locus-tag	class	description
UNDYM_0001	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
UNDYM_0007	COG0740	serine-type endopeptidase activity
UNDYM_0008	COG1473	amidohydrolase
UNDYM_0010	COG0601	transmembrane transport
UNDYM_0011	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
UNDYM_0012	COG0444	Belongs to the ABC transporter superfamily
UNDYM_0013	COG4608	Belongs to the ABC transporter superfamily
UNDYM_0015	COG2312	Erythromycin esterase
UNDYM_0018	COG3739	integral membrane protein
UNDYM_0021	COG1595	DNA-templated transcription, initiation
UNDYM_0022	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
UNDYM_0024	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
UNDYM_0031	COG4977	sequence-specific DNA binding
UNDYM_0031	COG1917	Cupin 2, conserved barrel domain protein
UNDYM_0032	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
UNDYM_0032	COG2022	thiamine diphosphate biosynthetic process
UNDYM_0033	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
UNDYM_0036	COG2204	response regulator
UNDYM_0037	COG5000	phosphorelay sensor kinase activity
UNDYM_0040	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
UNDYM_0040	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
UNDYM_0041	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
UNDYM_0042	COG2267	carboxylic ester hydrolase activity
UNDYM_0047	COG5002	protein histidine kinase activity
UNDYM_0051	COG0606	chelatase, subunit chli
UNDYM_0054	COG0347	Belongs to the P(II) protein family
UNDYM_0056	COG0004	ammonium transporteR
UNDYM_0061	COG5002	protein histidine kinase activity
UNDYM_0061	COG5001	Diguanylate cyclase
UNDYM_0063	COG2008	Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde
UNDYM_0081	COG0515	serine threonine protein kinase
UNDYM_0081	COG2815	serine threonine protein kinase
UNDYM_0082	COG1739	Uncharacterized protein family UPF0029
UNDYM_0083	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
UNDYM_0085	COG0813	purine-nucleoside phosphorylase activity
UNDYM_0087	COG0488	(ABC) transporter
UNDYM_0088	COG3047	cAMP biosynthetic process
UNDYM_0090	COG1136	(ABC) transporter
UNDYM_0091	COG1136	(ABC) transporter
UNDYM_0091	COG0577	efflux transmembrane transporter activity
UNDYM_0092	COG0577	efflux transmembrane transporter activity
UNDYM_0092	COG1136	(ABC) transporter
UNDYM_0093	COG2204	response regulator
UNDYM_0094	COG5000	phosphorelay sensor kinase activity
UNDYM_0097	COG0006	proline dipeptidase activity
UNDYM_0099	COG4771	TonB-dependent receptor
UNDYM_0102	COG0631	protein serine/threonine phosphatase activity
UNDYM_0103	COG0515	serine threonine protein kinase
UNDYM_0106	COG4206	TonB-dependent receptor
UNDYM_0107	COG3291	Pkd domain containing protein
UNDYM_0114	COG3300	MHYT domain
UNDYM_0114	COG5001	Diguanylate cyclase
UNDYM_0117	COG3706	GGDEF domain
UNDYM_0119	COG1522	sequence-specific DNA binding
UNDYM_0121	COG3275	phosphorelay sensor kinase activity
UNDYM_0122	COG3279	Response regulator of the LytR AlgR family
UNDYM_0126	COG0583	DNA-binding transcription factor activity
UNDYM_0127	COG1653	transport
UNDYM_0130	COG3842	ATPase activity
UNDYM_0131	COG1609	Transcriptional regulator
UNDYM_0132	COG2723	6-phospho-beta-galactosidase activity
UNDYM_0133	COG4771	TonB-dependent receptor
UNDYM_0135	COG1472	Belongs to the glycosyl hydrolase 3 family
UNDYM_0140	COG1703	isobutyryl-CoA mutase activity
UNDYM_0140	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
UNDYM_0140	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
UNDYM_0149	COG2205	protein histidine kinase activity
UNDYM_0149	COG0784	Response regulator, receiver
UNDYM_0150	COG2824	Alkylphosphonate utilization operon protein PhnA
UNDYM_0155	COG1477	protein flavinylation
UNDYM_0159	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
UNDYM_0168	COG1522	sequence-specific DNA binding
UNDYM_0171	COG0596	Alpha beta hydrolase
UNDYM_0172	COG3493	citrate carrier protein
UNDYM_0173	COG0066	3-isopropylmalate dehydratase activity
UNDYM_0174	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
UNDYM_0175	COG0583	DNA-binding transcription factor activity
UNDYM_0180	COG1944	ATP diphosphatase activity
UNDYM_0181	COG0024	Methionine aminopeptidase
UNDYM_0184	COG2197	response regulator
UNDYM_0185	COG4585	Histidine kinase
UNDYM_0187	COG3706	GGDEF domain
UNDYM_0188	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
UNDYM_0197	COG0583	DNA-binding transcription factor activity
UNDYM_0204	COG5002	protein histidine kinase activity
UNDYM_0207	COG1045	serine acetyltransferase
UNDYM_0208	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
UNDYM_0209	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
UNDYM_0210	COG1309	transcriptional regulator
UNDYM_0211	COG2267	carboxylic ester hydrolase activity
UNDYM_0219	COG1859	Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP- ribose 1''-2''-cyclic phosphate (APPR P). May function as an ADP- ribosylase
UNDYM_0222	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
UNDYM_0223	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
UNDYM_0223	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
UNDYM_0224	COG1051	belongs to the nudix hydrolase family
UNDYM_0224	COG1056	cytidyltransferase-related domain
UNDYM_0226	COG0642	Histidine kinase
UNDYM_0227	COG0745	RESPONSE REGULATOR receiver
UNDYM_0228	COG1969	Ni Fe-hydrogenase, b-type cytochrome subunit
UNDYM_0229	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
UNDYM_0230	COG2721	sulfolactate sulfo-lyase activity
UNDYM_0231	COG2186	Transcriptional regulator
UNDYM_0232	COG4206	TonB-dependent receptor
UNDYM_0237	COG2271	Major facilitator Superfamily
UNDYM_0240	COG2186	Transcriptional regulator
UNDYM_0244	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
UNDYM_0246	COG0004	ammonium transporteR
UNDYM_0250	COG2070	2-Nitropropane dioxygenase
UNDYM_0251	COG3129	Specifically methylates the adenine in position 1618 of 23S rRNA
UNDYM_0253	COG1522	sequence-specific DNA binding
UNDYM_0255	COG0789	Transcriptional regulator
UNDYM_0257	COG0745	RESPONSE REGULATOR receiver
UNDYM_0258	COG2205	protein histidine kinase activity
UNDYM_0260	COG1435	thymidine kinase activity
UNDYM_0261	COG0071	Belongs to the small heat shock protein (HSP20) family
UNDYM_0265	COG3508	Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate
UNDYM_0269	COG0583	DNA-binding transcription factor activity
UNDYM_0273	COG0411	ABC transporter
UNDYM_0278	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
UNDYM_0281	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
UNDYM_0284	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
UNDYM_0285	COG3221	ABC-type phosphate phosphonate transport system periplasmic component
UNDYM_0286	COG3639	organic phosphonate transmembrane transporter activity
UNDYM_0288	COG3709	Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP)
UNDYM_0289	COG3454	Phosphonate metabolism
UNDYM_0290	COG3624	Phosphonate C-P lyase system protein PhnG
UNDYM_0291	COG3625	alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase activity
UNDYM_0292	COG3626	phosphonate metabolism
UNDYM_0293	COG3627	carbon phosphorus lyase activity
UNDYM_0294	COG4107	phosphonate C-P lyase system protein PhnK
UNDYM_0295	COG4778	phosphonate C-P lyase system protein PhnL
UNDYM_0296	COG3454	Phosphonate metabolism
UNDYM_0297	COG0037	tRNA processing
UNDYM_0299	COG1028	Short-chain dehydrogenase reductase Sdr
UNDYM_0304	COG1280	lysine exporter protein (LysE YggA)
UNDYM_0307	COG1393	Belongs to the ArsC family
UNDYM_0308	COG2119	membrane
UNDYM_0311	COG1309	transcriptional regulator
UNDYM_0312	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
UNDYM_0315	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
UNDYM_0316	COG0081	regulation of translation
UNDYM_0317	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
UNDYM_0318	COG0222	ribosome binding
UNDYM_0319	COG0085	RNA polymerase activity
UNDYM_0320	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
UNDYM_0321	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
UNDYM_0321	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
UNDYM_0322	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
UNDYM_0326	COG1414	Transcriptional regulator
UNDYM_0328	COG0402	S-adenosylhomocysteine deaminase activity
UNDYM_0334	COG0019	diaminopimelate decarboxylase activity
UNDYM_0335	COG1522	sequence-specific DNA binding
UNDYM_0337	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
UNDYM_0338	COG0431	NADPH-dependent FMN reductase
UNDYM_0339	COG5581	Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)- dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility
UNDYM_0340	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
UNDYM_0344	COG1686	Belongs to the peptidase S11 family
UNDYM_0351	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
UNDYM_0352	COG4977	sequence-specific DNA binding
UNDYM_0356	COG1253	flavin adenine dinucleotide binding
UNDYM_0358	COG0205	6-phosphofructokinase activity
UNDYM_0362	COG0640	Transcriptional regulator
UNDYM_0369	COG1802	Transcriptional regulator
UNDYM_0370	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
UNDYM_0374	COG3052	prosthetic group binding
UNDYM_0378	COG1767	triphosphoribosyl-dephospho-CoA synthase activity
UNDYM_0381	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
UNDYM_0385	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
UNDYM_0397	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
UNDYM_0398	COG0321	lipoyl(octanoyl) transferase activity
UNDYM_0400	COG1335	isochorismatase
UNDYM_0402	COG0583	DNA-binding transcription factor activity
UNDYM_0403	COG2921	Belongs to the UPF0250 family
UNDYM_0404	COG0583	DNA-binding transcription factor activity
UNDYM_0407	COG1686	Belongs to the peptidase S11 family
UNDYM_0408	COG2945	thiolester hydrolase activity
UNDYM_0413	COG1127	ABC transporter
UNDYM_0414	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
UNDYM_0415	COG2194	sulfuric ester hydrolase activity
UNDYM_0416	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
UNDYM_0417	COG0049	tRNA binding
UNDYM_0418	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
UNDYM_0419	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
UNDYM_0420	COG0051	transcription antitermination factor activity, RNA binding
UNDYM_0421	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
UNDYM_0422	COG0088	Forms part of the polypeptide exit tunnel
UNDYM_0423	COG0089	rRNA binding
UNDYM_0424	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
UNDYM_0425	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
UNDYM_0426	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
UNDYM_0427	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
UNDYM_0428	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
UNDYM_0429	COG0255	Belongs to the universal ribosomal protein uL29 family
UNDYM_0431	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
UNDYM_0432	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
UNDYM_0433	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
UNDYM_0434	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
UNDYM_0435	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
UNDYM_0436	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
UNDYM_0437	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
UNDYM_0438	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
UNDYM_0439	COG1841	ribosomal large subunit assembly
UNDYM_0440	COG0200	Binds to the 23S rRNA
UNDYM_0441	COG0201	protein transport
UNDYM_0442	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
UNDYM_0443	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
UNDYM_0444	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
UNDYM_0445	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
UNDYM_0446	COG0202	RNA polymerase activity
UNDYM_0447	COG0203	ribosomal protein L17
UNDYM_0449	COG4232	protein-disulfide reductase activity
UNDYM_0450	COG0450	alkyl hydroperoxide reductase
UNDYM_0451	COG2925	Exonuclease
UNDYM_0452	COG0598	Magnesium transport protein CorA
UNDYM_0456	COG0218	Necessary for normal cell division and for the maintenance of normal septation
UNDYM_0458	COG1333	cytochrome c biogenesis protein
UNDYM_0459	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
UNDYM_0460	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
UNDYM_0461	COG2717	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain
UNDYM_0463	COG1965	Belongs to the frataxin family
UNDYM_0472	COG0232	Belongs to the dGTPase family. Type 2 subfamily
UNDYM_0480	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
UNDYM_0481	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
UNDYM_0482	COG1137	ATPase activity
UNDYM_0485	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
UNDYM_0488	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
UNDYM_0490	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
UNDYM_0491	COG1950	PFAM Membrane protein of
UNDYM_0496	COG1522	sequence-specific DNA binding
UNDYM_0497	COG0626	cystathionine gamma-synthase activity
UNDYM_0501	COG1132	(ABC) transporter
UNDYM_0502	COG1132	(ABC) transporter
UNDYM_0504	COG2770	Histidine kinase
UNDYM_0504	COG2208	phosphoserine phosphatase activity
UNDYM_0508	COG1505	serine-type exopeptidase activity
UNDYM_0509	COG2205	protein histidine kinase activity
UNDYM_0521	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
UNDYM_0525	COG1335	isochorismatase
UNDYM_0527	COG4452	Inner membrane protein CreD
UNDYM_0528	COG2205	protein histidine kinase activity
UNDYM_0529	COG0745	RESPONSE REGULATOR receiver
UNDYM_0530	COG0295	cytidine deaminase activity
UNDYM_0539	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
UNDYM_0549	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
UNDYM_0550	COG2313	pseudouridylate synthase activity
UNDYM_0561	COG5507	3-demethylubiquinone-9 3-methyltransferase
UNDYM_0563	COG0583	DNA-binding transcription factor activity
UNDYM_0567	COG0583	DNA-binding transcription factor activity
UNDYM_0570	COG0583	DNA-binding transcription factor activity
UNDYM_0572	COG2129	metallophosphoesterase
UNDYM_0587	COG2304	oxidoreductase activity
UNDYM_0594	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
UNDYM_0595	COG2137	regulation of response to DNA damage stimulus
UNDYM_0597	COG0045	succinate-CoA ligase (ADP-forming) activity
UNDYM_0598	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
UNDYM_0602	COG4969	Belongs to the N-Me-Phe pilin family
UNDYM_0603	COG4969	Belongs to the N-Me-Phe pilin family
UNDYM_0606	COG4969	Belongs to the N-Me-Phe pilin family
UNDYM_0607	COG0405	Gamma-glutamyltransferase
UNDYM_0608	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
UNDYM_0609	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
UNDYM_0610	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
UNDYM_0611	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
UNDYM_0613	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
UNDYM_0618	COG4555	ABC transporter
UNDYM_0619	COG1668	transmembrane transport
UNDYM_0622	COG0519	Catalyzes the synthesis of GMP from XMP
UNDYM_0629	COG2308	Evidence 4 Homologs of previously reported genes of
UNDYM_0632	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
UNDYM_0635	COG0617	tRNA 3'-terminal CCA addition
UNDYM_0637	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
UNDYM_0638	COG0628	permease
UNDYM_0647	COG1660	Displays ATPase and GTPase activities
UNDYM_0648	COG1493	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
UNDYM_0650	COG5001	Diguanylate cyclase
UNDYM_0650	COG3300	MHYT domain
UNDYM_0652	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
UNDYM_0652	COG2904	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
UNDYM_0653	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
UNDYM_0654	COG1238	metal cluster binding
UNDYM_0658	COG4221	oxidoreductase activity
UNDYM_0663	COG2130	NADP-dependent
UNDYM_0664	COG0583	DNA-binding transcription factor activity
UNDYM_0666	COG2226	methyltransferase
UNDYM_0669	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
UNDYM_0672	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
UNDYM_0680	COG2972	Histidine kinase
UNDYM_0690	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
UNDYM_0692	COG1522	sequence-specific DNA binding
UNDYM_0693	COG1280	lysine exporter protein (LysE YggA)
UNDYM_0700	COG0420	3'-5' exonuclease activity
UNDYM_0705	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
UNDYM_0708	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
UNDYM_0711	COG0494	nUDIX hydrolase
UNDYM_0712	COG3568	Endonuclease Exonuclease Phosphatase
UNDYM_0713	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
UNDYM_0723	COG1960	acyl-CoA dehydrogenase activity
UNDYM_0724	COG1250	3-hydroxyacyl-CoA dehydrogenase
UNDYM_0724	COG1024	Enoyl-CoA hydratase
UNDYM_0725	COG0183	Belongs to the thiolase family
UNDYM_0727	COG1024	Enoyl-CoA hydratase
UNDYM_0728	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
UNDYM_0729	COG0251	oxidation-reduction process
UNDYM_0731	COG2211	Major facilitator Superfamily
UNDYM_0733	COG1309	transcriptional regulator
UNDYM_0734	COG4948	Mandelate Racemase Muconate Lactonizing
UNDYM_0735	COG4771	TonB-dependent receptor
UNDYM_0738	COG0179	Fumarylacetoacetate (FAA) hydrolase
UNDYM_0739	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
UNDYM_0740	COG0318	PFAM AMP-dependent synthetase and ligase
UNDYM_0744	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
UNDYM_0745	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
UNDYM_0746	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
UNDYM_0748	COG4716	Myosin-crossreactive antigen
UNDYM_0751	COG3459	Glycosyltransferase 36 associated
UNDYM_0754	COG2823	Periplasmic or secreted lipoprotein
UNDYM_0756	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
UNDYM_0757	COG1063	alcohol dehydrogenase
UNDYM_0769	COG4650	regulator
UNDYM_0772	COG1690	Belongs to the RtcB family
UNDYM_0773	COG0430	RNA-3'-phosphate cyclase activity
UNDYM_0775	COG1690	Belongs to the RtcB family
UNDYM_0781	COG2001	Belongs to the MraZ family
UNDYM_0782	COG0275	rRNA processing
UNDYM_0785	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
UNDYM_0786	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
UNDYM_0787	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
UNDYM_0790	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
UNDYM_0791	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
UNDYM_0792	COG1181	Belongs to the D-alanine--D-alanine ligase family
UNDYM_0793	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
UNDYM_0795	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
UNDYM_0796	COG0678	peroxiredoxin activity
UNDYM_0798	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
UNDYM_0800	COG0741	lytic transglycosylase activity
UNDYM_0800	COG1196	nuclear chromosome segregation
UNDYM_0800	COG0739	heme binding
UNDYM_0801	COG0653	protein targeting
UNDYM_0802	COG1960	acyl-CoA dehydrogenase activity
UNDYM_0803	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
UNDYM_0807	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
UNDYM_0808	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
UNDYM_0811	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
UNDYM_0812	COG4582	Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity
UNDYM_0816	COG0142	geranyltranstransferase activity
UNDYM_0817	COG0261	This protein binds to 23S rRNA in the presence of protein L20
UNDYM_0818	COG0211	Belongs to the bacterial ribosomal protein bL27 family
UNDYM_0819	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
UNDYM_0820	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
UNDYM_0822	COG0494	nUDIX hydrolase
UNDYM_0823	COG0442	prolyl-tRNA aminoacylation
UNDYM_0824	COG0741	lytic transglycosylase activity
UNDYM_0829	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
UNDYM_0831	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
UNDYM_0832	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
UNDYM_0833	COG1116	anion transmembrane transporter activity
UNDYM_0835	COG4191	Histidine kinase
UNDYM_0836	COG2204	response regulator
UNDYM_0841	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
UNDYM_0841	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
UNDYM_0844	COG0762	integral membrane protein
UNDYM_0845	COG1609	Transcriptional regulator
UNDYM_0846	COG0402	S-adenosylhomocysteine deaminase activity
UNDYM_0847	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
UNDYM_0848	COG0351	phosphomethylpyrimidine kinase
UNDYM_0849	COG1773	rubredoxin
UNDYM_0853	COG0840	transmembrane signaling receptor activity
UNDYM_0854	COG2198	Histidine kinase
UNDYM_0854	COG0643	Histidine kinase
UNDYM_0854	COG2198	Histidine kinase
UNDYM_0854	COG0643	Histidine kinase
UNDYM_0855	COG0415	Belongs to the DNA photolyase family
UNDYM_0856	COG1678	Uncharacterized ACR, COG1678
UNDYM_0857	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
UNDYM_0858	COG2065	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
UNDYM_0859	COG0540	Belongs to the ATCase OTCase family
UNDYM_0863	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
UNDYM_0864	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
UNDYM_0865	COG0497	DNA recombination
UNDYM_0867	COG0546	phosphoglycolate phosphatase activity
UNDYM_0868	COG1420	regulation of RNA biosynthetic process
UNDYM_0869	COG1420	regulation of RNA biosynthetic process
UNDYM_0871	COG0735	belongs to the Fur family
UNDYM_0873	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
UNDYM_0874	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
UNDYM_0877	COG0495	leucyl-tRNA aminoacylation
UNDYM_0880	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
UNDYM_0884	COG2814	Major facilitator Superfamily
UNDYM_0886	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
UNDYM_0888	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
UNDYM_0890	COG1765	OsmC-like protein
UNDYM_0891	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
UNDYM_0892	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
UNDYM_0893	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
UNDYM_0896	COG0316	Belongs to the HesB IscA family
UNDYM_0898	COG0277	FAD linked oxidase domain protein
UNDYM_0899	COG0277	FAD linked oxidase domain protein
UNDYM_0900	COG0247	lactate metabolic process
UNDYM_0901	COG0386	Belongs to the glutathione peroxidase family
UNDYM_0909	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
UNDYM_0911	COG1175	transmembrane transport
UNDYM_0912	COG0395	ABC-type sugar transport system, permease component
UNDYM_0916	COG1752	Esterase of the alpha-beta hydrolase superfamily
UNDYM_0917	COG1752	Esterase of the alpha-beta hydrolase superfamily
UNDYM_0918	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
UNDYM_0919	COG0583	DNA-binding transcription factor activity
UNDYM_0920	COG1028	Short-chain dehydrogenase reductase Sdr
UNDYM_0922	COG0456	acetyltransferase
UNDYM_0922	COG1846	Transcriptional regulator
UNDYM_0923	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
UNDYM_0924	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
UNDYM_0925	COG0343	queuine tRNA-ribosyltransferase activity
UNDYM_0928	COG1862	Preprotein translocase
UNDYM_0929	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
UNDYM_0930	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
UNDYM_0931	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
UNDYM_0933	COG1846	Transcriptional regulator
UNDYM_0934	COG2353	YceI-like domain
UNDYM_0936	COG3038	cytochrome b561
UNDYM_0939	COG0625	glutathione transferase activity
UNDYM_0950	COG0688	phosphatidylethanolamine metabolic process
UNDYM_0953	COG0450	alkyl hydroperoxide reductase
UNDYM_0954	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
UNDYM_0957	COG1446	asparaginase
UNDYM_0959	COG0482	sulfurtransferase activity
UNDYM_0962	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
UNDYM_0970	COG0789	Transcriptional regulator
UNDYM_0972	COG1309	transcriptional regulator
UNDYM_0976	COG2423	ornithine cyclodeaminase activity
UNDYM_0977	COG1522	sequence-specific DNA binding
UNDYM_0979	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
UNDYM_0979	COG2199	diguanylate cyclase activity
UNDYM_0980	COG1280	lysine exporter protein (LysE YggA)
UNDYM_0983	COG4567	Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain
UNDYM_0986	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
UNDYM_0987	COG1845	cytochrome c oxidase, subunit III
UNDYM_0988	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
UNDYM_0989	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
UNDYM_0990	COG0477	Major facilitator Superfamily
UNDYM_0993	COG2197	response regulator
UNDYM_0994	COG4585	Histidine kinase
UNDYM_0996	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
UNDYM_0997	COG0006	proline dipeptidase activity
UNDYM_0998	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
UNDYM_1000	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
UNDYM_1001	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
UNDYM_1002	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
UNDYM_1003	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
UNDYM_1004	COG2201	protein-glutamate methylesterase activity
UNDYM_1005	COG0166	Belongs to the GPI family
UNDYM_1009	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
UNDYM_1012	COG3135	benzoate transporter
UNDYM_1013	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
UNDYM_1025	COG0644	oxidoreductase
UNDYM_1027	COG0626	cystathionine gamma-synthase activity
UNDYM_1028	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
UNDYM_1030	COG2723	6-phospho-beta-galactosidase activity
UNDYM_1033	COG4771	TonB-dependent receptor
UNDYM_1037	COG1609	Transcriptional regulator
UNDYM_1039	COG1309	transcriptional regulator
UNDYM_1042	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
UNDYM_1044	COG1538	Outer membrane efflux protein
UNDYM_1047	COG1136	(ABC) transporter
UNDYM_1050	COG4206	TonB-dependent receptor
UNDYM_1051	COG4206	TonB-dependent receptor
UNDYM_1058	COG0366	Alpha amylase catalytic
UNDYM_1059	COG1501	Belongs to the glycosyl hydrolase 31 family
UNDYM_1060	COG0837	glucose binding
UNDYM_1060	COG1737	Transcriptional regulator
UNDYM_1066	COG0583	DNA-binding transcription factor activity
UNDYM_1068	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
UNDYM_1069	COG0346	lactoylglutathione lyase activity
UNDYM_1078	COG0366	Alpha amylase catalytic
UNDYM_1080	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
UNDYM_1083	COG0640	Transcriptional regulator
UNDYM_1085	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
UNDYM_1089	COG2823	Periplasmic or secreted lipoprotein
UNDYM_1091	COG0628	permease
UNDYM_1096	COG2197	response regulator
UNDYM_1103	COG1704	LemA family
UNDYM_1104	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
UNDYM_1106	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
UNDYM_1113	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
UNDYM_1114	COG2814	Major facilitator Superfamily
UNDYM_1115	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
UNDYM_1116	COG0586	Pfam SNARE associated Golgi protein
UNDYM_1118	COG1280	lysine exporter protein (LysE YggA)
UNDYM_1119	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
UNDYM_1121	COG0860	N-Acetylmuramoyl-L-alanine amidase
UNDYM_1122	COG0802	atpase or kinase
UNDYM_1123	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
UNDYM_1126	COG4566	intracellular signal transduction
UNDYM_1132	COG4974	Belongs to the 'phage' integrase family
UNDYM_1134	COG4771	TonB-dependent receptor
UNDYM_1139	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
UNDYM_1140	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
UNDYM_1142	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
UNDYM_1144	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
UNDYM_1145	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
UNDYM_1146	COG1116	anion transmembrane transporter activity
UNDYM_1148	COG2766	serine protein kinase
UNDYM_1149	COG2718	Belongs to the UPF0229 family
UNDYM_1150	COG2719	SpoVR family
UNDYM_1154	COG0454	-acetyltransferase
UNDYM_1154	COG0456	acetyltransferase
UNDYM_1158	COG0531	amino acid
UNDYM_1159	COG3045	CreA protein
UNDYM_1164	COG1131	(ABC) transporter
UNDYM_1165	COG0842	Transport permease protein
UNDYM_1166	COG1876	peptidase activity
UNDYM_1167	COG3023	N-Acetylmuramoyl-L-alanine amidase
UNDYM_1175	COG0583	DNA-binding transcription factor activity
UNDYM_1176	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
UNDYM_1177	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
UNDYM_1181	COG1649	PFAM Uncharacterised BCR, COG1649
UNDYM_1190	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
UNDYM_1191	COG0751	glycine-tRNA ligase activity
UNDYM_1192	COG0752	glycyl-tRNA synthetase alpha subunit
UNDYM_1195	COG0667	Aldo Keto reductase
UNDYM_1199	COG1506	peptidase
UNDYM_1199	COG0823	Involved in the tonB-independent uptake of proteins
UNDYM_1199	COG4946	Tricorn protease homolog
UNDYM_1214	COG5001	Diguanylate cyclase
UNDYM_1216	COG2318	DinB family
UNDYM_1217	COG0840	transmembrane signaling receptor activity
UNDYM_1220	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
UNDYM_1222	COG3104	oligopeptide transport
UNDYM_1227	COG0598	Magnesium transport protein CorA
UNDYM_1228	COG2207	Transcriptional regulator
UNDYM_1233	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
UNDYM_1237	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
UNDYM_1242	COG0259	pyridoxamine-phosphate oxidase activity
UNDYM_1243	COG3945	hemerythrin HHE cation binding domain
UNDYM_1244	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
UNDYM_1247	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
UNDYM_1248	COG0840	transmembrane signaling receptor activity
UNDYM_1254	COG0784	Response regulator, receiver
UNDYM_1254	COG3437	response regulator, receiver
UNDYM_1255	COG1309	transcriptional regulator
UNDYM_1256	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
UNDYM_1259	COG0493	'glutamate synthase
UNDYM_1261	COG1953	Uracil, thiamine, allantoin
UNDYM_1264	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
UNDYM_1269	COG0583	DNA-binding transcription factor activity
UNDYM_1270	COG1335	isochorismatase
UNDYM_1272	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
UNDYM_1273	COG5002	protein histidine kinase activity
UNDYM_1275	COG2815	serine threonine protein kinase
UNDYM_1275	COG0515	serine threonine protein kinase
UNDYM_1277	COG2223	nitrite transmembrane transporter activity
UNDYM_1278	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
UNDYM_1279	COG2146	nitrite reductase [NAD(P)H] activity
UNDYM_1280	COG0243	molybdopterin cofactor binding
UNDYM_1290	COG3590	peptidase
UNDYM_1296	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
UNDYM_1297	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
UNDYM_1298	COG0583	DNA-binding transcription factor activity
UNDYM_1300	COG4654	Cytochrome c, class I
UNDYM_1302	COG1522	sequence-specific DNA binding
UNDYM_1303	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
UNDYM_1308	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
UNDYM_1309	COG4206	TonB-dependent receptor
UNDYM_1310	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
UNDYM_1311	COG0508	dehydrogenase complex catalyzes the overall conversion of
UNDYM_1312	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
UNDYM_1313	COG0612	Peptidase, M16
UNDYM_1317	COG3706	GGDEF domain
UNDYM_1322	COG1136	(ABC) transporter
UNDYM_1332	COG0793	Belongs to the peptidase S41A family
UNDYM_1332	COG4946	Tricorn protease homolog
UNDYM_1334	COG2130	NADP-dependent
UNDYM_1335	COG0583	DNA-binding transcription factor activity
UNDYM_1337	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
UNDYM_1338	COG0543	2 iron, 2 sulfur cluster binding
UNDYM_1338	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
UNDYM_1340	COG5002	protein histidine kinase activity
UNDYM_1342	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
UNDYM_1343	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
UNDYM_1355	COG3706	GGDEF domain
UNDYM_1357	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
UNDYM_1359	COG0697	spore germination
UNDYM_1361	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
UNDYM_1365	COG1187	pseudouridine synthase activity
UNDYM_1366	COG1192	Involved in chromosome partitioning
UNDYM_1368	COG3594	Acyltransferase
UNDYM_1371	COG2205	protein histidine kinase activity
UNDYM_1372	COG0745	RESPONSE REGULATOR receiver
UNDYM_1373	COG1546	Belongs to the CinA family
UNDYM_1375	COG2509	5-formyltetrahydrofolate cyclo-ligase activity
UNDYM_1384	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
UNDYM_1385	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
UNDYM_1386	COG4221	oxidoreductase activity
UNDYM_1387	COG0824	Thioesterase
UNDYM_1390	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
UNDYM_1392	COG0612	Peptidase, M16
UNDYM_1398	COG1309	transcriptional regulator
UNDYM_1409	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
UNDYM_1410	COG0534	Mate efflux family protein
UNDYM_1412	COG0254	rRNA binding
UNDYM_1413	COG2860	membrane
UNDYM_1418	COG1538	Outer membrane efflux protein
UNDYM_1423	COG1959	2 iron, 2 sulfur cluster binding
UNDYM_1427	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
UNDYM_1430	COG1074	ATP-dependent DNA helicase activity
UNDYM_1435	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
UNDYM_1441	COG4771	TonB-dependent receptor
UNDYM_1444	COG1309	transcriptional regulator
UNDYM_1445	COG2081	HI0933 family
UNDYM_1446	COG0828	Belongs to the bacterial ribosomal protein bS21 family
UNDYM_1450	COG0513	Belongs to the DEAD box helicase family
UNDYM_1451	COG2423	ornithine cyclodeaminase activity
UNDYM_1453	COG0583	DNA-binding transcription factor activity
UNDYM_1455	COG1028	Short-chain dehydrogenase reductase Sdr
UNDYM_1457	COG1960	acyl-CoA dehydrogenase activity
UNDYM_1458	COG0318	PFAM AMP-dependent synthetase and ligase
UNDYM_1460	COG1090	epimerase
UNDYM_1463	COG0745	RESPONSE REGULATOR receiver
UNDYM_1464	COG0642	Histidine kinase
UNDYM_1468	COG1733	regulation of RNA biosynthetic process
UNDYM_1470	COG0702	epimerase
UNDYM_1472	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
UNDYM_1475	COG2197	response regulator
UNDYM_1476	COG4585	Histidine kinase
UNDYM_1477	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
UNDYM_1478	COG0616	signal peptide processing
UNDYM_1481	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
UNDYM_1484	COG0765	amino acid transport
UNDYM_1494	COG2971	BadF BadG BcrA BcrD
UNDYM_1495	COG2188	Transcriptional regulator
UNDYM_1497	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
UNDYM_1499	COG1175	transmembrane transport
UNDYM_1500	COG0395	ABC-type sugar transport system, permease component
UNDYM_1501	COG1472	Belongs to the glycosyl hydrolase 3 family
UNDYM_1502	COG3842	ATPase activity
UNDYM_1506	COG0583	DNA-binding transcription factor activity
UNDYM_1507	COG0604	alcohol dehydrogenase
UNDYM_1511	COG3279	Response regulator of the LytR AlgR family
UNDYM_1512	COG3275	phosphorelay sensor kinase activity
UNDYM_1519	COG4247	3-phytase (myo-inositol-hexaphosphate 3-phosphohydrolase)
UNDYM_1521	COG3706	GGDEF domain
UNDYM_1524	COG1506	peptidase
UNDYM_1524	COG0823	Involved in the tonB-independent uptake of proteins
UNDYM_1526	COG1794	racemase activity, acting on amino acids and derivatives
UNDYM_1528	COG1725	Transcriptional regulator
UNDYM_1529	COG1131	(ABC) transporter
UNDYM_1532	COG0697	spore germination
UNDYM_1533	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
UNDYM_1534	COG1570	exodeoxyribonuclease VII activity
UNDYM_1535	COG0811	peptide transport
UNDYM_1536	COG0848	biopolymer transport protein
UNDYM_1537	COG1663	tetraacyldisaccharide 4'-kinase activity
UNDYM_1538	COG2835	tetraacyldisaccharide 4'-kinase activity
UNDYM_1539	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
UNDYM_1540	COG0563	adenylate kinase activity
UNDYM_1546	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
UNDYM_1547	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
UNDYM_1547	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
UNDYM_1548	COG3264	Mechanosensitive ion channel
UNDYM_1548	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
UNDYM_1550	COG0745	RESPONSE REGULATOR receiver
UNDYM_1553	COG0267	Belongs to the bacterial ribosomal protein bL33 family
UNDYM_1554	COG0227	Belongs to the bacterial ribosomal protein bL28 family
UNDYM_1555	COG2003	Belongs to the UPF0758 family
UNDYM_1557	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
UNDYM_1558	COG0559	Belongs to the binding-protein-dependent transport system permease family
UNDYM_1562	COG2223	nitrite transmembrane transporter activity
UNDYM_1572	COG5492	domain, Protein
UNDYM_1572	COG4932	domain protein
UNDYM_1575	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
UNDYM_1576	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
UNDYM_1581	COG0312	modulator of DNA gyrase
UNDYM_1582	COG2894	cell division
UNDYM_1585	COG0489	protein tyrosine kinase activity
UNDYM_1587	COG0457	Tetratricopeptide repeat
UNDYM_1588	COG0457	Tetratricopeptide repeat
UNDYM_1590	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
UNDYM_1593	COG1666	GTP binding
UNDYM_1594	COG0812	UDP-N-acetylmuramate dehydrogenase activity
UNDYM_1596	COG0501	Belongs to the peptidase M48B family
UNDYM_1597	COG4269	membrane
UNDYM_1608	COG4221	oxidoreductase activity
UNDYM_1610	COG1028	Short-chain dehydrogenase reductase Sdr
UNDYM_1613	COG0582	viral genome integration into host DNA
UNDYM_1627	COG1896	Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates
UNDYM_1649	COG4695	Portal protein
UNDYM_1685	COG1994	Peptidase M50
UNDYM_1687	COG0640	Transcriptional regulator
UNDYM_1690	COG1234	tRNA 3'-trailer cleavage
UNDYM_1699	COG3483	tryptophan 2,3-dioxygenase activity
UNDYM_1701	COG1522	sequence-specific DNA binding
UNDYM_1704	COG1459	type II secretion system
UNDYM_1708	COG0728	peptidoglycan biosynthetic process
UNDYM_1710	COG4733	cellulase activity
UNDYM_1712	COG4676	Protein conserved in bacteria
UNDYM_1713	COG4676	Protein conserved in bacteria
UNDYM_1714	COG5445	Predicted secreted protein (DUF2300)
UNDYM_1715	COG2373	Large extracellular alpha-helical protein
UNDYM_1717	COG4685	Uncharacterized protein conserved in bacteria (DUF2138)
UNDYM_1719	COG2378	regulation of single-species biofilm formation
UNDYM_1720	COG3474	cytochrome
UNDYM_1728	COG0583	DNA-binding transcription factor activity
UNDYM_1730	COG3123	guanosine phosphorylase activity
UNDYM_1731	COG0137	argininosuccinate synthase activity
UNDYM_1732	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
UNDYM_1738	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
UNDYM_1741	COG1162	GTPase activity
UNDYM_1742	COG2154	pterin-4-alpha-carbinolamine dehydratase
UNDYM_1743	COG0501	Belongs to the peptidase M48B family
UNDYM_1744	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
UNDYM_1750	COG1546	Belongs to the CinA family
UNDYM_1750	COG1058	Belongs to the CinA family
UNDYM_1755	COG4977	sequence-specific DNA binding
UNDYM_1755	COG1917	Cupin 2, conserved barrel domain protein
UNDYM_1758	COG0745	RESPONSE REGULATOR receiver
UNDYM_1759	COG0642	Histidine kinase
UNDYM_1764	COG3706	GGDEF domain
UNDYM_1772	COG0583	DNA-binding transcription factor activity
UNDYM_1773	COG1028	Short-chain dehydrogenase reductase Sdr
UNDYM_1777	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
UNDYM_1778	COG2986	histidine ammonia-lyase
UNDYM_1780	COG1228	amidohydrolase
UNDYM_1783	COG0745	RESPONSE REGULATOR receiver
UNDYM_1785	COG0583	DNA-binding transcription factor activity
UNDYM_1788	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
UNDYM_1792	COG4589	Belongs to the CDS family
UNDYM_1793	COG2267	carboxylic ester hydrolase activity
UNDYM_1794	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
UNDYM_1797	COG4221	oxidoreductase activity
UNDYM_1805	COG0268	Binds directly to 16S ribosomal RNA
UNDYM_1813	COG1278	Cold shock
UNDYM_1814	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
UNDYM_1815	COG0542	response to heat
UNDYM_1818	COG1741	Belongs to the pirin family
UNDYM_1820	COG0756	dUTP diphosphatase activity
UNDYM_1821	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
UNDYM_1822	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
UNDYM_1823	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
UNDYM_1824	COG0196	riboflavin kinase activity
UNDYM_1832	COG0625	glutathione transferase activity
UNDYM_1835	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
UNDYM_1837	COG1385	rRNA (uridine-N3-)-methyltransferase activity
UNDYM_1839	COG0754	glutathionylspermidine amidase activity
UNDYM_1841	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
UNDYM_1842	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
UNDYM_1845	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
UNDYM_1846	COG0681	Belongs to the peptidase S26 family
UNDYM_1850	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
UNDYM_1851	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
UNDYM_1852	COG0368	Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
UNDYM_1856	COG4206	TonB-dependent receptor
UNDYM_1857	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
UNDYM_1858	COG1120	ATPase activity
UNDYM_1860	COG1797	cobyrinic acid a,c-diamide synthase activity
UNDYM_1862	COG1270	Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group
UNDYM_1864	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
UNDYM_1866	COG1492	cobalamin metabolic process
UNDYM_1876	COG0513	Belongs to the DEAD box helicase family
UNDYM_1877	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
UNDYM_1883	COG0601	transmembrane transport
UNDYM_1884	COG4166	transmembrane transport
UNDYM_1885	COG4166	transmembrane transport
UNDYM_1885	COG4166	transmembrane transport
UNDYM_1891	COG3706	GGDEF domain
UNDYM_1896	COG0700	Nucleoside recognition
UNDYM_1898	COG0402	S-adenosylhomocysteine deaminase activity
UNDYM_1900	COG0625	glutathione transferase activity
UNDYM_1901	COG0784	Response regulator, receiver
UNDYM_1901	COG3437	response regulator, receiver
UNDYM_1902	COG3852	Histidine kinase
UNDYM_1907	COG2207	Transcriptional regulator
UNDYM_1911	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
UNDYM_1911	COG4651	solute:proton antiporter activity
UNDYM_1916	COG1522	sequence-specific DNA binding
UNDYM_1923	COG0174	glutamine synthetase
UNDYM_1925	COG3852	Histidine kinase
UNDYM_1927	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
UNDYM_1929	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
UNDYM_1934	COG3145	DNA-N1-methyladenine dioxygenase activity
UNDYM_1936	COG3327	negative regulation of DNA-templated transcription, initiation
UNDYM_1937	COG3396	Phenylacetate-CoA oxygenase
UNDYM_1938	COG3460	Phenylacetate-CoA oxygenase
UNDYM_1939	COG3396	Phenylacetate-CoA oxygenase
UNDYM_1940	COG2151	metal-sulfur cluster biosynthetic enzyme
UNDYM_1941	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
UNDYM_1942	COG1024	Enoyl-CoA hydratase
UNDYM_1943	COG2050	protein possibly involved in aromatic compounds catabolism
UNDYM_1945	COG0183	Belongs to the thiolase family
UNDYM_1947	COG2030	dehydratase
UNDYM_1947	COG1012	belongs to the aldehyde dehydrogenase family
UNDYM_1948	COG4191	Histidine kinase
UNDYM_1949	COG3158	transport of potassium into the cell
UNDYM_1951	COG1214	PFAM Peptidase M22, glycoprotease
UNDYM_1953	COG1573	uracil-dna glycosylase
UNDYM_1955	COG0477	Major facilitator Superfamily
UNDYM_1966	COG0544	peptidyl-prolyl cis-trans isomerase activity
UNDYM_1967	COG0740	serine-type endopeptidase activity
UNDYM_1968	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
UNDYM_1969	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
UNDYM_1970	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
UNDYM_1971	COG0360	Binds together with S18 to 16S ribosomal RNA
UNDYM_1973	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
UNDYM_1974	COG0359	binds to the 23S rRNA
UNDYM_1975	COG0305	Participates in initiation and elongation during chromosome replication
UNDYM_1977	COG0306	phosphate transporter
UNDYM_1981	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
UNDYM_1982	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
UNDYM_1984	COG0473	3-isopropylmalate dehydrogenase activity
UNDYM_1985	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
UNDYM_1988	COG0101	tRNA pseudouridine synthase activity
UNDYM_1989	COG0481	GTPase activity
UNDYM_1990	COG0681	Belongs to the peptidase S26 family
UNDYM_1992	COG0571	ribonuclease III activity
UNDYM_1993	COG0571	ribonuclease III activity
UNDYM_1994	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
UNDYM_1995	COG1381	Involved in DNA repair and RecF pathway recombination
UNDYM_1996	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
UNDYM_1997	COG0736	holo-[acyl-carrier-protein] synthase activity
UNDYM_1998	COG0322	excinuclease ABC activity
UNDYM_1999	COG0322	excinuclease ABC activity
UNDYM_2000	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
UNDYM_2003	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
UNDYM_2003	COG2755	lipolytic protein G-D-S-L family
UNDYM_2006	COG4783	chaperone-mediated protein folding
UNDYM_2009	COG1309	transcriptional regulator
UNDYM_2012	COG2814	Major facilitator Superfamily
UNDYM_2013	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
UNDYM_2014	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
UNDYM_2018	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
UNDYM_2023	COG1815	bacterial-type flagellum-dependent cell motility
UNDYM_2024	COG1558	bacterial-type flagellum-dependent cell motility
UNDYM_2027	COG4787	bacterial-type flagellum-dependent cell motility
UNDYM_2029	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
UNDYM_2030	COG1706	bacterial-type flagellum-dependent cell motility
UNDYM_2032	COG1256	bacterial-type flagellum assembly
UNDYM_2035	COG1297	OPT oligopeptide transporter protein
UNDYM_2037	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
UNDYM_2038	COG3104	oligopeptide transport
UNDYM_2039	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
UNDYM_2042	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
UNDYM_2043	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
UNDYM_2044	COG0436	Aminotransferase
UNDYM_2046	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
UNDYM_2049	COG3622	Belongs to the hyi family
UNDYM_2050	COG2130	NADP-dependent
UNDYM_2056	COG1988	membrane-bound metal-dependent
UNDYM_2057	COG0521	Mo-molybdopterin cofactor biosynthetic process
UNDYM_2059	COG0312	modulator of DNA gyrase
UNDYM_2064	COG0683	leucine binding
UNDYM_2065	COG0165	Argininosuccinate lyase
UNDYM_2066	COG3275	phosphorelay sensor kinase activity
UNDYM_2068	COG1611	Belongs to the LOG family
UNDYM_2069	COG0784	Response regulator, receiver
UNDYM_2069	COG0835	chemotaxis
UNDYM_2072	COG3590	peptidase
UNDYM_2073	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
UNDYM_2080	COG1136	(ABC) transporter
UNDYM_2081	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
UNDYM_2083	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
UNDYM_2084	COG3278	Belongs to the heme-copper respiratory oxidase family
UNDYM_2090	COG0635	Involved in the biosynthesis of porphyrin-containing compound
UNDYM_2096	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
UNDYM_2097	COG2201	protein-glutamate methylesterase activity
UNDYM_2101	COG3214	Protein conserved in bacteria
UNDYM_2103	COG0181	hydroxymethylbilane synthase activity
UNDYM_2105	COG2959	enzyme of heme biosynthesis
UNDYM_2107	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
UNDYM_2108	COG2815	serine threonine protein kinase
UNDYM_2108	COG0515	serine threonine protein kinase
UNDYM_2110	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
UNDYM_2110	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
UNDYM_2111	COG0347	Belongs to the P(II) protein family
UNDYM_2113	COG2840	Smr protein MutS2
UNDYM_2115	COG0492	ferredoxin-NADP+ reductase activity
UNDYM_2116	COG1674	ftsk spoiiie
UNDYM_2117	COG1674	ftsk spoiiie
UNDYM_2118	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
UNDYM_2119	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
UNDYM_2121	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
UNDYM_2122	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
UNDYM_2123	COG3300	MHYT domain
UNDYM_2123	COG5001	Diguanylate cyclase
UNDYM_2134	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
UNDYM_2134	COG2755	lipolytic protein G-D-S-L family
UNDYM_2135	COG3128	pkhd-type hydroxylase
UNDYM_2136	COG4774	siderophore transport
UNDYM_2138	COG0303	'Molybdopterin
UNDYM_2139	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
UNDYM_2140	COG0314	molybdopterin synthase activity
UNDYM_2141	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
UNDYM_2145	COG0542	response to heat
UNDYM_2146	COG0542	response to heat
UNDYM_2150	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
UNDYM_2154	COG0084	hydrolase, TatD family'
UNDYM_2156	COG2267	carboxylic ester hydrolase activity
UNDYM_2158	COG0504	CTP synthase activity
UNDYM_2159	COG0148	phosphopyruvate hydratase activity
UNDYM_2160	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
UNDYM_2164	COG0411	ABC transporter
UNDYM_2170	COG1028	Short-chain dehydrogenase reductase Sdr
UNDYM_2172	COG1024	Enoyl-CoA hydratase
UNDYM_2173	COG1960	acyl-CoA dehydrogenase activity
UNDYM_2176	COG1250	3-hydroxyacyl-CoA dehydrogenase
UNDYM_2177	COG1960	acyl-CoA dehydrogenase activity
UNDYM_2179	COG1960	acyl-CoA dehydrogenase activity
UNDYM_2181	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
UNDYM_2182	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
UNDYM_2183	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
UNDYM_2185	COG1804	L-carnitine dehydratase bile acid-inducible protein F
UNDYM_2186	COG2095	MarC family integral membrane protein
UNDYM_2187	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
UNDYM_2205	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
UNDYM_2206	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
UNDYM_2207	COG4942	peptidase
UNDYM_2207	COG1388	LysM domain
UNDYM_2209	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
UNDYM_2210	COG0105	UTP biosynthetic process
UNDYM_2211	COG0820	rRNA (adenine-C2-)-methyltransferase activity
UNDYM_2213	COG1426	Protein conserved in bacteria
UNDYM_2214	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
UNDYM_2215	COG0124	histidyl-tRNA synthetase
UNDYM_2218	COG1160	GTP binding
UNDYM_2219	COG1923	regulation of RNA biosynthetic process
UNDYM_2220	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
UNDYM_2221	COG0330	HflC and HflK could
UNDYM_2222	COG0330	HflC and HflK could
UNDYM_2223	COG3705	Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
UNDYM_2224	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
UNDYM_2225	COG2236	Acts on guanine, xanthine and to a lesser extent hypoxanthine
UNDYM_2226	COG0557	exoribonuclease II activity
UNDYM_2227	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
UNDYM_2228	COG1045	serine acetyltransferase
UNDYM_2229	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
UNDYM_2229	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
UNDYM_2230	COG1684	flagellar biosynthetic protein fliR
UNDYM_2233	COG1338	Plays a role in the flagellum-specific transport system
UNDYM_2235	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
UNDYM_2239	COG2882	bacterial-type flagellum organization
UNDYM_2240	COG1157	protein secretion by the type III secretion system
UNDYM_2241	COG1157	protein secretion by the type III secretion system
UNDYM_2243	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
UNDYM_2245	COG1677	Flagellar hook-basal body complex protein FliE
UNDYM_2246	COG5581	Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)- dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility
UNDYM_2247	COG2257	FlhB HrpN YscU SpaS Family
UNDYM_2251	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
UNDYM_2251	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
UNDYM_2263	COG2197	response regulator
UNDYM_2266	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
UNDYM_2267	COG1758	RNA polymerase activity
UNDYM_2269	COG1561	YicC-like family, N-terminal region
UNDYM_2270	COG3266	domain, Protein
UNDYM_2270	COG0515	serine threonine protein kinase
UNDYM_2271	COG0631	protein serine/threonine phosphatase activity
UNDYM_2273	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
UNDYM_2274	COG0635	Involved in the biosynthesis of porphyrin-containing compound
UNDYM_2276	COG3300	MHYT domain
UNDYM_2276	COG5001	Diguanylate cyclase
UNDYM_2316	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
UNDYM_2317	COG0732	type I restriction modification DNA specificity domain
UNDYM_2319	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
UNDYM_2323	COG0587	DNA-directed DNA polymerase activity
UNDYM_2331	COG0582	viral genome integration into host DNA
UNDYM_2348	COG0277	FAD linked oxidase domain protein
UNDYM_2349	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
UNDYM_2351	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
UNDYM_2353	COG2204	response regulator
UNDYM_2357	COG1716	ATPase activity
UNDYM_2357	COG5001	Diguanylate cyclase
UNDYM_2358	COG4191	Histidine kinase
UNDYM_2362	COG0411	ABC transporter
UNDYM_2364	COG0829	nickel cation binding
UNDYM_2371	COG1595	DNA-templated transcription, initiation
UNDYM_2372	COG0831	urea catabolic process
UNDYM_2373	COG0832	Belongs to the urease beta subunit family
UNDYM_2374	COG0804	urea catabolic process
UNDYM_2375	COG2371	Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly
UNDYM_2376	COG0830	nickel cation binding
UNDYM_2377	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
UNDYM_2379	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
UNDYM_2380	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
UNDYM_2384	COG1012	belongs to the aldehyde dehydrogenase family
UNDYM_2387	COG1309	transcriptional regulator
UNDYM_2388	COG1960	acyl-CoA dehydrogenase activity
UNDYM_2389	COG1804	L-carnitine dehydratase bile acid-inducible protein F
UNDYM_2390	COG4999	Histidine kinase
UNDYM_2390	COG3850	Histidine kinase
UNDYM_2390	COG3437	response regulator, receiver
UNDYM_2390	COG2205	protein histidine kinase activity
UNDYM_2391	COG1228	amidohydrolase
UNDYM_2392	COG1448	Aminotransferase
UNDYM_2400	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
UNDYM_2403	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
UNDYM_2404	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
UNDYM_2408	COG2850	peptidyl-arginine hydroxylation
UNDYM_2409	COG1047	Peptidyl-prolyl cis-trans
UNDYM_2410	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
UNDYM_2412	COG0513	Belongs to the DEAD box helicase family
UNDYM_2416	COG0625	glutathione transferase activity
UNDYM_2417	COG0631	protein serine/threonine phosphatase activity
UNDYM_2419	COG1199	ATP-dependent helicase activity
UNDYM_2421	COG3590	peptidase
UNDYM_2422	COG4608	Belongs to the ABC transporter superfamily
UNDYM_2423	COG0444	Belongs to the ABC transporter superfamily
UNDYM_2424	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
UNDYM_2425	COG0601	transmembrane transport
UNDYM_2426	COG0747	negative chemotaxis
UNDYM_2431	COG1136	(ABC) transporter
UNDYM_2436	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
UNDYM_2437	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
UNDYM_2438	COG0726	polysaccharide deacetylase
UNDYM_2439	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
UNDYM_2439	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
UNDYM_2441	COG0463	Glycosyl transferase, family 2
UNDYM_2442	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
UNDYM_2443	COG2076	Multidrug Resistance protein
UNDYM_2450	COG0436	Aminotransferase
UNDYM_2457	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
UNDYM_2458	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
UNDYM_2461	COG1247	-acetyltransferase
UNDYM_2462	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
UNDYM_2469	COG3706	GGDEF domain
UNDYM_2471	COG1024	Enoyl-CoA hydratase
UNDYM_2471	COG1250	3-hydroxyacyl-CoA dehydrogenase
UNDYM_2472	COG0488	(ABC) transporter
UNDYM_2476	COG1846	Transcriptional regulator
UNDYM_2476	COG0456	acetyltransferase
UNDYM_2483	COG1960	acyl-CoA dehydrogenase activity
UNDYM_2485	COG0560	Phosphoserine phosphatase
UNDYM_2486	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
UNDYM_2488	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
UNDYM_2490	COG1047	Peptidyl-prolyl cis-trans
UNDYM_2491	COG0484	heat shock protein binding
UNDYM_2498	COG1979	alcohol dehydrogenase
UNDYM_2499	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
UNDYM_2502	COG0333	Belongs to the bacterial ribosomal protein bL32 family
UNDYM_2503	COG0416	fatty acid biosynthetic process
UNDYM_2504	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
UNDYM_2507	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
UNDYM_2508	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
UNDYM_2512	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
UNDYM_2514	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
UNDYM_2515	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
UNDYM_2516	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
UNDYM_2527	COG1902	pentaerythritol trinitrate reductase activity
UNDYM_2530	COG3228	Belongs to the MtfA family
UNDYM_2531	COG0488	(ABC) transporter
UNDYM_2532	COG2890	protein-(glutamine-N5) methyltransferase activity
UNDYM_2533	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
UNDYM_2534	COG1393	Belongs to the ArsC family
UNDYM_2536	COG2171	N-acyltransferase activity
UNDYM_2540	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
UNDYM_2541	COG1210	Utp--glucose-1-phosphate uridylyltransferase
UNDYM_2542	COG0242	peptide deformylase activity
UNDYM_2543	COG1187	pseudouridine synthase activity
UNDYM_2544	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
UNDYM_2545	COG0024	Methionine aminopeptidase
UNDYM_2546	COG0052	Belongs to the universal ribosomal protein uS2 family
UNDYM_2547	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
UNDYM_2548	COG0528	UMP kinase activity
UNDYM_2549	COG0233	cytoplasmic translational termination
UNDYM_2550	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
UNDYM_2551	COG0575	Belongs to the CDS family
UNDYM_2552	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
UNDYM_2553	COG0750	zinc metalloprotease
UNDYM_2556	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
UNDYM_2557	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
UNDYM_2558	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
UNDYM_2559	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
UNDYM_2560	COG0084	hydrolase, TatD family'
UNDYM_2561	COG0084	hydrolase, TatD family'
UNDYM_2562	COG0666	response to abiotic stimulus
UNDYM_2564	COG1116	anion transmembrane transporter activity
UNDYM_2565	COG0587	DNA-directed DNA polymerase activity
UNDYM_2572	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
UNDYM_2574	COG1450	Type ii and iii secretion system protein
UNDYM_2590	COG1704	LemA family
UNDYM_2591	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
UNDYM_2596	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
UNDYM_2597	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
UNDYM_2600	COG2217	Heavy metal translocating P-type atpase
UNDYM_2607	COG2132	Multicopper oxidase
UNDYM_2618	COG0738	Major facilitator superfamily
UNDYM_2620	COG3537	Alpha-1,2-mannosidase
UNDYM_2621	COG1609	Transcriptional regulator
UNDYM_2629	COG4191	Histidine kinase
UNDYM_2631	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
UNDYM_2632	COG0010	Belongs to the arginase family
UNDYM_2634	COG2264	protein methyltransferase activity
UNDYM_2635	COG2205	protein histidine kinase activity
UNDYM_2638	COG0501	Belongs to the peptidase M48B family
UNDYM_2640	COG0697	spore germination
UNDYM_2641	COG0625	glutathione transferase activity
UNDYM_2644	COG1960	acyl-CoA dehydrogenase activity
UNDYM_2646	COG2030	dehydratase
UNDYM_2646	COG1012	belongs to the aldehyde dehydrogenase family
UNDYM_2651	COG2954	triphosphatase activity
UNDYM_2652	COG2866	Carboxypeptidase
UNDYM_2653	COG3507	Belongs to the glycosyl hydrolase 43 family
UNDYM_2654	COG3534	alpha-L-arabinofuranosidase
UNDYM_2657	COG2755	lipolytic protein G-D-S-L family
UNDYM_2660	COG0657	acetylesterase activity
UNDYM_2660	COG2755	lipolytic protein G-D-S-L family
UNDYM_2662	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
UNDYM_2665	COG4952	isomerase
UNDYM_2666	COG3347	Dehydrogenase
UNDYM_2666	COG1028	Short-chain dehydrogenase reductase Sdr
UNDYM_2668	COG1879	ABC-type sugar transport system periplasmic component
UNDYM_2669	COG1129	ABC transporter
UNDYM_2670	COG1172	Belongs to the binding-protein-dependent transport system permease family
UNDYM_2671	COG1172	Belongs to the binding-protein-dependent transport system permease family
UNDYM_2674	COG3940	Belongs to the glycosyl hydrolase 43 family
UNDYM_2679	COG1129	ABC transporter
UNDYM_2682	COG0800	Aldolase
UNDYM_2683	COG3734	2-keto-3-deoxy-galactonokinase
UNDYM_2684	COG4948	Mandelate Racemase Muconate Lactonizing
UNDYM_2687	COG3401	FG-GAP repeat protein
UNDYM_2690	COG2755	lipolytic protein G-D-S-L family
UNDYM_2691	COG2755	lipolytic protein G-D-S-L family
UNDYM_2699	COG4977	sequence-specific DNA binding
UNDYM_2703	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
UNDYM_2704	COG0243	molybdopterin cofactor binding
UNDYM_2708	COG1760	l-serine dehydratase
UNDYM_2714	COG3290	protein histidine kinase activity
UNDYM_2714	COG3829	transcription factor binding
UNDYM_2715	COG1012	belongs to the aldehyde dehydrogenase family
UNDYM_2718	COG1104	cysteine desulfurase activity
UNDYM_2719	COG0822	iron-sulfur transferase activity
UNDYM_2720	COG0316	Belongs to the HesB IscA family
UNDYM_2721	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
UNDYM_2722	COG0443	Heat shock 70 kDa protein
UNDYM_2723	COG0633	Ferredoxin
UNDYM_2724	COG2975	iron-sulfur cluster assembly
UNDYM_2726	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
UNDYM_2729	COG3713	MltA-interacting MipA family protein
UNDYM_2730	COG1982	Orn Lys Arg decarboxylase major
UNDYM_2734	COG2066	Belongs to the glutaminase family
UNDYM_2735	COG0717	Belongs to the dCTP deaminase family
UNDYM_2736	COG1032	radical SAM domain protein
UNDYM_2738	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
UNDYM_2739	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
UNDYM_2740	COG1132	(ABC) transporter
UNDYM_2742	COG3380	Catalyzes the oxidation of the 1,2-dihydro- and 1,6- dihydro- isomeric forms of beta-NAD(P) back to beta-NAD(P) . May serve to protect primary metabolism dehydrogenases from inhibition by the 1,2-dihydro- and 1,6-dihydro-beta-NAD(P) isomers
UNDYM_2747	COG0596	Alpha beta hydrolase
UNDYM_2748	COG1280	lysine exporter protein (LysE YggA)
UNDYM_2751	COG0529	Catalyzes the synthesis of activated sulfate
UNDYM_2752	COG0840	transmembrane signaling receptor activity
UNDYM_2755	COG0824	Thioesterase
UNDYM_2756	COG0596	Alpha beta hydrolase
UNDYM_2759	COG2130	NADP-dependent
UNDYM_2763	COG1960	acyl-CoA dehydrogenase activity
UNDYM_2764	COG0183	Belongs to the thiolase family
UNDYM_2766	COG1619	proteins homologs of microcin C7 resistance protein MccF
UNDYM_2769	COG0602	queuosine metabolic process
UNDYM_2771	COG0518	GMP synthase (glutamine-hydrolyzing) activity
UNDYM_2771	COG0519	Catalyzes the synthesis of GMP from XMP
UNDYM_2776	COG2914	Belongs to the UPF0125 (RnfH) family
UNDYM_2779	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
UNDYM_2781	COG0745	RESPONSE REGULATOR receiver
UNDYM_2782	COG2205	protein histidine kinase activity
UNDYM_2785	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
UNDYM_2786	COG0436	Aminotransferase
UNDYM_2790	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
UNDYM_2791	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
UNDYM_2793	COG0508	dehydrogenase complex catalyzes the overall conversion of
UNDYM_2794	COG0567	Dehydrogenase, E1 component
UNDYM_2795	COG0372	Belongs to the citrate synthase family
UNDYM_2796	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
UNDYM_2797	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
UNDYM_2798	COG1053	succinate dehydrogenase
UNDYM_2800	COG2009	succinate dehydrogenase
UNDYM_2801	COG2188	Transcriptional regulator
UNDYM_2805	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
UNDYM_2807	COG0626	cystathionine gamma-synthase activity
UNDYM_2810	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
UNDYM_2812	COG1028	Short-chain dehydrogenase reductase Sdr
UNDYM_2813	COG3243	poly(R)-hydroxyalkanoic acid synthase
UNDYM_2816	COG0564	pseudouridine synthase activity
UNDYM_2818	COG3022	response to hydroperoxide
UNDYM_2820	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
UNDYM_2821	COG0784	Response regulator, receiver
UNDYM_2821	COG0643	Histidine kinase
UNDYM_2821	COG2198	Histidine kinase
UNDYM_2822	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
UNDYM_2823	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
UNDYM_2824	COG2917	probably involved in intracellular septation
UNDYM_2826	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
UNDYM_2828	COG0047	phosphoribosylformylglycinamidine synthase activity
UNDYM_2828	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
UNDYM_2829	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
UNDYM_2829	COG0047	phosphoribosylformylglycinamidine synthase activity
UNDYM_2830	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
UNDYM_2830	COG0047	phosphoribosylformylglycinamidine synthase activity
UNDYM_2831	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
UNDYM_2833	COG0745	RESPONSE REGULATOR receiver
UNDYM_2834	COG2201	protein-glutamate methylesterase activity
UNDYM_2835	COG1871	Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis
UNDYM_2837	COG0840	transmembrane signaling receptor activity
UNDYM_2838	COG0835	chemotaxis
UNDYM_2839	COG2198	Histidine kinase
UNDYM_2839	COG0643	Histidine kinase
UNDYM_2840	COG0745	RESPONSE REGULATOR receiver
UNDYM_2842	COG1360	Flagellar Motor Protein
UNDYM_2847	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
UNDYM_2848	COG0037	tRNA processing
UNDYM_2849	COG0825	malonyl-CoA metabolic process
UNDYM_2850	COG3063	Type IV pilus biogenesis stability protein PilW
UNDYM_2853	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
UNDYM_2854	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
UNDYM_2855	COG4181	ATPase activity
UNDYM_2857	COG2603	Catalyzes the transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA
UNDYM_2859	COG2217	Heavy metal translocating P-type atpase
UNDYM_2862	COG0546	phosphoglycolate phosphatase activity
UNDYM_2864	COG1530	ribonuclease E activity
UNDYM_2866	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
UNDYM_2867	COG0746	molybdenum cofactor guanylyltransferase activity
UNDYM_2868	COG0303	'Molybdopterin
UNDYM_2873	COG5001	Diguanylate cyclase
UNDYM_2873	COG3300	MHYT domain
UNDYM_2875	COG0789	Transcriptional regulator
UNDYM_2876	COG1322	Protein conserved in bacteria
UNDYM_2878	COG0625	glutathione transferase activity
UNDYM_2879	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
UNDYM_2881	COG0596	Alpha beta hydrolase
UNDYM_2882	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
UNDYM_2886	COG2833	Protein of unknown function (DUF455)
UNDYM_2888	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
UNDYM_2893	COG4191	Histidine kinase
UNDYM_2894	COG1131	(ABC) transporter
UNDYM_2897	COG1164	Oligoendopeptidase f
UNDYM_2900	COG0697	spore germination
UNDYM_2902	COG1643	Atp-dependent helicase
UNDYM_2904	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
UNDYM_2904	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
UNDYM_2905	COG2924	Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes
UNDYM_2906	COG0288	reversible hydration of carbon dioxide
UNDYM_2907	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
UNDYM_2909	COG3012	SEC-C Motif Domain Protein
UNDYM_2909	COG3318	Belongs to the UPF0149 family
UNDYM_2912	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
UNDYM_2913	COG0492	ferredoxin-NADP+ reductase activity
UNDYM_2915	COG3850	Histidine kinase
UNDYM_2915	COG4999	Histidine kinase
UNDYM_2915	COG2205	protein histidine kinase activity
UNDYM_2915	COG3437	response regulator, receiver
UNDYM_2917	COG2878	Part of a membrane complex involved in electron transport
UNDYM_2918	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
UNDYM_2919	COG0778	Nitroreductase
UNDYM_2921	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
UNDYM_2922	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
UNDYM_2924	COG1994	Peptidase M50
UNDYM_2925	COG0009	L-threonylcarbamoyladenylate synthase
UNDYM_2926	COG0501	Belongs to the peptidase M48B family
UNDYM_2927	COG0613	PHP domain protein
UNDYM_2931	COG1131	(ABC) transporter
UNDYM_2934	COG3147	Non-essential cell division protein that could be required for efficient cell constriction
UNDYM_2935	COG0285	dihydrofolate synthase activity
UNDYM_2936	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
UNDYM_2937	COG0159	tryptophan synthase activity
UNDYM_2938	COG0133	tryptophan synthase activity
UNDYM_2939	COG0133	tryptophan synthase activity
UNDYM_2940	COG0135	phosphoribosylanthranilate isomerase activity
UNDYM_2943	COG1922	lipopolysaccharide N-acetylmannosaminouronosyltransferase activity
UNDYM_2944	COG2224	Isocitrate lyase
UNDYM_2948	COG1216	Glycosyl transferase, family 2
UNDYM_2949	COG0489	protein tyrosine kinase activity
UNDYM_2949	COG3206	protein involved in exopolysaccharide biosynthesis
UNDYM_2952	COG1216	Glycosyl transferase, family 2
UNDYM_2952	COG1442	glycosyl transferase family 8
UNDYM_2953	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
UNDYM_2955	COG1295	ribonuclease BN
UNDYM_2958	COG0277	FAD linked oxidase domain protein
UNDYM_2959	COG0840	transmembrane signaling receptor activity
UNDYM_2960	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
UNDYM_2963	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
UNDYM_2965	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
UNDYM_2966	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
UNDYM_2968	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
UNDYM_2969	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
UNDYM_2970	COG0505	Belongs to the CarA family
UNDYM_2971	COG3193	protein, possibly involved in utilization of glycolate and propanediol
UNDYM_2973	COG1752	Esterase of the alpha-beta hydrolase superfamily
UNDYM_2978	COG2205	protein histidine kinase activity
UNDYM_2978	COG0784	Response regulator, receiver
UNDYM_2978	COG5002	protein histidine kinase activity
UNDYM_2986	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
UNDYM_2992	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
UNDYM_2993	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
UNDYM_2994	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
UNDYM_2996	COG0779	Required for maturation of 30S ribosomal subunits
UNDYM_2997	COG1187	pseudouridine synthase activity
UNDYM_2998	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
UNDYM_3003	COG0004	ammonium transporteR
UNDYM_3004	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
UNDYM_3005	COG2935	proteasome-mediated ubiquitin-dependent protein catabolic process
UNDYM_3006	COG0167	dihydroorotate dehydrogenase activity
UNDYM_3007	COG0667	Aldo Keto reductase
UNDYM_3010	COG4682	membrane
UNDYM_3012	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
UNDYM_3014	COG0730	response to heat
UNDYM_3015	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
UNDYM_3017	COG0175	sulfate reduction
UNDYM_3019	COG2895	sulfate adenylyltransferase (ATP) activity
UNDYM_3020	COG1648	precorrin-2 dehydrogenase activity
UNDYM_3020	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
UNDYM_3024	COG0795	lipopolysaccharide-transporting ATPase activity
UNDYM_3025	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
UNDYM_3027	COG0708	Exodeoxyribonuclease III
UNDYM_3028	COG0840	transmembrane signaling receptor activity
UNDYM_3031	COG1132	(ABC) transporter
UNDYM_3032	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
UNDYM_3032	COG0189	ligase activity
UNDYM_3034	COG0189	ligase activity
UNDYM_3034	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
UNDYM_3035	COG1028	Short-chain dehydrogenase reductase Sdr
UNDYM_3038	COG0693	protein deglycase activity
UNDYM_3039	COG3706	GGDEF domain
UNDYM_3042	COG0556	nucleotide-excision repair
UNDYM_3045	COG1969	Ni Fe-hydrogenase, b-type cytochrome subunit
UNDYM_3047	COG3128	pkhd-type hydroxylase
UNDYM_3049	COG4774	siderophore transport
UNDYM_3053	COG1309	transcriptional regulator
UNDYM_3055	COG0840	transmembrane signaling receptor activity
UNDYM_3057	COG0776	regulation of translation
UNDYM_3058	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
UNDYM_3058	COG0072	phenylalanine-tRNA ligase activity
UNDYM_3059	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
UNDYM_3060	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
UNDYM_3061	COG0291	Belongs to the bacterial ribosomal protein bL35 family
UNDYM_3062	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
UNDYM_3063	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
UNDYM_3064	COG1230	cation diffusion facilitator family transporter
UNDYM_3066	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
UNDYM_3067	COG0251	oxidation-reduction process
UNDYM_3069	COG1028	Short-chain dehydrogenase reductase Sdr
UNDYM_3073	COG4566	intracellular signal transduction
UNDYM_3075	COG1028	Short-chain dehydrogenase reductase Sdr
UNDYM_3080	COG1007	ATP synthesis coupled electron transport
UNDYM_3083	COG0713	ATP synthesis coupled electron transport
UNDYM_3085	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
UNDYM_3086	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
UNDYM_3087	COG1034	ATP synthesis coupled electron transport
UNDYM_3089	COG1905	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
UNDYM_3090	COG0649	NAD binding
UNDYM_3091	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
UNDYM_3092	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
UNDYM_3093	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
UNDYM_3095	COG0149	triose-phosphate isomerase activity
UNDYM_3098	COG1185	polyribonucleotide nucleotidyltransferase activity
UNDYM_3099	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
UNDYM_3101	COG1183	phosphatidylcholine synthase activity
UNDYM_3102	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
UNDYM_3103	COG0440	acetolactate synthase activity
UNDYM_3104	COG0028	Belongs to the TPP enzyme family
UNDYM_3105	COG1595	DNA-templated transcription, initiation
UNDYM_3109	COG1309	transcriptional regulator
UNDYM_3113	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
UNDYM_3114	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
UNDYM_3115	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
UNDYM_3123	COG1729	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
UNDYM_3124	COG2885	chlorophyll binding
UNDYM_3125	COG0823	Involved in the tonB-independent uptake of proteins
UNDYM_3128	COG3038	cytochrome b561
UNDYM_3137	COG0697	spore germination
UNDYM_3139	COG0328	RNA-DNA hybrid ribonuclease activity
UNDYM_3141	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
UNDYM_3143	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
UNDYM_3147	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
UNDYM_3151	COG0747	negative chemotaxis
UNDYM_3153	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
UNDYM_3156	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
UNDYM_3157	COG0564	pseudouridine synthase activity
UNDYM_3158	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
UNDYM_3158	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
UNDYM_3159	COG0489	protein tyrosine kinase activity
UNDYM_3167	COG3250	beta-galactosidase activity
UNDYM_3169	COG3250	beta-galactosidase activity
UNDYM_3174	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
UNDYM_3174	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
UNDYM_3177	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
UNDYM_3181	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
UNDYM_3182	COG0581	inorganic phosphate transmembrane transporter activity
UNDYM_3183	COG0573	inorganic phosphate transmembrane transporter activity
UNDYM_3192	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
UNDYM_3193	COG3527	Alpha-acetolactate decarboxylase
UNDYM_3198	COG2010	Cytochrome c
UNDYM_3198	COG1529	Aldehyde oxidase and xanthine dehydrogenase
UNDYM_3201	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
UNDYM_3205	COG4206	TonB-dependent receptor
UNDYM_3210	COG2205	protein histidine kinase activity
UNDYM_3211	COG0745	RESPONSE REGULATOR receiver
UNDYM_3223	COG0527	aspartate kinase activity
UNDYM_3226	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
UNDYM_3227	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
UNDYM_3229	COG0583	DNA-binding transcription factor activity
UNDYM_3230	COG0840	transmembrane signaling receptor activity
UNDYM_3231	COG1278	Cold shock
UNDYM_3233	COG2050	protein possibly involved in aromatic compounds catabolism
UNDYM_3234	COG0183	Belongs to the thiolase family
UNDYM_3235	COG1024	Enoyl-CoA hydratase
UNDYM_3235	COG1250	3-hydroxyacyl-CoA dehydrogenase
UNDYM_3236	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
UNDYM_3238	COG2843	Capsule synthesis protein
UNDYM_3239	COG2871	sodium ion transport
UNDYM_3244	COG0583	DNA-binding transcription factor activity
UNDYM_3245	COG1752	Esterase of the alpha-beta hydrolase superfamily
UNDYM_3249	COG0840	transmembrane signaling receptor activity
UNDYM_3259	COG3829	transcription factor binding
UNDYM_3262	COG4251	negative regulation of phosphorylation
UNDYM_3262	COG3706	GGDEF domain
UNDYM_3262	COG5001	Diguanylate cyclase
UNDYM_3262	COG2203	Gaf domain
UNDYM_3263	COG3221	ABC-type phosphate phosphonate transport system periplasmic component
UNDYM_3264	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
UNDYM_3265	COG3639	organic phosphonate transmembrane transporter activity
UNDYM_3266	COG3639	organic phosphonate transmembrane transporter activity
UNDYM_3267	COG1288	antiporter activity
UNDYM_3269	COG1737	Transcriptional regulator
UNDYM_3272	COG0840	transmembrane signaling receptor activity
UNDYM_3279	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
UNDYM_3279	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
UNDYM_3280	COG0509	glycine decarboxylation via glycine cleavage system
UNDYM_3281	COG0404	The glycine cleavage system catalyzes the degradation of glycine
UNDYM_3285	COG1132	(ABC) transporter
UNDYM_3287	COG1309	transcriptional regulator
UNDYM_3289	COG1574	metal-dependent hydrolase with the TIM-barrel fold
UNDYM_3291	COG0604	alcohol dehydrogenase
UNDYM_3292	COG0300	oxidoreductase activity
UNDYM_3301	COG3220	belongs to the UPF0276 family
UNDYM_3305	COG2703	oxygen carrier activity
UNDYM_3307	COG1763	Mo-molybdopterin cofactor biosynthetic process
UNDYM_3317	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
UNDYM_3318	COG0166	Belongs to the GPI family
UNDYM_3321	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
UNDYM_3322	COG0363	glucosamine-6-phosphate deaminase activity
UNDYM_3323	COG1737	Transcriptional regulator
UNDYM_3328	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
UNDYM_3329	COG0129	dihydroxy-acid dehydratase activity
UNDYM_3330	COG0158	D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1
UNDYM_3331	COG0308	aminopeptidase N
UNDYM_3336	COG0697	spore germination
UNDYM_3337	COG0433	COG0433 Predicted ATPase
UNDYM_3338	COG0217	transcriptional regulatory protein
UNDYM_3339	COG0151	Belongs to the GarS family
UNDYM_3340	COG0408	coproporphyrinogen oxidase activity
UNDYM_3341	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
UNDYM_3342	COG0799	negative regulation of ribosome biogenesis
UNDYM_3343	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
UNDYM_3344	COG0424	maF-like protein
UNDYM_3345	COG1530	ribonuclease E activity
UNDYM_3348	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
UNDYM_3350	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
UNDYM_3351	COG0842	Transport permease protein
UNDYM_3352	COG1129	ABC transporter
UNDYM_3352	COG0842	Transport permease protein
UNDYM_3353	COG1129	ABC transporter
UNDYM_3353	COG0842	Transport permease protein
UNDYM_3356	COG3243	poly(R)-hydroxyalkanoic acid synthase
UNDYM_3358	COG3447	MASE1 domain protein
UNDYM_3358	COG5001	Diguanylate cyclase
UNDYM_3358	COG5002	protein histidine kinase activity
UNDYM_3360	COG0859	PFAM glycosyl transferase family 9
UNDYM_3367	COG3706	GGDEF domain
UNDYM_3368	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
UNDYM_3373	COG0583	DNA-binding transcription factor activity
UNDYM_3374	COG4336	lyase activity
UNDYM_3376	COG0071	Belongs to the small heat shock protein (HSP20) family
UNDYM_3388	COG0492	ferredoxin-NADP+ reductase activity
UNDYM_3389	COG4232	protein-disulfide reductase activity
UNDYM_3392	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
UNDYM_3400	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
UNDYM_3402	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
UNDYM_3412	COG3275	phosphorelay sensor kinase activity
UNDYM_3413	COG3279	Response regulator of the LytR AlgR family
UNDYM_3417	COG0840	transmembrane signaling receptor activity
UNDYM_3420	COG1172	Belongs to the binding-protein-dependent transport system permease family
UNDYM_3423	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
UNDYM_3427	COG0284	orotidine-5'-phosphate decarboxylase activity
UNDYM_3428	COG1846	Transcriptional regulator
UNDYM_3429	COG1764	response to oxidative stress
UNDYM_3432	COG1999	signal sequence binding
UNDYM_3448	COG1270	Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group
UNDYM_3450	COG0335	large ribosomal subunit rRNA binding
UNDYM_3451	COG0336	Belongs to the RNA methyltransferase TrmD family
UNDYM_3452	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
UNDYM_3453	COG0228	four-way junction DNA binding
UNDYM_3457	COG1960	acyl-CoA dehydrogenase activity
UNDYM_3460	COG0425	Belongs to the sulfur carrier protein TusA family
UNDYM_3462	COG1247	-acetyltransferase
UNDYM_3463	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
UNDYM_3468	COG1136	(ABC) transporter
UNDYM_3469	COG0789	Transcriptional regulator
UNDYM_3470	COG0584	glycerophosphoryl diester phosphodiesterase
UNDYM_3472	COG1804	L-carnitine dehydratase bile acid-inducible protein F
UNDYM_3473	COG3275	phosphorelay sensor kinase activity
UNDYM_3475	COG2153	protein acetylation
UNDYM_3477	COG3590	peptidase
UNDYM_3480	COG0318	PFAM AMP-dependent synthetase and ligase
UNDYM_3486	COG4941	Belongs to the sigma-70 factor family
UNDYM_3488	COG2764	glyoxalase bleomycin resistance protein dioxygenase
UNDYM_3489	COG3795	YCII-related domain
UNDYM_3494	COG1741	Belongs to the pirin family
UNDYM_3495	COG0583	DNA-binding transcription factor activity
UNDYM_3496	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
UNDYM_3497	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
UNDYM_3504	COG1279	arginine transmembrane transporter activity
UNDYM_3506	COG5001	Diguanylate cyclase
UNDYM_3506	COG4251	negative regulation of phosphorylation
UNDYM_3506	COG3706	GGDEF domain
UNDYM_3506	COG2203	Gaf domain
UNDYM_3508	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
UNDYM_3509	COG0237	dephospho-CoA kinase activity
UNDYM_3514	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
UNDYM_3515	COG0459	protein refolding
UNDYM_3522	COG2085	NADP oxidoreductase coenzyme F420-dependent
UNDYM_3545	COG1024	Enoyl-CoA hydratase
UNDYM_3560	COG0123	including yeast histone deacetylase and acetoin utilization protein
UNDYM_3561	COG0714	Associated with various cellular activities
UNDYM_3565	COG2951	lytic endotransglycosylase activity
UNDYM_3569	COG0583	DNA-binding transcription factor activity
UNDYM_3570	COG3384	dioxygenase
UNDYM_3571	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
UNDYM_3573	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
UNDYM_3575	COG0776	regulation of translation
UNDYM_3577	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
UNDYM_3578	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
UNDYM_3579	COG0287	Prephenate dehydrogenase
UNDYM_3580	COG0077	Prephenate dehydratase
UNDYM_3580	COG1605	Chorismate mutase
UNDYM_3581	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
UNDYM_3585	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
UNDYM_3593	COG2010	Cytochrome c
UNDYM_3596	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
UNDYM_3600	COG4264	IucA IucC family
UNDYM_3607	COG2091	lysine biosynthetic process via aminoadipic acid
UNDYM_3609	COG1366	Belongs to the anti-sigma-factor antagonist family
UNDYM_3610	COG1132	(ABC) transporter
UNDYM_3611	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
UNDYM_3612	COG0318	PFAM AMP-dependent synthetase and ligase
UNDYM_3613	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
UNDYM_3618	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
UNDYM_3623	COG2172	sigma factor antagonist activity
UNDYM_3624	COG2770	Histidine kinase
UNDYM_3624	COG2208	phosphoserine phosphatase activity
UNDYM_3625	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
UNDYM_3632	COG0583	DNA-binding transcription factor activity
UNDYM_3635	COG0583	DNA-binding transcription factor activity
UNDYM_3636	COG2015	COG2015, Alkyl sulfatase and related hydrolases
UNDYM_3643	COG1301	dicarboxylic acid transport
UNDYM_3645	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
UNDYM_3650	COG2271	Major facilitator Superfamily
UNDYM_3651	COG0826	peptidase U32
UNDYM_3660	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
UNDYM_3662	COG0840	transmembrane signaling receptor activity
UNDYM_3665	COG1968	undecaprenyl-diphosphatase activity
UNDYM_3666	COG0514	ATP-dependent DNA helicase (RecQ)
UNDYM_3673	COG2378	regulation of single-species biofilm formation
UNDYM_3674	COG1609	Transcriptional regulator
UNDYM_3679	COG0737	Belongs to the 5'-nucleotidase family
UNDYM_3680	COG2010	Cytochrome c
UNDYM_3684	COG4654	Cytochrome c, class I
UNDYM_3685	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
UNDYM_3688	COG0583	DNA-binding transcription factor activity
UNDYM_3693	COG4430	Bacteriocin-protection, YdeI or OmpD-Associated
UNDYM_3701	COG0492	ferredoxin-NADP+ reductase activity
UNDYM_3706	COG2076	Multidrug Resistance protein
UNDYM_3712	COG1131	(ABC) transporter
UNDYM_3717	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
UNDYM_3743	COG1783	phage Terminase large subunit
UNDYM_3746	COG5002	protein histidine kinase activity
UNDYM_3748	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
UNDYM_3749	COG1629	transport
UNDYM_3749	COG4771	TonB-dependent receptor
UNDYM_3750	COG3720	iron ion transport
UNDYM_3751	COG4558	Periplasmic binding protein
UNDYM_3752	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
UNDYM_3753	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
UNDYM_3758	COG0583	DNA-binding transcription factor activity
UNDYM_3759	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
UNDYM_3763	COG3383	formate dehydrogenase (NAD+) activity
UNDYM_3768	COG1960	acyl-CoA dehydrogenase activity
UNDYM_3769	COG1024	Enoyl-CoA hydratase
UNDYM_3772	COG3447	MASE1 domain protein
UNDYM_3772	COG5001	Diguanylate cyclase
UNDYM_3772	COG5002	protein histidine kinase activity
UNDYM_3787	COG0251	oxidation-reduction process
UNDYM_3791	COG0840	transmembrane signaling receptor activity
UNDYM_3792	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
UNDYM_3796	COG0840	transmembrane signaling receptor activity
UNDYM_3802	COG0835	chemotaxis
UNDYM_3803	COG0840	transmembrane signaling receptor activity
UNDYM_3804	COG0840	transmembrane signaling receptor activity
UNDYM_3805	COG1228	amidohydrolase
UNDYM_3809	COG0815	Transfers the fatty acyl group on membrane lipoproteins
UNDYM_3818	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
UNDYM_3819	COG1702	phosphate starvation-inducible protein PhoH
UNDYM_3820	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
UNDYM_3822	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
UNDYM_3829	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
UNDYM_3838	COG0477	Major facilitator Superfamily
UNDYM_3847	COG1196	nuclear chromosome segregation
UNDYM_3859	COG1077	Cell shape determining protein MreB Mrl
UNDYM_3861	COG0009	L-threonylcarbamoyladenylate synthase
UNDYM_3862	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
UNDYM_3863	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
UNDYM_3864	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
UNDYM_3867	COG0126	phosphoglycerate kinase activity
UNDYM_3873	COG0429	hydrolase of the alpha beta-hydrolase fold
UNDYM_3881	COG1752	Esterase of the alpha-beta hydrolase superfamily
UNDYM_3890	COG4783	chaperone-mediated protein folding
UNDYM_3891	COG0315	cyclic pyranopterin monophosphate synthase activity
UNDYM_3905	COG3307	-O-antigen
UNDYM_3920	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
UNDYM_3922	COG1028	Short-chain dehydrogenase reductase Sdr
UNDYM_3927	COG4106	trans-aconitate 2-methyltransferase activity
UNDYM_3937	COG0583	DNA-binding transcription factor activity
UNDYM_3944	COG0702	epimerase
UNDYM_3946	COG2814	Major facilitator Superfamily
UNDYM_3948	COG0583	DNA-binding transcription factor activity
UNDYM_3949	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
UNDYM_3950	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
UNDYM_3953	COG0492	ferredoxin-NADP+ reductase activity
UNDYM_3955	COG1247	-acetyltransferase
UNDYM_3977	COG1942	4-Oxalocrotonate Tautomerase
UNDYM_3979	COG0583	DNA-binding transcription factor activity
UNDYM_3988	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
UNDYM_3990	COG4122	O-methyltransferase activity
UNDYM_3993	COG0823	Involved in the tonB-independent uptake of proteins
UNDYM_3997	COG2941	Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol
UNDYM_4000	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
UNDYM_4004	COG1125	glycine betaine transport
UNDYM_4004	COG0517	IMP dehydrogenase activity
UNDYM_4011	COG1595	DNA-templated transcription, initiation
UNDYM_4013	COG0531	amino acid
UNDYM_4014	COG4303	Ethanolamine ammonia lyase large subunit
UNDYM_4015	COG4302	ethanolamine ammonia-lyase activity
UNDYM_4022	COG1162	GTPase activity
UNDYM_4027	COG3038	cytochrome b561
UNDYM_4033	COG0671	phosphoesterase, PA-phosphatase related
UNDYM_4052	COG0024	Methionine aminopeptidase
UNDYM_4054	COG0784	Response regulator, receiver
UNDYM_4056	COG4251	negative regulation of phosphorylation
UNDYM_4057	COG4191	Histidine kinase
UNDYM_4066	COG0793	Belongs to the peptidase S41A family
UNDYM_4067	COG0840	transmembrane signaling receptor activity
UNDYM_4068	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
UNDYM_4071	COG4533	DNA binding
UNDYM_4079	COG0583	DNA-binding transcription factor activity
UNDYM_4080	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
UNDYM_4088	COG2207	Transcriptional regulator
UNDYM_4091	COG3608	succinylglutamate desuccinylase aspartoacylase
UNDYM_4091	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
UNDYM_4095	COG4628	conserved protein (DUF2132)
UNDYM_4111	COG1943	Transposase
UNDYM_4125	COG2205	protein histidine kinase activity
UNDYM_4125	COG4999	Histidine kinase
UNDYM_4125	COG3437	response regulator, receiver
UNDYM_4125	COG3850	Histidine kinase
UNDYM_4132	COG0583	DNA-binding transcription factor activity
UNDYM_4135	COG1473	amidohydrolase
UNDYM_4136	COG1473	amidohydrolase
UNDYM_4138	COG1522	sequence-specific DNA binding
UNDYM_4139	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
UNDYM_4140	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
UNDYM_4143	COG1280	lysine exporter protein (LysE YggA)
UNDYM_4148	COG1131	(ABC) transporter
UNDYM_4150	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
UNDYM_4151	COG1063	alcohol dehydrogenase
UNDYM_4153	COG0017	Asparaginyl-tRNA synthetase
UNDYM_4170	COG2995	paraquat-inducible protein a
UNDYM_4171	COG2995	paraquat-inducible protein a
UNDYM_4172	COG3008	intermembrane lipid transfer
UNDYM_4172	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
UNDYM_4178	COG1943	Transposase
UNDYM_4212	COG0629	single-stranded DNA binding
UNDYM_4227	COG0583	DNA-binding transcription factor activity
UNDYM_4230	COG0277	FAD linked oxidase domain protein
UNDYM_4234	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
UNDYM_4234	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
UNDYM_4236	COG0840	transmembrane signaling receptor activity
UNDYM_4240	COG0583	DNA-binding transcription factor activity
UNDYM_4245	COG1301	dicarboxylic acid transport
UNDYM_4249	COG0583	DNA-binding transcription factor activity
UNDYM_4266	COG0667	Aldo Keto reductase
UNDYM_4268	COG0523	cobalamin synthesis protein
UNDYM_4270	COG1136	(ABC) transporter
UNDYM_4278	COG2207	Transcriptional regulator
UNDYM_4281	COG1917	Cupin 2, conserved barrel domain protein
UNDYM_4281	COG2207	Transcriptional regulator
UNDYM_4295	COG0583	DNA-binding transcription factor activity
UNDYM_4296	COG2814	Major facilitator Superfamily
UNDYM_4305	COG1764	response to oxidative stress
UNDYM_4306	COG0596	Alpha beta hydrolase
UNDYM_4307	COG1846	Transcriptional regulator
UNDYM_4315	COG0483	inositol monophosphate 1-phosphatase activity
UNDYM_4319	COG0583	DNA-binding transcription factor activity
UNDYM_4326	COG0662	Cupin 2, conserved barrel domain protein
UNDYM_4329	COG1802	Transcriptional regulator
UNDYM_4331	COG0626	cystathionine gamma-synthase activity
UNDYM_4336	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
UNDYM_4343	COG0583	DNA-binding transcription factor activity
UNDYM_4351	COG1522	sequence-specific DNA binding
UNDYM_4354	COG1028	Short-chain dehydrogenase reductase Sdr
UNDYM_4355	COG2207	Transcriptional regulator
UNDYM_4366	COG2982	Protein involved in outer membrane biogenesis
UNDYM_4369	COG3218	ABC-type transport auxiliary lipoprotein component
UNDYM_4371	COG1127	ABC transporter
UNDYM_4372	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
UNDYM_4374	COG1295	ribonuclease BN
UNDYM_4381	COG0387	Pfam Sodium calcium exchanger
UNDYM_4384	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
UNDYM_4385	COG0583	DNA-binding transcription factor activity
UNDYM_4386	COG1301	dicarboxylic acid transport
UNDYM_4392	COG0114	fumarate hydratase activity
UNDYM_4404	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
UNDYM_4414	COG2814	Major facilitator Superfamily
UNDYM_4415	COG0583	DNA-binding transcription factor activity
UNDYM_4421	COG1770	oligopeptidase
UNDYM_4424	COG1028	Short-chain dehydrogenase reductase Sdr
UNDYM_4425	COG2207	Transcriptional regulator
UNDYM_4429	COG4677	pectinesterase activity
UNDYM_4433	COG3119	arylsulfatase activity
UNDYM_4435	COG0583	DNA-binding transcription factor activity
UNDYM_4438	COG3719	Belongs to the RNase T2 family
UNDYM_4440	COG4191	Histidine kinase
UNDYM_4444	COG0745	RESPONSE REGULATOR receiver
UNDYM_4445	COG0840	transmembrane signaling receptor activity
UNDYM_4462	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
UNDYM_4463	COG2223	nitrite transmembrane transporter activity
UNDYM_4466	COG4771	TonB-dependent receptor
UNDYM_4487	COG1397	ADP-ribosylglycohydrolase
UNDYM_4493	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
UNDYM_4493	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
UNDYM_4494	COG1611	Belongs to the LOG family
UNDYM_4502	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
UNDYM_4503	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
UNDYM_4505	COG0557	exoribonuclease II activity
UNDYM_4506	COG3161	chorismate lyase activity
UNDYM_4507	COG3150	esterase
UNDYM_4508	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
UNDYM_4513	COG0501	Belongs to the peptidase M48B family
UNDYM_4514	COG4269	membrane
UNDYM_4516	COG2264	protein methyltransferase activity
UNDYM_4517	COG0439	Biotin carboxylase
UNDYM_4518	COG0511	ligase activity, forming carbon-carbon bonds
UNDYM_4519	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
UNDYM_4520	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
UNDYM_4525	COG1566	PFAM secretion protein HlyD family protein
UNDYM_4527	COG1846	Transcriptional regulator
UNDYM_4528	COG2199	diguanylate cyclase activity
UNDYM_4532	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
UNDYM_4535	COG3693	PFAM glycoside hydrolase, family 10
UNDYM_4555	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
UNDYM_4558	COG1280	lysine exporter protein (LysE YggA)
UNDYM_4564	COG0697	spore germination
UNDYM_4565	COG0778	Nitroreductase
UNDYM_4568	COG3046	protein related to deoxyribodipyrimidine photolyase
UNDYM_4570	COG0288	reversible hydration of carbon dioxide
UNDYM_4574	COG0625	glutathione transferase activity
UNDYM_4578	COG3842	ATPase activity
UNDYM_4579	COG4149	molybdate abc transporter
UNDYM_4580	COG0725	ABC transporter, periplasmic molybdate-binding protein
UNDYM_4586	COG0484	heat shock protein binding
UNDYM_4587	COG0443	Heat shock 70 kDa protein
UNDYM_4588	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
UNDYM_4592	COG1091	dTDP-4-dehydrorhamnose reductase activity
UNDYM_4594	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
UNDYM_4595	COG2244	polysaccharide biosynthetic process
UNDYM_4599	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
UNDYM_4602	COG0859	PFAM glycosyl transferase family 9
UNDYM_4607	COG2877	3-deoxy-8-phosphooctulonate synthase activity
UNDYM_4611	COG2205	protein histidine kinase activity
UNDYM_4611	COG0784	Response regulator, receiver
UNDYM_4611	COG5002	protein histidine kinase activity
UNDYM_4616	COG2132	Multicopper oxidase
UNDYM_4618	COG2223	nitrite transmembrane transporter activity
UNDYM_4619	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
UNDYM_4621	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
UNDYM_4622	COG2181	nitrate reductase activity
UNDYM_4623	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
UNDYM_4626	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
UNDYM_4627	COG0288	reversible hydration of carbon dioxide
UNDYM_4628	COG3850	Histidine kinase
UNDYM_4629	COG2197	response regulator
UNDYM_4630	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
UNDYM_4631	COG0826	peptidase U32
UNDYM_4632	COG0826	peptidase U32
UNDYM_4633	COG3154	lipid carrier protein
UNDYM_4639	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
UNDYM_4641	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
UNDYM_4642	COG0745	RESPONSE REGULATOR receiver
UNDYM_4643	COG5002	protein histidine kinase activity
UNDYM_4652	COG3250	beta-galactosidase activity
UNDYM_4653	COG5002	protein histidine kinase activity
UNDYM_4656	COG0431	NADPH-dependent FMN reductase
UNDYM_4665	COG0535	radical SAM domain protein
UNDYM_4667	COG2226	methyltransferase
UNDYM_4673	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
UNDYM_4678	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
UNDYM_4679	COG0741	lytic transglycosylase activity
UNDYM_4681	COG0617	tRNA 3'-terminal CCA addition
UNDYM_4683	COG1522	sequence-specific DNA binding
UNDYM_4685	COG3186	Phenylalanine-4-hydroxylase
UNDYM_4687	COG0745	RESPONSE REGULATOR receiver
UNDYM_4690	COG1280	lysine exporter protein (LysE YggA)
UNDYM_4692	COG1560	Kdo2-lipid A biosynthetic process
UNDYM_4694	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
UNDYM_4696	COG0583	DNA-binding transcription factor activity
UNDYM_4698	COG0412	Dienelactone hydrolase
UNDYM_4704	COG0697	spore germination
UNDYM_4709	COG1075	acetyltransferases and hydrolases with the alpha beta hydrolase fold
UNDYM_4715	COG1722	exodeoxyribonuclease VII activity
UNDYM_4716	COG0142	geranyltranstransferase activity
UNDYM_4718	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
UNDYM_4723	COG4689	acetoacetate decarboxylase
UNDYM_4724	COG1028	Short-chain dehydrogenase reductase Sdr
UNDYM_4728	COG2096	Adenosyltransferase
UNDYM_4730	COG0277	FAD linked oxidase domain protein
UNDYM_4731	COG0583	DNA-binding transcription factor activity
UNDYM_4733	COG4989	oxidoreductase activity
UNDYM_4737	COG0739	heme binding
UNDYM_4739	COG1490	D-aminoacyl-tRNA deacylase activity
UNDYM_4740	COG0406	alpha-ribazole phosphatase activity
UNDYM_4744	COG0640	Transcriptional regulator
UNDYM_4746	COG2972	Histidine kinase
UNDYM_4750	COG1252	NADH dehydrogenase
UNDYM_4751	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
UNDYM_4752	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
UNDYM_4753	COG0138	bifunctional purine biosynthesis protein purh
UNDYM_4755	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
UNDYM_4756	COG0632	four-way junction helicase activity
UNDYM_4757	COG2255	four-way junction helicase activity
UNDYM_4758	COG3971	2-oxopent-4-enoate hydratase activity
UNDYM_4762	COG0210	DNA helicase
UNDYM_4766	COG0352	thiamine-phosphate diphosphorylase activity
UNDYM_4767	COG0351	phosphomethylpyrimidine kinase
UNDYM_4768	COG2022	thiamine diphosphate biosynthetic process
UNDYM_4769	COG2852	Protein conserved in bacteria
UNDYM_4770	COG2104	thiamine diphosphate biosynthetic process
UNDYM_4771	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
UNDYM_4773	COG3706	GGDEF domain
UNDYM_4777	COG0525	valine-tRNA ligase activity
UNDYM_4783	COG0418	dihydroorotase activity
UNDYM_4786	COG1126	abc transporter atp-binding protein
UNDYM_4787	COG0765	amino acid transport
UNDYM_4788	COG0765	amino acid transport
UNDYM_4790	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
UNDYM_4791	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
UNDYM_4793	COG5265	(ABC) transporter
UNDYM_4796	COG1607	acyl-coa hydrolase
UNDYM_4797	COG3540	Alkaline phosphatase
UNDYM_4798	COG0318	PFAM AMP-dependent synthetase and ligase
UNDYM_4799	COG0243	molybdopterin cofactor binding
UNDYM_4800	COG2084	Dehydrogenase
UNDYM_4801	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
UNDYM_4803	COG1024	Enoyl-CoA hydratase
UNDYM_4804	COG1024	Enoyl-CoA hydratase
UNDYM_4806	COG2967	ApaG domain
UNDYM_4807	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
UNDYM_4808	COG0546	phosphoglycolate phosphatase activity
UNDYM_4811	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
UNDYM_4812	COG0134	indole-3-glycerol-phosphate synthase activity
UNDYM_4816	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
UNDYM_4816	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
UNDYM_4817	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
UNDYM_4818	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
UNDYM_4822	COG4521	taurine ABC transporter
UNDYM_4823	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
UNDYM_4824	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
UNDYM_4828	COG0584	glycerophosphoryl diester phosphodiesterase
UNDYM_4830	COG4185	zeta toxin
UNDYM_4832	COG1690	Belongs to the RtcB family
UNDYM_4833	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
UNDYM_4836	COG0628	permease
UNDYM_4838	COG0667	Aldo Keto reductase
UNDYM_4842	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
UNDYM_4843	COG2011	ABC-type metal ion transport system permease component
UNDYM_4844	COG1464	Belongs to the NlpA lipoprotein family
UNDYM_4847	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
UNDYM_4848	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
UNDYM_4849	COG1116	anion transmembrane transporter activity
UNDYM_4850	COG0850	regulation of cytokinetic process
UNDYM_4852	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
UNDYM_4853	COG0745	RESPONSE REGULATOR receiver
UNDYM_4855	COG2202	Pas domain
UNDYM_4855	COG2205	protein histidine kinase activity
UNDYM_4856	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
UNDYM_4857	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
UNDYM_4858	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
UNDYM_4859	COG2890	protein-(glutamine-N5) methyltransferase activity
UNDYM_4865	COG0529	Catalyzes the synthesis of activated sulfate
UNDYM_4873	COG1136	(ABC) transporter
UNDYM_4874	COG0577	efflux transmembrane transporter activity
UNDYM_4875	COG0577	efflux transmembrane transporter activity
UNDYM_4875	COG1136	(ABC) transporter
UNDYM_4877	COG5000	phosphorelay sensor kinase activity
UNDYM_4879	COG0745	RESPONSE REGULATOR receiver
UNDYM_4882	COG0488	(ABC) transporter
UNDYM_4883	COG3851	Histidine kinase
UNDYM_4884	COG2197	response regulator
UNDYM_4895	COG2183	response to ionizing radiation
UNDYM_4896	COG1012	belongs to the aldehyde dehydrogenase family
UNDYM_4898	COG3284	Transcriptional regulator
UNDYM_4899	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
UNDYM_4900	COG0163	prenyltransferase activity
UNDYM_4908	COG2969	positive regulation of protein catabolic process
UNDYM_4909	COG0625	glutathione transferase activity
UNDYM_4910	COG2857	Cytochrome c1
UNDYM_4911	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
UNDYM_4912	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
UNDYM_4913	COG0723	plastoquinol--plastocyanin reductase activity
UNDYM_4914	COG1970	mechanosensitive ion channel activity
UNDYM_4915	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
UNDYM_4918	COG0805	protein transport
UNDYM_4919	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
UNDYM_4920	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
UNDYM_4922	COG0140	phosphoribosyl-ATP diphosphatase activity
UNDYM_4923	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
UNDYM_4924	COG0107	imidazoleglycerol-phosphate synthase activity
UNDYM_4925	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
UNDYM_4926	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
UNDYM_4927	COG0131	Imidazoleglycerol-phosphate dehydratase
UNDYM_4928	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
UNDYM_4930	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
UNDYM_4931	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
UNDYM_4932	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
UNDYM_4933	COG0271	Belongs to the BolA IbaG family
UNDYM_4934	COG0842	Transport permease protein
UNDYM_4935	COG1131	(ABC) transporter
UNDYM_4939	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
UNDYM_4940	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
UNDYM_4941	COG1127	ABC transporter
UNDYM_4943	COG0067	glutamate synthase
UNDYM_4943	COG0070	glutamate synthase
UNDYM_4943	COG0069	glutamate synthase activity
UNDYM_4946	COG3221	ABC-type phosphate phosphonate transport system periplasmic component
UNDYM_4949	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
UNDYM_4950	COG1609	Transcriptional regulator
UNDYM_4952	COG4771	TonB-dependent receptor
UNDYM_4954	COG0513	Belongs to the DEAD box helicase family
UNDYM_4957	COG0629	single-stranded DNA binding
UNDYM_4958	COG2814	Major facilitator Superfamily
UNDYM_4960	COG0193	aminoacyl-tRNA hydrolase activity
UNDYM_4966	COG2814	Major facilitator Superfamily
UNDYM_4968	COG4533	DNA binding
UNDYM_4971	COG0012	GTP binding
UNDYM_4973	COG1609	Transcriptional regulator
UNDYM_4975	COG4977	sequence-specific DNA binding
UNDYM_4978	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
UNDYM_4979	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
UNDYM_4980	COG0742	ribosomal rna small subunit methyltransferase
UNDYM_4982	COG2884	Cell division ATP-binding protein ftsE
UNDYM_4984	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
UNDYM_4985	COG1999	signal sequence binding
UNDYM_4986	COG0109	protoheme IX farnesyltransferase activity
UNDYM_4987	COG1612	heme a metabolic process
UNDYM_4993	COG3175	Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I
UNDYM_4994	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
UNDYM_4997	COG2226	methyltransferase
UNDYM_5000	COG5001	Diguanylate cyclase
UNDYM_5001	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
UNDYM_5003	COG0583	DNA-binding transcription factor activity
UNDYM_5004	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
UNDYM_5005	COG4208	sulfate ABC transporter
UNDYM_5006	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
UNDYM_5008	COG3585	molybdate ion transport
UNDYM_5009	COG1116	anion transmembrane transporter activity
UNDYM_5010	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
UNDYM_5011	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
UNDYM_5012	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
UNDYM_5013	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
UNDYM_5014	COG0431	NADPH-dependent FMN reductase
UNDYM_5015	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
UNDYM_5017	COG1414	Transcriptional regulator
UNDYM_5022	COG3380	Catalyzes the oxidation of the 1,2-dihydro- and 1,6- dihydro- isomeric forms of beta-NAD(P) back to beta-NAD(P) . May serve to protect primary metabolism dehydrogenases from inhibition by the 1,2-dihydro- and 1,6-dihydro-beta-NAD(P) isomers
UNDYM_5024	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
UNDYM_5027	COG1028	Short-chain dehydrogenase reductase Sdr
UNDYM_5032	COG0776	regulation of translation
UNDYM_5063	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
UNDYM_5090	COG2194	sulfuric ester hydrolase activity
UNDYM_5094	COG0446	pyridine nucleotide-disulphide oxidoreductase
UNDYM_5094	COG1902	pentaerythritol trinitrate reductase activity
UNDYM_5097	COG1764	response to oxidative stress
UNDYM_5098	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
UNDYM_5103	COG0683	leucine binding
UNDYM_5108	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
UNDYM_5113	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
UNDYM_5115	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
UNDYM_5117	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
UNDYM_5118	COG3454	Phosphonate metabolism
UNDYM_5120	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
UNDYM_5121	COG3709	Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP)
UNDYM_5122	COG0583	DNA-binding transcription factor activity
UNDYM_5123	COG2910	NAD(P)H-binding
UNDYM_5124	COG2814	Major facilitator Superfamily
UNDYM_5127	COG1032	radical SAM domain protein
UNDYM_5128	COG1804	L-carnitine dehydratase bile acid-inducible protein F
UNDYM_5131	COG3655	Transcriptional regulator
UNDYM_5140	COG1278	Cold shock
UNDYM_5146	COG1116	anion transmembrane transporter activity
UNDYM_5154	COG0583	DNA-binding transcription factor activity
UNDYM_5155	COG1335	isochorismatase
UNDYM_5156	COG1228	amidohydrolase
UNDYM_5169	COG2363	Small membrane protein
UNDYM_5173	COG0840	transmembrane signaling receptor activity
UNDYM_5174	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
UNDYM_5176	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
UNDYM_5180	COG0523	cobalamin synthesis protein
UNDYM_5183	COG4206	TonB-dependent receptor
UNDYM_5185	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
UNDYM_5186	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
UNDYM_5188	COG1956	GAF domain-containing protein
UNDYM_5191	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
UNDYM_5193	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
UNDYM_5196	COG0588	phosphoglycerate mutase activity
UNDYM_5197	COG4942	peptidase
UNDYM_5198	COG0793	Belongs to the peptidase S41A family
UNDYM_5199	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
UNDYM_5200	COG0625	glutathione transferase activity
UNDYM_5201	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
UNDYM_5202	COG3552	Protein containing von Willebrand factor type A (VWA) domain
UNDYM_5204	COG0714	Associated with various cellular activities
UNDYM_5210	COG0411	ABC transporter
UNDYM_5213	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
UNDYM_5214	COG5002	protein histidine kinase activity
UNDYM_5214	COG3447	MASE1 domain protein
UNDYM_5214	COG5001	Diguanylate cyclase
UNDYM_5219	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
UNDYM_5220	COG1595	DNA-templated transcription, initiation
UNDYM_5223	COG0302	gtp cyclohydrolase
UNDYM_5226	COG1704	LemA family
UNDYM_5227	COG2823	Periplasmic or secreted lipoprotein
UNDYM_5228	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
UNDYM_5229	COG0792	nuclease activity
UNDYM_5232	COG0772	Belongs to the SEDS family
UNDYM_5233	COG0768	penicillin binding
UNDYM_5236	COG1792	Involved in formation and maintenance of cell shape
UNDYM_5237	COG1077	Cell shape determining protein MreB Mrl
UNDYM_5238	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
UNDYM_5239	COG0154	amidase activity
UNDYM_5240	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
UNDYM_5244	COG0438	transferase activity, transferring glycosyl groups
UNDYM_5248	COG2226	methyltransferase
UNDYM_5254	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
UNDYM_5255	COG1696	Membrane protein involved in D-alanine export
UNDYM_5257	COG0438	transferase activity, transferring glycosyl groups
UNDYM_5259	COG0662	Cupin 2, conserved barrel domain protein
UNDYM_5259	COG0836	Belongs to the mannose-6-phosphate isomerase type 2 family
UNDYM_5263	COG0438	transferase activity, transferring glycosyl groups
UNDYM_5265	COG1089	Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
UNDYM_5266	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
UNDYM_5267	COG0438	transferase activity, transferring glycosyl groups
UNDYM_5269	COG0708	Exodeoxyribonuclease III
UNDYM_5270	COG0737	Belongs to the 5'-nucleotidase family
UNDYM_5274	COG2813	Specifically methylates the guanine in position
UNDYM_5274	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
UNDYM_5275	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
UNDYM_5276	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
UNDYM_5280	COG0189	ligase activity
UNDYM_5282	COG2329	Antibiotic biosynthesis monooxygenase
UNDYM_5284	COG3788	relative of glutathione S-transferase, MAPEG superfamily
UNDYM_5286	COG3706	GGDEF domain
UNDYM_5288	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
UNDYM_5303	COG1024	Enoyl-CoA hydratase
UNDYM_5308	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
UNDYM_5321	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
UNDYM_5323	COG0577	efflux transmembrane transporter activity
UNDYM_5323	COG1136	(ABC) transporter
UNDYM_5324	COG1136	(ABC) transporter
UNDYM_5324	COG0577	efflux transmembrane transporter activity
UNDYM_5325	COG1566	PFAM secretion protein HlyD family protein
UNDYM_5327	COG1131	(ABC) transporter
UNDYM_5332	COG2918	glutathione biosynthetic process
UNDYM_5335	COG1335	isochorismatase
UNDYM_5339	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
UNDYM_5346	COG1942	4-Oxalocrotonate Tautomerase
UNDYM_5349	COG4301	Catalyzes the SAM-dependent triple methylation of the alpha-amino group of histidine to form hercynine, a step in the biosynthesis pathway of ergothioneine
UNDYM_5350	COG1262	PFAM Formylglycine-generating sulfatase enzyme
UNDYM_5358	COG3852	Histidine kinase
UNDYM_5363	COG0784	Response regulator, receiver
UNDYM_5363	COG2198	Histidine kinase
UNDYM_5363	COG0643	Histidine kinase
UNDYM_5364	COG0840	transmembrane signaling receptor activity
UNDYM_5365	COG0835	chemotaxis
UNDYM_5367	COG0745	RESPONSE REGULATOR receiver
UNDYM_5370	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
UNDYM_5371	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
UNDYM_5372	COG0156	8-amino-7-oxononanoate synthase activity
UNDYM_5375	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
UNDYM_5376	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
UNDYM_5379	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
UNDYM_5380	COG3012	SEC-C Motif Domain Protein
UNDYM_5382	COG1960	acyl-CoA dehydrogenase activity
UNDYM_5383	COG1028	Short-chain dehydrogenase reductase Sdr
UNDYM_5384	COG0183	Belongs to the thiolase family
UNDYM_5385	COG4579	[isocitrate dehydrogenase (NADP+)] phosphatase activity
UNDYM_5387	COG1960	acyl-CoA dehydrogenase activity
UNDYM_5397	COG1595	DNA-templated transcription, initiation
UNDYM_5400	COG0366	Alpha amylase catalytic
UNDYM_5402	COG0697	spore germination
UNDYM_5406	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
UNDYM_5407	COG0300	oxidoreductase activity
UNDYM_5408	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
UNDYM_5410	COG0018	arginyl-trna synthetase
UNDYM_5412	COG2974	May be involved in recombination
UNDYM_5415	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
UNDYM_5415	COG0551	DNA topoisomerase type I activity
UNDYM_5416	COG2922	Belongs to the Smg family
UNDYM_5417	COG0758	DNA mediated transformation
UNDYM_5419	COG0242	peptide deformylase activity
UNDYM_5420	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
UNDYM_5423	COG0583	DNA-binding transcription factor activity
UNDYM_5425	COG0861	Integral membrane protein TerC family
UNDYM_5445	COG2059	Chromate
UNDYM_5450	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
UNDYM_5451	COG1301	dicarboxylic acid transport
UNDYM_5453	COG1253	flavin adenine dinucleotide binding
UNDYM_5454	COG0443	Heat shock 70 kDa protein
UNDYM_5457	COG0745	RESPONSE REGULATOR receiver
UNDYM_5461	COG0318	PFAM AMP-dependent synthetase and ligase
UNDYM_5469	COG0840	transmembrane signaling receptor activity
UNDYM_5472	COG2124	cytochrome p450
UNDYM_5475	COG1942	4-Oxalocrotonate Tautomerase
UNDYM_5476	COG0402	S-adenosylhomocysteine deaminase activity
UNDYM_5478	COG1529	Aldehyde oxidase and xanthine dehydrogenase
UNDYM_5481	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
UNDYM_5486	COG0515	serine threonine protein kinase
UNDYM_5486	COG2815	serine threonine protein kinase
UNDYM_5489	COG1280	lysine exporter protein (LysE YggA)
UNDYM_5493	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
UNDYM_5494	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
UNDYM_5496	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
UNDYM_5498	COG2326	polyphosphate kinase activity
UNDYM_5503	COG0355	proton-transporting ATP synthase activity, rotational mechanism
UNDYM_5504	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
UNDYM_5505	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
UNDYM_5506	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
UNDYM_5507	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
UNDYM_5508	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
UNDYM_5510	COG0356	it plays a direct role in the translocation of protons across the membrane
UNDYM_5513	COG1475	DNA binding
UNDYM_5514	COG1192	Involved in chromosome partitioning
UNDYM_5515	COG0357	Ribosomal RNA small subunit methyltransferase G
UNDYM_5516	COG0445	tRNA wobble uridine modification
UNDYM_5519	COG1454	alcohol dehydrogenase
UNDYM_5525	COG1172	Belongs to the binding-protein-dependent transport system permease family
UNDYM_5526	COG0559	Belongs to the binding-protein-dependent transport system permease family
UNDYM_5529	COG0411	ABC transporter
UNDYM_5533	COG0583	DNA-binding transcription factor activity
UNDYM_5538	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
UNDYM_5544	COG1819	glycosyl
UNDYM_5546	COG2814	Major facilitator Superfamily
UNDYM_5548	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
UNDYM_5548	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
UNDYM_5548	COG0506	proline dehydrogenase activity
UNDYM_5549	COG1522	sequence-specific DNA binding
UNDYM_5550	COG1280	lysine exporter protein (LysE YggA)
UNDYM_5552	COG1022	Amp-dependent synthetase and ligase
UNDYM_5558	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
UNDYM_5560	COG3275	phosphorelay sensor kinase activity
UNDYM_5564	COG2972	Histidine kinase
UNDYM_5564	COG0745	RESPONSE REGULATOR receiver
UNDYM_5565	COG3279	Response regulator of the LytR AlgR family
UNDYM_5567	COG4977	sequence-specific DNA binding
UNDYM_5573	COG4953	penicillin-binding protein 1C
UNDYM_5574	COG2373	Large extracellular alpha-helical protein
UNDYM_5578	COG0307	riboflavin synthase, alpha
UNDYM_5579	COG2202	Pas domain
UNDYM_5579	COG2205	protein histidine kinase activity
UNDYM_5584	COG1274	phosphoenolpyruvate carboxykinase (GTP) activity
UNDYM_5585	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
UNDYM_5588	COG5001	Diguanylate cyclase
UNDYM_5588	COG3300	MHYT domain
UNDYM_5597	COG2375	cellular response to nickel ion
UNDYM_5598	COG0583	DNA-binding transcription factor activity
UNDYM_5599	COG4948	Mandelate Racemase Muconate Lactonizing
UNDYM_5602	COG0436	Aminotransferase
UNDYM_5606	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
UNDYM_5607	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
UNDYM_5608	COG2156	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
UNDYM_5609	COG2205	protein histidine kinase activity
UNDYM_5610	COG0745	RESPONSE REGULATOR receiver
UNDYM_5614	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
UNDYM_5616	COG2205	protein histidine kinase activity
UNDYM_5616	COG0784	Response regulator, receiver
UNDYM_5617	COG3842	ATPase activity
UNDYM_5622	COG0840	transmembrane signaling receptor activity
UNDYM_5624	COG0642	Histidine kinase
UNDYM_5636	COG2900	Belongs to the SlyX family
UNDYM_5638	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
UNDYM_5642	COG2351	hydroxyisourate hydrolase activity
UNDYM_5644	COG2233	PERMEase
UNDYM_5655	COG2972	Histidine kinase
UNDYM_5657	COG0124	histidyl-tRNA synthetase
UNDYM_5659	COG3291	Pkd domain containing protein
UNDYM_5661	COG0469	pyruvate kinase activity
UNDYM_5663	COG2084	Dehydrogenase
UNDYM_5664	COG3622	Belongs to the hyi family
UNDYM_5665	COG3960	tartronate-semialdehyde synthase activity
UNDYM_5666	COG0583	DNA-binding transcription factor activity
UNDYM_5667	COG2252	PERMEase
UNDYM_5672	COG0583	DNA-binding transcription factor activity
UNDYM_5675	COG2162	N-hydroxyarylamine O-acetyltransferase activity
UNDYM_5677	COG0513	Belongs to the DEAD box helicase family
UNDYM_5681	COG2207	Transcriptional regulator
UNDYM_5685	COG4990	cell redox homeostasis
UNDYM_5685	COG3591	Belongs to the peptidase S1B family
UNDYM_5692	COG0784	Response regulator, receiver
UNDYM_5693	COG2205	protein histidine kinase activity
UNDYM_5693	COG2202	Pas domain
UNDYM_5695	COG3437	response regulator, receiver
UNDYM_5700	COG2931	calcium- and calmodulin-responsive adenylate cyclase activity
UNDYM_5708	COG0612	Peptidase, M16
UNDYM_5711	COG0154	amidase activity
UNDYM_5714	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
UNDYM_5716	COG5002	protein histidine kinase activity
UNDYM_5718	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
UNDYM_5720	COG0612	Peptidase, M16
UNDYM_5722	COG4206	TonB-dependent receptor
UNDYM_5726	COG4771	TonB-dependent receptor
UNDYM_5727	COG0840	transmembrane signaling receptor activity
UNDYM_5729	COG2223	nitrite transmembrane transporter activity
UNDYM_5731	COG2207	Transcriptional regulator
UNDYM_5732	COG0339	signal peptide processing
UNDYM_5734	COG2271	Major facilitator Superfamily
UNDYM_5737	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
UNDYM_5740	COG3119	arylsulfatase activity
UNDYM_5742	COG0183	Belongs to the thiolase family
UNDYM_5745	COG1506	peptidase
UNDYM_5755	COG3104	oligopeptide transport
UNDYM_5758	COG0840	transmembrane signaling receptor activity
UNDYM_5762	COG0745	RESPONSE REGULATOR receiver
UNDYM_5764	COG2972	Histidine kinase
UNDYM_5766	COG0084	hydrolase, TatD family'
UNDYM_5776	COG0747	negative chemotaxis
UNDYM_5780	COG1028	Short-chain dehydrogenase reductase Sdr
UNDYM_5781	COG0376	Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
UNDYM_5784	COG1846	Transcriptional regulator
UNDYM_5786	COG0515	serine threonine protein kinase
UNDYM_5790	COG1309	transcriptional regulator
UNDYM_5791	COG1902	pentaerythritol trinitrate reductase activity
UNDYM_5802	COG4260	virion core protein, lumpy skin disease virus
UNDYM_5806	COG3132	Protein of unknown function, DUF480
UNDYM_5818	COG3541	Predicted nucleotidyltransferase
UNDYM_5819	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
UNDYM_5821	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
UNDYM_5822	COG3279	Response regulator of the LytR AlgR family
UNDYM_5823	COG3275	phosphorelay sensor kinase activity
UNDYM_5831	COG0739	heme binding
UNDYM_5833	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
UNDYM_5841	COG3279	Response regulator of the LytR AlgR family
UNDYM_5842	COG3590	peptidase
UNDYM_5846	COG2902	Dehydrogenase
UNDYM_5852	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
UNDYM_5856	COG0667	Aldo Keto reductase
UNDYM_5859	COG0583	DNA-binding transcription factor activity
UNDYM_5868	COG0415	Belongs to the DNA photolyase family
UNDYM_5869	COG0415	Belongs to the DNA photolyase family
UNDYM_5873	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
UNDYM_5877	COG0464	growth
UNDYM_5878	COG1404	Belongs to the peptidase S8 family
UNDYM_5880	COG0142	geranyltranstransferase activity
UNDYM_5881	COG0840	transmembrane signaling receptor activity
UNDYM_5882	COG0840	transmembrane signaling receptor activity
UNDYM_5887	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
UNDYM_5887	COG4191	Histidine kinase
UNDYM_5898	COG0121	glutamine amidotransferase
UNDYM_5904	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
UNDYM_5905	COG0706	membrane insertase activity
UNDYM_5906	COG0594	ribonuclease P activity
UNDYM_5907	COG0230	Belongs to the bacterial ribosomal protein bL34 family
UNDYM_5909	COG1475	DNA binding
UNDYM_5911	COG4372	Transposase
UNDYM_5929	COG4372	Transposase
UNDYM_5953	COG3550	peptidyl-serine autophosphorylation
UNDYM_5959	COG2226	methyltransferase
UNDYM_5976	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
UNDYM_5981	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
UNDYM_5982	COG1338	Plays a role in the flagellum-specific transport system
UNDYM_5986	COG1749	Flagellar hook protein flgE
UNDYM_5987	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
UNDYM_5990	COG1157	protein secretion by the type III secretion system
UNDYM_5993	COG1677	Flagellar hook-basal body complex protein FliE
UNDYM_5994	COG1558	bacterial-type flagellum-dependent cell motility
UNDYM_5995	COG1815	bacterial-type flagellum-dependent cell motility
UNDYM_5996	COG1706	bacterial-type flagellum-dependent cell motility
UNDYM_5997	COG1706	bacterial-type flagellum-dependent cell motility
UNDYM_5998	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
UNDYM_6001	COG1749	Flagellar hook protein flgE
UNDYM_6002	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
UNDYM_6003	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
UNDYM_6004	COG1684	flagellar biosynthetic protein fliR
UNDYM_6005	COG1987	bacterial-type flagellum assembly
UNDYM_6022	COG3550	peptidyl-serine autophosphorylation
UNDYM_t007	COG0237	dephospho-CoA kinase activity