locus-tag class description CQ11_00025 IPR041065 GCN5-related N-acetyltransferase-like domain CQ11_00025 IPR036412 HAD-like superfamily CQ11_00025 IPR006357 HAD-superfamily hydrolase, subfamily IIA CQ11_00025 IPR023214 HAD superfamily CQ11_00035 IPR004538 Haemolysin A /rRNA methyltransferase TlyA CQ11_00035 IPR002877 Ribosomal RNA methyltransferase FtsJ domain CQ11_00035 IPR002942 RNA-binding S4 domain CQ11_00035 IPR036986 RNA-binding S4 domain superfamily CQ11_00035 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CQ11_00040 IPR002504 NAD kinase CQ11_00040 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal CQ11_00040 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal CQ11_00040 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily CQ11_00045 IPR003395 RecF/RecN/SMC, N-terminal CQ11_00045 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_00045 IPR004604 DNA recombination/repair protein RecN CQ11_00065 IPR004268 Peptidoglycan biosynthesis protein MurJ CQ11_00080 IPR027434 Homing endonuclease CQ11_00080 IPR036844 Hint domain superfamily CQ11_00080 IPR003587 Hint domain N-terminal CQ11_00080 IPR037284 SUF system FeS cluster assembly, SufBD superfamily CQ11_00080 IPR000825 SUF system FeS cluster assembly, SufBD CQ11_00080 IPR010231 SUF system FeS cluster assembly, SufB CQ11_00080 IPR030934 Intein C-terminal splicing region CQ11_00080 IPR006141 Intein N-terminal splicing region CQ11_00080 IPR003586 Hint domain C-terminal CQ11_00080 IPR006142 Intein CQ11_00080 IPR004042 Intein DOD homing endonuclease CQ11_00085 IPR000825 SUF system FeS cluster assembly, SufBD CQ11_00085 IPR011542 SUF system FeS cluster assembly, SufD CQ11_00085 IPR037284 SUF system FeS cluster assembly, SufBD superfamily CQ11_00090 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily CQ11_00090 IPR023739 3-phenylpropionate/cinnamic acid dioxygenase, ferredoxin subunit CQ11_00090 IPR017941 Rieske [2Fe-2S] iron-sulphur domain CQ11_00095 IPR017871 ABC transporter, conserved site CQ11_00095 IPR010230 FeS cluster assembly SUF system, ATPase SufC CQ11_00095 IPR003439 ABC transporter-like CQ11_00095 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_00095 IPR003593 AAA+ ATPase domain CQ11_00100 IPR000192 Aminotransferase class V domain CQ11_00100 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CQ11_00100 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site CQ11_00100 IPR010970 Cysteine desulfurase, SufS CQ11_00100 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CQ11_00100 IPR015424 Pyridoxal phosphate-dependent transferase CQ11_00110 IPR034904 Fe-S cluster assembly domain superfamily CQ11_00110 IPR002744 MIP18 family-like CQ11_00115 IPR036873 Rhodanese-like domain superfamily CQ11_00115 IPR023695 Thiosulfate sulfurtransferase, bacterial CQ11_00115 IPR001763 Rhodanese-like domain CQ11_00120 IPR017871 ABC transporter, conserved site CQ11_00120 IPR003439 ABC transporter-like CQ11_00120 IPR003593 AAA+ ATPase domain CQ11_00120 IPR032781 ABC-transporter extension domain CQ11_00120 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_00125 IPR029033 Histidine phosphatase superfamily CQ11_00125 IPR013078 Histidine phosphatase superfamily, clade-1 CQ11_00130 IPR036412 HAD-like superfamily CQ11_00130 IPR023214 HAD superfamily CQ11_00130 IPR023190 Phosphoserine phosphatase, domain 2 CQ11_00130 IPR002912 ACT domain CQ11_00145 IPR015854 ABC transporter, lipoprotein release, LolD CQ11_00145 IPR003593 AAA+ ATPase domain CQ11_00145 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_00145 IPR017871 ABC transporter, conserved site CQ11_00145 IPR003439 ABC transporter-like CQ11_00150 IPR011004 Trimeric LpxA-like superfamily CQ11_00150 IPR005836 ADP-glucose pyrophosphorylase, conserved site CQ11_00150 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial CQ11_00150 IPR005835 Nucleotidyl transferase domain CQ11_00150 IPR029044 Nucleotide-diphospho-sugar transferases CQ11_00150 IPR011831 Glucose-1-phosphate adenylyltransferase CQ11_00155 IPR011875 Alpha-maltose-1-phosphate synthase CQ11_00155 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain CQ11_00155 IPR001296 Glycosyl transferase, family 1 CQ11_00160 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_00160 IPR017871 ABC transporter, conserved site CQ11_00160 IPR003439 ABC transporter-like CQ11_00160 IPR003593 AAA+ ATPase domain CQ11_00170 IPR001107 Band 7 domain CQ11_00170 IPR001972 Stomatin family CQ11_00170 IPR018080 Band 7/stomatin-like, conserved site CQ11_00170 IPR036013 Band 7/SPFH domain superfamily CQ11_00175 IPR029064 50S ribosomal protein L30e-like CQ11_00175 IPR029028 Alpha/beta knot methyltransferases CQ11_00175 IPR001537 tRNA/rRNA methyltransferase, SpoU type CQ11_00175 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CQ11_00190 IPR029028 Alpha/beta knot methyltransferases CQ11_00190 IPR001537 tRNA/rRNA methyltransferase, SpoU type CQ11_00190 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase CQ11_00190 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CQ11_00195 IPR008914 Phosphatidylethanolamine-binding protein CQ11_00195 IPR036610 PEBP-like superfamily CQ11_00195 IPR005247 YbhB/YbcL CQ11_00210 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain CQ11_00210 IPR004013 PHP domain CQ11_00210 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type CQ11_00210 IPR029460 DNA polymerase, helix-hairpin-helix motif CQ11_00210 IPR003141 Polymerase/histidinol phosphatase, N-terminal CQ11_00210 IPR016195 Polymerase/histidinol phosphatase-like CQ11_00210 IPR004805 DNA polymerase III, alpha subunit CQ11_00210 IPR023073 DNA polymerase, error-prone CQ11_00210 IPR040982 DNA polymerase III alpha subunit finger domain CQ11_00230 IPR011342 Shikimate dehydrogenase CQ11_00230 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal CQ11_00230 IPR022893 Shikimate dehydrogenase family CQ11_00230 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase CQ11_00230 IPR041121 SDH, C-terminal CQ11_00230 IPR036291 NAD(P)-binding domain superfamily CQ11_00235 IPR029062 Class I glutamine amidotransferase-like CQ11_00235 IPR017926 Glutamine amidotransferase CQ11_00235 IPR022955 GMP synthase CQ11_00235 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CQ11_00235 IPR004739 GMP synthase, glutamine amidotransferase CQ11_00235 IPR001674 GMP synthase, C-terminal CQ11_00235 IPR025777 GMP synthetase ATP pyrophosphatase domain CQ11_00235 IPR022310 NAD/GMP synthase CQ11_00240 IPR006336 Glutamate--cysteine ligase, GCS2 CQ11_00240 IPR011793 Putative glutamate--cysteine ligase YbdK CQ11_00240 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain CQ11_00245 IPR036264 Bacterial exopeptidase dimerisation domain CQ11_00245 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site CQ11_00245 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria CQ11_00245 IPR011650 Peptidase M20, dimerisation domain CQ11_00245 IPR002933 Peptidase M20 CQ11_00255 IPR003824 Undecaprenyl-diphosphatase UppP CQ11_00260 IPR041492 Haloacid dehalogenase-like hydrolase CQ11_00260 IPR006439 HAD hydrolase, subfamily IA CQ11_00260 IPR023214 HAD superfamily CQ11_00260 IPR023198 Phosphoglycolate phosphatase-like, domain 2 CQ11_00260 IPR036412 HAD-like superfamily CQ11_00270 IPR014816 tRNA (1-methyladenosine) methyltransferase catalytic subunit Gcd14 CQ11_00270 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CQ11_00275 IPR022482 Proteasome ATPase CQ11_00275 IPR003959 ATPase, AAA-type, core CQ11_00275 IPR041626 Proteasomal ATPase, N-terminal OB domain CQ11_00275 IPR032501 Proteasomal ATPase OB C-terminal domain CQ11_00275 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_00275 IPR003960 ATPase, AAA-type, conserved site CQ11_00275 IPR003593 AAA+ ATPase domain CQ11_00280 IPR004347 Pup ligase/deamidase CQ11_00280 IPR022366 Pup deamidase CQ11_00285 IPR008515 Ubiquitin-like, Pup CQ11_00290 IPR022279 Pup--protein ligase CQ11_00290 IPR004347 Pup ligase/deamidase CQ11_00305 IPR006062 Histidine biosynthesis CQ11_00305 IPR011060 Ribulose-phosphate binding barrel CQ11_00305 IPR004651 Histidine biosynthesis, HisF CQ11_00305 IPR013785 Aldolase-type TIM barrel CQ11_00310 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain CQ11_00310 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily CQ11_00310 IPR026660 Phosphoribosyl-AMP cyclohydrolase CQ11_00325 IPR015793 Pyruvate kinase, barrel CQ11_00325 IPR018209 Pyruvate kinase, active site CQ11_00325 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily CQ11_00325 IPR040442 Pyruvate kinase-like domain superfamily CQ11_00325 IPR011037 Pyruvate kinase-like, insert domain superfamily CQ11_00325 IPR015806 Pyruvate kinase, insert domain superfamily CQ11_00325 IPR036918 Pyruvate kinase, C-terminal domain superfamily CQ11_00325 IPR001697 Pyruvate kinase CQ11_00325 IPR015795 Pyruvate kinase, C-terminal CQ11_00335 IPR011006 CheY-like superfamily CQ11_00335 IPR036388 Winged helix-like DNA-binding domain superfamily CQ11_00335 IPR005561 ANTAR domain CQ11_00335 IPR001789 Signal transduction response regulator, receiver domain CQ11_00335 IPR008327 Signal transduction response regulator, antiterminator CQ11_00345 IPR029060 PIN-like domain superfamily CQ11_00345 IPR012337 Ribonuclease H-like superfamily CQ11_00345 IPR008918 Helix-hairpin-helix motif, class 2 CQ11_00345 IPR002298 DNA polymerase A CQ11_00345 IPR018320 DNA polymerase 1 CQ11_00345 IPR020045 DNA polymerase I-like, H3TH domain CQ11_00345 IPR019760 DNA-directed DNA polymerase, family A, conserved site CQ11_00345 IPR036279 5'-3' exonuclease, C-terminal domain superfamily CQ11_00345 IPR002421 5'-3' exonuclease, N-terminal CQ11_00345 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal CQ11_00345 IPR002562 3'-5' exonuclease domain CQ11_00345 IPR036397 Ribonuclease H superfamily CQ11_00345 IPR001098 DNA-directed DNA polymerase, family A, palm domain CQ11_00350 IPR022967 RNA-binding domain, S1 CQ11_00350 IPR012340 Nucleic acid-binding, OB-fold CQ11_00350 IPR003029 S1 domain CQ11_00365 IPR003593 AAA+ ATPase domain CQ11_00365 IPR017871 ABC transporter, conserved site CQ11_00365 IPR011924 Lipoprotein releasing system, ATP-binding protein CQ11_00365 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_00365 IPR003439 ABC transporter-like CQ11_00365 IPR015854 ABC transporter, lipoprotein release, LolD CQ11_00370 IPR000816 Peptidase C15, pyroglutamyl peptidase I CQ11_00370 IPR029762 Pyroglutamyl peptidase I, bacterial-type CQ11_00370 IPR033694 Pyroglutamyl peptidase I, Cys active site CQ11_00370 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like CQ11_00370 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily CQ11_00375 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_00375 IPR001977 Dephospho-CoA kinase CQ11_00380 IPR036876 UVR domain superfamily CQ11_00380 IPR001943 UVR domain CQ11_00380 IPR024759 UvrB, YAD/RRR-motif-containing domain CQ11_00380 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_00380 IPR001650 Helicase, C-terminal CQ11_00380 IPR014001 Helicase superfamily 1/2, ATP-binding domain CQ11_00380 IPR006935 Helicase/UvrB, N-terminal CQ11_00380 IPR004807 UvrABC system, subunit B CQ11_00380 IPR041471 UvrB, interaction domain CQ11_00385 IPR022369 Integral membrane protein TerC, riboswitch-linked CQ11_00385 IPR005496 Integral membrane protein TerC CQ11_00390 IPR038770 Sodium/solute symporter superfamily CQ11_00390 IPR016833 Putative sodium bile acid cotransporter CQ11_00400 IPR017871 ABC transporter, conserved site CQ11_00400 IPR003439 ABC transporter-like CQ11_00400 IPR041102 UvrA, interaction domain CQ11_00400 IPR004602 UvrABC system subunit A CQ11_00400 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_00400 IPR041552 UvrA DNA-binding domain CQ11_00405 IPR000305 GIY-YIG endonuclease CQ11_00405 IPR035901 GIY-YIG endonuclease superfamily CQ11_00405 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 CQ11_00405 IPR010994 RuvA domain 2-like CQ11_00405 IPR001943 UVR domain CQ11_00405 IPR004791 UvrABC system, subunit C CQ11_00405 IPR001162 UvrC family homology region CQ11_00405 IPR036876 UVR domain superfamily CQ11_00410 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_00410 IPR005337 RapZ-like family CQ11_00415 IPR038136 Gluconeogenesis factor superfamily CQ11_00415 IPR010119 Gluconeogenesis factor CQ11_00415 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 CQ11_00420 IPR039518 WhiA, LAGLIDADG-like domain CQ11_00420 IPR036388 Winged helix-like DNA-binding domain superfamily CQ11_00420 IPR023054 Sporulation regulator WhiA, C-terminal CQ11_00420 IPR027434 Homing endonuclease CQ11_00420 IPR018478 Sporulation transcription regulator WhiA, N-terminal domain CQ11_00420 IPR003802 Sporulation regulator WhiA CQ11_00425 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site CQ11_00425 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain CQ11_00425 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain CQ11_00425 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I CQ11_00425 IPR036291 NAD(P)-binding domain superfamily CQ11_00425 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family CQ11_00430 IPR015911 Phosphoglycerate kinase, conserved site CQ11_00430 IPR015824 Phosphoglycerate kinase, N-terminal CQ11_00430 IPR001576 Phosphoglycerate kinase CQ11_00430 IPR036043 Phosphoglycerate kinase superfamily CQ11_00435 IPR020861 Triosephosphate isomerase, active site CQ11_00435 IPR035990 Triosephosphate isomerase superfamily CQ11_00435 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic CQ11_00435 IPR000652 Triosephosphate isomerase CQ11_00435 IPR013785 Aldolase-type TIM barrel CQ11_00440 IPR004692 Preprotein translocase SecG subunit CQ11_00450 IPR019796 Glucose-6-phosphate dehydrogenase, active site CQ11_00450 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal CQ11_00450 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding CQ11_00450 IPR036291 NAD(P)-binding domain superfamily CQ11_00450 IPR001282 Glucose-6-phosphate dehydrogenase CQ11_00455 IPR004732 Transaldolase type 2 CQ11_00455 IPR018225 Transaldolase, active site CQ11_00455 IPR013785 Aldolase-type TIM barrel CQ11_00455 IPR001585 Transaldolase/Fructose-6-phosphate aldolase CQ11_00460 IPR033247 Transketolase family CQ11_00460 IPR033248 Transketolase, C-terminal domain CQ11_00460 IPR020826 Transketolase binding site CQ11_00460 IPR005478 Transketolase, bacterial-like CQ11_00460 IPR005475 Transketolase-like, pyrimidine-binding domain CQ11_00460 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II CQ11_00460 IPR029061 Thiamin diphosphate-binding fold CQ11_00460 IPR005474 Transketolase, N-terminal CQ11_00465 IPR002104 Integrase, catalytic domain CQ11_00465 IPR010998 Integrase/recombinase, N-terminal CQ11_00465 IPR004107 Integrase, SAM-like, N-terminal CQ11_00465 IPR011932 Tyrosine recombinase XerD CQ11_00465 IPR013762 Integrase-like, catalytic domain superfamily CQ11_00465 IPR011010 DNA breaking-rejoining enzyme, catalytic core CQ11_00465 IPR023009 Tyrosine recombinase XerC/XerD CQ11_00470 IPR025669 AAA domain CQ11_00470 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_00475 IPR023093 ScpA-like, C-terminal CQ11_00475 IPR003768 Segregation and condensation protein A CQ11_00480 IPR036390 Winged helix DNA-binding domain superfamily CQ11_00480 IPR036388 Winged helix-like DNA-binding domain superfamily CQ11_00480 IPR005234 Chromosome segregation/condensation protein ScpB CQ11_00485 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain CQ11_00485 IPR020103 Pseudouridine synthase, catalytic domain superfamily CQ11_00485 IPR002942 RNA-binding S4 domain CQ11_00485 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site CQ11_00485 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F CQ11_00485 IPR006145 Pseudouridine synthase, RsuA/RluA CQ11_00485 IPR036986 RNA-binding S4 domain superfamily CQ11_00490 IPR011994 Cytidylate kinase domain CQ11_00490 IPR003136 Cytidylate kinase CQ11_00490 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_00495 IPR031166 EngA-type guanine nucleotide-binding (G) domain CQ11_00495 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_00495 IPR015946 K homology domain-like, alpha/beta CQ11_00495 IPR003593 AAA+ ATPase domain CQ11_00495 IPR016484 GTP-binding protein EngA CQ11_00495 IPR032859 GTPase Der, C-terminal KH-domain-like CQ11_00495 IPR006073 GTP binding domain CQ11_00495 IPR005225 Small GTP-binding protein domain CQ11_00500 IPR022953 ATP-dependent 6-phosphofructokinase CQ11_00500 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type CQ11_00500 IPR000023 Phosphofructokinase domain CQ11_00500 IPR012829 Phosphofructokinase, mixed-substrate PFK group III CQ11_00500 IPR035966 Phosphofructokinase superfamily CQ11_00510 IPR042097 Aminopeptidase N-like , N-terminal CQ11_00510 IPR024571 ERAP1-like C-terminal domain CQ11_00510 IPR012778 Peptidase M1, aminopeptidase CQ11_00510 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase CQ11_00510 IPR014782 Peptidase M1, membrane alanine aminopeptidase CQ11_00515 IPR008984 SMAD/FHA domain superfamily CQ11_00515 IPR000253 Forkhead-associated (FHA) domain CQ11_00525 IPR009061 Putative DNA-binding domain superfamily CQ11_00525 IPR000551 MerR-type HTH domain CQ11_00535 IPR025182 RNA polymerase-binding protein RbpA CQ11_00535 IPR038638 RbpA superfamily CQ11_00545 IPR004563 Apolipoprotein N-acyltransferase CQ11_00545 IPR003010 Carbon-nitrogen hydrolase CQ11_00545 IPR029044 Nucleotide-diphospho-sugar transferases CQ11_00545 IPR001173 Glycosyltransferase 2-like CQ11_00545 IPR036526 Carbon-nitrogen hydrolase superfamily CQ11_00545 IPR039528 DPM1-like CQ11_00550 IPR012961 ATP-dependent RNA helicase Ski2, C-terminal CQ11_00550 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_00550 IPR001650 Helicase, C-terminal CQ11_00550 IPR014001 Helicase superfamily 1/2, ATP-binding domain CQ11_00550 IPR011545 DEAD/DEAH box helicase domain CQ11_00555 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal CQ11_00555 IPR001206 Diacylglycerol kinase, catalytic domain CQ11_00555 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily CQ11_00555 IPR005218 Diacylglycerol/lipid kinase CQ11_00580 IPR013820 ATP phosphoribosyltransferase, catalytic domain CQ11_00580 IPR018198 ATP phosphoribosyltransferase, conserved site CQ11_00580 IPR001348 ATP phosphoribosyltransferase HisG CQ11_00580 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CQ11_00580 IPR011322 Nitrogen regulatory PII-like, alpha/beta CQ11_00580 IPR013115 Histidine biosynthesis HisG, C-terminal CQ11_00580 IPR020621 ATP phosphoribosyltransferase HisG, long form CQ11_00585 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase CQ11_00585 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like CQ11_00590 IPR027939 NMT1/THI5 family CQ11_00590 IPR015168 SsuA/THI5-like CQ11_00595 IPR035906 MetI-like superfamily CQ11_00595 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CQ11_00600 IPR013785 Aldolase-type TIM barrel CQ11_00600 IPR026019 Ribulose-phosphate 3-epimerase CQ11_00600 IPR000056 Ribulose-phosphate 3-epimerase-like CQ11_00600 IPR011060 Ribulose-phosphate binding barrel CQ11_00605 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site CQ11_00605 IPR035926 NusB-like superfamily CQ11_00605 IPR006027 NusB/RsmB/TIM44 CQ11_00605 IPR023267 RNA (C5-cytosine) methyltransferase CQ11_00605 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CQ11_00605 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type CQ11_00610 IPR037022 Formyl transferase, C-terminal domain superfamily CQ11_00610 IPR005793 Formyl transferase, C-terminal CQ11_00610 IPR002376 Formyl transferase, N-terminal CQ11_00610 IPR036477 Formyl transferase, N-terminal domain superfamily CQ11_00610 IPR011034 Formyl transferase-like, C-terminal domain superfamily CQ11_00610 IPR005794 Methionyl-tRNA formyltransferase CQ11_00610 IPR041711 Methionyl-tRNA formyltransferase, N-terminal domain CQ11_00615 IPR005259 Primosomal protein N' CQ11_00615 IPR042115 Primosomal protein N', 3' DNA-binding domain superfamily CQ11_00615 IPR041222 Primosomal protein N', 3' DNA-binding domain CQ11_00620 IPR022631 S-adenosylmethionine synthetase, conserved site CQ11_00620 IPR002133 S-adenosylmethionine synthetase CQ11_00620 IPR022628 S-adenosylmethionine synthetase, N-terminal CQ11_00620 IPR022629 S-adenosylmethionine synthetase, central domain CQ11_00620 IPR022630 S-adenosylmethionine synthetase, C-terminal CQ11_00620 IPR022636 S-adenosylmethionine synthetase superfamily CQ11_00625 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC CQ11_00625 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal CQ11_00625 IPR036551 Flavin prenyltransferase-like CQ11_00625 IPR003382 Flavoprotein CQ11_00625 IPR035929 CoaB-like superfamily CQ11_00630 IPR003716 DNA-directed RNA polymerase, omega subunit CQ11_00630 IPR036161 RPB6/omega subunit-like superfamily CQ11_00630 IPR012293 RNA polymerase subunit, RPB6/omega CQ11_00630 IPR006110 RNA polymerase, subunit omega/K/RPB6 CQ11_00635 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_00635 IPR020590 Guanylate kinase, conserved site CQ11_00635 IPR017665 Guanylate kinase CQ11_00635 IPR008144 Guanylate kinase-like domain CQ11_00635 IPR008145 Guanylate kinase/L-type calcium channel beta subunit CQ11_00650 IPR035686 Carbamoyl-phosphate synthase small subunit, GATase1 domain CQ11_00650 IPR017926 Glutamine amidotransferase CQ11_00650 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain CQ11_00650 IPR006274 Carbamoyl-phosphate synthase, small subunit CQ11_00650 IPR029062 Class I glutamine amidotransferase-like CQ11_00650 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily CQ11_00655 IPR011605 NusB antitermination factor CQ11_00655 IPR006027 NusB/RsmB/TIM44 CQ11_00655 IPR035926 NusB-like superfamily CQ11_00660 IPR014722 Ribosomal protein L2, domain 2 CQ11_00660 IPR012340 Nucleic acid-binding, OB-fold CQ11_00660 IPR015365 Elongation factor P, C-terminal CQ11_00660 IPR008991 Translation protein SH3-like domain superfamily CQ11_00660 IPR001059 Translation elongation factor P/YeiP, central CQ11_00660 IPR013185 Translation elongation factor, KOW-like CQ11_00660 IPR013852 Translation elongation factor P/YeiP, conserved site CQ11_00660 IPR020599 Translation elongation factor P/YeiP CQ11_00660 IPR011768 Translation elongation factor P CQ11_00665 IPR018303 P-type ATPase, phosphorylation site CQ11_00665 IPR023299 P-type ATPase, cytoplasmic domain N CQ11_00665 IPR017969 Heavy-metal-associated, conserved site CQ11_00665 IPR023214 HAD superfamily CQ11_00665 IPR006121 Heavy metal-associated domain, HMA CQ11_00665 IPR036412 HAD-like superfamily CQ11_00665 IPR023298 P-type ATPase, transmembrane domain superfamily CQ11_00665 IPR027256 P-type ATPase, subfamily IB CQ11_00665 IPR001757 P-type ATPase CQ11_00665 IPR008250 P-type ATPase, A domain superfamily CQ11_00665 IPR036163 Heavy metal-associated domain superfamily CQ11_00670 IPR023000 Shikimate kinase, conserved site CQ11_00670 IPR000623 Shikimate kinase/Threonine synthase-like 1 CQ11_00670 IPR031322 Shikimate kinase/gluconokinase CQ11_00670 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_00675 IPR031322 Shikimate kinase/gluconokinase CQ11_00675 IPR030960 3-dehydroquinate synthase domain CQ11_00675 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_00675 IPR000623 Shikimate kinase/Threonine synthase-like 1 CQ11_00675 IPR016037 3-dehydroquinate synthase AroB CQ11_00680 IPR020541 Chorismate synthase, conserved site CQ11_00680 IPR035904 Chorismate synthase AroC superfamily CQ11_00680 IPR000453 Chorismate synthase CQ11_00700 IPR012337 Ribonuclease H-like superfamily CQ11_00700 IPR006641 YqgF/RNase H-like domain CQ11_00700 IPR005227 Putative pre-16S rRNA nuclease CQ11_00700 IPR037027 YqgF/RNase H-like domain superfamily CQ11_00705 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily CQ11_00705 IPR003156 DHHA1 domain CQ11_00705 IPR009000 Translation protein, beta-barrel domain superfamily CQ11_00705 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily CQ11_00705 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria CQ11_00705 IPR002318 Alanine-tRNA ligase, class IIc CQ11_00705 IPR018165 Alanyl-tRNA synthetase, class IIc, core domain CQ11_00705 IPR012947 Threonyl/alanyl tRNA synthetase, SAD CQ11_00705 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal CQ11_00715 IPR002942 RNA-binding S4 domain CQ11_00715 IPR001912 Ribosomal protein S4/S9, N-terminal CQ11_00715 IPR036986 RNA-binding S4 domain superfamily CQ11_00715 IPR022801 Ribosomal protein S4/S9 CQ11_00715 IPR005709 Ribosomal protein S4, bacterial-type CQ11_00720 IPR021886 MgsA AAA+ ATPase C-terminal CQ11_00720 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_00720 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal CQ11_00720 IPR003593 AAA+ ATPase domain CQ11_00720 IPR003959 ATPase, AAA-type, core CQ11_00720 IPR032423 AAA C-terminal domain CQ11_00725 IPR004869 Membrane transport protein MMPL domain CQ11_00725 IPR000731 Sterol-sensing domain CQ11_00740 IPR004115 GAD-like domain superfamily CQ11_00740 IPR012340 Nucleic acid-binding, OB-fold CQ11_00740 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb CQ11_00740 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type CQ11_00740 IPR004524 Aspartate-tRNA ligase, type 1 CQ11_00740 IPR029351 GAD domain CQ11_00740 IPR006195 Aminoacyl-tRNA synthetase, class II CQ11_00740 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) CQ11_00750 IPR034415 CsdA, RNA recognition motif CQ11_00750 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain CQ11_00750 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily CQ11_00750 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_00750 IPR014001 Helicase superfamily 1/2, ATP-binding domain CQ11_00750 IPR028618 ATP-dependent RNA helicase DeaD CQ11_00750 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site CQ11_00750 IPR011545 DEAD/DEAH box helicase domain CQ11_00750 IPR014014 RNA helicase, DEAD-box type, Q motif CQ11_00750 IPR001650 Helicase, C-terminal CQ11_00760 IPR004044 K Homology domain, type 2 CQ11_00760 IPR006073 GTP binding domain CQ11_00760 IPR015946 K homology domain-like, alpha/beta CQ11_00760 IPR009019 K homology domain superfamily, prokaryotic type CQ11_00760 IPR005662 GTP-binding protein Era CQ11_00760 IPR030388 Era-type guanine nucleotide-binding (G) domain CQ11_00760 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_00760 IPR005225 Small GTP-binding protein domain CQ11_00765 IPR030388 Era-type guanine nucleotide-binding (G) domain CQ11_00765 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_00765 IPR005225 Small GTP-binding protein domain CQ11_00765 IPR004044 K Homology domain, type 2 CQ11_00765 IPR015946 K homology domain-like, alpha/beta CQ11_00765 IPR005662 GTP-binding protein Era CQ11_00765 IPR009019 K homology domain superfamily, prokaryotic type CQ11_00765 IPR006073 GTP binding domain CQ11_00770 IPR015807 Histidine-tRNA ligase CQ11_00770 IPR036621 Anticodon-binding domain superfamily CQ11_00770 IPR006195 Aminoacyl-tRNA synthetase, class II CQ11_00770 IPR004154 Anticodon-binding CQ11_00770 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain CQ11_00770 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit CQ11_00775 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CQ11_00775 IPR001279 Metallo-beta-lactamase CQ11_00780 IPR007139 Protein of unknown function DUF349 CQ11_00790 IPR002912 ACT domain CQ11_00790 IPR012675 Beta-grasp domain superfamily CQ11_00790 IPR003607 HD/PDEase domain CQ11_00790 IPR004095 TGS CQ11_00790 IPR007685 RelA/SpoT CQ11_00790 IPR004811 RelA/SpoT family CQ11_00790 IPR012676 TGS-like CQ11_00790 IPR033655 RelA, TGS domain CQ11_00795 IPR005764 Adenine phosphoribosyl transferase CQ11_00795 IPR000836 Phosphoribosyltransferase domain CQ11_00795 IPR029057 Phosphoribosyltransferase-like CQ11_00800 IPR005665 Protein-export membrane protein SecF, bacterial CQ11_00800 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site CQ11_00800 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CQ11_00800 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial CQ11_00805 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CQ11_00805 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site CQ11_00805 IPR005791 Protein translocase subunit SecD CQ11_00805 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial CQ11_00815 IPR008824 RuvB-like P-loop domain CQ11_00815 IPR003593 AAA+ ATPase domain CQ11_00815 IPR041445 RuvB, AAA lid domain CQ11_00815 IPR036390 Winged helix DNA-binding domain superfamily CQ11_00815 IPR008823 RuvB C-terminal winged helix domain CQ11_00815 IPR036388 Winged helix-like DNA-binding domain superfamily CQ11_00815 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_00815 IPR004605 DNA helicase, Holliday junction RuvB-type CQ11_00820 IPR036267 RuvA, C-terminal domain superfamily CQ11_00820 IPR011114 Holliday junction DNA helicase RuvA, C-terminal CQ11_00820 IPR010994 RuvA domain 2-like CQ11_00820 IPR000085 Bacterial DNA recombination protein RuvA CQ11_00820 IPR012340 Nucleic acid-binding, OB-fold CQ11_00820 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 CQ11_00820 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial CQ11_00825 IPR012337 Ribonuclease H-like superfamily CQ11_00825 IPR036397 Ribonuclease H superfamily CQ11_00825 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site CQ11_00825 IPR002176 Crossover junction endodeoxyribonuclease RuvC CQ11_00830 IPR017856 Integrase-like, N-terminal CQ11_00830 IPR002876 Transcriptional regulator TACO1-like CQ11_00830 IPR026564 Transcriptional regulator TACO1-like, domain 3 CQ11_00830 IPR029072 YebC-like CQ11_00835 IPR020476 NUDIX hydrolase CQ11_00835 IPR020084 NUDIX hydrolase, conserved site CQ11_00835 IPR000086 NUDIX hydrolase domain CQ11_00835 IPR015797 NUDIX hydrolase-like domain superfamily CQ11_00835 IPR022927 RNA pyrophosphohydrolase RppH CQ11_00845 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain CQ11_00860 IPR004095 TGS CQ11_00860 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) CQ11_00860 IPR002320 Threonine-tRNA ligase, class IIa CQ11_00860 IPR004154 Anticodon-binding CQ11_00860 IPR033728 Threonine-tRNA ligase catalytic core domain CQ11_00860 IPR012947 Threonyl/alanyl tRNA synthetase, SAD CQ11_00860 IPR006195 Aminoacyl-tRNA synthetase, class II CQ11_00860 IPR036621 Anticodon-binding domain superfamily CQ11_00860 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily CQ11_00865 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form CQ11_00865 IPR005131 Serine dehydratase beta chain CQ11_00865 IPR005130 Serine dehydratase-like, alpha subunit CQ11_00865 IPR029009 Allosteric substrate binding domain superfamily CQ11_00870 IPR001789 Signal transduction response regulator, receiver domain CQ11_00870 IPR016032 Signal transduction response regulator, C-terminal effector CQ11_00870 IPR000792 Transcription regulator LuxR, C-terminal CQ11_00870 IPR011006 CheY-like superfamily CQ11_00910 IPR017853 Glycoside hydrolase superfamily CQ11_00910 IPR011837 Glycogen debranching enzyme, GlgX type CQ11_00910 IPR013780 Glycosyl hydrolase, all-beta CQ11_00910 IPR014756 Immunoglobulin E-set CQ11_00910 IPR004193 Glycoside hydrolase, family 13, N-terminal CQ11_00910 IPR006047 Glycosyl hydrolase, family 13, catalytic domain CQ11_00910 IPR013783 Immunoglobulin-like fold CQ11_00915 IPR012767 Maltooligosyl trehalose synthase CQ11_00915 IPR017853 Glycoside hydrolase superfamily CQ11_00915 IPR006047 Glycosyl hydrolase, family 13, catalytic domain CQ11_00920 IPR012768 Malto-oligosyltrehalose trehalohydrolase CQ11_00920 IPR004193 Glycoside hydrolase, family 13, N-terminal CQ11_00920 IPR017853 Glycoside hydrolase superfamily CQ11_00920 IPR013783 Immunoglobulin-like fold CQ11_00920 IPR006047 Glycosyl hydrolase, family 13, catalytic domain CQ11_00920 IPR014756 Immunoglobulin E-set CQ11_00935 IPR005477 Deoxyxylulose-5-phosphate synthase CQ11_00935 IPR029061 Thiamin diphosphate-binding fold CQ11_00935 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II CQ11_00935 IPR005475 Transketolase-like, pyrimidine-binding domain CQ11_00935 IPR033248 Transketolase, C-terminal domain CQ11_00935 IPR005474 Transketolase, N-terminal CQ11_00935 IPR020826 Transketolase binding site CQ11_00945 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain CQ11_00945 IPR036008 Aconitase, iron-sulfur domain CQ11_00945 IPR018136 Aconitase family, 4Fe-4S cluster binding site CQ11_00945 IPR006249 Aconitase/Iron-responsive element-binding protein 2 CQ11_00945 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CQ11_00945 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain CQ11_00950 IPR030390 RNA methyltransferase TrmA, active site CQ11_00950 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CQ11_00950 IPR012340 Nucleic acid-binding, OB-fold CQ11_00950 IPR010280 (Uracil-5)-methyltransferase family CQ11_00960 IPR003148 Regulator of K+ conductance, N-terminal CQ11_00960 IPR006037 Regulator of K+ conductance, C-terminal CQ11_00960 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily CQ11_00960 IPR036291 NAD(P)-binding domain superfamily CQ11_00960 IPR006036 Potassium uptake protein TrkA CQ11_01005 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily CQ11_01005 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta CQ11_01005 IPR013760 DNA topoisomerase, type IIA-like domain superfamily CQ11_01005 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal CQ11_01005 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal CQ11_01005 IPR005743 DNA gyrase, subunit A CQ11_01005 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat CQ11_01020 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CQ11_01020 IPR013760 DNA topoisomerase, type IIA-like domain superfamily CQ11_01020 IPR006171 TOPRIM domain CQ11_01020 IPR020568 Ribosomal protein S5 domain 2-type fold CQ11_01020 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CQ11_01020 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 CQ11_01020 IPR018522 DNA topoisomerase, type IIA, conserved site CQ11_01020 IPR034160 DNA gyrase subunit B, TOPRIM domain CQ11_01020 IPR002288 DNA gyrase B subunit, C-terminal CQ11_01020 IPR011557 DNA gyrase, subunit B CQ11_01020 IPR003594 Histidine kinase/HSP90-like ATPase CQ11_01020 IPR001241 DNA topoisomerase, type IIA CQ11_01020 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal CQ11_01030 IPR006935 Helicase/UvrB, N-terminal CQ11_01030 IPR006310 3'-5' exonuclease DinG CQ11_01030 IPR036397 Ribonuclease H superfamily CQ11_01030 IPR014013 Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type CQ11_01030 IPR012337 Ribonuclease H-like superfamily CQ11_01030 IPR013520 Exonuclease, RNase T/DNA polymerase III CQ11_01030 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_01030 IPR001650 Helicase, C-terminal CQ11_01030 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain CQ11_01030 IPR006555 ATP-dependent helicase, C-terminal CQ11_01035 IPR007624 RNA polymerase sigma-70 region 3 CQ11_01035 IPR012760 RNA polymerase sigma factor RpoD, C-terminal CQ11_01035 IPR013325 RNA polymerase sigma factor, region 2 CQ11_01035 IPR013324 RNA polymerase sigma factor, region 3/4-like CQ11_01035 IPR036388 Winged helix-like DNA-binding domain superfamily CQ11_01035 IPR028630 RNA polymerase sigma factor RpoD CQ11_01035 IPR007630 RNA polymerase sigma-70 region 4 CQ11_01035 IPR007627 RNA polymerase sigma-70 region 2 CQ11_01035 IPR000943 RNA polymerase sigma-70 CQ11_01035 IPR014284 RNA polymerase sigma-70 like domain CQ11_01035 IPR009042 RNA polymerase sigma-70 region 1.2 CQ11_01060 IPR000189 Prokaryotic transglycosylase, active site CQ11_01060 IPR023346 Lysozyme-like domain superfamily CQ11_01060 IPR023664 Murein transglycosylase-C CQ11_01060 IPR024570 Murein transglycosylase-C, N-terminal CQ11_01060 IPR008258 Transglycosylase SLT domain 1 CQ11_01065 IPR005543 PASTA domain CQ11_01065 IPR000719 Protein kinase domain CQ11_01065 IPR008271 Serine/threonine-protein kinase, active site CQ11_01065 IPR011009 Protein kinase-like domain superfamily CQ11_01070 IPR013785 Aldolase-type TIM barrel CQ11_01070 IPR002480 DAHP synthetase, class II CQ11_01075 IPR000023 Phosphofructokinase domain CQ11_01075 IPR011405 Pyrophosphate-dependent phosphofructokinase SMc01852 type CQ11_01075 IPR022953 ATP-dependent 6-phosphofructokinase CQ11_01075 IPR035966 Phosphofructokinase superfamily CQ11_01085 IPR036397 Ribonuclease H superfamily CQ11_01085 IPR012337 Ribonuclease H-like superfamily CQ11_01085 IPR035901 GIY-YIG endonuclease superfamily CQ11_01085 IPR013520 Exonuclease, RNase T/DNA polymerase III CQ11_01085 IPR000305 GIY-YIG endonuclease CQ11_01085 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain CQ11_01090 IPR011006 CheY-like superfamily CQ11_01090 IPR001789 Signal transduction response regulator, receiver domain CQ11_01095 IPR019832 Manganese/iron superoxide dismutase, C-terminal CQ11_01095 IPR019831 Manganese/iron superoxide dismutase, N-terminal CQ11_01095 IPR019833 Manganese/iron superoxide dismutase, binding site CQ11_01095 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily CQ11_01095 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily CQ11_01095 IPR001189 Manganese/iron superoxide dismutase CQ11_01105 IPR017870 FeS cluster insertion, C-terminal, conserved site CQ11_01105 IPR035903 HesB-like domain superfamily CQ11_01105 IPR000361 FeS cluster biogenesis CQ11_01105 IPR016092 FeS cluster insertion protein CQ11_01115 IPR011650 Peptidase M20, dimerisation domain CQ11_01115 IPR002933 Peptidase M20 CQ11_01115 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria CQ11_01115 IPR036264 Bacterial exopeptidase dimerisation domain CQ11_01130 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal CQ11_01130 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal CQ11_01130 IPR023042 Peptidase M17, leucine aminopeptidase CQ11_01130 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B CQ11_01140 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CQ11_01140 IPR023753 FAD/NAD(P)-binding domain CQ11_01140 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I CQ11_01140 IPR036188 FAD/NAD(P)-binding domain superfamily CQ11_01140 IPR006258 Dihydrolipoamide dehydrogenase CQ11_01140 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily CQ11_01140 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site CQ11_01145 IPR011053 Single hybrid motif CQ11_01145 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site CQ11_01145 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain CQ11_01145 IPR014276 2-oxoglutarate dehydrogenase, E2 component CQ11_01145 IPR000089 Biotin/lipoyl attachment CQ11_01145 IPR004167 Peripheral subunit-binding domain CQ11_01145 IPR036625 E3-binding domain superfamily CQ11_01145 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily CQ11_01165 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain CQ11_01165 IPR036651 Glutamine synthetase, N-terminal domain superfamily CQ11_01165 IPR008147 Glutamine synthetase, beta-Grasp domain CQ11_01165 IPR008146 Glutamine synthetase, catalytic domain CQ11_01165 IPR004809 Glutamine synthetase type I CQ11_01165 IPR027303 Glutamine synthetase, glycine-rich site CQ11_01165 IPR001637 Glutamine synthetase class-I, adenylation site CQ11_01165 IPR027302 Glutamine synthetase, N-terminal conserved site CQ11_01175 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase CQ11_01175 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain CQ11_01175 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme CQ11_01180 IPR008147 Glutamine synthetase, beta-Grasp domain CQ11_01180 IPR036651 Glutamine synthetase, N-terminal domain superfamily CQ11_01180 IPR004809 Glutamine synthetase type I CQ11_01180 IPR027303 Glutamine synthetase, glycine-rich site CQ11_01180 IPR008146 Glutamine synthetase, catalytic domain CQ11_01180 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain CQ11_01190 IPR001714 Peptidase M24, methionine aminopeptidase CQ11_01190 IPR036005 Creatinase/aminopeptidase-like CQ11_01190 IPR000994 Peptidase M24 CQ11_01190 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 CQ11_01195 IPR000600 ROK family CQ11_01210 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily CQ11_01210 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 CQ11_01215 IPR003691 Putative fluoride ion transporter CrcB CQ11_01220 IPR003691 Putative fluoride ion transporter CrcB CQ11_01250 IPR041621 Pyruvate dehydrogenase E1 component, middle domain CQ11_01250 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II CQ11_01250 IPR035807 Pyruvate dehydrogenase E1 component, N-terminal CQ11_01250 IPR005474 Transketolase, N-terminal CQ11_01250 IPR004660 Pyruvate dehydrogenase E1 component CQ11_01250 IPR029061 Thiamin diphosphate-binding fold CQ11_01255 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_01255 IPR039421 Type I protein exporter CQ11_01255 IPR003593 AAA+ ATPase domain CQ11_01255 IPR011527 ABC transporter type 1, transmembrane domain CQ11_01255 IPR036640 ABC transporter type 1, transmembrane domain superfamily CQ11_01255 IPR003439 ABC transporter-like CQ11_01255 IPR017871 ABC transporter, conserved site CQ11_01260 IPR017871 ABC transporter, conserved site CQ11_01260 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_01260 IPR039421 Type I protein exporter CQ11_01260 IPR036640 ABC transporter type 1, transmembrane domain superfamily CQ11_01260 IPR011527 ABC transporter type 1, transmembrane domain CQ11_01260 IPR003593 AAA+ ATPase domain CQ11_01260 IPR003439 ABC transporter-like CQ11_01270 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily CQ11_01270 IPR006070 YrdC-like domain CQ11_01290 IPR001509 NAD-dependent epimerase/dehydratase CQ11_01290 IPR013549 Domain of unknown function DUF1731 CQ11_01290 IPR010099 Epimerase family protein SDR39U1 CQ11_01290 IPR036291 NAD(P)-binding domain superfamily CQ11_01295 IPR023635 Peptide deformylase CQ11_01295 IPR036821 Peptide deformylase superfamily CQ11_01305 IPR004107 Integrase, SAM-like, N-terminal CQ11_01305 IPR023009 Tyrosine recombinase XerC/XerD CQ11_01305 IPR010998 Integrase/recombinase, N-terminal CQ11_01305 IPR002104 Integrase, catalytic domain CQ11_01305 IPR011010 DNA breaking-rejoining enzyme, catalytic core CQ11_01305 IPR013762 Integrase-like, catalytic domain superfamily CQ11_01455 IPR000522 ABC transporter, permease protein, BtuC-like CQ11_01455 IPR037294 ABC transporter, BtuC-like CQ11_01485 IPR018448 Twin-arginine translocation protein TatB CQ11_01485 IPR003369 Sec-independent protein translocase protein TatA/B/E CQ11_01490 IPR006312 Sec-independent protein translocase protein TatA/E CQ11_01490 IPR003369 Sec-independent protein translocase protein TatA/B/E CQ11_01495 IPR002033 Sec-independent periplasmic protein translocase TatC CQ11_01505 IPR036977 DNA Primase, CHC2-type zinc finger CQ11_01505 IPR013173 DNA primase DnaG, DnaB-binding domain CQ11_01505 IPR002694 Zinc finger, CHC2-type CQ11_01505 IPR019475 DNA primase, DnaB-helicase binding domain CQ11_01505 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily CQ11_01505 IPR013264 DNA primase, catalytic core, N-terminal CQ11_01505 IPR006171 TOPRIM domain CQ11_01505 IPR030846 DNA primase DnaG, bacteria CQ11_01505 IPR006295 DNA primase, DnaG CQ11_01505 IPR034151 Bacterial DnaG primase, TOPRIM domain CQ11_01510 IPR026875 Phosphohydrolase-associated domain CQ11_01510 IPR006674 HD domain CQ11_01510 IPR003607 HD/PDEase domain CQ11_01510 IPR006261 dNTP triphosphohydrolase CQ11_01520 IPR001269 tRNA-dihydrouridine synthase CQ11_01520 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal CQ11_01520 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 CQ11_01520 IPR018517 tRNA-dihydrouridine synthase, conserved site CQ11_01520 IPR035587 DUS-like, FMN-binding domain CQ11_01520 IPR013785 Aldolase-type TIM barrel CQ11_01530 IPR022961 Glycine-tRNA ligase, bacterial CQ11_01530 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) CQ11_01530 IPR006195 Aminoacyl-tRNA synthetase, class II CQ11_01530 IPR027031 Glycyl-tRNA synthetase/DNA polymerase subunit gamma-2 CQ11_01530 IPR036621 Anticodon-binding domain superfamily CQ11_01530 IPR002315 Glycyl-tRNA synthetase CQ11_01530 IPR033731 Glycyl-tRNA synthetase-like core domain CQ11_01530 IPR004154 Anticodon-binding CQ11_01540 IPR017871 ABC transporter, conserved site CQ11_01540 IPR003593 AAA+ ATPase domain CQ11_01540 IPR003439 ABC transporter-like CQ11_01540 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_01545 IPR001626 ABC transporter, TroCD-like CQ11_01545 IPR037294 ABC transporter, BtuC-like CQ11_01550 IPR036390 Winged helix DNA-binding domain superfamily CQ11_01550 IPR036388 Winged helix-like DNA-binding domain superfamily CQ11_01550 IPR002481 Ferric-uptake regulator CQ11_01565 IPR004805 DNA polymerase III, alpha subunit CQ11_01565 IPR016195 Polymerase/histidinol phosphatase-like CQ11_01565 IPR003141 Polymerase/histidinol phosphatase, N-terminal CQ11_01565 IPR029460 DNA polymerase, helix-hairpin-helix motif CQ11_01565 IPR040982 DNA polymerase III alpha subunit finger domain CQ11_01565 IPR004013 PHP domain CQ11_01565 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain CQ11_01565 IPR041931 Bacterial DNA polymerase III alpha subunit, thumb domain CQ11_01575 IPR002942 RNA-binding S4 domain CQ11_01575 IPR006145 Pseudouridine synthase, RsuA/RluA CQ11_01575 IPR006225 Pseudouridine synthase, RluC/RluD CQ11_01575 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site CQ11_01575 IPR020103 Pseudouridine synthase, catalytic domain superfamily CQ11_01575 IPR036986 RNA-binding S4 domain superfamily CQ11_01580 IPR001872 Peptidase A8, signal peptidase II CQ11_01595 IPR023052 Cell division protein SepF CQ11_01595 IPR007561 Cell division protein SepF/SepF-related CQ11_01595 IPR038594 SepF-like superfamily CQ11_01605 IPR000158 Cell division protein FtsZ CQ11_01605 IPR020805 Cell division protein FtsZ, conserved site CQ11_01605 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain CQ11_01605 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily CQ11_01605 IPR008280 Tubulin/FtsZ, C-terminal CQ11_01605 IPR036525 Tubulin/FtsZ, GTPase domain superfamily CQ11_01605 IPR003008 Tubulin/FtsZ, GTPase domain CQ11_01605 IPR024757 Cell division protein FtsZ, C-terminal CQ11_01620 IPR006009 N-acetylglucosaminyltransferase, MurG CQ11_01620 IPR004276 Glycosyltransferase family 28, N-terminal domain CQ11_01620 IPR007235 Glycosyl transferase, family 28, C-terminal CQ11_01625 IPR013437 Probable peptidoglycan glycosyltransferase FtsW CQ11_01625 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA CQ11_01625 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site CQ11_01630 IPR013221 Mur ligase, central CQ11_01630 IPR018109 Folylpolyglutamate synthetase, conserved site CQ11_01630 IPR036565 Mur-like, catalytic domain superfamily CQ11_01630 IPR004101 Mur ligase, C-terminal CQ11_01630 IPR036615 Mur ligase, C-terminal domain superfamily CQ11_01630 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase CQ11_01635 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site CQ11_01635 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase CQ11_01635 IPR000715 Glycosyl transferase, family 4 CQ11_01640 IPR013221 Mur ligase, central CQ11_01640 IPR000713 Mur ligase, N-terminal catalytic domain CQ11_01640 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase CQ11_01640 IPR036615 Mur ligase, C-terminal domain superfamily CQ11_01640 IPR036565 Mur-like, catalytic domain superfamily CQ11_01640 IPR035911 MurE/MurF, N-terminal CQ11_01640 IPR004101 Mur ligase, C-terminal CQ11_01645 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase CQ11_01645 IPR004101 Mur ligase, C-terminal CQ11_01645 IPR036615 Mur ligase, C-terminal domain superfamily CQ11_01645 IPR013221 Mur ligase, central CQ11_01645 IPR000713 Mur ligase, N-terminal catalytic domain CQ11_01645 IPR035911 MurE/MurF, N-terminal CQ11_01645 IPR036565 Mur-like, catalytic domain superfamily CQ11_01650 IPR036138 Penicillin-binding protein, dimerisation domain superfamily CQ11_01650 IPR005311 Penicillin-binding protein, dimerisation domain CQ11_01650 IPR001460 Penicillin-binding protein, transpeptidase CQ11_01650 IPR012338 Beta-lactamase/transpeptidase-like CQ11_01660 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CQ11_01660 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily CQ11_01660 IPR002903 Ribosomal RNA small subunit methyltransferase H CQ11_01665 IPR035644 MraZ, C-terminal CQ11_01665 IPR003444 Transcriptional regulator MraZ CQ11_01665 IPR035642 MraZ, N-terminal CQ11_01665 IPR020603 MraZ domain CQ11_01665 IPR037914 SpoVT-AbrB domain superfamily CQ11_01665 IPR038619 MraZ superfamily CQ11_01665 IPR007159 SpoVT-AbrB domain CQ11_01695 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CQ11_01695 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CQ11_01695 IPR036291 NAD(P)-binding domain superfamily CQ11_01695 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain CQ11_01695 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 CQ11_01695 IPR002912 ACT domain CQ11_01700 IPR020845 AMP-binding, conserved site CQ11_01700 IPR000873 AMP-dependent synthetase/ligase CQ11_01700 IPR042099 AMP-dependent synthetase-like superfamily CQ11_01700 IPR025110 AMP-binding enzyme, C-terminal domain CQ11_01715 IPR015927 Peptidase S24/S26A/S26B/S26C CQ11_01715 IPR036390 Winged helix DNA-binding domain superfamily CQ11_01715 IPR039418 LexA-like CQ11_01715 IPR006200 Transcription regulator LexA CQ11_01715 IPR006197 Peptidase S24, LexA-like CQ11_01715 IPR036388 Winged helix-like DNA-binding domain superfamily CQ11_01715 IPR006199 LexA repressor, DNA-binding domain CQ11_01715 IPR036286 LexA/Signal peptidase-like superfamily CQ11_01720 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_01720 IPR014001 Helicase superfamily 1/2, ATP-binding domain CQ11_01720 IPR014013 Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type CQ11_01720 IPR006555 ATP-dependent helicase, C-terminal CQ11_01725 IPR025121 GTPase HflX, N-terminal CQ11_01725 IPR042108 GTPase HflX, N-terminal domain superfamily CQ11_01725 IPR006073 GTP binding domain CQ11_01725 IPR016496 GTPase HflX CQ11_01725 IPR032305 GTP-binding protein, middle domain CQ11_01725 IPR030394 HflX-type guanine nucleotide-binding (G) domain CQ11_01725 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_01730 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CQ11_01730 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CQ11_01730 IPR023543 rRNA small subunit methyltransferase C CQ11_01730 IPR007848 Methyltransferase small domain CQ11_01730 IPR013675 Methyltransferase small, N-terminal CQ11_01735 IPR039657 Dimethylallyltransferase CQ11_01735 IPR018022 IPP transferase CQ11_01735 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_01740 IPR023404 Radical SAM, alpha/beta horseshoe CQ11_01740 IPR002792 TRAM domain CQ11_01740 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB CQ11_01740 IPR006638 Elp3/MiaB/NifB CQ11_01740 IPR007197 Radical SAM CQ11_01740 IPR005839 Methylthiotransferase CQ11_01740 IPR020612 Methylthiotransferase, conserved site CQ11_01740 IPR038135 Methylthiotransferase, N-terminal domain superfamily CQ11_01740 IPR013848 Methylthiotransferase, N-terminal CQ11_01745 IPR003783 Regulatory protein RecX CQ11_01745 IPR036388 Winged helix-like DNA-binding domain superfamily CQ11_01745 IPR036390 Winged helix DNA-binding domain superfamily CQ11_01750 IPR020584 DNA recombination/repair protein RecA, conserved site CQ11_01750 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_01750 IPR020587 DNA recombination and repair protein RecA, monomer-monomer interface CQ11_01750 IPR023400 DNA recombination and repair protein RecA, C-terminal CQ11_01750 IPR003593 AAA+ ATPase domain CQ11_01750 IPR013765 DNA recombination and repair protein RecA CQ11_01750 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain CQ11_01760 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CQ11_01760 IPR001387 Cro/C1-type helix-turn-helix domain CQ11_01765 IPR041424 CinA, KH domain CQ11_01765 IPR001453 MoaB/Mog domain CQ11_01765 IPR036425 MoaB/Mog-like domain superfamily CQ11_01765 IPR036653 CinA-like, C-terminal CQ11_01765 IPR008135 Competence-induced protein CinA CQ11_01765 IPR008136 CinA, C-terminal CQ11_01780 IPR003593 AAA+ ATPase domain CQ11_01780 IPR036388 Winged helix-like DNA-binding domain superfamily CQ11_01780 IPR041027 FtsK alpha domain CQ11_01780 IPR002543 FtsK domain CQ11_01780 IPR018541 FtsK gamma domain CQ11_01780 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_01780 IPR036390 Winged helix DNA-binding domain superfamily CQ11_01785 IPR041636 Ribonuclease J, C-terminal CQ11_01785 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain CQ11_01785 IPR030854 Ribonuclease J, bacteria CQ11_01785 IPR004613 Ribonuclease J CQ11_01785 IPR042173 Ribonuclease J, domain 2 CQ11_01785 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CQ11_01785 IPR001279 Metallo-beta-lactamase CQ11_01790 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA CQ11_01790 IPR013785 Aldolase-type TIM barrel CQ11_01790 IPR002220 DapA-like CQ11_01790 IPR020625 Schiff base-forming aldolase, active site CQ11_01790 IPR020624 Schiff base-forming aldolase, conserved site CQ11_01800 IPR014001 Helicase superfamily 1/2, ATP-binding domain CQ11_01800 IPR022138 Helicase SWF/SNF-related CQ11_01800 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_01800 IPR000330 SNF2-related, N-terminal domain CQ11_01800 IPR038718 SNF2-like, N-terminal domain superfamily CQ11_01800 IPR001650 Helicase, C-terminal CQ11_01805 IPR036291 NAD(P)-binding domain superfamily CQ11_01805 IPR023940 Dihydrodipicolinate reductase CQ11_01805 IPR022664 Dihydrodipicolinate reductase, conserved site CQ11_01805 IPR000846 Dihydrodipicolinate reductase, N-terminal CQ11_01805 IPR022663 Dihydrodipicolinate reductase, C-terminal CQ11_01810 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like CQ11_01810 IPR011765 Peptidase M16, N-terminal CQ11_01810 IPR001431 Peptidase M16, zinc-binding site CQ11_01810 IPR007863 Peptidase M16, C-terminal CQ11_01820 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily CQ11_01820 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain CQ11_01820 IPR004088 K Homology domain, type 1 CQ11_01820 IPR027408 PNPase/RNase PH domain superfamily CQ11_01820 IPR012340 Nucleic acid-binding, OB-fold CQ11_01820 IPR012162 Polyribonucleotide nucleotidyltransferase CQ11_01820 IPR020568 Ribosomal protein S5 domain 2-type fold CQ11_01820 IPR004087 K Homology domain CQ11_01820 IPR022967 RNA-binding domain, S1 CQ11_01820 IPR014069 Guanosine pentaphosphate synthetase I/polyribonucleotide nucleotidyltransferase CQ11_01820 IPR036345 Exoribonuclease, PH domain 2 superfamily CQ11_01820 IPR003029 S1 domain CQ11_01820 IPR036612 K Homology domain, type 1 superfamily CQ11_01820 IPR001247 Exoribonuclease, phosphorolytic domain 1 CQ11_01825 IPR009068 S15/NS1, RNA-binding CQ11_01825 IPR005290 Ribosomal protein S15, bacterial-type CQ11_01825 IPR000589 Ribosomal protein S15 CQ11_01835 IPR000412 ABC-2 transporter CQ11_01835 IPR003439 ABC transporter-like CQ11_01835 IPR003593 AAA+ ATPase domain CQ11_01835 IPR017871 ABC transporter, conserved site CQ11_01835 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_01845 IPR023465 Riboflavin kinase domain superfamily CQ11_01845 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic CQ11_01845 IPR002606 Riboflavin kinase, bacterial CQ11_01845 IPR023468 Riboflavin kinase CQ11_01845 IPR015864 FAD synthetase CQ11_01845 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CQ11_01865 IPR017871 ABC transporter, conserved site CQ11_01865 IPR013611 Transport-associated OB, type 2 CQ11_01865 IPR008995 Molybdate/tungstate binding, C-terminal CQ11_01865 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit CQ11_01865 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_01865 IPR003593 AAA+ ATPase domain CQ11_01865 IPR017879 ABC transporter, spermidine/putrescine import ATP-binding protein, PotA CQ11_01865 IPR003439 ABC transporter-like CQ11_01875 IPR036259 MFS transporter superfamily CQ11_01875 IPR020846 Major facilitator superfamily domain CQ11_01875 IPR011701 Major facilitator superfamily CQ11_01875 IPR021159 Glycerate/sugar phosphate transporter, conserved site CQ11_01875 IPR000849 Sugar phosphate transporter CQ11_01875 IPR005267 Glycerol-3-phosphate transporter CQ11_01880 IPR011006 CheY-like superfamily CQ11_01880 IPR001867 OmpR/PhoB-type DNA-binding domain CQ11_01880 IPR016032 Signal transduction response regulator, C-terminal effector CQ11_01880 IPR036388 Winged helix-like DNA-binding domain superfamily CQ11_01880 IPR001789 Signal transduction response regulator, receiver domain CQ11_01880 IPR039420 Transcriptional regulatory protein WalR-like CQ11_01885 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CQ11_01885 IPR005467 Histidine kinase domain CQ11_01885 IPR003594 Histidine kinase/HSP90-like ATPase CQ11_01885 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CQ11_01885 IPR013767 PAS fold CQ11_01885 IPR003660 HAMP domain CQ11_01885 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CQ11_01885 IPR000700 PAS-associated, C-terminal CQ11_01885 IPR000014 PAS domain CQ11_01885 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CQ11_01885 IPR035965 PAS domain superfamily CQ11_01890 IPR015225 tRNA pseudouridine synthase II, TruB, subfamily 2, C-terminal CQ11_01890 IPR002501 Pseudouridine synthase II, N-terminal CQ11_01890 IPR015947 PUA-like superfamily CQ11_01890 IPR020103 Pseudouridine synthase, catalytic domain superfamily CQ11_01890 IPR036974 PUA domain superfamily CQ11_01890 IPR032819 tRNA pseudouridylate synthase B, C-terminal CQ11_01890 IPR014780 tRNA pseudouridine synthase II, TruB CQ11_01895 IPR020053 Ribosome-binding factor A, conserved site CQ11_01895 IPR023799 Ribosome-binding factor A domain superfamily CQ11_01895 IPR000238 Ribosome-binding factor A CQ11_01895 IPR015946 K homology domain-like, alpha/beta CQ11_01900 IPR023115 Translation initiation factor IF- 2, domain 3 CQ11_01900 IPR015760 Translation initiation factor IF- 2 CQ11_01900 IPR009000 Translation protein, beta-barrel domain superfamily CQ11_01900 IPR000795 Transcription factor, GTP-binding domain CQ11_01900 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_01900 IPR006847 Translation initiation factor IF-2, N-terminal CQ11_01900 IPR036925 Translation initiation factor IF-2, domain 3 superfamily CQ11_01900 IPR000178 Translation initiation factor aIF-2, bacterial-like CQ11_01900 IPR005225 Small GTP-binding protein domain CQ11_01910 IPR012340 Nucleic acid-binding, OB-fold CQ11_01910 IPR025249 KH domain, NusA-like CQ11_01910 IPR009019 K homology domain superfamily, prokaryotic type CQ11_01910 IPR036555 NusA, N-terminal domain superfamily CQ11_01910 IPR022967 RNA-binding domain, S1 CQ11_01910 IPR030842 Transcription termination/antitermination protein NusA, bacterial CQ11_01910 IPR013735 Transcription factor NusA, N-terminal CQ11_01910 IPR010213 Transcription termination factor NusA CQ11_01910 IPR015946 K homology domain-like, alpha/beta CQ11_01910 IPR003029 S1 domain CQ11_01915 IPR035956 RimP, N-terminal domain superfamily CQ11_01915 IPR003728 Ribosome maturation factor RimP CQ11_01915 IPR028998 Ribosome maturation factor RimP, C-terminal CQ11_01915 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily CQ11_01915 IPR028989 Ribosome maturation factor RimP, N-terminal CQ11_01925 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily CQ11_01925 IPR033730 Prokaryote proline-tRNA ligase core domain CQ11_01925 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain CQ11_01925 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type CQ11_01925 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 CQ11_01925 IPR006195 Aminoacyl-tRNA synthetase, class II CQ11_01925 IPR004154 Anticodon-binding CQ11_01925 IPR036621 Anticodon-binding domain superfamily CQ11_01925 IPR002316 Proline-tRNA ligase, class IIa CQ11_01925 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) CQ11_01935 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial CQ11_01935 IPR011005 Dihydropteroate synthase-like CQ11_01935 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type CQ11_01940 IPR001478 PDZ domain CQ11_01940 IPR041489 PDZ domain 6 CQ11_01940 IPR036034 PDZ superfamily CQ11_01940 IPR008915 Peptidase M50 CQ11_01945 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal CQ11_01945 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal CQ11_01945 IPR026877 DXP reductoisomerase C-terminal domain CQ11_01945 IPR036169 DXP reductoisomerase, C-terminal domain superfamily CQ11_01945 IPR036291 NAD(P)-binding domain superfamily CQ11_01945 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase CQ11_01955 IPR013785 Aldolase-type TIM barrel CQ11_01955 IPR027492 Dual-specificity RNA methyltransferase RlmN CQ11_01955 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr CQ11_01955 IPR007197 Radical SAM CQ11_01955 IPR040072 Methyltransferase (Class A) CQ11_01960 IPR000374 Phosphatidate cytidylyltransferase CQ11_01965 IPR023584 Ribosome recycling factor domain CQ11_01965 IPR002661 Ribosome recycling factor CQ11_01965 IPR036191 RRF superfamily CQ11_01970 IPR015963 Uridylate kinase, bacteria CQ11_01970 IPR001048 Aspartate/glutamate/uridylate kinase CQ11_01970 IPR036393 Acetylglutamate kinase-like superfamily CQ11_01970 IPR011817 Uridylate kinase CQ11_01980 IPR005829 Sugar transporter, conserved site CQ11_01980 IPR036259 MFS transporter superfamily CQ11_01980 IPR036390 Winged helix DNA-binding domain superfamily CQ11_01980 IPR020846 Major facilitator superfamily domain CQ11_01980 IPR011701 Major facilitator superfamily CQ11_01980 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG CQ11_01980 IPR036388 Winged helix-like DNA-binding domain superfamily CQ11_01990 IPR039651 Protein FixC-like CQ11_01990 IPR002938 FAD-binding domain CQ11_01990 IPR036188 FAD/NAD(P)-binding domain superfamily CQ11_01995 IPR001308 Electron transfer flavoprotein alpha subunit/FixB CQ11_01995 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal CQ11_01995 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site CQ11_01995 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal CQ11_01995 IPR029035 DHS-like NAD/FAD-binding domain superfamily CQ11_01995 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CQ11_02000 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CQ11_02000 IPR023463 Electron transfer flavoprotein, FixA subunit CQ11_02000 IPR033948 Electron transfer flavoprotein, beta subunit, N-terminal CQ11_02000 IPR012255 Electron transfer flavoprotein, beta subunit CQ11_02000 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal CQ11_02000 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site CQ11_02005 IPR001816 Translation elongation factor EFTs/EF1B CQ11_02005 IPR036402 Elongation factor Ts, dimerisation domain superfamily CQ11_02005 IPR018101 Translation elongation factor Ts, conserved site CQ11_02005 IPR009060 UBA-like superfamily CQ11_02005 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation CQ11_02010 IPR001865 Ribosomal protein S2 CQ11_02010 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid CQ11_02010 IPR018130 Ribosomal protein S2, conserved site CQ11_02010 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily CQ11_02015 IPR005115 Uncharacterised domain UPF0126 CQ11_02020 IPR016047 Peptidase M23 CQ11_02020 IPR011055 Duplicated hybrid motif CQ11_02025 IPR010998 Integrase/recombinase, N-terminal CQ11_02025 IPR004107 Integrase, SAM-like, N-terminal CQ11_02025 IPR023009 Tyrosine recombinase XerC/XerD CQ11_02025 IPR002104 Integrase, catalytic domain CQ11_02025 IPR013762 Integrase-like, catalytic domain superfamily CQ11_02025 IPR011010 DNA breaking-rejoining enzyme, catalytic core CQ11_02030 IPR041614 DprA, winged helix domain CQ11_02030 IPR003488 DNA recombination-mediator protein A CQ11_02035 IPR004482 Mg chelatase-related protein CQ11_02035 IPR003593 AAA+ ATPase domain CQ11_02035 IPR025158 Mg chelatase-related protein, C-terminal domain CQ11_02035 IPR000523 Magnesium chelatase ChlI domain CQ11_02035 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_02035 IPR020568 Ribosomal protein S5 domain 2-type fold CQ11_02035 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CQ11_02040 IPR011856 tRNA endonuclease-like domain superfamily CQ11_02040 IPR003509 Uncharacterised protein family UPF0102 CQ11_02040 IPR011335 Restriction endonuclease type II-like CQ11_02045 IPR019592 Protein of unknown function DUF2469 CQ11_02050 IPR012337 Ribonuclease H-like superfamily CQ11_02050 IPR022898 Ribonuclease HII CQ11_02050 IPR036397 Ribonuclease H superfamily CQ11_02050 IPR001352 Ribonuclease HII/HIII CQ11_02050 IPR024567 Ribonuclease HII/HIII domain CQ11_02055 IPR036286 LexA/Signal peptidase-like superfamily CQ11_02055 IPR000223 Peptidase S26A, signal peptidase I CQ11_02055 IPR019758 Peptidase S26A, signal peptidase I, conserved site CQ11_02055 IPR019756 Peptidase S26A, signal peptidase I, serine active site CQ11_02055 IPR019533 Peptidase S26 CQ11_02070 IPR038657 Ribosomal protein L19 superfamily CQ11_02070 IPR018257 Ribosomal protein L19, conserved site CQ11_02070 IPR008991 Translation protein SH3-like domain superfamily CQ11_02070 IPR001857 Ribosomal protein L19 CQ11_02075 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria CQ11_02075 IPR029028 Alpha/beta knot methyltransferases CQ11_02075 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain CQ11_02075 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal CQ11_02075 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CQ11_02080 IPR011033 PRC-barrel-like superfamily CQ11_02080 IPR027275 PRC-barrel domain CQ11_02080 IPR036976 RimM, N-terminal domain superfamily CQ11_02080 IPR011961 16S rRNA processing protein RimM CQ11_02080 IPR002676 RimM, N-terminal CQ11_02080 IPR009000 Translation protein, beta-barrel domain superfamily CQ11_02085 IPR020627 Uncharacterised protein family UPF0109 CQ11_02085 IPR009019 K homology domain superfamily, prokaryotic type CQ11_02085 IPR015946 K homology domain-like, alpha/beta CQ11_02090 IPR000307 Ribosomal protein S16 CQ11_02090 IPR020592 Ribosomal protein S16, conserved site CQ11_02090 IPR023803 Ribosomal protein S16 domain superfamily CQ11_02095 IPR002524 Cation efflux protein CQ11_02095 IPR027470 Cation efflux protein, cytoplasmic domain CQ11_02095 IPR027469 Cation efflux transmembrane domain superfamily CQ11_02095 IPR036837 Cation efflux protein, cytoplasmic domain superfamily CQ11_02105 IPR032466 Metal-dependent hydrolase CQ11_02105 IPR006680 Amidohydrolase-related CQ11_02110 IPR003593 AAA+ ATPase domain CQ11_02110 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily CQ11_02110 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_02110 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily CQ11_02110 IPR013822 Signal recognition particle SRP54, helical bundle CQ11_02110 IPR004125 Signal recognition particle, SRP54 subunit, M-domain CQ11_02110 IPR004780 Signal recognition particle protein CQ11_02110 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain CQ11_02110 IPR022941 Signal recognition particle, SRP54 subunit CQ11_02115 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_02115 IPR004390 Signal-recognition particle receptor FtsY CQ11_02115 IPR036225 SRP/SRP receptor, N-terminal CQ11_02115 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily CQ11_02115 IPR013822 Signal recognition particle SRP54, helical bundle CQ11_02115 IPR003593 AAA+ ATPase domain CQ11_02115 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain CQ11_02120 IPR001869 Thiol-activated cytolysin CQ11_02120 IPR038700 Thiol-activated cytolysin, C-terminal domain superfamily CQ11_02120 IPR035390 Thiol-activated cytolysin C-terminal CQ11_02120 IPR036359 Thiol-activated cytolysin superfamily CQ11_02120 IPR036363 Thiol-activated cytolysin, alpha-beta domain superfamily CQ11_02130 IPR024704 Structural maintenance of chromosomes protein CQ11_02130 IPR011890 Structural maintenance of chromosomes protein, prokaryotic CQ11_02130 IPR036277 SMCs flexible hinge superfamily CQ11_02130 IPR010935 SMCs flexible hinge CQ11_02130 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_02130 IPR003395 RecF/RecN/SMC, N-terminal CQ11_02135 IPR023005 Nucleoside diphosphate kinase, active site CQ11_02135 IPR036850 Nucleoside diphosphate kinase-like domain superfamily CQ11_02135 IPR001564 Nucleoside diphosphate kinase CQ11_02135 IPR034907 Nucleoside diphosphate kinase-like domain CQ11_02140 IPR013221 Mur ligase, central CQ11_02140 IPR001645 Folylpolyglutamate synthetase CQ11_02140 IPR018109 Folylpolyglutamate synthetase, conserved site CQ11_02140 IPR004101 Mur ligase, C-terminal CQ11_02140 IPR036565 Mur-like, catalytic domain superfamily CQ11_02140 IPR036615 Mur ligase, C-terminal domain superfamily CQ11_02145 IPR002301 Isoleucine-tRNA ligase CQ11_02145 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain CQ11_02145 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding CQ11_02145 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CQ11_02145 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CQ11_02145 IPR033709 Isoleucyl tRNA synthetase type 2, anticodon-binding domain CQ11_02145 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding CQ11_02145 IPR002300 Aminoacyl-tRNA synthetase, class Ia CQ11_02145 IPR023586 Isoleucine-tRNA ligase, type 2 CQ11_02160 IPR000304 Pyrroline-5-carboxylate reductase CQ11_02160 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain CQ11_02160 IPR036291 NAD(P)-binding domain superfamily CQ11_02160 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CQ11_02160 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal CQ11_02175 IPR000873 AMP-dependent synthetase/ligase CQ11_02175 IPR042099 AMP-dependent synthetase-like superfamily CQ11_02175 IPR020845 AMP-binding, conserved site CQ11_02180 IPR011277 Chorismate mutase, T-protein CQ11_02180 IPR036291 NAD(P)-binding domain superfamily CQ11_02180 IPR003099 Prephenate dehydrogenase CQ11_02180 IPR002701 Chorismate mutase II, prokaryotic-type CQ11_02180 IPR036263 Chorismate mutase type II superfamily CQ11_02180 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CQ11_02180 IPR036979 Chorismate mutase domain superfamily CQ11_02180 IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein CQ11_02185 IPR003593 AAA+ ATPase domain CQ11_02185 IPR038366 Zinc finger, ClpX C4-type superfamily CQ11_02185 IPR010603 Zinc finger, ClpX C4-type CQ11_02185 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_02185 IPR004487 Clp protease, ATP-binding subunit ClpX CQ11_02185 IPR019489 Clp ATPase, C-terminal CQ11_02185 IPR003959 ATPase, AAA-type, core CQ11_02190 IPR001907 ATP-dependent Clp protease proteolytic subunit CQ11_02190 IPR029045 ClpP/crotonase-like domain superfamily CQ11_02190 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA CQ11_02190 IPR018215 ClpP, Ser active site CQ11_02190 IPR033135 ClpP, histidine active site CQ11_02195 IPR001907 ATP-dependent Clp protease proteolytic subunit CQ11_02195 IPR029045 ClpP/crotonase-like domain superfamily CQ11_02195 IPR033135 ClpP, histidine active site CQ11_02195 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA CQ11_02200 IPR005215 Trigger factor CQ11_02200 IPR027304 Trigger factor/SurA domain superfamily CQ11_02200 IPR036611 Trigger factor ribosome-binding domain superfamily CQ11_02200 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain CQ11_02200 IPR008881 Trigger factor, ribosome-binding, bacterial CQ11_02200 IPR037041 Trigger factor, C-terminal domain superfamily CQ11_02200 IPR008880 Trigger factor, C-terminal CQ11_02205 IPR023210 NADP-dependent oxidoreductase domain CQ11_02205 IPR036812 NADP-dependent oxidoreductase domain superfamily CQ11_02215 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily CQ11_02215 IPR019800 Glycoside hydrolase, family 3, active site CQ11_02215 IPR017853 Glycoside hydrolase superfamily CQ11_02215 IPR001764 Glycoside hydrolase, family 3, N-terminal CQ11_02215 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily CQ11_02220 IPR001927 Sodium:galactoside symporter CQ11_02220 IPR039672 Lactose permease-like CQ11_02220 IPR018043 Sodium:galactoside symporter, conserved site CQ11_02220 IPR036259 MFS transporter superfamily CQ11_02225 IPR017853 Glycoside hydrolase superfamily CQ11_02225 IPR006104 Glycosyl hydrolases family 2, sugar binding domain CQ11_02225 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily CQ11_02225 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich CQ11_02225 IPR023230 Glycoside hydrolase, family 2, conserved site CQ11_02225 IPR006103 Glycoside hydrolase family 2, catalytic domain CQ11_02225 IPR023232 Glycoside hydrolase, family 2, active site CQ11_02225 IPR006101 Glycoside hydrolase, family 2 CQ11_02225 IPR008979 Galactose-binding-like domain superfamily CQ11_02225 IPR013783 Immunoglobulin-like fold CQ11_02230 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CQ11_02230 IPR000843 LacI-type HTH domain CQ11_02230 IPR028082 Periplasmic binding protein-like I CQ11_02230 IPR006377 Catabolite control protein A CQ11_02260 IPR036188 FAD/NAD(P)-binding domain superfamily CQ11_02260 IPR023753 FAD/NAD(P)-binding domain CQ11_02260 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily CQ11_02260 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I CQ11_02260 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CQ11_02260 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site CQ11_02270 IPR002677 Ribosomal protein L32p CQ11_02270 IPR011332 Zinc-binding ribosomal protein CQ11_02275 IPR020568 Ribosomal protein S5 domain 2-type fold CQ11_02275 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal CQ11_02275 IPR036956 Impact, N-terminal domain superfamily CQ11_02275 IPR001498 Impact, N-terminal CQ11_02275 IPR015796 Impact family, bacterial/archaeal CQ11_02275 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site CQ11_02275 IPR035647 EF-G domain III/V-like CQ11_02275 IPR023582 Impact family CQ11_02280 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CQ11_02280 IPR005856 Cysteine synthase CQ11_02280 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site CQ11_02280 IPR005859 Cysteine synthase CysK CQ11_02280 IPR001926 Pyridoxal-phosphate dependent enzyme CQ11_02285 IPR011004 Trimeric LpxA-like superfamily CQ11_02285 IPR005881 Serine O-acetyltransferase CQ11_02285 IPR042122 Serine acetyltransferase, N-terminal domain superfamily CQ11_02285 IPR018357 Hexapeptide transferase, conserved site CQ11_02285 IPR001451 Hexapeptide repeat CQ11_02290 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily CQ11_02290 IPR011860 Ribose 5-phosphate isomerase B, Actinobacteria-type CQ11_02290 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family CQ11_02295 IPR008753 Peptidase M13, N-terminal domain CQ11_02295 IPR018497 Peptidase M13, C-terminal domain CQ11_02295 IPR000718 Peptidase M13 CQ11_02295 IPR024079 Metallopeptidase, catalytic domain superfamily CQ11_02295 IPR042089 Peptidase M13, domain 2 CQ11_02300 IPR008526 Inner membrane protein YedI CQ11_02305 IPR042097 Aminopeptidase N-like , N-terminal CQ11_02305 IPR012778 Peptidase M1, aminopeptidase CQ11_02305 IPR024571 ERAP1-like C-terminal domain CQ11_02305 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase CQ11_02305 IPR014782 Peptidase M1, membrane alanine aminopeptidase CQ11_02310 IPR016181 Acyl-CoA N-acyltransferase CQ11_02310 IPR005019 Methyladenine glycosylase CQ11_02310 IPR001674 GMP synthase, C-terminal CQ11_02310 IPR029062 Class I glutamine amidotransferase-like CQ11_02310 IPR000182 GNAT domain CQ11_02310 IPR025777 GMP synthetase ATP pyrophosphatase domain CQ11_02310 IPR011257 DNA glycosylase CQ11_02310 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CQ11_02310 IPR017926 Glutamine amidotransferase CQ11_02320 IPR017853 Glycoside hydrolase superfamily CQ11_02320 IPR003385 Glycoside hydrolase, family 77 CQ11_02325 IPR003703 Acyl-CoA thioesterase CQ11_02325 IPR029069 HotDog domain superfamily CQ11_02330 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_02330 IPR032781 ABC-transporter extension domain CQ11_02330 IPR003439 ABC transporter-like CQ11_02330 IPR017871 ABC transporter, conserved site CQ11_02330 IPR003593 AAA+ ATPase domain CQ11_02330 IPR022374 Energy-dependent translational throttle protein EttA CQ11_02355 IPR013520 Exonuclease, RNase T/DNA polymerase III CQ11_02355 IPR022894 Oligoribonuclease CQ11_02355 IPR012337 Ribonuclease H-like superfamily CQ11_02355 IPR036397 Ribonuclease H superfamily CQ11_02365 IPR011761 ATP-grasp fold CQ11_02375 IPR029044 Nucleotide-diphospho-sugar transferases CQ11_02375 IPR001173 Glycosyltransferase 2-like CQ11_02385 IPR001173 Glycosyltransferase 2-like CQ11_02385 IPR029044 Nucleotide-diphospho-sugar transferases CQ11_02400 IPR022857 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase CQ11_02400 IPR001173 Glycosyltransferase 2-like CQ11_02400 IPR029044 Nucleotide-diphospho-sugar transferases CQ11_02415 IPR001173 Glycosyltransferase 2-like CQ11_02415 IPR002495 Glycosyl transferase, family 8 CQ11_02415 IPR029044 Nucleotide-diphospho-sugar transferases CQ11_02420 IPR007074 LicD family CQ11_02425 IPR025877 MobA-like NTP transferase CQ11_02425 IPR017189 CTP:phosphocholine cytidylyltransferase CQ11_02425 IPR029044 Nucleotide-diphospho-sugar transferases CQ11_02430 IPR001296 Glycosyl transferase, family 1 CQ11_02430 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain CQ11_02430 IPR017814 Mycothiol biosynthesis protein, MshA CQ11_02440 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_02440 IPR014001 Helicase superfamily 1/2, ATP-binding domain CQ11_02440 IPR011545 DEAD/DEAH box helicase domain CQ11_02440 IPR001650 Helicase, C-terminal CQ11_02440 IPR012961 ATP-dependent RNA helicase Ski2, C-terminal CQ11_02445 IPR029066 PLP-binding barrel CQ11_02445 IPR011078 Pyridoxal phosphate homeostasis protein CQ11_02445 IPR001608 Alanine racemase, N-terminal CQ11_02450 IPR013785 Aldolase-type TIM barrel CQ11_02450 IPR034457 Organic radical-activating enzymes CQ11_02450 IPR012838 Pyruvate formate-lyase 1 activating enzyme CQ11_02450 IPR034465 Pyruvate formate-lyase activase CQ11_02450 IPR001989 Radical-activating enzyme, conserved site CQ11_02450 IPR007197 Radical SAM CQ11_02455 IPR005949 Formate acetyltransferase CQ11_02455 IPR001150 Glycine radical domain CQ11_02455 IPR004184 Pyruvate formate lyase domain CQ11_02455 IPR019777 Formate C-acetyltransferase glycine radical, conserved site CQ11_02460 IPR005949 Formate acetyltransferase CQ11_02460 IPR004184 Pyruvate formate lyase domain CQ11_02460 IPR001150 Glycine radical domain CQ11_02460 IPR019777 Formate C-acetyltransferase glycine radical, conserved site CQ11_02465 IPR005786 Branched-chain amino acid aminotransferase II CQ11_02465 IPR036038 Aminotransferase-like, PLP-dependent enzymes CQ11_02465 IPR018300 Aminotransferase, class IV, conserved site CQ11_02465 IPR001544 Aminotransferase class IV CQ11_02465 IPR033939 Branched-chain aminotransferase CQ11_02480 IPR004708 Aspartate ammonia-lyase CQ11_02480 IPR008948 L-Aspartase-like CQ11_02480 IPR024083 Fumarase/histidase, N-terminal CQ11_02480 IPR022761 Fumarate lyase, N-terminal CQ11_02480 IPR000362 Fumarate lyase family CQ11_02480 IPR020557 Fumarate lyase, conserved site CQ11_02480 IPR018951 Fumarase C, C-terminal CQ11_02490 IPR036291 NAD(P)-binding domain superfamily CQ11_02490 IPR014359 Ketol-acid reductoisomerase, prokaryotic CQ11_02490 IPR013116 Ketol-acid reductoisomerase, N-terminal CQ11_02490 IPR000506 Ketol-acid reductoisomerase, C-terminal CQ11_02490 IPR013023 Ketol-acid reductoisomerase CQ11_02490 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CQ11_02495 IPR002912 ACT domain CQ11_02495 IPR019455 Acetolactate synthase, small subunit, C-terminal CQ11_02495 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal CQ11_02495 IPR004789 Acetolactate synthase, small subunit CQ11_02495 IPR039557 AHAS, ACT domain CQ11_02500 IPR029035 DHS-like NAD/FAD-binding domain superfamily CQ11_02500 IPR012846 Acetolactate synthase, large subunit, biosynthetic CQ11_02500 IPR039368 Acetolactate synthase large subunit, TPP binding domain CQ11_02500 IPR012000 Thiamine pyrophosphate enzyme, central domain CQ11_02500 IPR029061 Thiamin diphosphate-binding fold CQ11_02500 IPR000399 TPP-binding enzyme, conserved site CQ11_02500 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding CQ11_02500 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain CQ11_02505 IPR006037 Regulator of K+ conductance, C-terminal CQ11_02505 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily CQ11_02505 IPR006512 YidE/YbjL duplication CQ11_02510 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase CQ11_02510 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site CQ11_02510 IPR037237 IlvD/EDD, N-terminal domain CQ11_02510 IPR042096 Dihydroxy-acid dehydratase, C-terminal CQ11_02510 IPR004404 Dihydroxy-acid dehydratase CQ11_02515 IPR013216 Methyltransferase type 11 CQ11_02515 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CQ11_02540 IPR001626 ABC transporter, TroCD-like CQ11_02540 IPR037294 ABC transporter, BtuC-like CQ11_02545 IPR001626 ABC transporter, TroCD-like CQ11_02545 IPR037294 ABC transporter, BtuC-like CQ11_02550 IPR017871 ABC transporter, conserved site CQ11_02550 IPR003439 ABC transporter-like CQ11_02550 IPR003593 AAA+ ATPase domain CQ11_02550 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_02555 IPR006127 Periplasmic solute binding protein, ZnuA-like CQ11_02555 IPR006128 Adhesion lipoprotein CQ11_02555 IPR006129 Adhesin B CQ11_02560 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CQ11_02560 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CQ11_02560 IPR002305 Aminoacyl-tRNA synthetase, class Ic CQ11_02560 IPR002942 RNA-binding S4 domain CQ11_02560 IPR036986 RNA-binding S4 domain superfamily CQ11_02560 IPR002307 Tyrosine-tRNA ligase CQ11_02560 IPR024088 Tyrosine-tRNA ligase, bacterial-type CQ11_02560 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 CQ11_02565 IPR003439 ABC transporter-like CQ11_02565 IPR017871 ABC transporter, conserved site CQ11_02565 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_02565 IPR003593 AAA+ ATPase domain CQ11_02575 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CQ11_02575 IPR001387 Cro/C1-type helix-turn-helix domain CQ11_02585 IPR005886 UDP-glucose 4-epimerase CQ11_02585 IPR036291 NAD(P)-binding domain superfamily CQ11_02585 IPR016040 NAD(P)-binding domain CQ11_02590 IPR020899 Arginine repressor, C-terminal CQ11_02590 IPR036251 Arginine repressor, C-terminal domain superfamily CQ11_02590 IPR020900 Arginine repressor, DNA-binding domain CQ11_02590 IPR036390 Winged helix DNA-binding domain superfamily CQ11_02590 IPR036388 Winged helix-like DNA-binding domain superfamily CQ11_02590 IPR001669 Arginine repressor CQ11_02595 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CQ11_02595 IPR015424 Pyridoxal phosphate-dependent transferase CQ11_02595 IPR004636 Acetylornithine/Succinylornithine transaminase family CQ11_02595 IPR005814 Aminotransferase class-III CQ11_02595 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CQ11_02605 IPR036291 NAD(P)-binding domain superfamily CQ11_02605 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CQ11_02605 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal CQ11_02605 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal CQ11_02605 IPR013328 6-phosphogluconate dehydrogenase, domain 2 CQ11_02605 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent CQ11_02610 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain CQ11_02610 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily CQ11_02610 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC CQ11_02615 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily CQ11_02615 IPR009061 Putative DNA-binding domain superfamily CQ11_02615 IPR005146 B3/B4 tRNA-binding domain CQ11_02615 IPR012340 Nucleic acid-binding, OB-fold CQ11_02615 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 CQ11_02615 IPR005147 tRNA synthetase, B5-domain CQ11_02615 IPR033714 Phenylalanly tRNA synthetase, tRNA-binding-domain CQ11_02615 IPR002547 tRNA-binding domain CQ11_02615 IPR041616 Phenylalanyl tRNA synthetase beta chain, core domain CQ11_02615 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit CQ11_02615 IPR005121 Ferrodoxin-fold anticodon-binding domain CQ11_02620 IPR002319 Phenylalanyl-tRNA synthetase CQ11_02620 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm CQ11_02620 IPR006195 Aminoacyl-tRNA synthetase, class II CQ11_02620 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit CQ11_02620 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal CQ11_02620 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial CQ11_02625 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal CQ11_02625 IPR023663 NADPH dehydrogenase CQ11_02625 IPR013785 Aldolase-type TIM barrel CQ11_02630 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CQ11_02630 IPR013123 RNA 2-O ribose methyltransferase, substrate binding CQ11_02630 IPR029028 Alpha/beta knot methyltransferases CQ11_02630 IPR029064 50S ribosomal protein L30e-like CQ11_02630 IPR001537 tRNA/rRNA methyltransferase, SpoU type CQ11_02640 IPR035566 Ribosomal protein L20, C-terminal CQ11_02640 IPR005813 Ribosomal protein L20 CQ11_02645 IPR018265 Ribosomal protein L35, conserved site CQ11_02645 IPR021137 Ribosomal protein L35 CQ11_02645 IPR001706 Ribosomal protein L35, non-mitochondrial CQ11_02645 IPR037229 Ribosomal protein L35 superfamily CQ11_02650 IPR019814 Translation initiation factor 3, N-terminal CQ11_02650 IPR019815 Translation initiation factor 3, C-terminal CQ11_02650 IPR001288 Translation initiation factor 3 CQ11_02650 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily CQ11_02650 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily CQ11_02660 IPR006062 Histidine biosynthesis CQ11_02660 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase CQ11_02660 IPR011060 Ribulose-phosphate binding barrel CQ11_02660 IPR013785 Aldolase-type TIM barrel CQ11_02660 IPR010188 Bifunctional HisA/TrpF CQ11_02665 IPR029062 Class I glutamine amidotransferase-like CQ11_02665 IPR017926 Glutamine amidotransferase CQ11_02665 IPR010139 Imidazole glycerol phosphate synthase, subunit H CQ11_02675 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily CQ11_02675 IPR000807 Imidazoleglycerol-phosphate dehydratase CQ11_02675 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site CQ11_02675 IPR020568 Ribosomal protein S5 domain 2-type fold CQ11_02680 IPR004839 Aminotransferase, class I/classII CQ11_02680 IPR005861 Histidinol-phosphate aminotransferase family CQ11_02680 IPR015424 Pyridoxal phosphate-dependent transferase CQ11_02680 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CQ11_02680 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CQ11_02685 IPR012131 Histidinol dehydrogenase CQ11_02685 IPR022695 Histidinol dehydrogenase, monofunctional CQ11_02685 IPR001692 Histidinol dehydrogenase, conserved site CQ11_02685 IPR016161 Aldehyde/histidinol dehydrogenase CQ11_02690 IPR036424 Decaprenyl diphosphate synthase-like superfamily CQ11_02690 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site CQ11_02690 IPR001441 Decaprenyl diphosphate synthase-like CQ11_02695 IPR037278 ARFGAP/RecO-like zinc finger CQ11_02695 IPR022572 DNA replication/recombination mediator RecO, N-terminal CQ11_02695 IPR012340 Nucleic acid-binding, OB-fold CQ11_02695 IPR003717 Recombination protein O, RecO CQ11_02700 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain CQ11_02700 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site CQ11_02700 IPR013785 Aldolase-type TIM barrel CQ11_02700 IPR005668 2-isopropylmalate synthase CQ11_02700 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily CQ11_02700 IPR000891 Pyruvate carboxyltransferase CQ11_02700 IPR039371 LeuA, N-terminal catalytic TIM barrel domain CQ11_02705 IPR016236 Serine/threonine-protein kinase PknK, predicted CQ11_02705 IPR017441 Protein kinase, ATP binding site CQ11_02705 IPR000719 Protein kinase domain CQ11_02705 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_02705 IPR011009 Protein kinase-like domain superfamily CQ11_02705 IPR041664 Orc1-like, AAA ATPase domain CQ11_02705 IPR011990 Tetratricopeptide-like helical domain superfamily CQ11_02715 IPR001932 PPM-type phosphatase domain CQ11_02715 IPR036457 PPM-type phosphatase domain superfamily CQ11_02715 IPR015655 Protein phosphatase 2C family CQ11_02725 IPR015946 K homology domain-like, alpha/beta CQ11_02725 IPR030388 Era-type guanine nucleotide-binding (G) domain CQ11_02725 IPR005662 GTP-binding protein Era CQ11_02725 IPR004044 K Homology domain, type 2 CQ11_02725 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_02725 IPR005225 Small GTP-binding protein domain CQ11_02725 IPR006073 GTP binding domain CQ11_02725 IPR009019 K homology domain superfamily, prokaryotic type CQ11_02730 IPR016169 FAD-binding, type PCMH, subdomain 2 CQ11_02730 IPR005170 Transporter-associated domain CQ11_02730 IPR002550 CNNM, transmembrane domain CQ11_02730 IPR000644 CBS domain CQ11_02730 IPR036318 FAD-binding, type PCMH-like superfamily CQ11_02735 IPR023091 Metalloprotease catalytic domain superfamily, predicted CQ11_02735 IPR020549 Endoribonuclease YbeY, conserved site CQ11_02735 IPR002036 Endoribonuclease YbeY CQ11_02740 IPR004087 K Homology domain CQ11_02740 IPR003714 PhoH-like protein CQ11_02740 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_02740 IPR036612 K Homology domain, type 1 superfamily CQ11_02745 IPR006700 Ribosomal RNA small subunit methyltransferase E CQ11_02745 IPR029028 Alpha/beta knot methyltransferases CQ11_02745 IPR015947 PUA-like superfamily CQ11_02745 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CQ11_02750 IPR001623 DnaJ domain CQ11_02750 IPR002939 Chaperone DnaJ, C-terminal CQ11_02750 IPR018253 DnaJ domain, conserved site CQ11_02750 IPR008971 HSP40/DnaJ peptide-binding CQ11_02750 IPR001305 Heat shock protein DnaJ, cysteine-rich domain CQ11_02750 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily CQ11_02750 IPR036869 Chaperone J-domain superfamily CQ11_02750 IPR012724 Chaperone DnaJ CQ11_02755 IPR001034 DeoR-type HTH domain CQ11_02755 IPR029016 GAF-like domain superfamily CQ11_02755 IPR002571 Heat-inducible transcription repressor HrcA CQ11_02755 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal CQ11_02755 IPR036388 Winged helix-like DNA-binding domain superfamily CQ11_02755 IPR036390 Winged helix DNA-binding domain superfamily CQ11_02755 IPR023120 Winged helix-turn-helix transcription repressor, HrcA, inserted dimerising domain superfamily CQ11_02770 IPR004559 Heme chaperone HemW-like CQ11_02770 IPR023404 Radical SAM, alpha/beta horseshoe CQ11_02770 IPR034505 Anaerobic coproporphyrinogen-III oxidase CQ11_02770 IPR006638 Elp3/MiaB/NifB CQ11_02770 IPR007197 Radical SAM CQ11_02775 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type CQ11_02775 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CQ11_02780 IPR006297 Elongation factor 4 CQ11_02780 IPR035647 EF-G domain III/V-like CQ11_02780 IPR000640 Elongation factor EFG, domain V-like CQ11_02780 IPR038363 LepA, C-terminal domain superfamily CQ11_02780 IPR013842 GTP-binding protein LepA, C-terminal CQ11_02780 IPR035654 Elongation factor 4, domain IV CQ11_02780 IPR031157 Tr-type G domain, conserved site CQ11_02780 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_02780 IPR005225 Small GTP-binding protein domain CQ11_02780 IPR000795 Transcription factor, GTP-binding domain CQ11_02780 IPR009000 Translation protein, beta-barrel domain superfamily CQ11_02805 IPR036510 Ribosomal protein S20 superfamily CQ11_02805 IPR002583 Ribosomal protein S20 CQ11_02810 IPR034300 NADP transhydrogenase beta-like domain CQ11_02810 IPR012136 NADP transhydrogenase, beta subunit CQ11_02810 IPR029035 DHS-like NAD/FAD-binding domain superfamily CQ11_02815 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal CQ11_02815 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain CQ11_02815 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 CQ11_02815 IPR036291 NAD(P)-binding domain superfamily CQ11_02815 IPR026255 NAD(P) transhydrogenase, alpha subunit CQ11_02815 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal CQ11_02815 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 CQ11_02835 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_02835 IPR033186 Helicase HerA-like C-terminal CQ11_02850 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CQ11_02850 IPR002302 Leucine-tRNA ligase CQ11_02850 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain CQ11_02850 IPR025709 Leucyl-tRNA synthetase, editing domain CQ11_02850 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding CQ11_02850 IPR015413 Methionyl/Leucyl tRNA synthetase CQ11_02850 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CQ11_02850 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding CQ11_02855 IPR011146 HIT-like domain CQ11_02855 IPR019808 Histidine triad, conserved site CQ11_02855 IPR001310 Histidine triad (HIT) protein CQ11_02855 IPR036265 HIT-like superfamily CQ11_02870 IPR002549 Transmembrane protein TqsA-like CQ11_02875 IPR035994 Nucleoside phosphorylase superfamily CQ11_02875 IPR000845 Nucleoside phosphorylase domain CQ11_02875 IPR004402 Purine nucleoside phosphorylase DeoD-type CQ11_02875 IPR018016 Nucleoside phosphorylase, conserved site CQ11_02880 IPR037294 ABC transporter, BtuC-like CQ11_02880 IPR036388 Winged helix-like DNA-binding domain superfamily CQ11_02880 IPR001626 ABC transporter, TroCD-like CQ11_02880 IPR001367 Iron dependent repressor, metal binding and dimerisation domain CQ11_02880 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily CQ11_02880 IPR022689 Iron dependent repressor CQ11_02885 IPR001267 Thymidine kinase CQ11_02885 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_02895 IPR011991 ArsR-like helix-turn-helix domain CQ11_02895 IPR036390 Winged helix DNA-binding domain superfamily CQ11_02895 IPR036388 Winged helix-like DNA-binding domain superfamily CQ11_02895 IPR001845 HTH ArsR-type DNA-binding domain CQ11_02905 IPR006127 Periplasmic solute binding protein, ZnuA-like CQ11_02905 IPR006128 Adhesion lipoprotein CQ11_02905 IPR006129 Adhesin B CQ11_02915 IPR003593 AAA+ ATPase domain CQ11_02915 IPR003439 ABC transporter-like CQ11_02915 IPR017871 ABC transporter, conserved site CQ11_02915 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_02920 IPR037294 ABC transporter, BtuC-like CQ11_02920 IPR001626 ABC transporter, TroCD-like CQ11_02925 IPR011611 Carbohydrate kinase PfkB CQ11_02925 IPR029056 Ribokinase-like CQ11_02925 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site CQ11_02940 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CQ11_02940 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily CQ11_02960 IPR004840 Amino acid permease, conserved site CQ11_02960 IPR004841 Amino acid permease/ SLC12A domain CQ11_02965 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily CQ11_02965 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain CQ11_02965 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain CQ11_02965 IPR020557 Fumarate lyase, conserved site CQ11_02965 IPR011167 Iron-dependent fumarate hydratase CQ11_02970 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal CQ11_02970 IPR003593 AAA+ ATPase domain CQ11_02970 IPR026253 Methionine import ATP-binding protein MetN CQ11_02970 IPR003439 ABC transporter-like CQ11_02970 IPR017871 ABC transporter, conserved site CQ11_02970 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_02970 IPR018449 NIL domain CQ11_02970 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain CQ11_02980 IPR004872 Lipoprotein NlpA family CQ11_02985 IPR004841 Amino acid permease/ SLC12A domain CQ11_02985 IPR004840 Amino acid permease, conserved site CQ11_02995 IPR011606 Branched-chain amino acid transport, permease CQ11_02995 IPR004471 Branched-chain amino acid transport, AzlC CQ11_03000 IPR036390 Winged helix DNA-binding domain superfamily CQ11_03000 IPR036388 Winged helix-like DNA-binding domain superfamily CQ11_03000 IPR000524 Transcription regulator HTH, GntR CQ11_03000 IPR011711 GntR, C-terminal CQ11_03000 IPR008920 Transcription regulator FadR/GntR, C-terminal CQ11_03005 IPR011701 Major facilitator superfamily CQ11_03005 IPR036259 MFS transporter superfamily CQ11_03005 IPR020846 Major facilitator superfamily domain CQ11_03010 IPR036452 Ribonucleoside hydrolase-like CQ11_03010 IPR022977 Pyrimidine-specific ribonucleoside hydrolase RihB CQ11_03010 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain CQ11_03010 IPR023186 Inosine/uridine-preferring nucleoside hydrolase CQ11_03025 IPR029062 Class I glutamine amidotransferase-like CQ11_03025 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO CQ11_03025 IPR021196 PdxT/SNO family, conserved site CQ11_03030 IPR013785 Aldolase-type TIM barrel CQ11_03030 IPR011060 Ribulose-phosphate binding barrel CQ11_03030 IPR033755 PdxS/SNZ N-terminal domain CQ11_03030 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ CQ11_03035 IPR015424 Pyridoxal phosphate-dependent transferase CQ11_03035 IPR036388 Winged helix-like DNA-binding domain superfamily CQ11_03035 IPR000524 Transcription regulator HTH, GntR CQ11_03035 IPR036390 Winged helix DNA-binding domain superfamily CQ11_03035 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CQ11_03080 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel CQ11_03080 IPR002509 NodB homology domain CQ11_03085 IPR001926 Pyridoxal-phosphate dependent enzyme CQ11_03085 IPR006653 Tryptophan synthase, beta chain, conserved site CQ11_03085 IPR006654 Tryptophan synthase, beta chain CQ11_03085 IPR023026 Tryptophan synthase beta chain/beta chain-like CQ11_03085 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CQ11_03090 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CQ11_03090 IPR028082 Periplasmic binding protein-like I CQ11_03090 IPR000843 LacI-type HTH domain CQ11_03095 IPR023750 RbsD-like superfamily CQ11_03095 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU CQ11_03095 IPR023751 L-fucose mutarotase CQ11_03100 IPR036259 MFS transporter superfamily CQ11_03100 IPR005275 L-fucose permease FucP CQ11_03100 IPR011701 Major facilitator superfamily CQ11_03105 IPR036409 Class II aldolase/adducin N-terminal domain superfamily CQ11_03105 IPR001303 Class II aldolase/adducin N-terminal CQ11_03115 IPR038392 L-fucose isomerase, domain 2 superfamily CQ11_03115 IPR005763 L-fucose isomerase CQ11_03115 IPR038391 L-fucose isomerase, domain 1 superfamily CQ11_03115 IPR012888 L-fucose isomerase, N-terminal-1 CQ11_03115 IPR015888 L-fucose isomerase, C-terminal CQ11_03115 IPR038393 L-fucose isomerase, domain 3 superfamily CQ11_03115 IPR004216 L-fucose/L-arabinose isomerase, C-terminal CQ11_03115 IPR012889 L-fucose isomerase, N-terminal-2 CQ11_03115 IPR009015 L-fucose isomerase, N-terminal/central domain superfamily CQ11_03140 IPR006120 Resolvase, HTH domain CQ11_03140 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily CQ11_03140 IPR006119 Resolvase, N-terminal catalytic domain CQ11_03140 IPR006118 Recombinase, conserved site CQ11_03140 IPR009057 Homeobox-like domain superfamily CQ11_03165 IPR006480 Bacteriophage holin family CQ11_03250 IPR001907 ATP-dependent Clp protease proteolytic subunit CQ11_03250 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA CQ11_03250 IPR033135 ClpP, histidine active site CQ11_03250 IPR029045 ClpP/crotonase-like domain superfamily CQ11_03255 IPR006944 Bacteriophage/Gene transfer agent portal protein CQ11_03290 IPR002941 DNA methylase N-4/N-6 CQ11_03290 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CQ11_03290 IPR001091 Restriction/modification DNA-methylase CQ11_03290 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CQ11_03350 IPR018876 Bacteriophage P22, antirepressor protein, C-terminal CQ11_03350 IPR003497 BRO N-terminal domain CQ11_03375 IPR001098 DNA-directed DNA polymerase, family A, palm domain CQ11_03375 IPR002562 3'-5' exonuclease domain CQ11_03375 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal CQ11_03375 IPR002421 5'-3' exonuclease, N-terminal CQ11_03375 IPR036279 5'-3' exonuclease, C-terminal domain superfamily CQ11_03375 IPR019760 DNA-directed DNA polymerase, family A, conserved site CQ11_03375 IPR020045 DNA polymerase I-like, H3TH domain CQ11_03375 IPR018320 DNA polymerase 1 CQ11_03375 IPR002298 DNA polymerase A CQ11_03375 IPR029060 PIN-like domain superfamily CQ11_03375 IPR008918 Helix-hairpin-helix motif, class 2 CQ11_03375 IPR012337 Ribonuclease H-like superfamily CQ11_03375 IPR036397 Ribonuclease H superfamily CQ11_03425 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_03425 IPR026866 Protein CR006, P-loop domain CQ11_03435 IPR001650 Helicase, C-terminal CQ11_03435 IPR014001 Helicase superfamily 1/2, ATP-binding domain CQ11_03435 IPR006935 Helicase/UvrB, N-terminal CQ11_03435 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_03435 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal CQ11_03435 IPR013670 EcoEI R protein C-terminal domain CQ11_03440 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily CQ11_03440 IPR003356 DNA methylase, adenine-specific CQ11_03440 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CQ11_03440 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CQ11_03445 IPR000055 Restriction endonuclease, type I, HsdS CQ11_03460 IPR013078 Histidine phosphatase superfamily, clade-1 CQ11_03460 IPR029033 Histidine phosphatase superfamily CQ11_03465 IPR004394 Protein Iojap/ribosomal silencing factor RsfS CQ11_03475 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CQ11_03475 IPR004821 Cytidyltransferase-like domain CQ11_03475 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase CQ11_03480 IPR017937 Thioredoxin, conserved site CQ11_03480 IPR013766 Thioredoxin domain CQ11_03480 IPR005746 Thioredoxin CQ11_03480 IPR036249 Thioredoxin-like superfamily CQ11_03495 IPR006169 GTP1/OBG domain CQ11_03495 IPR036726 GTP1/OBG domain superfamily CQ11_03495 IPR006073 GTP binding domain CQ11_03495 IPR036346 GTP-binding protein OBG, C-terminal domain superfamily CQ11_03495 IPR014100 GTP-binding protein Obg/CgtA CQ11_03495 IPR031167 OBG-type guanine nucleotide-binding (G) domain CQ11_03495 IPR006074 GTP1/OBG, conserved site CQ11_03495 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_03495 IPR015349 GTP-binding protein OBG, C-terminal CQ11_03500 IPR018261 Ribosomal protein L27, conserved site CQ11_03500 IPR001684 Ribosomal protein L27 CQ11_03505 IPR036164 L21-like superfamily CQ11_03505 IPR018258 Ribosomal protein L21, conserved site CQ11_03505 IPR001787 Ribosomal protein L21 CQ11_03505 IPR028909 Ribosomal protein L21-like CQ11_03510 IPR003029 S1 domain CQ11_03510 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G CQ11_03510 IPR004659 Ribonuclease E/G CQ11_03510 IPR012340 Nucleic acid-binding, OB-fold CQ11_03510 IPR022967 RNA-binding domain, S1 CQ11_03515 IPR002585 Cytochrome ubiquinol oxidase subunit 1 CQ11_03520 IPR003317 Cytochrome ubiquinol oxidase subunit 2 CQ11_03525 IPR036640 ABC transporter type 1, transmembrane domain superfamily CQ11_03525 IPR011527 ABC transporter type 1, transmembrane domain CQ11_03525 IPR003593 AAA+ ATPase domain CQ11_03525 IPR003439 ABC transporter-like CQ11_03525 IPR017871 ABC transporter, conserved site CQ11_03525 IPR039421 Type I protein exporter CQ11_03525 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_03525 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD CQ11_03530 IPR003439 ABC transporter-like CQ11_03530 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_03530 IPR017871 ABC transporter, conserved site CQ11_03530 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC CQ11_03530 IPR003593 AAA+ ATPase domain CQ11_03530 IPR011527 ABC transporter type 1, transmembrane domain CQ11_03530 IPR036640 ABC transporter type 1, transmembrane domain superfamily CQ11_03535 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain CQ11_03535 IPR003594 Histidine kinase/HSP90-like ATPase CQ11_03535 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CQ11_03535 IPR005467 Histidine kinase domain CQ11_03535 IPR003018 GAF domain CQ11_03535 IPR029016 GAF-like domain superfamily CQ11_03540 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_03540 IPR036640 ABC transporter type 1, transmembrane domain superfamily CQ11_03540 IPR003439 ABC transporter-like CQ11_03540 IPR017871 ABC transporter, conserved site CQ11_03540 IPR011917 ABC transporter, lipid A export, MsbA CQ11_03540 IPR011527 ABC transporter type 1, transmembrane domain CQ11_03540 IPR003593 AAA+ ATPase domain CQ11_03545 IPR039421 Type I protein exporter CQ11_03545 IPR017871 ABC transporter, conserved site CQ11_03545 IPR003439 ABC transporter-like CQ11_03545 IPR036640 ABC transporter type 1, transmembrane domain superfamily CQ11_03545 IPR011527 ABC transporter type 1, transmembrane domain CQ11_03545 IPR003593 AAA+ ATPase domain CQ11_03545 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_03550 IPR036249 Thioredoxin-like superfamily CQ11_03550 IPR017559 Alkyl hydroperoxide reductase subunit C CQ11_03550 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant CQ11_03550 IPR024706 Peroxiredoxin, AhpC-type CQ11_03550 IPR019479 Peroxiredoxin, C-terminal CQ11_03550 IPR013766 Thioredoxin domain CQ11_03555 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site CQ11_03555 IPR002109 Glutaredoxin CQ11_03555 IPR036188 FAD/NAD(P)-binding domain superfamily CQ11_03555 IPR023753 FAD/NAD(P)-binding domain CQ11_03555 IPR012081 Alkyl hydroperoxide reductase subunit F CQ11_03555 IPR012336 Thioredoxin-like fold CQ11_03555 IPR036249 Thioredoxin-like superfamily CQ11_03560 IPR001789 Signal transduction response regulator, receiver domain CQ11_03560 IPR000792 Transcription regulator LuxR, C-terminal CQ11_03560 IPR011006 CheY-like superfamily CQ11_03560 IPR016032 Signal transduction response regulator, C-terminal effector CQ11_03565 IPR020629 Formamidopyrimidine-DNA glycosylase CQ11_03565 IPR010663 Zinc finger, FPG/IleRS-type CQ11_03565 IPR000214 Zinc finger, DNA glycosylase/AP lyase-type CQ11_03565 IPR010979 Ribosomal protein S13-like, H2TH CQ11_03565 IPR035937 MutM-like, N-terminal CQ11_03565 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain CQ11_03565 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding CQ11_03570 IPR000999 Ribonuclease III domain CQ11_03570 IPR036389 Ribonuclease III, endonuclease domain superfamily CQ11_03570 IPR014720 Double-stranded RNA-binding domain CQ11_03570 IPR011907 Ribonuclease III CQ11_03575 IPR003772 Large ribosomal RNA subunit accumulation protein YceD CQ11_03585 IPR001980 Phosphopantetheine adenylyltransferase CQ11_03585 IPR004821 Cytidyltransferase-like domain CQ11_03585 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CQ11_03595 IPR033454 RecG, wedge domain CQ11_03595 IPR004609 ATP-dependent DNA helicase RecG CQ11_03595 IPR001650 Helicase, C-terminal CQ11_03595 IPR011545 DEAD/DEAH box helicase domain CQ11_03595 IPR014001 Helicase superfamily 1/2, ATP-binding domain CQ11_03595 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_03595 IPR012340 Nucleic acid-binding, OB-fold CQ11_03600 IPR037147 Ribosomal protein L28/L24 superfamily CQ11_03600 IPR026569 Ribosomal protein L28/L24 CQ11_03600 IPR034704 L28p-like CQ11_03600 IPR001383 Ribosomal protein L28 CQ11_03610 IPR036676 PurM-like, C-terminal domain superfamily CQ11_03610 IPR010918 PurM-like, C-terminal domain CQ11_03610 IPR016188 PurM-like, N-terminal domain CQ11_03610 IPR036921 PurM-like, N-terminal domain superfamily CQ11_03610 IPR006283 Thiamine-monophosphate kinase CQ11_03615 IPR029039 Flavoprotein-like superfamily CQ11_03615 IPR005025 NADPH-dependent FMN reductase-like CQ11_03620 IPR011761 ATP-grasp fold CQ11_03620 IPR013815 ATP-grasp fold, subdomain 1 CQ11_03620 IPR016185 Pre-ATP-grasp domain superfamily CQ11_03620 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site CQ11_03620 IPR005905 D-alanine--D-alanine ligase CQ11_03620 IPR011095 D-alanine--D-alanine ligase, C-terminal CQ11_03620 IPR011127 D-alanine--D-alanine ligase, N-terminal domain CQ11_03625 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase CQ11_03625 IPR001986 Enolpyruvate transferase domain CQ11_03625 IPR036968 Enolpyruvate transferase domain superfamily CQ11_03625 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta CQ11_03635 IPR005322 Peptidase C69, dipeptidase A CQ11_03645 IPR001296 Glycosyl transferase, family 1 CQ11_03645 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain CQ11_03660 IPR010651 Sugar transport protein CQ11_03665 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 CQ11_03665 IPR001567 Peptidase M3A/M3B catalytic domain CQ11_03690 IPR035906 MetI-like superfamily CQ11_03690 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CQ11_03695 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CQ11_03695 IPR035906 MetI-like superfamily CQ11_03700 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CQ11_03700 IPR000843 LacI-type HTH domain CQ11_03700 IPR028082 Periplasmic binding protein-like I CQ11_03710 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 CQ11_03710 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CQ11_03710 IPR033910 Glutamyl-tRNA synthetase CQ11_03710 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial CQ11_03710 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily CQ11_03710 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain CQ11_03710 IPR000924 Glutamyl/glutaminyl-tRNA synthetase CQ11_03710 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding CQ11_03715 IPR015424 Pyridoxal phosphate-dependent transferase CQ11_03715 IPR004839 Aminotransferase, class I/classII CQ11_03715 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CQ11_03715 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CQ11_03720 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily CQ11_03720 IPR011234 Fumarylacetoacetase-like, C-terminal CQ11_03740 IPR024706 Peroxiredoxin, AhpC-type CQ11_03740 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant CQ11_03740 IPR036249 Thioredoxin-like superfamily CQ11_03740 IPR013766 Thioredoxin domain CQ11_03755 IPR020922 dITP/XTP pyrophosphatase CQ11_03755 IPR002637 Ham1-like protein CQ11_03755 IPR029001 Inosine triphosphate pyrophosphatase-like CQ11_03760 IPR001247 Exoribonuclease, phosphorolytic domain 1 CQ11_03760 IPR015847 Exoribonuclease, phosphorolytic domain 2 CQ11_03760 IPR036345 Exoribonuclease, PH domain 2 superfamily CQ11_03760 IPR027408 PNPase/RNase PH domain superfamily CQ11_03760 IPR020568 Ribosomal protein S5 domain 2-type fold CQ11_03760 IPR002381 Ribonuclease PH, bacterial-type CQ11_03760 IPR018336 Ribonuclease PH, conserved site CQ11_03765 IPR001279 Metallo-beta-lactamase CQ11_03765 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CQ11_03770 IPR033134 Asp/Glu racemase, active site 2 CQ11_03770 IPR001920 Asp/Glu racemase CQ11_03770 IPR018187 Asp/Glu racemase, active site 1 CQ11_03770 IPR004391 Glutamate racemase CQ11_03770 IPR015942 Asp/Glu/hydantoin racemase CQ11_03780 IPR022935 ATP-dependent Clp protease adaptor protein ClpS CQ11_03780 IPR003769 Adaptor protein ClpS, core CQ11_03780 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like CQ11_03785 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal CQ11_03785 IPR013785 Aldolase-type TIM barrel CQ11_03785 IPR040727 Nicotinate phosphoribosyltransferase, N-terminal domain CQ11_03785 IPR007229 Nicotinate phosphoribosyltransferase family CQ11_03785 IPR006405 Nicotinate phosphoribosyltransferase pncB-type CQ11_03785 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal CQ11_03790 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_03790 IPR014001 Helicase superfamily 1/2, ATP-binding domain CQ11_03790 IPR006935 Helicase/UvrB, N-terminal CQ11_03800 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily CQ11_03800 IPR000119 Histone-like DNA-binding protein CQ11_03805 IPR006037 Regulator of K+ conductance, C-terminal CQ11_03805 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily CQ11_03805 IPR006512 YidE/YbjL duplication CQ11_03820 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CQ11_03820 IPR022926 NH(3)-dependent NAD(+) synthetase CQ11_03820 IPR022310 NAD/GMP synthase CQ11_03820 IPR003694 NAD(+) synthetase CQ11_03835 IPR015500 Peptidase S8, subtilisin-related CQ11_03835 IPR023828 Peptidase S8, subtilisin, Ser-active site CQ11_03835 IPR022398 Peptidase S8, subtilisin, His-active site CQ11_03835 IPR034216 C5a peptidase-like domain CQ11_03835 IPR010435 Fn3-like domain CQ11_03835 IPR019948 Gram-positive LPXTG cell wall anchor CQ11_03835 IPR013783 Immunoglobulin-like fold CQ11_03835 IPR019931 LPXTG cell wall anchor domain CQ11_03835 IPR003137 PA domain CQ11_03835 IPR023827 Peptidase S8, subtilisin, Asp-active site CQ11_03835 IPR036852 Peptidase S8/S53 domain superfamily CQ11_03835 IPR000209 Peptidase S8/S53 domain CQ11_03845 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CQ11_03845 IPR010233 Ubiquinone biosynthesis O-methyltransferase CQ11_03860 IPR000835 MarR-type HTH domain CQ11_03860 IPR023187 Transcriptional regulator MarR-type, conserved site CQ11_03860 IPR036390 Winged helix DNA-binding domain superfamily CQ11_03860 IPR036388 Winged helix-like DNA-binding domain superfamily CQ11_03865 IPR004602 UvrABC system subunit A CQ11_03865 IPR041552 UvrA DNA-binding domain CQ11_03865 IPR041102 UvrA, interaction domain CQ11_03865 IPR017871 ABC transporter, conserved site CQ11_03865 IPR003439 ABC transporter-like CQ11_03865 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_03885 IPR029062 Class I glutamine amidotransferase-like CQ11_03885 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily CQ11_03885 IPR040449 LD-carboxypeptidase, N-terminal CQ11_03885 IPR003507 Peptidase family S66 CQ11_03885 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal CQ11_03885 IPR040921 LD-carboxypeptidase, C-terminal CQ11_03890 IPR006357 HAD-superfamily hydrolase, subfamily IIA CQ11_03890 IPR023214 HAD superfamily CQ11_03890 IPR036412 HAD-like superfamily CQ11_03895 IPR020081 SsrA-binding protein, conserved site CQ11_03895 IPR000037 SsrA-binding protein CQ11_03895 IPR023620 Small protein B CQ11_03900 IPR016047 Peptidase M23 CQ11_03900 IPR007340 Opacity-associated protein A CQ11_03900 IPR011055 Duplicated hybrid motif CQ11_03905 IPR003838 ABC transporter permease protein domain CQ11_03905 IPR004513 Cell division protein FtsX CQ11_03905 IPR040690 FtsX, extracellular domain CQ11_03910 IPR017871 ABC transporter, conserved site CQ11_03910 IPR005286 Cell division protein FtsE, ATP-binding CQ11_03910 IPR003439 ABC transporter-like CQ11_03910 IPR003593 AAA+ ATPase domain CQ11_03910 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_03915 IPR005139 Peptide chain release factor CQ11_03915 IPR004374 Peptide chain release factor 2 CQ11_03915 IPR000352 Peptide chain release factor class I CQ11_03950 IPR001482 Type II/IV secretion system protein CQ11_03950 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_03950 IPR022399 Helicase/secretion neighbourhood ATPase CQ11_03960 IPR005751 ATP-dependent DNA helicase PcrA CQ11_03960 IPR013986 DExx box DNA helicase domain superfamily CQ11_03960 IPR014017 UvrD-like DNA helicase, C-terminal CQ11_03960 IPR000212 DNA helicase, UvrD/REP type CQ11_03960 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_03960 IPR014016 UvrD-like helicase, ATP-binding domain CQ11_03960 IPR034739 UvrD/AddA helicase, N-terminal CQ11_03975 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site CQ11_03975 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_03975 IPR014014 RNA helicase, DEAD-box type, Q motif CQ11_03975 IPR001650 Helicase, C-terminal CQ11_03975 IPR014001 Helicase superfamily 1/2, ATP-binding domain CQ11_03975 IPR030880 DEAD-box ATP-dependent RNA helicase CshA CQ11_03975 IPR011545 DEAD/DEAH box helicase domain CQ11_03980 IPR002771 Multiple antibiotic resistance (MarC)-related CQ11_03990 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site CQ11_03990 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal CQ11_03990 IPR036005 Creatinase/aminopeptidase-like CQ11_03990 IPR000994 Peptidase M24 CQ11_03990 IPR007865 Aminopeptidase P, N-terminal CQ11_03995 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily CQ11_03995 IPR038076 MgtE, N-terminal domain superfamily CQ11_03995 IPR006667 SLC41 divalent cation transporters, integral membrane domain CQ11_03995 IPR006669 Magnesium transporter MgtE CQ11_03995 IPR000644 CBS domain CQ11_03995 IPR006668 Magnesium transporter, MgtE intracellular domain CQ11_03995 IPR038048 Magnesium transporter MgtE, transmembrane domain CQ11_04005 IPR034904 Fe-S cluster assembly domain superfamily CQ11_04005 IPR002744 MIP18 family-like CQ11_04005 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 CQ11_04005 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_04005 IPR000808 Mrp, conserved site CQ11_04005 IPR019591 Mrp/NBP35 ATP-binding protein CQ11_04010 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CQ11_04010 IPR002935 Class I-like SAM-dependent O-methyltransferase CQ11_04020 IPR031100 LOG family CQ11_04020 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG CQ11_04025 IPR000845 Nucleoside phosphorylase domain CQ11_04025 IPR035994 Nucleoside phosphorylase superfamily CQ11_04025 IPR011269 Putative purine nucleotide phosphorylase CQ11_04025 IPR018099 Purine phosphorylase, family 2, conserved site CQ11_04025 IPR011268 Purine nucleoside phosphorylase CQ11_04030 IPR016066 Alpha-D-phosphohexomutase, conserved site CQ11_04030 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily CQ11_04030 IPR005843 Alpha-D-phosphohexomutase, C-terminal CQ11_04030 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III CQ11_04030 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II CQ11_04030 IPR005841 Alpha-D-phosphohexomutase superfamily CQ11_04030 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I CQ11_04030 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III CQ11_04035 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CQ11_04035 IPR001647 DNA-binding HTH domain, TetR-type CQ11_04035 IPR009057 Homeobox-like domain superfamily CQ11_04045 IPR013785 Aldolase-type TIM barrel CQ11_04045 IPR002915 DeoC/FbaB/ lacD aldolase CQ11_04045 IPR011343 Deoxyribose-phosphate aldolase CQ11_04045 IPR028581 Deoxyribose-phosphate aldolase type I CQ11_04055 IPR000312 Glycosyl transferase, family 3 CQ11_04055 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase CQ11_04055 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily CQ11_04055 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily CQ11_04055 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily CQ11_04055 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal CQ11_04055 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic CQ11_04055 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site CQ11_04055 IPR017459 Glycosyl transferase family 3, N-terminal domain CQ11_04060 IPR002125 Cytidine and deoxycytidylate deaminase domain CQ11_04060 IPR016193 Cytidine deaminase-like CQ11_04100 IPR036291 NAD(P)-binding domain superfamily CQ11_04100 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CQ11_04100 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CQ11_04100 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase CQ11_04105 IPR015424 Pyridoxal phosphate-dependent transferase CQ11_04105 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CQ11_04105 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CQ11_04105 IPR001085 Serine hydroxymethyltransferase CQ11_04105 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site CQ11_04105 IPR039429 Serine hydroxymethyltransferase-like domain CQ11_04110 IPR004810 Formyltetrahydrofolate deformylase CQ11_04110 IPR036477 Formyl transferase, N-terminal domain superfamily CQ11_04110 IPR002376 Formyl transferase, N-terminal CQ11_04110 IPR041729 Formyltetrahydrofolate deformylase, C-terminal hydrolase domain CQ11_04110 IPR002912 ACT domain CQ11_04120 IPR008278 4'-phosphopantetheinyl transferase domain CQ11_04120 IPR002582 Holo-[acyl carrier protein] synthase CQ11_04120 IPR004568 Phosphopantetheine-protein transferase domain CQ11_04120 IPR037143 4'-phosphopantetheinyl transferase domain superfamily CQ11_04125 IPR014043 Acyl transferase CQ11_04125 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding CQ11_04125 IPR024925 Malonyl CoA-acyl carrier protein transacylase CQ11_04125 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase CQ11_04125 IPR001227 Acyl transferase domain superfamily CQ11_04125 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type CQ11_04130 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal CQ11_04130 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal CQ11_04130 IPR034733 Acetyl-CoA carboxylase CQ11_04130 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit CQ11_04130 IPR029045 ClpP/crotonase-like domain superfamily CQ11_04135 IPR005482 Biotin carboxylase, C-terminal CQ11_04135 IPR011764 Biotin carboxylation domain CQ11_04135 IPR011053 Single hybrid motif CQ11_04135 IPR011054 Rudiment single hybrid motif CQ11_04135 IPR011761 ATP-grasp fold CQ11_04135 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain CQ11_04135 IPR000089 Biotin/lipoyl attachment CQ11_04135 IPR001882 Biotin-binding site CQ11_04135 IPR005481 Biotin carboxylase-like, N-terminal domain CQ11_04135 IPR016185 Pre-ATP-grasp domain superfamily CQ11_04160 IPR036188 FAD/NAD(P)-binding domain superfamily CQ11_04160 IPR002938 FAD-binding domain CQ11_04160 IPR039651 Protein FixC-like CQ11_04165 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site CQ11_04165 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CQ11_04165 IPR001308 Electron transfer flavoprotein alpha subunit/FixB CQ11_04165 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal CQ11_04165 IPR029035 DHS-like NAD/FAD-binding domain superfamily CQ11_04165 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal CQ11_04180 IPR001279 Metallo-beta-lactamase CQ11_04180 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CQ11_04185 IPR036259 MFS transporter superfamily CQ11_04185 IPR005828 Major facilitator, sugar transporter-like CQ11_04185 IPR020846 Major facilitator superfamily domain CQ11_04195 IPR025110 AMP-binding enzyme, C-terminal domain CQ11_04195 IPR020845 AMP-binding, conserved site CQ11_04195 IPR023456 Crotonobetaine/carnitine-CoA ligase CaiC CQ11_04195 IPR000873 AMP-dependent synthetase/ligase CQ11_04195 IPR042099 AMP-dependent synthetase-like superfamily CQ11_04200 IPR023606 CoA-transferase family III domain superfamily CQ11_04200 IPR003673 CoA-transferase family III CQ11_04200 IPR023452 L-carnitine CoA-transferase CaiB CQ11_04205 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CQ11_04205 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain CQ11_04205 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal CQ11_04205 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CQ11_04205 IPR023450 Crotonobetainyl-CoA reductase CaiA CQ11_04205 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily CQ11_04205 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily CQ11_04205 IPR006089 Acyl-CoA dehydrogenase, conserved site CQ11_04210 IPR029058 Alpha/Beta hydrolase fold CQ11_04210 IPR013094 Alpha/beta hydrolase fold-3 CQ11_04210 IPR023508 Acetyl esterase CQ11_04210 IPR033140 Lipase, GDXG, putative serine active site CQ11_04210 IPR002168 Lipase, GDXG, putative histidine active site CQ11_04230 IPR036291 NAD(P)-binding domain superfamily CQ11_04230 IPR010945 Malate dehydrogenase, type 2 CQ11_04230 IPR001252 Malate dehydrogenase, active site CQ11_04230 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal CQ11_04230 IPR001236 Lactate/malate dehydrogenase, N-terminal CQ11_04230 IPR022383 Lactate/malate dehydrogenase, C-terminal CQ11_04230 IPR001557 L-lactate/malate dehydrogenase CQ11_04245 IPR001672 Phosphoglucose isomerase (PGI) CQ11_04245 IPR035482 Phosphoglucose isomerase, SIS domain 2 CQ11_04245 IPR035476 Phosphoglucose isomerase, SIS domain 1 CQ11_04245 IPR018189 Phosphoglucose isomerase, conserved site CQ11_04245 IPR023096 Phosphoglucose isomerase, C-terminal CQ11_04250 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type CQ11_04250 IPR022953 ATP-dependent 6-phosphofructokinase CQ11_04250 IPR015912 Phosphofructokinase, conserved site CQ11_04250 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic CQ11_04250 IPR035966 Phosphofructokinase superfamily CQ11_04250 IPR000023 Phosphofructokinase domain CQ11_04260 IPR024051 AICAR transformylase, duplicated domain superfamily CQ11_04260 IPR036914 Methylglyoxal synthase-like domain superfamily CQ11_04260 IPR011607 Methylglyoxal synthase-like domain CQ11_04260 IPR016193 Cytidine deaminase-like CQ11_04260 IPR002695 Bifunctional purine biosynthesis protein PurH-like CQ11_04275 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site CQ11_04275 IPR016102 Succinyl-CoA synthetase-like CQ11_04275 IPR036291 NAD(P)-binding domain superfamily CQ11_04275 IPR005811 ATP-citrate lyase/succinyl-CoA ligase CQ11_04275 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site CQ11_04275 IPR003781 CoA-binding CQ11_04275 IPR005810 Succinyl-CoA ligase, alpha subunit CQ11_04280 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type CQ11_04280 IPR013815 ATP-grasp fold, subdomain 1 CQ11_04280 IPR011761 ATP-grasp fold CQ11_04280 IPR016102 Succinyl-CoA synthetase-like CQ11_04280 IPR005809 Succinate--CoA synthetase, beta subunit CQ11_04280 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site CQ11_04280 IPR005811 ATP-citrate lyase/succinyl-CoA ligase CQ11_04285 IPR036514 SGNH hydrolase superfamily CQ11_04285 IPR002656 Acyltransferase 3 CQ11_04290 IPR013986 DExx box DNA helicase domain superfamily CQ11_04290 IPR014017 UvrD-like DNA helicase, C-terminal CQ11_04290 IPR000212 DNA helicase, UvrD/REP type CQ11_04290 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_04290 IPR005751 ATP-dependent DNA helicase PcrA CQ11_04290 IPR034739 UvrD/AddA helicase, N-terminal CQ11_04290 IPR014016 UvrD-like helicase, ATP-binding domain CQ11_04315 IPR031157 Tr-type G domain, conserved site CQ11_04315 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CQ11_04315 IPR000640 Elongation factor EFG, domain V-like CQ11_04315 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_04315 IPR035647 EF-G domain III/V-like CQ11_04315 IPR041095 Elongation Factor G, domain II CQ11_04315 IPR020568 Ribosomal protein S5 domain 2-type fold CQ11_04315 IPR000795 Transcription factor, GTP-binding domain CQ11_04315 IPR005517 Translation elongation factor EFG/EF2, domain IV CQ11_04315 IPR035650 Tetracycline resistance protein, C-terminal CQ11_04315 IPR009000 Translation protein, beta-barrel domain superfamily CQ11_04315 IPR005225 Small GTP-binding protein domain CQ11_04335 IPR011010 DNA breaking-rejoining enzyme, catalytic core CQ11_04335 IPR013762 Integrase-like, catalytic domain superfamily CQ11_04335 IPR002104 Integrase, catalytic domain CQ11_04335 IPR010998 Integrase/recombinase, N-terminal CQ11_04335 IPR004107 Integrase, SAM-like, N-terminal CQ11_04335 IPR011932 Tyrosine recombinase XerD CQ11_04335 IPR023009 Tyrosine recombinase XerC/XerD CQ11_04350 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CQ11_04350 IPR022310 NAD/GMP synthase CQ11_04350 IPR004739 GMP synthase, glutamine amidotransferase CQ11_04350 IPR022955 GMP synthase CQ11_04350 IPR017926 Glutamine amidotransferase CQ11_04350 IPR029062 Class I glutamine amidotransferase-like CQ11_04350 IPR001674 GMP synthase, C-terminal CQ11_04350 IPR025777 GMP synthetase ATP pyrophosphatase domain CQ11_04355 IPR006145 Pseudouridine synthase, RsuA/RluA CQ11_04355 IPR020103 Pseudouridine synthase, catalytic domain superfamily CQ11_04355 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site CQ11_04360 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_04360 IPR004614 Phosphate acetyltransferase CQ11_04360 IPR042113 Phosphate acetyltransferase, domain 1 CQ11_04360 IPR010766 DRTGG CQ11_04360 IPR016475 Phosphate acetyltransferase, bacteria CQ11_04360 IPR002505 Phosphate acetyl/butaryl transferase CQ11_04360 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily CQ11_04360 IPR042112 Phosphate acetyltransferase, domain 2 CQ11_04365 IPR004372 Acetate/propionate kinase CQ11_04365 IPR023865 Aliphatic acid kinase, short-chain, conserved site CQ11_04365 IPR000890 Aliphatic acid kinase, short-chain CQ11_04380 IPR015854 ABC transporter, lipoprotein release, LolD CQ11_04380 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_04380 IPR003593 AAA+ ATPase domain CQ11_04380 IPR017871 ABC transporter, conserved site CQ11_04380 IPR003439 ABC transporter-like CQ11_04390 IPR022761 Fumarate lyase, N-terminal CQ11_04390 IPR000362 Fumarate lyase family CQ11_04390 IPR020557 Fumarate lyase, conserved site CQ11_04390 IPR018951 Fumarase C, C-terminal CQ11_04390 IPR024083 Fumarase/histidase, N-terminal CQ11_04390 IPR005677 Fumarate hydratase, class II CQ11_04390 IPR008948 L-Aspartase-like CQ11_04395 IPR001093 IMP dehydrogenase/GMP reductase CQ11_04395 IPR013785 Aldolase-type TIM barrel CQ11_04395 IPR005992 IMP dehydrogenase-related 2 CQ11_04405 IPR001093 IMP dehydrogenase/GMP reductase CQ11_04405 IPR000644 CBS domain CQ11_04405 IPR005990 Inosine-5'-monophosphate dehydrogenase CQ11_04405 IPR013785 Aldolase-type TIM barrel CQ11_04405 IPR015875 IMP dehydrogenase / GMP reductase, conserved site CQ11_04410 IPR034768 WhiB-like iron-sulfur binding domain CQ11_04410 IPR003482 Transcription factor WhiB CQ11_04420 IPR010074 Phosphoribosylformylglycinamidine subunit PurL CQ11_04420 IPR041609 Phosphoribosylformylglycinamidine synthase, linker domain CQ11_04420 IPR010918 PurM-like, C-terminal domain CQ11_04420 IPR036676 PurM-like, C-terminal domain superfamily CQ11_04420 IPR016188 PurM-like, N-terminal domain CQ11_04420 IPR036921 PurM-like, N-terminal domain superfamily CQ11_04425 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal CQ11_04425 IPR011054 Rudiment single hybrid motif CQ11_04425 IPR020559 Phosphoribosylglycinamide synthetase, conserved site CQ11_04425 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily CQ11_04425 IPR016185 Pre-ATP-grasp domain superfamily CQ11_04425 IPR000115 Phosphoribosylglycinamide synthetase CQ11_04425 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CQ11_04425 IPR013815 ATP-grasp fold, subdomain 1 CQ11_04425 IPR011761 ATP-grasp fold CQ11_04425 IPR020560 Phosphoribosylglycinamide synthetase, C-domain CQ11_04430 IPR002376 Formyl transferase, N-terminal CQ11_04430 IPR001555 Phosphoribosylglycinamide formyltransferase, active site CQ11_04430 IPR036477 Formyl transferase, N-terminal domain superfamily CQ11_04430 IPR004607 Phosphoribosylglycinamide formyltransferase CQ11_04435 IPR036921 PurM-like, N-terminal domain superfamily CQ11_04435 IPR016188 PurM-like, N-terminal domain CQ11_04435 IPR036676 PurM-like, C-terminal domain superfamily CQ11_04435 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase CQ11_04435 IPR010918 PurM-like, C-terminal domain CQ11_04440 IPR035584 Amidophosphoribosyltransferase, N-terminal CQ11_04440 IPR005854 Amidophosphoribosyltransferase CQ11_04440 IPR029057 Phosphoribosyltransferase-like CQ11_04440 IPR000836 Phosphoribosyltransferase domain CQ11_04440 IPR017932 Glutamine amidotransferase type 2 domain CQ11_04440 IPR029055 Nucleophile aminohydrolases, N-terminal CQ11_04445 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase CQ11_04445 IPR018236 SAICAR synthetase, conserved site CQ11_04445 IPR033934 Bacterial and archaeal 5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide synthase CQ11_04445 IPR028923 SAICAR synthetase/ADE2, N-terminal CQ11_04450 IPR024694 PurE, prokaryotic type CQ11_04450 IPR035893 PurE domain superfamily CQ11_04450 IPR033747 Class I PurE CQ11_04450 IPR000031 PurE domain CQ11_04460 IPR011032 GroES-like superfamily CQ11_04460 IPR018369 Chaperonin GroES, conserved site CQ11_04460 IPR037124 GroES chaperonin superfamily CQ11_04460 IPR020818 GroES chaperonin family CQ11_04470 IPR003689 Zinc/iron permease CQ11_04470 IPR023498 Zinc transporter ZupT CQ11_04475 IPR000905 Gcp-like domain CQ11_04475 IPR017861 Kae1/TsaD family CQ11_04475 IPR017860 Peptidase M22, conserved site CQ11_04475 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD CQ11_04480 IPR037272 Sodium:neurotransmitter symporter superfamily CQ11_04480 IPR000175 Sodium:neurotransmitter symporter CQ11_04490 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein CQ11_04490 IPR036010 2Fe-2S ferredoxin-like superfamily CQ11_04490 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain CQ11_04490 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site CQ11_04490 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal CQ11_04490 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CQ11_04490 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CQ11_04490 IPR012675 Beta-grasp domain superfamily CQ11_04490 IPR009051 Alpha-helical ferredoxin CQ11_04495 IPR036188 FAD/NAD(P)-binding domain superfamily CQ11_04495 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain CQ11_04495 IPR011280 Succinate dehydrogenase/fumarate reductase flavoprotein subunit, low-GC Gram-positive bacteria CQ11_04495 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily CQ11_04495 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal CQ11_04495 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily CQ11_04495 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site CQ11_04520 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE CQ11_04520 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_04525 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal CQ11_04525 IPR000821 Alanine racemase CQ11_04525 IPR011079 Alanine racemase, C-terminal CQ11_04525 IPR001608 Alanine racemase, N-terminal CQ11_04525 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site CQ11_04525 IPR029066 PLP-binding barrel CQ11_04530 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase CQ11_04530 IPR004443 YjeF N-terminal domain CQ11_04530 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr CQ11_04530 IPR036652 YjeF N-terminal domain superfamily CQ11_04530 IPR017953 Carbohydrate kinase, predicted, conserved site CQ11_04530 IPR029056 Ribokinase-like CQ11_04535 IPR001347 Sugar isomerase (SIS) CQ11_04535 IPR029055 Nucleophile aminohydrolases, N-terminal CQ11_04535 IPR035490 GlmS/FrlB, SIS domain 2 CQ11_04535 IPR035466 GlmS/AgaS, SIS domain 1 CQ11_04535 IPR017932 Glutamine amidotransferase type 2 domain CQ11_04535 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising CQ11_04540 IPR006083 Phosphoribulokinase/uridine kinase CQ11_04540 IPR004566 Pantothenate kinase CQ11_04540 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_04545 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily CQ11_04545 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I CQ11_04545 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III CQ11_04545 IPR005843 Alpha-D-phosphohexomutase, C-terminal CQ11_04545 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III CQ11_04545 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II CQ11_04545 IPR005841 Alpha-D-phosphohexomutase superfamily CQ11_04545 IPR006352 Phosphoglucosamine mutase, bacterial type CQ11_04550 IPR000754 Ribosomal protein S9 CQ11_04550 IPR020568 Ribosomal protein S5 domain 2-type fold CQ11_04550 IPR020574 Ribosomal protein S9, conserved site CQ11_04550 IPR023035 Ribosomal protein S9, bacterial/plastid CQ11_04550 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CQ11_04555 IPR023563 Ribosomal protein L13, conserved site CQ11_04555 IPR005823 Ribosomal protein L13, bacterial-type CQ11_04555 IPR005822 Ribosomal protein L13 CQ11_04555 IPR036899 Ribosomal protein L13 superfamily CQ11_04565 IPR009825 ECF transporter, substrate-specific component-like CQ11_04565 IPR022914 Protein of unknown function UPF0397 CQ11_04570 IPR003439 ABC transporter-like CQ11_04570 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_04570 IPR017871 ABC transporter, conserved site CQ11_04570 IPR022216 Putative ABC cobalt transporter CQ11_04570 IPR003593 AAA+ ATPase domain CQ11_04580 IPR000847 Transcription regulator HTH, LysR CQ11_04580 IPR036388 Winged helix-like DNA-binding domain superfamily CQ11_04580 IPR005119 LysR, substrate-binding CQ11_04580 IPR036390 Winged helix DNA-binding domain superfamily CQ11_04600 IPR000600 ROK family CQ11_04610 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain CQ11_04610 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CQ11_04610 IPR035906 MetI-like superfamily CQ11_04615 IPR003439 ABC transporter-like CQ11_04615 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type CQ11_04615 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_04615 IPR003593 AAA+ ATPase domain CQ11_04615 IPR017871 ABC transporter, conserved site CQ11_04620 IPR009061 Putative DNA-binding domain superfamily CQ11_04620 IPR000551 MerR-type HTH domain CQ11_04620 IPR036244 TipA-like multidrug resistance regulator, antibiotic-recognition domain CQ11_04620 IPR012925 TipAS antibiotic-recognition domain CQ11_04630 IPR000456 Ribosomal protein L17 CQ11_04630 IPR036373 Ribosomal protein L17 superfamily CQ11_04635 IPR011262 DNA-directed RNA polymerase, insert domain CQ11_04635 IPR036643 DNA-directed RNA polymerase, insert domain superfamily CQ11_04635 IPR011260 RNA polymerase, alpha subunit, C-terminal CQ11_04635 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type CQ11_04635 IPR011773 DNA-directed RNA polymerase, alpha subunit CQ11_04635 IPR036603 RNA polymerase, RBP11-like subunit CQ11_04640 IPR001971 Ribosomal protein S11 CQ11_04640 IPR019981 Ribosomal protein S11, bacterial-type CQ11_04640 IPR018102 Ribosomal S11, conserved site CQ11_04640 IPR036967 Ribosomal protein S11 superfamily CQ11_04645 IPR019980 Ribosomal protein S13, bacterial-type CQ11_04645 IPR018269 Ribosomal protein S13, conserved site CQ11_04645 IPR010979 Ribosomal protein S13-like, H2TH CQ11_04645 IPR001892 Ribosomal protein S13 CQ11_04645 IPR027437 30s ribosomal protein S13, C-terminal CQ11_04650 IPR035977 Ribosomal protein L36 superfamily CQ11_04650 IPR000473 Ribosomal protein L36 CQ11_04655 IPR006196 RNA-binding domain, S1, IF1 type CQ11_04655 IPR012340 Nucleic acid-binding, OB-fold CQ11_04655 IPR004368 Translation initiation factor IF-1 CQ11_04660 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 CQ11_04660 IPR036005 Creatinase/aminopeptidase-like CQ11_04660 IPR000994 Peptidase M24 CQ11_04660 IPR001714 Peptidase M24, methionine aminopeptidase CQ11_04665 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_04665 IPR033690 Adenylate kinase, conserved site CQ11_04665 IPR000850 Adenylate kinase/UMP-CMP kinase CQ11_04670 IPR023201 SecY domain superfamily CQ11_04670 IPR002208 SecY/SEC61-alpha family CQ11_04670 IPR030659 SecY conserved site CQ11_04670 IPR026593 Protein translocase subunit SecY CQ11_04675 IPR030878 Ribosomal protein L15 CQ11_04675 IPR005749 Ribosomal protein L15, bacterial-type CQ11_04675 IPR036227 Ribosomal L18e/L15P superfamily CQ11_04675 IPR001196 Ribosomal protein L15, conserved site CQ11_04675 IPR021131 Ribosomal protein L18e/L15P CQ11_04680 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain CQ11_04680 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily CQ11_04680 IPR018038 Ribosomal protein L30, conserved site CQ11_04680 IPR005996 Ribosomal protein L30, bacterial-type CQ11_04685 IPR018192 Ribosomal protein S5, N-terminal, conserved site CQ11_04685 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CQ11_04685 IPR020568 Ribosomal protein S5 domain 2-type fold CQ11_04685 IPR013810 Ribosomal protein S5, N-terminal CQ11_04685 IPR005712 Ribosomal protein S5, bacterial-type CQ11_04685 IPR000851 Ribosomal protein S5 CQ11_04685 IPR005324 Ribosomal protein S5, C-terminal CQ11_04690 IPR004389 Ribosomal protein L18, bacterial-type CQ11_04690 IPR005484 Ribosomal protein L18 CQ11_04695 IPR020040 Ribosomal protein L6, alpha-beta domain CQ11_04695 IPR002358 Ribosomal protein L6, conserved site CQ11_04695 IPR019906 Ribosomal protein L6, bacterial-type CQ11_04695 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily CQ11_04695 IPR000702 Ribosomal protein L6 CQ11_04700 IPR000630 Ribosomal protein S8 CQ11_04700 IPR035987 Ribosomal protein S8 superfamily CQ11_04705 IPR018271 Ribosomal protein S14, conserved site CQ11_04705 IPR023053 Ribosomal protein S14, type Z CQ11_04705 IPR001209 Ribosomal protein S14 CQ11_04710 IPR031310 Ribosomal protein L5, N-terminal CQ11_04710 IPR020930 Ribosomal protein L5, bacterial-type CQ11_04710 IPR022803 Ribosomal protein L5 domain superfamily CQ11_04710 IPR020929 Ribosomal protein L5, conserved site CQ11_04710 IPR031309 Ribosomal protein L5, C-terminal CQ11_04710 IPR002132 Ribosomal protein L5 CQ11_04715 IPR041988 Ribosomal Protein L26/L24, KOW domain CQ11_04715 IPR014722 Ribosomal protein L2, domain 2 CQ11_04715 IPR008991 Translation protein SH3-like domain superfamily CQ11_04715 IPR003256 Ribosomal protein L24 CQ11_04720 IPR019972 Ribosomal protein L14P, conserved site CQ11_04720 IPR005745 Ribosomal protein L14P, bacterial-type CQ11_04720 IPR000218 Ribosomal protein L14P CQ11_04720 IPR036853 Ribosomal protein L14 superfamily CQ11_04725 IPR019984 30S ribosomal protein S17 CQ11_04725 IPR000266 Ribosomal protein S17/S11 CQ11_04725 IPR012340 Nucleic acid-binding, OB-fold CQ11_04725 IPR019979 Ribosomal protein S17, conserved site CQ11_04730 IPR001854 Ribosomal protein L29/L35 CQ11_04730 IPR036049 Ribosomal protein L29/L35 superfamily CQ11_04730 IPR018254 Ribosomal protein L29, conserved site CQ11_04735 IPR000114 Ribosomal protein L16 CQ11_04735 IPR036920 Ribosomal protein L10e/L16 superfamily CQ11_04735 IPR020798 Ribosomal protein L16, conserved site CQ11_04735 IPR016180 Ribosomal protein L10e/L16 CQ11_04740 IPR004044 K Homology domain, type 2 CQ11_04740 IPR018280 Ribosomal protein S3, conserved site CQ11_04740 IPR036419 Ribosomal protein S3, C-terminal domain superfamily CQ11_04740 IPR001351 Ribosomal protein S3, C-terminal CQ11_04740 IPR005704 Ribosomal protein S3, bacterial-type CQ11_04740 IPR004087 K Homology domain CQ11_04740 IPR009019 K homology domain superfamily, prokaryotic type CQ11_04740 IPR015946 K homology domain-like, alpha/beta CQ11_04745 IPR036394 Ribosomal protein L22/L17 superfamily CQ11_04745 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type CQ11_04745 IPR018260 Ribosomal protein L22/L17, conserved site CQ11_04745 IPR001063 Ribosomal protein L22/L17 CQ11_04750 IPR020934 Ribosomal protein S19 conserved site CQ11_04750 IPR005732 Ribosomal protein S19, bacterial-type CQ11_04750 IPR002222 Ribosomal protein S19/S15 CQ11_04750 IPR023575 Ribosomal protein S19, superfamily CQ11_04755 IPR014722 Ribosomal protein L2, domain 2 CQ11_04755 IPR002171 Ribosomal protein L2 CQ11_04755 IPR005880 Ribosomal protein L2, bacterial/organellar-type CQ11_04755 IPR022669 Ribosomal protein L2, C-terminal CQ11_04755 IPR012340 Nucleic acid-binding, OB-fold CQ11_04755 IPR022666 Ribosomal Proteins L2, RNA binding domain CQ11_04755 IPR014726 Ribosomal protein L2, domain 3 CQ11_04755 IPR008991 Translation protein SH3-like domain superfamily CQ11_04755 IPR022671 Ribosomal protein L2, conserved site CQ11_04760 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily CQ11_04760 IPR013025 Ribosomal protein L25/L23 CQ11_04760 IPR012678 Ribosomal protein L23/L15e core domain superfamily CQ11_04765 IPR002136 Ribosomal protein L4/L1e CQ11_04765 IPR023574 Ribosomal protein L4 domain superfamily CQ11_04765 IPR013005 50S ribosomal protein uL4 CQ11_04770 IPR009000 Translation protein, beta-barrel domain superfamily CQ11_04770 IPR000597 Ribosomal protein L3 CQ11_04770 IPR019927 Ribosomal protein L3, bacterial/organelle-type CQ11_04770 IPR019926 Ribosomal protein L3, conserved site CQ11_04775 IPR001848 Ribosomal protein S10 CQ11_04775 IPR036838 Ribosomal protein S10 domain superfamily CQ11_04775 IPR018268 Ribosomal protein S10, conserved site CQ11_04775 IPR027486 Ribosomal protein S10 domain CQ11_04780 IPR037512 Phosphoglycolate phosphatase, prokaryotic CQ11_04780 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic CQ11_04780 IPR023214 HAD superfamily CQ11_04780 IPR023198 Phosphoglycolate phosphatase-like, domain 2 CQ11_04780 IPR036412 HAD-like superfamily CQ11_04780 IPR006439 HAD hydrolase, subfamily IA CQ11_04780 IPR041492 Haloacid dehalogenase-like hydrolase CQ11_04785 IPR035077 Phosphoenolpyruvate carboxykinase, C-terminal P-loop domain CQ11_04785 IPR008209 Phosphoenolpyruvate carboxykinase, GTP-utilising CQ11_04785 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal CQ11_04785 IPR018091 Phosphoenolpyruvate carboxykinase, GTP-utilising, conserved site CQ11_04785 IPR035078 Phosphoenolpyruvate carboxykinase, GTP-utilising, N-terminal CQ11_04785 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal CQ11_04790 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain CQ11_04790 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle CQ11_04790 IPR004161 Translation elongation factor EFTu-like, domain 2 CQ11_04790 IPR000795 Transcription factor, GTP-binding domain CQ11_04790 IPR009000 Translation protein, beta-barrel domain superfamily CQ11_04790 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_04790 IPR033720 Elongation factor Tu, domain 2 CQ11_04790 IPR031157 Tr-type G domain, conserved site CQ11_04790 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CQ11_04790 IPR005225 Small GTP-binding protein domain CQ11_04790 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal CQ11_04795 IPR000640 Elongation factor EFG, domain V-like CQ11_04795 IPR009022 Elongation factor G, domain III CQ11_04795 IPR035647 EF-G domain III/V-like CQ11_04795 IPR035649 EFG, domain V CQ11_04795 IPR041095 Elongation Factor G, domain II CQ11_04795 IPR004161 Translation elongation factor EFTu-like, domain 2 CQ11_04795 IPR004540 Translation elongation factor EFG/EF2 CQ11_04795 IPR009000 Translation protein, beta-barrel domain superfamily CQ11_04795 IPR000795 Transcription factor, GTP-binding domain CQ11_04795 IPR005225 Small GTP-binding protein domain CQ11_04795 IPR005517 Translation elongation factor EFG/EF2, domain IV CQ11_04795 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CQ11_04795 IPR020568 Ribosomal protein S5 domain 2-type fold CQ11_04795 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_04795 IPR031157 Tr-type G domain, conserved site CQ11_04800 IPR000235 Ribosomal protein S5/S7 CQ11_04800 IPR005717 Ribosomal protein S7, bacterial/organellar-type CQ11_04800 IPR020606 Ribosomal protein S7, conserved site CQ11_04800 IPR023798 Ribosomal protein S7 domain CQ11_04800 IPR036823 Ribosomal protein S7 domain superfamily CQ11_04805 IPR012340 Nucleic acid-binding, OB-fold CQ11_04805 IPR006032 Ribosomal protein S12/S23 CQ11_04805 IPR005679 Ribosomal protein S12, bacterial-type CQ11_04810 IPR004841 Amino acid permease/ SLC12A domain CQ11_04810 IPR004840 Amino acid permease, conserved site CQ11_04815 IPR007066 RNA polymerase Rpb1, domain 3 CQ11_04815 IPR042102 RNA polymerase Rpb1, domain 3 superfamily CQ11_04815 IPR038120 RNA polymerase Rpb1, funnel domain superfamily CQ11_04815 IPR007083 RNA polymerase Rpb1, domain 4 CQ11_04815 IPR007081 RNA polymerase Rpb1, domain 5 CQ11_04815 IPR006592 RNA polymerase, N-terminal CQ11_04815 IPR007080 RNA polymerase Rpb1, domain 1 CQ11_04815 IPR012754 DNA-directed RNA polymerase, subunit beta-prime CQ11_04815 IPR000722 RNA polymerase, alpha subunit CQ11_04820 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain CQ11_04820 IPR007642 RNA polymerase Rpb2, domain 2 CQ11_04820 IPR007121 RNA polymerase, beta subunit, conserved site CQ11_04820 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain CQ11_04820 IPR015712 DNA-directed RNA polymerase, subunit 2 CQ11_04820 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type CQ11_04820 IPR042107 DNA-directed RNA polymerase, beta subunit, external 1 domain superfamily CQ11_04820 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily CQ11_04820 IPR014724 RNA polymerase Rpb2, OB-fold CQ11_04820 IPR037034 RNA polymerase Rpb2, domain 2 superfamily CQ11_04820 IPR007645 RNA polymerase Rpb2, domain 3 CQ11_04820 IPR007641 RNA polymerase Rpb2, domain 7 CQ11_04820 IPR007644 RNA polymerase, beta subunit, protrusion CQ11_04825 IPR000206 Ribosomal protein L7/L12 CQ11_04825 IPR013823 Ribosomal protein L7/L12, C-terminal CQ11_04825 IPR008932 Ribosomal protein L7/L12, oligomerisation CQ11_04825 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily CQ11_04825 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like CQ11_04830 IPR001790 Ribosomal protein L10P CQ11_04830 IPR002363 Ribosomal protein L10, eubacterial, conserved site CQ11_04830 IPR022973 Ribosomal protein L10 CQ11_04835 IPR026008 Uridine kinase CQ11_04835 IPR006083 Phosphoribulokinase/uridine kinase CQ11_04835 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_04835 IPR000764 Uridine kinase-like CQ11_04845 IPR023673 Ribosomal protein L1, conserved site CQ11_04845 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich CQ11_04845 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein CQ11_04845 IPR023674 Ribosomal protein L1-like CQ11_04845 IPR002143 Ribosomal protein L1 CQ11_04845 IPR005878 Ribosomal protein L1, bacterial-type CQ11_04850 IPR020783 Ribosomal protein L11, C-terminal CQ11_04850 IPR006519 Ribosomal protein L11, bacterial-type CQ11_04850 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily CQ11_04850 IPR020785 Ribosomal protein L11, conserved site CQ11_04850 IPR036769 Ribosomal protein L11, C-terminal domain superfamily CQ11_04850 IPR020784 Ribosomal protein L11, N-terminal CQ11_04850 IPR000911 Ribosomal protein L11/L12 CQ11_04855 IPR014722 Ribosomal protein L2, domain 2 CQ11_04855 IPR001062 Transcription antitermination protein, NusG CQ11_04855 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site CQ11_04855 IPR008991 Translation protein SH3-like domain superfamily CQ11_04855 IPR005824 KOW CQ11_04855 IPR006645 NusG, N-terminal CQ11_04855 IPR036735 NusG, N-terminal domain superfamily CQ11_04860 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit CQ11_04860 IPR005807 SecE subunit of protein translocation complex, bacterial-like CQ11_04860 IPR038379 SecE superfamily CQ11_04870 IPR004839 Aminotransferase, class I/classII CQ11_04870 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CQ11_04870 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site CQ11_04870 IPR015424 Pyridoxal phosphate-dependent transferase CQ11_04870 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CQ11_04880 IPR006330 Adenosine/adenine deaminase CQ11_04880 IPR001365 Adenosine/AMP deaminase domain CQ11_04880 IPR032466 Metal-dependent hydrolase CQ11_04880 IPR006650 Adenosine/AMP deaminase active site CQ11_04895 IPR006094 FAD linked oxidase, N-terminal CQ11_04895 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily CQ11_04895 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal CQ11_04895 IPR016169 FAD-binding, type PCMH, subdomain 2 CQ11_04895 IPR016167 FAD-binding, type PCMH, subdomain 1 CQ11_04895 IPR036318 FAD-binding, type PCMH-like superfamily CQ11_04895 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase CQ11_04895 IPR016166 FAD-binding domain, PCMH-type CQ11_04905 IPR038584 Ribosomal protein L33 superfamily CQ11_04905 IPR001705 Ribosomal protein L33 CQ11_04905 IPR011332 Zinc-binding ribosomal protein CQ11_04905 IPR018264 Ribosomal protein L33, conserved site CQ11_04925 IPR035571 UPF0234-like, C-terminal CQ11_04925 IPR007551 Protein of unknown function DUF520 CQ11_04925 IPR036183 YajQ-like superfamily CQ11_04925 IPR035570 UPF0234, N-terminal CQ11_04930 IPR036188 FAD/NAD(P)-binding domain superfamily CQ11_04930 IPR021163 Ferredoxin-NADP+ reductase, adrenodoxin-type CQ11_04930 IPR023753 FAD/NAD(P)-binding domain CQ11_04935 IPR032528 Sigma 54 modulation/S30EA ribosomal protein, C-terminal CQ11_04935 IPR036567 Ribosome hibernation promotion factor-like CQ11_04935 IPR003489 Ribosome hibernation promoting factor/RaiA CQ11_04935 IPR034694 Ribosome hibernation promoting factor, long/plastid CQ11_04935 IPR038416 Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain superfamily CQ11_04940 IPR005764 Adenine phosphoribosyl transferase CQ11_04940 IPR000836 Phosphoribosyltransferase domain CQ11_04940 IPR029057 Phosphoribosyltransferase-like CQ11_04945 IPR019606 GerMN domain CQ11_04945 IPR023959 Lipoprotein LpqB CQ11_04945 IPR018910 Lipoprotein LpqB, beta-propeller domain, C-terminal CQ11_04950 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CQ11_04950 IPR003660 HAMP domain CQ11_04950 IPR003594 Histidine kinase/HSP90-like ATPase CQ11_04950 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CQ11_04950 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CQ11_04950 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CQ11_04950 IPR005467 Histidine kinase domain CQ11_04955 IPR036388 Winged helix-like DNA-binding domain superfamily CQ11_04955 IPR039420 Transcriptional regulatory protein WalR-like CQ11_04955 IPR001789 Signal transduction response regulator, receiver domain CQ11_04955 IPR001867 OmpR/PhoB-type DNA-binding domain CQ11_04955 IPR011006 CheY-like superfamily CQ11_04975 IPR011703 ATPase, AAA-3 CQ11_04975 IPR041628 ChlI/MoxR, AAA lid domain CQ11_04975 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_05015 IPR034768 WhiB-like iron-sulfur binding domain CQ11_05015 IPR003482 Transcription factor WhiB CQ11_05020 IPR020550 Inositol monophosphatase, conserved site CQ11_05020 IPR022337 Inositol monophosphatase, SuhB CQ11_05020 IPR033942 Inositol monophosphatase CQ11_05020 IPR000760 Inositol monophosphatase-like CQ11_05020 IPR020583 Inositol monophosphatase, metal-binding site CQ11_05035 IPR029044 Nucleotide-diphospho-sugar transferases CQ11_05035 IPR005835 Nucleotidyl transferase domain CQ11_05035 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form CQ11_05040 IPR029903 RmlD-like substrate binding domain CQ11_05040 IPR036291 NAD(P)-binding domain superfamily CQ11_05040 IPR005913 dTDP-4-dehydrorhamnose reductase family CQ11_05060 IPR029044 Nucleotide-diphospho-sugar transferases CQ11_05060 IPR001296 Glycosyl transferase, family 1 CQ11_05060 IPR001173 Glycosyltransferase 2-like CQ11_05070 IPR029439 Wzt, C-terminal CQ11_05070 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_05070 IPR003439 ABC transporter-like CQ11_05070 IPR003593 AAA+ ATPase domain CQ11_05080 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CQ11_05080 IPR036291 NAD(P)-binding domain superfamily CQ11_05080 IPR017476 UDP-glucose/GDP-mannose dehydrogenase CQ11_05080 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal CQ11_05080 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily CQ11_05080 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation CQ11_05080 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal CQ11_05080 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase CQ11_05095 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain CQ11_05095 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like CQ11_05130 IPR000683 Oxidoreductase, N-terminal CQ11_05130 IPR036291 NAD(P)-binding domain superfamily CQ11_05130 IPR030827 Inositol 2-dehydrogenase CQ11_05130 IPR004104 Oxidoreductase, C-terminal CQ11_05135 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CQ11_05135 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CQ11_05135 IPR015424 Pyridoxal phosphate-dependent transferase CQ11_05135 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CQ11_05140 IPR001451 Hexapeptide repeat CQ11_05140 IPR011004 Trimeric LpxA-like superfamily CQ11_05155 IPR036291 NAD(P)-binding domain superfamily CQ11_05155 IPR016040 NAD(P)-binding domain CQ11_05155 IPR005888 dTDP-glucose 4,6-dehydratase CQ11_05165 IPR001296 Glycosyl transferase, family 1 CQ11_05165 IPR001173 Glycosyltransferase 2-like CQ11_05165 IPR029044 Nucleotide-diphospho-sugar transferases CQ11_05170 IPR004474 Cell envelope-related transcriptional attenuator domain CQ11_05175 IPR004474 Cell envelope-related transcriptional attenuator domain CQ11_05185 IPR003594 Histidine kinase/HSP90-like ATPase CQ11_05185 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CQ11_05185 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CQ11_05185 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CQ11_05185 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CQ11_05185 IPR003660 HAMP domain CQ11_05185 IPR005467 Histidine kinase domain CQ11_05190 IPR039420 Transcriptional regulatory protein WalR-like CQ11_05190 IPR016032 Signal transduction response regulator, C-terminal effector CQ11_05190 IPR001867 OmpR/PhoB-type DNA-binding domain CQ11_05190 IPR036388 Winged helix-like DNA-binding domain superfamily CQ11_05190 IPR011006 CheY-like superfamily CQ11_05190 IPR001789 Signal transduction response regulator, receiver domain CQ11_05195 IPR029787 Nucleotide cyclase CQ11_05195 IPR032026 Adenylate cyclase regulatory domain CQ11_05195 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase CQ11_05205 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein CQ11_05205 IPR029001 Inosine triphosphate pyrophosphatase-like CQ11_05215 IPR019810 Citrate synthase active site CQ11_05215 IPR002020 Citrate synthase CQ11_05215 IPR016143 Citrate synthase-like, small alpha subdomain CQ11_05215 IPR024176 Citrate synthase, bacterial-type CQ11_05215 IPR016142 Citrate synthase-like, large alpha subdomain CQ11_05215 IPR010953 Citrate synthase, type I CQ11_05215 IPR036969 Citrate synthase superfamily CQ11_05220 IPR004839 Aminotransferase, class I/classII CQ11_05220 IPR019880 4-dedimethylamino-4-oxo-anhydrotetracycline transaminase OxyQ CQ11_05220 IPR015424 Pyridoxal phosphate-dependent transferase CQ11_05220 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CQ11_05220 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CQ11_05225 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CQ11_05225 IPR000813 7Fe ferredoxin CQ11_05225 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CQ11_05250 IPR036640 ABC transporter type 1, transmembrane domain superfamily CQ11_05250 IPR003593 AAA+ ATPase domain CQ11_05250 IPR011527 ABC transporter type 1, transmembrane domain CQ11_05250 IPR039421 Type I protein exporter CQ11_05250 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_05250 IPR017871 ABC transporter, conserved site CQ11_05250 IPR003439 ABC transporter-like CQ11_05255 IPR003593 AAA+ ATPase domain CQ11_05255 IPR011527 ABC transporter type 1, transmembrane domain CQ11_05255 IPR003439 ABC transporter-like CQ11_05255 IPR039421 Type I protein exporter CQ11_05255 IPR036640 ABC transporter type 1, transmembrane domain superfamily CQ11_05255 IPR017871 ABC transporter, conserved site CQ11_05255 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_05265 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal CQ11_05265 IPR017871 ABC transporter, conserved site CQ11_05265 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_05265 IPR003593 AAA+ ATPase domain CQ11_05265 IPR003439 ABC transporter-like CQ11_05270 IPR035906 MetI-like superfamily CQ11_05270 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CQ11_05270 IPR025966 Oligopeptide transport permease C-like, N-terminal domain CQ11_05275 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CQ11_05275 IPR035906 MetI-like superfamily CQ11_05280 IPR020605 Octanoyltransferase, conserved site CQ11_05280 IPR000544 Octanoyltransferase CQ11_05280 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain CQ11_05285 IPR013785 Aldolase-type TIM barrel CQ11_05285 IPR006638 Elp3/MiaB/NifB CQ11_05285 IPR003698 Lipoyl synthase CQ11_05285 IPR007197 Radical SAM CQ11_05290 IPR020845 AMP-binding, conserved site CQ11_05290 IPR000873 AMP-dependent synthetase/ligase CQ11_05290 IPR025110 AMP-binding enzyme, C-terminal domain CQ11_05290 IPR042099 AMP-dependent synthetase-like superfamily CQ11_05295 IPR022984 M18 family aminopeptidase 2, putative CQ11_05295 IPR001948 Peptidase M18 CQ11_05295 IPR023358 Peptidase M18, domain 2 CQ11_05310 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric CQ11_05315 IPR007272 Sulphur transport domain CQ11_05320 IPR036868 TusA-like domain superfamily CQ11_05320 IPR001455 TusA-like domain CQ11_05330 IPR013780 Glycosyl hydrolase, all-beta CQ11_05330 IPR000322 Glycoside hydrolase family 31 CQ11_05330 IPR025887 Glycoside hydrolase family 31, N-terminal domain CQ11_05330 IPR017853 Glycoside hydrolase superfamily CQ11_05330 IPR011013 Galactose mutarotase-like domain superfamily CQ11_05340 IPR035906 MetI-like superfamily CQ11_05340 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CQ11_05345 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CQ11_05345 IPR035906 MetI-like superfamily CQ11_05350 IPR000600 ROK family CQ11_05350 IPR036388 Winged helix-like DNA-binding domain superfamily CQ11_05350 IPR036390 Winged helix DNA-binding domain superfamily CQ11_05375 IPR035906 MetI-like superfamily CQ11_05375 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CQ11_05380 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_05380 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit CQ11_05380 IPR013611 Transport-associated OB, type 2 CQ11_05380 IPR003439 ABC transporter-like CQ11_05380 IPR017871 ABC transporter, conserved site CQ11_05380 IPR003593 AAA+ ATPase domain CQ11_05380 IPR008995 Molybdate/tungstate binding, C-terminal CQ11_05380 IPR017879 ABC transporter, spermidine/putrescine import ATP-binding protein, PotA CQ11_05385 IPR026045 Ferric binding protein CQ11_05410 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal CQ11_05410 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_05410 IPR017871 ABC transporter, conserved site CQ11_05410 IPR003439 ABC transporter-like CQ11_05410 IPR003593 AAA+ ATPase domain CQ11_05415 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_05415 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal CQ11_05415 IPR017871 ABC transporter, conserved site CQ11_05415 IPR003439 ABC transporter-like CQ11_05415 IPR003593 AAA+ ATPase domain CQ11_05425 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CQ11_05425 IPR035906 MetI-like superfamily CQ11_05430 IPR030678 Peptide/nickel binding protein, MppA-type CQ11_05430 IPR039424 Solute-binding protein family 5 CQ11_05430 IPR000914 Solute-binding protein family 5 domain CQ11_05435 IPR023999 Formate transporter FocA, putative CQ11_05435 IPR024002 Formate/nitrite transporter, conserved site CQ11_05435 IPR000292 Formate/nitrite transporter CQ11_05435 IPR023271 Aquaporin-like CQ11_05445 IPR036821 Peptide deformylase superfamily CQ11_05445 IPR023635 Peptide deformylase CQ11_05450 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L CQ11_05450 IPR036019 Gated mechanosensitive channel CQ11_05450 IPR019823 Large-conductance mechanosensitive channel, conserved site CQ11_05450 IPR001185 Large-conductance mechanosensitive channel CQ11_05475 IPR016181 Acyl-CoA N-acyltransferase CQ11_05475 IPR000182 GNAT domain CQ11_05475 IPR036390 Winged helix DNA-binding domain superfamily CQ11_05475 IPR000835 MarR-type HTH domain CQ11_05475 IPR036388 Winged helix-like DNA-binding domain superfamily CQ11_05480 IPR004465 Ribonucleotide reductase Class Ib, NrdI CQ11_05480 IPR029039 Flavoprotein-like superfamily CQ11_05480 IPR020852 Ribonucleotide reductase, class Ib, NrdI, bacterial CQ11_05485 IPR000358 Ribonucleotide reductase small subunit family CQ11_05485 IPR030475 Ribonucleotide reductase small subunit, acitve site CQ11_05485 IPR033909 Ribonucleotide reductase small subunit CQ11_05485 IPR026494 Ribonucleoside reductase subunit beta, NrdF CQ11_05485 IPR012348 Ribonucleotide reductase-like CQ11_05485 IPR009078 Ferritin-like superfamily CQ11_05490 IPR029039 Flavoprotein-like superfamily CQ11_05490 IPR005025 NADPH-dependent FMN reductase-like CQ11_05495 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CQ11_05495 IPR001647 DNA-binding HTH domain, TetR-type CQ11_05495 IPR009057 Homeobox-like domain superfamily CQ11_05500 IPR005829 Sugar transporter, conserved site CQ11_05500 IPR036292 Proline/betaine transporter ProP, C-terminal CQ11_05500 IPR015041 Osmosensory transporter coiled coil CQ11_05500 IPR036259 MFS transporter superfamily CQ11_05500 IPR004736 MFS transporter, metabolite:H symporter CQ11_05500 IPR020846 Major facilitator superfamily domain CQ11_05500 IPR005828 Major facilitator, sugar transporter-like CQ11_05510 IPR033195 Glycine/inosamine-phosphate amidinotransferase CQ11_05515 IPR003964 Carbamate kinase CQ11_05515 IPR001048 Aspartate/glutamate/uridylate kinase CQ11_05515 IPR036393 Acetylglutamate kinase-like superfamily CQ11_05520 IPR002292 Ornithine/putrescine carbamoyltransferase CQ11_05520 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding CQ11_05520 IPR006130 Aspartate/ornithine carbamoyltransferase CQ11_05520 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily CQ11_05520 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain CQ11_05520 IPR024904 Ornithine carbamoyltransferase CQ11_05525 IPR003876 Arginine deiminase CQ11_05530 IPR000843 LacI-type HTH domain CQ11_05530 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CQ11_05530 IPR028082 Periplasmic binding protein-like I CQ11_05535 IPR013780 Glycosyl hydrolase, all-beta CQ11_05535 IPR017853 Glycoside hydrolase superfamily CQ11_05535 IPR013783 Immunoglobulin-like fold CQ11_05535 IPR006047 Glycosyl hydrolase, family 13, catalytic domain CQ11_05535 IPR004185 Glycoside hydrolase, family 13, N-terminal Ig-like domain CQ11_05535 IPR032091 Maltogenic Amylase, C-terminal CQ11_05540 IPR030165 sn-Glycerol-3-phosphate transport system permease protein UgpE CQ11_05540 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CQ11_05540 IPR035906 MetI-like superfamily CQ11_05545 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CQ11_05545 IPR035906 MetI-like superfamily CQ11_05550 IPR006061 Solute-binding family 1, conserved site CQ11_05550 IPR006059 Bacterial extracellular solute-binding protein CQ11_05555 IPR013780 Glycosyl hydrolase, all-beta CQ11_05555 IPR006047 Glycosyl hydrolase, family 13, catalytic domain CQ11_05555 IPR017853 Glycoside hydrolase superfamily CQ11_05560 IPR011701 Major facilitator superfamily CQ11_05560 IPR020846 Major facilitator superfamily domain CQ11_05560 IPR036259 MFS transporter superfamily CQ11_05565 IPR002933 Peptidase M20 CQ11_05565 IPR036264 Bacterial exopeptidase dimerisation domain CQ11_05565 IPR017439 Amidohydrolase CQ11_05565 IPR011650 Peptidase M20, dimerisation domain CQ11_05570 IPR005829 Sugar transporter, conserved site CQ11_05570 IPR004736 MFS transporter, metabolite:H symporter CQ11_05570 IPR036259 MFS transporter superfamily CQ11_05570 IPR005828 Major facilitator, sugar transporter-like CQ11_05570 IPR020846 Major facilitator superfamily domain CQ11_05570 IPR011701 Major facilitator superfamily CQ11_05610 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_05610 IPR041706 YchF, N-terminal CQ11_05610 IPR012676 TGS-like CQ11_05610 IPR023192 TGS-like domain superfamily CQ11_05610 IPR004095 TGS CQ11_05610 IPR031167 OBG-type guanine nucleotide-binding (G) domain CQ11_05610 IPR012675 Beta-grasp domain superfamily CQ11_05610 IPR006073 GTP binding domain CQ11_05610 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 CQ11_05610 IPR013029 YchF, C-terminal domain CQ11_05615 IPR003798 DNA recombination RmuC CQ11_05620 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase CQ11_05625 IPR003753 Exonuclease VII, large subunit CQ11_05625 IPR020579 Exonuclease VII, large subunit, C-terminal CQ11_05625 IPR025824 OB-fold nucleic acid binding domain CQ11_05630 IPR003761 Exonuclease VII, small subunit CQ11_05630 IPR037004 Exonuclease VII, small subunit superfamily CQ11_05635 IPR029056 Ribokinase-like CQ11_05635 IPR022841 5-dehydro-2-deoxygluconokinase, Firmicutes CQ11_05635 IPR030830 5-Dehydro-2-deoxygluconokinase CQ11_05635 IPR023314 5-Dehydro-2-deoxygluconokinase-like superfamily CQ11_05635 IPR011611 Carbohydrate kinase PfkB CQ11_05635 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site CQ11_05640 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site CQ11_05640 IPR036424 Decaprenyl diphosphate synthase-like superfamily CQ11_05640 IPR001441 Decaprenyl diphosphate synthase-like CQ11_05645 IPR005744 Hly-III CQ11_05645 IPR004254 AdipoR/Haemolysin-III-related CQ11_05650 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related CQ11_05650 IPR017811 Mycothiol S-conjugate amidase Mca CQ11_05650 IPR024078 Putative deacetylase LmbE-like domain superfamily CQ11_05655 IPR028624 Transcription elongation factor GreA/GreB CQ11_05655 IPR018151 Transcription elongation factor, GreA/GreB, conserved site CQ11_05655 IPR006359 Transcription elongation factor GreA CQ11_05655 IPR023459 Transcription elongation factor GreA/GreB family CQ11_05655 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal CQ11_05655 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal CQ11_05655 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily CQ11_05655 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily CQ11_05660 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily CQ11_05660 IPR002569 Peptide methionine sulphoxide reductase MsrA CQ11_05675 IPR038377 Sodium/glucose symporter superfamily CQ11_05675 IPR018212 Sodium/solute symporter, conserved site CQ11_05675 IPR011851 Sodium/proline symporter CQ11_05675 IPR001734 Sodium/solute symporter CQ11_05680 IPR015590 Aldehyde dehydrogenase domain CQ11_05680 IPR005932 1-pyrroline-5-carboxylate dehydrogenase CQ11_05680 IPR016162 Aldehyde dehydrogenase, N-terminal CQ11_05680 IPR029510 Aldehyde dehydrogenase, glutamic acid active site CQ11_05680 IPR016160 Aldehyde dehydrogenase, cysteine active site CQ11_05680 IPR016163 Aldehyde dehydrogenase, C-terminal CQ11_05680 IPR016161 Aldehyde/histidinol dehydrogenase CQ11_05695 IPR003593 AAA+ ATPase domain CQ11_05695 IPR003439 ABC transporter-like CQ11_05695 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_05700 IPR036388 Winged helix-like DNA-binding domain superfamily CQ11_05700 IPR036390 Winged helix DNA-binding domain superfamily CQ11_05700 IPR000524 Transcription regulator HTH, GntR CQ11_05715 IPR003439 ABC transporter-like CQ11_05715 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_05715 IPR017871 ABC transporter, conserved site CQ11_05715 IPR003593 AAA+ ATPase domain CQ11_05730 IPR004670 Na+/H+ antiporter NhaA CQ11_05730 IPR023171 Na/H antiporter domain superfamily CQ11_05735 IPR003695 Ppx/GppA phosphatase CQ11_05750 IPR036849 Enolase-like, C-terminal domain superfamily CQ11_05750 IPR029017 Enolase-like, N-terminal CQ11_05750 IPR020810 Enolase, C-terminal TIM barrel domain CQ11_05750 IPR020809 Enolase, conserved site CQ11_05750 IPR020811 Enolase, N-terminal CQ11_05750 IPR000941 Enolase CQ11_05755 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain CQ11_05755 IPR036452 Ribonucleoside hydrolase-like CQ11_05755 IPR015910 Inosine/uridine-preferring nucleoside hydrolase, conserved site CQ11_05755 IPR022977 Pyrimidine-specific ribonucleoside hydrolase RihB CQ11_05755 IPR023186 Inosine/uridine-preferring nucleoside hydrolase CQ11_05760 IPR037235 TRCF-like, C-terminal domain CQ11_05760 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_05760 IPR004576 Transcription-repair coupling factor CQ11_05760 IPR001650 Helicase, C-terminal CQ11_05760 IPR003711 CarD-like/TRCF domain CQ11_05760 IPR014001 Helicase superfamily 1/2, ATP-binding domain CQ11_05760 IPR011545 DEAD/DEAH box helicase domain CQ11_05760 IPR005118 Transcription-repair-coupling factor, C-terminal domain CQ11_05760 IPR041471 UvrB, interaction domain CQ11_05760 IPR036101 CarD-like/TRCF domain superfamily CQ11_05765 IPR036416 Peptidyl-tRNA hydrolase superfamily CQ11_05765 IPR018171 Peptidyl-tRNA hydrolase, conserved site CQ11_05765 IPR001328 Peptidyl-tRNA hydrolase CQ11_05770 IPR029751 Ribosomal protein L25 CQ11_05770 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily CQ11_05770 IPR020057 Ribosomal protein L25, beta domain CQ11_05770 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal CQ11_05770 IPR037121 Ribosomal protein L25, C-terminal CQ11_05770 IPR001021 Ribosomal protein L25, long-form CQ11_05775 IPR005946 Ribose-phosphate pyrophosphokinase CQ11_05775 IPR029057 Phosphoribosyltransferase-like CQ11_05775 IPR000836 Phosphoribosyltransferase domain CQ11_05775 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain CQ11_05775 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site CQ11_05775 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type CQ11_05780 IPR025877 MobA-like NTP transferase CQ11_05780 IPR011004 Trimeric LpxA-like superfamily CQ11_05780 IPR029044 Nucleotide-diphospho-sugar transferases CQ11_05780 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase CQ11_05780 IPR038009 GlmU, C-terminal LbH domain CQ11_05780 IPR001451 Hexapeptide repeat CQ11_05790 IPR001647 DNA-binding HTH domain, TetR-type CQ11_05790 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CQ11_05790 IPR009057 Homeobox-like domain superfamily CQ11_05805 IPR025302 Domain of unknown function DUF4162 CQ11_05805 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_05805 IPR017871 ABC transporter, conserved site CQ11_05805 IPR003439 ABC transporter-like CQ11_05805 IPR003593 AAA+ ATPase domain CQ11_05820 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily CQ11_05820 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_05820 IPR017871 ABC transporter, conserved site CQ11_05820 IPR003439 ABC transporter-like CQ11_05820 IPR032781 ABC-transporter extension domain CQ11_05820 IPR032524 ABC transporter Uup, C-terminal CQ11_05820 IPR003593 AAA+ ATPase domain CQ11_05825 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CQ11_05825 IPR006204 GHMP kinase N-terminal domain CQ11_05825 IPR020568 Ribosomal protein S5 domain 2-type fold CQ11_05825 IPR013750 GHMP kinase, C-terminal domain CQ11_05825 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase CQ11_05825 IPR036554 GHMP kinase, C-terminal domain superfamily CQ11_05830 IPR011530 Ribosomal RNA adenine dimethylase CQ11_05830 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm CQ11_05830 IPR023165 rRNA adenine dimethylase-like CQ11_05830 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site CQ11_05830 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal CQ11_05830 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CQ11_05845 IPR032466 Metal-dependent hydrolase CQ11_05845 IPR015991 Uncharacterised hydrolase TatD-type CQ11_05845 IPR001130 TatD family CQ11_05845 IPR018228 Deoxyribonuclease, TatD-related, conserved site CQ11_05850 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CQ11_05850 IPR014758 Methionyl-tRNA synthetase CQ11_05850 IPR041872 Methionyl-tRNA synthetase, anticodon-binding domain CQ11_05850 IPR023458 Methionine-tRNA ligase, type 1 CQ11_05850 IPR015413 Methionyl/Leucyl tRNA synthetase CQ11_05850 IPR033911 Methioninyl-tRNA synthetase core domain CQ11_05850 IPR029038 Methionyl-tRNA synthetase, Zn-domain CQ11_05850 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding CQ11_05860 IPR012337 Ribonuclease H-like superfamily CQ11_05860 IPR001584 Integrase, catalytic core CQ11_05860 IPR038965 Transposase InsF-like CQ11_05860 IPR025948 HTH-like domain CQ11_05860 IPR036397 Ribonuclease H superfamily CQ11_05885 IPR001270 ClpA/B family CQ11_05885 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein CQ11_05885 IPR002611 IstB-like ATP-binding protein CQ11_05885 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_05885 IPR003593 AAA+ ATPase domain CQ11_05900 IPR000868 Isochorismatase-like CQ11_05900 IPR036380 Isochorismatase-like superfamily CQ11_05905 IPR008189 rRNA small subunit methyltransferase I CQ11_05905 IPR014776 Tetrapyrrole methylase, subdomain 2 CQ11_05905 IPR035996 Tetrapyrrole methylase superfamily CQ11_05905 IPR000878 Tetrapyrrole methylase CQ11_05905 IPR018063 SAM-dependent methyltransferase RsmI, conserved site CQ11_05905 IPR014777 Tetrapyrrole methylase, subdomain 1 CQ11_05920 IPR032421 Protein O-mannosyl-transferase, C-terminal four TM domain CQ11_05920 IPR003342 Glycosyl transferase family 39/83 CQ11_05920 IPR027005 Glycosyltransferase 39-like CQ11_05925 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CQ11_05925 IPR015424 Pyridoxal phosphate-dependent transferase CQ11_05925 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase CQ11_05925 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme CQ11_05925 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CQ11_05945 IPR003439 ABC transporter-like CQ11_05945 IPR017871 ABC transporter, conserved site CQ11_05945 IPR025302 Domain of unknown function DUF4162 CQ11_05945 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_05945 IPR003593 AAA+ ATPase domain CQ11_05960 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CQ11_05960 IPR007848 Methyltransferase small domain CQ11_05960 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CQ11_05960 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD CQ11_05965 IPR000060 BCCT transporter family CQ11_05965 IPR018093 BCCT transporter, conserved site CQ11_05970 IPR002549 Transmembrane protein TqsA-like CQ11_05985 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type CQ11_05985 IPR031553 Lysyl-tRNA synthetase, N-terminal transmembrane region CQ11_05985 IPR024320 Phosphatidylglycerol lysyltransferase, C-terminal CQ11_05985 IPR012340 Nucleic acid-binding, OB-fold CQ11_05985 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) CQ11_05985 IPR002313 Lysine-tRNA ligase, class II CQ11_05985 IPR006195 Aminoacyl-tRNA synthetase, class II CQ11_05985 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal CQ11_05990 IPR003804 L-lactate permease CQ11_05995 IPR004017 Cysteine-rich domain CQ11_05995 IPR022822 Lactate utilization protein A CQ11_06000 IPR004452 4Fe-4S binding protein CQ11_06000 IPR024569 4Fe-4S binding protein, C-terminal CQ11_06000 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CQ11_06000 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CQ11_06000 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily CQ11_06000 IPR022825 Lactate utilization protein B CQ11_06000 IPR003741 LUD domain CQ11_06000 IPR009051 Alpha-helical ferredoxin CQ11_06000 IPR037171 NagB/RpiA transferase-like CQ11_06005 IPR037171 NagB/RpiA transferase-like CQ11_06005 IPR003741 LUD domain CQ11_06005 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily CQ11_06025 IPR002114 Phosphotransferase system, HPr serine phosphorylation site CQ11_06025 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site CQ11_06025 IPR035895 HPr-like superfamily CQ11_06025 IPR000032 Phosphocarrier protein HPr-like CQ11_06030 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 CQ11_06030 IPR011055 Duplicated hybrid motif CQ11_06035 IPR013013 Phosphotransferase system, EIIC component, type 1 CQ11_06035 IPR001996 Phosphotransferase system, IIB component, type 1 CQ11_06035 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component CQ11_06035 IPR003352 Phosphotransferase system, EIIC CQ11_06035 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site CQ11_06035 IPR036878 Glucose permease domain IIB CQ11_06055 IPR000086 NUDIX hydrolase domain CQ11_06055 IPR015797 NUDIX hydrolase-like domain superfamily CQ11_06065 IPR023151 PEP-utilising enzyme, conserved site CQ11_06065 IPR036637 Phosphohistidine domain superfamily CQ11_06065 IPR024692 Phosphotransferase system, enzyme I CQ11_06065 IPR040442 Pyruvate kinase-like domain superfamily CQ11_06065 IPR008731 Phosphotransferase system, enzyme I N-terminal CQ11_06065 IPR036618 PtsI, HPr-binding domain superfamily CQ11_06065 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily CQ11_06065 IPR008279 PEP-utilising enzyme, mobile domain CQ11_06065 IPR018274 PEP-utilising enzyme, active site CQ11_06065 IPR006318 Phosphotransferase system, enzyme I-like CQ11_06065 IPR000121 PEP-utilising enzyme, C-terminal CQ11_06075 IPR036634 PRD domain superfamily CQ11_06075 IPR001550 Transcription antiterminator, conserved site CQ11_06075 IPR011608 PRD domain CQ11_06075 IPR036650 CAT RNA-binding domain superfamily CQ11_06075 IPR004341 CAT RNA-binding domain CQ11_06080 IPR036878 Glucose permease domain IIB CQ11_06080 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 CQ11_06080 IPR011055 Duplicated hybrid motif CQ11_06080 IPR003352 Phosphotransferase system, EIIC CQ11_06080 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site CQ11_06080 IPR013013 Phosphotransferase system, EIIC component, type 1 CQ11_06080 IPR001996 Phosphotransferase system, IIB component, type 1 CQ11_06090 IPR023908 xxxLxxG heptad repeat CQ11_06090 IPR017501 Phage infection protein, YhgE, C-terminal CQ11_06090 IPR017500 Phage infection protein, YhgE, N-terminal CQ11_06095 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_06095 IPR000595 Cyclic nucleotide-binding domain CQ11_06095 IPR014710 RmlC-like jelly roll fold CQ11_06095 IPR018488 Cyclic nucleotide-binding, conserved site CQ11_06095 IPR017871 ABC transporter, conserved site CQ11_06095 IPR003439 ABC transporter-like CQ11_06095 IPR003593 AAA+ ATPase domain CQ11_06095 IPR018490 Cyclic nucleotide-binding-like CQ11_06100 IPR007841 Uncharacterised protein family UPF0210 CQ11_06105 IPR022986 Uncharacterised protein family UPF0237, ACT-type CQ11_06105 IPR002912 ACT domain CQ11_06110 IPR036259 MFS transporter superfamily CQ11_06110 IPR020846 Major facilitator superfamily domain CQ11_06110 IPR011701 Major facilitator superfamily CQ11_06110 IPR004638 Drug resistance transporter EmrB-like CQ11_06120 IPR035977 Ribosomal protein L36 superfamily CQ11_06120 IPR000473 Ribosomal protein L36 CQ11_06125 IPR034704 L28p-like CQ11_06125 IPR042105 Ribosomal protein L31 superfamily CQ11_06125 IPR027493 Ribosomal protein L31 type B CQ11_06125 IPR002150 Ribosomal protein L31 CQ11_06130 IPR001209 Ribosomal protein S14 CQ11_06130 IPR023036 Ribosomal protein S14, bacterial/plastid CQ11_06135 IPR038584 Ribosomal protein L33 superfamily CQ11_06135 IPR018264 Ribosomal protein L33, conserved site CQ11_06135 IPR011332 Zinc-binding ribosomal protein CQ11_06135 IPR001705 Ribosomal protein L33 CQ11_06140 IPR001383 Ribosomal protein L28 CQ11_06140 IPR037147 Ribosomal protein L28/L24 superfamily CQ11_06140 IPR026569 Ribosomal protein L28/L24 CQ11_06140 IPR034704 L28p-like CQ11_06155 IPR003663 Sugar/inositol transporter CQ11_06155 IPR005828 Major facilitator, sugar transporter-like CQ11_06155 IPR005829 Sugar transporter, conserved site CQ11_06155 IPR036259 MFS transporter superfamily CQ11_06155 IPR020846 Major facilitator superfamily domain CQ11_06160 IPR029058 Alpha/Beta hydrolase fold CQ11_06160 IPR000073 Alpha/beta hydrolase fold-1 CQ11_06160 IPR022742 Serine aminopeptidase, S33 CQ11_06165 IPR036390 Winged helix DNA-binding domain superfamily CQ11_06165 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily CQ11_06165 IPR011663 UbiC transcription regulator-associated CQ11_06165 IPR000524 Transcription regulator HTH, GntR CQ11_06165 IPR036388 Winged helix-like DNA-binding domain superfamily CQ11_06170 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_06170 IPR017871 ABC transporter, conserved site CQ11_06170 IPR003593 AAA+ ATPase domain CQ11_06170 IPR003439 ABC transporter-like CQ11_06175 IPR037294 ABC transporter, BtuC-like CQ11_06175 IPR000522 ABC transporter, permease protein, BtuC-like CQ11_06180 IPR037294 ABC transporter, BtuC-like CQ11_06180 IPR000522 ABC transporter, permease protein, BtuC-like CQ11_06185 IPR002491 ABC transporter periplasmic binding domain CQ11_06200 IPR029058 Alpha/Beta hydrolase fold CQ11_06200 IPR000073 Alpha/beta hydrolase fold-1 CQ11_06200 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase CQ11_06220 IPR014057 Uncharacterized protein HI1420 CQ11_06220 IPR001387 Cro/C1-type helix-turn-helix domain CQ11_06220 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CQ11_06245 IPR036688 MoeA, C-terminal, domain IV superfamily CQ11_06245 IPR036425 MoaB/Mog-like domain superfamily CQ11_06245 IPR001453 MoaB/Mog domain CQ11_06245 IPR038987 Molybdopterin biosynthesis protein MoeA-like CQ11_06245 IPR005111 MoeA, C-terminal, domain IV CQ11_06245 IPR036135 MoeA, N-terminal and linker domain superfamily CQ11_06245 IPR005110 MoeA, N-terminal and linker domain CQ11_06280 IPR006016 UspA CQ11_06280 IPR006015 Universal stress protein A family CQ11_06285 IPR018392 LysM domain CQ11_06285 IPR038765 Papain-like cysteine peptidase superfamily CQ11_06285 IPR000064 Endopeptidase, NLPC/P60 domain CQ11_06285 IPR036779 LysM domain superfamily CQ11_06290 IPR038157 Ferrous iron transporter, core domain CQ11_06290 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily CQ11_06290 IPR001367 Iron dependent repressor, metal binding and dimerisation domain CQ11_06290 IPR007167 Ferrous iron transporter FeoA domain CQ11_06290 IPR040767 Diphteria toxin repressor, SH3 domain CQ11_06290 IPR022689 Iron dependent repressor CQ11_06290 IPR008988 Transcriptional repressor, C-terminal CQ11_06290 IPR036388 Winged helix-like DNA-binding domain superfamily CQ11_06290 IPR036390 Winged helix DNA-binding domain superfamily CQ11_06290 IPR022687 DTXR-type HTH domain CQ11_06295 IPR022278 Phosphoserine aminotransferase CQ11_06295 IPR000192 Aminotransferase class V domain CQ11_06295 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CQ11_06295 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CQ11_06295 IPR015424 Pyridoxal phosphate-dependent transferase CQ11_06295 IPR006272 Phosphoserine aminotransferase, Mycobacterial-type CQ11_06300 IPR006043 Xanthine/uracil/vitamin C permease CQ11_06300 IPR026033 Azaguanine-like transporters CQ11_06305 IPR001250 Mannose-6-phosphate isomerase, type I CQ11_06305 IPR016305 Mannose-6-phosphate isomerase CQ11_06305 IPR018050 Phosphomannose isomerase, type I, conserved site CQ11_06305 IPR014710 RmlC-like jelly roll fold CQ11_06305 IPR011051 RmlC-like cupin domain superfamily CQ11_06310 IPR021391 Protein of unknown function DUF3027 CQ11_06315 IPR012340 Nucleic acid-binding, OB-fold CQ11_06315 IPR002059 Cold-shock protein, DNA-binding CQ11_06315 IPR019844 Cold-shock (CSD) domain CQ11_06315 IPR011129 Cold shock domain CQ11_06315 IPR012156 Cold shock, CspA CQ11_06325 IPR007157 PspA/IM30 CQ11_06335 IPR001867 OmpR/PhoB-type DNA-binding domain CQ11_06335 IPR001789 Signal transduction response regulator, receiver domain CQ11_06335 IPR039420 Transcriptional regulatory protein WalR-like CQ11_06335 IPR011006 CheY-like superfamily CQ11_06335 IPR036388 Winged helix-like DNA-binding domain superfamily CQ11_06340 IPR005467 Histidine kinase domain CQ11_06340 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CQ11_06340 IPR003594 Histidine kinase/HSP90-like ATPase CQ11_06340 IPR003660 HAMP domain CQ11_06340 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CQ11_06340 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CQ11_06340 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CQ11_06345 IPR002123 Phospholipid/glycerol acyltransferase CQ11_06345 IPR042099 AMP-dependent synthetase-like superfamily CQ11_06345 IPR000873 AMP-dependent synthetase/ligase CQ11_06345 IPR023775 Bifunctional protein Aas CQ11_06345 IPR020845 AMP-binding, conserved site CQ11_06350 IPR036291 NAD(P)-binding domain superfamily CQ11_06350 IPR002347 Short-chain dehydrogenase/reductase SDR CQ11_06350 IPR020904 Short-chain dehydrogenase/reductase, conserved site CQ11_06360 IPR027413 GroEL-like equatorial domain superfamily CQ11_06360 IPR027410 TCP-1-like chaperonin intermediate domain superfamily CQ11_06360 IPR002423 Chaperonin Cpn60/TCP-1 family CQ11_06360 IPR001844 Chaperonin Cpn60 CQ11_06360 IPR018370 Chaperonin Cpn60, conserved site CQ11_06360 IPR027409 GroEL-like apical domain superfamily CQ11_06375 IPR036895 Uracil-DNA glycosylase-like domain superfamily CQ11_06375 IPR005122 Uracil-DNA glycosylase-like CQ11_06375 IPR018085 Uracil-DNA glycosylase, active site CQ11_06375 IPR002043 Uracil-DNA glycosylase family 1 CQ11_06405 IPR020472 G-protein beta WD-40 repeat CQ11_06405 IPR011009 Protein kinase-like domain superfamily CQ11_06405 IPR000719 Protein kinase domain CQ11_06405 IPR008271 Serine/threonine-protein kinase, active site CQ11_06405 IPR015943 WD40/YVTN repeat-like-containing domain superfamily CQ11_06405 IPR001680 WD40 repeat CQ11_06405 IPR017441 Protein kinase, ATP binding site CQ11_06405 IPR036322 WD40-repeat-containing domain superfamily CQ11_06405 IPR017986 WD40-repeat-containing domain CQ11_06405 IPR019775 WD40 repeat, conserved site CQ11_06410 IPR017922 sn-Glycerol-3-phosphate import ATP-binding protein UgpC CQ11_06410 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_06410 IPR040582 MalK, OB fold domain CQ11_06410 IPR008995 Molybdate/tungstate binding, C-terminal CQ11_06410 IPR003593 AAA+ ATPase domain CQ11_06410 IPR003439 ABC transporter-like CQ11_06410 IPR017871 ABC transporter, conserved site CQ11_06420 IPR004104 Oxidoreductase, C-terminal CQ11_06420 IPR000683 Oxidoreductase, N-terminal CQ11_06420 IPR036291 NAD(P)-binding domain superfamily CQ11_06430 IPR006059 Bacterial extracellular solute-binding protein CQ11_06440 IPR035906 MetI-like superfamily CQ11_06440 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CQ11_06445 IPR035906 MetI-like superfamily CQ11_06445 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CQ11_06460 IPR012080 Aspartate-semialdehyde dehydrogenase CQ11_06460 IPR012280 Semialdehyde dehydrogenase, dimerisation domain CQ11_06460 IPR000534 Semialdehyde dehydrogenase, NAD-binding CQ11_06460 IPR036291 NAD(P)-binding domain superfamily CQ11_06460 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type CQ11_06460 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site CQ11_06465 IPR002912 ACT domain CQ11_06465 IPR027795 CASTOR, ACT domain CQ11_06465 IPR018042 Aspartate kinase, conserved site CQ11_06465 IPR001341 Aspartate kinase CQ11_06465 IPR001048 Aspartate/glutamate/uridylate kinase CQ11_06465 IPR041740 Aspartokinase catalytic domain CQ11_06465 IPR036393 Acetylglutamate kinase-like superfamily CQ11_06465 IPR005260 Aspartate kinase, monofunctional class CQ11_06470 IPR006171 TOPRIM domain CQ11_06470 IPR034137 RecR, TOPRIM domain CQ11_06470 IPR023628 Recombination protein RecR, C4-type zinc finger CQ11_06470 IPR000093 DNA recombination protein RecR CQ11_06470 IPR023627 Recombination protein RecR CQ11_06470 IPR015967 Recombination protein RecR, conserved site CQ11_06475 IPR003593 AAA+ ATPase domain CQ11_06475 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal CQ11_06475 IPR022754 DNA polymerase III, gamma subunit, domain III CQ11_06475 IPR012763 DNA polymerase III, subunit gamma/ tau CQ11_06475 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_06485 IPR003706 CstA, N-terminal domain CQ11_06485 IPR025299 CstA, C-terminal domain CQ11_06505 IPR019918 Pyrimidine permease RutG, predicted CQ11_06505 IPR006043 Xanthine/uracil/vitamin C permease CQ11_06505 IPR006042 Xanthine/uracil permease CQ11_06520 IPR029064 50S ribosomal protein L30e-like CQ11_06520 IPR001537 tRNA/rRNA methyltransferase, SpoU type CQ11_06520 IPR013123 RNA 2-O ribose methyltransferase, substrate binding CQ11_06520 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CQ11_06520 IPR029028 Alpha/beta knot methyltransferases CQ11_06520 IPR004441 RNA methyltransferase TrmH family CQ11_06525 IPR015803 Cysteine-tRNA ligase CQ11_06525 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR CQ11_06525 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding CQ11_06525 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase CQ11_06525 IPR032678 tRNA synthetases class I, catalytic domain CQ11_06525 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CQ11_06535 IPR003593 AAA+ ATPase domain CQ11_06535 IPR003439 ABC transporter-like CQ11_06535 IPR017871 ABC transporter, conserved site CQ11_06535 IPR015854 ABC transporter, lipoprotein release, LolD CQ11_06535 IPR011924 Lipoprotein releasing system, ATP-binding protein CQ11_06535 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_06540 IPR037171 NagB/RpiA transferase-like CQ11_06540 IPR007324 Sugar-binding domain, putative CQ11_06540 IPR036388 Winged helix-like DNA-binding domain superfamily CQ11_06550 IPR004006 DhaK domain CQ11_06560 IPR036409 Class II aldolase/adducin N-terminal domain superfamily CQ11_06560 IPR001303 Class II aldolase/adducin N-terminal CQ11_06560 IPR004782 L-fucose phosphate aldolase CQ11_06565 IPR013014 Phosphotransferase system, EIIC component, type 2 CQ11_06565 IPR004703 Phosphotransferase system, sugar-specific permease component CQ11_06565 IPR013853 Galactitol permease IIC component CQ11_06595 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase CQ11_06595 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily CQ11_06600 IPR034683 Cytidylyltransferase IspD/TarI CQ11_06600 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site CQ11_06600 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CQ11_06600 IPR029044 Nucleotide-diphospho-sugar transferases CQ11_06610 IPR036388 Winged helix-like DNA-binding domain superfamily CQ11_06610 IPR039420 Transcriptional regulatory protein WalR-like CQ11_06610 IPR001789 Signal transduction response regulator, receiver domain CQ11_06610 IPR016032 Signal transduction response regulator, C-terminal effector CQ11_06610 IPR011006 CheY-like superfamily CQ11_06610 IPR001867 OmpR/PhoB-type DNA-binding domain CQ11_06615 IPR003594 Histidine kinase/HSP90-like ATPase CQ11_06615 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CQ11_06615 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CQ11_06615 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CQ11_06615 IPR005467 Histidine kinase domain CQ11_06615 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CQ11_06620 IPR026022 PhoU domain CQ11_06620 IPR028366 Phosphate transport system protein PhoU CQ11_06620 IPR038078 PhoU-like domain superfamily CQ11_06625 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site CQ11_06625 IPR013078 Histidine phosphatase superfamily, clade-1 CQ11_06625 IPR029033 Histidine phosphatase superfamily CQ11_06625 IPR005952 Phosphoglycerate mutase 1 CQ11_06640 IPR019931 LPXTG cell wall anchor domain CQ11_06640 IPR013783 Immunoglobulin-like fold CQ11_06640 IPR032364 Gram-positive pilin subunit D1, N-terminal CQ11_06640 IPR019948 Gram-positive LPXTG cell wall anchor CQ11_06640 IPR026466 Fimbrial isopeptide formation D2 domain CQ11_06670 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_06670 IPR003593 AAA+ ATPase domain CQ11_06670 IPR017871 ABC transporter, conserved site CQ11_06670 IPR003439 ABC transporter-like CQ11_06675 IPR037294 ABC transporter, BtuC-like CQ11_06675 IPR000522 ABC transporter, permease protein, BtuC-like CQ11_06690 IPR020881 Phosphoglycerol transferase I CQ11_06690 IPR017850 Alkaline-phosphatase-like, core domain superfamily CQ11_06690 IPR000917 Sulfatase, N-terminal CQ11_06695 IPR000917 Sulfatase, N-terminal CQ11_06695 IPR020881 Phosphoglycerol transferase I CQ11_06695 IPR017850 Alkaline-phosphatase-like, core domain superfamily CQ11_06710 IPR033659 Ferrochelatase, N-terminal CQ11_06710 IPR033644 Ferrochelatase, C-terminal CQ11_06710 IPR019772 Ferrochelatase, active site CQ11_06710 IPR001015 Ferrochelatase CQ11_06715 IPR036812 NADP-dependent oxidoreductase domain superfamily CQ11_06715 IPR023210 NADP-dependent oxidoreductase domain CQ11_06725 IPR001381 3-dehydroquinate dehydratase type I CQ11_06725 IPR013785 Aldolase-type TIM barrel CQ11_06755 IPR011703 ATPase, AAA-3 CQ11_06755 IPR041628 ChlI/MoxR, AAA lid domain CQ11_06755 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_06765 IPR025576 YwiC-like protein CQ11_06770 IPR015424 Pyridoxal phosphate-dependent transferase CQ11_06770 IPR024892 Putative phenylalanine aminotransferase CQ11_06770 IPR005861 Histidinol-phosphate aminotransferase family CQ11_06770 IPR004839 Aminotransferase, class I/classII CQ11_06770 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site CQ11_06770 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CQ11_06770 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CQ11_06775 IPR007165 Mycobacterial 4 TMS phage holin, superfamily IV CQ11_06780 IPR024083 Fumarase/histidase, N-terminal CQ11_06780 IPR004769 Adenylosuccinate lyase CQ11_06780 IPR013539 Adenylosuccinate lyase PurB, C-terminal CQ11_06780 IPR000362 Fumarate lyase family CQ11_06780 IPR022761 Fumarate lyase, N-terminal CQ11_06780 IPR008948 L-Aspartase-like CQ11_06780 IPR020557 Fumarate lyase, conserved site CQ11_06785 IPR032816 SNARE associated Golgi protein CQ11_06795 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily CQ11_06795 IPR017969 Heavy-metal-associated, conserved site CQ11_06795 IPR006121 Heavy metal-associated domain, HMA CQ11_06795 IPR036163 Heavy metal-associated domain superfamily CQ11_06795 IPR021179 Mercury(II) reductase CQ11_06795 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CQ11_06795 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site CQ11_06795 IPR023753 FAD/NAD(P)-binding domain CQ11_06795 IPR036188 FAD/NAD(P)-binding domain superfamily CQ11_06795 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I CQ11_06800 IPR023214 HAD superfamily CQ11_06800 IPR006121 Heavy metal-associated domain, HMA CQ11_06800 IPR036163 Heavy metal-associated domain superfamily CQ11_06800 IPR008250 P-type ATPase, A domain superfamily CQ11_06800 IPR000579 Cation-transporting P-type ATPase A/B CQ11_06800 IPR023298 P-type ATPase, transmembrane domain superfamily CQ11_06800 IPR027256 P-type ATPase, subfamily IB CQ11_06800 IPR036412 HAD-like superfamily CQ11_06800 IPR018303 P-type ATPase, phosphorylation site CQ11_06800 IPR017969 Heavy-metal-associated, conserved site CQ11_06800 IPR023299 P-type ATPase, cytoplasmic domain N CQ11_06800 IPR001757 P-type ATPase CQ11_06810 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily CQ11_06810 IPR005843 Alpha-D-phosphohexomutase, C-terminal CQ11_06810 IPR005852 Phosphoglucomutase, alpha-D-glucose specific CQ11_06810 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III CQ11_06810 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II CQ11_06810 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III CQ11_06810 IPR016066 Alpha-D-phosphohexomutase, conserved site CQ11_06810 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I CQ11_06815 IPR041490 HTH-type transcriptional repressor KstR2, C-terminal CQ11_06815 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CQ11_06815 IPR001647 DNA-binding HTH domain, TetR-type CQ11_06815 IPR009057 Homeobox-like domain superfamily CQ11_06815 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CQ11_06820 IPR003593 AAA+ ATPase domain CQ11_06820 IPR011527 ABC transporter type 1, transmembrane domain CQ11_06820 IPR039421 Type I protein exporter CQ11_06820 IPR036640 ABC transporter type 1, transmembrane domain superfamily CQ11_06820 IPR003439 ABC transporter-like CQ11_06820 IPR017871 ABC transporter, conserved site CQ11_06820 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_06825 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_06825 IPR003439 ABC transporter-like CQ11_06825 IPR039421 Type I protein exporter CQ11_06825 IPR003593 AAA+ ATPase domain CQ11_06825 IPR011527 ABC transporter type 1, transmembrane domain CQ11_06825 IPR036640 ABC transporter type 1, transmembrane domain superfamily CQ11_06830 IPR017871 ABC transporter, conserved site CQ11_06830 IPR003593 AAA+ ATPase domain CQ11_06830 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_06830 IPR003439 ABC transporter-like CQ11_06845 IPR013149 Alcohol dehydrogenase, C-terminal CQ11_06845 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site CQ11_06845 IPR011032 GroES-like superfamily CQ11_06845 IPR020843 Polyketide synthase, enoylreductase domain CQ11_06845 IPR036291 NAD(P)-binding domain superfamily CQ11_06845 IPR013154 Alcohol dehydrogenase, N-terminal CQ11_06855 IPR020846 Major facilitator superfamily domain CQ11_06855 IPR036259 MFS transporter superfamily CQ11_06855 IPR000849 Sugar phosphate transporter CQ11_06855 IPR011701 Major facilitator superfamily CQ11_06855 IPR021159 Glycerate/sugar phosphate transporter, conserved site CQ11_06860 IPR000760 Inositol monophosphatase-like CQ11_06860 IPR020583 Inositol monophosphatase, metal-binding site CQ11_06860 IPR020550 Inositol monophosphatase, conserved site CQ11_06865 IPR030159 Autoinducer 2 ABC transporter, substrate-binding protein LsrB CQ11_06865 IPR028082 Periplasmic binding protein-like I CQ11_06865 IPR025997 Periplasmic binding protein CQ11_06870 IPR001851 ABC transporter, permease CQ11_06875 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_06875 IPR003593 AAA+ ATPase domain CQ11_06875 IPR015861 ABC transporter, ribose import, RbsA CQ11_06875 IPR003439 ABC transporter-like CQ11_06875 IPR017871 ABC transporter, conserved site CQ11_06880 IPR036291 NAD(P)-binding domain superfamily CQ11_06880 IPR000683 Oxidoreductase, N-terminal CQ11_06880 IPR004104 Oxidoreductase, C-terminal CQ11_06885 IPR023952 Inosose dehydratase CQ11_06885 IPR030823 IolE/MocC family CQ11_06885 IPR013022 Xylose isomerase-like, TIM barrel domain CQ11_06885 IPR036237 Xylose isomerase-like superfamily CQ11_06890 IPR004104 Oxidoreductase, C-terminal CQ11_06890 IPR036291 NAD(P)-binding domain superfamily CQ11_06890 IPR000683 Oxidoreductase, N-terminal CQ11_06890 IPR030827 Inositol 2-dehydrogenase CQ11_06895 IPR013785 Aldolase-type TIM barrel CQ11_06895 IPR001585 Transaldolase/Fructose-6-phosphate aldolase CQ11_06895 IPR004732 Transaldolase type 2 CQ11_06895 IPR018225 Transaldolase, active site CQ11_06905 IPR030830 5-Dehydro-2-deoxygluconokinase CQ11_06905 IPR011611 Carbohydrate kinase PfkB CQ11_06905 IPR029056 Ribokinase-like CQ11_06905 IPR023314 5-Dehydro-2-deoxygluconokinase-like superfamily CQ11_06905 IPR022841 5-dehydro-2-deoxygluconokinase, Firmicutes CQ11_06905 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site CQ11_06915 IPR011051 RmlC-like cupin domain superfamily CQ11_06915 IPR024203 5-deoxy-glucuronate isomerase, IolB CQ11_06915 IPR014710 RmlC-like jelly roll fold CQ11_06915 IPR021120 KduI/IolB isomerase CQ11_06915 IPR023770 5-deoxy-glucuronate isomerase, Bacilli CQ11_06920 IPR030817 3,5/4-Trihydroxycyclohexa-1,2-dione hydrolase CQ11_06920 IPR029035 DHS-like NAD/FAD-binding domain superfamily CQ11_06920 IPR000399 TPP-binding enzyme, conserved site CQ11_06920 IPR012000 Thiamine pyrophosphate enzyme, central domain CQ11_06920 IPR029061 Thiamin diphosphate-binding fold CQ11_06920 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain CQ11_06920 IPR023757 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase, Firmicutes CQ11_06920 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding CQ11_06925 IPR016161 Aldehyde/histidinol dehydrogenase CQ11_06925 IPR015590 Aldehyde dehydrogenase domain CQ11_06925 IPR010061 Methylmalonate-semialdehyde dehydrogenase CQ11_06925 IPR016162 Aldehyde dehydrogenase, N-terminal CQ11_06925 IPR016163 Aldehyde dehydrogenase, C-terminal CQ11_06925 IPR016160 Aldehyde dehydrogenase, cysteine active site CQ11_06930 IPR017871 ABC transporter, conserved site CQ11_06930 IPR003439 ABC transporter-like CQ11_06930 IPR003593 AAA+ ATPase domain CQ11_06930 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_06935 IPR037294 ABC transporter, BtuC-like CQ11_06935 IPR000522 ABC transporter, permease protein, BtuC-like CQ11_06940 IPR000522 ABC transporter, permease protein, BtuC-like CQ11_06940 IPR037294 ABC transporter, BtuC-like CQ11_06945 IPR002491 ABC transporter periplasmic binding domain CQ11_06950 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding CQ11_06950 IPR006183 6-phosphogluconate dehydrogenase CQ11_06950 IPR006114 6-phosphogluconate dehydrogenase, C-terminal CQ11_06950 IPR013328 6-phosphogluconate dehydrogenase, domain 2 CQ11_06950 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CQ11_06950 IPR036291 NAD(P)-binding domain superfamily CQ11_06950 IPR006184 6-phosphogluconate-binding site CQ11_06950 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating CQ11_06955 IPR004104 Oxidoreductase, C-terminal CQ11_06955 IPR023794 Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase CQ11_06955 IPR000683 Oxidoreductase, N-terminal CQ11_06955 IPR036291 NAD(P)-binding domain superfamily CQ11_06960 IPR006061 Solute-binding family 1, conserved site CQ11_06960 IPR006059 Bacterial extracellular solute-binding protein CQ11_06965 IPR035906 MetI-like superfamily CQ11_06965 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CQ11_06970 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CQ11_06970 IPR035906 MetI-like superfamily CQ11_06975 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site CQ11_06975 IPR013154 Alcohol dehydrogenase, N-terminal CQ11_06975 IPR004627 L-threonine 3-dehydrogenase CQ11_06975 IPR020843 Polyketide synthase, enoylreductase domain CQ11_06975 IPR013149 Alcohol dehydrogenase, C-terminal CQ11_06975 IPR011032 GroES-like superfamily CQ11_06975 IPR036291 NAD(P)-binding domain superfamily CQ11_06980 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase CQ11_06980 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site CQ11_06980 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CQ11_06980 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CQ11_06980 IPR015424 Pyridoxal phosphate-dependent transferase CQ11_06980 IPR004839 Aminotransferase, class I/classII CQ11_06985 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit CQ11_06985 IPR004681 TRAP transporter large membrane protein DctM CQ11_06990 IPR007387 TRAP transporter, small membrane protein DctQ CQ11_06990 IPR004681 TRAP transporter large membrane protein DctM CQ11_06990 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit CQ11_06995 IPR004682 TRAP transporter solute receptor, DctP family CQ11_06995 IPR018389 TRAP transporter solute receptor DctP/TeaA CQ11_06995 IPR038404 TRAP transporter solute receptor DctP superfamily CQ11_07000 IPR003766 Uronate isomerase CQ11_07000 IPR032466 Metal-dependent hydrolase CQ11_07015 IPR005627 Copper homeostasis protein CutC CQ11_07015 IPR023648 Copper homeostasis CutC domain CQ11_07015 IPR036822 Copper homeostasis (CutC) domain superfamily CQ11_07030 IPR036390 Winged helix DNA-binding domain superfamily CQ11_07030 IPR036388 Winged helix-like DNA-binding domain superfamily CQ11_07030 IPR000600 ROK family CQ11_07040 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CQ11_07040 IPR035906 MetI-like superfamily CQ11_07045 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CQ11_07045 IPR035906 MetI-like superfamily CQ11_07045 IPR025966 Oligopeptide transport permease C-like, N-terminal domain CQ11_07050 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal CQ11_07050 IPR017871 ABC transporter, conserved site CQ11_07050 IPR003439 ABC transporter-like CQ11_07050 IPR003593 AAA+ ATPase domain CQ11_07050 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_07055 IPR004654 Glucokinase ROK CQ11_07055 IPR000600 ROK family CQ11_07060 IPR000600 ROK family CQ11_07060 IPR036388 Winged helix-like DNA-binding domain superfamily CQ11_07060 IPR036390 Winged helix DNA-binding domain superfamily CQ11_07070 IPR035906 MetI-like superfamily CQ11_07070 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CQ11_07075 IPR035906 MetI-like superfamily CQ11_07075 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CQ11_07080 IPR035363 Lacto-N-biose phosphorylase, central domain CQ11_07080 IPR012711 Lacto-N-biose phosphorylase/D-galactosyl-beta-1->4-L-rhamnose phosphorylase CQ11_07080 IPR035356 Lacto-N-biose phosphorylase, C-terminal domain CQ11_07080 IPR013783 Immunoglobulin-like fold CQ11_07080 IPR013780 Glycosyl hydrolase, all-beta CQ11_07080 IPR029062 Class I glutamine amidotransferase-like CQ11_07080 IPR035080 Lacto-N-biose phosphorylase-like, N-terminal TIM barrel domain CQ11_07085 IPR002575 Aminoglycoside phosphotransferase CQ11_07085 IPR011009 Protein kinase-like domain superfamily CQ11_07090 IPR000766 Galactose-1-phosphate uridyl transferase, class II CQ11_07090 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal CQ11_07090 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal CQ11_07135 IPR025669 AAA domain CQ11_07135 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_07145 IPR010998 Integrase/recombinase, N-terminal CQ11_07145 IPR004107 Integrase, SAM-like, N-terminal CQ11_07145 IPR011931 Tyrosine recombinase XerC CQ11_07145 IPR011932 Tyrosine recombinase XerD CQ11_07145 IPR023009 Tyrosine recombinase XerC/XerD CQ11_07145 IPR013762 Integrase-like, catalytic domain superfamily CQ11_07145 IPR011010 DNA breaking-rejoining enzyme, catalytic core CQ11_07145 IPR002104 Integrase, catalytic domain CQ11_07155 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_07155 IPR017871 ABC transporter, conserved site CQ11_07155 IPR003439 ABC transporter-like CQ11_07155 IPR036640 ABC transporter type 1, transmembrane domain superfamily CQ11_07155 IPR011527 ABC transporter type 1, transmembrane domain CQ11_07155 IPR003593 AAA+ ATPase domain CQ11_07160 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CQ11_07160 IPR017927 FAD-binding domain, ferredoxin reductase-type CQ11_07160 IPR003593 AAA+ ATPase domain CQ11_07160 IPR011527 ABC transporter type 1, transmembrane domain CQ11_07160 IPR007037 Siderophore-interacting protein, C-terminal domain CQ11_07160 IPR017938 Riboflavin synthase-like beta-barrel CQ11_07160 IPR036640 ABC transporter type 1, transmembrane domain superfamily CQ11_07160 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_07160 IPR017871 ABC transporter, conserved site CQ11_07160 IPR013113 FAD-binding 9, siderophore-interacting CQ11_07160 IPR003439 ABC transporter-like CQ11_07165 IPR003593 AAA+ ATPase domain CQ11_07165 IPR003439 ABC transporter-like CQ11_07165 IPR017871 ABC transporter, conserved site CQ11_07165 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_07170 IPR003339 ABC/ECF transporter, transmembrane component CQ11_07185 IPR001898 Solute carrier family 13 CQ11_07205 IPR000846 Dihydrodipicolinate reductase, N-terminal CQ11_07205 IPR032094 Meso-diaminopimelate D-dehydrogenase, C-terminal CQ11_07205 IPR036291 NAD(P)-binding domain superfamily CQ11_07205 IPR010190 Diaminopimelate dehydrogenase, Ddh CQ11_07210 IPR023756 Glyoxylate/hydroxypyruvate reductase B CQ11_07210 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain CQ11_07210 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CQ11_07210 IPR036291 NAD(P)-binding domain superfamily CQ11_07210 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CQ11_07215 IPR030281 Autoinducer 2 import ATP-binding protein LsrA CQ11_07215 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_07215 IPR017871 ABC transporter, conserved site CQ11_07215 IPR003439 ABC transporter-like CQ11_07215 IPR003593 AAA+ ATPase domain CQ11_07220 IPR001851 ABC transporter, permease CQ11_07225 IPR001851 ABC transporter, permease CQ11_07230 IPR030159 Autoinducer 2 ABC transporter, substrate-binding protein LsrB CQ11_07230 IPR028082 Periplasmic binding protein-like I CQ11_07230 IPR025997 Periplasmic binding protein CQ11_07235 IPR037171 NagB/RpiA transferase-like CQ11_07235 IPR007324 Sugar-binding domain, putative CQ11_07235 IPR036388 Winged helix-like DNA-binding domain superfamily CQ11_07240 IPR000577 Carbohydrate kinase, FGGY CQ11_07240 IPR033676 Autoinducer-2 kinase CQ11_07240 IPR018485 Carbohydrate kinase, FGGY, C-terminal CQ11_07240 IPR018484 Carbohydrate kinase, FGGY, N-terminal CQ11_07250 IPR041720 Aldolase FbaB-like, archaeal-type CQ11_07250 IPR002915 DeoC/FbaB/ lacD aldolase CQ11_07250 IPR013785 Aldolase-type TIM barrel CQ11_07270 IPR023753 FAD/NAD(P)-binding domain CQ11_07270 IPR036188 FAD/NAD(P)-binding domain superfamily CQ11_07275 IPR002589 Macro domain CQ11_07305 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_07305 IPR025420 Domain of unknown function DUF4143 CQ11_07305 IPR041682 AAA domain, group 14 CQ11_07310 IPR010280 (Uracil-5)-methyltransferase family CQ11_07310 IPR030391 RNA methyltransferase TrmA, conserved site CQ11_07310 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CQ11_07310 IPR011825 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC CQ11_07310 IPR030390 RNA methyltransferase TrmA, active site CQ11_07315 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal CQ11_07315 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_07315 IPR010225 ATP-dependent helicase HrpB CQ11_07315 IPR001650 Helicase, C-terminal CQ11_07315 IPR014001 Helicase superfamily 1/2, ATP-binding domain CQ11_07315 IPR007502 Helicase-associated domain CQ11_07315 IPR011545 DEAD/DEAH box helicase domain CQ11_07330 IPR004772 TrkH potassium transport family CQ11_07330 IPR003445 Cation transporter CQ11_07370 IPR036388 Winged helix-like DNA-binding domain superfamily CQ11_07370 IPR039420 Transcriptional regulatory protein WalR-like CQ11_07370 IPR001867 OmpR/PhoB-type DNA-binding domain CQ11_07370 IPR011006 CheY-like superfamily CQ11_07370 IPR001789 Signal transduction response regulator, receiver domain CQ11_07390 IPR031314 Deoxynucleoside kinase domain CQ11_07390 IPR002624 Deoxynucleoside kinase CQ11_07390 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_07410 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CQ11_07410 IPR038110 Threonine dehydratase, ACT-like domain superfamily CQ11_07410 IPR001721 Threonine dehydratase, ACT-like domain CQ11_07410 IPR001926 Pyridoxal-phosphate dependent enzyme CQ11_07410 IPR011820 L-threonine dehydratase biosynthetic IlvA CQ11_07410 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site CQ11_07425 IPR002410 Peptidase S33 CQ11_07425 IPR000073 Alpha/beta hydrolase fold-1 CQ11_07425 IPR029058 Alpha/Beta hydrolase fold CQ11_07430 IPR018170 Aldo/keto reductase, conserved site CQ11_07430 IPR020471 Aldo/keto reductase CQ11_07430 IPR023210 NADP-dependent oxidoreductase domain CQ11_07430 IPR036812 NADP-dependent oxidoreductase domain superfamily CQ11_07435 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase CQ11_07435 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase CQ11_07435 IPR029056 Ribokinase-like CQ11_07450 IPR000594 THIF-type NAD/FAD binding fold CQ11_07450 IPR035985 Ubiquitin-activating enzyme CQ11_07460 IPR020846 Major facilitator superfamily domain CQ11_07460 IPR036259 MFS transporter superfamily CQ11_07460 IPR011701 Major facilitator superfamily CQ11_07465 IPR007693 DNA helicase, DnaB-like, N-terminal CQ11_07465 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily CQ11_07465 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal CQ11_07465 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_07465 IPR007692 DNA helicase, DnaB type CQ11_07465 IPR007694 DNA helicase, DnaB-like, C-terminal CQ11_07485 IPR020070 Ribosomal protein L9, N-terminal CQ11_07485 IPR036935 Ribosomal protein L9, N-terminal domain superfamily CQ11_07485 IPR020069 Ribosomal protein L9, C-terminal CQ11_07485 IPR020594 Ribosomal protein L9, bacteria/chloroplast CQ11_07485 IPR009027 Ribosomal protein L9/RNase H1, N-terminal CQ11_07485 IPR000244 Ribosomal protein L9 CQ11_07485 IPR036791 Ribosomal protein L9, C-terminal domain superfamily CQ11_07490 IPR036870 Ribosomal protein S18 superfamily CQ11_07490 IPR018275 Ribosomal protein S18, conserved site CQ11_07490 IPR001648 Ribosomal protein S18 CQ11_07495 IPR011344 Single-stranded DNA-binding protein CQ11_07495 IPR012340 Nucleic acid-binding, OB-fold CQ11_07495 IPR000424 Primosome PriB/single-strand DNA-binding CQ11_07500 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 CQ11_07500 IPR035980 Ribosomal protein S6 superfamily CQ11_07500 IPR020814 Ribosomal protein S6, plastid/chloroplast CQ11_07500 IPR020815 Ribosomal protein S6, conserved site CQ11_07500 IPR000529 Ribosomal protein S6 CQ11_07505 IPR001460 Penicillin-binding protein, transpeptidase CQ11_07505 IPR036950 Penicillin binding protein transglycosylase domain CQ11_07505 IPR023346 Lysozyme-like domain superfamily CQ11_07505 IPR001264 Glycosyl transferase, family 51 CQ11_07505 IPR012338 Beta-lactamase/transpeptidase-like CQ11_07510 IPR002549 Transmembrane protein TqsA-like CQ11_07515 IPR036259 MFS transporter superfamily CQ11_07515 IPR011701 Major facilitator superfamily CQ11_07520 IPR032810 CCA-adding enzyme, C-terminal CQ11_07520 IPR023068 CCA-adding enzyme, firmicutes CQ11_07520 IPR002646 Poly A polymerase, head domain CQ11_07520 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain CQ11_07525 IPR015797 NUDIX hydrolase-like domain superfamily CQ11_07525 IPR020476 NUDIX hydrolase CQ11_07525 IPR000086 NUDIX hydrolase domain CQ11_07525 IPR020084 NUDIX hydrolase, conserved site CQ11_07545 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CQ11_07545 IPR004839 Aminotransferase, class I/classII CQ11_07545 IPR015424 Pyridoxal phosphate-dependent transferase CQ11_07545 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CQ11_07550 IPR016185 Pre-ATP-grasp domain superfamily CQ11_07550 IPR011127 D-alanine--D-alanine ligase, N-terminal domain CQ11_07550 IPR011095 D-alanine--D-alanine ligase, C-terminal CQ11_07550 IPR005905 D-alanine--D-alanine ligase CQ11_07550 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site CQ11_07550 IPR013815 ATP-grasp fold, subdomain 1 CQ11_07550 IPR011761 ATP-grasp fold CQ11_07555 IPR041468 ParB/Spo0J, HTH domain CQ11_07555 IPR004437 ParB/RepB/Spo0J partition protein CQ11_07555 IPR003115 ParB/Sulfiredoxin CQ11_07555 IPR036086 ParB/Sulfiredoxin superfamily CQ11_07560 IPR025669 AAA domain CQ11_07560 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_07565 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CQ11_07565 IPR003682 rRNA small subunit methyltransferase G CQ11_07575 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 CQ11_07575 IPR028055 Membrane insertase YidC/Oxa1, C-terminal CQ11_07585 IPR020568 Ribosomal protein S5 domain 2-type fold CQ11_07585 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CQ11_07585 IPR000100 Ribonuclease P CQ11_07585 IPR020539 Ribonuclease P, conserved site CQ11_07590 IPR020939 Ribosomal protein L34, conserved site CQ11_07590 IPR000271 Ribosomal protein L34 CQ11_07595 IPR038454 DnaA, N-terminal domain superfamily CQ11_07595 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_07595 IPR013159 Chromosomal replication initiator, DnaA C-terminal CQ11_07595 IPR001957 Chromosomal replication control, initiator DnaA CQ11_07595 IPR013317 Chromosomal replication initiator protein DnaA CQ11_07595 IPR018312 Chromosomal replication control, initiator DnaA, conserved site CQ11_07595 IPR020591 Chromosomal replication control, initiator DnaA-like CQ11_07595 IPR010921 Trp repressor/replication initiator CQ11_07595 IPR003593 AAA+ ATPase domain CQ11_07600 IPR001001 DNA polymerase III, beta sliding clamp CQ11_07600 IPR022637 DNA polymerase III, beta sliding clamp, central CQ11_07600 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal CQ11_07600 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal CQ11_07605 IPR001238 DNA-binding, RecF CQ11_07605 IPR003395 RecF/RecN/SMC, N-terminal CQ11_07605 IPR042174 DNA-binding RecF, domain 2 CQ11_07605 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_07605 IPR018078 DNA-binding, RecF, conserved site CQ11_07615 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CQ11_07615 IPR001241 DNA topoisomerase, type IIA CQ11_07615 IPR020568 Ribosomal protein S5 domain 2-type fold CQ11_07615 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 CQ11_07615 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal CQ11_07615 IPR011557 DNA gyrase, subunit B CQ11_07615 IPR006171 TOPRIM domain CQ11_07615 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CQ11_07615 IPR003594 Histidine kinase/HSP90-like ATPase CQ11_07615 IPR013760 DNA topoisomerase, type IIA-like domain superfamily CQ11_07615 IPR018522 DNA topoisomerase, type IIA, conserved site CQ11_07615 IPR034160 DNA gyrase subunit B, TOPRIM domain CQ11_07615 IPR002288 DNA gyrase B subunit, C-terminal CQ11_07620 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal CQ11_07620 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta CQ11_07620 IPR013760 DNA topoisomerase, type IIA-like domain superfamily CQ11_07620 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal CQ11_07620 IPR005743 DNA gyrase, subunit A CQ11_07620 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat CQ11_07620 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily CQ11_07625 IPR021949 Domain of unknown function DUF3566. transmembrane CQ11_07645 IPR011761 ATP-grasp fold CQ11_07660 IPR029000 Cyclophilin-like domain superfamily CQ11_07660 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain CQ11_07660 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase CQ11_07660 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site CQ11_07665 IPR022764 Peptidase S54, rhomboid domain CQ11_07665 IPR019734 Tetratricopeptide repeat CQ11_07665 IPR013026 Tetratricopeptide repeat-containing domain CQ11_07665 IPR011990 Tetratricopeptide-like helical domain superfamily CQ11_07665 IPR035952 Rhomboid-like superfamily CQ11_07670 IPR009619 Cell division protein CrgA CQ11_07675 IPR023365 Sortase domain superfamily CQ11_07675 IPR042003 Sortase E CQ11_07675 IPR005754 Sortase family CQ11_07685 IPR008271 Serine/threonine-protein kinase, active site CQ11_07685 IPR000719 Protein kinase domain CQ11_07685 IPR005543 PASTA domain CQ11_07685 IPR011009 Protein kinase-like domain superfamily CQ11_07685 IPR017441 Protein kinase, ATP binding site CQ11_07690 IPR001460 Penicillin-binding protein, transpeptidase CQ11_07690 IPR012338 Beta-lactamase/transpeptidase-like CQ11_07695 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site CQ11_07695 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA CQ11_07700 IPR001932 PPM-type phosphatase domain CQ11_07700 IPR015655 Protein phosphatase 2C family CQ11_07700 IPR036457 PPM-type phosphatase domain superfamily CQ11_07705 IPR000253 Forkhead-associated (FHA) domain CQ11_07705 IPR008984 SMAD/FHA domain superfamily CQ11_07705 IPR032030 YscD, cytoplasmic domain CQ11_07710 IPR008984 SMAD/FHA domain superfamily CQ11_07710 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_07710 IPR000253 Forkhead-associated (FHA) domain CQ11_07710 IPR003439 ABC transporter-like CQ11_07710 IPR013525 ABC-2 type transporter CQ11_07710 IPR003593 AAA+ ATPase domain CQ11_07710 IPR017871 ABC transporter, conserved site CQ11_07720 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain CQ11_07720 IPR023302 Peptidase S9A, N-terminal domain CQ11_07720 IPR002470 Peptidase S9A, prolyl oligopeptidase CQ11_07720 IPR029058 Alpha/Beta hydrolase fold CQ11_07730 IPR002156 Ribonuclease H domain CQ11_07730 IPR012337 Ribonuclease H-like superfamily CQ11_07730 IPR036397 Ribonuclease H superfamily CQ11_07730 IPR022892 Ribonuclease HI CQ11_07740 IPR035801 Protein-ADP-ribose hydrolase, macro domain CQ11_07740 IPR002589 Macro domain CQ11_07745 IPR010049 MTA/SAH nucleosidase CQ11_07745 IPR000845 Nucleoside phosphorylase domain CQ11_07745 IPR035994 Nucleoside phosphorylase superfamily CQ11_07750 IPR003815 S-ribosylhomocysteinase (LuxS) CQ11_07750 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like CQ11_07750 IPR037005 S-ribosylhomocysteinase (LuxS) superfamily CQ11_07755 IPR036390 Winged helix DNA-binding domain superfamily CQ11_07755 IPR002481 Ferric-uptake regulator CQ11_07755 IPR036388 Winged helix-like DNA-binding domain superfamily CQ11_07765 IPR004465 Ribonucleotide reductase Class Ib, NrdI CQ11_07765 IPR020852 Ribonucleotide reductase, class Ib, NrdI, bacterial CQ11_07765 IPR029039 Flavoprotein-like superfamily CQ11_07770 IPR013509 Ribonucleotide reductase large subunit, N-terminal CQ11_07770 IPR013554 Ribonucleotide reductase N-terminal CQ11_07770 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal CQ11_07770 IPR039718 Ribonucleoside-diphosphate reductase large subunit CQ11_07770 IPR013346 Ribonucleotide reductase, class I , alpha subunit CQ11_07770 IPR000788 Ribonucleotide reductase large subunit, C-terminal CQ11_07770 IPR026459 Ribonucleotide reductase, class 1b, subunit NrdE CQ11_07775 IPR036388 Winged helix-like DNA-binding domain superfamily CQ11_07775 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site CQ11_07775 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding CQ11_07775 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain CQ11_07775 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain CQ11_07775 IPR023546 Methylated-DNA--protein-cysteine methyltransferase CQ11_07775 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily CQ11_07785 IPR026494 Ribonucleoside reductase subunit beta, NrdF CQ11_07785 IPR009078 Ferritin-like superfamily CQ11_07785 IPR012348 Ribonucleotide reductase-like CQ11_07785 IPR000358 Ribonucleotide reductase small subunit family CQ11_07785 IPR030475 Ribonucleotide reductase small subunit, acitve site CQ11_07785 IPR033909 Ribonucleotide reductase small subunit CQ11_07805 IPR035906 MetI-like superfamily CQ11_07805 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CQ11_07805 IPR030165 sn-Glycerol-3-phosphate transport system permease protein UgpE CQ11_07810 IPR035906 MetI-like superfamily CQ11_07810 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CQ11_07830 IPR036188 FAD/NAD(P)-binding domain superfamily CQ11_07845 IPR007502 Helicase-associated domain CQ11_07845 IPR010222 RNA helicase HrpA CQ11_07845 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_07845 IPR003593 AAA+ ATPase domain CQ11_07845 IPR011545 DEAD/DEAH box helicase domain CQ11_07845 IPR024590 RNA helicase HrpA, C-terminal CQ11_07845 IPR001650 Helicase, C-terminal CQ11_07845 IPR014001 Helicase superfamily 1/2, ATP-binding domain CQ11_07845 IPR011709 Domain of unknown function DUF1605 CQ11_07850 IPR000792 Transcription regulator LuxR, C-terminal CQ11_07850 IPR036388 Winged helix-like DNA-binding domain superfamily CQ11_07850 IPR001789 Signal transduction response regulator, receiver domain CQ11_07850 IPR016032 Signal transduction response regulator, C-terminal effector CQ11_07850 IPR011006 CheY-like superfamily CQ11_07855 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CQ11_07855 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain CQ11_07865 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_07865 IPR003439 ABC transporter-like CQ11_07865 IPR017871 ABC transporter, conserved site CQ11_07865 IPR003593 AAA+ ATPase domain CQ11_07875 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_07875 IPR003593 AAA+ ATPase domain CQ11_07875 IPR003439 ABC transporter-like CQ11_07875 IPR017871 ABC transporter, conserved site CQ11_07875 IPR015854 ABC transporter, lipoprotein release, LolD CQ11_07875 IPR011924 Lipoprotein releasing system, ATP-binding protein CQ11_07885 IPR001789 Signal transduction response regulator, receiver domain CQ11_07885 IPR016032 Signal transduction response regulator, C-terminal effector CQ11_07885 IPR000792 Transcription regulator LuxR, C-terminal CQ11_07885 IPR011006 CheY-like superfamily CQ11_07890 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase CQ11_07890 IPR011013 Galactose mutarotase-like domain superfamily CQ11_07890 IPR014718 Glycoside hydrolase-type carbohydrate-binding CQ11_07890 IPR025532 Glucose-6-phosphate 1-epimerase CQ11_07895 IPR019777 Formate C-acetyltransferase glycine radical, conserved site CQ11_07895 IPR005144 ATP-cone domain CQ11_07895 IPR001150 Glycine radical domain CQ11_07895 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic CQ11_07900 IPR013785 Aldolase-type TIM barrel CQ11_07900 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic CQ11_07900 IPR034457 Organic radical-activating enzymes CQ11_07900 IPR001989 Radical-activating enzyme, conserved site CQ11_07905 IPR002656 Acyltransferase 3 CQ11_07905 IPR036514 SGNH hydrolase superfamily CQ11_07915 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_07915 IPR012693 ABC transporter, phosphonate import, PhnC CQ11_07915 IPR017871 ABC transporter, conserved site CQ11_07915 IPR003439 ABC transporter-like CQ11_07915 IPR003593 AAA+ ATPase domain CQ11_07920 IPR036390 Winged helix DNA-binding domain superfamily CQ11_07920 IPR036388 Winged helix-like DNA-binding domain superfamily CQ11_07920 IPR005471 Transcription regulator IclR, N-terminal CQ11_07920 IPR014757 Transcription regulator IclR, C-terminal CQ11_07920 IPR029016 GAF-like domain superfamily CQ11_07925 IPR023027 Mannitol dehydrogenase, conserved site CQ11_07925 IPR013131 Mannitol dehydrogenase, N-terminal CQ11_07925 IPR013118 Mannitol dehydrogenase, C-terminal CQ11_07925 IPR000669 Mannitol dehydrogenase CQ11_07925 IPR013328 6-phosphogluconate dehydrogenase, domain 2 CQ11_07925 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CQ11_07925 IPR036291 NAD(P)-binding domain superfamily CQ11_07930 IPR036237 Xylose isomerase-like superfamily CQ11_07930 IPR004628 Mannonate dehydratase CQ11_07935 IPR031338 KDPG/KHG aldolase, active site 2 CQ11_07935 IPR031337 KDPG/KHG aldolase, active site 1 CQ11_07935 IPR013785 Aldolase-type TIM barrel CQ11_07935 IPR000887 KDPG/KHG aldolase CQ11_07940 IPR029056 Ribokinase-like CQ11_07940 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site CQ11_07940 IPR022841 5-dehydro-2-deoxygluconokinase, Firmicutes CQ11_07940 IPR030830 5-Dehydro-2-deoxygluconokinase CQ11_07940 IPR023314 5-Dehydro-2-deoxygluconokinase-like superfamily CQ11_07940 IPR011611 Carbohydrate kinase PfkB CQ11_07945 IPR003593 AAA+ ATPase domain CQ11_07945 IPR017871 ABC transporter, conserved site CQ11_07945 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_07945 IPR003439 ABC transporter-like CQ11_07955 IPR037294 ABC transporter, BtuC-like CQ11_07955 IPR000522 ABC transporter, permease protein, BtuC-like CQ11_07960 IPR003439 ABC transporter-like CQ11_07960 IPR039421 Type I protein exporter CQ11_07960 IPR017871 ABC transporter, conserved site CQ11_07960 IPR011917 ABC transporter, lipid A export, MsbA CQ11_07960 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_07960 IPR011527 ABC transporter type 1, transmembrane domain CQ11_07960 IPR003593 AAA+ ATPase domain CQ11_07960 IPR036640 ABC transporter type 1, transmembrane domain superfamily CQ11_07965 IPR003439 ABC transporter-like CQ11_07965 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_07965 IPR036640 ABC transporter type 1, transmembrane domain superfamily CQ11_07965 IPR011527 ABC transporter type 1, transmembrane domain CQ11_07965 IPR003593 AAA+ ATPase domain CQ11_07965 IPR017871 ABC transporter, conserved site CQ11_07965 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC CQ11_07970 IPR000843 LacI-type HTH domain CQ11_07970 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CQ11_07970 IPR028082 Periplasmic binding protein-like I CQ11_07995 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily CQ11_07995 IPR008263 Glycoside hydrolase, family 16, active site CQ11_07995 IPR000757 Glycoside hydrolase family 16 CQ11_08020 IPR000055 Restriction endonuclease, type I, HsdS CQ11_08025 IPR001207 Transposase, mutator type CQ11_08040 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CQ11_08040 IPR004546 Restriction endonuclease, type I, HsdM CQ11_08040 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CQ11_08040 IPR003356 DNA methylase, adenine-specific CQ11_08040 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily CQ11_08040 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain CQ11_08045 IPR013750 GHMP kinase, C-terminal domain CQ11_08045 IPR036554 GHMP kinase, C-terminal domain superfamily CQ11_08045 IPR006203 GHMP kinase, ATP-binding, conserved site CQ11_08045 IPR006206 Mevalonate/galactokinase CQ11_08045 IPR020568 Ribosomal protein S5 domain 2-type fold CQ11_08045 IPR006204 GHMP kinase N-terminal domain CQ11_08045 IPR019741 Galactokinase, conserved site CQ11_08045 IPR022963 Galactokinase, bacterial CQ11_08045 IPR000705 Galactokinase CQ11_08045 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CQ11_08045 IPR019539 Galactokinase galactose-binding domain CQ11_08070 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_08070 IPR017871 ABC transporter, conserved site CQ11_08070 IPR015861 ABC transporter, ribose import, RbsA CQ11_08070 IPR003593 AAA+ ATPase domain CQ11_08070 IPR003439 ABC transporter-like CQ11_08075 IPR001851 ABC transporter, permease CQ11_08080 IPR028082 Periplasmic binding protein-like I CQ11_08080 IPR030159 Autoinducer 2 ABC transporter, substrate-binding protein LsrB CQ11_08080 IPR025997 Periplasmic binding protein CQ11_08085 IPR011611 Carbohydrate kinase PfkB CQ11_08085 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site CQ11_08085 IPR029056 Ribokinase-like CQ11_08085 IPR004821 Cytidyltransferase-like domain CQ11_08085 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CQ11_08085 IPR011914 RfaE bifunctional protein, domain II CQ11_08085 IPR011913 RfaE bifunctional protein, domain I CQ11_08085 IPR023030 Bifunctional protein HldE CQ11_08090 IPR036291 NAD(P)-binding domain superfamily CQ11_08090 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal CQ11_08090 IPR022616 Glycosyl hydrolase, family 4, C-terminal CQ11_08090 IPR019802 Glycoside hydrolase, family 4, conserved site CQ11_08090 IPR001088 Glycoside hydrolase, family 4 CQ11_08155 IPR036412 HAD-like superfamily CQ11_08155 IPR006379 HAD-superfamily hydrolase, subfamily IIB CQ11_08155 IPR023214 HAD superfamily CQ11_08155 IPR000150 Cof family CQ11_08160 IPR002317 Serine-tRNA ligase, type1 CQ11_08160 IPR015866 Serine-tRNA synthetase, type1, N-terminal CQ11_08160 IPR042103 Serine-tRNA synthetase, type1, N-terminal domain superfamily CQ11_08160 IPR033729 Serine-tRNA ligase catalytic core domain CQ11_08160 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm CQ11_08160 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) CQ11_08160 IPR006195 Aminoacyl-tRNA synthetase, class II CQ11_08175 IPR018528 Prephenate dehydratase, conserved site CQ11_08175 IPR001086 Prephenate dehydratase CQ11_08175 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase CQ11_08175 IPR002912 ACT domain CQ11_08200 IPR029057 Phosphoribosyltransferase-like CQ11_08200 IPR000836 Phosphoribosyltransferase domain CQ11_08200 IPR005765 Uracil phosphoribosyl transferase CQ11_08200 IPR034332 Uracil phosphoribosyltransferase, bacterial-type CQ11_08205 IPR016192 APOBEC/CMP deaminase, zinc-binding CQ11_08205 IPR016193 Cytidine deaminase-like CQ11_08205 IPR002125 Cytidine and deoxycytidylate deaminase domain CQ11_08205 IPR028883 tRNA-specific adenosine deaminase CQ11_08215 IPR004685 Branched-chain amino acid transport system II carrier protein CQ11_08220 IPR014999 Uncharacterised protein family UPF0371 CQ11_08225 IPR023299 P-type ATPase, cytoplasmic domain N CQ11_08225 IPR018303 P-type ATPase, phosphorylation site CQ11_08225 IPR001757 P-type ATPase CQ11_08225 IPR023298 P-type ATPase, transmembrane domain superfamily CQ11_08225 IPR008250 P-type ATPase, A domain superfamily CQ11_08225 IPR036412 HAD-like superfamily CQ11_08225 IPR023214 HAD superfamily CQ11_08235 IPR035985 Ubiquitin-activating enzyme CQ11_08235 IPR000594 THIF-type NAD/FAD binding fold CQ11_08235 IPR036873 Rhodanese-like domain superfamily CQ11_08235 IPR001763 Rhodanese-like domain CQ11_08240 IPR032364 Gram-positive pilin subunit D1, N-terminal CQ11_08240 IPR006311 Twin-arginine translocation pathway, signal sequence CQ11_08240 IPR019931 LPXTG cell wall anchor domain CQ11_08240 IPR013783 Immunoglobulin-like fold CQ11_08240 IPR019948 Gram-positive LPXTG cell wall anchor CQ11_08240 IPR026466 Fimbrial isopeptide formation D2 domain CQ11_08265 IPR006469 NifC-like ABC-type porter CQ11_08265 IPR011867 Molybdate ABC transporter, permease protein CQ11_08265 IPR035906 MetI-like superfamily CQ11_08265 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CQ11_08270 IPR005950 Molybdate ABC transporter, substrate-binding protein CQ11_08275 IPR012245 Molybdenum cofactor biosynthesis protein MoaB CQ11_08275 IPR036425 MoaB/Mog-like domain superfamily CQ11_08275 IPR001453 MoaB/Mog domain CQ11_08275 IPR008284 Molybdenum cofactor biosynthesis, conserved site CQ11_08280 IPR036425 MoaB/Mog-like domain superfamily CQ11_08280 IPR001453 MoaB/Mog domain CQ11_08280 IPR038987 Molybdopterin biosynthesis protein MoeA-like CQ11_08280 IPR005111 MoeA, C-terminal, domain IV CQ11_08280 IPR036135 MoeA, N-terminal and linker domain superfamily CQ11_08280 IPR005110 MoeA, N-terminal and linker domain CQ11_08280 IPR036688 MoeA, C-terminal, domain IV superfamily CQ11_08285 IPR023045 Molybdenum cofactor biosynthesis C CQ11_08285 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily CQ11_08285 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain CQ11_08290 IPR003448 Molybdopterin biosynthesis MoaE CQ11_08290 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily CQ11_08295 IPR007197 Radical SAM CQ11_08295 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site CQ11_08295 IPR010505 Molybdenum cofactor synthesis C-terminal CQ11_08295 IPR013785 Aldolase-type TIM barrel CQ11_08295 IPR006638 Elp3/MiaB/NifB CQ11_08295 IPR013483 Molybdenum cofactor biosynthesis protein A CQ11_08305 IPR013783 Immunoglobulin-like fold CQ11_08305 IPR017853 Glycoside hydrolase superfamily CQ11_08305 IPR004185 Glycoside hydrolase, family 13, N-terminal Ig-like domain CQ11_08305 IPR006047 Glycosyl hydrolase, family 13, catalytic domain CQ11_08320 IPR023346 Lysozyme-like domain superfamily CQ11_08320 IPR036950 Penicillin binding protein transglycosylase domain CQ11_08320 IPR001460 Penicillin-binding protein, transpeptidase CQ11_08320 IPR001264 Glycosyl transferase, family 51 CQ11_08320 IPR012338 Beta-lactamase/transpeptidase-like CQ11_08325 IPR034768 WhiB-like iron-sulfur binding domain CQ11_08325 IPR003482 Transcription factor WhiB CQ11_08345 IPR012318 Crp-type HTH domain CQ11_08345 IPR000595 Cyclic nucleotide-binding domain CQ11_08345 IPR018490 Cyclic nucleotide-binding-like CQ11_08345 IPR036388 Winged helix-like DNA-binding domain superfamily CQ11_08345 IPR036390 Winged helix DNA-binding domain superfamily CQ11_08345 IPR014710 RmlC-like jelly roll fold CQ11_08370 IPR022399 Helicase/secretion neighbourhood ATPase CQ11_08370 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_08370 IPR001482 Type II/IV secretion system protein CQ11_08400 IPR011545 DEAD/DEAH box helicase domain CQ11_08400 IPR001650 Helicase, C-terminal CQ11_08400 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_08400 IPR018973 DEAD/DEAH-box helicase, putative CQ11_08400 IPR014001 Helicase superfamily 1/2, ATP-binding domain CQ11_08405 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CQ11_08405 IPR001387 Cro/C1-type helix-turn-helix domain CQ11_08415 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type CQ11_08415 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific CQ11_08415 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CQ11_08415 IPR040758 Release factor glutamine methyltransferase, N-terminal domain CQ11_08415 IPR004556 Methyltransferase HemK-like CQ11_08415 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CQ11_08415 IPR007848 Methyltransferase small domain CQ11_08420 IPR023405 DNA topoisomerase, type IA, core domain CQ11_08420 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 CQ11_08420 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 CQ11_08420 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 CQ11_08420 IPR025589 Topoisomerase C-terminal repeat CQ11_08420 IPR028612 DNA topoisomerase I, type IA CQ11_08420 IPR005733 DNA topoisomerase I, bacterial-type CQ11_08420 IPR006171 TOPRIM domain CQ11_08420 IPR003602 DNA topoisomerase, type IA, DNA-binding domain CQ11_08420 IPR034149 DNA topoisomerase 1, TOPRIM domain CQ11_08420 IPR013497 DNA topoisomerase, type IA, central CQ11_08420 IPR003601 DNA topoisomerase, type IA, domain 2 CQ11_08420 IPR023406 DNA topoisomerase, type IA, active site CQ11_08420 IPR000380 DNA topoisomerase, type IA CQ11_08425 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_08425 IPR039430 Thymidylate kinase-like domain CQ11_08425 IPR018094 Thymidylate kinase CQ11_08430 IPR003593 AAA+ ATPase domain CQ11_08430 IPR022754 DNA polymerase III, gamma subunit, domain III CQ11_08430 IPR001270 ClpA/B family CQ11_08430 IPR012763 DNA polymerase III, subunit gamma/ tau CQ11_08430 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_08430 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal CQ11_08435 IPR000073 Alpha/beta hydrolase fold-1 CQ11_08435 IPR029058 Alpha/Beta hydrolase fold CQ11_08495 IPR036157 dUTPase-like superfamily CQ11_08495 IPR033704 dUTPase, trimeric CQ11_08495 IPR011962 dCTP deaminase CQ11_08495 IPR010550 Deoxycytidine triphosphate deaminase, bacterial CQ11_08500 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal CQ11_08500 IPR025383 Domain of unknown function DUF4040 CQ11_08500 IPR005281 Monovalent cation:proton antiporter, subunit B CQ11_08500 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit CQ11_08500 IPR005663 Monovalent cation proton antiporter subunit A CQ11_08500 IPR007182 Na+/H+ antiporter MnhB subunit-related protein CQ11_08535 IPR006061 Solute-binding family 1, conserved site CQ11_08535 IPR005967 Thiamin/thiamin pyrophosphate ABC transporter, substrate-binding protein, Proteobacteria CQ11_08535 IPR005948 Thiamine/thiamin pyrophosphate-binding periplasmic protein, ABC transporter CQ11_08540 IPR011867 Molybdate ABC transporter, permease protein CQ11_08540 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CQ11_08540 IPR035906 MetI-like superfamily CQ11_08560 IPR020846 Major facilitator superfamily domain CQ11_08560 IPR036259 MFS transporter superfamily CQ11_08560 IPR004638 Drug resistance transporter EmrB-like CQ11_08560 IPR011701 Major facilitator superfamily CQ11_08560 IPR023721 Multidrug resistance protein MdtD CQ11_08565 IPR011051 RmlC-like cupin domain superfamily CQ11_08565 IPR013096 Cupin 2, conserved barrel CQ11_08565 IPR014710 RmlC-like jelly roll fold CQ11_08605 IPR000600 ROK family CQ11_08605 IPR004654 Glucokinase ROK CQ11_08610 IPR005226 UPF0014 family CQ11_08620 IPR023302 Peptidase S9A, N-terminal domain CQ11_08620 IPR029058 Alpha/Beta hydrolase fold CQ11_08620 IPR002470 Peptidase S9A, prolyl oligopeptidase CQ11_08620 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain CQ11_08630 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CQ11_08630 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CQ11_08630 IPR014297 Dimethylsulphoxide reductase, chain B CQ11_08635 IPR009010 Aspartate decarboxylase-like domain superfamily CQ11_08635 IPR006657 Molybdopterin dinucleotide-binding domain CQ11_08635 IPR006656 Molybdopterin oxidoreductase CQ11_08635 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain CQ11_08635 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CQ11_08635 IPR006311 Twin-arginine translocation pathway, signal sequence CQ11_08635 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE CQ11_08635 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site CQ11_08635 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site CQ11_08640 IPR003735 Metal-sensitive transcriptional repressor CQ11_08640 IPR038390 Metal-sensitive transcriptional repressor superfamily CQ11_08645 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CQ11_08645 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily CQ11_08645 IPR017758 Coenzyme A disulphide reductase CQ11_08645 IPR023753 FAD/NAD(P)-binding domain CQ11_08645 IPR036188 FAD/NAD(P)-binding domain superfamily CQ11_08645 IPR023536 Coenzyme A disulphide reductase, staphyolococci CQ11_08655 IPR000836 Phosphoribosyltransferase domain CQ11_08655 IPR029057 Phosphoribosyltransferase-like CQ11_08655 IPR023050 Bifunctional protein PyrR CQ11_08660 IPR002082 Aspartate carbamoyltransferase CQ11_08660 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain CQ11_08660 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding CQ11_08660 IPR006130 Aspartate/ornithine carbamoyltransferase CQ11_08660 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily CQ11_08665 IPR011059 Metal-dependent hydrolase, composite domain superfamily CQ11_08665 IPR032466 Metal-dependent hydrolase CQ11_08665 IPR002195 Dihydroorotase, conserved site CQ11_08665 IPR004722 Dihydroorotase CQ11_08665 IPR006680 Amidohydrolase-related CQ11_08670 IPR011060 Ribulose-phosphate binding barrel CQ11_08670 IPR014732 Orotidine 5'-phosphate decarboxylase CQ11_08670 IPR013785 Aldolase-type TIM barrel CQ11_08670 IPR001754 Orotidine 5'-phosphate decarboxylase domain CQ11_08670 IPR018089 Orotidine 5'-phosphate decarboxylase, active site CQ11_08675 IPR006273 Orotate phosphoribosyltransferase, bacterial CQ11_08675 IPR000836 Phosphoribosyltransferase domain CQ11_08675 IPR029057 Phosphoribosyltransferase-like CQ11_08675 IPR023031 Orotate phosphoribosyltransferase CQ11_08680 IPR013785 Aldolase-type TIM barrel CQ11_08680 IPR005720 Dihydroorotate dehydrogenase domain CQ11_08680 IPR005719 Dihydroorotate dehydrogenase, class 2 CQ11_08680 IPR001295 Dihydroorotate dehydrogenase, conserved site CQ11_08685 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily CQ11_08685 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily CQ11_08685 IPR012725 Chaperone DnaK CQ11_08685 IPR018181 Heat shock protein 70, conserved site CQ11_08685 IPR013126 Heat shock protein 70 family CQ11_08690 IPR000740 GrpE nucleotide exchange factor CQ11_08690 IPR013805 GrpE nucleotide exchange factor, coiled-coil CQ11_08690 IPR009012 GrpE nucleotide exchange factor, head CQ11_08695 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily CQ11_08695 IPR018253 DnaJ domain, conserved site CQ11_08695 IPR008971 HSP40/DnaJ peptide-binding CQ11_08695 IPR001305 Heat shock protein DnaJ, cysteine-rich domain CQ11_08695 IPR012724 Chaperone DnaJ CQ11_08695 IPR036869 Chaperone J-domain superfamily CQ11_08695 IPR001623 DnaJ domain CQ11_08695 IPR002939 Chaperone DnaJ, C-terminal CQ11_08700 IPR000551 MerR-type HTH domain CQ11_08700 IPR009061 Putative DNA-binding domain superfamily CQ11_08705 IPR015797 NUDIX hydrolase-like domain superfamily CQ11_08705 IPR000086 NUDIX hydrolase domain CQ11_08705 IPR000059 NUDIX hydrolase, NudL, conserved site CQ11_08705 IPR023735 Uncharacterised nudix hydrolase NudL CQ11_08720 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily CQ11_08720 IPR030395 Glycerophosphodiester phosphodiesterase domain CQ11_08730 IPR011042 Six-bladed beta-propeller, TolB-like CQ11_08730 IPR029058 Alpha/Beta hydrolase fold CQ11_08730 IPR011659 WD40-like Beta Propeller CQ11_08730 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain CQ11_08730 IPR002469 Dipeptidylpeptidase IV, N-terminal domain CQ11_08740 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CQ11_08740 IPR022380 Glutamyl-Q tRNA(Asp) synthetase CQ11_08740 IPR000924 Glutamyl/glutaminyl-tRNA synthetase CQ11_08740 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain CQ11_08740 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CQ11_08750 IPR003593 AAA+ ATPase domain CQ11_08750 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_08750 IPR041546 ClpA/ClpB, AAA lid domain CQ11_08750 IPR028299 ClpA/B, conserved site 2 CQ11_08750 IPR018368 ClpA/B, conserved site 1 CQ11_08750 IPR019489 Clp ATPase, C-terminal CQ11_08750 IPR004176 Clp, N-terminal CQ11_08750 IPR036628 Clp, N-terminal domain superfamily CQ11_08750 IPR001270 ClpA/B family CQ11_08750 IPR003959 ATPase, AAA-type, core CQ11_08750 IPR017730 Chaperonin ClpB CQ11_08770 IPR002347 Short-chain dehydrogenase/reductase SDR CQ11_08770 IPR020904 Short-chain dehydrogenase/reductase, conserved site CQ11_08770 IPR036291 NAD(P)-binding domain superfamily CQ11_08770 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase CQ11_08780 IPR020476 NUDIX hydrolase CQ11_08780 IPR015797 NUDIX hydrolase-like domain superfamily CQ11_08780 IPR020084 NUDIX hydrolase, conserved site CQ11_08780 IPR000086 NUDIX hydrolase domain CQ11_08790 IPR001204 Phosphate transporter CQ11_08795 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype CQ11_08795 IPR000771 Fructose-bisphosphate aldolase, class-II CQ11_08795 IPR013785 Aldolase-type TIM barrel CQ11_08805 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_08805 IPR033128 Adenylosuccinate synthase, active site CQ11_08805 IPR042109 Adenylosuccinate synthetase, domain 1 CQ11_08805 IPR001114 Adenylosuccinate synthetase CQ11_08805 IPR042111 Adenylosuccinate synthetase, domain 3 CQ11_08805 IPR042110 Adenylosuccinate synthetase, domain 2 CQ11_08805 IPR018220 Adenylosuccinate synthase, GTP-binding site CQ11_08810 IPR018091 Phosphoenolpyruvate carboxykinase, GTP-utilising, conserved site CQ11_08810 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal CQ11_08810 IPR008209 Phosphoenolpyruvate carboxykinase, GTP-utilising CQ11_08810 IPR035077 Phosphoenolpyruvate carboxykinase, C-terminal P-loop domain CQ11_08810 IPR035078 Phosphoenolpyruvate carboxykinase, GTP-utilising, N-terminal CQ11_08810 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal CQ11_08815 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase CQ11_08815 IPR018236 SAICAR synthetase, conserved site CQ11_08815 IPR028923 SAICAR synthetase/ADE2, N-terminal CQ11_08820 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase CQ11_08820 IPR033524 Leu/Phe/Val dehydrogenases active site CQ11_08820 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal CQ11_08820 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain CQ11_08820 IPR014362 Glutamate dehydrogenase CQ11_08820 IPR036291 NAD(P)-binding domain superfamily CQ11_08820 IPR033922 NAD(P) binding domain of glutamate dehydrogenase CQ11_08850 IPR018093 BCCT transporter, conserved site CQ11_08850 IPR000060 BCCT transporter family CQ11_08860 IPR041033 Prealbumin-like fold domain CQ11_08860 IPR011252 Fibrogen-binding domain 1 CQ11_08860 IPR008456 Collagen binding domain CQ11_08860 IPR008454 Collagen-binding surface protein Cna-like, B-type domain CQ11_08860 IPR019931 LPXTG cell wall anchor domain CQ11_08860 IPR008966 Adhesion domain superfamily CQ11_08860 IPR013783 Immunoglobulin-like fold CQ11_08865 IPR002035 von Willebrand factor, type A CQ11_08865 IPR036465 von Willebrand factor A-like domain superfamily CQ11_08885 IPR011304 L-lactate dehydrogenase CQ11_08885 IPR018177 L-lactate dehydrogenase, active site CQ11_08885 IPR001557 L-lactate/malate dehydrogenase CQ11_08885 IPR022383 Lactate/malate dehydrogenase, C-terminal CQ11_08885 IPR036291 NAD(P)-binding domain superfamily CQ11_08885 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal CQ11_08885 IPR001236 Lactate/malate dehydrogenase, N-terminal CQ11_08890 IPR004268 Peptidoglycan biosynthesis protein MurJ CQ11_08915 IPR011057 Mss4-like superfamily CQ11_08915 IPR002579 Peptide methionine sulphoxide reductase MrsB CQ11_08915 IPR028427 Peptide methionine sulfoxide reductase CQ11_08940 IPR003414 Polyphosphate kinase CQ11_08940 IPR024953 Polyphosphate kinase middle domain CQ11_08940 IPR041108 Polyphosphate kinase, C-terminal domain 1 CQ11_08940 IPR025200 Polyphosphate kinase C-terminal domain 2 CQ11_08940 IPR036830 Polyphosphate kinase middle domain superfamily CQ11_08940 IPR036832 Polyphosphate kinase N-terminal domain superfamily CQ11_08940 IPR025198 Polyphosphate kinase N-terminal domain CQ11_08945 IPR000086 NUDIX hydrolase domain CQ11_08945 IPR020084 NUDIX hydrolase, conserved site CQ11_08945 IPR020476 NUDIX hydrolase CQ11_08945 IPR013078 Histidine phosphatase superfamily, clade-1 CQ11_08945 IPR015797 NUDIX hydrolase-like domain superfamily CQ11_08945 IPR029033 Histidine phosphatase superfamily CQ11_08950 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS CQ11_08950 IPR024370 PBP domain CQ11_08955 IPR011864 Phosphate ABC transporter, permease protein PstC CQ11_08955 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CQ11_08955 IPR035906 MetI-like superfamily CQ11_08960 IPR005672 Phosphate transport system permease protein PstA CQ11_08960 IPR035906 MetI-like superfamily CQ11_08960 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CQ11_08965 IPR005670 Phosphate transport system permease protein 1 CQ11_08965 IPR017871 ABC transporter, conserved site CQ11_08965 IPR003439 ABC transporter-like CQ11_08965 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_08965 IPR003593 AAA+ ATPase domain CQ11_08965 IPR015850 ABC transporter, phosphate import, PstB CQ11_08970 IPR001204 Phosphate transporter CQ11_08980 IPR001463 Sodium:alanine symporter CQ11_08990 IPR036907 5'-Nucleotidase, C-terminal domain superfamily CQ11_08990 IPR006146 5'-Nucleotidase, conserved site CQ11_08990 IPR008334 5'-Nucleotidase, C-terminal CQ11_08990 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type CQ11_08990 IPR029052 Metallo-dependent phosphatase-like CQ11_08990 IPR006420 NAD pyrophosphatase/5-nucleotidase NadN CQ11_08990 IPR006179 5'-Nucleotidase/apyrase CQ11_09000 IPR022939 Uncharacterised protein family UPF0678 CQ11_09000 IPR014878 Domain of unknown function DUF1794 CQ11_09000 IPR012674 Calycin CQ11_09005 IPR006222 Aminomethyltransferase, folate-binding domain CQ11_09005 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal CQ11_09005 IPR023758 tRNA-modifying protein YgfZ CQ11_09005 IPR017703 YgfZ/GcvT conserved site CQ11_09015 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily CQ11_09015 IPR003732 D-aminoacyl-tRNA deacylase DTD CQ11_09020 IPR003593 AAA+ ATPase domain CQ11_09020 IPR003959 ATPase, AAA-type, core CQ11_09020 IPR036628 Clp, N-terminal domain superfamily CQ11_09020 IPR018368 ClpA/B, conserved site 1 CQ11_09020 IPR001943 UVR domain CQ11_09020 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_09020 IPR041546 ClpA/ClpB, AAA lid domain CQ11_09020 IPR004176 Clp, N-terminal CQ11_09020 IPR001270 ClpA/B family CQ11_09020 IPR019489 Clp ATPase, C-terminal CQ11_09045 IPR011701 Major facilitator superfamily CQ11_09045 IPR005275 L-fucose permease FucP CQ11_09045 IPR036259 MFS transporter superfamily CQ11_09045 IPR020846 Major facilitator superfamily domain CQ11_09050 IPR007324 Sugar-binding domain, putative CQ11_09050 IPR013324 RNA polymerase sigma factor, region 3/4-like CQ11_09050 IPR037171 NagB/RpiA transferase-like CQ11_09060 IPR006549 HAD-superfamily hydrolase,subfamily IIIA CQ11_09060 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase CQ11_09060 IPR023214 HAD superfamily CQ11_09060 IPR036412 HAD-like superfamily CQ11_09060 IPR006543 Histidinol-phosphate phosphatase CQ11_09065 IPR000577 Carbohydrate kinase, FGGY CQ11_09065 IPR018485 Carbohydrate kinase, FGGY, C-terminal CQ11_09065 IPR018483 Carbohydrate kinase, FGGY, conserved site CQ11_09065 IPR018484 Carbohydrate kinase, FGGY, N-terminal CQ11_09070 IPR036388 Winged helix-like DNA-binding domain superfamily CQ11_09070 IPR008719 Nitrous oxide reductase accessory protein NosL CQ11_09070 IPR001034 DeoR-type HTH domain CQ11_09070 IPR036390 Winged helix DNA-binding domain superfamily CQ11_09080 IPR005929 Ribulokinase CQ11_09080 IPR018484 Carbohydrate kinase, FGGY, N-terminal CQ11_09080 IPR000577 Carbohydrate kinase, FGGY CQ11_09080 IPR018485 Carbohydrate kinase, FGGY, C-terminal CQ11_09085 IPR023499 L-ribulose-5-phosphate 4-epimerase UlaF CQ11_09085 IPR001303 Class II aldolase/adducin N-terminal CQ11_09085 IPR036409 Class II aldolase/adducin N-terminal domain superfamily CQ11_09090 IPR000577 Carbohydrate kinase, FGGY CQ11_09090 IPR018485 Carbohydrate kinase, FGGY, C-terminal CQ11_09090 IPR018483 Carbohydrate kinase, FGGY, conserved site CQ11_09090 IPR018484 Carbohydrate kinase, FGGY, N-terminal CQ11_09090 IPR005999 Glycerol kinase CQ11_09095 IPR036117 DhaL domain superfamily CQ11_09095 IPR004007 DhaL domain CQ11_09095 IPR004006 DhaK domain CQ11_09100 IPR036291 NAD(P)-binding domain superfamily CQ11_09100 IPR013154 Alcohol dehydrogenase, N-terminal CQ11_09100 IPR013149 Alcohol dehydrogenase, C-terminal CQ11_09100 IPR011032 GroES-like superfamily CQ11_09105 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family CQ11_09105 IPR011860 Ribose 5-phosphate isomerase B, Actinobacteria-type CQ11_09105 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily CQ11_09110 IPR002781 Transmembrane protein TauE-like CQ11_09115 IPR023885 4Fe4S-binding SPASM domain CQ11_09115 IPR007197 Radical SAM CQ11_09115 IPR034491 Anaerobic Ser-type sulfatase-maturating enzyme CQ11_09115 IPR013785 Aldolase-type TIM barrel CQ11_09120 IPR036259 MFS transporter superfamily CQ11_09120 IPR003663 Sugar/inositol transporter CQ11_09120 IPR020846 Major facilitator superfamily domain CQ11_09120 IPR005829 Sugar transporter, conserved site CQ11_09120 IPR005828 Major facilitator, sugar transporter-like CQ11_09130 IPR017850 Alkaline-phosphatase-like, core domain superfamily CQ11_09130 IPR000917 Sulfatase, N-terminal CQ11_09145 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CQ11_09145 IPR035906 MetI-like superfamily CQ11_09150 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CQ11_09150 IPR035906 MetI-like superfamily CQ11_09160 IPR013780 Glycosyl hydrolase, all-beta CQ11_09160 IPR017853 Glycoside hydrolase superfamily CQ11_09160 IPR025887 Glycoside hydrolase family 31, N-terminal domain CQ11_09160 IPR000322 Glycoside hydrolase family 31 CQ11_09160 IPR011013 Galactose mutarotase-like domain superfamily CQ11_09165 IPR014036 DeoR C-terminal sensor domain CQ11_09165 IPR037171 NagB/RpiA transferase-like CQ11_09165 IPR001034 DeoR-type HTH domain CQ11_09165 IPR036388 Winged helix-like DNA-binding domain superfamily CQ11_09165 IPR036390 Winged helix DNA-binding domain superfamily CQ11_09165 IPR018356 Transcription regulator, HTH DeoR-type, conserved site CQ11_09175 IPR035906 MetI-like superfamily CQ11_09175 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CQ11_09180 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CQ11_09180 IPR035906 MetI-like superfamily CQ11_09185 IPR013785 Aldolase-type TIM barrel CQ11_09185 IPR000771 Fructose-bisphosphate aldolase, class-II CQ11_09185 IPR011289 Fructose-1,6-bisphosphate aldolase, class 2 CQ11_09195 IPR034116 AGE domain CQ11_09195 IPR012341 Six-hairpin glycosidase-like superfamily CQ11_09195 IPR008928 Six-hairpin glycosidase superfamily CQ11_09195 IPR030875 Sulfoquinovose isomerase CQ11_09205 IPR013022 Xylose isomerase-like, TIM barrel domain CQ11_09205 IPR013453 Xylose isomerase, actinobacteria CQ11_09205 IPR001998 Xylose isomerase CQ11_09205 IPR036237 Xylose isomerase-like superfamily CQ11_09210 IPR000577 Carbohydrate kinase, FGGY CQ11_09210 IPR006000 Xylulokinase CQ11_09210 IPR018485 Carbohydrate kinase, FGGY, C-terminal CQ11_09210 IPR018484 Carbohydrate kinase, FGGY, N-terminal CQ11_09210 IPR018483 Carbohydrate kinase, FGGY, conserved site CQ11_09215 IPR028082 Periplasmic binding protein-like I CQ11_09215 IPR025997 Periplasmic binding protein CQ11_09225 IPR001851 ABC transporter, permease CQ11_09230 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CQ11_09230 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CQ11_09230 IPR015424 Pyridoxal phosphate-dependent transferase CQ11_09230 IPR004839 Aminotransferase, class I/classII CQ11_09230 IPR027619 Putative C-S lyase CQ11_09235 IPR004770 Na+/H+ antiporter NhaC CQ11_09235 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal CQ11_09245 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich CQ11_09245 IPR006104 Glycosyl hydrolases family 2, sugar binding domain CQ11_09245 IPR017853 Glycoside hydrolase superfamily CQ11_09245 IPR013783 Immunoglobulin-like fold CQ11_09245 IPR006103 Glycoside hydrolase family 2, catalytic domain CQ11_09245 IPR023933 Glycoside hydrolase, family 2, beta-galactosidase CQ11_09245 IPR032312 Beta-galactosidase, domain 4 CQ11_09245 IPR023232 Glycoside hydrolase, family 2, active site CQ11_09245 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily CQ11_09245 IPR004199 Beta galactosidase small chain/ domain 5 CQ11_09245 IPR011013 Galactose mutarotase-like domain superfamily CQ11_09245 IPR008979 Galactose-binding-like domain superfamily CQ11_09245 IPR006101 Glycoside hydrolase, family 2 CQ11_09245 IPR014718 Glycoside hydrolase-type carbohydrate-binding CQ11_09250 IPR035906 MetI-like superfamily CQ11_09250 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CQ11_09255 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CQ11_09255 IPR035906 MetI-like superfamily CQ11_09265 IPR023588 Transcription regulator HTH, PurR CQ11_09265 IPR028082 Periplasmic binding protein-like I CQ11_09265 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CQ11_09265 IPR000843 LacI-type HTH domain CQ11_09275 IPR035906 MetI-like superfamily CQ11_09275 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CQ11_09280 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CQ11_09280 IPR035906 MetI-like superfamily CQ11_09295 IPR006103 Glycoside hydrolase family 2, catalytic domain CQ11_09295 IPR004199 Beta galactosidase small chain/ domain 5 CQ11_09295 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily CQ11_09295 IPR032312 Beta-galactosidase, domain 4 CQ11_09295 IPR011013 Galactose mutarotase-like domain superfamily CQ11_09295 IPR013783 Immunoglobulin-like fold CQ11_09295 IPR017853 Glycoside hydrolase superfamily CQ11_09295 IPR006104 Glycosyl hydrolases family 2, sugar binding domain CQ11_09295 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich CQ11_09295 IPR008979 Galactose-binding-like domain superfamily CQ11_09295 IPR014718 Glycoside hydrolase-type carbohydrate-binding CQ11_09295 IPR006101 Glycoside hydrolase, family 2 CQ11_09295 IPR023230 Glycoside hydrolase, family 2, conserved site CQ11_09295 IPR023232 Glycoside hydrolase, family 2, active site CQ11_09295 IPR023933 Glycoside hydrolase, family 2, beta-galactosidase CQ11_09305 IPR000843 LacI-type HTH domain CQ11_09305 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CQ11_09305 IPR028082 Periplasmic binding protein-like I CQ11_09315 IPR003474 Gluconate transporter CQ11_09325 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CQ11_09325 IPR013328 6-phosphogluconate dehydrogenase, domain 2 CQ11_09325 IPR006114 6-phosphogluconate dehydrogenase, C-terminal CQ11_09325 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating CQ11_09325 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding CQ11_09325 IPR006184 6-phosphogluconate-binding site CQ11_09325 IPR036291 NAD(P)-binding domain superfamily CQ11_09325 IPR006183 6-phosphogluconate dehydrogenase CQ11_09335 IPR025705 Beta-hexosaminidase CQ11_09335 IPR015883 Glycoside hydrolase family 20, catalytic domain CQ11_09335 IPR017853 Glycoside hydrolase superfamily CQ11_09335 IPR011658 PA14 domain CQ11_09335 IPR029018 Beta-hexosaminidase-like, domain 2 CQ11_09335 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal CQ11_09335 IPR037524 PA14/GLEYA domain CQ11_09340 IPR023232 Glycoside hydrolase, family 2, active site CQ11_09340 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily CQ11_09340 IPR040605 Glycoside hydrolase family 2, domain 5 CQ11_09340 IPR008964 Invasin/intimin cell-adhesion fragments CQ11_09340 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich CQ11_09340 IPR017853 Glycoside hydrolase superfamily CQ11_09340 IPR006104 Glycosyl hydrolases family 2, sugar binding domain CQ11_09340 IPR032311 Domain of unknown function DUF4982 CQ11_09340 IPR006103 Glycoside hydrolase family 2, catalytic domain CQ11_09340 IPR006101 Glycoside hydrolase, family 2 CQ11_09340 IPR013783 Immunoglobulin-like fold CQ11_09340 IPR008979 Galactose-binding-like domain superfamily CQ11_09345 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU CQ11_09345 IPR023064 D-ribose pyranase CQ11_09345 IPR023750 RbsD-like superfamily CQ11_09350 IPR011877 Ribokinase CQ11_09350 IPR002139 Ribokinase/fructokinase CQ11_09350 IPR011611 Carbohydrate kinase PfkB CQ11_09350 IPR029056 Ribokinase-like CQ11_09350 IPR004788 Ribose 5-phosphate isomerase, type A CQ11_09350 IPR037171 NagB/RpiA transferase-like CQ11_09355 IPR028082 Periplasmic binding protein-like I CQ11_09355 IPR025997 Periplasmic binding protein CQ11_09360 IPR001851 ABC transporter, permease CQ11_09365 IPR017871 ABC transporter, conserved site CQ11_09365 IPR003439 ABC transporter-like CQ11_09365 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_09365 IPR015861 ABC transporter, ribose import, RbsA CQ11_09365 IPR003593 AAA+ ATPase domain CQ11_09370 IPR000843 LacI-type HTH domain CQ11_09370 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CQ11_09370 IPR028082 Periplasmic binding protein-like I CQ11_09375 IPR041698 Methyltransferase domain 25 CQ11_09375 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CQ11_09380 IPR017871 ABC transporter, conserved site CQ11_09380 IPR003439 ABC transporter-like CQ11_09380 IPR003593 AAA+ ATPase domain CQ11_09380 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_09380 IPR005890 Nitrate transport ATP-binding subunit C/D CQ11_09395 IPR029052 Metallo-dependent phosphatase-like CQ11_09395 IPR006294 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase CQ11_09395 IPR008334 5'-Nucleotidase, C-terminal CQ11_09395 IPR036907 5'-Nucleotidase, C-terminal domain superfamily CQ11_09395 IPR041827 CpdB, N-terminal metallophosphatase domain CQ11_09395 IPR006179 5'-Nucleotidase/apyrase CQ11_09395 IPR006146 5'-Nucleotidase, conserved site CQ11_09395 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type CQ11_09405 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CQ11_09405 IPR028082 Periplasmic binding protein-like I CQ11_09405 IPR000843 LacI-type HTH domain CQ11_09410 IPR036259 MFS transporter superfamily CQ11_09410 IPR005828 Major facilitator, sugar transporter-like CQ11_09410 IPR020846 Major facilitator superfamily domain CQ11_09415 IPR003416 MgtC/SapB/SrpB/YhiD family CQ11_09425 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily CQ11_09425 IPR009215 TIM-barrel domain, IGPS-like CQ11_09425 IPR013785 Aldolase-type TIM barrel CQ11_09430 IPR008322 Uncharacterised protein family UPF0261 CQ11_09435 IPR015424 Pyridoxal phosphate-dependent transferase CQ11_09435 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CQ11_09435 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CQ11_09435 IPR004839 Aminotransferase, class I/classII CQ11_09445 IPR036705 ADP-ribosylation/Crystallin J1 superfamily CQ11_09445 IPR005502 ADP-ribosylation/Crystallin J1 CQ11_09450 IPR003339 ABC/ECF transporter, transmembrane component CQ11_09450 IPR024919 ECF transporter transmembrane protein EcfT CQ11_09455 IPR003439 ABC transporter-like CQ11_09455 IPR003593 AAA+ ATPase domain CQ11_09455 IPR017871 ABC transporter, conserved site CQ11_09455 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_09485 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_09485 IPR017871 ABC transporter, conserved site CQ11_09485 IPR003593 AAA+ ATPase domain CQ11_09485 IPR003439 ABC transporter-like CQ11_09555 IPR001650 Helicase, C-terminal CQ11_09555 IPR011545 DEAD/DEAH box helicase domain CQ11_09555 IPR014001 Helicase superfamily 1/2, ATP-binding domain CQ11_09555 IPR006474 Helicase Cas3, CRISPR-associated, core CQ11_09555 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_09555 IPR006483 CRISPR-associated Cas3-type HD domain CQ11_09555 IPR035011 CRISPR-associated endonuclease/helicase Cas3 CQ11_09555 IPR038257 CRISPR-associated Cas3-type HD domain superfamily CQ11_09555 IPR041372 Cas3, C-terminal CQ11_09585 IPR019851 CRISPR-associated protein Cas1, ECOLI subtype CQ11_09585 IPR002729 CRISPR-associated protein Cas1 CQ11_09585 IPR042206 CRISPR-associated endonuclease Cas1, C-terminal domain CQ11_09585 IPR042211 CRISPR-associated endonuclease Cas1, N-terminal domain CQ11_09585 IPR033641 CRISPR-associated protein Cas1, type I-E CQ11_09600 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CQ11_09600 IPR001387 Cro/C1-type helix-turn-helix domain CQ11_09605 IPR013780 Glycosyl hydrolase, all-beta CQ11_09605 IPR006047 Glycosyl hydrolase, family 13, catalytic domain CQ11_09605 IPR017853 Glycoside hydrolase superfamily CQ11_09610 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CQ11_09610 IPR035906 MetI-like superfamily CQ11_09615 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CQ11_09615 IPR035906 MetI-like superfamily CQ11_09630 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily CQ11_09630 IPR040442 Pyruvate kinase-like domain superfamily CQ11_09630 IPR010121 Pyruvate, phosphate dikinase CQ11_09630 IPR008279 PEP-utilising enzyme, mobile domain CQ11_09630 IPR000121 PEP-utilising enzyme, C-terminal CQ11_09630 IPR013815 ATP-grasp fold, subdomain 1 CQ11_09630 IPR018274 PEP-utilising enzyme, active site CQ11_09630 IPR023151 PEP-utilising enzyme, conserved site CQ11_09630 IPR036637 Phosphohistidine domain superfamily CQ11_09630 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding CQ11_09635 IPR009051 Alpha-helical ferredoxin CQ11_09635 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CQ11_09635 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CQ11_09635 IPR016166 FAD-binding domain, PCMH-type CQ11_09635 IPR036318 FAD-binding, type PCMH-like superfamily CQ11_09635 IPR016164 FAD-linked oxidase-like, C-terminal CQ11_09635 IPR004113 FAD-linked oxidase, C-terminal CQ11_09635 IPR006094 FAD linked oxidase, N-terminal CQ11_09645 IPR022742 Serine aminopeptidase, S33 CQ11_09645 IPR000073 Alpha/beta hydrolase fold-1 CQ11_09645 IPR029058 Alpha/Beta hydrolase fold CQ11_09650 IPR008220 Homoserine/serine acetyltransferase MetX-like CQ11_09650 IPR029058 Alpha/Beta hydrolase fold CQ11_09650 IPR000073 Alpha/beta hydrolase fold-1 CQ11_09655 IPR038765 Papain-like cysteine peptidase superfamily CQ11_09655 IPR000064 Endopeptidase, NLPC/P60 domain CQ11_09660 IPR008162 Inorganic pyrophosphatase CQ11_09660 IPR036649 Inorganic pyrophosphatase superfamily CQ11_09665 IPR012338 Beta-lactamase/transpeptidase-like CQ11_09665 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C CQ11_09675 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal CQ11_09675 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CQ11_09675 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain CQ11_09675 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal CQ11_09675 IPR012094 tRNA(Ile)-lysidine synthase CQ11_09685 IPR037219 Peptidase M41-like CQ11_09685 IPR000642 Peptidase M41 CQ11_09685 IPR003593 AAA+ ATPase domain CQ11_09685 IPR041569 AAA ATPase, AAA+ lid domain CQ11_09685 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_09685 IPR003959 ATPase, AAA-type, core CQ11_09685 IPR003960 ATPase, AAA-type, conserved site CQ11_09685 IPR005936 Peptidase, FtsH CQ11_09690 IPR001474 GTP cyclohydrolase I CQ11_09690 IPR020602 GTP cyclohydrolase I domain CQ11_09690 IPR018234 GTP cyclohydrolase I, conserved site CQ11_09695 IPR011005 Dihydropteroate synthase-like CQ11_09695 IPR000489 Pterin-binding domain CQ11_09695 IPR006390 Dihydropteroate synthase CQ11_09700 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK CQ11_09700 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily CQ11_09720 IPR028082 Periplasmic binding protein-like I CQ11_09720 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CQ11_09720 IPR000843 LacI-type HTH domain CQ11_09725 IPR006059 Bacterial extracellular solute-binding protein CQ11_09730 IPR035906 MetI-like superfamily CQ11_09730 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CQ11_09735 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CQ11_09735 IPR035906 MetI-like superfamily CQ11_09740 IPR006103 Glycoside hydrolase family 2, catalytic domain CQ11_09740 IPR017853 Glycoside hydrolase superfamily CQ11_09740 IPR006104 Glycosyl hydrolases family 2, sugar binding domain CQ11_09740 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich CQ11_09740 IPR023230 Glycoside hydrolase, family 2, conserved site CQ11_09740 IPR023933 Glycoside hydrolase, family 2, beta-galactosidase CQ11_09740 IPR023232 Glycoside hydrolase, family 2, active site CQ11_09740 IPR006101 Glycoside hydrolase, family 2 CQ11_09740 IPR014718 Glycoside hydrolase-type carbohydrate-binding CQ11_09740 IPR008979 Galactose-binding-like domain superfamily CQ11_09740 IPR011013 Galactose mutarotase-like domain superfamily CQ11_09740 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily CQ11_09740 IPR004199 Beta galactosidase small chain/ domain 5 CQ11_09740 IPR013783 Immunoglobulin-like fold CQ11_09740 IPR032312 Beta-galactosidase, domain 4 CQ11_09750 IPR016152 Phosphotransferase/anion transporter CQ11_09750 IPR006318 Phosphotransferase system, enzyme I-like CQ11_09750 IPR002178 PTS EIIA type-2 domain CQ11_09750 IPR008731 Phosphotransferase system, enzyme I N-terminal CQ11_09750 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site CQ11_09750 IPR002114 Phosphotransferase system, HPr serine phosphorylation site CQ11_09750 IPR023151 PEP-utilising enzyme, conserved site CQ11_09750 IPR000121 PEP-utilising enzyme, C-terminal CQ11_09750 IPR018274 PEP-utilising enzyme, active site CQ11_09750 IPR008279 PEP-utilising enzyme, mobile domain CQ11_09750 IPR035895 HPr-like superfamily CQ11_09750 IPR000032 Phosphocarrier protein HPr-like CQ11_09750 IPR036637 Phosphohistidine domain superfamily CQ11_09750 IPR036618 PtsI, HPr-binding domain superfamily CQ11_09750 IPR040442 Pyruvate kinase-like domain superfamily CQ11_09750 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily CQ11_09755 IPR012737 Dihydroxyacetone kinase, subunit L CQ11_09755 IPR036117 DhaL domain superfamily CQ11_09755 IPR004007 DhaL domain CQ11_09760 IPR004006 DhaK domain CQ11_09760 IPR012736 Dihydroxyacetone kinase DhaK, subunit 1 CQ11_09770 IPR042176 Pantoate-beta-alanine ligase, C-terminal domain CQ11_09770 IPR003721 Pantoate-beta-alanine ligase CQ11_09770 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CQ11_09770 IPR004821 Cytidyltransferase-like domain CQ11_09775 IPR003190 Aspartate decarboxylase CQ11_09775 IPR009010 Aspartate decarboxylase-like domain superfamily CQ11_09785 IPR012340 Nucleic acid-binding, OB-fold CQ11_09785 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type CQ11_09785 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal CQ11_09785 IPR002313 Lysine-tRNA ligase, class II CQ11_09785 IPR006195 Aminoacyl-tRNA synthetase, class II CQ11_09785 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) CQ11_09790 IPR000731 Sterol-sensing domain CQ11_09790 IPR004869 Membrane transport protein MMPL domain CQ11_09795 IPR018485 Carbohydrate kinase, FGGY, C-terminal CQ11_09795 IPR000577 Carbohydrate kinase, FGGY CQ11_09795 IPR018483 Carbohydrate kinase, FGGY, conserved site CQ11_09795 IPR005999 Glycerol kinase CQ11_09795 IPR018484 Carbohydrate kinase, FGGY, N-terminal CQ11_09800 IPR023271 Aquaporin-like CQ11_09800 IPR022357 Major intrinsic protein, conserved site CQ11_09800 IPR000425 Major intrinsic protein CQ11_09810 IPR005511 Senescence marker protein-30 (SMP-30) CQ11_09810 IPR013658 SMP-30/Gluconolactonase/LRE-like region CQ11_09810 IPR011042 Six-bladed beta-propeller, TolB-like CQ11_09815 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CQ11_09815 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CQ11_09815 IPR004017 Cysteine-rich domain CQ11_09815 IPR009051 Alpha-helical ferredoxin CQ11_09815 IPR017753 Glycerol-3-phosphate dehydrogenase, GlpC subunit CQ11_09820 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit CQ11_09820 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain CQ11_09820 IPR036188 FAD/NAD(P)-binding domain superfamily CQ11_09825 IPR007419 BFD-like [2Fe-2S]-binding domain CQ11_09825 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily CQ11_09825 IPR006076 FAD dependent oxidoreductase CQ11_09825 IPR036188 FAD/NAD(P)-binding domain superfamily CQ11_09825 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase CQ11_09825 IPR017752 Glycerol-3-phosphate dehydrogenase, GlpA subunit CQ11_09840 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal CQ11_09840 IPR011257 DNA glycosylase CQ11_09840 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif CQ11_09840 IPR003265 HhH-GPD domain CQ11_09840 IPR000445 Helix-hairpin-helix motif CQ11_09850 IPR041166 LapB, rubredoxin metal binding domain CQ11_09850 IPR004504 DNA repair protein RadA CQ11_09850 IPR014774 KaiC-like domain CQ11_09850 IPR003593 AAA+ ATPase domain CQ11_09850 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_09850 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain CQ11_09850 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CQ11_09850 IPR020568 Ribosomal protein S5 domain 2-type fold CQ11_09855 IPR006037 Regulator of K+ conductance, C-terminal CQ11_09855 IPR036291 NAD(P)-binding domain superfamily CQ11_09855 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily CQ11_09855 IPR003148 Regulator of K+ conductance, N-terminal CQ11_09860 IPR004772 TrkH potassium transport family CQ11_09860 IPR003445 Cation transporter CQ11_09865 IPR009061 Putative DNA-binding domain superfamily CQ11_09865 IPR041657 Helix-turn-helix domain, group 17 CQ11_09865 IPR010093 SinI-like, DNA-binding domain CQ11_09875 IPR023187 Transcriptional regulator MarR-type, conserved site CQ11_09875 IPR036390 Winged helix DNA-binding domain superfamily CQ11_09875 IPR036388 Winged helix-like DNA-binding domain superfamily CQ11_09875 IPR000835 MarR-type HTH domain CQ11_09880 IPR013078 Histidine phosphatase superfamily, clade-1 CQ11_09880 IPR029033 Histidine phosphatase superfamily CQ11_09890 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase CQ11_09890 IPR000537 UbiA prenyltransferase family CQ11_09890 IPR026046 UbiA prenyltransferase domain containing protein 1 CQ11_09895 IPR042099 AMP-dependent synthetase-like superfamily CQ11_09895 IPR020845 AMP-binding, conserved site CQ11_09895 IPR025110 AMP-binding enzyme, C-terminal domain CQ11_09895 IPR000873 AMP-dependent synthetase/ligase CQ11_09905 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CQ11_09905 IPR035906 MetI-like superfamily CQ11_09910 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CQ11_09910 IPR035906 MetI-like superfamily CQ11_09920 IPR014748 Enoyl-CoA hydratase, C-terminal CQ11_09920 IPR001753 Enoyl-CoA hydratase/isomerase CQ11_09920 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB CQ11_09920 IPR029045 ClpP/crotonase-like domain superfamily CQ11_09925 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal CQ11_09925 IPR029017 Enolase-like, N-terminal CQ11_09925 IPR029065 Enolase C-terminal domain-like CQ11_09925 IPR036849 Enolase-like, C-terminal domain superfamily CQ11_09925 IPR041338 OSBS, enolase-like N-terminal domain CQ11_09925 IPR010196 o-Succinylbenzoate synthase, MenC type1 CQ11_09930 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding CQ11_09930 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain CQ11_09930 IPR029061 Thiamin diphosphate-binding fold CQ11_09930 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase CQ11_09935 IPR011782 Peptidase S1C, Do CQ11_09935 IPR041489 PDZ domain 6 CQ11_09935 IPR001940 Peptidase S1C CQ11_09935 IPR001478 PDZ domain CQ11_09935 IPR036034 PDZ superfamily CQ11_09935 IPR009003 Peptidase S1, PA clan CQ11_09940 IPR015890 Chorismate-utilising enzyme, C-terminal CQ11_09940 IPR004561 Isochorismate synthase CQ11_09940 IPR005801 ADC synthase CQ11_09945 IPR023576 UbiE/COQ5 methyltransferase, conserved site CQ11_09945 IPR004033 UbiE/COQ5 methyltransferase CQ11_09945 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CQ11_09950 IPR011777 Geranylgeranyl reductase family CQ11_09950 IPR036188 FAD/NAD(P)-binding domain superfamily CQ11_09950 IPR002938 FAD-binding domain CQ11_09955 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 CQ11_09955 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid CQ11_09955 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily CQ11_09960 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit CQ11_09960 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit CQ11_09965 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily CQ11_09965 IPR010218 NADH dehydrogenase, subunit C CQ11_09965 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit CQ11_09970 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily CQ11_09970 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site CQ11_09970 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H CQ11_09970 IPR001135 NADH-quinone oxidoreductase, subunit D CQ11_09970 IPR029014 [NiFe]-hydrogenase, large subunit CQ11_09975 IPR042128 NuoE domain CQ11_09975 IPR002023 NADH-quinone oxidoreductase subunit E-like CQ11_09975 IPR041921 NADH-quinone oxidoreductase subunit E, N-terminal CQ11_09975 IPR036249 Thioredoxin-like superfamily CQ11_09980 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site CQ11_09980 IPR011537 NADH ubiquinone oxidoreductase, F subunit CQ11_09980 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily CQ11_09980 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily CQ11_09980 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain CQ11_09980 IPR019554 Soluble ligand binding domain CQ11_09980 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain CQ11_09985 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain CQ11_09985 IPR006657 Molybdopterin dinucleotide-binding domain CQ11_09985 IPR010228 NADH:ubiquinone oxidoreductase, subunit G CQ11_09985 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site CQ11_09985 IPR006656 Molybdopterin oxidoreductase CQ11_09985 IPR009010 Aspartate decarboxylase-like domain superfamily CQ11_09985 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain CQ11_09985 IPR036010 2Fe-2S ferredoxin-like superfamily CQ11_09985 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding CQ11_09990 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H CQ11_09990 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site CQ11_09995 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CQ11_09995 IPR010226 NADH-quinone oxidoreductase, chain I CQ11_09995 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CQ11_10000 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 CQ11_10000 IPR042106 NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJ CQ11_10005 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like CQ11_10005 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K CQ11_10010 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 CQ11_10010 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup CQ11_10010 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit CQ11_10010 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal CQ11_10015 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit CQ11_10015 IPR010227 NADH-quinone oxidoreductase, chain M/4 CQ11_10015 IPR003918 NADH:ubiquinone oxidoreductase CQ11_10020 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 CQ11_10020 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit CQ11_10025 IPR014119 Heptaprenyl diphosphate synthase component II CQ11_10025 IPR008949 Isoprenoid synthase domain superfamily CQ11_10025 IPR000092 Polyprenyl synthetase CQ11_10025 IPR033749 Polyprenyl synthetase, conserved site CQ11_10030 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_10030 IPR011115 SecA DEAD-like, N-terminal CQ11_10030 IPR014018 SecA motor DEAD CQ11_10030 IPR011130 SecA, preprotein cross-linking domain CQ11_10030 IPR011116 SecA Wing/Scaffold CQ11_10030 IPR036266 SecA, Wing/Scaffold superfamily CQ11_10030 IPR036670 SecA, preprotein cross-linking domain superfamily CQ11_10030 IPR020937 SecA conserved site CQ11_10030 IPR000185 Protein translocase subunit SecA CQ11_10070 IPR038729 Rad50/SbcC-type AAA domain CQ11_10070 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_10075 IPR026843 Nuclease SbcCD subunit D, C-terminal domain CQ11_10075 IPR004593 Nuclease SbcCD subunit D CQ11_10075 IPR041796 Mre11 nuclease, N-terminal metallophosphatase domain CQ11_10075 IPR029052 Metallo-dependent phosphatase-like CQ11_10075 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type CQ11_10080 IPR011809 Histidinol-phosphate phosphatase, putative, inositol monophosphatase CQ11_10080 IPR020583 Inositol monophosphatase, metal-binding site CQ11_10080 IPR000760 Inositol monophosphatase-like CQ11_10085 IPR010914 RsgA GTPase domain CQ11_10085 IPR004881 Ribosome biogenesis GTPase RsgA CQ11_10085 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_10085 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain CQ11_10090 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta CQ11_10090 IPR001986 Enolpyruvate transferase domain CQ11_10090 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase CQ11_10090 IPR036968 Enolpyruvate transferase domain superfamily CQ11_10090 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site CQ11_10110 IPR029058 Alpha/Beta hydrolase fold CQ11_10110 IPR013094 Alpha/beta hydrolase fold-3 CQ11_10120 IPR000914 Solute-binding protein family 5 domain CQ11_10120 IPR023765 Solute-binding protein family 5, conserved site CQ11_10120 IPR039424 Solute-binding protein family 5 CQ11_10120 IPR030678 Peptide/nickel binding protein, MppA-type CQ11_10125 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CQ11_10125 IPR035906 MetI-like superfamily CQ11_10130 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_10130 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal CQ11_10130 IPR017871 ABC transporter, conserved site CQ11_10130 IPR003439 ABC transporter-like CQ11_10130 IPR003593 AAA+ ATPase domain CQ11_10135 IPR017871 ABC transporter, conserved site CQ11_10135 IPR003439 ABC transporter-like CQ11_10135 IPR003593 AAA+ ATPase domain CQ11_10135 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_10135 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal CQ11_10140 IPR020624 Schiff base-forming aldolase, conserved site CQ11_10140 IPR013785 Aldolase-type TIM barrel CQ11_10140 IPR020625 Schiff base-forming aldolase, active site CQ11_10140 IPR002220 DapA-like CQ11_10145 IPR000600 ROK family CQ11_10150 IPR011060 Ribulose-phosphate binding barrel CQ11_10150 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase CQ11_10150 IPR013785 Aldolase-type TIM barrel CQ11_10155 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase CQ11_10155 IPR004547 Glucosamine-6-phosphate isomerase CQ11_10155 IPR018321 Glucosamine-6-phosphate isomerase, conserved site CQ11_10155 IPR037171 NagB/RpiA transferase-like CQ11_10160 IPR032466 Metal-dependent hydrolase CQ11_10160 IPR006680 Amidohydrolase-related CQ11_10160 IPR003764 N-acetylglucosamine-6-phosphate deacetylase CQ11_10160 IPR011059 Metal-dependent hydrolase, composite domain superfamily CQ11_10165 IPR036388 Winged helix-like DNA-binding domain superfamily CQ11_10165 IPR013324 RNA polymerase sigma factor, region 3/4-like CQ11_10165 IPR039425 RNA polymerase sigma-70 like CQ11_10165 IPR014284 RNA polymerase sigma-70 like domain CQ11_10165 IPR013325 RNA polymerase sigma factor, region 2 CQ11_10165 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 CQ11_10165 IPR007627 RNA polymerase sigma-70 region 2 CQ11_10165 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site CQ11_10165 IPR014293 RNA polymerase sigma-70, actinobacteria CQ11_10180 IPR015424 Pyridoxal phosphate-dependent transferase CQ11_10180 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CQ11_10180 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CQ11_10180 IPR005814 Aminotransferase class-III CQ11_10180 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase CQ11_10185 IPR020843 Polyketide synthase, enoylreductase domain CQ11_10185 IPR013149 Alcohol dehydrogenase, C-terminal CQ11_10185 IPR013154 Alcohol dehydrogenase, N-terminal CQ11_10185 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site CQ11_10185 IPR011032 GroES-like superfamily CQ11_10185 IPR036291 NAD(P)-binding domain superfamily CQ11_10190 IPR036779 LysM domain superfamily CQ11_10190 IPR018392 LysM domain CQ11_10190 IPR000064 Endopeptidase, NLPC/P60 domain CQ11_10190 IPR038765 Papain-like cysteine peptidase superfamily CQ11_10190 IPR003646 SH3-like domain, bacterial-type CQ11_10200 IPR011603 2-oxoglutarate dehydrogenase E1 component CQ11_10200 IPR029061 Thiamin diphosphate-binding fold CQ11_10200 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily CQ11_10200 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain CQ11_10200 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal CQ11_10200 IPR042179 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal domain superfamily CQ11_10200 IPR001017 Dehydrogenase, E1 component CQ11_10200 IPR005475 Transketolase-like, pyrimidine-binding domain CQ11_10200 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain CQ11_10205 IPR005170 Transporter-associated domain CQ11_10205 IPR016169 FAD-binding, type PCMH, subdomain 2 CQ11_10205 IPR036318 FAD-binding, type PCMH-like superfamily CQ11_10205 IPR002550 CNNM, transmembrane domain CQ11_10205 IPR000644 CBS domain CQ11_10210 IPR000644 CBS domain CQ11_10210 IPR002550 CNNM, transmembrane domain CQ11_10215 IPR011055 Duplicated hybrid motif CQ11_10215 IPR016047 Peptidase M23 CQ11_10220 IPR030395 Glycerophosphodiester phosphodiesterase domain CQ11_10220 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily CQ11_10235 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_10235 IPR003593 AAA+ ATPase domain CQ11_10235 IPR003439 ABC transporter-like CQ11_10235 IPR017871 ABC transporter, conserved site CQ11_10235 IPR015854 ABC transporter, lipoprotein release, LolD CQ11_10255 IPR001278 Arginine-tRNA ligase CQ11_10255 IPR005148 Arginyl tRNA synthetase N-terminal domain CQ11_10255 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily CQ11_10255 IPR035684 Arginyl-tRNA synthetase, catalytic core domain CQ11_10255 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CQ11_10255 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding CQ11_10255 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CQ11_10255 IPR008909 DALR anticodon binding CQ11_10260 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal CQ11_10260 IPR002986 Diaminopimelate decarboxylase, LysA CQ11_10260 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal CQ11_10260 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site CQ11_10260 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal CQ11_10260 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site CQ11_10260 IPR000183 Ornithine/DAP/Arg decarboxylase CQ11_10260 IPR029066 PLP-binding barrel CQ11_10265 IPR002912 ACT domain CQ11_10265 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding CQ11_10265 IPR016204 Homoserine dehydrogenase CQ11_10265 IPR001342 Homoserine dehydrogenase, catalytic CQ11_10265 IPR019811 Homoserine dehydrogenase, conserved site CQ11_10265 IPR036291 NAD(P)-binding domain superfamily CQ11_10270 IPR004450 Threonine synthase-like CQ11_10270 IPR026260 Threonine synthase, bacterial/archaeal CQ11_10270 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CQ11_10270 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site CQ11_10270 IPR001926 Pyridoxal-phosphate dependent enzyme CQ11_10275 IPR036554 GHMP kinase, C-terminal domain superfamily CQ11_10275 IPR006204 GHMP kinase N-terminal domain CQ11_10275 IPR020568 Ribosomal protein S5 domain 2-type fold CQ11_10275 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CQ11_10275 IPR006203 GHMP kinase, ATP-binding, conserved site CQ11_10275 IPR000870 Homoserine kinase CQ11_10280 IPR036269 Rho termination factor, N-terminal domain superfamily CQ11_10280 IPR041703 Transcription termination factor Rho, ATP binding domain CQ11_10280 IPR011112 Rho termination factor, N-terminal CQ11_10280 IPR003593 AAA+ ATPase domain CQ11_10280 IPR012340 Nucleic acid-binding, OB-fold CQ11_10280 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain CQ11_10280 IPR004665 Transcription termination factor Rho CQ11_10280 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_10280 IPR011129 Cold shock domain CQ11_10280 IPR011113 Rho termination factor, RNA-binding domain CQ11_10285 IPR042105 Ribosomal protein L31 superfamily CQ11_10285 IPR034704 L28p-like CQ11_10285 IPR002150 Ribosomal protein L31 CQ11_10285 IPR027491 Ribosomal protein L31 type A CQ11_10290 IPR004373 Peptide chain release factor 1 CQ11_10290 IPR005139 Peptide chain release factor CQ11_10290 IPR000352 Peptide chain release factor class I CQ11_10295 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CQ11_10295 IPR040758 Release factor glutamine methyltransferase, N-terminal domain CQ11_10295 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CQ11_10295 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific CQ11_10295 IPR004556 Methyltransferase HemK-like CQ11_10300 IPR006070 YrdC-like domain CQ11_10300 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily CQ11_10305 IPR000715 Glycosyl transferase, family 4 CQ11_10315 IPR000568 ATP synthase, F0 complex, subunit A CQ11_10315 IPR035908 ATP synthase, F0 complex, subunit A superfamily CQ11_10320 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site CQ11_10320 IPR000454 ATP synthase, F0 complex, subunit C CQ11_10320 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast CQ11_10320 IPR002379 V-ATPase proteolipid subunit C-like domain CQ11_10320 IPR035921 F/V-ATP synthase subunit C superfamily CQ11_10320 IPR038662 F1F0 ATP synthase subunit C superfamily CQ11_10325 IPR005864 ATP synthase, F0 complex, subunit b, bacterial CQ11_10325 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast CQ11_10325 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily CQ11_10330 IPR020781 ATPase, OSCP/delta subunit, conserved site CQ11_10330 IPR000711 ATPase, OSCP/delta subunit CQ11_10335 IPR005294 ATP synthase, F1 complex, alpha subunit CQ11_10335 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_10335 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site CQ11_10335 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily CQ11_10335 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain CQ11_10335 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily CQ11_10335 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain CQ11_10335 IPR033732 ATP synthase, F1 complex, alpha subunit nucleotide-binding domain CQ11_10335 IPR000793 ATP synthase, alpha subunit, C-terminal CQ11_10335 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily CQ11_10340 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site CQ11_10340 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily CQ11_10340 IPR000131 ATP synthase, F1 complex, gamma subunit CQ11_10345 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_10345 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal CQ11_10345 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain CQ11_10345 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily CQ11_10345 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain CQ11_10345 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site CQ11_10345 IPR003593 AAA+ ATPase domain CQ11_10345 IPR005722 ATP synthase, F1 complex, beta subunit CQ11_10360 IPR011856 tRNA endonuclease-like domain superfamily CQ11_10360 IPR002793 Endonuclease NucS CQ11_10400 IPR032091 Maltogenic Amylase, C-terminal CQ11_10400 IPR017853 Glycoside hydrolase superfamily CQ11_10400 IPR013780 Glycosyl hydrolase, all-beta CQ11_10400 IPR006047 Glycosyl hydrolase, family 13, catalytic domain CQ11_10405 IPR000843 LacI-type HTH domain CQ11_10405 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CQ11_10405 IPR028082 Periplasmic binding protein-like I CQ11_10415 IPR030156 Maltose/maltodextrin transport system permease protein MalF-like CQ11_10415 IPR035277 MalF, N-terminal CQ11_10415 IPR029345 Maltose transport system permease protein MalF, P2 domain CQ11_10415 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CQ11_10415 IPR035906 MetI-like superfamily CQ11_10420 IPR035906 MetI-like superfamily CQ11_10420 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CQ11_10430 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta CQ11_10430 IPR006047 Glycosyl hydrolase, family 13, catalytic domain CQ11_10430 IPR004193 Glycoside hydrolase, family 13, N-terminal CQ11_10430 IPR013780 Glycosyl hydrolase, all-beta CQ11_10430 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB CQ11_10430 IPR037439 1,4-alpha-glucan-branching enzyme CQ11_10430 IPR014756 Immunoglobulin E-set CQ11_10430 IPR013783 Immunoglobulin-like fold CQ11_10430 IPR017853 Glycoside hydrolase superfamily CQ11_10435 IPR002575 Aminoglycoside phosphotransferase CQ11_10435 IPR040999 Maltokinase N-terminal cap domain CQ11_10435 IPR011009 Protein kinase-like domain superfamily CQ11_10440 IPR006047 Glycosyl hydrolase, family 13, catalytic domain CQ11_10440 IPR013780 Glycosyl hydrolase, all-beta CQ11_10440 IPR017853 Glycoside hydrolase superfamily CQ11_10440 IPR032091 Maltogenic Amylase, C-terminal CQ11_10440 IPR012810 Trehalose synthase/alpha-amylase, N-terminal CQ11_10445 IPR021828 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase, domain N/S CQ11_10445 IPR006047 Glycosyl hydrolase, family 13, catalytic domain CQ11_10445 IPR013780 Glycosyl hydrolase, all-beta CQ11_10445 IPR017853 Glycoside hydrolase superfamily CQ11_10445 IPR013783 Immunoglobulin-like fold CQ11_10445 IPR026585 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase CQ11_10455 IPR017871 ABC transporter, conserved site CQ11_10455 IPR003593 AAA+ ATPase domain CQ11_10455 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_10455 IPR015854 ABC transporter, lipoprotein release, LolD CQ11_10455 IPR003439 ABC transporter-like CQ11_10470 IPR028325 Voltage-gated potassium channel CQ11_10470 IPR013099 Potassium channel domain CQ11_10475 IPR011833 Glycogen/starch/alpha-glucan phosphorylase CQ11_10475 IPR000811 Glycosyl transferase, family 35 CQ11_10475 IPR035090 Phosphorylase pyridoxal-phosphate attachment site CQ11_10480 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CQ11_10480 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CQ11_10480 IPR002306 Tryptophan-tRNA ligase CQ11_10480 IPR002305 Aminoacyl-tRNA synthetase, class Ic CQ11_10485 IPR006047 Glycosyl hydrolase, family 13, catalytic domain CQ11_10485 IPR013783 Immunoglobulin-like fold CQ11_10485 IPR014756 Immunoglobulin E-set CQ11_10485 IPR017853 Glycoside hydrolase superfamily CQ11_10485 IPR011837 Glycogen debranching enzyme, GlgX type CQ11_10485 IPR004193 Glycoside hydrolase, family 13, N-terminal CQ11_10485 IPR013780 Glycosyl hydrolase, all-beta CQ11_10490 IPR015375 NADH pyrophosphatase-like, N-terminal CQ11_10490 IPR022925 NADH pyrophosphatase NudC CQ11_10490 IPR000086 NUDIX hydrolase domain CQ11_10490 IPR020084 NUDIX hydrolase, conserved site CQ11_10490 IPR015797 NUDIX hydrolase-like domain superfamily CQ11_10490 IPR015376 Zinc ribbon, NADH pyrophosphatase CQ11_10495 IPR034739 UvrD/AddA helicase, N-terminal CQ11_10495 IPR014016 UvrD-like helicase, ATP-binding domain CQ11_10495 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_10495 IPR002121 HRDC domain CQ11_10495 IPR010997 HRDC-like superfamily CQ11_10495 IPR000212 DNA helicase, UvrD/REP type CQ11_10495 IPR014017 UvrD-like DNA helicase, C-terminal CQ11_10495 IPR013986 DExx box DNA helicase domain superfamily CQ11_10510 IPR027065 Lon protease CQ11_10510 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CQ11_10510 IPR020568 Ribosomal protein S5 domain 2-type fold CQ11_10510 IPR036034 PDZ superfamily CQ11_10510 IPR001478 PDZ domain CQ11_10510 IPR039381 Endopeptidase La, PDZ domain CQ11_10510 IPR008269 Peptidase S16, Lon proteolytic domain CQ11_10520 IPR005372 Uncharacterised protein family UPF0182 CQ11_10530 IPR000421 Coagulation factor 5/8 C-terminal domain CQ11_10530 IPR018905 Alpha-galactosidase, NEW3 domain CQ11_10530 IPR013783 Immunoglobulin-like fold CQ11_10530 IPR008979 Galactose-binding-like domain superfamily CQ11_10530 IPR011040 Sialidase CQ11_10530 IPR026856 Sialidase family CQ11_10530 IPR036278 Sialidase superfamily CQ11_10530 IPR006311 Twin-arginine translocation pathway, signal sequence CQ11_10530 IPR014756 Immunoglobulin E-set CQ11_10550 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CQ11_10550 IPR000524 Transcription regulator HTH, GntR CQ11_10550 IPR015424 Pyridoxal phosphate-dependent transferase CQ11_10550 IPR004839 Aminotransferase, class I/classII CQ11_10550 IPR036388 Winged helix-like DNA-binding domain superfamily CQ11_10550 IPR036390 Winged helix DNA-binding domain superfamily CQ11_10550 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CQ11_10555 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_10555 IPR003593 AAA+ ATPase domain CQ11_10555 IPR003439 ABC transporter-like CQ11_10565 IPR004713 Calcium/proton exchanger CQ11_10565 IPR004837 Sodium/calcium exchanger membrane region CQ11_10575 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain CQ11_10575 IPR036188 FAD/NAD(P)-binding domain superfamily CQ11_10575 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily CQ11_10575 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal CQ11_10575 IPR011280 Succinate dehydrogenase/fumarate reductase flavoprotein subunit, low-GC Gram-positive bacteria CQ11_10575 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily CQ11_10575 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site CQ11_10595 IPR012259 Dihydrofolate reductase CQ11_10595 IPR024072 Dihydrofolate reductase-like domain superfamily CQ11_10595 IPR017925 Dihydrofolate reductase conserved site CQ11_10595 IPR001796 Dihydrofolate reductase domain CQ11_10600 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily CQ11_10600 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain CQ11_10600 IPR000398 Thymidylate synthase CQ11_10600 IPR020940 Thymidylate synthase, active site CQ11_10610 IPR011495 Signal transduction histidine kinase, subgroup 2, dimerisation and phosphoacceptor domain CQ11_10610 IPR035965 PAS domain superfamily CQ11_10610 IPR005467 Histidine kinase domain CQ11_10610 IPR022066 Signal transduction histidine kinase, N-terminal CQ11_10610 IPR038424 Signal transduction histidine kinase, N-terminal domain superfamily CQ11_10610 IPR003594 Histidine kinase/HSP90-like ATPase CQ11_10610 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CQ11_10615 IPR003482 Transcription factor WhiB CQ11_10615 IPR034768 WhiB-like iron-sulfur binding domain CQ11_10625 IPR003439 ABC transporter-like CQ11_10625 IPR017871 ABC transporter, conserved site CQ11_10625 IPR017911 ABC transporter, macrolide export, ATP-binding domain CQ11_10625 IPR003593 AAA+ ATPase domain CQ11_10625 IPR025857 MacB-like periplasmic core domain CQ11_10625 IPR027417 P-loop containing nucleoside triphosphate hydrolase CQ11_10625 IPR003838 ABC transporter permease protein domain CQ11_10630 IPR000792 Transcription regulator LuxR, C-terminal CQ11_10630 IPR001789 Signal transduction response regulator, receiver domain CQ11_10630 IPR016032 Signal transduction response regulator, C-terminal effector CQ11_10630 IPR011006 CheY-like superfamily CQ11_10635 IPR003594 Histidine kinase/HSP90-like ATPase CQ11_10635 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain CQ11_10635 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CQ11_10640 IPR003738 SOS response associated peptidase (SRAP) CQ11_10640 IPR036590 SOS response associated peptidase-like CQ11_10645 IPR036420 BRCT domain superfamily CQ11_10645 IPR001357 BRCT domain CQ11_10645 IPR013839 NAD-dependent DNA ligase, adenylation CQ11_10645 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type CQ11_10645 IPR010994 RuvA domain 2-like CQ11_10645 IPR013840 NAD-dependent DNA ligase, N-terminal CQ11_10645 IPR012340 Nucleic acid-binding, OB-fold CQ11_10645 IPR004150 NAD-dependent DNA ligase, OB-fold CQ11_10645 IPR041663 DisA/LigA, helix-hairpin-helix motif CQ11_10645 IPR018239 NAD-dependent DNA ligase, active site CQ11_10645 IPR033136 NAD-dependent DNA ligase, conserved site CQ11_10645 IPR001679 NAD-dependent DNA ligase CQ11_10650 IPR011663 UbiC transcription regulator-associated CQ11_10650 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily CQ11_10650 IPR036388 Winged helix-like DNA-binding domain superfamily CQ11_10650 IPR036390 Winged helix DNA-binding domain superfamily CQ11_10650 IPR000524 Transcription regulator HTH, GntR CQ11_10655 IPR036705 ADP-ribosylation/Crystallin J1 superfamily CQ11_10655 IPR005502 ADP-ribosylation/Crystallin J1 CQ11_10665 IPR029056 Ribokinase-like CQ11_10665 IPR002139 Ribokinase/fructokinase CQ11_10665 IPR011611 Carbohydrate kinase PfkB CQ11_10665 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site CQ11_10670 IPR026287 Protein adenylyltransferase SoFic-like CQ11_10670 IPR036597 Fido-like domain superfamily CQ11_10670 IPR040198 Fido domain-containing protein CQ11_10670 IPR025758 Fic/DOC N-terminal CQ11_10670 IPR003812 Fido domain CQ11_10675 IPR023828 Peptidase S8, subtilisin, Ser-active site CQ11_10675 IPR015500 Peptidase S8, subtilisin-related CQ11_10675 IPR034176 Peptidase MprA-like catalytic domain CQ11_10675 IPR007280 Peptidase, C-terminal, archaeal/bacterial CQ11_10675 IPR000209 Peptidase S8/S53 domain CQ11_10675 IPR036852 Peptidase S8/S53 domain superfamily CQ11_10675 IPR023827 Peptidase S8, subtilisin, Asp-active site CQ11_10675 IPR022398 Peptidase S8, subtilisin, His-active site CQ11_10680 IPR025202 Phospholipase D-like domain CQ11_10680 IPR027379 Cardiolipin synthase N-terminal CQ11_10680 IPR030840 Cardiolipin synthase A CQ11_10680 IPR022924 Cardiolipin synthase CQ11_10680 IPR001736 Phospholipase D/Transphosphatidylase CQ11_10685 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C CQ11_10685 IPR003837 Glu-tRNAGln amidotransferase C subunit CQ11_10690 IPR020556 Amidase, conserved site CQ11_10690 IPR036928 Amidase signature (AS) superfamily CQ11_10690 IPR023631 Amidase signature domain CQ11_10690 IPR000120 Amidase CQ11_10690 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit CQ11_10695 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 CQ11_10695 IPR042114 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 1 CQ11_10695 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like CQ11_10695 IPR018027 Asn/Gln amidotransferase CQ11_10695 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic CQ11_10695 IPR017959 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E CQ11_10695 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit CQ11_10695 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site CQ11_10695 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain CQ11_10700 IPR012301 Malic enzyme, N-terminal domain CQ11_10700 IPR037062 Malic enzyme, N-terminal domain superfamily CQ11_10700 IPR012302 Malic enzyme, NAD-binding CQ11_10700 IPR001891 Malic oxidoreductase CQ11_10700 IPR036291 NAD(P)-binding domain superfamily CQ11_10700 IPR002912 ACT domain CQ11_10700 IPR015884 Malic enzyme, conserved site