locus-tag class description UNDYM_0001 PF00308 Bacterial dnaA protein UNDYM_0001 PF11638 DnaA N-terminal domain UNDYM_0001 PF08299 Bacterial dnaA protein helix-turn-helix UNDYM_0002 PF02767 DNA polymerase III beta subunit, central domain UNDYM_0002 PF00712 DNA polymerase III beta subunit, N-terminal domain UNDYM_0002 PF02768 DNA polymerase III beta subunit, C-terminal domain UNDYM_0003 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UNDYM_0003 PF01751 Toprim domain UNDYM_0003 PF00986 DNA gyrase B subunit, carboxyl terminus UNDYM_0003 PF18053 DNA gyrase B subunit insert domain UNDYM_0003 PF00204 DNA gyrase B UNDYM_0005 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) UNDYM_0007 PF00574 Clp protease UNDYM_0008 PF07687 Peptidase dimerisation domain UNDYM_0008 PF01546 Peptidase family M20/M25/M40 UNDYM_0010 PF00528 Binding-protein-dependent transport system inner membrane component UNDYM_0011 PF00528 Binding-protein-dependent transport system inner membrane component UNDYM_0011 PF12911 N-terminal TM domain of oligopeptide transport permease C UNDYM_0012 PF08352 Oligopeptide/dipeptide transporter, C-terminal region UNDYM_0012 PF00005 ABC transporter UNDYM_0013 PF08352 Oligopeptide/dipeptide transporter, C-terminal region UNDYM_0013 PF00005 ABC transporter UNDYM_0015 PF05139 Erythromycin esterase UNDYM_0018 PF05675 Protein of unknown function (DUF817) UNDYM_0020 PF13609 Gram-negative porin UNDYM_0021 PF04542 Sigma-70 region 2 UNDYM_0021 PF08281 Sigma-70, region 4 UNDYM_0021 PF12680 SnoaL-like domain UNDYM_0022 PF02627 Carboxymuconolactone decarboxylase family UNDYM_0024 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit UNDYM_0028 PF00132 Bacterial transferase hexapeptide (six repeats) UNDYM_0031 PF12833 Helix-turn-helix domain UNDYM_0031 PF02311 AraC-like ligand binding domain UNDYM_0032 PF01266 FAD dependent oxidoreductase UNDYM_0032 PF05690 Thiazole biosynthesis protein ThiG UNDYM_0033 PF00962 Adenosine/AMP deaminase UNDYM_0034 PF12091 Protein of unknown function (DUF3567) UNDYM_0036 PF02954 Bacterial regulatory protein, Fis family UNDYM_0036 PF00158 Sigma-54 interaction domain UNDYM_0036 PF00072 Response regulator receiver domain UNDYM_0037 PF00512 His Kinase A (phospho-acceptor) domain UNDYM_0037 PF00989 PAS fold UNDYM_0037 PF00672 HAMP domain UNDYM_0037 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UNDYM_0040 PF01189 16S rRNA methyltransferase RsmB/F UNDYM_0040 PF01029 NusB family UNDYM_0041 PF01029 NusB family UNDYM_0041 PF01189 16S rRNA methyltransferase RsmB/F UNDYM_0042 PF12146 Serine aminopeptidase, S33 UNDYM_0047 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UNDYM_0047 PF00672 HAMP domain UNDYM_0047 PF18698 Histidine kinase sensor domain UNDYM_0047 PF00512 His Kinase A (phospho-acceptor) domain UNDYM_0047 PF00989 PAS fold UNDYM_0051 PF01078 Magnesium chelatase, subunit ChlI UNDYM_0051 PF13335 Magnesium chelatase, subunit ChlI C-terminal UNDYM_0052 PF04380 Membrane fusogenic activity UNDYM_0054 PF00543 Nitrogen regulatory protein P-II UNDYM_0056 PF00909 Ammonium Transporter Family UNDYM_0061 PF00563 EAL domain UNDYM_0061 PF00990 Diguanylate cyclase, GGDEF domain UNDYM_0061 PF08448 PAS fold UNDYM_0063 PF01212 Beta-eliminating lyase UNDYM_0067 PF01590 GAF domain UNDYM_0067 PF00158 Sigma-54 interaction domain UNDYM_0077 PF03412 Peptidase C39 family UNDYM_0077 PF00664 ABC transporter transmembrane region UNDYM_0077 PF00005 ABC transporter UNDYM_0081 PF00069 Protein kinase domain UNDYM_0081 PF03793 PASTA domain UNDYM_0082 PF09186 Domain of unknown function (DUF1949) UNDYM_0082 PF01205 Uncharacterized protein family UPF0029 UNDYM_0083 PF01791 DeoC/LacD family aldolase UNDYM_0084 PF00591 Glycosyl transferase family, a/b domain UNDYM_0084 PF02885 Glycosyl transferase family, helical bundle domain UNDYM_0084 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain UNDYM_0085 PF01048 Phosphorylase superfamily UNDYM_0087 PF00005 ABC transporter UNDYM_0087 PF12848 ABC transporter UNDYM_0088 PF03922 OmpW family UNDYM_0090 PF00005 ABC transporter UNDYM_0091 PF02687 FtsX-like permease family UNDYM_0091 PF12704 MacB-like periplasmic core domain UNDYM_0091 PF00005 ABC transporter UNDYM_0092 PF02687 FtsX-like permease family UNDYM_0092 PF12704 MacB-like periplasmic core domain UNDYM_0092 PF00005 ABC transporter UNDYM_0093 PF00158 Sigma-54 interaction domain UNDYM_0093 PF00072 Response regulator receiver domain UNDYM_0093 PF02954 Bacterial regulatory protein, Fis family UNDYM_0094 PF00672 HAMP domain UNDYM_0094 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UNDYM_0094 PF00989 PAS fold UNDYM_0094 PF00512 His Kinase A (phospho-acceptor) domain UNDYM_0097 PF00557 Metallopeptidase family M24 UNDYM_0097 PF01321 Creatinase/Prolidase N-terminal domain UNDYM_0098 PF05544 Proline racemase UNDYM_0099 PF00593 TonB dependent receptor UNDYM_0099 PF07715 TonB-dependent Receptor Plug Domain UNDYM_0103 PF00069 Protein kinase domain UNDYM_0105 PF00557 Metallopeptidase family M24 UNDYM_0105 PF01321 Creatinase/Prolidase N-terminal domain UNDYM_0106 PF07715 TonB-dependent Receptor Plug Domain UNDYM_0106 PF00593 TonB dependent receptor UNDYM_0107 PF08453 Peptidase family M9 N-terminal UNDYM_0107 PF01752 Collagenase UNDYM_0114 PF00563 EAL domain UNDYM_0114 PF00990 Diguanylate cyclase, GGDEF domain UNDYM_0114 PF03707 Bacterial signalling protein N terminal repeat UNDYM_0115 PF03707 Bacterial signalling protein N terminal repeat UNDYM_0115 PF00990 Diguanylate cyclase, GGDEF domain UNDYM_0115 PF00563 EAL domain UNDYM_0117 PF00990 Diguanylate cyclase, GGDEF domain UNDYM_0119 PF01037 Lrp/AsnC ligand binding domain UNDYM_0120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UNDYM_0120 PF03466 LysR substrate binding domain UNDYM_0121 PF07694 5TMR of 5TMR-LYT UNDYM_0121 PF13492 GAF domain UNDYM_0121 PF06580 Histidine kinase UNDYM_0121 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UNDYM_0122 PF04397 LytTr DNA-binding domain UNDYM_0122 PF00072 Response regulator receiver domain UNDYM_0126 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UNDYM_0126 PF03466 LysR substrate binding domain UNDYM_0127 PF01547 Bacterial extracellular solute-binding protein UNDYM_0128 PF00528 Binding-protein-dependent transport system inner membrane component UNDYM_0129 PF00528 Binding-protein-dependent transport system inner membrane component UNDYM_0130 PF00005 ABC transporter UNDYM_0130 PF17912 MalK OB fold domain UNDYM_0131 PF00356 Bacterial regulatory proteins, lacI family UNDYM_0132 PF00232 Glycosyl hydrolase family 1 UNDYM_0133 PF07715 TonB-dependent Receptor Plug Domain UNDYM_0133 PF00593 TonB dependent receptor UNDYM_0134 PF00722 Glycosyl hydrolases family 16 UNDYM_0135 PF01915 Glycosyl hydrolase family 3 C-terminal domain UNDYM_0135 PF00933 Glycosyl hydrolase family 3 N terminal domain UNDYM_0135 PF14310 Fibronectin type III-like domain UNDYM_0136 PF01380 SIS domain UNDYM_0136 PF01418 Helix-turn-helix domain, rpiR family UNDYM_0136 PF02685 Glucokinase UNDYM_0137 PF07690 Major Facilitator Superfamily UNDYM_0140 PF02310 B12 binding domain UNDYM_0140 PF01642 Methylmalonyl-CoA mutase UNDYM_0149 PF00072 Response regulator receiver domain UNDYM_0149 PF09456 RcsC Alpha-Beta-Loop (ABL) UNDYM_0149 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UNDYM_0149 PF00512 His Kinase A (phospho-acceptor) domain UNDYM_0150 PF08274 PhnA Zinc-Ribbon UNDYM_0150 PF03831 PhnA domain UNDYM_0154 PF00667 FAD binding domain UNDYM_0154 PF00258 Flavodoxin UNDYM_0154 PF00175 Oxidoreductase NAD-binding domain UNDYM_0155 PF02424 ApbE family UNDYM_0159 PF12804 MobA-like NTP transferase domain UNDYM_0159 PF14602 Hexapeptide repeat of succinyl-transferase UNDYM_0159 PF00132 Bacterial transferase hexapeptide (six repeats) UNDYM_0161 PF13609 Gram-negative porin UNDYM_0162 PF00106 short chain dehydrogenase UNDYM_0163 PF00596 Class II Aldolase and Adducin N-terminal domain UNDYM_0168 PF01037 Lrp/AsnC ligand binding domain UNDYM_0169 PF01380 SIS domain UNDYM_0171 PF00561 alpha/beta hydrolase fold UNDYM_0172 PF03390 2-hydroxycarboxylate transporter family UNDYM_0173 PF00694 Aconitase C-terminal domain UNDYM_0174 PF00330 Aconitase family (aconitate hydratase) UNDYM_0175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UNDYM_0175 PF03466 LysR substrate binding domain UNDYM_0180 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding UNDYM_0180 PF18381 YcaO cyclodehydratase C-terminal domain UNDYM_0181 PF00557 Metallopeptidase family M24 UNDYM_0184 PF00196 Bacterial regulatory proteins, luxR family UNDYM_0184 PF00072 Response regulator receiver domain UNDYM_0185 PF07730 Histidine kinase UNDYM_0185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UNDYM_0187 PF00990 Diguanylate cyclase, GGDEF domain UNDYM_0187 PF05230 MASE2 domain UNDYM_0188 PF00392 Bacterial regulatory proteins, gntR family UNDYM_0188 PF00155 Aminotransferase class I and II UNDYM_0195 PF00005 ABC transporter UNDYM_0197 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UNDYM_0197 PF03466 LysR substrate binding domain UNDYM_0203 PF01053 Cys/Met metabolism PLP-dependent enzyme UNDYM_0204 PF00672 HAMP domain UNDYM_0204 PF00512 His Kinase A (phospho-acceptor) domain UNDYM_0204 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UNDYM_0204 PF13426 PAS domain UNDYM_0207 PF00132 Bacterial transferase hexapeptide (six repeats) UNDYM_0209 PF00266 Aminotransferase class-V UNDYM_0210 PF00440 Bacterial regulatory proteins, tetR family UNDYM_0210 PF13305 Tetracyclin repressor-like, C-terminal domain UNDYM_0211 PF00561 alpha/beta hydrolase fold UNDYM_0212 PF07690 Major Facilitator Superfamily UNDYM_0213 PF01323 DSBA-like thioredoxin domain UNDYM_0219 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family UNDYM_0222 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family UNDYM_0222 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain UNDYM_0223 PF02540 NAD synthase UNDYM_0223 PF00795 Carbon-nitrogen hydrolase UNDYM_0224 PF01467 Cytidylyltransferase-like UNDYM_0224 PF00293 NUDIX domain UNDYM_0226 PF08521 Two-component sensor kinase N-terminal UNDYM_0226 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UNDYM_0226 PF00512 His Kinase A (phospho-acceptor) domain UNDYM_0227 PF00072 Response regulator receiver domain UNDYM_0227 PF00486 Transcriptional regulatory protein, C terminal UNDYM_0228 PF01292 Prokaryotic cytochrome b561 UNDYM_0229 PF01370 NAD dependent epimerase/dehydratase family UNDYM_0230 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus UNDYM_0230 PF08666 SAF domain UNDYM_0231 PF00392 Bacterial regulatory proteins, gntR family UNDYM_0231 PF07729 FCD domain UNDYM_0232 PF07715 TonB-dependent Receptor Plug Domain UNDYM_0232 PF00593 TonB dependent receptor UNDYM_0234 PF00295 Glycosyl hydrolases family 28 UNDYM_0237 PF07690 Major Facilitator Superfamily UNDYM_0238 PF00171 Aldehyde dehydrogenase family UNDYM_0239 PF00701 Dihydrodipicolinate synthetase family UNDYM_0240 PF00392 Bacterial regulatory proteins, gntR family UNDYM_0240 PF07729 FCD domain UNDYM_0244 PF13180 PDZ domain UNDYM_0246 PF00909 Ammonium Transporter Family UNDYM_0250 PF03060 Nitronate monooxygenase UNDYM_0251 PF05971 RNA methyltransferase UNDYM_0253 PF01037 Lrp/AsnC ligand binding domain UNDYM_0255 PF13411 MerR HTH family regulatory protein UNDYM_0257 PF00486 Transcriptional regulatory protein, C terminal UNDYM_0257 PF00072 Response regulator receiver domain UNDYM_0258 PF00512 His Kinase A (phospho-acceptor) domain UNDYM_0258 PF00672 HAMP domain UNDYM_0258 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UNDYM_0260 PF00265 Thymidine kinase UNDYM_0261 PF00011 Hsp20/alpha crystallin family UNDYM_0263 PF01070 FMN-dependent dehydrogenase UNDYM_0264 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UNDYM_0264 PF03466 LysR substrate binding domain UNDYM_0265 PF04209 homogentisate 1,2-dioxygenase UNDYM_0269 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UNDYM_0269 PF03466 LysR substrate binding domain UNDYM_0270 PF00593 TonB dependent receptor UNDYM_0270 PF07715 TonB-dependent Receptor Plug Domain UNDYM_0273 PF12399 Branched-chain amino acid ATP-binding cassette transporter UNDYM_0273 PF00005 ABC transporter UNDYM_0274 PF00005 ABC transporter UNDYM_0278 PF13302 Acetyltransferase (GNAT) domain UNDYM_0280 PF03466 LysR substrate binding domain UNDYM_0280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UNDYM_0281 PF02525 Flavodoxin-like fold UNDYM_0282 PF02678 Pirin UNDYM_0282 PF05726 Pirin C-terminal cupin domain UNDYM_0284 PF00005 ABC transporter UNDYM_0286 PF00528 Binding-protein-dependent transport system inner membrane component UNDYM_0288 PF06299 Protein of unknown function (DUF1045) UNDYM_0289 PF07969 Amidohydrolase family UNDYM_0290 PF06754 Phosphonate metabolism protein PhnG UNDYM_0291 PF05845 Bacterial phosphonate metabolism protein (PhnH) UNDYM_0292 PF05861 Bacterial phosphonate metabolism protein (PhnI) UNDYM_0293 PF06007 Phosphonate metabolism protein PhnJ UNDYM_0294 PF00005 ABC transporter UNDYM_0295 PF00005 ABC transporter UNDYM_0296 PF07969 Amidohydrolase family UNDYM_0297 PF01171 PP-loop family UNDYM_0302 PF00072 Response regulator receiver domain UNDYM_0304 PF01810 LysE type translocator UNDYM_0307 PF03960 ArsC family UNDYM_0308 PF01169 Uncharacterized protein family UPF0016 UNDYM_0310 PF02308 MgtC family UNDYM_0311 PF17932 Tetracyclin repressor-like, C-terminal domain UNDYM_0311 PF00440 Bacterial regulatory proteins, tetR family UNDYM_0312 PF03144 Elongation factor Tu domain 2 UNDYM_0312 PF00009 Elongation factor Tu GTP binding domain UNDYM_0312 PF03143 Elongation factor Tu C-terminal domain UNDYM_0314 PF00467 KOW motif UNDYM_0314 PF02357 Transcription termination factor nusG UNDYM_0315 PF03946 Ribosomal protein L11, N-terminal domain UNDYM_0315 PF00298 Ribosomal protein L11, RNA binding domain UNDYM_0316 PF00687 Ribosomal protein L1p/L10e family UNDYM_0317 PF00466 Ribosomal protein L10 UNDYM_0318 PF16320 Ribosomal protein L7/L12 dimerisation domain UNDYM_0318 PF00542 Ribosomal protein L7/L12 C-terminal domain UNDYM_0319 PF04565 RNA polymerase Rpb2, domain 3 UNDYM_0319 PF00562 RNA polymerase Rpb2, domain 6 UNDYM_0319 PF10385 RNA polymerase beta subunit external 1 domain UNDYM_0319 PF04563 RNA polymerase beta subunit UNDYM_0319 PF04561 RNA polymerase Rpb2, domain 2 UNDYM_0319 PF04560 RNA polymerase Rpb2, domain 7 UNDYM_0320 PF04997 RNA polymerase Rpb1, domain 1 UNDYM_0320 PF05000 RNA polymerase Rpb1, domain 4 UNDYM_0320 PF00623 RNA polymerase Rpb1, domain 2 UNDYM_0320 PF04983 RNA polymerase Rpb1, domain 3 UNDYM_0320 PF04998 RNA polymerase Rpb1, domain 5 UNDYM_0321 PF02237 Biotin protein ligase C terminal domain UNDYM_0321 PF03099 Biotin/lipoate A/B protein ligase family UNDYM_0322 PF03309 Type III pantothenate kinase UNDYM_0326 PF01614 Bacterial transcriptional regulator UNDYM_0326 PF09339 IclR helix-turn-helix domain UNDYM_0328 PF01979 Amidohydrolase family UNDYM_0330 PF00793 DAHP synthetase I family UNDYM_0334 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain UNDYM_0334 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain UNDYM_0335 PF01037 Lrp/AsnC ligand binding domain UNDYM_0337 PF00578 AhpC/TSA family UNDYM_0338 PF03358 NADPH-dependent FMN reductase UNDYM_0339 PF07238 PilZ domain UNDYM_0339 PF07317 Flagellar regulator YcgR UNDYM_0340 PF00689 Cation transporting ATPase, C-terminus UNDYM_0340 PF00690 Cation transporter/ATPase, N-terminus UNDYM_0341 PF12833 Helix-turn-helix domain UNDYM_0342 PF02653 Branched-chain amino acid transport system / permease component UNDYM_0342 PF11862 Domain of unknown function (DUF3382) UNDYM_0344 PF00768 D-alanyl-D-alanine carboxypeptidase UNDYM_0345 PF00593 TonB dependent receptor UNDYM_0345 PF07715 TonB-dependent Receptor Plug Domain UNDYM_0346 PF00144 Beta-lactamase UNDYM_0349 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal UNDYM_0349 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III UNDYM_0350 PF00756 Putative esterase UNDYM_0351 PF00107 Zinc-binding dehydrogenase UNDYM_0351 PF08240 Alcohol dehydrogenase GroES-like domain UNDYM_0352 PF01965 DJ-1/PfpI family UNDYM_0352 PF12833 Helix-turn-helix domain UNDYM_0356 PF01595 Cyclin M transmembrane N-terminal domain UNDYM_0356 PF03471 Transporter associated domain UNDYM_0356 PF00571 CBS domain UNDYM_0357 PF00563 EAL domain UNDYM_0357 PF03707 Bacterial signalling protein N terminal repeat UNDYM_0357 PF00990 Diguanylate cyclase, GGDEF domain UNDYM_0358 PF00365 Phosphofructokinase UNDYM_0360 PF00753 Metallo-beta-lactamase superfamily UNDYM_0362 PF01022 Bacterial regulatory protein, arsR family UNDYM_0364 PF00873 AcrB/AcrD/AcrF family UNDYM_0368 PF11871 Domain of unknown function (DUF3391) UNDYM_0368 PF01966 HD domain UNDYM_0369 PF00392 Bacterial regulatory proteins, gntR family UNDYM_0369 PF07729 FCD domain UNDYM_0370 PF03480 Bacterial extracellular solute-binding protein, family 7 UNDYM_0372 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component UNDYM_0373 PF16957 Malonate decarboxylase, alpha subunit, transporter UNDYM_0374 PF06857 Malonate decarboxylase delta subunit (MdcD) UNDYM_0375 PF01039 Carboxyl transferase domain UNDYM_0377 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG UNDYM_0378 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase UNDYM_0381 PF01176 Translation initiation factor 1A / IF-1 UNDYM_0385 PF00753 Metallo-beta-lactamase superfamily UNDYM_0387 PF01494 FAD binding domain UNDYM_0393 PF00144 Beta-lactamase UNDYM_0394 PF00561 alpha/beta hydrolase fold UNDYM_0395 PF12833 Helix-turn-helix domain UNDYM_0397 PF04055 Radical SAM superfamily UNDYM_0398 PF03099 Biotin/lipoate A/B protein ligase family UNDYM_0399 PF02567 Phenazine biosynthesis-like protein UNDYM_0400 PF00857 Isochorismatase family UNDYM_0402 PF03466 LysR substrate binding domain UNDYM_0402 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UNDYM_0403 PF04359 Protein of unknown function (DUF493) UNDYM_0404 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UNDYM_0404 PF03466 LysR substrate binding domain UNDYM_0406 PF01063 Amino-transferase class IV UNDYM_0407 PF07943 Penicillin-binding protein 5, C-terminal domain UNDYM_0407 PF00768 D-alanyl-D-alanine carboxypeptidase UNDYM_0408 PF02129 X-Pro dipeptidyl-peptidase (S15 family) UNDYM_0413 PF00005 ABC transporter UNDYM_0414 PF02405 Permease MlaE UNDYM_0415 PF00884 Sulfatase UNDYM_0416 PF00164 Ribosomal protein S12/S23 UNDYM_0417 PF00177 Ribosomal protein S7p/S5e UNDYM_0418 PF00009 Elongation factor Tu GTP binding domain UNDYM_0418 PF14492 Elongation Factor G, domain II UNDYM_0418 PF00679 Elongation factor G C-terminus UNDYM_0418 PF03764 Elongation factor G, domain IV UNDYM_0418 PF03144 Elongation factor Tu domain 2 UNDYM_0419 PF00009 Elongation factor Tu GTP binding domain UNDYM_0419 PF03144 Elongation factor Tu domain 2 UNDYM_0419 PF03143 Elongation factor Tu C-terminal domain UNDYM_0420 PF00338 Ribosomal protein S10p/S20e UNDYM_0421 PF00297 Ribosomal protein L3 UNDYM_0422 PF00573 Ribosomal protein L4/L1 family UNDYM_0423 PF00276 Ribosomal protein L23 UNDYM_0424 PF00181 Ribosomal Proteins L2, RNA binding domain UNDYM_0424 PF03947 Ribosomal Proteins L2, C-terminal domain UNDYM_0425 PF00203 Ribosomal protein S19 UNDYM_0426 PF00237 Ribosomal protein L22p/L17e UNDYM_0427 PF00189 Ribosomal protein S3, C-terminal domain UNDYM_0427 PF07650 KH domain UNDYM_0428 PF00252 Ribosomal protein L16p/L10e UNDYM_0429 PF00831 Ribosomal L29 protein UNDYM_0430 PF00366 Ribosomal protein S17 UNDYM_0431 PF00238 Ribosomal protein L14p/L23e UNDYM_0432 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 UNDYM_0433 PF00281 Ribosomal protein L5 UNDYM_0433 PF00673 ribosomal L5P family C-terminus UNDYM_0434 PF00253 Ribosomal protein S14p/S29e UNDYM_0435 PF00410 Ribosomal protein S8 UNDYM_0436 PF00347 Ribosomal protein L6 UNDYM_0437 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast UNDYM_0438 PF03719 Ribosomal protein S5, C-terminal domain UNDYM_0438 PF00333 Ribosomal protein S5, N-terminal domain UNDYM_0439 PF00327 Ribosomal protein L30p/L7e UNDYM_0440 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A UNDYM_0441 PF00344 SecY translocase UNDYM_0442 PF01176 Translation initiation factor 1A / IF-1 UNDYM_0443 PF00416 Ribosomal protein S13/S18 UNDYM_0444 PF00411 Ribosomal protein S11 UNDYM_0445 PF00163 Ribosomal protein S4/S9 N-terminal domain UNDYM_0445 PF01479 S4 domain UNDYM_0446 PF01000 RNA polymerase Rpb3/RpoA insert domain UNDYM_0446 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain UNDYM_0446 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain UNDYM_0447 PF01196 Ribosomal protein L17 UNDYM_0449 PF02683 Cytochrome C biogenesis protein transmembrane region UNDYM_0449 PF11412 Disulphide bond corrector protein DsbC UNDYM_0450 PF10417 C-terminal domain of 1-Cys peroxiredoxin UNDYM_0450 PF00578 AhpC/TSA family UNDYM_0451 PF08411 Exonuclease C-terminal UNDYM_0451 PF00929 Exonuclease UNDYM_0452 PF01544 CorA-like Mg2+ transporter protein UNDYM_0453 PF04116 Fatty acid hydroxylase superfamily UNDYM_0454 PF07947 YhhN family UNDYM_0455 PF00490 Delta-aminolevulinic acid dehydratase UNDYM_0456 PF01926 50S ribosome-binding GTPase UNDYM_0457 PF00034 Cytochrome c UNDYM_0458 PF05140 ResB-like family UNDYM_0459 PF01578 Cytochrome C assembly protein UNDYM_0460 PF00174 Oxidoreductase molybdopterin binding domain UNDYM_0461 PF01794 Ferric reductase like transmembrane component UNDYM_0463 PF01491 Frataxin-like domain UNDYM_0464 PF00905 Penicillin binding protein transpeptidase domain UNDYM_0464 PF00912 Transglycosylase UNDYM_0464 PF17092 Penicillin-binding protein OB-like domain UNDYM_0469 PF11741 AMIN domain UNDYM_0469 PF00263 Bacterial type II and III secretion system protein UNDYM_0469 PF07660 Secretin and TonB N terminus short domain UNDYM_0469 PF03958 Bacterial type II/III secretion system short domain UNDYM_0471 PF01761 3-dehydroquinate synthase UNDYM_0472 PF13286 Phosphohydrolase-associated domain UNDYM_0472 PF01966 HD domain UNDYM_0476 PF00005 ABC transporter UNDYM_0476 PF12399 Branched-chain amino acid ATP-binding cassette transporter UNDYM_0477 PF00005 ABC transporter UNDYM_0479 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain UNDYM_0479 PF00378 Enoyl-CoA hydratase/isomerase UNDYM_0479 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain UNDYM_0480 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein UNDYM_0481 PF04552 Sigma-54, DNA binding domain UNDYM_0481 PF00309 Sigma-54 factor, Activator interacting domain (AID) UNDYM_0481 PF04963 Sigma-54 factor, core binding domain UNDYM_0482 PF00005 ABC transporter UNDYM_0482 PF12399 Branched-chain amino acid ATP-binding cassette transporter UNDYM_0486 PF01380 SIS domain UNDYM_0486 PF00571 CBS domain UNDYM_0487 PF02254 TrkA-N domain UNDYM_0487 PF02080 TrkA-C domain UNDYM_0487 PF00999 Sodium/hydrogen exchanger family UNDYM_0488 PF00156 Phosphoribosyl transferase domain UNDYM_0490 PF05221 S-adenosyl-L-homocysteine hydrolase UNDYM_0490 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain UNDYM_0491 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV UNDYM_0492 PF02219 Methylenetetrahydrofolate reductase UNDYM_0496 PF01037 Lrp/AsnC ligand binding domain UNDYM_0497 PF01053 Cys/Met metabolism PLP-dependent enzyme UNDYM_0500 PF00905 Penicillin binding protein transpeptidase domain UNDYM_0500 PF17092 Penicillin-binding protein OB-like domain UNDYM_0500 PF00912 Transglycosylase UNDYM_0501 PF00005 ABC transporter UNDYM_0501 PF00664 ABC transporter transmembrane region UNDYM_0502 PF00664 ABC transporter transmembrane region UNDYM_0502 PF00005 ABC transporter UNDYM_0504 PF00672 HAMP domain UNDYM_0504 PF07228 Stage II sporulation protein E (SpoIIE) UNDYM_0508 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain UNDYM_0508 PF00326 Prolyl oligopeptidase family UNDYM_0509 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UNDYM_0509 PF00672 HAMP domain UNDYM_0509 PF00512 His Kinase A (phospho-acceptor) domain UNDYM_0514 PF13533 Biotin-lipoyl like UNDYM_0519 PF03412 Peptidase C39 family UNDYM_0519 PF00664 ABC transporter transmembrane region UNDYM_0519 PF00005 ABC transporter UNDYM_0521 PF07722 Peptidase C26 UNDYM_0523 PF04107 Glutamate-cysteine ligase family 2(GCS2) UNDYM_0524 PF02824 TGS domain UNDYM_0524 PF13291 ACT domain UNDYM_0524 PF04607 Region found in RelA / SpoT proteins UNDYM_0525 PF00857 Isochorismatase family UNDYM_0527 PF06123 Inner membrane protein CreD UNDYM_0528 PF00672 HAMP domain UNDYM_0528 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UNDYM_0528 PF00512 His Kinase A (phospho-acceptor) domain UNDYM_0529 PF00486 Transcriptional regulatory protein, C terminal UNDYM_0529 PF00072 Response regulator receiver domain UNDYM_0530 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region UNDYM_0531 PF00990 Diguanylate cyclase, GGDEF domain UNDYM_0531 PF17151 Periplasmic sensor domain UNDYM_0534 PF01156 Inosine-uridine preferring nucleoside hydrolase UNDYM_0539 PF00294 pfkB family carbohydrate kinase UNDYM_0541 PF01177 Asp/Glu/Hydantoin racemase UNDYM_0549 PF00294 pfkB family carbohydrate kinase UNDYM_0550 PF04227 Indigoidine synthase A like protein UNDYM_0557 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) UNDYM_0560 PF02633 Creatinine amidohydrolase UNDYM_0561 PF07237 Protein of unknown function (DUF1428) UNDYM_0563 PF03466 LysR substrate binding domain UNDYM_0563 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UNDYM_0567 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UNDYM_0567 PF03466 LysR substrate binding domain UNDYM_0570 PF03466 LysR substrate binding domain UNDYM_0570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UNDYM_0572 PF00149 Calcineurin-like phosphoesterase UNDYM_0576 PF00144 Beta-lactamase UNDYM_0580 PF00553 Cellulose binding domain UNDYM_0580 PF00704 Glycosyl hydrolases family 18 UNDYM_0580 PF00041 Fibronectin type III domain UNDYM_0582 PF00704 Glycosyl hydrolases family 18 UNDYM_0582 PF00041 Fibronectin type III domain UNDYM_0587 PF00264 Common central domain of tyrosinase UNDYM_0591 PF00665 Integrase core domain UNDYM_0594 PF00154 recA bacterial DNA recombination protein UNDYM_0595 PF02631 RecX family UNDYM_0597 PF00549 CoA-ligase UNDYM_0597 PF08442 ATP-grasp domain UNDYM_0598 PF02629 CoA binding domain UNDYM_0598 PF00549 CoA-ligase UNDYM_0601 PF07963 Prokaryotic N-terminal methylation motif UNDYM_0601 PF00114 Pilin (bacterial filament) UNDYM_0602 PF07963 Prokaryotic N-terminal methylation motif UNDYM_0602 PF00114 Pilin (bacterial filament) UNDYM_0603 PF00114 Pilin (bacterial filament) UNDYM_0603 PF07963 Prokaryotic N-terminal methylation motif UNDYM_0604 PF00114 Pilin (bacterial filament) UNDYM_0604 PF07963 Prokaryotic N-terminal methylation motif UNDYM_0606 PF00114 Pilin (bacterial filament) UNDYM_0606 PF07963 Prokaryotic N-terminal methylation motif UNDYM_0608 PF14693 Ribosomal protein TL5, C-terminal domain UNDYM_0608 PF01386 Ribosomal L25p family UNDYM_0609 PF14572 Phosphoribosyl synthetase-associated domain UNDYM_0609 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase UNDYM_0610 PF08544 GHMP kinases C terminal UNDYM_0610 PF00288 GHMP kinases N terminal domain UNDYM_0611 PF03550 Outer membrane lipoprotein LolB UNDYM_0613 PF06827 Zinc finger found in FPG and IleRS UNDYM_0613 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain UNDYM_0613 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain UNDYM_0618 PF00005 ABC transporter UNDYM_0619 PF12679 ABC-2 family transporter protein UNDYM_0622 PF13302 Acetyltransferase (GNAT) domain UNDYM_0622 PF00958 GMP synthase C terminal domain UNDYM_0622 PF13673 Acetyltransferase (GNAT) domain UNDYM_0622 PF00117 Glutamine amidotransferase class-I UNDYM_0622 PF03352 Methyladenine glycosylase UNDYM_0629 PF14403 Circularly permuted ATP-grasp type 2 UNDYM_0632 PF02548 Ketopantoate hydroxymethyltransferase UNDYM_0634 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) UNDYM_0635 PF01743 Poly A polymerase head domain UNDYM_0635 PF12626 Polymerase A arginine-rich C-terminus UNDYM_0635 PF12627 Probable RNA and SrmB- binding site of polymerase A UNDYM_0637 PF00308 Bacterial dnaA protein UNDYM_0638 PF01594 AI-2E family transporter UNDYM_0639 PF02769 AIR synthase related protein, C-terminal domain UNDYM_0639 PF00586 AIR synthase related protein, N-terminal domain UNDYM_0647 PF03668 P-loop ATPase protein family UNDYM_0648 PF07475 HPr Serine kinase C-terminal domain UNDYM_0648 PF02603 HPr Serine kinase N terminus UNDYM_0649 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 UNDYM_0650 PF03707 Bacterial signalling protein N terminal repeat UNDYM_0650 PF00990 Diguanylate cyclase, GGDEF domain UNDYM_0650 PF00563 EAL domain UNDYM_0652 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term UNDYM_0652 PF14489 QueF-like protein UNDYM_0653 PF00585 C-terminal regulatory domain of Threonine dehydratase UNDYM_0653 PF00291 Pyridoxal-phosphate dependent enzyme UNDYM_0654 PF09335 SNARE associated Golgi protein UNDYM_0658 PF00106 short chain dehydrogenase UNDYM_0663 PF00107 Zinc-binding dehydrogenase UNDYM_0663 PF16884 N-terminal domain of oxidoreductase UNDYM_0664 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UNDYM_0664 PF03466 LysR substrate binding domain UNDYM_0666 PF01209 ubiE/COQ5 methyltransferase family UNDYM_0669 PF03109 ABC1 family UNDYM_0672 PF13091 PLD-like domain UNDYM_0675 PF01470 Pyroglutamyl peptidase UNDYM_0679 PF04397 LytTr DNA-binding domain UNDYM_0679 PF00072 Response regulator receiver domain UNDYM_0680 PF00672 HAMP domain UNDYM_0680 PF06580 Histidine kinase UNDYM_0680 PF02743 Cache domain UNDYM_0680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UNDYM_0690 PF01613 Flavin reductase like domain UNDYM_0692 PF01037 Lrp/AsnC ligand binding domain UNDYM_0693 PF01810 LysE type translocator UNDYM_0700 PF00149 Calcineurin-like phosphoesterase UNDYM_0700 PF12320 Type 5 capsule protein repressor C-terminal domain UNDYM_0702 PF04389 Peptidase family M28 UNDYM_0702 PF04151 Bacterial pre-peptidase C-terminal domain UNDYM_0705 PF00474 Sodium:solute symporter family UNDYM_0708 PF01336 OB-fold nucleic acid binding domain UNDYM_0708 PF00152 tRNA synthetases class II (D, K and N) UNDYM_0708 PF02938 GAD domain UNDYM_0711 PF00293 NUDIX domain UNDYM_0712 PF03372 Endonuclease/Exonuclease/phosphatase family UNDYM_0713 PF13091 PLD-like domain UNDYM_0721 PF01479 S4 domain UNDYM_0723 PF02771 Acyl-CoA dehydrogenase, N-terminal domain UNDYM_0723 PF02770 Acyl-CoA dehydrogenase, middle domain UNDYM_0723 PF12806 Acetyl-CoA dehydrogenase C-terminal like UNDYM_0723 PF00441 Acyl-CoA dehydrogenase, C-terminal domain UNDYM_0724 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain UNDYM_0724 PF00378 Enoyl-CoA hydratase/isomerase UNDYM_0724 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain UNDYM_0725 PF02803 Thiolase, C-terminal domain UNDYM_0725 PF00108 Thiolase, N-terminal domain UNDYM_0727 PF00378 Enoyl-CoA hydratase/isomerase UNDYM_0728 PF01266 FAD dependent oxidoreductase UNDYM_0729 PF01042 Endoribonuclease L-PSP UNDYM_0733 PF00440 Bacterial regulatory proteins, tetR family UNDYM_0734 PF13378 Enolase C-terminal domain-like UNDYM_0734 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain UNDYM_0735 PF00593 TonB dependent receptor UNDYM_0735 PF07715 TonB-dependent Receptor Plug Domain UNDYM_0737 PF07690 Major Facilitator Superfamily UNDYM_0738 PF01557 Fumarylacetoacetate (FAA) hydrolase family UNDYM_0739 PF02558 Ketopantoate reductase PanE/ApbA UNDYM_0739 PF08546 Ketopantoate reductase PanE/ApbA C terminal UNDYM_0740 PF13193 AMP-binding enzyme C-terminal domain UNDYM_0740 PF00501 AMP-binding enzyme UNDYM_0743 PF02321 Outer membrane efflux protein UNDYM_0744 PF00873 AcrB/AcrD/AcrF family UNDYM_0745 PF00873 AcrB/AcrD/AcrF family UNDYM_0746 PF13533 Biotin-lipoyl like UNDYM_0748 PF06100 MCRA family UNDYM_0751 PF10091 Putative glucoamylase UNDYM_0751 PF06165 Glycosyltransferase family 36 UNDYM_0751 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain UNDYM_0753 PF05736 OprF membrane domain UNDYM_0753 PF00691 OmpA family UNDYM_0754 PF04972 BON domain UNDYM_0756 PF13091 PLD-like domain UNDYM_0756 PF13396 Phospholipase_D-nuclease N-terminal UNDYM_0757 PF00107 Zinc-binding dehydrogenase UNDYM_0757 PF08240 Alcohol dehydrogenase GroES-like domain UNDYM_0764 PF00691 OmpA family UNDYM_0764 PF01389 OmpA-like transmembrane domain UNDYM_0769 PF06956 Regulator of RNA terminal phosphate cyclase UNDYM_0769 PF00158 Sigma-54 interaction domain UNDYM_0772 PF01139 tRNA-splicing ligase RtcB UNDYM_0773 PF01137 RNA 3'-terminal phosphate cyclase UNDYM_0773 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain UNDYM_0775 PF01139 tRNA-splicing ligase RtcB UNDYM_0779 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain UNDYM_0779 PF00205 Thiamine pyrophosphate enzyme, central domain UNDYM_0779 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain UNDYM_0780 PF03707 Bacterial signalling protein N terminal repeat UNDYM_0780 PF00990 Diguanylate cyclase, GGDEF domain UNDYM_0780 PF00563 EAL domain UNDYM_0781 PF02381 MraZ protein, putative antitoxin-like UNDYM_0782 PF01795 MraW methylase family UNDYM_0784 PF00905 Penicillin binding protein transpeptidase domain UNDYM_0784 PF03717 Penicillin-binding Protein dimerisation domain UNDYM_0785 PF08245 Mur ligase middle domain UNDYM_0785 PF01225 Mur ligase family, catalytic domain UNDYM_0785 PF02875 Mur ligase family, glutamate ligase domain UNDYM_0786 PF08245 Mur ligase middle domain UNDYM_0786 PF01225 Mur ligase family, catalytic domain UNDYM_0786 PF02875 Mur ligase family, glutamate ligase domain UNDYM_0787 PF00953 Glycosyl transferase family 4 UNDYM_0787 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 UNDYM_0788 PF02875 Mur ligase family, glutamate ligase domain UNDYM_0788 PF08245 Mur ligase middle domain UNDYM_0789 PF01098 Cell cycle protein UNDYM_0790 PF03033 Glycosyltransferase family 28 N-terminal domain UNDYM_0790 PF04101 Glycosyltransferase family 28 C-terminal domain UNDYM_0791 PF01225 Mur ligase family, catalytic domain UNDYM_0791 PF08245 Mur ligase middle domain UNDYM_0791 PF02875 Mur ligase family, glutamate ligase domain UNDYM_0792 PF01820 D-ala D-ala ligase N-terminus UNDYM_0792 PF07478 D-ala D-ala ligase C-terminus UNDYM_0793 PF03799 Cell division protein FtsQ UNDYM_0793 PF08478 POTRA domain, FtsQ-type UNDYM_0794 PF02491 SHS2 domain inserted in FTSA UNDYM_0795 PF12327 FtsZ family, C-terminal domain UNDYM_0795 PF00091 Tubulin/FtsZ family, GTPase domain UNDYM_0796 PF08534 Redoxin UNDYM_0797 PF00583 Acetyltransferase (GNAT) family UNDYM_0798 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase UNDYM_0800 PF10145 Phage-related minor tail protein UNDYM_0800 PF01551 Peptidase family M23 UNDYM_0800 PF01464 Transglycosylase SLT domain UNDYM_0801 PF07516 SecA Wing and Scaffold domain UNDYM_0801 PF01043 SecA preprotein cross-linking domain UNDYM_0801 PF02810 SEC-C motif UNDYM_0801 PF07517 SecA DEAD-like domain UNDYM_0802 PF02771 Acyl-CoA dehydrogenase, N-terminal domain UNDYM_0802 PF02770 Acyl-CoA dehydrogenase, middle domain UNDYM_0802 PF00441 Acyl-CoA dehydrogenase, C-terminal domain UNDYM_0803 PF01960 ArgJ family UNDYM_0805 PF00293 NUDIX domain UNDYM_0807 PF00842 Alanine racemase, C-terminal domain UNDYM_0807 PF01168 Alanine racemase, N-terminal domain UNDYM_0808 PF01266 FAD dependent oxidoreductase UNDYM_0810 PF18024 Helix-turn-helix domain UNDYM_0810 PF00158 Sigma-54 interaction domain UNDYM_0811 PF03884 DNA gyrase inhibitor YacG UNDYM_0812 PF07072 Cell division protein UNDYM_0813 PF06750 Bacterial Peptidase A24 N-terminal domain UNDYM_0813 PF01478 Type IV leader peptidase family UNDYM_0814 PF00482 Type II secretion system (T2SS), protein F UNDYM_0815 PF00437 Type II/IV secretion system protein UNDYM_0815 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain UNDYM_0816 PF00348 Polyprenyl synthetase UNDYM_0817 PF00829 Ribosomal prokaryotic L21 protein UNDYM_0818 PF01016 Ribosomal L27 protein UNDYM_0819 PF01018 GTP1/OBG UNDYM_0819 PF01926 50S ribosome-binding GTPase UNDYM_0820 PF01472 PUA domain UNDYM_0820 PF00696 Amino acid kinase family UNDYM_0822 PF00293 NUDIX domain UNDYM_0823 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) UNDYM_0823 PF03129 Anticodon binding domain UNDYM_0823 PF04073 Aminoacyl-tRNA editing domain UNDYM_0824 PF01464 Transglycosylase SLT domain UNDYM_0824 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain UNDYM_0829 PF02881 SRP54-type protein, helical bundle domain UNDYM_0829 PF00448 SRP54-type protein, GTPase domain UNDYM_0829 PF02978 Signal peptide binding domain UNDYM_0831 PF09084 NMT1/THI5 like UNDYM_0832 PF00528 Binding-protein-dependent transport system inner membrane component UNDYM_0833 PF00005 ABC transporter UNDYM_0835 PF00512 His Kinase A (phospho-acceptor) domain UNDYM_0835 PF02743 Cache domain UNDYM_0835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UNDYM_0836 PF00158 Sigma-54 interaction domain UNDYM_0836 PF00072 Response regulator receiver domain UNDYM_0836 PF02954 Bacterial regulatory protein, Fis family UNDYM_0837 PF01578 Cytochrome C assembly protein UNDYM_0839 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UNDYM_0839 PF00512 His Kinase A (phospho-acceptor) domain UNDYM_0840 PF00072 Response regulator receiver domain UNDYM_0840 PF00158 Sigma-54 interaction domain UNDYM_0840 PF02954 Bacterial regulatory protein, Fis family UNDYM_0841 PF00317 Ribonucleotide reductase, all-alpha domain UNDYM_0841 PF02867 Ribonucleotide reductase, barrel domain UNDYM_0841 PF03477 ATP cone domain UNDYM_0842 PF00268 Ribonucleotide reductase, small chain UNDYM_0844 PF02325 YGGT family UNDYM_0845 PF00356 Bacterial regulatory proteins, lacI family UNDYM_0846 PF07969 Amidohydrolase family UNDYM_0847 PF00202 Aminotransferase class-III UNDYM_0848 PF08543 Phosphomethylpyrimidine kinase UNDYM_0849 PF00301 Rubredoxin UNDYM_0850 PF00072 Response regulator receiver domain UNDYM_0851 PF00072 Response regulator receiver domain UNDYM_0853 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term UNDYM_0853 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UNDYM_0854 PF01584 CheW-like domain UNDYM_0854 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UNDYM_0854 PF01627 Hpt domain UNDYM_0854 PF07194 P2 response regulator binding domain UNDYM_0854 PF07194 P2 response regulator binding domain UNDYM_0854 PF01627 Hpt domain UNDYM_0854 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UNDYM_0854 PF02895 Signal transducing histidine kinase, homodimeric domain UNDYM_0854 PF02895 Signal transducing histidine kinase, homodimeric domain UNDYM_0854 PF01584 CheW-like domain UNDYM_0855 PF03441 FAD binding domain of DNA photolyase UNDYM_0855 PF00875 DNA photolyase UNDYM_0856 PF02622 Uncharacterized ACR, COG1678 UNDYM_0857 PF03652 Holliday junction resolvase UNDYM_0858 PF00156 Phosphoribosyl transferase domain UNDYM_0859 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain UNDYM_0859 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain UNDYM_0860 PF01979 Amidohydrolase family UNDYM_0862 PF01553 Acyltransferase UNDYM_0863 PF00149 Calcineurin-like phosphoesterase UNDYM_0864 PF00762 Ferrochelatase UNDYM_0865 PF02463 RecF/RecN/SMC N terminal domain UNDYM_0866 PF01513 ATP-NAD kinase UNDYM_0867 PF13419 Haloacid dehalogenase-like hydrolase UNDYM_0868 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding UNDYM_0868 PF01628 HrcA protein C terminal domain UNDYM_0869 PF01628 HrcA protein C terminal domain UNDYM_0870 PF00072 Response regulator receiver domain UNDYM_0870 PF00196 Bacterial regulatory proteins, luxR family UNDYM_0871 PF01475 Ferric uptake regulator family UNDYM_0873 PF04355 SmpA / OmlA family UNDYM_0874 PF05173 Dihydrodipicolinate reductase, C-terminus UNDYM_0874 PF01113 Dihydrodipicolinate reductase, N-terminus UNDYM_0875 PF01618 MotA/TolQ/ExbB proton channel family UNDYM_0876 PF02472 Biopolymer transport protein ExbD/TolR UNDYM_0877 PF13603 Leucyl-tRNA synthetase, Domain 2 UNDYM_0877 PF08264 Anticodon-binding domain of tRNA UNDYM_0877 PF09334 tRNA synthetases class I (M) UNDYM_0880 PF00171 Aldehyde dehydrogenase family UNDYM_0882 PF02926 THUMP domain UNDYM_0882 PF01170 Putative RNA methylase family UPF0020 UNDYM_0883 PF00171 Aldehyde dehydrogenase family UNDYM_0884 PF07690 Major Facilitator Superfamily UNDYM_0886 PF13609 Gram-negative porin UNDYM_0888 PF01636 Phosphotransferase enzyme family UNDYM_0890 PF02566 OsmC-like protein UNDYM_0891 PF00572 Ribosomal protein L13 UNDYM_0892 PF00380 Ribosomal protein S9/S16 UNDYM_0893 PF01118 Semialdehyde dehydrogenase, NAD binding domain UNDYM_0893 PF02774 Semialdehyde dehydrogenase, dimerisation domain UNDYM_0896 PF01521 Iron-sulphur cluster biosynthesis UNDYM_0898 PF02913 FAD linked oxidases, C-terminal domain UNDYM_0898 PF01565 FAD binding domain UNDYM_0899 PF01565 FAD binding domain UNDYM_0900 PF02754 Cysteine-rich domain UNDYM_0900 PF13183 4Fe-4S dicluster domain UNDYM_0901 PF00255 Glutathione peroxidase UNDYM_0902 PF00437 Type II/IV secretion system protein UNDYM_0903 PF00437 Type II/IV secretion system protein UNDYM_0904 PF01168 Alanine racemase, N-terminal domain UNDYM_0905 PF03807 NADP oxidoreductase coenzyme F420-dependent UNDYM_0905 PF14748 Pyrroline-5-carboxylate reductase dimerisation UNDYM_0909 PF01040 UbiA prenyltransferase family UNDYM_0910 PF13416 Bacterial extracellular solute-binding protein UNDYM_0911 PF00528 Binding-protein-dependent transport system inner membrane component UNDYM_0912 PF00528 Binding-protein-dependent transport system inner membrane component UNDYM_0913 PF00005 ABC transporter UNDYM_0913 PF17912 MalK OB fold domain UNDYM_0916 PF01734 Patatin-like phospholipase UNDYM_0917 PF01734 Patatin-like phospholipase UNDYM_0918 PF13302 Acetyltransferase (GNAT) domain UNDYM_0919 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UNDYM_0919 PF03466 LysR substrate binding domain UNDYM_0920 PF00106 short chain dehydrogenase UNDYM_0922 PF00583 Acetyltransferase (GNAT) family UNDYM_0922 PF01047 MarR family UNDYM_0923 PF00270 DEAD/DEAH box helicase UNDYM_0923 PF00271 Helicase conserved C-terminal domain UNDYM_0923 PF17191 RecG wedge domain UNDYM_0924 PF02547 Queuosine biosynthesis protein UNDYM_0925 PF01702 Queuine tRNA-ribosyltransferase UNDYM_0928 PF02699 Preprotein translocase subunit UNDYM_0929 PF02355 Protein export membrane protein UNDYM_0929 PF13721 SecD export protein N-terminal TM region UNDYM_0929 PF07549 SecD/SecF GG Motif UNDYM_0930 PF02355 Protein export membrane protein UNDYM_0930 PF07549 SecD/SecF GG Motif UNDYM_0931 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion UNDYM_0932 PF00873 AcrB/AcrD/AcrF family UNDYM_0933 PF01047 MarR family UNDYM_0934 PF04264 YceI-like domain UNDYM_0936 PF01292 Prokaryotic cytochrome b561 UNDYM_0938 PF00206 Lyase UNDYM_0938 PF08328 Adenylosuccinate lyase C-terminal UNDYM_0939 PF13417 Glutathione S-transferase, N-terminal domain UNDYM_0939 PF00043 Glutathione S-transferase, C-terminal domain UNDYM_0940 PF00210 Ferritin-like domain UNDYM_0945 PF12833 Helix-turn-helix domain UNDYM_0950 PF02666 Phosphatidylserine decarboxylase UNDYM_0951 PF01966 HD domain UNDYM_0951 PF11871 Domain of unknown function (DUF3391) UNDYM_0952 PF00672 HAMP domain UNDYM_0952 PF00512 His Kinase A (phospho-acceptor) domain UNDYM_0952 PF01627 Hpt domain UNDYM_0952 PF00072 Response regulator receiver domain UNDYM_0952 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UNDYM_0952 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) UNDYM_0953 PF00578 AhpC/TSA family UNDYM_0954 PF02627 Carboxymuconolactone decarboxylase family UNDYM_0957 PF01112 Asparaginase UNDYM_0960 PF00293 NUDIX domain UNDYM_0961 PF05222 Alanine dehydrogenase/PNT, N-terminal domain UNDYM_0961 PF01262 Alanine dehydrogenase/PNT, C-terminal domain UNDYM_0962 PF02261 Aspartate decarboxylase UNDYM_0963 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch UNDYM_0964 PF02233 NAD(P) transhydrogenase beta subunit UNDYM_0965 PF00873 AcrB/AcrD/AcrF family UNDYM_0966 PF00529 HlyD membrane-fusion protein of T1SS UNDYM_0966 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion UNDYM_0967 PF02321 Outer membrane efflux protein UNDYM_0969 PF00403 Heavy-metal-associated domain UNDYM_0970 PF13411 MerR HTH family regulatory protein UNDYM_0972 PF00440 Bacterial regulatory proteins, tetR family UNDYM_0975 PF00491 Arginase family UNDYM_0976 PF02423 Ornithine cyclodeaminase/mu-crystallin family UNDYM_0977 PF01037 Lrp/AsnC ligand binding domain UNDYM_0978 PF14532 Sigma-54 interaction domain UNDYM_0978 PF00072 Response regulator receiver domain UNDYM_0978 PF02954 Bacterial regulatory protein, Fis family UNDYM_0979 PF01966 HD domain UNDYM_0980 PF01810 LysE type translocator UNDYM_0983 PF00072 Response regulator receiver domain UNDYM_0984 PF00512 His Kinase A (phospho-acceptor) domain UNDYM_0984 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UNDYM_0986 PF03626 Prokaryotic Cytochrome C oxidase subunit IV UNDYM_0987 PF00510 Cytochrome c oxidase subunit III UNDYM_0988 PF00115 Cytochrome C and Quinol oxidase polypeptide I UNDYM_0989 PF00116 Cytochrome C oxidase subunit II, periplasmic domain UNDYM_0989 PF06481 COX Aromatic Rich Motif UNDYM_0990 PF00083 Sugar (and other) transporter UNDYM_0990 PF07690 Major Facilitator Superfamily UNDYM_0991 PF01389 OmpA-like transmembrane domain UNDYM_0991 PF00691 OmpA family UNDYM_0993 PF00196 Bacterial regulatory proteins, luxR family UNDYM_0993 PF00072 Response regulator receiver domain UNDYM_0994 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UNDYM_0994 PF07730 Histidine kinase UNDYM_0996 PF01494 FAD binding domain UNDYM_0997 PF05195 Aminopeptidase P, N-terminal domain UNDYM_0997 PF00557 Metallopeptidase family M24 UNDYM_0998 PF00483 Nucleotidyl transferase UNDYM_0999 PF01636 Phosphotransferase enzyme family UNDYM_1000 PF04453 LPS transport system D UNDYM_1001 PF00639 PPIC-type PPIASE domain UNDYM_1001 PF09312 SurA N-terminal domain UNDYM_1002 PF04166 Pyridoxal phosphate biosynthetic protein PdxA UNDYM_1003 PF00398 Ribosomal RNA adenine dimethylase UNDYM_1004 PF00072 Response regulator receiver domain UNDYM_1005 PF00342 Phosphoglucose isomerase UNDYM_1006 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily UNDYM_1007 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain UNDYM_1007 PF00437 Type II/IV secretion system protein UNDYM_1008 PF02112 cAMP phosphodiesterases class-II UNDYM_1009 PF01966 HD domain UNDYM_1011 PF00211 Adenylate and Guanylate cyclase catalytic domain UNDYM_1012 PF03594 Benzoate membrane transport protein UNDYM_1013 PF00392 Bacterial regulatory proteins, gntR family UNDYM_1013 PF00155 Aminotransferase class I and II UNDYM_1015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UNDYM_1015 PF03466 LysR substrate binding domain UNDYM_1025 PF01494 FAD binding domain UNDYM_1027 PF01053 Cys/Met metabolism PLP-dependent enzyme UNDYM_1028 PF00291 Pyridoxal-phosphate dependent enzyme UNDYM_1030 PF00232 Glycosyl hydrolase family 1 UNDYM_1033 PF07715 TonB-dependent Receptor Plug Domain UNDYM_1033 PF00593 TonB dependent receptor UNDYM_1035 PF04820 Tryptophan halogenase UNDYM_1036 PF04820 Tryptophan halogenase UNDYM_1037 PF00356 Bacterial regulatory proteins, lacI family UNDYM_1038 PF02253 Phospholipase A1 UNDYM_1039 PF17922 Tetracyclin repressor-like, C-terminal domain UNDYM_1039 PF00440 Bacterial regulatory proteins, tetR family UNDYM_1040 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion UNDYM_1041 PF00873 AcrB/AcrD/AcrF family UNDYM_1044 PF02321 Outer membrane efflux protein UNDYM_1045 PF13533 Biotin-lipoyl like UNDYM_1046 PF02687 FtsX-like permease family UNDYM_1046 PF12704 MacB-like periplasmic core domain UNDYM_1047 PF00005 ABC transporter UNDYM_1050 PF00593 TonB dependent receptor UNDYM_1050 PF07715 TonB-dependent Receptor Plug Domain UNDYM_1051 PF07715 TonB-dependent Receptor Plug Domain UNDYM_1051 PF00593 TonB dependent receptor UNDYM_1055 PF04820 Tryptophan halogenase UNDYM_1058 PF00128 Alpha amylase, catalytic domain UNDYM_1059 PF16338 Domain of unknown function (DUF4968) UNDYM_1059 PF17137 Domain of unknown function (DUF5110) UNDYM_1059 PF01055 Glycosyl hydrolases family 31 UNDYM_1059 PF13802 Galactose mutarotase-like UNDYM_1060 PF02685 Glucokinase UNDYM_1060 PF01380 SIS domain UNDYM_1060 PF01418 Helix-turn-helix domain, rpiR family UNDYM_1066 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UNDYM_1066 PF03466 LysR substrate binding domain UNDYM_1068 PF01063 Amino-transferase class IV UNDYM_1069 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily UNDYM_1070 PF02472 Biopolymer transport protein ExbD/TolR UNDYM_1071 PF02472 Biopolymer transport protein ExbD/TolR UNDYM_1072 PF01618 MotA/TolQ/ExbB proton channel family UNDYM_1075 PF11852 Domain of unknown function (DUF3372) UNDYM_1075 PF17967 Pullulanase N2 domain UNDYM_1075 PF18494 Pullulanase Ins domain UNDYM_1075 PF03714 Bacterial pullanase-associated domain UNDYM_1075 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) UNDYM_1076 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) UNDYM_1076 PF03714 Bacterial pullanase-associated domain UNDYM_1076 PF18494 Pullulanase Ins domain UNDYM_1076 PF17967 Pullulanase N2 domain UNDYM_1076 PF11852 Domain of unknown function (DUF3372) UNDYM_1077 PF01418 Helix-turn-helix domain, rpiR family UNDYM_1077 PF01380 SIS domain UNDYM_1077 PF02685 Glucokinase UNDYM_1078 PF00128 Alpha amylase, catalytic domain UNDYM_1079 PF01965 DJ-1/PfpI family UNDYM_1080 PF01266 FAD dependent oxidoreductase UNDYM_1083 PF01022 Bacterial regulatory protein, arsR family UNDYM_1087 PF03062 MBOAT, membrane-bound O-acyltransferase family UNDYM_1089 PF04972 BON domain UNDYM_1091 PF01594 AI-2E family transporter UNDYM_1094 PF07730 Histidine kinase UNDYM_1094 PF17200 Single Cache domain 2 UNDYM_1095 PF01339 CheB methylesterase UNDYM_1095 PF00072 Response regulator receiver domain UNDYM_1096 PF00072 Response regulator receiver domain UNDYM_1096 PF00196 Bacterial regulatory proteins, luxR family UNDYM_1103 PF04011 LemA family UNDYM_1104 PF04536 TPM domain UNDYM_1106 PF13419 Haloacid dehalogenase-like hydrolase UNDYM_1114 PF07690 Major Facilitator Superfamily UNDYM_1115 PF01119 DNA mismatch repair protein, C-terminal domain UNDYM_1115 PF08676 MutL C terminal dimerisation domain UNDYM_1116 PF09335 SNARE associated Golgi protein UNDYM_1118 PF01810 LysE type translocator UNDYM_1119 PF00155 Aminotransferase class I and II UNDYM_1121 PF11741 AMIN domain UNDYM_1121 PF01520 N-acetylmuramoyl-L-alanine amidase UNDYM_1122 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE UNDYM_1123 PF08331 Domain of unknown function (DUF1730) UNDYM_1126 PF00196 Bacterial regulatory proteins, luxR family UNDYM_1126 PF00072 Response regulator receiver domain UNDYM_1127 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UNDYM_1127 PF00989 PAS fold UNDYM_1127 PF00512 His Kinase A (phospho-acceptor) domain UNDYM_1128 PF03480 Bacterial extracellular solute-binding protein, family 7 UNDYM_1129 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component UNDYM_1130 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component UNDYM_1132 PF00589 Phage integrase family UNDYM_1132 PF02899 Phage integrase, N-terminal SAM-like domain UNDYM_1134 PF00593 TonB dependent receptor UNDYM_1134 PF07715 TonB-dependent Receptor Plug Domain UNDYM_1137 PF00326 Prolyl oligopeptidase family UNDYM_1138 PF07715 TonB-dependent Receptor Plug Domain UNDYM_1138 PF00593 TonB dependent receptor UNDYM_1139 PF04073 Aminoacyl-tRNA editing domain UNDYM_1140 PF02660 Glycerol-3-phosphate acyltransferase UNDYM_1142 PF00814 Glycoprotease family UNDYM_1143 PF00072 Response regulator receiver domain UNDYM_1143 PF03861 ANTAR domain UNDYM_1145 PF00528 Binding-protein-dependent transport system inner membrane component UNDYM_1146 PF00005 ABC transporter UNDYM_1147 PF00563 EAL domain UNDYM_1147 PF03707 Bacterial signalling protein N terminal repeat UNDYM_1147 PF00990 Diguanylate cyclase, GGDEF domain UNDYM_1148 PF08298 PrkA AAA domain UNDYM_1148 PF06798 PrkA serine protein kinase C-terminal domain UNDYM_1149 PF04285 Protein of unknown function (DUF444) UNDYM_1150 PF04293 SpoVR like protein UNDYM_1152 PF01914 MarC family integral membrane protein UNDYM_1154 PF00583 Acetyltransferase (GNAT) family UNDYM_1158 PF13520 Amino acid permease UNDYM_1159 PF05981 CreA protein UNDYM_1164 PF00005 ABC transporter UNDYM_1166 PF13539 D-alanyl-D-alanine carboxypeptidase UNDYM_1167 PF01510 N-acetylmuramoyl-L-alanine amidase UNDYM_1173 PF00144 Beta-lactamase UNDYM_1175 PF03466 LysR substrate binding domain UNDYM_1175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UNDYM_1176 PF13580 SIS domain UNDYM_1177 PF13580 SIS domain UNDYM_1180 PF00593 TonB dependent receptor UNDYM_1180 PF07715 TonB-dependent Receptor Plug Domain UNDYM_1181 PF02638 Glycosyl hydrolase-like 10 UNDYM_1191 PF02092 Glycyl-tRNA synthetase beta subunit UNDYM_1191 PF05746 DALR anticodon binding domain UNDYM_1192 PF02091 Glycyl-tRNA synthetase alpha subunit UNDYM_1193 PF00563 EAL domain UNDYM_1193 PF00990 Diguanylate cyclase, GGDEF domain UNDYM_1193 PF03707 Bacterial signalling protein N terminal repeat UNDYM_1195 PF00248 Aldo/keto reductase family UNDYM_1196 PF03466 LysR substrate binding domain UNDYM_1196 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UNDYM_1199 PF07676 WD40-like Beta Propeller Repeat UNDYM_1199 PF00326 Prolyl oligopeptidase family UNDYM_1209 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily UNDYM_1209 PF18029 Glyoxalase-like domain UNDYM_1212 PF01522 Polysaccharide deacetylase UNDYM_1214 PF08448 PAS fold UNDYM_1214 PF00563 EAL domain UNDYM_1214 PF00990 Diguanylate cyclase, GGDEF domain UNDYM_1214 PF08447 PAS fold UNDYM_1216 PF05163 DinB family UNDYM_1217 PF02203 Tar ligand binding domain homologue UNDYM_1217 PF00672 HAMP domain UNDYM_1217 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UNDYM_1218 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain UNDYM_1218 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase UNDYM_1220 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion UNDYM_1221 PF00873 AcrB/AcrD/AcrF family UNDYM_1222 PF00854 POT family UNDYM_1223 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase UNDYM_1224 PF17151 Periplasmic sensor domain UNDYM_1224 PF00990 Diguanylate cyclase, GGDEF domain UNDYM_1227 PF01544 CorA-like Mg2+ transporter protein UNDYM_1228 PF12833 Helix-turn-helix domain UNDYM_1233 PF02463 RecF/RecN/SMC N terminal domain UNDYM_1237 PF01625 Peptide methionine sulfoxide reductase UNDYM_1241 PF04101 Glycosyltransferase family 28 C-terminal domain UNDYM_1241 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase UNDYM_1242 PF01243 Pyridoxamine 5'-phosphate oxidase UNDYM_1242 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region UNDYM_1243 PF01814 Hemerythrin HHE cation binding domain UNDYM_1244 PF04072 Leucine carboxyl methyltransferase UNDYM_1247 PF00899 ThiF family UNDYM_1248 PF00672 HAMP domain UNDYM_1248 PF02203 Tar ligand binding domain homologue UNDYM_1248 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UNDYM_1249 PF03544 Gram-negative bacterial TonB protein C-terminal UNDYM_1251 PF00149 Calcineurin-like phosphoesterase UNDYM_1252 PF04945 YHS domain UNDYM_1253 PF09278 MerR, DNA binding UNDYM_1253 PF00376 MerR family regulatory protein UNDYM_1254 PF11849 Domain of unknown function (DUF3369) UNDYM_1255 PF08362 YcdC-like protein, C-terminal region UNDYM_1255 PF00440 Bacterial regulatory proteins, tetR family UNDYM_1256 PF00392 Bacterial regulatory proteins, gntR family UNDYM_1256 PF00155 Aminotransferase class I and II UNDYM_1257 PF00202 Aminotransferase class-III UNDYM_1258 PF00171 Aldehyde dehydrogenase family UNDYM_1259 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster UNDYM_1259 PF07992 Pyridine nucleotide-disulphide oxidoreductase UNDYM_1260 PF01180 Dihydroorotate dehydrogenase UNDYM_1261 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin UNDYM_1262 PF01979 Amidohydrolase family UNDYM_1263 PF01546 Peptidase family M20/M25/M40 UNDYM_1263 PF07687 Peptidase dimerisation domain UNDYM_1264 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain UNDYM_1264 PF01411 tRNA synthetases class II (A) UNDYM_1264 PF02272 DHHA1 domain UNDYM_1269 PF03466 LysR substrate binding domain UNDYM_1269 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UNDYM_1270 PF00857 Isochorismatase family UNDYM_1272 PF01966 HD domain UNDYM_1273 PF00672 HAMP domain UNDYM_1273 PF00512 His Kinase A (phospho-acceptor) domain UNDYM_1273 PF13426 PAS domain UNDYM_1273 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UNDYM_1274 PF00990 Diguanylate cyclase, GGDEF domain UNDYM_1274 PF03707 Bacterial signalling protein N terminal repeat UNDYM_1274 PF00563 EAL domain UNDYM_1275 PF03793 PASTA domain UNDYM_1275 PF00069 Protein kinase domain UNDYM_1276 PF00069 Protein kinase domain UNDYM_1277 PF07690 Major Facilitator Superfamily UNDYM_1278 PF04324 BFD-like [2Fe-2S] binding domain UNDYM_1278 PF01077 Nitrite and sulphite reductase 4Fe-4S domain UNDYM_1278 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain UNDYM_1278 PF07992 Pyridine nucleotide-disulphide oxidoreductase UNDYM_1278 PF18267 Rubredoxin NAD+ reductase C-terminal domain UNDYM_1279 PF00355 Rieske [2Fe-2S] domain UNDYM_1280 PF04324 BFD-like [2Fe-2S] binding domain UNDYM_1280 PF04879 Molybdopterin oxidoreductase Fe4S4 domain UNDYM_1280 PF01568 Molydopterin dinucleotide binding domain UNDYM_1280 PF00384 Molybdopterin oxidoreductase UNDYM_1287 PF00211 Adenylate and Guanylate cyclase catalytic domain UNDYM_1290 PF05649 Peptidase family M13 UNDYM_1290 PF01431 Peptidase family M13 UNDYM_1295 PF00155 Aminotransferase class I and II UNDYM_1295 PF00392 Bacterial regulatory proteins, gntR family UNDYM_1296 PF08502 LeuA allosteric (dimerisation) domain UNDYM_1296 PF00682 HMGL-like UNDYM_1297 PF01790 Prolipoprotein diacylglyceryl transferase UNDYM_1298 PF03466 LysR substrate binding domain UNDYM_1298 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UNDYM_1300 PF00034 Cytochrome c UNDYM_1301 PF13458 Periplasmic binding protein UNDYM_1302 PF13404 AsnC-type helix-turn-helix domain UNDYM_1302 PF01037 Lrp/AsnC ligand binding domain UNDYM_1303 PF01266 FAD dependent oxidoreductase UNDYM_1307 PF01432 Peptidase family M3 UNDYM_1308 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain UNDYM_1308 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain UNDYM_1309 PF00593 TonB dependent receptor UNDYM_1309 PF07715 TonB-dependent Receptor Plug Domain UNDYM_1310 PF00456 Transketolase, thiamine diphosphate binding domain UNDYM_1310 PF17831 Pyruvate dehydrogenase E1 component middle domain UNDYM_1311 PF02817 e3 binding domain UNDYM_1311 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) UNDYM_1311 PF00364 Biotin-requiring enzyme UNDYM_1312 PF07992 Pyridine nucleotide-disulphide oxidoreductase UNDYM_1312 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain UNDYM_1313 PF05193 Peptidase M16 inactive domain UNDYM_1313 PF00675 Insulinase (Peptidase family M16) UNDYM_1315 PF01966 HD domain UNDYM_1315 PF00072 Response regulator receiver domain UNDYM_1317 PF00990 Diguanylate cyclase, GGDEF domain UNDYM_1322 PF00005 ABC transporter UNDYM_1327 PF06736 Protein of unknown function (DUF1211) UNDYM_1332 PF07676 WD40-like Beta Propeller Repeat UNDYM_1332 PF14684 Tricorn protease C1 domain UNDYM_1332 PF14685 Tricorn protease PDZ domain UNDYM_1332 PF03572 Peptidase family S41 UNDYM_1333 PF12891 Glycoside hydrolase family 44 UNDYM_1333 PF00942 Cellulose binding domain UNDYM_1334 PF00107 Zinc-binding dehydrogenase UNDYM_1334 PF16884 N-terminal domain of oxidoreductase UNDYM_1335 PF03466 LysR substrate binding domain UNDYM_1335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UNDYM_1337 PF00202 Aminotransferase class-III UNDYM_1338 PF00111 2Fe-2S iron-sulfur cluster binding domain UNDYM_1338 PF00970 Oxidoreductase FAD-binding domain UNDYM_1338 PF00175 Oxidoreductase NAD-binding domain UNDYM_1340 PF00989 PAS fold UNDYM_1340 PF00512 His Kinase A (phospho-acceptor) domain UNDYM_1340 PF00672 HAMP domain UNDYM_1340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UNDYM_1342 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain UNDYM_1342 PF00437 Type II/IV secretion system protein UNDYM_1343 PF17284 Spermidine synthase tetramerisation domain UNDYM_1347 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UNDYM_1347 PF00183 Hsp90 protein UNDYM_1353 PF01406 tRNA synthetases class I (C) catalytic domain UNDYM_1355 PF00990 Diguanylate cyclase, GGDEF domain UNDYM_1356 PF01810 LysE type translocator UNDYM_1357 PF00155 Aminotransferase class I and II UNDYM_1358 PF01810 LysE type translocator UNDYM_1359 PF00892 EamA-like transporter family UNDYM_1361 PF00155 Aminotransferase class I and II UNDYM_1364 PF08448 PAS fold UNDYM_1364 PF00512 His Kinase A (phospho-acceptor) domain UNDYM_1364 PF00072 Response regulator receiver domain UNDYM_1364 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UNDYM_1364 PF13188 PAS domain UNDYM_1365 PF00849 RNA pseudouridylate synthase UNDYM_1365 PF01479 S4 domain UNDYM_1366 PF13614 AAA domain UNDYM_1366 PF00376 MerR family regulatory protein UNDYM_1368 PF01757 Acyltransferase family UNDYM_1371 PF00512 His Kinase A (phospho-acceptor) domain UNDYM_1371 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UNDYM_1371 PF00672 HAMP domain UNDYM_1372 PF00072 Response regulator receiver domain UNDYM_1372 PF00486 Transcriptional regulatory protein, C terminal UNDYM_1373 PF02464 Competence-damaged protein UNDYM_1376 PF07963 Prokaryotic N-terminal methylation motif UNDYM_1376 PF00114 Pilin (bacterial filament) UNDYM_1381 PF05567 Neisseria PilC beta-propeller domain UNDYM_1382 PF05567 Neisseria PilC beta-propeller domain UNDYM_1383 PF00114 Pilin (bacterial filament) UNDYM_1383 PF07963 Prokaryotic N-terminal methylation motif UNDYM_1384 PF03477 ATP cone domain UNDYM_1385 PF00464 Serine hydroxymethyltransferase UNDYM_1386 PF00106 short chain dehydrogenase UNDYM_1387 PF03061 Thioesterase superfamily UNDYM_1388 PF01618 MotA/TolQ/ExbB proton channel family UNDYM_1389 PF02472 Biopolymer transport protein ExbD/TolR UNDYM_1390 PF01103 Surface antigen UNDYM_1390 PF07244 Surface antigen variable number repeat UNDYM_1391 PF04357 TamB, inner membrane protein subunit of TAM complex UNDYM_1392 PF00675 Insulinase (Peptidase family M16) UNDYM_1392 PF05193 Peptidase M16 inactive domain UNDYM_1397 PF03109 ABC1 family UNDYM_1398 PF00440 Bacterial regulatory proteins, tetR family UNDYM_1398 PF17934 Tetracyclin repressor-like, C-terminal domain UNDYM_1400 PF18081 Fanconi anemia-associated nuclease SAP domain UNDYM_1400 PF08774 VRR-NUC domain UNDYM_1409 PF02384 N-6 DNA Methylase UNDYM_1410 PF01554 MatE UNDYM_1412 PF01197 Ribosomal protein L31 UNDYM_1413 PF03458 UPF0126 domain UNDYM_1414 PF08361 MAATS-type transcriptional repressor, C-terminal region UNDYM_1414 PF00440 Bacterial regulatory proteins, tetR family UNDYM_1416 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion UNDYM_1417 PF00873 AcrB/AcrD/AcrF family UNDYM_1418 PF02321 Outer membrane efflux protein UNDYM_1422 PF07732 Multicopper oxidase UNDYM_1423 PF02082 Transcriptional regulator UNDYM_1424 PF00115 Cytochrome C and Quinol oxidase polypeptide I UNDYM_1427 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain UNDYM_1427 PF07498 Rho termination factor, N-terminal domain UNDYM_1427 PF07497 Rho termination factor, RNA-binding domain UNDYM_1428 PF00085 Thioredoxin UNDYM_1430 PF00580 UvrD/REP helicase N-terminal domain UNDYM_1430 PF13361 UvrD-like helicase C-terminal domain UNDYM_1430 PF12705 PD-(D/E)XK nuclease superfamily UNDYM_1433 PF05164 Cell division protein ZapA UNDYM_1435 PF02885 Glycosyl transferase family, helical bundle domain UNDYM_1441 PF00593 TonB dependent receptor UNDYM_1441 PF07715 TonB-dependent Receptor Plug Domain UNDYM_1444 PF08359 YsiA-like protein, C-terminal region UNDYM_1444 PF00440 Bacterial regulatory proteins, tetR family UNDYM_1446 PF01165 Ribosomal protein S21 UNDYM_1448 PF08275 DNA primase catalytic core, N-terminal domain UNDYM_1448 PF08278 DNA primase DnaG DnaB-binding UNDYM_1448 PF01807 CHC2 zinc finger UNDYM_1448 PF10410 DnaB-helicase binding domain of primase UNDYM_1449 PF04546 Sigma-70, non-essential region UNDYM_1449 PF04545 Sigma-70, region 4 UNDYM_1449 PF04539 Sigma-70 region 3 UNDYM_1449 PF00140 Sigma-70 factor, region 1.2 UNDYM_1449 PF03979 Sigma-70 factor, region 1.1 UNDYM_1449 PF04542 Sigma-70 region 2 UNDYM_1450 PF00270 DEAD/DEAH box helicase UNDYM_1450 PF00271 Helicase conserved C-terminal domain UNDYM_1451 PF02423 Ornithine cyclodeaminase/mu-crystallin family UNDYM_1453 PF03466 LysR substrate binding domain UNDYM_1453 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UNDYM_1457 PF00441 Acyl-CoA dehydrogenase, C-terminal domain UNDYM_1457 PF02771 Acyl-CoA dehydrogenase, N-terminal domain UNDYM_1457 PF02770 Acyl-CoA dehydrogenase, middle domain UNDYM_1458 PF13193 AMP-binding enzyme C-terminal domain UNDYM_1458 PF00501 AMP-binding enzyme UNDYM_1460 PF08338 Domain of unknown function (DUF1731) UNDYM_1460 PF01370 NAD dependent epimerase/dehydratase family UNDYM_1463 PF00072 Response regulator receiver domain UNDYM_1463 PF00486 Transcriptional regulatory protein, C terminal UNDYM_1464 PF08521 Two-component sensor kinase N-terminal UNDYM_1464 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UNDYM_1464 PF00512 His Kinase A (phospho-acceptor) domain UNDYM_1465 PF00691 OmpA family UNDYM_1466 PF00768 D-alanyl-D-alanine carboxypeptidase UNDYM_1468 PF01638 HxlR-like helix-turn-helix UNDYM_1470 PF05368 NmrA-like family UNDYM_1472 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit UNDYM_1475 PF00196 Bacterial regulatory proteins, luxR family UNDYM_1475 PF00072 Response regulator receiver domain UNDYM_1476 PF07730 Histidine kinase UNDYM_1476 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UNDYM_1477 PF13382 Adenine deaminase C-terminal domain UNDYM_1477 PF01979 Amidohydrolase family UNDYM_1478 PF01343 Peptidase family S49 UNDYM_1481 PF00009 Elongation factor Tu GTP binding domain UNDYM_1481 PF03144 Elongation factor Tu domain 2 UNDYM_1481 PF16658 Class II release factor RF3, C-terminal domain UNDYM_1484 PF00528 Binding-protein-dependent transport system inner membrane component UNDYM_1488 PF04820 Tryptophan halogenase UNDYM_1491 PF01618 MotA/TolQ/ExbB proton channel family UNDYM_1492 PF02472 Biopolymer transport protein ExbD/TolR UNDYM_1493 PF02472 Biopolymer transport protein ExbD/TolR UNDYM_1494 PF01869 BadF/BadG/BcrA/BcrD ATPase family UNDYM_1495 PF00392 Bacterial regulatory proteins, gntR family UNDYM_1495 PF07702 UTRA domain UNDYM_1496 PF01979 Amidohydrolase family UNDYM_1497 PF01380 SIS domain UNDYM_1499 PF00528 Binding-protein-dependent transport system inner membrane component UNDYM_1500 PF00528 Binding-protein-dependent transport system inner membrane component UNDYM_1501 PF01915 Glycosyl hydrolase family 3 C-terminal domain UNDYM_1501 PF00933 Glycosyl hydrolase family 3 N terminal domain UNDYM_1502 PF08402 TOBE domain UNDYM_1502 PF00005 ABC transporter UNDYM_1506 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UNDYM_1506 PF03466 LysR substrate binding domain UNDYM_1507 PF00107 Zinc-binding dehydrogenase UNDYM_1507 PF08240 Alcohol dehydrogenase GroES-like domain UNDYM_1511 PF00072 Response regulator receiver domain UNDYM_1511 PF04397 LytTr DNA-binding domain UNDYM_1512 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UNDYM_1512 PF06580 Histidine kinase UNDYM_1512 PF07694 5TMR of 5TMR-LYT UNDYM_1519 PF02333 Phytase UNDYM_1521 PF05230 MASE2 domain UNDYM_1521 PF00990 Diguanylate cyclase, GGDEF domain UNDYM_1524 PF00326 Prolyl oligopeptidase family UNDYM_1524 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region UNDYM_1525 PF12833 Helix-turn-helix domain UNDYM_1526 PF01177 Asp/Glu/Hydantoin racemase UNDYM_1528 PF00392 Bacterial regulatory proteins, gntR family UNDYM_1529 PF00005 ABC transporter UNDYM_1532 PF00892 EamA-like transporter family UNDYM_1533 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain UNDYM_1533 PF02777 Iron/manganese superoxide dismutases, C-terminal domain UNDYM_1534 PF02601 Exonuclease VII, large subunit UNDYM_1534 PF13742 OB-fold nucleic acid binding domain UNDYM_1535 PF01618 MotA/TolQ/ExbB proton channel family UNDYM_1536 PF02472 Biopolymer transport protein ExbD/TolR UNDYM_1537 PF02606 Tetraacyldisaccharide-1-P 4'-kinase UNDYM_1538 PF03966 Trm112p-like protein UNDYM_1539 PF02348 Cytidylyltransferase UNDYM_1540 PF05191 Adenylate kinase, active site lid UNDYM_1541 PF03030 Inorganic H+ pyrophosphatase UNDYM_1542 PF00106 short chain dehydrogenase UNDYM_1544 PF00545 ribonuclease UNDYM_1546 PF00551 Formyl transferase UNDYM_1547 PF01189 16S rRNA methyltransferase RsmB/F UNDYM_1547 PF01029 NusB family UNDYM_1548 PF00924 Mechanosensitive ion channel UNDYM_1548 PF12794 Mechanosensitive ion channel inner membrane domain 1 UNDYM_1548 PF12795 Mechanosensitive ion channel porin domain UNDYM_1550 PF00072 Response regulator receiver domain UNDYM_1550 PF00486 Transcriptional regulatory protein, C terminal UNDYM_1551 PF00072 Response regulator receiver domain UNDYM_1552 PF01627 Hpt domain UNDYM_1552 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UNDYM_1552 PF00672 HAMP domain UNDYM_1552 PF00072 Response regulator receiver domain UNDYM_1552 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) UNDYM_1552 PF00512 His Kinase A (phospho-acceptor) domain UNDYM_1553 PF00471 Ribosomal protein L33 UNDYM_1554 PF00830 Ribosomal L28 family UNDYM_1555 PF04002 RadC-like JAB domain UNDYM_1557 PF02401 LytB protein UNDYM_1558 PF02653 Branched-chain amino acid transport system / permease component UNDYM_1559 PF02653 Branched-chain amino acid transport system / permease component UNDYM_1559 PF11862 Domain of unknown function (DUF3382) UNDYM_1560 PF00005 ABC transporter UNDYM_1560 PF12399 Branched-chain amino acid ATP-binding cassette transporter UNDYM_1561 PF00005 ABC transporter UNDYM_1562 PF07690 Major Facilitator Superfamily UNDYM_1565 PF09361 Phasin protein UNDYM_1568 PF00881 Nitroreductase family UNDYM_1569 PF00768 D-alanyl-D-alanine carboxypeptidase UNDYM_1572 PF02368 Bacterial Ig-like domain (group 2) UNDYM_1572 PF11999 Protein of unknown function (DUF3494) UNDYM_1573 PF00691 OmpA family UNDYM_1575 PF08335 GlnD PII-uridylyltransferase UNDYM_1575 PF03710 Glutamate-ammonia ligase adenylyltransferase UNDYM_1576 PF08335 GlnD PII-uridylyltransferase UNDYM_1576 PF03710 Glutamate-ammonia ligase adenylyltransferase UNDYM_1580 PF00795 Carbon-nitrogen hydrolase UNDYM_1581 PF01523 Putative modulator of DNA gyrase UNDYM_1582 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain UNDYM_1585 PF10609 NUBPL iron-transfer P-loop NTPase UNDYM_1586 PF03170 Bacterial cellulose synthase subunit UNDYM_1586 PF03552 Cellulose synthase UNDYM_1586 PF07238 PilZ domain UNDYM_1586 PF00535 Glycosyl transferase family 2 UNDYM_1587 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) UNDYM_1588 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) UNDYM_1590 PF00793 DAHP synthetase I family UNDYM_1593 PF04461 Protein of unknown function (DUF520) UNDYM_1594 PF01565 FAD binding domain UNDYM_1594 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain UNDYM_1596 PF01435 Peptidase family M48 UNDYM_1597 PF05987 Bacterial protein of unknown function (DUF898) UNDYM_1599 PF00107 Zinc-binding dehydrogenase UNDYM_1599 PF08240 Alcohol dehydrogenase GroES-like domain UNDYM_1600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UNDYM_1600 PF03466 LysR substrate binding domain UNDYM_1603 PF00282 Pyridoxal-dependent decarboxylase conserved domain UNDYM_1608 PF00106 short chain dehydrogenase UNDYM_1613 PF00589 Phage integrase family UNDYM_1649 PF04860 Phage portal protein UNDYM_1684 PF13458 Periplasmic binding protein UNDYM_1685 PF02163 Peptidase family M50 UNDYM_1688 PF00080 Copper/zinc superoxide dismutase (SODC) UNDYM_1690 PF00753 Metallo-beta-lactamase superfamily UNDYM_1693 PF00144 Beta-lactamase UNDYM_1699 PF03301 Tryptophan 2,3-dioxygenase UNDYM_1700 PF00266 Aminotransferase class-V UNDYM_1701 PF01037 Lrp/AsnC ligand binding domain UNDYM_1704 PF00482 Type II secretion system (T2SS), protein F UNDYM_1707 PF00144 Beta-lactamase UNDYM_1708 PF03023 Lipid II flippase MurJ UNDYM_1710 PF13229 Right handed beta helix region UNDYM_1711 PF00144 Beta-lactamase UNDYM_1712 PF09906 Uncharacterized protein conserved in bacteria (DUF2135) UNDYM_1713 PF09906 Uncharacterized protein conserved in bacteria (DUF2135) UNDYM_1714 PF08486 Stage II sporulation protein UNDYM_1714 PF10062 Predicted secreted protein (DUF2300) UNDYM_1715 PF00207 Alpha-2-macroglobulin family UNDYM_1715 PF07703 Alpha-2-macroglobulin bait region domain UNDYM_1715 PF01835 MG2 domain UNDYM_1716 PF06672 Protein of unknown function (DUF1175) UNDYM_1717 PF09909 Uncharacterized protein conserved in bacteria (DUF2138) UNDYM_1719 PF13280 WYL domain UNDYM_1719 PF08279 HTH domain UNDYM_1720 PF00034 Cytochrome c UNDYM_1721 PF01183 Glycosyl hydrolases family 25 UNDYM_1728 PF03466 LysR substrate binding domain UNDYM_1728 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UNDYM_1729 PF00462 Glutaredoxin UNDYM_1730 PF06865 Pyrimidine/purine nucleoside phosphorylase UNDYM_1731 PF00764 Arginosuccinate synthase UNDYM_1732 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain UNDYM_1732 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain UNDYM_1735 PF03062 MBOAT, membrane-bound O-acyltransferase family UNDYM_1736 PF16822 SGNH hydrolase-like domain, acetyltransferase AlgX UNDYM_1738 PF02146 Sir2 family UNDYM_1741 PF03193 RsgA GTPase UNDYM_1742 PF01329 Pterin 4 alpha carbinolamine dehydratase UNDYM_1743 PF01435 Peptidase family M48 UNDYM_1743 PF16491 CAAX prenyl protease N-terminal, five membrane helices UNDYM_1744 PF00929 Exonuclease UNDYM_1745 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase UNDYM_1750 PF00994 Probable molybdopterin binding domain UNDYM_1750 PF18146 Damage-inducible protein CinA KH domain UNDYM_1750 PF02464 Competence-damaged protein UNDYM_1755 PF12833 Helix-turn-helix domain UNDYM_1755 PF02311 AraC-like ligand binding domain UNDYM_1758 PF00072 Response regulator receiver domain UNDYM_1758 PF00486 Transcriptional regulatory protein, C terminal UNDYM_1759 PF13756 Stimulus-sensing domain UNDYM_1759 PF13755 Sensor N-terminal transmembrane domain UNDYM_1759 PF00512 His Kinase A (phospho-acceptor) domain UNDYM_1759 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UNDYM_1759 PF00672 HAMP domain UNDYM_1764 PF00990 Diguanylate cyclase, GGDEF domain UNDYM_1771 PF07702 UTRA domain UNDYM_1771 PF00392 Bacterial regulatory proteins, gntR family UNDYM_1772 PF03466 LysR substrate binding domain UNDYM_1772 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UNDYM_1775 PF00583 Acetyltransferase (GNAT) family UNDYM_1775 PF13380 CoA binding domain UNDYM_1775 PF13607 Succinyl-CoA ligase like flavodoxin domain UNDYM_1777 PF17392 Urocanase C-terminal domain UNDYM_1777 PF01175 Urocanase Rossmann-like domain UNDYM_1777 PF17391 Urocanase N-terminal domain UNDYM_1778 PF00221 Aromatic amino acid lyase UNDYM_1780 PF01979 Amidohydrolase family UNDYM_1783 PF00072 Response regulator receiver domain UNDYM_1783 PF00486 Transcriptional regulatory protein, C terminal UNDYM_1784 PF00563 EAL domain UNDYM_1784 PF00072 Response regulator receiver domain UNDYM_1784 PF00990 Diguanylate cyclase, GGDEF domain UNDYM_1785 PF03466 LysR substrate binding domain UNDYM_1785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UNDYM_1788 PF02525 Flavodoxin-like fold UNDYM_1793 PF12146 Serine aminopeptidase, S33 UNDYM_1793 PF12147 Putative methyltransferase UNDYM_1794 PF01066 CDP-alcohol phosphatidyltransferase UNDYM_1797 PF00106 short chain dehydrogenase UNDYM_1800 PF00521 DNA gyrase/topoisomerase IV, subunit A UNDYM_1801 PF00204 DNA gyrase B UNDYM_1801 PF00986 DNA gyrase B subunit, carboxyl terminus UNDYM_1801 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UNDYM_1801 PF01751 Toprim domain UNDYM_1805 PF01649 Ribosomal protein S20 UNDYM_1807 PF00849 RNA pseudouridylate synthase UNDYM_1808 PF00180 Isocitrate/isopropylmalate dehydrogenase UNDYM_1811 PF00072 Response regulator receiver domain UNDYM_1811 PF00196 Bacterial regulatory proteins, luxR family UNDYM_1812 PF07730 Histidine kinase UNDYM_1812 PF17200 Single Cache domain 2 UNDYM_1813 PF00313 'Cold-shock' DNA-binding domain UNDYM_1814 PF02617 ATP-dependent Clp protease adaptor protein ClpS UNDYM_1815 PF17871 AAA lid domain UNDYM_1815 PF00004 ATPase family associated with various cellular activities (AAA) UNDYM_1815 PF02861 Clp amino terminal domain, pathogenicity island component UNDYM_1815 PF07724 AAA domain (Cdc48 subfamily) UNDYM_1815 PF10431 C-terminal, D2-small domain, of ClpB protein UNDYM_1818 PF05726 Pirin C-terminal cupin domain UNDYM_1818 PF02678 Pirin UNDYM_1820 PF00692 dUTPase UNDYM_1821 PF04127 DNA / pantothenate metabolism flavoprotein UNDYM_1821 PF02441 Flavoprotein UNDYM_1822 PF01252 Signal peptidase (SPase) II UNDYM_1823 PF08264 Anticodon-binding domain of tRNA UNDYM_1823 PF00133 tRNA synthetases class I (I, L, M and V) UNDYM_1823 PF06827 Zinc finger found in FPG and IleRS UNDYM_1824 PF06574 FAD synthetase UNDYM_1824 PF01687 Riboflavin kinase UNDYM_1832 PF02798 Glutathione S-transferase, N-terminal domain UNDYM_1832 PF14497 Glutathione S-transferase, C-terminal domain UNDYM_1835 PF02272 DHHA1 domain UNDYM_1835 PF01411 tRNA synthetases class II (A) UNDYM_1835 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain UNDYM_1837 PF04452 RNA methyltransferase UNDYM_1839 PF03738 Glutathionylspermidine synthase preATP-grasp UNDYM_1841 PF17284 Spermidine synthase tetramerisation domain UNDYM_1842 PF00176 SNF2 family N-terminal domain UNDYM_1842 PF12419 SNF2 Helicase protein UNDYM_1842 PF00271 Helicase conserved C-terminal domain UNDYM_1843 PF00456 Transketolase, thiamine diphosphate binding domain UNDYM_1843 PF02780 Transketolase, C-terminal domain UNDYM_1843 PF02779 Transketolase, pyrimidine binding domain UNDYM_1845 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain UNDYM_1845 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain UNDYM_1846 PF10502 Signal peptidase, peptidase S26 UNDYM_1850 PF01219 Prokaryotic diacylglycerol kinase UNDYM_1851 PF02277 Phosphoribosyltransferase UNDYM_1852 PF02654 Cobalamin-5-phosphate synthase UNDYM_1856 PF00593 TonB dependent receptor UNDYM_1856 PF07715 TonB-dependent Receptor Plug Domain UNDYM_1857 PF01032 FecCD transport family UNDYM_1858 PF00005 ABC transporter UNDYM_1859 PF12557 Cob(I)alamin adenosyltransferase N terminal UNDYM_1859 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP UNDYM_1860 PF07685 CobB/CobQ-like glutamine amidotransferase domain UNDYM_1860 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain UNDYM_1861 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase UNDYM_1862 PF17113 Regulatory signalling modulator protein AmpE UNDYM_1862 PF03186 CobD/Cbib protein UNDYM_1863 PF00155 Aminotransferase class I and II UNDYM_1864 PF01497 Periplasmic binding protein UNDYM_1865 PF01497 Periplasmic binding protein UNDYM_1866 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain UNDYM_1866 PF07685 CobB/CobQ-like glutamine amidotransferase domain UNDYM_1873 PF00302 Chloramphenicol acetyltransferase UNDYM_1874 PF00923 Transaldolase/Fructose-6-phosphate aldolase UNDYM_1875 PF00586 AIR synthase related protein, N-terminal domain UNDYM_1875 PF02769 AIR synthase related protein, C-terminal domain UNDYM_1876 PF00270 DEAD/DEAH box helicase UNDYM_1876 PF00271 Helicase conserved C-terminal domain UNDYM_1877 PF01270 Glycosyl hydrolases family 8 UNDYM_1881 PF00005 ABC transporter UNDYM_1881 PF08352 Oligopeptide/dipeptide transporter, C-terminal region UNDYM_1882 PF00528 Binding-protein-dependent transport system inner membrane component UNDYM_1883 PF00528 Binding-protein-dependent transport system inner membrane component UNDYM_1884 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle UNDYM_1885 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle UNDYM_1885 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle UNDYM_1887 PF01618 MotA/TolQ/ExbB proton channel family UNDYM_1888 PF02472 Biopolymer transport protein ExbD/TolR UNDYM_1891 PF00990 Diguanylate cyclase, GGDEF domain UNDYM_1896 PF07670 Nucleoside recognition UNDYM_1898 PF01979 Amidohydrolase family UNDYM_1899 PF01557 Fumarylacetoacetate (FAA) hydrolase family UNDYM_1900 PF14497 Glutathione S-transferase, C-terminal domain UNDYM_1900 PF02798 Glutathione S-transferase, N-terminal domain UNDYM_1901 PF11849 Domain of unknown function (DUF3369) UNDYM_1902 PF00512 His Kinase A (phospho-acceptor) domain UNDYM_1902 PF00989 PAS fold UNDYM_1902 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UNDYM_1907 PF12833 Helix-turn-helix domain UNDYM_1911 PF02254 TrkA-N domain UNDYM_1911 PF00999 Sodium/hydrogen exchanger family UNDYM_1915 PF00850 Histone deacetylase domain UNDYM_1916 PF13404 AsnC-type helix-turn-helix domain UNDYM_1916 PF01037 Lrp/AsnC ligand binding domain UNDYM_1922 PF00563 EAL domain UNDYM_1922 PF00990 Diguanylate cyclase, GGDEF domain UNDYM_1922 PF03707 Bacterial signalling protein N terminal repeat UNDYM_1923 PF00120 Glutamine synthetase, catalytic domain UNDYM_1923 PF03951 Glutamine synthetase, beta-Grasp domain UNDYM_1925 PF00512 His Kinase A (phospho-acceptor) domain UNDYM_1925 PF00989 PAS fold UNDYM_1925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UNDYM_1926 PF02954 Bacterial regulatory protein, Fis family UNDYM_1926 PF00072 Response regulator receiver domain UNDYM_1926 PF00158 Sigma-54 interaction domain UNDYM_1927 PF04608 Phosphatidylglycerophosphatase A UNDYM_1928 PF02769 AIR synthase related protein, C-terminal domain UNDYM_1928 PF00586 AIR synthase related protein, N-terminal domain UNDYM_1929 PF07992 Pyridine nucleotide-disulphide oxidoreductase UNDYM_1929 PF18113 Rubredoxin binding C-terminal domain UNDYM_1930 PF00301 Rubredoxin UNDYM_1932 PF03949 Malic enzyme, NAD binding domain UNDYM_1932 PF00390 Malic enzyme, N-terminal domain UNDYM_1932 PF01515 Phosphate acetyl/butaryl transferase UNDYM_1934 PF13532 2OG-Fe(II) oxygenase superfamily UNDYM_1936 PF08223 PaaX-like protein C-terminal domain UNDYM_1936 PF07848 PaaX-like protein UNDYM_1937 PF05138 Phenylacetic acid catabolic protein UNDYM_1938 PF06243 Phenylacetic acid degradation B UNDYM_1939 PF05138 Phenylacetic acid catabolic protein UNDYM_1940 PF01883 Iron-sulfur cluster assembly protein UNDYM_1941 PF00970 Oxidoreductase FAD-binding domain UNDYM_1941 PF00111 2Fe-2S iron-sulfur cluster binding domain UNDYM_1941 PF00175 Oxidoreductase NAD-binding domain UNDYM_1942 PF00378 Enoyl-CoA hydratase/isomerase UNDYM_1943 PF03061 Thioesterase superfamily UNDYM_1945 PF00108 Thiolase, N-terminal domain UNDYM_1945 PF02803 Thiolase, C-terminal domain UNDYM_1946 PF00132 Bacterial transferase hexapeptide (six repeats) UNDYM_1947 PF01575 MaoC like domain UNDYM_1947 PF00171 Aldehyde dehydrogenase family UNDYM_1948 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UNDYM_1948 PF02743 Cache domain UNDYM_1948 PF00512 His Kinase A (phospho-acceptor) domain UNDYM_1949 PF02705 K+ potassium transporter UNDYM_1951 PF00814 Glycoprotease family UNDYM_1953 PF03167 Uracil DNA glycosylase superfamily UNDYM_1955 PF07690 Major Facilitator Superfamily UNDYM_1956 PF18073 Rubredoxin metal binding domain UNDYM_1957 PF01593 Flavin containing amine oxidoreductase UNDYM_1965 PF00873 AcrB/AcrD/AcrF family UNDYM_1966 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase UNDYM_1966 PF05698 Bacterial trigger factor protein (TF) C-terminus UNDYM_1966 PF05697 Bacterial trigger factor protein (TF) UNDYM_1967 PF00574 Clp protease UNDYM_1968 PF07724 AAA domain (Cdc48 subfamily) UNDYM_1968 PF10431 C-terminal, D2-small domain, of ClpB protein UNDYM_1968 PF06689 ClpX C4-type zinc finger UNDYM_1969 PF00004 ATPase family associated with various cellular activities (AAA) UNDYM_1969 PF05362 Lon protease (S16) C-terminal proteolytic domain UNDYM_1969 PF02190 ATP-dependent protease La (LON) substrate-binding domain UNDYM_1970 PF00717 Peptidase S24-like UNDYM_1970 PF01726 LexA DNA binding domain UNDYM_1971 PF01250 Ribosomal protein S6 UNDYM_1973 PF01084 Ribosomal protein S18 UNDYM_1974 PF01281 Ribosomal protein L9, N-terminal domain UNDYM_1974 PF03948 Ribosomal protein L9, C-terminal domain UNDYM_1975 PF00772 DnaB-like helicase N terminal domain UNDYM_1975 PF03796 DnaB-like helicase C terminal domain UNDYM_1977 PF01384 Phosphate transporter family UNDYM_1978 PF00072 Response regulator receiver domain UNDYM_1978 PF04397 LytTr DNA-binding domain UNDYM_1979 PF06580 Histidine kinase UNDYM_1980 PF03707 Bacterial signalling protein N terminal repeat UNDYM_1980 PF00563 EAL domain UNDYM_1980 PF00990 Diguanylate cyclase, GGDEF domain UNDYM_1981 PF01264 Chorismate synthase UNDYM_1982 PF00330 Aconitase family (aconitate hydratase) UNDYM_1983 PF00694 Aconitase C-terminal domain UNDYM_1984 PF00180 Isocitrate/isopropylmalate dehydrogenase UNDYM_1985 PF02774 Semialdehyde dehydrogenase, dimerisation domain UNDYM_1985 PF01118 Semialdehyde dehydrogenase, NAD binding domain UNDYM_1988 PF01416 tRNA pseudouridine synthase UNDYM_1989 PF06421 GTP-binding protein LepA C-terminus UNDYM_1989 PF00009 Elongation factor Tu GTP binding domain UNDYM_1989 PF00679 Elongation factor G C-terminus UNDYM_1989 PF03144 Elongation factor Tu domain 2 UNDYM_1990 PF10502 Signal peptidase, peptidase S26 UNDYM_1992 PF14622 Ribonuclease-III-like UNDYM_1992 PF00035 Double-stranded RNA binding motif UNDYM_1993 PF14622 Ribonuclease-III-like UNDYM_1993 PF00035 Double-stranded RNA binding motif UNDYM_1994 PF01926 50S ribosome-binding GTPase UNDYM_1994 PF07650 KH domain UNDYM_1995 PF11967 Recombination protein O N terminal UNDYM_1995 PF02565 Recombination protein O C terminal UNDYM_1996 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ UNDYM_1997 PF01648 4'-phosphopantetheinyl transferase superfamily UNDYM_1998 PF08459 UvrC Helix-hairpin-helix N-terminal UNDYM_1998 PF02151 UvrB/uvrC motif UNDYM_1998 PF01541 GIY-YIG catalytic domain UNDYM_1999 PF01541 GIY-YIG catalytic domain UNDYM_1999 PF08459 UvrC Helix-hairpin-helix N-terminal UNDYM_1999 PF02151 UvrB/uvrC motif UNDYM_2000 PF01066 CDP-alcohol phosphatidyltransferase UNDYM_2003 PF01757 Acyltransferase family UNDYM_2004 PF00211 Adenylate and Guanylate cyclase catalytic domain UNDYM_2006 PF01435 Peptidase family M48 UNDYM_2009 PF00440 Bacterial regulatory proteins, tetR family UNDYM_2009 PF13977 BetI-type transcriptional repressor, C-terminal UNDYM_2010 PF00440 Bacterial regulatory proteins, tetR family UNDYM_2011 PF01494 FAD binding domain UNDYM_2012 PF07690 Major Facilitator Superfamily UNDYM_2013 PF01312 FlhB HrpN YscU SpaS Family UNDYM_2014 PF00771 FHIPEP family UNDYM_2015 PF00448 SRP54-type protein, GTPase domain UNDYM_2017 PF04542 Sigma-70 region 2 UNDYM_2017 PF04545 Sigma-70, region 4 UNDYM_2017 PF04539 Sigma-70 region 3 UNDYM_2018 PF01618 MotA/TolQ/ExbB proton channel family UNDYM_2019 PF00691 OmpA family UNDYM_2019 PF13677 Membrane MotB of proton-channel complex MotA/MotB UNDYM_2022 PF17656 FlgA N-terminal domain UNDYM_2022 PF13144 Chaperone for flagella basal body P-ring formation UNDYM_2023 PF00460 Flagella basal body rod protein UNDYM_2024 PF06429 Flagellar basal body rod FlgEFG protein C-terminal UNDYM_2024 PF00460 Flagella basal body rod protein UNDYM_2025 PF13861 FlgD Tudor-like domain UNDYM_2025 PF13860 FlgD Ig-like domain UNDYM_2025 PF03963 Flagellar hook capping protein - N-terminal region UNDYM_2026 PF06429 Flagellar basal body rod FlgEFG protein C-terminal UNDYM_2026 PF00460 Flagella basal body rod protein UNDYM_2026 PF07559 Flagellar basal body protein FlaE UNDYM_2027 PF00460 Flagella basal body rod protein UNDYM_2027 PF06429 Flagellar basal body rod FlgEFG protein C-terminal UNDYM_2028 PF00460 Flagella basal body rod protein UNDYM_2028 PF06429 Flagellar basal body rod FlgEFG protein C-terminal UNDYM_2029 PF02107 Flagellar L-ring protein UNDYM_2030 PF02119 Flagellar P-ring protein UNDYM_2031 PF10135 Rod binding protein UNDYM_2031 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase UNDYM_2032 PF06429 Flagellar basal body rod FlgEFG protein C-terminal UNDYM_2032 PF00460 Flagella basal body rod protein UNDYM_2033 PF00669 Bacterial flagellin N-terminal helical region UNDYM_2035 PF03169 OPT oligopeptide transporter protein UNDYM_2037 PF00929 Exonuclease UNDYM_2038 PF00854 POT family UNDYM_2039 PF02625 XdhC and CoxI family UNDYM_2039 PF13478 XdhC Rossmann domain UNDYM_2040 PF02567 Phenazine biosynthesis-like protein UNDYM_2041 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase UNDYM_2041 PF00925 GTP cyclohydrolase II UNDYM_2042 PF00885 6,7-dimethyl-8-ribityllumazine synthase UNDYM_2043 PF01029 NusB family UNDYM_2044 PF00155 Aminotransferase class I and II UNDYM_2046 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UNDYM_2048 PF13593 SBF-like CPA transporter family (DUF4137) UNDYM_2049 PF01261 Xylose isomerase-like TIM barrel UNDYM_2050 PF00107 Zinc-binding dehydrogenase UNDYM_2050 PF16884 N-terminal domain of oxidoreductase UNDYM_2051 PF00551 Formyl transferase UNDYM_2052 PF07152 YaeQ protein UNDYM_2055 PF02230 Phospholipase/Carboxylesterase UNDYM_2056 PF04307 LexA-binding, inner membrane-associated putative hydrolase UNDYM_2057 PF00994 Probable molybdopterin binding domain UNDYM_2058 PF04751 Protein of unknown function (DUF615) UNDYM_2059 PF01523 Putative modulator of DNA gyrase UNDYM_2060 PF00005 ABC transporter UNDYM_2061 PF00005 ABC transporter UNDYM_2061 PF12399 Branched-chain amino acid ATP-binding cassette transporter UNDYM_2062 PF11862 Domain of unknown function (DUF3382) UNDYM_2062 PF02653 Branched-chain amino acid transport system / permease component UNDYM_2063 PF02653 Branched-chain amino acid transport system / permease component UNDYM_2064 PF13458 Periplasmic binding protein UNDYM_2065 PF00206 Lyase UNDYM_2065 PF14698 Argininosuccinate lyase C-terminal UNDYM_2066 PF06580 Histidine kinase UNDYM_2066 PF07694 5TMR of 5TMR-LYT UNDYM_2066 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UNDYM_2067 PF00072 Response regulator receiver domain UNDYM_2067 PF04397 LytTr DNA-binding domain UNDYM_2068 PF03641 Possible lysine decarboxylase UNDYM_2068 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases UNDYM_2068 PF11892 Domain of unknown function (DUF3412) UNDYM_2069 PF00072 Response regulator receiver domain UNDYM_2069 PF01584 CheW-like domain UNDYM_2072 PF01431 Peptidase family M13 UNDYM_2072 PF05649 Peptidase family M13 UNDYM_2073 PF02445 Quinolinate synthetase A protein UNDYM_2074 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain UNDYM_2074 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain UNDYM_2077 PF02687 FtsX-like permease family UNDYM_2077 PF12704 MacB-like periplasmic core domain UNDYM_2077 PF00005 ABC transporter UNDYM_2080 PF00005 ABC transporter UNDYM_2081 PF00890 FAD binding domain UNDYM_2081 PF02910 Fumarate reductase flavoprotein C-term UNDYM_2082 PF00216 Bacterial DNA-binding protein UNDYM_2083 PF13145 PPIC-type PPIASE domain UNDYM_2084 PF00115 Cytochrome C and Quinol oxidase polypeptide I UNDYM_2086 PF13442 Cytochrome C oxidase, cbb3-type, subunit III UNDYM_2086 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP UNDYM_2087 PF13746 4Fe-4S dicluster domain UNDYM_2087 PF12801 4Fe-4S binding domain UNDYM_2087 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase UNDYM_2090 PF06969 HemN C-terminal domain UNDYM_2090 PF04055 Radical SAM superfamily UNDYM_2093 PF07730 Histidine kinase UNDYM_2093 PF05231 MASE1 UNDYM_2093 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UNDYM_2096 PF13545 Crp-like helix-turn-helix domain UNDYM_2096 PF00027 Cyclic nucleotide-binding domain UNDYM_2097 PF00072 Response regulator receiver domain UNDYM_2097 PF01339 CheB methylesterase UNDYM_2098 PF00196 Bacterial regulatory proteins, luxR family UNDYM_2098 PF00072 Response regulator receiver domain UNDYM_2101 PF06224 Winged helix DNA-binding domain UNDYM_2102 PF00579 tRNA synthetases class I (W and Y) UNDYM_2103 PF03900 Porphobilinogen deaminase, C-terminal domain UNDYM_2103 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain UNDYM_2104 PF02602 Uroporphyrinogen-III synthase HemD UNDYM_2105 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase UNDYM_2107 PF00719 Inorganic pyrophosphatase UNDYM_2108 PF03793 PASTA domain UNDYM_2108 PF00069 Protein kinase domain UNDYM_2110 PF00795 Carbon-nitrogen hydrolase UNDYM_2110 PF02540 NAD synthase UNDYM_2111 PF00543 Nitrogen regulatory protein P-II UNDYM_2113 PF01713 Smr domain UNDYM_2115 PF07992 Pyridine nucleotide-disulphide oxidoreductase UNDYM_2116 PF01580 FtsK/SpoIIIE family UNDYM_2116 PF09397 Ftsk gamma domain UNDYM_2116 PF17854 FtsK alpha domain UNDYM_2116 PF13491 4TM region of DNA translocase FtsK/SpoIIIE UNDYM_2117 PF13491 4TM region of DNA translocase FtsK/SpoIIIE UNDYM_2117 PF17854 FtsK alpha domain UNDYM_2117 PF09397 Ftsk gamma domain UNDYM_2117 PF01580 FtsK/SpoIIIE family UNDYM_2118 PF03548 Outer membrane lipoprotein carrier protein LolA UNDYM_2119 PF00004 ATPase family associated with various cellular activities (AAA) UNDYM_2119 PF16193 AAA C-terminal domain UNDYM_2119 PF12002 MgsA AAA+ ATPase C terminal UNDYM_2121 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) UNDYM_2121 PF02403 Seryl-tRNA synthetase N-terminal domain UNDYM_2122 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) UNDYM_2122 PF02403 Seryl-tRNA synthetase N-terminal domain UNDYM_2123 PF03707 Bacterial signalling protein N terminal repeat UNDYM_2123 PF00563 EAL domain UNDYM_2123 PF00990 Diguanylate cyclase, GGDEF domain UNDYM_2123 PF13188 PAS domain UNDYM_2130 PF00005 ABC transporter UNDYM_2132 PF02350 UDP-N-acetylglucosamine 2-epimerase UNDYM_2134 PF01757 Acyltransferase family UNDYM_2135 PF13640 2OG-Fe(II) oxygenase superfamily UNDYM_2135 PF18331 PKHD-type hydroxylase C-terminal domain UNDYM_2136 PF00593 TonB dependent receptor UNDYM_2136 PF07715 TonB-dependent Receptor Plug Domain UNDYM_2138 PF00994 Probable molybdopterin binding domain UNDYM_2138 PF03454 MoeA C-terminal region (domain IV) UNDYM_2138 PF03453 MoeA N-terminal region (domain I and II) UNDYM_2139 PF02597 ThiS family UNDYM_2140 PF02391 MoaE protein UNDYM_2141 PF02537 CrcB-like protein, Camphor Resistance (CrcB) UNDYM_2143 PF00561 alpha/beta hydrolase fold UNDYM_2145 PF00004 ATPase family associated with various cellular activities (AAA) UNDYM_2145 PF02861 Clp amino terminal domain, pathogenicity island component UNDYM_2145 PF10431 C-terminal, D2-small domain, of ClpB protein UNDYM_2145 PF17871 AAA lid domain UNDYM_2145 PF07724 AAA domain (Cdc48 subfamily) UNDYM_2146 PF00004 ATPase family associated with various cellular activities (AAA) UNDYM_2146 PF07724 AAA domain (Cdc48 subfamily) UNDYM_2146 PF17871 AAA lid domain UNDYM_2146 PF02861 Clp amino terminal domain, pathogenicity island component UNDYM_2146 PF10431 C-terminal, D2-small domain, of ClpB protein UNDYM_2150 PF03737 Aldolase/RraA UNDYM_2154 PF01026 TatD related DNase UNDYM_2155 PF03772 Competence protein UNDYM_2155 PF00753 Metallo-beta-lactamase superfamily UNDYM_2156 PF00561 alpha/beta hydrolase fold UNDYM_2156 PF08386 TAP-like protein UNDYM_2158 PF06418 CTP synthase N-terminus UNDYM_2158 PF00117 Glutamine amidotransferase class-I UNDYM_2159 PF03952 Enolase, N-terminal domain UNDYM_2159 PF00113 Enolase, C-terminal TIM barrel domain UNDYM_2160 PF04977 Septum formation initiator UNDYM_2163 PF00005 ABC transporter UNDYM_2164 PF00005 ABC transporter UNDYM_2164 PF12399 Branched-chain amino acid ATP-binding cassette transporter UNDYM_2166 PF02653 Branched-chain amino acid transport system / permease component UNDYM_2167 PF00501 AMP-binding enzyme UNDYM_2167 PF13193 AMP-binding enzyme C-terminal domain UNDYM_2169 PF01494 FAD binding domain UNDYM_2172 PF00378 Enoyl-CoA hydratase/isomerase UNDYM_2173 PF02771 Acyl-CoA dehydrogenase, N-terminal domain UNDYM_2173 PF02770 Acyl-CoA dehydrogenase, middle domain UNDYM_2173 PF00441 Acyl-CoA dehydrogenase, C-terminal domain UNDYM_2176 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain UNDYM_2176 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain UNDYM_2176 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain UNDYM_2177 PF02770 Acyl-CoA dehydrogenase, middle domain UNDYM_2177 PF00441 Acyl-CoA dehydrogenase, C-terminal domain UNDYM_2177 PF02771 Acyl-CoA dehydrogenase, N-terminal domain UNDYM_2179 PF18158 Adaptive response protein AidB N-terminal domain UNDYM_2179 PF02770 Acyl-CoA dehydrogenase, middle domain UNDYM_2179 PF00441 Acyl-CoA dehydrogenase, C-terminal domain UNDYM_2181 PF12170 DNA polymerase III tau subunit V interacting with alpha UNDYM_2181 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding UNDYM_2181 PF12169 DNA polymerase III subunits gamma and tau domain III UNDYM_2182 PF02575 YbaB/EbfC DNA-binding family UNDYM_2183 PF13662 Toprim domain UNDYM_2183 PF02132 RecR protein UNDYM_2185 PF02515 CoA-transferase family III UNDYM_2186 PF01914 MarC family integral membrane protein UNDYM_2190 PF07963 Prokaryotic N-terminal methylation motif UNDYM_2190 PF08334 Type II secretion system (T2SS), protein G UNDYM_2191 PF07963 Prokaryotic N-terminal methylation motif UNDYM_2191 PF12019 Type II transport protein GspH UNDYM_2192 PF07963 Prokaryotic N-terminal methylation motif UNDYM_2192 PF02501 Type II secretion system (T2SS), protein I UNDYM_2193 PF11612 Type II secretion system (T2SS), protein J UNDYM_2193 PF07963 Prokaryotic N-terminal methylation motif UNDYM_2198 PF03958 Bacterial type II/III secretion system short domain UNDYM_2198 PF00263 Bacterial type II and III secretion system protein UNDYM_2199 PF00437 Type II/IV secretion system protein UNDYM_2200 PF00482 Type II secretion system (T2SS), protein F UNDYM_2203 PF11871 Domain of unknown function (DUF3391) UNDYM_2203 PF01966 HD domain UNDYM_2204 PF08240 Alcohol dehydrogenase GroES-like domain UNDYM_2204 PF00107 Zinc-binding dehydrogenase UNDYM_2205 PF01975 Survival protein SurE UNDYM_2207 PF01476 LysM domain UNDYM_2207 PF01551 Peptidase family M23 UNDYM_2208 PF04545 Sigma-70, region 4 UNDYM_2208 PF04542 Sigma-70 region 2 UNDYM_2208 PF00140 Sigma-70 factor, region 1.2 UNDYM_2208 PF04539 Sigma-70 region 3 UNDYM_2209 PF05958 tRNA (Uracil-5-)-methyltransferase UNDYM_2210 PF00334 Nucleoside diphosphate kinase UNDYM_2211 PF04055 Radical SAM superfamily UNDYM_2213 PF13464 Domain of unknown function (DUF4115) UNDYM_2214 PF04551 GcpE protein UNDYM_2215 PF13393 Histidyl-tRNA synthetase UNDYM_2215 PF03129 Anticodon binding domain UNDYM_2217 PF13360 PQQ-like domain UNDYM_2218 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal UNDYM_2218 PF01926 50S ribosome-binding GTPase UNDYM_2219 PF17209 Hfq protein UNDYM_2220 PF13167 GTP-binding GTPase N-terminal UNDYM_2220 PF01926 50S ribosome-binding GTPase UNDYM_2220 PF16360 GTP-binding GTPase Middle Region UNDYM_2221 PF12221 Bacterial membrane protein N terminal UNDYM_2221 PF01145 SPFH domain / Band 7 family UNDYM_2222 PF01145 SPFH domain / Band 7 family UNDYM_2223 PF13393 Histidyl-tRNA synthetase UNDYM_2224 PF00709 Adenylosuccinate synthetase UNDYM_2225 PF00156 Phosphoribosyl transferase domain UNDYM_2226 PF08206 Ribonuclease B OB domain UNDYM_2226 PF00773 RNB domain UNDYM_2226 PF17876 Cold shock domain UNDYM_2226 PF08461 Ribonuclease R winged-helix domain UNDYM_2226 PF00575 S1 RNA binding domain UNDYM_2227 PF08032 RNA 2'-O ribose methyltransferase substrate binding UNDYM_2227 PF00588 SpoU rRNA Methylase family UNDYM_2228 PF06426 Serine acetyltransferase, N-terminal UNDYM_2228 PF00132 Bacterial transferase hexapeptide (six repeats) UNDYM_2229 PF03853 YjeF-related protein N-terminus UNDYM_2229 PF01256 Carbohydrate kinase UNDYM_2230 PF01311 Bacterial export proteins, family 1 UNDYM_2231 PF01311 Bacterial export proteins, family 1 UNDYM_2232 PF01313 Bacterial export proteins, family 3 UNDYM_2233 PF00813 FliP family UNDYM_2234 PF04347 Flagellar biosynthesis protein, FliO UNDYM_2235 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term UNDYM_2235 PF16973 Flagellar motor switch protein FliN N-terminal UNDYM_2236 PF02154 Flagellar motor switch protein FliM UNDYM_2236 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term UNDYM_2239 PF02050 Flagellar FliJ protein UNDYM_2240 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain UNDYM_2240 PF18269 T3SS EscN ATPase C-terminal domain UNDYM_2241 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain UNDYM_2241 PF18269 T3SS EscN ATPase C-terminal domain UNDYM_2243 PF14842 FliG N-terminal domain UNDYM_2243 PF14841 FliG middle domain UNDYM_2243 PF01706 FliG C-terminal domain UNDYM_2244 PF01514 Secretory protein of YscJ/FliF family UNDYM_2244 PF08345 Flagellar M-ring protein C-terminal UNDYM_2245 PF02049 Flagellar hook-basal body complex protein FliE UNDYM_2246 PF07238 PilZ domain UNDYM_2246 PF07317 Flagellar regulator YcgR UNDYM_2247 PF01312 FlhB HrpN YscU SpaS Family UNDYM_2250 PF02561 Flagellar protein FliS UNDYM_2251 PF07195 Flagellar hook-associated protein 2 C-terminus UNDYM_2251 PF02465 Flagellar hook-associated protein 2 N-terminus UNDYM_2251 PF07195 Flagellar hook-associated protein 2 C-terminus UNDYM_2251 PF02465 Flagellar hook-associated protein 2 N-terminus UNDYM_2253 PF00669 Bacterial flagellin N-terminal helical region UNDYM_2253 PF00700 Bacterial flagellin C-terminal helical region UNDYM_2253 PF07196 Flagellin hook IN motif UNDYM_2255 PF00483 Nucleotidyl transferase UNDYM_2256 PF16363 GDP-mannose 4,6 dehydratase UNDYM_2257 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase UNDYM_2258 PF08484 C-methyltransferase C-terminal domain UNDYM_2258 PF08421 Putative zinc binding domain UNDYM_2261 PF04989 Cephalosporin hydroxylase UNDYM_2262 PF00990 Diguanylate cyclase, GGDEF domain UNDYM_2262 PF00072 Response regulator receiver domain UNDYM_2263 PF00072 Response regulator receiver domain UNDYM_2263 PF00196 Bacterial regulatory proteins, luxR family UNDYM_2264 PF01272 Transcription elongation factor, GreA/GreB, C-term UNDYM_2264 PF03449 Transcription elongation factor, N-terminal UNDYM_2266 PF02824 TGS domain UNDYM_2266 PF04607 Region found in RelA / SpoT proteins UNDYM_2266 PF13291 ACT domain UNDYM_2267 PF01192 RNA polymerase Rpb6 UNDYM_2268 PF00625 Guanylate kinase UNDYM_2269 PF03755 YicC-like family, N-terminal region UNDYM_2269 PF08340 Domain of unknown function (DUF1732) UNDYM_2270 PF00069 Protein kinase domain UNDYM_2272 PF03725 3' exoribonuclease family, domain 2 UNDYM_2272 PF01138 3' exoribonuclease family, domain 1 UNDYM_2273 PF01725 Ham1 family UNDYM_2274 PF04055 Radical SAM superfamily UNDYM_2274 PF06969 HemN C-terminal domain UNDYM_2276 PF00563 EAL domain UNDYM_2276 PF00990 Diguanylate cyclase, GGDEF domain UNDYM_2276 PF03707 Bacterial signalling protein N terminal repeat UNDYM_2289 PF02796 Helix-turn-helix domain of resolvase UNDYM_2289 PF00239 Resolvase, N terminal domain UNDYM_2291 PF00589 Phage integrase family UNDYM_2301 PF01381 Helix-turn-helix UNDYM_2311 PF00665 Integrase core domain UNDYM_2316 PF02384 N-6 DNA Methylase UNDYM_2317 PF01420 Type I restriction modification DNA specificity domain UNDYM_2319 PF18766 SWI2/SNF2 ATPase UNDYM_2319 PF11867 Domain of unknown function (DUF3387) UNDYM_2319 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) UNDYM_2323 PF17657 Bacterial DNA polymerase III alpha subunit finger domain UNDYM_2323 PF07733 Bacterial DNA polymerase III alpha NTPase domain UNDYM_2323 PF14579 Helix-hairpin-helix motif UNDYM_2323 PF02811 PHP domain UNDYM_2331 PF00589 Phage integrase family UNDYM_2331 PF13356 Arm DNA-binding domain UNDYM_2340 PF01258 Prokaryotic dksA/traR C4-type zinc finger UNDYM_2348 PF02913 FAD linked oxidases, C-terminal domain UNDYM_2348 PF01565 FAD binding domain UNDYM_2349 PF01266 FAD dependent oxidoreductase UNDYM_2349 PF16901 C-terminal domain of alpha-glycerophosphate oxidase UNDYM_2350 PF01266 FAD dependent oxidoreductase UNDYM_2350 PF16901 C-terminal domain of alpha-glycerophosphate oxidase UNDYM_2351 PF02782 FGGY family of carbohydrate kinases, C-terminal domain UNDYM_2351 PF00370 FGGY family of carbohydrate kinases, N-terminal domain UNDYM_2353 PF00072 Response regulator receiver domain UNDYM_2353 PF02954 Bacterial regulatory protein, Fis family UNDYM_2353 PF00158 Sigma-54 interaction domain UNDYM_2354 PF00072 Response regulator receiver domain UNDYM_2355 PF02954 Bacterial regulatory protein, Fis family UNDYM_2355 PF00158 Sigma-54 interaction domain UNDYM_2355 PF00072 Response regulator receiver domain UNDYM_2356 PF00072 Response regulator receiver domain UNDYM_2356 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UNDYM_2356 PF13188 PAS domain UNDYM_2356 PF08448 PAS fold UNDYM_2356 PF00512 His Kinase A (phospho-acceptor) domain UNDYM_2357 PF00563 EAL domain UNDYM_2357 PF00498 FHA domain UNDYM_2357 PF00990 Diguanylate cyclase, GGDEF domain UNDYM_2358 PF00512 His Kinase A (phospho-acceptor) domain UNDYM_2358 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UNDYM_2360 PF02653 Branched-chain amino acid transport system / permease component UNDYM_2361 PF02653 Branched-chain amino acid transport system / permease component UNDYM_2362 PF12399 Branched-chain amino acid ATP-binding cassette transporter UNDYM_2362 PF00005 ABC transporter UNDYM_2363 PF00005 ABC transporter UNDYM_2364 PF01774 UreD urease accessory protein UNDYM_2366 PF03466 LysR substrate binding domain UNDYM_2366 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UNDYM_2368 PF00291 Pyridoxal-phosphate dependent enzyme UNDYM_2371 PF04542 Sigma-70 region 2 UNDYM_2371 PF08281 Sigma-70, region 4 UNDYM_2372 PF00547 Urease, gamma subunit UNDYM_2373 PF00699 Urease beta subunit UNDYM_2374 PF00449 Urease alpha-subunit, N-terminal domain UNDYM_2374 PF01979 Amidohydrolase family UNDYM_2375 PF05194 UreE urease accessory protein, C-terminal domain UNDYM_2375 PF02814 UreE urease accessory protein, N-terminal domain UNDYM_2376 PF01730 UreF UNDYM_2377 PF02492 CobW/HypB/UreG, nucleotide-binding domain UNDYM_2378 PF04955 HupE / UreJ protein UNDYM_2379 PF00701 Dihydrodipicolinate synthetase family UNDYM_2380 PF01266 FAD dependent oxidoreductase UNDYM_2382 PF04324 BFD-like [2Fe-2S] binding domain UNDYM_2382 PF07992 Pyridine nucleotide-disulphide oxidoreductase UNDYM_2383 PF04324 BFD-like [2Fe-2S] binding domain UNDYM_2383 PF07992 Pyridine nucleotide-disulphide oxidoreductase UNDYM_2384 PF00171 Aldehyde dehydrogenase family UNDYM_2387 PF17932 Tetracyclin repressor-like, C-terminal domain UNDYM_2387 PF00440 Bacterial regulatory proteins, tetR family UNDYM_2388 PF00441 Acyl-CoA dehydrogenase, C-terminal domain UNDYM_2388 PF02770 Acyl-CoA dehydrogenase, middle domain UNDYM_2388 PF02771 Acyl-CoA dehydrogenase, N-terminal domain UNDYM_2389 PF02515 CoA-transferase family III UNDYM_2390 PF00672 HAMP domain UNDYM_2390 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) UNDYM_2390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UNDYM_2390 PF00072 Response regulator receiver domain UNDYM_2390 PF01627 Hpt domain UNDYM_2390 PF00512 His Kinase A (phospho-acceptor) domain UNDYM_2391 PF01979 Amidohydrolase family UNDYM_2392 PF00155 Aminotransferase class I and II UNDYM_2396 PF00578 AhpC/TSA family UNDYM_2400 PF01177 Asp/Glu/Hydantoin racemase UNDYM_2402 PF03350 Uncharacterized protein family, UPF0114 UNDYM_2403 PF16177 Acetyl-coenzyme A synthetase N-terminus UNDYM_2403 PF00501 AMP-binding enzyme UNDYM_2403 PF13193 AMP-binding enzyme C-terminal domain UNDYM_2404 PF01434 Peptidase family M41 UNDYM_2404 PF17862 AAA+ lid domain UNDYM_2404 PF00004 ATPase family associated with various cellular activities (AAA) UNDYM_2405 PF00034 Cytochrome c UNDYM_2406 PF00034 Cytochrome c UNDYM_2408 PF08007 Cupin superfamily protein UNDYM_2409 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase UNDYM_2410 PF05188 MutS domain II UNDYM_2410 PF01624 MutS domain I UNDYM_2410 PF00488 MutS domain V UNDYM_2410 PF05190 MutS family domain IV UNDYM_2410 PF05192 MutS domain III UNDYM_2412 PF00270 DEAD/DEAH box helicase UNDYM_2412 PF00271 Helicase conserved C-terminal domain UNDYM_2413 PF00459 Inositol monophosphatase family UNDYM_2414 PF00588 SpoU rRNA Methylase family UNDYM_2416 PF13417 Glutathione S-transferase, N-terminal domain UNDYM_2416 PF14497 Glutathione S-transferase, C-terminal domain UNDYM_2419 PF06733 DEAD_2 UNDYM_2419 PF13307 Helicase C-terminal domain UNDYM_2421 PF05649 Peptidase family M13 UNDYM_2421 PF01431 Peptidase family M13 UNDYM_2422 PF00005 ABC transporter UNDYM_2422 PF08352 Oligopeptide/dipeptide transporter, C-terminal region UNDYM_2423 PF00005 ABC transporter UNDYM_2423 PF08352 Oligopeptide/dipeptide transporter, C-terminal region UNDYM_2424 PF00528 Binding-protein-dependent transport system inner membrane component UNDYM_2424 PF12911 N-terminal TM domain of oligopeptide transport permease C UNDYM_2425 PF00528 Binding-protein-dependent transport system inner membrane component UNDYM_2426 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle UNDYM_2428 PF01368 DHH family UNDYM_2428 PF17768 RecJ OB domain UNDYM_2428 PF02272 DHHA1 domain UNDYM_2430 PF12704 MacB-like periplasmic core domain UNDYM_2430 PF02687 FtsX-like permease family UNDYM_2431 PF00005 ABC transporter UNDYM_2434 PF07690 Major Facilitator Superfamily UNDYM_2436 PF13638 PIN domain UNDYM_2436 PF02562 PhoH-like protein UNDYM_2437 PF00578 AhpC/TSA family UNDYM_2438 PF01522 Polysaccharide deacetylase UNDYM_2439 PF01370 NAD dependent epimerase/dehydratase family UNDYM_2439 PF02911 Formyl transferase, C-terminal domain UNDYM_2439 PF00551 Formyl transferase UNDYM_2440 PF00551 Formyl transferase UNDYM_2440 PF02911 Formyl transferase, C-terminal domain UNDYM_2440 PF01370 NAD dependent epimerase/dehydratase family UNDYM_2441 PF00535 Glycosyl transferase family 2 UNDYM_2442 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family UNDYM_2447 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase UNDYM_2448 PF04430 Protein of unknown function (DUF498/DUF598) UNDYM_2450 PF00155 Aminotransferase class I and II UNDYM_2451 PF01842 ACT domain UNDYM_2451 PF00742 Homoserine dehydrogenase UNDYM_2451 PF03447 Homoserine dehydrogenase, NAD binding domain UNDYM_2455 PF01571 Aminomethyltransferase folate-binding domain UNDYM_2457 PF02618 YceG-like family UNDYM_2458 PF02223 Thymidylate kinase UNDYM_2459 PF09115 DNA polymerase III, delta subunit, C terminal UNDYM_2461 PF00583 Acetyltransferase (GNAT) family UNDYM_2462 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ UNDYM_2463 PF00501 AMP-binding enzyme UNDYM_2463 PF13193 AMP-binding enzyme C-terminal domain UNDYM_2465 PF02653 Branched-chain amino acid transport system / permease component UNDYM_2467 PF00005 ABC transporter UNDYM_2467 PF12399 Branched-chain amino acid ATP-binding cassette transporter UNDYM_2468 PF00005 ABC transporter UNDYM_2469 PF00990 Diguanylate cyclase, GGDEF domain UNDYM_2469 PF07694 5TMR of 5TMR-LYT UNDYM_2470 PF00378 Enoyl-CoA hydratase/isomerase UNDYM_2471 PF00378 Enoyl-CoA hydratase/isomerase UNDYM_2471 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain UNDYM_2471 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain UNDYM_2472 PF12848 ABC transporter UNDYM_2472 PF00005 ABC transporter UNDYM_2474 PF07664 Ferrous iron transport protein B C terminus UNDYM_2474 PF07670 Nucleoside recognition UNDYM_2474 PF02421 Ferrous iron transport protein B UNDYM_2476 PF00583 Acetyltransferase (GNAT) family UNDYM_2476 PF01047 MarR family UNDYM_2482 PF00042 Globin UNDYM_2482 PF00175 Oxidoreductase NAD-binding domain UNDYM_2482 PF00970 Oxidoreductase FAD-binding domain UNDYM_2483 PF02771 Acyl-CoA dehydrogenase, N-terminal domain UNDYM_2483 PF00441 Acyl-CoA dehydrogenase, C-terminal domain UNDYM_2483 PF02770 Acyl-CoA dehydrogenase, middle domain UNDYM_2486 PF03461 TRCF domain UNDYM_2486 PF00271 Helicase conserved C-terminal domain UNDYM_2486 PF17757 UvrB interaction domain UNDYM_2486 PF02559 CarD-like/TRCF domain UNDYM_2486 PF00270 DEAD/DEAH box helicase UNDYM_2487 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase UNDYM_2488 PF02542 YgbB family UNDYM_2490 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase UNDYM_2491 PF00226 DnaJ domain UNDYM_2491 PF01556 DnaJ C terminal domain UNDYM_2491 PF00684 DnaJ central domain UNDYM_2498 PF00465 Iron-containing alcohol dehydrogenase UNDYM_2499 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases UNDYM_2500 PF02545 Maf-like protein UNDYM_2502 PF01783 Ribosomal L32p protein family UNDYM_2503 PF02504 Fatty acid synthesis protein UNDYM_2504 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal UNDYM_2504 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III UNDYM_2505 PF00698 Acyl transferase domain UNDYM_2507 PF00550 Phosphopantetheine attachment site UNDYM_2508 PF00109 Beta-ketoacyl synthase, N-terminal domain UNDYM_2508 PF02801 Beta-ketoacyl synthase, C-terminal domain UNDYM_2509 PF04542 Sigma-70 region 2 UNDYM_2509 PF08281 Sigma-70, region 4 UNDYM_2512 PF13180 PDZ domain UNDYM_2512 PF17820 PDZ domain UNDYM_2514 PF01351 Ribonuclease HII UNDYM_2515 PF00588 SpoU rRNA Methylase family UNDYM_2515 PF08032 RNA 2'-O ribose methyltransferase substrate binding UNDYM_2516 PF03618 Kinase/pyrophosphorylase UNDYM_2517 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain UNDYM_2517 PF00391 PEP-utilising enzyme, mobile domain UNDYM_2517 PF02896 PEP-utilising enzyme, TIM barrel domain UNDYM_2519 PF01145 SPFH domain / Band 7 family UNDYM_2522 PF05114 Protein of unknown function (DUF692) UNDYM_2525 PF01522 Polysaccharide deacetylase UNDYM_2525 PF00457 Glycosyl hydrolases family 11 UNDYM_2527 PF00724 NADH:flavin oxidoreductase / NADH oxidase family UNDYM_2530 PF06167 Glucose-regulated metallo-peptidase M90 UNDYM_2531 PF12848 ABC transporter UNDYM_2531 PF00005 ABC transporter UNDYM_2532 PF05175 Methyltransferase small domain UNDYM_2533 PF01546 Peptidase family M20/M25/M40 UNDYM_2533 PF07687 Peptidase dimerisation domain UNDYM_2534 PF03960 ArsC family UNDYM_2535 PF00437 Type II/IV secretion system protein UNDYM_2536 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal UNDYM_2536 PF14602 Hexapeptide repeat of succinyl-transferase UNDYM_2536 PF00132 Bacterial transferase hexapeptide (six repeats) UNDYM_2537 PF00155 Aminotransferase class I and II UNDYM_2538 PF06470 SMC proteins Flexible Hinge Domain UNDYM_2538 PF02463 RecF/RecN/SMC N terminal domain UNDYM_2540 PF12826 Helix-hairpin-helix motif UNDYM_2540 PF03119 NAD-dependent DNA ligase C4 zinc finger domain UNDYM_2540 PF00533 BRCA1 C Terminus (BRCT) domain UNDYM_2540 PF01653 NAD-dependent DNA ligase adenylation domain UNDYM_2540 PF03120 NAD-dependent DNA ligase OB-fold domain UNDYM_2541 PF00483 Nucleotidyl transferase UNDYM_2542 PF01327 Polypeptide deformylase UNDYM_2543 PF01479 S4 domain UNDYM_2543 PF00849 RNA pseudouridylate synthase UNDYM_2544 PF08335 GlnD PII-uridylyltransferase UNDYM_2544 PF01966 HD domain UNDYM_2544 PF01909 Nucleotidyltransferase domain UNDYM_2545 PF00557 Metallopeptidase family M24 UNDYM_2546 PF00318 Ribosomal protein S2 UNDYM_2547 PF00889 Elongation factor TS UNDYM_2548 PF00696 Amino acid kinase family UNDYM_2549 PF01765 Ribosome recycling factor UNDYM_2550 PF01255 Putative undecaprenyl diphosphate synthase UNDYM_2552 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain UNDYM_2552 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase UNDYM_2552 PF13288 DXP reductoisomerase C-terminal domain UNDYM_2553 PF17820 PDZ domain UNDYM_2553 PF02163 Peptidase family M50 UNDYM_2554 PF07244 Surface antigen variable number repeat UNDYM_2554 PF01103 Surface antigen UNDYM_2556 PF00132 Bacterial transferase hexapeptide (six repeats) UNDYM_2556 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD UNDYM_2557 PF07977 FabA-like domain UNDYM_2558 PF00132 Bacterial transferase hexapeptide (six repeats) UNDYM_2558 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 UNDYM_2559 PF02684 Lipid-A-disaccharide synthetase UNDYM_2560 PF01026 TatD related DNase UNDYM_2561 PF01026 TatD related DNase UNDYM_2562 PF12796 Ankyrin repeats (3 copies) UNDYM_2564 PF00005 ABC transporter UNDYM_2565 PF02811 PHP domain UNDYM_2565 PF14579 Helix-hairpin-helix motif UNDYM_2565 PF17657 Bacterial DNA polymerase III alpha subunit finger domain UNDYM_2565 PF07733 Bacterial DNA polymerase III alpha NTPase domain UNDYM_2570 PF01638 HxlR-like helix-turn-helix UNDYM_2572 PF00501 AMP-binding enzyme UNDYM_2572 PF00668 Condensation domain UNDYM_2572 PF00550 Phosphopantetheine attachment site UNDYM_2572 PF00975 Thioesterase domain UNDYM_2572 PF13193 AMP-binding enzyme C-terminal domain UNDYM_2574 PF03958 Bacterial type II/III secretion system short domain UNDYM_2574 PF00263 Bacterial type II and III secretion system protein UNDYM_2590 PF04011 LemA family UNDYM_2591 PF04536 TPM domain UNDYM_2593 PF00403 Heavy-metal-associated domain UNDYM_2596 PF00873 AcrB/AcrD/AcrF family UNDYM_2597 PF00529 HlyD membrane-fusion protein of T1SS UNDYM_2597 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion UNDYM_2607 PF07732 Multicopper oxidase UNDYM_2607 PF00394 Multicopper oxidase UNDYM_2607 PF07731 Multicopper oxidase UNDYM_2611 PF01526 Tn3 transposase DDE domain UNDYM_2611 PF13700 Domain of unknown function (DUF4158) UNDYM_2616 PF00294 pfkB family carbohydrate kinase UNDYM_2618 PF07690 Major Facilitator Superfamily UNDYM_2620 PF07971 Glycosyl hydrolase family 92 UNDYM_2620 PF17678 Glycosyl hydrolase family 92 N-terminal domain UNDYM_2621 PF00356 Bacterial regulatory proteins, lacI family UNDYM_2628 PF10459 Peptidase S46 UNDYM_2629 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UNDYM_2629 PF00512 His Kinase A (phospho-acceptor) domain UNDYM_2631 PF09084 NMT1/THI5 like UNDYM_2632 PF00491 Arginase family UNDYM_2635 PF00512 His Kinase A (phospho-acceptor) domain UNDYM_2635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UNDYM_2636 PF02082 Transcriptional regulator UNDYM_2638 PF01435 Peptidase family M48 UNDYM_2640 PF00892 EamA-like transporter family UNDYM_2641 PF00043 Glutathione S-transferase, C-terminal domain UNDYM_2641 PF02798 Glutathione S-transferase, N-terminal domain UNDYM_2644 PF02771 Acyl-CoA dehydrogenase, N-terminal domain UNDYM_2644 PF02770 Acyl-CoA dehydrogenase, middle domain UNDYM_2644 PF00441 Acyl-CoA dehydrogenase, C-terminal domain UNDYM_2646 PF01575 MaoC like domain UNDYM_2646 PF00171 Aldehyde dehydrogenase family UNDYM_2647 PF01575 MaoC like domain UNDYM_2651 PF01928 CYTH domain UNDYM_2652 PF00246 Zinc carboxypeptidase UNDYM_2652 PF18027 Cytosolic carboxypeptidase N-terminal domain UNDYM_2653 PF04616 Glycosyl hydrolases family 43 UNDYM_2654 PF06964 Alpha-L-arabinofuranosidase C-terminal domain UNDYM_2657 PF00657 GDSL-like Lipase/Acylhydrolase UNDYM_2660 PF13472 GDSL-like Lipase/Acylhydrolase family UNDYM_2660 PF07859 alpha/beta hydrolase fold UNDYM_2661 PF05336 L-rhamnose mutarotase UNDYM_2662 PF07470 Glycosyl Hydrolase Family 88 UNDYM_2663 PF00295 Glycosyl hydrolases family 28 UNDYM_2665 PF01261 Xylose isomerase-like TIM barrel UNDYM_2666 PF00596 Class II Aldolase and Adducin N-terminal domain UNDYM_2667 PF00455 DeoR C terminal sensor domain UNDYM_2667 PF08220 DeoR-like helix-turn-helix domain UNDYM_2668 PF13407 Periplasmic binding protein domain UNDYM_2669 PF00005 ABC transporter UNDYM_2670 PF02653 Branched-chain amino acid transport system / permease component UNDYM_2671 PF02653 Branched-chain amino acid transport system / permease component UNDYM_2674 PF04616 Glycosyl hydrolases family 43 UNDYM_2674 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain UNDYM_2676 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UNDYM_2676 PF03466 LysR substrate binding domain UNDYM_2678 PF02653 Branched-chain amino acid transport system / permease component UNDYM_2679 PF00005 ABC transporter UNDYM_2680 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family UNDYM_2681 PF08450 SMP-30/Gluconolactonase/LRE-like region UNDYM_2682 PF01081 KDPG and KHG aldolase UNDYM_2683 PF05035 2-keto-3-deoxy-galactonokinase UNDYM_2684 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain UNDYM_2684 PF13378 Enolase C-terminal domain-like UNDYM_2685 PF12708 Pectate lyase superfamily protein UNDYM_2685 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) UNDYM_2685 PF08548 Peptidase M10 serralysin C terminal UNDYM_2687 PF18370 Rhamnogalacturonan I lyases beta-sheet domain UNDYM_2690 PF13472 GDSL-like Lipase/Acylhydrolase family UNDYM_2691 PF00657 GDSL-like Lipase/Acylhydrolase UNDYM_2694 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain UNDYM_2698 PF00892 EamA-like transporter family UNDYM_2699 PF01965 DJ-1/PfpI family UNDYM_2699 PF12833 Helix-turn-helix domain UNDYM_2702 PF14821 Threonine synthase N terminus UNDYM_2702 PF00291 Pyridoxal-phosphate dependent enzyme UNDYM_2703 PF02634 FdhD/NarQ family UNDYM_2704 PF00384 Molybdopterin oxidoreductase UNDYM_2706 PF00155 Aminotransferase class I and II UNDYM_2707 PF01370 NAD dependent epimerase/dehydratase family UNDYM_2708 PF03315 Serine dehydratase beta chain UNDYM_2708 PF03313 Serine dehydratase alpha chain UNDYM_2713 PF01037 Lrp/AsnC ligand binding domain UNDYM_2713 PF13404 AsnC-type helix-turn-helix domain UNDYM_2714 PF00158 Sigma-54 interaction domain UNDYM_2714 PF00989 PAS fold UNDYM_2714 PF02954 Bacterial regulatory protein, Fis family UNDYM_2715 PF00171 Aldehyde dehydrogenase family UNDYM_2717 PF02082 Transcriptional regulator UNDYM_2718 PF00266 Aminotransferase class-V UNDYM_2719 PF01592 NifU-like N terminal domain UNDYM_2720 PF01521 Iron-sulphur cluster biosynthesis UNDYM_2721 PF07743 HSCB C-terminal oligomerisation domain UNDYM_2722 PF00012 Hsp70 protein UNDYM_2723 PF00111 2Fe-2S iron-sulfur cluster binding domain UNDYM_2724 PF04384 Iron-sulphur cluster assembly UNDYM_2725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UNDYM_2725 PF00512 His Kinase A (phospho-acceptor) domain UNDYM_2726 PF00303 Thymidylate synthase UNDYM_2727 PF00186 Dihydrofolate reductase UNDYM_2729 PF06629 MltA-interacting protein MipA UNDYM_2730 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain UNDYM_2730 PF01276 Orn/Lys/Arg decarboxylase, major domain UNDYM_2730 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain UNDYM_2734 PF04960 Glutaminase UNDYM_2735 PF00692 dUTPase UNDYM_2736 PF11842 Domain of unknown function (DUF3362) UNDYM_2736 PF08497 Radical SAM N-terminal UNDYM_2736 PF04055 Radical SAM superfamily UNDYM_2738 PF03462 PCRF domain UNDYM_2738 PF00472 RF-1 domain UNDYM_2739 PF00152 tRNA synthetases class II (D, K and N) UNDYM_2739 PF01336 OB-fold nucleic acid binding domain UNDYM_2740 PF00005 ABC transporter UNDYM_2740 PF00664 ABC transporter transmembrane region UNDYM_2742 PF01593 Flavin containing amine oxidoreductase UNDYM_2744 PF00005 ABC transporter UNDYM_2744 PF00571 CBS domain UNDYM_2746 PF01053 Cys/Met metabolism PLP-dependent enzyme UNDYM_2747 PF00561 alpha/beta hydrolase fold UNDYM_2748 PF01810 LysE type translocator UNDYM_2752 PF00672 HAMP domain UNDYM_2752 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UNDYM_2752 PF02203 Tar ligand binding domain homologue UNDYM_2755 PF03061 Thioesterase superfamily UNDYM_2756 PF00561 alpha/beta hydrolase fold UNDYM_2757 PF00106 short chain dehydrogenase UNDYM_2759 PF16884 N-terminal domain of oxidoreductase UNDYM_2759 PF00107 Zinc-binding dehydrogenase UNDYM_2763 PF12806 Acetyl-CoA dehydrogenase C-terminal like UNDYM_2763 PF02771 Acyl-CoA dehydrogenase, N-terminal domain UNDYM_2763 PF02770 Acyl-CoA dehydrogenase, middle domain UNDYM_2763 PF00441 Acyl-CoA dehydrogenase, C-terminal domain UNDYM_2764 PF02803 Thiolase, C-terminal domain UNDYM_2764 PF00108 Thiolase, N-terminal domain UNDYM_2765 PF08946 Osmosensory transporter coiled coil UNDYM_2765 PF00083 Sugar (and other) transporter UNDYM_2766 PF02016 LD-carboxypeptidase N-terminal domain UNDYM_2766 PF17676 LD-carboxypeptidase C-terminal domain UNDYM_2767 PF14437 MafB19-like deaminase UNDYM_2768 PF01242 6-pyruvoyl tetrahydropterin synthase UNDYM_2771 PF02540 NAD synthase UNDYM_2771 PF00958 GMP synthase C terminal domain UNDYM_2771 PF00117 Glutamine amidotransferase class-I UNDYM_2774 PF00571 CBS domain UNDYM_2774 PF00478 IMP dehydrogenase / GMP reductase domain UNDYM_2776 PF03658 RnfH family Ubiquitin UNDYM_2779 PF01668 SmpB protein UNDYM_2781 PF00486 Transcriptional regulatory protein, C terminal UNDYM_2781 PF00072 Response regulator receiver domain UNDYM_2782 PF00672 HAMP domain UNDYM_2782 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UNDYM_2782 PF00512 His Kinase A (phospho-acceptor) domain UNDYM_2786 PF00155 Aminotransferase class I and II UNDYM_2790 PF03969 AFG1-like ATPase UNDYM_2791 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain UNDYM_2791 PF07992 Pyridine nucleotide-disulphide oxidoreductase UNDYM_2793 PF00364 Biotin-requiring enzyme UNDYM_2793 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) UNDYM_2793 PF02817 e3 binding domain UNDYM_2794 PF02779 Transketolase, pyrimidine binding domain UNDYM_2794 PF16870 2-oxoglutarate dehydrogenase C-terminal UNDYM_2794 PF00676 Dehydrogenase E1 component UNDYM_2794 PF16078 2-oxoglutarate dehydrogenase N-terminus UNDYM_2795 PF00285 Citrate synthase, C-terminal domain UNDYM_2796 PF03937 Flavinator of succinate dehydrogenase UNDYM_2797 PF13085 2Fe-2S iron-sulfur cluster binding domain UNDYM_2798 PF02910 Fumarate reductase flavoprotein C-term UNDYM_2798 PF00890 FAD binding domain UNDYM_2800 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit UNDYM_2801 PF00392 Bacterial regulatory proteins, gntR family UNDYM_2801 PF07702 UTRA domain UNDYM_2802 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain UNDYM_2802 PF00056 lactate/malate dehydrogenase, NAD binding domain UNDYM_2805 PF00330 Aconitase family (aconitate hydratase) UNDYM_2805 PF00694 Aconitase C-terminal domain UNDYM_2807 PF01053 Cys/Met metabolism PLP-dependent enzyme UNDYM_2810 PF04055 Radical SAM superfamily UNDYM_2810 PF18693 TRAM domain UNDYM_2810 PF00919 Uncharacterized protein family UPF0004 UNDYM_2811 PF07879 PHB/PHA accumulation regulator DNA-binding domain UNDYM_2811 PF05233 PHB accumulation regulatory domain UNDYM_2812 PF00106 short chain dehydrogenase UNDYM_2813 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus UNDYM_2816 PF00849 RNA pseudouridylate synthase UNDYM_2816 PF01479 S4 domain UNDYM_2817 PF13525 Outer membrane lipoprotein UNDYM_2818 PF03883 Peroxide stress protein YaaA UNDYM_2820 PF04344 Chemotaxis phosphatase, CheZ UNDYM_2821 PF01584 CheW-like domain UNDYM_2821 PF00072 Response regulator receiver domain UNDYM_2821 PF01627 Hpt domain UNDYM_2821 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UNDYM_2821 PF02895 Signal transducing histidine kinase, homodimeric domain UNDYM_2822 PF02696 Uncharacterized ACR, YdiU/UPF0061 family UNDYM_2823 PF01641 SelR domain UNDYM_2824 PF04279 Intracellular septation protein A UNDYM_2828 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal UNDYM_2828 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain UNDYM_2828 PF02769 AIR synthase related protein, C-terminal domain UNDYM_2829 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain UNDYM_2829 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal UNDYM_2829 PF02769 AIR synthase related protein, C-terminal domain UNDYM_2830 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal UNDYM_2830 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain UNDYM_2830 PF02769 AIR synthase related protein, C-terminal domain UNDYM_2831 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase UNDYM_2833 PF00072 Response regulator receiver domain UNDYM_2834 PF00072 Response regulator receiver domain UNDYM_2834 PF01339 CheB methylesterase UNDYM_2835 PF03975 CheD chemotactic sensory transduction UNDYM_2836 PF03705 CheR methyltransferase, all-alpha domain UNDYM_2836 PF01739 CheR methyltransferase, SAM binding domain UNDYM_2837 PF00672 HAMP domain UNDYM_2837 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UNDYM_2837 PF02203 Tar ligand binding domain homologue UNDYM_2838 PF01584 CheW-like domain UNDYM_2839 PF01584 CheW-like domain UNDYM_2839 PF01627 Hpt domain UNDYM_2839 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UNDYM_2839 PF02895 Signal transducing histidine kinase, homodimeric domain UNDYM_2839 PF09078 CheY binding UNDYM_2840 PF00072 Response regulator receiver domain UNDYM_2842 PF13677 Membrane MotB of proton-channel complex MotA/MotB UNDYM_2842 PF00691 OmpA family UNDYM_2843 PF01618 MotA/TolQ/ExbB proton channel family UNDYM_2845 PF05280 Flagellar transcriptional activator (FlhC) UNDYM_2846 PF05247 Flagellar transcriptional activator (FlhD) UNDYM_2847 PF00929 Exonuclease UNDYM_2848 PF11734 TilS substrate C-terminal domain UNDYM_2848 PF09179 TilS substrate binding domain UNDYM_2848 PF01171 PP-loop family UNDYM_2849 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit UNDYM_2852 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD UNDYM_2853 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD UNDYM_2854 PF00149 Calcineurin-like phosphoesterase UNDYM_2855 PF00005 ABC transporter UNDYM_2856 PF13472 GDSL-like Lipase/Acylhydrolase family UNDYM_2857 PF00581 Rhodanese-like domain UNDYM_2859 PF00403 Heavy-metal-associated domain UNDYM_2860 PF01343 Peptidase family S49 UNDYM_2860 PF06965 Na+/H+ antiporter 1 UNDYM_2862 PF13419 Haloacid dehalogenase-like hydrolase UNDYM_2863 PF01479 S4 domain UNDYM_2863 PF00849 RNA pseudouridylate synthase UNDYM_2864 PF12111 Polyribonucleotide phosphorylase C terminal UNDYM_2864 PF10150 Ribonuclease E/G family UNDYM_2864 PF00575 S1 RNA binding domain UNDYM_2866 PF04055 Radical SAM superfamily UNDYM_2866 PF06463 Molybdenum Cofactor Synthesis C UNDYM_2867 PF12804 MobA-like NTP transferase domain UNDYM_2868 PF00994 Probable molybdopterin binding domain UNDYM_2868 PF03454 MoeA C-terminal region (domain IV) UNDYM_2868 PF03453 MoeA N-terminal region (domain I and II) UNDYM_2869 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD UNDYM_2873 PF00563 EAL domain UNDYM_2873 PF00990 Diguanylate cyclase, GGDEF domain UNDYM_2873 PF03707 Bacterial signalling protein N terminal repeat UNDYM_2875 PF09278 MerR, DNA binding UNDYM_2875 PF00376 MerR family regulatory protein UNDYM_2876 PF02646 RmuC family UNDYM_2878 PF02798 Glutathione S-transferase, N-terminal domain UNDYM_2878 PF14834 Glutathione S-transferase, C-terminal domain UNDYM_2880 PF01053 Cys/Met metabolism PLP-dependent enzyme UNDYM_2881 PF00561 alpha/beta hydrolase fold UNDYM_2882 PF00501 AMP-binding enzyme UNDYM_2882 PF13193 AMP-binding enzyme C-terminal domain UNDYM_2886 PF04305 Protein of unknown function (DUF455) UNDYM_2887 PF00132 Bacterial transferase hexapeptide (six repeats) UNDYM_2888 PF01430 Hsp33 protein UNDYM_2890 PF13411 MerR HTH family regulatory protein UNDYM_2893 PF02743 Cache domain UNDYM_2893 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UNDYM_2893 PF00512 His Kinase A (phospho-acceptor) domain UNDYM_2894 PF00005 ABC transporter UNDYM_2894 PF13732 Domain of unknown function (DUF4162) UNDYM_2897 PF01432 Peptidase family M3 UNDYM_2897 PF08439 Oligopeptidase F UNDYM_2898 PF10459 Peptidase S46 UNDYM_2900 PF00892 EamA-like transporter family UNDYM_2902 PF00270 DEAD/DEAH box helicase UNDYM_2902 PF11898 Domain of unknown function (DUF3418) UNDYM_2902 PF04408 Helicase associated domain (HA2) UNDYM_2902 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold UNDYM_2902 PF00271 Helicase conserved C-terminal domain UNDYM_2904 PF00696 Amino acid kinase family UNDYM_2904 PF00583 Acetyltransferase (GNAT) family UNDYM_2905 PF04362 Bacterial Fe(2+) trafficking UNDYM_2906 PF00484 Carbonic anhydrase UNDYM_2907 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) UNDYM_2908 PF01636 Phosphotransferase enzyme family UNDYM_2909 PF03695 Uncharacterised protein family (UPF0149) UNDYM_2909 PF02810 SEC-C motif UNDYM_2911 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain UNDYM_2911 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain UNDYM_2912 PF11953 Domain of unknown function (DUF3470) UNDYM_2912 PF00037 4Fe-4S binding domain UNDYM_2914 PF00072 Response regulator receiver domain UNDYM_2915 PF01627 Hpt domain UNDYM_2915 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) UNDYM_2915 PF00072 Response regulator receiver domain UNDYM_2915 PF00512 His Kinase A (phospho-acceptor) domain UNDYM_2915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UNDYM_2915 PF00672 HAMP domain UNDYM_2917 PF04060 Putative Fe-S cluster UNDYM_2918 PF10576 Iron-sulfur binding domain of endonuclease III UNDYM_2918 PF00633 Helix-hairpin-helix motif UNDYM_2918 PF00730 HhH-GPD superfamily base excision DNA repair protein UNDYM_2919 PF00881 Nitroreductase family UNDYM_2921 PF06804 NlpB/DapX lipoprotein UNDYM_2922 PF00701 Dihydrodipicolinate synthetase family UNDYM_2924 PF02163 Peptidase family M50 UNDYM_2925 PF01300 Telomere recombination UNDYM_2926 PF01435 Peptidase family M48 UNDYM_2927 PF02811 PHP domain UNDYM_2931 PF00005 ABC transporter UNDYM_2932 PF00156 Phosphoribosyl transferase domain UNDYM_2934 PF05036 Sporulation related domain UNDYM_2935 PF02875 Mur ligase family, glutamate ligase domain UNDYM_2935 PF08245 Mur ligase middle domain UNDYM_2936 PF17848 Acetyl-coA carboxylase zinc finger domain UNDYM_2936 PF01039 Carboxyl transferase domain UNDYM_2937 PF00290 Tryptophan synthase alpha chain UNDYM_2938 PF00291 Pyridoxal-phosphate dependent enzyme UNDYM_2939 PF00291 Pyridoxal-phosphate dependent enzyme UNDYM_2940 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase UNDYM_2943 PF03808 Glycosyl transferase WecB/TagA/CpsF family UNDYM_2944 PF00463 Isocitrate lyase family UNDYM_2947 PF01757 Acyltransferase family UNDYM_2948 PF00535 Glycosyl transferase family 2 UNDYM_2949 PF02706 Chain length determinant protein UNDYM_2949 PF13807 G-rich domain on putative tyrosine kinase UNDYM_2949 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain UNDYM_2952 PF01501 Glycosyl transferase family 8 UNDYM_2952 PF00535 Glycosyl transferase family 2 UNDYM_2953 PF02397 Bacterial sugar transferase UNDYM_2955 PF03631 Virulence factor BrkB UNDYM_2956 PF03358 NADPH-dependent FMN reductase UNDYM_2958 PF02913 FAD linked oxidases, C-terminal domain UNDYM_2958 PF01565 FAD binding domain UNDYM_2959 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UNDYM_2959 PF00672 HAMP domain UNDYM_2959 PF02203 Tar ligand binding domain homologue UNDYM_2960 PF00149 Calcineurin-like phosphoesterase UNDYM_2963 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I UNDYM_2963 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain UNDYM_2963 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III UNDYM_2963 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II UNDYM_2964 PF00809 Pterin binding enzyme UNDYM_2965 PF17862 AAA+ lid domain UNDYM_2965 PF06480 FtsH Extracellular UNDYM_2965 PF01434 Peptidase family M41 UNDYM_2965 PF00004 ATPase family associated with various cellular activities (AAA) UNDYM_2966 PF01728 FtsJ-like methyltransferase UNDYM_2968 PF01272 Transcription elongation factor, GreA/GreB, C-term UNDYM_2968 PF03449 Transcription elongation factor, N-terminal UNDYM_2969 PF02142 MGS-like domain UNDYM_2969 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain UNDYM_2969 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain UNDYM_2970 PF00117 Glutamine amidotransferase class-I UNDYM_2970 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain UNDYM_2971 PF03928 Haem-degrading UNDYM_2973 PF01734 Patatin-like phospholipase UNDYM_2974 PF02872 5'-nucleotidase, C-terminal domain UNDYM_2974 PF00149 Calcineurin-like phosphoesterase UNDYM_2976 PF01566 Natural resistance-associated macrophage protein UNDYM_2977 PF00990 Diguanylate cyclase, GGDEF domain UNDYM_2977 PF00072 Response regulator receiver domain UNDYM_2978 PF00072 Response regulator receiver domain UNDYM_2978 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) UNDYM_2978 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UNDYM_2978 PF00512 His Kinase A (phospho-acceptor) domain UNDYM_2978 PF01627 Hpt domain UNDYM_2978 PF00672 HAMP domain UNDYM_2986 PF01207 Dihydrouridine synthase (Dus) UNDYM_2992 PF01509 TruB family pseudouridylate synthase (N terminal domain) UNDYM_2992 PF16198 tRNA pseudouridylate synthase B C-terminal domain UNDYM_2992 PF09157 Pseudouridine synthase II TruB, C-terminal UNDYM_2993 PF02033 Ribosome-binding factor A UNDYM_2994 PF04760 Translation initiation factor IF-2, N-terminal region UNDYM_2994 PF00009 Elongation factor Tu GTP binding domain UNDYM_2994 PF08364 Bacterial translation initiation factor IF-2 associated region UNDYM_2994 PF11987 Translation-initiation factor 2 UNDYM_2995 PF13184 NusA-like KH domain UNDYM_2995 PF08529 NusA N-terminal domain UNDYM_2996 PF02576 RimP N-terminal domain UNDYM_2996 PF17384 RimP C-terminal SH3 domain UNDYM_2997 PF01479 S4 domain UNDYM_2997 PF00849 RNA pseudouridylate synthase UNDYM_2998 PF04079 Segregation and condensation complex subunit ScpB UNDYM_3001 PF00672 HAMP domain UNDYM_3001 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UNDYM_3001 PF02203 Tar ligand binding domain homologue UNDYM_3003 PF00909 Ammonium Transporter Family UNDYM_3004 PF03588 Leucyl/phenylalanyl-tRNA protein transferase UNDYM_3005 PF04376 Arginine-tRNA-protein transferase, N terminus UNDYM_3005 PF04377 Arginine-tRNA-protein transferase, C terminus UNDYM_3006 PF01180 Dihydroorotate dehydrogenase UNDYM_3007 PF00248 Aldo/keto reductase family UNDYM_3009 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD UNDYM_3010 PF05360 yiaA/B two helix domain UNDYM_3013 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase UNDYM_3014 PF01925 Sulfite exporter TauE/SafE UNDYM_3015 PF01077 Nitrite and sulphite reductase 4Fe-4S domain UNDYM_3015 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain UNDYM_3017 PF01507 Phosphoadenosine phosphosulfate reductase family UNDYM_3018 PF01507 Phosphoadenosine phosphosulfate reductase family UNDYM_3019 PF00009 Elongation factor Tu GTP binding domain UNDYM_3020 PF10414 Sirohaem synthase dimerisation region UNDYM_3020 PF14824 Sirohaem biosynthesis protein central UNDYM_3020 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases UNDYM_3024 PF03739 Lipopolysaccharide export system permease LptF/LptG UNDYM_3025 PF00883 Cytosol aminopeptidase family, catalytic domain UNDYM_3025 PF02789 Cytosol aminopeptidase family, N-terminal domain UNDYM_3027 PF03372 Endonuclease/Exonuclease/phosphatase family UNDYM_3028 PF00672 HAMP domain UNDYM_3028 PF02203 Tar ligand binding domain homologue UNDYM_3028 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UNDYM_3031 PF00664 ABC transporter transmembrane region UNDYM_3031 PF00005 ABC transporter UNDYM_3032 PF02875 Mur ligase family, glutamate ligase domain UNDYM_3032 PF08443 RimK-like ATP-grasp domain UNDYM_3032 PF08245 Mur ligase middle domain UNDYM_3034 PF08443 RimK-like ATP-grasp domain UNDYM_3034 PF08245 Mur ligase middle domain UNDYM_3034 PF02875 Mur ligase family, glutamate ligase domain UNDYM_3038 PF01965 DJ-1/PfpI family UNDYM_3039 PF00990 Diguanylate cyclase, GGDEF domain UNDYM_3042 PF00271 Helicase conserved C-terminal domain UNDYM_3042 PF17757 UvrB interaction domain UNDYM_3042 PF04851 Type III restriction enzyme, res subunit UNDYM_3042 PF02151 UvrB/uvrC motif UNDYM_3042 PF12344 Ultra-violet resistance protein B UNDYM_3043 PF00155 Aminotransferase class I and II UNDYM_3045 PF01292 Prokaryotic cytochrome b561 UNDYM_3047 PF18331 PKHD-type hydroxylase C-terminal domain UNDYM_3047 PF13640 2OG-Fe(II) oxygenase superfamily UNDYM_3048 PF01070 FMN-dependent dehydrogenase UNDYM_3049 PF07715 TonB-dependent Receptor Plug Domain UNDYM_3049 PF00593 TonB dependent receptor UNDYM_3050 PF00873 AcrB/AcrD/AcrF family UNDYM_3052 PF02321 Outer membrane efflux protein UNDYM_3053 PF00440 Bacterial regulatory proteins, tetR family UNDYM_3055 PF00672 HAMP domain UNDYM_3055 PF02203 Tar ligand binding domain homologue UNDYM_3055 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UNDYM_3057 PF00216 Bacterial DNA-binding protein UNDYM_3058 PF03147 Ferredoxin-fold anticodon binding domain UNDYM_3058 PF01588 Putative tRNA binding domain UNDYM_3058 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain UNDYM_3058 PF03483 B3/4 domain UNDYM_3058 PF03484 tRNA synthetase B5 domain UNDYM_3059 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain UNDYM_3059 PF01409 tRNA synthetases class II core domain (F) UNDYM_3060 PF00453 Ribosomal protein L20 UNDYM_3061 PF01632 Ribosomal protein L35 UNDYM_3062 PF00707 Translation initiation factor IF-3, C-terminal domain UNDYM_3062 PF05198 Translation initiation factor IF-3, N-terminal domain UNDYM_3063 PF02824 TGS domain UNDYM_3063 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) UNDYM_3063 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain UNDYM_3063 PF03129 Anticodon binding domain UNDYM_3064 PF01545 Cation efflux family UNDYM_3066 PF13291 ACT domain UNDYM_3066 PF04607 Region found in RelA / SpoT proteins UNDYM_3066 PF02824 TGS domain UNDYM_3067 PF01042 Endoribonuclease L-PSP UNDYM_3069 PF00106 short chain dehydrogenase UNDYM_3071 PF01144 Coenzyme A transferase UNDYM_3072 PF01144 Coenzyme A transferase UNDYM_3073 PF00196 Bacterial regulatory proteins, luxR family UNDYM_3073 PF00072 Response regulator receiver domain UNDYM_3078 PF00293 NUDIX domain UNDYM_3080 PF00361 Proton-conducting membrane transporter UNDYM_3081 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus UNDYM_3081 PF00361 Proton-conducting membrane transporter UNDYM_3082 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus UNDYM_3082 PF00361 Proton-conducting membrane transporter UNDYM_3083 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L UNDYM_3084 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 UNDYM_3085 PF12838 4Fe-4S dicluster domain UNDYM_3086 PF00146 NADH dehydrogenase UNDYM_3087 PF00384 Molybdopterin oxidoreductase UNDYM_3087 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region UNDYM_3087 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal UNDYM_3088 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region UNDYM_3088 PF10531 SLBB domain UNDYM_3088 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit UNDYM_3090 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit UNDYM_3091 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit UNDYM_3092 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit UNDYM_3093 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 UNDYM_3094 PF03840 Preprotein translocase SecG subunit UNDYM_3095 PF00121 Triosephosphate isomerase UNDYM_3096 PF08240 Alcohol dehydrogenase GroES-like domain UNDYM_3096 PF00107 Zinc-binding dehydrogenase UNDYM_3098 PF00013 KH domain UNDYM_3098 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain UNDYM_3098 PF01138 3' exoribonuclease family, domain 1 UNDYM_3098 PF03725 3' exoribonuclease family, domain 2 UNDYM_3098 PF00575 S1 RNA binding domain UNDYM_3099 PF00312 Ribosomal protein S15 UNDYM_3100 PF00682 HMGL-like UNDYM_3100 PF08502 LeuA allosteric (dimerisation) domain UNDYM_3101 PF01066 CDP-alcohol phosphatidyltransferase UNDYM_3102 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain UNDYM_3102 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain UNDYM_3103 PF10369 Small subunit of acetolactate synthase UNDYM_3104 PF00205 Thiamine pyrophosphate enzyme, central domain UNDYM_3104 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain UNDYM_3104 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain UNDYM_3105 PF08281 Sigma-70, region 4 UNDYM_3105 PF04542 Sigma-70 region 2 UNDYM_3109 PF08361 MAATS-type transcriptional repressor, C-terminal region UNDYM_3109 PF00440 Bacterial regulatory proteins, tetR family UNDYM_3110 PF03641 Possible lysine decarboxylase UNDYM_3113 PF02616 Segregation and condensation protein ScpA UNDYM_3114 PF02569 Pantoate-beta-alanine ligase UNDYM_3115 PF01497 Periplasmic binding protein UNDYM_3116 PF00892 EamA-like transporter family UNDYM_3119 PF02541 Ppx/GppA phosphatase family UNDYM_3122 PF00893 Small Multidrug Resistance protein UNDYM_3123 PF13525 Outer membrane lipoprotein UNDYM_3123 PF16331 TolA binding protein trimerisation UNDYM_3124 PF00691 OmpA family UNDYM_3125 PF07676 WD40-like Beta Propeller Repeat UNDYM_3125 PF04052 TolB amino-terminal domain UNDYM_3128 PF01292 Prokaryotic cytochrome b561 UNDYM_3137 PF00892 EamA-like transporter family UNDYM_3139 PF00075 RNase H UNDYM_3141 PF00753 Metallo-beta-lactamase superfamily UNDYM_3141 PF16123 Hydroxyacylglutathione hydrolase C-terminus UNDYM_3143 PF01132 Elongation factor P (EF-P) OB domain UNDYM_3143 PF08207 Elongation factor P (EF-P) KOW-like domain UNDYM_3143 PF09285 Elongation factor P, C-terminal UNDYM_3145 PF03180 NLPA lipoprotein UNDYM_3146 PF00528 Binding-protein-dependent transport system inner membrane component UNDYM_3147 PF00005 ABC transporter UNDYM_3147 PF09383 NIL domain UNDYM_3151 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle UNDYM_3156 PF00749 tRNA synthetases class I (E and Q), catalytic domain UNDYM_3157 PF00849 RNA pseudouridylate synthase UNDYM_3158 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region UNDYM_3158 PF01872 RibD C-terminal domain UNDYM_3159 PF10609 NUBPL iron-transfer P-loop NTPase UNDYM_3167 PF02837 Glycosyl hydrolases family 2, sugar binding domain UNDYM_3167 PF02836 Glycosyl hydrolases family 2, TIM barrel domain UNDYM_3167 PF00703 Glycosyl hydrolases family 2 UNDYM_3167 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 UNDYM_3167 PF16355 Domain of unknown function (DUF4982) UNDYM_3169 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 UNDYM_3169 PF02837 Glycosyl hydrolases family 2, sugar binding domain UNDYM_3169 PF00703 Glycosyl hydrolases family 2 UNDYM_3169 PF02836 Glycosyl hydrolases family 2, TIM barrel domain UNDYM_3169 PF16355 Domain of unknown function (DUF4982) UNDYM_3170 PF13378 Enolase C-terminal domain-like UNDYM_3170 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain UNDYM_3174 PF08264 Anticodon-binding domain of tRNA UNDYM_3174 PF09334 tRNA synthetases class I (M) UNDYM_3174 PF01588 Putative tRNA binding domain UNDYM_3176 PF00557 Metallopeptidase family M24 UNDYM_3176 PF01321 Creatinase/Prolidase N-terminal domain UNDYM_3177 PF00144 Beta-lactamase UNDYM_3178 PF11808 Phosphate regulon sensor protein PhoR UNDYM_3178 PF00512 His Kinase A (phospho-acceptor) domain UNDYM_3178 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UNDYM_3178 PF00989 PAS fold UNDYM_3179 PF00072 Response regulator receiver domain UNDYM_3179 PF00486 Transcriptional regulatory protein, C terminal UNDYM_3180 PF01895 PhoU domain UNDYM_3181 PF00005 ABC transporter UNDYM_3182 PF00528 Binding-protein-dependent transport system inner membrane component UNDYM_3183 PF00528 Binding-protein-dependent transport system inner membrane component UNDYM_3184 PF12849 PBP superfamily domain UNDYM_3185 PF02503 Polyphosphate kinase middle domain UNDYM_3185 PF13090 Polyphosphate kinase C-terminal domain 2 UNDYM_3185 PF17941 Polyphosphate kinase C-terminal domain 1 UNDYM_3185 PF13089 Polyphosphate kinase N-terminal domain UNDYM_3188 PF00892 EamA-like transporter family UNDYM_3192 PF12849 PBP superfamily domain UNDYM_3193 PF03306 Alpha-acetolactate decarboxylase UNDYM_3198 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase UNDYM_3198 PF00034 Cytochrome c UNDYM_3198 PF13442 Cytochrome C oxidase, cbb3-type, subunit III UNDYM_3201 PF00140 Sigma-70 factor, region 1.2 UNDYM_3201 PF04545 Sigma-70, region 4 UNDYM_3201 PF03979 Sigma-70 factor, region 1.1 UNDYM_3201 PF04546 Sigma-70, non-essential region UNDYM_3201 PF04542 Sigma-70 region 2 UNDYM_3201 PF04539 Sigma-70 region 3 UNDYM_3203 PF04973 Nicotinamide mononucleotide transporter UNDYM_3204 PF00114 Pilin (bacterial filament) UNDYM_3204 PF07963 Prokaryotic N-terminal methylation motif UNDYM_3205 PF07715 TonB-dependent Receptor Plug Domain UNDYM_3205 PF00593 TonB dependent receptor UNDYM_3210 PF00512 His Kinase A (phospho-acceptor) domain UNDYM_3210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UNDYM_3210 PF00672 HAMP domain UNDYM_3211 PF00486 Transcriptional regulatory protein, C terminal UNDYM_3211 PF00072 Response regulator receiver domain UNDYM_3223 PF01842 ACT domain UNDYM_3223 PF00696 Amino acid kinase family UNDYM_3223 PF13840 ACT domain UNDYM_3226 PF00230 Major intrinsic protein UNDYM_3227 PF01274 Malate synthase UNDYM_3229 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UNDYM_3229 PF03466 LysR substrate binding domain UNDYM_3230 PF02203 Tar ligand binding domain homologue UNDYM_3230 PF00672 HAMP domain UNDYM_3230 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UNDYM_3231 PF00313 'Cold-shock' DNA-binding domain UNDYM_3232 PF00378 Enoyl-CoA hydratase/isomerase UNDYM_3233 PF03061 Thioesterase superfamily UNDYM_3234 PF00108 Thiolase, N-terminal domain UNDYM_3234 PF02803 Thiolase, C-terminal domain UNDYM_3235 PF00378 Enoyl-CoA hydratase/isomerase UNDYM_3235 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain UNDYM_3235 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain UNDYM_3236 PF10996 Beta-Casp domain UNDYM_3236 PF00753 Metallo-beta-lactamase superfamily UNDYM_3236 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain UNDYM_3238 PF09587 Bacterial capsule synthesis protein PGA_cap UNDYM_3239 PF00175 Oxidoreductase NAD-binding domain UNDYM_3239 PF00111 2Fe-2S iron-sulfur cluster binding domain UNDYM_3239 PF00970 Oxidoreductase FAD-binding domain UNDYM_3244 PF03466 LysR substrate binding domain UNDYM_3244 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UNDYM_3245 PF01734 Patatin-like phospholipase UNDYM_3249 PF02203 Tar ligand binding domain homologue UNDYM_3249 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UNDYM_3249 PF00672 HAMP domain UNDYM_3253 PF13193 AMP-binding enzyme C-terminal domain UNDYM_3253 PF00501 AMP-binding enzyme UNDYM_3253 PF16177 Acetyl-coenzyme A synthetase N-terminus UNDYM_3254 PF04303 PrpF protein UNDYM_3255 PF00330 Aconitase family (aconitate hydratase) UNDYM_3255 PF00694 Aconitase C-terminal domain UNDYM_3257 PF00285 Citrate synthase, C-terminal domain UNDYM_3259 PF00158 Sigma-54 interaction domain UNDYM_3259 PF06506 Propionate catabolism activator UNDYM_3259 PF02954 Bacterial regulatory protein, Fis family UNDYM_3262 PF00563 EAL domain UNDYM_3262 PF00360 Phytochrome region UNDYM_3262 PF00990 Diguanylate cyclase, GGDEF domain UNDYM_3262 PF01590 GAF domain UNDYM_3264 PF00005 ABC transporter UNDYM_3265 PF00528 Binding-protein-dependent transport system inner membrane component UNDYM_3266 PF00528 Binding-protein-dependent transport system inner membrane component UNDYM_3267 PF03606 C4-dicarboxylate anaerobic carrier UNDYM_3269 PF01380 SIS domain UNDYM_3269 PF01418 Helix-turn-helix domain, rpiR family UNDYM_3270 PF00593 TonB dependent receptor UNDYM_3270 PF07715 TonB-dependent Receptor Plug Domain UNDYM_3271 PF03575 Peptidase family S51 UNDYM_3272 PF00672 HAMP domain UNDYM_3272 PF02203 Tar ligand binding domain homologue UNDYM_3272 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UNDYM_3277 PF03707 Bacterial signalling protein N terminal repeat UNDYM_3277 PF00563 EAL domain UNDYM_3277 PF00990 Diguanylate cyclase, GGDEF domain UNDYM_3279 PF02347 Glycine cleavage system P-protein UNDYM_3280 PF01597 Glycine cleavage H-protein UNDYM_3281 PF01571 Aminomethyltransferase folate-binding domain UNDYM_3281 PF08669 Glycine cleavage T-protein C-terminal barrel domain UNDYM_3283 PF00544 Pectate lyase UNDYM_3284 PF01804 Penicillin amidase UNDYM_3285 PF00005 ABC transporter UNDYM_3285 PF00664 ABC transporter transmembrane region UNDYM_3287 PF08361 MAATS-type transcriptional repressor, C-terminal region UNDYM_3287 PF00440 Bacterial regulatory proteins, tetR family UNDYM_3289 PF07969 Amidohydrolase family UNDYM_3290 PF01464 Transglycosylase SLT domain UNDYM_3291 PF00107 Zinc-binding dehydrogenase UNDYM_3291 PF08240 Alcohol dehydrogenase GroES-like domain UNDYM_3292 PF00106 short chain dehydrogenase UNDYM_3294 PF03922 OmpW family UNDYM_3296 PF00873 AcrB/AcrD/AcrF family UNDYM_3297 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion UNDYM_3301 PF05114 Protein of unknown function (DUF692) UNDYM_3305 PF01814 Hemerythrin HHE cation binding domain UNDYM_3307 PF03205 Molybdopterin guanine dinucleotide synthesis protein B UNDYM_3317 PF00311 Phosphoenolpyruvate carboxylase UNDYM_3318 PF00342 Phosphoglucose isomerase UNDYM_3319 PF01081 KDPG and KHG aldolase UNDYM_3320 PF00920 Dehydratase family UNDYM_3321 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain UNDYM_3321 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain UNDYM_3322 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase UNDYM_3323 PF01380 SIS domain UNDYM_3323 PF01418 Helix-turn-helix domain, rpiR family UNDYM_3325 PF00593 TonB dependent receptor UNDYM_3325 PF07715 TonB-dependent Receptor Plug Domain UNDYM_3328 PF00925 GTP cyclohydrolase II UNDYM_3329 PF00920 Dehydratase family UNDYM_3330 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain UNDYM_3331 PF11940 Domain of unknown function (DUF3458) Ig-like fold UNDYM_3331 PF17432 Domain of unknown function (DUF3458_C) ARM repeats UNDYM_3331 PF01433 Peptidase family M1 domain UNDYM_3335 PF08240 Alcohol dehydrogenase GroES-like domain UNDYM_3335 PF00107 Zinc-binding dehydrogenase UNDYM_3336 PF00892 EamA-like transporter family UNDYM_3337 PF05872 Bacterial protein of unknown function (DUF853) UNDYM_3338 PF01709 Transcriptional regulator UNDYM_3339 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain UNDYM_3339 PF02844 Phosphoribosylglycinamide synthetase, N domain UNDYM_3339 PF02843 Phosphoribosylglycinamide synthetase, C domain UNDYM_3340 PF01218 Coproporphyrinogen III oxidase UNDYM_3341 PF01467 Cytidylyltransferase-like UNDYM_3343 PF02590 Predicted SPOUT methyltransferase UNDYM_3344 PF02545 Maf-like protein UNDYM_3345 PF10150 Ribonuclease E/G family UNDYM_3345 PF00575 S1 RNA binding domain UNDYM_3348 PF00871 Acetokinase family UNDYM_3349 PF01515 Phosphate acetyl/butaryl transferase UNDYM_3352 PF00005 ABC transporter UNDYM_3353 PF00005 ABC transporter UNDYM_3354 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion UNDYM_3356 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus UNDYM_3356 PF00561 alpha/beta hydrolase fold UNDYM_3358 PF00563 EAL domain UNDYM_3358 PF00990 Diguanylate cyclase, GGDEF domain UNDYM_3358 PF05231 MASE1 UNDYM_3358 PF08447 PAS fold UNDYM_3358 PF08448 PAS fold UNDYM_3358 PF13426 PAS domain UNDYM_3360 PF01075 Glycosyltransferase family 9 (heptosyltransferase) UNDYM_3362 PF00664 ABC transporter transmembrane region UNDYM_3362 PF00005 ABC transporter UNDYM_3364 PF01336 OB-fold nucleic acid binding domain UNDYM_3364 PF02811 PHP domain UNDYM_3364 PF14579 Helix-hairpin-helix motif UNDYM_3364 PF17657 Bacterial DNA polymerase III alpha subunit finger domain UNDYM_3364 PF07733 Bacterial DNA polymerase III alpha NTPase domain UNDYM_3365 PF00593 TonB dependent receptor UNDYM_3365 PF07715 TonB-dependent Receptor Plug Domain UNDYM_3367 PF00990 Diguanylate cyclase, GGDEF domain UNDYM_3367 PF08448 PAS fold UNDYM_3368 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain UNDYM_3368 PF00749 tRNA synthetases class I (E and Q), catalytic domain UNDYM_3372 PF00144 Beta-lactamase UNDYM_3373 PF03466 LysR substrate binding domain UNDYM_3373 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UNDYM_3374 PF07286 Protein of unknown function (DUF1445) UNDYM_3376 PF00011 Hsp20/alpha crystallin family UNDYM_3377 PF03692 Putative zinc- or iron-chelating domain UNDYM_3384 PF01878 EVE domain UNDYM_3388 PF07992 Pyridine nucleotide-disulphide oxidoreductase UNDYM_3389 PF02683 Cytochrome C biogenesis protein transmembrane region UNDYM_3389 PF11412 Disulphide bond corrector protein DsbC UNDYM_3392 PF00578 AhpC/TSA family UNDYM_3394 PF08281 Sigma-70, region 4 UNDYM_3394 PF04542 Sigma-70 region 2 UNDYM_3396 PF00082 Subtilase family UNDYM_3399 PF12833 Helix-turn-helix domain UNDYM_3399 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term UNDYM_3400 PF00109 Beta-ketoacyl synthase, N-terminal domain UNDYM_3400 PF02801 Beta-ketoacyl synthase, C-terminal domain UNDYM_3402 PF13302 Acetyltransferase (GNAT) domain UNDYM_3412 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UNDYM_3412 PF13492 GAF domain UNDYM_3412 PF06580 Histidine kinase UNDYM_3412 PF07694 5TMR of 5TMR-LYT UNDYM_3413 PF00072 Response regulator receiver domain UNDYM_3413 PF04397 LytTr DNA-binding domain UNDYM_3417 PF02203 Tar ligand binding domain homologue UNDYM_3417 PF00672 HAMP domain UNDYM_3417 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UNDYM_3418 PF00005 ABC transporter UNDYM_3419 PF12399 Branched-chain amino acid ATP-binding cassette transporter UNDYM_3419 PF00005 ABC transporter UNDYM_3420 PF02653 Branched-chain amino acid transport system / permease component UNDYM_3421 PF02653 Branched-chain amino acid transport system / permease component UNDYM_3422 PF13458 Periplasmic binding protein UNDYM_3423 PF03480 Bacterial extracellular solute-binding protein, family 7 UNDYM_3424 PF05378 Hydantoinase/oxoprolinase N-terminal region UNDYM_3424 PF01968 Hydantoinase/oxoprolinase UNDYM_3425 PF13609 Gram-negative porin UNDYM_3427 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family UNDYM_3428 PF01047 MarR family UNDYM_3429 PF02566 OsmC-like protein UNDYM_3432 PF02630 SCO1/SenC UNDYM_3435 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) UNDYM_3435 PF06594 Haemolysin-type calcium binding protein related domain UNDYM_3440 PF03412 Peptidase C39 family UNDYM_3440 PF00005 ABC transporter UNDYM_3440 PF00664 ABC transporter transmembrane region UNDYM_3448 PF03186 CobD/Cbib protein UNDYM_3448 PF17113 Regulatory signalling modulator protein AmpE UNDYM_3449 PF00293 NUDIX domain UNDYM_3450 PF01245 Ribosomal protein L19 UNDYM_3451 PF01746 tRNA (Guanine-1)-methyltransferase UNDYM_3452 PF05239 PRC-barrel domain UNDYM_3452 PF01782 RimM N-terminal domain UNDYM_3453 PF00886 Ribosomal protein S16 UNDYM_3457 PF12806 Acetyl-CoA dehydrogenase C-terminal like UNDYM_3457 PF02770 Acyl-CoA dehydrogenase, middle domain UNDYM_3457 PF00441 Acyl-CoA dehydrogenase, C-terminal domain UNDYM_3457 PF02771 Acyl-CoA dehydrogenase, N-terminal domain UNDYM_3458 PF01012 Electron transfer flavoprotein domain UNDYM_3458 PF00766 Electron transfer flavoprotein FAD-binding domain UNDYM_3459 PF01012 Electron transfer flavoprotein domain UNDYM_3460 PF01206 Sulfurtransferase TusA UNDYM_3462 PF00583 Acetyltransferase (GNAT) family UNDYM_3463 PF02272 DHHA1 domain UNDYM_3463 PF01411 tRNA synthetases class II (A) UNDYM_3463 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain UNDYM_3468 PF00005 ABC transporter UNDYM_3469 PF07739 TipAS antibiotic-recognition domain UNDYM_3469 PF13411 MerR HTH family regulatory protein UNDYM_3470 PF03009 Glycerophosphoryl diester phosphodiesterase family UNDYM_3471 PF02515 CoA-transferase family III UNDYM_3472 PF02515 CoA-transferase family III UNDYM_3473 PF06580 Histidine kinase UNDYM_3473 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UNDYM_3473 PF07694 5TMR of 5TMR-LYT UNDYM_3474 PF04397 LytTr DNA-binding domain UNDYM_3474 PF00072 Response regulator receiver domain UNDYM_3475 PF13673 Acetyltransferase (GNAT) domain UNDYM_3477 PF01431 Peptidase family M13 UNDYM_3477 PF05649 Peptidase family M13 UNDYM_3480 PF00501 AMP-binding enzyme UNDYM_3480 PF13193 AMP-binding enzyme C-terminal domain UNDYM_3481 PF01230 HIT domain UNDYM_3482 PF00501 AMP-binding enzyme UNDYM_3482 PF00668 Condensation domain UNDYM_3482 PF00975 Thioesterase domain UNDYM_3482 PF00550 Phosphopantetheine attachment site UNDYM_3482 PF13193 AMP-binding enzyme C-terminal domain UNDYM_3486 PF08281 Sigma-70, region 4 UNDYM_3486 PF04542 Sigma-70 region 2 UNDYM_3488 PF06983 3-demethylubiquinone-9 3-methyltransferase UNDYM_3489 PF03795 YCII-related domain UNDYM_3493 PF03358 NADPH-dependent FMN reductase UNDYM_3494 PF02678 Pirin UNDYM_3494 PF17954 Quercetinase C-terminal cupin domain UNDYM_3495 PF03466 LysR substrate binding domain UNDYM_3495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UNDYM_3496 PF00749 tRNA synthetases class I (E and Q), catalytic domain UNDYM_3497 PF00749 tRNA synthetases class I (E and Q), catalytic domain UNDYM_3500 PF09286 Pro-kumamolisin, activation domain UNDYM_3500 PF00082 Subtilase family UNDYM_3501 PF07731 Multicopper oxidase UNDYM_3501 PF07732 Multicopper oxidase UNDYM_3504 PF01810 LysE type translocator UNDYM_3506 PF00563 EAL domain UNDYM_3506 PF01590 GAF domain UNDYM_3506 PF00990 Diguanylate cyclase, GGDEF domain UNDYM_3506 PF00360 Phytochrome region UNDYM_3508 PF01467 Cytidylyltransferase-like UNDYM_3509 PF01121 Dephospho-CoA kinase UNDYM_3510 PF00512 His Kinase A (phospho-acceptor) domain UNDYM_3510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UNDYM_3510 PF00672 HAMP domain UNDYM_3511 PF00486 Transcriptional regulatory protein, C terminal UNDYM_3511 PF00072 Response regulator receiver domain UNDYM_3514 PF00166 Chaperonin 10 Kd subunit UNDYM_3515 PF00118 TCP-1/cpn60 chaperonin family UNDYM_3521 PF03466 LysR substrate binding domain UNDYM_3521 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UNDYM_3524 PF00109 Beta-ketoacyl synthase, N-terminal domain UNDYM_3524 PF02801 Beta-ketoacyl synthase, C-terminal domain UNDYM_3524 PF08240 Alcohol dehydrogenase GroES-like domain UNDYM_3524 PF00698 Acyl transferase domain UNDYM_3524 PF08659 KR domain UNDYM_3524 PF00550 Phosphopantetheine attachment site UNDYM_3524 PF08990 Erythronolide synthase docking UNDYM_3524 PF16197 Ketoacyl-synthetase C-terminal extension UNDYM_3524 PF14765 Polyketide synthase dehydratase UNDYM_3527 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UNDYM_3527 PF03466 LysR substrate binding domain UNDYM_3530 PF04055 Radical SAM superfamily UNDYM_3530 PF13186 Iron-sulfur cluster-binding domain UNDYM_3535 PF01694 Rhomboid family UNDYM_3535 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease UNDYM_3539 PF05544 Proline racemase UNDYM_3541 PF01965 DJ-1/PfpI family UNDYM_3541 PF12833 Helix-turn-helix domain UNDYM_3542 PF07729 FCD domain UNDYM_3542 PF00392 Bacterial regulatory proteins, gntR family UNDYM_3545 PF00378 Enoyl-CoA hydratase/isomerase UNDYM_3547 PF01926 50S ribosome-binding GTPase UNDYM_3560 PF00850 Histone deacetylase domain UNDYM_3561 PF07726 ATPase family associated with various cellular activities (AAA) UNDYM_3561 PF17863 AAA lid domain UNDYM_3564 PF01841 Transglutaminase-like superfamily UNDYM_3564 PF11992 Domain of unknown function (DUF3488) UNDYM_3564 PF13559 Domain of unknown function (DUF4129) UNDYM_3565 PF13406 Transglycosylase SLT domain UNDYM_3567 PF00291 Pyridoxal-phosphate dependent enzyme UNDYM_3569 PF03466 LysR substrate binding domain UNDYM_3569 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UNDYM_3570 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase UNDYM_3571 PF00294 pfkB family carbohydrate kinase UNDYM_3572 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain UNDYM_3572 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain UNDYM_3572 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain UNDYM_3573 PF18073 Rubredoxin metal binding domain UNDYM_3575 PF00216 Bacterial DNA-binding protein UNDYM_3576 PF00575 S1 RNA binding domain UNDYM_3577 PF02224 Cytidylate kinase UNDYM_3578 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) UNDYM_3579 PF02153 Prephenate dehydrogenase UNDYM_3579 PF01842 ACT domain UNDYM_3580 PF01817 Chorismate mutase type II UNDYM_3580 PF00800 Prephenate dehydratase UNDYM_3580 PF01842 ACT domain UNDYM_3581 PF00266 Aminotransferase class-V UNDYM_3582 PF00521 DNA gyrase/topoisomerase IV, subunit A UNDYM_3582 PF03989 DNA gyrase C-terminal domain, beta-propeller UNDYM_3583 PF01389 OmpA-like transmembrane domain UNDYM_3583 PF00691 OmpA family UNDYM_3584 PF00691 OmpA family UNDYM_3586 PF13419 Haloacid dehalogenase-like hydrolase UNDYM_3594 PF00356 Bacterial regulatory proteins, lacI family UNDYM_3594 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family UNDYM_3596 PF13419 Haloacid dehalogenase-like hydrolase UNDYM_3597 PF03632 Glycosyl hydrolase family 65 central catalytic domain UNDYM_3597 PF03636 Glycosyl hydrolase family 65, N-terminal domain UNDYM_3597 PF03633 Glycosyl hydrolase family 65, C-terminal domain UNDYM_3598 PF06276 Ferric iron reductase FhuF-like transporter UNDYM_3598 PF04183 IucA / IucC family UNDYM_3600 PF04183 IucA / IucC family UNDYM_3600 PF06276 Ferric iron reductase FhuF-like transporter UNDYM_3601 PF07715 TonB-dependent Receptor Plug Domain UNDYM_3601 PF00593 TonB dependent receptor UNDYM_3603 PF00356 Bacterial regulatory proteins, lacI family UNDYM_3606 PF00975 Thioesterase domain UNDYM_3607 PF01648 4'-phosphopantetheinyl transferase superfamily UNDYM_3609 PF01740 STAS domain UNDYM_3610 PF00664 ABC transporter transmembrane region UNDYM_3610 PF00005 ABC transporter UNDYM_3611 PF00550 Phosphopantetheine attachment site UNDYM_3612 PF00501 AMP-binding enzyme UNDYM_3613 PF00296 Luciferase-like monooxygenase UNDYM_3617 PF07993 Male sterility protein UNDYM_3617 PF00501 AMP-binding enzyme UNDYM_3617 PF00550 Phosphopantetheine attachment site UNDYM_3617 PF00668 Condensation domain UNDYM_3617 PF13193 AMP-binding enzyme C-terminal domain UNDYM_3618 PF00668 Condensation domain UNDYM_3618 PF00975 Thioesterase domain UNDYM_3618 PF00501 AMP-binding enzyme UNDYM_3618 PF13193 AMP-binding enzyme C-terminal domain UNDYM_3618 PF00550 Phosphopantetheine attachment site UNDYM_3620 PF00668 Condensation domain UNDYM_3620 PF02801 Beta-ketoacyl synthase, C-terminal domain UNDYM_3620 PF00202 Aminotransferase class-III UNDYM_3620 PF00501 AMP-binding enzyme UNDYM_3620 PF13193 AMP-binding enzyme C-terminal domain UNDYM_3620 PF00550 Phosphopantetheine attachment site UNDYM_3620 PF16197 Ketoacyl-synthetase C-terminal extension UNDYM_3620 PF00109 Beta-ketoacyl synthase, N-terminal domain UNDYM_3623 PF13581 Histidine kinase-like ATPase domain UNDYM_3624 PF00672 HAMP domain UNDYM_3624 PF07228 Stage II sporulation protein E (SpoIIE) UNDYM_3625 PF00497 Bacterial extracellular solute-binding proteins, family 3 UNDYM_3629 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase UNDYM_3630 PF00111 2Fe-2S iron-sulfur cluster binding domain UNDYM_3630 PF01799 [2Fe-2S] binding domain UNDYM_3632 PF03466 LysR substrate binding domain UNDYM_3632 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UNDYM_3635 PF03466 LysR substrate binding domain UNDYM_3635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UNDYM_3636 PF14864 Alkyl sulfatase C-terminal UNDYM_3636 PF14863 Alkyl sulfatase dimerisation UNDYM_3636 PF00753 Metallo-beta-lactamase superfamily UNDYM_3637 PF00313 'Cold-shock' DNA-binding domain UNDYM_3638 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) UNDYM_3643 PF00375 Sodium:dicarboxylate symporter family UNDYM_3644 PF01546 Peptidase family M20/M25/M40 UNDYM_3644 PF07687 Peptidase dimerisation domain UNDYM_3645 PF01546 Peptidase family M20/M25/M40 UNDYM_3645 PF07687 Peptidase dimerisation domain UNDYM_3648 PF01790 Prolipoprotein diacylglyceryl transferase UNDYM_3650 PF07690 Major Facilitator Superfamily UNDYM_3651 PF01136 Peptidase family U32 UNDYM_3651 PF12392 Collagenase UNDYM_3652 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family UNDYM_3660 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain UNDYM_3660 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain UNDYM_3662 PF02203 Tar ligand binding domain homologue UNDYM_3662 PF00672 HAMP domain UNDYM_3662 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UNDYM_3665 PF02673 Bacitracin resistance protein BacA UNDYM_3666 PF16124 RecQ zinc-binding UNDYM_3666 PF00570 HRDC domain UNDYM_3666 PF00271 Helicase conserved C-terminal domain UNDYM_3666 PF00270 DEAD/DEAH box helicase UNDYM_3666 PF09382 RQC domain UNDYM_3673 PF08279 HTH domain UNDYM_3673 PF13280 WYL domain UNDYM_3674 PF00356 Bacterial regulatory proteins, lacI family UNDYM_3676 PF00128 Alpha amylase, catalytic domain UNDYM_3679 PF02872 5'-nucleotidase, C-terminal domain UNDYM_3679 PF00149 Calcineurin-like phosphoesterase UNDYM_3684 PF00034 Cytochrome c UNDYM_3685 PF00174 Oxidoreductase molybdopterin binding domain UNDYM_3688 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UNDYM_3688 PF03466 LysR substrate binding domain UNDYM_3693 PF08818 Domain of unknown function (DU1801) UNDYM_3701 PF07992 Pyridine nucleotide-disulphide oxidoreductase UNDYM_3706 PF00893 Small Multidrug Resistance protein UNDYM_3712 PF00005 ABC transporter UNDYM_3715 PF07739 TipAS antibiotic-recognition domain UNDYM_3715 PF13411 MerR HTH family regulatory protein UNDYM_3717 PF12419 SNF2 Helicase protein UNDYM_3717 PF00271 Helicase conserved C-terminal domain UNDYM_3717 PF00176 SNF2 family N-terminal domain UNDYM_3718 PF03707 Bacterial signalling protein N terminal repeat UNDYM_3718 PF00990 Diguanylate cyclase, GGDEF domain UNDYM_3718 PF00563 EAL domain UNDYM_3719 PF02390 Putative methyltransferase UNDYM_3743 PF04466 Phage terminase large subunit UNDYM_3743 PF17288 Terminase RNAseH like domain UNDYM_3746 PF00672 HAMP domain UNDYM_3746 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UNDYM_3746 PF13426 PAS domain UNDYM_3746 PF00512 His Kinase A (phospho-acceptor) domain UNDYM_3748 PF01494 FAD binding domain UNDYM_3749 PF00593 TonB dependent receptor UNDYM_3749 PF07715 TonB-dependent Receptor Plug Domain UNDYM_3750 PF05171 Haemin-degrading HemS.ChuX domain UNDYM_3751 PF01497 Periplasmic binding protein UNDYM_3752 PF01032 FecCD transport family UNDYM_3753 PF00005 ABC transporter UNDYM_3758 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UNDYM_3758 PF03466 LysR substrate binding domain UNDYM_3759 PF01717 Cobalamin-independent synthase, Catalytic domain UNDYM_3759 PF08267 Cobalamin-independent synthase, N-terminal domain UNDYM_3761 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region UNDYM_3761 PF10531 SLBB domain UNDYM_3761 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit UNDYM_3763 PF04879 Molybdopterin oxidoreductase Fe4S4 domain UNDYM_3763 PF00384 Molybdopterin oxidoreductase UNDYM_3763 PF01568 Molydopterin dinucleotide binding domain UNDYM_3767 PF00171 Aldehyde dehydrogenase family UNDYM_3768 PF02770 Acyl-CoA dehydrogenase, middle domain UNDYM_3768 PF00441 Acyl-CoA dehydrogenase, C-terminal domain UNDYM_3768 PF02771 Acyl-CoA dehydrogenase, N-terminal domain UNDYM_3769 PF00378 Enoyl-CoA hydratase/isomerase UNDYM_3770 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain UNDYM_3770 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain UNDYM_3770 PF00378 Enoyl-CoA hydratase/isomerase UNDYM_3771 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase UNDYM_3771 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase UNDYM_3772 PF08448 PAS fold UNDYM_3772 PF13426 PAS domain UNDYM_3772 PF08447 PAS fold UNDYM_3772 PF05231 MASE1 UNDYM_3772 PF00563 EAL domain UNDYM_3772 PF00990 Diguanylate cyclase, GGDEF domain UNDYM_3783 PF02417 Chromate transporter UNDYM_3784 PF02417 Chromate transporter UNDYM_3785 PF09828 Chromate resistance exported protein UNDYM_3786 PF03466 LysR substrate binding domain UNDYM_3786 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UNDYM_3787 PF01042 Endoribonuclease L-PSP UNDYM_3788 PF07992 Pyridine nucleotide-disulphide oxidoreductase UNDYM_3788 PF00724 NADH:flavin oxidoreductase / NADH oxidase family UNDYM_3791 PF00672 HAMP domain UNDYM_3791 PF02203 Tar ligand binding domain homologue UNDYM_3791 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UNDYM_3792 PF01661 Macro domain UNDYM_3795 PF12697 Alpha/beta hydrolase family UNDYM_3796 PF00672 HAMP domain UNDYM_3796 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UNDYM_3796 PF02203 Tar ligand binding domain homologue UNDYM_3800 PF00132 Bacterial transferase hexapeptide (six repeats) UNDYM_3802 PF01584 CheW-like domain UNDYM_3803 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UNDYM_3803 PF00672 HAMP domain UNDYM_3803 PF02203 Tar ligand binding domain homologue UNDYM_3804 PF02203 Tar ligand binding domain homologue UNDYM_3804 PF00672 HAMP domain UNDYM_3804 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UNDYM_3805 PF01979 Amidohydrolase family UNDYM_3809 PF00795 Carbon-nitrogen hydrolase UNDYM_3810 PF00571 CBS domain UNDYM_3810 PF03471 Transporter associated domain UNDYM_3817 PF17655 Inward rectifier potassium channel C-terminal domain UNDYM_3817 PF07885 Ion channel UNDYM_3818 PF02130 Uncharacterized protein family UPF0054 UNDYM_3819 PF02562 PhoH-like protein UNDYM_3820 PF04055 Radical SAM superfamily UNDYM_3820 PF01938 TRAM domain UNDYM_3820 PF00919 Uncharacterized protein family UPF0004 UNDYM_3822 PF01613 Flavin reductase like domain UNDYM_3828 PF12833 Helix-turn-helix domain UNDYM_3829 PF01411 tRNA synthetases class II (A) UNDYM_3829 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain UNDYM_3829 PF02272 DHHA1 domain UNDYM_3837 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UNDYM_3837 PF03466 LysR substrate binding domain UNDYM_3838 PF07690 Major Facilitator Superfamily UNDYM_3847 PF06470 SMC proteins Flexible Hinge Domain UNDYM_3847 PF02463 RecF/RecN/SMC N terminal domain UNDYM_3848 PF05016 ParE toxin of type II toxin-antitoxin system, parDE UNDYM_3851 PF16338 Domain of unknown function (DUF4968) UNDYM_3851 PF01055 Glycosyl hydrolases family 31 UNDYM_3851 PF17137 Domain of unknown function (DUF5110) UNDYM_3851 PF13802 Galactose mutarotase-like UNDYM_3861 PF03481 Putative GTP-binding controlling metal-binding UNDYM_3861 PF01300 Telomere recombination UNDYM_3862 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain UNDYM_3862 PF02222 ATP-grasp domain UNDYM_3863 PF00731 AIR carboxylase UNDYM_3864 PF01259 SAICAR synthetase UNDYM_3865 PF01116 Fructose-bisphosphate aldolase class-II UNDYM_3866 PF02887 Pyruvate kinase, alpha/beta domain UNDYM_3866 PF00224 Pyruvate kinase, barrel domain UNDYM_3867 PF00162 Phosphoglycerate kinase UNDYM_3873 PF00561 alpha/beta hydrolase fold UNDYM_3881 PF01734 Patatin-like phospholipase UNDYM_3890 PF01435 Peptidase family M48 UNDYM_3891 PF01967 MoaC family UNDYM_3894 PF12833 Helix-turn-helix domain UNDYM_3894 PF12852 Cupin UNDYM_3896 PF00722 Glycosyl hydrolases family 16 UNDYM_3905 PF15864 Protein glycosylation ligase UNDYM_3905 PF04932 O-Antigen ligase UNDYM_3905 PF11846 Virulence factor membrane-bound polymerase, C-terminal UNDYM_3910 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) UNDYM_3910 PF08548 Peptidase M10 serralysin C terminal UNDYM_3918 PF02321 Outer membrane efflux protein UNDYM_3919 PF00440 Bacterial regulatory proteins, tetR family UNDYM_3920 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion UNDYM_3921 PF00873 AcrB/AcrD/AcrF family UNDYM_3923 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) UNDYM_3924 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) UNDYM_3928 PF12146 Serine aminopeptidase, S33 UNDYM_3931 PF18029 Glyoxalase-like domain UNDYM_3932 PF05736 OprF membrane domain UNDYM_3932 PF00691 OmpA family UNDYM_3935 PF02417 Chromate transporter UNDYM_3936 PF02417 Chromate transporter UNDYM_3937 PF03466 LysR substrate binding domain UNDYM_3937 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UNDYM_3942 PF09278 MerR, DNA binding UNDYM_3942 PF00376 MerR family regulatory protein UNDYM_3944 PF13460 NAD(P)H-binding UNDYM_3946 PF07690 Major Facilitator Superfamily UNDYM_3948 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UNDYM_3948 PF03466 LysR substrate binding domain UNDYM_3949 PF00230 Major intrinsic protein UNDYM_3950 PF01451 Low molecular weight phosphotyrosine protein phosphatase UNDYM_3952 PF01022 Bacterial regulatory protein, arsR family UNDYM_3953 PF07992 Pyridine nucleotide-disulphide oxidoreductase UNDYM_3977 PF14552 Tautomerase enzyme UNDYM_3979 PF03466 LysR substrate binding domain UNDYM_3979 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UNDYM_3988 PF04073 Aminoacyl-tRNA editing domain UNDYM_3990 PF01596 O-methyltransferase UNDYM_3993 PF00388 Phosphatidylinositol-specific phospholipase C, X domain UNDYM_3995 PF12697 Alpha/beta hydrolase family UNDYM_3997 PF03232 Ubiquinone biosynthesis protein COQ7 UNDYM_4000 PF13302 Acetyltransferase (GNAT) domain UNDYM_4004 PF00571 CBS domain UNDYM_4004 PF00005 ABC transporter UNDYM_4006 PF01636 Phosphotransferase enzyme family UNDYM_4007 PF00144 Beta-lactamase UNDYM_4011 PF04545 Sigma-70, region 4 UNDYM_4011 PF04542 Sigma-70 region 2 UNDYM_4013 PF13520 Amino acid permease UNDYM_4014 PF06751 Ethanolamine ammonia lyase large subunit (EutB) UNDYM_4015 PF05985 Ethanolamine ammonia-lyase light chain (EutC) UNDYM_4022 PF03193 RsgA GTPase UNDYM_4027 PF01292 Prokaryotic cytochrome b561 UNDYM_4033 PF01569 PAP2 superfamily UNDYM_4038 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family UNDYM_4052 PF00557 Metallopeptidase family M24 UNDYM_4054 PF00072 Response regulator receiver domain UNDYM_4055 PF00563 EAL domain UNDYM_4055 PF00990 Diguanylate cyclase, GGDEF domain UNDYM_4055 PF03707 Bacterial signalling protein N terminal repeat UNDYM_4056 PF08446 PAS fold UNDYM_4056 PF00512 His Kinase A (phospho-acceptor) domain UNDYM_4056 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UNDYM_4056 PF01590 GAF domain UNDYM_4056 PF00360 Phytochrome region UNDYM_4057 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UNDYM_4057 PF00512 His Kinase A (phospho-acceptor) domain UNDYM_4057 PF00989 PAS fold UNDYM_4058 PF05922 Peptidase inhibitor I9 UNDYM_4058 PF00082 Subtilase family UNDYM_4065 PF03707 Bacterial signalling protein N terminal repeat UNDYM_4065 PF00990 Diguanylate cyclase, GGDEF domain UNDYM_4065 PF00563 EAL domain UNDYM_4066 PF13180 PDZ domain UNDYM_4066 PF03572 Peptidase family S41 UNDYM_4067 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UNDYM_4067 PF08447 PAS fold UNDYM_4068 PF00679 Elongation factor G C-terminus UNDYM_4068 PF14492 Elongation Factor G, domain II UNDYM_4068 PF03764 Elongation factor G, domain IV UNDYM_4068 PF00009 Elongation factor Tu GTP binding domain UNDYM_4068 PF03144 Elongation factor Tu domain 2 UNDYM_4071 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle UNDYM_4071 PF12793 Sugar transport-related sRNA regulator N-term UNDYM_4079 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UNDYM_4079 PF03466 LysR substrate binding domain UNDYM_4080 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain UNDYM_4080 PF10996 Beta-Casp domain UNDYM_4080 PF00753 Metallo-beta-lactamase superfamily UNDYM_4081 PF10503 Esterase PHB depolymerase UNDYM_4088 PF06719 AraC-type transcriptional regulator N-terminus UNDYM_4088 PF12833 Helix-turn-helix domain UNDYM_4089 PF00111 2Fe-2S iron-sulfur cluster binding domain UNDYM_4089 PF01799 [2Fe-2S] binding domain UNDYM_4090 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase UNDYM_4091 PF13478 XdhC Rossmann domain UNDYM_4091 PF02625 XdhC and CoxI family UNDYM_4093 PF00264 Common central domain of tyrosinase UNDYM_4095 PF09905 DNA-binding protein VF530 UNDYM_4111 PF01797 Transposase IS200 like UNDYM_4118 PF00916 Sulfate permease family UNDYM_4118 PF01740 STAS domain UNDYM_4125 PF00672 HAMP domain UNDYM_4125 PF00072 Response regulator receiver domain UNDYM_4125 PF01627 Hpt domain UNDYM_4125 PF00512 His Kinase A (phospho-acceptor) domain UNDYM_4125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UNDYM_4125 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) UNDYM_4126 PF00072 Response regulator receiver domain UNDYM_4126 PF00990 Diguanylate cyclase, GGDEF domain UNDYM_4131 PF13458 Periplasmic binding protein UNDYM_4132 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UNDYM_4132 PF03466 LysR substrate binding domain UNDYM_4135 PF01546 Peptidase family M20/M25/M40 UNDYM_4135 PF07687 Peptidase dimerisation domain UNDYM_4136 PF01546 Peptidase family M20/M25/M40 UNDYM_4136 PF07687 Peptidase dimerisation domain UNDYM_4137 PF00291 Pyridoxal-phosphate dependent enzyme UNDYM_4138 PF01037 Lrp/AsnC ligand binding domain UNDYM_4139 PF07722 Peptidase C26 UNDYM_4140 PF01266 FAD dependent oxidoreductase UNDYM_4141 PF02423 Ornithine cyclodeaminase/mu-crystallin family UNDYM_4142 PF02163 Peptidase family M50 UNDYM_4142 PF17820 PDZ domain UNDYM_4143 PF01810 LysE type translocator UNDYM_4148 PF00005 ABC transporter UNDYM_4150 PF01678 Diaminopimelate epimerase UNDYM_4151 PF00107 Zinc-binding dehydrogenase UNDYM_4151 PF08240 Alcohol dehydrogenase GroES-like domain UNDYM_4153 PF00152 tRNA synthetases class II (D, K and N) UNDYM_4153 PF01336 OB-fold nucleic acid binding domain UNDYM_4154 PF00144 Beta-lactamase UNDYM_4156 PF17151 Periplasmic sensor domain UNDYM_4156 PF00990 Diguanylate cyclase, GGDEF domain UNDYM_4166 PF00082 Subtilase family UNDYM_4166 PF09286 Pro-kumamolisin, activation domain UNDYM_4170 PF04403 Paraquat-inducible protein A UNDYM_4171 PF04403 Paraquat-inducible protein A UNDYM_4172 PF02470 MlaD protein UNDYM_4196 PF07484 Phage Tail Collar Domain UNDYM_4212 PF00436 Single-strand binding protein family UNDYM_4227 PF03466 LysR substrate binding domain UNDYM_4227 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UNDYM_4230 PF01565 FAD binding domain UNDYM_4230 PF08031 Berberine and berberine like UNDYM_4234 PF00795 Carbon-nitrogen hydrolase UNDYM_4234 PF02540 NAD synthase UNDYM_4236 PF02203 Tar ligand binding domain homologue UNDYM_4236 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UNDYM_4236 PF00672 HAMP domain UNDYM_4238 PF00497 Bacterial extracellular solute-binding proteins, family 3 UNDYM_4239 PF01177 Asp/Glu/Hydantoin racemase UNDYM_4240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UNDYM_4240 PF03466 LysR substrate binding domain UNDYM_4244 PF00206 Lyase UNDYM_4244 PF10415 Fumarase C C-terminus UNDYM_4245 PF00375 Sodium:dicarboxylate symporter family UNDYM_4249 PF03466 LysR substrate binding domain UNDYM_4249 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UNDYM_4252 PF01209 ubiE/COQ5 methyltransferase family UNDYM_4254 PF05114 Protein of unknown function (DUF692) UNDYM_4265 PF03466 LysR substrate binding domain UNDYM_4265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UNDYM_4266 PF00248 Aldo/keto reductase family UNDYM_4268 PF07683 Cobalamin synthesis protein cobW C-terminal domain UNDYM_4268 PF02492 CobW/HypB/UreG, nucleotide-binding domain UNDYM_4270 PF00005 ABC transporter UNDYM_4273 PF07715 TonB-dependent Receptor Plug Domain UNDYM_4273 PF00593 TonB dependent receptor UNDYM_4278 PF12833 Helix-turn-helix domain UNDYM_4278 PF17853 GGDEF-like domain UNDYM_4281 PF12833 Helix-turn-helix domain UNDYM_4281 PF02311 AraC-like ligand binding domain UNDYM_4289 PF07690 Major Facilitator Superfamily UNDYM_4295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UNDYM_4295 PF03466 LysR substrate binding domain UNDYM_4296 PF07690 Major Facilitator Superfamily UNDYM_4300 PF07690 Major Facilitator Superfamily UNDYM_4304 PF17991 Thioredoxin like C-terminal domain UNDYM_4304 PF00578 AhpC/TSA family UNDYM_4304 PF02683 Cytochrome C biogenesis protein transmembrane region UNDYM_4305 PF02566 OsmC-like protein UNDYM_4306 PF00561 alpha/beta hydrolase fold UNDYM_4307 PF01047 MarR family UNDYM_4308 PF00106 short chain dehydrogenase UNDYM_4315 PF00459 Inositol monophosphatase family UNDYM_4319 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UNDYM_4319 PF03466 LysR substrate binding domain UNDYM_4322 PF12889 Protein of unknown function (DUF3829) UNDYM_4325 PF12833 Helix-turn-helix domain UNDYM_4326 PF07883 Cupin domain UNDYM_4329 PF07729 FCD domain UNDYM_4329 PF00392 Bacterial regulatory proteins, gntR family UNDYM_4331 PF01053 Cys/Met metabolism PLP-dependent enzyme UNDYM_4336 PF00392 Bacterial regulatory proteins, gntR family UNDYM_4336 PF00155 Aminotransferase class I and II UNDYM_4342 PF00107 Zinc-binding dehydrogenase UNDYM_4342 PF08240 Alcohol dehydrogenase GroES-like domain UNDYM_4343 PF03466 LysR substrate binding domain UNDYM_4343 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UNDYM_4351 PF01037 Lrp/AsnC ligand binding domain UNDYM_4354 PF00106 short chain dehydrogenase UNDYM_4355 PF12833 Helix-turn-helix domain UNDYM_4355 PF06719 AraC-type transcriptional regulator N-terminus UNDYM_4357 PF00892 EamA-like transporter family UNDYM_4358 PF07859 alpha/beta hydrolase fold UNDYM_4359 PF01047 MarR family UNDYM_4366 PF05170 AsmA family UNDYM_4371 PF00005 ABC transporter UNDYM_4372 PF02405 Permease MlaE UNDYM_4374 PF03631 Virulence factor BrkB UNDYM_4375 PF07995 Glucose / Sorbosone dehydrogenase UNDYM_4377 PF00563 EAL domain UNDYM_4377 PF03707 Bacterial signalling protein N terminal repeat UNDYM_4377 PF00990 Diguanylate cyclase, GGDEF domain UNDYM_4381 PF01699 Sodium/calcium exchanger protein UNDYM_4382 PF07690 Major Facilitator Superfamily UNDYM_4384 PF13609 Gram-negative porin UNDYM_4385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UNDYM_4385 PF03466 LysR substrate binding domain UNDYM_4386 PF00375 Sodium:dicarboxylate symporter family UNDYM_4392 PF10415 Fumarase C C-terminus UNDYM_4392 PF00206 Lyase UNDYM_4395 PF07715 TonB-dependent Receptor Plug Domain UNDYM_4395 PF00593 TonB dependent receptor UNDYM_4400 PF03466 LysR substrate binding domain UNDYM_4400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UNDYM_4404 PF00497 Bacterial extracellular solute-binding proteins, family 3 UNDYM_4414 PF07690 Major Facilitator Superfamily UNDYM_4415 PF03466 LysR substrate binding domain UNDYM_4415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UNDYM_4421 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain UNDYM_4421 PF00326 Prolyl oligopeptidase family UNDYM_4423 PF08719 Domain of unknown function (DUF1768) UNDYM_4425 PF12833 Helix-turn-helix domain UNDYM_4425 PF06719 AraC-type transcriptional regulator N-terminus UNDYM_4429 PF16153 Domain of unknown function (DUF4861) UNDYM_4431 PF07859 alpha/beta hydrolase fold UNDYM_4433 PF00884 Sulfatase UNDYM_4435 PF03466 LysR substrate binding domain UNDYM_4435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UNDYM_4438 PF00445 Ribonuclease T2 family UNDYM_4440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UNDYM_4440 PF00512 His Kinase A (phospho-acceptor) domain UNDYM_4440 PF00989 PAS fold UNDYM_4440 PF13493 Domain of unknown function (DUF4118) UNDYM_4440 PF08447 PAS fold UNDYM_4440 PF13426 PAS domain UNDYM_4441 PF00196 Bacterial regulatory proteins, luxR family UNDYM_4441 PF00072 Response regulator receiver domain UNDYM_4443 PF02203 Tar ligand binding domain homologue UNDYM_4443 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UNDYM_4443 PF00672 HAMP domain UNDYM_4444 PF00072 Response regulator receiver domain UNDYM_4444 PF00486 Transcriptional regulatory protein, C terminal UNDYM_4445 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UNDYM_4445 PF08447 PAS fold UNDYM_4462 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family UNDYM_4463 PF07690 Major Facilitator Superfamily UNDYM_4466 PF07715 TonB-dependent Receptor Plug Domain UNDYM_4466 PF00593 TonB dependent receptor UNDYM_4473 PF01544 CorA-like Mg2+ transporter protein UNDYM_4475 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily UNDYM_4487 PF03747 ADP-ribosylglycohydrolase UNDYM_4493 PF01612 3'-5' exonuclease UNDYM_4493 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain UNDYM_4493 PF01367 5'-3' exonuclease, C-terminal SAM fold UNDYM_4493 PF00476 DNA polymerase family A UNDYM_4494 PF03641 Possible lysine decarboxylase UNDYM_4502 PF00912 Transglycosylase UNDYM_4503 PF18317 Shikimate 5'-dehydrogenase C-terminal domain UNDYM_4503 PF01488 Shikimate / quinate 5-dehydrogenase UNDYM_4503 PF08501 Shikimate dehydrogenase substrate binding domain UNDYM_4505 PF00773 RNB domain UNDYM_4506 PF04345 Chorismate lyase UNDYM_4507 PF05728 Uncharacterised protein family (UPF0227) UNDYM_4508 PF08245 Mur ligase middle domain UNDYM_4508 PF02875 Mur ligase family, glutamate ligase domain UNDYM_4508 PF01225 Mur ligase family, catalytic domain UNDYM_4513 PF01435 Peptidase family M48 UNDYM_4514 PF05987 Bacterial protein of unknown function (DUF898) UNDYM_4517 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain UNDYM_4517 PF00289 Biotin carboxylase, N-terminal domain UNDYM_4517 PF02785 Biotin carboxylase C-terminal domain UNDYM_4518 PF00364 Biotin-requiring enzyme UNDYM_4519 PF01220 Dehydroquinase class II UNDYM_4520 PF00578 AhpC/TSA family UNDYM_4524 PF07690 Major Facilitator Superfamily UNDYM_4525 PF00529 HlyD membrane-fusion protein of T1SS UNDYM_4525 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion UNDYM_4526 PF02321 Outer membrane efflux protein UNDYM_4527 PF01047 MarR family UNDYM_4528 PF00990 Diguanylate cyclase, GGDEF domain UNDYM_4528 PF07694 5TMR of 5TMR-LYT UNDYM_4531 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion UNDYM_4532 PF00873 AcrB/AcrD/AcrF family UNDYM_4535 PF00553 Cellulose binding domain UNDYM_4535 PF02013 Cellulose or protein binding domain UNDYM_4535 PF00331 Glycosyl hydrolase family 10 UNDYM_4541 PF00440 Bacterial regulatory proteins, tetR family UNDYM_4549 PF03965 Penicillinase repressor UNDYM_4550 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain UNDYM_4550 PF04616 Glycosyl hydrolases family 43 UNDYM_4552 PF00486 Transcriptional regulatory protein, C terminal UNDYM_4552 PF00072 Response regulator receiver domain UNDYM_4553 PF00512 His Kinase A (phospho-acceptor) domain UNDYM_4553 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UNDYM_4553 PF08521 Two-component sensor kinase N-terminal UNDYM_4555 PF00474 Sodium:solute symporter family UNDYM_4558 PF01810 LysE type translocator UNDYM_4559 PF12706 Beta-lactamase superfamily domain UNDYM_4564 PF00892 EamA-like transporter family UNDYM_4565 PF00881 Nitroreductase family UNDYM_4568 PF04244 Deoxyribodipyrimidine photo-lyase-related protein UNDYM_4570 PF00484 Carbonic anhydrase UNDYM_4574 PF02798 Glutathione S-transferase, N-terminal domain UNDYM_4577 PF03459 TOBE domain UNDYM_4577 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UNDYM_4578 PF00005 ABC transporter UNDYM_4578 PF08402 TOBE domain UNDYM_4579 PF00528 Binding-protein-dependent transport system inner membrane component UNDYM_4585 PF03707 Bacterial signalling protein N terminal repeat UNDYM_4585 PF00990 Diguanylate cyclase, GGDEF domain UNDYM_4585 PF00563 EAL domain UNDYM_4586 PF00684 DnaJ central domain UNDYM_4586 PF01556 DnaJ C terminal domain UNDYM_4586 PF00226 DnaJ domain UNDYM_4587 PF00012 Hsp70 protein UNDYM_4588 PF01025 GrpE UNDYM_4589 PF16363 GDP-mannose 4,6 dehydratase UNDYM_4590 PF00483 Nucleotidyl transferase UNDYM_4591 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase UNDYM_4592 PF04321 RmlD substrate binding domain UNDYM_4593 PF05523 WxcM-like, C-terminal UNDYM_4594 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family UNDYM_4595 PF01943 Polysaccharide biosynthesis protein UNDYM_4598 PF01370 NAD dependent epimerase/dehydratase family UNDYM_4599 PF02397 Bacterial sugar transferase UNDYM_4600 PF02719 Polysaccharide biosynthesis protein UNDYM_4601 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III UNDYM_4601 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I UNDYM_4601 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II UNDYM_4601 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain UNDYM_4602 PF01075 Glycosyltransferase family 9 (heptosyltransferase) UNDYM_4603 PF12852 Cupin UNDYM_4603 PF12833 Helix-turn-helix domain UNDYM_4607 PF00793 DAHP synthetase I family UNDYM_4610 PF00534 Glycosyl transferases group 1 UNDYM_4610 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) UNDYM_4611 PF00072 Response regulator receiver domain UNDYM_4611 PF01627 Hpt domain UNDYM_4611 PF00512 His Kinase A (phospho-acceptor) domain UNDYM_4611 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UNDYM_4611 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) UNDYM_4611 PF00672 HAMP domain UNDYM_4613 PF02867 Ribonucleotide reductase, barrel domain UNDYM_4613 PF00317 Ribonucleotide reductase, all-alpha domain UNDYM_4613 PF03477 ATP cone domain UNDYM_4616 PF07731 Multicopper oxidase UNDYM_4616 PF07732 Multicopper oxidase UNDYM_4617 PF07690 Major Facilitator Superfamily UNDYM_4618 PF07690 Major Facilitator Superfamily UNDYM_4619 PF00384 Molybdopterin oxidoreductase UNDYM_4619 PF01568 Molydopterin dinucleotide binding domain UNDYM_4619 PF14710 Respiratory nitrate reductase alpha N-terminal UNDYM_4620 PF13247 4Fe-4S dicluster domain UNDYM_4620 PF14711 Respiratory nitrate reductase beta C-terminal UNDYM_4621 PF02613 Nitrate reductase delta subunit UNDYM_4622 PF02665 Nitrate reductase gamma subunit UNDYM_4623 PF09312 SurA N-terminal domain UNDYM_4623 PF00639 PPIC-type PPIASE domain UNDYM_4626 PF04055 Radical SAM superfamily UNDYM_4626 PF06463 Molybdenum Cofactor Synthesis C UNDYM_4627 PF00484 Carbonic anhydrase UNDYM_4628 PF00672 HAMP domain UNDYM_4628 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UNDYM_4628 PF07730 Histidine kinase UNDYM_4628 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term UNDYM_4629 PF00196 Bacterial regulatory proteins, luxR family UNDYM_4629 PF00072 Response regulator receiver domain UNDYM_4630 PF13545 Crp-like helix-turn-helix domain UNDYM_4630 PF00027 Cyclic nucleotide-binding domain UNDYM_4631 PF01136 Peptidase family U32 UNDYM_4632 PF01136 Peptidase family U32 UNDYM_4633 PF02036 SCP-2 sterol transfer family UNDYM_4634 PF08859 DGC domain UNDYM_4638 PF00171 Aldehyde dehydrogenase family UNDYM_4639 PF01625 Peptide methionine sulfoxide reductase UNDYM_4640 PF00578 AhpC/TSA family UNDYM_4640 PF02683 Cytochrome C biogenesis protein transmembrane region UNDYM_4640 PF17991 Thioredoxin like C-terminal domain UNDYM_4641 PF01641 SelR domain UNDYM_4642 PF00486 Transcriptional regulatory protein, C terminal UNDYM_4642 PF00072 Response regulator receiver domain UNDYM_4643 PF00989 PAS fold UNDYM_4643 PF00672 HAMP domain UNDYM_4643 PF00512 His Kinase A (phospho-acceptor) domain UNDYM_4643 PF18698 Histidine kinase sensor domain UNDYM_4643 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UNDYM_4646 PF02321 Outer membrane efflux protein UNDYM_4647 PF00873 AcrB/AcrD/AcrF family UNDYM_4648 PF00873 AcrB/AcrD/AcrF family UNDYM_4649 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion UNDYM_4650 PF07859 alpha/beta hydrolase fold UNDYM_4651 PF03466 LysR substrate binding domain UNDYM_4651 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UNDYM_4652 PF02836 Glycosyl hydrolases family 2, TIM barrel domain UNDYM_4652 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 UNDYM_4652 PF02837 Glycosyl hydrolases family 2, sugar binding domain UNDYM_4652 PF16355 Domain of unknown function (DUF4982) UNDYM_4652 PF00703 Glycosyl hydrolases family 2 UNDYM_4653 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UNDYM_4653 PF00672 HAMP domain UNDYM_4653 PF14827 Double sensory domain of two-component sensor kinase UNDYM_4653 PF13426 PAS domain UNDYM_4653 PF00512 His Kinase A (phospho-acceptor) domain UNDYM_4654 PF02374 Anion-transporting ATPase UNDYM_4655 PF03960 ArsC family UNDYM_4656 PF03358 NADPH-dependent FMN reductase UNDYM_4665 PF04055 Radical SAM superfamily UNDYM_4665 PF13186 Iron-sulfur cluster-binding domain UNDYM_4667 PF13649 Methyltransferase domain UNDYM_4673 PF01761 3-dehydroquinate synthase UNDYM_4678 PF01812 5-formyltetrahydrofolate cyclo-ligase family UNDYM_4679 PF14718 Soluble lytic murein transglycosylase L domain UNDYM_4679 PF01464 Transglycosylase SLT domain UNDYM_4680 PF00043 Glutathione S-transferase, C-terminal domain UNDYM_4680 PF13417 Glutathione S-transferase, N-terminal domain UNDYM_4681 PF01743 Poly A polymerase head domain UNDYM_4681 PF12627 Probable RNA and SrmB- binding site of polymerase A UNDYM_4681 PF01966 HD domain UNDYM_4683 PF13404 AsnC-type helix-turn-helix domain UNDYM_4683 PF01037 Lrp/AsnC ligand binding domain UNDYM_4684 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily UNDYM_4685 PF00351 Biopterin-dependent aromatic amino acid hydroxylase UNDYM_4687 PF00486 Transcriptional regulatory protein, C terminal UNDYM_4687 PF00072 Response regulator receiver domain UNDYM_4688 PF00672 HAMP domain UNDYM_4688 PF00512 His Kinase A (phospho-acceptor) domain UNDYM_4688 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UNDYM_4690 PF01810 LysE type translocator UNDYM_4691 PF03466 LysR substrate binding domain UNDYM_4691 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UNDYM_4692 PF03279 Bacterial lipid A biosynthesis acyltransferase UNDYM_4694 PF02773 S-adenosylmethionine synthetase, C-terminal domain UNDYM_4694 PF02772 S-adenosylmethionine synthetase, central domain UNDYM_4694 PF00438 S-adenosylmethionine synthetase, N-terminal domain UNDYM_4696 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UNDYM_4696 PF03466 LysR substrate binding domain UNDYM_4698 PF01738 Dienelactone hydrolase family UNDYM_4699 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain UNDYM_4699 PF07992 Pyridine nucleotide-disulphide oxidoreductase UNDYM_4703 PF00581 Rhodanese-like domain UNDYM_4704 PF00892 EamA-like transporter family UNDYM_4707 PF07729 FCD domain UNDYM_4707 PF00392 Bacterial regulatory proteins, gntR family UNDYM_4709 PF00561 alpha/beta hydrolase fold UNDYM_4715 PF02609 Exonuclease VII small subunit UNDYM_4716 PF00348 Polyprenyl synthetase UNDYM_4717 PF02780 Transketolase, C-terminal domain UNDYM_4717 PF13292 1-deoxy-D-xylulose-5-phosphate synthase UNDYM_4717 PF02779 Transketolase, pyrimidine binding domain UNDYM_4718 PF02780 Transketolase, C-terminal domain UNDYM_4718 PF02779 Transketolase, pyrimidine binding domain UNDYM_4718 PF13292 1-deoxy-D-xylulose-5-phosphate synthase UNDYM_4723 PF06314 Acetoacetate decarboxylase (ADC) UNDYM_4728 PF01923 Cobalamin adenosyltransferase UNDYM_4730 PF01565 FAD binding domain UNDYM_4730 PF02913 FAD linked oxidases, C-terminal domain UNDYM_4731 PF03466 LysR substrate binding domain UNDYM_4731 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UNDYM_4732 PF00563 EAL domain UNDYM_4732 PF00990 Diguanylate cyclase, GGDEF domain UNDYM_4732 PF03707 Bacterial signalling protein N terminal repeat UNDYM_4733 PF00248 Aldo/keto reductase family UNDYM_4735 PF03702 Anhydro-N-acetylmuramic acid kinase UNDYM_4737 PF01476 LysM domain UNDYM_4737 PF01551 Peptidase family M23 UNDYM_4737 PF08525 Opacity-associated protein A N-terminal motif UNDYM_4738 PF01479 S4 domain UNDYM_4738 PF00579 tRNA synthetases class I (W and Y) UNDYM_4739 PF02580 D-Tyr-tRNA(Tyr) deacylase UNDYM_4740 PF00300 Histidine phosphatase superfamily (branch 1) UNDYM_4744 PF01022 Bacterial regulatory protein, arsR family UNDYM_4745 PF00072 Response regulator receiver domain UNDYM_4745 PF04397 LytTr DNA-binding domain UNDYM_4746 PF02743 Cache domain UNDYM_4746 PF00672 HAMP domain UNDYM_4746 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UNDYM_4746 PF06580 Histidine kinase UNDYM_4750 PF07992 Pyridine nucleotide-disulphide oxidoreductase UNDYM_4751 PF01207 Dihydrouridine synthase (Dus) UNDYM_4752 PF02954 Bacterial regulatory protein, Fis family UNDYM_4753 PF01808 AICARFT/IMPCHase bienzyme UNDYM_4753 PF02142 MGS-like domain UNDYM_4755 PF02075 Crossover junction endodeoxyribonuclease RuvC UNDYM_4756 PF07499 RuvA, C-terminal domain UNDYM_4756 PF01330 RuvA N terminal domain UNDYM_4757 PF05496 Holliday junction DNA helicase RuvB P-loop domain UNDYM_4757 PF05491 RuvB C-terminal winged helix domain UNDYM_4757 PF17864 RuvB AAA lid domain UNDYM_4758 PF01557 Fumarylacetoacetate (FAA) hydrolase family UNDYM_4759 PF13609 Gram-negative porin UNDYM_4760 PF13609 Gram-negative porin UNDYM_4761 PF03232 Ubiquinone biosynthesis protein COQ7 UNDYM_4762 PF13361 UvrD-like helicase C-terminal domain UNDYM_4762 PF00580 UvrD/REP helicase N-terminal domain UNDYM_4763 PF00701 Dihydrodipicolinate synthetase family UNDYM_4766 PF02581 Thiamine monophosphate synthase UNDYM_4767 PF08543 Phosphomethylpyrimidine kinase UNDYM_4768 PF05690 Thiazole biosynthesis protein ThiG UNDYM_4769 PF04480 Protein of unknown function (DUF559) UNDYM_4770 PF02597 ThiS family UNDYM_4771 PF13667 ThiC-associated domain UNDYM_4771 PF01964 Radical SAM ThiC family UNDYM_4773 PF00990 Diguanylate cyclase, GGDEF domain UNDYM_4773 PF05230 MASE2 domain UNDYM_4774 PF03707 Bacterial signalling protein N terminal repeat UNDYM_4774 PF00990 Diguanylate cyclase, GGDEF domain UNDYM_4774 PF00563 EAL domain UNDYM_4777 PF10458 Valyl tRNA synthetase tRNA binding arm UNDYM_4777 PF00133 tRNA synthetases class I (I, L, M and V) UNDYM_4777 PF08264 Anticodon-binding domain of tRNA UNDYM_4780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UNDYM_4780 PF08447 PAS fold UNDYM_4780 PF08448 PAS fold UNDYM_4783 PF01979 Amidohydrolase family UNDYM_4786 PF00005 ABC transporter UNDYM_4787 PF00528 Binding-protein-dependent transport system inner membrane component UNDYM_4788 PF00528 Binding-protein-dependent transport system inner membrane component UNDYM_4789 PF00497 Bacterial extracellular solute-binding proteins, family 3 UNDYM_4790 PF00497 Bacterial extracellular solute-binding proteins, family 3 UNDYM_4791 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase UNDYM_4791 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain UNDYM_4792 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UNDYM_4792 PF03466 LysR substrate binding domain UNDYM_4793 PF00005 ABC transporter UNDYM_4793 PF00664 ABC transporter transmembrane region UNDYM_4796 PF03061 Thioesterase superfamily UNDYM_4797 PF09423 PhoD-like phosphatase UNDYM_4797 PF16655 PhoD-like phosphatase, N-terminal domain UNDYM_4798 PF13193 AMP-binding enzyme C-terminal domain UNDYM_4798 PF00501 AMP-binding enzyme UNDYM_4799 PF01568 Molydopterin dinucleotide binding domain UNDYM_4799 PF00384 Molybdopterin oxidoreductase UNDYM_4799 PF04879 Molybdopterin oxidoreductase Fe4S4 domain UNDYM_4800 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase UNDYM_4800 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase UNDYM_4801 PF09411 Lipid A 3-O-deacylase (PagL) UNDYM_4803 PF00378 Enoyl-CoA hydratase/isomerase UNDYM_4804 PF00378 Enoyl-CoA hydratase/isomerase UNDYM_4806 PF04379 ApaG domain UNDYM_4807 PF00834 Ribulose-phosphate 3 epimerase family UNDYM_4808 PF13419 Haloacid dehalogenase-like hydrolase UNDYM_4809 PF00425 chorismate binding enzyme UNDYM_4809 PF04715 Anthranilate synthase component I, N terminal region UNDYM_4810 PF00117 Glutamine amidotransferase class-I UNDYM_4811 PF00591 Glycosyl transferase family, a/b domain UNDYM_4811 PF02885 Glycosyl transferase family, helical bundle domain UNDYM_4812 PF00218 Indole-3-glycerol phosphate synthase UNDYM_4816 PF02542 YgbB family UNDYM_4816 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase UNDYM_4817 PF10411 Disulfide bond isomerase protein N-terminus UNDYM_4817 PF13098 Thioredoxin-like domain UNDYM_4818 PF01494 FAD binding domain UNDYM_4819 PF01965 DJ-1/PfpI family UNDYM_4819 PF12833 Helix-turn-helix domain UNDYM_4822 PF04069 Substrate binding domain of ABC-type glycine betaine transport system UNDYM_4823 PF00005 ABC transporter UNDYM_4824 PF00528 Binding-protein-dependent transport system inner membrane component UNDYM_4828 PF03009 Glycerophosphoryl diester phosphodiesterase family UNDYM_4830 PF06414 Zeta toxin UNDYM_4833 PF00472 RF-1 domain UNDYM_4834 PF09278 MerR, DNA binding UNDYM_4834 PF00376 MerR family regulatory protein UNDYM_4835 PF01804 Penicillin amidase UNDYM_4836 PF01594 AI-2E family transporter UNDYM_4838 PF00248 Aldo/keto reductase family UNDYM_4840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UNDYM_4840 PF03466 LysR substrate binding domain UNDYM_4841 PF02771 Acyl-CoA dehydrogenase, N-terminal domain UNDYM_4841 PF08028 Acyl-CoA dehydrogenase, C-terminal domain UNDYM_4842 PF00005 ABC transporter UNDYM_4842 PF09383 NIL domain UNDYM_4843 PF00528 Binding-protein-dependent transport system inner membrane component UNDYM_4844 PF03180 NLPA lipoprotein UNDYM_4845 PF00296 Luciferase-like monooxygenase UNDYM_4846 PF00296 Luciferase-like monooxygenase UNDYM_4847 PF09084 NMT1/THI5 like UNDYM_4848 PF00528 Binding-protein-dependent transport system inner membrane component UNDYM_4849 PF00005 ABC transporter UNDYM_4850 PF05209 Septum formation inhibitor MinC, N-terminal domain UNDYM_4850 PF03775 Septum formation inhibitor MinC, C-terminal domain UNDYM_4851 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain UNDYM_4852 PF03776 Septum formation topological specificity factor MinE UNDYM_4853 PF00072 Response regulator receiver domain UNDYM_4853 PF00486 Transcriptional regulatory protein, C terminal UNDYM_4855 PF00512 His Kinase A (phospho-acceptor) domain UNDYM_4855 PF00989 PAS fold UNDYM_4855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UNDYM_4856 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain UNDYM_4856 PF01488 Shikimate / quinate 5-dehydrogenase UNDYM_4856 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain UNDYM_4857 PF03462 PCRF domain UNDYM_4857 PF00472 RF-1 domain UNDYM_4858 PF02600 Disulfide bond formation protein DsbB UNDYM_4859 PF05175 Methyltransferase small domain UNDYM_4859 PF17827 PrmC N-terminal domain UNDYM_4869 PF00005 ABC transporter UNDYM_4871 PF01435 Peptidase family M48 UNDYM_4873 PF00005 ABC transporter UNDYM_4874 PF02687 FtsX-like permease family UNDYM_4874 PF12704 MacB-like periplasmic core domain UNDYM_4875 PF12704 MacB-like periplasmic core domain UNDYM_4875 PF02687 FtsX-like permease family UNDYM_4875 PF00005 ABC transporter UNDYM_4876 PF02954 Bacterial regulatory protein, Fis family UNDYM_4876 PF00072 Response regulator receiver domain UNDYM_4876 PF00158 Sigma-54 interaction domain UNDYM_4877 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UNDYM_4877 PF00512 His Kinase A (phospho-acceptor) domain UNDYM_4877 PF00672 HAMP domain UNDYM_4878 PF00672 HAMP domain UNDYM_4878 PF16750 Sensor domain of 2-component histidine kinase UNDYM_4878 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UNDYM_4878 PF00512 His Kinase A (phospho-acceptor) domain UNDYM_4879 PF00072 Response regulator receiver domain UNDYM_4879 PF00486 Transcriptional regulatory protein, C terminal UNDYM_4882 PF12848 ABC transporter UNDYM_4882 PF16326 ABC transporter C-terminal domain UNDYM_4882 PF00005 ABC transporter UNDYM_4883 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UNDYM_4883 PF07730 Histidine kinase UNDYM_4883 PF05231 MASE1 UNDYM_4884 PF00196 Bacterial regulatory proteins, luxR family UNDYM_4884 PF00072 Response regulator receiver domain UNDYM_4895 PF16921 Tex protein YqgF-like domain UNDYM_4895 PF09371 Tex-like protein N-terminal domain UNDYM_4895 PF00575 S1 RNA binding domain UNDYM_4895 PF17674 HHH domain UNDYM_4896 PF00171 Aldehyde dehydrogenase family UNDYM_4898 PF01590 GAF domain UNDYM_4898 PF02954 Bacterial regulatory protein, Fis family UNDYM_4898 PF00158 Sigma-54 interaction domain UNDYM_4899 PF00462 Glutaredoxin UNDYM_4900 PF02441 Flavoprotein UNDYM_4907 PF00326 Prolyl oligopeptidase family UNDYM_4907 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region UNDYM_4908 PF04386 Stringent starvation protein B UNDYM_4909 PF00043 Glutathione S-transferase, C-terminal domain UNDYM_4909 PF02798 Glutathione S-transferase, N-terminal domain UNDYM_4910 PF02167 Cytochrome C1 family UNDYM_4911 PF00033 Cytochrome b/b6/petB UNDYM_4911 PF00032 Cytochrome b(C-terminal)/b6/petD UNDYM_4912 PF00032 Cytochrome b(C-terminal)/b6/petD UNDYM_4912 PF00033 Cytochrome b/b6/petB UNDYM_4913 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal UNDYM_4913 PF00355 Rieske [2Fe-2S] domain UNDYM_4914 PF01741 Large-conductance mechanosensitive channel, MscL UNDYM_4915 PF01784 NIF3 (NGG1p interacting factor 3) UNDYM_4916 PF13180 PDZ domain UNDYM_4916 PF17820 PDZ domain UNDYM_4918 PF00902 Sec-independent protein translocase protein (TatC) UNDYM_4919 PF02416 mttA/Hcf106 family UNDYM_4920 PF02416 mttA/Hcf106 family UNDYM_4922 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase UNDYM_4923 PF01502 Phosphoribosyl-AMP cyclohydrolase UNDYM_4924 PF00977 Histidine biosynthesis protein UNDYM_4925 PF00977 Histidine biosynthesis protein UNDYM_4926 PF00117 Glutamine amidotransferase class-I UNDYM_4927 PF00475 Imidazoleglycerol-phosphate dehydratase UNDYM_4928 PF00155 Aminotransferase class I and II UNDYM_4929 PF01555 DNA methylase UNDYM_4930 PF00815 Histidinol dehydrogenase UNDYM_4931 PF01634 ATP phosphoribosyltransferase UNDYM_4932 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) UNDYM_4933 PF01722 BolA-like protein UNDYM_4934 PF01061 ABC-2 type transporter UNDYM_4935 PF00005 ABC transporter UNDYM_4939 PF02470 MlaD protein UNDYM_4940 PF02405 Permease MlaE UNDYM_4941 PF00005 ABC transporter UNDYM_4942 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster UNDYM_4942 PF07992 Pyridine nucleotide-disulphide oxidoreductase UNDYM_4943 PF04898 Glutamate synthase central domain UNDYM_4943 PF01645 Conserved region in glutamate synthase UNDYM_4943 PF01493 GXGXG motif UNDYM_4943 PF00310 Glutamine amidotransferases class-II UNDYM_4947 PF01263 Aldose 1-epimerase UNDYM_4949 PF01370 NAD dependent epimerase/dehydratase family UNDYM_4950 PF00356 Bacterial regulatory proteins, lacI family UNDYM_4952 PF07715 TonB-dependent Receptor Plug Domain UNDYM_4952 PF00593 TonB dependent receptor UNDYM_4954 PF00271 Helicase conserved C-terminal domain UNDYM_4954 PF00270 DEAD/DEAH box helicase UNDYM_4957 PF00436 Single-strand binding protein family UNDYM_4958 PF07690 Major Facilitator Superfamily UNDYM_4959 PF17755 UvrA DNA-binding domain UNDYM_4959 PF17760 UvrA interaction domain UNDYM_4960 PF01195 Peptidyl-tRNA hydrolase UNDYM_4966 PF07690 Major Facilitator Superfamily UNDYM_4968 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle UNDYM_4968 PF12793 Sugar transport-related sRNA regulator N-term UNDYM_4969 PF01554 MatE UNDYM_4971 PF06071 Protein of unknown function (DUF933) UNDYM_4971 PF01926 50S ribosome-binding GTPase UNDYM_4972 PF00990 Diguanylate cyclase, GGDEF domain UNDYM_4972 PF00072 Response regulator receiver domain UNDYM_4973 PF00356 Bacterial regulatory proteins, lacI family UNDYM_4975 PF01965 DJ-1/PfpI family UNDYM_4975 PF12833 Helix-turn-helix domain UNDYM_4977 PF00990 Diguanylate cyclase, GGDEF domain UNDYM_4977 PF00072 Response regulator receiver domain UNDYM_4978 PF00037 4Fe-4S binding domain UNDYM_4979 PF01467 Cytidylyltransferase-like UNDYM_4981 PF00448 SRP54-type protein, GTPase domain UNDYM_4981 PF02881 SRP54-type protein, helical bundle domain UNDYM_4982 PF00005 ABC transporter UNDYM_4983 PF18075 FtsX extracellular domain UNDYM_4984 PF04545 Sigma-70, region 4 UNDYM_4984 PF04542 Sigma-70 region 2 UNDYM_4984 PF00140 Sigma-70 factor, region 1.2 UNDYM_4985 PF02630 SCO1/SenC UNDYM_4986 PF01040 UbiA prenyltransferase family UNDYM_4987 PF02628 Cytochrome oxidase assembly protein UNDYM_4991 PF00510 Cytochrome c oxidase subunit III UNDYM_4993 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 UNDYM_4994 PF00115 Cytochrome C and Quinol oxidase polypeptide I UNDYM_4995 PF00116 Cytochrome C oxidase subunit II, periplasmic domain UNDYM_4995 PF02790 Cytochrome C oxidase subunit II, transmembrane domain UNDYM_4997 PF08241 Methyltransferase domain UNDYM_4998 PF00156 Phosphoribosyl transferase domain UNDYM_4999 PF00588 SpoU rRNA Methylase family UNDYM_5000 PF00563 EAL domain UNDYM_5000 PF08447 PAS fold UNDYM_5000 PF00990 Diguanylate cyclase, GGDEF domain UNDYM_5000 PF08448 PAS fold UNDYM_5001 PF01467 Cytidylyltransferase-like UNDYM_5003 PF03466 LysR substrate binding domain UNDYM_5003 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UNDYM_5004 PF00005 ABC transporter UNDYM_5004 PF17850 CysA C-terminal regulatory domain UNDYM_5004 PF12857 TOBE-like domain UNDYM_5005 PF00528 Binding-protein-dependent transport system inner membrane component UNDYM_5006 PF00528 Binding-protein-dependent transport system inner membrane component UNDYM_5008 PF03459 TOBE domain UNDYM_5009 PF00005 ABC transporter UNDYM_5010 PF00528 Binding-protein-dependent transport system inner membrane component UNDYM_5011 PF00296 Luciferase-like monooxygenase UNDYM_5012 PF09084 NMT1/THI5 like UNDYM_5013 PF09084 NMT1/THI5 like UNDYM_5014 PF03358 NADPH-dependent FMN reductase UNDYM_5016 PF00255 Glutathione peroxidase UNDYM_5017 PF01614 Bacterial transcriptional regulator UNDYM_5017 PF09339 IclR helix-turn-helix domain UNDYM_5019 PF01494 FAD binding domain UNDYM_5022 PF01593 Flavin containing amine oxidoreductase UNDYM_5032 PF00216 Bacterial DNA-binding protein UNDYM_5063 PF01323 DSBA-like thioredoxin domain UNDYM_5070 PF00437 Type II/IV secretion system protein UNDYM_5090 PF00884 Sulfatase UNDYM_5094 PF00724 NADH:flavin oxidoreductase / NADH oxidase family UNDYM_5094 PF07992 Pyridine nucleotide-disulphide oxidoreductase UNDYM_5097 PF02566 OsmC-like protein UNDYM_5098 PF02777 Iron/manganese superoxide dismutases, C-terminal domain UNDYM_5098 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain UNDYM_5103 PF13458 Periplasmic binding protein UNDYM_5106 PF03793 PASTA domain UNDYM_5106 PF00069 Protein kinase domain UNDYM_5108 PF06508 Queuosine biosynthesis protein QueC UNDYM_5115 PF00550 Phosphopantetheine attachment site UNDYM_5117 PF02146 Sir2 family UNDYM_5118 PF07969 Amidohydrolase family UNDYM_5120 PF00497 Bacterial extracellular solute-binding proteins, family 3 UNDYM_5121 PF06299 Protein of unknown function (DUF1045) UNDYM_5122 PF03466 LysR substrate binding domain UNDYM_5122 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UNDYM_5123 PF13460 NAD(P)H-binding UNDYM_5124 PF07690 Major Facilitator Superfamily UNDYM_5126 PF00561 alpha/beta hydrolase fold UNDYM_5127 PF04055 Radical SAM superfamily UNDYM_5127 PF02310 B12 binding domain UNDYM_5128 PF02515 CoA-transferase family III UNDYM_5130 PF00285 Citrate synthase, C-terminal domain UNDYM_5131 PF13443 Cro/C1-type HTH DNA-binding domain UNDYM_5133 PF07715 TonB-dependent Receptor Plug Domain UNDYM_5133 PF00593 TonB dependent receptor UNDYM_5135 PF06969 HemN C-terminal domain UNDYM_5135 PF04055 Radical SAM superfamily UNDYM_5140 PF00313 'Cold-shock' DNA-binding domain UNDYM_5146 PF00005 ABC transporter UNDYM_5154 PF03466 LysR substrate binding domain UNDYM_5154 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UNDYM_5155 PF00857 Isochorismatase family UNDYM_5156 PF01979 Amidohydrolase family UNDYM_5166 PF16655 PhoD-like phosphatase, N-terminal domain UNDYM_5166 PF09423 PhoD-like phosphatase UNDYM_5168 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) UNDYM_5169 PF04241 Protein of unknown function (DUF423) UNDYM_5173 PF00672 HAMP domain UNDYM_5173 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UNDYM_5173 PF02203 Tar ligand binding domain homologue UNDYM_5174 PF01678 Diaminopimelate epimerase UNDYM_5176 PF00589 Phage integrase family UNDYM_5176 PF02899 Phage integrase, N-terminal SAM-like domain UNDYM_5177 PF00691 OmpA family UNDYM_5177 PF04972 BON domain UNDYM_5180 PF07683 Cobalamin synthesis protein cobW C-terminal domain UNDYM_5180 PF02492 CobW/HypB/UreG, nucleotide-binding domain UNDYM_5181 PF01258 Prokaryotic dksA/traR C4-type zinc finger UNDYM_5183 PF07715 TonB-dependent Receptor Plug Domain UNDYM_5183 PF00593 TonB dependent receptor UNDYM_5185 PF00227 Proteasome subunit UNDYM_5186 PF00004 ATPase family associated with various cellular activities (AAA) UNDYM_5186 PF07724 AAA domain (Cdc48 subfamily) UNDYM_5188 PF13185 GAF domain UNDYM_5191 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus UNDYM_5191 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus UNDYM_5193 PF02556 Preprotein translocase subunit SecB UNDYM_5194 PF00462 Glutaredoxin UNDYM_5195 PF00581 Rhodanese-like domain UNDYM_5196 PF00300 Histidine phosphatase superfamily (branch 1) UNDYM_5197 PF01551 Peptidase family M23 UNDYM_5198 PF13180 PDZ domain UNDYM_5198 PF03572 Peptidase family S41 UNDYM_5199 PF00899 ThiF family UNDYM_5200 PF02798 Glutathione S-transferase, N-terminal domain UNDYM_5200 PF00043 Glutathione S-transferase, C-terminal domain UNDYM_5201 PF05175 Methyltransferase small domain UNDYM_5202 PF05762 VWA domain containing CoxE-like protein UNDYM_5204 PF07728 AAA domain (dynein-related subfamily) UNDYM_5209 PF00005 ABC transporter UNDYM_5210 PF00005 ABC transporter UNDYM_5210 PF12399 Branched-chain amino acid ATP-binding cassette transporter UNDYM_5213 PF00425 chorismate binding enzyme UNDYM_5213 PF04715 Anthranilate synthase component I, N terminal region UNDYM_5214 PF05231 MASE1 UNDYM_5214 PF13426 PAS domain UNDYM_5214 PF08448 PAS fold UNDYM_5214 PF00563 EAL domain UNDYM_5214 PF08447 PAS fold UNDYM_5214 PF00990 Diguanylate cyclase, GGDEF domain UNDYM_5217 PF00440 Bacterial regulatory proteins, tetR family UNDYM_5219 PF00696 Amino acid kinase family UNDYM_5220 PF04542 Sigma-70 region 2 UNDYM_5220 PF08281 Sigma-70, region 4 UNDYM_5223 PF01227 GTP cyclohydrolase I UNDYM_5226 PF04011 LemA family UNDYM_5227 PF04972 BON domain UNDYM_5228 PF13580 SIS domain UNDYM_5229 PF02021 Uncharacterised protein family UPF0102 UNDYM_5230 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases UNDYM_5231 PF05036 Sporulation related domain UNDYM_5231 PF03330 Lytic transglycolase UNDYM_5232 PF01098 Cell cycle protein UNDYM_5233 PF00905 Penicillin binding protein transpeptidase domain UNDYM_5233 PF03717 Penicillin-binding Protein dimerisation domain UNDYM_5236 PF04085 rod shape-determining protein MreC UNDYM_5238 PF02686 Glu-tRNAGln amidotransferase C subunit UNDYM_5239 PF01425 Amidase UNDYM_5240 PF02637 GatB domain UNDYM_5240 PF02934 GatB/GatE catalytic domain UNDYM_5241 PF02321 Outer membrane efflux protein UNDYM_5242 PF00529 HlyD membrane-fusion protein of T1SS UNDYM_5243 PF00005 ABC transporter UNDYM_5243 PF00664 ABC transporter transmembrane region UNDYM_5244 PF00534 Glycosyl transferases group 1 UNDYM_5244 PF13439 Glycosyltransferase Family 4 UNDYM_5248 PF13649 Methyltransferase domain UNDYM_5252 PF00211 Adenylate and Guanylate cyclase catalytic domain UNDYM_5254 PF13545 Crp-like helix-turn-helix domain UNDYM_5254 PF00027 Cyclic nucleotide-binding domain UNDYM_5255 PF03062 MBOAT, membrane-bound O-acyltransferase family UNDYM_5257 PF00534 Glycosyl transferases group 1 UNDYM_5257 PF13439 Glycosyltransferase Family 4 UNDYM_5259 PF01050 Mannose-6-phosphate isomerase UNDYM_5259 PF00483 Nucleotidyl transferase UNDYM_5261 PF00005 ABC transporter UNDYM_5262 PF00534 Glycosyl transferases group 1 UNDYM_5262 PF13439 Glycosyltransferase Family 4 UNDYM_5263 PF00534 Glycosyl transferases group 1 UNDYM_5263 PF13439 Glycosyltransferase Family 4 UNDYM_5264 PF16363 GDP-mannose 4,6 dehydratase UNDYM_5265 PF16363 GDP-mannose 4,6 dehydratase UNDYM_5266 PF00156 Phosphoribosyl transferase domain UNDYM_5267 PF13439 Glycosyltransferase Family 4 UNDYM_5269 PF03372 Endonuclease/Exonuclease/phosphatase family UNDYM_5270 PF02872 5'-nucleotidase, C-terminal domain UNDYM_5270 PF17936 Bacterial Ig domain UNDYM_5270 PF00149 Calcineurin-like phosphoesterase UNDYM_5274 PF00561 alpha/beta hydrolase fold UNDYM_5274 PF07021 Methionine biosynthesis protein MetW UNDYM_5275 PF00561 alpha/beta hydrolase fold UNDYM_5276 PF02896 PEP-utilising enzyme, TIM barrel domain UNDYM_5276 PF05524 PEP-utilising enzyme, N-terminal UNDYM_5276 PF00391 PEP-utilising enzyme, mobile domain UNDYM_5277 PF00381 PTS HPr component phosphorylation site UNDYM_5280 PF02951 Prokaryotic glutathione synthetase, N-terminal domain UNDYM_5280 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain UNDYM_5282 PF03992 Antibiotic biosynthesis monooxygenase UNDYM_5284 PF01124 MAPEG family UNDYM_5286 PF08448 PAS fold UNDYM_5286 PF00990 Diguanylate cyclase, GGDEF domain UNDYM_5288 PF00027 Cyclic nucleotide-binding domain UNDYM_5288 PF07885 Ion channel UNDYM_5289 PF00501 AMP-binding enzyme UNDYM_5290 PF12399 Branched-chain amino acid ATP-binding cassette transporter UNDYM_5290 PF00005 ABC transporter UNDYM_5291 PF02653 Branched-chain amino acid transport system / permease component UNDYM_5294 PF00005 ABC transporter UNDYM_5295 PF14535 AMP-binding enzyme C-terminal domain UNDYM_5295 PF00501 AMP-binding enzyme UNDYM_5296 PF01799 [2Fe-2S] binding domain UNDYM_5296 PF00111 2Fe-2S iron-sulfur cluster binding domain UNDYM_5297 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase UNDYM_5300 PF00194 Eukaryotic-type carbonic anhydrase UNDYM_5303 PF00378 Enoyl-CoA hydratase/isomerase UNDYM_5304 PF12833 Helix-turn-helix domain UNDYM_5304 PF02311 AraC-like ligand binding domain UNDYM_5308 PF00753 Metallo-beta-lactamase superfamily UNDYM_5308 PF16123 Hydroxyacylglutathione hydrolase C-terminus UNDYM_5313 PF01593 Flavin containing amine oxidoreductase UNDYM_5314 PF00563 EAL domain UNDYM_5314 PF00990 Diguanylate cyclase, GGDEF domain UNDYM_5314 PF03707 Bacterial signalling protein N terminal repeat UNDYM_5318 PF16901 C-terminal domain of alpha-glycerophosphate oxidase UNDYM_5318 PF01266 FAD dependent oxidoreductase UNDYM_5321 PF13462 Thioredoxin UNDYM_5323 PF12704 MacB-like periplasmic core domain UNDYM_5323 PF02687 FtsX-like permease family UNDYM_5323 PF00005 ABC transporter UNDYM_5324 PF12704 MacB-like periplasmic core domain UNDYM_5324 PF02687 FtsX-like permease family UNDYM_5324 PF00005 ABC transporter UNDYM_5325 PF00529 HlyD membrane-fusion protein of T1SS UNDYM_5325 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion UNDYM_5327 PF00005 ABC transporter UNDYM_5331 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain UNDYM_5331 PF00326 Prolyl oligopeptidase family UNDYM_5332 PF04262 Glutamate-cysteine ligase UNDYM_5335 PF00857 Isochorismatase family UNDYM_5339 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family UNDYM_5344 PF03466 LysR substrate binding domain UNDYM_5344 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UNDYM_5345 PF02798 Glutathione S-transferase, N-terminal domain UNDYM_5345 PF00043 Glutathione S-transferase, C-terminal domain UNDYM_5346 PF01361 Tautomerase enzyme UNDYM_5349 PF10017 Histidine-specific methyltransferase, SAM-dependent UNDYM_5350 PF03781 Sulfatase-modifying factor enzyme 1 UNDYM_5350 PF12867 DinB superfamily UNDYM_5354 PF00682 HMGL-like UNDYM_5358 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UNDYM_5358 PF00989 PAS fold UNDYM_5358 PF00512 His Kinase A (phospho-acceptor) domain UNDYM_5359 PF00158 Sigma-54 interaction domain UNDYM_5359 PF00072 Response regulator receiver domain UNDYM_5359 PF02954 Bacterial regulatory protein, Fis family UNDYM_5363 PF00072 Response regulator receiver domain UNDYM_5363 PF01584 CheW-like domain UNDYM_5363 PF02895 Signal transducing histidine kinase, homodimeric domain UNDYM_5363 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UNDYM_5363 PF01627 Hpt domain UNDYM_5364 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UNDYM_5364 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term UNDYM_5365 PF01584 CheW-like domain UNDYM_5366 PF00072 Response regulator receiver domain UNDYM_5367 PF00486 Transcriptional regulatory protein, C terminal UNDYM_5367 PF00072 Response regulator receiver domain UNDYM_5368 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ UNDYM_5369 PF00289 Biotin carboxylase, N-terminal domain UNDYM_5369 PF02785 Biotin carboxylase C-terminal domain UNDYM_5369 PF00364 Biotin-requiring enzyme UNDYM_5369 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain UNDYM_5370 PF04055 Radical SAM superfamily UNDYM_5370 PF06968 Biotin and Thiamin Synthesis associated domain UNDYM_5372 PF00155 Aminotransferase class I and II UNDYM_5373 PF00202 Aminotransferase class-III UNDYM_5375 PF00378 Enoyl-CoA hydratase/isomerase UNDYM_5376 PF13180 PDZ domain UNDYM_5379 PF01039 Carboxyl transferase domain UNDYM_5382 PF02771 Acyl-CoA dehydrogenase, N-terminal domain UNDYM_5382 PF02770 Acyl-CoA dehydrogenase, middle domain UNDYM_5382 PF00441 Acyl-CoA dehydrogenase, C-terminal domain UNDYM_5384 PF00108 Thiolase, N-terminal domain UNDYM_5384 PF02803 Thiolase, C-terminal domain UNDYM_5385 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) UNDYM_5386 PF00291 Pyridoxal-phosphate dependent enzyme UNDYM_5387 PF02771 Acyl-CoA dehydrogenase, N-terminal domain UNDYM_5387 PF00441 Acyl-CoA dehydrogenase, C-terminal domain UNDYM_5387 PF02770 Acyl-CoA dehydrogenase, middle domain UNDYM_5389 PF13411 MerR HTH family regulatory protein UNDYM_5397 PF08281 Sigma-70, region 4 UNDYM_5397 PF04542 Sigma-70 region 2 UNDYM_5400 PF10438 Cyclo-malto-dextrinase C-terminal domain UNDYM_5400 PF09087 Cyclomaltodextrinase, N-terminal UNDYM_5400 PF00128 Alpha amylase, catalytic domain UNDYM_5401 PF01118 Semialdehyde dehydrogenase, NAD binding domain UNDYM_5401 PF02774 Semialdehyde dehydrogenase, dimerisation domain UNDYM_5402 PF00892 EamA-like transporter family UNDYM_5405 PF07715 TonB-dependent Receptor Plug Domain UNDYM_5405 PF00593 TonB dependent receptor UNDYM_5406 PF01497 Periplasmic binding protein UNDYM_5407 PF00106 short chain dehydrogenase UNDYM_5408 PF13462 Thioredoxin UNDYM_5410 PF03485 Arginyl tRNA synthetase N terminal domain UNDYM_5410 PF05746 DALR anticodon binding domain UNDYM_5410 PF00750 tRNA synthetases class I (R) UNDYM_5412 PF04381 Putative exonuclease, RdgC UNDYM_5415 PF01131 DNA topoisomerase UNDYM_5415 PF01751 Toprim domain UNDYM_5416 PF04361 Protein of unknown function (DUF494) UNDYM_5417 PF17782 DprA winged helix domain UNDYM_5417 PF02481 DNA recombination-mediator protein A UNDYM_5419 PF01327 Polypeptide deformylase UNDYM_5420 PF00551 Formyl transferase UNDYM_5420 PF02911 Formyl transferase, C-terminal domain UNDYM_5423 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UNDYM_5423 PF03466 LysR substrate binding domain UNDYM_5424 PF01027 Inhibitor of apoptosis-promoting Bax1 UNDYM_5425 PF03741 Integral membrane protein TerC family UNDYM_5427 PF00196 Bacterial regulatory proteins, luxR family UNDYM_5427 PF00072 Response regulator receiver domain UNDYM_5428 PF00809 Pterin binding enzyme UNDYM_5428 PF02310 B12 binding domain UNDYM_5428 PF02607 B12 binding domain UNDYM_5428 PF02574 Homocysteine S-methyltransferase UNDYM_5428 PF02965 Vitamin B12 dependent methionine synthase, activation domain UNDYM_5430 PF00593 TonB dependent receptor UNDYM_5430 PF07715 TonB-dependent Receptor Plug Domain UNDYM_5431 PF03466 LysR substrate binding domain UNDYM_5431 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UNDYM_5435 PF11871 Domain of unknown function (DUF3391) UNDYM_5435 PF01966 HD domain UNDYM_5436 PF03707 Bacterial signalling protein N terminal repeat UNDYM_5436 PF00990 Diguanylate cyclase, GGDEF domain UNDYM_5436 PF00563 EAL domain UNDYM_5438 PF02142 MGS-like domain UNDYM_5443 PF10077 Uncharacterized protein conserved in bacteria (DUF2314) UNDYM_5445 PF02417 Chromate transporter UNDYM_5450 PF00392 Bacterial regulatory proteins, gntR family UNDYM_5450 PF00155 Aminotransferase class I and II UNDYM_5451 PF00375 Sodium:dicarboxylate symporter family UNDYM_5452 PF07690 Major Facilitator Superfamily UNDYM_5453 PF03471 Transporter associated domain UNDYM_5453 PF00571 CBS domain UNDYM_5453 PF01595 Cyclin M transmembrane N-terminal domain UNDYM_5454 PF00012 Hsp70 protein UNDYM_5455 PF00563 EAL domain UNDYM_5455 PF00990 Diguanylate cyclase, GGDEF domain UNDYM_5455 PF03707 Bacterial signalling protein N terminal repeat UNDYM_5457 PF00486 Transcriptional regulatory protein, C terminal UNDYM_5457 PF00072 Response regulator receiver domain UNDYM_5458 PF00672 HAMP domain UNDYM_5458 PF00512 His Kinase A (phospho-acceptor) domain UNDYM_5458 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UNDYM_5461 PF13193 AMP-binding enzyme C-terminal domain UNDYM_5461 PF00501 AMP-binding enzyme UNDYM_5464 PF03061 Thioesterase superfamily UNDYM_5469 PF00672 HAMP domain UNDYM_5469 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UNDYM_5469 PF02203 Tar ligand binding domain homologue UNDYM_5472 PF00067 Cytochrome P450 UNDYM_5475 PF01361 Tautomerase enzyme UNDYM_5476 PF01979 Amidohydrolase family UNDYM_5478 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain UNDYM_5478 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase UNDYM_5479 PF01799 [2Fe-2S] binding domain UNDYM_5479 PF00111 2Fe-2S iron-sulfur cluster binding domain UNDYM_5481 PF13419 Haloacid dehalogenase-like hydrolase UNDYM_5484 PF00004 ATPase family associated with various cellular activities (AAA) UNDYM_5484 PF07724 AAA domain (Cdc48 subfamily) UNDYM_5484 PF17871 AAA lid domain UNDYM_5484 PF02861 Clp amino terminal domain, pathogenicity island component UNDYM_5484 PF10431 C-terminal, D2-small domain, of ClpB protein UNDYM_5486 PF00069 Protein kinase domain UNDYM_5486 PF03793 PASTA domain UNDYM_5489 PF01810 LysE type translocator UNDYM_5493 PF00132 Bacterial transferase hexapeptide (six repeats) UNDYM_5494 PF18074 Primosomal protein N C-terminal domain UNDYM_5494 PF17764 3′ DNA-binding domain (3′BD) UNDYM_5494 PF00270 DEAD/DEAH box helicase UNDYM_5494 PF00271 Helicase conserved C-terminal domain UNDYM_5494 PF18319 PriA DNA helicase Cys-rich region (CRR) domain UNDYM_5496 PF01208 Uroporphyrinogen decarboxylase (URO-D) UNDYM_5498 PF03976 Polyphosphate kinase 2 (PPK2) UNDYM_5503 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain UNDYM_5503 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain UNDYM_5504 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain UNDYM_5504 PF02874 ATP synthase alpha/beta family, beta-barrel domain UNDYM_5505 PF00231 ATP synthase UNDYM_5506 PF02874 ATP synthase alpha/beta family, beta-barrel domain UNDYM_5506 PF00306 ATP synthase alpha/beta chain, C terminal domain UNDYM_5506 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain UNDYM_5507 PF00213 ATP synthase delta (OSCP) subunit UNDYM_5508 PF00430 ATP synthase B/B' CF(0) UNDYM_5509 PF00137 ATP synthase subunit C UNDYM_5510 PF00119 ATP synthase A chain UNDYM_5513 PF02195 ParB-like nuclease domain UNDYM_5513 PF17762 HTH domain found in ParB protein UNDYM_5514 PF13614 AAA domain UNDYM_5515 PF02527 rRNA small subunit methyltransferase G UNDYM_5516 PF01134 Glucose inhibited division protein A UNDYM_5516 PF13932 GidA associated domain UNDYM_5517 PF01925 Sulfite exporter TauE/SafE UNDYM_5519 PF00465 Iron-containing alcohol dehydrogenase UNDYM_5520 PF00196 Bacterial regulatory proteins, luxR family UNDYM_5520 PF03472 Autoinducer binding domain UNDYM_5525 PF02653 Branched-chain amino acid transport system / permease component UNDYM_5526 PF02653 Branched-chain amino acid transport system / permease component UNDYM_5528 PF00005 ABC transporter UNDYM_5529 PF00005 ABC transporter UNDYM_5529 PF12399 Branched-chain amino acid ATP-binding cassette transporter UNDYM_5530 PF00732 GMC oxidoreductase UNDYM_5530 PF05199 GMC oxidoreductase UNDYM_5531 PF03060 Nitronate monooxygenase UNDYM_5532 PF00171 Aldehyde dehydrogenase family UNDYM_5533 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UNDYM_5533 PF03466 LysR substrate binding domain UNDYM_5536 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase UNDYM_5538 PF00370 FGGY family of carbohydrate kinases, N-terminal domain UNDYM_5538 PF02782 FGGY family of carbohydrate kinases, C-terminal domain UNDYM_5544 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase UNDYM_5544 PF03033 Glycosyltransferase family 28 N-terminal domain UNDYM_5546 PF07690 Major Facilitator Superfamily UNDYM_5547 PF00440 Bacterial regulatory proteins, tetR family UNDYM_5548 PF18327 Proline utilization A proline dehydrogenase N-terminal domain UNDYM_5548 PF01619 Proline dehydrogenase UNDYM_5548 PF14850 DNA-binding domain of Proline dehydrogenase UNDYM_5548 PF00171 Aldehyde dehydrogenase family UNDYM_5549 PF01037 Lrp/AsnC ligand binding domain UNDYM_5550 PF01810 LysE type translocator UNDYM_5552 PF00501 AMP-binding enzyme UNDYM_5554 PF02424 ApbE family UNDYM_5557 PF00578 AhpC/TSA family UNDYM_5558 PF02627 Carboxymuconolactone decarboxylase family UNDYM_5560 PF06580 Histidine kinase UNDYM_5560 PF07694 5TMR of 5TMR-LYT UNDYM_5561 PF04397 LytTr DNA-binding domain UNDYM_5561 PF00072 Response regulator receiver domain UNDYM_5564 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UNDYM_5564 PF06580 Histidine kinase UNDYM_5565 PF00072 Response regulator receiver domain UNDYM_5565 PF04397 LytTr DNA-binding domain UNDYM_5566 PF01965 DJ-1/PfpI family UNDYM_5566 PF12833 Helix-turn-helix domain UNDYM_5567 PF12833 Helix-turn-helix domain UNDYM_5567 PF01965 DJ-1/PfpI family UNDYM_5573 PF06832 Penicillin-Binding Protein C-terminus Family UNDYM_5573 PF00905 Penicillin binding protein transpeptidase domain UNDYM_5573 PF00912 Transglycosylase UNDYM_5574 PF11974 Bacterial alpha-2-macroglobulin MG3 domain UNDYM_5574 PF01835 MG2 domain UNDYM_5574 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain UNDYM_5574 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain UNDYM_5574 PF07703 Alpha-2-macroglobulin bait region domain UNDYM_5574 PF00207 Alpha-2-macroglobulin family UNDYM_5574 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain UNDYM_5574 PF17962 Bacterial macroglobulin domain 6 UNDYM_5578 PF00677 Lumazine binding domain UNDYM_5579 PF00989 PAS fold UNDYM_5579 PF00512 His Kinase A (phospho-acceptor) domain UNDYM_5579 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UNDYM_5580 PF03466 LysR substrate binding domain UNDYM_5580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UNDYM_5584 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain UNDYM_5584 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain UNDYM_5585 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain UNDYM_5585 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain UNDYM_5588 PF03707 Bacterial signalling protein N terminal repeat UNDYM_5588 PF00990 Diguanylate cyclase, GGDEF domain UNDYM_5588 PF00563 EAL domain UNDYM_5595 PF00155 Aminotransferase class I and II UNDYM_5597 PF08021 Siderophore-interacting FAD-binding domain UNDYM_5597 PF04954 Siderophore-interacting protein UNDYM_5598 PF03466 LysR substrate binding domain UNDYM_5598 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UNDYM_5599 PF13378 Enolase C-terminal domain-like UNDYM_5602 PF00155 Aminotransferase class I and II UNDYM_5603 PF13302 Acetyltransferase (GNAT) domain UNDYM_5605 PF00990 Diguanylate cyclase, GGDEF domain UNDYM_5605 PF03707 Bacterial signalling protein N terminal repeat UNDYM_5605 PF00563 EAL domain UNDYM_5606 PF03814 Potassium-transporting ATPase A subunit UNDYM_5608 PF02669 K+-transporting ATPase, c chain UNDYM_5609 PF02702 Osmosensitive K+ channel His kinase sensor domain UNDYM_5609 PF13492 GAF domain UNDYM_5609 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UNDYM_5609 PF00512 His Kinase A (phospho-acceptor) domain UNDYM_5609 PF13493 Domain of unknown function (DUF4118) UNDYM_5610 PF00072 Response regulator receiver domain UNDYM_5610 PF00486 Transcriptional regulatory protein, C terminal UNDYM_5614 PF00701 Dihydrodipicolinate synthetase family UNDYM_5616 PF00072 Response regulator receiver domain UNDYM_5616 PF09456 RcsC Alpha-Beta-Loop (ABL) UNDYM_5616 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UNDYM_5616 PF00512 His Kinase A (phospho-acceptor) domain UNDYM_5617 PF00005 ABC transporter UNDYM_5617 PF08402 TOBE domain UNDYM_5618 PF00528 Binding-protein-dependent transport system inner membrane component UNDYM_5622 PF02203 Tar ligand binding domain homologue UNDYM_5622 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UNDYM_5622 PF00672 HAMP domain UNDYM_5623 PF00486 Transcriptional regulatory protein, C terminal UNDYM_5623 PF00072 Response regulator receiver domain UNDYM_5624 PF08521 Two-component sensor kinase N-terminal UNDYM_5624 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UNDYM_5624 PF00512 His Kinase A (phospho-acceptor) domain UNDYM_5628 PF06969 HemN C-terminal domain UNDYM_5635 PF00704 Glycosyl hydrolases family 18 UNDYM_5636 PF04102 SlyX UNDYM_5638 PF07687 Peptidase dimerisation domain UNDYM_5638 PF01546 Peptidase family M20/M25/M40 UNDYM_5642 PF00576 HIUase/Transthyretin family UNDYM_5643 PF01546 Peptidase family M20/M25/M40 UNDYM_5643 PF07687 Peptidase dimerisation domain UNDYM_5644 PF00860 Permease family UNDYM_5645 PF01979 Amidohydrolase family UNDYM_5654 PF04397 LytTr DNA-binding domain UNDYM_5654 PF00072 Response regulator receiver domain UNDYM_5655 PF06580 Histidine kinase UNDYM_5655 PF02743 Cache domain UNDYM_5655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UNDYM_5655 PF00672 HAMP domain UNDYM_5657 PF03129 Anticodon binding domain UNDYM_5657 PF13393 Histidyl-tRNA synthetase UNDYM_5659 PF01752 Collagenase UNDYM_5659 PF08453 Peptidase family M9 N-terminal UNDYM_5661 PF02887 Pyruvate kinase, alpha/beta domain UNDYM_5661 PF00224 Pyruvate kinase, barrel domain UNDYM_5662 PF13660 Domain of unknown function (DUF4147) UNDYM_5662 PF05161 MOFRL family UNDYM_5663 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase UNDYM_5663 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase UNDYM_5664 PF01261 Xylose isomerase-like TIM barrel UNDYM_5665 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain UNDYM_5665 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain UNDYM_5665 PF00205 Thiamine pyrophosphate enzyme, central domain UNDYM_5666 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UNDYM_5666 PF03466 LysR substrate binding domain UNDYM_5667 PF00860 Permease family UNDYM_5668 PF00696 Amino acid kinase family UNDYM_5668 PF00583 Acetyltransferase (GNAT) family UNDYM_5672 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UNDYM_5672 PF03466 LysR substrate binding domain UNDYM_5675 PF00797 N-acetyltransferase UNDYM_5677 PF00270 DEAD/DEAH box helicase UNDYM_5677 PF00271 Helicase conserved C-terminal domain UNDYM_5677 PF03880 DbpA RNA binding domain UNDYM_5678 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) UNDYM_5678 PF08548 Peptidase M10 serralysin C terminal UNDYM_5678 PF00413 Matrixin UNDYM_5681 PF12833 Helix-turn-helix domain UNDYM_5682 PF00111 2Fe-2S iron-sulfur cluster binding domain UNDYM_5682 PF00175 Oxidoreductase NAD-binding domain UNDYM_5685 PF10459 Peptidase S46 UNDYM_5687 PF03707 Bacterial signalling protein N terminal repeat UNDYM_5687 PF00990 Diguanylate cyclase, GGDEF domain UNDYM_5687 PF00563 EAL domain UNDYM_5692 PF00072 Response regulator receiver domain UNDYM_5693 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UNDYM_5693 PF00989 PAS fold UNDYM_5693 PF00512 His Kinase A (phospho-acceptor) domain UNDYM_5694 PF00158 Sigma-54 interaction domain UNDYM_5694 PF00072 Response regulator receiver domain UNDYM_5694 PF02954 Bacterial regulatory protein, Fis family UNDYM_5695 PF00072 Response regulator receiver domain UNDYM_5696 PF13361 UvrD-like helicase C-terminal domain UNDYM_5696 PF00580 UvrD/REP helicase N-terminal domain UNDYM_5700 PF08548 Peptidase M10 serralysin C terminal UNDYM_5700 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) UNDYM_5708 PF00675 Insulinase (Peptidase family M16) UNDYM_5708 PF05193 Peptidase M16 inactive domain UNDYM_5710 PF04247 Invasion gene expression up-regulator, SirB UNDYM_5711 PF01425 Amidase UNDYM_5712 PF00732 GMC oxidoreductase UNDYM_5712 PF05199 GMC oxidoreductase UNDYM_5713 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term UNDYM_5713 PF12833 Helix-turn-helix domain UNDYM_5714 PF01497 Periplasmic binding protein UNDYM_5716 PF00512 His Kinase A (phospho-acceptor) domain UNDYM_5716 PF00672 HAMP domain UNDYM_5716 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UNDYM_5716 PF00989 PAS fold UNDYM_5718 PF11799 impB/mucB/samB family C-terminal domain UNDYM_5718 PF00817 impB/mucB/samB family UNDYM_5720 PF05193 Peptidase M16 inactive domain UNDYM_5720 PF00675 Insulinase (Peptidase family M16) UNDYM_5722 PF07715 TonB-dependent Receptor Plug Domain UNDYM_5722 PF00593 TonB dependent receptor UNDYM_5726 PF07715 TonB-dependent Receptor Plug Domain UNDYM_5726 PF00593 TonB dependent receptor UNDYM_5727 PF00672 HAMP domain UNDYM_5727 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UNDYM_5727 PF02203 Tar ligand binding domain homologue UNDYM_5729 PF07690 Major Facilitator Superfamily UNDYM_5731 PF12833 Helix-turn-helix domain UNDYM_5731 PF02311 AraC-like ligand binding domain UNDYM_5732 PF01432 Peptidase family M3 UNDYM_5734 PF07690 Major Facilitator Superfamily UNDYM_5735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UNDYM_5735 PF00512 His Kinase A (phospho-acceptor) domain UNDYM_5736 PF00730 HhH-GPD superfamily base excision DNA repair protein UNDYM_5736 PF02805 Metal binding domain of Ada UNDYM_5736 PF06029 AlkA N-terminal domain UNDYM_5736 PF12833 Helix-turn-helix domain UNDYM_5737 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain UNDYM_5737 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain UNDYM_5740 PF00884 Sulfatase UNDYM_5741 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UNDYM_5741 PF03466 LysR substrate binding domain UNDYM_5742 PF02803 Thiolase, C-terminal domain UNDYM_5742 PF00108 Thiolase, N-terminal domain UNDYM_5744 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD UNDYM_5745 PF00326 Prolyl oligopeptidase family UNDYM_5750 PF03466 LysR substrate binding domain UNDYM_5750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UNDYM_5753 PF00563 EAL domain UNDYM_5753 PF00990 Diguanylate cyclase, GGDEF domain UNDYM_5753 PF03707 Bacterial signalling protein N terminal repeat UNDYM_5754 PF01139 tRNA-splicing ligase RtcB UNDYM_5755 PF00854 POT family UNDYM_5758 PF00672 HAMP domain UNDYM_5758 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UNDYM_5758 PF02203 Tar ligand binding domain homologue UNDYM_5762 PF00486 Transcriptional regulatory protein, C terminal UNDYM_5762 PF00072 Response regulator receiver domain UNDYM_5764 PF02743 Cache domain UNDYM_5764 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UNDYM_5764 PF06580 Histidine kinase UNDYM_5764 PF00672 HAMP domain UNDYM_5765 PF00072 Response regulator receiver domain UNDYM_5765 PF04397 LytTr DNA-binding domain UNDYM_5766 PF01026 TatD related DNase UNDYM_5772 PF02129 X-Pro dipeptidyl-peptidase (S15 family) UNDYM_5772 PF09168 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal UNDYM_5772 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain UNDYM_5776 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle UNDYM_5781 PF00141 Peroxidase UNDYM_5784 PF01047 MarR family UNDYM_5786 PF00069 Protein kinase domain UNDYM_5789 PF00696 Amino acid kinase family UNDYM_5789 PF01842 ACT domain UNDYM_5789 PF13840 ACT domain UNDYM_5789 PF00742 Homoserine dehydrogenase UNDYM_5789 PF03447 Homoserine dehydrogenase, NAD binding domain UNDYM_5790 PF16925 Tetracyclin repressor-like, C-terminal domain UNDYM_5790 PF00440 Bacterial regulatory proteins, tetR family UNDYM_5791 PF00724 NADH:flavin oxidoreductase / NADH oxidase family UNDYM_5792 PF03009 Glycerophosphoryl diester phosphodiesterase family UNDYM_5794 PF00528 Binding-protein-dependent transport system inner membrane component UNDYM_5796 PF00486 Transcriptional regulatory protein, C terminal UNDYM_5796 PF00072 Response regulator receiver domain UNDYM_5797 PF00672 HAMP domain UNDYM_5797 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UNDYM_5797 PF00512 His Kinase A (phospho-acceptor) domain UNDYM_5800 PF07690 Major Facilitator Superfamily UNDYM_5802 PF13421 SPFH domain-Band 7 family UNDYM_5804 PF02463 RecF/RecN/SMC N terminal domain UNDYM_5806 PF04337 Protein of unknown function, DUF480 UNDYM_5807 PF00563 EAL domain UNDYM_5807 PF03707 Bacterial signalling protein N terminal repeat UNDYM_5807 PF00990 Diguanylate cyclase, GGDEF domain UNDYM_5812 PF00686 Starch binding domain UNDYM_5812 PF02806 Alpha amylase, C-terminal all-beta domain UNDYM_5812 PF00128 Alpha amylase, catalytic domain UNDYM_5813 PF00128 Alpha amylase, catalytic domain UNDYM_5818 PF10127 RNA repair pathway DNA polymerase beta family UNDYM_5819 PF00296 Luciferase-like monooxygenase UNDYM_5820 PF00873 AcrB/AcrD/AcrF family UNDYM_5821 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion UNDYM_5822 PF04397 LytTr DNA-binding domain UNDYM_5822 PF00072 Response regulator receiver domain UNDYM_5823 PF06580 Histidine kinase UNDYM_5823 PF13492 GAF domain UNDYM_5823 PF07694 5TMR of 5TMR-LYT UNDYM_5823 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UNDYM_5831 PF01551 Peptidase family M23 UNDYM_5831 PF01476 LysM domain UNDYM_5831 PF08525 Opacity-associated protein A N-terminal motif UNDYM_5833 PF01451 Low molecular weight phosphotyrosine protein phosphatase UNDYM_5838 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase UNDYM_5839 PF00111 2Fe-2S iron-sulfur cluster binding domain UNDYM_5839 PF01799 [2Fe-2S] binding domain UNDYM_5840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UNDYM_5840 PF06580 Histidine kinase UNDYM_5840 PF07694 5TMR of 5TMR-LYT UNDYM_5841 PF04397 LytTr DNA-binding domain UNDYM_5841 PF00072 Response regulator receiver domain UNDYM_5842 PF01431 Peptidase family M13 UNDYM_5842 PF05649 Peptidase family M13 UNDYM_5845 PF05088 Bacterial NAD-glutamate dehydrogenase UNDYM_5846 PF05088 Bacterial NAD-glutamate dehydrogenase UNDYM_5849 PF02225 PA domain UNDYM_5849 PF04389 Peptidase family M28 UNDYM_5854 PF01833 IPT/TIG domain UNDYM_5854 PF00128 Alpha amylase, catalytic domain UNDYM_5854 PF00686 Starch binding domain UNDYM_5854 PF02806 Alpha amylase, C-terminal all-beta domain UNDYM_5855 PF00440 Bacterial regulatory proteins, tetR family UNDYM_5856 PF00248 Aldo/keto reductase family UNDYM_5857 PF00271 Helicase conserved C-terminal domain UNDYM_5857 PF03880 DbpA RNA binding domain UNDYM_5857 PF00270 DEAD/DEAH box helicase UNDYM_5859 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UNDYM_5859 PF03466 LysR substrate binding domain UNDYM_5860 PF01435 Peptidase family M48 UNDYM_5864 PF01494 FAD binding domain UNDYM_5868 PF00875 DNA photolyase UNDYM_5868 PF03441 FAD binding domain of DNA photolyase UNDYM_5869 PF03441 FAD binding domain of DNA photolyase UNDYM_5869 PF00875 DNA photolyase UNDYM_5870 PF08212 Lipocalin-like domain UNDYM_5873 PF00392 Bacterial regulatory proteins, gntR family UNDYM_5873 PF00155 Aminotransferase class I and II UNDYM_5877 PF00004 ATPase family associated with various cellular activities (AAA) UNDYM_5878 PF00082 Subtilase family UNDYM_5880 PF00348 Polyprenyl synthetase UNDYM_5881 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UNDYM_5881 PF02203 Tar ligand binding domain homologue UNDYM_5881 PF00672 HAMP domain UNDYM_5882 PF00672 HAMP domain UNDYM_5882 PF02203 Tar ligand binding domain homologue UNDYM_5882 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UNDYM_5887 PF00512 His Kinase A (phospho-acceptor) domain UNDYM_5887 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UNDYM_5887 PF00497 Bacterial extracellular solute-binding proteins, family 3 UNDYM_5889 PF00144 Beta-lactamase UNDYM_5896 PF02608 ABC transporter substrate-binding protein PnrA-like UNDYM_5897 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UNDYM_5897 PF03466 LysR substrate binding domain UNDYM_5898 PF13230 Glutamine amidotransferases class-II UNDYM_5901 PF00067 Cytochrome P450 UNDYM_5904 PF12631 MnmE helical domain UNDYM_5904 PF10396 GTP-binding protein TrmE N-terminus UNDYM_5904 PF01926 50S ribosome-binding GTPase UNDYM_5905 PF02096 60Kd inner membrane protein UNDYM_5905 PF14849 YidC periplasmic domain UNDYM_5906 PF00825 Ribonuclease P UNDYM_5907 PF00468 Ribosomal protein L34 UNDYM_5909 PF17762 HTH domain found in ParB protein UNDYM_5909 PF02195 ParB-like nuclease domain UNDYM_5911 PF13007 Transposase C of IS166 homeodomain UNDYM_5911 PF13817 IS66 C-terminal element UNDYM_5911 PF03050 Transposase IS66 family UNDYM_5911 PF13005 zinc-finger binding domain of transposase IS66 UNDYM_5929 PF13005 zinc-finger binding domain of transposase IS66 UNDYM_5929 PF03050 Transposase IS66 family UNDYM_5929 PF13817 IS66 C-terminal element UNDYM_5929 PF13007 Transposase C of IS166 homeodomain UNDYM_5950 PF13610 DDE domain UNDYM_5951 PF00665 Integrase core domain UNDYM_5953 PF07804 HipA-like C-terminal domain UNDYM_5953 PF13657 HipA N-terminal domain UNDYM_5954 PF13700 Domain of unknown function (DUF4158) UNDYM_5954 PF01526 Tn3 transposase DDE domain UNDYM_5956 PF00724 NADH:flavin oxidoreductase / NADH oxidase family UNDYM_5956 PF07992 Pyridine nucleotide-disulphide oxidoreductase UNDYM_5957 PF13610 DDE domain UNDYM_5959 PF01209 ubiE/COQ5 methyltransferase family UNDYM_5976 PF01411 tRNA synthetases class II (A) UNDYM_5976 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain UNDYM_5976 PF02272 DHHA1 domain UNDYM_5981 PF04545 Sigma-70, region 4 UNDYM_5981 PF04542 Sigma-70 region 2 UNDYM_5981 PF00140 Sigma-70 factor, region 1.2 UNDYM_5981 PF03979 Sigma-70 factor, region 1.1 UNDYM_5981 PF04539 Sigma-70 region 3 UNDYM_5982 PF00813 FliP family UNDYM_5984 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term UNDYM_5986 PF06429 Flagellar basal body rod FlgEFG protein C-terminal UNDYM_5986 PF07559 Flagellar basal body protein FlaE UNDYM_5986 PF00460 Flagella basal body rod protein UNDYM_5987 PF03963 Flagellar hook capping protein - N-terminal region UNDYM_5990 PF18269 T3SS EscN ATPase C-terminal domain UNDYM_5990 PF02874 ATP synthase alpha/beta family, beta-barrel domain UNDYM_5990 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain UNDYM_5992 PF01514 Secretory protein of YscJ/FliF family UNDYM_5992 PF08345 Flagellar M-ring protein C-terminal UNDYM_5993 PF02049 Flagellar hook-basal body complex protein FliE UNDYM_5994 PF06429 Flagellar basal body rod FlgEFG protein C-terminal UNDYM_5994 PF00460 Flagella basal body rod protein UNDYM_5995 PF00460 Flagella basal body rod protein UNDYM_5996 PF02119 Flagellar P-ring protein UNDYM_5997 PF02119 Flagellar P-ring protein UNDYM_5998 PF02107 Flagellar L-ring protein UNDYM_6000 PF06429 Flagellar basal body rod FlgEFG protein C-terminal UNDYM_6000 PF00460 Flagella basal body rod protein UNDYM_6001 PF07559 Flagellar basal body protein FlaE UNDYM_6001 PF06429 Flagellar basal body rod FlgEFG protein C-terminal UNDYM_6002 PF00771 FHIPEP family UNDYM_6003 PF01312 FlhB HrpN YscU SpaS Family UNDYM_6004 PF01311 Bacterial export proteins, family 1 UNDYM_6005 PF01313 Bacterial export proteins, family 3 UNDYM_6022 PF13657 HipA N-terminal domain UNDYM_6022 PF07804 HipA-like C-terminal domain UNDYM_t007 PF01121 Dephospho-CoA kinase