locus-tag class description M1F28_00005 PF00308 Bacterial dnaA protein M1F28_00005 PF08299 Bacterial dnaA protein helix-turn-helix M1F28_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain M1F28_00010 PF02767 DNA polymerase III beta subunit, central domain M1F28_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain M1F28_00015 PF02463 RecF/RecN/SMC N terminal domain M1F28_00025 PF00204 DNA gyrase B M1F28_00025 PF00986 DNA gyrase B subunit, carboxyl terminus M1F28_00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1F28_00025 PF01751 Toprim domain M1F28_00030 PF00521 DNA gyrase/topoisomerase IV, subunit A M1F28_00030 PF03989 DNA gyrase C-terminal domain, beta-propeller M1F28_00035 PF12089 Transmembrane domain of unknown function (DUF3566) M1F28_00070 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD M1F28_00075 PF01694 Rhomboid family M1F28_00080 PF06781 Cell division protein CrgA M1F28_00085 PF04203 Sortase domain M1F28_00095 PF03793 PASTA domain M1F28_00095 PF00069 Protein kinase domain M1F28_00100 PF00905 Penicillin binding protein transpeptidase domain M1F28_00105 PF01098 Cell cycle protein M1F28_00115 PF16697 Inner membrane component of T3SS, cytoplasmic domain M1F28_00120 PF00005 ABC transporter M1F28_00120 PF00498 FHA domain M1F28_00120 PF01061 ABC-2 type transporter M1F28_00130 PF00326 Prolyl oligopeptidase family M1F28_00130 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain M1F28_00140 PF00075 RNase H M1F28_00145 PF01661 Macro domain M1F28_00150 PF01048 Phosphorylase superfamily M1F28_00155 PF02664 S-Ribosylhomocysteinase (LuxS) M1F28_00160 PF01475 Ferric uptake regulator family M1F28_00170 PF07972 NrdI Flavodoxin like M1F28_00175 PF08343 Ribonucleotide reductase N-terminal M1F28_00175 PF00317 Ribonucleotide reductase, all-alpha domain M1F28_00175 PF02867 Ribonucleotide reductase, barrel domain M1F28_00180 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain M1F28_00180 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain M1F28_00190 PF00268 Ribonucleotide reductase, small chain M1F28_00195 PF01451 Low molecular weight phosphotyrosine protein phosphatase M1F28_00210 PF00528 Binding-protein-dependent transport system inner membrane component M1F28_00215 PF00528 Binding-protein-dependent transport system inner membrane component M1F28_00235 PF00743 Flavin-binding monooxygenase-like M1F28_00245 PF04408 Helicase associated domain (HA2) M1F28_00245 PF11898 Domain of unknown function (DUF3418) M1F28_00245 PF00271 Helicase conserved C-terminal domain M1F28_00245 PF00270 DEAD/DEAH box helicase M1F28_00245 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold M1F28_00250 PF00196 Bacterial regulatory proteins, luxR family M1F28_00250 PF00072 Response regulator receiver domain M1F28_00255 PF07730 Histidine kinase M1F28_00265 PF00005 ABC transporter M1F28_00275 PF00005 ABC transporter M1F28_00285 PF00196 Bacterial regulatory proteins, luxR family M1F28_00285 PF00072 Response regulator receiver domain M1F28_00290 PF01263 Aldose 1-epimerase M1F28_00295 PF03477 ATP cone domain M1F28_00295 PF13597 Anaerobic ribonucleoside-triphosphate reductase M1F28_00305 PF01757 Acyltransferase family M1F28_00315 PF12704 MacB-like periplasmic core domain M1F28_00315 PF02687 FtsX-like permease family M1F28_00315 PF00005 ABC transporter M1F28_00320 PF09339 IclR helix-turn-helix domain M1F28_00320 PF01614 Bacterial transcriptional regulator M1F28_00325 PF01232 Mannitol dehydrogenase Rossmann domain M1F28_00325 PF08125 Mannitol dehydrogenase C-terminal domain M1F28_00330 PF03786 D-mannonate dehydratase (UxuA) M1F28_00335 PF01081 KDPG and KHG aldolase M1F28_00340 PF00294 pfkB family carbohydrate kinase M1F28_00345 PF13649 Methyltransferase domain M1F28_00355 PF00005 ABC transporter M1F28_00365 PF01032 FecCD transport family M1F28_00380 PF00664 ABC transporter transmembrane region M1F28_00380 PF00005 ABC transporter M1F28_00385 PF00664 ABC transporter transmembrane region M1F28_00385 PF00005 ABC transporter M1F28_00390 PF00356 Bacterial regulatory proteins, lacI family M1F28_00405 PF00528 Binding-protein-dependent transport system inner membrane component M1F28_00410 PF00528 Binding-protein-dependent transport system inner membrane component M1F28_00425 PF12008 Type I restriction and modification enzyme - subunit R C terminal M1F28_00425 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) M1F28_00425 PF18766 SWI2/SNF2 ATPase M1F28_00440 PF01420 Type I restriction modification DNA specificity domain M1F28_00445 PF02384 N-6 DNA Methylase M1F28_00445 PF12161 HsdM N-terminal domain M1F28_00450 PF08544 GHMP kinases C terminal M1F28_00450 PF10509 Galactokinase galactose-binding signature M1F28_00450 PF00288 GHMP kinases N terminal domain M1F28_00475 PF00005 ABC transporter M1F28_00480 PF02653 Branched-chain amino acid transport system / permease component M1F28_00485 PF13407 Periplasmic binding protein domain M1F28_00490 PF00294 pfkB family carbohydrate kinase M1F28_00490 PF01467 Cytidylyltransferase-like M1F28_00495 PF11975 Family 4 glycosyl hydrolase C-terminal domain M1F28_00495 PF02056 Family 4 glycosyl hydrolase M1F28_00525 PF02403 Seryl-tRNA synthetase N-terminal domain M1F28_00525 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M1F28_00540 PF00800 Prephenate dehydratase M1F28_00570 PF14437 MafB19-like deaminase M1F28_00580 PF05525 Branched-chain amino acid transport protein M1F28_00585 PF08903 Domain of unknown function (DUF1846) M1F28_00600 PF00899 ThiF family M1F28_00600 PF00581 Rhodanese-like domain M1F28_00630 PF00528 Binding-protein-dependent transport system inner membrane component M1F28_00640 PF00994 Probable molybdopterin binding domain M1F28_00645 PF03453 MoeA N-terminal region (domain I and II) M1F28_00645 PF00994 Probable molybdopterin binding domain M1F28_00645 PF03454 MoeA C-terminal region (domain IV) M1F28_00650 PF01967 MoaC family M1F28_00655 PF02391 MoaE protein M1F28_00660 PF04055 Radical SAM superfamily M1F28_00660 PF06463 Molybdenum Cofactor Synthesis C M1F28_00670 PF00128 Alpha amylase, catalytic domain M1F28_00670 PF02903 Alpha amylase, N-terminal ig-like domain M1F28_00685 PF00912 Transglycosylase M1F28_00685 PF00905 Penicillin binding protein transpeptidase domain M1F28_00690 PF02467 Transcription factor WhiB M1F28_00710 PF13545 Crp-like helix-turn-helix domain M1F28_00710 PF00027 Cyclic nucleotide-binding domain M1F28_00715 PF10576 Iron-sulfur binding domain of endonuclease III M1F28_00715 PF00730 HhH-GPD superfamily base excision DNA repair protein M1F28_00715 PF00633 Helix-hairpin-helix motif M1F28_00720 PF00561 alpha/beta hydrolase fold M1F28_00735 PF00437 Type II/IV secretion system protein M1F28_00765 PF00270 DEAD/DEAH box helicase M1F28_00765 PF00271 Helicase conserved C-terminal domain M1F28_00770 PF13443 Cro/C1-type HTH DNA-binding domain M1F28_00780 PF05175 Methyltransferase small domain M1F28_00780 PF17827 PrmC N-terminal domain M1F28_00780 PF02390 Putative methyltransferase M1F28_00785 PF01131 DNA topoisomerase M1F28_00785 PF01751 Toprim domain M1F28_00785 PF13368 Topoisomerase C-terminal repeat M1F28_00790 PF02223 Thymidylate kinase M1F28_00795 PF12169 DNA polymerase III subunits gamma and tau domain III M1F28_00800 PF00561 alpha/beta hydrolase fold M1F28_00830 PF00665 Integrase core domain M1F28_00830 PF13333 Integrase core domain M1F28_00830 PF13276 HTH-like domain M1F28_00850 PF06559 2'-deoxycytidine 5'-triphosphate deaminase (DCD) M1F28_00855 PF13244 Domain of unknown function (DUF4040) M1F28_00855 PF00361 Proton-conducting membrane transporter M1F28_00855 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter M1F28_00855 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus M1F28_00860 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L M1F28_00865 PF00361 Proton-conducting membrane transporter M1F28_00895 PF00528 Binding-protein-dependent transport system inner membrane component M1F28_00900 PF00005 ABC transporter M1F28_00900 PF08402 TOBE domain M1F28_00910 PF07690 Major Facilitator Superfamily M1F28_00915 PF07883 Cupin domain M1F28_00955 PF00480 ROK family M1F28_00960 PF03649 Uncharacterised protein family (UPF0014) M1F28_00970 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain M1F28_00970 PF00326 Prolyl oligopeptidase family M1F28_00980 PF12800 4Fe-4S binding domain M1F28_00980 PF13247 4Fe-4S dicluster domain M1F28_00985 PF01568 Molydopterin dinucleotide binding domain M1F28_00985 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M1F28_00985 PF00384 Molybdopterin oxidoreductase M1F28_00990 PF02583 Metal-sensitive transcriptional repressor M1F28_00995 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M1F28_00995 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1F28_01005 PF00156 Phosphoribosyl transferase domain M1F28_01010 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain M1F28_01010 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain M1F28_01015 PF01979 Amidohydrolase family M1F28_01020 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family M1F28_01025 PF00156 Phosphoribosyl transferase domain M1F28_01030 PF01180 Dihydroorotate dehydrogenase M1F28_01035 PF00012 Hsp70 protein M1F28_01040 PF01025 GrpE M1F28_01045 PF00226 DnaJ domain M1F28_01045 PF01556 DnaJ C terminal domain M1F28_01045 PF00684 DnaJ central domain M1F28_01055 PF00293 NUDIX domain M1F28_01070 PF03009 Glycerophosphoryl diester phosphodiesterase family M1F28_01075 PF00326 Prolyl oligopeptidase family M1F28_01075 PF07676 WD40-like Beta Propeller Repeat M1F28_01075 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region M1F28_01085 PF00749 tRNA synthetases class I (E and Q), catalytic domain M1F28_01095 PF07724 AAA domain (Cdc48 subfamily) M1F28_01095 PF00004 ATPase family associated with various cellular activities (AAA) M1F28_01095 PF02861 Clp amino terminal domain, pathogenicity island component M1F28_01095 PF10431 C-terminal, D2-small domain, of ClpB protein M1F28_01095 PF17871 AAA lid domain M1F28_01130 PF00293 NUDIX domain M1F28_01140 PF01384 Phosphate transporter family M1F28_01145 PF01116 Fructose-bisphosphate aldolase class-II M1F28_01155 PF00709 Adenylosuccinate synthetase M1F28_01160 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain M1F28_01160 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain M1F28_01165 PF01259 SAICAR synthetase M1F28_01170 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase M1F28_01170 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain M1F28_01200 PF02028 BCCT, betaine/carnitine/choline family transporter M1F28_01210 PF17802 Prealbumin-like fold domain M1F28_01210 PF05738 Cna protein B-type domain M1F28_01210 PF05737 Collagen binding domain M1F28_01230 PF00056 lactate/malate dehydrogenase, NAD binding domain M1F28_01230 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain M1F28_01235 PF03023 Lipid II flippase MurJ M1F28_01260 PF01641 SelR domain M1F28_01285 PF17941 Polyphosphate kinase C-terminal domain 1 M1F28_01285 PF13089 Polyphosphate kinase N-terminal domain M1F28_01285 PF02503 Polyphosphate kinase middle domain M1F28_01285 PF13090 Polyphosphate kinase C-terminal domain 2 M1F28_01290 PF00293 NUDIX domain M1F28_01290 PF00300 Histidine phosphatase superfamily (branch 1) M1F28_01295 PF12849 PBP superfamily domain M1F28_01300 PF00528 Binding-protein-dependent transport system inner membrane component M1F28_01305 PF00528 Binding-protein-dependent transport system inner membrane component M1F28_01310 PF00005 ABC transporter M1F28_01315 PF01384 Phosphate transporter family M1F28_01325 PF01235 Sodium:alanine symporter family M1F28_01335 PF00149 Calcineurin-like phosphoesterase M1F28_01335 PF02872 5'-nucleotidase, C-terminal domain M1F28_01350 PF08768 Domain of unknown function (DUF1794) M1F28_01355 PF01571 Aminomethyltransferase folate-binding domain M1F28_01365 PF02580 D-Tyr-tRNA(Tyr) deacylase M1F28_01370 PF02861 Clp amino terminal domain, pathogenicity island component M1F28_01370 PF17871 AAA lid domain M1F28_01370 PF07724 AAA domain (Cdc48 subfamily) M1F28_01370 PF00004 ATPase family associated with various cellular activities (AAA) M1F28_01370 PF10431 C-terminal, D2-small domain, of ClpB protein M1F28_01375 PF00294 pfkB family carbohydrate kinase M1F28_01385 PF07690 Major Facilitator Superfamily M1F28_01390 PF04198 Putative sugar-binding domain M1F28_01405 PF00370 FGGY family of carbohydrate kinases, N-terminal domain M1F28_01405 PF02782 FGGY family of carbohydrate kinases, C-terminal domain M1F28_01410 PF05573 NosL M1F28_01410 PF08220 DeoR-like helix-turn-helix domain M1F28_01420 PF00370 FGGY family of carbohydrate kinases, N-terminal domain M1F28_01420 PF02782 FGGY family of carbohydrate kinases, C-terminal domain M1F28_01425 PF00596 Class II Aldolase and Adducin N-terminal domain M1F28_01430 PF02782 FGGY family of carbohydrate kinases, C-terminal domain M1F28_01430 PF00370 FGGY family of carbohydrate kinases, N-terminal domain M1F28_01435 PF02734 DAK2 domain M1F28_01435 PF02733 Dak1 domain M1F28_01440 PF00107 Zinc-binding dehydrogenase M1F28_01440 PF08240 Alcohol dehydrogenase GroES-like domain M1F28_01445 PF02502 Ribose/Galactose Isomerase M1F28_01450 PF01925 Sulfite exporter TauE/SafE M1F28_01455 PF13186 Iron-sulfur cluster-binding domain M1F28_01455 PF04055 Radical SAM superfamily M1F28_01460 PF00083 Sugar (and other) transporter M1F28_01465 PF00356 Bacterial regulatory proteins, lacI family M1F28_01470 PF00884 Sulfatase M1F28_01485 PF00528 Binding-protein-dependent transport system inner membrane component M1F28_01490 PF00005 ABC transporter M1F28_01490 PF08402 TOBE domain M1F28_01495 PF00480 ROK family M1F28_01500 PF01261 Xylose isomerase-like TIM barrel M1F28_01505 PF02782 FGGY family of carbohydrate kinases, C-terminal domain M1F28_01505 PF00370 FGGY family of carbohydrate kinases, N-terminal domain M1F28_01510 PF13416 Bacterial extracellular solute-binding protein M1F28_01515 PF00528 Binding-protein-dependent transport system inner membrane component M1F28_01520 PF00528 Binding-protein-dependent transport system inner membrane component M1F28_01525 PF00884 Sulfatase M1F28_01525 PF16347 Domain of unknown function (DUF4976) M1F28_01535 PF04198 Putative sugar-binding domain M1F28_01535 PF00325 Bacterial regulatory proteins, crp family M1F28_01545 PF02447 GntP family permease M1F28_01555 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M1F28_01555 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain M1F28_01565 PF07691 PA14 domain M1F28_01565 PF00728 Glycosyl hydrolase family 20, catalytic domain M1F28_01565 PF02838 Glycosyl hydrolase family 20, domain 2 M1F28_01570 PF02837 Glycosyl hydrolases family 2, sugar binding domain M1F28_01570 PF02836 Glycosyl hydrolases family 2, TIM barrel domain M1F28_01570 PF00703 Glycosyl hydrolases family 2 M1F28_01570 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 M1F28_01570 PF16355 Domain of unknown function (DUF4982) M1F28_01575 PF05025 RbsD / FucU transport protein family M1F28_01580 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) M1F28_01580 PF00294 pfkB family carbohydrate kinase M1F28_01585 PF13407 Periplasmic binding protein domain M1F28_01590 PF02653 Branched-chain amino acid transport system / permease component M1F28_01595 PF00005 ABC transporter M1F28_01600 PF00356 Bacterial regulatory proteins, lacI family M1F28_01605 PF13649 Methyltransferase domain M1F28_01610 PF00005 ABC transporter M1F28_01630 PF00149 Calcineurin-like phosphoesterase M1F28_01630 PF02872 5'-nucleotidase, C-terminal domain M1F28_01640 PF00356 Bacterial regulatory proteins, lacI family M1F28_01645 PF00083 Sugar (and other) transporter M1F28_01650 PF02308 MgtC family M1F28_01665 PF01545 Cation efflux family M1F28_01675 PF12728 Helix-turn-helix domain M1F28_01675 PF02661 Fic/DOC family M1F28_01680 PF18395 Cas3 C-terminal domain M1F28_01680 PF00270 DEAD/DEAH box helicase M1F28_01680 PF18019 HD domain M1F28_01710 PF01867 CRISPR associated protein Cas1 M1F28_01720 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH M1F28_01730 PF01381 Helix-turn-helix M1F28_01735 PF00128 Alpha amylase, catalytic domain M1F28_01740 PF00528 Binding-protein-dependent transport system inner membrane component M1F28_01745 PF00528 Binding-protein-dependent transport system inner membrane component M1F28_01760 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain M1F28_01760 PF02896 PEP-utilising enzyme, TIM barrel domain M1F28_01760 PF00391 PEP-utilising enzyme, mobile domain M1F28_01765 PF02913 FAD linked oxidases, C-terminal domain M1F28_01765 PF01565 FAD binding domain M1F28_01765 PF13183 4Fe-4S dicluster domain M1F28_01775 PF12146 Serine aminopeptidase, S33 M1F28_01780 PF00561 alpha/beta hydrolase fold M1F28_01785 PF00877 NlpC/P60 family M1F28_01790 PF00719 Inorganic pyrophosphatase M1F28_01795 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family M1F28_01805 PF01171 PP-loop family M1F28_01805 PF09179 TilS substrate binding domain M1F28_01810 PF00156 Phosphoribosyl transferase domain M1F28_01815 PF00004 ATPase family associated with various cellular activities (AAA) M1F28_01815 PF01434 Peptidase family M41 M1F28_01815 PF17862 AAA+ lid domain M1F28_01820 PF01227 GTP cyclohydrolase I M1F28_01825 PF00809 Pterin binding enzyme M1F28_01830 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) M1F28_01850 PF00356 Bacterial regulatory proteins, lacI family M1F28_01855 PF13416 Bacterial extracellular solute-binding protein M1F28_01860 PF00528 Binding-protein-dependent transport system inner membrane component M1F28_01865 PF00528 Binding-protein-dependent transport system inner membrane component M1F28_01870 PF02929 Beta galactosidase small chain M1F28_01870 PF16353 Domain of unknown function(DUF4981) M1F28_01870 PF00703 Glycosyl hydrolases family 2 M1F28_01870 PF02836 Glycosyl hydrolases family 2, TIM barrel domain M1F28_01870 PF02837 Glycosyl hydrolases family 2, sugar binding domain M1F28_01880 PF05524 PEP-utilising enzyme, N-terminal M1F28_01880 PF00391 PEP-utilising enzyme, mobile domain M1F28_01880 PF02896 PEP-utilising enzyme, TIM barrel domain M1F28_01880 PF00381 PTS HPr component phosphorylation site M1F28_01880 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 M1F28_01885 PF02734 DAK2 domain M1F28_01890 PF02733 Dak1 domain M1F28_01900 PF02569 Pantoate-beta-alanine ligase M1F28_01905 PF02261 Aspartate decarboxylase M1F28_01915 PF01336 OB-fold nucleic acid binding domain M1F28_01915 PF00152 tRNA synthetases class II (D, K and N) M1F28_01920 PF03176 MMPL family M1F28_01925 PF02782 FGGY family of carbohydrate kinases, C-terminal domain M1F28_01925 PF00370 FGGY family of carbohydrate kinases, N-terminal domain M1F28_01930 PF00230 Major intrinsic protein M1F28_01945 PF13183 4Fe-4S dicluster domain M1F28_01945 PF02754 Cysteine-rich domain M1F28_01950 PF00890 FAD binding domain M1F28_01955 PF01266 FAD dependent oxidoreductase M1F28_01955 PF04324 BFD-like [2Fe-2S] binding domain M1F28_01970 PF10576 Iron-sulfur binding domain of endonuclease III M1F28_01970 PF00633 Helix-hairpin-helix motif M1F28_01970 PF00730 HhH-GPD superfamily base excision DNA repair protein M1F28_01980 PF06745 KaiC M1F28_01980 PF18073 Rubredoxin metal binding domain M1F28_01985 PF02254 TrkA-N domain M1F28_01985 PF02080 TrkA-C domain M1F28_01990 PF02386 Cation transport protein M1F28_01995 PF12728 Helix-turn-helix domain M1F28_02005 PF01047 MarR family M1F28_02010 PF00300 Histidine phosphatase superfamily (branch 1) M1F28_02020 PF01040 UbiA prenyltransferase family M1F28_02025 PF13193 AMP-binding enzyme C-terminal domain M1F28_02025 PF00501 AMP-binding enzyme M1F28_02035 PF00528 Binding-protein-dependent transport system inner membrane component M1F28_02040 PF00528 Binding-protein-dependent transport system inner membrane component M1F28_02050 PF00378 Enoyl-CoA hydratase/isomerase M1F28_02055 PF13378 Enolase C-terminal domain-like M1F28_02055 PF18374 Enolase N-terminal domain-like M1F28_02060 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M1F28_02060 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M1F28_02065 PF13180 PDZ domain M1F28_02070 PF00425 chorismate binding enzyme M1F28_02075 PF01209 ubiE/COQ5 methyltransferase family M1F28_02080 PF01494 FAD binding domain M1F28_02085 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 M1F28_02090 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit M1F28_02095 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit M1F28_02100 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit M1F28_02110 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit M1F28_02110 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region M1F28_02110 PF10531 SLBB domain M1F28_02115 PF01568 Molydopterin dinucleotide binding domain M1F28_02115 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region M1F28_02115 PF00384 Molybdopterin oxidoreductase M1F28_02120 PF00146 NADH dehydrogenase M1F28_02125 PF12838 4Fe-4S dicluster domain M1F28_02130 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 M1F28_02135 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L M1F28_02140 PF00361 Proton-conducting membrane transporter M1F28_02140 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus M1F28_02145 PF00361 Proton-conducting membrane transporter M1F28_02150 PF00361 Proton-conducting membrane transporter M1F28_02155 PF00348 Polyprenyl synthetase M1F28_02160 PF07516 SecA Wing and Scaffold domain M1F28_02160 PF01043 SecA preprotein cross-linking domain M1F28_02160 PF07517 SecA DEAD-like domain M1F28_02200 PF13476 AAA domain M1F28_02205 PF00149 Calcineurin-like phosphoesterase M1F28_02205 PF12320 Type 5 capsule protein repressor C-terminal domain M1F28_02210 PF00459 Inositol monophosphatase family M1F28_02215 PF03193 RsgA GTPase M1F28_02220 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) M1F28_02245 PF07859 alpha/beta hydrolase fold M1F28_02255 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M1F28_02260 PF00528 Binding-protein-dependent transport system inner membrane component M1F28_02265 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M1F28_02265 PF00005 ABC transporter M1F28_02270 PF00005 ABC transporter M1F28_02270 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M1F28_02275 PF00701 Dihydrodipicolinate synthetase family M1F28_02280 PF00480 ROK family M1F28_02285 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase M1F28_02290 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase M1F28_02295 PF01979 Amidohydrolase family M1F28_02300 PF08281 Sigma-70, region 4 M1F28_02300 PF04542 Sigma-70 region 2 M1F28_02315 PF08239 Bacterial SH3 domain M1F28_02315 PF00877 NlpC/P60 family M1F28_02315 PF01476 LysM domain M1F28_02325 PF16078 2-oxoglutarate dehydrogenase N-terminus M1F28_02325 PF16870 2-oxoglutarate dehydrogenase C-terminal M1F28_02325 PF02779 Transketolase, pyrimidine binding domain M1F28_02325 PF00676 Dehydrogenase E1 component M1F28_02325 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M1F28_02330 PF00571 CBS domain M1F28_02330 PF01595 Cyclin M transmembrane N-terminal domain M1F28_02330 PF03471 Transporter associated domain M1F28_02335 PF00571 CBS domain M1F28_02335 PF01595 Cyclin M transmembrane N-terminal domain M1F28_02340 PF01551 Peptidase family M23 M1F28_02345 PF03009 Glycerophosphoryl diester phosphodiesterase family M1F28_02360 PF00005 ABC transporter M1F28_02385 PF03485 Arginyl tRNA synthetase N terminal domain M1F28_02385 PF05746 DALR anticodon binding domain M1F28_02385 PF00750 tRNA synthetases class I (R) M1F28_02390 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain M1F28_02390 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain M1F28_02395 PF03447 Homoserine dehydrogenase, NAD binding domain M1F28_02395 PF00742 Homoserine dehydrogenase M1F28_02395 PF01842 ACT domain M1F28_02400 PF00291 Pyridoxal-phosphate dependent enzyme M1F28_02405 PF00288 GHMP kinases N terminal domain M1F28_02410 PF07497 Rho termination factor, RNA-binding domain M1F28_02410 PF07498 Rho termination factor, N-terminal domain M1F28_02410 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M1F28_02415 PF01197 Ribosomal protein L31 M1F28_02420 PF03462 PCRF domain M1F28_02420 PF00472 RF-1 domain M1F28_02425 PF17827 PrmC N-terminal domain M1F28_02430 PF01300 Telomere recombination M1F28_02435 PF00953 Glycosyl transferase family 4 M1F28_02445 PF00119 ATP synthase A chain M1F28_02450 PF00137 ATP synthase subunit C M1F28_02455 PF00430 ATP synthase B/B' CF(0) M1F28_02460 PF00213 ATP synthase delta (OSCP) subunit M1F28_02465 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M1F28_02465 PF02874 ATP synthase alpha/beta family, beta-barrel domain M1F28_02465 PF00306 ATP synthase alpha/beta chain, C terminal domain M1F28_02470 PF00231 ATP synthase M1F28_02475 PF02874 ATP synthase alpha/beta family, beta-barrel domain M1F28_02475 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M1F28_02480 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain M1F28_02480 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain M1F28_02490 PF01939 Endonuclease NucS M1F28_02530 PF00128 Alpha amylase, catalytic domain M1F28_02530 PF16657 Maltogenic Amylase, C-terminal domain M1F28_02535 PF00356 Bacterial regulatory proteins, lacI family M1F28_02545 PF00528 Binding-protein-dependent transport system inner membrane component M1F28_02545 PF14785 Maltose transport system permease protein MalF P2 domain M1F28_02550 PF00528 Binding-protein-dependent transport system inner membrane component M1F28_02560 PF02806 Alpha amylase, C-terminal all-beta domain M1F28_02560 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) M1F28_02560 PF00128 Alpha amylase, catalytic domain M1F28_02565 PF01636 Phosphotransferase enzyme family M1F28_02565 PF18085 Maltokinase N-terminal cap domain M1F28_02570 PF00128 Alpha amylase, catalytic domain M1F28_02570 PF16657 Maltogenic Amylase, C-terminal domain M1F28_02575 PF00128 Alpha amylase, catalytic domain M1F28_02575 PF11896 Domain of unknown function (DUF3416) M1F28_02585 PF00005 ABC transporter M1F28_02600 PF07885 Ion channel M1F28_02605 PF00343 Carbohydrate phosphorylase M1F28_02610 PF00579 tRNA synthetases class I (W and Y) M1F28_02615 PF00128 Alpha amylase, catalytic domain M1F28_02615 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) M1F28_02620 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain M1F28_02620 PF09297 NADH pyrophosphatase zinc ribbon domain M1F28_02620 PF00293 NUDIX domain M1F28_02625 PF13361 UvrD-like helicase C-terminal domain M1F28_02625 PF00570 HRDC domain M1F28_02625 PF00580 UvrD/REP helicase N-terminal domain M1F28_02640 PF05362 Lon protease (S16) C-terminal proteolytic domain M1F28_02640 PF13180 PDZ domain M1F28_02650 PF03699 Uncharacterised protein family (UPF0182) M1F28_02655 PF18080 Galactose mutarotase-like fold domain M1F28_02655 PF17974 Galactose-binding domain-like M1F28_02655 PF17451 Glycosyl hydrolase 101 beta sandwich domain M1F28_02655 PF12905 Endo-alpha-N-acetylgalactosaminidase M1F28_02655 PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase M1F28_02655 PF08305 NPCBM/NEW2 domain M1F28_02680 PF00155 Aminotransferase class I and II M1F28_02680 PF00392 Bacterial regulatory proteins, gntR family M1F28_02685 PF00005 ABC transporter M1F28_02695 PF01699 Sodium/calcium exchanger protein M1F28_02705 PF00890 FAD binding domain M1F28_02705 PF02910 Fumarate reductase flavoprotein C-term M1F28_02715 PF00296 Luciferase-like monooxygenase M1F28_02725 PF00186 Dihydrofolate reductase M1F28_02730 PF00303 Thymidylate synthase M1F28_02740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1F28_02740 PF07568 Histidine kinase M1F28_02740 PF12282 Signal transduction histidine kinase M1F28_02745 PF02467 Transcription factor WhiB M1F28_02755 PF00005 ABC transporter M1F28_02755 PF02687 FtsX-like permease family M1F28_02755 PF12704 MacB-like periplasmic core domain M1F28_02760 PF00196 Bacterial regulatory proteins, luxR family M1F28_02760 PF00072 Response regulator receiver domain M1F28_02765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1F28_02765 PF07730 Histidine kinase M1F28_02770 PF02586 SOS response associated peptidase (SRAP) M1F28_02775 PF00533 BRCA1 C Terminus (BRCT) domain M1F28_02775 PF01653 NAD-dependent DNA ligase adenylation domain M1F28_02775 PF03120 NAD-dependent DNA ligase OB-fold domain M1F28_02775 PF03119 NAD-dependent DNA ligase C4 zinc finger domain M1F28_02775 PF12826 Helix-hairpin-helix motif M1F28_02790 PF03747 ADP-ribosylglycohydrolase M1F28_02800 PF00294 pfkB family carbohydrate kinase M1F28_02805 PF02661 Fic/DOC family M1F28_02805 PF13784 Fic/DOC family N-terminal M1F28_02815 PF04151 Bacterial pre-peptidase C-terminal domain M1F28_02815 PF00082 Subtilase family M1F28_02820 PF13396 Phospholipase_D-nuclease N-terminal M1F28_02820 PF13091 PLD-like domain M1F28_02825 PF02686 Glu-tRNAGln amidotransferase C subunit M1F28_02830 PF01425 Amidase M1F28_02835 PF02934 GatB/GatE catalytic domain M1F28_02835 PF02637 GatB domain M1F28_02840 PF00390 Malic enzyme, N-terminal domain M1F28_02840 PF03949 Malic enzyme, NAD binding domain M1F28_02880 PF08241 Methyltransferase domain M1F28_02885 PF00920 Dehydratase family M1F28_02890 PF06826 Predicted Permease Membrane Region M1F28_02890 PF02080 TrkA-C domain M1F28_02895 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M1F28_02895 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M1F28_02895 PF00205 Thiamine pyrophosphate enzyme, central domain M1F28_02900 PF10369 Small subunit of acetolactate synthase M1F28_02905 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain M1F28_02905 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain M1F28_02910 PF10415 Fumarase C C-terminus M1F28_02910 PF00206 Lyase M1F28_02925 PF01063 Amino-transferase class IV M1F28_02935 PF04055 Radical SAM superfamily M1F28_02940 PF01168 Alanine racemase, N-terminal domain M1F28_02945 PF00270 DEAD/DEAH box helicase M1F28_02945 PF08148 DSHCT (NUC185) domain M1F28_02945 PF00271 Helicase conserved C-terminal domain M1F28_02955 PF00534 Glycosyl transferases group 1 M1F28_02955 PF13439 Glycosyltransferase Family 4 M1F28_02960 PF12804 MobA-like NTP transferase domain M1F28_02965 PF04991 LicD family M1F28_02970 PF01501 Glycosyl transferase family 8 M1F28_02970 PF00535 Glycosyl transferase family 2 M1F28_02990 PF00535 Glycosyl transferase family 2 M1F28_03005 PF00535 Glycosyl transferase family 2 M1F28_03015 PF00535 Glycosyl transferase family 2 M1F28_03040 PF00929 Exonuclease M1F28_03065 PF00005 ABC transporter M1F28_03065 PF12848 ABC transporter M1F28_03075 PF02446 4-alpha-glucanotransferase M1F28_03085 PF13673 Acetyltransferase (GNAT) domain M1F28_03085 PF03352 Methyladenine glycosylase M1F28_03085 PF00117 Glutamine amidotransferase class-I M1F28_03085 PF00958 GMP synthase C terminal domain M1F28_03085 PF13302 Acetyltransferase (GNAT) domain M1F28_03090 PF11838 ERAP1-like C-terminal domain M1F28_03090 PF01433 Peptidase family M1 domain M1F28_03095 PF05661 Protein of unknown function (DUF808) M1F28_03100 PF01431 Peptidase family M13 M1F28_03100 PF05649 Peptidase family M13 M1F28_03105 PF02502 Ribose/Galactose Isomerase M1F28_03110 PF00132 Bacterial transferase hexapeptide (six repeats) M1F28_03115 PF00291 Pyridoxal-phosphate dependent enzyme M1F28_03120 PF01205 Uncharacterized protein family UPF0029 M1F28_03120 PF09186 Domain of unknown function (DUF1949) M1F28_03125 PF01783 Ribosomal L32p protein family M1F28_03135 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1F28_03135 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M1F28_03150 PF00005 ABC transporter M1F28_03150 PF16326 ABC transporter C-terminal domain M1F28_03150 PF12848 ABC transporter M1F28_03165 PF00356 Bacterial regulatory proteins, lacI family M1F28_03170 PF00703 Glycosyl hydrolases family 2 M1F28_03170 PF02836 Glycosyl hydrolases family 2, TIM barrel domain M1F28_03170 PF02837 Glycosyl hydrolases family 2, sugar binding domain M1F28_03180 PF00933 Glycosyl hydrolase family 3 N terminal domain M1F28_03190 PF00248 Aldo/keto reductase family M1F28_03195 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M1F28_03195 PF05698 Bacterial trigger factor protein (TF) C-terminus M1F28_03195 PF05697 Bacterial trigger factor protein (TF) M1F28_03200 PF00574 Clp protease M1F28_03205 PF00574 Clp protease M1F28_03210 PF10431 C-terminal, D2-small domain, of ClpB protein M1F28_03210 PF07724 AAA domain (Cdc48 subfamily) M1F28_03210 PF06689 ClpX C4-type zinc finger M1F28_03215 PF02153 Prephenate dehydrogenase M1F28_03215 PF01817 Chorismate mutase type II M1F28_03220 PF00501 AMP-binding enzyme M1F28_03225 PF08264 Anticodon-binding domain of tRNA M1F28_03225 PF00133 tRNA synthetases class I (I, L, M and V) M1F28_03235 PF14748 Pyrroline-5-carboxylate reductase dimerisation M1F28_03235 PF03807 NADP oxidoreductase coenzyme F420-dependent M1F28_03250 PF08264 Anticodon-binding domain of tRNA M1F28_03250 PF00133 tRNA synthetases class I (I, L, M and V) M1F28_03255 PF08245 Mur ligase middle domain M1F28_03255 PF02875 Mur ligase family, glutamate ligase domain M1F28_03260 PF00334 Nucleoside diphosphate kinase M1F28_03265 PF02463 RecF/RecN/SMC N terminal domain M1F28_03265 PF06470 SMC proteins Flexible Hinge Domain M1F28_03275 PF01289 Thiol-activated cytolysin M1F28_03275 PF17440 Thiol-activated cytolysin beta sandwich domain M1F28_03280 PF00448 SRP54-type protein, GTPase domain M1F28_03280 PF02881 SRP54-type protein, helical bundle domain M1F28_03285 PF02978 Signal peptide binding domain M1F28_03285 PF02881 SRP54-type protein, helical bundle domain M1F28_03285 PF00448 SRP54-type protein, GTPase domain M1F28_03290 PF01979 Amidohydrolase family M1F28_03300 PF01545 Cation efflux family M1F28_03300 PF16916 Dimerisation domain of Zinc Transporter M1F28_03305 PF00886 Ribosomal protein S16 M1F28_03315 PF01782 RimM N-terminal domain M1F28_03315 PF05239 PRC-barrel domain M1F28_03320 PF01746 tRNA (Guanine-1)-methyltransferase M1F28_03325 PF01245 Ribosomal protein L19 M1F28_03330 PF10502 Signal peptidase, peptidase S26 M1F28_03335 PF01351 Ribonuclease HII M1F28_03340 PF10611 Protein of unknown function (DUF2469) M1F28_03345 PF02021 Uncharacterised protein family UPF0102 M1F28_03350 PF01078 Magnesium chelatase, subunit ChlI M1F28_03350 PF13335 Magnesium chelatase, subunit ChlI C-terminal M1F28_03355 PF02481 DNA recombination-mediator protein A M1F28_03355 PF17782 DprA winged helix domain M1F28_03360 PF02899 Phage integrase, N-terminal SAM-like domain M1F28_03360 PF00589 Phage integrase family M1F28_03365 PF01551 Peptidase family M23 M1F28_03370 PF03458 UPF0126 domain M1F28_03375 PF00318 Ribosomal protein S2 M1F28_03380 PF00889 Elongation factor TS M1F28_03385 PF01012 Electron transfer flavoprotein domain M1F28_03390 PF01012 Electron transfer flavoprotein domain M1F28_03390 PF00766 Electron transfer flavoprotein FAD-binding domain M1F28_03395 PF01494 FAD binding domain M1F28_03405 PF07690 Major Facilitator Superfamily M1F28_03415 PF00696 Amino acid kinase family M1F28_03420 PF01765 Ribosome recycling factor M1F28_03430 PF04055 Radical SAM superfamily M1F28_03440 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain M1F28_03440 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase M1F28_03440 PF13288 DXP reductoisomerase C-terminal domain M1F28_03445 PF17820 PDZ domain M1F28_03445 PF02163 Peptidase family M50 M1F28_03450 PF04551 GcpE protein M1F28_03460 PF04073 Aminoacyl-tRNA editing domain M1F28_03460 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M1F28_03460 PF03129 Anticodon binding domain M1F28_03470 PF17384 RimP C-terminal SH3 domain M1F28_03470 PF02576 RimP N-terminal domain M1F28_03475 PF08529 NusA N-terminal domain M1F28_03475 PF13184 NusA-like KH domain M1F28_03485 PF04760 Translation initiation factor IF-2, N-terminal region M1F28_03485 PF11987 Translation-initiation factor 2 M1F28_03485 PF00009 Elongation factor Tu GTP binding domain M1F28_03490 PF02033 Ribosome-binding factor A M1F28_03495 PF16198 tRNA pseudouridylate synthase B C-terminal domain M1F28_03495 PF09142 tRNA Pseudouridine synthase II, C terminal M1F28_03495 PF01509 TruB family pseudouridylate synthase (N terminal domain) M1F28_03500 PF00512 His Kinase A (phospho-acceptor) domain M1F28_03500 PF00989 PAS fold M1F28_03500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1F28_03505 PF00072 Response regulator receiver domain M1F28_03505 PF00486 Transcriptional regulatory protein, C terminal M1F28_03510 PF07690 Major Facilitator Superfamily M1F28_03520 PF00005 ABC transporter M1F28_03520 PF08402 TOBE domain M1F28_03540 PF01687 Riboflavin kinase M1F28_03540 PF06574 FAD synthetase M1F28_03550 PF00005 ABC transporter M1F28_03560 PF00312 Ribosomal protein S15 M1F28_03565 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain M1F28_03565 PF00575 S1 RNA binding domain M1F28_03565 PF01138 3' exoribonuclease family, domain 1 M1F28_03565 PF00013 KH domain M1F28_03570 PF00675 Insulinase (Peptidase family M16) M1F28_03570 PF05193 Peptidase M16 inactive domain M1F28_03575 PF05173 Dihydrodipicolinate reductase, C-terminus M1F28_03575 PF01113 Dihydrodipicolinate reductase, N-terminus M1F28_03580 PF12419 SNF2 Helicase protein M1F28_03580 PF00271 Helicase conserved C-terminal domain M1F28_03580 PF00176 SNF2 family N-terminal domain M1F28_03590 PF00701 Dihydrodipicolinate synthetase family M1F28_03595 PF12706 Beta-lactamase superfamily domain M1F28_03595 PF17770 Ribonuclease J C-terminal domain M1F28_03595 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain M1F28_03600 PF01580 FtsK/SpoIIIE family M1F28_03600 PF09397 Ftsk gamma domain M1F28_03600 PF17854 FtsK alpha domain M1F28_03610 PF01066 CDP-alcohol phosphatidyltransferase M1F28_03615 PF00994 Probable molybdopterin binding domain M1F28_03615 PF02464 Competence-damaged protein M1F28_03615 PF18146 Damage-inducible protein CinA KH domain M1F28_03630 PF00154 recA bacterial DNA recombination protein M1F28_03635 PF02631 RecX family M1F28_03640 PF00919 Uncharacterized protein family UPF0004 M1F28_03640 PF04055 Radical SAM superfamily M1F28_03650 PF05175 Methyltransferase small domain M1F28_03650 PF08468 Methyltransferase small domain N-terminal M1F28_03655 PF13167 GTP-binding GTPase N-terminal M1F28_03655 PF16360 GTP-binding GTPase Middle Region M1F28_03655 PF01926 50S ribosome-binding GTPase M1F28_03660 PF13307 Helicase C-terminal domain M1F28_03665 PF01726 LexA DNA binding domain M1F28_03665 PF00717 Peptidase S24-like M1F28_03675 PF03477 ATP cone domain M1F28_03680 PF00501 AMP-binding enzyme M1F28_03680 PF13193 AMP-binding enzyme C-terminal domain M1F28_03685 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M1F28_03685 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M1F28_03705 PF00817 impB/mucB/samB family M1F28_03705 PF11799 impB/mucB/samB family C-terminal domain M1F28_03715 PF02381 MraZ protein, putative antitoxin-like M1F28_03720 PF01795 MraW methylase family M1F28_03730 PF03717 Penicillin-binding Protein dimerisation domain M1F28_03730 PF00905 Penicillin binding protein transpeptidase domain M1F28_03735 PF08245 Mur ligase middle domain M1F28_03735 PF01225 Mur ligase family, catalytic domain M1F28_03735 PF02875 Mur ligase family, glutamate ligase domain M1F28_03740 PF01225 Mur ligase family, catalytic domain M1F28_03740 PF02875 Mur ligase family, glutamate ligase domain M1F28_03740 PF08245 Mur ligase middle domain M1F28_03745 PF00953 Glycosyl transferase family 4 M1F28_03745 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 M1F28_03750 PF02875 Mur ligase family, glutamate ligase domain M1F28_03750 PF08245 Mur ligase middle domain M1F28_03755 PF01098 Cell cycle protein M1F28_03760 PF04101 Glycosyltransferase family 28 C-terminal domain M1F28_03760 PF03033 Glycosyltransferase family 28 N-terminal domain M1F28_03765 PF01225 Mur ligase family, catalytic domain M1F28_03765 PF08245 Mur ligase middle domain M1F28_03765 PF02875 Mur ligase family, glutamate ligase domain M1F28_03775 PF12327 FtsZ family, C-terminal domain M1F28_03775 PF00091 Tubulin/FtsZ family, GTPase domain M1F28_03780 PF02578 Multi-copper polyphenol oxidoreductase laccase M1F28_03785 PF04472 Cell division protein SepF M1F28_03800 PF01252 Signal peptidase (SPase) II M1F28_03805 PF00849 RNA pseudouridylate synthase M1F28_03815 PF02811 PHP domain M1F28_03815 PF07733 Bacterial DNA polymerase III alpha NTPase domain M1F28_03815 PF17657 Bacterial DNA polymerase III alpha subunit finger domain M1F28_03815 PF14579 Helix-hairpin-helix motif M1F28_03830 PF01475 Ferric uptake regulator family M1F28_03835 PF00950 ABC 3 transport family M1F28_03840 PF00005 ABC transporter M1F28_03850 PF03129 Anticodon binding domain M1F28_03850 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M1F28_03860 PF01207 Dihydrouridine synthase (Dus) M1F28_03870 PF01966 HD domain M1F28_03870 PF13286 Phosphohydrolase-associated domain M1F28_03875 PF08275 DNA primase catalytic core, N-terminal domain M1F28_03875 PF10410 DnaB-helicase binding domain of primase M1F28_03875 PF01807 CHC2 zinc finger M1F28_03875 PF08278 DNA primase DnaG DnaB-binding M1F28_03875 PF13662 Toprim domain M1F28_03885 PF00902 Sec-independent protein translocase protein (TatC) M1F28_03890 PF02416 mttA/Hcf106 family M1F28_03895 PF02416 mttA/Hcf106 family M1F28_03925 PF01032 FecCD transport family M1F28_03930 PF00005 ABC transporter M1F28_03960 PF01327 Polypeptide deformylase M1F28_03965 PF01370 NAD dependent epimerase/dehydratase family M1F28_03965 PF08338 Domain of unknown function (DUF1731) M1F28_03985 PF01300 Telomere recombination M1F28_03990 PF13419 Haloacid dehalogenase-like hydrolase M1F28_03995 PF00664 ABC transporter transmembrane region M1F28_03995 PF00005 ABC transporter M1F28_04000 PF00664 ABC transporter transmembrane region M1F28_04000 PF00005 ABC transporter M1F28_04005 PF00456 Transketolase, thiamine diphosphate binding domain M1F28_04005 PF17831 Pyruvate dehydrogenase E1 component middle domain M1F28_04030 PF02537 CrcB-like protein, Camphor Resistance (CrcB) M1F28_04035 PF02537 CrcB-like protein, Camphor Resistance (CrcB) M1F28_04040 PF01784 NIF3 (NGG1p interacting factor 3) M1F28_04060 PF00480 ROK family M1F28_04065 PF00557 Metallopeptidase family M24 M1F28_04075 PF00120 Glutamine synthetase, catalytic domain M1F28_04075 PF03951 Glutamine synthetase, beta-Grasp domain M1F28_04080 PF08335 GlnD PII-uridylyltransferase M1F28_04080 PF03710 Glutamate-ammonia ligase adenylyltransferase M1F28_04090 PF00120 Glutamine synthetase, catalytic domain M1F28_04090 PF03951 Glutamine synthetase, beta-Grasp domain M1F28_04110 PF02817 e3 binding domain M1F28_04110 PF00364 Biotin-requiring enzyme M1F28_04110 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M1F28_04115 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M1F28_04115 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1F28_04125 PF00883 Cytosol aminopeptidase family, catalytic domain M1F28_04125 PF02789 Cytosol aminopeptidase family, N-terminal domain M1F28_04140 PF07687 Peptidase dimerisation domain M1F28_04140 PF01546 Peptidase family M20/M25/M40 M1F28_04150 PF01521 Iron-sulphur cluster biosynthesis M1F28_04160 PF02777 Iron/manganese superoxide dismutases, C-terminal domain M1F28_04160 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain M1F28_04170 PF01541 GIY-YIG catalytic domain M1F28_04170 PF00929 Exonuclease M1F28_04180 PF00365 Phosphofructokinase M1F28_04185 PF01474 Class-II DAHP synthetase family M1F28_04190 PF03793 PASTA domain M1F28_04190 PF00069 Protein kinase domain M1F28_04195 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain M1F28_04195 PF01464 Transglycosylase SLT domain M1F28_04205 PF00348 Polyprenyl synthetase M1F28_04220 PF00140 Sigma-70 factor, region 1.2 M1F28_04220 PF04542 Sigma-70 region 2 M1F28_04220 PF04539 Sigma-70 region 3 M1F28_04220 PF04545 Sigma-70, region 4 M1F28_04225 PF13307 Helicase C-terminal domain M1F28_04225 PF04851 Type III restriction enzyme, res subunit M1F28_04225 PF00929 Exonuclease M1F28_04235 PF00204 DNA gyrase B M1F28_04235 PF00986 DNA gyrase B subunit, carboxyl terminus M1F28_04235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1F28_04235 PF01751 Toprim domain M1F28_04250 PF03989 DNA gyrase C-terminal domain, beta-propeller M1F28_04250 PF00521 DNA gyrase/topoisomerase IV, subunit A M1F28_04285 PF02254 TrkA-N domain M1F28_04285 PF02080 TrkA-C domain M1F28_04290 PF02254 TrkA-N domain M1F28_04290 PF02080 TrkA-C domain M1F28_04300 PF05958 tRNA (Uracil-5-)-methyltransferase M1F28_04305 PF00330 Aconitase family (aconitate hydratase) M1F28_04305 PF00694 Aconitase C-terminal domain M1F28_04315 PF13292 1-deoxy-D-xylulose-5-phosphate synthase M1F28_04315 PF02779 Transketolase, pyrimidine binding domain M1F28_04315 PF02780 Transketolase, C-terminal domain M1F28_04330 PF00128 Alpha amylase, catalytic domain M1F28_04330 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) M1F28_04335 PF00128 Alpha amylase, catalytic domain M1F28_04340 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) M1F28_04340 PF00128 Alpha amylase, catalytic domain M1F28_04395 PF00196 Bacterial regulatory proteins, luxR family M1F28_04395 PF00072 Response regulator receiver domain M1F28_04400 PF03315 Serine dehydratase beta chain M1F28_04400 PF03313 Serine dehydratase alpha chain M1F28_04405 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M1F28_04405 PF03129 Anticodon binding domain M1F28_04405 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain M1F28_04410 PF01066 CDP-alcohol phosphatidyltransferase M1F28_04420 PF13439 Glycosyltransferase Family 4 M1F28_04430 PF00293 NUDIX domain M1F28_04435 PF01709 Transcriptional regulator M1F28_04440 PF02075 Crossover junction endodeoxyribonuclease RuvC M1F28_04445 PF07499 RuvA, C-terminal domain M1F28_04445 PF01330 RuvA N terminal domain M1F28_04450 PF05491 RuvB C-terminal winged helix domain M1F28_04450 PF05496 Holliday junction DNA helicase RuvB P-loop domain M1F28_04450 PF17864 RuvB AAA lid domain M1F28_04460 PF07549 SecD/SecF GG Motif M1F28_04460 PF02355 Protein export membrane protein M1F28_04465 PF07549 SecD/SecF GG Motif M1F28_04465 PF02355 Protein export membrane protein M1F28_04470 PF00156 Phosphoribosyl transferase domain M1F28_04475 PF13291 ACT domain M1F28_04475 PF02824 TGS domain M1F28_04475 PF04607 Region found in RelA / SpoT proteins M1F28_04485 PF03993 Domain of Unknown Function (DUF349) M1F28_04490 PF00753 Metallo-beta-lactamase superfamily M1F28_04495 PF03129 Anticodon binding domain M1F28_04495 PF13393 Histidyl-tRNA synthetase M1F28_04500 PF07650 KH domain M1F28_04500 PF01926 50S ribosome-binding GTPase M1F28_04505 PF07650 KH domain M1F28_04505 PF01926 50S ribosome-binding GTPase M1F28_04515 PF03880 DbpA RNA binding domain M1F28_04515 PF00270 DEAD/DEAH box helicase M1F28_04515 PF00271 Helicase conserved C-terminal domain M1F28_04525 PF02938 GAD domain M1F28_04525 PF00152 tRNA synthetases class II (D, K and N) M1F28_04525 PF01336 OB-fold nucleic acid binding domain M1F28_04540 PF03176 MMPL family M1F28_04545 PF00004 ATPase family associated with various cellular activities (AAA) M1F28_04545 PF16193 AAA C-terminal domain M1F28_04545 PF12002 MgsA AAA+ ATPase C terminal M1F28_04550 PF01479 S4 domain M1F28_04550 PF00163 Ribosomal protein S4/S9 N-terminal domain M1F28_04560 PF01411 tRNA synthetases class II (A) M1F28_04560 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain M1F28_04560 PF02272 DHHA1 domain M1F28_04565 PF03652 Holliday junction resolvase M1F28_04585 PF01264 Chorismate synthase M1F28_04590 PF01202 Shikimate kinase M1F28_04590 PF01761 3-dehydroquinate synthase M1F28_04595 PF01202 Shikimate kinase M1F28_04600 PF00403 Heavy-metal-associated domain M1F28_04605 PF01132 Elongation factor P (EF-P) OB domain M1F28_04605 PF08207 Elongation factor P (EF-P) KOW-like domain M1F28_04605 PF09285 Elongation factor P, C-terminal M1F28_04610 PF01029 NusB family M1F28_04615 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain M1F28_04615 PF00117 Glutamine amidotransferase class-I M1F28_04620 PF02142 MGS-like domain M1F28_04620 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M1F28_04620 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain M1F28_04630 PF00625 Guanylate kinase M1F28_04635 PF01192 RNA polymerase Rpb6 M1F28_04640 PF02441 Flavoprotein M1F28_04640 PF04127 DNA / pantothenate metabolism flavoprotein M1F28_04645 PF00438 S-adenosylmethionine synthetase, N-terminal domain M1F28_04645 PF02772 S-adenosylmethionine synthetase, central domain M1F28_04645 PF02773 S-adenosylmethionine synthetase, C-terminal domain M1F28_04650 PF17764 3′ DNA-binding domain (3′BD) M1F28_04655 PF00551 Formyl transferase M1F28_04655 PF02911 Formyl transferase, C-terminal domain M1F28_04660 PF01029 NusB family M1F28_04660 PF01189 16S rRNA methyltransferase RsmB/F M1F28_04665 PF00834 Ribulose-phosphate 3 epimerase family M1F28_04670 PF00528 Binding-protein-dependent transport system inner membrane component M1F28_04675 PF09084 NMT1/THI5 like M1F28_04680 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase M1F28_04685 PF01634 ATP phosphoribosyltransferase M1F28_04685 PF08029 HisG, C-terminal domain M1F28_04710 PF00781 Diacylglycerol kinase catalytic domain M1F28_04715 PF00271 Helicase conserved C-terminal domain M1F28_04715 PF08148 DSHCT (NUC185) domain M1F28_04715 PF00270 DEAD/DEAH box helicase M1F28_04720 PF00795 Carbon-nitrogen hydrolase M1F28_04720 PF00535 Glycosyl transferase family 2 M1F28_04725 PF00535 Glycosyl transferase family 2 M1F28_04730 PF13397 RNA polymerase-binding protein M1F28_04740 PF13411 MerR HTH family regulatory protein M1F28_04750 PF00498 FHA domain M1F28_04755 PF01433 Peptidase family M1 domain M1F28_04755 PF11838 ERAP1-like C-terminal domain M1F28_04765 PF00365 Phosphofructokinase M1F28_04770 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal M1F28_04770 PF01926 50S ribosome-binding GTPase M1F28_04775 PF02224 Cytidylate kinase M1F28_04785 PF00849 RNA pseudouridylate synthase M1F28_04785 PF01479 S4 domain M1F28_04790 PF04079 Segregation and condensation complex subunit ScpB M1F28_04795 PF02616 Segregation and condensation protein ScpA M1F28_04800 PF13614 AAA domain M1F28_04805 PF00589 Phage integrase family M1F28_04805 PF02899 Phage integrase, N-terminal SAM-like domain M1F28_04810 PF02779 Transketolase, pyrimidine binding domain M1F28_04810 PF02780 Transketolase, C-terminal domain M1F28_04810 PF00456 Transketolase, thiamine diphosphate binding domain M1F28_04815 PF00923 Transaldolase/Fructose-6-phosphate aldolase M1F28_04820 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain M1F28_04820 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain M1F28_04830 PF03840 Preprotein translocase SecG subunit M1F28_04835 PF00121 Triosephosphate isomerase M1F28_04840 PF00162 Phosphoglycerate kinase M1F28_04845 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain M1F28_04845 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain M1F28_04850 PF14527 WhiA LAGLIDADG-like domain M1F28_04850 PF10298 WhiA N-terminal LAGLIDADG-like domain M1F28_04850 PF02650 WhiA C-terminal HTH domain M1F28_04855 PF01933 Uncharacterised protein family UPF0052 M1F28_04860 PF03668 P-loop ATPase protein family M1F28_04865 PF08459 UvrC Helix-hairpin-helix N-terminal M1F28_04865 PF01541 GIY-YIG catalytic domain M1F28_04865 PF02151 UvrB/uvrC motif M1F28_04870 PF00005 ABC transporter M1F28_04870 PF17760 UvrA interaction domain M1F28_04870 PF17755 UvrA DNA-binding domain M1F28_04880 PF13593 SBF-like CPA transporter family (DUF4137) M1F28_04885 PF03741 Integral membrane protein TerC family M1F28_04890 PF00271 Helicase conserved C-terminal domain M1F28_04890 PF04851 Type III restriction enzyme, res subunit M1F28_04890 PF02151 UvrB/uvrC motif M1F28_04890 PF12344 Ultra-violet resistance protein B M1F28_04890 PF17757 UvrB interaction domain M1F28_04895 PF01121 Dephospho-CoA kinase M1F28_04900 PF01470 Pyroglutamyl peptidase M1F28_04905 PF00005 ABC transporter M1F28_04915 PF00575 S1 RNA binding domain M1F28_04920 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain M1F28_04920 PF00476 DNA polymerase family A M1F28_04920 PF01367 5'-3' exonuclease, C-terminal SAM fold M1F28_04930 PF03861 ANTAR domain M1F28_04930 PF00072 Response regulator receiver domain M1F28_04940 PF02887 Pyruvate kinase, alpha/beta domain M1F28_04940 PF00224 Pyruvate kinase, barrel domain M1F28_04945 PF01790 Prolipoprotein diacylglyceryl transferase M1F28_04950 PF00218 Indole-3-glycerol phosphate synthase M1F28_04955 PF01502 Phosphoribosyl-AMP cyclohydrolase M1F28_04960 PF00977 Histidine biosynthesis protein M1F28_04975 PF03136 Pup-ligase protein M1F28_04980 PF05639 Pup-like protein M1F28_04985 PF03136 Pup-ligase protein M1F28_04990 PF00004 ATPase family associated with various cellular activities (AAA) M1F28_04990 PF17758 Proteasomal ATPase OB N-terminal domain M1F28_04990 PF16450 Proteasomal ATPase OB C-terminal domain M1F28_04995 PF08704 tRNA methyltransferase complex GCD14 subunit M1F28_05005 PF13419 Haloacid dehalogenase-like hydrolase M1F28_05010 PF02673 Bacitracin resistance protein BacA M1F28_05025 PF01546 Peptidase family M20/M25/M40 M1F28_05025 PF07687 Peptidase dimerisation domain M1F28_05030 PF04107 Glutamate-cysteine ligase family 2(GCS2) M1F28_05035 PF02540 NAD synthase M1F28_05035 PF00958 GMP synthase C terminal domain M1F28_05035 PF00117 Glutamine amidotransferase class-I M1F28_05040 PF18317 Shikimate 5'-dehydrogenase C-terminal domain M1F28_05040 PF08501 Shikimate dehydrogenase substrate binding domain M1F28_05060 PF01336 OB-fold nucleic acid binding domain M1F28_05060 PF02811 PHP domain M1F28_05060 PF14579 Helix-hairpin-helix motif M1F28_05060 PF17657 Bacterial DNA polymerase III alpha subunit finger domain M1F28_05060 PF07733 Bacterial DNA polymerase III alpha NTPase domain M1F28_05075 PF01161 Phosphatidylethanolamine-binding protein M1F28_05080 PF00588 SpoU rRNA Methylase family M1F28_05095 PF00588 SpoU rRNA Methylase family M1F28_05100 PF01145 SPFH domain / Band 7 family M1F28_05110 PF00005 ABC transporter M1F28_05115 PF13439 Glycosyltransferase Family 4 M1F28_05115 PF00534 Glycosyl transferases group 1 M1F28_05120 PF00483 Nucleotidyl transferase M1F28_05125 PF12704 MacB-like periplasmic core domain M1F28_05125 PF02687 FtsX-like permease family M1F28_05125 PF00005 ABC transporter M1F28_05140 PF00300 Histidine phosphatase superfamily (branch 1) M1F28_05145 PF00005 ABC transporter M1F28_05145 PF12848 ABC transporter M1F28_05150 PF00581 Rhodanese-like domain M1F28_05155 PF01883 Iron-sulfur cluster assembly protein M1F28_05165 PF00266 Aminotransferase class-V M1F28_05170 PF00005 ABC transporter M1F28_05175 PF00355 Rieske [2Fe-2S] domain M1F28_05180 PF01458 Uncharacterized protein family (UPF0051) M1F28_05185 PF01458 Uncharacterized protein family (UPF0051) M1F28_05200 PF03023 Lipid II flippase MurJ M1F28_05220 PF02463 RecF/RecN/SMC N terminal domain M1F28_05225 PF01513 ATP-NAD kinase M1F28_05230 PF01479 S4 domain M1F28_05230 PF01728 FtsJ-like methyltransferase M1F28_05240 PF13344 Haloacid dehalogenase-like hydrolase M1F28_05240 PF18407 GCN5-related N-acetyltransferase like domain M1F28_05270 PF00950 ABC 3 transport family M1F28_05275 PF00950 ABC 3 transport family M1F28_05280 PF00005 ABC transporter M1F28_05285 PF01297 Zinc-uptake complex component A periplasmic M1F28_05290 PF00579 tRNA synthetases class I (W and Y) M1F28_05295 PF00005 ABC transporter M1F28_05305 PF01381 Helix-turn-helix M1F28_05315 PF16363 GDP-mannose 4,6 dehydratase M1F28_05320 PF01316 Arginine repressor, DNA binding domain M1F28_05320 PF02863 Arginine repressor, C-terminal domain M1F28_05325 PF00202 Aminotransferase class-III M1F28_05335 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus M1F28_05335 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus M1F28_05340 PF04073 Aminoacyl-tRNA editing domain M1F28_05345 PF03147 Ferredoxin-fold anticodon binding domain M1F28_05345 PF03484 tRNA synthetase B5 domain M1F28_05345 PF03483 B3/4 domain M1F28_05345 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain M1F28_05345 PF01588 Putative tRNA binding domain M1F28_05350 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain M1F28_05350 PF01409 tRNA synthetases class II core domain (F) M1F28_05355 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M1F28_05360 PF00588 SpoU rRNA Methylase family M1F28_05360 PF08032 RNA 2'-O ribose methyltransferase substrate binding M1F28_05370 PF00453 Ribosomal protein L20 M1F28_05375 PF01632 Ribosomal protein L35 M1F28_05380 PF00707 Translation initiation factor IF-3, C-terminal domain M1F28_05380 PF05198 Translation initiation factor IF-3, N-terminal domain M1F28_05390 PF00977 Histidine biosynthesis protein M1F28_05395 PF00117 Glutamine amidotransferase class-I M1F28_05405 PF00475 Imidazoleglycerol-phosphate dehydratase M1F28_05410 PF00155 Aminotransferase class I and II M1F28_05415 PF00815 Histidinol dehydrogenase M1F28_05420 PF01255 Putative undecaprenyl diphosphate synthase M1F28_05425 PF11967 Recombination protein O N terminal M1F28_05425 PF02565 Recombination protein O C terminal M1F28_05430 PF08502 LeuA allosteric (dimerisation) domain M1F28_05430 PF00682 HMGL-like M1F28_05435 PF13191 AAA ATPase domain M1F28_05435 PF00069 Protein kinase domain M1F28_05455 PF07650 KH domain M1F28_05455 PF01926 50S ribosome-binding GTPase M1F28_05460 PF00571 CBS domain M1F28_05460 PF03471 Transporter associated domain M1F28_05460 PF01595 Cyclin M transmembrane N-terminal domain M1F28_05465 PF02130 Uncharacterized protein family UPF0054 M1F28_05470 PF02562 PhoH-like protein M1F28_05475 PF04452 RNA methyltransferase M1F28_05480 PF00684 DnaJ central domain M1F28_05480 PF00226 DnaJ domain M1F28_05480 PF01556 DnaJ C terminal domain M1F28_05485 PF01628 HrcA protein C terminal domain M1F28_05485 PF08220 DeoR-like helix-turn-helix domain M1F28_05500 PF04055 Radical SAM superfamily M1F28_05505 PF02390 Putative methyltransferase M1F28_05510 PF00009 Elongation factor Tu GTP binding domain M1F28_05510 PF06421 GTP-binding protein LepA C-terminus M1F28_05510 PF00679 Elongation factor G C-terminus M1F28_05535 PF01649 Ribosomal protein S20 M1F28_05545 PF02233 NAD(P) transhydrogenase beta subunit M1F28_05550 PF01262 Alanine dehydrogenase/PNT, C-terminal domain M1F28_05550 PF05222 Alanine dehydrogenase/PNT, N-terminal domain M1F28_05550 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch M1F28_05570 PF05872 Bacterial protein of unknown function (DUF853) M1F28_05585 PF08264 Anticodon-binding domain of tRNA M1F28_05585 PF13603 Leucyl-tRNA synthetase, Domain 2 M1F28_05585 PF09334 tRNA synthetases class I (M) M1F28_05590 PF01230 HIT domain M1F28_05605 PF01594 AI-2E family transporter M1F28_05610 PF01048 Phosphorylase superfamily M1F28_05615 PF02742 Iron dependent repressor, metal binding and dimerisation domain M1F28_05615 PF00950 ABC 3 transport family M1F28_05620 PF00265 Thymidine kinase M1F28_05630 PF01022 Bacterial regulatory protein, arsR family M1F28_05640 PF01297 Zinc-uptake complex component A periplasmic M1F28_05650 PF00005 ABC transporter M1F28_05655 PF00950 ABC 3 transport family M1F28_05660 PF00294 pfkB family carbohydrate kinase M1F28_05675 PF01569 PAP2 superfamily M1F28_05695 PF00324 Amino acid permease M1F28_05700 PF05681 Fumarate hydratase (Fumerase) M1F28_05700 PF05683 Fumarase C-terminus M1F28_05705 PF00005 ABC transporter M1F28_05705 PF09383 NIL domain M1F28_05710 PF00528 Binding-protein-dependent transport system inner membrane component M1F28_05715 PF03180 NLPA lipoprotein M1F28_05720 PF00324 Amino acid permease M1F28_05730 PF03591 AzlC protein M1F28_05735 PF00392 Bacterial regulatory proteins, gntR family M1F28_05735 PF07729 FCD domain M1F28_05740 PF07690 Major Facilitator Superfamily M1F28_05745 PF01156 Inosine-uridine preferring nucleoside hydrolase M1F28_05750 PF01136 Peptidase family U32 M1F28_05750 PF16325 Peptidase family U32 C-terminal domain M1F28_05755 PF01174 SNO glutamine amidotransferase family M1F28_05760 PF01680 SOR/SNZ family M1F28_05765 PF00392 Bacterial regulatory proteins, gntR family M1F28_05790 PF00746 LPXTG cell wall anchor motif M1F28_05790 PF16555 Gram-positive pilin subunit D1, N-terminal domain M1F28_05805 PF01522 Polysaccharide deacetylase M1F28_05815 PF00356 Bacterial regulatory proteins, lacI family M1F28_05820 PF05025 RbsD / FucU transport protein family M1F28_05825 PF07690 Major Facilitator Superfamily M1F28_05830 PF00596 Class II Aldolase and Adducin N-terminal domain M1F28_05840 PF02952 L-fucose isomerase, C-terminal domain M1F28_05840 PF07881 L-fucose isomerase, first N-terminal domain M1F28_05840 PF07882 L-fucose isomerase, second N-terminal domain M1F28_05860 PF00300 Histidine phosphatase superfamily (branch 1) M1F28_05875 PF01467 Cytidylyltransferase-like M1F28_05880 PF00085 Thioredoxin M1F28_05890 PF09269 Domain of unknown function (DUF1967) M1F28_05890 PF01018 GTP1/OBG M1F28_05890 PF01926 50S ribosome-binding GTPase M1F28_05895 PF01016 Ribosomal L27 protein M1F28_05900 PF00829 Ribosomal prokaryotic L21 protein M1F28_05905 PF10150 Ribonuclease E/G family M1F28_05910 PF01654 Cytochrome bd terminal oxidase subunit I M1F28_05915 PF02322 Cytochrome bd terminal oxidase subunit II M1F28_05920 PF00664 ABC transporter transmembrane region M1F28_05920 PF00005 ABC transporter M1F28_05925 PF00005 ABC transporter M1F28_05925 PF00664 ABC transporter transmembrane region M1F28_05930 PF13185 GAF domain M1F28_05930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1F28_05930 PF07730 Histidine kinase M1F28_05935 PF00664 ABC transporter transmembrane region M1F28_05935 PF00005 ABC transporter M1F28_05940 PF00664 ABC transporter transmembrane region M1F28_05940 PF00005 ABC transporter M1F28_05945 PF10417 C-terminal domain of 1-Cys peroxiredoxin M1F28_05945 PF00578 AhpC/TSA family M1F28_05950 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1F28_05950 PF13192 Thioredoxin domain M1F28_05955 PF00196 Bacterial regulatory proteins, luxR family M1F28_05955 PF00072 Response regulator receiver domain M1F28_05960 PF06827 Zinc finger found in FPG and IleRS M1F28_05960 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain M1F28_05960 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain M1F28_05965 PF00035 Double-stranded RNA binding motif M1F28_05965 PF14622 Ribonuclease-III-like M1F28_05970 PF02620 Large ribosomal RNA subunit accumulation protein YceD M1F28_05980 PF01467 Cytidylyltransferase-like M1F28_05990 PF00270 DEAD/DEAH box helicase M1F28_05990 PF00271 Helicase conserved C-terminal domain M1F28_05990 PF17191 RecG wedge domain M1F28_05995 PF00830 Ribosomal L28 family M1F28_06005 PF02769 AIR synthase related protein, C-terminal domain M1F28_06005 PF00586 AIR synthase related protein, N-terminal domain M1F28_06010 PF03358 NADPH-dependent FMN reductase M1F28_06015 PF07478 D-ala D-ala ligase C-terminus M1F28_06015 PF01820 D-ala D-ala ligase N-terminus M1F28_06020 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) M1F28_06030 PF03577 Peptidase family C69 M1F28_06040 PF00534 Glycosyl transferases group 1 M1F28_06040 PF13439 Glycosyltransferase Family 4 M1F28_06050 PF06800 Sugar transport protein M1F28_06055 PF01432 Peptidase family M3 M1F28_06080 PF00528 Binding-protein-dependent transport system inner membrane component M1F28_06085 PF00528 Binding-protein-dependent transport system inner membrane component M1F28_06090 PF00356 Bacterial regulatory proteins, lacI family M1F28_06100 PF00749 tRNA synthetases class I (E and Q), catalytic domain M1F28_06105 PF00155 Aminotransferase class I and II M1F28_06110 PF01557 Fumarylacetoacetate (FAA) hydrolase family M1F28_06115 PF00501 AMP-binding enzyme M1F28_06125 PF00578 AhpC/TSA family M1F28_06140 PF01725 Ham1 family M1F28_06145 PF03725 3' exoribonuclease family, domain 2 M1F28_06145 PF01138 3' exoribonuclease family, domain 1 M1F28_06150 PF12706 Beta-lactamase superfamily domain M1F28_06155 PF01177 Asp/Glu/Hydantoin racemase M1F28_06165 PF02617 ATP-dependent Clp protease adaptor protein ClpS M1F28_06170 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain M1F28_06170 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain M1F28_06175 PF04851 Type III restriction enzyme, res subunit M1F28_06185 PF00216 Bacterial DNA-binding protein M1F28_06190 PF06826 Predicted Permease Membrane Region M1F28_06190 PF02080 TrkA-C domain M1F28_06205 PF02540 NAD synthase M1F28_06220 PF02225 PA domain M1F28_06220 PF06280 Fn3-like domain M1F28_06220 PF00746 LPXTG cell wall anchor motif M1F28_06220 PF00082 Subtilase family M1F28_06230 PF00196 Bacterial regulatory proteins, luxR family M1F28_06230 PF00072 Response regulator receiver domain M1F28_06250 PF00005 ABC transporter M1F28_06250 PF02687 FtsX-like permease family M1F28_06250 PF12704 MacB-like periplasmic core domain M1F28_06255 PF00005 ABC transporter M1F28_06255 PF02687 FtsX-like permease family M1F28_06255 PF12704 MacB-like periplasmic core domain M1F28_06280 PF01047 MarR family M1F28_06285 PF00005 ABC transporter M1F28_06285 PF17760 UvrA interaction domain M1F28_06285 PF17755 UvrA DNA-binding domain M1F28_06290 PF00005 ABC transporter M1F28_06290 PF17755 UvrA DNA-binding domain M1F28_06290 PF17760 UvrA interaction domain M1F28_06310 PF02016 LD-carboxypeptidase N-terminal domain M1F28_06310 PF17676 LD-carboxypeptidase C-terminal domain M1F28_06315 PF13344 Haloacid dehalogenase-like hydrolase M1F28_06320 PF01668 SmpB protein M1F28_06330 PF02687 FtsX-like permease family M1F28_06330 PF18075 FtsX extracellular domain M1F28_06335 PF00005 ABC transporter M1F28_06340 PF03462 PCRF domain M1F28_06340 PF00472 RF-1 domain M1F28_06375 PF00437 Type II/IV secretion system protein M1F28_06385 PF13361 UvrD-like helicase C-terminal domain M1F28_06385 PF00580 UvrD/REP helicase N-terminal domain M1F28_06400 PF00270 DEAD/DEAH box helicase M1F28_06400 PF00271 Helicase conserved C-terminal domain M1F28_06405 PF01914 MarC family integral membrane protein M1F28_06415 PF00557 Metallopeptidase family M24 M1F28_06415 PF05195 Aminopeptidase P, N-terminal domain M1F28_06420 PF01769 Divalent cation transporter M1F28_06420 PF00571 CBS domain M1F28_06420 PF03448 MgtE intracellular N domain M1F28_06430 PF10609 NUBPL iron-transfer P-loop NTPase M1F28_06430 PF01883 Iron-sulfur cluster assembly protein M1F28_06435 PF01596 O-methyltransferase M1F28_06445 PF03641 Possible lysine decarboxylase M1F28_06450 PF01048 Phosphorylase superfamily M1F28_06455 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M1F28_06455 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M1F28_06455 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M1F28_06455 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M1F28_06460 PF00440 Bacterial regulatory proteins, tetR family M1F28_06465 PF07690 Major Facilitator Superfamily M1F28_06470 PF01791 DeoC/LacD family aldolase M1F28_06480 PF00591 Glycosyl transferase family, a/b domain M1F28_06480 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain M1F28_06480 PF02885 Glycosyl transferase family, helical bundle domain M1F28_06485 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region M1F28_06490 PF02653 Branched-chain amino acid transport system / permease component M1F28_06495 PF02653 Branched-chain amino acid transport system / permease component M1F28_06500 PF00005 ABC transporter M1F28_06505 PF02608 ABC transporter substrate-binding protein PnrA-like M1F28_06510 PF01050 Mannose-6-phosphate isomerase M1F28_06510 PF00483 Nucleotidyl transferase M1F28_06525 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain M1F28_06525 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain M1F28_06530 PF00464 Serine hydroxymethyltransferase M1F28_06535 PF00551 Formyl transferase M1F28_06540 PF02632 BioY family M1F28_06545 PF01648 4'-phosphopantetheinyl transferase superfamily M1F28_06550 PF00698 Acyl transferase domain M1F28_06555 PF01039 Carboxyl transferase domain M1F28_06560 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M1F28_06560 PF00364 Biotin-requiring enzyme M1F28_06560 PF00289 Biotin carboxylase, N-terminal domain M1F28_06560 PF02785 Biotin carboxylase C-terminal domain M1F28_06570 PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase M1F28_06570 PF13088 BNR repeat-like domain M1F28_06570 PF00754 F5/8 type C domain M1F28_06580 PF01494 FAD binding domain M1F28_06585 PF01012 Electron transfer flavoprotein domain M1F28_06585 PF00766 Electron transfer flavoprotein FAD-binding domain M1F28_06600 PF00753 Metallo-beta-lactamase superfamily M1F28_06605 PF00083 Sugar (and other) transporter M1F28_06610 PF01575 MaoC like domain M1F28_06615 PF13193 AMP-binding enzyme C-terminal domain M1F28_06615 PF00501 AMP-binding enzyme M1F28_06620 PF02515 CoA-transferase family III M1F28_06625 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1F28_06625 PF02770 Acyl-CoA dehydrogenase, middle domain M1F28_06625 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1F28_06630 PF07859 alpha/beta hydrolase fold M1F28_06650 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain M1F28_06650 PF00056 lactate/malate dehydrogenase, NAD binding domain M1F28_06660 PF00342 Phosphoglucose isomerase M1F28_06665 PF00365 Phosphofructokinase M1F28_06675 PF01808 AICARFT/IMPCHase bienzyme M1F28_06675 PF02142 MGS-like domain M1F28_06690 PF02629 CoA binding domain M1F28_06690 PF00549 CoA-ligase M1F28_06695 PF00549 CoA-ligase M1F28_06695 PF08442 ATP-grasp domain M1F28_06700 PF01757 Acyltransferase family M1F28_06705 PF13361 UvrD-like helicase C-terminal domain M1F28_06705 PF00580 UvrD/REP helicase N-terminal domain M1F28_06715 PF02810 SEC-C motif M1F28_06715 PF07517 SecA DEAD-like domain M1F28_06715 PF01043 SecA preprotein cross-linking domain M1F28_06715 PF07516 SecA Wing and Scaffold domain M1F28_06745 PF00004 ATPase family associated with various cellular activities (AAA) M1F28_06745 PF07724 AAA domain (Cdc48 subfamily) M1F28_06745 PF17871 AAA lid domain M1F28_06745 PF02861 Clp amino terminal domain, pathogenicity island component M1F28_06745 PF10431 C-terminal, D2-small domain, of ClpB protein M1F28_06770 PF00679 Elongation factor G C-terminus M1F28_06770 PF03764 Elongation factor G, domain IV M1F28_06770 PF00009 Elongation factor Tu GTP binding domain M1F28_06770 PF14492 Elongation Factor G, domain II M1F28_06790 PF02899 Phage integrase, N-terminal SAM-like domain M1F28_06790 PF00589 Phage integrase family M1F28_06805 PF02540 NAD synthase M1F28_06805 PF00117 Glutamine amidotransferase class-I M1F28_06805 PF00958 GMP synthase C terminal domain M1F28_06810 PF00849 RNA pseudouridylate synthase M1F28_06815 PF07085 DRTGG domain M1F28_06815 PF01515 Phosphate acetyl/butaryl transferase M1F28_06820 PF00871 Acetokinase family M1F28_06835 PF00005 ABC transporter M1F28_06845 PF10415 Fumarase C C-terminus M1F28_06845 PF00206 Lyase M1F28_06850 PF00478 IMP dehydrogenase / GMP reductase domain M1F28_06860 PF00571 CBS domain M1F28_06860 PF00478 IMP dehydrogenase / GMP reductase domain M1F28_06865 PF02467 Transcription factor WhiB M1F28_06875 PF02769 AIR synthase related protein, C-terminal domain M1F28_06875 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain M1F28_06875 PF00586 AIR synthase related protein, N-terminal domain M1F28_06880 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain M1F28_06880 PF02843 Phosphoribosylglycinamide synthetase, C domain M1F28_06880 PF02844 Phosphoribosylglycinamide synthetase, N domain M1F28_06885 PF00586 AIR synthase related protein, N-terminal domain M1F28_06885 PF02769 AIR synthase related protein, C-terminal domain M1F28_06890 PF13537 Glutamine amidotransferase domain M1F28_06890 PF00156 Phosphoribosyl transferase domain M1F28_06895 PF01259 SAICAR synthetase M1F28_06900 PF00731 AIR carboxylase M1F28_06910 PF00166 Chaperonin 10 Kd subunit M1F28_06920 PF02535 ZIP Zinc transporter M1F28_06925 PF00814 Glycoprotease family M1F28_06930 PF00209 Sodium:neurotransmitter symporter family M1F28_06940 PF13085 2Fe-2S iron-sulfur cluster binding domain M1F28_06940 PF13183 4Fe-4S dicluster domain M1F28_06945 PF02910 Fumarate reductase flavoprotein C-term M1F28_06945 PF00890 FAD binding domain M1F28_06960 PF00814 Glycoprotease family M1F28_06970 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE M1F28_06975 PF00842 Alanine racemase, C-terminal domain M1F28_06975 PF01168 Alanine racemase, N-terminal domain M1F28_06980 PF01256 Carbohydrate kinase M1F28_06980 PF03853 YjeF-related protein N-terminus M1F28_06985 PF01380 SIS domain M1F28_06990 PF00485 Phosphoribulokinase / Uridine kinase family M1F28_06995 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M1F28_06995 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M1F28_06995 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M1F28_06995 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M1F28_07000 PF00380 Ribosomal protein S9/S16 M1F28_07005 PF00572 Ribosomal protein L13 M1F28_07015 PF07155 ECF-type riboflavin transporter, S component M1F28_07020 PF00005 ABC transporter M1F28_07020 PF12558 ATP-binding cassette cobalt transporter M1F28_07030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1F28_07030 PF03466 LysR substrate binding domain M1F28_07040 PF01416 tRNA pseudouridine synthase M1F28_07045 PF00480 ROK family M1F28_07055 PF00528 Binding-protein-dependent transport system inner membrane component M1F28_07060 PF00005 ABC transporter M1F28_07065 PF07739 TipAS antibiotic-recognition domain M1F28_07065 PF13411 MerR HTH family regulatory protein M1F28_07075 PF01196 Ribosomal protein L17 M1F28_07080 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain M1F28_07080 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain M1F28_07080 PF01000 RNA polymerase Rpb3/RpoA insert domain M1F28_07085 PF00411 Ribosomal protein S11 M1F28_07090 PF00416 Ribosomal protein S13/S18 M1F28_07095 PF00444 Ribosomal protein L36 M1F28_07100 PF01176 Translation initiation factor 1A / IF-1 M1F28_07105 PF00557 Metallopeptidase family M24 M1F28_07115 PF00344 SecY translocase M1F28_07120 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A M1F28_07125 PF00327 Ribosomal protein L30p/L7e M1F28_07130 PF03719 Ribosomal protein S5, C-terminal domain M1F28_07130 PF00333 Ribosomal protein S5, N-terminal domain M1F28_07135 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast M1F28_07140 PF00347 Ribosomal protein L6 M1F28_07145 PF00410 Ribosomal protein S8 M1F28_07150 PF00253 Ribosomal protein S14p/S29e M1F28_07155 PF00281 Ribosomal protein L5 M1F28_07155 PF00673 ribosomal L5P family C-terminus M1F28_07160 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 M1F28_07165 PF00238 Ribosomal protein L14p/L23e M1F28_07170 PF00366 Ribosomal protein S17 M1F28_07175 PF00831 Ribosomal L29 protein M1F28_07180 PF00252 Ribosomal protein L16p/L10e M1F28_07185 PF00189 Ribosomal protein S3, C-terminal domain M1F28_07185 PF07650 KH domain M1F28_07190 PF00237 Ribosomal protein L22p/L17e M1F28_07195 PF00203 Ribosomal protein S19 M1F28_07200 PF00181 Ribosomal Proteins L2, RNA binding domain M1F28_07200 PF03947 Ribosomal Proteins L2, C-terminal domain M1F28_07205 PF00276 Ribosomal protein L23 M1F28_07210 PF00573 Ribosomal protein L4/L1 family M1F28_07215 PF00297 Ribosomal protein L3 M1F28_07220 PF00338 Ribosomal protein S10p/S20e M1F28_07225 PF13419 Haloacid dehalogenase-like hydrolase M1F28_07230 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain M1F28_07230 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain M1F28_07235 PF00009 Elongation factor Tu GTP binding domain M1F28_07235 PF03144 Elongation factor Tu domain 2 M1F28_07235 PF03143 Elongation factor Tu C-terminal domain M1F28_07240 PF03764 Elongation factor G, domain IV M1F28_07240 PF00679 Elongation factor G C-terminus M1F28_07240 PF14492 Elongation Factor G, domain II M1F28_07240 PF03144 Elongation factor Tu domain 2 M1F28_07240 PF00009 Elongation factor Tu GTP binding domain M1F28_07245 PF00177 Ribosomal protein S7p/S5e M1F28_07250 PF00164 Ribosomal protein S12/S23 M1F28_07255 PF00324 Amino acid permease M1F28_07260 PF04998 RNA polymerase Rpb1, domain 5 M1F28_07260 PF05000 RNA polymerase Rpb1, domain 4 M1F28_07260 PF04983 RNA polymerase Rpb1, domain 3 M1F28_07260 PF00623 RNA polymerase Rpb1, domain 2 M1F28_07260 PF04997 RNA polymerase Rpb1, domain 1 M1F28_07265 PF00562 RNA polymerase Rpb2, domain 6 M1F28_07265 PF10385 RNA polymerase beta subunit external 1 domain M1F28_07265 PF04565 RNA polymerase Rpb2, domain 3 M1F28_07265 PF04561 RNA polymerase Rpb2, domain 2 M1F28_07265 PF04563 RNA polymerase beta subunit M1F28_07265 PF04560 RNA polymerase Rpb2, domain 7 M1F28_07270 PF00542 Ribosomal protein L7/L12 C-terminal domain M1F28_07270 PF16320 Ribosomal protein L7/L12 dimerisation domain M1F28_07275 PF00466 Ribosomal protein L10 M1F28_07280 PF00485 Phosphoribulokinase / Uridine kinase family M1F28_07285 PF00687 Ribosomal protein L1p/L10e family M1F28_07290 PF00298 Ribosomal protein L11, RNA binding domain M1F28_07290 PF03946 Ribosomal protein L11, N-terminal domain M1F28_07295 PF02357 Transcription termination factor nusG M1F28_07300 PF00584 SecE/Sec61-gamma subunits of protein translocation complex M1F28_07310 PF00155 Aminotransferase class I and II M1F28_07320 PF00962 Adenosine/AMP deaminase M1F28_07335 PF01565 FAD binding domain M1F28_07335 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain M1F28_07350 PF00471 Ribosomal protein L33 M1F28_07370 PF04461 Protein of unknown function (DUF520) M1F28_07375 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1F28_07380 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus M1F28_07380 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein M1F28_07385 PF00156 Phosphoribosyl transferase domain M1F28_07390 PF10647 Lipoprotein LpqB beta-propeller domain M1F28_07390 PF10646 Sporulation and spore germination M1F28_07395 PF00512 His Kinase A (phospho-acceptor) domain M1F28_07395 PF00672 HAMP domain M1F28_07395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1F28_07400 PF00072 Response regulator receiver domain M1F28_07400 PF00486 Transcriptional regulatory protein, C terminal M1F28_07420 PF07726 ATPase family associated with various cellular activities (AAA) M1F28_07420 PF17863 AAA lid domain M1F28_07460 PF02467 Transcription factor WhiB M1F28_07465 PF00459 Inositol monophosphatase family M1F28_07475 PF01758 Sodium Bile acid symporter family M1F28_07480 PF00483 Nucleotidyl transferase M1F28_07485 PF04321 RmlD substrate binding domain M1F28_07505 PF00535 Glycosyl transferase family 2 M1F28_07515 PF14524 Wzt C-terminal domain M1F28_07515 PF00005 ABC transporter M1F28_07525 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain M1F28_07525 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain M1F28_07525 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain M1F28_07540 PF02350 UDP-N-acetylglucosamine 2-epimerase M1F28_07575 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M1F28_07575 PF02894 Oxidoreductase family, C-terminal alpha/beta domain M1F28_07580 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family M1F28_07585 PF00132 Bacterial transferase hexapeptide (six repeats) M1F28_07600 PF16363 GDP-mannose 4,6 dehydratase M1F28_07610 PF00534 Glycosyl transferases group 1 M1F28_07610 PF00535 Glycosyl transferase family 2 M1F28_07615 PF03816 Cell envelope-related transcriptional attenuator domain M1F28_07620 PF03816 Cell envelope-related transcriptional attenuator domain M1F28_07630 PF00672 HAMP domain M1F28_07630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1F28_07630 PF00512 His Kinase A (phospho-acceptor) domain M1F28_07635 PF00072 Response regulator receiver domain M1F28_07635 PF00486 Transcriptional regulatory protein, C terminal M1F28_07640 PF16701 Adenylate cyclase regulatory domain M1F28_07640 PF00211 Adenylate and Guanylate cyclase catalytic domain M1F28_07650 PF02545 Maf-like protein M1F28_07660 PF00285 Citrate synthase, C-terminal domain M1F28_07665 PF00155 Aminotransferase class I and II M1F28_07670 PF00037 4Fe-4S binding domain M1F28_07685 PF03144 Elongation factor Tu domain 2 M1F28_07685 PF00679 Elongation factor G C-terminus M1F28_07685 PF00009 Elongation factor Tu GTP binding domain M1F28_07685 PF14492 Elongation Factor G, domain II M1F28_07695 PF00005 ABC transporter M1F28_07695 PF00664 ABC transporter transmembrane region M1F28_07700 PF00664 ABC transporter transmembrane region M1F28_07700 PF00005 ABC transporter M1F28_07705 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M1F28_07710 PF00005 ABC transporter M1F28_07710 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M1F28_07715 PF12911 N-terminal TM domain of oligopeptide transport permease C M1F28_07715 PF00528 Binding-protein-dependent transport system inner membrane component M1F28_07720 PF00528 Binding-protein-dependent transport system inner membrane component M1F28_07725 PF03099 Biotin/lipoate A/B protein ligase family M1F28_07730 PF04055 Radical SAM superfamily M1F28_07735 PF13193 AMP-binding enzyme C-terminal domain M1F28_07735 PF00501 AMP-binding enzyme M1F28_07740 PF02127 Aminopeptidase I zinc metalloprotease (M18) M1F28_07755 PF03971 Monomeric isocitrate dehydrogenase M1F28_07760 PF04143 Sulphur transport M1F28_07765 PF01206 Sulfurtransferase TusA M1F28_07770 PF00128 Alpha amylase, catalytic domain M1F28_07775 PF01055 Glycosyl hydrolases family 31 M1F28_07775 PF13802 Galactose mutarotase-like M1F28_07785 PF00528 Binding-protein-dependent transport system inner membrane component M1F28_07790 PF00528 Binding-protein-dependent transport system inner membrane component M1F28_07795 PF00480 ROK family M1F28_07820 PF00005 ABC transporter M1F28_07820 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M1F28_07825 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M1F28_07825 PF00005 ABC transporter M1F28_07830 PF12911 N-terminal TM domain of oligopeptide transport permease C M1F28_07830 PF00528 Binding-protein-dependent transport system inner membrane component M1F28_07835 PF00528 Binding-protein-dependent transport system inner membrane component M1F28_07840 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M1F28_07845 PF01226 Formate/nitrite transporter M1F28_07855 PF01327 Polypeptide deformylase M1F28_07860 PF01741 Large-conductance mechanosensitive channel, MscL M1F28_07885 PF01047 MarR family M1F28_07885 PF00583 Acetyltransferase (GNAT) family M1F28_07890 PF07972 NrdI Flavodoxin like M1F28_07895 PF00268 Ribonucleotide reductase, small chain M1F28_07900 PF03358 NADPH-dependent FMN reductase M1F28_07905 PF00440 Bacterial regulatory proteins, tetR family M1F28_07910 PF00083 Sugar (and other) transporter M1F28_07910 PF08946 Osmosensory transporter coiled coil M1F28_07925 PF00696 Amino acid kinase family M1F28_07930 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain M1F28_07930 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain M1F28_07940 PF00356 Bacterial regulatory proteins, lacI family M1F28_07945 PF00128 Alpha amylase, catalytic domain M1F28_07945 PF02903 Alpha amylase, N-terminal ig-like domain M1F28_07945 PF16657 Maltogenic Amylase, C-terminal domain M1F28_07950 PF00528 Binding-protein-dependent transport system inner membrane component M1F28_07955 PF00528 Binding-protein-dependent transport system inner membrane component M1F28_07960 PF13416 Bacterial extracellular solute-binding protein M1F28_07965 PF00128 Alpha amylase, catalytic domain M1F28_07970 PF07690 Major Facilitator Superfamily M1F28_07975 PF07687 Peptidase dimerisation domain M1F28_07975 PF01546 Peptidase family M20/M25/M40 M1F28_07980 PF07690 Major Facilitator Superfamily M1F28_07980 PF00083 Sugar (and other) transporter M1F28_08010 PF01926 50S ribosome-binding GTPase M1F28_08010 PF06071 Protein of unknown function (DUF933) M1F28_08015 PF02646 RmuC family M1F28_08020 PF03193 RsgA GTPase M1F28_08035 PF00005 ABC transporter M1F28_08055 PF02401 LytB protein M1F28_08060 PF13742 OB-fold nucleic acid binding domain M1F28_08060 PF02601 Exonuclease VII, large subunit M1F28_08065 PF02609 Exonuclease VII small subunit M1F28_08070 PF00294 pfkB family carbohydrate kinase M1F28_08075 PF01255 Putative undecaprenyl diphosphate synthase M1F28_08080 PF03006 Haemolysin-III related M1F28_08085 PF02585 GlcNAc-PI de-N-acetylase M1F28_08090 PF03449 Transcription elongation factor, N-terminal M1F28_08090 PF01272 Transcription elongation factor, GreA/GreB, C-term M1F28_08095 PF01625 Peptide methionine sulfoxide reductase M1F28_08110 PF00474 Sodium:solute symporter family M1F28_08115 PF00171 Aldehyde dehydrogenase family M1F28_08130 PF00005 ABC transporter M1F28_08135 PF00392 Bacterial regulatory proteins, gntR family M1F28_08145 PF00005 ABC transporter M1F28_08160 PF06965 Na+/H+ antiporter 1 M1F28_08165 PF02541 Ppx/GppA phosphatase family M1F28_08180 PF03952 Enolase, N-terminal domain M1F28_08180 PF00113 Enolase, C-terminal TIM barrel domain M1F28_08185 PF01156 Inosine-uridine preferring nucleoside hydrolase M1F28_08190 PF02559 CarD-like/TRCF domain M1F28_08190 PF00270 DEAD/DEAH box helicase M1F28_08190 PF00271 Helicase conserved C-terminal domain M1F28_08190 PF03461 TRCF domain M1F28_08190 PF17757 UvrB interaction domain M1F28_08195 PF01195 Peptidyl-tRNA hydrolase M1F28_08200 PF01386 Ribosomal L25p family M1F28_08200 PF14693 Ribosomal protein TL5, C-terminal domain M1F28_08205 PF14572 Phosphoribosyl synthetase-associated domain M1F28_08205 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase M1F28_08210 PF00132 Bacterial transferase hexapeptide (six repeats) M1F28_08210 PF12804 MobA-like NTP transferase domain M1F28_08220 PF00440 Bacterial regulatory proteins, tetR family M1F28_08235 PF00005 ABC transporter M1F28_08235 PF13732 Domain of unknown function (DUF4162) M1F28_08250 PF00005 ABC transporter M1F28_08250 PF16326 ABC transporter C-terminal domain M1F28_08250 PF12848 ABC transporter M1F28_08255 PF08544 GHMP kinases C terminal M1F28_08255 PF00288 GHMP kinases N terminal domain M1F28_08260 PF00398 Ribosomal RNA adenine dimethylase M1F28_08270 PF01026 TatD related DNase M1F28_08275 PF09334 tRNA synthetases class I (M) M1F28_08280 PF00857 Isochorismatase family M1F28_08285 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases M1F28_08295 PF16192 C-terminal four TMM region of protein-O-mannosyltransferase M1F28_08295 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase M1F28_08300 PF01053 Cys/Met metabolism PLP-dependent enzyme M1F28_08320 PF13732 Domain of unknown function (DUF4162) M1F28_08320 PF00005 ABC transporter M1F28_08335 PF05175 Methyltransferase small domain M1F28_08345 PF01594 AI-2E family transporter M1F28_08360 PF01336 OB-fold nucleic acid binding domain M1F28_08360 PF09924 Uncharacterised conserved protein (DUF2156) M1F28_08360 PF00152 tRNA synthetases class II (D, K and N) M1F28_08360 PF16995 Transmembrane region of lysyl-tRNA synthetase M1F28_08365 PF02652 L-lactate permease M1F28_08370 PF02754 Cysteine-rich domain M1F28_08375 PF11870 Domain of unknown function (DUF3390) M1F28_08375 PF13183 4Fe-4S dicluster domain M1F28_08375 PF02589 LUD domain M1F28_08380 PF02589 LUD domain M1F28_08400 PF00381 PTS HPr component phosphorylation site M1F28_08405 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 M1F28_08410 PF00367 phosphotransferase system, EIIB M1F28_08410 PF02378 Phosphotransferase system, EIIC M1F28_08430 PF00293 NUDIX domain M1F28_08440 PF05524 PEP-utilising enzyme, N-terminal M1F28_08440 PF00391 PEP-utilising enzyme, mobile domain M1F28_08440 PF02896 PEP-utilising enzyme, TIM barrel domain M1F28_08450 PF03123 CAT RNA binding domain M1F28_08450 PF00874 PRD domain M1F28_08455 PF02378 Phosphotransferase system, EIIC M1F28_08455 PF00367 phosphotransferase system, EIIB M1F28_08455 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 M1F28_08470 PF00005 ABC transporter M1F28_08470 PF00027 Cyclic nucleotide-binding domain M1F28_08475 PF05167 Uncharacterised ACR (DUF711) M1F28_08485 PF07690 Major Facilitator Superfamily M1F28_08495 PF00444 Ribosomal protein L36 M1F28_08500 PF01197 Ribosomal protein L31 M1F28_08505 PF00253 Ribosomal protein S14p/S29e M1F28_08510 PF00471 Ribosomal protein L33 M1F28_08515 PF00830 Ribosomal L28 family M1F28_08530 PF00083 Sugar (and other) transporter M1F28_08535 PF07859 alpha/beta hydrolase fold M1F28_08540 PF00392 Bacterial regulatory proteins, gntR family M1F28_08540 PF07702 UTRA domain M1F28_08545 PF00005 ABC transporter M1F28_08550 PF01032 FecCD transport family M1F28_08555 PF01032 FecCD transport family M1F28_08560 PF01497 Periplasmic binding protein M1F28_08575 PF12697 Alpha/beta hydrolase family M1F28_08590 PF05973 Phage derived protein Gp49-like (DUF891) M1F28_08595 PF01381 Helix-turn-helix M1F28_08620 PF00994 Probable molybdopterin binding domain M1F28_08620 PF03453 MoeA N-terminal region (domain I and II) M1F28_08620 PF03454 MoeA C-terminal region (domain IV) M1F28_08655 PF00582 Universal stress protein family M1F28_08660 PF01476 LysM domain M1F28_08660 PF00877 NlpC/P60 family M1F28_08665 PF18357 Diphteria toxin repressor SH3 domain M1F28_08665 PF02742 Iron dependent repressor, metal binding and dimerisation domain M1F28_08665 PF01325 Iron dependent repressor, N-terminal DNA binding domain M1F28_08670 PF00266 Aminotransferase class-V M1F28_08675 PF00860 Permease family M1F28_08680 PF01238 Phosphomannose isomerase type I M1F28_08685 PF11228 Protein of unknown function (DUF3027) M1F28_08690 PF00313 'Cold-shock' DNA-binding domain M1F28_08700 PF04012 PspA/IM30 family M1F28_08710 PF00072 Response regulator receiver domain M1F28_08710 PF00486 Transcriptional regulatory protein, C terminal M1F28_08715 PF00512 His Kinase A (phospho-acceptor) domain M1F28_08715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1F28_08715 PF00672 HAMP domain M1F28_08720 PF01553 Acyltransferase M1F28_08720 PF00501 AMP-binding enzyme M1F28_08725 PF00106 short chain dehydrogenase M1F28_08740 PF00118 TCP-1/cpn60 chaperonin family M1F28_08755 PF03167 Uracil DNA glycosylase superfamily M1F28_08785 PF00069 Protein kinase domain M1F28_08785 PF00400 WD domain, G-beta repeat M1F28_08790 PF00005 ABC transporter M1F28_08790 PF17912 MalK OB fold domain M1F28_08800 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M1F28_08800 PF02894 Oxidoreductase family, C-terminal alpha/beta domain M1F28_08810 PF01547 Bacterial extracellular solute-binding protein M1F28_08815 PF00528 Binding-protein-dependent transport system inner membrane component M1F28_08820 PF00528 Binding-protein-dependent transport system inner membrane component M1F28_08835 PF01118 Semialdehyde dehydrogenase, NAD binding domain M1F28_08835 PF02774 Semialdehyde dehydrogenase, dimerisation domain M1F28_08840 PF13840 ACT domain M1F28_08840 PF00696 Amino acid kinase family M1F28_08840 PF01842 ACT domain M1F28_08845 PF02132 RecR protein M1F28_08845 PF13662 Toprim domain M1F28_08850 PF12169 DNA polymerase III subunits gamma and tau domain III M1F28_08860 PF02554 Carbon starvation protein CstA M1F28_08860 PF13722 5TM C-terminal transporter carbon starvation CstA M1F28_08885 PF00860 Permease family M1F28_08900 PF00588 SpoU rRNA Methylase family M1F28_08900 PF08032 RNA 2'-O ribose methyltransferase substrate binding M1F28_08905 PF09190 DALR domain M1F28_08905 PF01406 tRNA synthetases class I (C) catalytic domain M1F28_08915 PF00005 ABC transporter M1F28_08920 PF04198 Putative sugar-binding domain M1F28_08930 PF02733 Dak1 domain M1F28_08940 PF00596 Class II Aldolase and Adducin N-terminal domain M1F28_08945 PF03611 PTS system sugar-specific permease component M1F28_08975 PF02542 YgbB family M1F28_08980 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase M1F28_08985 PF02559 CarD-like/TRCF domain M1F28_08990 PF00072 Response regulator receiver domain M1F28_08990 PF00486 Transcriptional regulatory protein, C terminal M1F28_08995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1F28_08995 PF00512 His Kinase A (phospho-acceptor) domain M1F28_09000 PF01895 PhoU domain M1F28_09005 PF00300 Histidine phosphatase superfamily (branch 1) M1F28_09020 PF16555 Gram-positive pilin subunit D1, N-terminal domain M1F28_09020 PF00746 LPXTG cell wall anchor motif M1F28_09050 PF00005 ABC transporter M1F28_09055 PF01032 FecCD transport family M1F28_09065 PF00884 Sulfatase M1F28_09070 PF00884 Sulfatase M1F28_09080 PF01066 CDP-alcohol phosphatidyltransferase M1F28_09085 PF00762 Ferrochelatase M1F28_09090 PF00248 Aldo/keto reductase family M1F28_09100 PF01487 Type I 3-dehydroquinase M1F28_09130 PF17863 AAA lid domain M1F28_09130 PF07726 ATPase family associated with various cellular activities (AAA) M1F28_09140 PF14256 YwiC-like protein M1F28_09145 PF00155 Aminotransferase class I and II M1F28_09150 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV M1F28_09155 PF08328 Adenylosuccinate lyase C-terminal M1F28_09155 PF00206 Lyase M1F28_09160 PF09335 SNARE associated Golgi protein M1F28_09170 PF00403 Heavy-metal-associated domain M1F28_09170 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1F28_09170 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M1F28_09175 PF00403 Heavy-metal-associated domain M1F28_09185 PF00754 F5/8 type C domain M1F28_09185 PF13088 BNR repeat-like domain M1F28_09185 PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase M1F28_09190 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M1F28_09190 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M1F28_09190 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M1F28_09190 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M1F28_09195 PF01497 Periplasmic binding protein M1F28_09200 PF01032 FecCD transport family M1F28_09205 PF01032 FecCD transport family M1F28_09210 PF00005 ABC transporter M1F28_09225 PF00107 Zinc-binding dehydrogenase M1F28_09225 PF08240 Alcohol dehydrogenase GroES-like domain M1F28_09230 PF00356 Bacterial regulatory proteins, lacI family M1F28_09235 PF07690 Major Facilitator Superfamily M1F28_09240 PF00459 Inositol monophosphatase family M1F28_09245 PF13407 Periplasmic binding protein domain M1F28_09250 PF02653 Branched-chain amino acid transport system / permease component M1F28_09255 PF00005 ABC transporter M1F28_09260 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M1F28_09260 PF02894 Oxidoreductase family, C-terminal alpha/beta domain M1F28_09265 PF01261 Xylose isomerase-like TIM barrel M1F28_09270 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M1F28_09270 PF02894 Oxidoreductase family, C-terminal alpha/beta domain M1F28_09275 PF00923 Transaldolase/Fructose-6-phosphate aldolase M1F28_09285 PF00294 pfkB family carbohydrate kinase M1F28_09295 PF04962 KduI/IolB family M1F28_09300 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M1F28_09300 PF00205 Thiamine pyrophosphate enzyme, central domain M1F28_09300 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M1F28_09305 PF00171 Aldehyde dehydrogenase family M1F28_09310 PF00005 ABC transporter M1F28_09315 PF01032 FecCD transport family M1F28_09320 PF01032 FecCD transport family M1F28_09325 PF01497 Periplasmic binding protein M1F28_09330 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M1F28_09330 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain M1F28_09335 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component M1F28_09340 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component M1F28_09340 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component M1F28_09345 PF03480 Bacterial extracellular solute-binding protein, family 7 M1F28_09350 PF02614 Glucuronate isomerase M1F28_09365 PF03932 CutC family M1F28_09380 PF00480 ROK family M1F28_09390 PF00528 Binding-protein-dependent transport system inner membrane component M1F28_09395 PF12911 N-terminal TM domain of oligopeptide transport permease C M1F28_09395 PF00528 Binding-protein-dependent transport system inner membrane component M1F28_09400 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M1F28_09400 PF00005 ABC transporter M1F28_09405 PF00480 ROK family M1F28_09410 PF00480 ROK family M1F28_09420 PF00528 Binding-protein-dependent transport system inner membrane component M1F28_09425 PF00528 Binding-protein-dependent transport system inner membrane component M1F28_09430 PF09508 Lacto-N-biose phosphorylase N-terminal TIM barrel domain M1F28_09430 PF17386 Lacto-N-biose phosphorylase C-terminal domain M1F28_09430 PF17385 Lacto-N-biose phosphorylase central domain M1F28_09435 PF01636 Phosphotransferase enzyme family M1F28_09440 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain M1F28_09440 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain M1F28_09450 PF00005 ABC transporter M1F28_09455 PF00664 ABC transporter transmembrane region M1F28_09455 PF00005 ABC transporter M1F28_09455 PF08021 Siderophore-interacting FAD-binding domain M1F28_09455 PF04954 Siderophore-interacting protein M1F28_09460 PF00005 ABC transporter M1F28_09465 PF02361 Cobalt transport protein M1F28_09480 PF00939 Sodium:sulfate symporter transmembrane region M1F28_09490 PF13610 DDE domain M1F28_09495 PF00239 Resolvase, N terminal domain M1F28_09495 PF02796 Helix-turn-helix domain of resolvase M1F28_09500 PF00398 Ribosomal RNA adenine dimethylase M1F28_09505 PF13610 DDE domain M1F28_09515 PF01909 Nucleotidyltransferase domain M1F28_09515 PF13427 Domain of unknown function (DUF4111) M1F28_09520 PF00893 Small Multidrug Resistance protein M1F28_09525 PF00809 Pterin binding enzyme M1F28_09535 PF07690 Major Facilitator Superfamily M1F28_09540 PF00665 Integrase core domain M1F28_09545 PF13610 DDE domain M1F28_09565 PF01113 Dihydrodipicolinate reductase, N-terminus M1F28_09565 PF16654 Diaminopimelic acid dehydrogenase C-terminal domain M1F28_09570 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M1F28_09570 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M1F28_09575 PF00005 ABC transporter M1F28_09580 PF02653 Branched-chain amino acid transport system / permease component M1F28_09585 PF02653 Branched-chain amino acid transport system / permease component M1F28_09590 PF13407 Periplasmic binding protein domain M1F28_09595 PF04198 Putative sugar-binding domain M1F28_09600 PF00370 FGGY family of carbohydrate kinases, N-terminal domain M1F28_09600 PF02782 FGGY family of carbohydrate kinases, C-terminal domain M1F28_09610 PF01791 DeoC/LacD family aldolase M1F28_09615 PF01695 IstB-like ATP binding protein M1F28_09625 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1F28_09630 PF01661 Macro domain M1F28_09645 PF01867 CRISPR associated protein Cas1 M1F28_09650 PF18019 HD domain M1F28_09650 PF18395 Cas3 C-terminal domain M1F28_09685 PF13635 Domain of unknown function (DUF4143) M1F28_09685 PF13173 AAA domain M1F28_09690 PF05958 tRNA (Uracil-5-)-methyltransferase M1F28_09705 PF00270 DEAD/DEAH box helicase M1F28_09705 PF04408 Helicase associated domain (HA2) M1F28_09705 PF08482 ATP-dependent helicase C-terminal M1F28_09705 PF00271 Helicase conserved C-terminal domain M1F28_09720 PF02386 Cation transport protein M1F28_09750 PF12704 MacB-like periplasmic core domain M1F28_09750 PF00005 ABC transporter M1F28_09750 PF02687 FtsX-like permease family M1F28_09755 PF00005 ABC transporter M1F28_09770 PF00072 Response regulator receiver domain M1F28_09770 PF00486 Transcriptional regulatory protein, C terminal M1F28_09775 PF00512 His Kinase A (phospho-acceptor) domain M1F28_09775 PF00672 HAMP domain M1F28_09775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1F28_09780 PF01702 Queuine tRNA-ribosyltransferase M1F28_09790 PF01712 Deoxynucleoside kinase M1F28_09810 PF00291 Pyridoxal-phosphate dependent enzyme M1F28_09810 PF00585 C-terminal regulatory domain of Threonine dehydratase M1F28_09825 PF00561 alpha/beta hydrolase fold M1F28_09830 PF00248 Aldo/keto reductase family M1F28_09835 PF08543 Phosphomethylpyrimidine kinase M1F28_09845 PF00899 ThiF family M1F28_09855 PF07690 Major Facilitator Superfamily M1F28_09860 PF03796 DnaB-like helicase C terminal domain M1F28_09860 PF00772 DnaB-like helicase N terminal domain M1F28_09885 PF03948 Ribosomal protein L9, C-terminal domain M1F28_09885 PF01281 Ribosomal protein L9, N-terminal domain M1F28_09890 PF01084 Ribosomal protein S18 M1F28_09895 PF00436 Single-strand binding protein family M1F28_09900 PF01250 Ribosomal protein S6 M1F28_09905 PF00912 Transglycosylase M1F28_09905 PF00905 Penicillin binding protein transpeptidase domain M1F28_09910 PF01594 AI-2E family transporter M1F28_09915 PF07690 Major Facilitator Superfamily M1F28_09920 PF01743 Poly A polymerase head domain M1F28_09920 PF12627 Probable RNA and SrmB- binding site of polymerase A M1F28_09920 PF13735 tRNA nucleotidyltransferase domain 2 putative M1F28_09925 PF00293 NUDIX domain M1F28_09940 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1F28_09945 PF00155 Aminotransferase class I and II M1F28_09950 PF01820 D-ala D-ala ligase N-terminus M1F28_09950 PF07478 D-ala D-ala ligase C-terminus M1F28_09955 PF17762 HTH domain found in ParB protein M1F28_09955 PF02195 ParB-like nuclease domain M1F28_09960 PF13614 AAA domain M1F28_09965 PF02527 rRNA small subunit methyltransferase G M1F28_09975 PF02096 60Kd inner membrane protein M1F28_09980 PF01809 Putative membrane protein insertion efficiency factor M1F28_09985 PF00825 Ribonuclease P M1F28_09990 PF00468 Ribosomal protein L34