locus-tag class description UPA3_0002 IPR027491 Ribosomal protein L31 type A UPA3_0002 IPR002150 Ribosomal protein L31 UPA3_0002 IPR034704 L28p-like UPA3_0002 IPR042105 Ribosomal protein L31 superfamily UPA3_0004 IPR002052 DNA methylase, N-6 adenine-specific, conserved site UPA3_0004 IPR004556 Methyltransferase HemK-like UPA3_0004 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific UPA3_0004 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UPA3_0004 IPR007848 Methyltransferase small domain UPA3_0004 IPR040758 Release factor glutamine methyltransferase, N-terminal domain UPA3_0006 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily UPA3_0006 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family UPA3_0006 IPR011860 Ribose 5-phosphate isomerase B, Actinobacteria-type UPA3_0010 IPR022973 Ribosomal protein L10 UPA3_0010 IPR002363 Ribosomal protein L10, eubacterial, conserved site UPA3_0010 IPR001790 Ribosomal protein L10P UPA3_0011 IPR000206 Ribosomal protein L7/L12 UPA3_0011 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like UPA3_0011 IPR008932 Ribosomal protein L7/L12, oligomerisation UPA3_0011 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily UPA3_0011 IPR013823 Ribosomal protein L7/L12, C-terminal UPA3_0015 IPR003593 AAA+ ATPase domain UPA3_0015 IPR003439 ABC transporter-like UPA3_0015 IPR017871 ABC transporter, conserved site UPA3_0015 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPA3_0017 IPR001130 TatD family UPA3_0017 IPR018228 Deoxyribonuclease, TatD-related, conserved site UPA3_0017 IPR015991 Uncharacterised hydrolase TatD-type UPA3_0017 IPR032466 Metal-dependent hydrolase UPA3_0018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPA3_0018 IPR018948 GTP-binding protein TrmE, N-terminal UPA3_0018 IPR006073 GTP binding domain UPA3_0018 IPR004520 tRNA modification GTPase MnmE UPA3_0018 IPR027368 tRNA modification GTPase MnmE domain 2 UPA3_0018 IPR025867 MnmE, helical domain UPA3_0018 IPR031168 TrmE-type guanine nucleotide-binding domain UPA3_0018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 UPA3_0018 IPR005225 Small GTP-binding protein domain UPA3_0020 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPA3_0020 IPR018094 Thymidylate kinase UPA3_0020 IPR039430 Thymidylate kinase-like domain UPA3_0029 IPR010994 RuvA domain 2-like UPA3_0029 IPR022967 RNA-binding domain, S1 UPA3_0029 IPR003029 S1 domain UPA3_0029 IPR023323 Tex-like domain superfamily UPA3_0029 IPR012337 Ribonuclease H-like superfamily UPA3_0029 IPR012340 Nucleic acid-binding, OB-fold UPA3_0029 IPR041692 HHH domain 9 UPA3_0029 IPR023319 Tex-like protein, HTH domain superfamily UPA3_0029 IPR018974 Tex-like protein, N-terminal UPA3_0029 IPR032639 Tex protein, YqgF-like domain UPA3_0029 IPR006641 YqgF/RNase H-like domain UPA3_0029 IPR037027 YqgF/RNase H-like domain superfamily UPA3_0036 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UPA3_0036 IPR002052 DNA methylase, N-6 adenine-specific, conserved site UPA3_0036 IPR003356 DNA methylase, adenine-specific UPA3_0036 IPR025931 TaqI-like C-terminal specificity domain UPA3_0040 IPR006603 PQ-loop repeat UPA3_0041 IPR006603 PQ-loop repeat UPA3_0057 IPR020081 SsrA-binding protein, conserved site UPA3_0057 IPR000037 SsrA-binding protein UPA3_0057 IPR023620 Small protein B UPA3_0068 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPA3_0068 IPR017871 ABC transporter, conserved site UPA3_0068 IPR003593 AAA+ ATPase domain UPA3_0068 IPR003439 ABC transporter-like UPA3_0077 IPR001328 Peptidyl-tRNA hydrolase UPA3_0077 IPR018171 Peptidyl-tRNA hydrolase, conserved site UPA3_0077 IPR036416 Peptidyl-tRNA hydrolase superfamily UPA3_0078 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal UPA3_0078 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal UPA3_0078 IPR001001 DNA polymerase III, beta sliding clamp UPA3_0084 IPR017705 Ribonuclease Y UPA3_0084 IPR036612 K Homology domain, type 1 superfamily UPA3_0084 IPR003607 HD/PDEase domain UPA3_0084 IPR006675 HDIG domain UPA3_0084 IPR006674 HD domain UPA3_0088 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily UPA3_0088 IPR004401 Nucleoid-associated protein YbaB/EbfC family UPA3_0094 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPA3_0094 IPR017871 ABC transporter, conserved site UPA3_0094 IPR003439 ABC transporter-like UPA3_0094 IPR003593 AAA+ ATPase domain UPA3_0099 IPR000055 Restriction endonuclease, type I, HsdS UPA3_0100 IPR000055 Restriction endonuclease, type I, HsdS UPA3_0101 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UPA3_0101 IPR002052 DNA methylase, N-6 adenine-specific, conserved site UPA3_0101 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily UPA3_0101 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain UPA3_0101 IPR004546 Restriction endonuclease, type I, HsdM UPA3_0101 IPR003356 DNA methylase, adenine-specific UPA3_0115 IPR012337 Ribonuclease H-like superfamily UPA3_0115 IPR036397 Ribonuclease H superfamily UPA3_0122 IPR029057 Phosphoribosyltransferase-like UPA3_0122 IPR034332 Uracil phosphoribosyltransferase, bacterial-type UPA3_0122 IPR005765 Uracil phosphoribosyl transferase UPA3_0122 IPR000836 Phosphoribosyltransferase domain UPA3_0134 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit UPA3_0134 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal UPA3_0134 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal UPA3_0136 IPR000131 ATP synthase, F1 complex, gamma subunit UPA3_0136 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily UPA3_0139 IPR000711 ATPase, OSCP/delta subunit UPA3_0139 IPR020781 ATPase, OSCP/delta subunit, conserved site UPA3_0140 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily UPA3_0140 IPR000711 ATPase, OSCP/delta subunit UPA3_0142 IPR002379 V-ATPase proteolipid subunit C-like domain UPA3_0142 IPR035921 F/V-ATP synthase subunit C superfamily UPA3_0142 IPR000454 ATP synthase, F0 complex, subunit C UPA3_0142 IPR038662 F1F0 ATP synthase subunit C superfamily UPA3_0142 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site UPA3_0183 IPR006504 Transcriptional regulator Spx/MgsR UPA3_0183 IPR036249 Thioredoxin-like superfamily UPA3_0183 IPR006660 Arsenate reductase-like UPA3_0185 IPR036878 Glucose permease domain IIB UPA3_0185 IPR001996 Phosphotransferase system, IIB component, type 1 UPA3_0193 IPR001697 Pyruvate kinase UPA3_0193 IPR015806 Pyruvate kinase, insert domain superfamily UPA3_0193 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily UPA3_0193 IPR011037 Pyruvate kinase-like, insert domain superfamily UPA3_0193 IPR018209 Pyruvate kinase, active site UPA3_0193 IPR015793 Pyruvate kinase, barrel UPA3_0193 IPR036918 Pyruvate kinase, C-terminal domain superfamily UPA3_0193 IPR040442 Pyruvate kinase-like domain superfamily UPA3_0198 IPR033714 Phenylalanly tRNA synthetase, tRNA-binding-domain UPA3_0198 IPR037154 YtpR-like superfamily UPA3_0198 IPR002547 tRNA-binding domain UPA3_0198 IPR012340 Nucleic acid-binding, OB-fold UPA3_0202 IPR021886 MgsA AAA+ ATPase C-terminal UPA3_0202 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal UPA3_0202 IPR032423 AAA C-terminal domain UPA3_0202 IPR003593 AAA+ ATPase domain UPA3_0202 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPA3_0202 IPR008824 RuvB-like P-loop domain UPA3_0210 IPR009068 S15/NS1, RNA-binding UPA3_0210 IPR005290 Ribosomal protein S15, bacterial-type UPA3_0210 IPR000589 Ribosomal protein S15 UPA3_0213 IPR004007 DhaL domain UPA3_0213 IPR036117 DhaL domain superfamily UPA3_0213 IPR033470 Uncharacterised protein, DhaK domain UPA3_0213 IPR019986 DAK2 domain-containing protein YloV UPA3_0219 IPR018258 Ribosomal protein L21, conserved site UPA3_0219 IPR001787 Ribosomal protein L21 UPA3_0219 IPR028909 Ribosomal protein L21-like UPA3_0219 IPR036164 L21-like superfamily UPA3_0222 IPR015655 Protein phosphatase 2C family UPA3_0222 IPR036457 PPM-type phosphatase domain superfamily UPA3_0222 IPR001932 PPM-type phosphatase domain UPA3_0228 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPA3_0228 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site UPA3_0228 IPR000559 Formate-tetrahydrofolate ligase, FTHFS UPA3_0236 IPR037229 Ribosomal protein L35 superfamily UPA3_0236 IPR001706 Ribosomal protein L35, non-mitochondrial UPA3_0236 IPR018265 Ribosomal protein L35, conserved site UPA3_0236 IPR021137 Ribosomal protein L35 UPA3_0238 IPR027486 Ribosomal protein S10 domain UPA3_0238 IPR036838 Ribosomal protein S10 domain superfamily UPA3_0238 IPR001848 Ribosomal protein S10 UPA3_0239 IPR019927 Ribosomal protein L3, bacterial/organelle-type UPA3_0239 IPR000597 Ribosomal protein L3 UPA3_0239 IPR009000 Translation protein, beta-barrel domain superfamily UPA3_0239 IPR019926 Ribosomal protein L3, conserved site UPA3_0241 IPR013025 Ribosomal protein L25/L23 UPA3_0241 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily UPA3_0241 IPR012678 Ribosomal protein L23/L15e core domain superfamily UPA3_0247 IPR018254 Ribosomal protein L29, conserved site UPA3_0247 IPR036049 Ribosomal protein L29/L35 superfamily UPA3_0247 IPR001854 Ribosomal protein L29/L35 UPA3_0249 IPR000218 Ribosomal protein L14P UPA3_0249 IPR005745 Ribosomal protein L14P, bacterial-type UPA3_0249 IPR019972 Ribosomal protein L14P, conserved site UPA3_0249 IPR036853 Ribosomal protein L14 superfamily UPA3_0250 IPR005825 Ribosomal protein L24/L26, conserved site UPA3_0250 IPR014722 Ribosomal protein L2, domain 2 UPA3_0250 IPR041988 Ribosomal Protein L26/L24, KOW domain UPA3_0250 IPR008991 Translation protein SH3-like domain superfamily UPA3_0250 IPR005824 KOW UPA3_0250 IPR003256 Ribosomal protein L24 UPA3_0256 IPR018192 Ribosomal protein S5, N-terminal, conserved site UPA3_0256 IPR005324 Ribosomal protein S5, C-terminal UPA3_0256 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup UPA3_0256 IPR013810 Ribosomal protein S5, N-terminal UPA3_0256 IPR005712 Ribosomal protein S5, bacterial-type UPA3_0256 IPR000851 Ribosomal protein S5 UPA3_0256 IPR020568 Ribosomal protein S5 domain 2-type fold UPA3_0257 IPR036227 Ribosomal L18e/L15P superfamily UPA3_0257 IPR030878 Ribosomal protein L15 UPA3_0257 IPR005749 Ribosomal protein L15, bacterial-type UPA3_0257 IPR021131 Ribosomal protein L18e/L15P UPA3_0261 IPR012340 Nucleic acid-binding, OB-fold UPA3_0261 IPR006196 RNA-binding domain, S1, IF1 type UPA3_0261 IPR022967 RNA-binding domain, S1 UPA3_0261 IPR004368 Translation initiation factor IF-1 UPA3_0262 IPR035977 Ribosomal protein L36 superfamily UPA3_0262 IPR000473 Ribosomal protein L36 UPA3_0263 IPR010979 Ribosomal protein S13-like, H2TH UPA3_0263 IPR001892 Ribosomal protein S13 UPA3_0263 IPR019980 Ribosomal protein S13, bacterial-type UPA3_0263 IPR018269 Ribosomal protein S13, conserved site UPA3_0263 IPR027437 30s ribosomal protein S13, C-terminal UPA3_0270 IPR036956 Impact, N-terminal domain superfamily UPA3_0270 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site UPA3_0270 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal UPA3_0270 IPR035647 EF-G domain III/V-like UPA3_0270 IPR020568 Ribosomal protein S5 domain 2-type fold UPA3_0270 IPR001498 Impact, N-terminal UPA3_0270 IPR015796 Impact family, bacterial/archaeal UPA3_0270 IPR023582 Impact family UPA3_0273 IPR005359 Protein with unknown function UPF0154 UPA3_0274 IPR005225 Small GTP-binding protein domain UPA3_0274 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC UPA3_0274 IPR006073 GTP binding domain UPA3_0274 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPA3_0274 IPR030393 EngB-type guanine nucleotide-binding (G) domain UPA3_0276 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase UPA3_0276 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal UPA3_0276 IPR001537 tRNA/rRNA methyltransferase, SpoU type UPA3_0276 IPR029028 Alpha/beta knot methyltransferases UPA3_0281 IPR039384 HINT family UPA3_0281 IPR036265 HIT-like superfamily UPA3_0281 IPR011146 HIT-like domain UPA3_0281 IPR001310 Histidine triad (HIT) protein UPA3_0281 IPR019808 Histidine triad, conserved site UPA3_0287 IPR001911 Ribosomal protein S21 UPA3_0290 IPR008007 Peptidase M42 UPA3_0290 IPR023367 Peptidase M42, domain 2 UPA3_0292 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily UPA3_0292 IPR000119 Histone-like DNA-binding protein UPA3_0321 IPR036237 Xylose isomerase-like superfamily UPA3_0321 IPR018246 AP endonuclease 2, zinc binding site UPA3_0321 IPR013022 Xylose isomerase-like, TIM barrel domain UPA3_0321 IPR001719 AP endonuclease 2 UPA3_0325 IPR036510 Ribosomal protein S20 superfamily UPA3_0325 IPR002583 Ribosomal protein S20 UPA3_0327 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB UPA3_0327 IPR000905 Gcp-like domain UPA3_0328 IPR036986 RNA-binding S4 domain superfamily UPA3_0328 IPR006225 Pseudouridine synthase, RluC/RluD UPA3_0328 IPR006145 Pseudouridine synthase, RsuA/RluA UPA3_0328 IPR002942 RNA-binding S4 domain UPA3_0328 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site UPA3_0328 IPR020103 Pseudouridine synthase, catalytic domain superfamily UPA3_0339 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPA3_0339 IPR035654 Elongation factor 4, domain IV UPA3_0339 IPR013842 GTP-binding protein LepA, C-terminal UPA3_0339 IPR009000 Translation protein, beta-barrel domain superfamily UPA3_0339 IPR005225 Small GTP-binding protein domain UPA3_0339 IPR031157 Tr-type G domain, conserved site UPA3_0339 IPR004161 Translation elongation factor EFTu-like, domain 2 UPA3_0339 IPR038363 LepA, C-terminal domain superfamily UPA3_0339 IPR035647 EF-G domain III/V-like UPA3_0339 IPR006297 Elongation factor 4 UPA3_0339 IPR000640 Elongation factor EFG, domain V-like UPA3_0339 IPR000795 Transcription factor, GTP-binding domain UPA3_0342 IPR029028 Alpha/beta knot methyltransferases UPA3_0342 IPR029064 50S ribosomal protein L30e-like UPA3_0342 IPR001537 tRNA/rRNA methyltransferase, SpoU type UPA3_0342 IPR013123 RNA 2-O ribose methyltransferase, substrate binding UPA3_0342 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal UPA3_0349 IPR002677 Ribosomal protein L32p UPA3_0349 IPR011332 Zinc-binding ribosomal protein UPA3_0353 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain UPA3_0353 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site UPA3_0353 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain UPA3_0353 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase UPA3_0353 IPR036291 NAD(P)-binding domain superfamily UPA3_0358 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPA3_0358 IPR011994 Cytidylate kinase domain UPA3_0358 IPR003136 Cytidylate kinase UPA3_0361 IPR003768 Segregation and condensation protein A UPA3_0366 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UPA3_0366 IPR006901 tRNA methyltransferase TrmK UPA3_0371 IPR004506 tRNA-specific 2-thiouridylase UPA3_0371 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold UPA3_0371 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic UPA3_0371 IPR002606 Riboflavin kinase, bacterial UPA3_0371 IPR015864 FAD synthetase UPA3_0371 IPR023382 Adenine nucleotide alpha hydrolase-like domains UPA3_0371 IPR023465 Riboflavin kinase domain superfamily UPA3_0386 IPR005227 Putative pre-16S rRNA nuclease UPA3_0386 IPR037027 YqgF/RNase H-like domain superfamily UPA3_0386 IPR006641 YqgF/RNase H-like domain UPA3_0386 IPR012337 Ribonuclease H-like superfamily UPA3_0391 IPR009849 Domain of unknown function DUF1410 UPA3_0401 IPR035642 MraZ, N-terminal UPA3_0401 IPR020603 MraZ domain UPA3_0401 IPR035644 MraZ, C-terminal UPA3_0401 IPR003444 Transcriptional regulator MraZ UPA3_0401 IPR037914 SpoVT-AbrB domain superfamily UPA3_0401 IPR007159 SpoVT-AbrB domain UPA3_0401 IPR038619 MraZ superfamily UPA3_0423 IPR000740 GrpE nucleotide exchange factor UPA3_0423 IPR009012 GrpE nucleotide exchange factor, head UPA3_0424 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily UPA3_0424 IPR012724 Chaperone DnaJ UPA3_0424 IPR002939 Chaperone DnaJ, C-terminal UPA3_0424 IPR036869 Chaperone J-domain superfamily UPA3_0424 IPR018253 DnaJ domain, conserved site UPA3_0424 IPR008971 HSP40/DnaJ peptide-binding UPA3_0424 IPR001305 Heat shock protein DnaJ, cysteine-rich domain UPA3_0424 IPR001623 DnaJ domain UPA3_0436 IPR020536 Thil, AANH domain UPA3_0436 IPR004114 THUMP domain UPA3_0436 IPR003720 tRNA sulfurtransferase ThiI UPA3_0436 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold UPA3_0450 IPR012406 Urease accessory protein UreE UPA3_0450 IPR036118 UreE urease accessory, N-terminal domain superfamily UPA3_0450 IPR004029 UreE urease accessory, N-terminal UPA3_0450 IPR036675 UreE, C-terminal domain superfamily UPA3_0450 IPR007864 Urease accessory protein UreE, C-terminal domain UPA3_0453 IPR036463 Urease, gamma subunit superfamily UPA3_0453 IPR012010 Urease, gamma subunit UPA3_0453 IPR002026 Urease, gamma/gamma-beta subunit UPA3_0456 IPR036986 RNA-binding S4 domain superfamily UPA3_0456 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UPA3_0456 IPR002877 Ribosomal RNA methyltransferase FtsJ domain UPA3_0456 IPR004538 Haemolysin A /rRNA methyltransferase TlyA UPA3_0456 IPR002942 RNA-binding S4 domain UPA3_0457 IPR036775 DNA polymerase, Y-family, little finger domain superfamily UPA3_0457 IPR017961 DNA polymerase, Y-family, little finger domain UPA3_0457 IPR022880 DNA polymerase IV UPA3_0457 IPR001126 UmuC domain UPA3_0458 IPR008823 RuvB C-terminal winged helix domain UPA3_0458 IPR036390 Winged helix DNA-binding domain superfamily UPA3_0458 IPR041445 RuvB, AAA lid domain UPA3_0458 IPR004605 DNA helicase, Holliday junction RuvB-type UPA3_0458 IPR003593 AAA+ ATPase domain UPA3_0458 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPA3_0458 IPR008824 RuvB-like P-loop domain UPA3_0458 IPR036388 Winged helix-like DNA-binding domain superfamily UPA3_0467 IPR003593 AAA+ ATPase domain UPA3_0467 IPR004605 DNA helicase, Holliday junction RuvB-type UPA3_0467 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPA3_0467 IPR008824 RuvB-like P-loop domain UPA3_0467 IPR041445 RuvB, AAA lid domain UPA3_0467 IPR036390 Winged helix DNA-binding domain superfamily UPA3_0467 IPR008823 RuvB C-terminal winged helix domain UPA3_0467 IPR036388 Winged helix-like DNA-binding domain superfamily UPA3_0475 IPR013785 Aldolase-type TIM barrel UPA3_0475 IPR026019 Ribulose-phosphate 3-epimerase UPA3_0475 IPR000056 Ribulose-phosphate 3-epimerase-like UPA3_0475 IPR011060 Ribulose-phosphate binding barrel UPA3_0479 IPR022310 NAD/GMP synthase UPA3_0479 IPR003694 NAD(+) synthetase UPA3_0479 IPR022926 NH(3)-dependent NAD(+) synthetase UPA3_0479 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold UPA3_0482 IPR036477 Formyl transferase, N-terminal domain superfamily UPA3_0482 IPR005794 Methionyl-tRNA formyltransferase UPA3_0482 IPR011034 Formyl transferase-like, C-terminal domain superfamily UPA3_0482 IPR041711 Methionyl-tRNA formyltransferase, N-terminal domain UPA3_0482 IPR002376 Formyl transferase, N-terminal UPA3_0482 IPR005793 Formyl transferase, C-terminal UPA3_0487 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPA3_0487 IPR006073 GTP binding domain UPA3_0487 IPR019988 GTP-binding protein, riobosome biogenesis, YqeH UPA3_0487 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain UPA3_0506 IPR029057 Phosphoribosyltransferase-like UPA3_0506 IPR000836 Phosphoribosyltransferase domain UPA3_0506 IPR005764 Adenine phosphoribosyl transferase UPA3_0508 IPR020549 Endoribonuclease YbeY, conserved site UPA3_0508 IPR023091 Metalloprotease catalytic domain superfamily, predicted UPA3_0508 IPR002036 Endoribonuclease YbeY UPA3_0535 IPR006162 Phosphopantetheine attachment site UPA3_0535 IPR009081 Phosphopantetheine binding ACP domain UPA3_0535 IPR036736 ACP-like superfamily UPA3_0562 IPR012340 Nucleic acid-binding, OB-fold UPA3_0562 IPR006032 Ribosomal protein S12/S23 UPA3_0562 IPR005679 Ribosomal protein S12, bacterial-type UPA3_0571 IPR011332 Zinc-binding ribosomal protein UPA3_0571 IPR018264 Ribosomal protein L33, conserved site UPA3_0571 IPR001705 Ribosomal protein L33 UPA3_0571 IPR038584 Ribosomal protein L33 superfamily UPA3_0578 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich UPA3_0578 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein UPA3_0578 IPR023673 Ribosomal protein L1, conserved site UPA3_0578 IPR023674 Ribosomal protein L1-like UPA3_0578 IPR002143 Ribosomal protein L1 UPA3_0578 IPR005878 Ribosomal protein L1, bacterial-type UPA3_0579 IPR006519 Ribosomal protein L11, bacterial-type UPA3_0579 IPR000911 Ribosomal protein L11/L12 UPA3_0579 IPR020784 Ribosomal protein L11, N-terminal UPA3_0579 IPR020783 Ribosomal protein L11, C-terminal UPA3_0579 IPR036769 Ribosomal protein L11, C-terminal domain superfamily UPA3_0579 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily UPA3_0579 IPR020785 Ribosomal protein L11, conserved site UPA3_0588 IPR036791 Ribosomal protein L9, C-terminal domain superfamily UPA3_0588 IPR009027 Ribosomal protein L9/RNase H1, N-terminal UPA3_0588 IPR020070 Ribosomal protein L9, N-terminal UPA3_0588 IPR000244 Ribosomal protein L9 UPA3_0588 IPR036935 Ribosomal protein L9, N-terminal domain superfamily UPA3_0588 IPR020069 Ribosomal protein L9, C-terminal UPA3_0588 IPR020594 Ribosomal protein L9, bacteria/chloroplast UPA3_0589 IPR036870 Ribosomal protein S18 superfamily UPA3_0589 IPR001648 Ribosomal protein S18 UPA3_0591 IPR000529 Ribosomal protein S6 UPA3_0591 IPR035980 Ribosomal protein S6 superfamily UPA3_0591 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 UPA3_0591 IPR020814 Ribosomal protein S6, plastid/chloroplast UPA3_0605 IPR018257 Ribosomal protein L19, conserved site UPA3_0605 IPR038657 Ribosomal protein L19 superfamily UPA3_0605 IPR001857 Ribosomal protein L19 UPA3_0605 IPR008991 Translation protein SH3-like domain superfamily UPA3_0606 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain UPA3_0606 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal UPA3_0606 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal UPA3_0606 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria UPA3_0606 IPR029028 Alpha/beta knot methyltransferases UPA3_0615 IPR000754 Ribosomal protein S9 UPA3_0615 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup UPA3_0615 IPR020568 Ribosomal protein S5 domain 2-type fold UPA3_0615 IPR020574 Ribosomal protein S9, conserved site UPA3_0615 IPR023035 Ribosomal protein S9, bacterial/plastid UPA3_0643 IPR000100 Ribonuclease P UPA3_0643 IPR020539 Ribonuclease P, conserved site UPA3_0643 IPR020568 Ribosomal protein S5 domain 2-type fold UPA3_0643 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup UPA3_0644 IPR020939 Ribosomal protein L34, conserved site UPA3_0644 IPR000271 Ribosomal protein L34