locus-tag	class	description
AT726_00010	COG0800	Aldolase
AT726_00050	COG2081	HI0933 family
AT726_00085	COG0463	Glycosyl transferase, family 2
AT726_00085	COG0457	Tetratricopeptide repeat
AT726_00095	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
AT726_00100	COG1177	transmembrane transport
AT726_00105	COG1176	ABC-type spermidine putrescine transport system, permease component I
AT726_00110	COG3842	ATPase activity
AT726_00125	COG1466	dna polymerase III delta subunit
AT726_00130	COG2333	competence protein COMEC
AT726_00130	COG0658	competence protein
AT726_00135	COG1596	polysaccharide export
AT726_00135	COG1555	photosystem II stabilization
AT726_00140	COG2226	methyltransferase
AT726_00145	COG0799	negative regulation of ribosome biogenesis
AT726_00150	COG1713	HD superfamily hydrolase involved in NAD metabolism
AT726_00155	COG1534	Rna-binding protein
AT726_00160	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
AT726_00165	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
AT726_00170	COG1191	sigma factor activity
AT726_00175	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
AT726_00175	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
AT726_00180	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
AT726_00185	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
AT726_00190	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
AT726_00195	COG0572	uridine kinase
AT726_00215	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
AT726_00220	COG3906	Belongs to the UPF0473 family
AT726_00235	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
AT726_00240	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
AT726_00245	COG0482	sulfurtransferase activity
AT726_00265	COG1744	ABC transporter substrate-binding protein PnrA-like
AT726_00270	COG1744	ABC transporter substrate-binding protein PnrA-like
AT726_00275	COG1744	ABC transporter substrate-binding protein PnrA-like
AT726_00280	COG1674	ftsk spoiiie
AT726_00280	COG1280	lysine exporter protein (LysE YggA)
AT726_00285	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
AT726_00290	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
AT726_00295	COG0527	aspartate kinase activity
AT726_00300	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
AT726_00305	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
AT726_00310	COG0726	polysaccharide deacetylase
AT726_00320	COG1943	Transposase
AT726_00325	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
AT726_00330	COG0196	riboflavin kinase activity
AT726_00340	COG0635	Involved in the biosynthesis of porphyrin-containing compound
AT726_00350	COG0481	GTPase activity
AT726_00365	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
AT726_00375	COG2195	Cleaves the N-terminal amino acid of tripeptides
AT726_00390	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
AT726_00395	COG0268	Binds directly to 16S ribosomal RNA
AT726_00430	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
AT726_00435	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
AT726_00440	COG1610	YqeY-like protein
AT726_00455	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
AT726_00460	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
AT726_00465	COG1385	rRNA (uridine-N3-)-methyltransferase activity
AT726_00470	COG2264	protein methyltransferase activity
AT726_00475	COG0484	heat shock protein binding
AT726_00480	COG0443	Heat shock 70 kDa protein
AT726_00485	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
AT726_00490	COG1420	regulation of RNA biosynthetic process
AT726_00505	COG0765	amino acid transport
AT726_00515	COG1193	negative regulation of DNA recombination
AT726_00525	COG0705	Rhomboid family
AT726_00525	COG0457	Tetratricopeptide repeat
AT726_00530	COG0564	pseudouridine synthase activity
AT726_00535	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
AT726_00540	COG3328	transposase activity
AT726_00570	COG0762	integral membrane protein
AT726_00575	COG1799	cell septum assembly
AT726_00580	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
AT726_00585	COG1873	PFAM PRC-barrel domain
AT726_00590	COG1191	sigma factor activity
AT726_00595	COG1191	sigma factor activity
AT726_00605	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
AT726_00620	COG0812	UDP-N-acetylmuramate dehydrogenase activity
AT726_00625	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
AT726_00630	COG0772	Belongs to the SEDS family
AT726_00635	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
AT726_00640	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
AT726_00645	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
AT726_00650	COG0768	penicillin binding
AT726_00665	COG0275	rRNA processing
AT726_00670	COG0218	Necessary for normal cell division and for the maintenance of normal septation
AT726_00680	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
AT726_00685	COG0544	peptidyl-prolyl cis-trans isomerase activity
AT726_00720	COG1247	-acetyltransferase
AT726_00760	COG0210	DNA helicase
AT726_00775	COG0673	inositol 2-dehydrogenase activity
AT726_00780	COG1114	Component of the transport system for branched-chain amino acids
AT726_00795	COG0475	glutathione-regulated potassium exporter activity
AT726_00815	COG1227	inorganic diphosphatase activity
AT726_00820	COG1164	Oligoendopeptidase f
AT726_00825	COG2271	Major facilitator Superfamily
AT726_00835	COG2267	carboxylic ester hydrolase activity
AT726_00845	COG2176	DNA-directed DNA polymerase activity
AT726_00850	COG0442	prolyl-tRNA aminoacylation
AT726_00855	COG0750	zinc metalloprotease
AT726_00865	COG4589	Belongs to the CDS family
AT726_00870	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
AT726_00885	COG0233	cytoplasmic translational termination
AT726_00890	COG0528	UMP kinase activity
AT726_00895	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
AT726_00900	COG0052	Belongs to the universal ribosomal protein uS2 family
AT726_00910	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
AT726_00915	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
AT726_00930	COG4974	Belongs to the 'phage' integrase family
AT726_00935	COG1206	Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
AT726_00940	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
AT726_00970	COG0335	large ribosomal subunit rRNA binding
AT726_00980	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
AT726_01010	COG0742	ribosomal rna small subunit methyltransferase
AT726_01025	COG1785	Belongs to the alkaline phosphatase family
AT726_01030	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
AT726_01035	COG2739	Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
AT726_01040	COG0552	protein localization to endoplasmic reticulum
AT726_01045	COG1196	nuclear chromosome segregation
AT726_01050	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
AT726_01070	COG1012	belongs to the aldehyde dehydrogenase family
AT726_01085	COG0577	efflux transmembrane transporter activity
AT726_01095	COG1136	(ABC) transporter
AT726_01140	COG1115	amino acid carrier protein
AT726_01170	COG1285	pathogenesis
AT726_01185	COG3973	AAA domain
AT726_01195	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
AT726_01200	COG3328	transposase activity
AT726_01205	COG0732	type I restriction modification DNA specificity domain
AT726_01210	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
AT726_01230	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AT726_01230	COG2190	(PTS) system
AT726_01230	COG1263	PTS System
AT726_01320	COG1595	DNA-templated transcription, initiation
AT726_01340	COG2039	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
AT726_01355	COG0419	ATPase involved in DNA repair
AT726_01360	COG0420	3'-5' exonuclease activity
AT726_01365	COG1609	Transcriptional regulator
AT726_01380	COG0406	alpha-ribazole phosphatase activity
AT726_01400	COG4221	oxidoreductase activity
AT726_01415	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
AT726_01420	COG1461	Dihydroxyacetone kinase
AT726_01425	COG1302	Protein conserved in bacteria
AT726_01430	COG0227	Belongs to the bacterial ribosomal protein bL28 family
AT726_01455	COG1564	THIamine pyrophosphokinase
AT726_01460	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
AT726_01465	COG1162	GTPase activity
AT726_01475	COG0631	protein serine/threonine phosphatase activity
AT726_01485	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
AT726_01485	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
AT726_01490	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
AT726_01500	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
AT726_01505	COG2996	Protein conserved in bacteria
AT726_01520	COG0426	domain, Protein
AT726_01525	COG0346	lactoylglutathione lyase activity
AT726_01540	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
AT726_01550	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
AT726_01555	COG1758	RNA polymerase activity
AT726_01560	COG0194	GDP metabolic process
AT726_01570	COG2720	vancomycin resistance protein
AT726_01580	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
AT726_01595	COG1905	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
AT726_01620	COG0772	Belongs to the SEDS family
AT726_01625	COG1074	ATP-dependent DNA helicase activity
AT726_01640	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
AT726_01655	COG1160	GTP binding
AT726_01660	COG0539	negative regulation of cytoplasmic translation
AT726_01660	COG2183	response to ionizing radiation
AT726_01675	COG1141	Ferredoxin
AT726_01680	COG1187	pseudouridine synthase activity
AT726_01685	COG0700	Nucleoside recognition
AT726_01690	COG2715	membrane protein required for spore maturation
AT726_01695	COG1686	Belongs to the peptidase S11 family
AT726_01700	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
AT726_01710	COG0697	spore germination
AT726_01720	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
AT726_01735	COG2172	sigma factor antagonist activity
AT726_01745	COG1686	Belongs to the peptidase S11 family
AT726_01780	COG2136	Putative SAM-dependent methyltransferase
AT726_01780	COG2521	methyltransferase
AT726_01785	COG0629	single-stranded DNA binding
AT726_01790	COG0612	Peptidase, M16
AT726_01795	COG0612	Peptidase, M16
AT726_01805	COG0813	purine-nucleoside phosphorylase activity
AT726_01810	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
AT726_01815	COG0628	permease
AT726_01830	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
AT726_01855	COG1216	Glycosyl transferase, family 2
AT726_01865	COG0438	transferase activity, transferring glycosyl groups
AT726_01870	COG1442	glycosyl transferase family 8
AT726_01870	COG1216	Glycosyl transferase, family 2
AT726_01875	COG1216	Glycosyl transferase, family 2
AT726_01885	COG1316	TRANSCRIPTIONal
AT726_01900	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
AT726_01905	COG0124	histidyl-tRNA synthetase
AT726_01915	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
AT726_01920	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
AT726_01925	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
AT726_01925	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
AT726_01930	COG2244	polysaccharide biosynthetic process
AT726_01935	COG2323	membrane
AT726_01945	COG1862	Preprotein translocase
AT726_01955	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
AT726_01970	COG0632	four-way junction helicase activity
AT726_01975	COG2116	formate transmembrane transporter activity
AT726_01995	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AT726_02000	COG1621	beta-fructofuranosidase activity
AT726_02005	COG1263	PTS System
AT726_02005	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AT726_02015	COG2801	Transposase and inactivated derivatives
AT726_02020	COG1609	Transcriptional regulator
AT726_02030	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
AT726_02040	COG0653	protein targeting
AT726_02070	COG4989	oxidoreductase activity
AT726_02100	COG0733	neurotransmitter:sodium symporter activity
AT726_02145	COG1112	Superfamily I DNA and RNA helicases and helicase subunits
AT726_02155	COG0446	pyridine nucleotide-disulphide oxidoreductase
AT726_02420	COG0671	phosphoesterase, PA-phosphatase related
AT726_02430	COG1278	Cold shock
AT726_02435	COG0116	Belongs to the methyltransferase superfamily
AT726_02465	COG4677	pectinesterase activity
AT726_02480	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
AT726_02495	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
AT726_02500	COG0211	Belongs to the bacterial ribosomal protein bL27 family
AT726_02510	COG0261	This protein binds to 23S rRNA in the presence of protein L20
AT726_02515	COG0784	Response regulator, receiver
AT726_02515	COG2205	protein histidine kinase activity
AT726_02515	COG2198	Histidine kinase
AT726_02515	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AT726_02520	COG1994	Peptidase M50
AT726_02545	COG0367	asparagine synthase
AT726_02555	COG2003	Belongs to the UPF0758 family
AT726_02565	COG0285	dihydrofolate synthase activity
AT726_02595	COG1363	Peptidase, m42
AT726_02600	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
AT726_02605	COG0291	Belongs to the bacterial ribosomal protein bL35 family
AT726_02610	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
AT726_02620	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
AT726_02625	COG1484	DNA-dependent DNA replication
AT726_02630	COG3611	Membrane attachment protein
AT726_02640	COG0237	dephospho-CoA kinase activity
AT726_02645	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
AT726_02665	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
AT726_02665	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
AT726_02670	COG1408	metallophosphoesterase
AT726_02680	COG2084	Dehydrogenase
AT726_02695	COG0726	polysaccharide deacetylase
AT726_02700	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
AT726_02710	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AT726_02710	COG1263	PTS System
AT726_02710	COG2190	(PTS) system
AT726_02715	COG2190	(PTS) system
AT726_02715	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AT726_02715	COG1263	PTS System
AT726_02720	COG0142	geranyltranstransferase activity
AT726_02725	COG1252	NADH dehydrogenase
AT726_02745	COG1051	belongs to the nudix hydrolase family
AT726_02755	COG0205	6-phosphofructokinase activity
AT726_02760	COG0587	DNA-directed DNA polymerase activity
AT726_02765	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
AT726_02770	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
AT726_02775	COG0827	DNA restriction-modification system
AT726_02780	COG3874	Sporulation protein YtfJ
AT726_02790	COG0367	asparagine synthase
AT726_02795	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
AT726_02800	COG2860	membrane
AT726_02805	COG0488	(ABC) transporter
AT726_02810	COG1362	aminopeptidase activity
AT726_02885	COG1388	LysM domain
AT726_02885	COG0860	N-Acetylmuramoyl-L-alanine amidase
AT726_02890	COG1045	serine acetyltransferase
AT726_02895	COG1028	Short-chain dehydrogenase reductase Sdr
AT726_02910	COG1098	S1 RNA binding domain
AT726_02915	COG0492	ferredoxin-NADP+ reductase activity
AT726_02920	COG1963	PFAM Acid phosphatase vanadium-dependent haloperoxidase related
AT726_02925	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
AT726_02935	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
AT726_02945	COG0561	phosphatase activity
AT726_02950	COG0647	UMP catabolic process
AT726_02955	COG4470	Protein conserved in bacteria
AT726_02970	COG0534	Mate efflux family protein
AT726_02975	COG1609	Transcriptional regulator
AT726_02980	COG3842	ATPase activity
AT726_02985	COG2508	Transcriptional regulator
AT726_02995	COG0564	pseudouridine synthase activity
AT726_03000	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
AT726_03005	COG2357	RelA SpoT domain protein
AT726_03025	COG1393	Belongs to the ArsC family
AT726_03035	COG4608	Belongs to the ABC transporter superfamily
AT726_03040	COG0444	Belongs to the ABC transporter superfamily
AT726_03045	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AT726_03050	COG0601	transmembrane transport
AT726_03055	COG4166	transmembrane transport
AT726_03065	COG1132	(ABC) transporter
AT726_03070	COG1132	(ABC) transporter
AT726_03080	COG0542	response to heat
AT726_03085	COG0561	phosphatase activity
AT726_03120	COG0495	leucyl-tRNA aminoacylation
AT726_03125	COG1242	4 iron, 4 sulfur cluster binding
AT726_03130	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
AT726_03150	COG0589	response to stress
AT726_03155	COG0149	triose-phosphate isomerase activity
AT726_03160	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
AT726_03185	COG0534	Mate efflux family protein
AT726_03195	COG2267	carboxylic ester hydrolase activity
AT726_03210	COG2814	Major facilitator Superfamily
AT726_03215	COG1120	ATPase activity
AT726_03220	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AT726_03225	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AT726_03255	COG3250	beta-galactosidase activity
AT726_03265	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
AT726_03270	COG1757	Na H antiporter
AT726_03290	COG0531	amino acid
AT726_03300	COG0697	spore germination
AT726_03310	COG1876	peptidase activity
AT726_03320	COG0450	alkyl hydroperoxide reductase
AT726_03340	COG1210	Utp--glucose-1-phosphate uridylyltransferase
AT726_03345	COG1316	TRANSCRIPTIONal
AT726_03355	COG0438	transferase activity, transferring glycosyl groups
AT726_03360	COG0438	transferase activity, transferring glycosyl groups
AT726_03395	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
AT726_03400	COG0489	protein tyrosine kinase activity
AT726_03425	COG4750	Nucleotidyl transferase
AT726_03430	COG0697	spore germination
AT726_03440	COG0463	Glycosyl transferase, family 2
AT726_03460	COG2089	acid synthase
AT726_03465	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
AT726_03485	COG3475	LICD family
AT726_03495	COG1216	Glycosyl transferase, family 2
AT726_03500	COG1216	Glycosyl transferase, family 2
AT726_03505	COG4193	domain, Protein
AT726_03505	COG5263	repeat protein
AT726_03535	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
AT726_03545	COG1316	TRANSCRIPTIONal
AT726_03560	COG1028	Short-chain dehydrogenase reductase Sdr
AT726_03595	COG0602	queuosine metabolic process
AT726_03605	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
AT726_03605	COG1328	CTP reductase activity
AT726_03615	COG1328	CTP reductase activity
AT726_03615	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
AT726_03620	COG3344	reverse transcriptase
AT726_03645	COG1108	ABC-type Mn2 Zn2 transport systems permease components
AT726_03650	COG1121	(ABC) transporter
AT726_03655	COG0803	Belongs to the bacterial solute-binding protein 9 family
AT726_03670	COG1737	Transcriptional regulator
AT726_03675	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
AT726_03700	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
AT726_03705	COG1012	belongs to the aldehyde dehydrogenase family
AT726_03735	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
AT726_03750	COG3344	reverse transcriptase
AT726_03755	COG3328	transposase activity
AT726_03770	COG3547	Transposase (IS116 IS110 IS902 family)
AT726_03775	COG2972	Histidine kinase
AT726_03780	COG4753	response regulator
AT726_03780	COG2207	Transcriptional regulator
AT726_03800	COG1874	Beta-galactosidase
AT726_03815	COG3409	Peptidoglycan-binding domain 1 protein
AT726_03815	COG5632	N-Acetylmuramoyl-L-alanine amidase
AT726_03815	COG1388	LysM domain
AT726_03820	COG1253	flavin adenine dinucleotide binding
AT726_03840	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
AT726_03860	COG0402	S-adenosylhomocysteine deaminase activity
AT726_03865	COG2985	domain, Protein
AT726_03870	COG0584	glycerophosphoryl diester phosphodiesterase
AT726_03875	COG1959	2 iron, 2 sulfur cluster binding
AT726_03910	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
AT726_03925	COG1307	EDD domain protein, DegV family
AT726_03940	COG1126	abc transporter atp-binding protein
AT726_03945	COG4215	(ABC) transporter
AT726_03950	COG0765	amino acid transport
AT726_04005	COG0488	(ABC) transporter
AT726_04030	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
AT726_04040	COG2226	methyltransferase
AT726_04060	COG3620	sequence-specific DNA binding
AT726_04100	COG2801	Transposase and inactivated derivatives
AT726_04105	COG1733	regulation of RNA biosynthetic process
AT726_04130	COG1760	l-serine dehydratase
AT726_04135	COG0556	nucleotide-excision repair
AT726_04140	COG0793	Belongs to the peptidase S41A family
AT726_04140	COG3409	Peptidoglycan-binding domain 1 protein
AT726_04150	COG2177	Part of the ABC transporter FtsEX involved in
AT726_04155	COG2884	Cell division ATP-binding protein ftsE
AT726_04160	COG1854	S-ribosylhomocysteine lyase activity
AT726_04165	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
AT726_04185	COG4098	Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
AT726_04190	COG1105	Belongs to the carbohydrate kinase PfkB family
AT726_04205	COG1739	Uncharacterized protein family UPF0029
AT726_04210	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
AT726_04215	COG1077	Cell shape determining protein MreB Mrl
AT726_04225	COG2385	sporulation resulting in formation of a cellular spore
AT726_04240	COG0355	proton-transporting ATP synthase activity, rotational mechanism
AT726_04245	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
AT726_04255	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
AT726_04265	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
AT726_04270	COG0636	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
AT726_04290	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
AT726_04295	COG0698	ribose 5-phosphate isomerase
AT726_04310	COG0009	L-threonylcarbamoyladenylate synthase
AT726_04315	COG2890	protein-(glutamine-N5) methyltransferase activity
AT726_04320	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
AT726_04325	COG0305	Participates in initiation and elongation during chromosome replication
AT726_04330	COG0359	binds to the 23S rRNA
AT726_04335	COG3887	signaling protein consisting of a modified GGDEF domain and a DHH domain
AT726_04345	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
AT726_04350	COG0629	single-stranded DNA binding
AT726_04355	COG0360	Binds together with S18 to 16S ribosomal RNA
AT726_04360	COG0012	GTP binding
AT726_04370	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
AT726_04375	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
AT726_04380	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
AT726_04385	COG0084	hydrolase, TatD family'
AT726_04395	COG4608	Belongs to the ABC transporter superfamily
AT726_04400	COG0444	Belongs to the ABC transporter superfamily
AT726_04405	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AT726_04410	COG0601	transmembrane transport
AT726_04415	COG4166	transmembrane transport
AT726_04480	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
AT726_04490	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
AT726_04495	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
AT726_04500	COG1774	PSP1 C-terminal conserved region
AT726_04505	COG0470	DNA polymerase III
AT726_04510	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
AT726_04525	COG0101	tRNA pseudouridine synthase activity
AT726_04535	COG1122	ATPase activity
AT726_04540	COG1122	ATPase activity
AT726_04550	COG1132	(ABC) transporter
AT726_04555	COG0450	alkyl hydroperoxide reductase
AT726_04690	COG4974	Belongs to the 'phage' integrase family
AT726_04760	COG1475	DNA binding
AT726_04765	COG1192	Involved in chromosome partitioning
AT726_04775	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
AT726_04780	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
AT726_04785	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
AT726_04790	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
AT726_04805	COG0581	inorganic phosphate transmembrane transporter activity
AT726_04810	COG0573	inorganic phosphate transmembrane transporter activity
AT726_04815	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
AT726_04820	COG5002	protein histidine kinase activity
AT726_04825	COG0745	RESPONSE REGULATOR receiver
AT726_04830	COG0590	tRNA wobble adenosine to inosine editing
AT726_04865	COG1435	thymidine kinase activity
AT726_04870	COG1619	proteins homologs of microcin C7 resistance protein MccF
AT726_04875	COG1473	amidohydrolase
AT726_04880	COG5001	Diguanylate cyclase
AT726_04880	COG3300	MHYT domain
AT726_04885	COG0789	Transcriptional regulator
AT726_04915	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
AT726_04925	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
AT726_04930	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
AT726_04945	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
AT726_04960	COG0281	malic enzyme
AT726_04970	COG0622	Phosphoesterase
AT726_04975	COG0174	glutamine synthetase
AT726_04990	COG0284	orotidine-5'-phosphate decarboxylase activity
AT726_05015	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
AT726_05030	COG1418	mRNA catabolic process
AT726_05035	COG1940	carbohydrate kinase activity
AT726_05050	COG0706	membrane insertase activity
AT726_05055	COG0706	membrane insertase activity
AT726_05065	COG0426	domain, Protein
AT726_05085	COG1012	belongs to the aldehyde dehydrogenase family
AT726_05085	COG1454	alcohol dehydrogenase
AT726_05095	COG2252	PERMEase
AT726_05115	COG1363	Peptidase, m42
AT726_05120	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
AT726_05140	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
AT726_05145	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
AT726_05150	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
AT726_05170	COG1210	Utp--glucose-1-phosphate uridylyltransferase
AT726_05200	COG4464	protein tyrosine phosphatase activity
AT726_05225	COG4607	ABC-type enterochelin transport system periplasmic component
AT726_05230	COG4604	ABC transporter, ATP-binding protein
AT726_05235	COG4605	iron ion homeostasis
AT726_05240	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AT726_05245	COG1917	Cupin 2, conserved barrel domain protein
AT726_05245	COG4977	sequence-specific DNA binding
AT726_05260	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
AT726_05265	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
AT726_05290	COG0534	Mate efflux family protein
AT726_05295	COG1098	S1 RNA binding domain
AT726_05330	COG1575	Belongs to the MenA family. Type 1 subfamily
AT726_05335	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
AT726_05340	COG3956	TIGRFAM MazG family protein
AT726_05345	COG2244	polysaccharide biosynthetic process
AT726_05350	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
AT726_05380	COG1846	Transcriptional regulator
AT726_05420	COG3328	transposase activity
AT726_05425	COG2205	protein histidine kinase activity
AT726_05500	COG0151	Belongs to the GarS family
AT726_05510	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
AT726_05515	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
AT726_05520	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
AT726_05525	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
AT726_05535	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
AT726_05540	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
AT726_05550	COG0516	GMP reductase activity
AT726_05550	COG0517	IMP dehydrogenase activity
AT726_05555	COG2002	toxin-antitoxin pair type II binding
AT726_05560	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
AT726_05565	COG0193	aminoacyl-tRNA hydrolase activity
AT726_05570	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
AT726_05575	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
AT726_05580	COG2088	sporulation resulting in formation of a cellular spore
AT726_05585	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
AT726_05590	COG4466	Protein conserved in bacteria
AT726_05600	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
AT726_05605	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
AT726_05610	COG1078	dGTPase activity
AT726_05620	COG4844	belongs to the
AT726_05625	COG0280	phosphate acetyltransferase
AT726_05630	COG3773	Cell wall hydrolase
AT726_05640	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
AT726_05655	COG0537	adenosine 5'-monophosphoramidase activity
AT726_05665	COG0142	geranyltranstransferase activity
AT726_05670	COG0561	phosphatase activity
AT726_05675	COG1592	Rubrerythrin
AT726_05680	COG1592	Rubrerythrin
AT726_05685	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
AT726_05690	COG1882	Formate acetyltransferase
AT726_05700	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
AT726_05705	COG2011	ABC-type metal ion transport system permease component
AT726_05710	COG1464	Belongs to the NlpA lipoprotein family
AT726_05720	COG1115	amino acid carrier protein
AT726_05730	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
AT726_05760	COG3546	catalase activity
AT726_05770	COG0513	Belongs to the DEAD box helicase family
AT726_05775	COG0488	(ABC) transporter
AT726_05795	COG1266	CAAX protease self-immunity
AT726_05800	COG0393	Putative heavy-metal-binding
AT726_05810	COG3478	Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082)
AT726_05815	COG0217	transcriptional regulatory protein
AT726_05840	COG1979	alcohol dehydrogenase
AT726_05865	COG1408	metallophosphoesterase
AT726_05880	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AT726_05890	COG1876	peptidase activity
AT726_05905	COG2247	cell wall binding repeat
AT726_05905	COG0860	N-Acetylmuramoyl-L-alanine amidase
AT726_05910	COG1741	Belongs to the pirin family
AT726_05920	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
AT726_05925	COG2610	gluconate transmembrane transporter activity
AT726_05930	COG3620	sequence-specific DNA binding
AT726_05950	COG1408	metallophosphoesterase
AT726_05955	COG1114	Component of the transport system for branched-chain amino acids
AT726_05965	COG0789	Transcriptional regulator
AT726_05965	COG4978	Transcriptional regulator
AT726_06015	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
AT726_06020	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
AT726_06030	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
AT726_06030	COG3270	Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA
AT726_06035	COG2824	Alkylphosphonate utilization operon protein PhnA
AT726_06060	COG1357	PFAM Pentapeptide repeats (8 copies)
AT726_06085	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
AT726_06090	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
AT726_06095	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
AT726_06100	COG0187	DNA topoisomerase II activity
AT726_06105	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
AT726_06110	COG2501	S4 domain
AT726_06115	COG4481	Protein conserved in bacteria
AT726_06120	COG0668	transmembrane transport
AT726_06125	COG1475	DNA binding
AT726_06130	COG1192	Involved in chromosome partitioning
AT726_06150	COG0445	tRNA wobble uridine modification
AT726_06155	COG4152	abc transporter atp-binding protein
AT726_06160	COG1668	transmembrane transport
AT726_06165	COG0592	DNA-directed DNA polymerase activity
AT726_06170	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
AT726_06200	COG0017	Asparaginyl-tRNA synthetase
AT726_06210	COG1523	belongs to the glycosyl hydrolase 13 family
AT726_06220	COG0018	arginyl-trna synthetase
AT726_06340	COG0504	CTP synthase activity
AT726_06350	COG2509	5-formyltetrahydrofolate cyclo-ligase activity
AT726_06375	COG0745	RESPONSE REGULATOR receiver
AT726_06380	COG2770	Histidine kinase
AT726_06380	COG2205	protein histidine kinase activity
AT726_06385	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
AT726_06390	COG1592	Rubrerythrin
AT726_06400	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
AT726_06405	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
AT726_06420	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
AT726_06435	COG3512	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
AT726_06450	COG0366	Alpha amylase catalytic
AT726_06455	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
AT726_06470	COG2203	Gaf domain
AT726_06470	COG5001	Diguanylate cyclase
AT726_06470	COG3706	GGDEF domain
AT726_06470	COG4251	negative regulation of phosphorylation
AT726_06480	COG1595	DNA-templated transcription, initiation
AT726_06490	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
AT726_06495	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
AT726_06510	COG0475	glutathione-regulated potassium exporter activity
AT726_06520	COG1494	fructose-1,6-bisphosphatase
AT726_06550	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
AT726_06565	COG0251	oxidation-reduction process
AT726_06570	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
AT726_06575	COG0215	cysteine-tRNA ligase activity
AT726_06580	COG1939	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
AT726_06585	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
AT726_06595	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
AT726_06600	COG0250	Participates in transcription elongation, termination and antitermination
AT726_06605	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
AT726_06610	COG0081	regulation of translation
AT726_06615	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
AT726_06620	COG0222	ribosome binding
AT726_06625	COG2813	Specifically methylates the guanine in position
AT726_06630	COG0085	RNA polymerase activity
AT726_06635	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
AT726_06640	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
AT726_06645	COG0049	tRNA binding
AT726_06650	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
AT726_06655	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
AT726_06660	COG0051	transcription antitermination factor activity, RNA binding
AT726_06670	COG0088	Forms part of the polypeptide exit tunnel
AT726_06675	COG0089	rRNA binding
AT726_06680	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
AT726_06685	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
AT726_06690	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
AT726_06695	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
AT726_06700	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
AT726_06705	COG0255	Belongs to the universal ribosomal protein uL29 family
AT726_06720	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
AT726_06725	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
AT726_06730	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
AT726_06735	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
AT726_06740	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
AT726_06745	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
AT726_06750	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
AT726_06765	COG0201	protein transport
AT726_06770	COG0563	adenylate kinase activity
AT726_06775	COG0024	Methionine aminopeptidase
AT726_06785	COG0257	Belongs to the bacterial ribosomal protein bL36 family
AT726_06795	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
AT726_06800	COG0202	RNA polymerase activity
AT726_06810	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
AT726_06820	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
AT726_06825	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
AT726_06830	COG1846	Transcriptional regulator
AT726_06840	COG2608	mercury ion transmembrane transporter activity
AT726_06845	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
AT726_06870	COG2267	carboxylic ester hydrolase activity
AT726_06885	COG1181	Belongs to the D-alanine--D-alanine ligase family
AT726_06900	COG1546	Belongs to the CinA family
AT726_06900	COG1058	Belongs to the CinA family
AT726_06905	COG0126	phosphoglycerate kinase activity
AT726_06910	COG0149	triose-phosphate isomerase activity
AT726_06925	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
AT726_06935	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
AT726_06955	COG2065	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
AT726_06970	COG3859	Proton-coupled thiamine transporter YuaJ
AT726_06980	COG0561	phosphatase activity
AT726_06985	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
AT726_06990	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
AT726_06995	COG3328	transposase activity
AT726_07000	COG2183	response to ionizing radiation
AT726_07010	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
AT726_07015	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
AT726_07020	COG1846	Transcriptional regulator
AT726_07035	COG4106	trans-aconitate 2-methyltransferase activity
AT726_07045	COG1752	Esterase of the alpha-beta hydrolase superfamily
AT726_07050	COG1525	nuclease
AT726_07070	COG0778	Nitroreductase
AT726_07080	COG4894	glucomannan catabolic process
AT726_07105	COG4604	ABC transporter, ATP-binding protein
AT726_07115	COG1881	PFAM PEBP family protein
AT726_07130	COG1428	Deoxynucleoside kinase
AT726_07135	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
AT726_07145	COG3620	sequence-specific DNA binding
AT726_07155	COG2207	Transcriptional regulator
AT726_07165	COG0351	phosphomethylpyrimidine kinase
AT726_07175	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
AT726_07180	COG1328	CTP reductase activity
AT726_07185	COG1114	Component of the transport system for branched-chain amino acids
AT726_07210	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
AT726_07225	COG1288	antiporter activity
AT726_07235	COG0628	permease
AT726_07240	COG0110	maltose O-acetyltransferase activity
AT726_07285	COG0110	maltose O-acetyltransferase activity
AT726_07300	COG2070	2-Nitropropane dioxygenase
AT726_07305	COG0511	ligase activity, forming carbon-carbon bonds
AT726_07310	COG0439	Biotin carboxylase
AT726_07315	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
AT726_07320	COG0825	malonyl-CoA metabolic process
AT726_07335	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
AT726_07345	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
AT726_07350	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
AT726_07360	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
AT726_07365	COG0739	heme binding
AT726_07440	COG0802	atpase or kinase
AT726_07445	COG1214	PFAM Peptidase M22, glycoprotease
AT726_07465	COG0488	(ABC) transporter
AT726_07470	COG2344	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
AT726_07480	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
AT726_07495	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
AT726_07500	COG0459	protein refolding
AT726_07505	COG0736	holo-[acyl-carrier-protein] synthase activity
AT726_07510	COG2155	Conserved Protein
AT726_07515	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
AT726_07520	COG0745	RESPONSE REGULATOR receiver
AT726_07525	COG5002	protein histidine kinase activity
AT726_07530	COG0436	Aminotransferase
AT726_07535	COG3103	Sh3 type 3 domain protein
AT726_07535	COG0860	N-Acetylmuramoyl-L-alanine amidase
AT726_07535	COG4991	sh3 domain protein
AT726_07540	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
AT726_07545	COG2137	regulation of response to DNA damage stimulus
AT726_07550	COG2188	Transcriptional regulator
AT726_07565	COG0366	Alpha amylase catalytic
AT726_07570	COG0739	heme binding
AT726_07575	COG4536	flavin adenine dinucleotide binding
AT726_07580	COG1322	Protein conserved in bacteria
AT726_07585	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
AT726_07590	COG1597	lipid kinase activity
AT726_07600	COG5263	repeat protein
AT726_07600	COG4193	domain, Protein
AT726_07615	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
AT726_07625	COG0210	DNA helicase
AT726_07630	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
AT726_07645	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
AT726_07650	COG3583	domain protein
AT726_07655	COG1950	PFAM Membrane protein of
AT726_07670	COG0546	phosphoglycolate phosphatase activity
AT726_07700	COG1481	regulation of sporulation
AT726_07715	COG0148	phosphopyruvate hydratase activity
AT726_07720	COG0628	permease
AT726_07735	COG0530	calcium, potassium:sodium antiporter activity
AT726_07745	COG0557	exoribonuclease II activity
AT726_07750	COG2843	Capsule synthesis protein
AT726_07755	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
AT726_07775	COG1696	Membrane protein involved in D-alanine export
AT726_07785	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
AT726_07795	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
AT726_07805	COG1175	transmembrane transport
AT726_07810	COG0395	ABC-type sugar transport system, permease component
AT726_07815	COG1653	transport
AT726_07820	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
AT726_07825	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
AT726_07830	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
AT726_07835	COG3328	transposase activity
AT726_07840	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AT726_07855	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
AT726_07875	COG1272	protein, Hemolysin III
AT726_07880	COG3681	Belongs to the UPF0597 family
AT726_07885	COG2268	Band 7 protein
AT726_07890	COG1876	peptidase activity
AT726_07905	COG0628	permease
AT726_07920	COG2217	Heavy metal translocating P-type atpase
AT726_07930	COG5002	protein histidine kinase activity
AT726_07935	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AT726_07955	COG3300	MHYT domain
AT726_07955	COG5001	Diguanylate cyclase
AT726_07965	COG1937	Protein conserved in bacteria
AT726_07970	COG2217	Heavy metal translocating P-type atpase
AT726_07975	COG2608	mercury ion transmembrane transporter activity
AT726_07985	COG1131	(ABC) transporter
AT726_08005	COG5002	protein histidine kinase activity
AT726_08040	COG1278	Cold shock
AT726_08045	COG0590	tRNA wobble adenosine to inosine editing
AT726_08080	COG0346	lactoylglutathione lyase activity
AT726_08095	COG1501	Belongs to the glycosyl hydrolase 31 family
AT726_08100	COG0561	phosphatase activity
AT726_08110	COG2207	Transcriptional regulator
AT726_08120	COG0277	FAD linked oxidase domain protein
AT726_08125	COG0534	Mate efflux family protein
AT726_08130	COG2033	superoxide reductase activity
AT726_08150	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
AT726_08160	COG1943	Transposase
AT726_08170	COG2364	Membrane
AT726_08175	COG2207	Transcriptional regulator
AT726_08180	COG2818	Glycosylase
AT726_08200	COG1136	(ABC) transporter
AT726_08260	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
AT726_08285	COG4807	Protein conserved in bacteria
AT726_08300	COG0039	L-malate dehydrogenase activity
AT726_08310	COG0019	diaminopimelate decarboxylase activity
AT726_08320	COG1473	amidohydrolase
AT726_08325	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
AT726_08330	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
AT726_08335	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
AT726_08340	COG2171	N-acyltransferase activity
AT726_08345	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
AT726_08360	COG0640	Transcriptional regulator
AT726_08370	COG2378	regulation of single-species biofilm formation
AT726_08390	COG2723	6-phospho-beta-galactosidase activity
AT726_08395	COG0768	penicillin binding
AT726_08455	COG1136	(ABC) transporter
AT726_08460	COG2003	Belongs to the UPF0758 family
AT726_08550	COG0583	DNA-binding transcription factor activity
AT726_08565	COG0069	glutamate synthase activity
AT726_08565	COG0070	glutamate synthase
AT726_08565	COG0067	glutamate synthase
AT726_08580	COG1533	DNA photolyase activity
AT726_08585	COG3711	transcriptional antiterminator
AT726_08595	COG2723	6-phospho-beta-galactosidase activity
AT726_08600	COG1316	TRANSCRIPTIONal
AT726_08605	COG0826	peptidase U32
AT726_08610	COG2323	membrane
AT726_08615	COG0037	tRNA processing
AT726_08635	COG1393	Belongs to the ArsC family
AT726_08645	COG3557	Belongs to the UPF0374 family
AT726_08650	COG2309	aminopeptidase activity
AT726_08745	COG1175	transmembrane transport
AT726_08750	COG3833	ABC-type maltose transport systems, permease component
AT726_08755	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
AT726_08790	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
AT726_08890	COG1192	Involved in chromosome partitioning
AT726_08920	COG0577	efflux transmembrane transporter activity
AT726_08925	COG1136	(ABC) transporter
AT726_08930	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
AT726_08935	COG0583	DNA-binding transcription factor activity
AT726_08940	COG3620	sequence-specific DNA binding
AT726_08960	COG0534	Mate efflux family protein
AT726_08970	COG2211	Major facilitator Superfamily
AT726_08975	COG0297	glycogen (starch) synthase activity
AT726_08980	COG0024	Methionine aminopeptidase
AT726_08985	COG3250	beta-galactosidase activity
AT726_08990	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
AT726_09000	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
AT726_09020	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
AT726_09025	COG4468	UDPglucose--hexose-1-phosphate uridylyltransferase
AT726_09030	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
AT726_09035	COG3328	transposase activity
AT726_09055	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
AT726_09060	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
AT726_09070	COG1811	Na channel or pump
AT726_09080	COG0006	proline dipeptidase activity
AT726_09095	COG1283	sodium-dependent phosphate transmembrane transporter activity
AT726_09100	COG0396	ATPase activity
AT726_09105	COG0719	Fe-S assembly protein
AT726_09110	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
AT726_09115	COG0822	iron-sulfur transferase activity
AT726_09120	COG0719	Fe-S assembly protein
AT726_09130	COG2905	signal-transduction protein containing cAMP-binding and CBS domains
AT726_09135	COG3377	Domain of unknown function (DUF1805)
AT726_09150	COG0297	glycogen (starch) synthase activity
AT726_09155	COG0058	SHG alpha-glucan phosphorylase activity
AT726_09180	COG1595	DNA-templated transcription, initiation
AT726_09185	COG1403	HNH endonuclease
AT726_09200	COG0659	secondary active sulfate transmembrane transporter activity
AT726_09205	COG1061	Type III restriction enzyme res subunit
AT726_09235	COG1592	Rubrerythrin
AT726_09250	COG2340	Cysteine-rich secretory protein family
AT726_09260	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
AT726_09265	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
AT726_09280	COG4667	esterase of the alpha-beta hydrolase superfamily
AT726_09285	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
AT726_09290	COG0242	peptide deformylase activity
AT726_09330	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
AT726_09335	COG2011	ABC-type metal ion transport system permease component
AT726_09340	COG1464	Belongs to the NlpA lipoprotein family
AT726_09345	COG1473	amidohydrolase
AT726_09360	COG2985	domain, Protein
AT726_09365	COG3885	ferrous iron binding
AT726_09365	COG2078	PFAM AMMECR1 domain protein
AT726_09390	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
AT726_09420	COG1609	Transcriptional regulator
AT726_09430	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AT726_09435	COG1621	beta-fructofuranosidase activity
AT726_09450	COG0513	Belongs to the DEAD box helicase family
AT726_09455	COG2364	Membrane
AT726_09460	COG1523	belongs to the glycosyl hydrolase 13 family
AT726_09465	COG0635	Involved in the biosynthesis of porphyrin-containing compound
AT726_09470	COG3481	metal-dependent phosphohydrolase, HD sub domain
AT726_09475	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
AT726_09490	COG3290	protein histidine kinase activity
AT726_09515	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
AT726_09530	COG0302	gtp cyclohydrolase
AT726_09535	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
AT726_09540	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
AT726_09545	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
AT726_09550	COG0457	Tetratricopeptide repeat
AT726_09555	COG2738	Putative neutral zinc metallopeptidase
AT726_09570	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
AT726_09575	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
AT726_09580	COG0617	tRNA 3'-terminal CCA addition
AT726_09590	COG3935	DnaD domain protein
AT726_09595	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
AT726_09600	COG1943	Transposase
AT726_09605	COG4499	WXG100 protein secretion system (Wss), protein YukC
AT726_09605	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
AT726_09610	COG3331	DNA recombination
AT726_09620	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
AT726_09635	COG1692	metallophosphoesterase
AT726_09640	COG2359	stage V sporulation protein S
AT726_09645	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
AT726_09650	COG4550	Control of competence regulator ComK, YlbF/YmcA
AT726_09670	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
AT726_09675	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
AT726_09690	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
AT726_09705	COG3763	UPF0154 protein
AT726_09715	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
AT726_09720	COG0187	DNA topoisomerase II activity
AT726_09725	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
AT726_09740	COG1702	phosphate starvation-inducible protein PhoH
AT726_09745	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
AT726_09750	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
AT726_09755	COG0295	cytidine deaminase activity
AT726_09765	COG1381	Involved in DNA repair and RecF pathway recombination
AT726_09770	COG0423	glycine-tRNA ligase activity
AT726_09775	COG0358	DNA primase activity
AT726_09780	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
AT726_09785	COG2384	SAM-dependent methyltransferase
AT726_09790	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
AT726_09795	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
AT726_09800	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
AT726_09800	COG0072	phenylalanine-tRNA ligase activity
AT726_09805	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
AT726_09805	COG1605	Chorismate mutase
AT726_09810	COG1609	Transcriptional regulator
AT726_09815	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
AT726_09825	COG0583	DNA-binding transcription factor activity
AT726_09850	COG1956	GAF domain-containing protein
AT726_09860	COG1104	cysteine desulfurase activity
AT726_09875	COG1012	belongs to the aldehyde dehydrogenase family
AT726_09875	COG1454	alcohol dehydrogenase
AT726_09910	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
AT726_09915	COG0779	Required for maturation of 30S ribosomal subunits
AT726_09920	COG0195	Participates in both transcription termination and antitermination
AT726_09925	COG2740	Nucleic-acid-binding protein implicated in transcription termination
AT726_09940	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
AT726_09945	COG1368	sulfuric ester hydrolase activity
AT726_09955	COG0322	excinuclease ABC activity
AT726_09960	COG2197	response regulator
AT726_09980	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
AT726_09990	COG0622	Phosphoesterase
AT726_10030	COG0569	domain protein
AT726_10040	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
AT726_10045	COG0561	phosphatase activity
AT726_10055	COG0242	peptide deformylase activity
AT726_10080	COG0772	Belongs to the SEDS family
AT726_10100	COG4471	UPF0298 protein
AT726_10105	COG0228	four-way junction DNA binding
AT726_10110	COG1837	Belongs to the UPF0109 family
AT726_10150	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
AT726_10155	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
AT726_10180	COG0113	porphobilinogen synthase activity
AT726_10185	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
AT726_10185	COG1648	precorrin-2 dehydrogenase activity
AT726_10190	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AT726_10195	COG0765	amino acid transport
AT726_10200	COG1126	abc transporter atp-binding protein
AT726_10225	COG2207	Transcriptional regulator
AT726_10225	COG4753	response regulator
AT726_10255	COG1846	Transcriptional regulator
AT726_10260	COG0386	Belongs to the glutathione peroxidase family
AT726_10265	COG1132	(ABC) transporter
AT726_10275	COG0596	Alpha beta hydrolase
AT726_10295	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
AT726_10330	COG2720	vancomycin resistance protein
AT726_10340	COG1929	Belongs to the glycerate kinase type-1 family
AT726_10350	COG4260	virion core protein, lumpy skin disease virus
AT726_10360	COG1842	Phage shock protein A
AT726_10375	COG2244	polysaccharide biosynthetic process
AT726_10390	COG1187	pseudouridine synthase activity
AT726_10395	COG0613	PHP domain protein
AT726_10405	COG1986	Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives. Probably excludes non-canonical purines from DNA precursor pool, thus preventing their incorporation into DNA and avoiding chromosomal lesions
AT726_10415	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
AT726_10420	COG1674	ftsk spoiiie
AT726_10425	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
AT726_10450	COG0489	protein tyrosine kinase activity
AT726_10455	COG1323	Belongs to the UPF0348 family
AT726_10460	COG1399	metal-binding, possibly nucleic acid-binding protein
AT726_10465	COG0333	Belongs to the bacterial ribosomal protein bL32 family
AT726_10515	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
AT726_10520	COG0513	Belongs to the DEAD box helicase family
AT726_10525	COG0648	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
AT726_10535	COG0543	2 iron, 2 sulfur cluster binding
AT726_10555	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
AT726_10560	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
AT726_10570	COG0267	Belongs to the bacterial ribosomal protein bL33 family
AT726_10575	COG0039	L-malate dehydrogenase activity
AT726_10580	COG1940	carbohydrate kinase activity
AT726_10585	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
AT726_10590	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
AT726_10615	COG4537	Required for transformation and DNA binding
AT726_10625	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
AT726_10640	COG2509	5-formyltetrahydrofolate cyclo-ligase activity
AT726_10660	COG0640	Transcriptional regulator
AT726_10685	COG0004	ammonium transporteR
AT726_10690	COG0658	competence protein
AT726_10690	COG2333	competence protein COMEC
AT726_10695	COG4166	transmembrane transport
AT726_10700	COG0488	(ABC) transporter
AT726_10715	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
AT726_10715	COG1199	ATP-dependent helicase activity
AT726_10725	COG1132	(ABC) transporter
AT726_10730	COG1132	(ABC) transporter
AT726_10735	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
AT726_10740	COG2195	Cleaves the N-terminal amino acid of tripeptides
AT726_10750	COG0564	pseudouridine synthase activity
AT726_10775	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
AT726_10795	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
AT726_10815	COG2153	protein acetylation
AT726_10825	COG0531	amino acid
AT726_10875	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
AT726_10880	COG3022	response to hydroperoxide
AT726_10905	COG2190	(PTS) system
AT726_10905	COG1263	PTS System
AT726_10905	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AT726_10930	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
AT726_10960	COG1619	proteins homologs of microcin C7 resistance protein MccF
AT726_10975	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
AT726_10975	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
AT726_10980	COG1268	BioY protein
AT726_11005	COG1705	Flagellar rod assembly protein muramidase FlgJ
AT726_11055	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
AT726_11110	COG1388	LysM domain
AT726_11110	COG5632	N-Acetylmuramoyl-L-alanine amidase
AT726_11110	COG3409	Peptidoglycan-binding domain 1 protein
AT726_11125	COG3328	transposase activity
AT726_11140	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
AT726_11195	COG0494	nUDIX hydrolase
AT726_11210	COG0584	glycerophosphoryl diester phosphodiesterase
AT726_11240	COG3328	transposase activity
AT726_11245	COG1349	DNA-binding transcription factor activity
AT726_11250	COG1105	Belongs to the carbohydrate kinase PfkB family
AT726_11255	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
AT726_11255	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AT726_11255	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AT726_11290	COG0708	Exodeoxyribonuclease III
AT726_11295	COG5002	protein histidine kinase activity
AT726_11300	COG0745	RESPONSE REGULATOR receiver
AT726_11350	COG0640	Transcriptional regulator
AT726_11355	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
AT726_11360	COG0534	Mate efflux family protein
AT726_11390	COG2826	transposase and inactivated derivatives, IS30 family
AT726_11395	COG0720	synthase
AT726_11400	COG0602	queuosine metabolic process
AT726_11405	COG0302	gtp cyclohydrolase
AT726_11410	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
AT726_11420	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
AT726_11430	COG1621	beta-fructofuranosidase activity
AT726_11445	COG0671	phosphoesterase, PA-phosphatase related
AT726_11460	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
AT726_11475	COG4166	transmembrane transport
AT726_11480	COG0601	transmembrane transport
AT726_11485	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AT726_11490	COG0444	Belongs to the ABC transporter superfamily
AT726_11515	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
AT726_11530	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
AT726_11535	COG1570	exodeoxyribonuclease VII activity
AT726_11545	COG0142	geranyltranstransferase activity
AT726_11550	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
AT726_11555	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
AT726_11560	COG0497	DNA recombination
AT726_11565	COG0750	zinc metalloprotease
AT726_11570	COG0745	RESPONSE REGULATOR receiver
AT726_11575	COG1649	PFAM Uncharacterised BCR, COG1649
AT726_11590	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
AT726_11605	COG0735	belongs to the Fur family
AT726_11610	COG4974	Belongs to the 'phage' integrase family
AT726_11620	COG1827	regulation of RNA biosynthetic process
AT726_11660	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AT726_11665	COG0366	Alpha amylase catalytic
AT726_11670	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AT726_11670	COG1263	PTS System
AT726_11670	COG2190	(PTS) system
AT726_11680	COG3344	reverse transcriptase
AT726_11710	COG0366	Alpha amylase catalytic
AT726_11745	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
AT726_11750	COG3326	Membrane
AT726_11760	COG2827	Endonuclease containing a URI domain
AT726_11770	COG0534	Mate efflux family protein
AT726_11780	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
AT726_11790	COG0737	Belongs to the 5'-nucleotidase family
AT726_11820	COG1278	Cold shock
AT726_11850	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
AT726_11870	COG1115	amino acid carrier protein
AT726_11880	COG1307	EDD domain protein, DegV family
AT726_11885	COG1671	Belongs to the UPF0178 family
AT726_11890	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
AT726_11895	COG4129	membrane
AT726_11905	COG1550	Protein conserved in bacteria
AT726_11910	COG0628	permease
AT726_11915	COG0534	Mate efflux family protein
AT726_11920	COG1522	sequence-specific DNA binding
AT726_11925	COG0436	Aminotransferase
AT726_11930	COG0596	Alpha beta hydrolase
AT726_11935	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
AT726_11945	COG4377	Putative membrane peptidase family (DUF2324)
AT726_11950	COG0640	Transcriptional regulator
AT726_11960	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
AT726_11990	COG0180	Tryptophanyl-tRNA synthetase
AT726_12005	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
AT726_12015	COG0473	3-isopropylmalate dehydrogenase activity
AT726_12080	COG0789	Transcriptional regulator
AT726_12085	COG0656	L-ascorbic acid biosynthetic process
AT726_12130	COG3328	transposase activity
AT726_12140	COG5002	protein histidine kinase activity
AT726_12220	COG0534	Mate efflux family protein
AT726_12245	COG1331	Highly conserved protein containing a thioredoxin domain
AT726_12260	COG1028	Short-chain dehydrogenase reductase Sdr
AT726_12265	COG0367	asparagine synthase
AT726_12270	COG3863	Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family
AT726_12280	COG0252	asparaginase activity
AT726_12290	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
AT726_12295	COG4120	Belongs to the binding-protein-dependent transport system permease family
AT726_12310	COG0723	plastoquinol--plastocyanin reductase activity
AT726_12310	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
AT726_12325	COG0733	neurotransmitter:sodium symporter activity
AT726_12345	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
AT726_12350	COG3706	GGDEF domain
AT726_12375	COG4974	Belongs to the 'phage' integrase family
AT726_12390	COG1523	belongs to the glycosyl hydrolase 13 family
AT726_12410	COG0438	transferase activity, transferring glycosyl groups
AT726_12415	COG0463	Glycosyl transferase, family 2
AT726_12420	COG0438	transferase activity, transferring glycosyl groups
AT726_12430	COG1028	Short-chain dehydrogenase reductase Sdr