locus-tag	class	description
J0J70_00025	COG1739	Uncharacterized protein family UPF0029
J0J70_00090	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
J0J70_00120	COG1077	Cell shape determining protein MreB Mrl
J0J70_00130	COG2385	sporulation resulting in formation of a cellular spore
J0J70_00140	COG0355	proton-transporting ATP synthase activity, rotational mechanism
J0J70_00145	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
J0J70_00155	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
J0J70_00165	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
J0J70_00170	COG0636	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
J0J70_00190	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
J0J70_00195	COG0698	ribose 5-phosphate isomerase
J0J70_00210	COG0009	L-threonylcarbamoyladenylate synthase
J0J70_00215	COG2890	protein-(glutamine-N5) methyltransferase activity
J0J70_00220	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
J0J70_00225	COG0305	Participates in initiation and elongation during chromosome replication
J0J70_00230	COG0359	binds to the 23S rRNA
J0J70_00235	COG3887	signaling protein consisting of a modified GGDEF domain and a DHH domain
J0J70_00250	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
J0J70_00255	COG0629	single-stranded DNA binding
J0J70_00260	COG0360	Binds together with S18 to 16S ribosomal RNA
J0J70_00265	COG0012	GTP binding
J0J70_00275	COG1215	transferase activity, transferring glycosyl groups
J0J70_00285	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
J0J70_00290	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
J0J70_00295	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
J0J70_00300	COG0084	hydrolase, TatD family'
J0J70_00310	COG4608	Belongs to the ABC transporter superfamily
J0J70_00315	COG0444	Belongs to the ABC transporter superfamily
J0J70_00320	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
J0J70_00325	COG0601	transmembrane transport
J0J70_00330	COG4166	transmembrane transport
J0J70_00385	COG3547	Transposase (IS116 IS110 IS902 family)
J0J70_00390	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
J0J70_00395	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
J0J70_00405	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
J0J70_00410	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
J0J70_00415	COG1774	PSP1 C-terminal conserved region
J0J70_00420	COG0470	DNA polymerase III
J0J70_00425	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
J0J70_00440	COG0101	tRNA pseudouridine synthase activity
J0J70_00445	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
J0J70_00450	COG1122	ATPase activity
J0J70_00455	COG1122	ATPase activity
J0J70_00465	COG1132	(ABC) transporter
J0J70_00605	COG1837	Belongs to the UPF0109 family
J0J70_00610	COG0228	four-way junction DNA binding
J0J70_00615	COG4471	UPF0298 protein
J0J70_00635	COG0772	Belongs to the SEDS family
J0J70_00665	COG0242	peptide deformylase activity
J0J70_00675	COG0561	phosphatase activity
J0J70_00680	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
J0J70_00690	COG0569	domain protein
J0J70_00695	COG0569	domain protein
J0J70_00700	COG1496	oxidoreductase activity
J0J70_00730	COG0622	Phosphoesterase
J0J70_00740	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
J0J70_00760	COG2197	response regulator
J0J70_00765	COG0322	excinuclease ABC activity
J0J70_00775	COG1368	sulfuric ester hydrolase activity
J0J70_00780	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
J0J70_00785	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
J0J70_00795	COG2740	Nucleic-acid-binding protein implicated in transcription termination
J0J70_00800	COG0195	Participates in both transcription termination and antitermination
J0J70_00805	COG0779	Required for maturation of 30S ribosomal subunits
J0J70_00810	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
J0J70_00840	COG1454	alcohol dehydrogenase
J0J70_00840	COG1012	belongs to the aldehyde dehydrogenase family
J0J70_00850	COG1104	cysteine desulfurase activity
J0J70_00860	COG1956	GAF domain-containing protein
J0J70_00870	COG0583	DNA-binding transcription factor activity
J0J70_00885	COG1609	Transcriptional regulator
J0J70_00890	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
J0J70_00890	COG1605	Chorismate mutase
J0J70_00895	COG0072	phenylalanine-tRNA ligase activity
J0J70_00895	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
J0J70_00900	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
J0J70_00905	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
J0J70_00910	COG2384	SAM-dependent methyltransferase
J0J70_00915	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
J0J70_00920	COG0358	DNA primase activity
J0J70_00925	COG0423	glycine-tRNA ligase activity
J0J70_00930	COG1381	Involved in DNA repair and RecF pathway recombination
J0J70_00945	COG0295	cytidine deaminase activity
J0J70_00950	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
J0J70_00955	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
J0J70_00960	COG1702	phosphate starvation-inducible protein PhoH
J0J70_00975	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
J0J70_00980	COG0187	DNA topoisomerase II activity
J0J70_00985	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
J0J70_00995	COG3763	UPF0154 protein
J0J70_01005	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
J0J70_01025	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
J0J70_01030	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
J0J70_01035	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
J0J70_01040	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
J0J70_01050	COG4550	Control of competence regulator ComK, YlbF/YmcA
J0J70_01055	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
J0J70_01060	COG2359	stage V sporulation protein S
J0J70_01065	COG1692	metallophosphoesterase
J0J70_01080	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
J0J70_01095	COG3331	DNA recombination
J0J70_01100	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
J0J70_01100	COG4499	WXG100 protein secretion system (Wss), protein YukC
J0J70_01105	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
J0J70_01110	COG3935	DnaD domain protein
J0J70_01120	COG0617	tRNA 3'-terminal CCA addition
J0J70_01125	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
J0J70_01130	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
J0J70_01140	COG1595	DNA-templated transcription, initiation
J0J70_01145	COG2738	Putative neutral zinc metallopeptidase
J0J70_01150	COG0457	Tetratricopeptide repeat
J0J70_01155	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
J0J70_01160	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
J0J70_01170	COG0302	gtp cyclohydrolase
J0J70_01180	COG0297	glycogen (starch) synthase activity
J0J70_01185	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
J0J70_01210	COG3290	protein histidine kinase activity
J0J70_01240	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
J0J70_01245	COG3481	metal-dependent phosphohydrolase, HD sub domain
J0J70_01250	COG0635	Involved in the biosynthesis of porphyrin-containing compound
J0J70_01255	COG1523	belongs to the glycosyl hydrolase 13 family
J0J70_01260	COG2364	Membrane
J0J70_01265	COG0513	Belongs to the DEAD box helicase family
J0J70_01280	COG1621	beta-fructofuranosidase activity
J0J70_01285	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
J0J70_01290	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
J0J70_01290	COG1263	PTS System
J0J70_01295	COG1609	Transcriptional regulator
J0J70_01315	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
J0J70_01340	COG2078	PFAM AMMECR1 domain protein
J0J70_01340	COG3885	ferrous iron binding
J0J70_01345	COG2985	domain, Protein
J0J70_01360	COG1473	amidohydrolase
J0J70_01365	COG1464	Belongs to the NlpA lipoprotein family
J0J70_01375	COG2011	ABC-type metal ion transport system permease component
J0J70_01380	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
J0J70_01410	COG0210	DNA helicase
J0J70_01430	COG0242	peptide deformylase activity
J0J70_01440	COG4667	esterase of the alpha-beta hydrolase superfamily
J0J70_01460	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
J0J70_01465	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
J0J70_01470	COG2340	Cysteine-rich secretory protein family
J0J70_01475	COG1823	symporter activity
J0J70_01485	COG1592	Rubrerythrin
J0J70_01495	COG0613	PHP domain protein
J0J70_01515	COG1061	Type III restriction enzyme res subunit
J0J70_01520	COG0659	secondary active sulfate transmembrane transporter activity
J0J70_01535	COG1403	HNH endonuclease
J0J70_01565	COG0058	SHG alpha-glucan phosphorylase activity
J0J70_01570	COG0297	glycogen (starch) synthase activity
J0J70_01575	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
J0J70_01585	COG3377	Domain of unknown function (DUF1805)
J0J70_01590	COG2905	signal-transduction protein containing cAMP-binding and CBS domains
J0J70_01600	COG0719	Fe-S assembly protein
J0J70_01605	COG0822	iron-sulfur transferase activity
J0J70_01610	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
J0J70_01615	COG0719	Fe-S assembly protein
J0J70_01620	COG0396	ATPase activity
J0J70_01625	COG1283	sodium-dependent phosphate transmembrane transporter activity
J0J70_01640	COG0006	proline dipeptidase activity
J0J70_01655	COG1811	Na channel or pump
J0J70_01665	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
J0J70_01670	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
J0J70_01695	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
J0J70_01700	COG4468	UDPglucose--hexose-1-phosphate uridylyltransferase
J0J70_01705	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
J0J70_01710	COG1609	Transcriptional regulator
J0J70_01725	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
J0J70_01735	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
J0J70_01740	COG3250	beta-galactosidase activity
J0J70_01745	COG0024	Methionine aminopeptidase
J0J70_01750	COG0297	glycogen (starch) synthase activity
J0J70_01755	COG2211	Major facilitator Superfamily
J0J70_01765	COG0395	ABC-type sugar transport system, permease component
J0J70_01770	COG1175	transmembrane transport
J0J70_01780	COG2207	Transcriptional regulator
J0J70_01785	COG0534	Mate efflux family protein
J0J70_01790	COG2207	Transcriptional regulator
J0J70_01810	COG0393	Putative heavy-metal-binding
J0J70_01815	COG3620	sequence-specific DNA binding
J0J70_01820	COG0583	DNA-binding transcription factor activity
J0J70_01825	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
J0J70_01830	COG1136	(ABC) transporter
J0J70_01835	COG0577	efflux transmembrane transporter activity
J0J70_01845	COG1011	Hydrolase
J0J70_01865	COG1192	Involved in chromosome partitioning
J0J70_01870	COG3263	regulation of cellular component size
J0J70_01955	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
J0J70_01975	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
J0J70_01980	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
J0J70_01985	COG3833	ABC-type maltose transport systems, permease component
J0J70_01990	COG1175	transmembrane transport
J0J70_02085	COG2309	aminopeptidase activity
J0J70_02090	COG3557	Belongs to the UPF0374 family
J0J70_02095	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
J0J70_02100	COG1393	Belongs to the ArsC family
J0J70_02120	COG0037	tRNA processing
J0J70_02125	COG2323	membrane
J0J70_02130	COG0826	peptidase U32
J0J70_02135	COG1316	TRANSCRIPTIONal
J0J70_02140	COG2723	6-phospho-beta-galactosidase activity
J0J70_02145	COG1263	PTS System
J0J70_02145	COG2190	(PTS) system
J0J70_02145	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
J0J70_02150	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
J0J70_02150	COG2190	(PTS) system
J0J70_02150	COG1263	PTS System
J0J70_02155	COG3711	transcriptional antiterminator
J0J70_02160	COG3711	transcriptional antiterminator
J0J70_02165	COG1533	DNA photolyase activity
J0J70_02170	COG0745	RESPONSE REGULATOR receiver
J0J70_02175	COG5002	protein histidine kinase activity
J0J70_02205	COG0070	glutamate synthase
J0J70_02205	COG0067	glutamate synthase
J0J70_02205	COG0069	glutamate synthase activity
J0J70_02230	COG0583	DNA-binding transcription factor activity
J0J70_02375	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
J0J70_02475	COG0768	penicillin binding
J0J70_02480	COG2723	6-phospho-beta-galactosidase activity
J0J70_02495	COG1473	amidohydrolase
J0J70_02500	COG2378	regulation of single-species biofilm formation
J0J70_02525	COG0640	Transcriptional regulator
J0J70_02545	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
J0J70_02550	COG2171	N-acyltransferase activity
J0J70_02565	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
J0J70_02570	COG1473	amidohydrolase
J0J70_02580	COG0019	diaminopimelate decarboxylase activity
J0J70_02605	COG4807	Protein conserved in bacteria
J0J70_02610	COG3328	transposase activity
J0J70_02625	COG1187	pseudouridine synthase activity
J0J70_02640	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
J0J70_02655	COG0456	acetyltransferase
J0J70_02660	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
J0J70_02665	COG1705	Flagellar rod assembly protein muramidase FlgJ
J0J70_02695	COG1136	(ABC) transporter
J0J70_02715	COG2818	Glycosylase
J0J70_02720	COG2207	Transcriptional regulator
J0J70_02725	COG2364	Membrane
J0J70_02745	COG0748	coenzyme F420 binding
J0J70_02760	COG1120	ATPase activity
J0J70_02765	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
J0J70_02775	COG1348	The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex which has 2 components the iron protein and the molybdenum-iron protein
J0J70_02790	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
J0J70_02800	COG0748	coenzyme F420 binding
J0J70_02810	COG2033	superoxide reductase activity
J0J70_02815	COG0534	Mate efflux family protein
J0J70_02820	COG0277	FAD linked oxidase domain protein
J0J70_02825	COG2207	Transcriptional regulator
J0J70_02835	COG0561	phosphatase activity
J0J70_02840	COG1501	Belongs to the glycosyl hydrolase 31 family
J0J70_02870	COG1234	tRNA 3'-trailer cleavage
J0J70_02915	COG0590	tRNA wobble adenosine to inosine editing
J0J70_02925	COG0534	Mate efflux family protein
J0J70_02950	COG2217	Heavy metal translocating P-type atpase
J0J70_02955	COG2217	Heavy metal translocating P-type atpase
J0J70_02960	COG1937	Protein conserved in bacteria
J0J70_02980	COG3300	MHYT domain
J0J70_02980	COG5001	Diguanylate cyclase
J0J70_03000	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
J0J70_03005	COG5002	protein histidine kinase activity
J0J70_03015	COG2217	Heavy metal translocating P-type atpase
J0J70_03030	COG0628	permease
J0J70_03055	COG1876	peptidase activity
J0J70_03060	COG2268	Band 7 protein
J0J70_03065	COG3681	Belongs to the UPF0597 family
J0J70_03070	COG1272	protein, Hemolysin III
J0J70_03085	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
J0J70_03090	COG0311	Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
J0J70_03100	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
J0J70_03105	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
J0J70_03110	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
J0J70_03115	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
J0J70_03120	COG1653	transport
J0J70_03125	COG0395	ABC-type sugar transport system, permease component
J0J70_03130	COG1175	transmembrane transport
J0J70_03140	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
J0J70_03145	COG1116	anion transmembrane transporter activity
J0J70_03150	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
J0J70_03160	COG1696	Membrane protein involved in D-alanine export
J0J70_03180	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
J0J70_03185	COG2843	Capsule synthesis protein
J0J70_03190	COG0557	exoribonuclease II activity
J0J70_03200	COG0530	calcium, potassium:sodium antiporter activity
J0J70_03205	COG0628	permease
J0J70_03210	COG0148	phosphopyruvate hydratase activity
J0J70_03225	COG1481	regulation of sporulation
J0J70_03230	COG0391	Required for morphogenesis under gluconeogenic growth conditions
J0J70_03255	COG0546	phosphoglycolate phosphatase activity
J0J70_03270	COG1950	PFAM Membrane protein of
J0J70_03275	COG3583	domain protein
J0J70_03280	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
J0J70_03285	COG0784	Response regulator, receiver
J0J70_03285	COG2205	protein histidine kinase activity
J0J70_03295	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
J0J70_03300	COG0210	DNA helicase
J0J70_03305	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
J0J70_03320	COG5263	repeat protein
J0J70_03320	COG4193	domain, Protein
J0J70_03330	COG1597	lipid kinase activity
J0J70_03335	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
J0J70_03345	COG4536	flavin adenine dinucleotide binding
J0J70_03350	COG0739	heme binding
J0J70_03355	COG0366	Alpha amylase catalytic
J0J70_03370	COG2188	Transcriptional regulator
J0J70_03375	COG2137	regulation of response to DNA damage stimulus
J0J70_03380	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
J0J70_03385	COG0860	N-Acetylmuramoyl-L-alanine amidase
J0J70_03385	COG4991	sh3 domain protein
J0J70_03385	COG3103	Sh3 type 3 domain protein
J0J70_03390	COG0436	Aminotransferase
J0J70_03395	COG5002	protein histidine kinase activity
J0J70_03400	COG0745	RESPONSE REGULATOR receiver
J0J70_03405	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
J0J70_03410	COG2155	Conserved Protein
J0J70_03415	COG0736	holo-[acyl-carrier-protein] synthase activity
J0J70_03420	COG0459	protein refolding
J0J70_03425	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
J0J70_03440	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
J0J70_03450	COG2344	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
J0J70_03455	COG0488	(ABC) transporter
J0J70_03475	COG1214	PFAM Peptidase M22, glycoprotease
J0J70_03480	COG0802	atpase or kinase
J0J70_03565	COG0739	heme binding
J0J70_03570	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
J0J70_03575	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
J0J70_03580	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
J0J70_03590	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
J0J70_03605	COG0825	malonyl-CoA metabolic process
J0J70_03610	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
J0J70_03615	COG0439	Biotin carboxylase
J0J70_03625	COG2070	2-Nitropropane dioxygenase
J0J70_03640	COG0110	maltose O-acetyltransferase activity
J0J70_03670	COG0110	maltose O-acetyltransferase activity
J0J70_03675	COG0628	permease
J0J70_03685	COG1288	antiporter activity
J0J70_03700	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
J0J70_03725	COG1114	Component of the transport system for branched-chain amino acids
J0J70_03730	COG1328	CTP reductase activity
J0J70_03735	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
J0J70_03745	COG0351	phosphomethylpyrimidine kinase
J0J70_03750	COG0351	phosphomethylpyrimidine kinase
J0J70_03760	COG2207	Transcriptional regulator
J0J70_03770	COG3620	sequence-specific DNA binding
J0J70_03780	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
J0J70_03785	COG1428	Deoxynucleoside kinase
J0J70_03790	COG1881	PFAM PEBP family protein
J0J70_03800	COG4604	ABC transporter, ATP-binding protein
J0J70_03815	COG2188	Transcriptional regulator
J0J70_03820	COG0366	Alpha amylase catalytic
J0J70_03825	COG1263	PTS System
J0J70_03825	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
J0J70_03830	COG1472	Belongs to the glycosyl hydrolase 3 family
J0J70_03840	COG0667	Aldo Keto reductase
J0J70_03845	COG4894	glucomannan catabolic process
J0J70_03850	COG0778	Nitroreductase
J0J70_03855	COG2801	Transposase and inactivated derivatives
J0J70_03885	COG1525	nuclease
J0J70_03890	COG1752	Esterase of the alpha-beta hydrolase superfamily
J0J70_03900	COG4106	trans-aconitate 2-methyltransferase activity
J0J70_03910	COG1686	Belongs to the peptidase S11 family
J0J70_03915	COG1846	Transcriptional regulator
J0J70_03920	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
J0J70_03925	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
J0J70_03945	COG2183	response to ionizing radiation
J0J70_03950	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
J0J70_03955	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
J0J70_03960	COG0561	phosphatase activity
J0J70_03975	COG3859	Proton-coupled thiamine transporter YuaJ
J0J70_03990	COG2065	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
J0J70_04010	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
J0J70_04015	COG2188	Transcriptional regulator
J0J70_04020	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
J0J70_04035	COG0149	triose-phosphate isomerase activity
J0J70_04045	COG1546	Belongs to the CinA family
J0J70_04045	COG1058	Belongs to the CinA family
J0J70_04065	COG1181	Belongs to the D-alanine--D-alanine ligase family
J0J70_04075	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
J0J70_04080	COG2267	carboxylic ester hydrolase activity
J0J70_04110	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
J0J70_04115	COG2608	mercury ion transmembrane transporter activity
J0J70_04120	COG0534	Mate efflux family protein
J0J70_04125	COG1846	Transcriptional regulator
J0J70_04130	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
J0J70_04135	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
J0J70_04145	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
J0J70_04160	COG0202	RNA polymerase activity
J0J70_04165	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
J0J70_04175	COG0257	Belongs to the bacterial ribosomal protein bL36 family
J0J70_04185	COG0024	Methionine aminopeptidase
J0J70_04190	COG0563	adenylate kinase activity
J0J70_04195	COG0201	protein transport
J0J70_04210	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
J0J70_04215	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
J0J70_04225	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
J0J70_04230	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
J0J70_04260	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
J0J70_04265	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
J0J70_04270	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
J0J70_04275	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
J0J70_04280	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
J0J70_04285	COG0089	rRNA binding
J0J70_04290	COG0088	Forms part of the polypeptide exit tunnel
J0J70_04300	COG0051	transcription antitermination factor activity, RNA binding
J0J70_04305	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
J0J70_04310	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
J0J70_04315	COG0049	tRNA binding
J0J70_04320	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
J0J70_04325	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
J0J70_04330	COG0085	RNA polymerase activity
J0J70_04335	COG2813	Specifically methylates the guanine in position
J0J70_04340	COG0222	ribosome binding
J0J70_04345	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
J0J70_04350	COG0081	regulation of translation
J0J70_04355	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
J0J70_04365	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
J0J70_04370	COG0267	Belongs to the bacterial ribosomal protein bL33 family
J0J70_04380	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
J0J70_04385	COG1939	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
J0J70_04390	COG0215	cysteine-tRNA ligase activity
J0J70_04395	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
J0J70_04400	COG0251	oxidation-reduction process
J0J70_04420	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
J0J70_04450	COG1494	fructose-1,6-bisphosphatase
J0J70_04460	COG0475	glutathione-regulated potassium exporter activity
J0J70_04475	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
J0J70_04480	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
J0J70_04490	COG1595	DNA-templated transcription, initiation
J0J70_04500	COG3706	GGDEF domain
J0J70_04500	COG4251	negative regulation of phosphorylation
J0J70_04500	COG5001	Diguanylate cyclase
J0J70_04500	COG2203	Gaf domain
J0J70_04515	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
J0J70_04520	COG0366	Alpha amylase catalytic
J0J70_04530	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
J0J70_04545	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
J0J70_04550	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
J0J70_04560	COG1592	Rubrerythrin
J0J70_04565	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
J0J70_04570	COG2770	Histidine kinase
J0J70_04570	COG2205	protein histidine kinase activity
J0J70_04575	COG0745	RESPONSE REGULATOR receiver
J0J70_04595	COG2509	5-formyltetrahydrofolate cyclo-ligase activity
J0J70_04600	COG3706	GGDEF domain
J0J70_04605	COG0504	CTP synthase activity
J0J70_04755	COG0018	arginyl-trna synthetase
J0J70_04765	COG1523	belongs to the glycosyl hydrolase 13 family
J0J70_04775	COG0017	Asparaginyl-tRNA synthetase
J0J70_04790	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
J0J70_04810	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
J0J70_04815	COG0592	DNA-directed DNA polymerase activity
J0J70_04820	COG1668	transmembrane transport
J0J70_04825	COG4152	abc transporter atp-binding protein
J0J70_04830	COG0445	tRNA wobble uridine modification
J0J70_04850	COG1192	Involved in chromosome partitioning
J0J70_04855	COG1475	DNA binding
J0J70_04860	COG0668	transmembrane transport
J0J70_04865	COG4481	Protein conserved in bacteria
J0J70_04870	COG2501	S4 domain
J0J70_04875	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
J0J70_04880	COG0187	DNA topoisomerase II activity
J0J70_04885	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
J0J70_04890	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
J0J70_04895	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
J0J70_04920	COG0786	glutamate:sodium symporter activity
J0J70_04925	COG1357	PFAM Pentapeptide repeats (8 copies)
J0J70_04950	COG2824	Alkylphosphonate utilization operon protein PhnA
J0J70_04955	COG3270	Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA
J0J70_04955	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
J0J70_04965	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
J0J70_04970	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
J0J70_04980	COG0395	ABC-type sugar transport system, permease component
J0J70_04995	COG0584	glycerophosphoryl diester phosphodiesterase
J0J70_05000	COG3842	ATPase activity
J0J70_05005	COG0588	phosphoglycerate mutase activity
J0J70_05045	COG4978	Transcriptional regulator
J0J70_05045	COG0789	Transcriptional regulator
J0J70_05055	COG1114	Component of the transport system for branched-chain amino acids
J0J70_05060	COG1408	metallophosphoesterase
J0J70_05090	COG3620	sequence-specific DNA binding
J0J70_05100	COG2610	gluconate transmembrane transporter activity
J0J70_05105	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
J0J70_05115	COG1741	Belongs to the pirin family
J0J70_05120	COG0860	N-Acetylmuramoyl-L-alanine amidase
J0J70_05120	COG2247	cell wall binding repeat
J0J70_05130	COG0860	N-Acetylmuramoyl-L-alanine amidase
J0J70_05130	COG2247	cell wall binding repeat
J0J70_05140	COG1876	peptidase activity
J0J70_05150	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
J0J70_05155	COG1397	ADP-ribosylglycohydrolase
J0J70_05165	COG1408	metallophosphoesterase
J0J70_05175	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
J0J70_05185	COG1979	alcohol dehydrogenase
J0J70_05200	COG1131	(ABC) transporter
J0J70_05215	COG0217	transcriptional regulatory protein
J0J70_05220	COG3478	Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082)
J0J70_05230	COG0393	Putative heavy-metal-binding
J0J70_05240	COG1266	CAAX protease self-immunity
J0J70_05270	COG0488	(ABC) transporter
J0J70_05275	COG0513	Belongs to the DEAD box helicase family
J0J70_05280	COG0659	secondary active sulfate transmembrane transporter activity
J0J70_05285	COG3546	catalase activity
J0J70_05300	COG3546	catalase activity
J0J70_05340	COG1115	amino acid carrier protein
J0J70_05350	COG1464	Belongs to the NlpA lipoprotein family
J0J70_05355	COG2011	ABC-type metal ion transport system permease component
J0J70_05360	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
J0J70_05370	COG1882	Formate acetyltransferase
J0J70_05375	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
J0J70_05380	COG1592	Rubrerythrin
J0J70_05385	COG1592	Rubrerythrin
J0J70_05390	COG0561	phosphatase activity
J0J70_05395	COG0142	geranyltranstransferase activity
J0J70_05405	COG0537	adenosine 5'-monophosphoramidase activity
J0J70_05420	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
J0J70_05430	COG3773	Cell wall hydrolase
J0J70_05435	COG0280	phosphate acetyltransferase
J0J70_05440	COG4844	belongs to the
J0J70_05450	COG1078	dGTPase activity
J0J70_05455	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
J0J70_05460	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
J0J70_05470	COG4466	Protein conserved in bacteria
J0J70_05475	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
J0J70_05480	COG2088	sporulation resulting in formation of a cellular spore
J0J70_05485	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
J0J70_05490	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
J0J70_05495	COG0193	aminoacyl-tRNA hydrolase activity
J0J70_05500	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
J0J70_05505	COG2002	toxin-antitoxin pair type II binding
J0J70_05510	COG0516	GMP reductase activity
J0J70_05510	COG0517	IMP dehydrogenase activity
J0J70_05520	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
J0J70_05525	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
J0J70_05535	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
J0J70_05540	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
J0J70_05545	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
J0J70_05550	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
J0J70_05560	COG0151	Belongs to the GarS family
J0J70_05565	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
J0J70_05605	COG5002	protein histidine kinase activity
J0J70_05605	COG3850	Histidine kinase
J0J70_05635	COG3314	Sporulation integral membrane protein YlbJ
J0J70_05640	COG1846	Transcriptional regulator
J0J70_05670	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
J0J70_05675	COG2244	polysaccharide biosynthetic process
J0J70_05680	COG3956	TIGRFAM MazG family protein
J0J70_05685	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
J0J70_05690	COG1575	Belongs to the MenA family. Type 1 subfamily
J0J70_05720	COG1098	S1 RNA binding domain
J0J70_05725	COG0534	Mate efflux family protein
J0J70_05740	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
J0J70_05745	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
J0J70_05760	COG4372	Transposase
J0J70_05765	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
J0J70_05785	COG1917	Cupin 2, conserved barrel domain protein
J0J70_05785	COG4977	sequence-specific DNA binding
J0J70_05790	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
J0J70_05795	COG4605	iron ion homeostasis
J0J70_05800	COG4604	ABC transporter, ATP-binding protein
J0J70_05805	COG4607	ABC-type enterochelin transport system periplasmic component
J0J70_05830	COG4464	protein tyrosine phosphatase activity
J0J70_05865	COG1210	Utp--glucose-1-phosphate uridylyltransferase
J0J70_05885	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
J0J70_05890	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
J0J70_05895	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
J0J70_05915	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
J0J70_05920	COG1363	Peptidase, m42
J0J70_05935	COG2252	PERMEase
J0J70_05945	COG1012	belongs to the aldehyde dehydrogenase family
J0J70_05945	COG1454	alcohol dehydrogenase
J0J70_05965	COG4372	Transposase
J0J70_05980	COG0426	domain, Protein
J0J70_05990	COG0706	membrane insertase activity
J0J70_05995	COG0706	membrane insertase activity
J0J70_06015	COG1418	mRNA catabolic process
J0J70_06025	COG0540	Belongs to the ATCase OTCase family
J0J70_06030	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
J0J70_06035	COG0505	Belongs to the CarA family
J0J70_06055	COG0284	orotidine-5'-phosphate decarboxylase activity
J0J70_06070	COG0174	glutamine synthetase
J0J70_06075	COG0622	Phosphoesterase
J0J70_06085	COG0281	malic enzyme
J0J70_06100	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
J0J70_06115	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
J0J70_06120	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
J0J70_06125	COG0163	prenyltransferase activity
J0J70_06130	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
J0J70_06150	COG0789	Transcriptional regulator
J0J70_06155	COG5001	Diguanylate cyclase
J0J70_06155	COG3300	MHYT domain
J0J70_06160	COG1473	amidohydrolase
J0J70_06165	COG1619	proteins homologs of microcin C7 resistance protein MccF
J0J70_06170	COG1435	thymidine kinase activity
J0J70_06205	COG0590	tRNA wobble adenosine to inosine editing
J0J70_06215	COG0745	RESPONSE REGULATOR receiver
J0J70_06220	COG5002	protein histidine kinase activity
J0J70_06230	COG0573	inorganic phosphate transmembrane transporter activity
J0J70_06235	COG0581	inorganic phosphate transmembrane transporter activity
J0J70_06240	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
J0J70_06255	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
J0J70_06260	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
J0J70_06265	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
J0J70_06275	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
J0J70_06315	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
J0J70_06320	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
J0J70_06330	COG0181	hydroxymethylbilane synthase activity
J0J70_06340	COG0113	porphobilinogen synthase activity
J0J70_06345	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
J0J70_06345	COG1648	precorrin-2 dehydrogenase activity
J0J70_06350	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
J0J70_06355	COG0765	amino acid transport
J0J70_06360	COG1126	abc transporter atp-binding protein
J0J70_06375	COG2207	Transcriptional regulator
J0J70_06375	COG4753	response regulator
J0J70_06395	COG0110	maltose O-acetyltransferase activity
J0J70_06405	COG1846	Transcriptional regulator
J0J70_06410	COG0386	Belongs to the glutathione peroxidase family
J0J70_06425	COG0596	Alpha beta hydrolase
J0J70_06445	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
J0J70_06475	COG2723	6-phospho-beta-galactosidase activity
J0J70_06480	COG1447	Phosphotransferase system cellobiose-specific component IIA
J0J70_06515	COG3715	PTS system
J0J70_06520	COG3716	PTS system mannose fructose sorbose family IID component
J0J70_06560	COG1486	melibiose metabolic process
J0J70_06565	COG4086	secreted protein
J0J70_06580	COG2720	vancomycin resistance protein
J0J70_06590	COG1929	Belongs to the glycerate kinase type-1 family
J0J70_06600	COG4260	virion core protein, lumpy skin disease virus
J0J70_06610	COG1842	Phage shock protein A
J0J70_06625	COG2244	polysaccharide biosynthetic process
J0J70_06640	COG1187	pseudouridine synthase activity
J0J70_06645	COG0613	PHP domain protein
J0J70_06655	COG1986	Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives. Probably excludes non-canonical purines from DNA precursor pool, thus preventing their incorporation into DNA and avoiding chromosomal lesions
J0J70_06665	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
J0J70_06670	COG1674	ftsk spoiiie
J0J70_06675	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
J0J70_06710	COG0489	protein tyrosine kinase activity
J0J70_06715	COG1323	Belongs to the UPF0348 family
J0J70_06720	COG1399	metal-binding, possibly nucleic acid-binding protein
J0J70_06725	COG0333	Belongs to the bacterial ribosomal protein bL32 family
J0J70_06770	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
J0J70_06775	COG0513	Belongs to the DEAD box helicase family
J0J70_06780	COG0648	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
J0J70_06790	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
J0J70_06795	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
J0J70_06800	COG0768	penicillin binding
J0J70_06805	COG0267	Belongs to the bacterial ribosomal protein bL33 family
J0J70_06815	COG1940	carbohydrate kinase activity
J0J70_06820	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
J0J70_06825	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
J0J70_06850	COG4537	Required for transformation and DNA binding
J0J70_06855	COG1459	type II secretion system
J0J70_06860	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
J0J70_06885	COG2509	5-formyltetrahydrofolate cyclo-ligase activity
J0J70_06905	COG0640	Transcriptional regulator
J0J70_06930	COG2333	competence protein COMEC
J0J70_06930	COG0658	competence protein
J0J70_06935	COG4166	transmembrane transport
J0J70_06940	COG0488	(ABC) transporter
J0J70_06955	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
J0J70_06955	COG1199	ATP-dependent helicase activity
J0J70_06965	COG1132	(ABC) transporter
J0J70_06970	COG1132	(ABC) transporter
J0J70_06975	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
J0J70_06980	COG2195	Cleaves the N-terminal amino acid of tripeptides
J0J70_06990	COG0564	pseudouridine synthase activity
J0J70_07020	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
J0J70_07040	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
J0J70_07085	COG0312	modulator of DNA gyrase
J0J70_07100	COG4988	ABC transporter
J0J70_07105	COG1132	(ABC) transporter
J0J70_07115	COG2832	Protein of unknown function (DUF454)
J0J70_07145	COG0243	molybdopterin cofactor binding
J0J70_07165	COG1058	Belongs to the CinA family
J0J70_07165	COG1546	Belongs to the CinA family
J0J70_07170	COG0303	'Molybdopterin
J0J70_07185	COG3842	ATPase activity
J0J70_07190	COG0746	molybdenum cofactor guanylyltransferase activity
J0J70_07210	COG0521	Mo-molybdopterin cofactor biosynthetic process
J0J70_07230	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
J0J70_07235	COG3022	response to hydroperoxide
J0J70_07260	COG1263	PTS System
J0J70_07260	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
J0J70_07260	COG2190	(PTS) system
J0J70_07285	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
J0J70_07320	COG4372	Transposase
J0J70_07375	COG2801	Transposase and inactivated derivatives
J0J70_07395	COG1619	proteins homologs of microcin C7 resistance protein MccF
J0J70_07415	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
J0J70_07415	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
J0J70_07420	COG1268	BioY protein
J0J70_07445	COG1705	Flagellar rod assembly protein muramidase FlgJ
J0J70_07490	COG1136	(ABC) transporter
J0J70_07490	COG0577	efflux transmembrane transporter activity
J0J70_07510	COG0584	glycerophosphoryl diester phosphodiesterase
J0J70_07530	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
J0J70_07540	COG1349	DNA-binding transcription factor activity
J0J70_07545	COG1105	Belongs to the carbohydrate kinase PfkB family
J0J70_07550	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
J0J70_07550	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
J0J70_07550	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
J0J70_07585	COG0708	Exodeoxyribonuclease III
J0J70_07590	COG5002	protein histidine kinase activity
J0J70_07595	COG0745	RESPONSE REGULATOR receiver
J0J70_07635	COG0640	Transcriptional regulator
J0J70_07640	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
J0J70_07645	COG0534	Mate efflux family protein
J0J70_07675	COG0720	synthase
J0J70_07680	COG0602	queuosine metabolic process
J0J70_07685	COG0302	gtp cyclohydrolase
J0J70_07690	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
J0J70_07695	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
J0J70_07700	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
J0J70_07710	COG1621	beta-fructofuranosidase activity
J0J70_07715	COG1803	Methylglyoxal synthase
J0J70_07725	COG0671	phosphoesterase, PA-phosphatase related
J0J70_07740	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
J0J70_07755	COG4166	transmembrane transport
J0J70_07760	COG0601	transmembrane transport
J0J70_07765	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
J0J70_07770	COG0444	Belongs to the ABC transporter superfamily
J0J70_07800	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
J0J70_07815	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
J0J70_07820	COG1570	exodeoxyribonuclease VII activity
J0J70_07830	COG0142	geranyltranstransferase activity
J0J70_07835	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
J0J70_07840	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
J0J70_07845	COG0497	DNA recombination
J0J70_07850	COG0750	zinc metalloprotease
J0J70_07855	COG0745	RESPONSE REGULATOR receiver
J0J70_07860	COG1649	PFAM Uncharacterised BCR, COG1649
J0J70_07870	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
J0J70_07885	COG0735	belongs to the Fur family
J0J70_07890	COG4974	Belongs to the 'phage' integrase family
J0J70_07900	COG1827	regulation of RNA biosynthetic process
J0J70_07935	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
J0J70_07940	COG0366	Alpha amylase catalytic
J0J70_07945	COG1263	PTS System
J0J70_07945	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
J0J70_07945	COG2190	(PTS) system
J0J70_08000	COG4372	Transposase
J0J70_08015	COG0366	Alpha amylase catalytic
J0J70_08045	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
J0J70_08050	COG3326	Membrane
J0J70_08065	COG2827	Endonuclease containing a URI domain
J0J70_08075	COG0534	Mate efflux family protein
J0J70_08085	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
J0J70_08095	COG0737	Belongs to the 5'-nucleotidase family
J0J70_08120	COG1757	Na H antiporter
J0J70_08155	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
J0J70_08175	COG1115	amino acid carrier protein
J0J70_08185	COG1307	EDD domain protein, DegV family
J0J70_08190	COG1671	Belongs to the UPF0178 family
J0J70_08195	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
J0J70_08200	COG4129	membrane
J0J70_08215	COG1550	Protein conserved in bacteria
J0J70_08220	COG0628	permease
J0J70_08230	COG0534	Mate efflux family protein
J0J70_08235	COG1522	sequence-specific DNA binding
J0J70_08240	COG0436	Aminotransferase
J0J70_08255	COG0596	Alpha beta hydrolase
J0J70_08260	COG1523	belongs to the glycosyl hydrolase 13 family
J0J70_08265	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
J0J70_08275	COG4377	Putative membrane peptidase family (DUF2324)
J0J70_08280	COG0640	Transcriptional regulator
J0J70_08290	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
J0J70_08325	COG0180	Tryptophanyl-tRNA synthetase
J0J70_08340	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
J0J70_08350	COG0473	3-isopropylmalate dehydrogenase activity
J0J70_08400	COG0629	single-stranded DNA binding
J0J70_08420	COG0789	Transcriptional regulator
J0J70_08425	COG0656	L-ascorbic acid biosynthetic process
J0J70_08440	COG2364	Membrane
J0J70_08445	COG2153	protein acetylation
J0J70_08450	COG1846	Transcriptional regulator
J0J70_08455	COG3328	transposase activity
J0J70_08505	COG0561	phosphatase activity
J0J70_08510	COG2267	carboxylic ester hydrolase activity
J0J70_08595	COG1061	Type III restriction enzyme res subunit
J0J70_08610	COG1401	restriction endodeoxyribonuclease activity
J0J70_08650	COG0534	Mate efflux family protein
J0J70_08675	COG1331	Highly conserved protein containing a thioredoxin domain
J0J70_08690	COG1028	Short-chain dehydrogenase reductase Sdr
J0J70_08695	COG0367	asparagine synthase
J0J70_08700	COG3863	Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family
J0J70_08710	COG0252	asparaginase activity
J0J70_08720	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
J0J70_08725	COG4120	Belongs to the binding-protein-dependent transport system permease family
J0J70_08750	COG0723	plastoquinol--plastocyanin reductase activity
J0J70_08750	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
J0J70_08770	COG0733	neurotransmitter:sodium symporter activity
J0J70_08790	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
J0J70_08795	COG0010	Belongs to the arginase family
J0J70_08800	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
J0J70_08805	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
J0J70_08810	COG1982	Orn Lys Arg decarboxylase major
J0J70_08815	COG3706	GGDEF domain
J0J70_08835	COG4974	Belongs to the 'phage' integrase family
J0J70_08845	COG1523	belongs to the glycosyl hydrolase 13 family
J0J70_08865	COG0438	transferase activity, transferring glycosyl groups
J0J70_08870	COG0463	Glycosyl transferase, family 2
J0J70_08875	COG0438	transferase activity, transferring glycosyl groups
J0J70_08885	COG1028	Short-chain dehydrogenase reductase Sdr
J0J70_08895	COG0800	Aldolase
J0J70_08920	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
J0J70_08930	COG4720	Psort location CytoplasmicMembrane, score
J0J70_08935	COG2081	HI0933 family
J0J70_08960	COG1177	transmembrane transport
J0J70_08965	COG1176	ABC-type spermidine putrescine transport system, permease component I
J0J70_08970	COG3842	ATPase activity
J0J70_08980	COG1217	gtp-binding protein TYPA
J0J70_08985	COG1466	dna polymerase III delta subunit
J0J70_08990	COG2333	competence protein COMEC
J0J70_08990	COG0658	competence protein
J0J70_08995	COG1555	photosystem II stabilization
J0J70_08995	COG1596	polysaccharide export
J0J70_09005	COG2226	methyltransferase
J0J70_09010	COG0799	negative regulation of ribosome biogenesis
J0J70_09015	COG1713	HD superfamily hydrolase involved in NAD metabolism
J0J70_09020	COG1534	Rna-binding protein
J0J70_09025	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
J0J70_09030	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
J0J70_09040	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
J0J70_09040	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
J0J70_09045	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
J0J70_09050	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
J0J70_09055	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
J0J70_09060	COG0572	uridine kinase
J0J70_09070	COG0826	peptidase U32
J0J70_09075	COG0826	peptidase U32
J0J70_09080	COG4122	O-methyltransferase activity
J0J70_09085	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
J0J70_09090	COG3906	Belongs to the UPF0473 family
J0J70_09105	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
J0J70_09115	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
J0J70_09120	COG0482	sulfurtransferase activity
J0J70_09125	COG1079	Belongs to the binding-protein-dependent transport system permease family
J0J70_09130	COG4603	Belongs to the binding-protein-dependent transport system permease family
J0J70_09135	COG3845	ABC transporter
J0J70_09140	COG1744	ABC transporter substrate-binding protein PnrA-like
J0J70_09145	COG1744	ABC transporter substrate-binding protein PnrA-like
J0J70_09150	COG1744	ABC transporter substrate-binding protein PnrA-like
J0J70_09155	COG1280	lysine exporter protein (LysE YggA)
J0J70_09155	COG1674	ftsk spoiiie
J0J70_09160	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
J0J70_09165	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
J0J70_09170	COG0527	aspartate kinase activity
J0J70_09175	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
J0J70_09180	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
J0J70_09185	COG0726	polysaccharide deacetylase
J0J70_09195	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
J0J70_09200	COG0196	riboflavin kinase activity
J0J70_09210	COG0635	Involved in the biosynthesis of porphyrin-containing compound
J0J70_09220	COG0481	GTPase activity
J0J70_09235	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
J0J70_09245	COG2195	Cleaves the N-terminal amino acid of tripeptides
J0J70_09250	COG1983	PspC domain protein
J0J70_09260	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
J0J70_09265	COG0268	Binds directly to 16S ribosomal RNA
J0J70_09300	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
J0J70_09305	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
J0J70_09310	COG1610	YqeY-like protein
J0J70_09325	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
J0J70_09330	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
J0J70_09335	COG1385	rRNA (uridine-N3-)-methyltransferase activity
J0J70_09340	COG2264	protein methyltransferase activity
J0J70_09345	COG0484	heat shock protein binding
J0J70_09350	COG0443	Heat shock 70 kDa protein
J0J70_09355	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
J0J70_09360	COG1420	regulation of RNA biosynthetic process
J0J70_09370	COG1126	abc transporter atp-binding protein
J0J70_09375	COG0765	amino acid transport
J0J70_09385	COG1193	negative regulation of DNA recombination
J0J70_09390	COG1039	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
J0J70_09400	COG0564	pseudouridine synthase activity
J0J70_09405	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
J0J70_09440	COG0762	integral membrane protein
J0J70_09445	COG1799	cell septum assembly
J0J70_09450	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
J0J70_09455	COG1873	PFAM PRC-barrel domain
J0J70_09460	COG1191	sigma factor activity
J0J70_09465	COG1191	sigma factor activity
J0J70_09475	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
J0J70_09495	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
J0J70_09500	COG0772	Belongs to the SEDS family
J0J70_09505	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
J0J70_09510	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
J0J70_09515	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
J0J70_09520	COG0768	penicillin binding
J0J70_09525	COG0768	penicillin binding
J0J70_09535	COG0275	rRNA processing
J0J70_09540	COG0218	Necessary for normal cell division and for the maintenance of normal septation
J0J70_09550	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
J0J70_09555	COG0544	peptidyl-prolyl cis-trans isomerase activity
J0J70_09595	COG1247	-acetyltransferase
J0J70_09625	COG0210	DNA helicase
J0J70_09645	COG0673	inositol 2-dehydrogenase activity
J0J70_09650	COG1114	Component of the transport system for branched-chain amino acids
J0J70_09665	COG0475	glutathione-regulated potassium exporter activity
J0J70_09685	COG1227	inorganic diphosphatase activity
J0J70_09690	COG1164	Oligoendopeptidase f
J0J70_09695	COG2271	Major facilitator Superfamily
J0J70_09700	COG2267	carboxylic ester hydrolase activity
J0J70_09710	COG2176	DNA-directed DNA polymerase activity
J0J70_09715	COG0442	prolyl-tRNA aminoacylation
J0J70_09720	COG0750	zinc metalloprotease
J0J70_09730	COG4589	Belongs to the CDS family
J0J70_09735	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
J0J70_09760	COG0233	cytoplasmic translational termination
J0J70_09765	COG0528	UMP kinase activity
J0J70_09770	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
J0J70_09775	COG0052	Belongs to the universal ribosomal protein uS2 family
J0J70_09785	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
J0J70_09790	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
J0J70_09810	COG4974	Belongs to the 'phage' integrase family
J0J70_09815	COG1206	Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
J0J70_09820	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
J0J70_09825	COG0758	DNA mediated transformation
J0J70_09830	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
J0J70_09850	COG0335	large ribosomal subunit rRNA binding
J0J70_09860	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
J0J70_09890	COG0742	ribosomal rna small subunit methyltransferase
J0J70_09905	COG1785	Belongs to the alkaline phosphatase family
J0J70_09910	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
J0J70_09915	COG2739	Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
J0J70_09920	COG0552	protein localization to endoplasmic reticulum
J0J70_09925	COG1196	nuclear chromosome segregation
J0J70_09930	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
J0J70_09950	COG1012	belongs to the aldehyde dehydrogenase family
J0J70_09965	COG0577	efflux transmembrane transporter activity
J0J70_09975	COG1136	(ABC) transporter
J0J70_09980	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
J0J70_10015	COG1115	amino acid carrier protein
J0J70_10045	COG1285	pathogenesis
J0J70_10065	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
J0J70_10070	COG0732	type I restriction modification DNA specificity domain
J0J70_10075	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
J0J70_10095	COG1401	restriction endodeoxyribonuclease activity
J0J70_10115	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
J0J70_10115	COG2190	(PTS) system
J0J70_10115	COG1263	PTS System
J0J70_10120	COG3547	Transposase (IS116 IS110 IS902 family)
J0J70_10215	COG1595	DNA-templated transcription, initiation
J0J70_10235	COG2039	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
J0J70_10250	COG0419	ATPase involved in DNA repair
J0J70_10255	COG0420	3'-5' exonuclease activity
J0J70_10260	COG1609	Transcriptional regulator
J0J70_10275	COG0406	alpha-ribazole phosphatase activity
J0J70_10300	COG4221	oxidoreductase activity
J0J70_10315	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
J0J70_10320	COG1461	Dihydroxyacetone kinase
J0J70_10325	COG1302	Protein conserved in bacteria
J0J70_10330	COG0227	Belongs to the bacterial ribosomal protein bL28 family
J0J70_10360	COG1564	THIamine pyrophosphokinase
J0J70_10365	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
J0J70_10370	COG1162	GTPase activity
J0J70_10375	COG0515	serine threonine protein kinase
J0J70_10375	COG2815	serine threonine protein kinase
J0J70_10380	COG0631	protein serine/threonine phosphatase activity
J0J70_10390	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
J0J70_10390	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
J0J70_10395	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
J0J70_10405	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
J0J70_10410	COG2996	Protein conserved in bacteria
J0J70_10425	COG0426	domain, Protein
J0J70_10430	COG0346	lactoylglutathione lyase activity
J0J70_10435	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
J0J70_10445	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
J0J70_10450	COG1758	RNA polymerase activity
J0J70_10455	COG0194	GDP metabolic process
J0J70_10460	COG1293	RNA-binding protein homologous to eukaryotic snRNP
J0J70_10465	COG2720	vancomycin resistance protein
J0J70_10475	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
J0J70_10490	COG1905	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
J0J70_10495	COG1876	peptidase activity
J0J70_10515	COG0772	Belongs to the SEDS family
J0J70_10520	COG1074	ATP-dependent DNA helicase activity
J0J70_10535	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
J0J70_10550	COG1160	GTP binding
J0J70_10555	COG0539	negative regulation of cytoplasmic translation
J0J70_10555	COG2183	response to ionizing radiation
J0J70_10570	COG1141	Ferredoxin
J0J70_10575	COG1187	pseudouridine synthase activity
J0J70_10580	COG0700	Nucleoside recognition
J0J70_10585	COG2715	membrane protein required for spore maturation
J0J70_10590	COG1686	Belongs to the peptidase S11 family
J0J70_10600	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
J0J70_10610	COG0697	spore germination
J0J70_10620	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
J0J70_10635	COG2172	sigma factor antagonist activity
J0J70_10645	COG1686	Belongs to the peptidase S11 family
J0J70_10685	COG2136	Putative SAM-dependent methyltransferase
J0J70_10685	COG2521	methyltransferase
J0J70_10690	COG0629	single-stranded DNA binding
J0J70_10695	COG0612	Peptidase, M16
J0J70_10700	COG0612	Peptidase, M16
J0J70_10710	COG2826	transposase and inactivated derivatives, IS30 family
J0J70_10715	COG0813	purine-nucleoside phosphorylase activity
J0J70_10720	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
J0J70_10725	COG0628	permease
J0J70_10740	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
J0J70_10795	COG4372	Transposase
J0J70_10815	COG1216	Glycosyl transferase, family 2
J0J70_10825	COG0438	transferase activity, transferring glycosyl groups
J0J70_10830	COG1442	glycosyl transferase family 8
J0J70_10830	COG1216	Glycosyl transferase, family 2
J0J70_10835	COG1216	Glycosyl transferase, family 2
J0J70_10835	COG1442	glycosyl transferase family 8
J0J70_10845	COG1316	TRANSCRIPTIONal
J0J70_10855	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
J0J70_10860	COG0124	histidyl-tRNA synthetase
J0J70_10870	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
J0J70_10875	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
J0J70_10880	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
J0J70_10880	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
J0J70_10885	COG2244	polysaccharide biosynthetic process
J0J70_10890	COG2323	membrane
J0J70_10900	COG1862	Preprotein translocase
J0J70_10905	COG0343	queuine tRNA-ribosyltransferase activity
J0J70_10910	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
J0J70_10915	COG2255	four-way junction helicase activity
J0J70_10925	COG0632	four-way junction helicase activity
J0J70_10930	COG2116	formate transmembrane transporter activity
J0J70_10945	COG0628	permease
J0J70_10970	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
J0J70_10975	COG1621	beta-fructofuranosidase activity
J0J70_10980	COG1263	PTS System
J0J70_10980	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
J0J70_10985	COG1609	Transcriptional regulator
J0J70_10995	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
J0J70_11000	COG0826	peptidase U32
J0J70_11005	COG0653	protein targeting
J0J70_11045	COG4989	oxidoreductase activity
J0J70_11075	COG0733	neurotransmitter:sodium symporter activity
J0J70_11080	COG3621	Patatin-like phospholipase
J0J70_11115	COG1112	Superfamily I DNA and RNA helicases and helicase subunits
J0J70_11125	COG0446	pyridine nucleotide-disulphide oxidoreductase
J0J70_11185	COG0671	phosphoesterase, PA-phosphatase related
J0J70_11205	COG0116	Belongs to the methyltransferase superfamily
J0J70_11230	COG4677	pectinesterase activity
J0J70_11245	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
J0J70_11255	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
J0J70_11260	COG0211	Belongs to the bacterial ribosomal protein bL27 family
J0J70_11270	COG0261	This protein binds to 23S rRNA in the presence of protein L20
J0J70_11280	COG1994	Peptidase M50
J0J70_11310	COG0367	asparagine synthase
J0J70_11320	COG2003	Belongs to the UPF0758 family
J0J70_11330	COG0285	dihydrofolate synthase activity
J0J70_11355	COG1363	Peptidase, m42
J0J70_11360	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
J0J70_11365	COG0291	Belongs to the bacterial ribosomal protein bL35 family
J0J70_11370	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
J0J70_11380	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
J0J70_11385	COG1484	DNA-dependent DNA replication
J0J70_11390	COG3611	Membrane attachment protein
J0J70_11400	COG0237	dephospho-CoA kinase activity
J0J70_11405	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
J0J70_11420	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
J0J70_11420	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
J0J70_11425	COG1408	metallophosphoesterase
J0J70_11440	COG2084	Dehydrogenase
J0J70_11460	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
J0J70_11470	COG1263	PTS System
J0J70_11470	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
J0J70_11470	COG2190	(PTS) system
J0J70_11475	COG1263	PTS System
J0J70_11475	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
J0J70_11475	COG2190	(PTS) system
J0J70_11480	COG0142	geranyltranstransferase activity
J0J70_11485	COG1252	NADH dehydrogenase
J0J70_11505	COG1051	belongs to the nudix hydrolase family
J0J70_11515	COG0205	6-phosphofructokinase activity
J0J70_11520	COG0587	DNA-directed DNA polymerase activity
J0J70_11525	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
J0J70_11530	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
J0J70_11535	COG0827	DNA restriction-modification system
J0J70_11540	COG3874	Sporulation protein YtfJ
J0J70_11550	COG0367	asparagine synthase
J0J70_11555	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
J0J70_11560	COG2860	membrane
J0J70_11565	COG0488	(ABC) transporter
J0J70_11570	COG1362	aminopeptidase activity
J0J70_11645	COG0860	N-Acetylmuramoyl-L-alanine amidase
J0J70_11645	COG1388	LysM domain
J0J70_11650	COG1045	serine acetyltransferase
J0J70_11670	COG1098	S1 RNA binding domain
J0J70_11675	COG0492	ferredoxin-NADP+ reductase activity
J0J70_11680	COG1963	PFAM Acid phosphatase vanadium-dependent haloperoxidase related
J0J70_11685	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
J0J70_11695	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
J0J70_11705	COG0561	phosphatase activity
J0J70_11710	COG0647	UMP catabolic process
J0J70_11715	COG4470	Protein conserved in bacteria
J0J70_11730	COG0534	Mate efflux family protein
J0J70_11735	COG1609	Transcriptional regulator
J0J70_11740	COG3842	ATPase activity
J0J70_11745	COG2508	Transcriptional regulator
J0J70_11755	COG0564	pseudouridine synthase activity
J0J70_11760	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
J0J70_11765	COG2357	RelA SpoT domain protein
J0J70_11785	COG1393	Belongs to the ArsC family
J0J70_11795	COG4608	Belongs to the ABC transporter superfamily
J0J70_11800	COG0444	Belongs to the ABC transporter superfamily
J0J70_11805	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
J0J70_11810	COG0601	transmembrane transport
J0J70_11815	COG4166	transmembrane transport
J0J70_11825	COG1132	(ABC) transporter
J0J70_11830	COG1132	(ABC) transporter
J0J70_11840	COG0542	response to heat
J0J70_11845	COG0561	phosphatase activity
J0J70_11865	COG0495	leucyl-tRNA aminoacylation
J0J70_11870	COG1242	4 iron, 4 sulfur cluster binding
J0J70_11875	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
J0J70_11895	COG0589	response to stress
J0J70_11900	COG0149	triose-phosphate isomerase activity
J0J70_11905	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
J0J70_11910	COG4191	Histidine kinase
J0J70_11910	COG0784	Response regulator, receiver
J0J70_11920	COG0534	Mate efflux family protein
J0J70_11930	COG2267	carboxylic ester hydrolase activity
J0J70_11955	COG2814	Major facilitator Superfamily
J0J70_11960	COG1120	ATPase activity
J0J70_11965	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
J0J70_11970	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
J0J70_11995	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
J0J70_12000	COG1757	Na H antiporter
J0J70_12020	COG0531	amino acid
J0J70_12030	COG0697	spore germination
J0J70_12035	COG0038	chloride channel
J0J70_12065	COG2199	diguanylate cyclase activity
J0J70_12070	COG4943	cyclic-guanylate-specific phosphodiesterase activity
J0J70_12075	COG4943	cyclic-guanylate-specific phosphodiesterase activity
J0J70_12095	COG4372	Transposase
J0J70_12150	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
J0J70_12155	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
J0J70_12160	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
J0J70_12165	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
J0J70_12175	COG0438	transferase activity, transferring glycosyl groups
J0J70_12195	COG0438	transferase activity, transferring glycosyl groups
J0J70_12200	COG0438	transferase activity, transferring glycosyl groups
J0J70_12225	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
J0J70_12235	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
J0J70_12245	COG0489	protein tyrosine kinase activity
J0J70_12250	COG3944	biosynthesis protein
J0J70_12270	COG1210	Utp--glucose-1-phosphate uridylyltransferase
J0J70_12275	COG1316	TRANSCRIPTIONal
J0J70_12305	COG3328	transposase activity
J0J70_12325	COG4372	Transposase
J0J70_12355	COG0438	transferase activity, transferring glycosyl groups
J0J70_12360	COG0438	transferase activity, transferring glycosyl groups
J0J70_12380	COG1215	transferase activity, transferring glycosyl groups
J0J70_12395	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
J0J70_12400	COG0489	protein tyrosine kinase activity
J0J70_12420	COG4750	Nucleotidyl transferase
J0J70_12425	COG0697	spore germination
J0J70_12435	COG0463	Glycosyl transferase, family 2
J0J70_12450	COG1045	serine acetyltransferase
J0J70_12465	COG2089	acid synthase
J0J70_12470	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
J0J70_12490	COG3475	LICD family
J0J70_12495	COG1216	Glycosyl transferase, family 2
J0J70_12505	COG1216	Glycosyl transferase, family 2
J0J70_12510	COG4193	domain, Protein
J0J70_12510	COG5263	repeat protein
J0J70_12540	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
J0J70_12545	COG0586	Pfam SNARE associated Golgi protein
J0J70_12560	COG1028	Short-chain dehydrogenase reductase Sdr
J0J70_12565	COG1388	LysM domain
J0J70_12565	COG3942	CHAP domain
J0J70_12600	COG0602	queuosine metabolic process
J0J70_12605	COG1328	CTP reductase activity
J0J70_12630	COG1108	ABC-type Mn2 Zn2 transport systems permease components
J0J70_12635	COG1121	(ABC) transporter
J0J70_12640	COG0803	Belongs to the bacterial solute-binding protein 9 family
J0J70_12655	COG1737	Transcriptional regulator
J0J70_12660	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
J0J70_12680	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
J0J70_12685	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
J0J70_12715	COG3344	reverse transcriptase
J0J70_12725	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
J0J70_12765	COG1874	Beta-galactosidase
J0J70_12780	COG1388	LysM domain
J0J70_12780	COG3409	Peptidoglycan-binding domain 1 protein
J0J70_12780	COG5632	N-Acetylmuramoyl-L-alanine amidase
J0J70_12785	COG1253	flavin adenine dinucleotide binding
J0J70_12800	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
J0J70_12820	COG0402	S-adenosylhomocysteine deaminase activity
J0J70_12825	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
J0J70_12835	COG3842	ATPase activity
J0J70_12845	COG1176	ABC-type spermidine putrescine transport system, permease component I
J0J70_12850	COG2985	domain, Protein
J0J70_12855	COG0584	glycerophosphoryl diester phosphodiesterase
J0J70_12860	COG1959	2 iron, 2 sulfur cluster binding
J0J70_12900	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
J0J70_12925	COG1408	metallophosphoesterase
J0J70_12945	COG1307	EDD domain protein, DegV family
J0J70_12960	COG1126	abc transporter atp-binding protein
J0J70_12965	COG4215	(ABC) transporter
J0J70_12970	COG0765	amino acid transport
J0J70_12985	COG0500	methyltransferase
J0J70_13005	COG1760	l-serine dehydratase
J0J70_13010	COG0556	nucleotide-excision repair
J0J70_13015	COG0793	Belongs to the peptidase S41A family
J0J70_13015	COG3409	Peptidoglycan-binding domain 1 protein
J0J70_13030	COG2177	Part of the ABC transporter FtsEX involved in
J0J70_13035	COG2884	Cell division ATP-binding protein ftsE
J0J70_13040	COG1854	S-ribosylhomocysteine lyase activity
J0J70_13045	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
J0J70_13070	COG1105	Belongs to the carbohydrate kinase PfkB family