locus-tag class description UPV_008 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain UPV_010 PF00231 ATP synthase UPV_013 PF00213 ATP synthase delta (OSCP) subunit UPV_014 PF00213 ATP synthase delta (OSCP) subunit UPV_016 PF00137 ATP synthase subunit C UPV_029 PF03960 ArsC family UPV_039 PF00224 Pyruvate kinase, barrel domain UPV_044 PF01588 Putative tRNA binding domain UPV_048 PF05496 Holliday junction DNA helicase RuvB P-loop domain UPV_048 PF12002 MgsA AAA+ ATPase C terminal UPV_048 PF16193 AAA C-terminal domain UPV_056 PF00312 Ribosomal protein S15 UPV_059 PF02734 DAK2 domain UPV_059 PF13684 Dihydroxyacetone kinase family UPV_065 PF00829 Ribosomal prokaryotic L21 protein UPV_074 PF01268 Formate--tetrahydrofolate ligase UPV_082 PF01632 Ribosomal protein L35 UPV_084 PF00338 Ribosomal protein S10p/S20e UPV_085 PF00297 Ribosomal protein L3 UPV_087 PF00276 Ribosomal protein L23 UPV_093 PF00831 Ribosomal L29 protein UPV_095 PF00238 Ribosomal protein L14p/L23e UPV_096 PF00467 KOW motif UPV_096 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 UPV_102 PF00333 Ribosomal protein S5, N-terminal domain UPV_102 PF03719 Ribosomal protein S5, C-terminal domain UPV_103 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A UPV_107 PF01176 Translation initiation factor 1A / IF-1 UPV_108 PF00444 Ribosomal protein L36 UPV_109 PF00416 Ribosomal protein S13/S18 UPV_116 PF09186 Domain of unknown function (DUF1949) UPV_116 PF01205 Uncharacterized protein family UPF0029 UPV_119 PF03672 Uncharacterised protein family (UPF0154) UPV_120 PF01926 50S ribosome-binding GTPase UPV_122 PF00588 SpoU rRNA Methylase family UPV_126 PF01230 HIT domain UPV_132 PF01165 Ribosomal protein S21 UPV_135 PF05343 M42 glutamyl aminopeptidase UPV_137 PF00216 Bacterial DNA-binding protein UPV_159 PF01261 Xylose isomerase-like TIM barrel UPV_163 PF01649 Ribosomal protein S20 UPV_165 PF00814 Glycoprotease family UPV_166 PF00849 RNA pseudouridylate synthase UPV_166 PF01479 S4 domain UPV_177 PF00679 Elongation factor G C-terminus UPV_177 PF00009 Elongation factor Tu GTP binding domain UPV_177 PF03144 Elongation factor Tu domain 2 UPV_177 PF06421 GTP-binding protein LepA C-terminus UPV_180 PF08032 RNA 2'-O ribose methyltransferase substrate binding UPV_180 PF00588 SpoU rRNA Methylase family UPV_187 PF01783 Ribosomal L32p protein family UPV_191 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain UPV_191 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain UPV_196 PF02224 Cytidylate kinase UPV_199 PF02616 Segregation and condensation protein ScpA UPV_209 PF06574 FAD synthetase UPV_209 PF01687 Riboflavin kinase UPV_225 PF03652 Holliday junction resolvase UPV_234 PF07198 Protein of unknown function (DUF1410) UPV_243 PF02381 MraZ protein, putative antitoxin-like UPV_265 PF01025 GrpE UPV_266 PF00226 DnaJ domain UPV_266 PF01556 DnaJ C terminal domain UPV_266 PF00684 DnaJ central domain UPV_277 PF02926 THUMP domain UPV_277 PF02568 Thiamine biosynthesis protein (ThiI) UPV_291 PF05194 UreE urease accessory protein, C-terminal domain UPV_291 PF02814 UreE urease accessory protein, N-terminal domain UPV_294 PF00547 Urease, gamma subunit UPV_296 PF01728 FtsJ-like methyltransferase UPV_296 PF01479 S4 domain UPV_306 PF05491 RuvB C-terminal winged helix domain UPV_306 PF05496 Holliday junction DNA helicase RuvB P-loop domain UPV_306 PF17864 RuvB AAA lid domain UPV_314 PF00834 Ribulose-phosphate 3 epimerase family UPV_318 PF02540 NAD synthase UPV_321 PF00551 Formyl transferase UPV_321 PF02911 Formyl transferase, C-terminal domain UPV_326 PF01926 50S ribosome-binding GTPase UPV_334 PF01420 Type I restriction modification DNA specificity domain UPV_335 PF01420 Type I restriction modification DNA specificity domain UPV_346 PF00156 Phosphoribosyl transferase domain UPV_348 PF02130 Uncharacterized protein family UPF0054 UPV_364 PF00550 Phosphopantetheine attachment site UPV_384 PF00164 Ribosomal protein S12/S23 UPV_392 PF00471 Ribosomal protein L33 UPV_399 PF00687 Ribosomal protein L1p/L10e family UPV_400 PF00298 Ribosomal protein L11, RNA binding domain UPV_400 PF03946 Ribosomal protein L11, N-terminal domain UPV_409 PF01281 Ribosomal protein L9, N-terminal domain UPV_409 PF03948 Ribosomal protein L9, C-terminal domain UPV_410 PF01084 Ribosomal protein S18 UPV_412 PF01250 Ribosomal protein S6 UPV_425 PF01245 Ribosomal protein L19 UPV_426 PF01746 tRNA (Guanine-1)-methyltransferase UPV_435 PF00380 Ribosomal protein S9/S16 UPV_461 PF00825 Ribonuclease P UPV_462 PF00468 Ribosomal protein L34 UPV_464 PF01197 Ribosomal protein L31 UPV_466 PF17827 PrmC N-terminal domain UPV_466 PF05175 Methyltransferase small domain UPV_468 PF02502 Ribose/Galactose Isomerase UPV_472 PF00466 Ribosomal protein L10 UPV_473 PF16320 Ribosomal protein L7/L12 dimerisation domain UPV_473 PF00542 Ribosomal protein L7/L12 C-terminal domain UPV_477 PF00005 ABC transporter UPV_479 PF01026 TatD related DNase UPV_480 PF01926 50S ribosome-binding GTPase UPV_480 PF10396 GTP-binding protein TrmE N-terminus UPV_480 PF12631 MnmE helical domain UPV_482 PF02223 Thymidylate kinase UPV_491 PF09371 Tex-like protein N-terminal domain UPV_491 PF17674 HHH domain UPV_491 PF16921 Tex protein YqgF-like domain UPV_491 PF00575 S1 RNA binding domain UPV_503 PF04193 PQ loop repeat UPV_504 PF04193 PQ loop repeat UPV_520 PF01668 SmpB protein UPV_530 PF00005 ABC transporter UPV_539 PF01195 Peptidyl-tRNA hydrolase UPV_540 PF02768 DNA polymerase III beta subunit, C-terminal domain UPV_540 PF00712 DNA polymerase III beta subunit, N-terminal domain UPV_546 PF01966 HD domain UPV_550 PF02575 YbaB/EbfC DNA-binding family UPV_554 PF00005 ABC transporter UPV_581 PF17757 UvrB interaction domain UPV_581 PF12344 Ultra-violet resistance protein B UPV_581 PF02151 UvrB/uvrC motif UPV_581 PF04851 Type III restriction enzyme, res subunit UPV_581 PF00271 Helicase conserved C-terminal domain