locus-tag class description Tpau_0001 PF08299 Bacterial dnaA protein helix-turn-helix Tpau_0001 PF00308 Bacterial dnaA protein Tpau_0003 PF00712 DNA polymerase III beta subunit, N-terminal domain Tpau_0003 PF02767 DNA polymerase III beta subunit, central domain Tpau_0003 PF02768 DNA polymerase III beta subunit, C-terminal domain Tpau_0004 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase Tpau_0004 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain Tpau_0005 PF02463 RecF/RecN/SMC N terminal domain Tpau_0006 PF03033 Glycosyltransferase family 28 N-terminal domain Tpau_0007 PF07690 Major Facilitator Superfamily Tpau_0008 PF05258 Dna[CI] antecedent, DciA Tpau_0009 PF01751 Toprim domain Tpau_0009 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tpau_0009 PF00204 DNA gyrase B Tpau_0009 PF00986 DNA gyrase B subunit, carboxyl terminus Tpau_0010 PF03989 DNA gyrase C-terminal domain, beta-propeller Tpau_0010 PF00521 DNA gyrase/topoisomerase IV, subunit A Tpau_0011 PF12089 Transmembrane domain of unknown function (DUF3566) Tpau_0015 PF03471 Transporter associated domain Tpau_0015 PF00571 CBS domain Tpau_0015 PF01595 Cyclin M transmembrane N-terminal domain Tpau_0016 PF01595 Cyclin M transmembrane N-terminal domain Tpau_0016 PF03471 Transporter associated domain Tpau_0016 PF00571 CBS domain Tpau_0022 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Tpau_0023 PF00877 NlpC/P60 family Tpau_0025 PF06781 Cell division protein CrgA Tpau_0026 PF00117 Glutamine amidotransferase class-I Tpau_0027 PF00069 Protein kinase domain Tpau_0027 PF03793 PASTA domain Tpau_0028 PF00069 Protein kinase domain Tpau_0029 PF00905 Penicillin binding protein transpeptidase domain Tpau_0030 PF01098 Cell cycle protein Tpau_0032 PF16697 Inner membrane component of T3SS, cytoplasmic domain Tpau_0033 PF12401 Protein of unknown function (DUF2662) Tpau_0033 PF00498 FHA domain Tpau_0037 PF00083 Sugar (and other) transporter Tpau_0040 PF02909 Tetracyclin repressor-like, C-terminal domain Tpau_0040 PF00440 Bacterial regulatory proteins, tetR family Tpau_0041 PF00107 Zinc-binding dehydrogenase Tpau_0041 PF08240 Alcohol dehydrogenase GroES-like domain Tpau_0043 PF00743 Flavin-binding monooxygenase-like Tpau_0046 PF00440 Bacterial regulatory proteins, tetR family Tpau_0048 PF03583 Secretory lipase Tpau_0052 PF02397 Bacterial sugar transferase Tpau_0053 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase Tpau_0055 PF00483 Nucleotidyl transferase Tpau_0057 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase Tpau_0058 PF00534 Glycosyl transferases group 1 Tpau_0060 PF00534 Glycosyl transferases group 1 Tpau_0060 PF13439 Glycosyltransferase Family 4 Tpau_0063 PF03808 Glycosyl transferase WecB/TagA/CpsF family Tpau_0067 PF08484 C-methyltransferase C-terminal domain Tpau_0067 PF08421 Putative zinc binding domain Tpau_0068 PF00483 Nucleotidyl transferase Tpau_0071 PF00202 Aminotransferase class-III Tpau_0074 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) Tpau_0074 PF05425 Copper resistance protein D Tpau_0079 PF00942 Cellulose binding domain Tpau_0079 PF00150 Cellulase (glycosyl hydrolase family 5) Tpau_0079 PF00331 Glycosyl hydrolase family 10 Tpau_0081 PF00403 Heavy-metal-associated domain Tpau_0082 PF07859 alpha/beta hydrolase fold Tpau_0084 PF17240 Family of unknown function (DUF5313) Tpau_0087 PF00881 Nitroreductase family Tpau_0088 PF03734 L,D-transpeptidase catalytic domain Tpau_0088 PF17964 Bacterial Ig domain Tpau_0093 PF00486 Transcriptional regulatory protein, C terminal Tpau_0093 PF00072 Response regulator receiver domain Tpau_0094 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tpau_0094 PF00672 HAMP domain Tpau_0094 PF00512 His Kinase A (phospho-acceptor) domain Tpau_0095 PF00484 Carbonic anhydrase Tpau_0097 PF00486 Transcriptional regulatory protein, C terminal Tpau_0097 PF00072 Response regulator receiver domain Tpau_0098 PF00672 HAMP domain Tpau_0098 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tpau_0098 PF00512 His Kinase A (phospho-acceptor) domain Tpau_0099 PF01177 Asp/Glu/Hydantoin racemase Tpau_0101 PF13732 Domain of unknown function (DUF4162) Tpau_0101 PF00005 ABC transporter Tpau_0105 PF07992 Pyridine nucleotide-disulphide oxidoreductase Tpau_0107 PF01645 Conserved region in glutamate synthase Tpau_0107 PF01493 GXGXG motif Tpau_0107 PF00310 Glutamine amidotransferases class-II Tpau_0107 PF04898 Glutamate synthase central domain Tpau_0108 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Tpau_0108 PF07992 Pyridine nucleotide-disulphide oxidoreductase Tpau_0113 PF00857 Isochorismatase family Tpau_0114 PF03737 Aldolase/RraA Tpau_0115 PF00171 Aldehyde dehydrogenase family Tpau_0124 PF00106 short chain dehydrogenase Tpau_0125 PF01169 Uncharacterized protein family UPF0016 Tpau_0126 PF02777 Iron/manganese superoxide dismutases, C-terminal domain Tpau_0126 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain Tpau_0130 PF01343 Peptidase family S49 Tpau_0130 PF06965 Na+/H+ antiporter 1 Tpau_0131 PF00581 Rhodanese-like domain Tpau_0133 PF03009 Glycerophosphoryl diester phosphodiesterase family Tpau_0135 PF00440 Bacterial regulatory proteins, tetR family Tpau_0136 PF03816 Cell envelope-related transcriptional attenuator domain Tpau_0138 PF00860 Permease family Tpau_0140 PF00440 Bacterial regulatory proteins, tetR family Tpau_0141 PF07690 Major Facilitator Superfamily Tpau_0145 PF01842 ACT domain Tpau_0145 PF00800 Prephenate dehydratase Tpau_0148 PF13845 Septum formation Tpau_0149 PF02403 Seryl-tRNA synthetase N-terminal domain Tpau_0149 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Tpau_0156 PF00355 Rieske [2Fe-2S] domain Tpau_0160 PF08486 Stage II sporulation protein Tpau_0161 PF03275 UDP-galactopyranose mutase Tpau_0162 PF17994 Galactofuranosyltransferase 2 N-terminal Tpau_0163 PF01569 PAP2 superfamily Tpau_0164 PF01040 UbiA prenyltransferase family Tpau_0167 PF00990 Diguanylate cyclase, GGDEF domain Tpau_0167 PF13426 PAS domain Tpau_0167 PF00563 EAL domain Tpau_0168 PF00756 Putative esterase Tpau_0168 PF08310 LGFP repeat Tpau_0172 PF04371 Porphyromonas-type peptidyl-arginine deiminase Tpau_0173 PF00296 Luciferase-like monooxygenase Tpau_0174 PF00501 AMP-binding enzyme Tpau_0175 PF00550 Phosphopantetheine attachment site Tpau_0175 PF08659 KR domain Tpau_0175 PF02801 Beta-ketoacyl synthase, C-terminal domain Tpau_0175 PF00109 Beta-ketoacyl synthase, N-terminal domain Tpau_0175 PF16197 Ketoacyl-synthetase C-terminal extension Tpau_0175 PF00698 Acyl transferase domain Tpau_0175 PF14765 Polyketide synthase dehydratase Tpau_0176 PF01039 Carboxyl transferase domain Tpau_0177 PF01565 FAD binding domain Tpau_0177 PF02913 FAD linked oxidases, C-terminal domain Tpau_0178 PF13185 GAF domain Tpau_0179 PF00756 Putative esterase Tpau_0183 PF02896 PEP-utilising enzyme, TIM barrel domain Tpau_0183 PF00391 PEP-utilising enzyme, mobile domain Tpau_0183 PF05524 PEP-utilising enzyme, N-terminal Tpau_0184 PF08220 DeoR-like helix-turn-helix domain Tpau_0184 PF00455 DeoR C terminal sensor domain Tpau_0185 PF00294 pfkB family carbohydrate kinase Tpau_0186 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit Tpau_0186 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 Tpau_0189 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Tpau_0190 PF01047 MarR family Tpau_0191 PF05222 Alanine dehydrogenase/PNT, N-terminal domain Tpau_0191 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch Tpau_0191 PF01262 Alanine dehydrogenase/PNT, C-terminal domain Tpau_0192 PF02233 NAD(P) transhydrogenase beta subunit Tpau_0195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Tpau_0195 PF03466 LysR substrate binding domain Tpau_0198 PF03576 Peptidase family S58 Tpau_0200 PF01047 MarR family Tpau_0201 PF04679 ATP dependent DNA ligase C terminal region Tpau_0201 PF01068 ATP dependent DNA ligase domain Tpau_0201 PF13298 DNA polymerase Ligase (LigD) Tpau_0202 PF02735 Ku70/Ku80 beta-barrel domain Tpau_0204 PF01370 NAD dependent epimerase/dehydratase family Tpau_0207 PF00892 EamA-like transporter family Tpau_0208 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Tpau_0208 PF03466 LysR substrate binding domain Tpau_0210 PF07690 Major Facilitator Superfamily Tpau_0212 PF00211 Adenylate and Guanylate cyclase catalytic domain Tpau_0212 PF16701 Adenylate cyclase regulatory domain Tpau_0213 PF03313 Serine dehydratase alpha chain Tpau_0213 PF03315 Serine dehydratase beta chain Tpau_0214 PF00293 NUDIX domain Tpau_0215 PF06224 Winged helix DNA-binding domain Tpau_0216 PF02661 Fic/DOC family Tpau_0217 PF00005 ABC transporter Tpau_0218 PF00480 ROK family Tpau_0219 PF02661 Fic/DOC family Tpau_0222 PF01695 IstB-like ATP binding protein Tpau_0224 PF07929 Plasmid pRiA4b ORF-3-like protein Tpau_0229 PF03781 Sulfatase-modifying factor enzyme 1 Tpau_0238 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system Tpau_0239 PF05016 ParE toxin of type II toxin-antitoxin system, parDE Tpau_0240 PF11774 Lsr2 Tpau_0245 PF00005 ABC transporter Tpau_0245 PF12704 MacB-like periplasmic core domain Tpau_0245 PF02687 FtsX-like permease family Tpau_0246 PF00069 Protein kinase domain Tpau_0253 PF17841 BID domain of Bartonella effector protein (Bep) Tpau_0253 PF03389 MobA/MobL family Tpau_0253 PF01443 Viral (Superfamily 1) RNA helicase Tpau_0268 PF13276 HTH-like domain Tpau_0268 PF00665 Integrase core domain Tpau_0272 PF00665 Integrase core domain Tpau_0272 PF13276 HTH-like domain Tpau_0279 PF00665 Integrase core domain Tpau_0279 PF13276 HTH-like domain Tpau_0280 PF00296 Luciferase-like monooxygenase Tpau_0284 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Tpau_0284 PF00205 Thiamine pyrophosphate enzyme, central domain Tpau_0284 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Tpau_0290 PF03780 Asp23 family, cell envelope-related function Tpau_0294 PF00872 Transposase, Mutator family Tpau_0302 PF13276 HTH-like domain Tpau_0302 PF00665 Integrase core domain Tpau_0305 PF08245 Mur ligase middle domain Tpau_0310 PF01494 FAD binding domain Tpau_0313 PF10738 Probable lipoprotein LpqN Tpau_0323 PF00872 Transposase, Mutator family Tpau_0327 PF00823 PPE family Tpau_0333 PF00082 Subtilase family Tpau_0335 PF14032 PknH-like extracellular domain Tpau_0335 PF00069 Protein kinase domain Tpau_0339 PF01965 DJ-1/PfpI family Tpau_0340 PF00440 Bacterial regulatory proteins, tetR family Tpau_0341 PF02803 Thiolase, C-terminal domain Tpau_0341 PF00108 Thiolase, N-terminal domain Tpau_0342 PF00378 Enoyl-CoA hydratase/isomerase Tpau_0342 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Tpau_0342 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Tpau_0346 PF01431 Peptidase family M13 Tpau_0346 PF05649 Peptidase family M13 Tpau_0348 PF02678 Pirin Tpau_0348 PF17954 Quercetinase C-terminal cupin domain Tpau_0351 PF00990 Diguanylate cyclase, GGDEF domain Tpau_0354 PF00072 Response regulator receiver domain Tpau_0354 PF00196 Bacterial regulatory proteins, luxR family Tpau_0356 PF00206 Lyase Tpau_0356 PF10415 Fumarase C C-terminus Tpau_0358 PF00545 ribonuclease Tpau_0359 PF00440 Bacterial regulatory proteins, tetR family Tpau_0360 PF00111 2Fe-2S iron-sulfur cluster binding domain Tpau_0360 PF00970 Oxidoreductase FAD-binding domain Tpau_0360 PF00175 Oxidoreductase NAD-binding domain Tpau_0361 PF00487 Fatty acid desaturase Tpau_0364 PF03176 MMPL family Tpau_0366 PF02390 Putative methyltransferase Tpau_0367 PF07161 LppX_LprAFG lipoprotein Tpau_0368 PF07690 Major Facilitator Superfamily Tpau_0372 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain Tpau_0372 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain Tpau_0373 PF00230 Major intrinsic protein Tpau_0376 PF01042 Endoribonuclease L-PSP Tpau_0381 PF07992 Pyridine nucleotide-disulphide oxidoreductase Tpau_0381 PF00724 NADH:flavin oxidoreductase / NADH oxidase family Tpau_0382 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Tpau_0382 PF03466 LysR substrate binding domain Tpau_0386 PF00171 Aldehyde dehydrogenase family Tpau_0387 PF00300 Histidine phosphatase superfamily (branch 1) Tpau_0387 PF00106 short chain dehydrogenase Tpau_0388 PF00144 Beta-lactamase Tpau_0392 PF01494 FAD binding domain Tpau_0394 PF00004 ATPase family associated with various cellular activities (AAA) Tpau_0394 PF17866 AAA lid domain Tpau_0396 PF00005 ABC transporter Tpau_0396 PF02687 FtsX-like permease family Tpau_0396 PF12704 MacB-like periplasmic core domain Tpau_0399 PF08281 Sigma-70, region 4 Tpau_0399 PF04542 Sigma-70 region 2 Tpau_0401 PF08241 Methyltransferase domain Tpau_0406 PF07992 Pyridine nucleotide-disulphide oxidoreductase Tpau_0407 PF13188 PAS domain Tpau_0407 PF00512 His Kinase A (phospho-acceptor) domain Tpau_0407 PF08448 PAS fold Tpau_0407 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tpau_0407 PF00072 Response regulator receiver domain Tpau_0408 PF00107 Zinc-binding dehydrogenase Tpau_0408 PF08240 Alcohol dehydrogenase GroES-like domain Tpau_0417 PF01757 Acyltransferase family Tpau_0418 PF11847 Alpha-(1->3)-arabinofuranosyltransferase Tpau_0423 PF01915 Glycosyl hydrolase family 3 C-terminal domain Tpau_0423 PF00933 Glycosyl hydrolase family 3 N terminal domain Tpau_0424 PF08359 YsiA-like protein, C-terminal region Tpau_0424 PF00440 Bacterial regulatory proteins, tetR family Tpau_0428 PF00108 Thiolase, N-terminal domain Tpau_0428 PF02803 Thiolase, C-terminal domain Tpau_0429 PF13380 CoA binding domain Tpau_0434 PF02770 Acyl-CoA dehydrogenase, middle domain Tpau_0434 PF12806 Acetyl-CoA dehydrogenase C-terminal like Tpau_0434 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Tpau_0434 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Tpau_0436 PF01261 Xylose isomerase-like TIM barrel Tpau_0438 PF07690 Major Facilitator Superfamily Tpau_0444 PF13193 AMP-binding enzyme C-terminal domain Tpau_0444 PF00501 AMP-binding enzyme Tpau_0446 PF00027 Cyclic nucleotide-binding domain Tpau_0446 PF04960 Glutaminase Tpau_0447 PF00202 Aminotransferase class-III Tpau_0449 PF00199 Catalase Tpau_0449 PF06628 Catalase-related immune-responsive Tpau_0450 PF01048 Phosphorylase superfamily Tpau_0454 PF00324 Amino acid permease Tpau_0456 PF07690 Major Facilitator Superfamily Tpau_0458 PF00324 Amino acid permease Tpau_0459 PF00692 dUTPase Tpau_0465 PF02665 Nitrate reductase gamma subunit Tpau_0465 PF13183 4Fe-4S dicluster domain Tpau_0465 PF02754 Cysteine-rich domain Tpau_0470 PF03372 Endonuclease/Exonuclease/phosphatase family Tpau_0482 PF13649 Methyltransferase domain Tpau_0483 PF00149 Calcineurin-like phosphoesterase Tpau_0484 PF01593 Flavin containing amine oxidoreductase Tpau_0485 PF00403 Heavy-metal-associated domain Tpau_0486 PF00012 Hsp70 protein Tpau_0487 PF01025 GrpE Tpau_0488 PF00684 DnaJ central domain Tpau_0488 PF01556 DnaJ C terminal domain Tpau_0488 PF00226 DnaJ domain Tpau_0489 PF13411 MerR HTH family regulatory protein Tpau_0492 PF00175 Oxidoreductase NAD-binding domain Tpau_0492 PF00111 2Fe-2S iron-sulfur cluster binding domain Tpau_0492 PF00970 Oxidoreductase FAD-binding domain Tpau_0494 PF17871 AAA lid domain Tpau_0494 PF10431 C-terminal, D2-small domain, of ClpB protein Tpau_0494 PF07724 AAA domain (Cdc48 subfamily) Tpau_0494 PF00004 ATPase family associated with various cellular activities (AAA) Tpau_0494 PF02861 Clp amino terminal domain, pathogenicity island component Tpau_0495 PF00561 alpha/beta hydrolase fold Tpau_0498 PF00465 Iron-containing alcohol dehydrogenase Tpau_0500 PF02656 Domain of unknown function (DUF202) Tpau_0503 PF00156 Phosphoribosyl transferase domain Tpau_0504 PF08032 RNA 2'-O ribose methyltransferase substrate binding Tpau_0504 PF00588 SpoU rRNA Methylase family Tpau_0507 PF12848 ABC transporter Tpau_0507 PF16326 ABC transporter C-terminal domain Tpau_0507 PF00005 ABC transporter Tpau_0508 PF09335 SNARE associated Golgi protein Tpau_0509 PF09335 SNARE associated Golgi protein Tpau_0510 PF00999 Sodium/hydrogen exchanger family Tpau_0511 PF01116 Fructose-bisphosphate aldolase class-II Tpau_0517 PF00709 Adenylosuccinate synthetase Tpau_0519 PF10738 Probable lipoprotein LpqN Tpau_0520 PF00486 Transcriptional regulatory protein, C terminal Tpau_0520 PF00072 Response regulator receiver domain Tpau_0521 PF00672 HAMP domain Tpau_0521 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tpau_0521 PF00512 His Kinase A (phospho-acceptor) domain Tpau_0522 PF01427 D-ala-D-ala dipeptidase Tpau_0523 PF07478 D-ala D-ala ligase C-terminus Tpau_0523 PF01820 D-ala D-ala ligase N-terminus Tpau_0524 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Tpau_0524 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Tpau_0525 PF00294 pfkB family carbohydrate kinase Tpau_0526 PF00083 Sugar (and other) transporter Tpau_0527 PF01370 NAD dependent epimerase/dehydratase family Tpau_0527 PF02222 ATP-grasp domain Tpau_0528 PF00398 Ribosomal RNA adenine dimethylase Tpau_0533 PF07992 Pyridine nucleotide-disulphide oxidoreductase Tpau_0536 PF01053 Cys/Met metabolism PLP-dependent enzyme Tpau_0537 PF03932 CutC family Tpau_0543 PF01139 tRNA-splicing ligase RtcB Tpau_0544 PF13344 Haloacid dehalogenase-like hydrolase Tpau_0545 PF00210 Ferritin-like domain Tpau_0546 PF00266 Aminotransferase class-V Tpau_0548 PF04073 Aminoacyl-tRNA editing domain Tpau_0548 PF03129 Anticodon binding domain Tpau_0548 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Tpau_0550 PF07690 Major Facilitator Superfamily Tpau_0552 PF00719 Inorganic pyrophosphatase Tpau_0553 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family Tpau_0555 PF09179 TilS substrate binding domain Tpau_0555 PF01171 PP-loop family Tpau_0557 PF01425 Amidase Tpau_0559 PF00004 ATPase family associated with various cellular activities (AAA) Tpau_0559 PF17862 AAA+ lid domain Tpau_0559 PF01434 Peptidase family M41 Tpau_0560 PF01227 GTP cyclohydrolase I Tpau_0561 PF00809 Pterin binding enzyme Tpau_0562 PF02152 Dihydroneopterin aldolase Tpau_0563 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) Tpau_0567 PF02569 Pantoate-beta-alanine ligase Tpau_0568 PF02261 Aspartate decarboxylase Tpau_0569 PF03309 Type III pantothenate kinase Tpau_0571 PF01921 tRNA synthetases class I (K) Tpau_0572 PF11774 Lsr2 Tpau_0573 PF17871 AAA lid domain Tpau_0573 PF00004 ATPase family associated with various cellular activities (AAA) Tpau_0573 PF10431 C-terminal, D2-small domain, of ClpB protein Tpau_0573 PF02861 Clp amino terminal domain, pathogenicity island component Tpau_0573 PF07724 AAA domain (Cdc48 subfamily) Tpau_0576 PF01613 Flavin reductase like domain Tpau_0580 PF07992 Pyridine nucleotide-disulphide oxidoreductase Tpau_0580 PF00724 NADH:flavin oxidoreductase / NADH oxidase family Tpau_0582 PF00106 short chain dehydrogenase Tpau_0586 PF03992 Antibiotic biosynthesis monooxygenase Tpau_0587 PF00561 alpha/beta hydrolase fold Tpau_0588 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain Tpau_0588 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain Tpau_0589 PF00106 short chain dehydrogenase Tpau_0590 PF00440 Bacterial regulatory proteins, tetR family Tpau_0590 PF17926 Tetracyclin repressor-like, C-terminal domain Tpau_0593 PF00106 short chain dehydrogenase Tpau_0595 PF00730 HhH-GPD superfamily base excision DNA repair protein Tpau_0595 PF00633 Helix-hairpin-helix motif Tpau_0596 PF00484 Carbonic anhydrase Tpau_0598 PF12826 Helix-hairpin-helix motif Tpau_0598 PF10635 DisA bacterial checkpoint controller linker region Tpau_0598 PF02457 DisA bacterial checkpoint controller nucleotide-binding Tpau_0599 PF06745 KaiC Tpau_0599 PF18073 Rubredoxin metal binding domain Tpau_0601 PF02559 CarD-like/TRCF domain Tpau_0602 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Tpau_0603 PF02542 YgbB family Tpau_0604 PF00892 EamA-like transporter family Tpau_0605 PF01406 tRNA synthetases class I (C) catalytic domain Tpau_0605 PF09190 DALR domain Tpau_0606 PF00588 SpoU rRNA Methylase family Tpau_0606 PF08032 RNA 2'-O ribose methyltransferase substrate binding Tpau_0608 PF03746 LamB/YcsF family Tpau_0609 PF00950 ABC 3 transport family Tpau_0610 PF00005 ABC transporter Tpau_0615 PF00775 Dioxygenase Tpau_0615 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal Tpau_0616 PF00775 Dioxygenase Tpau_0617 PF10397 Adenylosuccinate lyase C-terminus Tpau_0617 PF00206 Lyase Tpau_0618 PF02627 Carboxymuconolactone decarboxylase family Tpau_0619 PF02803 Thiolase, C-terminal domain Tpau_0619 PF00108 Thiolase, N-terminal domain Tpau_0620 PF01144 Coenzyme A transferase Tpau_0621 PF01144 Coenzyme A transferase Tpau_0622 PF01614 Bacterial transcriptional regulator Tpau_0622 PF09339 IclR helix-turn-helix domain Tpau_0623 PF07690 Major Facilitator Superfamily Tpau_0624 PF05726 Pirin C-terminal cupin domain Tpau_0624 PF02678 Pirin Tpau_0626 PF00561 alpha/beta hydrolase fold Tpau_0627 PF00534 Glycosyl transferases group 1 Tpau_0627 PF13579 Glycosyl transferase 4-like domain Tpau_0628 PF10722 Putative bacterial sensory transduction regulator Tpau_0629 PF07690 Major Facilitator Superfamily Tpau_0631 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase Tpau_0632 PF00440 Bacterial regulatory proteins, tetR family Tpau_0633 PF07690 Major Facilitator Superfamily Tpau_0634 PF06779 Uncharacterised MFS-type transporter YbfB Tpau_0635 PF00248 Aldo/keto reductase family Tpau_0637 PF04978 Protein of unknown function (DUF664) Tpau_0639 PF00005 ABC transporter Tpau_0640 PF13649 Methyltransferase domain Tpau_0641 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Tpau_0641 PF03466 LysR substrate binding domain Tpau_0642 PF07690 Major Facilitator Superfamily Tpau_0643 PF00296 Luciferase-like monooxygenase Tpau_0646 PF00005 ABC transporter Tpau_0646 PF02687 FtsX-like permease family Tpau_0646 PF12704 MacB-like periplasmic core domain Tpau_0647 PF00196 Bacterial regulatory proteins, luxR family Tpau_0647 PF00072 Response regulator receiver domain Tpau_0649 PF04072 Leucine carboxyl methyltransferase Tpau_0651 PF00300 Histidine phosphatase superfamily (branch 1) Tpau_0653 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tpau_0653 PF00512 His Kinase A (phospho-acceptor) domain Tpau_0654 PF00072 Response regulator receiver domain Tpau_0654 PF00486 Transcriptional regulatory protein, C terminal Tpau_0656 PF02541 Ppx/GppA phosphatase family Tpau_0658 PF01261 Xylose isomerase-like TIM barrel Tpau_0660 PF14748 Pyrroline-5-carboxylate reductase dimerisation Tpau_0660 PF03807 NADP oxidoreductase coenzyme F420-dependent Tpau_0661 PF12728 Helix-turn-helix domain Tpau_0662 PF08213 Mitochondrial domain of unknown function (DUF1713) Tpau_0663 PF01370 NAD dependent epimerase/dehydratase family Tpau_0664 PF01553 Acyltransferase Tpau_0666 PF05768 Glutaredoxin-like domain (DUF836) Tpau_0667 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain Tpau_0667 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain Tpau_0667 PF01488 Shikimate / quinate 5-dehydrogenase Tpau_0668 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain Tpau_0668 PF03900 Porphobilinogen deaminase, C-terminal domain Tpau_0669 PF10414 Sirohaem synthase dimerisation region Tpau_0669 PF14824 Sirohaem biosynthesis protein central Tpau_0669 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Tpau_0670 PF00490 Delta-aminolevulinic acid dehydratase Tpau_0673 PF00293 NUDIX domain Tpau_0673 PF13344 Haloacid dehalogenase-like hydrolase Tpau_0674 PF00403 Heavy-metal-associated domain Tpau_0676 PF03176 MMPL family Tpau_0679 PF13520 Amino acid permease Tpau_0680 PF01425 Amidase Tpau_0681 PF04371 Porphyromonas-type peptidyl-arginine deiminase Tpau_0682 PF01593 Flavin containing amine oxidoreductase Tpau_0684 PF00135 Carboxylesterase family Tpau_0685 PF06974 Protein of unknown function (DUF1298) Tpau_0685 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain Tpau_0686 PF02668 Taurine catabolism dioxygenase TauD, TfdA family Tpau_0687 PF00202 Aminotransferase class-III Tpau_0688 PF00300 Histidine phosphatase superfamily (branch 1) Tpau_0689 PF00578 AhpC/TSA family Tpau_0690 PF02683 Cytochrome C biogenesis protein transmembrane region Tpau_0692 PF01578 Cytochrome C assembly protein Tpau_0695 PF00291 Pyridoxal-phosphate dependent enzyme Tpau_0697 PF02525 Flavodoxin-like fold Tpau_0699 PF00106 short chain dehydrogenase Tpau_0701 PF01040 UbiA prenyltransferase family Tpau_0702 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Tpau_0702 PF02770 Acyl-CoA dehydrogenase, middle domain Tpau_0702 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Tpau_0702 PF12806 Acetyl-CoA dehydrogenase C-terminal like Tpau_0704 PF00501 AMP-binding enzyme Tpau_0704 PF13193 AMP-binding enzyme C-terminal domain Tpau_0708 PF01384 Phosphate transporter family Tpau_0709 PF00486 Transcriptional regulatory protein, C terminal Tpau_0709 PF03704 Bacterial transcriptional activator domain Tpau_0711 PF01230 HIT domain Tpau_0717 PF00378 Enoyl-CoA hydratase/isomerase Tpau_0719 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Tpau_0719 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Tpau_0720 PF13378 Enolase C-terminal domain-like Tpau_0720 PF18374 Enolase N-terminal domain-like Tpau_0724 PF03176 MMPL family Tpau_0725 PF02583 Metal-sensitive transcriptional repressor Tpau_0726 PF03435 Saccharopine dehydrogenase NADP binding domain Tpau_0729 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Tpau_0729 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Tpau_0731 PF13439 Glycosyltransferase Family 4 Tpau_0731 PF00534 Glycosyl transferases group 1 Tpau_0732 PF01209 ubiE/COQ5 methyltransferase family Tpau_0733 PF00348 Polyprenyl synthetase Tpau_0734 PF01435 Peptidase family M48 Tpau_0736 PF04461 Protein of unknown function (DUF520) Tpau_0737 PF00471 Ribosomal protein L33 Tpau_0738 PF13452 N-terminal half of MaoC dehydratase Tpau_0739 PF01575 MaoC like domain Tpau_0740 PF00584 SecE/Sec61-gamma subunits of protein translocation complex Tpau_0741 PF02357 Transcription termination factor nusG Tpau_0742 PF00298 Ribosomal protein L11, RNA binding domain Tpau_0742 PF03946 Ribosomal protein L11, N-terminal domain Tpau_0743 PF00687 Ribosomal protein L1p/L10e family Tpau_0750 PF00466 Ribosomal protein L10 Tpau_0751 PF00542 Ribosomal protein L7/L12 C-terminal domain Tpau_0751 PF16320 Ribosomal protein L7/L12 dimerisation domain Tpau_0752 PF00005 ABC transporter Tpau_0753 PF00562 RNA polymerase Rpb2, domain 6 Tpau_0753 PF04565 RNA polymerase Rpb2, domain 3 Tpau_0753 PF04560 RNA polymerase Rpb2, domain 7 Tpau_0753 PF04561 RNA polymerase Rpb2, domain 2 Tpau_0753 PF04563 RNA polymerase beta subunit Tpau_0753 PF10385 RNA polymerase beta subunit external 1 domain Tpau_0754 PF04998 RNA polymerase Rpb1, domain 5 Tpau_0754 PF05000 RNA polymerase Rpb1, domain 4 Tpau_0754 PF04983 RNA polymerase Rpb1, domain 3 Tpau_0754 PF00623 RNA polymerase Rpb1, domain 2 Tpau_0754 PF04997 RNA polymerase Rpb1, domain 1 Tpau_0758 PF01070 FMN-dependent dehydrogenase Tpau_0759 PF01557 Fumarylacetoacetate (FAA) hydrolase family Tpau_0760 PF13378 Enolase C-terminal domain-like Tpau_0760 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Tpau_0762 PF00248 Aldo/keto reductase family Tpau_0763 PF00392 Bacterial regulatory proteins, gntR family Tpau_0763 PF07729 FCD domain Tpau_0770 PF00271 Helicase conserved C-terminal domain Tpau_0770 PF00176 SNF2 family N-terminal domain Tpau_0770 PF12419 SNF2 Helicase protein Tpau_0772 PF00083 Sugar (and other) transporter Tpau_0775 PF02803 Thiolase, C-terminal domain Tpau_0775 PF00108 Thiolase, N-terminal domain Tpau_0778 PF12146 Serine aminopeptidase, S33 Tpau_0779 PF02733 Dak1 domain Tpau_0779 PF02734 DAK2 domain Tpau_0780 PF00300 Histidine phosphatase superfamily (branch 1) Tpau_0784 PF00753 Metallo-beta-lactamase superfamily Tpau_0784 PF16123 Hydroxyacylglutathione hydrolase C-terminus Tpau_0785 PF00583 Acetyltransferase (GNAT) family Tpau_0786 PF00211 Adenylate and Guanylate cyclase catalytic domain Tpau_0786 PF00672 HAMP domain Tpau_0789 PF01425 Amidase Tpau_0790 PF00528 Binding-protein-dependent transport system inner membrane component Tpau_0791 PF00005 ABC transporter Tpau_0793 PF02567 Phenazine biosynthesis-like protein Tpau_0794 PF01979 Amidohydrolase family Tpau_0795 PF02378 Phosphotransferase system, EIIC Tpau_0795 PF00367 phosphotransferase system, EIIB Tpau_0796 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 Tpau_0796 PF00367 phosphotransferase system, EIIB Tpau_0797 PF02378 Phosphotransferase system, EIIC Tpau_0797 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 Tpau_0797 PF00367 phosphotransferase system, EIIB Tpau_0800 PF03060 Nitronate monooxygenase Tpau_0803 PF00296 Luciferase-like monooxygenase Tpau_0804 PF00155 Aminotransferase class I and II Tpau_0809 PF00271 Helicase conserved C-terminal domain Tpau_0809 PF04851 Type III restriction enzyme, res subunit Tpau_0814 PF04542 Sigma-70 region 2 Tpau_0814 PF08281 Sigma-70, region 4 Tpau_0817 PF01967 MoaC family Tpau_0818 PF00994 Probable molybdopterin binding domain Tpau_0818 PF01967 MoaC family Tpau_0819 PF02391 MoaE protein Tpau_0820 PF04101 Glycosyltransferase family 28 C-terminal domain Tpau_0821 PF06737 Transglycosylase-like domain Tpau_0823 PF04055 Radical SAM superfamily Tpau_0823 PF06463 Molybdenum Cofactor Synthesis C Tpau_0825 PF00313 'Cold-shock' DNA-binding domain Tpau_0828 PF07690 Major Facilitator Superfamily Tpau_0829 PF11228 Protein of unknown function (DUF3027) Tpau_0833 PF01047 MarR family Tpau_0834 PF13530 Sterol carrier protein domain Tpau_0834 PF17668 Acetyltransferase (GNAT) domain Tpau_0835 PF00588 SpoU rRNA Methylase family Tpau_0837 PF00392 Bacterial regulatory proteins, gntR family Tpau_0837 PF00155 Aminotransferase class I and II Tpau_0838 PF00795 Carbon-nitrogen hydrolase Tpau_0839 PF01979 Amidohydrolase family Tpau_0841 PF00202 Aminotransferase class-III Tpau_0842 PF00171 Aldehyde dehydrogenase family Tpau_0843 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin Tpau_0844 PF05977 Transmembrane secretion effector Tpau_0846 PF11268 Protein of unknown function (DUF3071) Tpau_0847 PF00266 Aminotransferase class-V Tpau_0848 PF00285 Citrate synthase, C-terminal domain Tpau_0849 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region Tpau_0849 PF01243 Pyridoxamine 5'-phosphate oxidase Tpau_0850 PF07690 Major Facilitator Superfamily Tpau_0851 PF00106 short chain dehydrogenase Tpau_0852 PF00106 short chain dehydrogenase Tpau_0853 PF00440 Bacterial regulatory proteins, tetR family Tpau_0855 PF00285 Citrate synthase, C-terminal domain Tpau_0856 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Tpau_0858 PF01566 Natural resistance-associated macrophage protein Tpau_0858 PF03358 NADPH-dependent FMN reductase Tpau_0860 PF01039 Carboxyl transferase domain Tpau_0861 PF00248 Aldo/keto reductase family Tpau_0863 PF00082 Subtilase family Tpau_0865 PF01580 FtsK/SpoIIIE family Tpau_0869 PF00572 Ribosomal protein L13 Tpau_0870 PF00380 Ribosomal protein S9/S16 Tpau_0871 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Tpau_0871 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Tpau_0871 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Tpau_0871 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Tpau_0872 PF13419 Haloacid dehalogenase-like hydrolase Tpau_0877 PF03853 YjeF-related protein N-terminus Tpau_0877 PF01256 Carbohydrate kinase Tpau_0878 PF00842 Alanine racemase, C-terminal domain Tpau_0878 PF01168 Alanine racemase, N-terminal domain Tpau_0880 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE Tpau_0882 PF01329 Pterin 4 alpha carbinolamine dehydratase Tpau_0883 PF00814 Glycoprotease family Tpau_0883 PF00583 Acetyltransferase (GNAT) family Tpau_0885 PF00814 Glycoprotease family Tpau_0887 PF07690 Major Facilitator Superfamily Tpau_0889 PF12852 Cupin Tpau_0889 PF12833 Helix-turn-helix domain Tpau_0892 PF07690 Major Facilitator Superfamily Tpau_0898 PF00166 Chaperonin 10 Kd subunit Tpau_0899 PF00118 TCP-1/cpn60 chaperonin family Tpau_0900 PF00296 Luciferase-like monooxygenase Tpau_0901 PF02467 Transcription factor WhiB Tpau_0903 PF04542 Sigma-70 region 2 Tpau_0903 PF08281 Sigma-70, region 4 Tpau_0905 PF17252 Family of unknown function (DUF5319) Tpau_0906 PF00571 CBS domain Tpau_0906 PF00478 IMP dehydrogenase / GMP reductase domain Tpau_0907 PF00478 IMP dehydrogenase / GMP reductase domain Tpau_0908 PF05199 GMC oxidoreductase Tpau_0910 PF00958 GMP synthase C terminal domain Tpau_0910 PF00117 Glutamine amidotransferase class-I Tpau_0910 PF02540 NAD synthase Tpau_0915 PF00196 Bacterial regulatory proteins, luxR family Tpau_0915 PF00072 Response regulator receiver domain Tpau_0916 PF03793 PASTA domain Tpau_0916 PF00069 Protein kinase domain Tpau_0918 PF00324 Amino acid permease Tpau_0921 PF01212 Beta-eliminating lyase Tpau_0931 PF02694 Uncharacterised BCR, YnfA/UPF0060 family Tpau_0932 PF02811 PHP domain Tpau_0932 PF07733 Bacterial DNA polymerase III alpha NTPase domain Tpau_0932 PF17657 Bacterial DNA polymerase III alpha subunit finger domain Tpau_0932 PF14579 Helix-hairpin-helix motif Tpau_0937 PF00364 Biotin-requiring enzyme Tpau_0937 PF02785 Biotin carboxylase C-terminal domain Tpau_0937 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Tpau_0937 PF00682 HMGL-like Tpau_0937 PF02436 Conserved carboxylase domain Tpau_0937 PF00289 Biotin carboxylase, N-terminal domain Tpau_0939 PF00588 SpoU rRNA Methylase family Tpau_0941 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain Tpau_0941 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Tpau_0944 PF00561 alpha/beta hydrolase fold Tpau_0945 PF07690 Major Facilitator Superfamily Tpau_0948 PF03372 Endonuclease/Exonuclease/phosphatase family Tpau_0949 PF00579 tRNA synthetases class I (W and Y) Tpau_0951 PF13520 Amino acid permease Tpau_0952 PF00768 D-alanyl-D-alanine carboxypeptidase Tpau_0952 PF07943 Penicillin-binding protein 5, C-terminal domain Tpau_0953 PF12802 MarR family Tpau_0954 PF07690 Major Facilitator Superfamily Tpau_0958 PF07690 Major Facilitator Superfamily Tpau_0960 PF13732 Domain of unknown function (DUF4162) Tpau_0960 PF00005 ABC transporter Tpau_0964 PF13085 2Fe-2S iron-sulfur cluster binding domain Tpau_0965 PF02910 Fumarate reductase flavoprotein C-term Tpau_0965 PF00890 FAD binding domain Tpau_0967 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit Tpau_0968 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Tpau_0969 PF00591 Glycosyl transferase family, a/b domain Tpau_0969 PF02885 Glycosyl transferase family, helical bundle domain Tpau_0969 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain Tpau_0970 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Tpau_0970 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Tpau_0971 PF07730 Histidine kinase Tpau_0971 PF05384 Sensor protein DegS Tpau_0971 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tpau_0972 PF00196 Bacterial regulatory proteins, luxR family Tpau_0972 PF00072 Response regulator receiver domain Tpau_0975 PF02311 AraC-like ligand binding domain Tpau_0975 PF12833 Helix-turn-helix domain Tpau_0976 PF00962 Adenosine/AMP deaminase Tpau_0978 PF00877 NlpC/P60 family Tpau_0982 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Tpau_0982 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Tpau_0982 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Tpau_0982 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Tpau_0983 PF01048 Phosphorylase superfamily Tpau_0986 PF01546 Peptidase family M20/M25/M40 Tpau_0986 PF04107 Glutamate-cysteine ligase family 2(GCS2) Tpau_0989 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Tpau_0989 PF07992 Pyridine nucleotide-disulphide oxidoreductase Tpau_0990 PF04542 Sigma-70 region 2 Tpau_0990 PF12680 SnoaL-like domain Tpau_0990 PF08281 Sigma-70, region 4 Tpau_0992 PF00155 Aminotransferase class I and II Tpau_0992 PF00392 Bacterial regulatory proteins, gntR family Tpau_0993 PF00474 Sodium:solute symporter family Tpau_0995 PF08220 DeoR-like helix-turn-helix domain Tpau_0995 PF00455 DeoR C terminal sensor domain Tpau_0996 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain Tpau_0996 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain Tpau_0997 PF08544 GHMP kinases C terminal Tpau_0997 PF10509 Galactokinase galactose-binding signature Tpau_0997 PF00288 GHMP kinases N terminal domain Tpau_0998 PF02837 Glycosyl hydrolases family 2, sugar binding domain Tpau_0998 PF02929 Beta galactosidase small chain Tpau_0998 PF16353 Domain of unknown function(DUF4981) Tpau_0998 PF02836 Glycosyl hydrolases family 2, TIM barrel domain Tpau_0998 PF00703 Glycosyl hydrolases family 2 Tpau_1000 PF00528 Binding-protein-dependent transport system inner membrane component Tpau_1002 PF17912 MalK OB fold domain Tpau_1002 PF00005 ABC transporter Tpau_1005 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Tpau_1005 PF00370 FGGY family of carbohydrate kinases, N-terminal domain Tpau_1006 PF16901 C-terminal domain of alpha-glycerophosphate oxidase Tpau_1006 PF01266 FAD dependent oxidoreductase Tpau_1007 PF04235 Protein of unknown function (DUF418) Tpau_1007 PF07786 Protein of unknown function (DUF1624) Tpau_1009 PF00072 Response regulator receiver domain Tpau_1009 PF00196 Bacterial regulatory proteins, luxR family Tpau_1011 PF07690 Major Facilitator Superfamily Tpau_1014 PF00270 DEAD/DEAH box helicase Tpau_1014 PF00271 Helicase conserved C-terminal domain Tpau_1014 PF08494 DEAD/H associated Tpau_1015 PF00135 Carboxylesterase family Tpau_1017 PF18158 Adaptive response protein AidB N-terminal domain Tpau_1017 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Tpau_1017 PF02770 Acyl-CoA dehydrogenase, middle domain Tpau_1019 PF07969 Amidohydrolase family Tpau_1020 PF03358 NADPH-dependent FMN reductase Tpau_1022 PF13811 Domain of unknown function (DUF4186) Tpau_1025 PF01695 IstB-like ATP binding protein Tpau_1027 PF01042 Endoribonuclease L-PSP Tpau_1031 PF00289 Biotin carboxylase, N-terminal domain Tpau_1031 PF02785 Biotin carboxylase C-terminal domain Tpau_1031 PF00364 Biotin-requiring enzyme Tpau_1031 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Tpau_1033 PF02657 Fe-S metabolism associated domain Tpau_1034 PF00581 Rhodanese-like domain Tpau_1037 PF03033 Glycosyltransferase family 28 N-terminal domain Tpau_1041 PF02545 Maf-like protein Tpau_1043 PF01039 Carboxyl transferase domain Tpau_1044 PF02237 Biotin protein ligase C terminal domain Tpau_1044 PF03099 Biotin/lipoate A/B protein ligase family Tpau_1044 PF08279 HTH domain Tpau_1046 PF00486 Transcriptional regulatory protein, C terminal Tpau_1046 PF00072 Response regulator receiver domain Tpau_1047 PF00512 His Kinase A (phospho-acceptor) domain Tpau_1047 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tpau_1047 PF00672 HAMP domain Tpau_1049 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain Tpau_1049 PF02222 ATP-grasp domain Tpau_1050 PF00731 AIR carboxylase Tpau_1053 PF00753 Metallo-beta-lactamase superfamily Tpau_1058 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Tpau_1058 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Tpau_1058 PF02770 Acyl-CoA dehydrogenase, middle domain Tpau_1061 PF13399 LytR cell envelope-related transcriptional attenuator Tpau_1061 PF03816 Cell envelope-related transcriptional attenuator domain Tpau_1062 PF04321 RmlD substrate binding domain Tpau_1064 PF00483 Nucleotidyl transferase Tpau_1066 PF01596 O-methyltransferase Tpau_1067 PF04542 Sigma-70 region 2 Tpau_1067 PF08281 Sigma-70, region 4 Tpau_1069 PF13180 PDZ domain Tpau_1069 PF17820 PDZ domain Tpau_1070 PF02416 mttA/Hcf106 family Tpau_1073 PF01883 Iron-sulfur cluster assembly protein Tpau_1073 PF10609 NUBPL iron-transfer P-loop NTPase Tpau_1075 PF02223 Thymidylate kinase Tpau_1076 PF00486 Transcriptional regulatory protein, C terminal Tpau_1076 PF00072 Response regulator receiver domain Tpau_1077 PF00672 HAMP domain Tpau_1077 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tpau_1077 PF00512 His Kinase A (phospho-acceptor) domain Tpau_1078 PF10647 Lipoprotein LpqB beta-propeller domain Tpau_1078 PF10646 Sporulation and spore germination Tpau_1080 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein Tpau_1080 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus Tpau_1081 PF07517 SecA DEAD-like domain Tpau_1081 PF01043 SecA preprotein cross-linking domain Tpau_1081 PF07516 SecA Wing and Scaffold domain Tpau_1082 PF01553 Acyltransferase Tpau_1084 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain Tpau_1087 PF00111 2Fe-2S iron-sulfur cluster binding domain Tpau_1087 PF00175 Oxidoreductase NAD-binding domain Tpau_1087 PF00970 Oxidoreductase FAD-binding domain Tpau_1088 PF00487 Fatty acid desaturase Tpau_1090 PF00487 Fatty acid desaturase Tpau_1091 PF00487 Fatty acid desaturase Tpau_1092 PF07992 Pyridine nucleotide-disulphide oxidoreductase Tpau_1095 PF01625 Peptide methionine sulfoxide reductase Tpau_1096 PF03193 RsgA GTPase Tpau_1097 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Tpau_1099 PF00376 MerR family regulatory protein Tpau_1099 PF09278 MerR, DNA binding Tpau_1100 PF02586 SOS response associated peptidase (SRAP) Tpau_1103 PF00171 Aldehyde dehydrogenase family Tpau_1104 PF00106 short chain dehydrogenase Tpau_1105 PF04073 Aminoacyl-tRNA editing domain Tpau_1107 PF08281 Sigma-70, region 4 Tpau_1107 PF04542 Sigma-70 region 2 Tpau_1108 PF13490 Putative zinc-finger Tpau_1109 PF07568 Histidine kinase Tpau_1109 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tpau_1109 PF12282 Signal transduction histidine kinase Tpau_1110 PF02467 Transcription factor WhiB Tpau_1111 PF00781 Diacylglycerol kinase catalytic domain Tpau_1113 PF00300 Histidine phosphatase superfamily (branch 1) Tpau_1114 PF13614 AAA domain Tpau_1118 PF00270 DEAD/DEAH box helicase Tpau_1118 PF00271 Helicase conserved C-terminal domain Tpau_1120 PF00440 Bacterial regulatory proteins, tetR family Tpau_1121 PF00561 alpha/beta hydrolase fold Tpau_1123 PF00581 Rhodanese-like domain Tpau_1123 PF00899 ThiF family Tpau_1124 PF00501 AMP-binding enzyme Tpau_1124 PF13193 AMP-binding enzyme C-terminal domain Tpau_1126 PF04075 F420H(2)-dependent quinone reductase Tpau_1130 PF12697 Alpha/beta hydrolase family Tpau_1132 PF13361 UvrD-like helicase C-terminal domain Tpau_1132 PF00580 UvrD/REP helicase N-terminal domain Tpau_1134 PF13936 Helix-turn-helix domain Tpau_1134 PF00665 Integrase core domain Tpau_1138 PF02254 TrkA-N domain Tpau_1138 PF07885 Ion channel Tpau_1139 PF00296 Luciferase-like monooxygenase Tpau_1142 PF00440 Bacterial regulatory proteins, tetR family Tpau_1145 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Tpau_1146 PF02585 GlcNAc-PI de-N-acetylase Tpau_1148 PF04055 Radical SAM superfamily Tpau_1150 PF01773 Na+ dependent nucleoside transporter N-terminus Tpau_1150 PF07662 Na+ dependent nucleoside transporter C-terminus Tpau_1151 PF00037 4Fe-4S binding domain Tpau_1152 PF00155 Aminotransferase class I and II Tpau_1153 PF05114 Protein of unknown function (DUF692) Tpau_1158 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle Tpau_1158 PF14602 Hexapeptide repeat of succinyl-transferase Tpau_1159 PF03448 MgtE intracellular N domain Tpau_1159 PF01769 Divalent cation transporter Tpau_1159 PF00571 CBS domain Tpau_1160 PF01546 Peptidase family M20/M25/M40 Tpau_1160 PF07687 Peptidase dimerisation domain Tpau_1161 PF03641 Possible lysine decarboxylase Tpau_1162 PF03641 Possible lysine decarboxylase Tpau_1163 PF13193 AMP-binding enzyme C-terminal domain Tpau_1163 PF00550 Phosphopantetheine attachment site Tpau_1163 PF00668 Condensation domain Tpau_1163 PF00501 AMP-binding enzyme Tpau_1164 PF00809 Pterin binding enzyme Tpau_1165 PF00535 Glycosyl transferase family 2 Tpau_1167 PF13411 MerR HTH family regulatory protein Tpau_1169 PF16363 GDP-mannose 4,6 dehydratase Tpau_1170 PF00440 Bacterial regulatory proteins, tetR family Tpau_1174 PF00534 Glycosyl transferases group 1 Tpau_1174 PF13439 Glycosyltransferase Family 4 Tpau_1175 PF00483 Nucleotidyl transferase Tpau_1177 PF01810 LysE type translocator Tpau_1180 PF00106 short chain dehydrogenase Tpau_1182 PF01996 F420-0:Gamma-glutamyl ligase Tpau_1182 PF00881 Nitroreductase family Tpau_1184 PF02467 Transcription factor WhiB Tpau_1187 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Tpau_1187 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Tpau_1187 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Tpau_1187 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Tpau_1189 PF01238 Phosphomannose isomerase type I Tpau_1191 PF13520 Amino acid permease Tpau_1192 PF05221 S-adenosyl-L-homocysteine hydrolase Tpau_1192 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain Tpau_1195 PF00571 CBS domain Tpau_1195 PF01769 Divalent cation transporter Tpau_1195 PF03448 MgtE intracellular N domain Tpau_1197 PF11583 P-aminobenzoate N-oxygenase AurF Tpau_1199 PF01547 Bacterial extracellular solute-binding protein Tpau_1200 PF00528 Binding-protein-dependent transport system inner membrane component Tpau_1201 PF00528 Binding-protein-dependent transport system inner membrane component Tpau_1202 PF17912 MalK OB fold domain Tpau_1202 PF00005 ABC transporter Tpau_1207 PF01544 CorA-like Mg2+ transporter protein Tpau_1209 PF00106 short chain dehydrogenase Tpau_1210 PF13977 BetI-type transcriptional repressor, C-terminal Tpau_1210 PF00440 Bacterial regulatory proteins, tetR family Tpau_1211 PF02779 Transketolase, pyrimidine binding domain Tpau_1211 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Tpau_1211 PF16078 2-oxoglutarate dehydrogenase N-terminus Tpau_1211 PF00676 Dehydrogenase E1 component Tpau_1211 PF16870 2-oxoglutarate dehydrogenase C-terminal Tpau_1213 PF03061 Thioesterase superfamily Tpau_1215 PF12419 SNF2 Helicase protein Tpau_1215 PF00271 Helicase conserved C-terminal domain Tpau_1215 PF00176 SNF2 family N-terminal domain Tpau_1218 PF13175 AAA ATPase domain Tpau_1220 PF07690 Major Facilitator Superfamily Tpau_1228 PF00750 tRNA synthetases class I (R) Tpau_1228 PF03485 Arginyl tRNA synthetase N terminal domain Tpau_1228 PF05746 DALR anticodon binding domain Tpau_1229 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Tpau_1229 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain Tpau_1230 PF03447 Homoserine dehydrogenase, NAD binding domain Tpau_1230 PF00742 Homoserine dehydrogenase Tpau_1230 PF01842 ACT domain Tpau_1231 PF00291 Pyridoxal-phosphate dependent enzyme Tpau_1232 PF00288 GHMP kinases N terminal domain Tpau_1232 PF08544 GHMP kinases C terminal Tpau_1233 PF07498 Rho termination factor, N-terminal domain Tpau_1233 PF07497 Rho termination factor, RNA-binding domain Tpau_1233 PF07498 Rho termination factor, N-terminal domain Tpau_1233 PF07497 Rho termination factor, RNA-binding domain Tpau_1233 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Tpau_1233 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Tpau_1234 PF00069 Protein kinase domain Tpau_1235 PF01197 Ribosomal protein L31 Tpau_1236 PF00472 RF-1 domain Tpau_1236 PF03462 PCRF domain Tpau_1237 PF05175 Methyltransferase small domain Tpau_1237 PF17827 PrmC N-terminal domain Tpau_1238 PF01300 Telomere recombination Tpau_1245 PF02405 Permease MlaE Tpau_1246 PF02405 Permease MlaE Tpau_1247 PF00953 Glycosyl transferase family 4 Tpau_1248 PF03899 ATP synthase I chain Tpau_1249 PF00119 ATP synthase A chain Tpau_1250 PF00137 ATP synthase subunit C Tpau_1251 PF00430 ATP synthase B/B' CF(0) Tpau_1252 PF00213 ATP synthase delta (OSCP) subunit Tpau_1252 PF00430 ATP synthase B/B' CF(0) Tpau_1253 PF00306 ATP synthase alpha/beta chain, C terminal domain Tpau_1253 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Tpau_1253 PF02874 ATP synthase alpha/beta family, beta-barrel domain Tpau_1254 PF00231 ATP synthase Tpau_1255 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Tpau_1255 PF02874 ATP synthase alpha/beta family, beta-barrel domain Tpau_1256 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain Tpau_1257 PF10739 Protein of unknown function (DUF2550) Tpau_1258 PF01923 Cobalamin adenosyltransferase Tpau_1259 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Tpau_1261 PF01939 Endonuclease NucS Tpau_1265 PF02803 Thiolase, C-terminal domain Tpau_1265 PF00108 Thiolase, N-terminal domain Tpau_1268 PF00085 Thioredoxin Tpau_1271 PF00528 Binding-protein-dependent transport system inner membrane component Tpau_1273 PF13193 AMP-binding enzyme C-terminal domain Tpau_1273 PF00501 AMP-binding enzyme Tpau_1275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Tpau_1275 PF03466 LysR substrate binding domain Tpau_1277 PF00753 Metallo-beta-lactamase superfamily Tpau_1278 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) Tpau_1278 PF00128 Alpha amylase, catalytic domain Tpau_1278 PF02806 Alpha amylase, C-terminal all-beta domain Tpau_1279 PF00128 Alpha amylase, catalytic domain Tpau_1279 PF11896 Domain of unknown function (DUF3416) Tpau_1280 PF13307 Helicase C-terminal domain Tpau_1281 PF03466 LysR substrate binding domain Tpau_1281 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Tpau_1285 PF00857 Isochorismatase family Tpau_1286 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain Tpau_1286 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain Tpau_1287 PF02617 ATP-dependent Clp protease adaptor protein ClpS Tpau_1288 PF09438 Domain of unknown function (DUF2017) Tpau_1289 PF14464 Prokaryotic homologs of the JAB domain Tpau_1290 PF02597 ThiS family Tpau_1291 PF00291 Pyridoxal-phosphate dependent enzyme Tpau_1292 PF01694 Rhomboid family Tpau_1294 PF03725 3' exoribonuclease family, domain 2 Tpau_1294 PF01138 3' exoribonuclease family, domain 1 Tpau_1295 PF01725 Ham1 family Tpau_1296 PF03816 Cell envelope-related transcriptional attenuator domain Tpau_1296 PF13399 LytR cell envelope-related transcriptional attenuator Tpau_1297 PF00082 Subtilase family Tpau_1297 PF05922 Peptidase inhibitor I9 Tpau_1301 PF12823 Domain of unknown function (DUF3817) Tpau_1304 PF00501 AMP-binding enzyme Tpau_1305 PF03880 DbpA RNA binding domain Tpau_1305 PF00271 Helicase conserved C-terminal domain Tpau_1305 PF00270 DEAD/DEAH box helicase Tpau_1306 PF13087 AAA domain Tpau_1306 PF13195 Protein of unknown function (DUF4011) Tpau_1306 PF13086 AAA domain Tpau_1308 PF00202 Aminotransferase class-III Tpau_1309 PF00171 Aldehyde dehydrogenase family Tpau_1310 PF08501 Shikimate dehydrogenase substrate binding domain Tpau_1314 PF02146 Sir2 family Tpau_1315 PF00698 Acyl transferase domain Tpau_1316 PF01648 4'-phosphopantetheinyl transferase superfamily Tpau_1317 PF00289 Biotin carboxylase, N-terminal domain Tpau_1317 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Tpau_1317 PF02785 Biotin carboxylase C-terminal domain Tpau_1320 PF13411 MerR HTH family regulatory protein Tpau_1321 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Tpau_1321 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Tpau_1321 PF02770 Acyl-CoA dehydrogenase, middle domain Tpau_1322 PF00578 AhpC/TSA family Tpau_1324 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Tpau_1324 PF03466 LysR substrate binding domain Tpau_1326 PF17964 Bacterial Ig domain Tpau_1326 PF03734 L,D-transpeptidase catalytic domain Tpau_1329 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Tpau_1329 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Tpau_1329 PF02770 Acyl-CoA dehydrogenase, middle domain Tpau_1330 PF03703 Bacterial PH domain Tpau_1331 PF03703 Bacterial PH domain Tpau_1334 PF00474 Sodium:solute symporter family Tpau_1336 PF00005 ABC transporter Tpau_1339 PF00929 Exonuclease Tpau_1340 PF05872 Bacterial protein of unknown function (DUF853) Tpau_1341 PF00106 short chain dehydrogenase Tpau_1342 PF07681 DoxX Tpau_1344 PF00724 NADH:flavin oxidoreductase / NADH oxidase family Tpau_1344 PF07992 Pyridine nucleotide-disulphide oxidoreductase Tpau_1349 PF03600 Citrate transporter Tpau_1350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tpau_1350 PF00989 PAS fold Tpau_1350 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain Tpau_1350 PF17203 Single cache domain 3 Tpau_1351 PF00072 Response regulator receiver domain Tpau_1351 PF12431 Transcriptional regulator Tpau_1353 PF00326 Prolyl oligopeptidase family Tpau_1354 PF13411 MerR HTH family regulatory protein Tpau_1356 PF00005 ABC transporter Tpau_1357 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Tpau_1357 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Tpau_1359 PF02653 Branched-chain amino acid transport system / permease component Tpau_1360 PF00005 ABC transporter Tpau_1361 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Tpau_1361 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Tpau_1362 PF01261 Xylose isomerase-like TIM barrel Tpau_1365 PF00294 pfkB family carbohydrate kinase Tpau_1367 PF00171 Aldehyde dehydrogenase family Tpau_1368 PF04962 KduI/IolB family Tpau_1369 PF00205 Thiamine pyrophosphate enzyme, central domain Tpau_1369 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Tpau_1369 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Tpau_1370 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Tpau_1370 PF02770 Acyl-CoA dehydrogenase, middle domain Tpau_1370 PF08028 Acyl-CoA dehydrogenase, C-terminal domain Tpau_1371 PF00296 Luciferase-like monooxygenase Tpau_1372 PF00296 Luciferase-like monooxygenase Tpau_1373 PF00501 AMP-binding enzyme Tpau_1373 PF07993 Male sterility protein Tpau_1373 PF00550 Phosphopantetheine attachment site Tpau_1376 PF07690 Major Facilitator Superfamily Tpau_1379 PF01077 Nitrite and sulphite reductase 4Fe-4S domain Tpau_1379 PF04324 BFD-like [2Fe-2S] binding domain Tpau_1379 PF07992 Pyridine nucleotide-disulphide oxidoreductase Tpau_1379 PF13806 Rieske-like [2Fe-2S] domain Tpau_1379 PF18267 Rubredoxin NAD+ reductase C-terminal domain Tpau_1379 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain Tpau_1380 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain Tpau_1380 PF01077 Nitrite and sulphite reductase 4Fe-4S domain Tpau_1380 PF18267 Rubredoxin NAD+ reductase C-terminal domain Tpau_1380 PF04324 BFD-like [2Fe-2S] binding domain Tpau_1380 PF07992 Pyridine nucleotide-disulphide oxidoreductase Tpau_1380 PF13806 Rieske-like [2Fe-2S] domain Tpau_1381 PF01568 Molydopterin dinucleotide binding domain Tpau_1381 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Tpau_1381 PF00384 Molybdopterin oxidoreductase Tpau_1382 PF02801 Beta-ketoacyl synthase, C-terminal domain Tpau_1382 PF00109 Beta-ketoacyl synthase, N-terminal domain Tpau_1382 PF16197 Ketoacyl-synthetase C-terminal extension Tpau_1382 PF08659 KR domain Tpau_1382 PF08240 Alcohol dehydrogenase GroES-like domain Tpau_1382 PF00698 Acyl transferase domain Tpau_1382 PF14765 Polyketide synthase dehydratase Tpau_1382 PF00550 Phosphopantetheine attachment site Tpau_1384 PF00005 ABC transporter Tpau_1384 PF12848 ABC transporter Tpau_1385 PF05088 Bacterial NAD-glutamate dehydrogenase Tpau_1390 PF16657 Maltogenic Amylase, C-terminal domain Tpau_1390 PF00128 Alpha amylase, catalytic domain Tpau_1391 PF01152 Bacterial-like globin Tpau_1392 PF00990 Diguanylate cyclase, GGDEF domain Tpau_1392 PF08447 PAS fold Tpau_1392 PF00563 EAL domain Tpau_1392 PF08448 PAS fold Tpau_1395 PF17174 Domain of unknown function (DUF5130) Tpau_1398 PF01433 Peptidase family M1 domain Tpau_1398 PF11838 ERAP1-like C-terminal domain Tpau_1399 PF01323 DSBA-like thioredoxin domain Tpau_1400 PF01435 Peptidase family M48 Tpau_1401 PF02502 Ribose/Galactose Isomerase Tpau_1402 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain Tpau_1402 PF06827 Zinc finger found in FPG and IleRS Tpau_1402 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain Tpau_1409 PF00378 Enoyl-CoA hydratase/isomerase Tpau_1410 PF00196 Bacterial regulatory proteins, luxR family Tpau_1410 PF00072 Response regulator receiver domain Tpau_1413 PF00067 Cytochrome P450 Tpau_1414 PF01593 Flavin containing amine oxidoreductase Tpau_1415 PF00795 Carbon-nitrogen hydrolase Tpau_1416 PF13520 Amino acid permease Tpau_1417 PF00491 Arginase family Tpau_1418 PF01381 Helix-turn-helix Tpau_1418 PF08671 Anti-repressor SinI Tpau_1419 PF00378 Enoyl-CoA hydratase/isomerase Tpau_1423 PF00589 Phage integrase family Tpau_1423 PF02899 Phage integrase, N-terminal SAM-like domain Tpau_1424 PF00239 Resolvase, N terminal domain Tpau_1441 PF07681 DoxX Tpau_1443 PF13520 Amino acid permease Tpau_1447 PF00463 Isocitrate lyase family Tpau_1448 PF03575 Peptidase family S51 Tpau_1450 PF01032 FecCD transport family Tpau_1451 PF00005 ABC transporter Tpau_1453 PF07883 Cupin domain Tpau_1453 PF01381 Helix-turn-helix Tpau_1454 PF03594 Benzoate membrane transport protein Tpau_1456 PF00083 Sugar (and other) transporter Tpau_1458 PF13302 Acetyltransferase (GNAT) domain Tpau_1460 PF05697 Bacterial trigger factor protein (TF) Tpau_1460 PF05698 Bacterial trigger factor protein (TF) C-terminus Tpau_1460 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Tpau_1461 PF00574 Clp protease Tpau_1462 PF00574 Clp protease Tpau_1463 PF10431 C-terminal, D2-small domain, of ClpB protein Tpau_1463 PF07724 AAA domain (Cdc48 subfamily) Tpau_1463 PF06689 ClpX C4-type zinc finger Tpau_1464 PF01636 Phosphotransferase enzyme family Tpau_1465 PF12848 ABC transporter Tpau_1465 PF00005 ABC transporter Tpau_1467 PF04228 Putative neutral zinc metallopeptidase Tpau_1468 PF10458 Valyl tRNA synthetase tRNA binding arm Tpau_1468 PF00133 tRNA synthetases class I (I, L, M and V) Tpau_1468 PF08264 Anticodon-binding domain of tRNA Tpau_1469 PF02875 Mur ligase family, glutamate ligase domain Tpau_1469 PF08245 Mur ligase middle domain Tpau_1471 PF00334 Nucleoside diphosphate kinase Tpau_1472 PF10150 Ribonuclease E/G family Tpau_1473 PF00829 Ribosomal prokaryotic L21 protein Tpau_1474 PF01016 Ribosomal L27 protein Tpau_1475 PF01018 GTP1/OBG Tpau_1475 PF09269 Domain of unknown function (DUF1967) Tpau_1475 PF01926 50S ribosome-binding GTPase Tpau_1476 PF00696 Amino acid kinase family Tpau_1476 PF01472 PUA domain Tpau_1477 PF11583 P-aminobenzoate N-oxygenase AurF Tpau_1478 PF00574 Clp protease Tpau_1479 PF00574 Clp protease Tpau_1481 PF14310 Fibronectin type III-like domain Tpau_1481 PF00933 Glycosyl hydrolase family 3 N terminal domain Tpau_1481 PF01915 Glycosyl hydrolase family 3 C-terminal domain Tpau_1482 PF02146 Sir2 family Tpau_1483 PF00083 Sugar (and other) transporter Tpau_1488 PF01643 Acyl-ACP thioesterase Tpau_1489 PF08206 Ribonuclease B OB domain Tpau_1489 PF00773 RNB domain Tpau_1491 PF01928 CYTH domain Tpau_1491 PF05235 CHAD domain Tpau_1492 PF00561 alpha/beta hydrolase fold Tpau_1493 PF02548 Ketopantoate hydroxymethyltransferase Tpau_1494 PF02540 NAD synthase Tpau_1494 PF00795 Carbon-nitrogen hydrolase Tpau_1497 PF03951 Glutamine synthetase, beta-Grasp domain Tpau_1497 PF00120 Glutamine synthetase, catalytic domain Tpau_1498 PF03710 Glutamate-ammonia ligase adenylyltransferase Tpau_1498 PF08335 GlnD PII-uridylyltransferase Tpau_1501 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase Tpau_1501 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Tpau_1502 PF08241 Methyltransferase domain Tpau_1506 PF00135 Carboxylesterase family Tpau_1510 PF00120 Glutamine synthetase, catalytic domain Tpau_1510 PF03951 Glutamine synthetase, beta-Grasp domain Tpau_1512 PF13829 Domain of unknown function (DUF4191) Tpau_1513 PF04055 Radical SAM superfamily Tpau_1513 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family Tpau_1514 PF07690 Major Facilitator Superfamily Tpau_1515 PF03099 Biotin/lipoate A/B protein ligase family Tpau_1516 PF01370 NAD dependent epimerase/dehydratase family Tpau_1516 PF08338 Domain of unknown function (DUF1731) Tpau_1517 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Tpau_1517 PF02817 e3 binding domain Tpau_1517 PF00364 Biotin-requiring enzyme Tpau_1518 PF00883 Cytosol aminopeptidase family, catalytic domain Tpau_1518 PF02789 Cytosol aminopeptidase family, N-terminal domain Tpau_1521 PF04030 D-arabinono-1,4-lactone oxidase Tpau_1521 PF01565 FAD binding domain Tpau_1523 PF08669 Glycine cleavage T-protein C-terminal barrel domain Tpau_1523 PF01571 Aminomethyltransferase folate-binding domain Tpau_1524 PF01063 Amino-transferase class IV Tpau_1526 PF02654 Cobalamin-5-phosphate synthase Tpau_1527 PF02277 Phosphoribosyltransferase Tpau_1529 PF02595 Glycerate kinase family Tpau_1530 PF01521 Iron-sulphur cluster biosynthesis Tpau_1531 PF00294 pfkB family carbohydrate kinase Tpau_1532 PF03006 Haemolysin-III related Tpau_1534 PF09278 MerR, DNA binding Tpau_1534 PF00376 MerR family regulatory protein Tpau_1536 PF00733 Asparagine synthase Tpau_1536 PF13537 Glutamine amidotransferase domain Tpau_1537 PF00116 Cytochrome C oxidase subunit II, periplasmic domain Tpau_1538 PF12270 Cytochrome c oxidase subunit IV Tpau_1540 PF00665 Integrase core domain Tpau_1540 PF13936 Helix-turn-helix domain Tpau_1543 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Tpau_1543 PF01842 ACT domain Tpau_1543 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Tpau_1544 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Tpau_1544 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Tpau_1545 PF00694 Aconitase C-terminal domain Tpau_1546 PF00330 Aconitase family (aconitate hydratase) Tpau_1553 PF00069 Protein kinase domain Tpau_1553 PF14032 PknH-like extracellular domain Tpau_1554 PF00324 Amino acid permease Tpau_1555 PF06339 Ectoine synthase Tpau_1556 PF00202 Aminotransferase class-III Tpau_1557 PF00583 Acetyltransferase (GNAT) family Tpau_1559 PF00294 pfkB family carbohydrate kinase Tpau_1560 PF00296 Luciferase-like monooxygenase Tpau_1562 PF07690 Major Facilitator Superfamily Tpau_1564 PF01467 Cytidylyltransferase-like Tpau_1566 PF02620 Large ribosomal RNA subunit accumulation protein YceD Tpau_1567 PF00035 Double-stranded RNA binding motif Tpau_1567 PF14622 Ribonuclease-III-like Tpau_1568 PF06827 Zinc finger found in FPG and IleRS Tpau_1568 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain Tpau_1568 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain Tpau_1570 PF02566 OsmC-like protein Tpau_1571 PF00708 Acylphosphatase Tpau_1573 PF03738 Glutathionylspermidine synthase preATP-grasp Tpau_1574 PF03994 Domain of Unknown Function (DUF350) Tpau_1576 PF00550 Phosphopantetheine attachment site Tpau_1577 PF00534 Glycosyl transferases group 1 Tpau_1577 PF13439 Glycosyltransferase Family 4 Tpau_1579 PF00534 Glycosyl transferases group 1 Tpau_1579 PF13439 Glycosyltransferase Family 4 Tpau_1580 PF13439 Glycosyltransferase Family 4 Tpau_1580 PF00534 Glycosyl transferases group 1 Tpau_1587 PF06470 SMC proteins Flexible Hinge Domain Tpau_1587 PF02463 RecF/RecN/SMC N terminal domain Tpau_1589 PF00183 Hsp90 protein Tpau_1593 PF09347 Domain of unknown function (DUF1989) Tpau_1594 PF02626 Carboxyltransferase domain, subdomain A and B Tpau_1595 PF01425 Amidase Tpau_1596 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain Tpau_1596 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase Tpau_1598 PF00296 Luciferase-like monooxygenase Tpau_1600 PF01497 Periplasmic binding protein Tpau_1601 PF00005 ABC transporter Tpau_1606 PF01494 FAD binding domain Tpau_1607 PF02881 SRP54-type protein, helical bundle domain Tpau_1607 PF00448 SRP54-type protein, GTPase domain Tpau_1608 PF00909 Ammonium Transporter Family Tpau_1609 PF00543 Nitrogen regulatory protein P-II Tpau_1610 PF08335 GlnD PII-uridylyltransferase Tpau_1610 PF01966 HD domain Tpau_1611 PF02978 Signal peptide binding domain Tpau_1611 PF02881 SRP54-type protein, helical bundle domain Tpau_1611 PF00448 SRP54-type protein, GTPase domain Tpau_1612 PF01979 Amidohydrolase family Tpau_1614 PF13411 MerR HTH family regulatory protein Tpau_1616 PF00282 Pyridoxal-dependent decarboxylase conserved domain Tpau_1617 PF00886 Ribosomal protein S16 Tpau_1619 PF05239 PRC-barrel domain Tpau_1619 PF01782 RimM N-terminal domain Tpau_1620 PF01746 tRNA (Guanine-1)-methyltransferase Tpau_1622 PF00072 Response regulator receiver domain Tpau_1622 PF00486 Transcriptional regulatory protein, C terminal Tpau_1623 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tpau_1623 PF00512 His Kinase A (phospho-acceptor) domain Tpau_1623 PF00672 HAMP domain Tpau_1628 PF09371 Tex-like protein N-terminal domain Tpau_1628 PF17674 HHH domain Tpau_1628 PF00575 S1 RNA binding domain Tpau_1628 PF16921 Tex protein YqgF-like domain Tpau_1630 PF01245 Ribosomal protein L19 Tpau_1631 PF10502 Signal peptidase, peptidase S26 Tpau_1632 PF01351 Ribonuclease HII Tpau_1633 PF10611 Protein of unknown function (DUF2469) Tpau_1636 PF00005 ABC transporter Tpau_1636 PF17912 MalK OB fold domain Tpau_1638 PF00528 Binding-protein-dependent transport system inner membrane component Tpau_1641 PF02021 Uncharacterised protein family UPF0102 Tpau_1642 PF01078 Magnesium chelatase, subunit ChlI Tpau_1642 PF13335 Magnesium chelatase, subunit ChlI C-terminal Tpau_1643 PF02481 DNA recombination-mediator protein A Tpau_1643 PF17782 DprA winged helix domain Tpau_1648 PF13276 HTH-like domain Tpau_1648 PF00665 Integrase core domain Tpau_1649 PF00083 Sugar (and other) transporter Tpau_1651 PF03180 NLPA lipoprotein Tpau_1652 PF09383 NIL domain Tpau_1652 PF00005 ABC transporter Tpau_1653 PF00528 Binding-protein-dependent transport system inner membrane component Tpau_1654 PF02899 Phage integrase, N-terminal SAM-like domain Tpau_1654 PF00589 Phage integrase family Tpau_1657 PF01551 Peptidase family M23 Tpau_1658 PF01435 Peptidase family M48 Tpau_1659 PF07690 Major Facilitator Superfamily Tpau_1660 PF00375 Sodium:dicarboxylate symporter family Tpau_1662 PF00440 Bacterial regulatory proteins, tetR family Tpau_1662 PF02909 Tetracyclin repressor-like, C-terminal domain Tpau_1663 PF00135 Carboxylesterase family Tpau_1666 PF00665 Integrase core domain Tpau_1666 PF13276 HTH-like domain Tpau_1668 PF00318 Ribosomal protein S2 Tpau_1669 PF00889 Elongation factor TS Tpau_1673 PF00696 Amino acid kinase family Tpau_1674 PF01765 Ribosome recycling factor Tpau_1678 PF04055 Radical SAM superfamily Tpau_1682 PF13288 DXP reductoisomerase C-terminal domain Tpau_1682 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain Tpau_1682 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase Tpau_1683 PF17820 PDZ domain Tpau_1683 PF02163 Peptidase family M50 Tpau_1684 PF04551 GcpE protein Tpau_1688 PF00106 short chain dehydrogenase Tpau_1690 PF00905 Penicillin binding protein transpeptidase domain Tpau_1692 PF00557 Metallopeptidase family M24 Tpau_1693 PF07685 CobB/CobQ-like glutamine amidotransferase domain Tpau_1693 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Tpau_1694 PF00561 alpha/beta hydrolase fold Tpau_1696 PF07992 Pyridine nucleotide-disulphide oxidoreductase Tpau_1696 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Tpau_1698 PF06039 Malate:quinone oxidoreductase (Mqo) Tpau_1699 PF13673 Acetyltransferase (GNAT) domain Tpau_1700 PF07728 AAA domain (dynein-related subfamily) Tpau_1700 PF17863 AAA lid domain Tpau_1700 PF13519 von Willebrand factor type A domain Tpau_1702 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Tpau_1702 PF07685 CobB/CobQ-like glutamine amidotransferase domain Tpau_1703 PF10414 Sirohaem synthase dimerisation region Tpau_1703 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Tpau_1704 PF07690 Major Facilitator Superfamily Tpau_1705 PF07690 Major Facilitator Superfamily Tpau_1706 PF03883 Peroxide stress protein YaaA Tpau_1707 PF03129 Anticodon binding domain Tpau_1707 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Tpau_1707 PF04073 Aminoacyl-tRNA editing domain Tpau_1708 PF18541 RuvC endonuclease subdomain 3 Tpau_1708 PF01844 HNH endonuclease Tpau_1708 PF18470 Cas9 alpha-helical lobe domain Tpau_1708 PF17894 Topo homolgy domain in CRISPR-associated endonuclease Cas9 Tpau_1708 PF17893 CRISPR-associated endonuclease Cas9 beta-hairpin domain Tpau_1708 PF18525 Cas9 C-terminal domain Tpau_1712 PF02576 RimP N-terminal domain Tpau_1712 PF17384 RimP C-terminal SH3 domain Tpau_1713 PF08529 NusA N-terminal domain Tpau_1713 PF13184 NusA-like KH domain Tpau_1715 PF04760 Translation initiation factor IF-2, N-terminal region Tpau_1715 PF11987 Translation-initiation factor 2 Tpau_1715 PF00009 Elongation factor Tu GTP binding domain Tpau_1717 PF02033 Ribosome-binding factor A Tpau_1718 PF01368 DHH family Tpau_1718 PF02272 DHHA1 domain Tpau_1721 PF03069 Acetamidase/Formamidase family Tpau_1726 PF01648 4'-phosphopantetheinyl transferase superfamily Tpau_1726 PF17837 4'-phosphopantetheinyl transferase N-terminal domain Tpau_1727 PF01509 TruB family pseudouridylate synthase (N terminal domain) Tpau_1727 PF16198 tRNA pseudouridylate synthase B C-terminal domain Tpau_1727 PF09142 tRNA Pseudouridine synthase II, C terminal Tpau_1729 PF00285 Citrate synthase, C-terminal domain Tpau_1730 PF00285 Citrate synthase, C-terminal domain Tpau_1732 PF01325 Iron dependent repressor, N-terminal DNA binding domain Tpau_1732 PF02742 Iron dependent repressor, metal binding and dimerisation domain Tpau_1732 PF18357 Diphteria toxin repressor SH3 domain Tpau_1733 PF06574 FAD synthetase Tpau_1733 PF01687 Riboflavin kinase Tpau_1734 PF00312 Ribosomal protein S15 Tpau_1735 PF09423 PhoD-like phosphatase Tpau_1735 PF16655 PhoD-like phosphatase, N-terminal domain Tpau_1737 PF09924 Uncharacterised conserved protein (DUF2156) Tpau_1737 PF16995 Transmembrane region of lysyl-tRNA synthetase Tpau_1737 PF01336 OB-fold nucleic acid binding domain Tpau_1737 PF00152 tRNA synthetases class II (D, K and N) Tpau_1738 PF00013 KH domain Tpau_1738 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain Tpau_1738 PF00575 S1 RNA binding domain Tpau_1738 PF01138 3' exoribonuclease family, domain 1 Tpau_1739 PF00675 Insulinase (Peptidase family M16) Tpau_1739 PF05193 Peptidase M16 inactive domain Tpau_1741 PF00324 Amino acid permease Tpau_1743 PF01262 Alanine dehydrogenase/PNT, C-terminal domain Tpau_1743 PF05222 Alanine dehydrogenase/PNT, N-terminal domain Tpau_1744 PF01037 Lrp/AsnC ligand binding domain Tpau_1746 PF07969 Amidohydrolase family Tpau_1747 PF02678 Pirin Tpau_1747 PF17954 Quercetinase C-terminal cupin domain Tpau_1749 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) Tpau_1751 PF03176 MMPL family Tpau_1752 PF00004 ATPase family associated with various cellular activities (AAA) Tpau_1752 PF01434 Peptidase family M41 Tpau_1752 PF17862 AAA+ lid domain Tpau_1756 PF01113 Dihydrodipicolinate reductase, N-terminus Tpau_1756 PF05173 Dihydrodipicolinate reductase, C-terminus Tpau_1760 PF00303 Thymidylate synthase Tpau_1761 PF00186 Dihydrofolate reductase Tpau_1762 PF00701 Dihydrodipicolinate synthetase family Tpau_1763 PF17770 Ribonuclease J C-terminal domain Tpau_1763 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain Tpau_1763 PF12706 Beta-lactamase superfamily domain Tpau_1771 PF01580 FtsK/SpoIIIE family Tpau_1771 PF09397 Ftsk gamma domain Tpau_1771 PF17854 FtsK alpha domain Tpau_1771 PF13491 4TM region of DNA translocase FtsK/SpoIIIE Tpau_1772 PF03741 Integral membrane protein TerC family Tpau_1773 PF13847 Methyltransferase domain Tpau_1773 PF17827 PrmC N-terminal domain Tpau_1774 PF00583 Acetyltransferase (GNAT) family Tpau_1776 PF02464 Competence-damaged protein Tpau_1776 PF00994 Probable molybdopterin binding domain Tpau_1776 PF18146 Damage-inducible protein CinA KH domain Tpau_1781 PF06722 Protein of unknown function (DUF1205) Tpau_1783 PF04602 Mycobacterial cell wall arabinan synthesis protein Tpau_1783 PF14896 EmbC C-terminal domain Tpau_1783 PF17689 Arabinosyltransferase concanavalin like domain Tpau_1785 PF00154 recA bacterial DNA recombination protein Tpau_1786 PF02631 RecX family Tpau_1788 PF00528 Binding-protein-dependent transport system inner membrane component Tpau_1789 PF00528 Binding-protein-dependent transport system inner membrane component Tpau_1790 PF00497 Bacterial extracellular solute-binding proteins, family 3 Tpau_1791 PF00005 ABC transporter Tpau_1793 PF04055 Radical SAM superfamily Tpau_1793 PF00919 Uncharacterized protein family UPF0004 Tpau_1795 PF00005 ABC transporter Tpau_1796 PF03993 Domain of Unknown Function (DUF349) Tpau_1799 PF01678 Diaminopimelate epimerase Tpau_1800 PF01926 50S ribosome-binding GTPase Tpau_1800 PF13167 GTP-binding GTPase N-terminal Tpau_1800 PF16360 GTP-binding GTPase Middle Region Tpau_1802 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Tpau_1802 PF03466 LysR substrate binding domain Tpau_1806 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Tpau_1806 PF02770 Acyl-CoA dehydrogenase, middle domain Tpau_1806 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Tpau_1807 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Tpau_1807 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Tpau_1807 PF02770 Acyl-CoA dehydrogenase, middle domain Tpau_1808 PF01726 LexA DNA binding domain Tpau_1808 PF00717 Peptidase S24-like Tpau_1810 PF03477 ATP cone domain Tpau_1811 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold Tpau_1811 PF00270 DEAD/DEAH box helicase Tpau_1811 PF04408 Helicase associated domain (HA2) Tpau_1811 PF11898 Domain of unknown function (DUF3418) Tpau_1811 PF00271 Helicase conserved C-terminal domain Tpau_1812 PF00202 Aminotransferase class-III Tpau_1814 PF00474 Sodium:solute symporter family Tpau_1816 PF03466 LysR substrate binding domain Tpau_1816 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Tpau_1822 PF01593 Flavin containing amine oxidoreductase Tpau_1823 PF12697 Alpha/beta hydrolase family Tpau_1824 PF12697 Alpha/beta hydrolase family Tpau_1830 PF01370 NAD dependent epimerase/dehydratase family Tpau_1831 PF01325 Iron dependent repressor, N-terminal DNA binding domain Tpau_1831 PF02742 Iron dependent repressor, metal binding and dimerisation domain Tpau_1831 PF18357 Diphteria toxin repressor SH3 domain Tpau_1832 PF00850 Histone deacetylase domain Tpau_1833 PF08442 ATP-grasp domain Tpau_1833 PF00549 CoA-ligase Tpau_1834 PF04542 Sigma-70 region 2 Tpau_1834 PF04539 Sigma-70 region 3 Tpau_1834 PF00140 Sigma-70 factor, region 1.2 Tpau_1834 PF04545 Sigma-70, region 4 Tpau_1835 PF17827 PrmC N-terminal domain Tpau_1835 PF05175 Methyltransferase small domain Tpau_1839 PF04851 Type III restriction enzyme, res subunit Tpau_1842 PF00665 Integrase core domain Tpau_1842 PF13936 Helix-turn-helix domain Tpau_1845 PF05649 Peptidase family M13 Tpau_1845 PF01431 Peptidase family M13 Tpau_1846 PF05985 Ethanolamine ammonia-lyase light chain (EutC) Tpau_1847 PF06751 Ethanolamine ammonia lyase large subunit (EutB) Tpau_1848 PF13520 Amino acid permease Tpau_1855 PF08659 KR domain Tpau_1855 PF00550 Phosphopantetheine attachment site Tpau_1855 PF00109 Beta-ketoacyl synthase, N-terminal domain Tpau_1855 PF08990 Erythronolide synthase docking Tpau_1855 PF00698 Acyl transferase domain Tpau_1855 PF16197 Ketoacyl-synthetase C-terminal extension Tpau_1855 PF08240 Alcohol dehydrogenase GroES-like domain Tpau_1855 PF02801 Beta-ketoacyl synthase, C-terminal domain Tpau_1855 PF09277 Erythronolide synthase, docking Tpau_1855 PF14765 Polyketide synthase dehydratase Tpau_1856 PF13419 Haloacid dehalogenase-like hydrolase Tpau_1860 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Tpau_1860 PF02770 Acyl-CoA dehydrogenase, middle domain Tpau_1860 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Tpau_1861 PF02770 Acyl-CoA dehydrogenase, middle domain Tpau_1861 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Tpau_1861 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Tpau_1862 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Tpau_1862 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Tpau_1862 PF02770 Acyl-CoA dehydrogenase, middle domain Tpau_1863 PF02126 Phosphotriesterase family Tpau_1864 PF13193 AMP-binding enzyme C-terminal domain Tpau_1864 PF00501 AMP-binding enzyme Tpau_1865 PF07690 Major Facilitator Superfamily Tpau_1868 PF07929 Plasmid pRiA4b ORF-3-like protein Tpau_1870 PF01695 IstB-like ATP binding protein Tpau_1872 PF00289 Biotin carboxylase, N-terminal domain Tpau_1872 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Tpau_1872 PF02785 Biotin carboxylase C-terminal domain Tpau_1872 PF00364 Biotin-requiring enzyme Tpau_1874 PF00196 Bacterial regulatory proteins, luxR family Tpau_1874 PF00072 Response regulator receiver domain Tpau_1875 PF00672 HAMP domain Tpau_1875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tpau_1875 PF07730 Histidine kinase Tpau_1878 PF04539 Sigma-70 region 3 Tpau_1878 PF00140 Sigma-70 factor, region 1.2 Tpau_1878 PF04542 Sigma-70 region 2 Tpau_1878 PF04545 Sigma-70, region 4 Tpau_1879 PF00480 ROK family Tpau_1880 PF00459 Inositol monophosphatase family Tpau_1884 PF00692 dUTPase Tpau_1888 PF01938 TRAM domain Tpau_1888 PF05958 tRNA (Uracil-5-)-methyltransferase Tpau_1889 PF02779 Transketolase, pyrimidine binding domain Tpau_1889 PF02780 Transketolase, C-terminal domain Tpau_1889 PF13292 1-deoxy-D-xylulose-5-phosphate synthase Tpau_1892 PF01208 Uroporphyrinogen decarboxylase (URO-D) Tpau_1895 PF01641 SelR domain Tpau_1896 PF09594 Glycosyltransferase family 87 Tpau_1898 PF01872 RibD C-terminal domain Tpau_1898 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Tpau_1900 PF02583 Metal-sensitive transcriptional repressor Tpau_1901 PF00403 Heavy-metal-associated domain Tpau_1906 PF01039 Carboxyl transferase domain Tpau_1907 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain Tpau_1907 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Tpau_1908 PF02096 60Kd inner membrane protein Tpau_1910 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Tpau_1913 PF00535 Glycosyl transferase family 2 Tpau_1914 PF00440 Bacterial regulatory proteins, tetR family Tpau_1914 PF08359 YsiA-like protein, C-terminal region Tpau_1915 PF03033 Glycosyltransferase family 28 N-terminal domain Tpau_1919 PF03129 Anticodon binding domain Tpau_1919 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Tpau_1919 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Tpau_1920 PF01230 HIT domain Tpau_1922 PF03279 Bacterial lipid A biosynthesis acyltransferase Tpau_1923 PF13439 Glycosyltransferase Family 4 Tpau_1924 PF00293 NUDIX domain Tpau_1926 PF01680 SOR/SNZ family Tpau_1930 PF01174 SNO glutamine amidotransferase family Tpau_1931 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain Tpau_1931 PF06974 Protein of unknown function (DUF1298) Tpau_1932 PF01709 Transcriptional regulator Tpau_1934 PF02075 Crossover junction endodeoxyribonuclease RuvC Tpau_1935 PF01330 RuvA N terminal domain Tpau_1935 PF07499 RuvA, C-terminal domain Tpau_1936 PF17864 RuvB AAA lid domain Tpau_1936 PF05491 RuvB C-terminal winged helix domain Tpau_1936 PF05496 Holliday junction DNA helicase RuvB P-loop domain Tpau_1938 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase Tpau_1940 PF00271 Helicase conserved C-terminal domain Tpau_1940 PF00570 HRDC domain Tpau_1940 PF00270 DEAD/DEAH box helicase Tpau_1940 PF16124 RecQ zinc-binding Tpau_1940 PF09382 RQC domain Tpau_1941 PF02699 Preprotein translocase subunit Tpau_1942 PF07549 SecD/SecF GG Motif Tpau_1942 PF02355 Protein export membrane protein Tpau_1943 PF07549 SecD/SecF GG Motif Tpau_1943 PF02355 Protein export membrane protein Tpau_1944 PF00156 Phosphoribosyl transferase domain Tpau_1945 PF02824 TGS domain Tpau_1945 PF13291 ACT domain Tpau_1945 PF04607 Region found in RelA / SpoT proteins Tpau_1947 PF00665 Integrase core domain Tpau_1947 PF13936 Helix-turn-helix domain Tpau_1948 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Tpau_1949 PF00753 Metallo-beta-lactamase superfamily Tpau_1950 PF13393 Histidyl-tRNA synthetase Tpau_1950 PF03129 Anticodon binding domain Tpau_1952 PF04055 Radical SAM superfamily Tpau_1953 PF01022 Bacterial regulatory protein, arsR family Tpau_1955 PF02492 CobW/HypB/UreG, nucleotide-binding domain Tpau_1955 PF07683 Cobalamin synthesis protein cobW C-terminal domain Tpau_1956 PF16901 C-terminal domain of alpha-glycerophosphate oxidase Tpau_1956 PF01266 FAD dependent oxidoreductase Tpau_1957 PF00440 Bacterial regulatory proteins, tetR family Tpau_1962 PF04228 Putative neutral zinc metallopeptidase Tpau_1963 PF00152 tRNA synthetases class II (D, K and N) Tpau_1963 PF01336 OB-fold nucleic acid binding domain Tpau_1963 PF02938 GAD domain Tpau_1965 PF04168 A predicted alpha-helical domain with a conserved ER motif. Tpau_1965 PF14403 Circularly permuted ATP-grasp type 2 Tpau_1966 PF08379 Bacterial transglutaminase-like N-terminal region Tpau_1966 PF01841 Transglutaminase-like superfamily Tpau_1967 PF00005 ABC transporter Tpau_1967 PF09383 NIL domain Tpau_1968 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Tpau_1968 PF00005 ABC transporter Tpau_1969 PF00528 Binding-protein-dependent transport system inner membrane component Tpau_1969 PF12911 N-terminal TM domain of oligopeptide transport permease C Tpau_1970 PF00528 Binding-protein-dependent transport system inner membrane component Tpau_1971 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Tpau_1974 PF00004 ATPase family associated with various cellular activities (AAA) Tpau_1974 PF16193 AAA C-terminal domain Tpau_1974 PF12002 MgsA AAA+ ATPase C terminal Tpau_1975 PF02272 DHHA1 domain Tpau_1975 PF01411 tRNA synthetases class II (A) Tpau_1975 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Tpau_1976 PF03652 Holliday junction resolvase Tpau_1977 PF02618 YceG-like family Tpau_1978 PF08501 Shikimate dehydrogenase substrate binding domain Tpau_1978 PF01488 Shikimate / quinate 5-dehydrogenase Tpau_1978 PF18317 Shikimate 5'-dehydrogenase C-terminal domain Tpau_1982 PF00296 Luciferase-like monooxygenase Tpau_1984 PF00501 AMP-binding enzyme Tpau_1984 PF13193 AMP-binding enzyme C-terminal domain Tpau_1988 PF00528 Binding-protein-dependent transport system inner membrane component Tpau_1989 PF00072 Response regulator receiver domain Tpau_1989 PF00196 Bacterial regulatory proteins, luxR family Tpau_1990 PF07730 Histidine kinase Tpau_1991 PF00291 Pyridoxal-phosphate dependent enzyme Tpau_1991 PF00585 C-terminal regulatory domain of Threonine dehydratase Tpau_1994 PF00296 Luciferase-like monooxygenase Tpau_1995 PF00296 Luciferase-like monooxygenase Tpau_1998 PF00202 Aminotransferase class-III Tpau_1999 PF00155 Aminotransferase class I and II Tpau_2001 PF01569 PAP2 superfamily Tpau_2002 PF06968 Biotin and Thiamin Synthesis associated domain Tpau_2002 PF04055 Radical SAM superfamily Tpau_2005 PF03358 NADPH-dependent FMN reductase Tpau_2006 PF00296 Luciferase-like monooxygenase Tpau_2007 PF01734 Patatin-like phospholipase Tpau_2010 PF02445 Quinolinate synthetase A protein Tpau_2011 PF02910 Fumarate reductase flavoprotein C-term Tpau_2011 PF00890 FAD binding domain Tpau_2012 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain Tpau_2012 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain Tpau_2015 PF00486 Transcriptional regulatory protein, C terminal Tpau_2015 PF00072 Response regulator receiver domain Tpau_2016 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tpau_2016 PF00672 HAMP domain Tpau_2016 PF18698 Histidine kinase sensor domain Tpau_2016 PF00512 His Kinase A (phospho-acceptor) domain Tpau_2016 PF00989 PAS fold Tpau_2018 PF00107 Zinc-binding dehydrogenase Tpau_2018 PF08240 Alcohol dehydrogenase GroES-like domain Tpau_2023 PF00815 Histidinol dehydrogenase Tpau_2024 PF00155 Aminotransferase class I and II Tpau_2025 PF00475 Imidazoleglycerol-phosphate dehydratase Tpau_2026 PF01979 Amidohydrolase family Tpau_2027 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin Tpau_2028 PF01177 Asp/Glu/Hydantoin racemase Tpau_2030 PF07883 Cupin domain Tpau_2030 PF05899 Protein of unknown function (DUF861) Tpau_2032 PF01614 Bacterial transcriptional regulator Tpau_2032 PF09339 IclR helix-turn-helix domain Tpau_2034 PF00378 Enoyl-CoA hydratase/isomerase Tpau_2035 PF13607 Succinyl-CoA ligase like flavodoxin domain Tpau_2035 PF13380 CoA binding domain Tpau_2035 PF00583 Acetyltransferase (GNAT) family Tpau_2036 PF00378 Enoyl-CoA hydratase/isomerase Tpau_2037 PF00117 Glutamine amidotransferase class-I Tpau_2039 PF00977 Histidine biosynthesis protein Tpau_2040 PF00459 Inositol monophosphatase family Tpau_2041 PF00977 Histidine biosynthesis protein Tpau_2042 PF01502 Phosphoribosyl-AMP cyclohydrolase Tpau_2043 PF00578 AhpC/TSA family Tpau_2044 PF00425 chorismate binding enzyme Tpau_2044 PF04715 Anthranilate synthase component I, N terminal region Tpau_2046 PF00218 Indole-3-glycerol phosphate synthase Tpau_2047 PF01869 BadF/BadG/BcrA/BcrD ATPase family Tpau_2048 PF00083 Sugar (and other) transporter Tpau_2049 PF00392 Bacterial regulatory proteins, gntR family Tpau_2049 PF07702 UTRA domain Tpau_2052 PF00528 Binding-protein-dependent transport system inner membrane component Tpau_2054 PF00291 Pyridoxal-phosphate dependent enzyme Tpau_2055 PF00290 Tryptophan synthase alpha chain Tpau_2056 PF00563 EAL domain Tpau_2056 PF00990 Diguanylate cyclase, GGDEF domain Tpau_2056 PF08447 PAS fold Tpau_2056 PF13426 PAS domain Tpau_2056 PF08448 PAS fold Tpau_2056 PF05231 MASE1 Tpau_2057 PF00563 EAL domain Tpau_2057 PF13426 PAS domain Tpau_2057 PF00990 Diguanylate cyclase, GGDEF domain Tpau_2058 PF00990 Diguanylate cyclase, GGDEF domain Tpau_2058 PF13185 GAF domain Tpau_2058 PF00563 EAL domain Tpau_2059 PF00005 ABC transporter Tpau_2059 PF12848 ABC transporter Tpau_2060 PF00106 short chain dehydrogenase Tpau_2063 PF02585 GlcNAc-PI de-N-acetylase Tpau_2067 PF03009 Glycerophosphoryl diester phosphodiesterase family Tpau_2070 PF01547 Bacterial extracellular solute-binding protein Tpau_2071 PF00528 Binding-protein-dependent transport system inner membrane component Tpau_2072 PF08402 TOBE domain Tpau_2072 PF00005 ABC transporter Tpau_2074 PF00440 Bacterial regulatory proteins, tetR family Tpau_2075 PF00694 Aconitase C-terminal domain Tpau_2075 PF00330 Aconitase family (aconitate hydratase) Tpau_2077 PF00877 NlpC/P60 family Tpau_2078 PF17863 AAA lid domain Tpau_2078 PF07726 ATPase family associated with various cellular activities (AAA) Tpau_2079 PF01882 Protein of unknown function DUF58 Tpau_2080 PF07584 Aerotolerance regulator N-terminal Tpau_2080 PF13519 von Willebrand factor type A domain Tpau_2089 PF16170 Domain of unknown function (DUF4873) Tpau_2091 PF01145 SPFH domain / Band 7 family Tpau_2095 PF03466 LysR substrate binding domain Tpau_2095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Tpau_2096 PF00528 Binding-protein-dependent transport system inner membrane component Tpau_2097 PF00528 Binding-protein-dependent transport system inner membrane component Tpau_2098 PF08402 TOBE domain Tpau_2098 PF00005 ABC transporter Tpau_2099 PF01547 Bacterial extracellular solute-binding protein Tpau_2100 PF00890 FAD binding domain Tpau_2102 PF13419 Haloacid dehalogenase-like hydrolase Tpau_2103 PF09335 SNARE associated Golgi protein Tpau_2104 PF01642 Methylmalonyl-CoA mutase Tpau_2105 PF01642 Methylmalonyl-CoA mutase Tpau_2105 PF02310 B12 binding domain Tpau_2109 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Tpau_2109 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal Tpau_2112 PF08447 PAS fold Tpau_2112 PF00990 Diguanylate cyclase, GGDEF domain Tpau_2112 PF00563 EAL domain Tpau_2112 PF08448 PAS fold Tpau_2113 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Tpau_2113 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Tpau_2114 PF13520 Amino acid permease Tpau_2116 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Tpau_2116 PF02770 Acyl-CoA dehydrogenase, middle domain Tpau_2116 PF08028 Acyl-CoA dehydrogenase, C-terminal domain Tpau_2118 PF13193 AMP-binding enzyme C-terminal domain Tpau_2118 PF00501 AMP-binding enzyme Tpau_2122 PF01156 Inosine-uridine preferring nucleoside hydrolase Tpau_2123 PF00106 short chain dehydrogenase Tpau_2125 PF13810 Domain of unknown function (DUF4185) Tpau_2128 PF01546 Peptidase family M20/M25/M40 Tpau_2128 PF07687 Peptidase dimerisation domain Tpau_2129 PF01161 Phosphatidylethanolamine-binding protein Tpau_2130 PF01180 Dihydroorotate dehydrogenase Tpau_2133 PF02673 Bacitracin resistance protein BacA Tpau_2134 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Tpau_2134 PF03466 LysR substrate binding domain Tpau_2135 PF00701 Dihydrodipicolinate synthetase family Tpau_2140 PF01406 tRNA synthetases class I (C) catalytic domain Tpau_2144 PF00809 Pterin binding enzyme Tpau_2144 PF02607 B12 binding domain Tpau_2144 PF02310 B12 binding domain Tpau_2144 PF02574 Homocysteine S-methyltransferase Tpau_2144 PF02965 Vitamin B12 dependent methionine synthase, activation domain Tpau_2145 PF00149 Calcineurin-like phosphoesterase Tpau_2145 PF17936 Bacterial Ig domain Tpau_2145 PF02872 5'-nucleotidase, C-terminal domain Tpau_2146 PF13419 Haloacid dehalogenase-like hydrolase Tpau_2149 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase Tpau_2150 PF01634 ATP phosphoribosyltransferase Tpau_2150 PF08029 HisG, C-terminal domain Tpau_2152 PF08704 tRNA methyltransferase complex GCD14 subunit Tpau_2153 PF17758 Proteasomal ATPase OB N-terminal domain Tpau_2153 PF00004 ATPase family associated with various cellular activities (AAA) Tpau_2153 PF16450 Proteasomal ATPase OB C-terminal domain Tpau_2154 PF00005 ABC transporter Tpau_2154 PF01061 ABC-2 type transporter Tpau_2154 PF00498 FHA domain Tpau_2155 PF03136 Pup-ligase protein Tpau_2156 PF04075 F420H(2)-dependent quinone reductase Tpau_2158 PF05639 Pup-like protein Tpau_2159 PF00227 Proteasome subunit Tpau_2160 PF00227 Proteasome subunit Tpau_2162 PF00209 Sodium:neurotransmitter symporter family Tpau_2165 PF00440 Bacterial regulatory proteins, tetR family Tpau_2166 PF03136 Pup-ligase protein Tpau_2167 PF13280 WYL domain Tpau_2168 PF13280 WYL domain Tpau_2169 PF02416 mttA/Hcf106 family Tpau_2170 PF00902 Sec-independent protein translocase protein (TatC) Tpau_2171 PF00271 Helicase conserved C-terminal domain Tpau_2171 PF08148 DSHCT (NUC185) domain Tpau_2171 PF00270 DEAD/DEAH box helicase Tpau_2173 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain Tpau_2173 PF01367 5'-3' exonuclease, C-terminal SAM fold Tpau_2174 PF00557 Metallopeptidase family M24 Tpau_2174 PF01321 Creatinase/Prolidase N-terminal domain Tpau_2175 PF00083 Sugar (and other) transporter Tpau_2176 PF01243 Pyridoxamine 5'-phosphate oxidase Tpau_2177 PF00106 short chain dehydrogenase Tpau_2178 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Tpau_2179 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Tpau_2180 PF02571 Precorrin-6x reductase CbiJ/CobK Tpau_2182 PF13411 MerR HTH family regulatory protein Tpau_2183 PF12697 Alpha/beta hydrolase family Tpau_2186 PF07690 Major Facilitator Superfamily Tpau_2187 PF07859 alpha/beta hydrolase fold Tpau_2188 PF01381 Helix-turn-helix Tpau_2190 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Tpau_2191 PF02570 Precorrin-8X methylmutase Tpau_2192 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain Tpau_2193 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Tpau_2193 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal Tpau_2196 PF02514 CobN/Magnesium Chelatase Tpau_2198 PF01979 Amidohydrolase family Tpau_2199 PF00535 Glycosyl transferase family 2 Tpau_2199 PF00795 Carbon-nitrogen hydrolase Tpau_2200 PF00535 Glycosyl transferase family 2 Tpau_2201 PF13397 RNA polymerase-binding protein Tpau_2205 PF17964 Bacterial Ig domain Tpau_2205 PF03734 L,D-transpeptidase catalytic domain Tpau_2206 PF00743 Flavin-binding monooxygenase-like Tpau_2209 PF00132 Bacterial transferase hexapeptide (six repeats) Tpau_2211 PF00465 Iron-containing alcohol dehydrogenase Tpau_2216 PF00392 Bacterial regulatory proteins, gntR family Tpau_2216 PF07729 FCD domain Tpau_2217 PF07690 Major Facilitator Superfamily Tpau_2219 PF17760 UvrA interaction domain Tpau_2219 PF17755 UvrA DNA-binding domain Tpau_2219 PF00005 ABC transporter Tpau_2225 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Tpau_2225 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Tpau_2227 PF00067 Cytochrome P450 Tpau_2228 PF02515 CoA-transferase family III Tpau_2231 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal Tpau_2231 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Tpau_2232 PF01451 Low molecular weight phosphotyrosine protein phosphatase Tpau_2233 PF01758 Sodium Bile acid symporter family Tpau_2234 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Tpau_2249 PF02405 Permease MlaE Tpau_2250 PF02405 Permease MlaE Tpau_2253 PF00553 Cellulose binding domain Tpau_2253 PF00331 Glycosyl hydrolase family 10 Tpau_2255 PF07690 Major Facilitator Superfamily Tpau_2257 PF00106 short chain dehydrogenase Tpau_2258 PF00440 Bacterial regulatory proteins, tetR family Tpau_2259 PF01593 Flavin containing amine oxidoreductase Tpau_2261 PF03971 Monomeric isocitrate dehydrogenase Tpau_2262 PF05661 Protein of unknown function (DUF808) Tpau_2265 PF00144 Beta-lactamase Tpau_2267 PF00141 Peroxidase Tpau_2270 PF13847 Methyltransferase domain Tpau_2271 PF02397 Bacterial sugar transferase Tpau_2274 PF13520 Amino acid permease Tpau_2276 PF08240 Alcohol dehydrogenase GroES-like domain Tpau_2276 PF00107 Zinc-binding dehydrogenase Tpau_2282 PF01070 FMN-dependent dehydrogenase Tpau_2284 PF00258 Flavodoxin Tpau_2287 PF01145 SPFH domain / Band 7 family Tpau_2287 PF15975 Flotillin Tpau_2290 PF00440 Bacterial regulatory proteins, tetR family Tpau_2290 PF08359 YsiA-like protein, C-terminal region Tpau_2291 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase Tpau_2291 PF03033 Glycosyltransferase family 28 N-terminal domain Tpau_2292 PF00137 ATP synthase subunit C Tpau_2293 PF01844 HNH endonuclease Tpau_2293 PF02720 Domain of unknown function (DUF222) Tpau_2294 PF13538 UvrD-like helicase C-terminal domain Tpau_2295 PF00580 UvrD/REP helicase N-terminal domain Tpau_2295 PF13361 UvrD-like helicase C-terminal domain Tpau_2295 PF12705 PD-(D/E)XK nuclease superfamily Tpau_2296 PF17946 RecC C-terminal domain Tpau_2298 PF10604 Polyketide cyclase / dehydrase and lipid transport Tpau_2300 PF09348 Domain of unknown function (DUF1990) Tpau_2303 PF00528 Binding-protein-dependent transport system inner membrane component Tpau_2304 PF00005 ABC transporter Tpau_2304 PF03459 TOBE domain Tpau_2305 PF03551 Transcriptional regulator PadR-like family Tpau_2311 PF03061 Thioesterase superfamily Tpau_2313 PF03965 Penicillinase repressor Tpau_2316 PF00478 IMP dehydrogenase / GMP reductase domain Tpau_2316 PF00571 CBS domain Tpau_2317 PF01595 Cyclin M transmembrane N-terminal domain Tpau_2317 PF00571 CBS domain Tpau_2317 PF03471 Transporter associated domain Tpau_2318 PF00571 CBS domain Tpau_2318 PF01595 Cyclin M transmembrane N-terminal domain Tpau_2320 PF01551 Peptidase family M23 Tpau_2321 PF01032 FecCD transport family Tpau_2322 PF00005 ABC transporter Tpau_2324 PF07161 LppX_LprAFG lipoprotein Tpau_2326 PF00195 Chalcone and stilbene synthases, N-terminal domain Tpau_2326 PF02797 Chalcone and stilbene synthases, C-terminal domain Tpau_2327 PF00005 ABC transporter Tpau_2327 PF00664 ABC transporter transmembrane region Tpau_2328 PF01274 Malate synthase Tpau_2334 PF02347 Glycine cleavage system P-protein Tpau_2335 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase Tpau_2336 PF13411 MerR HTH family regulatory protein Tpau_2337 PF02577 Bifunctional nuclease Tpau_2338 PF00376 MerR family regulatory protein Tpau_2339 PF00498 FHA domain Tpau_2340 PF01597 Glycine cleavage H-protein Tpau_2342 PF01043 SecA preprotein cross-linking domain Tpau_2342 PF07517 SecA DEAD-like domain Tpau_2342 PF07516 SecA Wing and Scaffold domain Tpau_2343 PF02225 PA domain Tpau_2343 PF04389 Peptidase family M28 Tpau_2345 PF00384 Molybdopterin oxidoreductase Tpau_2345 PF01568 Molydopterin dinucleotide binding domain Tpau_2346 PF02634 FdhD/NarQ family Tpau_2347 PF03454 MoeA C-terminal region (domain IV) Tpau_2347 PF03453 MoeA N-terminal region (domain I and II) Tpau_2347 PF00994 Probable molybdopterin binding domain Tpau_2348 PF12804 MobA-like NTP transferase domain Tpau_2349 PF00561 alpha/beta hydrolase fold Tpau_2353 PF02525 Flavodoxin-like fold Tpau_2354 PF00440 Bacterial regulatory proteins, tetR family Tpau_2354 PF17926 Tetracyclin repressor-like, C-terminal domain Tpau_2355 PF00106 short chain dehydrogenase Tpau_2356 PF03928 Haem-degrading Tpau_2362 PF13350 Tyrosine phosphatase family Tpau_2366 PF08021 Siderophore-interacting FAD-binding domain Tpau_2366 PF04954 Siderophore-interacting protein Tpau_2369 PF01926 50S ribosome-binding GTPase Tpau_2369 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal Tpau_2370 PF02224 Cytidylate kinase Tpau_2371 PF00849 RNA pseudouridylate synthase Tpau_2371 PF01479 S4 domain Tpau_2372 PF04079 Segregation and condensation complex subunit ScpB Tpau_2373 PF02616 Segregation and condensation protein ScpA Tpau_2374 PF13614 AAA domain Tpau_2375 PF00589 Phage integrase family Tpau_2375 PF02899 Phage integrase, N-terminal SAM-like domain Tpau_2376 PF00293 NUDIX domain Tpau_2377 PF06418 CTP synthase N-terminus Tpau_2377 PF00117 Glutamine amidotransferase class-I Tpau_2378 PF11382 Copper transport outer membrane protein, MctB Tpau_2381 PF02463 RecF/RecN/SMC N terminal domain Tpau_2382 PF01513 ATP-NAD kinase Tpau_2383 PF01728 FtsJ-like methyltransferase Tpau_2383 PF01479 S4 domain Tpau_2385 PF13344 Haloacid dehalogenase-like hydrolase Tpau_2385 PF18407 GCN5-related N-acetyltransferase like domain Tpau_2388 PF00579 tRNA synthetases class I (W and Y) Tpau_2389 PF02245 Methylpurine-DNA glycosylase (MPG) Tpau_2390 PF03966 Trm112p-like protein Tpau_2391 PF00107 Zinc-binding dehydrogenase Tpau_2391 PF08240 Alcohol dehydrogenase GroES-like domain Tpau_2393 PF00005 ABC transporter Tpau_2395 PF17932 Tetracyclin repressor-like, C-terminal domain Tpau_2395 PF00440 Bacterial regulatory proteins, tetR family Tpau_2396 PF14698 Argininosuccinate lyase C-terminal Tpau_2396 PF00206 Lyase Tpau_2397 PF00764 Arginosuccinate synthase Tpau_2398 PF02863 Arginine repressor, C-terminal domain Tpau_2398 PF01316 Arginine repressor, DNA binding domain Tpau_2399 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Tpau_2399 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Tpau_2400 PF00202 Aminotransferase class-III Tpau_2401 PF00696 Amino acid kinase family Tpau_2402 PF01960 ArgJ family Tpau_2403 PF02774 Semialdehyde dehydrogenase, dimerisation domain Tpau_2403 PF01118 Semialdehyde dehydrogenase, NAD binding domain Tpau_2407 PF00743 Flavin-binding monooxygenase-like Tpau_2408 PF01588 Putative tRNA binding domain Tpau_2408 PF03483 B3/4 domain Tpau_2408 PF03484 tRNA synthetase B5 domain Tpau_2408 PF03147 Ferredoxin-fold anticodon binding domain Tpau_2408 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain Tpau_2409 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain Tpau_2409 PF01409 tRNA synthetases class II core domain (F) Tpau_2410 PF00893 Small Multidrug Resistance protein Tpau_2414 PF00196 Bacterial regulatory proteins, luxR family Tpau_2414 PF00072 Response regulator receiver domain Tpau_2415 PF00588 SpoU rRNA Methylase family Tpau_2416 PF00453 Ribosomal protein L20 Tpau_2417 PF01632 Ribosomal protein L35 Tpau_2418 PF00707 Translation initiation factor IF-3, C-terminal domain Tpau_2418 PF05198 Translation initiation factor IF-3, N-terminal domain Tpau_2422 PF17760 UvrA interaction domain Tpau_2422 PF17755 UvrA DNA-binding domain Tpau_2422 PF00005 ABC transporter Tpau_2423 PF00753 Metallo-beta-lactamase superfamily Tpau_2424 PF01494 FAD binding domain Tpau_2425 PF13538 UvrD-like helicase C-terminal domain Tpau_2426 PF00582 Universal stress protein family Tpau_2427 PF17757 UvrB interaction domain Tpau_2427 PF00271 Helicase conserved C-terminal domain Tpau_2427 PF04851 Type III restriction enzyme, res subunit Tpau_2427 PF02151 UvrB/uvrC motif Tpau_2427 PF12344 Ultra-violet resistance protein B Tpau_2433 PF01121 Dephospho-CoA kinase Tpau_2433 PF04229 GrpB protein Tpau_2435 PF00575 S1 RNA binding domain Tpau_2436 PF08241 Methyltransferase domain Tpau_2444 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) Tpau_2445 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain Tpau_2445 PF00476 DNA polymerase family A Tpau_2445 PF01367 5'-3' exonuclease, C-terminal SAM fold Tpau_2448 PF13421 SPFH domain-Band 7 family Tpau_2449 PF07411 Domain of unknown function (DUF1508) Tpau_2451 PF00376 MerR family regulatory protein Tpau_2451 PF09278 MerR, DNA binding Tpau_2452 PF05506 Domain of unknown function (DUF756) Tpau_2452 PF04185 Phosphoesterase family Tpau_2454 PF07690 Major Facilitator Superfamily Tpau_2456 PF04075 F420H(2)-dependent quinone reductase Tpau_2457 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase Tpau_2458 PF13411 MerR HTH family regulatory protein Tpau_2459 PF00724 NADH:flavin oxidoreductase / NADH oxidase family Tpau_2460 PF13409 Glutathione S-transferase, N-terminal domain Tpau_2468 PF02801 Beta-ketoacyl synthase, C-terminal domain Tpau_2468 PF00109 Beta-ketoacyl synthase, N-terminal domain Tpau_2470 PF02720 Domain of unknown function (DUF222) Tpau_2471 PF00872 Transposase, Mutator family Tpau_2473 PF13276 HTH-like domain Tpau_2473 PF00665 Integrase core domain Tpau_2475 PF00561 alpha/beta hydrolase fold Tpau_2482 PF00561 alpha/beta hydrolase fold Tpau_2483 PF03861 ANTAR domain Tpau_2483 PF00072 Response regulator receiver domain Tpau_2486 PF01694 Rhomboid family Tpau_2487 PF00005 ABC transporter Tpau_2489 PF02551 Acyl-CoA thioesterase Tpau_2490 PF00224 Pyruvate kinase, barrel domain Tpau_2490 PF02887 Pyruvate kinase, alpha/beta domain Tpau_2491 PF01790 Prolipoprotein diacylglyceryl transferase Tpau_2494 PF00196 Bacterial regulatory proteins, luxR family Tpau_2494 PF00072 Response regulator receiver domain Tpau_2496 PF00085 Thioredoxin Tpau_2499 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Tpau_2499 PF02770 Acyl-CoA dehydrogenase, middle domain Tpau_2499 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Tpau_2501 PF01047 MarR family Tpau_2502 PF01965 DJ-1/PfpI family Tpau_2502 PF12833 Helix-turn-helix domain Tpau_2503 PF01965 DJ-1/PfpI family Tpau_2504 PF01883 Iron-sulfur cluster assembly protein Tpau_2505 PF01592 NifU-like N terminal domain Tpau_2506 PF00266 Aminotransferase class-V Tpau_2507 PF00005 ABC transporter Tpau_2508 PF01458 Uncharacterized protein family (UPF0051) Tpau_2509 PF01458 Uncharacterized protein family (UPF0051) Tpau_2512 PF00005 ABC transporter Tpau_2517 PF08240 Alcohol dehydrogenase GroES-like domain Tpau_2517 PF00107 Zinc-binding dehydrogenase Tpau_2518 PF00440 Bacterial regulatory proteins, tetR family Tpau_2521 PF01040 UbiA prenyltransferase family Tpau_2522 PF02779 Transketolase, pyrimidine binding domain Tpau_2522 PF00456 Transketolase, thiamine diphosphate binding domain Tpau_2522 PF02780 Transketolase, C-terminal domain Tpau_2523 PF00923 Transaldolase/Fructose-6-phosphate aldolase Tpau_2524 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain Tpau_2524 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain Tpau_2526 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase Tpau_2533 PF02770 Acyl-CoA dehydrogenase, middle domain Tpau_2533 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Tpau_2533 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Tpau_2534 PF14032 PknH-like extracellular domain Tpau_2534 PF00069 Protein kinase domain Tpau_2535 PF07858 Limonene-1,2-epoxide hydrolase catalytic domain Tpau_2536 PF00311 Phosphoenolpyruvate carboxylase Tpau_2537 PF03840 Preprotein translocase SecG subunit Tpau_2538 PF00121 Triosephosphate isomerase Tpau_2539 PF00162 Phosphoglycerate kinase Tpau_2540 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Tpau_2540 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Tpau_2542 PF10298 WhiA N-terminal LAGLIDADG-like domain Tpau_2542 PF14527 WhiA LAGLIDADG-like domain Tpau_2542 PF02650 WhiA C-terminal HTH domain Tpau_2543 PF01933 Uncharacterised protein family UPF0052 Tpau_2544 PF03668 P-loop ATPase protein family Tpau_2550 PF01541 GIY-YIG catalytic domain Tpau_2550 PF12826 Helix-hairpin-helix motif Tpau_2550 PF02151 UvrB/uvrC motif Tpau_2550 PF08459 UvrC Helix-hairpin-helix N-terminal Tpau_2552 PF00501 AMP-binding enzyme Tpau_2552 PF13193 AMP-binding enzyme C-terminal domain Tpau_2556 PF00854 POT family Tpau_2557 PF05199 GMC oxidoreductase Tpau_2557 PF00732 GMC oxidoreductase Tpau_2558 PF00171 Aldehyde dehydrogenase family Tpau_2559 PF10756 Bacterial PH domain Tpau_2560 PF00885 6,7-dimethyl-8-ribityllumazine synthase Tpau_2561 PF00925 GTP cyclohydrolase II Tpau_2561 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase Tpau_2562 PF00677 Lumazine binding domain Tpau_2563 PF01872 RibD C-terminal domain Tpau_2563 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Tpau_2564 PF00834 Ribulose-phosphate 3 epimerase family Tpau_2566 PF01029 NusB family Tpau_2566 PF01189 16S rRNA methyltransferase RsmB/F Tpau_2567 PF02911 Formyl transferase, C-terminal domain Tpau_2567 PF00551 Formyl transferase Tpau_2568 PF01327 Polypeptide deformylase Tpau_2570 PF04734 Neutral/alkaline non-lysosomal ceramidase, N-terminal Tpau_2570 PF17048 Neutral/alkaline non-lysosomal ceramidase, C-terminal Tpau_2572 PF08361 MAATS-type transcriptional repressor, C-terminal region Tpau_2572 PF00440 Bacterial regulatory proteins, tetR family Tpau_2573 PF06965 Na+/H+ antiporter 1 Tpau_2574 PF17764 3′ DNA-binding domain (3′BD) Tpau_2575 PF00438 S-adenosylmethionine synthetase, N-terminal domain Tpau_2575 PF02773 S-adenosylmethionine synthetase, C-terminal domain Tpau_2575 PF02772 S-adenosylmethionine synthetase, central domain Tpau_2576 PF02441 Flavoprotein Tpau_2576 PF04127 DNA / pantothenate metabolism flavoprotein Tpau_2577 PF01192 RNA polymerase Rpb6 Tpau_2578 PF00625 Guanylate kinase Tpau_2580 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family Tpau_2581 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Tpau_2581 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain Tpau_2581 PF02142 MGS-like domain Tpau_2582 PF00117 Glutamine amidotransferase class-I Tpau_2582 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain Tpau_2584 PF01979 Amidohydrolase family Tpau_2585 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Tpau_2585 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Tpau_2586 PF00156 Phosphoribosyl transferase domain Tpau_2587 PF05199 GMC oxidoreductase Tpau_2587 PF00732 GMC oxidoreductase Tpau_2588 PF01758 Sodium Bile acid symporter family Tpau_2589 PF01029 NusB family Tpau_2590 PF08207 Elongation factor P (EF-P) KOW-like domain Tpau_2590 PF01132 Elongation factor P (EF-P) OB domain Tpau_2590 PF09285 Elongation factor P, C-terminal Tpau_2591 PF01321 Creatinase/Prolidase N-terminal domain Tpau_2591 PF00557 Metallopeptidase family M24 Tpau_2594 PF06745 KaiC Tpau_2594 PF18073 Rubredoxin metal binding domain Tpau_2596 PF00440 Bacterial regulatory proteins, tetR family Tpau_2596 PF13305 Tetracyclin repressor-like, C-terminal domain Tpau_2606 PF13276 HTH-like domain Tpau_2606 PF00665 Integrase core domain Tpau_2610 PF00534 Glycosyl transferases group 1 Tpau_2610 PF13439 Glycosyltransferase Family 4 Tpau_2612 PF13579 Glycosyl transferase 4-like domain Tpau_2612 PF00534 Glycosyl transferases group 1 Tpau_2613 PF01370 NAD dependent epimerase/dehydratase family Tpau_2614 PF16363 GDP-mannose 4,6 dehydratase Tpau_2615 PF02397 Bacterial sugar transferase Tpau_2616 PF01761 3-dehydroquinate synthase Tpau_2617 PF01202 Shikimate kinase Tpau_2618 PF01264 Chorismate synthase Tpau_2620 PF02811 PHP domain Tpau_2620 PF14579 Helix-hairpin-helix motif Tpau_2620 PF07733 Bacterial DNA polymerase III alpha NTPase domain Tpau_2620 PF17657 Bacterial DNA polymerase III alpha subunit finger domain Tpau_2621 PF14032 PknH-like extracellular domain Tpau_2621 PF00069 Protein kinase domain Tpau_2622 PF00664 ABC transporter transmembrane region Tpau_2622 PF00005 ABC transporter Tpau_2624 PF00440 Bacterial regulatory proteins, tetR family Tpau_2627 PF00849 RNA pseudouridylate synthase Tpau_2628 PF01252 Signal peptidase (SPase) II Tpau_2631 PF00710 Asparaginase, N-terminal Tpau_2631 PF17763 Glutaminase/Asparaginase C-terminal domain Tpau_2635 PF11799 impB/mucB/samB family C-terminal domain Tpau_2635 PF00817 impB/mucB/samB family Tpau_2635 PF11798 IMS family HHH motif Tpau_2636 PF08264 Anticodon-binding domain of tRNA Tpau_2636 PF00133 tRNA synthetases class I (I, L, M and V) Tpau_2638 PF05103 DivIVA protein Tpau_2640 PF04472 Cell division protein SepF Tpau_2641 PF01168 Alanine racemase, N-terminal domain Tpau_2643 PF00091 Tubulin/FtsZ family, GTPase domain Tpau_2643 PF12327 FtsZ family, C-terminal domain Tpau_2644 PF03799 Cell division protein FtsQ Tpau_2644 PF08478 POTRA domain, FtsQ-type Tpau_2645 PF01225 Mur ligase family, catalytic domain Tpau_2645 PF02875 Mur ligase family, glutamate ligase domain Tpau_2645 PF08245 Mur ligase middle domain Tpau_2646 PF03033 Glycosyltransferase family 28 N-terminal domain Tpau_2646 PF04101 Glycosyltransferase family 28 C-terminal domain Tpau_2647 PF01098 Cell cycle protein Tpau_2648 PF08245 Mur ligase middle domain Tpau_2648 PF02875 Mur ligase family, glutamate ligase domain Tpau_2649 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 Tpau_2649 PF00953 Glycosyl transferase family 4 Tpau_2650 PF08245 Mur ligase middle domain Tpau_2650 PF02875 Mur ligase family, glutamate ligase domain Tpau_2650 PF01225 Mur ligase family, catalytic domain Tpau_2651 PF08245 Mur ligase middle domain Tpau_2651 PF01225 Mur ligase family, catalytic domain Tpau_2651 PF02875 Mur ligase family, glutamate ligase domain Tpau_2652 PF00905 Penicillin binding protein transpeptidase domain Tpau_2652 PF03717 Penicillin-binding Protein dimerisation domain Tpau_2654 PF01795 MraW methylase family Tpau_2655 PF02381 MraZ protein, putative antitoxin-like Tpau_2661 PF02219 Methylenetetrahydrofolate reductase Tpau_2662 PF00348 Polyprenyl synthetase Tpau_2663 PF01497 Periplasmic binding protein Tpau_2664 PF01032 FecCD transport family Tpau_2665 PF01032 FecCD transport family Tpau_2666 PF00005 ABC transporter Tpau_2668 PF18367 Rv2175c C-terminal domain of unknown function Tpau_2669 PF00069 Protein kinase domain Tpau_2670 PF04607 Region found in RelA / SpoT proteins Tpau_2671 PF13193 AMP-binding enzyme C-terminal domain Tpau_2671 PF16177 Acetyl-coenzyme A synthetase N-terminus Tpau_2671 PF00501 AMP-binding enzyme Tpau_2672 PF01474 Class-II DAHP synthetase family Tpau_2673 PF16473 3' exoribonuclease, RNase T-like Tpau_2674 PF01553 Acyltransferase Tpau_2675 PF00480 ROK family Tpau_2680 PF00501 AMP-binding enzyme Tpau_2681 PF13439 Glycosyltransferase Family 4 Tpau_2681 PF00534 Glycosyl transferases group 1 Tpau_2683 PF00877 NlpC/P60 family Tpau_2686 PF00929 Exonuclease Tpau_2686 PF01541 GIY-YIG catalytic domain Tpau_2688 PF03328 HpcH/HpaI aldolase/citrate lyase family Tpau_2689 PF03129 Anticodon binding domain Tpau_2689 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Tpau_2689 PF04073 Aminoacyl-tRNA editing domain Tpau_2690 PF00591 Glycosyl transferase family, a/b domain Tpau_2690 PF02885 Glycosyl transferase family, helical bundle domain Tpau_2692 PF00510 Cytochrome c oxidase subunit III Tpau_2693 PF13442 Cytochrome C oxidase, cbb3-type, subunit III Tpau_2693 PF00034 Cytochrome c Tpau_2694 PF00355 Rieske [2Fe-2S] domain Tpau_2695 PF13631 Cytochrome b(N-terminal)/b6/petB Tpau_2697 PF00665 Integrase core domain Tpau_2697 PF13936 Helix-turn-helix domain Tpau_2700 PF13378 Enolase C-terminal domain-like Tpau_2700 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Tpau_2701 PF00106 short chain dehydrogenase Tpau_2702 PF00890 FAD binding domain Tpau_2702 PF14537 Cytochrome c3 Tpau_2703 PF07690 Major Facilitator Superfamily Tpau_2704 PF01557 Fumarylacetoacetate (FAA) hydrolase family Tpau_2708 PF13732 Domain of unknown function (DUF4162) Tpau_2708 PF00005 ABC transporter Tpau_2709 PF09900 Predicted membrane protein (DUF2127) Tpau_2710 PF00300 Histidine phosphatase superfamily (branch 1) Tpau_2710 PF13456 Reverse transcriptase-like Tpau_2711 PF02591 C4-type zinc ribbon domain Tpau_2712 PF01784 NIF3 (NGG1p interacting factor 3) Tpau_2713 PF01451 Low molecular weight phosphotyrosine protein phosphatase Tpau_2714 PF02104 SURF1 family Tpau_2715 PF03186 CobD/Cbib protein Tpau_2717 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Tpau_2717 PF07992 Pyridine nucleotide-disulphide oxidoreductase Tpau_2717 PF00403 Heavy-metal-associated domain Tpau_2720 PF00578 AhpC/TSA family Tpau_2721 PF11253 Protein of unknown function (DUF3052) Tpau_2722 PF00456 Transketolase, thiamine diphosphate binding domain Tpau_2722 PF17831 Pyruvate dehydrogenase E1 component middle domain Tpau_2723 PF17853 GGDEF-like domain Tpau_2723 PF13556 PucR C-terminal helix-turn-helix domain Tpau_2724 PF00698 Acyl transferase domain Tpau_2725 PF00550 Phosphopantetheine attachment site Tpau_2726 PF00109 Beta-ketoacyl synthase, N-terminal domain Tpau_2726 PF02801 Beta-ketoacyl synthase, C-terminal domain Tpau_2737 PF01168 Alanine racemase, N-terminal domain Tpau_2739 PF10410 DnaB-helicase binding domain of primase Tpau_2739 PF08278 DNA primase DnaG DnaB-binding Tpau_2739 PF13662 Toprim domain Tpau_2739 PF08275 DNA primase catalytic core, N-terminal domain Tpau_2739 PF01807 CHC2 zinc finger Tpau_2740 PF13286 Phosphohydrolase-associated domain Tpau_2740 PF01966 HD domain Tpau_2741 PF00313 'Cold-shock' DNA-binding domain Tpau_2743 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Tpau_2743 PF03129 Anticodon binding domain Tpau_2744 PF01022 Bacterial regulatory protein, arsR family Tpau_2745 PF01475 Ferric uptake regulator family Tpau_2747 PF07992 Pyridine nucleotide-disulphide oxidoreductase Tpau_2747 PF14759 Reductase C-terminal Tpau_2748 PF00301 Rubredoxin Tpau_2749 PF00301 Rubredoxin Tpau_2750 PF00487 Fatty acid desaturase Tpau_2751 PF01047 MarR family Tpau_2752 PF02566 OsmC-like protein Tpau_2753 PF08240 Alcohol dehydrogenase GroES-like domain Tpau_2753 PF00107 Zinc-binding dehydrogenase Tpau_2754 PF08241 Methyltransferase domain Tpau_2756 PF01255 Putative undecaprenyl diphosphate synthase Tpau_2757 PF02565 Recombination protein O C terminal Tpau_2757 PF11967 Recombination protein O N terminal Tpau_2758 PF01926 50S ribosome-binding GTPase Tpau_2758 PF07650 KH domain Tpau_2760 PF00571 CBS domain Tpau_2760 PF03471 Transporter associated domain Tpau_2760 PF01595 Cyclin M transmembrane N-terminal domain Tpau_2761 PF02130 Uncharacterized protein family UPF0054 Tpau_2762 PF02562 PhoH-like protein Tpau_2764 PF04452 RNA methyltransferase Tpau_2765 PF01556 DnaJ C terminal domain Tpau_2765 PF00226 DnaJ domain Tpau_2765 PF00684 DnaJ central domain Tpau_2766 PF01628 HrcA protein C terminal domain Tpau_2770 PF04055 Radical SAM superfamily Tpau_2771 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain Tpau_2771 PF01077 Nitrite and sulphite reductase 4Fe-4S domain Tpau_2772 PF01507 Phosphoadenosine phosphosulfate reductase family Tpau_2773 PF01507 Phosphoadenosine phosphosulfate reductase family Tpau_2774 PF00009 Elongation factor Tu GTP binding domain Tpau_2776 PF13530 Sterol carrier protein domain Tpau_2776 PF17668 Acetyltransferase (GNAT) domain Tpau_2777 PF12857 TOBE-like domain Tpau_2777 PF00005 ABC transporter Tpau_2778 PF00528 Binding-protein-dependent transport system inner membrane component Tpau_2779 PF00528 Binding-protein-dependent transport system inner membrane component Tpau_2783 PF00723 Glycosyl hydrolases family 15 Tpau_2784 PF01432 Peptidase family M3 Tpau_2787 PF03060 Nitronate monooxygenase Tpau_2790 PF03144 Elongation factor Tu domain 2 Tpau_2790 PF00009 Elongation factor Tu GTP binding domain Tpau_2790 PF06421 GTP-binding protein LepA C-terminus Tpau_2790 PF00679 Elongation factor G C-terminus Tpau_2792 PF02028 BCCT, betaine/carnitine/choline family transporter Tpau_2794 PF00732 GMC oxidoreductase Tpau_2794 PF05199 GMC oxidoreductase Tpau_2797 PF08379 Bacterial transglutaminase-like N-terminal region Tpau_2797 PF01841 Transglutaminase-like superfamily Tpau_2799 PF04174 A circularly permuted ATPgrasp Tpau_2800 PF01649 Ribosomal protein S20 Tpau_2803 PF10531 SLBB domain Tpau_2804 PF02645 Uncharacterised protein, DegV family COG1307 Tpau_2806 PF00300 Histidine phosphatase superfamily (branch 1) Tpau_2808 PF01467 Cytidylyltransferase-like Tpau_2810 PF07724 AAA domain (Cdc48 subfamily) Tpau_2810 PF17871 AAA lid domain Tpau_2810 PF10431 C-terminal, D2-small domain, of ClpB protein Tpau_2810 PF02861 Clp amino terminal domain, pathogenicity island component Tpau_2810 PF00004 ATPase family associated with various cellular activities (AAA) Tpau_2813 PF00171 Aldehyde dehydrogenase family Tpau_2814 PF01494 FAD binding domain Tpau_2825 PF08608 Wyosine base formation Tpau_2825 PF11716 Mycothiol maleylpyruvate isomerase N-terminal domain Tpau_2827 PF02770 Acyl-CoA dehydrogenase, middle domain Tpau_2827 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Tpau_2827 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Tpau_2828 PF01039 Carboxyl transferase domain Tpau_2829 PF02785 Biotin carboxylase C-terminal domain Tpau_2829 PF00289 Biotin carboxylase, N-terminal domain Tpau_2829 PF00364 Biotin-requiring enzyme Tpau_2829 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Tpau_2830 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Tpau_2830 PF02770 Acyl-CoA dehydrogenase, middle domain Tpau_2830 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Tpau_2831 PF00378 Enoyl-CoA hydratase/isomerase Tpau_2832 PF00440 Bacterial regulatory proteins, tetR family Tpau_2832 PF08361 MAATS-type transcriptional repressor, C-terminal region Tpau_2833 PF17191 RecG wedge domain Tpau_2833 PF00271 Helicase conserved C-terminal domain Tpau_2833 PF00270 DEAD/DEAH box helicase Tpau_2834 PF02734 DAK2 domain Tpau_2834 PF13684 Dihydroxyacetone kinase family Tpau_2835 PF00830 Ribosomal L28 family Tpau_2838 PF03167 Uracil DNA glycosylase superfamily Tpau_2839 PF02769 AIR synthase related protein, C-terminal domain Tpau_2839 PF00586 AIR synthase related protein, N-terminal domain Tpau_2841 PF01820 D-ala D-ala ligase N-terminus Tpau_2841 PF07478 D-ala D-ala ligase C-terminus Tpau_2842 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus Tpau_2842 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Tpau_2844 PF17941 Polyphosphate kinase C-terminal domain 1 Tpau_2844 PF13090 Polyphosphate kinase C-terminal domain 2 Tpau_2844 PF13089 Polyphosphate kinase N-terminal domain Tpau_2844 PF02503 Polyphosphate kinase middle domain Tpau_2845 PF00300 Histidine phosphatase superfamily (branch 1) Tpau_2845 PF00293 NUDIX domain Tpau_2846 PF00216 Bacterial DNA-binding protein Tpau_2847 PF00694 Aconitase C-terminal domain Tpau_2848 PF00330 Aconitase family (aconitate hydratase) Tpau_2851 PF00749 tRNA synthetases class I (E and Q), catalytic domain Tpau_2852 PF00135 Carboxylesterase family Tpau_2853 PF01557 Fumarylacetoacetate (FAA) hydrolase family Tpau_2854 PF07690 Major Facilitator Superfamily Tpau_2855 PF00180 Isocitrate/isopropylmalate dehydrogenase Tpau_2856 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Tpau_2856 PF01842 ACT domain Tpau_2856 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Tpau_2858 PF13193 AMP-binding enzyme C-terminal domain Tpau_2858 PF00501 AMP-binding enzyme Tpau_2861 PF11583 P-aminobenzoate N-oxygenase AurF Tpau_2862 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain Tpau_2862 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain Tpau_2863 PF10369 Small subunit of acetolactate synthase Tpau_2864 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Tpau_2864 PF00205 Thiamine pyrophosphate enzyme, central domain Tpau_2864 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Tpau_2866 PF00920 Dehydratase family Tpau_2867 PF07681 DoxX Tpau_2869 PF02934 GatB/GatE catalytic domain Tpau_2869 PF02637 GatB domain Tpau_2871 PF00365 Phosphofructokinase Tpau_2872 PF00072 Response regulator receiver domain Tpau_2872 PF00196 Bacterial regulatory proteins, luxR family Tpau_2873 PF07730 Histidine kinase Tpau_2876 PF02082 Transcriptional regulator Tpau_2877 PF02627 Carboxymuconolactone decarboxylase family Tpau_2879 PF01425 Amidase Tpau_2880 PF02686 Glu-tRNAGln amidotransferase C subunit Tpau_2882 PF00171 Aldehyde dehydrogenase family Tpau_2883 PF08240 Alcohol dehydrogenase GroES-like domain Tpau_2883 PF00107 Zinc-binding dehydrogenase Tpau_2884 PF00501 AMP-binding enzyme Tpau_2884 PF13193 AMP-binding enzyme C-terminal domain Tpau_2887 PF07722 Peptidase C26 Tpau_2890 PF00561 alpha/beta hydrolase fold Tpau_2891 PF00743 Flavin-binding monooxygenase-like Tpau_2892 PF01872 RibD C-terminal domain Tpau_2895 PF01266 FAD dependent oxidoreductase Tpau_2895 PF05430 S-adenosyl-L-methionine-dependent methyltransferase Tpau_2900 PF01653 NAD-dependent DNA ligase adenylation domain Tpau_2900 PF12826 Helix-hairpin-helix motif Tpau_2900 PF03119 NAD-dependent DNA ligase C4 zinc finger domain Tpau_2900 PF03120 NAD-dependent DNA ligase OB-fold domain Tpau_2900 PF00533 BRCA1 C Terminus (BRCT) domain Tpau_2903 PF00296 Luciferase-like monooxygenase Tpau_2907 PF00909 Ammonium Transporter Family Tpau_2910 PF00266 Aminotransferase class-V Tpau_2915 PF01431 Peptidase family M13 Tpau_2915 PF05649 Peptidase family M13 Tpau_2916 PF00766 Electron transfer flavoprotein FAD-binding domain Tpau_2916 PF01012 Electron transfer flavoprotein domain Tpau_2917 PF01012 Electron transfer flavoprotein domain Tpau_2918 PF08241 Methyltransferase domain Tpau_2919 PF03065 Glycosyl hydrolase family 57 Tpau_2919 PF09210 Domain of unknown function (DUF1957) Tpau_2920 PF13439 Glycosyltransferase Family 4 Tpau_2920 PF00534 Glycosyl transferases group 1 Tpau_2926 PF00132 Bacterial transferase hexapeptide (six repeats) Tpau_2929 PF00557 Metallopeptidase family M24 Tpau_2931 PF07859 alpha/beta hydrolase fold Tpau_2932 PF00155 Aminotransferase class I and II Tpau_2934 PF18096 THUMP domain-like Tpau_2936 PF00378 Enoyl-CoA hydratase/isomerase Tpau_2938 PF00005 ABC transporter Tpau_2939 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) Tpau_2939 PF18390 Glycogen debranching enzyme C-terminal domain Tpau_2939 PF00128 Alpha amylase, catalytic domain Tpau_2942 PF00115 Cytochrome C and Quinol oxidase polypeptide I Tpau_2944 PF11583 P-aminobenzoate N-oxygenase AurF Tpau_2945 PF07992 Pyridine nucleotide-disulphide oxidoreductase Tpau_2945 PF00037 4Fe-4S binding domain Tpau_2947 PF00484 Carbonic anhydrase Tpau_2950 PF00268 Ribonucleotide reductase, small chain Tpau_2955 PF13936 Helix-turn-helix domain Tpau_2955 PF00665 Integrase core domain Tpau_2958 PF00440 Bacterial regulatory proteins, tetR family Tpau_2959 PF03176 MMPL family Tpau_2961 PF00576 HIUase/Transthyretin family Tpau_2962 PF01494 FAD binding domain Tpau_2965 PF00860 Permease family Tpau_2966 PF01979 Amidohydrolase family Tpau_2967 PF13556 PucR C-terminal helix-turn-helix domain Tpau_2967 PF17853 GGDEF-like domain Tpau_2967 PF05651 Putative sugar diacid recognition Tpau_2968 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Tpau_2968 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase Tpau_2968 PF01799 [2Fe-2S] binding domain Tpau_2969 PF02867 Ribonucleotide reductase, barrel domain Tpau_2969 PF00317 Ribonucleotide reductase, all-alpha domain Tpau_2969 PF08343 Ribonucleotide reductase N-terminal Tpau_2970 PF07972 NrdI Flavodoxin like Tpau_2972 PF03358 NADPH-dependent FMN reductase Tpau_2974 PF00106 short chain dehydrogenase Tpau_2974 PF00561 alpha/beta hydrolase fold Tpau_2976 PF07683 Cobalamin synthesis protein cobW C-terminal domain Tpau_2976 PF02492 CobW/HypB/UreG, nucleotide-binding domain Tpau_2979 PF00528 Binding-protein-dependent transport system inner membrane component Tpau_2980 PF00005 ABC transporter Tpau_2981 PF00884 Sulfatase Tpau_2982 PF02668 Taurine catabolism dioxygenase TauD, TfdA family Tpau_2984 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Tpau_2984 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain Tpau_2984 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain Tpau_2986 PF12833 Helix-turn-helix domain Tpau_2986 PF06445 GyrI-like small molecule binding domain Tpau_2988 PF01022 Bacterial regulatory protein, arsR family Tpau_2995 PF10944 Protein of unknown function (DUF2630) Tpau_2996 PF01144 Coenzyme A transferase Tpau_2998 PF13619 KTSC domain Tpau_2999 PF07992 Pyridine nucleotide-disulphide oxidoreductase Tpau_2999 PF13192 Thioredoxin domain Tpau_3000 PF10417 C-terminal domain of 1-Cys peroxiredoxin Tpau_3000 PF00578 AhpC/TSA family Tpau_3003 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Tpau_3003 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Tpau_3003 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Tpau_3003 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Tpau_3004 PF02447 GntP family permease Tpau_3005 PF01081 KDPG and KHG aldolase Tpau_3006 PF07969 Amidohydrolase family Tpau_3008 PF00294 pfkB family carbohydrate kinase Tpau_3009 PF01614 Bacterial transcriptional regulator Tpau_3009 PF09339 IclR helix-turn-helix domain Tpau_3010 PF01042 Endoribonuclease L-PSP Tpau_3011 PF01545 Cation efflux family Tpau_3011 PF16916 Dimerisation domain of Zinc Transporter Tpau_3012 PF00561 alpha/beta hydrolase fold Tpau_3014 PF07929 Plasmid pRiA4b ORF-3-like protein Tpau_3016 PF01695 IstB-like ATP binding protein Tpau_3020 PF01668 SmpB protein Tpau_3021 PF02687 FtsX-like permease family Tpau_3021 PF18075 FtsX extracellular domain Tpau_3022 PF00005 ABC transporter Tpau_3024 PF00924 Mechanosensitive ion channel Tpau_3025 PF03462 PCRF domain Tpau_3025 PF00472 RF-1 domain Tpau_3027 PF00459 Inositol monophosphatase family Tpau_3028 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Tpau_3028 PF02770 Acyl-CoA dehydrogenase, middle domain Tpau_3028 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Tpau_3029 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Tpau_3029 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Tpau_3029 PF02770 Acyl-CoA dehydrogenase, middle domain Tpau_3031 PF06737 Transglycosylase-like domain Tpau_3032 PF07690 Major Facilitator Superfamily Tpau_3033 PF01925 Sulfite exporter TauE/SafE Tpau_3034 PF12464 Maltose acetyltransferase Tpau_3034 PF00132 Bacterial transferase hexapeptide (six repeats) Tpau_3036 PF03009 Glycerophosphoryl diester phosphodiesterase family Tpau_3037 PF03699 Uncharacterised protein family (UPF0182) Tpau_3039 PF05362 Lon protease (S16) C-terminal proteolytic domain Tpau_3039 PF13180 PDZ domain Tpau_3043 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Tpau_3043 PF02770 Acyl-CoA dehydrogenase, middle domain Tpau_3043 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Tpau_3044 PF02178 AT hook motif Tpau_3044 PF02467 Transcription factor WhiB Tpau_3046 PF00570 HRDC domain Tpau_3046 PF13361 UvrD-like helicase C-terminal domain Tpau_3046 PF00580 UvrD/REP helicase N-terminal domain Tpau_3048 PF00462 Glutaredoxin Tpau_3050 PF00293 NUDIX domain Tpau_3050 PF09297 NADH pyrophosphatase zinc ribbon domain Tpau_3050 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain Tpau_3051 PF00581 Rhodanese-like domain Tpau_3053 PF00732 GMC oxidoreductase Tpau_3053 PF05199 GMC oxidoreductase Tpau_3054 PF00005 ABC transporter Tpau_3054 PF08402 TOBE domain Tpau_3055 PF00528 Binding-protein-dependent transport system inner membrane component Tpau_3057 PF09594 Glycosyltransferase family 87 Tpau_3060 PF07690 Major Facilitator Superfamily Tpau_3061 PF00356 Bacterial regulatory proteins, lacI family Tpau_3064 PF00343 Carbohydrate phosphorylase Tpau_3064 PF11897 Protein of unknown function (DUF3417) Tpau_3068 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase Tpau_3068 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase Tpau_3069 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Tpau_3069 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Tpau_3069 PF02770 Acyl-CoA dehydrogenase, middle domain Tpau_3070 PF00171 Aldehyde dehydrogenase family Tpau_3071 PF13193 AMP-binding enzyme C-terminal domain Tpau_3071 PF00501 AMP-binding enzyme Tpau_3072 PF00005 ABC transporter Tpau_3076 PF01070 FMN-dependent dehydrogenase Tpau_3077 PF13419 Haloacid dehalogenase-like hydrolase Tpau_3081 PF07992 Pyridine nucleotide-disulphide oxidoreductase Tpau_3081 PF14759 Reductase C-terminal Tpau_3083 PF02525 Flavodoxin-like fold Tpau_3089 PF13673 Acetyltransferase (GNAT) domain Tpau_3093 PF00578 AhpC/TSA family Tpau_3099 PF07690 Major Facilitator Superfamily Tpau_3101 PF01926 50S ribosome-binding GTPase Tpau_3101 PF06071 Protein of unknown function (DUF933) Tpau_3102 PF13407 Periplasmic binding protein domain Tpau_3104 PF00005 ABC transporter Tpau_3105 PF02554 Carbon starvation protein CstA Tpau_3105 PF13722 5TM C-terminal transporter carbon starvation CstA Tpau_3109 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain Tpau_3109 PF02805 Metal binding domain of Ada Tpau_3109 PF12833 Helix-turn-helix domain Tpau_3109 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain Tpau_3110 PF01594 AI-2E family transporter Tpau_3111 PF02646 RmuC family Tpau_3114 PF02401 LytB protein Tpau_3116 PF02601 Exonuclease VII, large subunit Tpau_3116 PF13742 OB-fold nucleic acid binding domain Tpau_3117 PF02609 Exonuclease VII small subunit Tpau_3119 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded Tpau_3120 PF10415 Fumarase C C-terminus Tpau_3120 PF00206 Lyase Tpau_3124 PF05683 Fumarase C-terminus Tpau_3124 PF05681 Fumarate hydratase (Fumerase) Tpau_3128 PF02562 PhoH-like protein Tpau_3128 PF13638 PIN domain Tpau_3129 PF03405 Fatty acid desaturase Tpau_3130 PF00464 Serine hydroxymethyltransferase Tpau_3132 PF00485 Phosphoribulokinase / Uridine kinase family Tpau_3135 PF01255 Putative undecaprenyl diphosphate synthase Tpau_3136 PF00005 ABC transporter Tpau_3137 PF04069 Substrate binding domain of ABC-type glycine betaine transport system Tpau_3138 PF00528 Binding-protein-dependent transport system inner membrane component Tpau_3139 PF00106 short chain dehydrogenase Tpau_3141 PF00793 DAHP synthetase I family Tpau_3142 PF03190 Protein of unknown function, DUF255 Tpau_3143 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase Tpau_3145 PF02585 GlcNAc-PI de-N-acetylase Tpau_3148 PF03449 Transcription elongation factor, N-terminal Tpau_3148 PF01272 Transcription elongation factor, GreA/GreB, C-term Tpau_3149 PF00457 Glycosyl hydrolases family 11 Tpau_3149 PF01522 Polysaccharide deacetylase Tpau_3151 PF01053 Cys/Met metabolism PLP-dependent enzyme Tpau_3152 PF00571 CBS domain Tpau_3152 PF00291 Pyridoxal-phosphate dependent enzyme Tpau_3158 PF01872 RibD C-terminal domain Tpau_3160 PF00893 Small Multidrug Resistance protein Tpau_3162 PF02541 Ppx/GppA phosphatase family Tpau_3165 PF00113 Enolase, C-terminal TIM barrel domain Tpau_3165 PF03952 Enolase, N-terminal domain Tpau_3168 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 Tpau_3169 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit Tpau_3170 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit Tpau_3171 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit Tpau_3173 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Tpau_3173 PF10531 SLBB domain Tpau_3173 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Tpau_3174 PF00384 Molybdopterin oxidoreductase Tpau_3174 PF01568 Molydopterin dinucleotide binding domain Tpau_3174 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Tpau_3175 PF00146 NADH dehydrogenase Tpau_3176 PF12838 4Fe-4S dicluster domain Tpau_3177 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 Tpau_3178 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L Tpau_3179 PF00361 Proton-conducting membrane transporter Tpau_3179 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Tpau_3180 PF00361 Proton-conducting membrane transporter Tpau_3181 PF00361 Proton-conducting membrane transporter Tpau_3183 PF00440 Bacterial regulatory proteins, tetR family Tpau_3188 PF03583 Secretory lipase Tpau_3189 PF02559 CarD-like/TRCF domain Tpau_3189 PF17757 UvrB interaction domain Tpau_3189 PF03461 TRCF domain Tpau_3189 PF00271 Helicase conserved C-terminal domain Tpau_3189 PF00270 DEAD/DEAH box helicase Tpau_3190 PF03819 MazG nucleotide pyrophosphohydrolase domain Tpau_3194 PF12804 MobA-like NTP transferase domain Tpau_3194 PF00132 Bacterial transferase hexapeptide (six repeats) Tpau_3195 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase Tpau_3195 PF14572 Phosphoribosyl synthetase-associated domain Tpau_3196 PF03960 ArsC family Tpau_3197 PF03466 LysR substrate binding domain Tpau_3197 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Tpau_3198 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Tpau_3198 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Tpau_3201 PF04261 Dyp-type peroxidase family Tpau_3202 PF04454 Encapsulating protein for peroxidase Tpau_3203 PF02861 Clp amino terminal domain, pathogenicity island component Tpau_3203 PF17871 AAA lid domain Tpau_3203 PF07724 AAA domain (Cdc48 subfamily) Tpau_3203 PF00004 ATPase family associated with various cellular activities (AAA) Tpau_3203 PF10431 C-terminal, D2-small domain, of ClpB protein Tpau_3208 PF07858 Limonene-1,2-epoxide hydrolase catalytic domain Tpau_3209 PF14693 Ribosomal protein TL5, C-terminal domain Tpau_3209 PF01386 Ribosomal L25p family Tpau_3210 PF01195 Peptidyl-tRNA hydrolase Tpau_3212 PF16658 Class II release factor RF3, C-terminal domain Tpau_3212 PF00009 Elongation factor Tu GTP binding domain Tpau_3214 PF01810 LysE type translocator Tpau_3218 PF13276 HTH-like domain Tpau_3218 PF00665 Integrase core domain Tpau_3224 PF00378 Enoyl-CoA hydratase/isomerase Tpau_3225 PF16326 ABC transporter C-terminal domain Tpau_3225 PF00005 ABC transporter Tpau_3225 PF12848 ABC transporter Tpau_3227 PF01695 IstB-like ATP binding protein Tpau_3229 PF07929 Plasmid pRiA4b ORF-3-like protein Tpau_3230 PF16326 ABC transporter C-terminal domain Tpau_3230 PF00005 ABC transporter Tpau_3230 PF12848 ABC transporter Tpau_3231 PF00288 GHMP kinases N terminal domain Tpau_3231 PF08544 GHMP kinases C terminal Tpau_3232 PF00398 Ribosomal RNA adenine dimethylase Tpau_3233 PF07501 G5 domain Tpau_3233 PF03990 G5-linked-Ubiquitin-like domain Tpau_3233 PF06737 Transglycosylase-like domain Tpau_3234 PF01026 TatD related DNase Tpau_3236 PF09334 tRNA synthetases class I (M) Tpau_3238 PF00425 chorismate binding enzyme Tpau_3238 PF04715 Anthranilate synthase component I, N terminal region Tpau_3240 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Tpau_3241 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase Tpau_3241 PF16192 C-terminal four TMM region of protein-O-mannosyltransferase Tpau_3242 PF07690 Major Facilitator Superfamily Tpau_3244 PF03814 Potassium-transporting ATPase A subunit Tpau_3246 PF02669 K+-transporting ATPase, c chain Tpau_3247 PF00582 Universal stress protein family Tpau_3247 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tpau_3247 PF02702 Osmosensitive K+ channel His kinase sensor domain Tpau_3247 PF00512 His Kinase A (phospho-acceptor) domain Tpau_3247 PF13493 Domain of unknown function (DUF4118) Tpau_3248 PF00072 Response regulator receiver domain Tpau_3248 PF00486 Transcriptional regulatory protein, C terminal Tpau_3249 PF04542 Sigma-70 region 2 Tpau_3249 PF12680 SnoaL-like domain Tpau_3249 PF08281 Sigma-70, region 4 Tpau_3251 PF00202 Aminotransferase class-III Tpau_3254 PF01037 Lrp/AsnC ligand binding domain Tpau_3255 PF03591 AzlC protein Tpau_3257 PF00561 alpha/beta hydrolase fold Tpau_3263 PF01638 HxlR-like helix-turn-helix Tpau_3264 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase Tpau_3266 PF13302 Acetyltransferase (GNAT) domain Tpau_3267 PF00994 Probable molybdopterin binding domain Tpau_3267 PF03453 MoeA N-terminal region (domain I and II) Tpau_3267 PF03454 MoeA C-terminal region (domain IV) Tpau_3268 PF00483 Nucleotidyl transferase Tpau_3269 PF01812 5-formyltetrahydrofolate cyclo-ligase family Tpau_3277 PF01741 Large-conductance mechanosensitive channel, MscL Tpau_3283 PF00994 Probable molybdopterin binding domain Tpau_3284 PF13180 PDZ domain Tpau_3285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tpau_3285 PF00672 HAMP domain Tpau_3285 PF00512 His Kinase A (phospho-acceptor) domain Tpau_3286 PF00072 Response regulator receiver domain Tpau_3286 PF00486 Transcriptional regulatory protein, C terminal Tpau_3287 PF03458 UPF0126 domain Tpau_3288 PF01783 Ribosomal L32p protein family Tpau_3289 PF01197 Ribosomal protein L31 Tpau_3290 PF02492 CobW/HypB/UreG, nucleotide-binding domain Tpau_3290 PF07683 Cobalamin synthesis protein cobW C-terminal domain Tpau_3291 PF00830 Ribosomal L28 family Tpau_3292 PF00471 Ribosomal protein L33 Tpau_3293 PF00253 Ribosomal protein S14p/S29e Tpau_3294 PF01084 Ribosomal protein S18 Tpau_3299 PF01078 Magnesium chelatase, subunit ChlI Tpau_3299 PF17863 AAA lid domain Tpau_3302 PF01022 Bacterial regulatory protein, arsR family Tpau_3304 PF01808 AICARFT/IMPCHase bienzyme Tpau_3304 PF02142 MGS-like domain Tpau_3305 PF00551 Formyl transferase Tpau_3309 PF07690 Major Facilitator Superfamily Tpau_3310 PF00549 CoA-ligase Tpau_3310 PF02629 CoA binding domain Tpau_3311 PF00549 CoA-ligase Tpau_3311 PF08442 ATP-grasp domain Tpau_3312 PF07161 LppX_LprAFG lipoprotein Tpau_3315 PF00501 AMP-binding enzyme Tpau_3315 PF13193 AMP-binding enzyme C-terminal domain Tpau_3316 PF13193 AMP-binding enzyme C-terminal domain Tpau_3316 PF00501 AMP-binding enzyme Tpau_3317 PF03328 HpcH/HpaI aldolase/citrate lyase family Tpau_3319 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Tpau_3319 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Tpau_3319 PF02770 Acyl-CoA dehydrogenase, middle domain Tpau_3320 PF02785 Biotin carboxylase C-terminal domain Tpau_3320 PF00289 Biotin carboxylase, N-terminal domain Tpau_3320 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Tpau_3320 PF00364 Biotin-requiring enzyme Tpau_3321 PF01039 Carboxyl transferase domain Tpau_3323 PF02308 MgtC family Tpau_3324 PF00528 Binding-protein-dependent transport system inner membrane component Tpau_3325 PF00005 ABC transporter Tpau_3326 PF01551 Peptidase family M23 Tpau_3327 PF13361 UvrD-like helicase C-terminal domain Tpau_3327 PF00580 UvrD/REP helicase N-terminal domain Tpau_3331 PF01817 Chorismate mutase type II Tpau_3332 PF09037 Stf0 sulphotransferase Tpau_3333 PF01507 Phosphoadenosine phosphosulfate reductase family Tpau_3334 PF00009 Elongation factor Tu GTP binding domain Tpau_3335 PF03781 Sulfatase-modifying factor enzyme 1 Tpau_3336 PF16385 Domain of unknown function Tpau_3336 PF00884 Sulfatase Tpau_3337 PF00171 Aldehyde dehydrogenase family Tpau_3338 PF00342 Phosphoglucose isomerase Tpau_3339 PF00144 Beta-lactamase Tpau_3342 PF00106 short chain dehydrogenase Tpau_3344 PF00155 Aminotransferase class I and II Tpau_3344 PF00392 Bacterial regulatory proteins, gntR family Tpau_3347 PF04261 Dyp-type peroxidase family Tpau_3348 PF03239 Iron permease FTR1 family Tpau_3349 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain Tpau_3349 PF06827 Zinc finger found in FPG and IleRS Tpau_3350 PF00459 Inositol monophosphatase family Tpau_3353 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Tpau_3357 PF00075 RNase H Tpau_3359 PF00149 Calcineurin-like phosphoesterase Tpau_3362 PF12706 Beta-lactamase superfamily domain Tpau_3363 PF00378 Enoyl-CoA hydratase/isomerase Tpau_3364 PF13454 FAD-NAD(P)-binding Tpau_3367 PF05108 Type VII secretion system ESX-1, transport TM domain B Tpau_3379 PF09335 SNARE associated Golgi protein Tpau_3380 PF01416 tRNA pseudouridine synthase Tpau_3381 PF01196 Ribosomal protein L17 Tpau_3382 PF01000 RNA polymerase Rpb3/RpoA insert domain Tpau_3382 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain Tpau_3382 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain Tpau_3383 PF01479 S4 domain Tpau_3383 PF00163 Ribosomal protein S4/S9 N-terminal domain Tpau_3384 PF00411 Ribosomal protein S11 Tpau_3385 PF00416 Ribosomal protein S13/S18 Tpau_3386 PF00444 Ribosomal protein L36 Tpau_3388 PF01176 Translation initiation factor 1A / IF-1 Tpau_3389 PF00293 NUDIX domain Tpau_3390 PF01053 Cys/Met metabolism PLP-dependent enzyme Tpau_3393 PF07739 TipAS antibiotic-recognition domain Tpau_3393 PF13411 MerR HTH family regulatory protein Tpau_3394 PF00375 Sodium:dicarboxylate symporter family Tpau_3395 PF00557 Metallopeptidase family M24 Tpau_3397 PF00344 SecY translocase Tpau_3398 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A Tpau_3399 PF00327 Ribosomal protein L30p/L7e Tpau_3400 PF03719 Ribosomal protein S5, C-terminal domain Tpau_3400 PF00333 Ribosomal protein S5, N-terminal domain Tpau_3401 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast Tpau_3402 PF00347 Ribosomal protein L6 Tpau_3403 PF00410 Ribosomal protein S8 Tpau_3406 PF01774 UreD urease accessory protein Tpau_3407 PF02492 CobW/HypB/UreG, nucleotide-binding domain Tpau_3408 PF01730 UreF Tpau_3409 PF01979 Amidohydrolase family Tpau_3409 PF00449 Urease alpha-subunit, N-terminal domain Tpau_3410 PF00699 Urease beta subunit Tpau_3411 PF00547 Urease, gamma subunit Tpau_3418 PF00253 Ribosomal protein S14p/S29e Tpau_3419 PF00281 Ribosomal protein L5 Tpau_3419 PF00673 ribosomal L5P family C-terminus Tpau_3420 PF00467 KOW motif Tpau_3420 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 Tpau_3421 PF00238 Ribosomal protein L14p/L23e Tpau_3424 PF00271 Helicase conserved C-terminal domain Tpau_3424 PF00270 DEAD/DEAH box helicase Tpau_3426 PF00366 Ribosomal protein S17 Tpau_3427 PF00831 Ribosomal L29 protein Tpau_3428 PF00252 Ribosomal protein L16p/L10e Tpau_3429 PF00189 Ribosomal protein S3, C-terminal domain Tpau_3429 PF07650 KH domain Tpau_3430 PF00237 Ribosomal protein L22p/L17e Tpau_3431 PF00203 Ribosomal protein S19 Tpau_3432 PF03947 Ribosomal Proteins L2, C-terminal domain Tpau_3432 PF00181 Ribosomal Proteins L2, RNA binding domain Tpau_3433 PF00276 Ribosomal protein L23 Tpau_3434 PF00573 Ribosomal protein L4/L1 family Tpau_3435 PF00297 Ribosomal protein L3 Tpau_3436 PF00338 Ribosomal protein S10p/S20e Tpau_3441 PF02515 CoA-transferase family III Tpau_3444 PF00743 Flavin-binding monooxygenase-like Tpau_3445 PF03109 ABC1 family Tpau_3447 PF00970 Oxidoreductase FAD-binding domain Tpau_3447 PF00111 2Fe-2S iron-sulfur cluster binding domain Tpau_3447 PF00175 Oxidoreductase NAD-binding domain Tpau_3448 PF00107 Zinc-binding dehydrogenase Tpau_3448 PF08240 Alcohol dehydrogenase GroES-like domain Tpau_3459 PF13936 Helix-turn-helix domain Tpau_3459 PF00665 Integrase core domain Tpau_3462 PF00440 Bacterial regulatory proteins, tetR family Tpau_3463 PF01494 FAD binding domain Tpau_3466 PF03143 Elongation factor Tu C-terminal domain Tpau_3466 PF03144 Elongation factor Tu domain 2 Tpau_3466 PF00009 Elongation factor Tu GTP binding domain Tpau_3467 PF03764 Elongation factor G, domain IV Tpau_3467 PF03144 Elongation factor Tu domain 2 Tpau_3467 PF00679 Elongation factor G C-terminus Tpau_3467 PF00009 Elongation factor Tu GTP binding domain Tpau_3467 PF14492 Elongation Factor G, domain II Tpau_3468 PF00177 Ribosomal protein S7p/S5e Tpau_3469 PF00164 Ribosomal protein S12/S23 Tpau_3472 PF00483 Nucleotidyl transferase Tpau_3474 PF08240 Alcohol dehydrogenase GroES-like domain Tpau_3474 PF00107 Zinc-binding dehydrogenase Tpau_3475 PF00975 Thioesterase domain Tpau_3476 PF00109 Beta-ketoacyl synthase, N-terminal domain Tpau_3476 PF00550 Phosphopantetheine attachment site Tpau_3476 PF14765 Polyketide synthase dehydratase Tpau_3476 PF16197 Ketoacyl-synthetase C-terminal extension Tpau_3476 PF08659 KR domain Tpau_3476 PF00698 Acyl transferase domain Tpau_3476 PF02801 Beta-ketoacyl synthase, C-terminal domain Tpau_3477 PF00698 Acyl transferase domain Tpau_3477 PF08659 KR domain Tpau_3477 PF00109 Beta-ketoacyl synthase, N-terminal domain Tpau_3477 PF02801 Beta-ketoacyl synthase, C-terminal domain Tpau_3477 PF16197 Ketoacyl-synthetase C-terminal extension Tpau_3477 PF00550 Phosphopantetheine attachment site Tpau_3477 PF14765 Polyketide synthase dehydratase Tpau_3478 PF00698 Acyl transferase domain Tpau_3478 PF14765 Polyketide synthase dehydratase Tpau_3478 PF00550 Phosphopantetheine attachment site Tpau_3478 PF08659 KR domain Tpau_3478 PF16197 Ketoacyl-synthetase C-terminal extension Tpau_3478 PF00109 Beta-ketoacyl synthase, N-terminal domain Tpau_3478 PF02801 Beta-ketoacyl synthase, C-terminal domain Tpau_3479 PF00698 Acyl transferase domain Tpau_3479 PF00550 Phosphopantetheine attachment site Tpau_3479 PF18369 Polyketide synthase dimerisation element domain Tpau_3479 PF08659 KR domain Tpau_3479 PF02801 Beta-ketoacyl synthase, C-terminal domain Tpau_3479 PF00109 Beta-ketoacyl synthase, N-terminal domain Tpau_3479 PF16197 Ketoacyl-synthetase C-terminal extension Tpau_3479 PF00975 Thioesterase domain Tpau_3479 PF08990 Erythronolide synthase docking Tpau_3480 PF14765 Polyketide synthase dehydratase Tpau_3480 PF08659 KR domain Tpau_3480 PF00698 Acyl transferase domain Tpau_3480 PF00550 Phosphopantetheine attachment site Tpau_3480 PF16197 Ketoacyl-synthetase C-terminal extension Tpau_3480 PF00109 Beta-ketoacyl synthase, N-terminal domain Tpau_3480 PF02801 Beta-ketoacyl synthase, C-terminal domain Tpau_3481 PF03559 NDP-hexose 2,3-dehydratase Tpau_3482 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Tpau_3487 PF06722 Protein of unknown function (DUF1205) Tpau_3488 PF00005 ABC transporter Tpau_3494 PF18665 Tetracyclin repressor-like, C-terminal domain Tpau_3494 PF00440 Bacterial regulatory proteins, tetR family Tpau_3497 PF00005 ABC transporter Tpau_3499 PF01266 FAD dependent oxidoreductase Tpau_3500 PF00440 Bacterial regulatory proteins, tetR family Tpau_3503 PF01643 Acyl-ACP thioesterase Tpau_3507 PF00072 Response regulator receiver domain Tpau_3507 PF00196 Bacterial regulatory proteins, luxR family Tpau_3509 PF07732 Multicopper oxidase Tpau_3509 PF07731 Multicopper oxidase Tpau_3513 PF00743 Flavin-binding monooxygenase-like Tpau_3515 PF00106 short chain dehydrogenase Tpau_3516 PF07859 alpha/beta hydrolase fold Tpau_3517 PF00970 Oxidoreductase FAD-binding domain Tpau_3517 PF00111 2Fe-2S iron-sulfur cluster binding domain Tpau_3517 PF00175 Oxidoreductase NAD-binding domain Tpau_3519 PF00083 Sugar (and other) transporter Tpau_3519 PF07690 Major Facilitator Superfamily Tpau_3520 PF02626 Carboxyltransferase domain, subdomain A and B Tpau_3521 PF00561 alpha/beta hydrolase fold Tpau_3522 PF08281 Sigma-70, region 4 Tpau_3522 PF04542 Sigma-70 region 2 Tpau_3522 PF12680 SnoaL-like domain Tpau_3525 PF13579 Glycosyl transferase 4-like domain Tpau_3525 PF00534 Glycosyl transferases group 1 Tpau_3526 PF08402 TOBE domain Tpau_3526 PF00005 ABC transporter Tpau_3527 PF13416 Bacterial extracellular solute-binding protein Tpau_3528 PF00528 Binding-protein-dependent transport system inner membrane component Tpau_3529 PF00528 Binding-protein-dependent transport system inner membrane component Tpau_3531 PF00005 ABC transporter Tpau_3534 PF00196 Bacterial regulatory proteins, luxR family Tpau_3535 PF03405 Fatty acid desaturase Tpau_3536 PF03405 Fatty acid desaturase Tpau_3537 PF01207 Dihydrouridine synthase (Dus) Tpau_3538 PF01895 PhoU domain Tpau_3540 PF00005 ABC transporter Tpau_3541 PF00528 Binding-protein-dependent transport system inner membrane component Tpau_3542 PF00528 Binding-protein-dependent transport system inner membrane component Tpau_3543 PF12849 PBP superfamily domain Tpau_3544 PF00583 Acetyltransferase (GNAT) family Tpau_3545 PF00486 Transcriptional regulatory protein, C terminal Tpau_3547 PF00581 Rhodanese-like domain Tpau_3548 PF07210 Protein of unknown function (DUF1416) Tpau_3550 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain Tpau_3550 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain Tpau_3551 PF13532 2OG-Fe(II) oxygenase superfamily Tpau_3553 PF00072 Response regulator receiver domain Tpau_3553 PF00486 Transcriptional regulatory protein, C terminal Tpau_3554 PF00485 Phosphoribulokinase / Uridine kinase family Tpau_3556 PF00005 ABC transporter Tpau_3557 PF02653 Branched-chain amino acid transport system / permease component Tpau_3558 PF13407 Periplasmic binding protein domain Tpau_3559 PF00356 Bacterial regulatory proteins, lacI family Tpau_3561 PF08768 Domain of unknown function (DUF1794) Tpau_3566 PF00664 ABC transporter transmembrane region Tpau_3566 PF00005 ABC transporter Tpau_3567 PF00005 ABC transporter Tpau_3567 PF00664 ABC transporter transmembrane region Tpau_3568 PF02322 Cytochrome bd terminal oxidase subunit II Tpau_3570 PF00324 Amino acid permease Tpau_3572 PF08669 Glycine cleavage T-protein C-terminal barrel domain Tpau_3572 PF01571 Aminomethyltransferase folate-binding domain Tpau_3575 PF02769 AIR synthase related protein, C-terminal domain Tpau_3575 PF00586 AIR synthase related protein, N-terminal domain Tpau_3576 PF00156 Phosphoribosyl transferase domain Tpau_3582 PF01370 NAD dependent epimerase/dehydratase family Tpau_3582 PF08338 Domain of unknown function (DUF1731) Tpau_3587 PF04542 Sigma-70 region 2 Tpau_3587 PF04545 Sigma-70, region 4 Tpau_3588 PF10099 Anti-sigma-K factor rskA Tpau_3590 PF00990 Diguanylate cyclase, GGDEF domain Tpau_3590 PF17151 Periplasmic sensor domain Tpau_3591 PF00324 Amino acid permease Tpau_3592 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain Tpau_3592 PF02769 AIR synthase related protein, C-terminal domain Tpau_3592 PF00586 AIR synthase related protein, N-terminal domain Tpau_3593 PF00009 Elongation factor Tu GTP binding domain Tpau_3594 PF01507 Phosphoadenosine phosphosulfate reductase family Tpau_3595 PF00375 Sodium:dicarboxylate symporter family Tpau_3596 PF17203 Single cache domain 3 Tpau_3596 PF00989 PAS fold Tpau_3596 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tpau_3596 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain Tpau_3597 PF00072 Response regulator receiver domain Tpau_3602 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Tpau_3603 PF00005 ABC transporter Tpau_3603 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Tpau_3604 PF12911 N-terminal TM domain of oligopeptide transport permease C Tpau_3604 PF00528 Binding-protein-dependent transport system inner membrane component Tpau_3605 PF00528 Binding-protein-dependent transport system inner membrane component Tpau_3608 PF00106 short chain dehydrogenase Tpau_3609 PF11799 impB/mucB/samB family C-terminal domain Tpau_3609 PF00817 impB/mucB/samB family Tpau_3610 PF00384 Molybdopterin oxidoreductase Tpau_3610 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Tpau_3610 PF01568 Molydopterin dinucleotide binding domain Tpau_3611 PF00324 Amino acid permease Tpau_3612 PF02127 Aminopeptidase I zinc metalloprotease (M18) Tpau_3614 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase Tpau_3617 PF00255 Glutathione peroxidase Tpau_3619 PF07690 Major Facilitator Superfamily Tpau_3621 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain Tpau_3621 PF00326 Prolyl oligopeptidase family Tpau_3622 PF01259 SAICAR synthetase Tpau_3624 PF00206 Lyase Tpau_3624 PF10397 Adenylosuccinate lyase C-terminus Tpau_3626 PF02844 Phosphoribosylglycinamide synthetase, N domain Tpau_3626 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain Tpau_3626 PF02843 Phosphoribosylglycinamide synthetase, C domain Tpau_3629 PF01230 HIT domain Tpau_3630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tpau_3630 PF00512 His Kinase A (phospho-acceptor) domain Tpau_3630 PF00989 PAS fold Tpau_3630 PF16736 Single Cache-like Tpau_3631 PF00072 Response regulator receiver domain Tpau_3631 PF00486 Transcriptional regulatory protein, C terminal Tpau_3633 PF05726 Pirin C-terminal cupin domain Tpau_3633 PF02678 Pirin Tpau_3634 PF02627 Carboxymuconolactone decarboxylase family Tpau_3638 PF00378 Enoyl-CoA hydratase/isomerase Tpau_3642 PF00982 Glycosyltransferase family 20 Tpau_3644 PF01841 Transglutaminase-like superfamily Tpau_3644 PF08379 Bacterial transglutaminase-like N-terminal region Tpau_3645 PF03734 L,D-transpeptidase catalytic domain Tpau_3645 PF17964 Bacterial Ig domain Tpau_3646 PF01565 FAD binding domain Tpau_3646 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain Tpau_3650 PF00795 Carbon-nitrogen hydrolase Tpau_3652 PF00067 Cytochrome P450 Tpau_3653 PF01791 DeoC/LacD family aldolase Tpau_3654 PF01842 ACT domain Tpau_3654 PF00551 Formyl transferase Tpau_3655 PF00300 Histidine phosphatase superfamily (branch 1) Tpau_3655 PF00934 PE family Tpau_3656 PF00561 alpha/beta hydrolase fold Tpau_3659 PF01381 Helix-turn-helix Tpau_3660 PF04286 Protein of unknown function (DUF445) Tpau_3661 PF03976 Polyphosphate kinase 2 (PPK2) Tpau_3664 PF03466 LysR substrate binding domain Tpau_3664 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Tpau_3665 PF01209 ubiE/COQ5 methyltransferase family Tpau_3666 PF07992 Pyridine nucleotide-disulphide oxidoreductase Tpau_3667 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Tpau_3667 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Tpau_3668 PF00463 Isocitrate lyase family Tpau_3669 PF06114 IrrE N-terminal-like domain Tpau_3669 PF01381 Helix-turn-helix Tpau_3669 PF09856 Predicted transcriptional regulator (DUF2083) Tpau_3672 PF05721 Phytanoyl-CoA dioxygenase (PhyH) Tpau_3674 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Tpau_3674 PF07992 Pyridine nucleotide-disulphide oxidoreductase Tpau_3675 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain Tpau_3675 PF00326 Prolyl oligopeptidase family Tpau_3676 PF01910 Thiamine-binding protein Tpau_3681 PF03976 Polyphosphate kinase 2 (PPK2) Tpau_3683 PF00425 chorismate binding enzyme Tpau_3684 PF00857 Isochorismatase family Tpau_3684 PF00550 Phosphopantetheine attachment site Tpau_3685 PF00501 AMP-binding enzyme Tpau_3685 PF13193 AMP-binding enzyme C-terminal domain Tpau_3687 PF08021 Siderophore-interacting FAD-binding domain Tpau_3687 PF04954 Siderophore-interacting protein Tpau_3688 PF00005 ABC transporter Tpau_3688 PF00664 ABC transporter transmembrane region Tpau_3689 PF00664 ABC transporter transmembrane region Tpau_3689 PF00005 ABC transporter Tpau_3690 PF02911 Formyl transferase, C-terminal domain Tpau_3690 PF00551 Formyl transferase Tpau_3691 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) Tpau_3692 PF00550 Phosphopantetheine attachment site Tpau_3692 PF00857 Isochorismatase family Tpau_3693 PF00975 Thioesterase domain Tpau_3693 PF00668 Condensation domain Tpau_3693 PF13193 AMP-binding enzyme C-terminal domain Tpau_3693 PF00550 Phosphopantetheine attachment site Tpau_3693 PF00501 AMP-binding enzyme Tpau_3696 PF01497 Periplasmic binding protein Tpau_3697 PF00296 Luciferase-like monooxygenase Tpau_3701 PF00183 Hsp90 protein Tpau_3702 PF00118 TCP-1/cpn60 chaperonin family Tpau_3706 PF07687 Peptidase dimerisation domain Tpau_3706 PF01546 Peptidase family M20/M25/M40 Tpau_3707 PF03454 MoeA C-terminal region (domain IV) Tpau_3707 PF03453 MoeA N-terminal region (domain I and II) Tpau_3707 PF00994 Probable molybdopterin binding domain Tpau_3708 PF04226 Transglycosylase associated protein Tpau_3709 PF02666 Phosphatidylserine decarboxylase Tpau_3710 PF01066 CDP-alcohol phosphatidyltransferase Tpau_3711 PF17862 AAA+ lid domain Tpau_3711 PF00004 ATPase family associated with various cellular activities (AAA) Tpau_3711 PF01434 Peptidase family M41 Tpau_3714 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter Tpau_3714 PF13244 Domain of unknown function (DUF4040) Tpau_3714 PF00361 Proton-conducting membrane transporter Tpau_3714 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Tpau_3719 PF03334 Na+/H+ antiporter subunit Tpau_3720 PF00291 Pyridoxal-phosphate dependent enzyme Tpau_3725 PF00005 ABC transporter Tpau_3726 PF01032 FecCD transport family Tpau_3727 PF04107 Glutamate-cysteine ligase family 2(GCS2) Tpau_3728 PF00080 Copper/zinc superoxide dismutase (SODC) Tpau_3731 PF01327 Polypeptide deformylase Tpau_3732 PF00583 Acetyltransferase (GNAT) family Tpau_3735 PF00005 ABC transporter Tpau_3737 PF01964 Radical SAM ThiC family Tpau_3737 PF13667 ThiC-associated domain Tpau_3738 PF08543 Phosphomethylpyrimidine kinase Tpau_3739 PF08543 Phosphomethylpyrimidine kinase Tpau_3742 PF00005 ABC transporter Tpau_3743 PF13185 GAF domain Tpau_3743 PF00196 Bacterial regulatory proteins, luxR family Tpau_3744 PF07690 Major Facilitator Superfamily Tpau_3744 PF00083 Sugar (and other) transporter Tpau_3745 PF02720 Domain of unknown function (DUF222) Tpau_3746 PF05690 Thiazole biosynthesis protein ThiG Tpau_3748 PF01266 FAD dependent oxidoreductase Tpau_3748 PF05690 Thiazole biosynthesis protein ThiG Tpau_3749 PF02581 Thiamine monophosphate synthase Tpau_3750 PF01638 HxlR-like helix-turn-helix Tpau_3752 PF00293 NUDIX domain Tpau_3754 PF00497 Bacterial extracellular solute-binding proteins, family 3 Tpau_3755 PF00069 Protein kinase domain Tpau_3755 PF16919 Protein kinase G rubredoxin domain Tpau_3755 PF16918 Protein kinase G tetratricopeptide repeat Tpau_3756 PF00005 ABC transporter Tpau_3757 PF01032 FecCD transport family Tpau_3758 PF01032 FecCD transport family Tpau_3760 PF00672 HAMP domain Tpau_3760 PF00211 Adenylate and Guanylate cyclase catalytic domain Tpau_3761 PF00871 Acetokinase family Tpau_3762 PF07085 DRTGG domain Tpau_3762 PF01515 Phosphate acetyl/butaryl transferase Tpau_3763 PF00296 Luciferase-like monooxygenase Tpau_3765 PF00005 ABC transporter Tpau_3765 PF00664 ABC transporter transmembrane region Tpau_3769 PF07859 alpha/beta hydrolase fold Tpau_3770 PF00501 AMP-binding enzyme Tpau_3770 PF13193 AMP-binding enzyme C-terminal domain Tpau_3770 PF00668 Condensation domain Tpau_3770 PF00975 Thioesterase domain Tpau_3770 PF00550 Phosphopantetheine attachment site Tpau_3772 PF08281 Sigma-70, region 4 Tpau_3772 PF04542 Sigma-70 region 2 Tpau_3774 PF01032 FecCD transport family Tpau_3775 PF00005 ABC transporter Tpau_3776 PF00067 Cytochrome P450 Tpau_3778 PF00067 Cytochrome P450 Tpau_3779 PF00440 Bacterial regulatory proteins, tetR family Tpau_3781 PF01433 Peptidase family M1 domain Tpau_3786 PF08281 Sigma-70, region 4 Tpau_3786 PF04542 Sigma-70 region 2 Tpau_3787 PF16363 GDP-mannose 4,6 dehydratase Tpau_3788 PF17925 Tetracyclin repressor-like, C-terminal domain Tpau_3788 PF00440 Bacterial regulatory proteins, tetR family Tpau_3789 PF02405 Permease MlaE Tpau_3790 PF02405 Permease MlaE Tpau_3797 PF02770 Acyl-CoA dehydrogenase, middle domain Tpau_3797 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Tpau_3797 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Tpau_3798 PF01557 Fumarylacetoacetate (FAA) hydrolase family Tpau_3800 PF07836 DmpG-like communication domain Tpau_3800 PF00682 HMGL-like Tpau_3801 PF01118 Semialdehyde dehydrogenase, NAD binding domain Tpau_3801 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation Tpau_3802 PF09339 IclR helix-turn-helix domain Tpau_3802 PF01614 Bacterial transcriptional regulator Tpau_3806 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Tpau_3806 PF02770 Acyl-CoA dehydrogenase, middle domain Tpau_3806 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Tpau_3807 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Tpau_3807 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Tpau_3808 PF00732 GMC oxidoreductase Tpau_3808 PF05199 GMC oxidoreductase Tpau_3810 PF01068 ATP dependent DNA ligase domain Tpau_3810 PF04679 ATP dependent DNA ligase C terminal region Tpau_3810 PF04675 DNA ligase N terminus Tpau_3812 PF00296 Luciferase-like monooxygenase Tpau_3815 PF03060 Nitronate monooxygenase Tpau_3816 PF00378 Enoyl-CoA hydratase/isomerase Tpau_3821 PF00067 Cytochrome P450 Tpau_3822 PF02803 Thiolase, C-terminal domain Tpau_3822 PF00108 Thiolase, N-terminal domain Tpau_3823 PF01370 NAD dependent epimerase/dehydratase family Tpau_3824 PF00106 short chain dehydrogenase Tpau_3826 PF00378 Enoyl-CoA hydratase/isomerase Tpau_3826 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Tpau_3826 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Tpau_3827 PF01144 Coenzyme A transferase Tpau_3829 PF03060 Nitronate monooxygenase Tpau_3831 PF00486 Transcriptional regulatory protein, C terminal Tpau_3831 PF00072 Response regulator receiver domain Tpau_3832 PF00108 Thiolase, N-terminal domain Tpau_3832 PF02803 Thiolase, C-terminal domain Tpau_3833 PF17932 Tetracyclin repressor-like, C-terminal domain Tpau_3833 PF00440 Bacterial regulatory proteins, tetR family Tpau_3835 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Tpau_3835 PF02770 Acyl-CoA dehydrogenase, middle domain Tpau_3835 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Tpau_3836 PF13193 AMP-binding enzyme C-terminal domain Tpau_3836 PF00501 AMP-binding enzyme Tpau_3837 PF00378 Enoyl-CoA hydratase/isomerase Tpau_3838 PF02770 Acyl-CoA dehydrogenase, middle domain Tpau_3838 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Tpau_3838 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Tpau_3840 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Tpau_3840 PF02770 Acyl-CoA dehydrogenase, middle domain Tpau_3840 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Tpau_3841 PF04072 Leucine carboxyl methyltransferase Tpau_3842 PF01613 Flavin reductase like domain Tpau_3843 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Tpau_3844 PF12697 Alpha/beta hydrolase family Tpau_3845 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Tpau_3845 PF08028 Acyl-CoA dehydrogenase, C-terminal domain Tpau_3846 PF14537 Cytochrome c3 Tpau_3846 PF00890 FAD binding domain Tpau_3848 PF00890 FAD binding domain Tpau_3849 PF00355 Rieske [2Fe-2S] domain Tpau_3851 PF00970 Oxidoreductase FAD-binding domain Tpau_3851 PF00111 2Fe-2S iron-sulfur cluster binding domain Tpau_3851 PF00175 Oxidoreductase NAD-binding domain Tpau_3854 PF00296 Luciferase-like monooxygenase Tpau_3855 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Tpau_3855 PF02770 Acyl-CoA dehydrogenase, middle domain Tpau_3855 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Tpau_3856 PF13452 N-terminal half of MaoC dehydratase Tpau_3869 PF13556 PucR C-terminal helix-turn-helix domain Tpau_3869 PF07905 Purine catabolism regulatory protein-like family Tpau_3869 PF17853 GGDEF-like domain Tpau_3870 PF00743 Flavin-binding monooxygenase-like Tpau_3873 PF00069 Protein kinase domain Tpau_3874 PF09115 DNA polymerase III, delta subunit, C terminal Tpau_3875 PF00672 HAMP domain Tpau_3875 PF00211 Adenylate and Guanylate cyclase catalytic domain Tpau_3876 PF01131 DNA topoisomerase Tpau_3876 PF01751 Toprim domain Tpau_3876 PF13368 Topoisomerase C-terminal repeat Tpau_3879 PF13936 Helix-turn-helix domain Tpau_3879 PF00665 Integrase core domain Tpau_3880 PF00313 'Cold-shock' DNA-binding domain Tpau_3881 PF09369 Domain of unknown function (DUF1998) Tpau_3881 PF00270 DEAD/DEAH box helicase Tpau_3881 PF00271 Helicase conserved C-terminal domain Tpau_3904 PF00239 Resolvase, N terminal domain Tpau_3908 PF00437 Type II/IV secretion system protein Tpau_3912 PF00005 ABC transporter Tpau_3912 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Tpau_3913 PF12911 N-terminal TM domain of oligopeptide transport permease C Tpau_3913 PF00528 Binding-protein-dependent transport system inner membrane component Tpau_3914 PF00528 Binding-protein-dependent transport system inner membrane component Tpau_3915 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Tpau_3916 PF13193 AMP-binding enzyme C-terminal domain Tpau_3916 PF00501 AMP-binding enzyme Tpau_3916 PF16177 Acetyl-coenzyme A synthetase N-terminus Tpau_3919 PF00005 ABC transporter Tpau_3921 PF03167 Uracil DNA glycosylase superfamily Tpau_3923 PF00083 Sugar (and other) transporter Tpau_3923 PF07690 Major Facilitator Superfamily Tpau_3924 PF06965 Na+/H+ antiporter 1 Tpau_3926 PF00561 alpha/beta hydrolase fold Tpau_3926 PF08386 TAP-like protein Tpau_3927 PF02674 Colicin V production protein Tpau_3928 PF00293 NUDIX domain Tpau_3929 PF00085 Thioredoxin Tpau_3930 PF00633 Helix-hairpin-helix motif Tpau_3930 PF00730 HhH-GPD superfamily base excision DNA repair protein Tpau_3930 PF10576 Iron-sulfur binding domain of endonuclease III Tpau_3932 PF13545 Crp-like helix-turn-helix domain Tpau_3932 PF00027 Cyclic nucleotide-binding domain Tpau_3933 PF16123 Hydroxyacylglutathione hydrolase C-terminus Tpau_3933 PF00753 Metallo-beta-lactamase superfamily Tpau_3936 PF02374 Anion-transporting ATPase Tpau_3937 PF02374 Anion-transporting ATPase Tpau_3938 PF02467 Transcription factor WhiB Tpau_3939 PF00912 Transglycosylase Tpau_3939 PF00905 Penicillin binding protein transpeptidase domain Tpau_3941 PF00378 Enoyl-CoA hydratase/isomerase Tpau_3943 PF00440 Bacterial regulatory proteins, tetR family Tpau_3943 PF16859 Tetracyclin repressor-like, C-terminal domain Tpau_3944 PF03055 Retinal pigment epithelial membrane protein Tpau_3945 PF05362 Lon protease (S16) C-terminal proteolytic domain Tpau_3945 PF00004 ATPase family associated with various cellular activities (AAA) Tpau_3945 PF02190 ATP-dependent protease La (LON) substrate-binding domain Tpau_3947 PF00107 Zinc-binding dehydrogenase Tpau_3947 PF08240 Alcohol dehydrogenase GroES-like domain Tpau_3948 PF00202 Aminotransferase class-III Tpau_3949 PF02780 Transketolase, C-terminal domain Tpau_3949 PF02779 Transketolase, pyrimidine binding domain Tpau_3949 PF13292 1-deoxy-D-xylulose-5-phosphate synthase Tpau_3950 PF00456 Transketolase, thiamine diphosphate binding domain Tpau_3951 PF01037 Lrp/AsnC ligand binding domain Tpau_3951 PF13404 AsnC-type helix-turn-helix domain Tpau_3952 PF00171 Aldehyde dehydrogenase family Tpau_3959 PF00149 Calcineurin-like phosphoesterase Tpau_3960 PF09424 Yqey-like protein Tpau_3962 PF02537 CrcB-like protein, Camphor Resistance (CrcB) Tpau_3963 PF02537 CrcB-like protein, Camphor Resistance (CrcB) Tpau_3964 PF02566 OsmC-like protein Tpau_3965 PF01475 Ferric uptake regulator family Tpau_3966 PF00561 alpha/beta hydrolase fold Tpau_3968 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus Tpau_3969 PF13193 AMP-binding enzyme C-terminal domain Tpau_3969 PF00501 AMP-binding enzyme Tpau_3970 PF17853 GGDEF-like domain Tpau_3970 PF13556 PucR C-terminal helix-turn-helix domain Tpau_3971 PF03466 LysR substrate binding domain Tpau_3971 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Tpau_3973 PF00905 Penicillin binding protein transpeptidase domain Tpau_3975 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase Tpau_3978 PF00210 Ferritin-like domain Tpau_3979 PF08359 YsiA-like protein, C-terminal region Tpau_3979 PF00440 Bacterial regulatory proteins, tetR family Tpau_3981 PF02774 Semialdehyde dehydrogenase, dimerisation domain Tpau_3981 PF01118 Semialdehyde dehydrogenase, NAD binding domain Tpau_3982 PF01842 ACT domain Tpau_3982 PF00696 Amino acid kinase family Tpau_3982 PF13840 ACT domain Tpau_3985 PF03621 MbtH-like protein Tpau_3987 PF00501 AMP-binding enzyme Tpau_3987 PF13193 AMP-binding enzyme C-terminal domain Tpau_3987 PF00668 Condensation domain Tpau_3987 PF00550 Phosphopantetheine attachment site Tpau_3988 PF08502 LeuA allosteric (dimerisation) domain Tpau_3988 PF00682 HMGL-like Tpau_3989 PF00892 EamA-like transporter family Tpau_3990 PF00155 Aminotransferase class I and II Tpau_3991 PF00970 Oxidoreductase FAD-binding domain Tpau_3991 PF00175 Oxidoreductase NAD-binding domain Tpau_3991 PF00042 Globin Tpau_3994 PF00890 FAD binding domain Tpau_3997 PF00296 Luciferase-like monooxygenase Tpau_3998 PF00083 Sugar (and other) transporter Tpau_3998 PF07690 Major Facilitator Superfamily Tpau_3999 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Tpau_3999 PF03466 LysR substrate binding domain Tpau_4000 PF00892 EamA-like transporter family Tpau_4001 PF08241 Methyltransferase domain Tpau_4002 PF02875 Mur ligase family, glutamate ligase domain Tpau_4002 PF08245 Mur ligase middle domain Tpau_4004 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain Tpau_4004 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain Tpau_4008 PF13662 Toprim domain Tpau_4008 PF02132 RecR protein Tpau_4009 PF02575 YbaB/EbfC DNA-binding family Tpau_4010 PF01520 N-acetylmuramoyl-L-alanine amidase Tpau_4011 PF00849 RNA pseudouridylate synthase Tpau_4011 PF01479 S4 domain Tpau_4016 PF12169 DNA polymerase III subunits gamma and tau domain III Tpau_4018 PF00245 Alkaline phosphatase Tpau_4020 PF09594 Glycosyltransferase family 87 Tpau_4021 PF12897 Alanine-glyoxylate amino-transferase Tpau_4023 PF00561 alpha/beta hydrolase fold Tpau_4023 PF00364 Biotin-requiring enzyme Tpau_4026 PF12697 Alpha/beta hydrolase family Tpau_4030 PF00823 PPE family Tpau_4030 PF08237 PE-PPE domain Tpau_4032 PF01022 Bacterial regulatory protein, arsR family Tpau_4034 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Tpau_4034 PF00205 Thiamine pyrophosphate enzyme, central domain Tpau_4034 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Tpau_4035 PF01979 Amidohydrolase family Tpau_4036 PF00083 Sugar (and other) transporter Tpau_4036 PF07690 Major Facilitator Superfamily Tpau_4037 PF01037 Lrp/AsnC ligand binding domain Tpau_4038 PF04679 ATP dependent DNA ligase C terminal region Tpau_4038 PF01068 ATP dependent DNA ligase domain Tpau_4038 PF13298 DNA polymerase Ligase (LigD) Tpau_4039 PF01068 ATP dependent DNA ligase domain Tpau_4039 PF04679 ATP dependent DNA ligase C terminal region Tpau_4040 PF04978 Protein of unknown function (DUF664) Tpau_4042 PF00749 tRNA synthetases class I (E and Q), catalytic domain Tpau_4043 PF01965 DJ-1/PfpI family Tpau_4043 PF12833 Helix-turn-helix domain Tpau_4044 PF03176 MMPL family Tpau_4046 PF00797 N-acetyltransferase Tpau_4048 PF14437 MafB19-like deaminase Tpau_4050 PF02153 Prephenate dehydrogenase Tpau_4055 PF00665 Integrase core domain Tpau_4055 PF13936 Helix-turn-helix domain Tpau_4058 PF00171 Aldehyde dehydrogenase family Tpau_4060 PF02627 Carboxymuconolactone decarboxylase family Tpau_4064 PF04542 Sigma-70 region 2 Tpau_4064 PF08281 Sigma-70, region 4 Tpau_4065 PF03780 Asp23 family, cell envelope-related function Tpau_4071 PF04199 Putative cyclase Tpau_4075 PF00155 Aminotransferase class I and II Tpau_4079 PF01965 DJ-1/PfpI family Tpau_4079 PF12833 Helix-turn-helix domain Tpau_4084 PF13452 N-terminal half of MaoC dehydratase Tpau_4085 PF09995 Uncharacterized protein conserved in bacteria (DUF2236) Tpau_4088 PF13936 Helix-turn-helix domain Tpau_4088 PF00665 Integrase core domain Tpau_4094 PF08990 Erythronolide synthase docking Tpau_4094 PF00550 Phosphopantetheine attachment site Tpau_4094 PF14765 Polyketide synthase dehydratase Tpau_4094 PF09277 Erythronolide synthase, docking Tpau_4094 PF08240 Alcohol dehydrogenase GroES-like domain Tpau_4094 PF00698 Acyl transferase domain Tpau_4094 PF08659 KR domain Tpau_4094 PF00109 Beta-ketoacyl synthase, N-terminal domain Tpau_4094 PF02801 Beta-ketoacyl synthase, C-terminal domain Tpau_4094 PF16197 Ketoacyl-synthetase C-terminal extension Tpau_4098 PF00266 Aminotransferase class-V Tpau_4099 PF10759 Protein of unknown function (DUF2587) Tpau_4100 PF01061 ABC-2 type transporter Tpau_4101 PF00005 ABC transporter Tpau_4103 PF13193 AMP-binding enzyme C-terminal domain Tpau_4103 PF00501 AMP-binding enzyme Tpau_4106 PF04138 GtrA-like protein Tpau_4108 PF01381 Helix-turn-helix Tpau_4110 PF01380 SIS domain Tpau_4111 PF00171 Aldehyde dehydrogenase family Tpau_4112 PF00557 Metallopeptidase family M24 Tpau_4112 PF01321 Creatinase/Prolidase N-terminal domain Tpau_4113 PF00202 Aminotransferase class-III Tpau_4114 PF07687 Peptidase dimerisation domain Tpau_4114 PF01546 Peptidase family M20/M25/M40 Tpau_4116 PF00106 short chain dehydrogenase Tpau_4117 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Tpau_4117 PF02770 Acyl-CoA dehydrogenase, middle domain Tpau_4117 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Tpau_4118 PF00440 Bacterial regulatory proteins, tetR family Tpau_4118 PF17933 Tetracyclin repressor-like, C-terminal domain Tpau_4119 PF04030 D-arabinono-1,4-lactone oxidase Tpau_4119 PF01565 FAD binding domain Tpau_4120 PF00106 short chain dehydrogenase Tpau_4121 PF12249 Arabinofuranosyltransferase A C terminal Tpau_4121 PF12250 Arabinofuranosyltransferase N terminal Tpau_4122 PF00106 short chain dehydrogenase Tpau_4123 PF01497 Periplasmic binding protein Tpau_4127 PF01844 HNH endonuclease Tpau_4127 PF02720 Domain of unknown function (DUF222) Tpau_4130 PF00005 ABC transporter Tpau_4131 PF02632 BioY family Tpau_4132 PF13977 BetI-type transcriptional repressor, C-terminal Tpau_4132 PF00440 Bacterial regulatory proteins, tetR family Tpau_4133 PF01220 Dehydroquinase class II Tpau_4137 PF17689 Arabinosyltransferase concanavalin like domain Tpau_4137 PF04602 Mycobacterial cell wall arabinan synthesis protein Tpau_4137 PF14896 EmbC C-terminal domain Tpau_4138 PF04602 Mycobacterial cell wall arabinan synthesis protein Tpau_4138 PF17689 Arabinosyltransferase concanavalin like domain Tpau_4138 PF14896 EmbC C-terminal domain Tpau_4139 PF04602 Mycobacterial cell wall arabinan synthesis protein Tpau_4139 PF17689 Arabinosyltransferase concanavalin like domain Tpau_4139 PF14896 EmbC C-terminal domain Tpau_4140 PF00583 Acetyltransferase (GNAT) family Tpau_4141 PF00135 Carboxylesterase family Tpau_4142 PF02028 BCCT, betaine/carnitine/choline family transporter Tpau_4144 PF03405 Fatty acid desaturase Tpau_4145 PF00196 Bacterial regulatory proteins, luxR family Tpau_4145 PF00072 Response regulator receiver domain Tpau_4147 PF13185 GAF domain Tpau_4147 PF07730 Histidine kinase Tpau_4147 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tpau_4147 PF13492 GAF domain Tpau_4150 PF00528 Binding-protein-dependent transport system inner membrane component Tpau_4151 PF00005 ABC transporter Tpau_4151 PF00571 CBS domain Tpau_4152 PF00528 Binding-protein-dependent transport system inner membrane component Tpau_4155 PF03073 TspO/MBR family Tpau_4157 PF00011 Hsp20/alpha crystallin family Tpau_4161 PF00106 short chain dehydrogenase Tpau_4164 PF00772 DnaB-like helicase N terminal domain Tpau_4164 PF03796 DnaB-like helicase C terminal domain Tpau_4164 PF14528 LAGLIDADG-like domain Tpau_4164 PF00772 DnaB-like helicase N terminal domain Tpau_4164 PF03796 DnaB-like helicase C terminal domain Tpau_4164 PF14528 LAGLIDADG-like domain Tpau_4166 PF03948 Ribosomal protein L9, C-terminal domain Tpau_4166 PF01281 Ribosomal protein L9, N-terminal domain Tpau_4167 PF01084 Ribosomal protein S18 Tpau_4168 PF00436 Single-strand binding protein family Tpau_4169 PF01250 Ribosomal protein S6 Tpau_4171 PF02405 Permease MlaE Tpau_4180 PF09995 Uncharacterized protein conserved in bacteria (DUF2236) Tpau_4181 PF00501 AMP-binding enzyme Tpau_4181 PF13193 AMP-binding enzyme C-terminal domain Tpau_4182 PF02803 Thiolase, C-terminal domain Tpau_4182 PF00108 Thiolase, N-terminal domain Tpau_4183 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Tpau_4183 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Tpau_4183 PF00378 Enoyl-CoA hydratase/isomerase Tpau_4185 PF00378 Enoyl-CoA hydratase/isomerase Tpau_4186 PF03060 Nitronate monooxygenase Tpau_4187 PF00171 Aldehyde dehydrogenase family Tpau_4192 PF00912 Transglycosylase Tpau_4192 PF00905 Penicillin binding protein transpeptidase domain Tpau_4193 PF17249 Family of unknown function (DUF5318) Tpau_4195 PF01658 Myo-inositol-1-phosphate synthase Tpau_4197 PF03169 OPT oligopeptide transporter protein Tpau_4198 PF00296 Luciferase-like monooxygenase Tpau_4203 PF01047 MarR family Tpau_4204 PF07690 Major Facilitator Superfamily Tpau_4205 PF00106 short chain dehydrogenase Tpau_4206 PF00480 ROK family Tpau_4206 PF01047 MarR family Tpau_4207 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain Tpau_4207 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain Tpau_4208 PF00920 Dehydratase family Tpau_4209 PF01081 KDPG and KHG aldolase Tpau_4210 PF02653 Branched-chain amino acid transport system / permease component Tpau_4211 PF00005 ABC transporter Tpau_4212 PF13407 Periplasmic binding protein domain Tpau_4214 PF09334 tRNA synthetases class I (M) Tpau_4214 PF13603 Leucyl-tRNA synthetase, Domain 2 Tpau_4214 PF08264 Anticodon-binding domain of tRNA Tpau_4216 PF13593 SBF-like CPA transporter family (DUF4137) Tpau_4219 PF02622 Uncharacterized ACR, COG1678 Tpau_4220 PF07690 Major Facilitator Superfamily Tpau_4223 PF13735 tRNA nucleotidyltransferase domain 2 putative Tpau_4223 PF12627 Probable RNA and SrmB- binding site of polymerase A Tpau_4223 PF01743 Poly A polymerase head domain Tpau_4224 PF00293 NUDIX domain Tpau_4226 PF03023 Lipid II flippase MurJ Tpau_4228 PF13673 Acetyltransferase (GNAT) domain Tpau_4228 PF00117 Glutamine amidotransferase class-I Tpau_4228 PF00958 GMP synthase C terminal domain Tpau_4228 PF13302 Acetyltransferase (GNAT) domain Tpau_4228 PF03352 Methyladenine glycosylase Tpau_4229 PF00171 Aldehyde dehydrogenase family Tpau_4230 PF08281 Sigma-70, region 4 Tpau_4230 PF04542 Sigma-70 region 2 Tpau_4232 PF07992 Pyridine nucleotide-disulphide oxidoreductase Tpau_4233 PF00085 Thioredoxin Tpau_4234 PF01520 N-acetylmuramoyl-L-alanine amidase Tpau_4234 PF01471 Putative peptidoglycan binding domain Tpau_4236 PF02195 ParB-like nuclease domain Tpau_4236 PF17762 HTH domain found in ParB protein Tpau_4237 PF13614 AAA domain Tpau_4238 PF02527 rRNA small subunit methyltransferase G Tpau_4240 PF02096 60Kd inner membrane protein Tpau_4241 PF01809 Putative membrane protein insertion efficiency factor Tpau_4242 PF00825 Ribonuclease P Tpau_4243 PF00468 Ribosomal protein L34 Tpau_4253 PF03773 Predicted permease Tpau_4256 PF17841 BID domain of Bartonella effector protein (Bep) Tpau_4256 PF01443 Viral (Superfamily 1) RNA helicase Tpau_4256 PF03389 MobA/MobL family Tpau_4268 PF00872 Transposase, Mutator family Tpau_4273 PF01695 IstB-like ATP binding protein Tpau_4276 PF00872 Transposase, Mutator family Tpau_4284 PF00872 Transposase, Mutator family Tpau_4286 PF00872 Transposase, Mutator family Tpau_4287 PF00872 Transposase, Mutator family Tpau_4290 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Tpau_4292 PF00291 Pyridoxal-phosphate dependent enzyme Tpau_4295 PF13614 AAA domain Tpau_4300 PF02661 Fic/DOC family Tpau_4304 PF00872 Transposase, Mutator family Tpau_4306 PF00916 Sulfate permease family Tpau_4306 PF01740 STAS domain Tpau_4307 PF13411 MerR HTH family regulatory protein Tpau_4316 PF12857 TOBE-like domain Tpau_4316 PF00005 ABC transporter Tpau_4319 PF00501 AMP-binding enzyme Tpau_4319 PF13193 AMP-binding enzyme C-terminal domain Tpau_4319 PF00668 Condensation domain Tpau_4319 PF00550 Phosphopantetheine attachment site Tpau_4320 PF00975 Thioesterase domain Tpau_4320 PF00550 Phosphopantetheine attachment site Tpau_4320 PF00668 Condensation domain Tpau_4320 PF13193 AMP-binding enzyme C-terminal domain Tpau_4320 PF00501 AMP-binding enzyme Tpau_4321 PF08659 KR domain Tpau_4321 PF02801 Beta-ketoacyl synthase, C-terminal domain Tpau_4321 PF00109 Beta-ketoacyl synthase, N-terminal domain Tpau_4321 PF16197 Ketoacyl-synthetase C-terminal extension Tpau_4321 PF00698 Acyl transferase domain Tpau_4321 PF00550 Phosphopantetheine attachment site Tpau_4322 PF16197 Ketoacyl-synthetase C-terminal extension Tpau_4322 PF00109 Beta-ketoacyl synthase, N-terminal domain Tpau_4322 PF02801 Beta-ketoacyl synthase, C-terminal domain Tpau_4323 PF00550 Phosphopantetheine attachment site Tpau_4323 PF00668 Condensation domain Tpau_4323 PF00975 Thioesterase domain Tpau_4323 PF13193 AMP-binding enzyme C-terminal domain Tpau_4323 PF00501 AMP-binding enzyme Tpau_4325 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) Tpau_4326 PF00550 Phosphopantetheine attachment site Tpau_4326 PF00501 AMP-binding enzyme Tpau_4326 PF13193 AMP-binding enzyme C-terminal domain Tpau_4326 PF00668 Condensation domain Tpau_4326 PF00975 Thioesterase domain Tpau_4329 PF00005 ABC transporter Tpau_4330 PF00425 chorismate binding enzyme Tpau_4331 PF13193 AMP-binding enzyme C-terminal domain Tpau_4331 PF00501 AMP-binding enzyme Tpau_4335 PF00089 Trypsin