DDE06_00015 SM00116 Domain in cystathionine beta-synthase and other proteins. DDE06_00015 SM01091 Transporter associated domain DDE06_00030 SM00331 Sigma factor PP2C-like phosphatases DDE06_00030 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain DDE06_00040 SM00220 Serine/Threonine protein kinases, catalytic domain DDE06_00045 SM00917 LeuA allosteric (dimerisation) domain DDE06_00115 SM00967 RNA 2'-O ribose methyltransferase substrate binding DDE06_00130 SM00873 B3/4 domain DDE06_00130 SM00874 tRNA synthetase B5 domain DDE06_00130 SM00896 Ferredoxin-fold anticodon binding domain DDE06_00170 SM00530 Helix-turn-helix XRE-family like proteins DDE06_00180 SM00382 ATPases associated with a variety of cellular activities DDE06_00195 SM00382 ATPases associated with a variety of cellular activities DDE06_00240 SM00363 S4 RNA-binding domain DDE06_00300 SM00382 ATPases associated with a variety of cellular activities DDE06_00320 SM00450 Rhodanese Homology Domain DDE06_00325 SM00382 ATPases associated with a variety of cellular activities DDE06_00330 SM00855 Phosphoglycerate mutase family DDE06_00345 SM00382 ATPases associated with a variety of cellular activities DDE06_00360 SM00382 ATPases associated with a variety of cellular activities DDE06_00370 SM00244 prohibitin homologues DDE06_00380 SM00530 Helix-turn-helix XRE-family like proteins DDE06_00410 SM00481 DNA polymerase alpha chain like domain DDE06_00480 SM00382 ATPases associated with a variety of cellular activities DDE06_00540 SM00448 cheY-homologous receiver domain DDE06_00540 SM01012 DDE06_00540 DDE06_00550 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs DDE06_00550 SM00474 3'-5' exonuclease DDE06_00550 SM00475 5'-3' exonuclease DDE06_00550 SM00482 DNA polymerase A domain DDE06_00555 SM00316 Ribosomal protein S1-like RNA-binding domain DDE06_00565 SM00382 ATPases associated with a variety of cellular activities DDE06_00580 SM00487 DEAD-like helicases superfamily DDE06_00580 SM00490 helicase superfamily c-terminal domain DDE06_00605 SM00465 GIY-YIG type nucleases (URI domain) DDE06_00625 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DDE06_00660 SM00861 Transketolase, pyrimidine binding domain DDE06_00685 SM00363 S4 RNA-binding domain DDE06_00695 SM00382 ATPases associated with a variety of cellular activities DDE06_00720 SM00240 Forkhead associated domain DDE06_00725 SM00422 helix_turn_helix, mercury resistance DDE06_00730 SM00422 helix_turn_helix, mercury resistance DDE06_00755 SM00487 DEAD-like helicases superfamily DDE06_00755 SM00490 helicase superfamily c-terminal domain DDE06_00755 SM01142 DDE06_00755 DDE06_00760 SM00046 Diacylglycerol kinase catalytic domain (presumed) DDE06_00795 SM00062 Bacterial periplasmic substrate-binding proteins DDE06_00835 SM01409 DDE06_00835 DDE06_00840 SM00072 Guanylate kinase homologues. DDE06_00850 SM00851 MGS-like domain DDE06_00855 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain DDE06_00865 SM00841 Elongation factor P, C-terminal DDE06_00865 SM01185 DDE06_00865 DDE06_00905 SM00732 Likely ribonuclease with RNase H fold. DDE06_00910 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain DDE06_00920 SM00363 S4 RNA-binding domain DDE06_00920 SM01390 DDE06_00920 DDE06_00925 SM00382 ATPases associated with a variety of cellular activities DDE06_00955 SM00487 DEAD-like helicases superfamily DDE06_00955 SM00490 helicase superfamily c-terminal domain DDE06_00980 SM00849 Metallo-beta-lactamase superfamily DDE06_00995 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DDE06_00995 SM00954 Region found in RelA / SpoT proteins DDE06_01015 SM01323 DDE06_01015 DDE06_01020 SM00382 ATPases associated with a variety of cellular activities DDE06_01025 SM00278 Helix-hairpin-helix DNA-binding motif class 1 DDE06_01065 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain DDE06_01075 SM00421 helix_turn_helix, Lux Regulon DDE06_01075 SM00448 cheY-homologous receiver domain DDE06_01120 SM00642 Alpha-amylase domain DDE06_01125 SM00642 Alpha-amylase domain DDE06_01130 SM00642 Alpha-amylase domain DDE06_01140 SM00341 Helicase and RNase D C-terminal DDE06_01140 SM00474 3'-5' exonuclease DDE06_01145 SM00861 Transketolase, pyrimidine binding domain DDE06_01150 SM00191 Integrin alpha (beta-propellor repeats). DDE06_01215 SM00434 DNA Topoisomerase IV DDE06_01230 SM00387 Histidine kinase-like ATPases DDE06_01230 SM00433 TopoisomeraseII DDE06_01240 SM00479 DDE06_01240 DDE06_01270 SM00257 Lysin motif DDE06_01275 SM00220 Serine/Threonine protein kinases, catalytic domain DDE06_01275 SM00740 DDE06_01275 DDE06_01295 SM00465 GIY-YIG type nucleases (URI domain) DDE06_01295 SM00479 DDE06_01295 DDE06_01375 SM01230 DDE06_01375 DDE06_01380 SM00855 Phosphoglycerate mutase family DDE06_01390 SM01230 DDE06_01390 DDE06_01445 SM00642 Alpha-amylase domain DDE06_01465 SM00382 ATPases associated with a variety of cellular activities DDE06_01470 SM00382 ATPases associated with a variety of cellular activities DDE06_01535 SM00382 ATPases associated with a variety of cellular activities DDE06_01590 SM00400 zinc finger DDE06_01590 SM00493 DDE06_01590 DDE06_01595 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DDE06_01625 SM00382 ATPases associated with a variety of cellular activities DDE06_01650 SM00481 DNA polymerase alpha chain like domain DDE06_01660 SM00363 S4 RNA-binding domain DDE06_01690 SM00864 Tubulin/FtsZ family, GTPase domain DDE06_01690 SM00865 Tubulin/FtsZ family, C-terminal domain DDE06_01795 SM00257 Lysin motif DDE06_01805 SM00491 DDE06_01805 DDE06_01825 SM00729 Elongator protein 3, MiaB family, Radical SAM DDE06_01835 SM00382 ATPases associated with a variety of cellular activities DDE06_01845 SM00530 Helix-turn-helix XRE-family like proteins DDE06_01860 SM00854 Bacterial capsule synthesis protein PGA_cap DDE06_01865 SM00843 DDE06_01865 DDE06_01870 SM00849 Metallo-beta-lactamase superfamily DDE06_01875 SM01130 DDE06_01875 DDE06_01885 SM00487 DEAD-like helicases superfamily DDE06_01885 SM00490 helicase superfamily c-terminal domain DDE06_01905 SM00316 Ribosomal protein S1-like RNA-binding domain DDE06_01905 SM00322 K homology RNA-binding domain DDE06_01910 SM01387 DDE06_01910 DDE06_01920 SM00382 ATPases associated with a variety of cellular activities DDE06_01930 SM00904 Riboflavin kinase DDE06_01950 SM00382 ATPases associated with a variety of cellular activities DDE06_01965 SM00448 cheY-homologous receiver domain DDE06_01965 SM00862 Transcriptional regulatory protein, C terminal DDE06_01970 SM00387 Histidine kinase-like ATPases DDE06_01970 SM00388 His Kinase A (phosphoacceptor) domain DDE06_01985 SM00173 Ras subfamily of RAS small GTPases DDE06_01995 SM00316 Ribosomal protein S1-like RNA-binding domain DDE06_02060 SM00363 S4 RNA-binding domain DDE06_02085 SM00893 Electron transfer flavoprotein domain DDE06_02120 SM00382 ATPases associated with a variety of cellular activities DDE06_02185 SM00382 ATPases associated with a variety of cellular activities DDE06_02185 SM00962 SRP54-type protein, GTPase domain DDE06_02185 SM00963 SRP54-type protein, helical bundle domain DDE06_02190 SM00382 ATPases associated with a variety of cellular activities DDE06_02190 SM00962 SRP54-type protein, GTPase domain DDE06_02190 SM00963 SRP54-type protein, helical bundle domain DDE06_02205 SM00968 SMC proteins Flexible Hinge Domain DDE06_02210 SM00562 DDE06_02210 DDE06_02255 SM00830 Chorismate mutase type II DDE06_02260 SM00382 ATPases associated with a variety of cellular activities DDE06_02260 SM00994 ClpX C4-type zinc finger DDE06_02260 SM01086 C-terminal, D2-small domain, of ClpB protein DDE06_02305 SM00354 helix_turn _helix lactose operon repressor DDE06_02320 SM00382 ATPases associated with a variety of cellular activities DDE06_02410 SM00382 ATPases associated with a variety of cellular activities DDE06_02435 SM00479 DDE06_02435 DDE06_02520 SM00487 DEAD-like helicases superfamily DDE06_02520 SM00490 helicase superfamily c-terminal domain DDE06_02555 SM01329 DDE06_02555 DDE06_02645 SM00919 Malic enzyme, NAD binding domain DDE06_02645 SM01274 DDE06_02645 DDE06_02650 SM00845 GatB domain DDE06_02665 SM00155 Phospholipase D. Active site motifs. DDE06_02695 SM00345 helix_turn_helix gluconate operon transcriptional repressor DDE06_02695 SM00866 DDE06_02695 DDE06_02700 SM00292 breast cancer carboxy-terminal domain DDE06_02700 SM00532 Ligase N family DDE06_02710 SM00387 Histidine kinase-like ATPases DDE06_02715 SM00421 helix_turn_helix, Lux Regulon DDE06_02715 SM00448 cheY-homologous receiver domain DDE06_02735 SM00387 Histidine kinase-like ATPases DDE06_02790 SM00382 ATPases associated with a variety of cellular activities DDE06_02795 SM00345 helix_turn_helix gluconate operon transcriptional repressor DDE06_02845 SM00341 Helicase and RNase D C-terminal DDE06_02855 SM00642 Alpha-amylase domain DDE06_02885 SM00382 ATPases associated with a variety of cellular activities DDE06_02895 SM00642 Alpha-amylase domain DDE06_02900 SM00642 Alpha-amylase domain DDE06_02910 SM00642 Alpha-amylase domain DDE06_02940 SM00354 helix_turn _helix lactose operon repressor DDE06_02945 SM00642 Alpha-amylase domain DDE06_03000 SM00382 ATPases associated with a variety of cellular activities DDE06_03055 SM00937 DDE06_03055 DDE06_03065 SM00382 ATPases associated with a variety of cellular activities DDE06_03090 SM00836 DALR anticodon binding domain DDE06_03090 SM01016 Arginyl tRNA synthetase N terminal dom DDE06_03100 SM00894 Excalibur calcium-binding domain DDE06_03115 SM00382 ATPases associated with a variety of cellular activities DDE06_03140 SM00116 Domain in cystathionine beta-synthase and other proteins. DDE06_03145 SM00116 Domain in cystathionine beta-synthase and other proteins. DDE06_03145 SM01091 Transporter associated domain DDE06_03150 SM00861 Transketolase, pyrimidine binding domain DDE06_03200 SM01130 DDE06_03200 DDE06_03205 SM00382 ATPases associated with a variety of cellular activities DDE06_03210 SM00382 ATPases associated with a variety of cellular activities DDE06_03225 SM00345 helix_turn_helix gluconate operon transcriptional repressor DDE06_03225 SM00895 DDE06_03225 DDE06_03290 SM00858 DDE06_03290 DDE06_03315 SM00957 SecA DEAD-like domain DDE06_03315 SM00958 SecA preprotein cross-linking domain DDE06_03360 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DDE06_03365 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region DDE06_03410 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. DDE06_03420 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain DDE06_03465 SM00855 Phosphoglycerate mutase family DDE06_03470 SM00347 helix_turn_helix multiple antibiotic resistance protein DDE06_03475 SM01155 DDE06_03475 DDE06_03495 SM00382 ATPases associated with a variety of cellular activities DDE06_03505 SM00478 endonuclease III DDE06_03505 SM00525 DDE06_03505 DDE06_03590 SM01120 DDE06_03590 DDE06_03605 SM01038 Beta galactosidase small chain DDE06_03625 SM00354 helix_turn _helix lactose operon repressor DDE06_03645 SM00905 Dihydroneopterin aldolase DDE06_03660 SM00382 ATPases associated with a variety of cellular activities DDE06_03740 SM00642 Alpha-amylase domain DDE06_03745 SM00530 Helix-turn-helix XRE-family like proteins DDE06_03775 SM01101 DDE06_03775 DDE06_03800 SM00487 DEAD-like helicases superfamily DDE06_03800 SM00490 helicase superfamily c-terminal domain DDE06_03835 SM00345 helix_turn_helix gluconate operon transcriptional repressor DDE06_03835 SM00866 DDE06_03835 DDE06_03850 SM00382 ATPases associated with a variety of cellular activities DDE06_03880 SM00345 helix_turn_helix gluconate operon transcriptional repressor DDE06_03905 SM00354 helix_turn _helix lactose operon repressor DDE06_03940 SM00382 ATPases associated with a variety of cellular activities DDE06_03950 SM00354 helix_turn _helix lactose operon repressor DDE06_03955 SM00382 ATPases associated with a variety of cellular activities DDE06_03980 SM00382 ATPases associated with a variety of cellular activities DDE06_04010 SM01350 DDE06_04010 DDE06_04015 SM00345 helix_turn_helix gluconate operon transcriptional repressor DDE06_04015 SM00895 DDE06_04015 DDE06_04025 SM00354 helix_turn _helix lactose operon repressor DDE06_04035 SM01038 Beta galactosidase small chain DDE06_04065 SM00354 helix_turn _helix lactose operon repressor DDE06_04110 SM00382 ATPases associated with a variety of cellular activities DDE06_04170 SM00420 helix_turn_helix, Deoxyribose operon repressor DDE06_04170 SM01134 DDE06_04170 DDE06_04210 SM00354 helix_turn _helix lactose operon repressor DDE06_04235 SM00829 Enoylreductase DDE06_04240 SM01120 DDE06_04240 DDE06_04250 SM01007 Class II Aldolase and Adducin N-terminal domain DDE06_04265 SM00420 helix_turn_helix, Deoxyribose operon repressor DDE06_04265 SM01134 DDE06_04265 DDE06_04305 SM00382 ATPases associated with a variety of cellular activities DDE06_04305 SM01086 C-terminal, D2-small domain, of ClpB protein DDE06_04360 SM00382 ATPases associated with a variety of cellular activities DDE06_04380 SM00855 Phosphoglycerate mutase family DDE06_04445 SM00482 DNA polymerase A domain DDE06_04455 SM00885 D5 N terminal like DDE06_04455 SM00942 Primase C terminal 1 (PriCT-1) DDE06_04460 SM00990 DDE06_04460 DDE06_04470 SM00487 DEAD-like helicases superfamily DDE06_04480 SM00507 HNH nucleases DDE06_04495 SM00470 ParB-like nuclease domain DDE06_04575 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor DDE06_04675 SM00644 DDE06_04675 DDE06_04675 SM01095 Cpl-7 lysozyme C-terminal domain DDE06_04685 SM00857 Resolvase, N terminal domain DDE06_04690 SM00857 Resolvase, N terminal domain DDE06_04710 SM00650 Ribosomal RNA adenine dimethylases DDE06_04775 SM00327 von Willebrand factor (vWF) type A domain DDE06_04785 SM00421 helix_turn_helix, Lux Regulon DDE06_04820 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DDE06_04835 SM00788 Adenylosuccinate synthetase DDE06_04895 SM00382 ATPases associated with a variety of cellular activities DDE06_04895 SM01086 C-terminal, D2-small domain, of ClpB protein DDE06_04935 SM00191 Integrin alpha (beta-propellor repeats). DDE06_04935 SM00364 Leucine-rich repeats, bacterial type DDE06_04935 SM00365 Leucine-rich repeat, SDS22-like subfamily DDE06_04950 SM00271 DnaJ molecular chaperone homology domain DDE06_04975 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family DDE06_04995 SM00926 Molybdopterin oxidoreductase Fe4S4 domain DDE06_05010 SM00450 Rhodanese Homology Domain DDE06_05020 SM00926 Molybdopterin oxidoreductase Fe4S4 domain DDE06_05060 SM00478 endonuclease III DDE06_05095 SM00382 ATPases associated with a variety of cellular activities DDE06_05230 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain DDE06_05230 SM00437 Bacterial DNA topoisomerase I DNA-binding domain DDE06_05230 SM00493 DDE06_05230 DDE06_05250 SM00487 DEAD-like helicases superfamily DDE06_05250 SM00490 helicase superfamily c-terminal domain DDE06_05300 SM00478 endonuclease III DDE06_05300 SM00525 DDE06_05300 DDE06_05305 SM00100 Cyclic nucleotide-monophosphate binding domain DDE06_05305 SM00419 helix_turn_helix, cAMP Regulatory protein DDE06_05325 SM00740 DDE06_05325 DDE06_05340 SM00642 Alpha-amylase domain DDE06_05350 SM00729 Elongator protein 3, MiaB family, Radical SAM DDE06_05365 SM00852 Probable molybdopterin binding domain DDE06_05370 SM00852 Probable molybdopterin binding domain DDE06_05380 SM00382 ATPases associated with a variety of cellular activities DDE06_05500 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor DDE06_05530 SM00382 ATPases associated with a variety of cellular activities DDE06_05535 SM00345 helix_turn_helix gluconate operon transcriptional repressor DDE06_05535 SM00866 DDE06_05535 DDE06_05580 SM00487 DEAD-like helicases superfamily DDE06_05585 SM00530 Helix-turn-helix XRE-family like proteins DDE06_05665 SM00487 DEAD-like helicases superfamily DDE06_05705 SM00354 helix_turn _helix lactose operon repressor DDE06_05710 SM00382 ATPases associated with a variety of cellular activities DDE06_05715 SM00382 ATPases associated with a variety of cellular activities DDE06_05740 SM00382 ATPases associated with a variety of cellular activities DDE06_05775 SM00346 helix_turn_helix isocitrate lyase regulation DDE06_05780 SM00382 ATPases associated with a variety of cellular activities DDE06_05810 SM00421 helix_turn_helix, Lux Regulon DDE06_05810 SM00448 cheY-homologous receiver domain DDE06_05820 SM00382 ATPases associated with a variety of cellular activities DDE06_05830 SM00382 ATPases associated with a variety of cellular activities DDE06_05845 SM00421 helix_turn_helix, Lux Regulon DDE06_05845 SM00448 cheY-homologous receiver domain DDE06_05850 SM00382 ATPases associated with a variety of cellular activities DDE06_05850 SM00487 DEAD-like helicases superfamily DDE06_05850 SM00490 helicase superfamily c-terminal domain DDE06_05850 SM00847 Helicase associated domain (HA2) Add an annotation DDE06_05865 SM00731 SprT homologues. DDE06_05900 SM00226 Low molecular weight phosphatase family DDE06_05950 SM00506 Appr-1"-p processing enzyme DDE06_05975 SM00240 Forkhead associated domain DDE06_05980 SM00240 Forkhead associated domain DDE06_05985 SM00331 Sigma factor PP2C-like phosphatases DDE06_05985 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain DDE06_06000 SM00220 Serine/Threonine protein kinases, catalytic domain DDE06_06000 SM00740 DDE06_06000 DDE06_06055 SM00434 DNA Topoisomerase IV DDE06_06060 SM00387 Histidine kinase-like ATPases DDE06_06060 SM00433 TopoisomeraseII DDE06_06075 SM00480 DNA polymerase III beta subunit DDE06_06080 SM00382 ATPases associated with a variety of cellular activities DDE06_06080 SM00760 Bacterial dnaA protein helix-turn-helix domain DDE06_06095 SM01234 DDE06_06095 DDE06_06105 SM00393 Putative single-stranded nucleic acids-binding domain DDE06_06120 SM00470 ParB-like nuclease domain DDE06_06155 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DDE06_06210 SM00382 ATPases associated with a variety of cellular activities DDE06_06235 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DDE06_06255 SM00563 Phosphate acyltransferases DDE06_06300 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DDE06_06300 SM00387 Histidine kinase-like ATPases DDE06_06300 SM00388 His Kinase A (phosphoacceptor) domain DDE06_06305 SM00448 cheY-homologous receiver domain DDE06_06305 SM00862 Transcriptional regulatory protein, C terminal DDE06_06320 SM00382 ATPases associated with a variety of cellular activities DDE06_06370 SM00487 DEAD-like helicases superfamily DDE06_06370 SM00490 helicase superfamily c-terminal domain DDE06_06370 SM00847 Helicase associated domain (HA2) Add an annotation DDE06_06415 SM00506 Appr-1"-p processing enzyme DDE06_06450 SM01133 DDE06_06450 DDE06_06485 SM00382 ATPases associated with a variety of cellular activities DDE06_06535 SM00382 ATPases associated with a variety of cellular activities DDE06_06540 SM00382 ATPases associated with a variety of cellular activities DDE06_06545 SM00382 ATPases associated with a variety of cellular activities DDE06_06605 SM00382 ATPases associated with a variety of cellular activities DDE06_06630 SM00812 Alpha-L-fucosidase DDE06_06675 SM01350 DDE06_06675 DDE06_06695 SM00382 ATPases associated with a variety of cellular activities DDE06_06725 SM00345 helix_turn_helix gluconate operon transcriptional repressor DDE06_06725 SM00866 DDE06_06725 DDE06_06750 SM00382 ATPases associated with a variety of cellular activities DDE06_06775 SM00354 helix_turn _helix lactose operon repressor DDE06_06780 SM00829 Enoylreductase DDE06_06785 SM00060 Fibronectin type 3 domain DDE06_06800 SM00382 ATPases associated with a variety of cellular activities DDE06_06805 SM00382 ATPases associated with a variety of cellular activities DDE06_06810 SM00382 ATPases associated with a variety of cellular activities DDE06_06965 SM00382 ATPases associated with a variety of cellular activities DDE06_07010 SM00855 Phosphoglycerate mutase family DDE06_07025 SM00387 Histidine kinase-like ATPases DDE06_07025 SM00388 His Kinase A (phosphoacceptor) domain DDE06_07030 SM00448 cheY-homologous receiver domain DDE06_07030 SM00862 Transcriptional regulatory protein, C terminal DDE06_07035 SM01058 CarD-like/TRCF domain DDE06_07070 SM01007 Class II Aldolase and Adducin N-terminal domain DDE06_07075 SM00855 Phosphoglycerate mutase family DDE06_07085 SM01120 DDE06_07085 DDE06_07105 SM00382 ATPases associated with a variety of cellular activities DDE06_07115 SM00840 DDE06_07115 DDE06_07120 SM00967 RNA 2'-O ribose methyltransferase substrate binding DDE06_07130 SM01022 DDE06_07130 DDE06_07170 SM00382 ATPases associated with a variety of cellular activities DDE06_07175 SM00493 DDE06_07175 DDE06_07185 SM00859 Semialdehyde dehydrogenase, NAD binding domain DDE06_07230 SM00382 ATPases associated with a variety of cellular activities DDE06_07235 SM00220 Serine/Threonine protein kinases, catalytic domain DDE06_07255 SM00382 ATPases associated with a variety of cellular activities DDE06_07280 SM00986 Uracil DNA glycosylase superfamily DDE06_07280 SM00987 UreE urease accessory protein, C-terminal domain DDE06_07315 SM00563 Phosphate acyltransferases DDE06_07320 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DDE06_07320 SM00387 Histidine kinase-like ATPases DDE06_07320 SM00388 His Kinase A (phosphoacceptor) domain DDE06_07325 SM00448 cheY-homologous receiver domain DDE06_07325 SM00862 Transcriptional regulatory protein, C terminal DDE06_07345 SM00357 Cold shock protein domain DDE06_07375 SM00899 DDE06_07375 DDE06_07410 SM00858 DDE06_07410 DDE06_07420 SM00852 Probable molybdopterin binding domain DDE06_07495 SM00382 ATPases associated with a variety of cellular activities DDE06_07500 SM00345 helix_turn_helix gluconate operon transcriptional repressor DDE06_07500 SM00866 DDE06_07500 DDE06_07520 SM00833 Cobalamin synthesis protein cobW C-terminal domain DDE06_07590 SM01061 CAT RNA binding domain DDE06_07625 SM01061 CAT RNA binding domain DDE06_07720 SM00382 ATPases associated with a variety of cellular activities DDE06_07805 SM01208 DDE06_07805 DDE06_07810 SM00650 Ribosomal RNA adenine dimethylases DDE06_07820 SM00382 ATPases associated with a variety of cellular activities DDE06_07825 SM00347 helix_turn_helix multiple antibiotic resistance protein DDE06_07835 SM00382 ATPases associated with a variety of cellular activities DDE06_07865 SM01400 DDE06_07865 DDE06_07880 SM00487 DEAD-like helicases superfamily DDE06_07880 SM00490 helicase superfamily c-terminal domain DDE06_07880 SM00982 DDE06_07880 DDE06_07880 SM01058 CarD-like/TRCF domain DDE06_07890 SM01192 DDE06_07890 DDE06_07890 SM01193 DDE06_07890 DDE06_07925 SM00382 ATPases associated with a variety of cellular activities DDE06_07935 SM00345 helix_turn_helix gluconate operon transcriptional repressor DDE06_07940 SM00382 ATPases associated with a variety of cellular activities DDE06_08030 SM00382 ATPases associated with a variety of cellular activities DDE06_08060 SM00530 Helix-turn-helix XRE-family like proteins DDE06_08075 SM00421 helix_turn_helix, Lux Regulon DDE06_08100 SM00642 Alpha-amylase domain DDE06_08120 SM00642 Alpha-amylase domain DDE06_08125 SM00354 helix_turn _helix lactose operon repressor DDE06_08180 SM00954 Region found in RelA / SpoT proteins DDE06_08235 SM00382 ATPases associated with a variety of cellular activities DDE06_08240 SM00382 ATPases associated with a variety of cellular activities DDE06_08270 SM00382 ATPases associated with a variety of cellular activities DDE06_08295 SM00354 helix_turn _helix lactose operon repressor DDE06_08325 SM00642 Alpha-amylase domain DDE06_08365 SM00729 Elongator protein 3, MiaB family, Radical SAM DDE06_08385 SM00382 ATPases associated with a variety of cellular activities DDE06_08400 SM00382 ATPases associated with a variety of cellular activities DDE06_08410 SM00838 Elongation factor G C-terminus DDE06_08440 SM00710 Parallel beta-helix repeats DDE06_08460 SM00448 cheY-homologous receiver domain DDE06_08460 SM00862 Transcriptional regulatory protein, C terminal DDE06_08465 SM00387 Histidine kinase-like ATPases DDE06_08465 SM00388 His Kinase A (phosphoacceptor) domain DDE06_08570 SM00984 UDP binding domain DDE06_08580 SM00382 ATPases associated with a variety of cellular activities DDE06_08695 SM00448 cheY-homologous receiver domain DDE06_08695 SM00862 Transcriptional regulatory protein, C terminal DDE06_08700 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DDE06_08700 SM00387 Histidine kinase-like ATPases DDE06_08700 SM00388 His Kinase A (phosphoacceptor) domain DDE06_08705 SM00909 Sporulation and spore germination DDE06_08800 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. DDE06_08805 SM00649 Ribosomal protein L11/L12 DDE06_08835 SM00663 RNA polymerase I subunit A N-terminus DDE06_08855 SM00838 Elongation factor G C-terminus DDE06_08855 SM00889 Elongation factor G, domain IV DDE06_08875 SM01403 DDE06_08875 DDE06_08895 SM01382 DDE06_08895 DDE06_08895 SM01383 DDE06_08895 DDE06_08910 SM00322 K homology RNA-binding domain DDE06_08930 SM01374 DDE06_08930 DDE06_08935 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. DDE06_08995 SM00316 Ribosomal protein S1-like RNA-binding domain DDE06_09015 SM00662 RNA polymerases D DDE06_09035 SM00422 helix_turn_helix, mercury resistance DDE06_09040 SM00382 ATPases associated with a variety of cellular activities DDE06_09050 SM00062 Bacterial periplasmic substrate-binding proteins DDE06_09080 SM00382 ATPases associated with a variety of cellular activities DDE06_09125 SM01005 Alanine racemase, C-terminal domain DDE06_09195 SM00883 Chaperonin 10 Kd subunit DDE06_09205 SM01001 AIR carboxylase DDE06_09230 SM01209 DDE06_09230 DDE06_09230 SM01210 DDE06_09230 DDE06_09235 SM01211 DDE06_09235 DDE06_09250 SM00116 Domain in cystathionine beta-synthase and other proteins. DDE06_09250 SM01240 DDE06_09250 DDE06_09255 SM00479 DDE06_09255 DDE06_09260 SM01240 DDE06_09260 DDE06_09275 SM00382 ATPases associated with a variety of cellular activities DDE06_09310 SM00530 Helix-turn-helix XRE-family like proteins DDE06_09335 SM00487 DEAD-like helicases superfamily DDE06_09355 SM00729 Elongator protein 3, MiaB family, Radical SAM DDE06_09370 SM00382 ATPases associated with a variety of cellular activities DDE06_09385 SM00382 ATPases associated with a variety of cellular activities DDE06_09390 SM00889 Elongation factor G, domain IV DDE06_09400 SM00530 Helix-turn-helix XRE-family like proteins DDE06_09430 SM00047 Lysozyme subfamily 2 DDE06_09510 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor DDE06_09555 SM00881 CoA binding domain DDE06_09570 SM00798 AICARFT/IMPCHase bienzyme DDE06_09570 SM00851 MGS-like domain DDE06_09645 SM00020 Trypsin-like serine protease DDE06_09700 SM00849 Metallo-beta-lactamase superfamily DDE06_09710 SM00893 Electron transfer flavoprotein domain DDE06_09740 SM00878 Biotin carboxylase C-terminal domain DDE06_09750 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. DDE06_09800 SM00382 ATPases associated with a variety of cellular activities DDE06_09820 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain DDE06_09830 SM01133 DDE06_09830 DDE06_09880 SM00924 MgtE intracellular N domain DDE06_09885 SM01011 Aminopeptidase P, N-terminal domain DDE06_09890 SM00481 DNA polymerase alpha chain like domain DDE06_09900 SM00487 DEAD-like helicases superfamily DDE06_09900 SM00490 helicase superfamily c-terminal domain DDE06_09960 SM00937 DDE06_09960 DDE06_09965 SM00382 ATPases associated with a variety of cellular activities DDE06_10015 SM00382 ATPases associated with a variety of cellular activities DDE06_10025 SM00347 helix_turn_helix multiple antibiotic resistance protein DDE06_10085 SM00411 bacterial (prokaryotic) histone like domain DDE06_10095 SM00487 DEAD-like helicases superfamily DDE06_10180 SM00354 helix_turn _helix lactose operon repressor DDE06_10240 SM00346 helix_turn_helix isocitrate lyase regulation DDE06_10285 SM00487 DEAD-like helicases superfamily DDE06_10285 SM00490 helicase superfamily c-terminal domain DDE06_10310 SM00358 Double-stranded RNA binding motif DDE06_10310 SM00535 Ribonuclease III family DDE06_10315 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain DDE06_10315 SM01232 DDE06_10315 DDE06_10320 SM00421 helix_turn_helix, Lux Regulon DDE06_10320 SM00448 cheY-homologous receiver domain DDE06_10335 SM00382 ATPases associated with a variety of cellular activities DDE06_10340 SM00382 ATPases associated with a variety of cellular activities DDE06_10345 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. DDE06_10350 SM00382 ATPases associated with a variety of cellular activities DDE06_10355 SM00382 ATPases associated with a variety of cellular activities DDE06_10375 SM00316 Ribosomal protein S1-like RNA-binding domain DDE06_10420 SM00855 Phosphoglycerate mutase family DDE06_10455 SM01007 Class II Aldolase and Adducin N-terminal domain DDE06_10470 SM00354 helix_turn _helix lactose operon repressor DDE06_10510 SM00421 helix_turn_helix, Lux Regulon DDE06_10525 SM00345 helix_turn_helix gluconate operon transcriptional repressor DDE06_10570 SM00382 ATPases associated with a variety of cellular activities DDE06_10590 SM00530 Helix-turn-helix XRE-family like proteins DDE06_10600 SM00014 Acid phosphatase homologues DDE06_10620 SM00382 ATPases associated with a variety of cellular activities DDE06_10640 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor DDE06_10655 SM00529 Helix-turn-helix diphteria tox regulatory element DDE06_10655 SM00899 DDE06_10655 DDE06_10675 SM00756 DDE06_10675 DDE06_10705 SM00278 Helix-hairpin-helix DNA-binding motif class 1 DDE06_10710 SM00849 Metallo-beta-lactamase superfamily DDE06_10720 SM01002 Alanine dehydrogenase/PNT, C-terminal domain DDE06_10720 SM01003 Alanine dehydrogenase/PNT, N-terminal domain DDE06_10755 SM00838 Elongation factor G C-terminus DDE06_10765 SM00729 Elongator protein 3, MiaB family, Radical SAM DDE06_10785 SM00271 DnaJ molecular chaperone homology domain