locus-tag class description LVJ78_00015 PF06044 Dam-replacing family LVJ78_00015 PF17726 Dam-replacing HTH domain LVJ78_00020 PF01624 MutS domain I LVJ78_00020 PF05188 MutS domain II LVJ78_00020 PF05192 MutS domain III LVJ78_00020 PF05190 MutS family domain IV LVJ78_00020 PF00488 MutS domain V LVJ78_00030 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LVJ78_00035 PF01722 BolA-like protein LVJ78_00040 PF00005 ABC transporter LVJ78_00045 PF18075 FtsX extracellular domain LVJ78_00050 PF02609 Exonuclease VII small subunit LVJ78_00055 PF00348 Polyprenyl synthetase LVJ78_00060 PF01134 Glucose inhibited division protein A LVJ78_00060 PF13932 GidA associated domain LVJ78_00065 PF01541 GIY-YIG catalytic domain LVJ78_00070 PF02803 Thiolase, C-terminal domain LVJ78_00070 PF00108 Thiolase, N-terminal domain LVJ78_00075 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LVJ78_00075 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LVJ78_00075 PF00378 Enoyl-CoA hydratase/isomerase LVJ78_00080 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) LVJ78_00085 PF09317 Domain of unknown function (DUF1974) LVJ78_00085 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LVJ78_00085 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LVJ78_00100 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain LVJ78_00100 PF02843 Phosphoribosylglycinamide synthetase, C domain LVJ78_00100 PF02844 Phosphoribosylglycinamide synthetase, N domain LVJ78_00155 PF01548 Transposase LVJ78_00155 PF02371 Transposase IS116/IS110/IS902 family LVJ78_00160 PF00152 tRNA synthetases class II (D, K and N) LVJ78_00160 PF01336 OB-fold nucleic acid binding domain LVJ78_00165 PF02562 PhoH-like protein LVJ78_00165 PF13638 PIN domain LVJ78_00175 PF03239 Iron permease FTR1 family LVJ78_00180 PF09375 Imelysin LVJ78_00180 PF13473 Cupredoxin-like domain LVJ78_00185 PF04261 Dyp-type peroxidase family LVJ78_00190 PF01699 Sodium/calcium exchanger protein LVJ78_00200 PF03831 PhnA domain LVJ78_00200 PF08274 PhnA Zinc-Ribbon LVJ78_00205 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LVJ78_00215 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LVJ78_00215 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LVJ78_00220 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain LVJ78_00220 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LVJ78_00230 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase LVJ78_00235 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LVJ78_00235 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LVJ78_00240 PF01980 tRNA-methyltransferase O LVJ78_00240 PF18389 TrmO C-terminal domain LVJ78_00245 PF00857 Isochorismatase family LVJ78_00250 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LVJ78_00255 PF01012 Electron transfer flavoprotein domain LVJ78_00260 PF01012 Electron transfer flavoprotein domain LVJ78_00260 PF00766 Electron transfer flavoprotein FAD-binding domain LVJ78_00265 PF01212 Beta-eliminating lyase LVJ78_00270 PF09186 Domain of unknown function (DUF1949) LVJ78_00270 PF01205 Uncharacterized protein family UPF0029 LVJ78_00285 PF10609 NUBPL iron-transfer P-loop NTPase LVJ78_00290 PF00056 lactate/malate dehydrogenase, NAD binding domain LVJ78_00290 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LVJ78_00295 PF02560 Cyanate lyase C-terminal domain LVJ78_00300 PF03641 Possible lysine decarboxylase LVJ78_00305 PF00005 ABC transporter LVJ78_00315 PF00528 Binding-protein-dependent transport system inner membrane component LVJ78_00325 PF01367 5'-3' exonuclease, C-terminal SAM fold LVJ78_00325 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LVJ78_00325 PF00476 DNA polymerase family A LVJ78_00325 PF01612 3'-5' exonuclease LVJ78_00340 PF09382 RQC domain LVJ78_00340 PF16124 RecQ zinc-binding LVJ78_00340 PF00570 HRDC domain LVJ78_00340 PF00271 Helicase conserved C-terminal domain LVJ78_00340 PF00270 DEAD/DEAH box helicase LVJ78_00360 PF01638 HxlR-like helix-turn-helix LVJ78_00365 PF00300 Histidine phosphatase superfamily (branch 1) LVJ78_00370 PF00485 Phosphoribulokinase / Uridine kinase family LVJ78_00405 PF00849 RNA pseudouridylate synthase LVJ78_00410 PF01169 Uncharacterized protein family UPF0016 LVJ78_00415 PF00005 ABC transporter LVJ78_00415 PF00571 CBS domain LVJ78_00420 PF00528 Binding-protein-dependent transport system inner membrane component LVJ78_00440 PF02811 PHP domain LVJ78_00445 PF01300 Telomere recombination LVJ78_00450 PF02163 Peptidase family M50 LVJ78_00455 PF00793 DAHP synthetase I family LVJ78_00465 PF08379 Bacterial transglutaminase-like N-terminal region LVJ78_00465 PF01841 Transglutaminase-like superfamily LVJ78_00475 PF14403 Circularly permuted ATP-grasp type 2 LVJ78_00480 PF00578 AhpC/TSA family LVJ78_00505 PF05494 MlaC protein LVJ78_00510 PF02470 MlaD protein LVJ78_00515 PF02405 Permease MlaE LVJ78_00520 PF00005 ABC transporter LVJ78_00535 PF12833 Helix-turn-helix domain LVJ78_00535 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LVJ78_00535 PF02805 Metal binding domain of Ada LVJ78_00535 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LVJ78_00575 PF03852 DNA mismatch endonuclease Vsr LVJ78_00585 PF00145 C-5 cytosine-specific DNA methylase LVJ78_00590 PF01070 FMN-dependent dehydrogenase LVJ78_00605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LVJ78_00605 PF03466 LysR substrate binding domain LVJ78_00610 PF01368 DHH family LVJ78_00610 PF02272 DHHA1 domain LVJ78_00610 PF17768 RecJ OB domain LVJ78_00615 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family LVJ78_00620 PF08241 Methyltransferase domain LVJ78_00625 PF00561 alpha/beta hydrolase fold LVJ78_00630 PF00156 Phosphoribosyl transferase domain LVJ78_00635 PF00588 SpoU rRNA Methylase family LVJ78_00640 PF05036 Sporulation related domain LVJ78_00640 PF03330 Lytic transglycolase LVJ78_00645 PF07499 RuvA, C-terminal domain LVJ78_00645 PF01330 RuvA N terminal domain LVJ78_00650 PF00664 ABC transporter transmembrane region LVJ78_00650 PF00005 ABC transporter LVJ78_00670 PF01432 Peptidase family M3 LVJ78_00680 PF00375 Sodium:dicarboxylate symporter family LVJ78_00685 PF17243 POTRA domain TamA domain 1 LVJ78_00685 PF01103 Surface antigen LVJ78_00695 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) LVJ78_00700 PF01235 Sodium:alanine symporter family LVJ78_00705 PF02811 PHP domain LVJ78_00705 PF14579 Helix-hairpin-helix motif LVJ78_00705 PF01336 OB-fold nucleic acid binding domain LVJ78_00705 PF07733 Bacterial DNA polymerase III alpha NTPase domain LVJ78_00705 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LVJ78_00710 PF00593 TonB dependent receptor LVJ78_00710 PF07715 TonB-dependent Receptor Plug Domain LVJ78_00735 PF10282 Lactonase, 7-bladed beta-propeller LVJ78_00740 PF00561 alpha/beta hydrolase fold LVJ78_00745 PF13276 HTH-like domain LVJ78_00745 PF00665 Integrase core domain LVJ78_00745 PF13333 Integrase core domain LVJ78_00765 PF00483 Nucleotidyl transferase LVJ78_00770 PF09312 SurA N-terminal domain LVJ78_00770 PF00639 PPIC-type PPIASE domain LVJ78_00775 PF04453 LPS transport system D LVJ78_00780 PF01636 Phosphotransferase enzyme family LVJ78_00785 PF03023 Lipid II flippase MurJ LVJ78_00790 PF04055 Radical SAM superfamily LVJ78_00790 PF06463 Molybdenum Cofactor Synthesis C LVJ78_00805 PF02664 S-Ribosylhomocysteinase (LuxS) LVJ78_00815 PF02075 Crossover junction endodeoxyribonuclease RuvC LVJ78_00820 PF00342 Phosphoglucose isomerase LVJ78_00825 PF00929 Exonuclease LVJ78_00830 PF09334 tRNA synthetases class I (M) LVJ78_00830 PF08264 Anticodon-binding domain of tRNA LVJ78_00830 PF01588 Putative tRNA binding domain LVJ78_00840 PF01204 Trehalase LVJ78_00855 PF00675 Insulinase (Peptidase family M16) LVJ78_00855 PF05193 Peptidase M16 inactive domain LVJ78_00860 PF00448 SRP54-type protein, GTPase domain LVJ78_00860 PF02881 SRP54-type protein, helical bundle domain LVJ78_00865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LVJ78_00865 PF03466 LysR substrate binding domain LVJ78_00870 PF02028 BCCT, betaine/carnitine/choline family transporter LVJ78_00875 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB LVJ78_00875 PF08479 POTRA domain, ShlB-type LVJ78_00875 PF17287 POTRA domain LVJ78_00930 PF08267 Cobalamin-independent synthase, N-terminal domain LVJ78_00930 PF01717 Cobalamin-independent synthase, Catalytic domain LVJ78_00935 PF00206 Lyase LVJ78_00935 PF08328 Adenylosuccinate lyase C-terminal LVJ78_00945 PF04166 Pyridoxal phosphate biosynthetic protein PdxA LVJ78_00950 PF01011 PQQ enzyme repeat LVJ78_00960 PF03462 PCRF domain LVJ78_00960 PF00472 RF-1 domain LVJ78_00965 PF01734 Patatin-like phospholipase LVJ78_00990 PF01797 Transposase IS200 like LVJ78_00995 PF05088 Bacterial NAD-glutamate dehydrogenase LVJ78_01005 PF00561 alpha/beta hydrolase fold LVJ78_01005 PF00364 Biotin-requiring enzyme LVJ78_01010 PF02779 Transketolase, pyrimidine binding domain LVJ78_01010 PF02780 Transketolase, C-terminal domain LVJ78_01015 PF00676 Dehydrogenase E1 component LVJ78_01020 PF01513 ATP-NAD kinase LVJ78_01025 PF01590 GAF domain LVJ78_01025 PF00158 Sigma-54 interaction domain LVJ78_01025 PF02954 Bacterial regulatory protein, Fis family LVJ78_01035 PF17762 HTH domain found in ParB protein LVJ78_01035 PF02195 ParB-like nuclease domain LVJ78_01045 PF00119 ATP synthase A chain LVJ78_01050 PF00137 ATP synthase subunit C LVJ78_01055 PF00430 ATP synthase B/B' CF(0) LVJ78_01060 PF00213 ATP synthase delta (OSCP) subunit LVJ78_01065 PF00306 ATP synthase alpha/beta chain, C terminal domain LVJ78_01065 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LVJ78_01065 PF02874 ATP synthase alpha/beta family, beta-barrel domain LVJ78_01070 PF00231 ATP synthase LVJ78_01075 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LVJ78_01075 PF02874 ATP synthase alpha/beta family, beta-barrel domain LVJ78_01080 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain LVJ78_01090 PF13726 Na+-H+ antiporter family LVJ78_01090 PF03553 Na+/H+ antiporter family LVJ78_01095 PF04102 SlyX LVJ78_01105 PF13276 HTH-like domain LVJ78_01105 PF00665 Integrase core domain LVJ78_01105 PF13333 Integrase core domain LVJ78_01115 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain LVJ78_01115 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LVJ78_01125 PF01491 Frataxin-like domain LVJ78_01135 PF01774 UreD urease accessory protein LVJ78_01140 PF02492 CobW/HypB/UreG, nucleotide-binding domain LVJ78_01145 PF04343 Protein of unknown function, DUF488 LVJ78_01155 PF01730 UreF LVJ78_01160 PF05194 UreE urease accessory protein, C-terminal domain LVJ78_01160 PF02814 UreE urease accessory protein, N-terminal domain LVJ78_01165 PF04480 Protein of unknown function (DUF559) LVJ78_01170 PF00449 Urease alpha-subunit, N-terminal domain LVJ78_01170 PF01979 Amidohydrolase family LVJ78_01175 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LVJ78_01180 PF00547 Urease, gamma subunit LVJ78_01185 PF00005 ABC transporter LVJ78_01190 PF00005 ABC transporter LVJ78_01200 PF02653 Branched-chain amino acid transport system / permease component LVJ78_01210 PF00149 Calcineurin-like phosphoesterase LVJ78_01215 PF05726 Pirin C-terminal cupin domain LVJ78_01215 PF02678 Pirin LVJ78_01220 PF00999 Sodium/hydrogen exchanger family LVJ78_01220 PF02254 TrkA-N domain LVJ78_01230 PF14542 GCN5-related N-acetyl-transferase LVJ78_01240 PF03358 NADPH-dependent FMN reductase LVJ78_01245 PF05199 GMC oxidoreductase LVJ78_01250 PF00171 Aldehyde dehydrogenase family LVJ78_01260 PF10458 Valyl tRNA synthetase tRNA binding arm LVJ78_01260 PF00133 tRNA synthetases class I (I, L, M and V) LVJ78_01260 PF08264 Anticodon-binding domain of tRNA LVJ78_01270 PF00557 Metallopeptidase family M24 LVJ78_01275 PF00218 Indole-3-glycerol phosphate synthase LVJ78_01280 PF00593 TonB dependent receptor LVJ78_01280 PF07715 TonB-dependent Receptor Plug Domain LVJ78_01285 PF18331 PKHD-type hydroxylase C-terminal domain LVJ78_01285 PF13640 2OG-Fe(II) oxygenase superfamily LVJ78_01290 PF03458 UPF0126 domain LVJ78_01300 PF01569 PAP2 superfamily LVJ78_01305 PF00583 Acetyltransferase (GNAT) family LVJ78_01315 PF17484 N-Lobe handle Tf-binding protein B LVJ78_01315 PF01298 C-lobe and N-lobe beta barrels of Tf-binding protein B LVJ78_01315 PF17483 C-lobe handle domain of Tf-binding protein B LVJ78_01320 PF01960 ArgJ family LVJ78_01325 PF00654 Voltage gated chloride channel LVJ78_01330 PF02580 D-Tyr-tRNA(Tyr) deacylase LVJ78_01335 PF02600 Disulfide bond formation protein DsbB LVJ78_01345 PF01523 Putative modulator of DNA gyrase LVJ78_01350 PF00107 Zinc-binding dehydrogenase LVJ78_01350 PF08240 Alcohol dehydrogenase GroES-like domain LVJ78_01355 PF04751 Protein of unknown function (DUF615) LVJ78_01365 PF00909 Ammonium Transporter Family LVJ78_01370 PF00543 Nitrogen regulatory protein P-II LVJ78_01385 PF01551 Peptidase family M23 LVJ78_01385 PF01476 LysM domain LVJ78_01410 PF00318 Ribosomal protein S2 LVJ78_01415 PF00889 Elongation factor TS LVJ78_01420 PF00696 Amino acid kinase family LVJ78_01425 PF01765 Ribosome recycling factor LVJ78_01430 PF01255 Putative undecaprenyl diphosphate synthase LVJ78_01440 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase LVJ78_01440 PF13288 DXP reductoisomerase C-terminal domain LVJ78_01440 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain LVJ78_01445 PF02163 Peptidase family M50 LVJ78_01445 PF17820 PDZ domain LVJ78_01450 PF07244 Surface antigen variable number repeat LVJ78_01450 PF01103 Surface antigen LVJ78_01460 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD LVJ78_01460 PF00132 Bacterial transferase hexapeptide (six repeats) LVJ78_01465 PF07977 FabA-like domain LVJ78_01470 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 LVJ78_01470 PF00132 Bacterial transferase hexapeptide (six repeats) LVJ78_01475 PF01965 DJ-1/PfpI family LVJ78_01485 PF00171 Aldehyde dehydrogenase family LVJ78_01490 PF02684 Lipid-A-disaccharide synthetase LVJ78_01495 PF01351 Ribonuclease HII LVJ78_01500 PF01180 Dihydroorotate dehydrogenase LVJ78_01505 PF01343 Peptidase family S49 LVJ78_01505 PF06965 Na+/H+ antiporter 1 LVJ78_01510 PF13419 Haloacid dehalogenase-like hydrolase LVJ78_01515 PF11008 Protein of unknown function (DUF2846) LVJ78_01525 PF01479 S4 domain LVJ78_01525 PF00849 RNA pseudouridylate synthase LVJ78_01530 PF12111 Polyribonucleotide phosphorylase C terminal LVJ78_01530 PF00575 S1 RNA binding domain LVJ78_01530 PF10150 Ribonuclease E/G family LVJ78_01535 PF00521 DNA gyrase/topoisomerase IV, subunit A LVJ78_01540 PF00512 His Kinase A (phospho-acceptor) domain LVJ78_01540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LVJ78_01545 PF00158 Sigma-54 interaction domain LVJ78_01545 PF02954 Bacterial regulatory protein, Fis family LVJ78_01545 PF00072 Response regulator receiver domain LVJ78_01550 PF01523 Putative modulator of DNA gyrase LVJ78_01560 PF00005 ABC transporter LVJ78_01560 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LVJ78_01565 PF00005 ABC transporter LVJ78_01565 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LVJ78_01570 PF00528 Binding-protein-dependent transport system inner membrane component LVJ78_01570 PF12911 N-terminal TM domain of oligopeptide transport permease C LVJ78_01575 PF00528 Binding-protein-dependent transport system inner membrane component LVJ78_01580 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LVJ78_01585 PF08335 GlnD PII-uridylyltransferase LVJ78_01585 PF03710 Glutamate-ammonia ligase adenylyltransferase LVJ78_01590 PF02525 Flavodoxin-like fold LVJ78_01595 PF00267 Gram-negative porin LVJ78_01600 PF00795 Carbon-nitrogen hydrolase LVJ78_01610 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain LVJ78_01610 PF00117 Glutamine amidotransferase class-I LVJ78_01615 PF01810 LysE type translocator LVJ78_01620 PF02567 Phenazine biosynthesis-like protein LVJ78_01625 PF00561 alpha/beta hydrolase fold LVJ78_01635 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LVJ78_01635 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LVJ78_01635 PF02142 MGS-like domain LVJ78_01650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LVJ78_01650 PF03466 LysR substrate binding domain LVJ78_01655 PF07690 Major Facilitator Superfamily LVJ78_01660 PF07726 ATPase family associated with various cellular activities (AAA) LVJ78_01660 PF17863 AAA lid domain LVJ78_01670 PF13559 Domain of unknown function (DUF4129) LVJ78_01670 PF01841 Transglutaminase-like superfamily LVJ78_01670 PF11992 Domain of unknown function (DUF3488) LVJ78_01675 PF00899 ThiF family LVJ78_01680 PF01967 MoaC family LVJ78_01690 PF14883 Hypothetical glycosyl hydrolase family 13 LVJ78_01690 PF01522 Polysaccharide deacetylase LVJ78_01695 PF00535 Glycosyl transferase family 2 LVJ78_01710 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain LVJ78_01710 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain LVJ78_01730 PF01467 Cytidylyltransferase-like LVJ78_01735 PF03099 Biotin/lipoate A/B protein ligase family LVJ78_01735 PF03309 Type III pantothenate kinase LVJ78_01735 PF02237 Biotin protein ligase C terminal domain LVJ78_01755 PF00378 Enoyl-CoA hydratase/isomerase LVJ78_01765 PF17810 Arginine decarboxylase helical bundle domain LVJ78_01765 PF17944 Arginine decarboxylase C-terminal helical extension LVJ78_01765 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LVJ78_01770 PF04445 Putative SAM-dependent methyltransferase LVJ78_01780 PF01047 MarR family LVJ78_01785 PF01613 Flavin reductase like domain LVJ78_01790 PF00484 Carbonic anhydrase LVJ78_01795 PF01467 Cytidylyltransferase-like LVJ78_01805 PF02590 Predicted SPOUT methyltransferase LVJ78_01815 PF13292 1-deoxy-D-xylulose-5-phosphate synthase LVJ78_01815 PF02779 Transketolase, pyrimidine binding domain LVJ78_01815 PF02780 Transketolase, C-terminal domain LVJ78_01820 PF03315 Serine dehydratase beta chain LVJ78_01820 PF03313 Serine dehydratase alpha chain LVJ78_01825 PF02706 Chain length determinant protein LVJ78_01825 PF13807 G-rich domain on putative tyrosine kinase LVJ78_01825 PF13614 AAA domain LVJ78_01830 PF01451 Low molecular weight phosphotyrosine protein phosphatase LVJ78_01835 PF18412 Outer-membrane lipoprotein Wza C-terminal domain LVJ78_01835 PF10531 SLBB domain LVJ78_01835 PF02563 Polysaccharide biosynthesis/export protein LVJ78_01840 PF02719 Polysaccharide biosynthesis protein LVJ78_01845 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LVJ78_01855 PF02397 Bacterial sugar transferase LVJ78_01865 PF00534 Glycosyl transferases group 1 LVJ78_01865 PF13477 Glycosyl transferase 4-like LVJ78_01875 PF00534 Glycosyl transferases group 1 LVJ78_01875 PF13439 Glycosyltransferase Family 4 LVJ78_01885 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LVJ78_01885 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LVJ78_01885 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LVJ78_01890 PF01872 RibD C-terminal domain LVJ78_01890 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LVJ78_01900 PF03477 ATP cone domain LVJ78_01905 PF13230 Glutamine amidotransferases class-II LVJ78_01910 PF02646 RmuC family LVJ78_01920 PF02592 Putative vitamin uptake transporter LVJ78_01925 PF14489 QueF-like protein LVJ78_01930 PF05979 Bacterial protein of unknown function (DUF896) LVJ78_01935 PF05726 Pirin C-terminal cupin domain LVJ78_01935 PF02678 Pirin LVJ78_01940 PF00753 Metallo-beta-lactamase superfamily LVJ78_01950 PF01926 50S ribosome-binding GTPase LVJ78_01955 PF00034 Cytochrome c LVJ78_01960 PF05140 ResB-like family LVJ78_01965 PF01578 Cytochrome C assembly protein LVJ78_01970 PF03471 Transporter associated domain LVJ78_01970 PF00571 CBS domain LVJ78_01970 PF03741 Integral membrane protein TerC family LVJ78_01985 PF00459 Inositol monophosphatase family LVJ78_01990 PF04452 RNA methyltransferase LVJ78_01995 PF00665 Integrase core domain LVJ78_01995 PF13333 Integrase core domain LVJ78_01995 PF13276 HTH-like domain LVJ78_02005 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) LVJ78_02010 PF01025 GrpE LVJ78_02015 PF00012 Hsp70 protein LVJ78_02020 PF00106 short chain dehydrogenase LVJ78_02025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LVJ78_02025 PF03466 LysR substrate binding domain LVJ78_02030 PF00924 Mechanosensitive ion channel LVJ78_02035 PF11940 Domain of unknown function (DUF3458) Ig-like fold LVJ78_02035 PF17432 Domain of unknown function (DUF3458_C) ARM repeats LVJ78_02035 PF01433 Peptidase family M1 domain LVJ78_02045 PF06628 Catalase-related immune-responsive LVJ78_02045 PF00199 Catalase LVJ78_02050 PF00881 Nitroreductase family LVJ78_02055 PF03358 NADPH-dependent FMN reductase LVJ78_02060 PF03631 Virulence factor BrkB LVJ78_02065 PF13488 Glycine zipper LVJ78_02065 PF00691 OmpA family LVJ78_02070 PF03372 Endonuclease/Exonuclease/phosphatase family LVJ78_02075 PF01022 Bacterial regulatory protein, arsR family LVJ78_02085 PF13276 HTH-like domain LVJ78_02085 PF00665 Integrase core domain LVJ78_02085 PF13333 Integrase core domain LVJ78_02105 PF04575 Protein of unknown function (DUF560) LVJ78_02110 PF01810 LysE type translocator LVJ78_02115 PF03279 Bacterial lipid A biosynthesis acyltransferase LVJ78_02125 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LVJ78_02125 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LVJ78_02140 PF01384 Phosphate transporter family LVJ78_02145 PF02581 Thiamine monophosphate synthase LVJ78_02150 PF14849 YidC periplasmic domain LVJ78_02150 PF02096 60Kd inner membrane protein LVJ78_02155 PF01809 Putative membrane protein insertion efficiency factor LVJ78_02160 PF00825 Ribonuclease P LVJ78_02165 PF00468 Ribosomal protein L34 LVJ78_02170 PF00308 Bacterial dnaA protein LVJ78_02170 PF08299 Bacterial dnaA protein helix-turn-helix LVJ78_02170 PF11638 DnaA N-terminal domain LVJ78_02175 PF00712 DNA polymerase III beta subunit, N-terminal domain LVJ78_02175 PF02767 DNA polymerase III beta subunit, central domain LVJ78_02175 PF02768 DNA polymerase III beta subunit, C-terminal domain LVJ78_02180 PF00986 DNA gyrase B subunit, carboxyl terminus LVJ78_02180 PF18053 DNA gyrase B subunit insert domain LVJ78_02180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LVJ78_02180 PF01751 Toprim domain LVJ78_02180 PF00204 DNA gyrase B LVJ78_02185 PF02899 Phage integrase, N-terminal SAM-like domain LVJ78_02185 PF00589 Phage integrase family LVJ78_02200 PF00582 Universal stress protein family LVJ78_02205 PF08361 MAATS-type transcriptional repressor, C-terminal region LVJ78_02205 PF00440 Bacterial regulatory proteins, tetR family LVJ78_02210 PF00529 HlyD membrane-fusion protein of T1SS LVJ78_02210 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LVJ78_02215 PF00873 AcrB/AcrD/AcrF family LVJ78_02220 PF02321 Outer membrane efflux protein LVJ78_02225 PF00830 Ribosomal L28 family LVJ78_02230 PF00471 Ribosomal protein L33 LVJ78_02235 PF01494 FAD binding domain LVJ78_02245 PF00348 Polyprenyl synthetase LVJ78_02255 PF00829 Ribosomal prokaryotic L21 protein LVJ78_02260 PF01016 Ribosomal L27 protein LVJ78_02265 PF07690 Major Facilitator Superfamily LVJ78_02270 PF01430 Hsp33 protein LVJ78_02280 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LVJ78_02280 PF00005 ABC transporter LVJ78_02285 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LVJ78_02285 PF00005 ABC transporter LVJ78_02290 PF00528 Binding-protein-dependent transport system inner membrane component LVJ78_02290 PF12911 N-terminal TM domain of oligopeptide transport permease C LVJ78_02295 PF00528 Binding-protein-dependent transport system inner membrane component LVJ78_02300 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LVJ78_02305 PF01741 Large-conductance mechanosensitive channel, MscL LVJ78_02315 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LVJ78_02325 PF02696 Uncharacterized ACR, YdiU/UPF0061 family LVJ78_02330 PF01207 Dihydrouridine synthase (Dus) LVJ78_02335 PF01757 Acyltransferase family LVJ78_02340 PF02954 Bacterial regulatory protein, Fis family LVJ78_02345 PF02142 MGS-like domain LVJ78_02345 PF01808 AICARFT/IMPCHase bienzyme LVJ78_02360 PF02321 Outer membrane efflux protein LVJ78_02370 PF13533 Biotin-lipoyl like LVJ78_02375 PF07690 Major Facilitator Superfamily LVJ78_02380 PF01636 Phosphotransferase enzyme family LVJ78_02415 PF00581 Rhodanese-like domain LVJ78_02415 PF00899 ThiF family LVJ78_02425 PF00121 Triosephosphate isomerase LVJ78_02440 PF04371 Porphyromonas-type peptidyl-arginine deiminase LVJ78_02455 PF00013 KH domain LVJ78_02455 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain LVJ78_02455 PF01138 3' exoribonuclease family, domain 1 LVJ78_02455 PF03725 3' exoribonuclease family, domain 2 LVJ78_02455 PF00575 S1 RNA binding domain LVJ78_02470 PF12706 Beta-lactamase superfamily domain LVJ78_02475 PF00465 Iron-containing alcohol dehydrogenase LVJ78_02475 PF00171 Aldehyde dehydrogenase family LVJ78_02480 PF00255 Glutathione peroxidase LVJ78_02490 PF00312 Ribosomal protein S15 LVJ78_02495 PF01509 TruB family pseudouridylate synthase (N terminal domain) LVJ78_02495 PF16198 tRNA pseudouridylate synthase B C-terminal domain LVJ78_02495 PF09157 Pseudouridine synthase II TruB, C-terminal LVJ78_02510 PF02033 Ribosome-binding factor A LVJ78_02515 PF00294 pfkB family carbohydrate kinase LVJ78_02520 PF00083 Sugar (and other) transporter LVJ78_02530 PF04760 Translation initiation factor IF-2, N-terminal region LVJ78_02530 PF00009 Elongation factor Tu GTP binding domain LVJ78_02530 PF11987 Translation-initiation factor 2 LVJ78_02535 PF13184 NusA-like KH domain LVJ78_02535 PF08529 NusA N-terminal domain LVJ78_02540 PF17384 RimP C-terminal SH3 domain LVJ78_02540 PF02576 RimP N-terminal domain LVJ78_02550 PF00266 Aminotransferase class-V LVJ78_02555 PF00140 Sigma-70 factor, region 1.2 LVJ78_02555 PF04545 Sigma-70, region 4 LVJ78_02555 PF04542 Sigma-70 region 2 LVJ78_02560 PF00795 Carbon-nitrogen hydrolase LVJ78_02565 PF05661 Protein of unknown function (DUF808) LVJ78_02570 PF03471 Transporter associated domain LVJ78_02570 PF00999 Sodium/hydrogen exchanger family LVJ78_02570 PF02080 TrkA-C domain LVJ78_02575 PF01053 Cys/Met metabolism PLP-dependent enzyme LVJ78_02580 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LVJ78_02580 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LVJ78_02585 PF02649 Type I GTP cyclohydrolase folE2 LVJ78_02590 PF01053 Cys/Met metabolism PLP-dependent enzyme LVJ78_02595 PF08218 Citrate lyase ligase C-terminal domain LVJ78_02600 PF06857 Malonate decarboxylase delta subunit (MdcD) LVJ78_02605 PF03328 HpcH/HpaI aldolase/citrate lyase family LVJ78_02610 PF04223 Citrate lyase, alpha subunit (CitF) LVJ78_02615 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase LVJ78_02615 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase LVJ78_02620 PF00939 Sodium:sulfate symporter transmembrane region LVJ78_02625 PF07992 Pyridine nucleotide-disulphide oxidoreductase LVJ78_02630 PF11067 Protein of unknown function (DUF2868) LVJ78_02640 PF01926 50S ribosome-binding GTPase LVJ78_02640 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal LVJ78_02650 PF01118 Semialdehyde dehydrogenase, NAD binding domain LVJ78_02650 PF02774 Semialdehyde dehydrogenase, dimerisation domain LVJ78_02655 PF02705 K+ potassium transporter LVJ78_02670 PF02082 Transcriptional regulator LVJ78_02675 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain LVJ78_02675 PF03900 Porphobilinogen deaminase, C-terminal domain LVJ78_02680 PF02602 Uroporphyrinogen-III synthase HemD LVJ78_02685 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase LVJ78_02695 PF10411 Disulfide bond isomerase protein N-terminus LVJ78_02695 PF13098 Thioredoxin-like domain LVJ78_02705 PF02153 Prephenate dehydrogenase LVJ78_02705 PF01842 ACT domain LVJ78_02715 PF17946 RecC C-terminal domain LVJ78_02720 PF01641 SelR domain LVJ78_02725 PF01510 N-acetylmuramoyl-L-alanine amidase LVJ78_02735 PF12826 Helix-hairpin-helix motif LVJ78_02735 PF03119 NAD-dependent DNA ligase C4 zinc finger domain LVJ78_02735 PF03120 NAD-dependent DNA ligase OB-fold domain LVJ78_02735 PF01653 NAD-dependent DNA ligase adenylation domain LVJ78_02735 PF00533 BRCA1 C Terminus (BRCT) domain LVJ78_02740 PF00483 Nucleotidyl transferase LVJ78_02745 PF04715 Anthranilate synthase component I, N terminal region LVJ78_02745 PF00425 chorismate binding enzyme LVJ78_02745 PF00117 Glutamine amidotransferase class-I LVJ78_02750 PF03976 Polyphosphate kinase 2 (PPK2) LVJ78_02755 PF00267 Gram-negative porin LVJ78_02765 PF17827 PrmC N-terminal domain LVJ78_02765 PF05175 Methyltransferase small domain LVJ78_02770 PF08502 LeuA allosteric (dimerisation) domain LVJ78_02770 PF00682 HMGL-like LVJ78_02775 PF01081 KDPG and KHG aldolase LVJ78_02780 PF00920 Dehydratase family LVJ78_02785 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain LVJ78_02785 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain LVJ78_02790 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase LVJ78_02795 PF02685 Glucokinase LVJ78_02800 PF02685 Glucokinase LVJ78_02800 PF01380 SIS domain LVJ78_02800 PF01418 Helix-turn-helix domain, rpiR family LVJ78_02805 PF00342 Phosphoglucose isomerase LVJ78_02810 PF07690 Major Facilitator Superfamily LVJ78_02815 PF03553 Na+/H+ antiporter family LVJ78_02820 PF00248 Aldo/keto reductase family LVJ78_02825 PF00762 Ferrochelatase LVJ78_02830 PF01580 FtsK/SpoIIIE family LVJ78_02830 PF09397 Ftsk gamma domain LVJ78_02830 PF17854 FtsK alpha domain LVJ78_02830 PF13491 4TM region of DNA translocase FtsK/SpoIIIE LVJ78_02835 PF03702 Anhydro-N-acetylmuramic acid kinase LVJ78_02840 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LVJ78_02850 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LVJ78_02850 PF00205 Thiamine pyrophosphate enzyme, central domain LVJ78_02850 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LVJ78_02855 PF10369 Small subunit of acetolactate synthase LVJ78_02865 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain LVJ78_02865 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain LVJ78_02870 PF00171 Aldehyde dehydrogenase family LVJ78_02890 PF04575 Protein of unknown function (DUF560) LVJ78_02895 PF01066 CDP-alcohol phosphatidyltransferase LVJ78_02900 PF01925 Sulfite exporter TauE/SafE LVJ78_02905 PF01906 Putative heavy-metal-binding LVJ78_02915 PF01476 LysM domain LVJ78_02915 PF04972 BON domain LVJ78_02930 PF00005 ABC transporter LVJ78_02935 PF01814 Hemerythrin HHE cation binding domain LVJ78_02940 PF03476 MOSC N-terminal beta barrel domain LVJ78_02940 PF03473 MOSC domain LVJ78_02940 PF00111 2Fe-2S iron-sulfur cluster binding domain LVJ78_02945 PF00127 Copper binding proteins, plastocyanin/azurin family LVJ78_02955 PF07516 SecA Wing and Scaffold domain LVJ78_02955 PF01043 SecA preprotein cross-linking domain LVJ78_02955 PF07517 SecA DEAD-like domain LVJ78_02955 PF02810 SEC-C motif LVJ78_02960 PF01245 Ribosomal protein L19 LVJ78_02965 PF01746 tRNA (Guanine-1)-methyltransferase LVJ78_02970 PF05239 PRC-barrel domain LVJ78_02970 PF01782 RimM N-terminal domain LVJ78_02975 PF00886 Ribosomal protein S16 LVJ78_02985 PF01761 3-dehydroquinate synthase LVJ78_02990 PF01202 Shikimate kinase LVJ78_02995 PF11741 AMIN domain LVJ78_02995 PF00263 Bacterial type II and III secretion system protein LVJ78_02995 PF03958 Bacterial type II/III secretion system short domain LVJ78_02995 PF07660 Secretin and TonB N terminus short domain LVJ78_03005 PF04350 Pilus assembly protein, PilO LVJ78_03010 PF05137 Fimbrial assembly protein (PilN) LVJ78_03020 PF17092 Penicillin-binding protein OB-like domain LVJ78_03020 PF00912 Transglycosylase LVJ78_03020 PF00905 Penicillin binding protein transpeptidase domain LVJ78_03025 PF13358 DDE superfamily endonuclease LVJ78_03040 PF01521 Iron-sulphur cluster biosynthesis LVJ78_03055 PF01322 Cytochrome C' LVJ78_03060 PF01322 Cytochrome C' LVJ78_03065 PF00106 short chain dehydrogenase LVJ78_03090 PF13439 Glycosyltransferase Family 4 LVJ78_03090 PF00534 Glycosyl transferases group 1 LVJ78_03095 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase LVJ78_03100 PF00483 Nucleotidyl transferase LVJ78_03105 PF16363 GDP-mannose 4,6 dehydratase LVJ78_03115 PF00535 Glycosyl transferase family 2 LVJ78_03140 PF01180 Dihydroorotate dehydrogenase LVJ78_03145 PF00999 Sodium/hydrogen exchanger family LVJ78_03145 PF02254 TrkA-N domain LVJ78_03145 PF02080 TrkA-C domain LVJ78_03160 PF13333 Integrase core domain LVJ78_03160 PF00665 Integrase core domain LVJ78_03160 PF13276 HTH-like domain LVJ78_03175 PF02091 Glycyl-tRNA synthetase alpha subunit LVJ78_03185 PF02092 Glycyl-tRNA synthetase beta subunit LVJ78_03185 PF05746 DALR anticodon binding domain LVJ78_03195 PF06426 Serine acetyltransferase, N-terminal LVJ78_03195 PF00132 Bacterial transferase hexapeptide (six repeats) LVJ78_03200 PF02110 Hydroxyethylthiazole kinase family LVJ78_03205 PF10150 Ribonuclease E/G family LVJ78_03205 PF00575 S1 RNA binding domain LVJ78_03210 PF02545 Maf-like protein LVJ78_03215 PF00106 short chain dehydrogenase LVJ78_03220 PF08402 TOBE domain LVJ78_03220 PF00005 ABC transporter LVJ78_03245 PF09335 SNARE associated Golgi protein LVJ78_03250 PF00398 Ribosomal RNA adenine dimethylase LVJ78_03275 PF00929 Exonuclease LVJ78_03275 PF02811 PHP domain LVJ78_03275 PF14579 Helix-hairpin-helix motif LVJ78_03275 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LVJ78_03275 PF11490 DNA polymerase III polC-type N-terminus II LVJ78_03275 PF07733 Bacterial DNA polymerase III alpha NTPase domain LVJ78_03285 PF01435 Peptidase family M48 LVJ78_03290 PF00171 Aldehyde dehydrogenase family LVJ78_03295 PF04055 Radical SAM superfamily LVJ78_03295 PF06969 HemN C-terminal domain LVJ78_03300 PF00027 Cyclic nucleotide-binding domain LVJ78_03300 PF13545 Crp-like helix-turn-helix domain LVJ78_03305 PF03466 LysR substrate binding domain LVJ78_03305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LVJ78_03310 PF00691 OmpA family LVJ78_03315 PF02769 AIR synthase related protein, C-terminal domain LVJ78_03315 PF00586 AIR synthase related protein, N-terminal domain LVJ78_03320 PF04608 Phosphatidylglycerophosphatase A LVJ78_03325 PF04379 ApaG domain LVJ78_03330 PF01235 Sodium:alanine symporter family LVJ78_03350 PF00005 ABC transporter LVJ78_03355 PF00950 ABC 3 transport family LVJ78_03360 PF01297 Zinc-uptake complex component A periplasmic LVJ78_03365 PF00005 ABC transporter LVJ78_03365 PF09383 NIL domain LVJ78_03370 PF00528 Binding-protein-dependent transport system inner membrane component LVJ78_03375 PF03180 NLPA lipoprotein LVJ78_03385 PF00115 Cytochrome C and Quinol oxidase polypeptide I LVJ78_03405 PF18146 Damage-inducible protein CinA KH domain LVJ78_03405 PF02464 Competence-damaged protein LVJ78_03405 PF00994 Probable molybdopterin binding domain LVJ78_03410 PF00764 Arginosuccinate synthase LVJ78_03415 PF02463 RecF/RecN/SMC N terminal domain LVJ78_03415 PF06470 SMC proteins Flexible Hinge Domain LVJ78_03420 PF01389 OmpA-like transmembrane domain LVJ78_03420 PF00691 OmpA family LVJ78_03430 PF00186 Dihydrofolate reductase LVJ78_03440 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LVJ78_03445 PF05872 Bacterial protein of unknown function (DUF853) LVJ78_03450 PF02673 Bacitracin resistance protein BacA LVJ78_03465 PF00248 Aldo/keto reductase family LVJ78_03480 PF04321 RmlD substrate binding domain LVJ78_03485 PF04011 LemA family LVJ78_03490 PF02694 Uncharacterised BCR, YnfA/UPF0060 family LVJ78_03505 PF01156 Inosine-uridine preferring nucleoside hydrolase LVJ78_03515 PF01207 Dihydrouridine synthase (Dus) LVJ78_03540 PF01867 CRISPR associated protein Cas1 LVJ78_03565 PF03787 RAMP superfamily LVJ78_03575 PF01966 HD domain LVJ78_03575 PF18211 Csm1 subunit domain B LVJ78_03600 PF00586 AIR synthase related protein, N-terminal domain LVJ78_03600 PF02769 AIR synthase related protein, C-terminal domain LVJ78_03605 PF00158 Sigma-54 interaction domain LVJ78_03605 PF02830 V4R domain LVJ78_03605 PF02954 Bacterial regulatory protein, Fis family LVJ78_03605 PF06505 Activator of aromatic catabolism LVJ78_03610 PF02954 Bacterial regulatory protein, Fis family LVJ78_03610 PF00158 Sigma-54 interaction domain LVJ78_03610 PF06505 Activator of aromatic catabolism LVJ78_03610 PF02830 V4R domain LVJ78_03615 PF06099 Phenol hydroxylase subunit LVJ78_03620 PF02332 Methane/Phenol/Toluene Hydroxylase LVJ78_03625 PF02406 MmoB/DmpM family LVJ78_03630 PF02332 Methane/Phenol/Toluene Hydroxylase LVJ78_03630 PF04945 YHS domain LVJ78_03635 PF04663 Phenol hydroxylase conserved region LVJ78_03640 PF00175 Oxidoreductase NAD-binding domain LVJ78_03640 PF00111 2Fe-2S iron-sulfur cluster binding domain LVJ78_03640 PF00970 Oxidoreductase FAD-binding domain LVJ78_03645 PF01118 Semialdehyde dehydrogenase, NAD binding domain LVJ78_03645 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation LVJ78_03650 PF00682 HMGL-like LVJ78_03650 PF07836 DmpG-like communication domain LVJ78_03660 PF01361 Tautomerase enzyme LVJ78_03665 PF00111 2Fe-2S iron-sulfur cluster binding domain LVJ78_03670 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LVJ78_03675 PF00171 Aldehyde dehydrogenase family LVJ78_03695 PF18073 Rubredoxin metal binding domain LVJ78_03705 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LVJ78_03710 PF00294 pfkB family carbohydrate kinase LVJ78_03715 PF01370 NAD dependent epimerase/dehydratase family LVJ78_03720 PF01965 DJ-1/PfpI family LVJ78_03725 PF03737 Aldolase/RraA LVJ78_03730 PF02566 OsmC-like protein LVJ78_03765 PF03006 Haemolysin-III related LVJ78_03775 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LVJ78_03780 PF02545 Maf-like protein LVJ78_03790 PF01783 Ribosomal L32p protein family LVJ78_03795 PF00156 Phosphoribosyl transferase domain LVJ78_03800 PF02504 Fatty acid synthesis protein LVJ78_03805 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LVJ78_03805 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LVJ78_03830 PF00698 Acyl transferase domain LVJ78_03840 PF00815 Histidinol dehydrogenase LVJ78_03850 PF01634 ATP phosphoribosyltransferase LVJ78_03855 PF02630 SCO1/SenC LVJ78_03865 PF00456 Transketolase, thiamine diphosphate binding domain LVJ78_03865 PF02780 Transketolase, C-terminal domain LVJ78_03865 PF02779 Transketolase, pyrimidine binding domain LVJ78_03870 PF02913 FAD linked oxidases, C-terminal domain LVJ78_03870 PF01565 FAD binding domain LVJ78_03875 PF05675 Protein of unknown function (DUF817) LVJ78_03880 PF01565 FAD binding domain LVJ78_03885 PF02754 Cysteine-rich domain LVJ78_03885 PF13183 4Fe-4S dicluster domain LVJ78_03890 PF01274 Malate synthase LVJ78_03895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LVJ78_03895 PF00512 His Kinase A (phospho-acceptor) domain LVJ78_03900 PF00072 Response regulator receiver domain LVJ78_03900 PF00486 Transcriptional regulatory protein, C terminal LVJ78_03910 PF03976 Polyphosphate kinase 2 (PPK2) LVJ78_03915 PF04216 Protein involved in formate dehydrogenase formation LVJ78_03920 PF02634 FdhD/NarQ family LVJ78_03925 PF01292 Prokaryotic cytochrome b561 LVJ78_03930 PF09163 Formate dehydrogenase N, transmembrane LVJ78_03930 PF13247 4Fe-4S dicluster domain LVJ78_03940 PF00440 Bacterial regulatory proteins, tetR family LVJ78_03940 PF08359 YsiA-like protein, C-terminal region LVJ78_03945 PF01565 FAD binding domain LVJ78_03945 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain LVJ78_03950 PF01554 MatE LVJ78_03965 PF01266 FAD dependent oxidoreductase LVJ78_03970 PF00528 Binding-protein-dependent transport system inner membrane component LVJ78_03975 PF00528 Binding-protein-dependent transport system inner membrane component LVJ78_03980 PF08402 TOBE domain LVJ78_03980 PF00005 ABC transporter LVJ78_03990 PF00291 Pyridoxal-phosphate dependent enzyme LVJ78_04005 PF01725 Ham1 family LVJ78_04015 PF06804 NlpB/DapX lipoprotein LVJ78_04020 PF00701 Dihydrodipicolinate synthetase family LVJ78_04025 PF00860 Permease family LVJ78_04030 PF00528 Binding-protein-dependent transport system inner membrane component LVJ78_04035 PF00005 ABC transporter LVJ78_04040 PF04069 Substrate binding domain of ABC-type glycine betaine transport system LVJ78_04045 PF02668 Taurine catabolism dioxygenase TauD, TfdA family LVJ78_04050 PF03449 Transcription elongation factor, N-terminal LVJ78_04050 PF01272 Transcription elongation factor, GreA/GreB, C-term LVJ78_04055 PF00444 Ribosomal protein L36 LVJ78_04060 PF01197 Ribosomal protein L31 LVJ78_04065 PF12161 HsdM N-terminal domain LVJ78_04065 PF02384 N-6 DNA Methylase LVJ78_04090 PF04345 Chorismate lyase LVJ78_04095 PF01040 UbiA prenyltransferase family LVJ78_04100 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LVJ78_04105 PF07475 HPr Serine kinase C-terminal domain LVJ78_04105 PF02603 HPr Serine kinase N terminus LVJ78_04110 PF03668 P-loop ATPase protein family LVJ78_04115 PF01926 50S ribosome-binding GTPase LVJ78_04125 PF04079 Segregation and condensation complex subunit ScpB LVJ78_04130 PF01479 S4 domain LVJ78_04130 PF00849 RNA pseudouridylate synthase LVJ78_04140 PF00535 Glycosyl transferase family 2 LVJ78_04145 PF02540 NAD synthase LVJ78_04145 PF00958 GMP synthase C terminal domain LVJ78_04145 PF00117 Glutamine amidotransferase class-I LVJ78_04160 PF01668 SmpB protein LVJ78_04175 PF00313 'Cold-shock' DNA-binding domain LVJ78_04180 PF02617 ATP-dependent Clp protease adaptor protein ClpS LVJ78_04185 PF00004 ATPase family associated with various cellular activities (AAA) LVJ78_04185 PF17871 AAA lid domain LVJ78_04185 PF02861 Clp amino terminal domain, pathogenicity island component LVJ78_04185 PF07724 AAA domain (Cdc48 subfamily) LVJ78_04185 PF10431 C-terminal, D2-small domain, of ClpB protein LVJ78_04190 PF00561 alpha/beta hydrolase fold LVJ78_04195 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LVJ78_04195 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LVJ78_04200 PF00230 Major intrinsic protein LVJ78_04210 PF00271 Helicase conserved C-terminal domain LVJ78_04210 PF04851 Type III restriction enzyme, res subunit LVJ78_04210 PF02151 UvrB/uvrC motif LVJ78_04210 PF17757 UvrB interaction domain LVJ78_04210 PF12344 Ultra-violet resistance protein B LVJ78_04230 PF07690 Major Facilitator Superfamily LVJ78_04240 PF01979 Amidohydrolase family LVJ78_04245 PF01047 MarR family LVJ78_04250 PF02347 Glycine cleavage system P-protein LVJ78_04260 PF13472 GDSL-like Lipase/Acylhydrolase family LVJ78_04265 PF07690 Major Facilitator Superfamily LVJ78_04270 PF13847 Methyltransferase domain LVJ78_04275 PF13673 Acetyltransferase (GNAT) domain LVJ78_04275 PF03352 Methyladenine glycosylase LVJ78_04275 PF00117 Glutamine amidotransferase class-I LVJ78_04275 PF13302 Acetyltransferase (GNAT) domain LVJ78_04275 PF00958 GMP synthase C terminal domain LVJ78_04280 PF01177 Asp/Glu/Hydantoin racemase LVJ78_04285 PF01597 Glycine cleavage H-protein LVJ78_04290 PF01571 Aminomethyltransferase folate-binding domain LVJ78_04290 PF08669 Glycine cleavage T-protein C-terminal barrel domain LVJ78_04295 PF01037 Lrp/AsnC ligand binding domain LVJ78_04305 PF04304 Protein of unknown function (DUF454) LVJ78_04320 PF02028 BCCT, betaine/carnitine/choline family transporter LVJ78_04325 PF00732 GMC oxidoreductase LVJ78_04325 PF05199 GMC oxidoreductase LVJ78_04335 PF00171 Aldehyde dehydrogenase family LVJ78_04350 PF00883 Cytosol aminopeptidase family, catalytic domain LVJ78_04365 PF01520 N-acetylmuramoyl-L-alanine amidase LVJ78_04365 PF11741 AMIN domain LVJ78_04370 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE LVJ78_04375 PF01177 Asp/Glu/Hydantoin racemase LVJ78_04385 PF02683 Cytochrome C biogenesis protein transmembrane region LVJ78_04385 PF00085 Thioredoxin LVJ78_04385 PF11412 Disulphide bond corrector protein DsbC LVJ78_04390 PF01614 Bacterial transcriptional regulator LVJ78_04390 PF09339 IclR helix-turn-helix domain LVJ78_04395 PF00202 Aminotransferase class-III LVJ78_04400 PF00171 Aldehyde dehydrogenase family LVJ78_04410 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family LVJ78_04410 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain LVJ78_04420 PF02616 Segregation and condensation protein ScpA LVJ78_04425 PF00899 ThiF family LVJ78_04430 PF00582 Universal stress protein family LVJ78_04435 PF02798 Glutathione S-transferase, N-terminal domain LVJ78_04435 PF00043 Glutathione S-transferase, C-terminal domain LVJ78_04450 PF03060 Nitronate monooxygenase LVJ78_04455 PF00128 Alpha amylase, catalytic domain LVJ78_04485 PF03795 YCII-related domain LVJ78_04490 PF04279 Intracellular septation protein A LVJ78_04500 PF01416 tRNA pseudouridine synthase LVJ78_04505 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase LVJ78_04510 PF00291 Pyridoxal-phosphate dependent enzyme LVJ78_04525 PF05167 Uncharacterised ACR (DUF711) LVJ78_04545 PF00925 GTP cyclohydrolase II LVJ78_04565 PF00128 Alpha amylase, catalytic domain LVJ78_04565 PF02806 Alpha amylase, C-terminal all-beta domain LVJ78_04565 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LVJ78_04570 PF18390 Glycogen debranching enzyme C-terminal domain LVJ78_04570 PF00128 Alpha amylase, catalytic domain LVJ78_04570 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LVJ78_04575 PF00483 Nucleotidyl transferase LVJ78_04580 PF00534 Glycosyl transferases group 1 LVJ78_04580 PF08323 Starch synthase catalytic domain LVJ78_04585 PF00343 Carbohydrate phosphorylase LVJ78_04590 PF00403 Heavy-metal-associated domain LVJ78_04620 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) LVJ78_04620 PF06594 Haemolysin-type calcium binding protein related domain LVJ78_04625 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) LVJ78_04625 PF06594 Haemolysin-type calcium binding protein related domain LVJ78_04630 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase LVJ78_04635 PF03812 2-keto-3-deoxygluconate permease LVJ78_04645 PF02652 L-lactate permease LVJ78_04650 PF00392 Bacterial regulatory proteins, gntR family LVJ78_04650 PF07702 UTRA domain LVJ78_04655 PF01266 FAD dependent oxidoreductase LVJ78_04655 PF05430 S-adenosyl-L-methionine-dependent methyltransferase LVJ78_04665 PF00793 DAHP synthetase I family LVJ78_04665 PF18152 DAHP synthase ferredoxin-like domain LVJ78_04670 PF17191 RecG wedge domain LVJ78_04670 PF00270 DEAD/DEAH box helicase LVJ78_04670 PF00271 Helicase conserved C-terminal domain LVJ78_04680 PF00528 Binding-protein-dependent transport system inner membrane component LVJ78_04685 PF06574 FAD synthetase LVJ78_04685 PF01687 Riboflavin kinase LVJ78_04690 PF08264 Anticodon-binding domain of tRNA LVJ78_04690 PF06827 Zinc finger found in FPG and IleRS LVJ78_04690 PF00133 tRNA synthetases class I (I, L, M and V) LVJ78_04705 PF13358 DDE superfamily endonuclease LVJ78_04710 PF00085 Thioredoxin LVJ78_04715 PF00005 ABC transporter LVJ78_04715 PF09383 NIL domain LVJ78_04720 PF03649 Uncharacterised protein family (UPF0014) LVJ78_04725 PF01252 Signal peptidase (SPase) II LVJ78_04730 PF02401 LytB protein LVJ78_04735 PF00209 Sodium:neurotransmitter symporter family LVJ78_04740 PF00892 EamA-like transporter family LVJ78_04775 PF01702 Queuine tRNA-ribosyltransferase LVJ78_04785 PF03129 Anticodon binding domain LVJ78_04785 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LVJ78_04785 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LVJ78_04785 PF02824 TGS domain LVJ78_04790 PF00707 Translation initiation factor IF-3, C-terminal domain LVJ78_04790 PF05198 Translation initiation factor IF-3, N-terminal domain LVJ78_04795 PF01632 Ribosomal protein L35 LVJ78_04800 PF00453 Ribosomal protein L20 LVJ78_04805 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain LVJ78_04805 PF01409 tRNA synthetases class II core domain (F) LVJ78_04810 PF08780 Nucleotidyltransferase substrate binding protein like LVJ78_04815 PF03484 tRNA synthetase B5 domain LVJ78_04815 PF03147 Ferredoxin-fold anticodon binding domain LVJ78_04815 PF01588 Putative tRNA binding domain LVJ78_04815 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain LVJ78_04815 PF03483 B3/4 domain LVJ78_04820 PF00216 Bacterial DNA-binding protein LVJ78_04845 PF00550 Phosphopantetheine attachment site LVJ78_04850 PF00550 Phosphopantetheine attachment site LVJ78_04865 PF00535 Glycosyl transferase family 2 LVJ78_04905 PF04820 Tryptophan halogenase LVJ78_04915 PF00109 Beta-ketoacyl synthase, N-terminal domain LVJ78_04915 PF02801 Beta-ketoacyl synthase, C-terminal domain LVJ78_04930 PF02801 Beta-ketoacyl synthase, C-terminal domain LVJ78_04930 PF00109 Beta-ketoacyl synthase, N-terminal domain LVJ78_04935 PF00939 Sodium:sulfate symporter transmembrane region LVJ78_04940 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region LVJ78_04940 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit LVJ78_04940 PF10531 SLBB domain LVJ78_04945 PF00890 FAD binding domain LVJ78_04945 PF02910 Fumarate reductase flavoprotein C-term LVJ78_04955 PF00689 Cation transporting ATPase, C-terminus LVJ78_04955 PF00690 Cation transporter/ATPase, N-terminus LVJ78_04960 PF00180 Isocitrate/isopropylmalate dehydrogenase LVJ78_04975 PF07664 Ferrous iron transport protein B C terminus LVJ78_04975 PF17910 FeoB cytosolic helical domain LVJ78_04975 PF02421 Ferrous iron transport protein B LVJ78_04975 PF07670 Nucleoside recognition LVJ78_04990 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal LVJ78_04990 PF02769 AIR synthase related protein, C-terminal domain LVJ78_04990 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain LVJ78_04995 PF00543 Nitrogen regulatory protein P-II LVJ78_05005 PF00970 Oxidoreductase FAD-binding domain LVJ78_05005 PF00111 2Fe-2S iron-sulfur cluster binding domain LVJ78_05005 PF00175 Oxidoreductase NAD-binding domain LVJ78_05020 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LVJ78_05020 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LVJ78_05025 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain LVJ78_05025 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain LVJ78_05025 PF01276 Orn/Lys/Arg decarboxylase, major domain LVJ78_05045 PF03572 Peptidase family S41 LVJ78_05045 PF13180 PDZ domain LVJ78_05050 PF01551 Peptidase family M23 LVJ78_05055 PF02622 Uncharacterized ACR, COG1678 LVJ78_05060 PF03652 Holliday junction resolvase LVJ78_05065 PF06078 Bacterial protein of unknown function (DUF937) LVJ78_05070 PF00696 Amino acid kinase family LVJ78_05085 PF00528 Binding-protein-dependent transport system inner membrane component LVJ78_05090 PF00005 ABC transporter LVJ78_05090 PF12857 TOBE-like domain LVJ78_05100 PF00817 impB/mucB/samB family LVJ78_05100 PF11799 impB/mucB/samB family C-terminal domain LVJ78_05100 PF11798 IMS family HHH motif LVJ78_05105 PF02698 DUF218 domain LVJ78_05110 PF00501 AMP-binding enzyme LVJ78_05110 PF13193 AMP-binding enzyme C-terminal domain LVJ78_05130 PF00501 AMP-binding enzyme LVJ78_05130 PF13193 AMP-binding enzyme C-terminal domain LVJ78_05150 PF17831 Pyruvate dehydrogenase E1 component middle domain LVJ78_05150 PF00456 Transketolase, thiamine diphosphate binding domain LVJ78_05155 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LVJ78_05155 PF00364 Biotin-requiring enzyme LVJ78_05155 PF02817 e3 binding domain LVJ78_05160 PF07992 Pyridine nucleotide-disulphide oxidoreductase LVJ78_05160 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LVJ78_05165 PF00194 Eukaryotic-type carbonic anhydrase LVJ78_05175 PF03550 Outer membrane lipoprotein LolB LVJ78_05180 PF08544 GHMP kinases C terminal LVJ78_05180 PF00288 GHMP kinases N terminal domain LVJ78_05195 PF14572 Phosphoribosyl synthetase-associated domain LVJ78_05195 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase LVJ78_05200 PF01386 Ribosomal L25p family LVJ78_05200 PF14693 Ribosomal protein TL5, C-terminal domain LVJ78_05210 PF00664 ABC transporter transmembrane region LVJ78_05210 PF03412 Peptidase C39 family LVJ78_05210 PF00005 ABC transporter LVJ78_05220 PF00072 Response regulator receiver domain LVJ78_05220 PF00196 Bacterial regulatory proteins, luxR family LVJ78_05225 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term LVJ78_05225 PF07730 Histidine kinase LVJ78_05225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LVJ78_05225 PF00672 HAMP domain LVJ78_05235 PF02391 MoaE protein LVJ78_05240 PF12804 MobA-like NTP transferase domain LVJ78_05245 PF03454 MoeA C-terminal region (domain IV) LVJ78_05245 PF03453 MoeA N-terminal region (domain I and II) LVJ78_05245 PF00994 Probable molybdopterin binding domain LVJ78_05255 PF00106 short chain dehydrogenase LVJ78_05260 PF03928 Haem-degrading LVJ78_05270 PF00171 Aldehyde dehydrogenase family LVJ78_05280 PF00106 short chain dehydrogenase LVJ78_05355 PF02661 Fic/DOC family LVJ78_05355 PF13784 Fic/DOC family N-terminal LVJ78_05360 PF00589 Phage integrase family LVJ78_05360 PF13356 Arm DNA-binding domain LVJ78_05385 PF04384 Iron-sulphur cluster assembly LVJ78_05390 PF00111 2Fe-2S iron-sulfur cluster binding domain LVJ78_05395 PF00012 Hsp70 protein LVJ78_05405 PF01593 Flavin containing amine oxidoreductase LVJ78_05410 PF00106 short chain dehydrogenase LVJ78_05415 PF03976 Polyphosphate kinase 2 (PPK2) LVJ78_05420 PF07690 Major Facilitator Superfamily LVJ78_05425 PF07690 Major Facilitator Superfamily LVJ78_05425 PF00083 Sugar (and other) transporter LVJ78_05435 PF02423 Ornithine cyclodeaminase/mu-crystallin family LVJ78_05440 PF01619 Proline dehydrogenase LVJ78_05440 PF14850 DNA-binding domain of Proline dehydrogenase LVJ78_05440 PF18327 Proline utilization A proline dehydrogenase N-terminal domain LVJ78_05440 PF00171 Aldehyde dehydrogenase family LVJ78_05445 PF13538 UvrD-like helicase C-terminal domain LVJ78_05465 PF03960 ArsC family LVJ78_05470 PF00149 Calcineurin-like phosphoesterase LVJ78_05485 PF10414 Sirohaem synthase dimerisation region LVJ78_05485 PF14824 Sirohaem biosynthesis protein central LVJ78_05485 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LVJ78_05495 PF09285 Elongation factor P, C-terminal LVJ78_05495 PF08207 Elongation factor P (EF-P) KOW-like domain LVJ78_05495 PF01132 Elongation factor P (EF-P) OB domain LVJ78_05505 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LVJ78_05505 PF02403 Seryl-tRNA synthetase N-terminal domain LVJ78_05510 PF00403 Heavy-metal-associated domain LVJ78_05520 PF08335 GlnD PII-uridylyltransferase LVJ78_05520 PF01966 HD domain LVJ78_05525 PF07690 Major Facilitator Superfamily LVJ78_05530 PF01381 Helix-turn-helix LVJ78_05535 PF01758 Sodium Bile acid symporter family LVJ78_05540 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LVJ78_05540 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LVJ78_05545 PF00772 DnaB-like helicase N terminal domain LVJ78_05545 PF03796 DnaB-like helicase C terminal domain LVJ78_05570 PF07963 Prokaryotic N-terminal methylation motif LVJ78_05570 PF00114 Pilin (bacterial filament) LVJ78_05585 PF13533 Biotin-lipoyl like LVJ78_05590 PF01596 O-methyltransferase LVJ78_05605 PF00005 ABC transporter LVJ78_05615 PF02321 Outer membrane efflux protein LVJ78_05655 PF00310 Glutamine amidotransferases class-II LVJ78_05655 PF04898 Glutamate synthase central domain LVJ78_05655 PF01645 Conserved region in glutamate synthase LVJ78_05655 PF01493 GXGXG motif LVJ78_05660 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LVJ78_05660 PF07992 Pyridine nucleotide-disulphide oxidoreductase LVJ78_05670 PF08534 Redoxin LVJ78_05675 PF04371 Porphyromonas-type peptidyl-arginine deiminase LVJ78_05680 PF00497 Bacterial extracellular solute-binding proteins, family 3 LVJ78_05685 PF02559 CarD-like/TRCF domain LVJ78_05685 PF00270 DEAD/DEAH box helicase LVJ78_05685 PF00271 Helicase conserved C-terminal domain LVJ78_05685 PF03461 TRCF domain LVJ78_05685 PF17757 UvrB interaction domain LVJ78_05700 PF00390 Malic enzyme, N-terminal domain LVJ78_05700 PF03949 Malic enzyme, NAD binding domain LVJ78_05715 PF02660 Glycerol-3-phosphate acyltransferase LVJ78_05720 PF02152 Dihydroneopterin aldolase LVJ78_05725 PF08461 Ribonuclease R winged-helix domain LVJ78_05725 PF00575 S1 RNA binding domain LVJ78_05725 PF17876 Cold shock domain LVJ78_05725 PF08206 Ribonuclease B OB domain LVJ78_05725 PF00773 RNB domain LVJ78_05740 PF00731 AIR carboxylase LVJ78_05750 PF01596 O-methyltransferase LVJ78_05760 PF01743 Poly A polymerase head domain LVJ78_05760 PF12626 Polymerase A arginine-rich C-terminus LVJ78_05760 PF12627 Probable RNA and SrmB- binding site of polymerase A LVJ78_05765 PF01553 Acyltransferase LVJ78_05770 PF00293 NUDIX domain LVJ78_05775 PF12794 Mechanosensitive ion channel inner membrane domain 1 LVJ78_05775 PF00924 Mechanosensitive ion channel LVJ78_05775 PF12795 Mechanosensitive ion channel porin domain LVJ78_05780 PF01250 Ribosomal protein S6 LVJ78_05790 PF01084 Ribosomal protein S18 LVJ78_05795 PF03948 Ribosomal protein L9, C-terminal domain LVJ78_05795 PF01281 Ribosomal protein L9, N-terminal domain LVJ78_05800 PF13406 Transglycosylase SLT domain LVJ78_05805 PF12169 DNA polymerase III subunits gamma and tau domain III LVJ78_05805 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding LVJ78_05805 PF12170 DNA polymerase III tau subunit V interacting with alpha LVJ78_05810 PF02575 YbaB/EbfC DNA-binding family LVJ78_05815 PF01488 Shikimate / quinate 5-dehydrogenase LVJ78_05815 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain LVJ78_05815 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain LVJ78_05820 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region LVJ78_05820 PF01243 Pyridoxamine 5'-phosphate oxidase LVJ78_05825 PF08543 Phosphomethylpyrimidine kinase LVJ78_05830 PF00009 Elongation factor Tu GTP binding domain LVJ78_05840 PF08240 Alcohol dehydrogenase GroES-like domain LVJ78_05840 PF00107 Zinc-binding dehydrogenase LVJ78_05850 PF01507 Phosphoadenosine phosphosulfate reductase family LVJ78_05855 PF01507 Phosphoadenosine phosphosulfate reductase family LVJ78_05860 PF04002 RadC-like JAB domain LVJ78_05865 PF00202 Aminotransferase class-III LVJ78_05870 PF00293 NUDIX domain LVJ78_05875 PF16123 Hydroxyacylglutathione hydrolase C-terminus LVJ78_05875 PF00753 Metallo-beta-lactamase superfamily LVJ78_05880 PF00588 SpoU rRNA Methylase family LVJ78_05880 PF08032 RNA 2'-O ribose methyltransferase substrate binding LVJ78_05885 PF02810 SEC-C motif LVJ78_05885 PF03695 Uncharacterised protein family (UPF0149) LVJ78_05890 PF00293 NUDIX domain LVJ78_05895 PF03232 Ubiquinone biosynthesis protein COQ7 LVJ78_05900 PF00719 Inorganic pyrophosphatase LVJ78_05910 PF01256 Carbohydrate kinase LVJ78_05915 PF03061 Thioesterase superfamily LVJ78_05920 PF00692 dUTPase LVJ78_05925 PF00294 pfkB family carbohydrate kinase LVJ78_05935 PF00204 DNA gyrase B LVJ78_05935 PF00986 DNA gyrase B subunit, carboxyl terminus LVJ78_05935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LVJ78_05935 PF01751 Toprim domain LVJ78_05940 PF00293 NUDIX domain LVJ78_05945 PF13416 Bacterial extracellular solute-binding protein LVJ78_05950 PF01975 Survival protein SurE LVJ78_05960 PF01551 Peptidase family M23 LVJ78_05960 PF01476 LysM domain LVJ78_05965 PF13358 DDE superfamily endonuclease LVJ78_05990 PF02463 RecF/RecN/SMC N terminal domain LVJ78_05995 PF01513 ATP-NAD kinase LVJ78_06005 PF01625 Peptide methionine sulfoxide reductase LVJ78_06010 PF07690 Major Facilitator Superfamily LVJ78_06015 PF00580 UvrD/REP helicase N-terminal domain LVJ78_06015 PF13361 UvrD-like helicase C-terminal domain LVJ78_06015 PF12705 PD-(D/E)XK nuclease superfamily LVJ78_06025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LVJ78_06025 PF03466 LysR substrate binding domain LVJ78_06030 PF03788 LrgA family LVJ78_06040 PF06288 Protein of unknown function (DUF1040) LVJ78_06045 PF00035 Double-stranded RNA binding motif LVJ78_06045 PF14622 Ribonuclease-III-like LVJ78_06050 PF01926 50S ribosome-binding GTPase LVJ78_06050 PF07650 KH domain LVJ78_06055 PF06962 Putative rRNA methylase LVJ78_06065 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) LVJ78_06075 PF02548 Ketopantoate hydroxymethyltransferase LVJ78_06085 PF02569 Pantoate-beta-alanine ligase LVJ78_06090 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain LVJ78_06090 PF02951 Prokaryotic glutathione synthetase, N-terminal domain LVJ78_06095 PF01219 Prokaryotic diacylglycerol kinase LVJ78_06100 PF01219 Prokaryotic diacylglycerol kinase LVJ78_06110 PF00665 Integrase core domain LVJ78_06110 PF13276 HTH-like domain LVJ78_06110 PF13333 Integrase core domain LVJ78_06120 PF05698 Bacterial trigger factor protein (TF) C-terminus LVJ78_06125 PF00679 Elongation factor G C-terminus LVJ78_06125 PF00009 Elongation factor Tu GTP binding domain LVJ78_06125 PF03144 Elongation factor Tu domain 2 LVJ78_06125 PF06421 GTP-binding protein LepA C-terminus LVJ78_06130 PF10502 Signal peptidase, peptidase S26 LVJ78_06135 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LVJ78_06135 PF07992 Pyridine nucleotide-disulphide oxidoreductase LVJ78_06140 PF08534 Redoxin LVJ78_06140 PF00462 Glutaredoxin LVJ78_06150 PF00742 Homoserine dehydrogenase LVJ78_06150 PF03447 Homoserine dehydrogenase, NAD binding domain LVJ78_06150 PF01842 ACT domain LVJ78_06160 PF13358 DDE superfamily endonuclease LVJ78_06170 PF00154 recA bacterial DNA recombination protein LVJ78_06175 PF03060 Nitronate monooxygenase LVJ78_06180 PF00149 Calcineurin-like phosphoesterase LVJ78_06185 PF01042 Endoribonuclease L-PSP LVJ78_06190 PF06969 HemN C-terminal domain LVJ78_06190 PF04055 Radical SAM superfamily LVJ78_06195 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LVJ78_06195 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LVJ78_06195 PF06827 Zinc finger found in FPG and IleRS LVJ78_06200 PF00206 Lyase LVJ78_06200 PF10415 Fumarase C C-terminus LVJ78_06205 PF01966 HD domain LVJ78_06205 PF01743 Poly A polymerase head domain LVJ78_06205 PF12627 Probable RNA and SrmB- binding site of polymerase A LVJ78_06210 PF02540 NAD synthase LVJ78_06225 PF00893 Small Multidrug Resistance protein LVJ78_06235 PF01209 ubiE/COQ5 methyltransferase family LVJ78_06240 PF00497 Bacterial extracellular solute-binding proteins, family 3 LVJ78_06245 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain LVJ78_06245 PF00749 tRNA synthetases class I (E and Q), catalytic domain LVJ78_06250 PF07497 Rho termination factor, RNA-binding domain LVJ78_06250 PF07498 Rho termination factor, N-terminal domain LVJ78_06250 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LVJ78_06255 PF01966 HD domain LVJ78_06270 PF00171 Aldehyde dehydrogenase family LVJ78_06295 PF18073 Rubredoxin metal binding domain LVJ78_06300 PF00939 Sodium:sulfate symporter transmembrane region LVJ78_06305 PF00005 ABC transporter LVJ78_06310 PF00528 Binding-protein-dependent transport system inner membrane component LVJ78_06315 PF00528 Binding-protein-dependent transport system inner membrane component LVJ78_06320 PF13407 Periplasmic binding protein domain LVJ78_06325 PF02653 Branched-chain amino acid transport system / permease component LVJ78_06330 PF00005 ABC transporter LVJ78_06335 PF05025 RbsD / FucU transport protein family LVJ78_06345 PF00677 Lumazine binding domain LVJ78_06350 PF03061 Thioesterase superfamily LVJ78_06355 PF01544 CorA-like Mg2+ transporter protein LVJ78_06360 PF02541 Ppx/GppA phosphatase family LVJ78_06365 PF06418 CTP synthase N-terminus LVJ78_06365 PF00117 Glutamine amidotransferase class-I LVJ78_06380 PF00834 Ribulose-phosphate 3 epimerase family LVJ78_06395 PF03883 Peroxide stress protein YaaA LVJ78_06405 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family LVJ78_06405 PF04055 Radical SAM superfamily LVJ78_06410 PF03099 Biotin/lipoate A/B protein ligase family LVJ78_06415 PF04359 Protein of unknown function (DUF493) LVJ78_06420 PF00004 ATPase family associated with various cellular activities (AAA) LVJ78_06420 PF05362 Lon protease (S16) C-terminal proteolytic domain LVJ78_06420 PF02190 ATP-dependent protease La (LON) substrate-binding domain LVJ78_06425 PF00216 Bacterial DNA-binding protein LVJ78_06430 PF00464 Serine hydroxymethyltransferase LVJ78_06440 PF00881 Nitroreductase family LVJ78_06445 PF04325 Protein of unknown function (DUF465) LVJ78_06450 PF00849 RNA pseudouridylate synthase LVJ78_06465 PF00180 Isocitrate/isopropylmalate dehydrogenase LVJ78_06470 PF02390 Putative methyltransferase LVJ78_06485 PF01042 Endoribonuclease L-PSP LVJ78_06490 PF04073 Aminoacyl-tRNA editing domain LVJ78_06510 PF00209 Sodium:neurotransmitter symporter family LVJ78_06515 PF00425 chorismate binding enzyme LVJ78_06515 PF04715 Anthranilate synthase component I, N terminal region LVJ78_06520 PF02803 Thiolase, C-terminal domain LVJ78_06520 PF00108 Thiolase, N-terminal domain LVJ78_06525 PF00330 Aconitase family (aconitate hydratase) LVJ78_06545 PF00694 Aconitase C-terminal domain LVJ78_06550 PF00474 Sodium:solute symporter family LVJ78_06555 PF00999 Sodium/hydrogen exchanger family LVJ78_06555 PF02254 TrkA-N domain LVJ78_06560 PF00709 Adenylosuccinate synthetase LVJ78_06565 PF13393 Histidyl-tRNA synthetase LVJ78_06585 PF00871 Acetokinase family LVJ78_06590 PF00877 NlpC/P60 family LVJ78_06595 PF13091 PLD-like domain LVJ78_06600 PF00291 Pyridoxal-phosphate dependent enzyme LVJ78_06600 PF00585 C-terminal regulatory domain of Threonine dehydratase LVJ78_06605 PF00768 D-alanyl-D-alanine carboxypeptidase LVJ78_06605 PF07943 Penicillin-binding protein 5, C-terminal domain LVJ78_06610 PF01070 FMN-dependent dehydrogenase LVJ78_06615 PF03618 Kinase/pyrophosphorylase LVJ78_06620 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain LVJ78_06620 PF02896 PEP-utilising enzyme, TIM barrel domain LVJ78_06620 PF00391 PEP-utilising enzyme, mobile domain LVJ78_06625 PF01226 Formate/nitrite transporter LVJ78_06630 PF02537 CrcB-like protein, Camphor Resistance (CrcB) LVJ78_06640 PF17854 FtsK alpha domain LVJ78_06640 PF09397 Ftsk gamma domain LVJ78_06640 PF01580 FtsK/SpoIIIE family LVJ78_06660 PF00497 Bacterial extracellular solute-binding proteins, family 3 LVJ78_06665 PF00155 Aminotransferase class I and II LVJ78_06680 PF00111 2Fe-2S iron-sulfur cluster binding domain LVJ78_06685 PF00268 Ribonucleotide reductase, small chain LVJ78_06690 PF03477 ATP cone domain LVJ78_06690 PF02867 Ribonucleotide reductase, barrel domain LVJ78_06690 PF00317 Ribonucleotide reductase, all-alpha domain LVJ78_06695 PF17209 Hfq protein LVJ78_06700 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal LVJ78_06700 PF01926 50S ribosome-binding GTPase LVJ78_06705 PF09976 Tetratricopeptide repeat-like domain LVJ78_06710 PF03129 Anticodon binding domain LVJ78_06710 PF13393 Histidyl-tRNA synthetase LVJ78_06715 PF04551 GcpE protein LVJ78_06730 PF04055 Radical SAM superfamily LVJ78_06735 PF00334 Nucleoside diphosphate kinase LVJ78_06740 PF03969 AFG1-like ATPase LVJ78_06745 PF00216 Bacterial DNA-binding protein LVJ78_06750 PF00575 S1 RNA binding domain LVJ78_06755 PF02224 Cytidylate kinase LVJ78_06760 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LVJ78_06765 PF00860 Permease family LVJ78_06770 PF05958 tRNA (Uracil-5-)-methyltransferase LVJ78_06785 PF02132 RecR protein LVJ78_06785 PF13662 Toprim domain LVJ78_06790 PF00756 Putative esterase LVJ78_06795 PF04055 Radical SAM superfamily LVJ78_06800 PF01228 Glycine radical LVJ78_06800 PF02901 Pyruvate formate lyase-like LVJ78_06805 PF02913 FAD linked oxidases, C-terminal domain LVJ78_06805 PF01565 FAD binding domain LVJ78_06820 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LVJ78_06825 PF00574 Clp protease LVJ78_06830 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LVJ78_06830 PF05698 Bacterial trigger factor protein (TF) C-terminus LVJ78_06830 PF05697 Bacterial trigger factor protein (TF) LVJ78_06840 PF00588 SpoU rRNA Methylase family LVJ78_06845 PF00459 Inositol monophosphatase family LVJ78_06850 PF01048 Phosphorylase superfamily LVJ78_06855 PF00994 Probable molybdopterin binding domain LVJ78_06860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LVJ78_06860 PF03466 LysR substrate binding domain LVJ78_06865 PF01810 LysE type translocator LVJ78_06870 PF00551 Formyl transferase LVJ78_06880 PF01189 16S rRNA methyltransferase RsmB/F LVJ78_06880 PF01029 NusB family LVJ78_06885 PF00462 Glutaredoxin LVJ78_06900 PF00561 alpha/beta hydrolase fold LVJ78_06900 PF07021 Methionine biosynthesis protein MetW LVJ78_06905 PF00561 alpha/beta hydrolase fold LVJ78_06915 PF04286 Protein of unknown function (DUF445) LVJ78_06920 PF00920 Dehydratase family LVJ78_06925 PF01790 Prolipoprotein diacylglyceryl transferase LVJ78_06930 PF03605 Anaerobic c4-dicarboxylate membrane transporter LVJ78_06935 PF01228 Glycine radical LVJ78_06940 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LVJ78_06940 PF01411 tRNA synthetases class II (A) LVJ78_06940 PF02272 DHHA1 domain LVJ78_06945 PF13416 Bacterial extracellular solute-binding protein LVJ78_06950 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LVJ78_06955 PF00296 Luciferase-like monooxygenase LVJ78_06965 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LVJ78_06965 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LVJ78_06970 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ LVJ78_06980 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain LVJ78_06985 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LVJ78_06995 PF00085 Thioredoxin LVJ78_07000 PF00005 ABC transporter LVJ78_07000 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LVJ78_07005 PF00528 Binding-protein-dependent transport system inner membrane component LVJ78_07005 PF12911 N-terminal TM domain of oligopeptide transport permease C LVJ78_07010 PF00583 Acetyltransferase (GNAT) family LVJ78_07015 PF00528 Binding-protein-dependent transport system inner membrane component LVJ78_07025 PF01053 Cys/Met metabolism PLP-dependent enzyme LVJ78_07030 PF00156 Phosphoribosyl transferase domain LVJ78_07045 PF02875 Mur ligase family, glutamate ligase domain LVJ78_07045 PF08245 Mur ligase middle domain LVJ78_07060 PF00474 Sodium:solute symporter family LVJ78_07065 PF04341 Protein of unknown function, DUF485 LVJ78_07070 PF03466 LysR substrate binding domain LVJ78_07070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LVJ78_07075 PF16326 ABC transporter C-terminal domain LVJ78_07075 PF12848 ABC transporter LVJ78_07075 PF00005 ABC transporter LVJ78_07080 PF00149 Calcineurin-like phosphoesterase LVJ78_07080 PF10518 TAT (twin-arginine translocation) pathway signal sequence LVJ78_07090 PF02322 Cytochrome bd terminal oxidase subunit II LVJ78_07095 PF01654 Cytochrome bd terminal oxidase subunit I LVJ78_07100 PF00664 ABC transporter transmembrane region LVJ78_07100 PF00005 ABC transporter LVJ78_07105 PF00664 ABC transporter transmembrane region LVJ78_07105 PF00005 ABC transporter LVJ78_07110 PF02583 Metal-sensitive transcriptional repressor LVJ78_07115 PF08240 Alcohol dehydrogenase GroES-like domain LVJ78_07115 PF00107 Zinc-binding dehydrogenase LVJ78_07120 PF01256 Carbohydrate kinase LVJ78_07120 PF03853 YjeF-related protein N-terminus LVJ78_07125 PF00005 ABC transporter LVJ78_07130 PF02687 FtsX-like permease family LVJ78_07130 PF12704 MacB-like periplasmic core domain LVJ78_07135 PF00107 Zinc-binding dehydrogenase LVJ78_07135 PF08240 Alcohol dehydrogenase GroES-like domain LVJ78_07150 PF03462 PCRF domain LVJ78_07150 PF00472 RF-1 domain LVJ78_07155 PF01648 4'-phosphopantetheinyl transferase superfamily LVJ78_07165 PF00132 Bacterial transferase hexapeptide (six repeats) LVJ78_07165 PF14602 Hexapeptide repeat of succinyl-transferase LVJ78_07165 PF12464 Maltose acetyltransferase LVJ78_07170 PF03989 DNA gyrase C-terminal domain, beta-propeller LVJ78_07170 PF00521 DNA gyrase/topoisomerase IV, subunit A LVJ78_07175 PF07694 5TMR of 5TMR-LYT LVJ78_07175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LVJ78_07175 PF06580 Histidine kinase LVJ78_07180 PF14698 Argininosuccinate lyase C-terminal LVJ78_07180 PF00206 Lyase LVJ78_07185 PF01171 PP-loop family LVJ78_07190 PF04306 Protein of unknown function (DUF456) LVJ78_07195 PF00154 recA bacterial DNA recombination protein LVJ78_07200 PF00376 MerR family regulatory protein LVJ78_07200 PF09278 MerR, DNA binding LVJ78_07205 PF01925 Sulfite exporter TauE/SafE LVJ78_07215 PF01206 Sulfurtransferase TusA LVJ78_07225 PF01979 Amidohydrolase family LVJ78_07230 PF01464 Transglycosylase SLT domain LVJ78_07230 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain LVJ78_07235 PF00271 Helicase conserved C-terminal domain LVJ78_07235 PF00270 DEAD/DEAH box helicase LVJ78_07245 PF00155 Aminotransferase class I and II LVJ78_07250 PF00579 tRNA synthetases class I (W and Y) LVJ78_07280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LVJ78_07280 PF03459 TOBE domain LVJ78_07285 PF01568 Molydopterin dinucleotide binding domain LVJ78_07285 PF14710 Respiratory nitrate reductase alpha N-terminal LVJ78_07285 PF00384 Molybdopterin oxidoreductase LVJ78_07290 PF13247 4Fe-4S dicluster domain LVJ78_07290 PF14711 Respiratory nitrate reductase beta C-terminal LVJ78_07295 PF02613 Nitrate reductase delta subunit LVJ78_07300 PF02665 Nitrate reductase gamma subunit LVJ78_07305 PF02222 ATP-grasp domain LVJ78_07305 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain LVJ78_07310 PF00583 Acetyltransferase (GNAT) family LVJ78_07315 PF07690 Major Facilitator Superfamily LVJ78_07320 PF03466 LysR substrate binding domain LVJ78_07320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LVJ78_07325 PF00171 Aldehyde dehydrogenase family LVJ78_07330 PF00107 Zinc-binding dehydrogenase LVJ78_07330 PF08240 Alcohol dehydrogenase GroES-like domain LVJ78_07335 PF13378 Enolase C-terminal domain-like LVJ78_07335 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LVJ78_07340 PF02426 Muconolactone delta-isomerase LVJ78_07345 PF00775 Dioxygenase LVJ78_07345 PF04444 Catechol dioxygenase N terminus LVJ78_07350 PF00355 Rieske [2Fe-2S] domain LVJ78_07350 PF00848 Ring hydroxylating alpha subunit (catalytic domain) LVJ78_07355 PF00866 Ring hydroxylating beta subunit LVJ78_07360 PF00111 2Fe-2S iron-sulfur cluster binding domain LVJ78_07360 PF00175 Oxidoreductase NAD-binding domain LVJ78_07360 PF00970 Oxidoreductase FAD-binding domain LVJ78_07365 PF00106 short chain dehydrogenase LVJ78_07370 PF03594 Benzoate membrane transport protein LVJ78_07375 PF01144 Coenzyme A transferase LVJ78_07380 PF01144 Coenzyme A transferase LVJ78_07385 PF00108 Thiolase, N-terminal domain LVJ78_07385 PF02803 Thiolase, C-terminal domain LVJ78_07390 PF12146 Serine aminopeptidase, S33 LVJ78_07410 PF12848 ABC transporter LVJ78_07410 PF00005 ABC transporter LVJ78_07415 PF05191 Adenylate kinase, active site lid LVJ78_07425 PF02348 Cytidylyltransferase LVJ78_07430 PF03966 Trm112p-like protein LVJ78_07435 PF02606 Tetraacyldisaccharide-1-P 4'-kinase LVJ78_07440 PF13742 OB-fold nucleic acid binding domain LVJ78_07440 PF02601 Exonuclease VII, large subunit LVJ78_07445 PF01551 Peptidase family M23 LVJ78_07445 PF01476 LysM domain LVJ78_07450 PF01814 Hemerythrin HHE cation binding domain LVJ78_07455 PF07690 Major Facilitator Superfamily LVJ78_07460 PF07690 Major Facilitator Superfamily LVJ78_07465 PF00155 Aminotransferase class I and II LVJ78_07470 PF08241 Methyltransferase domain LVJ78_07475 PF00933 Glycosyl hydrolase family 3 N terminal domain LVJ78_07480 PF13180 PDZ domain LVJ78_07480 PF17820 PDZ domain LVJ78_07485 PF10576 Iron-sulfur binding domain of endonuclease III LVJ78_07485 PF00633 Helix-hairpin-helix motif LVJ78_07485 PF00730 HhH-GPD superfamily base excision DNA repair protein LVJ78_07495 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) LVJ78_07500 PF02542 YgbB family LVJ78_07505 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase LVJ78_07510 PF00929 Exonuclease LVJ78_07520 PF00849 RNA pseudouridylate synthase LVJ78_07520 PF01479 S4 domain LVJ78_07525 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LVJ78_07525 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LVJ78_07535 PF13419 Haloacid dehalogenase-like hydrolase LVJ78_07540 PF16916 Dimerisation domain of Zinc Transporter LVJ78_07540 PF01545 Cation efflux family LVJ78_07545 PF04305 Protein of unknown function (DUF455) LVJ78_07550 PF03548 Outer membrane lipoprotein carrier protein LolA LVJ78_07555 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LVJ78_07565 PF00303 Thymidylate synthase LVJ78_07570 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase LVJ78_07570 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain LVJ78_07575 PF01594 AI-2E family transporter LVJ78_07580 PF01063 Amino-transferase class IV LVJ78_07595 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LVJ78_07600 PF02618 YceG-like family LVJ78_07605 PF02223 Thymidylate kinase LVJ78_07610 PF09115 DNA polymerase III, delta subunit, C terminal LVJ78_07620 PF01026 TatD related DNase LVJ78_07625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LVJ78_07625 PF03466 LysR substrate binding domain LVJ78_07630 PF07690 Major Facilitator Superfamily LVJ78_07635 PF00248 Aldo/keto reductase family LVJ78_07640 PF02566 OsmC-like protein LVJ78_07645 PF03099 Biotin/lipoate A/B protein ligase family LVJ78_07645 PF12706 Beta-lactamase superfamily domain LVJ78_07650 PF13358 DDE superfamily endonuclease LVJ78_07660 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB LVJ78_07660 PF17287 POTRA domain LVJ78_07660 PF08479 POTRA domain, ShlB-type LVJ78_07665 PF04829 Pre-toxin domain with VENN motif LVJ78_07665 PF05860 haemagglutination activity domain LVJ78_07665 PF13332 Hemagglutinin repeat LVJ78_07665 PF13018 Extended Signal Peptide of Type V secretion system LVJ78_07675 PF04829 Pre-toxin domain with VENN motif LVJ78_07675 PF05860 haemagglutination activity domain LVJ78_07675 PF13332 Hemagglutinin repeat LVJ78_07675 PF05594 Haemagluttinin repeat LVJ78_07680 PF00392 Bacterial regulatory proteins, gntR family LVJ78_07680 PF07702 UTRA domain LVJ78_07685 PF01261 Xylose isomerase-like TIM barrel LVJ78_07690 PF07690 Major Facilitator Superfamily LVJ78_07695 PF17484 N-Lobe handle Tf-binding protein B LVJ78_07695 PF01298 C-lobe and N-lobe beta barrels of Tf-binding protein B LVJ78_07695 PF17483 C-lobe handle domain of Tf-binding protein B LVJ78_07710 PF01476 LysM domain LVJ78_07710 PF01464 Transglycosylase SLT domain LVJ78_07710 PF01476 LysM domain LVJ78_07710 PF01464 Transglycosylase SLT domain LVJ78_07715 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LVJ78_07715 PF00925 GTP cyclohydrolase II LVJ78_07720 PF06800 Sugar transport protein LVJ78_07735 PF05195 Aminopeptidase P, N-terminal domain LVJ78_07735 PF00557 Metallopeptidase family M24 LVJ78_07740 PF01268 Formate--tetrahydrofolate ligase LVJ78_07745 PF01259 SAICAR synthetase LVJ78_07750 PF04977 Septum formation initiator LVJ78_07755 PF00113 Enolase, C-terminal TIM barrel domain LVJ78_07755 PF03952 Enolase, N-terminal domain LVJ78_07760 PF00571 CBS domain LVJ78_07760 PF00478 IMP dehydrogenase / GMP reductase domain LVJ78_07770 PF01541 GIY-YIG catalytic domain LVJ78_07770 PF08459 UvrC Helix-hairpin-helix N-terminal LVJ78_07770 PF02151 UvrB/uvrC motif LVJ78_07775 PF01066 CDP-alcohol phosphatidyltransferase LVJ78_07805 PF03485 Arginyl tRNA synthetase N terminal domain LVJ78_07805 PF05746 DALR anticodon binding domain LVJ78_07805 PF00750 tRNA synthetases class I (R) LVJ78_07810 PF00924 Mechanosensitive ion channel LVJ78_07820 PF02682 Carboxyltransferase domain, subdomain C and D LVJ78_07825 PF02626 Carboxyltransferase domain, subdomain A and B LVJ78_07830 PF03746 LamB/YcsF family LVJ78_07835 PF01566 Natural resistance-associated macrophage protein LVJ78_07845 PF16325 Peptidase family U32 C-terminal domain LVJ78_07845 PF01136 Peptidase family U32 LVJ78_07865 PF04143 Sulphur transport LVJ78_07875 PF16360 GTP-binding GTPase Middle Region LVJ78_07875 PF13167 GTP-binding GTPase N-terminal LVJ78_07875 PF01926 50S ribosome-binding GTPase LVJ78_07880 PF02666 Phosphatidylserine decarboxylase LVJ78_07885 PF07411 Domain of unknown function (DUF1508) LVJ78_07890 PF02492 CobW/HypB/UreG, nucleotide-binding domain LVJ78_07890 PF07683 Cobalamin synthesis protein cobW C-terminal domain LVJ78_07905 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LVJ78_07905 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LVJ78_07910 PF01546 Peptidase family M20/M25/M40 LVJ78_07910 PF07687 Peptidase dimerisation domain LVJ78_07915 PF00842 Alanine racemase, C-terminal domain LVJ78_07915 PF01168 Alanine racemase, N-terminal domain LVJ78_07920 PF01266 FAD dependent oxidoreductase LVJ78_07925 PF01037 Lrp/AsnC ligand binding domain LVJ78_07955 PF01381 Helix-turn-helix LVJ78_08015 PF00589 Phage integrase family LVJ78_08015 PF13356 Arm DNA-binding domain LVJ78_08015 PF14659 Phage integrase, N-terminal SAM-like domain LVJ78_08020 PF00970 Oxidoreductase FAD-binding domain LVJ78_08020 PF00175 Oxidoreductase NAD-binding domain LVJ78_08025 PF00226 DnaJ domain LVJ78_08025 PF01556 DnaJ C terminal domain LVJ78_08025 PF00684 DnaJ central domain LVJ78_08030 PF01039 Carboxyl transferase domain LVJ78_08030 PF17848 Acetyl-coA carboxylase zinc finger domain LVJ78_08035 PF00290 Tryptophan synthase alpha chain LVJ78_08040 PF13396 Phospholipase_D-nuclease N-terminal LVJ78_08040 PF13091 PLD-like domain LVJ78_08050 PF00692 dUTPase LVJ78_08055 PF04381 Putative exonuclease, RdgC LVJ78_08060 PF01914 MarC family integral membrane protein LVJ78_08065 PF03167 Uracil DNA glycosylase superfamily LVJ78_08070 PF00005 ABC transporter LVJ78_08075 PF00528 Binding-protein-dependent transport system inner membrane component LVJ78_08080 PF00497 Bacterial extracellular solute-binding proteins, family 3 LVJ78_08085 PF01435 Peptidase family M48 LVJ78_08090 PF04011 LemA family LVJ78_08095 PF01381 Helix-turn-helix LVJ78_08105 PF01119 DNA mismatch repair protein, C-terminal domain LVJ78_08105 PF08676 MutL C terminal dimerisation domain LVJ78_08115 PF12146 Serine aminopeptidase, S33 LVJ78_08115 PF12147 Putative methyltransferase LVJ78_08125 PF01066 CDP-alcohol phosphatidyltransferase LVJ78_08145 PF00782 Dual specificity phosphatase, catalytic domain LVJ78_08150 PF00248 Aldo/keto reductase family LVJ78_08155 PF01740 STAS domain LVJ78_08155 PF00916 Sulfate permease family LVJ78_08160 PF17755 UvrA DNA-binding domain LVJ78_08160 PF17760 UvrA interaction domain LVJ78_08175 PF06865 Pyrimidine/purine nucleoside phosphorylase LVJ78_08180 PF00226 DnaJ domain LVJ78_08180 PF01556 DnaJ C terminal domain LVJ78_08190 PF17763 Glutaminase/Asparaginase C-terminal domain LVJ78_08190 PF00710 Asparaginase, N-terminal LVJ78_08195 PF00491 Arginase family LVJ78_08200 PF09335 SNARE associated Golgi protein LVJ78_08205 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LVJ78_08205 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LVJ78_08205 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LVJ78_08205 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LVJ78_08210 PF00809 Pterin binding enzyme LVJ78_08220 PF01728 FtsJ-like methyltransferase LVJ78_08225 PF01985 CRS1 / YhbY (CRM) domain LVJ78_08235 PF03449 Transcription elongation factor, N-terminal LVJ78_08235 PF01272 Transcription elongation factor, GreA/GreB, C-term LVJ78_08240 PF00436 Single-strand binding protein family LVJ78_08245 PF07690 Major Facilitator Superfamily LVJ78_08250 PF00667 FAD binding domain LVJ78_08250 PF00175 Oxidoreductase NAD-binding domain LVJ78_08250 PF00258 Flavodoxin LVJ78_08255 PF01487 Type I 3-dehydroquinase LVJ78_08265 PF01048 Phosphorylase superfamily LVJ78_08270 PF00437 Type II/IV secretion system protein LVJ78_08285 PF07690 Major Facilitator Superfamily LVJ78_08295 PF13296 Putative type VI secretion system Rhs element Vgr LVJ78_08295 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) LVJ78_08295 PF04717 Type VI secretion system, phage-baseplate injector LVJ78_08300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LVJ78_08300 PF03466 LysR substrate binding domain LVJ78_08305 PF02129 X-Pro dipeptidyl-peptidase (S15 family) LVJ78_08315 PF12008 Type I restriction and modification enzyme - subunit R C terminal LVJ78_08315 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) LVJ78_08315 PF18766 SWI2/SNF2 ATPase LVJ78_08335 PF12161 HsdM N-terminal domain LVJ78_08335 PF02384 N-6 DNA Methylase LVJ78_08360 PF08240 Alcohol dehydrogenase GroES-like domain LVJ78_08360 PF00107 Zinc-binding dehydrogenase LVJ78_08370 PF02146 Sir2 family LVJ78_08375 PF00202 Aminotransferase class-III LVJ78_08380 PF02595 Glycerate kinase family LVJ78_08385 PF02447 GntP family permease LVJ78_08390 PF05651 Putative sugar diacid recognition LVJ78_08390 PF17853 GGDEF-like domain LVJ78_08390 PF13556 PucR C-terminal helix-turn-helix domain LVJ78_08400 PF10672 S-adenosylmethionine-dependent methyltransferase LVJ78_08410 PF00271 Helicase conserved C-terminal domain LVJ78_08410 PF00270 DEAD/DEAH box helicase LVJ78_08415 PF01218 Coproporphyrinogen III oxidase LVJ78_08420 PF07662 Na+ dependent nucleoside transporter C-terminus LVJ78_08420 PF01773 Na+ dependent nucleoside transporter N-terminus LVJ78_08420 PF07670 Nucleoside recognition LVJ78_08425 PF00578 AhpC/TSA family LVJ78_08435 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LVJ78_08435 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LVJ78_08440 PF03061 Thioesterase superfamily LVJ78_08445 PF02899 Phage integrase, N-terminal SAM-like domain LVJ78_08445 PF00589 Phage integrase family LVJ78_08450 PF14437 MafB19-like deaminase LVJ78_08465 PF04261 Dyp-type peroxidase family LVJ78_08470 PF01026 TatD related DNase LVJ78_08480 PF02554 Carbon starvation protein CstA LVJ78_08480 PF13722 5TM C-terminal transporter carbon starvation CstA LVJ78_08485 PF04328 Selenoprotein, putative LVJ78_08495 PF00155 Aminotransferase class I and II LVJ78_08510 PF00455 DeoR C terminal sensor domain LVJ78_08510 PF08220 DeoR-like helix-turn-helix domain LVJ78_08515 PF03956 Lysine exporter LysO LVJ78_08520 PF00175 Oxidoreductase NAD-binding domain LVJ78_08520 PF00970 Oxidoreductase FAD-binding domain LVJ78_08525 PF00005 ABC transporter LVJ78_08525 PF00664 ABC transporter transmembrane region LVJ78_08530 PF14821 Threonine synthase N terminus LVJ78_08530 PF00291 Pyridoxal-phosphate dependent enzyme LVJ78_08540 PF14602 Hexapeptide repeat of succinyl-transferase LVJ78_08540 PF12464 Maltose acetyltransferase LVJ78_08545 PF16193 AAA C-terminal domain LVJ78_08545 PF00004 ATPase family associated with various cellular activities (AAA) LVJ78_08545 PF12002 MgsA AAA+ ATPase C terminal LVJ78_08550 PF03949 Malic enzyme, NAD binding domain LVJ78_08550 PF01515 Phosphate acetyl/butaryl transferase LVJ78_08550 PF00390 Malic enzyme, N-terminal domain LVJ78_08560 PF12801 4Fe-4S binding domain LVJ78_08560 PF13746 4Fe-4S dicluster domain LVJ78_08560 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase LVJ78_08565 PF00392 Bacterial regulatory proteins, gntR family LVJ78_08565 PF00155 Aminotransferase class I and II LVJ78_08570 PF02233 NAD(P) transhydrogenase beta subunit LVJ78_08575 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LVJ78_08575 PF05222 Alanine dehydrogenase/PNT, N-terminal domain LVJ78_08575 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch LVJ78_08580 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LVJ78_08590 PF07715 TonB-dependent Receptor Plug Domain LVJ78_08590 PF04886 PT repeat LVJ78_08590 PF00593 TonB dependent receptor LVJ78_08595 PF13091 PLD-like domain LVJ78_08595 PF13396 Phospholipase_D-nuclease N-terminal LVJ78_08600 PF02082 Transcriptional regulator LVJ78_08605 PF00266 Aminotransferase class-V LVJ78_08610 PF01592 NifU-like N terminal domain LVJ78_08615 PF01258 Prokaryotic dksA/traR C4-type zinc finger LVJ78_08625 PF01521 Iron-sulphur cluster biosynthesis LVJ78_08630 PF00226 DnaJ domain LVJ78_08630 PF07743 HSCB C-terminal oligomerisation domain LVJ78_08665 PF00490 Delta-aminolevulinic acid dehydratase LVJ78_08675 PF04542 Sigma-70 region 2 LVJ78_08675 PF08281 Sigma-70, region 4 LVJ78_08680 PF01171 PP-loop family LVJ78_08680 PF09179 TilS substrate binding domain LVJ78_08685 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit LVJ78_08690 PF01479 S4 domain LVJ78_08695 PF04228 Putative neutral zinc metallopeptidase LVJ78_08700 PF00593 TonB dependent receptor LVJ78_08705 PF06472 ABC transporter transmembrane region 2 LVJ78_08705 PF00005 ABC transporter LVJ78_08775 PF01207 Dihydrouridine synthase (Dus) LVJ78_08780 PF01494 FAD binding domain LVJ78_08800 PF01494 FAD binding domain LVJ78_08805 PF02677 Epoxyqueuosine reductase QueH LVJ78_08810 PF00873 AcrB/AcrD/AcrF family LVJ78_08825 PF07690 Major Facilitator Superfamily LVJ78_08830 PF00800 Prephenate dehydratase LVJ78_08830 PF01817 Chorismate mutase type II LVJ78_08830 PF01842 ACT domain LVJ78_08835 PF03641 Possible lysine decarboxylase LVJ78_08860 PF03781 Sulfatase-modifying factor enzyme 1 LVJ78_08865 PF07732 Multicopper oxidase LVJ78_08870 PF00115 Cytochrome C and Quinol oxidase polypeptide I LVJ78_08875 PF09827 CRISPR associated protein Cas2 LVJ78_08880 PF01867 CRISPR associated protein Cas1 LVJ78_08915 PF00753 Metallo-beta-lactamase superfamily LVJ78_08915 PF03772 Competence protein LVJ78_08920 PF00588 SpoU rRNA Methylase family LVJ78_08920 PF08032 RNA 2'-O ribose methyltransferase substrate binding LVJ78_08930 PF01145 SPFH domain / Band 7 family LVJ78_08930 PF16200 C-terminal region of band_7 LVJ78_08945 PF00005 ABC transporter LVJ78_08945 PF12848 ABC transporter LVJ78_08950 PF00210 Ferritin-like domain LVJ78_08955 PF00210 Ferritin-like domain LVJ78_08960 PF00009 Elongation factor Tu GTP binding domain LVJ78_08960 PF03144 Elongation factor Tu domain 2 LVJ78_08960 PF00679 Elongation factor G C-terminus LVJ78_08970 PF07992 Pyridine nucleotide-disulphide oxidoreductase LVJ78_08975 PF00004 ATPase family associated with various cellular activities (AAA) LVJ78_08975 PF07724 AAA domain (Cdc48 subfamily) LVJ78_08975 PF17871 AAA lid domain LVJ78_08975 PF02861 Clp amino terminal domain, pathogenicity island component LVJ78_08975 PF10431 C-terminal, D2-small domain, of ClpB protein LVJ78_08980 PF00580 UvrD/REP helicase N-terminal domain LVJ78_08980 PF13361 UvrD-like helicase C-terminal domain LVJ78_08985 PF05525 Branched-chain amino acid transport protein LVJ78_08990 PF02578 Multi-copper polyphenol oxidoreductase laccase LVJ78_08995 PF01479 S4 domain LVJ78_08995 PF00849 RNA pseudouridylate synthase LVJ78_09000 PF13525 Outer membrane lipoprotein LVJ78_09005 PF13823 Alcohol dehydrogenase GroES-associated LVJ78_09005 PF00107 Zinc-binding dehydrogenase LVJ78_09005 PF08240 Alcohol dehydrogenase GroES-like domain LVJ78_09010 PF00633 Helix-hairpin-helix motif LVJ78_09010 PF10576 Iron-sulfur binding domain of endonuclease III LVJ78_09010 PF00730 HhH-GPD superfamily base excision DNA repair protein LVJ78_09010 PF14815 NUDIX domain LVJ78_09015 PF04399 Glutaredoxin 2, C terminal domain LVJ78_09015 PF13417 Glutathione S-transferase, N-terminal domain LVJ78_09020 PF02824 TGS domain LVJ78_09020 PF04607 Region found in RelA / SpoT proteins LVJ78_09020 PF13291 ACT domain LVJ78_09025 PF05016 ParE toxin of type II toxin-antitoxin system, parDE LVJ78_09040 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LVJ78_09040 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LVJ78_09040 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LVJ78_09040 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LVJ78_09045 PF01545 Cation efflux family LVJ78_09045 PF16916 Dimerisation domain of Zinc Transporter LVJ78_09055 PF00591 Glycosyl transferase family, a/b domain LVJ78_09055 PF02885 Glycosyl transferase family, helical bundle domain LVJ78_09060 PF00117 Glutamine amidotransferase class-I LVJ78_09065 PF03372 Endonuclease/Exonuclease/phosphatase family LVJ78_09070 PF17864 RuvB AAA lid domain LVJ78_09070 PF05491 RuvB C-terminal winged helix domain LVJ78_09070 PF05496 Holliday junction DNA helicase RuvB P-loop domain LVJ78_09080 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LVJ78_09085 PF02441 Flavoprotein LVJ78_09095 PF04403 Paraquat-inducible protein A LVJ78_09100 PF02470 MlaD protein LVJ78_09110 PF00005 ABC transporter LVJ78_09120 PF07715 TonB-dependent Receptor Plug Domain LVJ78_09120 PF00593 TonB dependent receptor LVJ78_09130 PF01497 Periplasmic binding protein LVJ78_09135 PF01032 FecCD transport family LVJ78_09155 PF00474 Sodium:solute symporter family LVJ78_09165 PF04127 DNA / pantothenate metabolism flavoprotein LVJ78_09165 PF02441 Flavoprotein LVJ78_09170 PF09827 CRISPR associated protein Cas2 LVJ78_09175 PF01867 CRISPR associated protein Cas1 LVJ78_09185 PF00849 RNA pseudouridylate synthase LVJ78_09185 PF01479 S4 domain LVJ78_09190 PF02926 THUMP domain LVJ78_09190 PF01170 Putative RNA methylase family UPF0020 LVJ78_09195 PF07690 Major Facilitator Superfamily LVJ78_09200 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LVJ78_09200 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LVJ78_09205 PF01232 Mannitol dehydrogenase Rossmann domain LVJ78_09205 PF08125 Mannitol dehydrogenase C-terminal domain LVJ78_09215 PF02938 GAD domain LVJ78_09215 PF01336 OB-fold nucleic acid binding domain LVJ78_09215 PF00152 tRNA synthetases class II (D, K and N) LVJ78_09225 PF02253 Phospholipase A1 LVJ78_09230 PF01649 Ribosomal protein S20 LVJ78_09235 PF13416 Bacterial extracellular solute-binding protein LVJ78_09240 PF06472 ABC transporter transmembrane region 2 LVJ78_09240 PF00005 ABC transporter LVJ78_09245 PF07715 TonB-dependent Receptor Plug Domain LVJ78_09245 PF00593 TonB dependent receptor LVJ78_09255 PF00892 EamA-like transporter family LVJ78_09260 PF01195 Peptidyl-tRNA hydrolase LVJ78_09265 PF03658 RnfH family Ubiquitin LVJ78_09270 PF03364 Polyketide cyclase / dehydrase and lipid transport LVJ78_09275 PF01758 Sodium Bile acid symporter family LVJ78_09280 PF03960 ArsC family LVJ78_09295 PF03471 Transporter associated domain LVJ78_09295 PF01595 Cyclin M transmembrane N-terminal domain LVJ78_09295 PF00571 CBS domain LVJ78_09320 PF18027 Cytosolic carboxypeptidase N-terminal domain LVJ78_09320 PF00246 Zinc carboxypeptidase LVJ78_09335 PF04390 Lipopolysaccharide-assembly LVJ78_09340 PF02637 GatB domain LVJ78_09340 PF02934 GatB/GatE catalytic domain LVJ78_09350 PF06414 Zeta toxin LVJ78_09360 PF07995 Glucose / Sorbosone dehydrogenase LVJ78_09370 PF01425 Amidase LVJ78_09375 PF02686 Glu-tRNAGln amidotransferase C subunit LVJ78_09385 PF04085 rod shape-determining protein MreC LVJ78_09395 PF00905 Penicillin binding protein transpeptidase domain LVJ78_09395 PF03717 Penicillin-binding Protein dimerisation domain LVJ78_09400 PF01098 Cell cycle protein LVJ78_09405 PF01914 MarC family integral membrane protein LVJ78_09410 PF05175 Methyltransferase small domain LVJ78_09415 PF16658 Class II release factor RF3, C-terminal domain LVJ78_09415 PF03144 Elongation factor Tu domain 2 LVJ78_09415 PF00009 Elongation factor Tu GTP binding domain LVJ78_09425 PF00850 Histone deacetylase domain LVJ78_09430 PF02699 Preprotein translocase subunit LVJ78_09435 PF02355 Protein export membrane protein LVJ78_09435 PF13721 SecD export protein N-terminal TM region LVJ78_09435 PF07549 SecD/SecF GG Motif LVJ78_09440 PF02355 Protein export membrane protein LVJ78_09440 PF07549 SecD/SecF GG Motif LVJ78_09445 PF17676 LD-carboxypeptidase C-terminal domain LVJ78_09445 PF02016 LD-carboxypeptidase N-terminal domain LVJ78_09455 PF00075 RNase H LVJ78_09460 PF00549 CoA-ligase LVJ78_09460 PF02629 CoA binding domain LVJ78_09465 PF08442 ATP-grasp domain LVJ78_09465 PF00549 CoA-ligase LVJ78_09480 PF07992 Pyridine nucleotide-disulphide oxidoreductase LVJ78_09480 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LVJ78_09490 PF02817 e3 binding domain LVJ78_09490 PF00364 Biotin-requiring enzyme LVJ78_09490 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LVJ78_09495 PF02779 Transketolase, pyrimidine binding domain LVJ78_09495 PF16870 2-oxoglutarate dehydrogenase C-terminal LVJ78_09495 PF00676 Dehydrogenase E1 component LVJ78_09495 PF16078 2-oxoglutarate dehydrogenase N-terminus LVJ78_09500 PF00285 Citrate synthase, C-terminal domain LVJ78_09505 PF03937 Flavinator of succinate dehydrogenase LVJ78_09510 PF13085 2Fe-2S iron-sulfur cluster binding domain LVJ78_09515 PF02910 Fumarate reductase flavoprotein C-term LVJ78_09515 PF00890 FAD binding domain LVJ78_09525 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LVJ78_09530 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LVJ78_09530 PF00056 lactate/malate dehydrogenase, NAD binding domain LVJ78_09550 PF00291 Pyridoxal-phosphate dependent enzyme LVJ78_09565 PF01678 Diaminopimelate epimerase LVJ78_09580 PF00301 Rubredoxin LVJ78_09595 PF01264 Chorismate synthase LVJ78_09605 PF00156 Phosphoribosyl transferase domain LVJ78_09610 PF00625 Guanylate kinase LVJ78_09615 PF01192 RNA polymerase Rpb6 LVJ78_09620 PF04607 Region found in RelA / SpoT proteins LVJ78_09620 PF13291 ACT domain LVJ78_09620 PF02824 TGS domain LVJ78_09625 PF01165 Ribosomal protein S21 LVJ78_09640 PF09424 Yqey-like protein LVJ78_09645 PF10410 DnaB-helicase binding domain of primase LVJ78_09645 PF08275 DNA primase catalytic core, N-terminal domain LVJ78_09645 PF01807 CHC2 zinc finger LVJ78_09645 PF08278 DNA primase DnaG DnaB-binding LVJ78_09650 PF03979 Sigma-70 factor, region 1.1 LVJ78_09650 PF00140 Sigma-70 factor, region 1.2 LVJ78_09650 PF04542 Sigma-70 region 2 LVJ78_09650 PF04539 Sigma-70 region 3 LVJ78_09650 PF04545 Sigma-70, region 4 LVJ78_09650 PF04546 Sigma-70, non-essential region LVJ78_09660 PF00209 Sodium:neurotransmitter symporter family LVJ78_09670 PF07085 DRTGG domain LVJ78_09670 PF01515 Phosphate acetyl/butaryl transferase LVJ78_09675 PF08019 Phosphoethanolamine transferase EptA/EptB LVJ78_09675 PF00884 Sulfatase LVJ78_09680 PF00072 Response regulator receiver domain LVJ78_09680 PF00486 Transcriptional regulatory protein, C terminal LVJ78_09685 PF08521 Two-component sensor kinase N-terminal LVJ78_09685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LVJ78_09685 PF00512 His Kinase A (phospho-acceptor) domain LVJ78_09695 PF01323 DSBA-like thioredoxin domain LVJ78_09700 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LVJ78_09710 PF13335 Magnesium chelatase, subunit ChlI C-terminal LVJ78_09710 PF01078 Magnesium chelatase, subunit ChlI LVJ78_09725 PF00293 NUDIX domain LVJ78_09730 PF01648 4'-phosphopantetheinyl transferase superfamily LVJ78_09735 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ LVJ78_09740 PF02565 Recombination protein O C terminal LVJ78_09740 PF11967 Recombination protein O N terminal LVJ78_09745 PF02321 Outer membrane efflux protein LVJ78_09750 PF02687 FtsX-like permease family LVJ78_09750 PF12704 MacB-like periplasmic core domain LVJ78_09750 PF00005 ABC transporter LVJ78_09755 PF13533 Biotin-lipoyl like LVJ78_09775 PF07724 AAA domain (Cdc48 subfamily) LVJ78_09775 PF10431 C-terminal, D2-small domain, of ClpB protein LVJ78_09775 PF06689 ClpX C4-type zinc finger LVJ78_09780 PF00768 D-alanyl-D-alanine carboxypeptidase LVJ78_09785 PF01208 Uroporphyrinogen decarboxylase (URO-D) LVJ78_09790 PF00672 HAMP domain LVJ78_09790 PF00512 His Kinase A (phospho-acceptor) domain LVJ78_09790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LVJ78_09790 PF16750 Sensor domain of 2-component histidine kinase LVJ78_09795 PF00072 Response regulator receiver domain LVJ78_09795 PF00486 Transcriptional regulatory protein, C terminal LVJ78_09810 PF00902 Sec-independent protein translocase protein (TatC) LVJ78_09815 PF02416 mttA/Hcf106 family LVJ78_09820 PF02416 mttA/Hcf106 family LVJ78_09830 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase LVJ78_09840 PF01502 Phosphoribosyl-AMP cyclohydrolase LVJ78_09845 PF01425 Amidase LVJ78_09860 PF00977 Histidine biosynthesis protein LVJ78_09870 PF00977 Histidine biosynthesis protein LVJ78_09875 PF00117 Glutamine amidotransferase class-I LVJ78_09890 PF00005 ABC transporter LVJ78_09895 PF00528 Binding-protein-dependent transport system inner membrane component LVJ78_09900 PF00528 Binding-protein-dependent transport system inner membrane component LVJ78_09905 PF00497 Bacterial extracellular solute-binding proteins, family 3 LVJ78_09915 PF00475 Imidazoleglycerol-phosphate dehydratase LVJ78_09920 PF00155 Aminotransferase class I and II LVJ78_09925 PF04055 Radical SAM superfamily LVJ78_09930 PF01242 6-pyruvoyl tetrahydropterin synthase LVJ78_09940 PF06508 Queuosine biosynthesis protein QueC LVJ78_09945 PF00814 Glycoprotease family LVJ78_09960 PF01464 Transglycosylase SLT domain LVJ78_09960 PF14718 Soluble lytic murein transglycosylase L domain LVJ78_09965 PF02386 Cation transport protein LVJ78_09970 PF00005 ABC transporter LVJ78_09975 PF00528 Binding-protein-dependent transport system inner membrane component LVJ78_09980 PF00528 Binding-protein-dependent transport system inner membrane component LVJ78_09985 PF12849 PBP superfamily domain LVJ78_09990 PF01895 PhoU domain LVJ78_09995 PF02080 TrkA-C domain LVJ78_09995 PF02254 TrkA-N domain LVJ78_10005 PF13419 Haloacid dehalogenase-like hydrolase LVJ78_10010 PF03633 Glycosyl hydrolase family 65, C-terminal domain LVJ78_10010 PF03636 Glycosyl hydrolase family 65, N-terminal domain LVJ78_10010 PF03632 Glycosyl hydrolase family 65 central catalytic domain LVJ78_10015 PF01263 Aldose 1-epimerase LVJ78_10030 PF05681 Fumarate hydratase (Fumerase) LVJ78_10030 PF05683 Fumarase C-terminus LVJ78_10040 PF01435 Peptidase family M48 LVJ78_10045 PF00109 Beta-ketoacyl synthase, N-terminal domain LVJ78_10045 PF02801 Beta-ketoacyl synthase, C-terminal domain LVJ78_10050 PF00550 Phosphopantetheine attachment site LVJ78_10055 PF00326 Prolyl oligopeptidase family LVJ78_10055 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain LVJ78_10060 PF00156 Phosphoribosyl transferase domain LVJ78_10070 PF00381 PTS HPr component phosphorylation site LVJ78_10075 PF05524 PEP-utilising enzyme, N-terminal LVJ78_10075 PF00391 PEP-utilising enzyme, mobile domain LVJ78_10075 PF02896 PEP-utilising enzyme, TIM barrel domain LVJ78_10085 PF08264 Anticodon-binding domain of tRNA LVJ78_10085 PF00133 tRNA synthetases class I (I, L, M and V) LVJ78_10085 PF13603 Leucyl-tRNA synthetase, Domain 2 LVJ78_10085 PF09334 tRNA synthetases class I (M) LVJ78_10090 PF02503 Polyphosphate kinase middle domain LVJ78_10090 PF13090 Polyphosphate kinase C-terminal domain 2 LVJ78_10090 PF17941 Polyphosphate kinase C-terminal domain 1 LVJ78_10090 PF13089 Polyphosphate kinase N-terminal domain LVJ78_10095 PF03109 ABC1 family LVJ78_10100 PF00877 NlpC/P60 family LVJ78_10110 PF03788 LrgA family LVJ78_10115 PF04172 LrgB-like family LVJ78_10130 PF13580 SIS domain LVJ78_10135 PF02021 Uncharacterised protein family UPF0102 LVJ78_10140 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LVJ78_10150 PF00106 short chain dehydrogenase LVJ78_10155 PF03466 LysR substrate binding domain LVJ78_10155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LVJ78_10160 PF07681 DoxX LVJ78_10170 PF07690 Major Facilitator Superfamily LVJ78_10175 PF02472 Biopolymer transport protein ExbD/TolR LVJ78_10180 PF01618 MotA/TolQ/ExbB proton channel family LVJ78_10185 PF03544 Gram-negative bacterial TonB protein C-terminal LVJ78_10190 PF01553 Acyltransferase LVJ78_10200 PF06039 Malate:quinone oxidoreductase (Mqo) LVJ78_10205 PF13673 Acetyltransferase (GNAT) domain LVJ78_10205 PF13302 Acetyltransferase (GNAT) domain LVJ78_10205 PF03352 Methyladenine glycosylase LVJ78_10205 PF00117 Glutamine amidotransferase class-I LVJ78_10205 PF00958 GMP synthase C terminal domain LVJ78_10230 PF00171 Aldehyde dehydrogenase family LVJ78_10235 PF00202 Aminotransferase class-III LVJ78_10240 PF02627 Carboxymuconolactone decarboxylase family LVJ78_10245 PF04303 PrpF protein LVJ78_10250 PF00871 Acetokinase family LVJ78_10255 PF00871 Acetokinase family LVJ78_10260 PF00579 tRNA synthetases class I (W and Y) LVJ78_10270 PF01757 Acyltransferase family LVJ78_10280 PF06071 Protein of unknown function (DUF933) LVJ78_10280 PF01926 50S ribosome-binding GTPase LVJ78_10290 PF03109 ABC1 family LVJ78_10295 PF02219 Methylenetetrahydrofolate reductase LVJ78_10300 PF02562 PhoH-like protein LVJ78_10320 PF02130 Uncharacterized protein family UPF0054 LVJ78_10325 PF00571 CBS domain LVJ78_10325 PF03471 Transporter associated domain LVJ78_10335 PF05573 NosL LVJ78_10340 PF12679 ABC-2 family transporter protein LVJ78_10345 PF00005 ABC transporter LVJ78_10355 PF18793 Nitrous oxide reductase propeller repeat 2 LVJ78_10355 PF13473 Cupredoxin-like domain LVJ78_10355 PF18764 Nitrous oxide reductase propeller repeat LVJ78_10360 PF04205 FMN-binding domain LVJ78_10360 PF12801 4Fe-4S binding domain LVJ78_10365 PF00291 Pyridoxal-phosphate dependent enzyme LVJ78_10370 PF05175 Methyltransferase small domain LVJ78_10370 PF08468 Methyltransferase small domain N-terminal LVJ78_10375 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LVJ78_10375 PF07992 Pyridine nucleotide-disulphide oxidoreductase LVJ78_10385 PF03755 YicC-like family, N-terminal region LVJ78_10385 PF08340 Domain of unknown function (DUF1732) LVJ78_10390 PF01138 3' exoribonuclease family, domain 1 LVJ78_10390 PF03725 3' exoribonuclease family, domain 2 LVJ78_10395 PF13840 ACT domain LVJ78_10395 PF01842 ACT domain LVJ78_10395 PF00696 Amino acid kinase family LVJ78_10400 PF07690 Major Facilitator Superfamily LVJ78_10405 PF13419 Haloacid dehalogenase-like hydrolase LVJ78_10410 PF02631 RecX family LVJ78_10420 PF00285 Citrate synthase, C-terminal domain LVJ78_10425 PF00330 Aconitase family (aconitate hydratase) LVJ78_10425 PF00694 Aconitase C-terminal domain LVJ78_10440 PF12034 Domain of unknown function (DUF3520) LVJ78_10440 PF00092 von Willebrand factor type A domain LVJ78_10440 PF12450 von Willebrand factor LVJ78_10470 PF00145 C-5 cytosine-specific DNA methylase LVJ78_10475 PF17674 HHH domain LVJ78_10475 PF00575 S1 RNA binding domain LVJ78_10475 PF09371 Tex-like protein N-terminal domain LVJ78_10475 PF16921 Tex protein YqgF-like domain LVJ78_10485 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LVJ78_10485 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LVJ78_10485 PF12806 Acetyl-CoA dehydrogenase C-terminal like LVJ78_10485 PF02770 Acyl-CoA dehydrogenase, middle domain LVJ78_10490 PF00593 TonB dependent receptor LVJ78_10490 PF07715 TonB-dependent Receptor Plug Domain LVJ78_10495 PF07995 Glucose / Sorbosone dehydrogenase LVJ78_10510 PF00463 Isocitrate lyase family LVJ78_10515 PF00005 ABC transporter LVJ78_10570 PF05958 tRNA (Uracil-5-)-methyltransferase LVJ78_10575 PF01476 LysM domain LVJ78_10575 PF03734 L,D-transpeptidase catalytic domain LVJ78_10580 PF02547 Queuosine biosynthesis protein LVJ78_10585 PF00364 Biotin-requiring enzyme LVJ78_10590 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LVJ78_10590 PF00289 Biotin carboxylase, N-terminal domain LVJ78_10590 PF02785 Biotin carboxylase C-terminal domain LVJ78_10600 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein LVJ78_10605 PF04963 Sigma-54 factor, core binding domain LVJ78_10605 PF04552 Sigma-54, DNA binding domain LVJ78_10605 PF00309 Sigma-54 factor, Activator interacting domain (AID) LVJ78_10610 PF00005 ABC transporter LVJ78_10615 PF03968 OstA-like protein LVJ78_10630 PF01380 SIS domain LVJ78_10630 PF00571 CBS domain LVJ78_10635 PF00923 Transaldolase/Fructose-6-phosphate aldolase LVJ78_10640 PF00578 AhpC/TSA family LVJ78_10650 PF00380 Ribosomal protein S9/S16 LVJ78_10655 PF00572 Ribosomal protein L13 LVJ78_10665 PF05164 Cell division protein ZapA LVJ78_10675 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus LVJ78_10675 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus LVJ78_10680 PF00034 Cytochrome c LVJ78_10680 PF14376 Haem-binding domain LVJ78_10680 PF03150 Di-haem cytochrome c peroxidase LVJ78_10685 PF07690 Major Facilitator Superfamily LVJ78_10695 PF00330 Aconitase family (aconitate hydratase) LVJ78_10695 PF06434 Aconitate hydratase 2 N-terminus LVJ78_10695 PF11791 Aconitate B N-terminal domain LVJ78_10705 PF13358 DDE superfamily endonuclease LVJ78_10715 PF02447 GntP family permease LVJ78_10725 PF02773 S-adenosylmethionine synthetase, C-terminal domain LVJ78_10725 PF02772 S-adenosylmethionine synthetase, central domain LVJ78_10725 PF00438 S-adenosylmethionine synthetase, N-terminal domain LVJ78_10730 PF02810 SEC-C motif LVJ78_10735 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal LVJ78_10735 PF14602 Hexapeptide repeat of succinyl-transferase LVJ78_10740 PF03588 Leucyl/phenylalanyl-tRNA protein transferase LVJ78_10745 PF01475 Ferric uptake regulator family LVJ78_10750 PF04355 SmpA / OmlA family LVJ78_10755 PF05173 Dihydrodipicolinate reductase, C-terminus LVJ78_10755 PF01113 Dihydrodipicolinate reductase, N-terminus LVJ78_10760 PF00912 Transglycosylase LVJ78_10765 PF18317 Shikimate 5'-dehydrogenase C-terminal domain LVJ78_10765 PF08501 Shikimate dehydrogenase substrate binding domain LVJ78_10765 PF01488 Shikimate / quinate 5-dehydrogenase LVJ78_10770 PF03951 Glutamine synthetase, beta-Grasp domain LVJ78_10770 PF00120 Glutamine synthetase, catalytic domain LVJ78_10775 PF03616 Sodium/glutamate symporter LVJ78_10785 PF04060 Putative Fe-S cluster LVJ78_10795 PF04055 Radical SAM superfamily LVJ78_10795 PF06968 Biotin and Thiamin Synthesis associated domain LVJ78_10810 PF03372 Endonuclease/Exonuclease/phosphatase family LVJ78_10815 PF00156 Phosphoribosyl transferase domain LVJ78_10825 PF00583 Acetyltransferase (GNAT) family LVJ78_10825 PF00696 Amino acid kinase family LVJ78_10830 PF04362 Bacterial Fe(2+) trafficking LVJ78_10835 PF01040 UbiA prenyltransferase family LVJ78_10840 PF01027 Inhibitor of apoptosis-promoting Bax1 LVJ78_10845 PF01467 Cytidylyltransferase-like LVJ78_10850 PF00749 tRNA synthetases class I (E and Q), catalytic domain LVJ78_10855 PF00814 Glycoprotease family LVJ78_10860 PF00583 Acetyltransferase (GNAT) family LVJ78_10870 PF04386 Stringent starvation protein B LVJ78_10875 PF00043 Glutathione S-transferase, C-terminal domain LVJ78_10875 PF02798 Glutathione S-transferase, N-terminal domain LVJ78_10880 PF02167 Cytochrome C1 family LVJ78_10885 PF00033 Cytochrome b/b6/petB LVJ78_10885 PF00032 Cytochrome b(C-terminal)/b6/petD LVJ78_10890 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal LVJ78_10890 PF00355 Rieske [2Fe-2S] domain LVJ78_10895 PF01784 NIF3 (NGG1p interacting factor 3) LVJ78_10905 PF00118 TCP-1/cpn60 chaperonin family LVJ78_10910 PF00166 Chaperonin 10 Kd subunit LVJ78_10925 PF01970 Tripartite tricarboxylate transporter TctA family LVJ78_10930 PF05145 Transition state regulatory protein AbrB LVJ78_10940 PF00593 TonB dependent receptor LVJ78_10940 PF07715 TonB-dependent Receptor Plug Domain LVJ78_10950 PF00756 Putative esterase LVJ78_10955 PF04954 Siderophore-interacting protein LVJ78_10955 PF08021 Siderophore-interacting FAD-binding domain LVJ78_10960 PF01497 Periplasmic binding protein LVJ78_10965 PF01032 FecCD transport family LVJ78_10970 PF01032 FecCD transport family LVJ78_10975 PF00005 ABC transporter LVJ78_10980 PF00311 Phosphoenolpyruvate carboxylase LVJ78_10995 PF01451 Low molecular weight phosphotyrosine protein phosphatase LVJ78_11005 PF01235 Sodium:alanine symporter family LVJ78_11010 PF01709 Transcriptional regulator LVJ78_11025 PF00885 6,7-dimethyl-8-ribityllumazine synthase LVJ78_11030 PF01029 NusB family LVJ78_11050 PF02261 Aspartate decarboxylase LVJ78_11055 PF03091 CutA1 divalent ion tolerance protein LVJ78_11065 PF00308 Bacterial dnaA protein LVJ78_11070 PF09335 SNARE associated Golgi protein LVJ78_11075 PF01557 Fumarylacetoacetate (FAA) hydrolase family LVJ78_11080 PF03129 Anticodon binding domain LVJ78_11080 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LVJ78_11080 PF04073 Aminoacyl-tRNA editing domain LVJ78_11085 PF00484 Carbonic anhydrase LVJ78_11090 PF00005 ABC transporter LVJ78_11090 PF12848 ABC transporter LVJ78_11095 PF00465 Iron-containing alcohol dehydrogenase LVJ78_11110 PF01225 Mur ligase family, catalytic domain LVJ78_11110 PF02875 Mur ligase family, glutamate ligase domain LVJ78_11110 PF08245 Mur ligase middle domain LVJ78_11145 PF02881 SRP54-type protein, helical bundle domain LVJ78_11145 PF02978 Signal peptide binding domain LVJ78_11145 PF00448 SRP54-type protein, GTPase domain LVJ78_11150 PF03009 Glycerophosphoryl diester phosphodiesterase family LVJ78_11155 PF00162 Phosphoglycerate kinase LVJ78_11170 PF00578 AhpC/TSA family LVJ78_11175 PF03960 ArsC family LVJ78_11185 PF03653 Uncharacterised protein family (UPF0093) LVJ78_11190 PF01928 CYTH domain LVJ78_11200 PF00202 Aminotransferase class-III LVJ78_11205 PF01116 Fructose-bisphosphate aldolase class-II LVJ78_11210 PF00860 Permease family LVJ78_11215 PF00919 Uncharacterized protein family UPF0004 LVJ78_11215 PF04055 Radical SAM superfamily LVJ78_11215 PF01938 TRAM domain LVJ78_11225 PF01196 Ribosomal protein L17 LVJ78_11230 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain LVJ78_11230 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain LVJ78_11230 PF01000 RNA polymerase Rpb3/RpoA insert domain LVJ78_11235 PF00163 Ribosomal protein S4/S9 N-terminal domain LVJ78_11235 PF01479 S4 domain LVJ78_11240 PF00411 Ribosomal protein S11 LVJ78_11245 PF00416 Ribosomal protein S13/S18 LVJ78_11250 PF00444 Ribosomal protein L36 LVJ78_11255 PF01176 Translation initiation factor 1A / IF-1 LVJ78_11260 PF00344 SecY translocase LVJ78_11265 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A LVJ78_11270 PF00327 Ribosomal protein L30p/L7e LVJ78_11275 PF00333 Ribosomal protein S5, N-terminal domain LVJ78_11275 PF03719 Ribosomal protein S5, C-terminal domain LVJ78_11280 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast LVJ78_11285 PF00347 Ribosomal protein L6 LVJ78_11290 PF00410 Ribosomal protein S8 LVJ78_11295 PF00253 Ribosomal protein S14p/S29e LVJ78_11300 PF00281 Ribosomal protein L5 LVJ78_11300 PF00673 ribosomal L5P family C-terminus LVJ78_11305 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 LVJ78_11305 PF00467 KOW motif LVJ78_11310 PF00238 Ribosomal protein L14p/L23e LVJ78_11315 PF00366 Ribosomal protein S17 LVJ78_11320 PF00831 Ribosomal L29 protein LVJ78_11325 PF00252 Ribosomal protein L16p/L10e LVJ78_11330 PF00189 Ribosomal protein S3, C-terminal domain LVJ78_11330 PF07650 KH domain LVJ78_11335 PF00237 Ribosomal protein L22p/L17e LVJ78_11340 PF00203 Ribosomal protein S19 LVJ78_11345 PF03947 Ribosomal Proteins L2, C-terminal domain LVJ78_11345 PF00181 Ribosomal Proteins L2, RNA binding domain LVJ78_11350 PF00276 Ribosomal protein L23 LVJ78_11355 PF00573 Ribosomal protein L4/L1 family LVJ78_11360 PF00297 Ribosomal protein L3 LVJ78_11365 PF14743 DNA ligase OB-like domain LVJ78_11365 PF01068 ATP dependent DNA ligase domain LVJ78_11370 PF00338 Ribosomal protein S10p/S20e LVJ78_11375 PF00009 Elongation factor Tu GTP binding domain LVJ78_11375 PF03143 Elongation factor Tu C-terminal domain LVJ78_11375 PF03144 Elongation factor Tu domain 2 LVJ78_11380 PF00679 Elongation factor G C-terminus LVJ78_11380 PF14492 Elongation Factor G, domain II LVJ78_11380 PF03764 Elongation factor G, domain IV LVJ78_11380 PF03144 Elongation factor Tu domain 2 LVJ78_11380 PF00009 Elongation factor Tu GTP binding domain LVJ78_11385 PF00177 Ribosomal protein S7p/S5e LVJ78_11390 PF00164 Ribosomal protein S12/S23 LVJ78_11395 PF04997 RNA polymerase Rpb1, domain 1 LVJ78_11395 PF04998 RNA polymerase Rpb1, domain 5 LVJ78_11395 PF05000 RNA polymerase Rpb1, domain 4 LVJ78_11395 PF04983 RNA polymerase Rpb1, domain 3 LVJ78_11395 PF00623 RNA polymerase Rpb1, domain 2 LVJ78_11400 PF10385 RNA polymerase beta subunit external 1 domain LVJ78_11400 PF04565 RNA polymerase Rpb2, domain 3 LVJ78_11400 PF04563 RNA polymerase beta subunit LVJ78_11400 PF00562 RNA polymerase Rpb2, domain 6 LVJ78_11400 PF04561 RNA polymerase Rpb2, domain 2 LVJ78_11400 PF04560 RNA polymerase Rpb2, domain 7 LVJ78_11405 PF00542 Ribosomal protein L7/L12 C-terminal domain LVJ78_11405 PF16320 Ribosomal protein L7/L12 dimerisation domain LVJ78_11410 PF00466 Ribosomal protein L10 LVJ78_11415 PF00687 Ribosomal protein L1p/L10e family LVJ78_11420 PF00298 Ribosomal protein L11, RNA binding domain LVJ78_11420 PF03946 Ribosomal protein L11, N-terminal domain LVJ78_11425 PF00467 KOW motif LVJ78_11425 PF02357 Transcription termination factor nusG LVJ78_11430 PF00584 SecE/Sec61-gamma subunits of protein translocation complex LVJ78_11440 PF03144 Elongation factor Tu domain 2 LVJ78_11440 PF03143 Elongation factor Tu C-terminal domain LVJ78_11440 PF00009 Elongation factor Tu GTP binding domain LVJ78_11460 PF00037 4Fe-4S binding domain LVJ78_11470 PF13368 Topoisomerase C-terminal repeat LVJ78_11470 PF01751 Toprim domain LVJ78_11470 PF01131 DNA topoisomerase LVJ78_11475 PF04361 Protein of unknown function (DUF494) LVJ78_11480 PF17782 DprA winged helix domain LVJ78_11480 PF02481 DNA recombination-mediator protein A LVJ78_11490 PF01327 Polypeptide deformylase LVJ78_11495 PF02911 Formyl transferase, C-terminal domain LVJ78_11495 PF00551 Formyl transferase LVJ78_11500 PF01029 NusB family LVJ78_11500 PF01189 16S rRNA methyltransferase RsmB/F LVJ78_11510 PF00512 His Kinase A (phospho-acceptor) domain LVJ78_11510 PF00672 HAMP domain LVJ78_11510 PF00989 PAS fold LVJ78_11510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LVJ78_11515 PF00158 Sigma-54 interaction domain LVJ78_11515 PF00072 Response regulator receiver domain LVJ78_11515 PF02954 Bacterial regulatory protein, Fis family LVJ78_11520 PF01964 Radical SAM ThiC family LVJ78_11520 PF13667 ThiC-associated domain LVJ78_11525 PF05175 Methyltransferase small domain LVJ78_11525 PF17827 PrmC N-terminal domain LVJ78_11530 PF00571 CBS domain LVJ78_11530 PF01769 Divalent cation transporter LVJ78_11530 PF03448 MgtE intracellular N domain LVJ78_11535 PF02556 Preprotein translocase subunit SecB LVJ78_11540 PF00462 Glutaredoxin LVJ78_11545 PF00300 Histidine phosphatase superfamily (branch 1) LVJ78_11550 PF03895 YadA-like membrane anchor domain LVJ78_11550 PF05658 Head domain of trimeric autotransporter adhesin LVJ78_11550 PF05662 Coiled stalk of trimeric autotransporter adhesin LVJ78_11565 PF01018 GTP1/OBG LVJ78_11565 PF01926 50S ribosome-binding GTPase LVJ78_11575 PF09190 DALR domain LVJ78_11575 PF01406 tRNA synthetases class I (C) catalytic domain LVJ78_11580 PF01197 Ribosomal protein L31 LVJ78_11585 PF17764 3′ DNA-binding domain (3′BD) LVJ78_11585 PF00271 Helicase conserved C-terminal domain LVJ78_11585 PF00270 DEAD/DEAH box helicase LVJ78_11585 PF18319 PriA DNA helicase Cys-rich region (CRR) domain LVJ78_11585 PF18074 Primosomal protein N C-terminal domain LVJ78_11590 PF03222 Tryptophan/tyrosine permease family LVJ78_11595 PF03928 Haem-degrading LVJ78_11600 PF00529 HlyD membrane-fusion protein of T1SS LVJ78_11600 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LVJ78_11610 PF02774 Semialdehyde dehydrogenase, dimerisation domain LVJ78_11610 PF01118 Semialdehyde dehydrogenase, NAD binding domain LVJ78_11635 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LVJ78_11635 PF00437 Type II/IV secretion system protein LVJ78_11640 PF00482 Type II secretion system (T2SS), protein F LVJ78_11645 PF06750 Bacterial Peptidase A24 N-terminal domain LVJ78_11645 PF01478 Type IV leader peptidase family LVJ78_11650 PF01121 Dephospho-CoA kinase LVJ78_11655 PF07072 Cell division protein LVJ78_11660 PF03884 DNA gyrase inhibitor YacG LVJ78_11670 PF12327 FtsZ family, C-terminal domain LVJ78_11670 PF00091 Tubulin/FtsZ family, GTPase domain LVJ78_11675 PF02491 SHS2 domain inserted in FTSA LVJ78_11680 PF03799 Cell division protein FtsQ LVJ78_11680 PF08478 POTRA domain, FtsQ-type LVJ78_11685 PF01820 D-ala D-ala ligase N-terminus LVJ78_11685 PF07478 D-ala D-ala ligase C-terminus LVJ78_11690 PF01225 Mur ligase family, catalytic domain LVJ78_11690 PF08245 Mur ligase middle domain LVJ78_11690 PF02875 Mur ligase family, glutamate ligase domain LVJ78_11695 PF03033 Glycosyltransferase family 28 N-terminal domain LVJ78_11695 PF04101 Glycosyltransferase family 28 C-terminal domain LVJ78_11700 PF01098 Cell cycle protein LVJ78_11705 PF08245 Mur ligase middle domain LVJ78_11705 PF02875 Mur ligase family, glutamate ligase domain LVJ78_11715 PF00953 Glycosyl transferase family 4 LVJ78_11720 PF08245 Mur ligase middle domain LVJ78_11720 PF01225 Mur ligase family, catalytic domain LVJ78_11720 PF02875 Mur ligase family, glutamate ligase domain LVJ78_11725 PF01225 Mur ligase family, catalytic domain LVJ78_11725 PF08245 Mur ligase middle domain LVJ78_11725 PF02875 Mur ligase family, glutamate ligase domain LVJ78_11730 PF03717 Penicillin-binding Protein dimerisation domain LVJ78_11730 PF00905 Penicillin binding protein transpeptidase domain LVJ78_11735 PF04999 Cell division protein FtsL LVJ78_11740 PF01795 MraW methylase family LVJ78_11745 PF02381 MraZ protein, putative antitoxin-like LVJ78_11765 PF00005 ABC transporter LVJ78_11770 PF01061 ABC-2 type transporter LVJ78_11780 PF02563 Polysaccharide biosynthesis/export protein LVJ78_11795 PF00535 Glycosyl transferase family 2 LVJ78_11805 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LVJ78_11805 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LVJ78_11805 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LVJ78_11810 PF00535 Glycosyl transferase family 2 LVJ78_11815 PF00793 DAHP synthetase I family LVJ78_11820 PF16363 GDP-mannose 4,6 dehydratase LVJ78_11825 PF05159 Capsule polysaccharide biosynthesis protein LVJ78_11830 PF05159 Capsule polysaccharide biosynthesis protein LVJ78_11840 PF00684 DnaJ central domain LVJ78_11840 PF00226 DnaJ domain LVJ78_11840 PF01556 DnaJ C terminal domain LVJ78_11845 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase LVJ78_11850 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LVJ78_11850 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LVJ78_11855 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain LVJ78_11855 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain LVJ78_11885 PF02527 rRNA small subunit methyltransferase G LVJ78_11890 PF13614 AAA domain LVJ78_11905 PF01389 OmpA-like transmembrane domain LVJ78_11905 PF00691 OmpA family LVJ78_11915 PF03895 YadA-like membrane anchor domain LVJ78_11915 PF05658 Head domain of trimeric autotransporter adhesin LVJ78_11915 PF05662 Coiled stalk of trimeric autotransporter adhesin LVJ78_11915 PF13018 Extended Signal Peptide of Type V secretion system LVJ78_11915 PF05658 Head domain of trimeric autotransporter adhesin LVJ78_11915 PF05662 Coiled stalk of trimeric autotransporter adhesin LVJ78_11915 PF13018 Extended Signal Peptide of Type V secretion system LVJ78_11915 PF03895 YadA-like membrane anchor domain LVJ78_11920 PF00324 Amino acid permease LVJ78_11925 PF01551 Peptidase family M23 LVJ78_11925 PF08525 Opacity-associated protein A N-terminal motif LVJ78_11925 PF01476 LysM domain LVJ78_11940 PF02887 Pyruvate kinase, alpha/beta domain LVJ78_11940 PF00224 Pyruvate kinase, barrel domain LVJ78_11945 PF00132 Bacterial transferase hexapeptide (six repeats) LVJ78_11950 PF07687 Peptidase dimerisation domain LVJ78_11950 PF01546 Peptidase family M20/M25/M40 LVJ78_11955 PF05690 Thiazole biosynthesis protein ThiG LVJ78_11970 PF01266 FAD dependent oxidoreductase LVJ78_11985 PF00875 DNA photolyase LVJ78_11985 PF03441 FAD binding domain of DNA photolyase LVJ78_12005 PF05209 Septum formation inhibitor MinC, N-terminal domain LVJ78_12005 PF03775 Septum formation inhibitor MinC, C-terminal domain LVJ78_12010 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LVJ78_12015 PF03776 Septum formation topological specificity factor MinE LVJ78_12020 PF03466 LysR substrate binding domain LVJ78_12020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LVJ78_12025 PF03741 Integral membrane protein TerC family LVJ78_12050 PF13358 DDE superfamily endonuclease LVJ78_12055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LVJ78_12055 PF00989 PAS fold LVJ78_12055 PF11808 Phosphate regulon sensor protein PhoR LVJ78_12055 PF00512 His Kinase A (phospho-acceptor) domain LVJ78_12060 PF00072 Response regulator receiver domain LVJ78_12060 PF00486 Transcriptional regulatory protein, C terminal LVJ78_12065 PF00696 Amino acid kinase family LVJ78_12065 PF01472 PUA domain LVJ78_12075 PF00361 Proton-conducting membrane transporter LVJ78_12080 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus LVJ78_12080 PF00361 Proton-conducting membrane transporter LVJ78_12095 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LVJ78_12095 PF00361 Proton-conducting membrane transporter LVJ78_12100 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LVJ78_12105 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 LVJ78_12110 PF12838 4Fe-4S dicluster domain LVJ78_12115 PF00146 NADH dehydrogenase LVJ78_12120 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region LVJ78_12120 PF00384 Molybdopterin oxidoreductase LVJ78_12120 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal LVJ78_12130 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region LVJ78_12130 PF10531 SLBB domain LVJ78_12130 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit LVJ78_12140 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit LVJ78_12145 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit LVJ78_12155 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LVJ78_12160 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 LVJ78_12170 PF03594 Benzoate membrane transport protein LVJ78_12180 PF13411 MerR HTH family regulatory protein LVJ78_12185 PF00403 Heavy-metal-associated domain LVJ78_12195 PF13195 Protein of unknown function (DUF4011) LVJ78_12195 PF13086 AAA domain LVJ78_12195 PF13087 AAA domain LVJ78_12200 PF00270 DEAD/DEAH box helicase LVJ78_12200 PF11898 Domain of unknown function (DUF3418) LVJ78_12200 PF04408 Helicase associated domain (HA2) LVJ78_12200 PF00271 Helicase conserved C-terminal domain LVJ78_12200 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold LVJ78_12215 PF04397 LytTr DNA-binding domain LVJ78_12215 PF00072 Response regulator receiver domain LVJ78_12250 PF01258 Prokaryotic dksA/traR C4-type zinc finger LVJ78_12260 PF14748 Pyrroline-5-carboxylate reductase dimerisation LVJ78_12260 PF03807 NADP oxidoreductase coenzyme F420-dependent LVJ78_12265 PF01168 Alanine racemase, N-terminal domain LVJ78_12270 PF00437 Type II/IV secretion system protein LVJ78_12275 PF00437 Type II/IV secretion system protein LVJ78_12280 PF00892 EamA-like transporter family LVJ78_12285 PF03167 Uracil DNA glycosylase superfamily LVJ78_12290 PF06733 DEAD_2 LVJ78_12290 PF13307 Helicase C-terminal domain LVJ78_12295 PF01380 SIS domain LVJ78_12300 PF00132 Bacterial transferase hexapeptide (six repeats) LVJ78_12300 PF12804 MobA-like NTP transferase domain LVJ78_12325 PF00005 ABC transporter LVJ78_12330 PF01061 ABC-2 type transporter LVJ78_12335 PF12805 FUSC-like inner membrane protein yccS LVJ78_12340 PF00749 tRNA synthetases class I (E and Q), catalytic domain LVJ78_12345 PF00849 RNA pseudouridylate synthase LVJ78_12350 PF16491 CAAX prenyl protease N-terminal, five membrane helices LVJ78_12350 PF01435 Peptidase family M48 LVJ78_12355 PF03193 RsgA GTPase LVJ78_12360 PF01300 Telomere recombination LVJ78_12380 PF00842 Alanine racemase, C-terminal domain LVJ78_12380 PF01168 Alanine racemase, N-terminal domain LVJ78_12385 PF00005 ABC transporter LVJ78_12385 PF08402 TOBE domain LVJ78_12390 PF00528 Binding-protein-dependent transport system inner membrane component LVJ78_12395 PF00939 Sodium:sulfate symporter transmembrane region LVJ78_12405 PF00580 UvrD/REP helicase N-terminal domain LVJ78_12405 PF13361 UvrD-like helicase C-terminal domain LVJ78_12410 PF02464 Competence-damaged protein LVJ78_12420 PF00356 Bacterial regulatory proteins, lacI family LVJ78_12430 PF12631 MnmE helical domain LVJ78_12430 PF01926 50S ribosome-binding GTPase LVJ78_12430 PF10396 GTP-binding protein TrmE N-terminus