding protein 54 258 7.3E-22 T 15-10-2018 IPR002491 ABC transporter periplasmic binding domain Trad_1163 5dad61162e422e1d6ee4a15c8e49c367 333 SUPERFAMILY SSF53807 20 284 5.49E-51 T 15-10-2018 Trad_1163 5dad61162e422e1d6ee4a15c8e49c367 333 Gene3D G3DSA:3.40.50.1980 14 160 5.2E-42 T 15-10-2018 Trad_1657 d52175a79af718b897af9583172bb614 353 SUPERFAMILY SSF53098 1 330 1.97E-49 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily Trad_0872 d742ad530f87ee28cd15e8cb4f3da0f7 308 TIGRFAM TIGR04052 AZL_007920_fam: AZL_007920/MXAN_0976 family protein 61 290 4.8E-68 T 15-10-2018 IPR023977 Conserved hypotheical protein CHP04052 Trad_2764 4e4d1953cab211ac31240e721f4039d2 260 SUPERFAMILY SSF52317 28 238 3.74E-41 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like Trad_2764 4e4d1953cab211ac31240e721f4039d2 260 Pfam PF07722 Peptidase C26 22 216 9.6E-63 T 15-10-2018 IPR011697 Peptidase C26 GO:0016787 Reactome: R-HSA-6798695 Trad_2764 4e4d1953cab211ac31240e721f4039d2 260 Gene3D G3DSA:3.40.50.880 3 244 5.6E-73 T 15-10-2018 IPR029062 Class I glutamine amidotransferase-like Trad_1802 49cea05deed3d81949eb04c085810ad6 377 SUPERFAMILY SSF53383 3 372 5.38E-104 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Trad_1802 49cea05deed3d81949eb04c085810ad6 377 Pfam PF00266 Aminotransferase class-V 3 359 2.0E-83 T 15-10-2018 IPR000192 Aminotransferase class V domain Trad_1802 49cea05deed3d81949eb04c085810ad6 377 Gene3D G3DSA:3.40.640.10 14 253 5.9E-136 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Trad_1802 49cea05deed3d81949eb04c085810ad6 377 Gene3D G3DSA:3.90.1150.10 3 369 5.9E-136 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Trad_1802 49cea05deed3d81949eb04c085810ad6 377 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 190 209 - T 15-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site Trad_1802 49cea05deed3d81949eb04c085810ad6 377 PIRSF PIRSF005572 1 377 6.1E-124 T 15-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 Trad_0788 c12137beb5f6b393d00ba06d9e9fd719 392 Gene3D G3DSA:3.40.50.2000 220 368 5.6E-8 T 15-10-2018 Trad_0788 c12137beb5f6b393d00ba06d9e9fd719 392 SUPERFAMILY SSF53756 7 383 1.19E-24 T 15-10-2018 Trad_0788 c12137beb5f6b393d00ba06d9e9fd719 392 TIGRFAM TIGR03492 TIGR03492: conserved hypothetical protein 5 384 1.5E-78 T 15-10-2018 IPR019994 Conserved hypothetical protein CHP03492 Trad_1688 c8c48e84d59ec6f3c50968d550efe4be 128 Pfam PF03259 Roadblock/LC7 domain 13 86 2.7E-7 T 15-10-2018 IPR004942 Roadblock/LAMTOR2 domain Trad_1688 c8c48e84d59ec6f3c50968d550efe4be 128 SUPERFAMILY SSF103196 13 120 8.37E-11 T 15-10-2018 Trad_1688 c8c48e84d59ec6f3c50968d550efe4be 128 Gene3D G3DSA:3.30.450.30 11 122 6.8E-11 T 15-10-2018 Trad_2806 d492c5abf29c1c76594a0aebd83c5c7b 266 Pfam PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) 21 253 8.3E-57 T 15-10-2018 IPR019108 Cytochrome c oxidase caa3-type, assembly factor CtaG-related Trad_1134 b4e9007bdb66bdfd43960803e9505142 293 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 177 266 4.5E-7 T 15-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Trad_1134 b4e9007bdb66bdfd43960803e9505142 293 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 19 131 1.2E-10 T 15-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Trad_1134 b4e9007bdb66bdfd43960803e9505142 293 SUPERFAMILY SSF54593 172 289 1.88E-23 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Trad_1134 b4e9007bdb66bdfd43960803e9505142 293 Gene3D G3DSA:3.10.180.10 17 148 2.4E-28 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Trad_1134 b4e9007bdb66bdfd43960803e9505142 293 SUPERFAMILY SSF54593 10 175 5.21E-37 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Trad_1134 b4e9007bdb66bdfd43960803e9505142 293 Gene3D G3DSA:3.10.180.10 175 293 1.5E-23 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Trad_0719 c27ee770be5e5fc139bc1b3adcd89cb8 420 Pfam PF13416 Bacterial extracellular solute-binding protein 42 351 3.0E-29 T 15-10-2018 IPR006059 Bacterial extracellular solute-binding protein Trad_0719 c27ee770be5e5fc139bc1b3adcd89cb8 420 Gene3D G3DSA:3.40.190.10 22 418 1.4E-69 T 15-10-2018 Trad_0719 c27ee770be5e5fc139bc1b3adcd89cb8 420 SUPERFAMILY SSF53850 17 410 2.05E-58 T 15-10-2018 Trad_1767 06241fd3c095fc83e08b1bf0c4b5515e 324 SUPERFAMILY SSF52540 60 173 4.83E-12 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_1767 06241fd3c095fc83e08b1bf0c4b5515e 324 Gene3D G3DSA:3.40.50.300 6 186 3.0E-17 T 15-10-2018 Trad_1767 06241fd3c095fc83e08b1bf0c4b5515e 324 Pfam PF03969 AFG1-like ATPase 33 200 2.6E-34 T 15-10-2018 IPR005654 ATPase, AFG1-like GO:0005524 Trad_1767 06241fd3c095fc83e08b1bf0c4b5515e 324 Pfam PF03969 AFG1-like ATPase 222 321 4.2E-11 T 15-10-2018 IPR005654 ATPase, AFG1-like GO:0005524 Trad_0987 5d2ca5545bb72a020a02af88655fdbd9 71 SUPERFAMILY SSF143100 22 62 7.06E-9 T 15-10-2018 IPR035069 TTHA1013/TTHA0281-like Trad_0987 5d2ca5545bb72a020a02af88655fdbd9 71 Gene3D G3DSA:3.30.160.250 11 69 4.3E-7 T 15-10-2018 Trad_0877 3a262ef2578552305276169172d7c9b9 513 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 268 279 - T 15-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Trad_0877 3a262ef2578552305276169172d7c9b9 513 SUPERFAMILY SSF54862 178 283 6.07E-7 T 15-10-2018 Trad_2371 ce4c95d2802b92019e52ca46a60efc30 165 Pfam PF06695 Putative small multi-drug export protein 24 126 6.1E-9 T 15-10-2018 IPR009577 Putative small multi-drug export Trad_0018 4e412be0bffc5f87dd65f1b4892b371f 779 SUPERFAMILY SSF52540 4 464 1.55E-19 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_1990 0ad941d7e7687f4ec637a2267d71fc53 687 Pfam PF09972 Predicted membrane protein (DUF2207) 331 614 2.3E-31 T 15-10-2018 IPR018702 Protein of unknown function DUF2207, membrane Trad_1990 0ad941d7e7687f4ec637a2267d71fc53 687 Pfam PF09972 Predicted membrane protein (DUF2207) 32 208 2.4E-9 T 15-10-2018 IPR018702 Protein of unknown function DUF2207, membrane Trad_2553 839a18df8abc2e73123e151986330a86 483 Gene3D G3DSA:1.20.1730.10 8 479 8.9E-75 T 15-10-2018 IPR038377 Sodium/glucose symporter superfamily Trad_2553 839a18df8abc2e73123e151986330a86 483 Pfam PF00474 Sodium:solute symporter family 36 424 1.4E-50 T 15-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 Trad_2497 f5b16893229dfe19d114130035139db8 93 SUPERFAMILY SSF47413 5 70 2.25E-17 T 15-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Trad_2497 f5b16893229dfe19d114130035139db8 93 SMART SM00530 11 66 6.3E-15 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Trad_2497 f5b16893229dfe19d114130035139db8 93 Pfam PF01381 Helix-turn-helix 15 64 1.1E-13 T 15-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Trad_2497 f5b16893229dfe19d114130035139db8 93 Gene3D G3DSA:1.10.260.40 7 71 5.9E-23 T 15-10-2018 Trad_2559 c4ac155323a17395f227df03796b65ea 168 Pfam PF03061 Thioesterase superfamily 36 108 8.4E-15 T 15-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 Trad_2559 c4ac155323a17395f227df03796b65ea 168 SUPERFAMILY SSF54637 20 163 1.45E-40 T 15-10-2018 IPR029069 HotDog domain superfamily Trad_2559 c4ac155323a17395f227df03796b65ea 168 Gene3D G3DSA:3.10.129.10 7 166 3.0E-44 T 15-10-2018 Trad_0233 4b129356a10961e2dc8e51639e31ff65 128 Pfam PF13279 Thioesterase-like superfamily 9 120 1.2E-15 T 15-10-2018 Trad_0233 4b129356a10961e2dc8e51639e31ff65 128 SUPERFAMILY SSF54637 1 123 1.04E-31 T 15-10-2018 IPR029069 HotDog domain superfamily Trad_0233 4b129356a10961e2dc8e51639e31ff65 128 Gene3D G3DSA:3.10.129.10 1 124 3.6E-33 T 15-10-2018 Trad_0833 42e133adf7445f0d0db088cc77faed69 287 PIRSF PIRSF035875 2 284 1.3E-47 T 15-10-2018 IPR017039 Virulence factor BrkB Trad_0833 42e133adf7445f0d0db088cc77faed69 287 Pfam PF03631 Virulence factor BrkB 16 280 1.1E-45 T 15-10-2018 IPR017039 Virulence factor BrkB Trad_0514 68ef44ba271022c621a2969c9721691f 345 SUPERFAMILY SSF53474 189 267 8.71E-6 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold Trad_0373 1645599ca4cf558cd815378229196ccc 153 Gene3D G3DSA:3.40.140.10 5 152 9.8E-41 T 15-10-2018 Trad_0373 1645599ca4cf558cd815378229196ccc 153 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 13 105 9.2E-21 T 15-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain Trad_0373 1645599ca4cf558cd815378229196ccc 153 SUPERFAMILY SSF53927 11 153 3.9E-38 T 15-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 Trad_2709 507feb7e4a380b8f8d171414506f76dc 510 Pfam PF11028 Protein of unknown function (DUF2723) 56 199 4.5E-28 T 15-10-2018 IPR021280 Protein of unknown function DUF2723 Trad_0338 5d6c2a988e095073dba1934b58b78d4f 198 Pfam PF01936 NYN domain 37 188 7.7E-27 T 15-10-2018 IPR021139 NYN domain, limkain-b1-type Trad_0338 5d6c2a988e095073dba1934b58b78d4f 198 Gene3D G3DSA:3.40.50.1010 31 193 9.0E-42 T 15-10-2018 Trad_0672 ed897b6116cf2d06d431b326f2d8406b 508 SUPERFAMILY SSF56059 178 396 7.9E-6 T 15-10-2018 Trad_2287 360a2165983f77bb067088fdc48fc58a 605 Gene3D G3DSA:3.10.105.10 323 564 5.4E-37 T 15-10-2018 Trad_2287 360a2165983f77bb067088fdc48fc58a 605 SUPERFAMILY SSF53850 37 572 4.34E-66 T 15-10-2018 Trad_2287 360a2165983f77bb067088fdc48fc58a 605 Gene3D G3DSA:3.40.190.10 10 314 1.2E-33 T 15-10-2018 Trad_2287 360a2165983f77bb067088fdc48fc58a 605 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 108 502 6.7E-53 T 15-10-2018 IPR000914 Solute-binding protein family 5 domain Trad_2287 360a2165983f77bb067088fdc48fc58a 605 PIRSF PIRSF002741 1 574 2.0E-44 T 15-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Trad_1473 b8aea9c8129ae23d41f8f0654a799362 331 Pfam PF00535 Glycosyl transferase family 2 27 192 3.1E-23 T 15-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Trad_1473 b8aea9c8129ae23d41f8f0654a799362 331 Gene3D G3DSA:3.90.550.10 19 246 5.9E-41 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Trad_1473 b8aea9c8129ae23d41f8f0654a799362 331 SUPERFAMILY SSF53448 14 252 3.3E-44 T 15-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Trad_0242 22734b8518fd374b2d6923837ccc394b 452 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 35 423 1.1E-107 T 15-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 Trad_0242 22734b8518fd374b2d6923837ccc394b 452 Pfam PF02386 Cation transport protein 18 439 1.2E-59 T 15-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 Trad_0818 d4c669894aa1f5a92df17fca25dacec1 150 Pfam PF03780 Asp23 family, cell envelope-related function 31 145 3.6E-22 T 15-10-2018 IPR005531 Alkaline shock protein Asp23 Trad_2116 2aa2567c17cafe079cbfa37fbd897afa 186 PIRSF PIRSF028063 15 183 1.9E-12 T 15-10-2018 IPR014538 Uncharacterised conserved protein, topoisomerase zinc finger Trad_2116 2aa2567c17cafe079cbfa37fbd897afa 186 Pfam PF10881 Protein of unknown function (DUF2726) 50 172 6.8E-35 T 15-10-2018 IPR024402 Domain of unknown function DUF2726 Trad_2592 be41c44389a568079f3da3ac69123d5c 181 Gene3D G3DSA:1.20.1440.20 13 181 9.9E-59 T 15-10-2018 IPR023353 LemA-like domain superfamily Trad_2592 be41c44389a568079f3da3ac69123d5c 181 Pfam PF04011 LemA family 4 181 8.9E-62 T 15-10-2018 IPR007156 LemA Trad_2592 be41c44389a568079f3da3ac69123d5c 181 SUPERFAMILY SSF140478 24 169 1.07E-49 T 15-10-2018 IPR023353 LemA-like domain superfamily Trad_0938 d762878fa88964f3666084b7901fef9a 140 SUPERFAMILY SSF88723 7 123 2.44E-19 T 15-10-2018 IPR029060 PIN-like domain superfamily Trad_0938 d762878fa88964f3666084b7901fef9a 140 Gene3D G3DSA:3.40.50.1010 7 132 1.1E-8 T 15-10-2018 Trad_0938 d762878fa88964f3666084b7901fef9a 140 Pfam PF01850 PIN domain 7 125 3.0E-11 T 15-10-2018 IPR002716 PIN domain Trad_0153 86c6c6bd7df7cb71e52030e8eb9ac4dc 101 Gene3D G3DSA:3.20.20.100 26 99 2.8E-6 T 15-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Trad_0153 86c6c6bd7df7cb71e52030e8eb9ac4dc 101 SUPERFAMILY SSF51430 37 88 4.45E-6 T 15-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Trad_2204 7b4244462d6cf443cac60e618cef735d 201 Pfam PF12277 Protein of unknown function (DUF3618) 15 58 4.6E-11 T 15-10-2018 IPR022062 Protein of unknown function DUF3618 Trad_2811 0a9ebc7fdaea1866ea5f3c5fc2c62363 163 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 57 104 1.7E-8 T 15-10-2018 IPR001434 Domain of unknown function DUF11 Trad_2811 0a9ebc7fdaea1866ea5f3c5fc2c62363 163 Pfam PF01345 Domain of unknown function DUF11 56 113 2.1E-7 T 15-10-2018 IPR001434 Domain of unknown function DUF11 Trad_0178 f5b5ed340325edef7bd814bceb5d9ec2 257 Pfam PF01012 Electron transfer flavoprotein domain 31 207 2.9E-33 T 15-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 Trad_0178 f5b5ed340325edef7bd814bceb5d9ec2 257 PIRSF PIRSF000090 1 256 9.7E-70 T 15-10-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 Trad_0178 f5b5ed340325edef7bd814bceb5d9ec2 257 SMART SM00893 21 214 2.6E-43 T 15-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 Trad_0178 f5b5ed340325edef7bd814bceb5d9ec2 257 SUPERFAMILY SSF52402 1 250 6.05E-60 T 15-10-2018 Trad_0178 f5b5ed340325edef7bd814bceb5d9ec2 257 Gene3D G3DSA:3.40.50.620 1 255 1.1E-66 T 15-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Trad_2024 13969e4a79ba908496d80b5d67169773 113 Pfam PF16999 Vacuolar (H+)-ATPase G subunit 11 113 3.6E-10 T 15-10-2018 Trad_2156 7f0f2343d49ef651c9e801b47e7a88a6 160 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 10 135 2.0E-21 T 15-10-2018 IPR023485 Phosphotyrosine protein phosphatase I Trad_2156 7f0f2343d49ef651c9e801b47e7a88a6 160 SUPERFAMILY SSF52788 6 135 8.77E-36 T 15-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily Trad_2156 7f0f2343d49ef651c9e801b47e7a88a6 160 SMART SM00226 7 138 1.8E-33 T 15-10-2018 IPR023485 Phosphotyrosine protein phosphatase I Trad_2156 7f0f2343d49ef651c9e801b47e7a88a6 160 Gene3D G3DSA:3.40.50.2300 4 140 3.8E-39 T 15-10-2018 Trad_2045 f857c222e4a408a986e785c39e4eecce 114 Gene3D G3DSA:1.10.10.10 4 97 3.7E-22 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Trad_2045 f857c222e4a408a986e785c39e4eecce 114 SUPERFAMILY SSF46785 4 96 2.11E-14 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Trad_2045 f857c222e4a408a986e785c39e4eecce 114 Pfam PF13601 Winged helix DNA-binding domain 16 94 3.0E-24 T 15-10-2018 IPR027395 Winged helix DNA-binding domain Trad_1224 fbaad9eb5b4df02d5cff862e934c4803 275 PIRSF PIRSF001359 3 267 5.9E-48 T 15-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 Trad_1224 fbaad9eb5b4df02d5cff862e934c4803 275 Pfam PF01116 Fructose-bisphosphate aldolase class-II 9 262 6.4E-55 T 15-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 Trad_1224 fbaad9eb5b4df02d5cff862e934c4803 275 SUPERFAMILY SSF51569 6 262 1.28E-53 T 15-10-2018 Trad_1224 fbaad9eb5b4df02d5cff862e934c4803 275 Gene3D G3DSA:3.20.20.70 3 267 1.3E-57 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Trad_1731 78c041678f61a90afd643b33008680f0 276 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 91 269 9.6E-16 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Trad_1731 78c041678f61a90afd643b33008680f0 276 SUPERFAMILY SSF161098 3 275 7.85E-68 T 15-10-2018 IPR035906 MetI-like superfamily Trad_1731 78c041678f61a90afd643b33008680f0 276 Gene3D G3DSA:1.10.3720.10 1 267 1.8E-56 T 15-10-2018 IPR035906 MetI-like superfamily Trad_0181 aa22e46ba081f9f9fc6447cf96a7c5a3 507 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 233 250 - T 15-10-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 Trad_0181 aa22e46ba081f9f9fc6447cf96a7c5a3 507 Gene3D G3DSA:3.20.20.300 2 323 1.0E-119 T 15-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 Trad_0181 aa22e46ba081f9f9fc6447cf96a7c5a3 507 SUPERFAMILY SSF51445 5 320 1.26E-86 T 15-10-2018 IPR017853 Glycoside hydrolase superfamily Trad_0181 aa22e46ba081f9f9fc6447cf96a7c5a3 507 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 5 312 1.5E-82 T 15-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 Trad_0383 a7f7f9c7167b5874bf38384502c04819 301 SUPERFAMILY SSF53807 21 286 2.35E-65 T 15-10-2018 Trad_0383 a7f7f9c7167b5874bf38384502c04819 301 Gene3D G3DSA:3.40.50.1980 26 163 8.5E-32 T 15-10-2018 Trad_0383 a7f7f9c7167b5874bf38384502c04819 301 Pfam PF01497 Periplasmic binding protein 44 260 3.4E-34 T 15-10-2018 IPR002491 ABC transporter periplasmic binding domain Trad_0383 a7f7f9c7167b5874bf38384502c04819 301 Gene3D G3DSA:3.40.50.1980 164 286 3.1E-28 T 15-10-2018 Trad_2624 9c7d0cdc4ccfe0e52dc20ea6f5fd0b58 133 Pfam PF02627 Carboxymuconolactone decarboxylase family 36 119 7.7E-17 T 15-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 Trad_2624 9c7d0cdc4ccfe0e52dc20ea6f5fd0b58 133 SUPERFAMILY SSF69118 16 121 9.42E-28 T 15-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 Trad_2624 9c7d0cdc4ccfe0e52dc20ea6f5fd0b58 133 Gene3D G3DSA:1.20.1290.10 2 121 2.8E-30 T 15-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 Trad_1174 2d3a673a545fc99b86b5abd9059cb15d 157 Gene3D G3DSA:1.10.287.160 91 157 7.3E-6 T 15-10-2018 Trad_1174 2d3a673a545fc99b86b5abd9059cb15d 157 Pfam PF01047 MarR family 38 83 1.2E-6 T 15-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Trad_1174 2d3a673a545fc99b86b5abd9059cb15d 157 Gene3D G3DSA:1.10.10.10 2 90 1.4E-28 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Trad_1174 2d3a673a545fc99b86b5abd9059cb15d 157 SUPERFAMILY SSF46785 10 111 7.86E-14 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Trad_0576 6ee26b70bae48b119a50999f8c33cec0 81 SMART SM00834 1 41 0.0073 T 15-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain Trad_0602 440d73aaee08fb112912ca371e8b2f39 755 Pfam PF02653 Branched-chain amino acid transport system / permease component 274 432 2.1E-16 T 15-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Trad_0602 440d73aaee08fb112912ca371e8b2f39 755 Pfam PF02653 Branched-chain amino acid transport system / permease component 537 693 1.2E-21 T 15-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Trad_0009 9d10c907e4accc91942d57cfce0c4d9b 240 Pfam PF09335 SNARE associated Golgi protein 85 196 9.7E-17 T 15-10-2018 IPR032816 SNARE associated Golgi protein Trad_0489 10733afc7df03df73f3b0d6542fa5cd5 212 SUPERFAMILY SSF51735 2 211 9.36E-39 T 15-10-2018 IPR036291 NAD(P)-binding domain superfamily Trad_0489 10733afc7df03df73f3b0d6542fa5cd5 212 Gene3D G3DSA:3.40.50.720 2 211 2.0E-51 T 15-10-2018 Trad_0489 10733afc7df03df73f3b0d6542fa5cd5 212 Pfam PF13460 NAD(P)H-binding 7 199 2.6E-47 T 15-10-2018 IPR016040 NAD(P)-binding domain Trad_0524 909fa2a493613ecc7943fc2f94871746 502 Pfam PF13808 DDE_Tnp_1-associated 163 233 2.7E-15 T 15-10-2018 IPR032806 H repeat-associated protein, N-terminal Trad_1636 47bd982ed1aaae4e868b2efd3aff4dd8 283 Pfam PF04228 Putative neutral zinc metallopeptidase 1 278 4.1E-100 T 15-10-2018 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative Trad_0344 9421339d5b0d05ee924fec4a0e33c26a 145 Gene3D G3DSA:3.10.690.10 1 141 8.4E-39 T 15-10-2018 IPR036104 Bifunctional nuclease superfamily GO:0004518 Trad_0344 9421339d5b0d05ee924fec4a0e33c26a 145 Pfam PF02577 Bifunctional nuclease 11 136 3.6E-36 T 15-10-2018 IPR003729 Bifunctional nuclease domain GO:0004518 Trad_0344 9421339d5b0d05ee924fec4a0e33c26a 145 SUPERFAMILY SSF103256 9 136 4.05E-33 T 15-10-2018 IPR036104 Bifunctional nuclease superfamily GO:0004518 Trad_2855 d36ff6849d47c57e403370e2051a8c5d 536 Pfam PF13807 G-rich domain on putative tyrosine kinase 442 521 3.8E-9 T 15-10-2018 IPR032807 Tyrosine kinase, G-rich domain Trad_1209 f4a4479d8dd90b82b34b7635ee4610ef 259 SUPERFAMILY SSF51905 7 251 4.53E-18 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Trad_1209 f4a4479d8dd90b82b34b7635ee4610ef 259 Gene3D G3DSA:3.50.50.60 7 254 2.9E-83 T 15-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Trad_1209 f4a4479d8dd90b82b34b7635ee4610ef 259 Pfam PF01134 Glucose inhibited division protein A 11 189 1.4E-19 T 15-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 Trad_0979 e201e6c94b78b4adb83f76c5196f5c65 482 Pfam PF04932 O-Antigen ligase 231 341 4.4E-10 T 15-10-2018 IPR007016 O-antigen ligase-related Trad_1934 c36bc024b9e438331d70da06796a4e4d 458 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 60 451 2.1E-104 T 15-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 Trad_1934 c36bc024b9e438331d70da06796a4e4d 458 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 9 445 1.0E-99 T 15-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit Trad_1934 c36bc024b9e438331d70da06796a4e4d 458 PIRSF PIRSF006066 3 456 4.0E-71 T 15-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 Trad_1992 0a65ab5c39d90de0e6a9eec01fba68e5 143 Pfam PF04241 Protein of unknown function (DUF423) 37 118 1.6E-23 T 15-10-2018 IPR006696 Protein of unknown function DUF423 Trad_0994 7ccd2d760adab84f8bad879b08249792 322 Pfam PF02653 Branched-chain amino acid transport system / permease component 46 311 8.7E-44 T 15-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Trad_1832 680794ee3c9d2d9fbb09f8eb3538b7c2 337 PRINTS PR00069 Aldo-keto reductase signature 137 154 4.2E-6 T 15-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Trad_1832 680794ee3c9d2d9fbb09f8eb3538b7c2 337 PRINTS PR00069 Aldo-keto reductase signature 106 124 4.2E-6 T 15-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Trad_1832 680794ee3c9d2d9fbb09f8eb3538b7c2 337 SUPERFAMILY SSF51430 1 318 1.7E-109 T 15-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Trad_1832 680794ee3c9d2d9fbb09f8eb3538b7c2 337 Gene3D G3DSA:3.20.20.100 1 336 4.5E-134 T 15-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Trad_1832 680794ee3c9d2d9fbb09f8eb3538b7c2 337 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 137 154 - T 15-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 Trad_1832 680794ee3c9d2d9fbb09f8eb3538b7c2 337 Pfam PF00248 Aldo/keto reductase family 15 318 1.6E-83 T 15-10-2018 IPR023210 NADP-dependent oxidoreductase domain Trad_2138 f9013e2e41605fc26e323cfed20cd368 353 Gene3D G3DSA:3.20.20.70 1 350 9.4E-124 T 15-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Trad_2138 f9013e2e41605fc26e323cfed20cd368 353 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 3 336 2.4E-73 T 15-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 Trad_2138 f9013e2e41605fc26e323cfed20cd368 353 SUPERFAMILY SSF51395 2 343 5.64E-114 T 15-10-2018 Trad_2207 583307cb67f4b4c950993c1e0e4fe06c 128 Pfam PF17263 Family of unknown function (DUF5329) 31 123 4.5E-31 T 15-10-2018 IPR035242 Protein of unknown function DUF5329 Trad_2207 583307cb67f4b4c950993c1e0e4fe06c 128 ProDom PD031420 YFEK EXPORTED PRECURSOR SIGNAL PERIPLASMIC ECS3291 XCC0326 26 105 8.0E-17 T 15-10-2018 IPR035242 Protein of unknown function DUF5329 Trad_1997 ce1260920ae64e47a8b5a939f23c9ce0 365 Pfam PF04168 A predicted alpha-helical domain with a conserved ER motif. 1 313 6.0E-91 T 15-10-2018 IPR007296 Domain of unknown function DUF403 Trad_2955 a0988ef4b7cb3c9d3e4c9cb822decf32 360 Gene3D G3DSA:2.60.450.10 177 308 4.4E-9 T 15-10-2018 Trad_1271 83b9ed24c79cfccb27502fee996b7556 140 Pfam PF14108 Domain of unknown function (DUF4281) 5 124 9.7E-27 T 15-10-2018 IPR025461 ABA DEFICIENT 4-like Trad_0874 72e76ef2b4a25eb23584c72512178223 156 Gene3D G3DSA:2.60.40.1220 26 154 1.3E-17 T 15-10-2018 Trad_0874 72e76ef2b4a25eb23584c72512178223 156 SUPERFAMILY SSF81296 101 154 5.53E-6 T 15-10-2018 IPR014756 Immunoglobulin E-set Trad_0874 72e76ef2b4a25eb23584c72512178223 156 Pfam PF04234 CopC domain 27 154 4.9E-18 T 15-10-2018 IPR007348 CopC domain GO:0005507|GO:0042597|GO:0046688 Trad_0874 72e76ef2b4a25eb23584c72512178223 156 SUPERFAMILY SSF81296 26 66 1.05E-6 T 15-10-2018 IPR014756 Immunoglobulin E-set Trad_0059 00fd08ec5352708f9aa31fa7ee28158f 210 SUPERFAMILY SSF55729 5 187 8.41E-18 T 15-10-2018 IPR016181 Acyl-CoA N-acyltransferase Trad_0059 00fd08ec5352708f9aa31fa7ee28158f 210 Pfam PF00583 Acetyltransferase (GNAT) family 18 137 5.9E-11 T 15-10-2018 IPR000182 GNAT domain Trad_0059 00fd08ec5352708f9aa31fa7ee28158f 210 Gene3D G3DSA:3.40.630.30 1 208 1.6E-45 T 15-10-2018 Trad_0703 6105c7eb0718ec8f208f5bc64f3b7303 59 Pfam PF07043 Protein of unknown function (DUF1328) 8 46 3.1E-10 T 15-10-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 Trad_0703 6105c7eb0718ec8f208f5bc64f3b7303 59 PIRSF PIRSF036466 3 56 4.9E-13 T 15-10-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 Trad_0703 6105c7eb0718ec8f208f5bc64f3b7303 59 Hamap MF_01361 UPF0391 membrane protein YtjA [ytjA]. 3 51 15.455 T 15-10-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 Trad_0347 1179f6aa93249d5fc544e3d0f50026fd 127 Pfam PF01475 Ferric uptake regulator family 20 90 5.0E-6 T 15-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 Trad_0347 1179f6aa93249d5fc544e3d0f50026fd 127 SUPERFAMILY SSF46785 9 119 2.38E-11 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Trad_0347 1179f6aa93249d5fc544e3d0f50026fd 127 Gene3D G3DSA:3.30.1490.190 64 125 1.5E-6 T 15-10-2018 Trad_1707 79e9cbb32baa8ff1ea90ef40e533250b 211 SUPERFAMILY SSF56300 2 209 1.44E-26 T 15-10-2018 Trad_1707 79e9cbb32baa8ff1ea90ef40e533250b 211 Gene3D G3DSA:3.60.21.10 45 201 7.3E-7 T 15-10-2018 IPR029052 Metallo-dependent phosphatase-like Trad_2977 3e078b127dd9b95508f3aafe4a3b20ed 110 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 6 110 18.906 T 15-10-2018 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 Trad_2977 3e078b127dd9b95508f3aafe4a3b20ed 110 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 11 105 2.3E-21 T 15-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like Trad_1870 56d1917d732982b320fd2dd46baabe5c 282 Gene3D G3DSA:3.40.50.1820 3 279 2.0E-81 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold Trad_1870 56d1917d732982b320fd2dd46baabe5c 282 SUPERFAMILY SSF53474 7 277 1.86E-51 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold Trad_1870 56d1917d732982b320fd2dd46baabe5c 282 Pfam PF12146 Serine aminopeptidase, S33 27 260 3.2E-83 T 15-10-2018 IPR022742 Serine aminopeptidase, S33 Trad_1870 56d1917d732982b320fd2dd46baabe5c 282 PRINTS PR00111 Alpha/beta hydrolase fold signature 119 132 7.4E-11 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Trad_1870 56d1917d732982b320fd2dd46baabe5c 282 PRINTS PR00111 Alpha/beta hydrolase fold signature 105 118 7.4E-11 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Trad_1870 56d1917d732982b320fd2dd46baabe5c 282 PRINTS PR00111 Alpha/beta hydrolase fold signature 56 71 7.4E-11 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Trad_1870 56d1917d732982b320fd2dd46baabe5c 282 PRINTS PR00111 Alpha/beta hydrolase fold signature 217 231 7.4E-11 T 15-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Trad_0891 d1de15f96c0a95f546396eaf54e1e0ce 297 Gene3D G3DSA:1.10.357.140 19 173 1.8E-17 T 15-10-2018 Trad_0891 d1de15f96c0a95f546396eaf54e1e0ce 297 Pfam PF01040 UbiA prenyltransferase family 34 249 2.7E-16 T 15-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 Trad_2320 18ae79023ef5eb200471ba743c8737fd 429 Pfam PF16822 SGNH hydrolase-like domain, acetyltransferase AlgX 52 308 2.3E-71 T 15-10-2018 IPR031811 AlgX/AlgJ, SGNH hydrolase-like domain Trad_2717 9fac67064807383220773862f379c4cc 1069 Pfam PF04465 Protein of unknown function (DUF499) 295 528 4.3E-30 T 15-10-2018 IPR007555 Protein of unknown function DUF499 Trad_1297 308ef5806c5c9ede56cfcb9b62a46789 304 Pfam PF03547 Membrane transport protein 156 290 1.6E-14 T 15-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 Trad_1297 308ef5806c5c9ede56cfcb9b62a46789 304 Pfam PF03547 Membrane transport protein 9 137 8.2E-8 T 15-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 Trad_2863 d17180578d8156c8ee3eb88575d63b58 625 Pfam PF04932 O-Antigen ligase 398 536 9.1E-15 T 15-10-2018 IPR007016 O-antigen ligase-related Trad_0892 3d20b1d8b3ee1129ba54017d48284521 473 SUPERFAMILY SSF53649 3 412 7.52E-70 T 15-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 Trad_0892 3d20b1d8b3ee1129ba54017d48284521 473 Gene3D G3DSA:3.40.720.10 1 272 6.6E-34 T 15-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 Trad_0892 3d20b1d8b3ee1129ba54017d48284521 473 Gene3D G3DSA:3.30.1360.110 286 349 6.1E-6 T 15-10-2018 IPR023116 Phosphonoacetate hydrolase, insert domain superfamily KEGG: 00440+3.11.1.2 Trad_0892 3d20b1d8b3ee1129ba54017d48284521 473 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 9 373 5.2E-52 T 15-10-2018 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 Trad_0340 eeaf4d2e226d0d240d7cc6c618444c05 116 Pfam PF01638 HxlR-like helix-turn-helix 20 108 3.7E-34 T 15-10-2018 IPR002577 Helix-turn-helix, HxlR type Trad_0340 eeaf4d2e226d0d240d7cc6c618444c05 116 Gene3D G3DSA:1.10.10.10 4 115 3.8E-39 T 15-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Trad_0340 eeaf4d2e226d0d240d7cc6c618444c05 116 SUPERFAMILY SSF46785 9 111 1.7E-34 T 15-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Trad_2158 2f61e782d73f44a3fbe65e9749674c4c 281 Gene3D G3DSA:3.20.20.150 1 279 1.6E-57 T 15-10-2018 Trad_2158 2f61e782d73f44a3fbe65e9749674c4c 281 Pfam PF01261 Xylose isomerase-like TIM barrel 25 213 3.5E-22 T 15-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain Trad_2158 2f61e782d73f44a3fbe65e9749674c4c 281 SUPERFAMILY SSF51658 1 255 2.9E-47 T 15-10-2018 IPR036237 Xylose isomerase-like superfamily Trad_1480 b1072ca55e8e0804db7dfd50f221ec25 193 SUPERFAMILY SSF52218 8 180 3.19E-19 T 15-10-2018 IPR029039 Flavoprotein-like superfamily Trad_1480 b1072ca55e8e0804db7dfd50f221ec25 193 Pfam PF12724 Flavodoxin domain 10 150 7.9E-28 T 15-10-2018 IPR026816 Flavodoxin domain Trad_1480 b1072ca55e8e0804db7dfd50f221ec25 193 Gene3D G3DSA:3.40.50.360 9 138 3.5E-13 T 15-10-2018 IPR029039 Flavoprotein-like superfamily Trad_1480 b1072ca55e8e0804db7dfd50f221ec25 193 ProSitePatterns PS00201 Flavodoxin signature. 11 27 - T 15-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 Trad_1514 bad12d2466823e5746fc253a438f8d75 315 SUPERFAMILY SSF51556 9 307 3.04E-21 T 15-10-2018 IPR032466 Metal-dependent hydrolase Trad_1514 bad12d2466823e5746fc253a438f8d75 315 Gene3D G3DSA:3.20.20.140 8 308 6.7E-37 T 15-10-2018 Trad_1514 bad12d2466823e5746fc253a438f8d75 315 Pfam PF04909 Amidohydrolase 50 307 1.7E-13 T 15-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Trad_1414 b2d1204f3ab2138e77815a5ddc67e75e 382 SUPERFAMILY SSF53383 18 380 1.04E-79 T 15-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Trad_1414 b2d1204f3ab2138e77815a5ddc67e75e 382 Gene3D G3DSA:3.40.640.10 55 276 2.2E-93 T 15-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Trad_1414 b2d1204f3ab2138e77815a5ddc67e75e 382 Pfam PF00155 Aminotransferase class I and II 21 376 1.6E-33 T 15-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Trad_1414 b2d1204f3ab2138e77815a5ddc67e75e 382 Gene3D G3DSA:3.90.1150.10 18 379 2.2E-93 T 15-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Trad_2542 4c92ff318d7d598c9f9159f22296daaa 84 Pfam PF11272 Protein of unknown function (DUF3072) 19 74 1.4E-29 T 15-10-2018 IPR021425 Protein of unknown function DUF3072 Trad_0534 c13a7f1d2195cd40e701bc395ed97c7e 119 Pfam PF07784 Protein of unknown function (DUF1622) 27 104 6.7E-27 T 15-10-2018 IPR012427 Protein of unknown function DUF1622 Trad_2335 e2b8828bc4b149c3322b0825e209086a 77 Gene3D G3DSA:3.30.70.100 5 73 2.7E-5 T 15-10-2018 Trad_1763 54213c6aedf31472a9cf8887be486fc7 121 Pfam PF04892 VanZ like family 7 110 1.1E-14 T 15-10-2018 IPR006976 VanZ-like Trad_2445 aa67d8581fdea8f27f8a8e6ff3602a34 165 Pfam PF14328 Domain of unknown function (DUF4385) 5 158 7.4E-66 T 15-10-2018 IPR025494 Protein of unknown function DUF4385 Trad_2526 00c2810fcbf7c3c2f6a4de267da919d6 81 SUPERFAMILY SSF54593 3 75 5.8E-6 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Trad_2526 00c2810fcbf7c3c2f6a4de267da919d6 81 Gene3D G3DSA:3.10.180.10 1 79 4.3E-6 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Trad_1594 bd9672c1424bcbb22d3262a449419246 330 Pfam PF09557 Domain of unknown function (DUF2382) 145 255 8.0E-24 T 15-10-2018 IPR019060 Domain of unknown function DUF2382 Trad_0420 7f65b1199897d06ef45178631e6d5d72 235 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 8 213 2.2E-57 T 15-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 Trad_1829 a18dd4daab95d0f3b7da6f12b6901c38 294 Gene3D G3DSA:1.10.3720.10 49 286 3.4E-54 T 15-10-2018 IPR035906 MetI-like superfamily Trad_1829 a18dd4daab95d0f3b7da6f12b6901c38 294 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 110 282 2.9E-13 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Trad_1829 a18dd4daab95d0f3b7da6f12b6901c38 294 SUPERFAMILY SSF161098 53 278 5.45E-48 T 15-10-2018 IPR035906 MetI-like superfamily Trad_2632 f40b5ed684f7b8b808537e85dabf0bc2 194 Pfam PF08534 Redoxin 7 154 2.1E-24 T 15-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 Trad_2632 f40b5ed684f7b8b808537e85dabf0bc2 194 SUPERFAMILY SSF52833 2 185 9.64E-49 T 15-10-2018 IPR036249 Thioredoxin-like superfamily Trad_2632 f40b5ed684f7b8b808537e85dabf0bc2 194 Gene3D G3DSA:3.40.30.10 2 189 5.6E-51 T 15-10-2018 Trad_2132 026c506a8d104f84df2423cd6df2a2ae 249 Pfam PF01925 Sulfite exporter TauE/SafE 2 227 8.1E-33 T 15-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 Trad_1634 42df49a06e9423432862b6798d963e8a 187 Pfam PF12724 Flavodoxin domain 17 145 1.2E-20 T 15-10-2018 IPR026816 Flavodoxin domain Trad_1634 42df49a06e9423432862b6798d963e8a 187 SUPERFAMILY SSF52218 16 167 5.59E-11 T 15-10-2018 IPR029039 Flavoprotein-like superfamily Trad_1634 42df49a06e9423432862b6798d963e8a 187 Gene3D G3DSA:3.40.50.360 16 144 1.4E-11 T 15-10-2018 IPR029039 Flavoprotein-like superfamily Trad_1141 adf5d245606899e5f9cf041d9aca8fa0 330 Pfam PF02653 Branched-chain amino acid transport system / permease component 54 317 6.1E-47 T 15-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Trad_2716 e6679a01ec169150f74a06385c620298 130 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 2 128 9.719 T 15-10-2018 IPR022907 VapC family GO:0004540 Trad_2716 e6679a01ec169150f74a06385c620298 130 Pfam PF01850 PIN domain 4 121 2.0E-13 T 15-10-2018 IPR002716 PIN domain Trad_2716 e6679a01ec169150f74a06385c620298 130 Gene3D G3DSA:3.40.50.1010 4 125 7.5E-12 T 15-10-2018 Trad_2716 e6679a01ec169150f74a06385c620298 130 SUPERFAMILY SSF88723 3 124 7.01E-15 T 15-10-2018 IPR029060 PIN-like domain superfamily Trad_1941 1ef1adb71255dcb9897ad21b5d5b70b4 376 Gene3D G3DSA:1.20.1250.20 10 370 4.0E-29 T 15-10-2018 Trad_1941 1ef1adb71255dcb9897ad21b5d5b70b4 376 SUPERFAMILY SSF103473 21 370 3.01E-34 T 15-10-2018 IPR036259 MFS transporter superfamily Trad_1941 1ef1adb71255dcb9897ad21b5d5b70b4 376 Pfam PF06779 Uncharacterised MFS-type transporter YbfB 21 363 2.3E-47 T 15-10-2018 IPR010645 Uncharacterised MFS-type transporter YbfB Trad_1433 97dedb3ee54d6507211b42cc83c95edb 89 Pfam PF10823 Protein of unknown function (DUF2568) 11 50 1.6E-8 T 15-10-2018 IPR021214 Protein of unknown function DUF2568 Trad_2383 c1563a445fd012948f1311c228955542 243 Pfam PF01618 MotA/TolQ/ExbB proton channel family 68 186 7.2E-32 T 15-10-2018 IPR002898 MotA/TolQ/ExbB proton channel Trad_0923 773b99fa081521552831aaa36e511557 615 Gene3D G3DSA:1.10.3720.10 408 610 2.2E-16 T 15-10-2018 IPR035906 MetI-like superfamily Trad_0923 773b99fa081521552831aaa36e511557 615 SUPERFAMILY SSF161098 410 597 2.35E-20 T 15-10-2018 IPR035906 MetI-like superfamily Trad_0923 773b99fa081521552831aaa36e511557 615 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 429 612 6.0E-18 T 15-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Trad_1815 eca85e421f2426d85e7002e3800c0a39 379 Pfam PF08308 PEGA domain 163 228 2.8E-10 T 15-10-2018 IPR013229 PEGA Trad_1815 eca85e421f2426d85e7002e3800c0a39 379 Pfam PF08308 PEGA domain 235 287 4.5E-8 T 15-10-2018 IPR013229 PEGA Trad_1815 eca85e421f2426d85e7002e3800c0a39 379 Gene3D G3DSA:2.60.40.1120 165 230 2.6E-6 T 15-10-2018 Trad_0535 0cb8424352f80226d81d474744ab5dba 186 Pfam PF11303 Protein of unknown function (DUF3105) 70 180 1.2E-24 T 15-10-2018 IPR021454 Protein of unknown function DUF3105 Trad_1430 e37643dd5f9c0f06e93130140f1956f2 86 Pfam PF13711 Domain of unknown function (DUF4160) 9 71 2.3E-23 T 15-10-2018 IPR025427 Protein of unknown function DUF4160 Trad_1218 8f9cc9798ba6b12f067fd2079186c3d2 395 Pfam PF09949 Uncharacterized conserved protein (DUF2183) 219 316 4.7E-32 T 15-10-2018 IPR019236 Domain of unknown function DUF2183 Trad_1663 2085de0334351c366d1513fc363cca84 413 TIGRFAM TIGR01894 cas_TM1795_cmr1: CRISPR type III-B/RAMP module RAMP protein Cmr1 25 83 3.1E-11 T 15-10-2018 IPR007522 CRISPR-associated protein TM1795 Trad_1663 2085de0334351c366d1513fc363cca84 413 Pfam PF03787 RAMP superfamily 25 206 6.1E-17 T 15-10-2018 IPR005537 CRISPR type III-associated RAMP protein Trad_0128 e91c9756cbbd1d86e7f40a19d18446fb 506 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 20 440 1.0E-149 T 15-10-2018 IPR002823 Protein of unknown function DUF112, transmembrane Trad_2474 675eda407bd6ca50f21b9ec9df9849ee 130 SUPERFAMILY SSF53098 2 113 4.05E-9 T 15-10-2018 IPR012337 Ribonuclease H-like superfamily Trad_1760 b5ad54fd026940ab7acff42504ccd8e8 313 Pfam PF01186 Lysyl oxidase 163 303 6.1E-16 T 15-10-2018 IPR001695 Lysyl oxidase GO:0005507|GO:0016641|GO:0055114 Reactome: R-HSA-1566948|Reactome: R-HSA-2243919 Trad_2123 bd6256359c0b0b7e3c662b797d74a1da 510 Pfam PF04932 O-Antigen ligase 251 435 2.0E-11 T 15-10-2018 IPR007016 O-antigen ligase-related Trad_2084 46b510cfa833c6cc8095f912cdf58101 191 Pfam PF03713 Domain of unknown function (DUF305) 51 184 2.4E-32 T 15-10-2018 IPR005183 Domain of unknown function DUF305 Trad_2084 46b510cfa833c6cc8095f912cdf58101 191 Gene3D G3DSA:1.20.1260.10 47 190 5.6E-40 T 15-10-2018 IPR012347 Ferritin-like Trad_2500 126fc5beb8edc1ca31af5e502daad7b4 336 Gene3D G3DSA:1.10.101.10 44 112 4.4E-22 T 15-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 Trad_2500 126fc5beb8edc1ca31af5e502daad7b4 336 Gene3D G3DSA:1.10.101.10 113 180 1.6E-24 T 15-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 Trad_2500 126fc5beb8edc1ca31af5e502daad7b4 336 SUPERFAMILY SSF47090 44 112 1.6E-18 T 15-10-2018 IPR036365 PGBD-like superfamily Trad_2500 126fc5beb8edc1ca31af5e502daad7b4 336 SUPERFAMILY SSF47090 114 177 1.81E-19 T 15-10-2018 IPR036365 PGBD-like superfamily Trad_2500 126fc5beb8edc1ca31af5e502daad7b4 336 Pfam PF01471 Putative peptidoglycan binding domain 121 176 2.4E-16 T 15-10-2018 IPR002477 Peptidoglycan binding-like Trad_2500 126fc5beb8edc1ca31af5e502daad7b4 336 Pfam PF01471 Putative peptidoglycan binding domain 60 111 3.1E-14 T 15-10-2018 IPR002477 Peptidoglycan binding-like Trad_1966 29591b8d49c9aa272712c901dc7c1553 248 Pfam PF01988 VIT family 30 239 3.1E-51 T 15-10-2018 IPR008217 Ccc1 family Trad_0738 11e725aa549ac0cf8207db53ff28d188 522 Pfam PF13440 Polysaccharide biosynthesis protein 52 348 2.5E-69 T 15-10-2018 Trad_0234 c4a8019f6c71d15e5a35888f34dd8d75 133 Gene3D G3DSA:3.10.129.10 1 130 1.2E-38 T 15-10-2018 Trad_0234 c4a8019f6c71d15e5a35888f34dd8d75 133 Pfam PF13279 Thioesterase-like superfamily 10 125 1.8E-19 T 15-10-2018 Trad_0234 c4a8019f6c71d15e5a35888f34dd8d75 133 SUPERFAMILY SSF54637 2 128 6.62E-37 T 15-10-2018 IPR029069 HotDog domain superfamily Trad_0382 44b7bd369f2ce99d94e93e853eb442f8 241 Pfam PF02654 Cobalamin-5-phosphate synthase 8 236 1.3E-40 T 15-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 Trad_0382 44b7bd369f2ce99d94e93e853eb442f8 241 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 241 36.907 T 15-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 Trad_0263 051c602f1063bf84a34d1dbf6d58f6f8 73 Pfam PF09720 Putative addiction module component 13 65 3.7E-13 T 15-10-2018 IPR013406 Conserved hypothetical protein CHP02574, addiction module Trad_1708 87f36e667c069d0bd7ad9572a785fe09 303 SUPERFAMILY SSF110849 47 142 5.76E-10 T 15-10-2018 IPR036086 ParB/Sulfiredoxin superfamily Trad_1708 87f36e667c069d0bd7ad9572a785fe09 303 Pfam PF13224 Domain of unknown function (DUF4032) 207 278 3.8E-5 T 15-10-2018 IPR025111 Domain of unknown function DUF4032 Trad_2269 14f40a33800d85848401df9f53189f2e 322 Gene3D G3DSA:3.20.20.100 1 320 1.0E-79 T 15-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Trad_2269 14f40a33800d85848401df9f53189f2e 322 SUPERFAMILY SSF51430 1 315 1.14E-71 T 15-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Trad_2269 14f40a33800d85848401df9f53189f2e 322 Pfam PF00248 Aldo/keto reductase family 15 312 9.2E-53 T 15-10-2018 IPR023210 NADP-dependent oxidoreductase domain Trad_0436 8339ec6f8a22edcd1dee2c0a3ddfb535 220 Pfam PF05036 Sporulation related domain 21 84 1.0E-11 T 15-10-2018 IPR007730 Sporulation-like domain GO:0042834 Trad_0436 8339ec6f8a22edcd1dee2c0a3ddfb535 220 SUPERFAMILY SSF110997 20 93 1.31E-12 T 15-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 Trad_0436 8339ec6f8a22edcd1dee2c0a3ddfb535 220 Gene3D G3DSA:3.30.70.1070 22 93 2.2E-6 T 15-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 Trad_0426 d79de17d50e1e8e74712cfa98b0e095c 64 SUPERFAMILY SSF54786 7 61 3.57E-9 T 15-10-2018 Trad_0426 d79de17d50e1e8e74712cfa98b0e095c 64 Gene3D G3DSA:3.30.920.30 5 61 1.7E-6 T 15-10-2018 IPR038570 HicA superfamily Trad_0426 d79de17d50e1e8e74712cfa98b0e095c 64 Pfam PF07927 HicA toxin of bacterial toxin-antitoxin, 7 60 2.1E-7 T 15-10-2018 IPR012933 HicA mRNA interferase family GO:0003729 Trad_2742 8c12929babd01b95cb7bd188df08b3cb 347 Gene3D G3DSA:1.25.40.10 239 312 5.0E-5 T 15-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Trad_1466 7f2d70e7290e42e1a184498b9a155209 242 Pfam PF00149 Calcineurin-like phosphoesterase 9 207 5.2E-14 T 15-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 Trad_1466 7f2d70e7290e42e1a184498b9a155209 242 PIRSF PIRSF033094 9 240 1.4E-85 T 15-10-2018 IPR014578 Predicted phosphoesterase, CT488 type Trad_1466 7f2d70e7290e42e1a184498b9a155209 242 SUPERFAMILY SSF56300 9 218 4.25E-28 T 15-10-2018 Trad_2829 6c056a56db7823839adf0a14220d97e3 409 Pfam PF16822 SGNH hydrolase-like domain, acetyltransferase AlgX 113 377 2.1E-87 T 15-10-2018 IPR031811 AlgX/AlgJ, SGNH hydrolase-like domain Trad_1089 4bed8fe9a0606f935d8748682bbd4c29 270 Pfam PF09335 SNARE associated Golgi protein 116 233 5.8E-21 T 15-10-2018 IPR032816 SNARE associated Golgi protein Trad_1879 466a2085ae2cfb8a7af78633a0336ce2 86 Pfam PF04226 Transglycosylase associated protein 36 85 1.2E-16 T 15-10-2018 IPR007341 Transglycosylase-associated protein GO:0016021 Trad_0620 d85e6143714d9195f7237f253cec2121 547 Pfam PF01554 MatE 21 183 7.5E-37 T 15-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Trad_0620 d85e6143714d9195f7237f253cec2121 547 Pfam PF01554 MatE 264 411 2.3E-27 T 15-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Trad_0620 d85e6143714d9195f7237f253cec2121 547 TIGRFAM TIGR00797 matE: MATE efflux family protein 21 426 9.5E-83 T 15-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Trad_2881 103fde8ff3d1adcb8ab4c6c9c96f74ea 83 Pfam PF11146 Protein of unknown function (DUF2905) 13 77 6.0E-18 T 15-10-2018 IPR021320 Protein of unknown function DUF2905 Trad_2566 e4b8fb45876e5bf60821c0b80c0df958 179 Pfam PF02517 CAAX protease self-immunity 86 165 2.3E-12 T 15-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 Trad_0737 3661ad0ac0fc5442266c5aaf35f5c72a 411 Pfam PF04932 O-Antigen ligase 193 328 6.6E-16 T 15-10-2018 IPR007016 O-antigen ligase-related Trad_1558 655698d6e0605d3b8c800bd2a682048e 242 Pfam PF02517 CAAX protease self-immunity 140 225 9.1E-7 T 15-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 Trad_1321 d6ca0f19b29201597b26832d2ad39f41 420 Pfam PF00557 Metallopeptidase family M24 195 391 5.7E-13 T 15-10-2018 IPR000994 Peptidase M24 Trad_1321 d6ca0f19b29201597b26832d2ad39f41 420 Gene3D G3DSA:3.90.230.10 174 410 2.1E-16 T 15-10-2018 Trad_1321 d6ca0f19b29201597b26832d2ad39f41 420 SUPERFAMILY SSF55920 198 382 2.09E-16 T 15-10-2018 IPR036005 Creatinase/aminopeptidase-like Trad_0236 1a2bfa09f86535ae4444cef61e95d9ce 143 Gene3D G3DSA:3.30.300.20 1 136 5.3E-27 T 15-10-2018 IPR015946 K homology domain-like, alpha/beta Trad_0236 1a2bfa09f86535ae4444cef61e95d9ce 143 SUPERFAMILY SSF82784 8 133 1.02E-30 T 15-10-2018 IPR036102 OsmC/Ohr superfamily Trad_0236 1a2bfa09f86535ae4444cef61e95d9ce 143 Pfam PF02566 OsmC-like protein 35 131 8.6E-18 T 15-10-2018 IPR003718 OsmC/Ohr family Trad_1468 f2442da7837131e0bbd04b652408a12d 311 Pfam PF00395 S-layer homology domain 39 81 3.2E-9 T 15-10-2018 IPR001119 S-layer homology domain Trad_2134 ce466271c5f8e27cb156f46418d427e8 106 Pfam PF12441 CopG antitoxin of type II toxin-antitoxin system 14 94 2.2E-13 T 15-10-2018 IPR022148 CopG antitoxin Trad_1235 523314bc460243af885175d89c89b684 343 Pfam PF02653 Branched-chain amino acid transport system / permease component 55 329 2.7E-58 T 15-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Trad_0802 6a7f60a49ea5bc9093b2df380b51c332 190 Pfam PF04143 Sulphur transport 118 177 2.3E-11 T 15-10-2018 IPR007272 Sulphur transport domain Trad_1071 7aea6380a963d2098cb4f24e7b36a73c 743 Pfam PF12704 MacB-like periplasmic core domain 371 578 5.6E-9 T 15-10-2018 IPR025857 MacB-like periplasmic core domain Trad_1071 7aea6380a963d2098cb4f24e7b36a73c 743 Pfam PF12704 MacB-like periplasmic core domain 11 176 1.6E-10 T 15-10-2018 IPR025857 MacB-like periplasmic core domain Trad_1071 7aea6380a963d2098cb4f24e7b36a73c 743 Pfam PF02687 FtsX-like permease family 647 731 1.3E-8 T 15-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Trad_2081 f23fa4145a76f0a7d9795841bea3fbec 105 Gene3D G3DSA:1.20.58.1000 10 104 1.2E-28 T 15-10-2018 IPR038390 Metal-sensitive transcriptional repressor superfamily Trad_2081 f23fa4145a76f0a7d9795841bea3fbec 105 Pfam PF02583 Metal-sensitive transcriptional repressor 23 102 6.9E-22 T 15-10-2018 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 Trad_1748 ad8733f45380422fab1b5b478a303dfa 91 Pfam PF13244 Domain of unknown function (DUF4040) 13 76 2.7E-19 T 15-10-2018 IPR025383 Domain of unknown function DUF4040 Trad_1024 867235a16647db0c1f18d08dbf27385b 186 Pfam PF11821 Protein of unknown function (DUF3341) 15 183 1.1E-67 T 15-10-2018 IPR021776 Protein of unknown function DUF3341 Trad_1302 f9460f8a10de17c5d0eb77571b1a261f 74 Pfam PF01402 Ribbon-helix-helix protein, copG family 10 43 7.8E-7 T 15-10-2018 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 Trad_2457 71146db62f212d83f178dbb386b355da 278 Pfam PF09622 Putative integral membrane protein (DUF2391) 19 278 1.2E-95 T 15-10-2018 IPR024464 Protein of unknown function DUF2391 Trad_2457 71146db62f212d83f178dbb386b355da 278 TIGRFAM TIGR02587 TIGR02587: putative integral membrane protein TIGR02587 14 278 8.5E-93 T 15-10-2018 IPR013416 Conserved hypothetical protein CHP02587, putative integral membrane Trad_2236 5ba37d6b30a5a688ae436960e08f35ea 391 Pfam PF04235 Protein of unknown function (DUF418) 224 379 6.7E-42 T 15-10-2018 IPR007349 Domain of unknown function DUF418 Trad_1117 7c209b6de2e159bf1022f932e34dd912 140 Pfam PF03780 Asp23 family, cell envelope-related function 23 121 5.8E-22 T 15-10-2018 IPR005531 Alkaline shock protein Asp23 Trad_1856 cd251cac864b74a0208323785d978e39 279 Pfam PF13387 Domain of unknown function (DUF4105) 66 223 1.1E-37 T 15-10-2018 IPR025178 Domain of unknown function DUF4105 Trad_2822 7e0d5ab36b00107143b48cfa8780d491 215 Pfam PF13468 Glyoxalase-like domain 4 176 1.9E-22 T 15-10-2018 IPR025870 Glyoxalase-like domain Trad_2822 7e0d5ab36b00107143b48cfa8780d491 215 Gene3D G3DSA:3.10.180.10 1 149 3.2E-9 T 15-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Trad_1744 08c44cbfe437ed31ed59970953f81953 168 Pfam PF01899 Na+/H+ ion antiporter subunit 17 159 1.2E-24 T 15-10-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 Trad_0093 470d5e043cbfd8e1a15b1d8f0cd98e68 175 Pfam PF13548 Domain of unknown function (DUF4126) 26 169 1.6E-9 T 15-10-2018 IPR025196 Domain of unknown function DUF4126 Trad_0566 cba78855e1a3124518f5a3c1b7d24ca1 130 Pfam PF13778 Domain of unknown function (DUF4174) 6 122 5.0E-32 T 15-10-2018 IPR025232 Domain of unknown function DUF4174 Trad_2237 90a0c40202f6e112b28b8f51cc9859c5 151 Pfam PF02517 CAAX protease self-immunity 49 137 2.2E-8 T 15-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 Trad_1806 c4dc489b748cc578366a8a10d72b5fc1 269 SUPERFAMILY SSF50969 41 145 1.57E-9 T 15-10-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like Trad_0455 b2807e0ba09bfebb1008c1d0c000741b 190 SUPERFAMILY SSF46966 21 103 2.88E-5 T 15-10-2018 Trad_2496 e3d285451df842b283e74af77703d7c7 154 SUPERFAMILY SSF103473 14 138 4.05E-5 T 15-10-2018 IPR036259 MFS transporter superfamily Trad_0053 25c7488d8dec0ead2de0c3762b5f134b 162 Pfam PF08905 Domain of unknown function (DUF1850) 47 136 2.2E-17 T 15-10-2018 IPR015001 Protein of unknown function DUF1850 Trad_0879 e2db0e874f36fd6dc036feff7802a3c4 126 Pfam PF13115 YtkA-like 26 105 2.4E-12 T 15-10-2018 IPR032693 YtkA-like domain Trad_1790 c821e179e3be598bc260c59f54cbc15d 293 Pfam PF09922 Cell wall-active antibiotics response 4TMS YvqF 193 289 4.2E-7 T 15-10-2018 IPR024425 Cell wall-active antibiotics response 4TMS YvqF Trad_1025 8dc349460e6c8bb431b9f2e5daaca00c 474 Pfam PF03916 Polysulphide reductase, NrfD 74 396 7.8E-24 T 15-10-2018 IPR005614 NrfD family Trad_1722 c7632740db728b9968703576ff5182ba 486 SUPERFAMILY SSF53474 59 473 1.07E-16 T 15-10-2018 IPR029058 Alpha/Beta hydrolase fold Trad_2966 e005779ac7a02ec4c6a7a68062503dff 263 Pfam PF02754 Cysteine-rich domain 134 218 5.0E-13 T 15-10-2018 IPR004017 Cysteine-rich domain Trad_2966 e005779ac7a02ec4c6a7a68062503dff 263 Pfam PF02754 Cysteine-rich domain 3 81 8.0E-15 T 15-10-2018 IPR004017 Cysteine-rich domain Trad_1170 257c1a76c7b661fe5a571ebf205f87c4 409 Pfam PF02687 FtsX-like permease family 297 401 5.6E-10 T 15-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Trad_2212 71ceea65723e99712273b844d51cc7cb 234 SUPERFAMILY SSF52540 2 143 2.84E-8 T 15-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Trad_2212 71ceea65723e99712273b844d51cc7cb 234 Gene3D G3DSA:3.40.50.300 2 153 6.4E-7 T 15-10-2018 Trad_2564 a86a5124d7be854acdd1d824a36a72e4 385 Pfam PF01594 AI-2E family transporter 31 356 5.2E-54 T 15-10-2018 IPR002549 Transmembrane protein TqsA-like Trad_2120 c9127d2da66e53c27433e9fa2c83e43d 311 Gene3D G3DSA:3.40.1350.10 17 102 2.5E-6 T 15-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 Trad_1150 3489cf3eda3dd3a9f52f8c93a5bb3914 390 Pfam PF01594 AI-2E family transporter 17 350 6.2E-52 T 15-10-2018 IPR002549 Transmembrane protein TqsA-like Trad_2253 5b730b8e14235daa7ba341fbf438b282 350 Pfam PF14397 Sugar-transfer associated ATP-grasp 81 333 4.7E-31 T 15-10-2018 IPR039523 Alpha-L-glutamate ligase-related protein, ATP-grasp domain KEGG: 00270+6.3.2.2+6.3.2.3|KEGG: 00480+6.3.2.2+6.3.2.3|MetaCyc: PWY-6840|MetaCyc: PWY-7255 Trad_2253 5b730b8e14235daa7ba341fbf438b282 350 SUPERFAMILY SSF56059 76 323 2.12E-7 T 15-10-2018 Trad_0291 ef7f124399722e9f3c43ef9b05c74a90 66 Pfam PF04024 PspC domain 5 61 6.7E-25 T 15-10-2018 IPR007168 Phage shock protein, PspC, N-terminal Trad_2683 664ad58d95e3db6ecf557231a65bf389 273 Gene3D G3DSA:2.60.40.10 33 118 2.5E-5 T 15-10-2018 IPR013783 Immunoglobulin-like fold Trad_0278 c80e888e2bd44f8d6eca8035fe1ded11 134 Pfam PF14079 Domain of unknown function (DUF4260) 20 130 8.6E-42 T 15-10-2018 IPR025356 Protein of unknown function DUF4260 Trad_0065 28f594f49db31a0f422a5c8896e55253 221 Pfam PF01478 Type IV leader peptidase family 48 178 3.5E-12 T 15-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 Trad_2160 93d45faa4191db6d7b56e44da62c11e9 171 Pfam PF03640 Secreted repeat of unknown function 55 93 2.3E-11 T 15-10-2018 IPR005297 Lipoprotein repeat Trad_2160 93d45faa4191db6d7b56e44da62c11e9 171 Pfam PF03640 Secreted repeat of unknown function 112 153 5.0E-18 T 15-10-2018 IPR005297 Lipoprotein repeat Trad_2900 55b7559c08f250c5db53a0f42b62943f 173 Pfam PF14196 L-2-amino-thiazoline-4-carboxylic acid hydrolase 31 170 4.2E-35 T 15-10-2018 IPR026002 L-2-amino-thiazoline-4-carboxylic acid hydrolase Trad_0643 0e54d1e49edebe2414ea9160e02beae1 132 Pfam PF13430 Domain of unknown function (DUF4112) 26 128 8.9E-35 T 15-10-2018 IPR025187 Protein of unknown function DUF4112 Trad_2930 a9b147800fe1da52b582a0148a3e86ed 117 Pfam PF04930 FUN14 family 24 114 3.7E-23 T 15-10-2018 IPR007014 FUN14 Trad_0973 d0b7c519a030853b29e71b661c680be9 491 Pfam PF02653 Branched-chain amino acid transport system / permease component 58 354 1.9E-35 T 15-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Trad_1270 e95cc095d58c6f2a072259b04e445bdd 232 Pfam PF02397 Bacterial sugar transferase 19 196 4.7E-61 T 15-10-2018 IPR003362 Bacterial sugar transferase Trad_1788 b7a4891a03e76c7efbd331f2ab9d89dd 175 Pfam PF06271 RDD family 18 132 2.8E-21 T 15-10-2018 IPR010432 RDD Trad_0663 54676321f7e7a1246bc658994cc56701 488 Pfam PF16257 tagaturonate epimerase 61 481 8.0E-141 T 15-10-2018 IPR032586 Tagaturonate epimerase Trad_1166 51a63aa83864bbd3e6f1115a9a22568c 262 Pfam PF03073 TspO/MBR family 26 173 5.0E-11 T 15-10-2018 IPR004307 TspO/MBR-related protein GO:0016021