locus-tag class description EBQ11_00015 PF01741 Large-conductance mechanosensitive channel, MscL EBQ11_00020 PF01327 Polypeptide deformylase EBQ11_00030 PF01226 Formate/nitrite transporter EBQ11_00035 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EBQ11_00040 PF00528 Binding-protein-dependent transport system inner membrane component EBQ11_00050 PF00005 ABC transporter EBQ11_00050 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EBQ11_00055 PF00005 ABC transporter EBQ11_00055 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EBQ11_00085 PF00005 ABC transporter EBQ11_00085 PF08402 TOBE domain EBQ11_00090 PF00528 Binding-protein-dependent transport system inner membrane component EBQ11_00110 PF00356 Bacterial regulatory proteins, lacI family EBQ11_00115 PF00480 ROK family EBQ11_00120 PF00528 Binding-protein-dependent transport system inner membrane component EBQ11_00125 PF00528 Binding-protein-dependent transport system inner membrane component EBQ11_00135 PF01055 Glycosyl hydrolases family 31 EBQ11_00135 PF13802 Galactose mutarotase-like EBQ11_00145 PF01206 Sulfurtransferase TusA EBQ11_00150 PF04143 Sulphur transport EBQ11_00155 PF03971 Monomeric isocitrate dehydrogenase EBQ11_00170 PF02127 Aminopeptidase I zinc metalloprotease (M18) EBQ11_00175 PF13193 AMP-binding enzyme C-terminal domain EBQ11_00175 PF00501 AMP-binding enzyme EBQ11_00180 PF04055 Radical SAM superfamily EBQ11_00185 PF03099 Biotin/lipoate A/B protein ligase family EBQ11_00190 PF00528 Binding-protein-dependent transport system inner membrane component EBQ11_00195 PF12911 N-terminal TM domain of oligopeptide transport permease C EBQ11_00195 PF00528 Binding-protein-dependent transport system inner membrane component EBQ11_00200 PF00005 ABC transporter EBQ11_00200 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EBQ11_00205 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EBQ11_00210 PF00005 ABC transporter EBQ11_00210 PF00664 ABC transporter transmembrane region EBQ11_00215 PF00005 ABC transporter EBQ11_00215 PF00664 ABC transporter transmembrane region EBQ11_00240 PF00037 4Fe-4S binding domain EBQ11_00245 PF00155 Aminotransferase class I and II EBQ11_00250 PF00285 Citrate synthase, C-terminal domain EBQ11_00260 PF02545 Maf-like protein EBQ11_00270 PF16701 Adenylate cyclase regulatory domain EBQ11_00270 PF00211 Adenylate and Guanylate cyclase catalytic domain EBQ11_00275 PF00486 Transcriptional regulatory protein, C terminal EBQ11_00275 PF00072 Response regulator receiver domain EBQ11_00280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBQ11_00280 PF00512 His Kinase A (phospho-acceptor) domain EBQ11_00280 PF00672 HAMP domain EBQ11_00290 PF03816 Cell envelope-related transcriptional attenuator domain EBQ11_00295 PF03816 Cell envelope-related transcriptional attenuator domain EBQ11_00300 PF00535 Glycosyl transferase family 2 EBQ11_00300 PF00534 Glycosyl transferases group 1 EBQ11_00310 PF16363 GDP-mannose 4,6 dehydratase EBQ11_00325 PF00132 Bacterial transferase hexapeptide (six repeats) EBQ11_00330 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family EBQ11_00335 PF02894 Oxidoreductase family, C-terminal alpha/beta domain EBQ11_00335 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EBQ11_00370 PF02350 UDP-N-acetylglucosamine 2-epimerase EBQ11_00385 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain EBQ11_00385 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain EBQ11_00385 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain EBQ11_00395 PF14524 Wzt C-terminal domain EBQ11_00395 PF00005 ABC transporter EBQ11_00405 PF00535 Glycosyl transferase family 2 EBQ11_00405 PF00534 Glycosyl transferases group 1 EBQ11_00425 PF04321 RmlD substrate binding domain EBQ11_00430 PF00483 Nucleotidyl transferase EBQ11_00435 PF01758 Sodium Bile acid symporter family EBQ11_00445 PF00459 Inositol monophosphatase family EBQ11_00450 PF02467 Transcription factor WhiB EBQ11_00455 PF00535 Glycosyl transferase family 2 EBQ11_00455 PF00534 Glycosyl transferases group 1 EBQ11_00490 PF17863 AAA lid domain EBQ11_00490 PF07726 ATPase family associated with various cellular activities (AAA) EBQ11_00510 PF00486 Transcriptional regulatory protein, C terminal EBQ11_00510 PF00072 Response regulator receiver domain EBQ11_00515 PF00512 His Kinase A (phospho-acceptor) domain EBQ11_00515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBQ11_00515 PF00672 HAMP domain EBQ11_00520 PF10647 Lipoprotein LpqB beta-propeller domain EBQ11_00520 PF10646 Sporulation and spore germination EBQ11_00525 PF00156 Phosphoribosyl transferase domain EBQ11_00530 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein EBQ11_00530 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus EBQ11_00535 PF07992 Pyridine nucleotide-disulphide oxidoreductase EBQ11_00540 PF04461 Protein of unknown function (DUF520) EBQ11_00560 PF00471 Ribosomal protein L33 EBQ11_00575 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain EBQ11_00575 PF01565 FAD binding domain EBQ11_00590 PF00962 Adenosine/AMP deaminase EBQ11_00600 PF00155 Aminotransferase class I and II EBQ11_00610 PF00584 SecE/Sec61-gamma subunits of protein translocation complex EBQ11_00615 PF02357 Transcription termination factor nusG EBQ11_00620 PF00298 Ribosomal protein L11, RNA binding domain EBQ11_00620 PF03946 Ribosomal protein L11, N-terminal domain EBQ11_00625 PF00687 Ribosomal protein L1p/L10e family EBQ11_00630 PF00485 Phosphoribulokinase / Uridine kinase family EBQ11_00635 PF00466 Ribosomal protein L10 EBQ11_00640 PF16320 Ribosomal protein L7/L12 dimerisation domain EBQ11_00640 PF00542 Ribosomal protein L7/L12 C-terminal domain EBQ11_00645 PF10385 RNA polymerase beta subunit external 1 domain EBQ11_00645 PF04561 RNA polymerase Rpb2, domain 2 EBQ11_00645 PF04560 RNA polymerase Rpb2, domain 7 EBQ11_00645 PF00562 RNA polymerase Rpb2, domain 6 EBQ11_00645 PF04565 RNA polymerase Rpb2, domain 3 EBQ11_00645 PF04563 RNA polymerase beta subunit EBQ11_00650 PF05000 RNA polymerase Rpb1, domain 4 EBQ11_00650 PF04998 RNA polymerase Rpb1, domain 5 EBQ11_00650 PF04997 RNA polymerase Rpb1, domain 1 EBQ11_00650 PF00623 RNA polymerase Rpb1, domain 2 EBQ11_00650 PF04983 RNA polymerase Rpb1, domain 3 EBQ11_00655 PF00324 Amino acid permease EBQ11_00660 PF00164 Ribosomal protein S12/S23 EBQ11_00665 PF00177 Ribosomal protein S7p/S5e EBQ11_00670 PF00679 Elongation factor G C-terminus EBQ11_00670 PF03764 Elongation factor G, domain IV EBQ11_00670 PF00009 Elongation factor Tu GTP binding domain EBQ11_00670 PF03144 Elongation factor Tu domain 2 EBQ11_00670 PF14492 Elongation Factor G, domain II EBQ11_00675 PF03143 Elongation factor Tu C-terminal domain EBQ11_00675 PF03144 Elongation factor Tu domain 2 EBQ11_00675 PF00009 Elongation factor Tu GTP binding domain EBQ11_00680 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain EBQ11_00680 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain EBQ11_00685 PF13419 Haloacid dehalogenase-like hydrolase EBQ11_00690 PF00338 Ribosomal protein S10p/S20e EBQ11_00695 PF00297 Ribosomal protein L3 EBQ11_00700 PF00573 Ribosomal protein L4/L1 family EBQ11_00705 PF00276 Ribosomal protein L23 EBQ11_00710 PF00181 Ribosomal Proteins L2, RNA binding domain EBQ11_00710 PF03947 Ribosomal Proteins L2, C-terminal domain EBQ11_00715 PF00203 Ribosomal protein S19 EBQ11_00720 PF00237 Ribosomal protein L22p/L17e EBQ11_00725 PF07650 KH domain EBQ11_00725 PF00189 Ribosomal protein S3, C-terminal domain EBQ11_00730 PF00252 Ribosomal protein L16p/L10e EBQ11_00735 PF00831 Ribosomal L29 protein EBQ11_00740 PF00366 Ribosomal protein S17 EBQ11_00745 PF00238 Ribosomal protein L14p/L23e EBQ11_00750 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 EBQ11_00755 PF00281 Ribosomal protein L5 EBQ11_00755 PF00673 ribosomal L5P family C-terminus EBQ11_00760 PF00253 Ribosomal protein S14p/S29e EBQ11_00765 PF00410 Ribosomal protein S8 EBQ11_00770 PF00347 Ribosomal protein L6 EBQ11_00775 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast EBQ11_00780 PF03719 Ribosomal protein S5, C-terminal domain EBQ11_00780 PF00333 Ribosomal protein S5, N-terminal domain EBQ11_00785 PF00327 Ribosomal protein L30p/L7e EBQ11_00790 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A EBQ11_00795 PF00344 SecY translocase EBQ11_00805 PF00557 Metallopeptidase family M24 EBQ11_00810 PF01176 Translation initiation factor 1A / IF-1 EBQ11_00815 PF00444 Ribosomal protein L36 EBQ11_00820 PF00416 Ribosomal protein S13/S18 EBQ11_00825 PF00411 Ribosomal protein S11 EBQ11_00830 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain EBQ11_00830 PF01000 RNA polymerase Rpb3/RpoA insert domain EBQ11_00830 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain EBQ11_00835 PF01196 Ribosomal protein L17 EBQ11_00840 PF04461 Protein of unknown function (DUF520) EBQ11_00850 PF13411 MerR HTH family regulatory protein EBQ11_00850 PF07739 TipAS antibiotic-recognition domain EBQ11_00855 PF00005 ABC transporter EBQ11_00860 PF00528 Binding-protein-dependent transport system inner membrane component EBQ11_00870 PF00480 ROK family EBQ11_00875 PF01416 tRNA pseudouridine synthase EBQ11_00885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EBQ11_00885 PF03466 LysR substrate binding domain EBQ11_00895 PF12558 ATP-binding cassette cobalt transporter EBQ11_00895 PF00005 ABC transporter EBQ11_00900 PF07155 ECF-type riboflavin transporter, S component EBQ11_00910 PF00572 Ribosomal protein L13 EBQ11_00915 PF00380 Ribosomal protein S9/S16 EBQ11_00920 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III EBQ11_00920 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I EBQ11_00920 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain EBQ11_00920 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II EBQ11_00925 PF00485 Phosphoribulokinase / Uridine kinase family EBQ11_00930 PF01380 SIS domain EBQ11_00935 PF01256 Carbohydrate kinase EBQ11_00935 PF03853 YjeF-related protein N-terminus EBQ11_00940 PF01168 Alanine racemase, N-terminal domain EBQ11_00940 PF00842 Alanine racemase, C-terminal domain EBQ11_00945 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE EBQ11_00955 PF00814 Glycoprotease family EBQ11_00970 PF00890 FAD binding domain EBQ11_00970 PF02910 Fumarate reductase flavoprotein C-term EBQ11_00975 PF13183 4Fe-4S dicluster domain EBQ11_00975 PF13085 2Fe-2S iron-sulfur cluster binding domain EBQ11_00985 PF00209 Sodium:neurotransmitter symporter family EBQ11_00990 PF00814 Glycoprotease family EBQ11_00995 PF02535 ZIP Zinc transporter EBQ11_01010 PF00166 Chaperonin 10 Kd subunit EBQ11_01020 PF00731 AIR carboxylase EBQ11_01025 PF01259 SAICAR synthetase EBQ11_01030 PF00156 Phosphoribosyl transferase domain EBQ11_01030 PF13537 Glutamine amidotransferase domain EBQ11_01035 PF00586 AIR synthase related protein, N-terminal domain EBQ11_01035 PF02769 AIR synthase related protein, C-terminal domain EBQ11_01040 PF00551 Formyl transferase EBQ11_01045 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain EBQ11_01045 PF02843 Phosphoribosylglycinamide synthetase, C domain EBQ11_01045 PF02844 Phosphoribosylglycinamide synthetase, N domain EBQ11_01050 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain EBQ11_01050 PF02769 AIR synthase related protein, C-terminal domain EBQ11_01050 PF00586 AIR synthase related protein, N-terminal domain EBQ11_01060 PF02467 Transcription factor WhiB EBQ11_01065 PF00478 IMP dehydrogenase / GMP reductase domain EBQ11_01065 PF00571 CBS domain EBQ11_01075 PF00478 IMP dehydrogenase / GMP reductase domain EBQ11_01080 PF00206 Lyase EBQ11_01080 PF10415 Fumarase C C-terminus EBQ11_01090 PF00005 ABC transporter EBQ11_01105 PF00871 Acetokinase family EBQ11_01110 PF01515 Phosphate acetyl/butaryl transferase EBQ11_01110 PF07085 DRTGG domain EBQ11_01115 PF00849 RNA pseudouridylate synthase EBQ11_01120 PF00117 Glutamine amidotransferase class-I EBQ11_01120 PF00958 GMP synthase C terminal domain EBQ11_01120 PF02540 NAD synthase EBQ11_01135 PF00589 Phage integrase family EBQ11_01135 PF02899 Phage integrase, N-terminal SAM-like domain EBQ11_01170 PF04055 Radical SAM superfamily EBQ11_01175 PF01610 Transposase EBQ11_01175 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 EBQ11_01175 PF13542 Helix-turn-helix domain of transposase family ISL3 EBQ11_01180 PF00665 Integrase core domain EBQ11_01185 PF01695 IstB-like ATP binding protein EBQ11_01200 PF12102 Domain of unknown function (DUF3578) EBQ11_01200 PF07728 AAA domain (dynein-related subfamily) EBQ11_01205 PF00679 Elongation factor G C-terminus EBQ11_01205 PF03764 Elongation factor G, domain IV EBQ11_01205 PF00009 Elongation factor Tu GTP binding domain EBQ11_01205 PF14492 Elongation Factor G, domain II EBQ11_01245 PF00877 NlpC/P60 family EBQ11_01265 PF02534 Type IV secretory system Conjugative DNA transfer EBQ11_01280 PF01695 IstB-like ATP binding protein EBQ11_01280 PF07319 Primosomal protein DnaI N-terminus EBQ11_01305 PF03099 Biotin/lipoate A/B protein ligase family EBQ11_01305 PF10437 Bacterial lipoate protein ligase C-terminus EBQ11_01325 PF01022 Bacterial regulatory protein, arsR family EBQ11_01355 PF00580 UvrD/REP helicase N-terminal domain EBQ11_01355 PF13361 UvrD-like helicase C-terminal domain EBQ11_01360 PF01757 Acyltransferase family EBQ11_01365 PF00549 CoA-ligase EBQ11_01365 PF08442 ATP-grasp domain EBQ11_01370 PF02629 CoA binding domain EBQ11_01370 PF00549 CoA-ligase EBQ11_01385 PF02142 MGS-like domain EBQ11_01385 PF01808 AICARFT/IMPCHase bienzyme EBQ11_01395 PF00365 Phosphofructokinase EBQ11_01400 PF00342 Phosphoglucose isomerase EBQ11_01420 PF08386 TAP-like protein EBQ11_01420 PF00561 alpha/beta hydrolase fold EBQ11_01445 PF13936 Helix-turn-helix domain EBQ11_01445 PF00665 Integrase core domain EBQ11_01450 PF13936 Helix-turn-helix domain EBQ11_01450 PF00665 Integrase core domain EBQ11_01465 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain EBQ11_01465 PF00056 lactate/malate dehydrogenase, NAD binding domain EBQ11_01485 PF07859 alpha/beta hydrolase fold EBQ11_01490 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EBQ11_01490 PF02770 Acyl-CoA dehydrogenase, middle domain EBQ11_01490 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EBQ11_01495 PF02515 CoA-transferase family III EBQ11_01500 PF13193 AMP-binding enzyme C-terminal domain EBQ11_01500 PF00501 AMP-binding enzyme EBQ11_01510 PF00083 Sugar (and other) transporter EBQ11_01515 PF00753 Metallo-beta-lactamase superfamily EBQ11_01530 PF00766 Electron transfer flavoprotein FAD-binding domain EBQ11_01530 PF01012 Electron transfer flavoprotein domain EBQ11_01535 PF01494 FAD binding domain EBQ11_01545 PF13088 BNR repeat-like domain EBQ11_01545 PF00754 F5/8 type C domain EBQ11_01545 PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase EBQ11_01555 PF00364 Biotin-requiring enzyme EBQ11_01555 PF00289 Biotin carboxylase, N-terminal domain EBQ11_01555 PF02785 Biotin carboxylase C-terminal domain EBQ11_01555 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EBQ11_01560 PF01039 Carboxyl transferase domain EBQ11_01565 PF00698 Acyl transferase domain EBQ11_01570 PF01648 4'-phosphopantetheinyl transferase superfamily EBQ11_01575 PF02632 BioY family EBQ11_01580 PF00551 Formyl transferase EBQ11_01585 PF00464 Serine hydroxymethyltransferase EBQ11_01590 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain EBQ11_01590 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain EBQ11_01605 PF01050 Mannose-6-phosphate isomerase EBQ11_01605 PF00483 Nucleotidyl transferase EBQ11_01630 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region EBQ11_01635 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain EBQ11_01635 PF00591 Glycosyl transferase family, a/b domain EBQ11_01635 PF02885 Glycosyl transferase family, helical bundle domain EBQ11_01645 PF01791 DeoC/LacD family aldolase EBQ11_01650 PF07690 Major Facilitator Superfamily EBQ11_01655 PF00440 Bacterial regulatory proteins, tetR family EBQ11_01660 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I EBQ11_01660 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II EBQ11_01660 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III EBQ11_01660 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain EBQ11_01665 PF01048 Phosphorylase superfamily EBQ11_01670 PF03641 Possible lysine decarboxylase EBQ11_01680 PF01596 O-methyltransferase EBQ11_01685 PF01883 Iron-sulfur cluster assembly protein EBQ11_01685 PF10609 NUBPL iron-transfer P-loop NTPase EBQ11_01695 PF00571 CBS domain EBQ11_01695 PF01769 Divalent cation transporter EBQ11_01695 PF03448 MgtE intracellular N domain EBQ11_01700 PF00557 Metallopeptidase family M24 EBQ11_01700 PF05195 Aminopeptidase P, N-terminal domain EBQ11_01710 PF01914 MarC family integral membrane protein EBQ11_01715 PF00271 Helicase conserved C-terminal domain EBQ11_01715 PF00270 DEAD/DEAH box helicase EBQ11_01730 PF13361 UvrD-like helicase C-terminal domain EBQ11_01730 PF00580 UvrD/REP helicase N-terminal domain EBQ11_01740 PF00437 Type II/IV secretion system protein EBQ11_01775 PF03462 PCRF domain EBQ11_01775 PF00472 RF-1 domain EBQ11_01780 PF00005 ABC transporter EBQ11_01785 PF18075 FtsX extracellular domain EBQ11_01785 PF02687 FtsX-like permease family EBQ11_01790 PF04225 Opacity-associated protein A LysM-like domain EBQ11_01790 PF01551 Peptidase family M23 EBQ11_01795 PF01668 SmpB protein EBQ11_01800 PF13344 Haloacid dehalogenase-like hydrolase EBQ11_01805 PF17676 LD-carboxypeptidase C-terminal domain EBQ11_01805 PF02016 LD-carboxypeptidase N-terminal domain EBQ11_01830 PF17760 UvrA interaction domain EBQ11_01830 PF17755 UvrA DNA-binding domain EBQ11_01830 PF00005 ABC transporter EBQ11_01835 PF17755 UvrA DNA-binding domain EBQ11_01835 PF17760 UvrA interaction domain EBQ11_01840 PF01047 MarR family EBQ11_01865 PF00746 LPXTG cell wall anchor motif EBQ11_01865 PF06280 Fn3-like domain EBQ11_01865 PF02225 PA domain EBQ11_01865 PF00082 Subtilase family EBQ11_01880 PF02540 NAD synthase EBQ11_01895 PF02080 TrkA-C domain EBQ11_01895 PF06826 Predicted Permease Membrane Region EBQ11_01900 PF00216 Bacterial DNA-binding protein EBQ11_01910 PF04851 Type III restriction enzyme, res subunit EBQ11_01915 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain EBQ11_01915 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain EBQ11_01920 PF02617 ATP-dependent Clp protease adaptor protein ClpS EBQ11_01930 PF01177 Asp/Glu/Hydantoin racemase EBQ11_01935 PF12706 Beta-lactamase superfamily domain EBQ11_01940 PF01138 3' exoribonuclease family, domain 1 EBQ11_01940 PF03725 3' exoribonuclease family, domain 2 EBQ11_01945 PF01725 Ham1 family EBQ11_01960 PF00578 AhpC/TSA family EBQ11_01970 PF00501 AMP-binding enzyme EBQ11_01975 PF01557 Fumarylacetoacetate (FAA) hydrolase family EBQ11_01980 PF00155 Aminotransferase class I and II EBQ11_01985 PF00749 tRNA synthetases class I (E and Q), catalytic domain EBQ11_01995 PF00356 Bacterial regulatory proteins, lacI family EBQ11_02000 PF00528 Binding-protein-dependent transport system inner membrane component EBQ11_02005 PF00528 Binding-protein-dependent transport system inner membrane component EBQ11_02030 PF01432 Peptidase family M3 EBQ11_02040 PF06800 Sugar transport protein EBQ11_02050 PF13439 Glycosyltransferase Family 4 EBQ11_02050 PF00534 Glycosyl transferases group 1 EBQ11_02060 PF03577 Peptidase family C69 EBQ11_02070 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) EBQ11_02075 PF07478 D-ala D-ala ligase C-terminus EBQ11_02075 PF01820 D-ala D-ala ligase N-terminus EBQ11_02080 PF03358 NADPH-dependent FMN reductase EBQ11_02085 PF00586 AIR synthase related protein, N-terminal domain EBQ11_02085 PF02769 AIR synthase related protein, C-terminal domain EBQ11_02095 PF00830 Ribosomal L28 family EBQ11_02100 PF00270 DEAD/DEAH box helicase EBQ11_02100 PF00271 Helicase conserved C-terminal domain EBQ11_02100 PF17191 RecG wedge domain EBQ11_02110 PF01467 Cytidylyltransferase-like EBQ11_02120 PF02620 Large ribosomal RNA subunit accumulation protein YceD EBQ11_02125 PF00035 Double-stranded RNA binding motif EBQ11_02125 PF14622 Ribonuclease-III-like EBQ11_02130 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain EBQ11_02130 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain EBQ11_02130 PF06827 Zinc finger found in FPG and IleRS EBQ11_02135 PF00196 Bacterial regulatory proteins, luxR family EBQ11_02135 PF00072 Response regulator receiver domain EBQ11_02140 PF13192 Thioredoxin domain EBQ11_02140 PF07992 Pyridine nucleotide-disulphide oxidoreductase EBQ11_02145 PF10417 C-terminal domain of 1-Cys peroxiredoxin EBQ11_02145 PF00578 AhpC/TSA family EBQ11_02150 PF00664 ABC transporter transmembrane region EBQ11_02150 PF00005 ABC transporter EBQ11_02155 PF00005 ABC transporter EBQ11_02155 PF00664 ABC transporter transmembrane region EBQ11_02160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBQ11_02160 PF13185 GAF domain EBQ11_02160 PF07730 Histidine kinase EBQ11_02165 PF00005 ABC transporter EBQ11_02165 PF00664 ABC transporter transmembrane region EBQ11_02170 PF00005 ABC transporter EBQ11_02170 PF00664 ABC transporter transmembrane region EBQ11_02175 PF02322 Cytochrome bd terminal oxidase subunit II EBQ11_02180 PF01654 Cytochrome bd terminal oxidase subunit I EBQ11_02190 PF10150 Ribonuclease E/G family EBQ11_02195 PF00829 Ribosomal prokaryotic L21 protein EBQ11_02200 PF01016 Ribosomal L27 protein EBQ11_02205 PF09269 Domain of unknown function (DUF1967) EBQ11_02205 PF01926 50S ribosome-binding GTPase EBQ11_02205 PF01018 GTP1/OBG EBQ11_02215 PF00085 Thioredoxin EBQ11_02220 PF01467 Cytidylyltransferase-like EBQ11_02235 PF00300 Histidine phosphatase superfamily (branch 1) EBQ11_02260 PF07882 L-fucose isomerase, second N-terminal domain EBQ11_02260 PF02952 L-fucose isomerase, C-terminal domain EBQ11_02260 PF07881 L-fucose isomerase, first N-terminal domain EBQ11_02270 PF00596 Class II Aldolase and Adducin N-terminal domain EBQ11_02275 PF07690 Major Facilitator Superfamily EBQ11_02280 PF05025 RbsD / FucU transport protein family EBQ11_02285 PF00356 Bacterial regulatory proteins, lacI family EBQ11_02290 PF00291 Pyridoxal-phosphate dependent enzyme EBQ11_02295 PF01522 Polysaccharide deacetylase EBQ11_02315 PF00746 LPXTG cell wall anchor motif EBQ11_02315 PF16555 Gram-positive pilin subunit D1, N-terminal domain EBQ11_02340 PF00392 Bacterial regulatory proteins, gntR family EBQ11_02345 PF01680 SOR/SNZ family EBQ11_02360 PF03591 AzlC protein EBQ11_02370 PF00324 Amino acid permease EBQ11_02375 PF03180 NLPA lipoprotein EBQ11_02380 PF00528 Binding-protein-dependent transport system inner membrane component EBQ11_02385 PF00005 ABC transporter EBQ11_02385 PF09383 NIL domain EBQ11_02390 PF05683 Fumarase C-terminus EBQ11_02390 PF05681 Fumarate hydratase (Fumerase) EBQ11_02395 PF00324 Amino acid permease EBQ11_02405 PF01381 Helix-turn-helix EBQ11_02415 PF01569 PAP2 superfamily EBQ11_02425 PF00294 pfkB family carbohydrate kinase EBQ11_02430 PF00950 ABC 3 transport family EBQ11_02435 PF00005 ABC transporter EBQ11_02445 PF01297 Zinc-uptake complex component A periplasmic EBQ11_02455 PF01022 Bacterial regulatory protein, arsR family EBQ11_02465 PF00265 Thymidine kinase EBQ11_02470 PF00950 ABC 3 transport family EBQ11_02470 PF02742 Iron dependent repressor, metal binding and dimerisation domain EBQ11_02475 PF01048 Phosphorylase superfamily EBQ11_02480 PF01594 AI-2E family transporter EBQ11_02495 PF01230 HIT domain EBQ11_02500 PF08264 Anticodon-binding domain of tRNA EBQ11_02500 PF13603 Leucyl-tRNA synthetase, Domain 2 EBQ11_02500 PF09334 tRNA synthetases class I (M) EBQ11_02515 PF05872 Bacterial protein of unknown function (DUF853) EBQ11_02535 PF05222 Alanine dehydrogenase/PNT, N-terminal domain EBQ11_02535 PF01262 Alanine dehydrogenase/PNT, C-terminal domain EBQ11_02535 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch EBQ11_02540 PF02233 NAD(P) transhydrogenase beta subunit EBQ11_02545 PF01649 Ribosomal protein S20 EBQ11_02570 PF00679 Elongation factor G C-terminus EBQ11_02570 PF06421 GTP-binding protein LepA C-terminus EBQ11_02570 PF00009 Elongation factor Tu GTP binding domain EBQ11_02575 PF02390 Putative methyltransferase EBQ11_02580 PF04055 Radical SAM superfamily EBQ11_02595 PF01628 HrcA protein C terminal domain EBQ11_02595 PF08220 DeoR-like helix-turn-helix domain EBQ11_02600 PF01556 DnaJ C terminal domain EBQ11_02600 PF00226 DnaJ domain EBQ11_02600 PF00684 DnaJ central domain EBQ11_02605 PF04452 RNA methyltransferase EBQ11_02610 PF02562 PhoH-like protein EBQ11_02615 PF02130 Uncharacterized protein family UPF0054 EBQ11_02620 PF00571 CBS domain EBQ11_02620 PF03471 Transporter associated domain EBQ11_02620 PF01595 Cyclin M transmembrane N-terminal domain EBQ11_02625 PF01926 50S ribosome-binding GTPase EBQ11_02625 PF07650 KH domain EBQ11_02645 PF00069 Protein kinase domain EBQ11_02645 PF13191 AAA ATPase domain EBQ11_02650 PF00682 HMGL-like EBQ11_02650 PF08502 LeuA allosteric (dimerisation) domain EBQ11_02655 PF02565 Recombination protein O C terminal EBQ11_02655 PF11967 Recombination protein O N terminal EBQ11_02660 PF01255 Putative undecaprenyl diphosphate synthase EBQ11_02665 PF00815 Histidinol dehydrogenase EBQ11_02670 PF00155 Aminotransferase class I and II EBQ11_02675 PF00475 Imidazoleglycerol-phosphate dehydratase EBQ11_02685 PF00117 Glutamine amidotransferase class-I EBQ11_02690 PF00977 Histidine biosynthesis protein EBQ11_02700 PF05198 Translation initiation factor IF-3, N-terminal domain EBQ11_02700 PF00707 Translation initiation factor IF-3, C-terminal domain EBQ11_02705 PF01632 Ribosomal protein L35 EBQ11_02710 PF00453 Ribosomal protein L20 EBQ11_02720 PF00588 SpoU rRNA Methylase family EBQ11_02720 PF08032 RNA 2'-O ribose methyltransferase substrate binding EBQ11_02725 PF00724 NADH:flavin oxidoreductase / NADH oxidase family EBQ11_02730 PF01409 tRNA synthetases class II core domain (F) EBQ11_02730 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain EBQ11_02735 PF03147 Ferredoxin-fold anticodon binding domain EBQ11_02735 PF03483 B3/4 domain EBQ11_02735 PF01588 Putative tRNA binding domain EBQ11_02735 PF03484 tRNA synthetase B5 domain EBQ11_02735 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain EBQ11_02740 PF04073 Aminoacyl-tRNA editing domain EBQ11_02745 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus EBQ11_02745 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus EBQ11_02755 PF00202 Aminotransferase class-III EBQ11_02760 PF01316 Arginine repressor, DNA binding domain EBQ11_02760 PF02863 Arginine repressor, C-terminal domain EBQ11_02765 PF16363 GDP-mannose 4,6 dehydratase EBQ11_02775 PF01381 Helix-turn-helix EBQ11_02785 PF00005 ABC transporter EBQ11_02790 PF00579 tRNA synthetases class I (W and Y) EBQ11_02795 PF01297 Zinc-uptake complex component A periplasmic EBQ11_02800 PF00005 ABC transporter EBQ11_02805 PF00950 ABC 3 transport family EBQ11_02810 PF00950 ABC 3 transport family EBQ11_02840 PF18407 GCN5-related N-acetyltransferase like domain EBQ11_02840 PF13344 Haloacid dehalogenase-like hydrolase EBQ11_02845 PF01479 S4 domain EBQ11_02845 PF01728 FtsJ-like methyltransferase EBQ11_02850 PF01513 ATP-NAD kinase EBQ11_02855 PF02463 RecF/RecN/SMC N terminal domain EBQ11_02875 PF03023 Lipid II flippase MurJ EBQ11_02890 PF01458 Uncharacterized protein family (UPF0051) EBQ11_02895 PF01458 Uncharacterized protein family (UPF0051) EBQ11_02900 PF00355 Rieske [2Fe-2S] domain EBQ11_02905 PF00005 ABC transporter EBQ11_02910 PF00266 Aminotransferase class-V EBQ11_02920 PF01883 Iron-sulfur cluster assembly protein EBQ11_02925 PF00581 Rhodanese-like domain EBQ11_02930 PF12848 ABC transporter EBQ11_02930 PF00005 ABC transporter EBQ11_02935 PF00300 Histidine phosphatase superfamily (branch 1) EBQ11_02950 PF00005 ABC transporter EBQ11_02955 PF00483 Nucleotidyl transferase EBQ11_02960 PF00534 Glycosyl transferases group 1 EBQ11_02960 PF13439 Glycosyltransferase Family 4 EBQ11_02965 PF00005 ABC transporter EBQ11_02975 PF01145 SPFH domain / Band 7 family EBQ11_02980 PF00588 SpoU rRNA Methylase family EBQ11_02995 PF00588 SpoU rRNA Methylase family EBQ11_03000 PF01161 Phosphatidylethanolamine-binding protein EBQ11_03015 PF01336 OB-fold nucleic acid binding domain EBQ11_03015 PF02811 PHP domain EBQ11_03015 PF17657 Bacterial DNA polymerase III alpha subunit finger domain EBQ11_03015 PF07733 Bacterial DNA polymerase III alpha NTPase domain EBQ11_03015 PF14579 Helix-hairpin-helix motif EBQ11_03035 PF18317 Shikimate 5'-dehydrogenase C-terminal domain EBQ11_03035 PF08501 Shikimate dehydrogenase substrate binding domain EBQ11_03040 PF02540 NAD synthase EBQ11_03040 PF00958 GMP synthase C terminal domain EBQ11_03040 PF00117 Glutamine amidotransferase class-I EBQ11_03045 PF04107 Glutamate-cysteine ligase family 2(GCS2) EBQ11_03050 PF01546 Peptidase family M20/M25/M40 EBQ11_03050 PF07687 Peptidase dimerisation domain EBQ11_03065 PF02673 Bacitracin resistance protein BacA EBQ11_03070 PF13419 Haloacid dehalogenase-like hydrolase EBQ11_03080 PF08704 tRNA methyltransferase complex GCD14 subunit EBQ11_03085 PF17758 Proteasomal ATPase OB N-terminal domain EBQ11_03085 PF00004 ATPase family associated with various cellular activities (AAA) EBQ11_03085 PF16450 Proteasomal ATPase OB C-terminal domain EBQ11_03090 PF03136 Pup-ligase protein EBQ11_03095 PF05639 Pup-like protein EBQ11_03100 PF03136 Pup-ligase protein EBQ11_03115 PF00977 Histidine biosynthesis protein EBQ11_03120 PF01502 Phosphoribosyl-AMP cyclohydrolase EBQ11_03125 PF00218 Indole-3-glycerol phosphate synthase EBQ11_03130 PF01790 Prolipoprotein diacylglyceryl transferase EBQ11_03135 PF02887 Pyruvate kinase, alpha/beta domain EBQ11_03135 PF00224 Pyruvate kinase, barrel domain EBQ11_03145 PF03861 ANTAR domain EBQ11_03145 PF00072 Response regulator receiver domain EBQ11_03155 PF00476 DNA polymerase family A EBQ11_03155 PF01367 5'-3' exonuclease, C-terminal SAM fold EBQ11_03155 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain EBQ11_03160 PF00575 S1 RNA binding domain EBQ11_03170 PF00005 ABC transporter EBQ11_03175 PF01470 Pyroglutamyl peptidase EBQ11_03180 PF01121 Dephospho-CoA kinase EBQ11_03185 PF00271 Helicase conserved C-terminal domain EBQ11_03185 PF02151 UvrB/uvrC motif EBQ11_03185 PF12344 Ultra-violet resistance protein B EBQ11_03185 PF17757 UvrB interaction domain EBQ11_03185 PF04851 Type III restriction enzyme, res subunit EBQ11_03190 PF03741 Integral membrane protein TerC family EBQ11_03195 PF13593 SBF-like CPA transporter family (DUF4137) EBQ11_03205 PF17760 UvrA interaction domain EBQ11_03205 PF00005 ABC transporter EBQ11_03205 PF17755 UvrA DNA-binding domain EBQ11_03210 PF01541 GIY-YIG catalytic domain EBQ11_03210 PF02151 UvrB/uvrC motif EBQ11_03210 PF08459 UvrC Helix-hairpin-helix N-terminal EBQ11_03215 PF03668 P-loop ATPase protein family EBQ11_03220 PF01933 Uncharacterised protein family UPF0052 EBQ11_03225 PF02650 WhiA C-terminal HTH domain EBQ11_03225 PF10298 WhiA N-terminal LAGLIDADG-like domain EBQ11_03225 PF14527 WhiA LAGLIDADG-like domain EBQ11_03230 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain EBQ11_03230 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain EBQ11_03235 PF00162 Phosphoglycerate kinase EBQ11_03240 PF00121 Triosephosphate isomerase EBQ11_03245 PF03840 Preprotein translocase SecG subunit EBQ11_03255 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain EBQ11_03255 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain EBQ11_03260 PF00923 Transaldolase/Fructose-6-phosphate aldolase EBQ11_03265 PF02779 Transketolase, pyrimidine binding domain EBQ11_03265 PF02780 Transketolase, C-terminal domain EBQ11_03265 PF00456 Transketolase, thiamine diphosphate binding domain EBQ11_03270 PF00589 Phage integrase family EBQ11_03270 PF02899 Phage integrase, N-terminal SAM-like domain EBQ11_03275 PF13614 AAA domain EBQ11_03280 PF02616 Segregation and condensation protein ScpA EBQ11_03285 PF04079 Segregation and condensation complex subunit ScpB EBQ11_03290 PF01479 S4 domain EBQ11_03290 PF00849 RNA pseudouridylate synthase EBQ11_03300 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal EBQ11_03300 PF01926 50S ribosome-binding GTPase EBQ11_03305 PF00365 Phosphofructokinase EBQ11_03320 PF11838 ERAP1-like C-terminal domain EBQ11_03320 PF01433 Peptidase family M1 domain EBQ11_03325 PF00498 FHA domain EBQ11_03335 PF13411 MerR HTH family regulatory protein EBQ11_03345 PF13397 RNA polymerase-binding protein EBQ11_03350 PF00535 Glycosyl transferase family 2 EBQ11_03355 PF00795 Carbon-nitrogen hydrolase EBQ11_03355 PF00535 Glycosyl transferase family 2 EBQ11_03360 PF00271 Helicase conserved C-terminal domain EBQ11_03360 PF00270 DEAD/DEAH box helicase EBQ11_03360 PF08148 DSHCT (NUC185) domain EBQ11_03365 PF00781 Diacylglycerol kinase catalytic domain EBQ11_03390 PF01634 ATP phosphoribosyltransferase EBQ11_03390 PF08029 HisG, C-terminal domain EBQ11_03395 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase EBQ11_03400 PF09084 NMT1/THI5 like EBQ11_03405 PF00528 Binding-protein-dependent transport system inner membrane component EBQ11_03410 PF00834 Ribulose-phosphate 3 epimerase family EBQ11_03415 PF01189 16S rRNA methyltransferase RsmB/F EBQ11_03415 PF01029 NusB family EBQ11_03420 PF02911 Formyl transferase, C-terminal domain EBQ11_03420 PF00551 Formyl transferase EBQ11_03425 PF17764 3′ DNA-binding domain (3′BD) EBQ11_03430 PF02772 S-adenosylmethionine synthetase, central domain EBQ11_03430 PF02773 S-adenosylmethionine synthetase, C-terminal domain EBQ11_03430 PF00438 S-adenosylmethionine synthetase, N-terminal domain EBQ11_03435 PF04127 DNA / pantothenate metabolism flavoprotein EBQ11_03435 PF02441 Flavoprotein EBQ11_03440 PF01192 RNA polymerase Rpb6 EBQ11_03445 PF00625 Guanylate kinase EBQ11_03455 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain EBQ11_03455 PF02142 MGS-like domain EBQ11_03455 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EBQ11_03460 PF00117 Glutamine amidotransferase class-I EBQ11_03460 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain EBQ11_03465 PF01029 NusB family EBQ11_03470 PF01132 Elongation factor P (EF-P) OB domain EBQ11_03470 PF08207 Elongation factor P (EF-P) KOW-like domain EBQ11_03470 PF09285 Elongation factor P, C-terminal EBQ11_03475 PF00403 Heavy-metal-associated domain EBQ11_03480 PF01202 Shikimate kinase EBQ11_03485 PF01202 Shikimate kinase EBQ11_03485 PF01761 3-dehydroquinate synthase EBQ11_03490 PF01264 Chorismate synthase EBQ11_03510 PF03652 Holliday junction resolvase EBQ11_03515 PF02272 DHHA1 domain EBQ11_03515 PF01411 tRNA synthetases class II (A) EBQ11_03515 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain EBQ11_03525 PF01479 S4 domain EBQ11_03525 PF00163 Ribosomal protein S4/S9 N-terminal domain EBQ11_03530 PF12002 MgsA AAA+ ATPase C terminal EBQ11_03530 PF00004 ATPase family associated with various cellular activities (AAA) EBQ11_03530 PF16193 AAA C-terminal domain EBQ11_03535 PF03176 MMPL family EBQ11_03550 PF00152 tRNA synthetases class II (D, K and N) EBQ11_03550 PF02938 GAD domain EBQ11_03550 PF01336 OB-fold nucleic acid binding domain EBQ11_03560 PF00270 DEAD/DEAH box helicase EBQ11_03560 PF03880 DbpA RNA binding domain EBQ11_03560 PF00271 Helicase conserved C-terminal domain EBQ11_03570 PF07650 KH domain EBQ11_03570 PF01926 50S ribosome-binding GTPase EBQ11_03575 PF01926 50S ribosome-binding GTPase EBQ11_03575 PF07650 KH domain EBQ11_03580 PF03129 Anticodon binding domain EBQ11_03580 PF13393 Histidyl-tRNA synthetase EBQ11_03585 PF00753 Metallo-beta-lactamase superfamily EBQ11_03590 PF03993 Domain of Unknown Function (DUF349) EBQ11_03600 PF13291 ACT domain EBQ11_03600 PF02824 TGS domain EBQ11_03600 PF04607 Region found in RelA / SpoT proteins EBQ11_03605 PF00156 Phosphoribosyl transferase domain EBQ11_03610 PF02355 Protein export membrane protein EBQ11_03610 PF07549 SecD/SecF GG Motif EBQ11_03615 PF07549 SecD/SecF GG Motif EBQ11_03615 PF02355 Protein export membrane protein EBQ11_03625 PF05496 Holliday junction DNA helicase RuvB P-loop domain EBQ11_03625 PF05491 RuvB C-terminal winged helix domain EBQ11_03625 PF17864 RuvB AAA lid domain EBQ11_03630 PF01330 RuvA N terminal domain EBQ11_03630 PF07499 RuvA, C-terminal domain EBQ11_03635 PF02075 Crossover junction endodeoxyribonuclease RuvC EBQ11_03640 PF01709 Transcriptional regulator EBQ11_03645 PF00293 NUDIX domain EBQ11_03655 PF13439 Glycosyltransferase Family 4 EBQ11_03670 PF03129 Anticodon binding domain EBQ11_03670 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EBQ11_03670 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain EBQ11_03675 PF03313 Serine dehydratase alpha chain EBQ11_03675 PF03315 Serine dehydratase beta chain EBQ11_03680 PF00072 Response regulator receiver domain EBQ11_03680 PF00196 Bacterial regulatory proteins, luxR family EBQ11_03700 PF00082 Subtilase family EBQ11_03700 PF05922 Peptidase inhibitor I9 EBQ11_03725 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) EBQ11_03725 PF00128 Alpha amylase, catalytic domain EBQ11_03730 PF00128 Alpha amylase, catalytic domain EBQ11_03735 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) EBQ11_03735 PF00128 Alpha amylase, catalytic domain EBQ11_03750 PF02780 Transketolase, C-terminal domain EBQ11_03750 PF02779 Transketolase, pyrimidine binding domain EBQ11_03750 PF13292 1-deoxy-D-xylulose-5-phosphate synthase EBQ11_03760 PF00330 Aconitase family (aconitate hydratase) EBQ11_03760 PF00694 Aconitase C-terminal domain EBQ11_03765 PF05958 tRNA (Uracil-5-)-methyltransferase EBQ11_03775 PF02080 TrkA-C domain EBQ11_03775 PF02254 TrkA-N domain EBQ11_03780 PF02080 TrkA-C domain EBQ11_03780 PF02254 TrkA-N domain EBQ11_03820 PF03989 DNA gyrase C-terminal domain, beta-propeller EBQ11_03820 PF00521 DNA gyrase/topoisomerase IV, subunit A EBQ11_03835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBQ11_03835 PF01751 Toprim domain EBQ11_03835 PF00986 DNA gyrase B subunit, carboxyl terminus EBQ11_03835 PF00204 DNA gyrase B EBQ11_03845 PF00929 Exonuclease EBQ11_03845 PF04851 Type III restriction enzyme, res subunit EBQ11_03845 PF13307 Helicase C-terminal domain EBQ11_03850 PF00140 Sigma-70 factor, region 1.2 EBQ11_03850 PF04539 Sigma-70 region 3 EBQ11_03850 PF04545 Sigma-70, region 4 EBQ11_03850 PF04542 Sigma-70 region 2 EBQ11_03875 PF01464 Transglycosylase SLT domain EBQ11_03875 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain EBQ11_03880 PF03793 PASTA domain EBQ11_03880 PF00069 Protein kinase domain EBQ11_03885 PF01474 Class-II DAHP synthetase family EBQ11_03890 PF00365 Phosphofructokinase EBQ11_03900 PF01541 GIY-YIG catalytic domain EBQ11_03900 PF00929 Exonuclease EBQ11_03910 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain EBQ11_03910 PF02777 Iron/manganese superoxide dismutases, C-terminal domain EBQ11_03920 PF01521 Iron-sulphur cluster biosynthesis EBQ11_03930 PF07687 Peptidase dimerisation domain EBQ11_03930 PF01546 Peptidase family M20/M25/M40 EBQ11_03945 PF00883 Cytosol aminopeptidase family, catalytic domain EBQ11_03945 PF02789 Cytosol aminopeptidase family, N-terminal domain EBQ11_03955 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EBQ11_03955 PF07992 Pyridine nucleotide-disulphide oxidoreductase EBQ11_03960 PF02817 e3 binding domain EBQ11_03960 PF00364 Biotin-requiring enzyme EBQ11_03960 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) EBQ11_03980 PF00120 Glutamine synthetase, catalytic domain EBQ11_03980 PF03951 Glutamine synthetase, beta-Grasp domain EBQ11_03990 PF03710 Glutamate-ammonia ligase adenylyltransferase EBQ11_03990 PF08335 GlnD PII-uridylyltransferase EBQ11_03995 PF00120 Glutamine synthetase, catalytic domain EBQ11_03995 PF03951 Glutamine synthetase, beta-Grasp domain EBQ11_04005 PF00557 Metallopeptidase family M24 EBQ11_04010 PF00480 ROK family EBQ11_04020 PF03883 Peroxide stress protein YaaA EBQ11_04030 PF01784 NIF3 (NGG1p interacting factor 3) EBQ11_04035 PF02537 CrcB-like protein, Camphor Resistance (CrcB) EBQ11_04040 PF02537 CrcB-like protein, Camphor Resistance (CrcB) EBQ11_04050 PF03714 Bacterial pullanase-associated domain EBQ11_04050 PF02806 Alpha amylase, C-terminal all-beta domain EBQ11_04050 PF00128 Alpha amylase, catalytic domain EBQ11_04065 PF17831 Pyruvate dehydrogenase E1 component middle domain EBQ11_04065 PF00456 Transketolase, thiamine diphosphate binding domain EBQ11_04070 PF00005 ABC transporter EBQ11_04070 PF00664 ABC transporter transmembrane region EBQ11_04075 PF00664 ABC transporter transmembrane region EBQ11_04075 PF00005 ABC transporter EBQ11_04085 PF01300 Telomere recombination EBQ11_04105 PF01370 NAD dependent epimerase/dehydratase family EBQ11_04105 PF08338 Domain of unknown function (DUF1731) EBQ11_04110 PF01327 Polypeptide deformylase EBQ11_04140 PF00005 ABC transporter EBQ11_04145 PF01032 FecCD transport family EBQ11_04175 PF02416 mttA/Hcf106 family EBQ11_04180 PF02416 mttA/Hcf106 family EBQ11_04185 PF00902 Sec-independent protein translocase protein (TatC) EBQ11_04195 PF01807 CHC2 zinc finger EBQ11_04195 PF08275 DNA primase catalytic core, N-terminal domain EBQ11_04195 PF13662 Toprim domain EBQ11_04195 PF08278 DNA primase DnaG DnaB-binding EBQ11_04195 PF10410 DnaB-helicase binding domain of primase EBQ11_04200 PF13286 Phosphohydrolase-associated domain EBQ11_04200 PF01966 HD domain EBQ11_04210 PF01207 Dihydrouridine synthase (Dus) EBQ11_04220 PF03129 Anticodon binding domain EBQ11_04220 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EBQ11_04230 PF00005 ABC transporter EBQ11_04235 PF00950 ABC 3 transport family EBQ11_04240 PF01475 Ferric uptake regulator family EBQ11_04255 PF07733 Bacterial DNA polymerase III alpha NTPase domain EBQ11_04255 PF14579 Helix-hairpin-helix motif EBQ11_04255 PF17657 Bacterial DNA polymerase III alpha subunit finger domain EBQ11_04255 PF02811 PHP domain EBQ11_04265 PF00849 RNA pseudouridylate synthase EBQ11_04270 PF01252 Signal peptidase (SPase) II EBQ11_04285 PF04472 Cell division protein SepF EBQ11_04295 PF12327 FtsZ family, C-terminal domain EBQ11_04295 PF00091 Tubulin/FtsZ family, GTPase domain EBQ11_04305 PF01225 Mur ligase family, catalytic domain EBQ11_04305 PF02875 Mur ligase family, glutamate ligase domain EBQ11_04305 PF08245 Mur ligase middle domain EBQ11_04310 PF04101 Glycosyltransferase family 28 C-terminal domain EBQ11_04310 PF03033 Glycosyltransferase family 28 N-terminal domain EBQ11_04315 PF01098 Cell cycle protein EBQ11_04320 PF08245 Mur ligase middle domain EBQ11_04320 PF02875 Mur ligase family, glutamate ligase domain EBQ11_04325 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 EBQ11_04325 PF00953 Glycosyl transferase family 4 EBQ11_04330 PF01225 Mur ligase family, catalytic domain EBQ11_04330 PF08245 Mur ligase middle domain EBQ11_04330 PF02875 Mur ligase family, glutamate ligase domain EBQ11_04335 PF08245 Mur ligase middle domain EBQ11_04335 PF01225 Mur ligase family, catalytic domain EBQ11_04335 PF02875 Mur ligase family, glutamate ligase domain EBQ11_04340 PF00905 Penicillin binding protein transpeptidase domain EBQ11_04340 PF03717 Penicillin-binding Protein dimerisation domain EBQ11_04350 PF01795 MraW methylase family EBQ11_04355 PF02381 MraZ protein, putative antitoxin-like EBQ11_04385 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EBQ11_04385 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EBQ11_04390 PF13193 AMP-binding enzyme C-terminal domain EBQ11_04390 PF00501 AMP-binding enzyme EBQ11_04395 PF03477 ATP cone domain EBQ11_04405 PF01726 LexA DNA binding domain EBQ11_04405 PF00717 Peptidase S24-like EBQ11_04410 PF13307 Helicase C-terminal domain EBQ11_04415 PF01926 50S ribosome-binding GTPase EBQ11_04415 PF13167 GTP-binding GTPase N-terminal EBQ11_04415 PF16360 GTP-binding GTPase Middle Region EBQ11_04420 PF08468 Methyltransferase small domain N-terminal EBQ11_04420 PF05175 Methyltransferase small domain EBQ11_04430 PF00919 Uncharacterized protein family UPF0004 EBQ11_04430 PF04055 Radical SAM superfamily EBQ11_04435 PF02631 RecX family EBQ11_04440 PF00154 recA bacterial DNA recombination protein EBQ11_04455 PF18146 Damage-inducible protein CinA KH domain EBQ11_04455 PF02464 Competence-damaged protein EBQ11_04455 PF00994 Probable molybdopterin binding domain EBQ11_04470 PF17854 FtsK alpha domain EBQ11_04470 PF09397 Ftsk gamma domain EBQ11_04470 PF01580 FtsK/SpoIIIE family EBQ11_04475 PF12706 Beta-lactamase superfamily domain EBQ11_04475 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain EBQ11_04475 PF17770 Ribonuclease J C-terminal domain EBQ11_04480 PF00701 Dihydrodipicolinate synthetase family EBQ11_04490 PF12419 SNF2 Helicase protein EBQ11_04490 PF00271 Helicase conserved C-terminal domain EBQ11_04490 PF00176 SNF2 family N-terminal domain EBQ11_04495 PF05173 Dihydrodipicolinate reductase, C-terminus EBQ11_04495 PF01113 Dihydrodipicolinate reductase, N-terminus EBQ11_04500 PF05193 Peptidase M16 inactive domain EBQ11_04500 PF00675 Insulinase (Peptidase family M16) EBQ11_04510 PF00013 KH domain EBQ11_04510 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain EBQ11_04510 PF01138 3' exoribonuclease family, domain 1 EBQ11_04510 PF00575 S1 RNA binding domain EBQ11_04515 PF00312 Ribosomal protein S15 EBQ11_04525 PF00005 ABC transporter EBQ11_04535 PF01687 Riboflavin kinase EBQ11_04535 PF06574 FAD synthetase EBQ11_04555 PF00005 ABC transporter EBQ11_04555 PF08402 TOBE domain EBQ11_04565 PF07690 Major Facilitator Superfamily EBQ11_04570 PF00486 Transcriptional regulatory protein, C terminal EBQ11_04570 PF00072 Response regulator receiver domain EBQ11_04575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBQ11_04575 PF00512 His Kinase A (phospho-acceptor) domain EBQ11_04575 PF00989 PAS fold EBQ11_04580 PF09142 tRNA Pseudouridine synthase II, C terminal EBQ11_04580 PF16198 tRNA pseudouridylate synthase B C-terminal domain EBQ11_04580 PF01509 TruB family pseudouridylate synthase (N terminal domain) EBQ11_04585 PF02033 Ribosome-binding factor A EBQ11_04590 PF11987 Translation-initiation factor 2 EBQ11_04590 PF00009 Elongation factor Tu GTP binding domain EBQ11_04590 PF04760 Translation initiation factor IF-2, N-terminal region EBQ11_04600 PF13184 NusA-like KH domain EBQ11_04600 PF08529 NusA N-terminal domain EBQ11_04605 PF02576 RimP N-terminal domain EBQ11_04605 PF17384 RimP C-terminal SH3 domain EBQ11_04615 PF04073 Aminoacyl-tRNA editing domain EBQ11_04615 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EBQ11_04615 PF03129 Anticodon binding domain EBQ11_04625 PF04551 GcpE protein EBQ11_04630 PF02163 Peptidase family M50 EBQ11_04630 PF17820 PDZ domain EBQ11_04635 PF13288 DXP reductoisomerase C-terminal domain EBQ11_04635 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain EBQ11_04635 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase EBQ11_04645 PF04055 Radical SAM superfamily EBQ11_04655 PF01765 Ribosome recycling factor EBQ11_04660 PF00696 Amino acid kinase family EBQ11_04670 PF07690 Major Facilitator Superfamily EBQ11_04680 PF01494 FAD binding domain EBQ11_04685 PF01012 Electron transfer flavoprotein domain EBQ11_04685 PF00766 Electron transfer flavoprotein FAD-binding domain EBQ11_04690 PF01012 Electron transfer flavoprotein domain EBQ11_04695 PF00889 Elongation factor TS EBQ11_04700 PF00318 Ribosomal protein S2 EBQ11_04705 PF03458 UPF0126 domain EBQ11_04710 PF01551 Peptidase family M23 EBQ11_04715 PF00589 Phage integrase family EBQ11_04715 PF02899 Phage integrase, N-terminal SAM-like domain EBQ11_04720 PF02481 DNA recombination-mediator protein A EBQ11_04720 PF17782 DprA winged helix domain EBQ11_04725 PF01078 Magnesium chelatase, subunit ChlI EBQ11_04725 PF13335 Magnesium chelatase, subunit ChlI C-terminal EBQ11_04730 PF02021 Uncharacterised protein family UPF0102 EBQ11_04735 PF10611 Protein of unknown function (DUF2469) EBQ11_04740 PF01351 Ribonuclease HII EBQ11_04745 PF10502 Signal peptidase, peptidase S26 EBQ11_04750 PF01245 Ribosomal protein L19 EBQ11_04755 PF01746 tRNA (Guanine-1)-methyltransferase EBQ11_04760 PF01782 RimM N-terminal domain EBQ11_04760 PF05239 PRC-barrel domain EBQ11_04770 PF00886 Ribosomal protein S16 EBQ11_04775 PF01545 Cation efflux family EBQ11_04775 PF16916 Dimerisation domain of Zinc Transporter EBQ11_04785 PF01979 Amidohydrolase family EBQ11_04790 PF00448 SRP54-type protein, GTPase domain EBQ11_04790 PF02978 Signal peptide binding domain EBQ11_04790 PF02881 SRP54-type protein, helical bundle domain EBQ11_04795 PF02881 SRP54-type protein, helical bundle domain EBQ11_04795 PF00448 SRP54-type protein, GTPase domain EBQ11_04800 PF17440 Thiol-activated cytolysin beta sandwich domain EBQ11_04800 PF01289 Thiol-activated cytolysin EBQ11_04810 PF06470 SMC proteins Flexible Hinge Domain EBQ11_04810 PF02463 RecF/RecN/SMC N terminal domain EBQ11_04815 PF00334 Nucleoside diphosphate kinase EBQ11_04820 PF08245 Mur ligase middle domain EBQ11_04820 PF02875 Mur ligase family, glutamate ligase domain EBQ11_04825 PF08264 Anticodon-binding domain of tRNA EBQ11_04825 PF00133 tRNA synthetases class I (I, L, M and V) EBQ11_04840 PF03807 NADP oxidoreductase coenzyme F420-dependent EBQ11_04840 PF14748 Pyrroline-5-carboxylate reductase dimerisation EBQ11_04850 PF08264 Anticodon-binding domain of tRNA EBQ11_04850 PF00133 tRNA synthetases class I (I, L, M and V) EBQ11_04855 PF00501 AMP-binding enzyme EBQ11_04860 PF02153 Prephenate dehydrogenase EBQ11_04860 PF01817 Chorismate mutase type II EBQ11_04865 PF10431 C-terminal, D2-small domain, of ClpB protein EBQ11_04865 PF07724 AAA domain (Cdc48 subfamily) EBQ11_04865 PF06689 ClpX C4-type zinc finger EBQ11_04870 PF00574 Clp protease EBQ11_04875 PF00574 Clp protease EBQ11_04880 PF05698 Bacterial trigger factor protein (TF) C-terminus EBQ11_04880 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EBQ11_04880 PF05697 Bacterial trigger factor protein (TF) EBQ11_04885 PF00248 Aldo/keto reductase family EBQ11_04895 PF00933 Glycosyl hydrolase family 3 N terminal domain EBQ11_04905 PF02837 Glycosyl hydrolases family 2, sugar binding domain EBQ11_04905 PF02836 Glycosyl hydrolases family 2, TIM barrel domain EBQ11_04905 PF00703 Glycosyl hydrolases family 2 EBQ11_04910 PF00356 Bacterial regulatory proteins, lacI family EBQ11_04940 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EBQ11_04940 PF07992 Pyridine nucleotide-disulphide oxidoreductase EBQ11_04950 PF01783 Ribosomal L32p protein family EBQ11_04955 PF01205 Uncharacterized protein family UPF0029 EBQ11_04955 PF09186 Domain of unknown function (DUF1949) EBQ11_04960 PF00291 Pyridoxal-phosphate dependent enzyme EBQ11_04965 PF00132 Bacterial transferase hexapeptide (six repeats) EBQ11_04975 PF02502 Ribose/Galactose Isomerase EBQ11_04980 PF05649 Peptidase family M13 EBQ11_04980 PF01431 Peptidase family M13 EBQ11_04985 PF05661 Protein of unknown function (DUF808) EBQ11_04990 PF11838 ERAP1-like C-terminal domain EBQ11_04990 PF01433 Peptidase family M1 domain EBQ11_04995 PF00117 Glutamine amidotransferase class-I EBQ11_04995 PF03352 Methyladenine glycosylase EBQ11_04995 PF13673 Acetyltransferase (GNAT) domain EBQ11_04995 PF00958 GMP synthase C terminal domain EBQ11_04995 PF13302 Acetyltransferase (GNAT) domain EBQ11_05005 PF02446 4-alpha-glucanotransferase EBQ11_05015 PF00005 ABC transporter EBQ11_05015 PF12848 ABC transporter EBQ11_05040 PF00929 Exonuclease EBQ11_05060 PF00535 Glycosyl transferase family 2 EBQ11_05070 PF00535 Glycosyl transferase family 2 EBQ11_05085 PF00535 Glycosyl transferase family 2 EBQ11_05100 PF01501 Glycosyl transferase family 8 EBQ11_05100 PF00535 Glycosyl transferase family 2 EBQ11_05105 PF04991 LicD family EBQ11_05110 PF12804 MobA-like NTP transferase domain EBQ11_05115 PF13439 Glycosyltransferase Family 4 EBQ11_05115 PF00534 Glycosyl transferases group 1 EBQ11_05125 PF00270 DEAD/DEAH box helicase EBQ11_05125 PF08148 DSHCT (NUC185) domain EBQ11_05125 PF00271 Helicase conserved C-terminal domain EBQ11_05130 PF01168 Alanine racemase, N-terminal domain EBQ11_05135 PF04055 Radical SAM superfamily EBQ11_05140 PF02901 Pyruvate formate lyase-like EBQ11_05140 PF01228 Glycine radical EBQ11_05145 PF01228 Glycine radical EBQ11_05145 PF02901 Pyruvate formate lyase-like EBQ11_05155 PF01063 Amino-transferase class IV EBQ11_05160 PF00180 Isocitrate/isopropylmalate dehydrogenase EBQ11_05175 PF00206 Lyase EBQ11_05175 PF10415 Fumarase C C-terminus EBQ11_05185 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain EBQ11_05185 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain EBQ11_05190 PF10369 Small subunit of acetolactate synthase EBQ11_05195 PF00205 Thiamine pyrophosphate enzyme, central domain EBQ11_05195 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain EBQ11_05195 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain EBQ11_05200 PF02080 TrkA-C domain EBQ11_05200 PF06826 Predicted Permease Membrane Region EBQ11_05205 PF00920 Dehydratase family EBQ11_05210 PF08241 Methyltransferase domain EBQ11_05250 PF00390 Malic enzyme, N-terminal domain EBQ11_05250 PF03949 Malic enzyme, NAD binding domain EBQ11_05255 PF02637 GatB domain EBQ11_05255 PF02934 GatB/GatE catalytic domain EBQ11_05260 PF01425 Amidase EBQ11_05265 PF02686 Glu-tRNAGln amidotransferase C subunit EBQ11_05270 PF13396 Phospholipase_D-nuclease N-terminal EBQ11_05270 PF13091 PLD-like domain EBQ11_05275 PF04151 Bacterial pre-peptidase C-terminal domain EBQ11_05275 PF00082 Subtilase family EBQ11_05280 PF02661 Fic/DOC family EBQ11_05280 PF13784 Fic/DOC family N-terminal EBQ11_05285 PF00294 pfkB family carbohydrate kinase EBQ11_05295 PF03747 ADP-ribosylglycohydrolase EBQ11_05300 PF00392 Bacterial regulatory proteins, gntR family EBQ11_05300 PF07702 UTRA domain EBQ11_05305 PF12826 Helix-hairpin-helix motif EBQ11_05305 PF03119 NAD-dependent DNA ligase C4 zinc finger domain EBQ11_05305 PF01653 NAD-dependent DNA ligase adenylation domain EBQ11_05305 PF00533 BRCA1 C Terminus (BRCT) domain EBQ11_05305 PF03120 NAD-dependent DNA ligase OB-fold domain EBQ11_05310 PF02586 SOS response associated peptidase (SRAP) EBQ11_05315 PF07730 Histidine kinase EBQ11_05315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBQ11_05320 PF00072 Response regulator receiver domain EBQ11_05320 PF00196 Bacterial regulatory proteins, luxR family EBQ11_05325 PF12704 MacB-like periplasmic core domain EBQ11_05325 PF00005 ABC transporter EBQ11_05325 PF02687 FtsX-like permease family EBQ11_05335 PF02467 Transcription factor WhiB EBQ11_05340 PF07568 Histidine kinase EBQ11_05340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBQ11_05340 PF12282 Signal transduction histidine kinase EBQ11_05350 PF00303 Thymidylate synthase EBQ11_05355 PF00186 Dihydrofolate reductase EBQ11_05375 PF00890 FAD binding domain EBQ11_05375 PF02910 Fumarate reductase flavoprotein C-term EBQ11_05385 PF01699 Sodium/calcium exchanger protein EBQ11_05395 PF00005 ABC transporter EBQ11_05400 PF00392 Bacterial regulatory proteins, gntR family EBQ11_05400 PF00155 Aminotransferase class I and II EBQ11_05420 PF08305 NPCBM/NEW2 domain EBQ11_05420 PF17974 Galactose-binding domain-like EBQ11_05420 PF17451 Glycosyl hydrolase 101 beta sandwich domain EBQ11_05420 PF18080 Galactose mutarotase-like fold domain EBQ11_05420 PF12905 Endo-alpha-N-acetylgalactosaminidase EBQ11_05420 PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase EBQ11_05425 PF03699 Uncharacterised protein family (UPF0182) EBQ11_05435 PF05362 Lon protease (S16) C-terminal proteolytic domain EBQ11_05435 PF13180 PDZ domain EBQ11_05450 PF00570 HRDC domain EBQ11_05450 PF00580 UvrD/REP helicase N-terminal domain EBQ11_05450 PF13361 UvrD-like helicase C-terminal domain EBQ11_05455 PF09297 NADH pyrophosphatase zinc ribbon domain EBQ11_05455 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain EBQ11_05455 PF00293 NUDIX domain EBQ11_05460 PF00128 Alpha amylase, catalytic domain EBQ11_05460 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) EBQ11_05465 PF00579 tRNA synthetases class I (W and Y) EBQ11_05470 PF00343 Carbohydrate phosphorylase EBQ11_05475 PF07885 Ion channel EBQ11_05490 PF00005 ABC transporter EBQ11_05500 PF00128 Alpha amylase, catalytic domain EBQ11_05500 PF11896 Domain of unknown function (DUF3416) EBQ11_05505 PF16657 Maltogenic Amylase, C-terminal domain EBQ11_05505 PF00128 Alpha amylase, catalytic domain EBQ11_05510 PF18085 Maltokinase N-terminal cap domain EBQ11_05510 PF01636 Phosphotransferase enzyme family EBQ11_05515 PF00128 Alpha amylase, catalytic domain EBQ11_05515 PF02806 Alpha amylase, C-terminal all-beta domain EBQ11_05515 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) EBQ11_05530 PF00528 Binding-protein-dependent transport system inner membrane component EBQ11_05535 PF14785 Maltose transport system permease protein MalF P2 domain EBQ11_05535 PF00528 Binding-protein-dependent transport system inner membrane component EBQ11_05545 PF00356 Bacterial regulatory proteins, lacI family EBQ11_05550 PF00128 Alpha amylase, catalytic domain EBQ11_05550 PF16657 Maltogenic Amylase, C-terminal domain EBQ11_05590 PF01939 Endonuclease NucS EBQ11_05605 PF02874 ATP synthase alpha/beta family, beta-barrel domain EBQ11_05605 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EBQ11_05610 PF00231 ATP synthase EBQ11_05615 PF00306 ATP synthase alpha/beta chain, C terminal domain EBQ11_05615 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EBQ11_05615 PF02874 ATP synthase alpha/beta family, beta-barrel domain EBQ11_05620 PF00213 ATP synthase delta (OSCP) subunit EBQ11_05625 PF00430 ATP synthase B/B' CF(0) EBQ11_05630 PF00137 ATP synthase subunit C EBQ11_05635 PF00119 ATP synthase A chain EBQ11_05645 PF00953 Glycosyl transferase family 4 EBQ11_05650 PF01300 Telomere recombination EBQ11_05655 PF17827 PrmC N-terminal domain EBQ11_05660 PF03462 PCRF domain EBQ11_05660 PF00472 RF-1 domain EBQ11_05665 PF01197 Ribosomal protein L31 EBQ11_05670 PF07498 Rho termination factor, N-terminal domain EBQ11_05670 PF07497 Rho termination factor, RNA-binding domain EBQ11_05670 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EBQ11_05675 PF00288 GHMP kinases N terminal domain EBQ11_05680 PF00291 Pyridoxal-phosphate dependent enzyme EBQ11_05685 PF03447 Homoserine dehydrogenase, NAD binding domain EBQ11_05685 PF01842 ACT domain EBQ11_05685 PF00742 Homoserine dehydrogenase EBQ11_05690 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain EBQ11_05690 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain EBQ11_05695 PF00750 tRNA synthetases class I (R) EBQ11_05695 PF05746 DALR anticodon binding domain EBQ11_05695 PF03485 Arginyl tRNA synthetase N terminal domain EBQ11_05720 PF00005 ABC transporter EBQ11_05735 PF03009 Glycerophosphoryl diester phosphodiesterase family EBQ11_05740 PF01551 Peptidase family M23 EBQ11_05745 PF00571 CBS domain EBQ11_05745 PF01595 Cyclin M transmembrane N-terminal domain EBQ11_05750 PF00571 CBS domain EBQ11_05750 PF03471 Transporter associated domain EBQ11_05750 PF01595 Cyclin M transmembrane N-terminal domain EBQ11_05755 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) EBQ11_05755 PF02779 Transketolase, pyrimidine binding domain EBQ11_05755 PF16078 2-oxoglutarate dehydrogenase N-terminus EBQ11_05755 PF16870 2-oxoglutarate dehydrogenase C-terminal EBQ11_05755 PF00676 Dehydrogenase E1 component EBQ11_05765 PF08239 Bacterial SH3 domain EBQ11_05765 PF00877 NlpC/P60 family EBQ11_05765 PF01476 LysM domain EBQ11_05780 PF08281 Sigma-70, region 4 EBQ11_05780 PF04542 Sigma-70 region 2 EBQ11_05785 PF01979 Amidohydrolase family EBQ11_05790 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase EBQ11_05795 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase EBQ11_05800 PF00480 ROK family EBQ11_05805 PF00701 Dihydrodipicolinate synthetase family EBQ11_05810 PF00005 ABC transporter EBQ11_05810 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EBQ11_05815 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EBQ11_05815 PF00005 ABC transporter EBQ11_05820 PF00528 Binding-protein-dependent transport system inner membrane component EBQ11_05825 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EBQ11_05835 PF07859 alpha/beta hydrolase fold EBQ11_05860 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) EBQ11_05865 PF03193 RsgA GTPase EBQ11_05870 PF00459 Inositol monophosphatase family EBQ11_05875 PF12320 Type 5 capsule protein repressor C-terminal domain EBQ11_05875 PF00149 Calcineurin-like phosphoesterase EBQ11_05880 PF13476 AAA domain EBQ11_05920 PF07516 SecA Wing and Scaffold domain EBQ11_05920 PF01043 SecA preprotein cross-linking domain EBQ11_05920 PF07517 SecA DEAD-like domain EBQ11_05925 PF00348 Polyprenyl synthetase EBQ11_05930 PF00361 Proton-conducting membrane transporter EBQ11_05935 PF00361 Proton-conducting membrane transporter EBQ11_05940 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus EBQ11_05940 PF00361 Proton-conducting membrane transporter EBQ11_05945 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L EBQ11_05950 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 EBQ11_05955 PF12838 4Fe-4S dicluster domain EBQ11_05960 PF00146 NADH dehydrogenase EBQ11_05965 PF04879 Molybdopterin oxidoreductase Fe4S4 domain EBQ11_05965 PF00384 Molybdopterin oxidoreductase EBQ11_05965 PF01568 Molydopterin dinucleotide binding domain EBQ11_05965 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region EBQ11_05970 PF10531 SLBB domain EBQ11_05970 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit EBQ11_05970 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region EBQ11_05980 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit EBQ11_05985 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit EBQ11_05990 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit EBQ11_05995 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 EBQ11_06000 PF01494 FAD binding domain EBQ11_06005 PF01209 ubiE/COQ5 methyltransferase family EBQ11_06010 PF00425 chorismate binding enzyme EBQ11_06015 PF13180 PDZ domain EBQ11_06020 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain EBQ11_06020 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain EBQ11_06025 PF13378 Enolase C-terminal domain-like EBQ11_06025 PF18374 Enolase N-terminal domain-like EBQ11_06030 PF00378 Enoyl-CoA hydratase/isomerase EBQ11_06040 PF00528 Binding-protein-dependent transport system inner membrane component EBQ11_06045 PF00528 Binding-protein-dependent transport system inner membrane component EBQ11_06055 PF13193 AMP-binding enzyme C-terminal domain EBQ11_06055 PF00501 AMP-binding enzyme EBQ11_06060 PF01040 UbiA prenyltransferase family EBQ11_06070 PF00300 Histidine phosphatase superfamily (branch 1) EBQ11_06075 PF01047 MarR family EBQ11_06085 PF12728 Helix-turn-helix domain EBQ11_06090 PF02386 Cation transport protein EBQ11_06095 PF02254 TrkA-N domain EBQ11_06095 PF02080 TrkA-C domain EBQ11_06100 PF18073 Rubredoxin metal binding domain EBQ11_06100 PF06745 KaiC EBQ11_06110 PF00633 Helix-hairpin-helix motif EBQ11_06110 PF00730 HhH-GPD superfamily base excision DNA repair protein EBQ11_06110 PF10576 Iron-sulfur binding domain of endonuclease III EBQ11_06125 PF01266 FAD dependent oxidoreductase EBQ11_06125 PF04324 BFD-like [2Fe-2S] binding domain EBQ11_06130 PF00890 FAD binding domain EBQ11_06135 PF02754 Cysteine-rich domain EBQ11_06135 PF13183 4Fe-4S dicluster domain EBQ11_06140 PF08450 SMP-30/Gluconolactonase/LRE-like region EBQ11_06150 PF00230 Major intrinsic protein EBQ11_06155 PF02782 FGGY family of carbohydrate kinases, C-terminal domain EBQ11_06155 PF00370 FGGY family of carbohydrate kinases, N-terminal domain EBQ11_06160 PF03176 MMPL family EBQ11_06165 PF01336 OB-fold nucleic acid binding domain EBQ11_06165 PF00152 tRNA synthetases class II (D, K and N) EBQ11_06175 PF02261 Aspartate decarboxylase EBQ11_06180 PF02569 Pantoate-beta-alanine ligase EBQ11_06190 PF02733 Dak1 domain EBQ11_06195 PF02734 DAK2 domain EBQ11_06200 PF00391 PEP-utilising enzyme, mobile domain EBQ11_06200 PF02896 PEP-utilising enzyme, TIM barrel domain EBQ11_06200 PF00381 PTS HPr component phosphorylation site EBQ11_06200 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EBQ11_06200 PF05524 PEP-utilising enzyme, N-terminal EBQ11_06210 PF02836 Glycosyl hydrolases family 2, TIM barrel domain EBQ11_06210 PF00703 Glycosyl hydrolases family 2 EBQ11_06210 PF02837 Glycosyl hydrolases family 2, sugar binding domain EBQ11_06210 PF16353 Domain of unknown function(DUF4981) EBQ11_06210 PF02929 Beta galactosidase small chain EBQ11_06215 PF00528 Binding-protein-dependent transport system inner membrane component EBQ11_06220 PF00528 Binding-protein-dependent transport system inner membrane component EBQ11_06225 PF13416 Bacterial extracellular solute-binding protein EBQ11_06230 PF00356 Bacterial regulatory proteins, lacI family EBQ11_06250 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) EBQ11_06255 PF00809 Pterin binding enzyme EBQ11_06260 PF01227 GTP cyclohydrolase I EBQ11_06265 PF01434 Peptidase family M41 EBQ11_06265 PF00004 ATPase family associated with various cellular activities (AAA) EBQ11_06265 PF17862 AAA+ lid domain EBQ11_06275 PF09179 TilS substrate binding domain EBQ11_06275 PF01171 PP-loop family EBQ11_06285 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family EBQ11_06290 PF00719 Inorganic pyrophosphatase EBQ11_06295 PF00877 NlpC/P60 family EBQ11_06300 PF00561 alpha/beta hydrolase fold EBQ11_06305 PF12146 Serine aminopeptidase, S33 EBQ11_06315 PF13183 4Fe-4S dicluster domain EBQ11_06315 PF01565 FAD binding domain EBQ11_06315 PF02913 FAD linked oxidases, C-terminal domain EBQ11_06320 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain EBQ11_06320 PF00391 PEP-utilising enzyme, mobile domain EBQ11_06320 PF02896 PEP-utilising enzyme, TIM barrel domain EBQ11_06335 PF00528 Binding-protein-dependent transport system inner membrane component EBQ11_06340 PF00528 Binding-protein-dependent transport system inner membrane component EBQ11_06345 PF00128 Alpha amylase, catalytic domain EBQ11_06350 PF01381 Helix-turn-helix EBQ11_06360 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH EBQ11_06375 PF01867 CRISPR associated protein Cas1 EBQ11_06405 PF18395 Cas3 C-terminal domain EBQ11_06405 PF00270 DEAD/DEAH box helicase EBQ11_06405 PF18019 HD domain EBQ11_06440 PF00392 Bacterial regulatory proteins, gntR family EBQ11_06455 PF00005 ABC transporter EBQ11_06460 PF02361 Cobalt transport protein EBQ11_06465 PF03747 ADP-ribosylglycohydrolase EBQ11_06485 PF00155 Aminotransferase class I and II EBQ11_06495 PF09370 Phosphoenolpyruvate hydrolase-like EBQ11_06500 PF02308 MgtC family EBQ11_06505 PF00083 Sugar (and other) transporter EBQ11_06510 PF00356 Bacterial regulatory proteins, lacI family EBQ11_06525 PF00149 Calcineurin-like phosphoesterase EBQ11_06525 PF02872 5'-nucleotidase, C-terminal domain EBQ11_06545 PF00005 ABC transporter EBQ11_06550 PF13847 Methyltransferase domain EBQ11_06555 PF00356 Bacterial regulatory proteins, lacI family EBQ11_06560 PF00005 ABC transporter EBQ11_06565 PF02653 Branched-chain amino acid transport system / permease component EBQ11_06570 PF13407 Periplasmic binding protein domain EBQ11_06575 PF00294 pfkB family carbohydrate kinase EBQ11_06585 PF01695 IstB-like ATP binding protein EBQ11_06595 PF05025 RbsD / FucU transport protein family EBQ11_06600 PF16355 Domain of unknown function (DUF4982) EBQ11_06600 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 EBQ11_06600 PF00703 Glycosyl hydrolases family 2 EBQ11_06600 PF02836 Glycosyl hydrolases family 2, TIM barrel domain EBQ11_06600 PF02837 Glycosyl hydrolases family 2, sugar binding domain EBQ11_06605 PF02838 Glycosyl hydrolase family 20, domain 2 EBQ11_06605 PF00728 Glycosyl hydrolase family 20, catalytic domain EBQ11_06605 PF07691 PA14 domain EBQ11_06615 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain EBQ11_06615 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase EBQ11_06625 PF02447 GntP family permease EBQ11_06630 PF00356 Bacterial regulatory proteins, lacI family EBQ11_06640 PF02837 Glycosyl hydrolases family 2, sugar binding domain EBQ11_06640 PF02929 Beta galactosidase small chain EBQ11_06640 PF16353 Domain of unknown function(DUF4981) EBQ11_06640 PF00703 Glycosyl hydrolases family 2 EBQ11_06640 PF02836 Glycosyl hydrolases family 2, TIM barrel domain EBQ11_06655 PF00528 Binding-protein-dependent transport system inner membrane component EBQ11_06660 PF00528 Binding-protein-dependent transport system inner membrane component EBQ11_06670 PF00356 Bacterial regulatory proteins, lacI family EBQ11_06680 PF00528 Binding-protein-dependent transport system inner membrane component EBQ11_06685 PF00528 Binding-protein-dependent transport system inner membrane component EBQ11_06690 PF02836 Glycosyl hydrolases family 2, TIM barrel domain EBQ11_06690 PF16353 Domain of unknown function(DUF4981) EBQ11_06690 PF02929 Beta galactosidase small chain EBQ11_06690 PF02837 Glycosyl hydrolases family 2, sugar binding domain EBQ11_06690 PF00703 Glycosyl hydrolases family 2 EBQ11_06700 PF03553 Na+/H+ antiporter family EBQ11_06705 PF00155 Aminotransferase class I and II EBQ11_06710 PF02653 Branched-chain amino acid transport system / permease component EBQ11_06715 PF00005 ABC transporter EBQ11_06720 PF13407 Periplasmic binding protein domain EBQ11_06725 PF00370 FGGY family of carbohydrate kinases, N-terminal domain EBQ11_06725 PF02782 FGGY family of carbohydrate kinases, C-terminal domain EBQ11_06730 PF01261 Xylose isomerase-like TIM barrel EBQ11_06755 PF01116 Fructose-bisphosphate aldolase class-II EBQ11_06760 PF00528 Binding-protein-dependent transport system inner membrane component EBQ11_06765 PF00528 Binding-protein-dependent transport system inner membrane component EBQ11_06775 PF08220 DeoR-like helix-turn-helix domain EBQ11_06775 PF00455 DeoR C terminal sensor domain EBQ11_06780 PF01047 MarR family EBQ11_06780 PF00480 ROK family EBQ11_06785 PF13802 Galactose mutarotase-like EBQ11_06785 PF01055 Glycosyl hydrolases family 31 EBQ11_06800 PF00528 Binding-protein-dependent transport system inner membrane component EBQ11_06810 PF00884 Sulfatase EBQ11_06815 PF00356 Bacterial regulatory proteins, lacI family EBQ11_06820 PF00083 Sugar (and other) transporter EBQ11_06825 PF13186 Iron-sulfur cluster-binding domain EBQ11_06825 PF04055 Radical SAM superfamily EBQ11_06830 PF01925 Sulfite exporter TauE/SafE EBQ11_06835 PF02502 Ribose/Galactose Isomerase EBQ11_06840 PF00107 Zinc-binding dehydrogenase EBQ11_06840 PF08240 Alcohol dehydrogenase GroES-like domain EBQ11_06845 PF02733 Dak1 domain EBQ11_06845 PF02734 DAK2 domain EBQ11_06850 PF02782 FGGY family of carbohydrate kinases, C-terminal domain EBQ11_06850 PF00370 FGGY family of carbohydrate kinases, N-terminal domain EBQ11_06855 PF00596 Class II Aldolase and Adducin N-terminal domain EBQ11_06860 PF00370 FGGY family of carbohydrate kinases, N-terminal domain EBQ11_06860 PF02782 FGGY family of carbohydrate kinases, C-terminal domain EBQ11_06870 PF08220 DeoR-like helix-turn-helix domain EBQ11_06870 PF05573 NosL EBQ11_06875 PF00370 FGGY family of carbohydrate kinases, N-terminal domain EBQ11_06875 PF02782 FGGY family of carbohydrate kinases, C-terminal domain EBQ11_06890 PF13936 Helix-turn-helix domain EBQ11_06890 PF04198 Putative sugar-binding domain EBQ11_06895 PF07690 Major Facilitator Superfamily EBQ11_06905 PF00294 pfkB family carbohydrate kinase EBQ11_06910 PF17871 AAA lid domain EBQ11_06910 PF02861 Clp amino terminal domain, pathogenicity island component EBQ11_06910 PF07724 AAA domain (Cdc48 subfamily) EBQ11_06910 PF00004 ATPase family associated with various cellular activities (AAA) EBQ11_06910 PF10431 C-terminal, D2-small domain, of ClpB protein EBQ11_06915 PF02580 D-Tyr-tRNA(Tyr) deacylase EBQ11_06925 PF01571 Aminomethyltransferase folate-binding domain EBQ11_06930 PF08768 Domain of unknown function (DUF1794) EBQ11_06940 PF00149 Calcineurin-like phosphoesterase EBQ11_06940 PF02872 5'-nucleotidase, C-terminal domain EBQ11_06950 PF01235 Sodium:alanine symporter family EBQ11_06960 PF01384 Phosphate transporter family EBQ11_06965 PF00005 ABC transporter EBQ11_06970 PF00528 Binding-protein-dependent transport system inner membrane component EBQ11_06975 PF00528 Binding-protein-dependent transport system inner membrane component EBQ11_06980 PF12849 PBP superfamily domain EBQ11_06985 PF00300 Histidine phosphatase superfamily (branch 1) EBQ11_06985 PF00293 NUDIX domain EBQ11_06990 PF02503 Polyphosphate kinase middle domain EBQ11_06990 PF13090 Polyphosphate kinase C-terminal domain 2 EBQ11_06990 PF17941 Polyphosphate kinase C-terminal domain 1 EBQ11_06990 PF13089 Polyphosphate kinase N-terminal domain EBQ11_07000 PF00145 C-5 cytosine-specific DNA methylase EBQ11_07000 PF12728 Helix-turn-helix domain EBQ11_07005 PF09570 SinI restriction endonuclease EBQ11_07050 PF00476 DNA polymerase family A EBQ11_07050 PF01612 3'-5' exonuclease EBQ11_07050 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain EBQ11_07050 PF01367 5'-3' exonuclease, C-terminal SAM fold EBQ11_07095 PF02773 S-adenosylmethionine synthetase, C-terminal domain EBQ11_07095 PF00438 S-adenosylmethionine synthetase, N-terminal domain EBQ11_07095 PF02772 S-adenosylmethionine synthetase, central domain EBQ11_07100 PF01555 DNA methylase EBQ11_07105 PF00145 C-5 cytosine-specific DNA methylase EBQ11_07130 PF03354 Phage Terminase EBQ11_07140 PF04860 Phage portal protein EBQ11_07175 PF04471 Restriction endonuclease EBQ11_07175 PF14338 Mrr N-terminal domain EBQ11_07180 PF01022 Bacterial regulatory protein, arsR family EBQ11_07210 PF13610 DDE domain EBQ11_07220 PF07690 Major Facilitator Superfamily EBQ11_07225 PF00440 Bacterial regulatory proteins, tetR family EBQ11_07225 PF02909 Tetracyclin repressor-like, C-terminal domain EBQ11_07240 PF13610 DDE domain EBQ11_07275 PF05105 Bacteriophage holin family EBQ11_07295 PF02796 Helix-turn-helix domain of resolvase EBQ11_07295 PF00239 Resolvase, N terminal domain EBQ11_07315 PF00398 Ribosomal RNA adenine dimethylase EBQ11_07335 PF01641 SelR domain EBQ11_07360 PF03023 Lipid II flippase MurJ EBQ11_07365 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain EBQ11_07365 PF00056 lactate/malate dehydrogenase, NAD binding domain EBQ11_07380 PF13519 von Willebrand factor type A domain EBQ11_07385 PF05738 Cna protein B-type domain EBQ11_07385 PF05737 Collagen binding domain EBQ11_07385 PF17802 Prealbumin-like fold domain EBQ11_07395 PF02028 BCCT, betaine/carnitine/choline family transporter EBQ11_07425 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase EBQ11_07425 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain EBQ11_07430 PF01259 SAICAR synthetase EBQ11_07435 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain EBQ11_07435 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain EBQ11_07440 PF00709 Adenylosuccinate synthetase EBQ11_07450 PF01116 Fructose-bisphosphate aldolase class-II EBQ11_07455 PF01384 Phosphate transporter family EBQ11_07465 PF00293 NUDIX domain EBQ11_07500 PF02861 Clp amino terminal domain, pathogenicity island component EBQ11_07500 PF17871 AAA lid domain EBQ11_07500 PF00004 ATPase family associated with various cellular activities (AAA) EBQ11_07500 PF07724 AAA domain (Cdc48 subfamily) EBQ11_07500 PF10431 C-terminal, D2-small domain, of ClpB protein EBQ11_07510 PF00749 tRNA synthetases class I (E and Q), catalytic domain EBQ11_07520 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region EBQ11_07520 PF07676 WD40-like Beta Propeller Repeat EBQ11_07520 PF00326 Prolyl oligopeptidase family EBQ11_07525 PF03009 Glycerophosphoryl diester phosphodiesterase family EBQ11_07540 PF00293 NUDIX domain EBQ11_07550 PF00226 DnaJ domain EBQ11_07550 PF01556 DnaJ C terminal domain EBQ11_07550 PF00684 DnaJ central domain EBQ11_07555 PF01025 GrpE EBQ11_07560 PF00012 Hsp70 protein EBQ11_07570 PF00156 Phosphoribosyl transferase domain EBQ11_07575 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family EBQ11_07580 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain EBQ11_07580 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain EBQ11_07585 PF00156 Phosphoribosyl transferase domain EBQ11_07595 PF04879 Molybdopterin oxidoreductase Fe4S4 domain EBQ11_07595 PF00384 Molybdopterin oxidoreductase EBQ11_07595 PF01568 Molydopterin dinucleotide binding domain EBQ11_07600 PF12800 4Fe-4S binding domain EBQ11_07600 PF13247 4Fe-4S dicluster domain EBQ11_07610 PF07992 Pyridine nucleotide-disulphide oxidoreductase EBQ11_07610 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EBQ11_07615 PF02583 Metal-sensitive transcriptional repressor EBQ11_07620 PF01568 Molydopterin dinucleotide binding domain EBQ11_07620 PF00384 Molybdopterin oxidoreductase EBQ11_07620 PF04879 Molybdopterin oxidoreductase Fe4S4 domain EBQ11_07635 PF00326 Prolyl oligopeptidase family EBQ11_07635 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain EBQ11_07645 PF03649 Uncharacterised protein family (UPF0014) EBQ11_07650 PF00480 ROK family EBQ11_07675 PF07883 Cupin domain EBQ11_07680 PF07690 Major Facilitator Superfamily EBQ11_07695 PF00005 ABC transporter EBQ11_07695 PF08402 TOBE domain EBQ11_07700 PF00528 Binding-protein-dependent transport system inner membrane component EBQ11_07740 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus EBQ11_07740 PF00361 Proton-conducting membrane transporter EBQ11_07740 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter EBQ11_07740 PF13244 Domain of unknown function (DUF4040) EBQ11_07745 PF06559 2'-deoxycytidine 5'-triphosphate deaminase (DCD) EBQ11_07790 PF13276 HTH-like domain EBQ11_07790 PF13683 Integrase core domain EBQ11_07815 PF00561 alpha/beta hydrolase fold EBQ11_07820 PF12169 DNA polymerase III subunits gamma and tau domain III EBQ11_07825 PF02223 Thymidylate kinase EBQ11_07830 PF01751 Toprim domain EBQ11_07830 PF13368 Topoisomerase C-terminal repeat EBQ11_07830 PF01131 DNA topoisomerase EBQ11_07835 PF02390 Putative methyltransferase EBQ11_07835 PF05175 Methyltransferase small domain EBQ11_07835 PF17827 PrmC N-terminal domain EBQ11_07845 PF13443 Cro/C1-type HTH DNA-binding domain EBQ11_07850 PF00270 DEAD/DEAH box helicase EBQ11_07850 PF00271 Helicase conserved C-terminal domain EBQ11_07880 PF00437 Type II/IV secretion system protein EBQ11_07895 PF00561 alpha/beta hydrolase fold EBQ11_07900 PF10576 Iron-sulfur binding domain of endonuclease III EBQ11_07900 PF00633 Helix-hairpin-helix motif EBQ11_07900 PF00730 HhH-GPD superfamily base excision DNA repair protein EBQ11_07905 PF13545 Crp-like helix-turn-helix domain EBQ11_07905 PF00027 Cyclic nucleotide-binding domain EBQ11_07920 PF02467 Transcription factor WhiB EBQ11_07925 PF00912 Transglycosylase EBQ11_07925 PF00905 Penicillin binding protein transpeptidase domain EBQ11_07940 PF02903 Alpha amylase, N-terminal ig-like domain EBQ11_07940 PF00128 Alpha amylase, catalytic domain EBQ11_07950 PF06463 Molybdenum Cofactor Synthesis C EBQ11_07950 PF04055 Radical SAM superfamily EBQ11_07955 PF02391 MoaE protein EBQ11_07960 PF01967 MoaC family EBQ11_07965 PF00994 Probable molybdopterin binding domain EBQ11_07965 PF03454 MoeA C-terminal region (domain IV) EBQ11_07965 PF03453 MoeA N-terminal region (domain I and II) EBQ11_07970 PF00994 Probable molybdopterin binding domain EBQ11_07980 PF00528 Binding-protein-dependent transport system inner membrane component EBQ11_08010 PF00899 ThiF family EBQ11_08010 PF00581 Rhodanese-like domain EBQ11_08025 PF08903 Domain of unknown function (DUF1846) EBQ11_08030 PF05525 Branched-chain amino acid transport protein EBQ11_08040 PF14437 MafB19-like deaminase EBQ11_08070 PF00800 Prephenate dehydratase EBQ11_08080 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EBQ11_08080 PF02403 Seryl-tRNA synthetase N-terminal domain EBQ11_08110 PF02056 Family 4 glycosyl hydrolase EBQ11_08110 PF11975 Family 4 glycosyl hydrolase C-terminal domain EBQ11_08115 PF00294 pfkB family carbohydrate kinase EBQ11_08120 PF13407 Periplasmic binding protein domain EBQ11_08125 PF02653 Branched-chain amino acid transport system / permease component EBQ11_08130 PF00005 ABC transporter EBQ11_08155 PF08544 GHMP kinases C terminal EBQ11_08155 PF10509 Galactokinase galactose-binding signature EBQ11_08155 PF00288 GHMP kinases N terminal domain EBQ11_08160 PF12161 HsdM N-terminal domain EBQ11_08160 PF02384 N-6 DNA Methylase EBQ11_08170 PF02384 N-6 DNA Methylase EBQ11_08170 PF12161 HsdM N-terminal domain EBQ11_08230 PF02384 N-6 DNA Methylase EBQ11_08230 PF12161 HsdM N-terminal domain EBQ11_08235 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin EBQ11_08240 PF01850 PIN domain EBQ11_08245 PF01420 Type I restriction modification DNA specificity domain EBQ11_08265 PF12008 Type I restriction and modification enzyme - subunit R C terminal EBQ11_08265 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) EBQ11_08265 PF18766 SWI2/SNF2 ATPase EBQ11_08305 PF00356 Bacterial regulatory proteins, lacI family EBQ11_08310 PF00005 ABC transporter EBQ11_08310 PF00664 ABC transporter transmembrane region EBQ11_08315 PF00664 ABC transporter transmembrane region EBQ11_08315 PF00005 ABC transporter EBQ11_08330 PF01032 FecCD transport family EBQ11_08340 PF00005 ABC transporter EBQ11_08350 PF13649 Methyltransferase domain EBQ11_08355 PF00294 pfkB family carbohydrate kinase EBQ11_08360 PF01081 KDPG and KHG aldolase EBQ11_08365 PF03786 D-mannonate dehydratase (UxuA) EBQ11_08370 PF08125 Mannitol dehydrogenase C-terminal domain EBQ11_08370 PF01232 Mannitol dehydrogenase Rossmann domain EBQ11_08375 PF09339 IclR helix-turn-helix domain EBQ11_08375 PF01614 Bacterial transcriptional regulator EBQ11_08380 PF00005 ABC transporter EBQ11_08390 PF01757 Acyltransferase family EBQ11_08400 PF03477 ATP cone domain EBQ11_08400 PF13597 Anaerobic ribonucleoside-triphosphate reductase EBQ11_08405 PF01263 Aldose 1-epimerase EBQ11_08410 PF00072 Response regulator receiver domain EBQ11_08410 PF00196 Bacterial regulatory proteins, luxR family EBQ11_08420 PF00005 ABC transporter EBQ11_08430 PF00005 ABC transporter EBQ11_08440 PF07730 Histidine kinase EBQ11_08445 PF00072 Response regulator receiver domain EBQ11_08445 PF00196 Bacterial regulatory proteins, luxR family EBQ11_08450 PF11898 Domain of unknown function (DUF3418) EBQ11_08450 PF00270 DEAD/DEAH box helicase EBQ11_08450 PF00271 Helicase conserved C-terminal domain EBQ11_08450 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold EBQ11_08450 PF04408 Helicase associated domain (HA2) EBQ11_08480 PF00528 Binding-protein-dependent transport system inner membrane component EBQ11_08485 PF00528 Binding-protein-dependent transport system inner membrane component EBQ11_08500 PF01451 Low molecular weight phosphotyrosine protein phosphatase EBQ11_08505 PF00268 Ribonucleotide reductase, small chain EBQ11_08515 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain EBQ11_08515 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain EBQ11_08520 PF00317 Ribonucleotide reductase, all-alpha domain EBQ11_08520 PF02867 Ribonucleotide reductase, barrel domain EBQ11_08520 PF08343 Ribonucleotide reductase N-terminal EBQ11_08525 PF07972 NrdI Flavodoxin like EBQ11_08535 PF01475 Ferric uptake regulator family EBQ11_08540 PF02664 S-Ribosylhomocysteinase (LuxS) EBQ11_08545 PF01048 Phosphorylase superfamily EBQ11_08550 PF01661 Macro domain EBQ11_08555 PF00075 RNase H EBQ11_08565 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain EBQ11_08565 PF00326 Prolyl oligopeptidase family EBQ11_08575 PF00005 ABC transporter EBQ11_08575 PF01061 ABC-2 type transporter EBQ11_08575 PF00498 FHA domain EBQ11_08580 PF16697 Inner membrane component of T3SS, cytoplasmic domain EBQ11_08590 PF01098 Cell cycle protein EBQ11_08595 PF00905 Penicillin binding protein transpeptidase domain EBQ11_08600 PF03793 PASTA domain EBQ11_08600 PF00069 Protein kinase domain EBQ11_08605 PF04203 Sortase domain EBQ11_08610 PF06781 Cell division protein CrgA EBQ11_08615 PF01694 Rhomboid family EBQ11_08620 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD EBQ11_08650 PF12089 Transmembrane domain of unknown function (DUF3566) EBQ11_08655 PF03989 DNA gyrase C-terminal domain, beta-propeller EBQ11_08655 PF00521 DNA gyrase/topoisomerase IV, subunit A EBQ11_08660 PF00986 DNA gyrase B subunit, carboxyl terminus EBQ11_08660 PF00204 DNA gyrase B EBQ11_08660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBQ11_08660 PF01751 Toprim domain EBQ11_08670 PF02463 RecF/RecN/SMC N terminal domain EBQ11_08675 PF02768 DNA polymerase III beta subunit, C-terminal domain EBQ11_08675 PF02767 DNA polymerase III beta subunit, central domain EBQ11_08675 PF00712 DNA polymerase III beta subunit, N-terminal domain EBQ11_08680 PF08299 Bacterial dnaA protein helix-turn-helix EBQ11_08680 PF00308 Bacterial dnaA protein EBQ11_08685 PF00468 Ribosomal protein L34 EBQ11_08690 PF00825 Ribonuclease P EBQ11_08695 PF01809 Putative membrane protein insertion efficiency factor EBQ11_08700 PF02096 60Kd inner membrane protein EBQ11_08710 PF02527 rRNA small subunit methyltransferase G EBQ11_08715 PF13614 AAA domain EBQ11_08720 PF17762 HTH domain found in ParB protein EBQ11_08720 PF02195 ParB-like nuclease domain EBQ11_08725 PF07478 D-ala D-ala ligase C-terminus EBQ11_08725 PF01820 D-ala D-ala ligase N-terminus EBQ11_08730 PF00155 Aminotransferase class I and II EBQ11_08750 PF00293 NUDIX domain EBQ11_08755 PF13735 tRNA nucleotidyltransferase domain 2 putative EBQ11_08755 PF12627 Probable RNA and SrmB- binding site of polymerase A EBQ11_08755 PF01743 Poly A polymerase head domain EBQ11_08760 PF07690 Major Facilitator Superfamily EBQ11_08765 PF01594 AI-2E family transporter EBQ11_08770 PF00905 Penicillin binding protein transpeptidase domain EBQ11_08770 PF00912 Transglycosylase EBQ11_08775 PF01250 Ribosomal protein S6 EBQ11_08780 PF00436 Single-strand binding protein family EBQ11_08785 PF01084 Ribosomal protein S18 EBQ11_08790 PF03948 Ribosomal protein L9, C-terminal domain EBQ11_08790 PF01281 Ribosomal protein L9, N-terminal domain EBQ11_08795 PF02872 5'-nucleotidase, C-terminal domain EBQ11_08795 PF00149 Calcineurin-like phosphoesterase EBQ11_08810 PF03796 DnaB-like helicase C terminal domain EBQ11_08810 PF00772 DnaB-like helicase N terminal domain EBQ11_08815 PF07690 Major Facilitator Superfamily EBQ11_08825 PF00899 ThiF family EBQ11_08840 PF08543 Phosphomethylpyrimidine kinase EBQ11_08845 PF00248 Aldo/keto reductase family EBQ11_08850 PF00561 alpha/beta hydrolase fold EBQ11_08865 PF00585 C-terminal regulatory domain of Threonine dehydratase EBQ11_08865 PF00291 Pyridoxal-phosphate dependent enzyme EBQ11_08885 PF01712 Deoxynucleoside kinase EBQ11_08895 PF01702 Queuine tRNA-ribosyltransferase EBQ11_08900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBQ11_08900 PF00512 His Kinase A (phospho-acceptor) domain EBQ11_08900 PF00672 HAMP domain EBQ11_08905 PF00072 Response regulator receiver domain EBQ11_08905 PF00486 Transcriptional regulatory protein, C terminal EBQ11_08920 PF00005 ABC transporter EBQ11_08925 PF12704 MacB-like periplasmic core domain EBQ11_08925 PF02687 FtsX-like permease family EBQ11_08955 PF02386 Cation transport protein EBQ11_08970 PF08482 ATP-dependent helicase C-terminal EBQ11_08970 PF00271 Helicase conserved C-terminal domain EBQ11_08970 PF04408 Helicase associated domain (HA2) EBQ11_08970 PF00270 DEAD/DEAH box helicase EBQ11_08985 PF05958 tRNA (Uracil-5-)-methyltransferase EBQ11_09015 PF01661 Macro domain EBQ11_09020 PF07992 Pyridine nucleotide-disulphide oxidoreductase EBQ11_09045 PF01791 DeoC/LacD family aldolase EBQ11_09055 PF02782 FGGY family of carbohydrate kinases, C-terminal domain EBQ11_09055 PF00370 FGGY family of carbohydrate kinases, N-terminal domain EBQ11_09060 PF04198 Putative sugar-binding domain EBQ11_09065 PF13407 Periplasmic binding protein domain EBQ11_09070 PF02653 Branched-chain amino acid transport system / permease component EBQ11_09075 PF02653 Branched-chain amino acid transport system / permease component EBQ11_09080 PF00005 ABC transporter EBQ11_09085 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EBQ11_09085 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EBQ11_09090 PF01113 Dihydrodipicolinate reductase, N-terminus EBQ11_09090 PF16654 Diaminopimelic acid dehydrogenase C-terminal domain EBQ11_09110 PF00939 Sodium:sulfate symporter transmembrane region EBQ11_09125 PF02361 Cobalt transport protein EBQ11_09130 PF00005 ABC transporter EBQ11_09135 PF00005 ABC transporter EBQ11_09135 PF04954 Siderophore-interacting protein EBQ11_09135 PF00664 ABC transporter transmembrane region EBQ11_09135 PF08021 Siderophore-interacting FAD-binding domain EBQ11_09140 PF00005 ABC transporter EBQ11_09160 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain EBQ11_09160 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain EBQ11_09165 PF01636 Phosphotransferase enzyme family EBQ11_09170 PF17385 Lacto-N-biose phosphorylase central domain EBQ11_09170 PF09508 Lacto-N-biose phosphorylase N-terminal TIM barrel domain EBQ11_09170 PF17386 Lacto-N-biose phosphorylase C-terminal domain EBQ11_09175 PF00528 Binding-protein-dependent transport system inner membrane component EBQ11_09180 PF00528 Binding-protein-dependent transport system inner membrane component EBQ11_09190 PF00480 ROK family EBQ11_09195 PF00480 ROK family EBQ11_09200 PF00005 ABC transporter EBQ11_09200 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EBQ11_09205 PF12911 N-terminal TM domain of oligopeptide transport permease C EBQ11_09205 PF00528 Binding-protein-dependent transport system inner membrane component EBQ11_09210 PF00528 Binding-protein-dependent transport system inner membrane component EBQ11_09220 PF00480 ROK family EBQ11_09235 PF03932 CutC family EBQ11_09250 PF02614 Glucuronate isomerase EBQ11_09255 PF03480 Bacterial extracellular solute-binding protein, family 7 EBQ11_09260 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component EBQ11_09260 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component EBQ11_09265 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component EBQ11_09270 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase EBQ11_09270 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain EBQ11_09275 PF01497 Periplasmic binding protein EBQ11_09280 PF01032 FecCD transport family EBQ11_09285 PF01032 FecCD transport family EBQ11_09290 PF00005 ABC transporter EBQ11_09295 PF00171 Aldehyde dehydrogenase family EBQ11_09300 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain EBQ11_09300 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain EBQ11_09300 PF00205 Thiamine pyrophosphate enzyme, central domain EBQ11_09305 PF04962 KduI/IolB family EBQ11_09315 PF00294 pfkB family carbohydrate kinase EBQ11_09325 PF00923 Transaldolase/Fructose-6-phosphate aldolase EBQ11_09330 PF02894 Oxidoreductase family, C-terminal alpha/beta domain EBQ11_09330 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EBQ11_09335 PF01261 Xylose isomerase-like TIM barrel EBQ11_09340 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EBQ11_09340 PF02894 Oxidoreductase family, C-terminal alpha/beta domain EBQ11_09345 PF00005 ABC transporter EBQ11_09350 PF02653 Branched-chain amino acid transport system / permease component EBQ11_09355 PF13407 Periplasmic binding protein domain EBQ11_09360 PF00459 Inositol monophosphatase family EBQ11_09365 PF07690 Major Facilitator Superfamily EBQ11_09370 PF00356 Bacterial regulatory proteins, lacI family EBQ11_09375 PF08240 Alcohol dehydrogenase GroES-like domain EBQ11_09375 PF00107 Zinc-binding dehydrogenase EBQ11_09395 PF00005 ABC transporter EBQ11_09400 PF00005 ABC transporter EBQ11_09400 PF00664 ABC transporter transmembrane region EBQ11_09405 PF00005 ABC transporter EBQ11_09405 PF00664 ABC transporter transmembrane region EBQ11_09410 PF00440 Bacterial regulatory proteins, tetR family EBQ11_09410 PF17932 Tetracyclin repressor-like, C-terminal domain EBQ11_09415 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III EBQ11_09415 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain EBQ11_09415 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II EBQ11_09415 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I EBQ11_09420 PF00754 F5/8 type C domain EBQ11_09420 PF13088 BNR repeat-like domain EBQ11_09420 PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase EBQ11_09430 PF00403 Heavy-metal-associated domain EBQ11_09435 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EBQ11_09435 PF00403 Heavy-metal-associated domain EBQ11_09435 PF07992 Pyridine nucleotide-disulphide oxidoreductase EBQ11_09445 PF09335 SNARE associated Golgi protein EBQ11_09450 PF00206 Lyase EBQ11_09450 PF08328 Adenylosuccinate lyase C-terminal EBQ11_09455 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV EBQ11_09460 PF00155 Aminotransferase class I and II EBQ11_09465 PF14256 YwiC-like protein EBQ11_09475 PF01487 Type I 3-dehydroquinase EBQ11_09485 PF00248 Aldo/keto reductase family EBQ11_09490 PF00762 Ferrochelatase EBQ11_09495 PF01066 CDP-alcohol phosphatidyltransferase EBQ11_09505 PF00884 Sulfatase EBQ11_09510 PF00884 Sulfatase EBQ11_09520 PF00528 Binding-protein-dependent transport system inner membrane component EBQ11_09525 PF00528 Binding-protein-dependent transport system inner membrane component EBQ11_09555 PF01032 FecCD transport family EBQ11_09560 PF00005 ABC transporter EBQ11_09590 PF00746 LPXTG cell wall anchor motif EBQ11_09590 PF16555 Gram-positive pilin subunit D1, N-terminal domain EBQ11_09605 PF00300 Histidine phosphatase superfamily (branch 1) EBQ11_09615 PF01895 PhoU domain EBQ11_09620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBQ11_09620 PF00512 His Kinase A (phospho-acceptor) domain EBQ11_09625 PF00072 Response regulator receiver domain EBQ11_09625 PF00486 Transcriptional regulatory protein, C terminal EBQ11_09630 PF02559 CarD-like/TRCF domain EBQ11_09635 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase EBQ11_09640 PF02542 YgbB family EBQ11_09660 PF03611 PTS system sugar-specific permease component EBQ11_09665 PF00596 Class II Aldolase and Adducin N-terminal domain EBQ11_09675 PF02733 Dak1 domain EBQ11_09685 PF04198 Putative sugar-binding domain EBQ11_09700 PF00005 ABC transporter EBQ11_09710 PF01406 tRNA synthetases class I (C) catalytic domain EBQ11_09710 PF09190 DALR domain EBQ11_09715 PF00588 SpoU rRNA Methylase family EBQ11_09715 PF08032 RNA 2'-O ribose methyltransferase substrate binding EBQ11_09730 PF00860 Permease family EBQ11_09755 PF02554 Carbon starvation protein CstA EBQ11_09755 PF13722 5TM C-terminal transporter carbon starvation CstA EBQ11_09765 PF12169 DNA polymerase III subunits gamma and tau domain III EBQ11_09770 PF02132 RecR protein EBQ11_09770 PF13662 Toprim domain EBQ11_09775 PF01842 ACT domain EBQ11_09775 PF13840 ACT domain EBQ11_09775 PF00696 Amino acid kinase family EBQ11_09780 PF01118 Semialdehyde dehydrogenase, NAD binding domain EBQ11_09780 PF02774 Semialdehyde dehydrogenase, dimerisation domain EBQ11_09795 PF00528 Binding-protein-dependent transport system inner membrane component EBQ11_09800 PF00528 Binding-protein-dependent transport system inner membrane component EBQ11_09805 PF13416 Bacterial extracellular solute-binding protein EBQ11_09815 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EBQ11_09815 PF02894 Oxidoreductase family, C-terminal alpha/beta domain EBQ11_09825 PF17912 MalK OB fold domain EBQ11_09825 PF00005 ABC transporter EBQ11_09830 PF00069 Protein kinase domain EBQ11_09830 PF00400 WD domain, G-beta repeat EBQ11_09850 PF00005 ABC transporter EBQ11_09875 PF03167 Uracil DNA glycosylase superfamily EBQ11_09890 PF00118 TCP-1/cpn60 chaperonin family EBQ11_09905 PF00106 short chain dehydrogenase EBQ11_09910 PF00501 AMP-binding enzyme EBQ11_09910 PF01553 Acyltransferase EBQ11_09915 PF00512 His Kinase A (phospho-acceptor) domain EBQ11_09915 PF00672 HAMP domain EBQ11_09915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBQ11_09920 PF00072 Response regulator receiver domain EBQ11_09920 PF00486 Transcriptional regulatory protein, C terminal EBQ11_09930 PF04012 PspA/IM30 family EBQ11_09940 PF00313 'Cold-shock' DNA-binding domain EBQ11_09945 PF11228 Protein of unknown function (DUF3027) EBQ11_09950 PF01238 Phosphomannose isomerase type I EBQ11_09955 PF00860 Permease family EBQ11_09960 PF00266 Aminotransferase class-V EBQ11_09970 PF02742 Iron dependent repressor, metal binding and dimerisation domain EBQ11_09970 PF18357 Diphteria toxin repressor SH3 domain EBQ11_09970 PF01325 Iron dependent repressor, N-terminal DNA binding domain EBQ11_09975 PF01476 LysM domain EBQ11_09975 PF00877 NlpC/P60 family EBQ11_09980 PF00582 Universal stress protein family EBQ11_10015 PF00994 Probable molybdopterin binding domain EBQ11_10015 PF03454 MoeA C-terminal region (domain IV) EBQ11_10015 PF03453 MoeA N-terminal region (domain I and II) EBQ11_10040 PF01381 Helix-turn-helix EBQ11_10045 PF05973 Phage derived protein Gp49-like (DUF891) EBQ11_10060 PF12697 Alpha/beta hydrolase family EBQ11_10075 PF01497 Periplasmic binding protein EBQ11_10080 PF01032 FecCD transport family EBQ11_10085 PF01032 FecCD transport family EBQ11_10090 PF00005 ABC transporter EBQ11_10095 PF00392 Bacterial regulatory proteins, gntR family EBQ11_10095 PF07702 UTRA domain EBQ11_10100 PF12146 Serine aminopeptidase, S33 EBQ11_10105 PF00083 Sugar (and other) transporter EBQ11_10120 PF00830 Ribosomal L28 family EBQ11_10125 PF00471 Ribosomal protein L33 EBQ11_10130 PF00253 Ribosomal protein S14p/S29e EBQ11_10135 PF01197 Ribosomal protein L31 EBQ11_10140 PF00444 Ribosomal protein L36 EBQ11_10150 PF07690 Major Facilitator Superfamily EBQ11_10160 PF05167 Uncharacterised ACR (DUF711) EBQ11_10165 PF00005 ABC transporter EBQ11_10165 PF00027 Cyclic nucleotide-binding domain EBQ11_10180 PF02378 Phosphotransferase system, EIIC EBQ11_10180 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 EBQ11_10180 PF00367 phosphotransferase system, EIIB EBQ11_10185 PF03123 CAT RNA binding domain EBQ11_10185 PF00874 PRD domain EBQ11_10195 PF05524 PEP-utilising enzyme, N-terminal EBQ11_10195 PF00391 PEP-utilising enzyme, mobile domain EBQ11_10195 PF02896 PEP-utilising enzyme, TIM barrel domain EBQ11_10205 PF00293 NUDIX domain EBQ11_10225 PF02378 Phosphotransferase system, EIIC EBQ11_10225 PF00367 phosphotransferase system, EIIB EBQ11_10230 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 EBQ11_10235 PF00381 PTS HPr component phosphorylation site EBQ11_10255 PF02589 LUD domain EBQ11_10260 PF11870 Domain of unknown function (DUF3390) EBQ11_10260 PF13183 4Fe-4S dicluster domain EBQ11_10260 PF02589 LUD domain EBQ11_10265 PF02754 Cysteine-rich domain EBQ11_10270 PF02652 L-lactate permease EBQ11_10275 PF16995 Transmembrane region of lysyl-tRNA synthetase EBQ11_10275 PF09924 Uncharacterised conserved protein (DUF2156) EBQ11_10275 PF00152 tRNA synthetases class II (D, K and N) EBQ11_10275 PF01336 OB-fold nucleic acid binding domain EBQ11_10290 PF01594 AI-2E family transporter EBQ11_10295 PF02028 BCCT, betaine/carnitine/choline family transporter EBQ11_10300 PF05175 Methyltransferase small domain EBQ11_10315 PF00005 ABC transporter EBQ11_10315 PF13732 Domain of unknown function (DUF4162) EBQ11_10335 PF01053 Cys/Met metabolism PLP-dependent enzyme EBQ11_10340 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase EBQ11_10340 PF16192 C-terminal four TMM region of protein-O-mannosyltransferase EBQ11_10350 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases EBQ11_10355 PF00857 Isochorismatase family EBQ11_10380 PF12671 Putative amidase domain EBQ11_10390 PF09334 tRNA synthetases class I (M) EBQ11_10395 PF01026 TatD related DNase EBQ11_10405 PF00398 Ribosomal RNA adenine dimethylase EBQ11_10410 PF08544 GHMP kinases C terminal EBQ11_10410 PF00288 GHMP kinases N terminal domain EBQ11_10415 PF00005 ABC transporter EBQ11_10415 PF12848 ABC transporter EBQ11_10415 PF16326 ABC transporter C-terminal domain EBQ11_10430 PF13732 Domain of unknown function (DUF4162) EBQ11_10430 PF00005 ABC transporter EBQ11_10445 PF00440 Bacterial regulatory proteins, tetR family EBQ11_10455 PF12804 MobA-like NTP transferase domain EBQ11_10455 PF00132 Bacterial transferase hexapeptide (six repeats) EBQ11_10460 PF14572 Phosphoribosyl synthetase-associated domain EBQ11_10460 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase EBQ11_10465 PF01386 Ribosomal L25p family EBQ11_10465 PF14693 Ribosomal protein TL5, C-terminal domain EBQ11_10470 PF01195 Peptidyl-tRNA hydrolase EBQ11_10475 PF00270 DEAD/DEAH box helicase EBQ11_10475 PF03461 TRCF domain EBQ11_10475 PF00271 Helicase conserved C-terminal domain EBQ11_10475 PF17757 UvrB interaction domain EBQ11_10475 PF02559 CarD-like/TRCF domain EBQ11_10480 PF01156 Inosine-uridine preferring nucleoside hydrolase EBQ11_10485 PF03952 Enolase, N-terminal domain EBQ11_10485 PF00113 Enolase, C-terminal TIM barrel domain EBQ11_10500 PF02541 Ppx/GppA phosphatase family EBQ11_10520 PF00005 ABC transporter EBQ11_10530 PF00392 Bacterial regulatory proteins, gntR family EBQ11_10535 PF00005 ABC transporter EBQ11_10550 PF00171 Aldehyde dehydrogenase family EBQ11_10555 PF00474 Sodium:solute symporter family EBQ11_10570 PF01625 Peptide methionine sulfoxide reductase EBQ11_10575 PF03449 Transcription elongation factor, N-terminal EBQ11_10575 PF01272 Transcription elongation factor, GreA/GreB, C-term EBQ11_10580 PF02585 GlcNAc-PI de-N-acetylase EBQ11_10585 PF03006 Haemolysin-III related EBQ11_10590 PF01255 Putative undecaprenyl diphosphate synthase EBQ11_10595 PF00294 pfkB family carbohydrate kinase EBQ11_10600 PF02609 Exonuclease VII small subunit EBQ11_10605 PF02601 Exonuclease VII, large subunit EBQ11_10605 PF13742 OB-fold nucleic acid binding domain EBQ11_10610 PF02401 LytB protein EBQ11_10625 PF00005 ABC transporter EBQ11_10640 PF03193 RsgA GTPase EBQ11_10645 PF02646 RmuC family EBQ11_10650 PF06071 Protein of unknown function (DUF933) EBQ11_10650 PF01926 50S ribosome-binding GTPase EBQ11_10680 PF00083 Sugar (and other) transporter EBQ11_10680 PF07690 Major Facilitator Superfamily EBQ11_10685 PF07687 Peptidase dimerisation domain EBQ11_10685 PF01546 Peptidase family M20/M25/M40 EBQ11_10690 PF07690 Major Facilitator Superfamily EBQ11_10695 PF00128 Alpha amylase, catalytic domain EBQ11_10700 PF13416 Bacterial extracellular solute-binding protein EBQ11_10705 PF00528 Binding-protein-dependent transport system inner membrane component EBQ11_10710 PF00528 Binding-protein-dependent transport system inner membrane component EBQ11_10715 PF00128 Alpha amylase, catalytic domain EBQ11_10715 PF02903 Alpha amylase, N-terminal ig-like domain EBQ11_10715 PF16657 Maltogenic Amylase, C-terminal domain EBQ11_10720 PF00356 Bacterial regulatory proteins, lacI family EBQ11_10730 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain EBQ11_10730 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain EBQ11_10735 PF00696 Amino acid kinase family EBQ11_10750 PF00083 Sugar (and other) transporter EBQ11_10750 PF08946 Osmosensory transporter coiled coil EBQ11_10755 PF00440 Bacterial regulatory proteins, tetR family EBQ11_10760 PF03358 NADPH-dependent FMN reductase EBQ11_10765 PF00268 Ribonucleotide reductase, small chain EBQ11_10770 PF07972 NrdI Flavodoxin like