locus-tag class description LVJ83_00005 PF01367 5'-3' exonuclease, C-terminal SAM fold LVJ83_00005 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LVJ83_00005 PF00476 DNA polymerase family A LVJ83_00005 PF01612 3'-5' exonuclease LVJ83_00015 PF00528 Binding-protein-dependent transport system inner membrane component LVJ83_00025 PF00005 ABC transporter LVJ83_00030 PF03641 Possible lysine decarboxylase LVJ83_00035 PF02560 Cyanate lyase C-terminal domain LVJ83_00040 PF07992 Pyridine nucleotide-disulphide oxidoreductase LVJ83_00040 PF18113 Rubredoxin binding C-terminal domain LVJ83_00060 PF01590 GAF domain LVJ83_00060 PF02954 Bacterial regulatory protein, Fis family LVJ83_00060 PF00158 Sigma-54 interaction domain LVJ83_00065 PF00005 ABC transporter LVJ83_00070 PF00528 Binding-protein-dependent transport system inner membrane component LVJ83_00075 PF00005 ABC transporter LVJ83_00085 PF05979 Bacterial protein of unknown function (DUF896) LVJ83_00090 PF02678 Pirin LVJ83_00090 PF05726 Pirin C-terminal cupin domain LVJ83_00100 PF01180 Dihydroorotate dehydrogenase LVJ83_00120 PF00132 Bacterial transferase hexapeptide (six repeats) LVJ83_00120 PF12804 MobA-like NTP transferase domain LVJ83_00125 PF01380 SIS domain LVJ83_00150 PF00485 Phosphoribulokinase / Uridine kinase family LVJ83_00165 PF00842 Alanine racemase, C-terminal domain LVJ83_00165 PF01168 Alanine racemase, N-terminal domain LVJ83_00170 PF00749 tRNA synthetases class I (E and Q), catalytic domain LVJ83_00175 PF02609 Exonuclease VII small subunit LVJ83_00180 PF00348 Polyprenyl synthetase LVJ83_00190 PF01569 PAP2 superfamily LVJ83_00195 PF00483 Nucleotidyl transferase LVJ83_00200 PF02664 S-Ribosylhomocysteinase (LuxS) LVJ83_00210 PF04055 Radical SAM superfamily LVJ83_00210 PF06463 Molybdenum Cofactor Synthesis C LVJ83_00215 PF03023 Lipid II flippase MurJ LVJ83_00220 PF00873 AcrB/AcrD/AcrF family LVJ83_00225 PF01636 Phosphotransferase enzyme family LVJ83_00230 PF04453 LPS transport system D LVJ83_00235 PF00639 PPIC-type PPIASE domain LVJ83_00235 PF09312 SurA N-terminal domain LVJ83_00245 PF10396 GTP-binding protein TrmE N-terminus LVJ83_00245 PF12631 MnmE helical domain LVJ83_00245 PF01926 50S ribosome-binding GTPase LVJ83_00250 PF03831 PhnA domain LVJ83_00250 PF08274 PhnA Zinc-Ribbon LVJ83_00260 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LVJ83_00265 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase LVJ83_00275 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LVJ83_00275 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LVJ83_00280 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LVJ83_00280 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain LVJ83_00300 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase LVJ83_00305 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LVJ83_00305 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LVJ83_00310 PF01980 tRNA-methyltransferase O LVJ83_00310 PF18389 TrmO C-terminal domain LVJ83_00315 PF00857 Isochorismatase family LVJ83_00320 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LVJ83_00325 PF01012 Electron transfer flavoprotein domain LVJ83_00330 PF01012 Electron transfer flavoprotein domain LVJ83_00330 PF00766 Electron transfer flavoprotein FAD-binding domain LVJ83_00335 PF01212 Beta-eliminating lyase LVJ83_00340 PF09186 Domain of unknown function (DUF1949) LVJ83_00340 PF01205 Uncharacterized protein family UPF0029 LVJ83_00345 PF00593 TonB dependent receptor LVJ83_00345 PF07715 TonB-dependent Receptor Plug Domain LVJ83_00350 PF02843 Phosphoribosylglycinamide synthetase, C domain LVJ83_00350 PF02844 Phosphoribosylglycinamide synthetase, N domain LVJ83_00350 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain LVJ83_00360 PF01300 Telomere recombination LVJ83_00370 PF01266 FAD dependent oxidoreductase LVJ83_00380 PF03061 Thioesterase superfamily LVJ83_00385 PF05690 Thiazole biosynthesis protein ThiG LVJ83_00390 PF00218 Indole-3-glycerol phosphate synthase LVJ83_00395 PF03458 UPF0126 domain LVJ83_00400 PF00384 Molybdopterin oxidoreductase LVJ83_00415 PF00528 Binding-protein-dependent transport system inner membrane component LVJ83_00420 PF00005 ABC transporter LVJ83_00420 PF08402 TOBE domain LVJ83_00425 PF01169 Uncharacterized protein family UPF0016 LVJ83_00430 PF00849 RNA pseudouridylate synthase LVJ83_00440 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) LVJ83_00445 PF07813 LTXXQ motif family protein LVJ83_00450 PF00528 Binding-protein-dependent transport system inner membrane component LVJ83_00455 PF00571 CBS domain LVJ83_00455 PF00005 ABC transporter LVJ83_00460 PF04261 Dyp-type peroxidase family LVJ83_00465 PF13473 Cupredoxin-like domain LVJ83_00465 PF09375 Imelysin LVJ83_00470 PF03239 Iron permease FTR1 family LVJ83_00475 PF00962 Adenosine/AMP deaminase LVJ83_00490 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LVJ83_00495 PF01722 BolA-like protein LVJ83_00500 PF00005 ABC transporter LVJ83_00505 PF18075 FtsX extracellular domain LVJ83_00510 PF02464 Competence-damaged protein LVJ83_00515 PF08264 Anticodon-binding domain of tRNA LVJ83_00515 PF09334 tRNA synthetases class I (M) LVJ83_00515 PF01588 Putative tRNA binding domain LVJ83_00520 PF04556 DpnII restriction endonuclease LVJ83_00530 PF01555 DNA methylase LVJ83_00535 PF02086 D12 class N6 adenine-specific DNA methyltransferase LVJ83_00545 PF00488 MutS domain V LVJ83_00545 PF05190 MutS family domain IV LVJ83_00545 PF01624 MutS domain I LVJ83_00545 PF05188 MutS domain II LVJ83_00545 PF05192 MutS domain III LVJ83_00555 PF02810 SEC-C motif LVJ83_00555 PF07517 SecA DEAD-like domain LVJ83_00555 PF01043 SecA preprotein cross-linking domain LVJ83_00555 PF07516 SecA Wing and Scaffold domain LVJ83_00565 PF06733 DEAD_2 LVJ83_00565 PF13307 Helicase C-terminal domain LVJ83_00575 PF00892 EamA-like transporter family LVJ83_00580 PF01268 Formate--tetrahydrofolate ligase LVJ83_00585 PF14403 Circularly permuted ATP-grasp type 2 LVJ83_00595 PF08379 Bacterial transglutaminase-like N-terminal region LVJ83_00595 PF01841 Transglutaminase-like superfamily LVJ83_00605 PF00929 Exonuclease LVJ83_00610 PF03193 RsgA GTPase LVJ83_00615 PF04397 LytTr DNA-binding domain LVJ83_00615 PF00072 Response regulator receiver domain LVJ83_00620 PF00448 SRP54-type protein, GTPase domain LVJ83_00620 PF02881 SRP54-type protein, helical bundle domain LVJ83_00625 PF00675 Insulinase (Peptidase family M16) LVJ83_00625 PF05193 Peptidase M16 inactive domain LVJ83_00635 PF01061 ABC-2 type transporter LVJ83_00640 PF00005 ABC transporter LVJ83_00645 PF12805 FUSC-like inner membrane protein yccS LVJ83_00655 PF00270 DEAD/DEAH box helicase LVJ83_00655 PF11898 Domain of unknown function (DUF3418) LVJ83_00655 PF04408 Helicase associated domain (HA2) LVJ83_00655 PF00271 Helicase conserved C-terminal domain LVJ83_00655 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold LVJ83_00690 PF00939 Sodium:sulfate symporter transmembrane region LVJ83_00695 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LVJ83_00695 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LVJ83_00700 PF01925 Sulfite exporter TauE/SafE LVJ83_00715 PF00580 UvrD/REP helicase N-terminal domain LVJ83_00715 PF13361 UvrD-like helicase C-terminal domain LVJ83_00730 PF01432 Peptidase family M3 LVJ83_00740 PF00152 tRNA synthetases class II (D, K and N) LVJ83_00740 PF01336 OB-fold nucleic acid binding domain LVJ83_00745 PF01235 Sodium:alanine symporter family LVJ83_00760 PF00342 Phosphoglucose isomerase LVJ83_00765 PF00375 Sodium:dicarboxylate symporter family LVJ83_00770 PF17243 POTRA domain TamA domain 1 LVJ83_00770 PF01103 Surface antigen LVJ83_00770 PF07244 Surface antigen variable number repeat LVJ83_00775 PF04357 TamB, inner membrane protein subunit of TAM complex LVJ83_00780 PF13358 DDE superfamily endonuclease LVJ83_00795 PF00561 alpha/beta hydrolase fold LVJ83_00795 PF00364 Biotin-requiring enzyme LVJ83_00800 PF02779 Transketolase, pyrimidine binding domain LVJ83_00800 PF02780 Transketolase, C-terminal domain LVJ83_00805 PF00676 Dehydrogenase E1 component LVJ83_00810 PF01513 ATP-NAD kinase LVJ83_00815 PF00158 Sigma-54 interaction domain LVJ83_00815 PF01590 GAF domain LVJ83_00815 PF02954 Bacterial regulatory protein, Fis family LVJ83_00825 PF02195 ParB-like nuclease domain LVJ83_00825 PF17762 HTH domain found in ParB protein LVJ83_00835 PF00119 ATP synthase A chain LVJ83_00840 PF00137 ATP synthase subunit C LVJ83_00845 PF00430 ATP synthase B/B' CF(0) LVJ83_00850 PF00213 ATP synthase delta (OSCP) subunit LVJ83_00855 PF00306 ATP synthase alpha/beta chain, C terminal domain LVJ83_00855 PF02874 ATP synthase alpha/beta family, beta-barrel domain LVJ83_00855 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LVJ83_00860 PF00231 ATP synthase LVJ83_00865 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LVJ83_00865 PF02874 ATP synthase alpha/beta family, beta-barrel domain LVJ83_00870 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain LVJ83_00880 PF13726 Na+-H+ antiporter family LVJ83_00880 PF03553 Na+/H+ antiporter family LVJ83_00885 PF04102 SlyX LVJ83_00900 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LVJ83_00900 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain LVJ83_00910 PF01491 Frataxin-like domain LVJ83_00920 PF01774 UreD urease accessory protein LVJ83_00925 PF02492 CobW/HypB/UreG, nucleotide-binding domain LVJ83_00930 PF01817 Chorismate mutase type II LVJ83_00930 PF02153 Prephenate dehydrogenase LVJ83_00935 PF04955 HupE / UreJ protein LVJ83_00940 PF01730 UreF LVJ83_00945 PF05194 UreE urease accessory protein, C-terminal domain LVJ83_00945 PF02814 UreE urease accessory protein, N-terminal domain LVJ83_00950 PF00375 Sodium:dicarboxylate symporter family LVJ83_00955 PF00449 Urease alpha-subunit, N-terminal domain LVJ83_00955 PF01979 Amidohydrolase family LVJ83_00960 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain LVJ83_00960 PF00117 Glutamine amidotransferase class-I LVJ83_00965 PF00547 Urease, gamma subunit LVJ83_00970 PF00005 ABC transporter LVJ83_00975 PF12399 Branched-chain amino acid ATP-binding cassette transporter LVJ83_00975 PF00005 ABC transporter LVJ83_00985 PF02653 Branched-chain amino acid transport system / permease component LVJ83_00995 PF00149 Calcineurin-like phosphoesterase LVJ83_01000 PF05199 GMC oxidoreductase LVJ83_01005 PF00171 Aldehyde dehydrogenase family LVJ83_01010 PF16491 CAAX prenyl protease N-terminal, five membrane helices LVJ83_01010 PF01435 Peptidase family M48 LVJ83_01015 PF00849 RNA pseudouridylate synthase LVJ83_01025 PF00773 RNB domain LVJ83_01040 PF01734 Patatin-like phospholipase LVJ83_01045 PF03462 PCRF domain LVJ83_01045 PF00472 RF-1 domain LVJ83_01055 PF00206 Lyase LVJ83_01055 PF08328 Adenylosuccinate lyase C-terminal LVJ83_01065 PF00561 alpha/beta hydrolase fold LVJ83_01070 PF00156 Phosphoribosyl transferase domain LVJ83_01075 PF00588 SpoU rRNA Methylase family LVJ83_01080 PF03330 Lytic transglycolase LVJ83_01080 PF05036 Sporulation related domain LVJ83_01085 PF07499 RuvA, C-terminal domain LVJ83_01085 PF01330 RuvA N terminal domain LVJ83_01090 PF00664 ABC transporter transmembrane region LVJ83_01090 PF00005 ABC transporter LVJ83_01095 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 LVJ83_01100 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LVJ83_01105 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit LVJ83_01110 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit LVJ83_01120 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region LVJ83_01120 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit LVJ83_01120 PF10531 SLBB domain LVJ83_01125 PF00384 Molybdopterin oxidoreductase LVJ83_01125 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region LVJ83_01125 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal LVJ83_01130 PF00146 NADH dehydrogenase LVJ83_01135 PF12838 4Fe-4S dicluster domain LVJ83_01140 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 LVJ83_01145 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LVJ83_01150 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LVJ83_01150 PF00361 Proton-conducting membrane transporter LVJ83_01155 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus LVJ83_01155 PF00361 Proton-conducting membrane transporter LVJ83_01160 PF00361 Proton-conducting membrane transporter LVJ83_01170 PF01472 PUA domain LVJ83_01170 PF00696 Amino acid kinase family LVJ83_01175 PF00486 Transcriptional regulatory protein, C terminal LVJ83_01175 PF00072 Response regulator receiver domain LVJ83_01180 PF00512 His Kinase A (phospho-acceptor) domain LVJ83_01180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LVJ83_01180 PF11808 Phosphate regulon sensor protein PhoR LVJ83_01180 PF00989 PAS fold LVJ83_01200 PF03741 Integral membrane protein TerC family LVJ83_01205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LVJ83_01205 PF03466 LysR substrate binding domain LVJ83_01210 PF03776 Septum formation topological specificity factor MinE LVJ83_01215 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LVJ83_01220 PF03775 Septum formation inhibitor MinC, C-terminal domain LVJ83_01220 PF05209 Septum formation inhibitor MinC, N-terminal domain LVJ83_01230 PF00324 Amino acid permease LVJ83_01235 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LVJ83_01235 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LVJ83_01240 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain LVJ83_01240 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain LVJ83_01275 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LVJ83_01275 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LVJ83_01275 PF09317 Domain of unknown function (DUF1974) LVJ83_01280 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) LVJ83_01285 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LVJ83_01285 PF00378 Enoyl-CoA hydratase/isomerase LVJ83_01285 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LVJ83_01290 PF02803 Thiolase, C-terminal domain LVJ83_01290 PF00108 Thiolase, N-terminal domain LVJ83_01300 PF00578 AhpC/TSA family LVJ83_01300 PF10417 C-terminal domain of 1-Cys peroxiredoxin LVJ83_01305 PF00224 Pyruvate kinase, barrel domain LVJ83_01305 PF02887 Pyruvate kinase, alpha/beta domain LVJ83_01310 PF00132 Bacterial transferase hexapeptide (six repeats) LVJ83_01315 PF07687 Peptidase dimerisation domain LVJ83_01315 PF01546 Peptidase family M20/M25/M40 LVJ83_01325 PF05175 Methyltransferase small domain LVJ83_01325 PF17827 PrmC N-terminal domain LVJ83_01330 PF03448 MgtE intracellular N domain LVJ83_01330 PF01769 Divalent cation transporter LVJ83_01330 PF00571 CBS domain LVJ83_01340 PF04055 Radical SAM superfamily LVJ83_01340 PF01938 TRAM domain LVJ83_01340 PF00919 Uncharacterized protein family UPF0004 LVJ83_01350 PF00860 Permease family LVJ83_01355 PF01116 Fructose-bisphosphate aldolase class-II LVJ83_01360 PF04076 Bacterial OB fold (BOF) protein LVJ83_01365 PF00162 Phosphoglycerate kinase LVJ83_01370 PF07690 Major Facilitator Superfamily LVJ83_01375 PF02646 RmuC family LVJ83_01385 PF01926 50S ribosome-binding GTPase LVJ83_01390 PF00034 Cytochrome c LVJ83_01395 PF05140 ResB-like family LVJ83_01400 PF01578 Cytochrome C assembly protein LVJ83_01405 PF00571 CBS domain LVJ83_01405 PF03741 Integral membrane protein TerC family LVJ83_01405 PF03471 Transporter associated domain LVJ83_01425 PF02381 MraZ protein, putative antitoxin-like LVJ83_01430 PF01795 MraW methylase family LVJ83_01435 PF04999 Cell division protein FtsL LVJ83_01440 PF03717 Penicillin-binding Protein dimerisation domain LVJ83_01440 PF00905 Penicillin binding protein transpeptidase domain LVJ83_01445 PF01225 Mur ligase family, catalytic domain LVJ83_01445 PF08245 Mur ligase middle domain LVJ83_01445 PF02875 Mur ligase family, glutamate ligase domain LVJ83_01455 PF08245 Mur ligase middle domain LVJ83_01455 PF02875 Mur ligase family, glutamate ligase domain LVJ83_01455 PF01225 Mur ligase family, catalytic domain LVJ83_01460 PF00953 Glycosyl transferase family 4 LVJ83_01475 PF08245 Mur ligase middle domain LVJ83_01475 PF02875 Mur ligase family, glutamate ligase domain LVJ83_01480 PF01098 Cell cycle protein LVJ83_01485 PF04101 Glycosyltransferase family 28 C-terminal domain LVJ83_01485 PF03033 Glycosyltransferase family 28 N-terminal domain LVJ83_01495 PF02875 Mur ligase family, glutamate ligase domain LVJ83_01495 PF01225 Mur ligase family, catalytic domain LVJ83_01495 PF08245 Mur ligase middle domain LVJ83_01500 PF07478 D-ala D-ala ligase C-terminus LVJ83_01500 PF01820 D-ala D-ala ligase N-terminus LVJ83_01505 PF03799 Cell division protein FtsQ LVJ83_01505 PF08478 POTRA domain, FtsQ-type LVJ83_01510 PF02491 SHS2 domain inserted in FTSA LVJ83_01515 PF12327 FtsZ family, C-terminal domain LVJ83_01515 PF00091 Tubulin/FtsZ family, GTPase domain LVJ83_01525 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin LVJ83_01530 PF01177 Asp/Glu/Hydantoin racemase LVJ83_01535 PF00521 DNA gyrase/topoisomerase IV, subunit A LVJ83_01540 PF00512 His Kinase A (phospho-acceptor) domain LVJ83_01540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LVJ83_01545 PF00072 Response regulator receiver domain LVJ83_01545 PF00158 Sigma-54 interaction domain LVJ83_01545 PF02954 Bacterial regulatory protein, Fis family LVJ83_01550 PF04445 Putative SAM-dependent methyltransferase LVJ83_01560 PF01047 MarR family LVJ83_01565 PF01613 Flavin reductase like domain LVJ83_01570 PF00484 Carbonic anhydrase LVJ83_01575 PF01467 Cytidylyltransferase-like LVJ83_01585 PF02590 Predicted SPOUT methyltransferase LVJ83_01600 PF13292 1-deoxy-D-xylulose-5-phosphate synthase LVJ83_01600 PF02780 Transketolase, C-terminal domain LVJ83_01600 PF02779 Transketolase, pyrimidine binding domain LVJ83_01605 PF03313 Serine dehydratase alpha chain LVJ83_01605 PF03315 Serine dehydratase beta chain LVJ83_01615 PF00924 Mechanosensitive ion channel LVJ83_01615 PF05552 Conserved TM helix LVJ83_01620 PF02696 Uncharacterized ACR, YdiU/UPF0061 family LVJ83_01625 PF01207 Dihydrouridine synthase (Dus) LVJ83_01630 PF02954 Bacterial regulatory protein, Fis family LVJ83_01635 PF02142 MGS-like domain LVJ83_01635 PF01808 AICARFT/IMPCHase bienzyme LVJ83_01645 PF00202 Aminotransferase class-III LVJ83_01650 PF07690 Major Facilitator Superfamily LVJ83_01655 PF02779 Transketolase, pyrimidine binding domain LVJ83_01655 PF02780 Transketolase, C-terminal domain LVJ83_01660 PF00456 Transketolase, thiamine diphosphate binding domain LVJ83_01670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LVJ83_01670 PF03466 LysR substrate binding domain LVJ83_01680 PF01928 CYTH domain LVJ83_01685 PF03653 Uncharacterised protein family (UPF0093) LVJ83_01695 PF03960 ArsC family LVJ83_01705 PF00578 AhpC/TSA family LVJ83_01740 PF05958 tRNA (Uracil-5-)-methyltransferase LVJ83_01750 PF03009 Glycerophosphoryl diester phosphodiesterase family LVJ83_01755 PF01068 ATP dependent DNA ligase domain LVJ83_01755 PF14743 DNA ligase OB-like domain LVJ83_01760 PF00753 Metallo-beta-lactamase superfamily LVJ83_01775 PF01384 Phosphate transporter family LVJ83_01780 PF02096 60Kd inner membrane protein LVJ83_01780 PF14849 YidC periplasmic domain LVJ83_01785 PF01809 Putative membrane protein insertion efficiency factor LVJ83_01790 PF00825 Ribonuclease P LVJ83_01795 PF00468 Ribosomal protein L34 LVJ83_01800 PF00308 Bacterial dnaA protein LVJ83_01800 PF08299 Bacterial dnaA protein helix-turn-helix LVJ83_01800 PF11638 DnaA N-terminal domain LVJ83_01805 PF02768 DNA polymerase III beta subunit, C-terminal domain LVJ83_01805 PF00712 DNA polymerase III beta subunit, N-terminal domain LVJ83_01805 PF02767 DNA polymerase III beta subunit, central domain LVJ83_01810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LVJ83_01810 PF03466 LysR substrate binding domain LVJ83_01815 PF03788 LrgA family LVJ83_01820 PF04172 LrgB-like family LVJ83_01825 PF00204 DNA gyrase B LVJ83_01825 PF00986 DNA gyrase B subunit, carboxyl terminus LVJ83_01825 PF18053 DNA gyrase B subunit insert domain LVJ83_01825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LVJ83_01825 PF01751 Toprim domain LVJ83_01830 PF01180 Dihydroorotate dehydrogenase LVJ83_01835 PF00206 Lyase LVJ83_01835 PF10415 Fumarase C C-terminus LVJ83_01840 PF01343 Peptidase family S49 LVJ83_01840 PF06965 Na+/H+ antiporter 1 LVJ83_01845 PF13419 Haloacid dehalogenase-like hydrolase LVJ83_01850 PF01381 Helix-turn-helix LVJ83_01860 PF11008 Protein of unknown function (DUF2846) LVJ83_01865 PF01479 S4 domain LVJ83_01865 PF00849 RNA pseudouridylate synthase LVJ83_01870 PF00575 S1 RNA binding domain LVJ83_01870 PF10150 Ribonuclease E/G family LVJ83_01870 PF12111 Polyribonucleotide phosphorylase C terminal LVJ83_01880 PF12806 Acetyl-CoA dehydrogenase C-terminal like LVJ83_01880 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LVJ83_01880 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LVJ83_01880 PF02770 Acyl-CoA dehydrogenase, middle domain LVJ83_01885 PF00575 S1 RNA binding domain LVJ83_01885 PF09371 Tex-like protein N-terminal domain LVJ83_01885 PF16921 Tex protein YqgF-like domain LVJ83_01885 PF17674 HHH domain LVJ83_01890 PF13395 HNH endonuclease LVJ83_01890 PF18541 RuvC endonuclease subdomain 3 LVJ83_01895 PF01867 CRISPR associated protein Cas1 LVJ83_01915 PF00267 Gram-negative porin LVJ83_01925 PF01553 Acyltransferase LVJ83_01930 PF03544 Gram-negative bacterial TonB protein C-terminal LVJ83_01935 PF01618 MotA/TolQ/ExbB proton channel family LVJ83_01940 PF02472 Biopolymer transport protein ExbD/TolR LVJ83_01945 PF00909 Ammonium Transporter Family LVJ83_01950 PF00543 Nitrogen regulatory protein P-II LVJ83_01965 PF01551 Peptidase family M23 LVJ83_01965 PF01476 LysM domain LVJ83_01980 PF02525 Flavodoxin-like fold LVJ83_01985 PF01638 HxlR-like helix-turn-helix LVJ83_01990 PF01812 5-formyltetrahydrofolate cyclo-ligase family LVJ83_01995 PF00291 Pyridoxal-phosphate dependent enzyme LVJ83_02000 PF00107 Zinc-binding dehydrogenase LVJ83_02000 PF08240 Alcohol dehydrogenase GroES-like domain LVJ83_02005 PF01638 HxlR-like helix-turn-helix LVJ83_02015 PF00318 Ribosomal protein S2 LVJ83_02020 PF00889 Elongation factor TS LVJ83_02025 PF00696 Amino acid kinase family LVJ83_02030 PF01765 Ribosome recycling factor LVJ83_02035 PF01255 Putative undecaprenyl diphosphate synthase LVJ83_02045 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain LVJ83_02045 PF13288 DXP reductoisomerase C-terminal domain LVJ83_02045 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase LVJ83_02050 PF17820 PDZ domain LVJ83_02050 PF02163 Peptidase family M50 LVJ83_02055 PF01103 Surface antigen LVJ83_02055 PF07244 Surface antigen variable number repeat LVJ83_02065 PF00132 Bacterial transferase hexapeptide (six repeats) LVJ83_02065 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD LVJ83_02070 PF07977 FabA-like domain LVJ83_02075 PF00132 Bacterial transferase hexapeptide (six repeats) LVJ83_02075 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 LVJ83_02080 PF00593 TonB dependent receptor LVJ83_02080 PF07715 TonB-dependent Receptor Plug Domain LVJ83_02085 PF01497 Periplasmic binding protein LVJ83_02090 PF01032 FecCD transport family LVJ83_02095 PF01032 FecCD transport family LVJ83_02100 PF00005 ABC transporter LVJ83_02105 PF01965 DJ-1/PfpI family LVJ83_02115 PF00171 Aldehyde dehydrogenase family LVJ83_02125 PF02684 Lipid-A-disaccharide synthetase LVJ83_02130 PF01351 Ribonuclease HII LVJ83_02135 PF09827 CRISPR associated protein Cas2 LVJ83_02140 PF01867 CRISPR associated protein Cas1 LVJ83_02145 PF13395 HNH endonuclease LVJ83_02145 PF18541 RuvC endonuclease subdomain 3 LVJ83_02150 PF02899 Phage integrase, N-terminal SAM-like domain LVJ83_02150 PF00589 Phage integrase family LVJ83_02165 PF00582 Universal stress protein family LVJ83_02170 PF08361 MAATS-type transcriptional repressor, C-terminal region LVJ83_02170 PF00440 Bacterial regulatory proteins, tetR family LVJ83_02175 PF00529 HlyD membrane-fusion protein of T1SS LVJ83_02175 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LVJ83_02180 PF00873 AcrB/AcrD/AcrF family LVJ83_02185 PF02321 Outer membrane efflux protein LVJ83_02190 PF00830 Ribosomal L28 family LVJ83_02195 PF00471 Ribosomal protein L33 LVJ83_02205 PF02774 Semialdehyde dehydrogenase, dimerisation domain LVJ83_02205 PF01118 Semialdehyde dehydrogenase, NAD binding domain LVJ83_02215 PF00085 Thioredoxin LVJ83_02215 PF02683 Cytochrome C biogenesis protein transmembrane region LVJ83_02215 PF11412 Disulphide bond corrector protein DsbC LVJ83_02230 PF04575 Protein of unknown function (DUF560) LVJ83_02235 PF02649 Type I GTP cyclohydrolase folE2 LVJ83_02240 PF01053 Cys/Met metabolism PLP-dependent enzyme LVJ83_02245 PF07992 Pyridine nucleotide-disulphide oxidoreductase LVJ83_02250 PF01556 DnaJ C terminal domain LVJ83_02250 PF00226 DnaJ domain LVJ83_02250 PF00684 DnaJ central domain LVJ83_02255 PF00970 Oxidoreductase FAD-binding domain LVJ83_02255 PF00175 Oxidoreductase NAD-binding domain LVJ83_02265 PF00575 S1 RNA binding domain LVJ83_02265 PF03725 3' exoribonuclease family, domain 2 LVJ83_02265 PF00013 KH domain LVJ83_02265 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain LVJ83_02265 PF01138 3' exoribonuclease family, domain 1 LVJ83_02270 PF00465 Iron-containing alcohol dehydrogenase LVJ83_02270 PF00171 Aldehyde dehydrogenase family LVJ83_02280 PF00551 Formyl transferase LVJ83_02280 PF01842 ACT domain LVJ83_02285 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain LVJ83_02285 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain LVJ83_02305 PF01467 Cytidylyltransferase-like LVJ83_02310 PF02237 Biotin protein ligase C terminal domain LVJ83_02310 PF03309 Type III pantothenate kinase LVJ83_02310 PF03099 Biotin/lipoate A/B protein ligase family LVJ83_02335 PF01523 Putative modulator of DNA gyrase LVJ83_02345 PF01027 Inhibitor of apoptosis-promoting Bax1 LVJ83_02350 PF01040 UbiA prenyltransferase family LVJ83_02355 PF04362 Bacterial Fe(2+) trafficking LVJ83_02360 PF00696 Amino acid kinase family LVJ83_02360 PF00583 Acetyltransferase (GNAT) family LVJ83_02370 PF00156 Phosphoribosyl transferase domain LVJ83_02375 PF03372 Endonuclease/Exonuclease/phosphatase family LVJ83_02390 PF06968 Biotin and Thiamin Synthesis associated domain LVJ83_02390 PF04055 Radical SAM superfamily LVJ83_02395 PF00378 Enoyl-CoA hydratase/isomerase LVJ83_02410 PF13580 SIS domain LVJ83_02415 PF02021 Uncharacterised protein family UPF0102 LVJ83_02420 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LVJ83_02430 PF00106 short chain dehydrogenase LVJ83_02435 PF03466 LysR substrate binding domain LVJ83_02435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LVJ83_02440 PF07681 DoxX LVJ83_02450 PF00923 Transaldolase/Fructose-6-phosphate aldolase LVJ83_02455 PF00571 CBS domain LVJ83_02455 PF01380 SIS domain LVJ83_02470 PF03968 OstA-like protein LVJ83_02475 PF12399 Branched-chain amino acid ATP-binding cassette transporter LVJ83_02475 PF00005 ABC transporter LVJ83_02480 PF04552 Sigma-54, DNA binding domain LVJ83_02480 PF04963 Sigma-54 factor, core binding domain LVJ83_02480 PF00309 Sigma-54 factor, Activator interacting domain (AID) LVJ83_02485 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein LVJ83_02500 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LVJ83_02500 PF00289 Biotin carboxylase, N-terminal domain LVJ83_02500 PF02785 Biotin carboxylase C-terminal domain LVJ83_02505 PF00364 Biotin-requiring enzyme LVJ83_02510 PF02547 Queuosine biosynthesis protein LVJ83_02515 PF13807 G-rich domain on putative tyrosine kinase LVJ83_02515 PF13614 AAA domain LVJ83_02515 PF02706 Chain length determinant protein LVJ83_02520 PF01451 Low molecular weight phosphotyrosine protein phosphatase LVJ83_02525 PF02563 Polysaccharide biosynthesis/export protein LVJ83_02525 PF10531 SLBB domain LVJ83_02525 PF18412 Outer-membrane lipoprotein Wza C-terminal domain LVJ83_02530 PF02719 Polysaccharide biosynthesis protein LVJ83_02535 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LVJ83_02550 PF02397 Bacterial sugar transferase LVJ83_02560 PF00534 Glycosyl transferases group 1 LVJ83_02560 PF13477 Glycosyl transferase 4-like LVJ83_02570 PF13439 Glycosyltransferase Family 4 LVJ83_02580 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LVJ83_02580 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LVJ83_02580 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LVJ83_02585 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LVJ83_02585 PF01872 RibD C-terminal domain LVJ83_02595 PF03477 ATP cone domain LVJ83_02600 PF13230 Glutamine amidotransferases class-II LVJ83_02605 PF01430 Hsp33 protein LVJ83_02610 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LVJ83_02610 PF00056 lactate/malate dehydrogenase, NAD binding domain LVJ83_02615 PF01738 Dienelactone hydrolase family LVJ83_02620 PF00005 ABC transporter LVJ83_02620 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LVJ83_02625 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LVJ83_02625 PF00005 ABC transporter LVJ83_02630 PF00528 Binding-protein-dependent transport system inner membrane component LVJ83_02630 PF12911 N-terminal TM domain of oligopeptide transport permease C LVJ83_02635 PF00528 Binding-protein-dependent transport system inner membrane component LVJ83_02640 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LVJ83_02645 PF01741 Large-conductance mechanosensitive channel, MscL LVJ83_02655 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LVJ83_02665 PF01022 Bacterial regulatory protein, arsR family LVJ83_02675 PF17432 Domain of unknown function (DUF3458_C) ARM repeats LVJ83_02675 PF11940 Domain of unknown function (DUF3458) Ig-like fold LVJ83_02675 PF01433 Peptidase family M1 domain LVJ83_02680 PF05656 Protein of unknown function (DUF805) LVJ83_02695 PF00691 OmpA family LVJ83_02695 PF13488 Glycine zipper LVJ83_02705 PF06071 Protein of unknown function (DUF933) LVJ83_02705 PF01926 50S ribosome-binding GTPase LVJ83_02720 PF00579 tRNA synthetases class I (W and Y) LVJ83_02730 PF00871 Acetokinase family LVJ83_02735 PF04303 PrpF protein LVJ83_02740 PF10786 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) LVJ83_02750 PF06039 Malate:quinone oxidoreductase (Mqo) LVJ83_02755 PF00694 Aconitase C-terminal domain LVJ83_02755 PF00330 Aconitase family (aconitate hydratase) LVJ83_02765 PF00285 Citrate synthase, C-terminal domain LVJ83_02775 PF02631 RecX family LVJ83_02780 PF13419 Haloacid dehalogenase-like hydrolase LVJ83_02785 PF07690 Major Facilitator Superfamily LVJ83_02790 PF13840 ACT domain LVJ83_02790 PF00696 Amino acid kinase family LVJ83_02790 PF01842 ACT domain LVJ83_02800 PF13333 Integrase core domain LVJ83_02800 PF13276 HTH-like domain LVJ83_02800 PF00665 Integrase core domain LVJ83_02815 PF05573 NosL LVJ83_02820 PF12679 ABC-2 family transporter protein LVJ83_02825 PF00005 ABC transporter LVJ83_02835 PF13473 Cupredoxin-like domain LVJ83_02835 PF18764 Nitrous oxide reductase propeller repeat LVJ83_02835 PF18793 Nitrous oxide reductase propeller repeat 2 LVJ83_02840 PF12801 4Fe-4S binding domain LVJ83_02840 PF04205 FMN-binding domain LVJ83_02845 PF05175 Methyltransferase small domain LVJ83_02845 PF08468 Methyltransferase small domain N-terminal LVJ83_02850 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LVJ83_02850 PF07992 Pyridine nucleotide-disulphide oxidoreductase LVJ83_02865 PF08340 Domain of unknown function (DUF1732) LVJ83_02865 PF03755 YicC-like family, N-terminal region LVJ83_02870 PF03725 3' exoribonuclease family, domain 2 LVJ83_02870 PF01138 3' exoribonuclease family, domain 1 LVJ83_02875 PF00665 Integrase core domain LVJ83_02875 PF13276 HTH-like domain LVJ83_02875 PF13333 Integrase core domain LVJ83_02885 PF01435 Peptidase family M48 LVJ83_02890 PF00171 Aldehyde dehydrogenase family LVJ83_02900 PF04055 Radical SAM superfamily LVJ83_02900 PF06969 HemN C-terminal domain LVJ83_02905 PF00027 Cyclic nucleotide-binding domain LVJ83_02905 PF13545 Crp-like helix-turn-helix domain LVJ83_02910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LVJ83_02910 PF03466 LysR substrate binding domain LVJ83_02915 PF00691 OmpA family LVJ83_02920 PF00586 AIR synthase related protein, N-terminal domain LVJ83_02920 PF02769 AIR synthase related protein, C-terminal domain LVJ83_02925 PF04608 Phosphatidylglycerophosphatase A LVJ83_02930 PF04379 ApaG domain LVJ83_02935 PF01235 Sodium:alanine symporter family LVJ83_02955 PF03471 Transporter associated domain LVJ83_02955 PF00571 CBS domain LVJ83_02960 PF02130 Uncharacterized protein family UPF0054 LVJ83_02985 PF00437 Type II/IV secretion system protein LVJ83_02985 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LVJ83_02990 PF00482 Type II secretion system (T2SS), protein F LVJ83_02995 PF06750 Bacterial Peptidase A24 N-terminal domain LVJ83_02995 PF01478 Type IV leader peptidase family LVJ83_03000 PF01121 Dephospho-CoA kinase LVJ83_03005 PF07072 Cell division protein LVJ83_03010 PF03884 DNA gyrase inhibitor YacG LVJ83_03020 PF08264 Anticodon-binding domain of tRNA LVJ83_03020 PF00133 tRNA synthetases class I (I, L, M and V) LVJ83_03020 PF10458 Valyl tRNA synthetase tRNA binding arm LVJ83_03030 PF00557 Metallopeptidase family M24 LVJ83_03045 PF01569 PAP2 superfamily LVJ83_03050 PF04751 Protein of unknown function (DUF615) LVJ83_03055 PF01523 Putative modulator of DNA gyrase LVJ83_03060 PF00267 Gram-negative porin LVJ83_03065 PF05643 Putative bacterial lipoprotein (DUF799) LVJ83_03075 PF03783 Curli production assembly/transport component CsgG LVJ83_03120 PF08479 POTRA domain, ShlB-type LVJ83_03120 PF17287 POTRA domain LVJ83_03120 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB LVJ83_03125 PF02600 Disulfide bond formation protein DsbB LVJ83_03130 PF01235 Sodium:alanine symporter family LVJ83_03140 PF01266 FAD dependent oxidoreductase LVJ83_03140 PF05430 S-adenosyl-L-methionine-dependent methyltransferase LVJ83_03145 PF05544 Proline racemase LVJ83_03150 PF02615 Malate/L-lactate dehydrogenase LVJ83_03155 PF00701 Dihydrodipicolinate synthetase family LVJ83_03160 PF07729 FCD domain LVJ83_03160 PF00392 Bacterial regulatory proteins, gntR family LVJ83_03165 PF00171 Aldehyde dehydrogenase family LVJ83_03170 PF00330 Aconitase family (aconitate hydratase) LVJ83_03170 PF06434 Aconitate hydratase 2 N-terminus LVJ83_03170 PF11791 Aconitate B N-terminal domain LVJ83_03180 PF02562 PhoH-like protein LVJ83_03185 PF00155 Aminotransferase class I and II LVJ83_03190 PF00475 Imidazoleglycerol-phosphate dehydratase LVJ83_03200 PF00497 Bacterial extracellular solute-binding proteins, family 3 LVJ83_03205 PF00528 Binding-protein-dependent transport system inner membrane component LVJ83_03210 PF00528 Binding-protein-dependent transport system inner membrane component LVJ83_03215 PF00005 ABC transporter LVJ83_03230 PF00117 Glutamine amidotransferase class-I LVJ83_03235 PF00977 Histidine biosynthesis protein LVJ83_03245 PF00977 Histidine biosynthesis protein LVJ83_03260 PF01425 Amidase LVJ83_03265 PF01502 Phosphoribosyl-AMP cyclohydrolase LVJ83_03270 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase LVJ83_03280 PF02416 mttA/Hcf106 family LVJ83_03285 PF02416 mttA/Hcf106 family LVJ83_03290 PF00902 Sec-independent protein translocase protein (TatC) LVJ83_03305 PF00072 Response regulator receiver domain LVJ83_03305 PF00486 Transcriptional regulatory protein, C terminal LVJ83_03310 PF00989 PAS fold LVJ83_03310 PF11808 Phosphate regulon sensor protein PhoR LVJ83_03310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LVJ83_03310 PF00512 His Kinase A (phospho-acceptor) domain LVJ83_03325 PF01842 ACT domain LVJ83_03325 PF02153 Prephenate dehydrogenase LVJ83_03340 PF00115 Cytochrome C and Quinol oxidase polypeptide I LVJ83_03355 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP LVJ83_03355 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LVJ83_03360 PF00994 Probable molybdopterin binding domain LVJ83_03360 PF18146 Damage-inducible protein CinA KH domain LVJ83_03360 PF02464 Competence-damaged protein LVJ83_03365 PF00764 Arginosuccinate synthase LVJ83_03375 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LVJ83_03380 PF02545 Maf-like protein LVJ83_03390 PF01783 Ribosomal L32p protein family LVJ83_03395 PF00156 Phosphoribosyl transferase domain LVJ83_03400 PF02504 Fatty acid synthesis protein LVJ83_03405 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LVJ83_03405 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LVJ83_03415 PF00698 Acyl transferase domain LVJ83_03435 PF00999 Sodium/hydrogen exchanger family LVJ83_03435 PF02254 TrkA-N domain LVJ83_03455 PF02091 Glycyl-tRNA synthetase alpha subunit LVJ83_03465 PF05746 DALR anticodon binding domain LVJ83_03465 PF02092 Glycyl-tRNA synthetase beta subunit LVJ83_03475 PF16363 GDP-mannose 4,6 dehydratase LVJ83_03480 PF00483 Nucleotidyl transferase LVJ83_03485 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase LVJ83_03490 PF13439 Glycosyltransferase Family 4 LVJ83_03490 PF00534 Glycosyl transferases group 1 LVJ83_03540 PF00925 GTP cyclohydrolase II LVJ83_03555 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LVJ83_03555 PF00128 Alpha amylase, catalytic domain LVJ83_03555 PF02806 Alpha amylase, C-terminal all-beta domain LVJ83_03560 PF00128 Alpha amylase, catalytic domain LVJ83_03560 PF18390 Glycogen debranching enzyme C-terminal domain LVJ83_03560 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LVJ83_03565 PF00483 Nucleotidyl transferase LVJ83_03570 PF08323 Starch synthase catalytic domain LVJ83_03570 PF00534 Glycosyl transferases group 1 LVJ83_03575 PF00343 Carbohydrate phosphorylase LVJ83_03580 PF00403 Heavy-metal-associated domain LVJ83_03585 PF08502 LeuA allosteric (dimerisation) domain LVJ83_03585 PF00682 HMGL-like LVJ83_03590 PF05175 Methyltransferase small domain LVJ83_03595 PF09611 CRISPR-associated protein (Cas_Csy1) LVJ83_03600 PF09614 CRISPR-associated protein (Cas_Csy2) LVJ83_03605 PF09615 CRISPR-associated protein (Cas_Csy3) LVJ83_03615 PF18019 HD domain LVJ83_03620 PF01867 CRISPR associated protein Cas1 LVJ83_03625 PF01081 KDPG and KHG aldolase LVJ83_03630 PF00920 Dehydratase family LVJ83_03635 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain LVJ83_03635 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain LVJ83_03640 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase LVJ83_03645 PF02685 Glucokinase LVJ83_03650 PF02685 Glucokinase LVJ83_03650 PF01418 Helix-turn-helix domain, rpiR family LVJ83_03650 PF01380 SIS domain LVJ83_03655 PF00342 Phosphoglucose isomerase LVJ83_03660 PF07690 Major Facilitator Superfamily LVJ83_03665 PF03553 Na+/H+ antiporter family LVJ83_03670 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LVJ83_03670 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LVJ83_03680 PF01479 S4 domain LVJ83_03680 PF00849 RNA pseudouridylate synthase LVJ83_03690 PF00929 Exonuclease LVJ83_03695 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase LVJ83_03700 PF02542 YgbB family LVJ83_03705 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) LVJ83_03715 PF10576 Iron-sulfur binding domain of endonuclease III LVJ83_03715 PF00633 Helix-hairpin-helix motif LVJ83_03715 PF00730 HhH-GPD superfamily base excision DNA repair protein LVJ83_03720 PF13180 PDZ domain LVJ83_03725 PF00933 Glycosyl hydrolase family 3 N terminal domain LVJ83_03730 PF00155 Aminotransferase class I and II LVJ83_03735 PF04328 Selenoprotein, putative LVJ83_03740 PF02554 Carbon starvation protein CstA LVJ83_03740 PF13722 5TM C-terminal transporter carbon starvation CstA LVJ83_03750 PF02554 Carbon starvation protein CstA LVJ83_03750 PF13722 5TM C-terminal transporter carbon starvation CstA LVJ83_03755 PF01207 Dihydrouridine synthase (Dus) LVJ83_03760 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LVJ83_03765 PF01906 Putative heavy-metal-binding LVJ83_03770 PF01906 Putative heavy-metal-binding LVJ83_03775 PF01435 Peptidase family M48 LVJ83_03775 PF07720 Tetratricopeptide repeat LVJ83_03780 PF00294 pfkB family carbohydrate kinase LVJ83_03785 PF01370 NAD dependent epimerase/dehydratase family LVJ83_03790 PF03737 Aldolase/RraA LVJ83_03795 PF02566 OsmC-like protein LVJ83_03805 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LVJ83_03805 PF07992 Pyridine nucleotide-disulphide oxidoreductase LVJ83_03810 PF08534 Redoxin LVJ83_03810 PF00462 Glutaredoxin LVJ83_03815 PF01553 Acyltransferase LVJ83_03820 PF06827 Zinc finger found in FPG and IleRS LVJ83_03820 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LVJ83_03820 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LVJ83_03825 PF00293 NUDIX domain LVJ83_03850 PF00899 ThiF family LVJ83_03855 PF00582 Universal stress protein family LVJ83_03860 PF08501 Shikimate dehydrogenase substrate binding domain LVJ83_03860 PF01488 Shikimate / quinate 5-dehydrogenase LVJ83_03860 PF18317 Shikimate 5'-dehydrogenase C-terminal domain LVJ83_03870 PF00312 Ribosomal protein S15 LVJ83_03875 PF01509 TruB family pseudouridylate synthase (N terminal domain) LVJ83_03875 PF16198 tRNA pseudouridylate synthase B C-terminal domain LVJ83_03875 PF09157 Pseudouridine synthase II TruB, C-terminal LVJ83_03880 PF02033 Ribosome-binding factor A LVJ83_03885 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LVJ83_03885 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LVJ83_03890 PF06779 Uncharacterised MFS-type transporter YbfB LVJ83_03895 PF01361 Tautomerase enzyme LVJ83_03910 PF05191 Adenylate kinase, active site lid LVJ83_03915 PF02348 Cytidylyltransferase LVJ83_03920 PF03966 Trm112p-like protein LVJ83_03925 PF02606 Tetraacyldisaccharide-1-P 4'-kinase LVJ83_03930 PF13742 OB-fold nucleic acid binding domain LVJ83_03930 PF02601 Exonuclease VII, large subunit LVJ83_03935 PF00155 Aminotransferase class I and II LVJ83_03940 PF03060 Nitronate monooxygenase LVJ83_03945 PF00149 Calcineurin-like phosphoesterase LVJ83_03950 PF01042 Endoribonuclease L-PSP LVJ83_03955 PF04055 Radical SAM superfamily LVJ83_03955 PF06969 HemN C-terminal domain LVJ83_03960 PF01725 Ham1 family LVJ83_03970 PF00005 ABC transporter LVJ83_03970 PF06472 ABC transporter transmembrane region 2 LVJ83_03975 PF05193 Peptidase M16 inactive domain LVJ83_03975 PF00675 Insulinase (Peptidase family M16) LVJ83_03980 PF07715 TonB-dependent Receptor Plug Domain LVJ83_03985 PF00111 2Fe-2S iron-sulfur cluster binding domain LVJ83_03985 PF03476 MOSC N-terminal beta barrel domain LVJ83_03985 PF03473 MOSC domain LVJ83_03990 PF00127 Copper binding proteins, plastocyanin/azurin family LVJ83_04000 PF07516 SecA Wing and Scaffold domain LVJ83_04000 PF01043 SecA preprotein cross-linking domain LVJ83_04000 PF07517 SecA DEAD-like domain LVJ83_04000 PF02810 SEC-C motif LVJ83_04005 PF00206 Lyase LVJ83_04005 PF10415 Fumarase C C-terminus LVJ83_04010 PF18073 Rubredoxin metal binding domain LVJ83_04025 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain LVJ83_04025 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase LVJ83_04030 PF00303 Thymidylate synthase LVJ83_04035 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LVJ83_04045 PF12848 ABC transporter LVJ83_04045 PF00005 ABC transporter LVJ83_04050 PF00484 Carbonic anhydrase LVJ83_04055 PF03129 Anticodon binding domain LVJ83_04055 PF04073 Aminoacyl-tRNA editing domain LVJ83_04055 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LVJ83_04060 PF01557 Fumarylacetoacetate (FAA) hydrolase family LVJ83_04065 PF00497 Bacterial extracellular solute-binding proteins, family 3 LVJ83_04070 PF00528 Binding-protein-dependent transport system inner membrane component LVJ83_04075 PF00005 ABC transporter LVJ83_04080 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase LVJ83_04095 PF00291 Pyridoxal-phosphate dependent enzyme LVJ83_04105 PF05167 Uncharacterised ACR (DUF711) LVJ83_04115 PF00270 DEAD/DEAH box helicase LVJ83_04115 PF00271 Helicase conserved C-terminal domain LVJ83_04125 PF01206 Sulfurtransferase TusA LVJ83_04135 PF01979 Amidohydrolase family LVJ83_04140 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain LVJ83_04140 PF01464 Transglycosylase SLT domain LVJ83_04145 PF07690 Major Facilitator Superfamily LVJ83_04150 PF00436 Single-strand binding protein family LVJ83_04160 PF01272 Transcription elongation factor, GreA/GreB, C-term LVJ83_04160 PF03449 Transcription elongation factor, N-terminal LVJ83_04170 PF01985 CRS1 / YhbY (CRM) domain LVJ83_04175 PF01728 FtsJ-like methyltransferase LVJ83_04180 PF17862 AAA+ lid domain LVJ83_04180 PF00004 ATPase family associated with various cellular activities (AAA) LVJ83_04180 PF06480 FtsH Extracellular LVJ83_04180 PF01434 Peptidase family M41 LVJ83_04185 PF00809 Pterin binding enzyme LVJ83_04190 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LVJ83_04190 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LVJ83_04190 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LVJ83_04190 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LVJ83_04195 PF09335 SNARE associated Golgi protein LVJ83_04200 PF00491 Arginase family LVJ83_04205 PF17763 Glutaminase/Asparaginase C-terminal domain LVJ83_04205 PF00710 Asparaginase, N-terminal LVJ83_04225 PF02618 YceG-like family LVJ83_04230 PF01641 SelR domain LVJ83_04235 PF01510 N-acetylmuramoyl-L-alanine amidase LVJ83_04250 PF00533 BRCA1 C Terminus (BRCT) domain LVJ83_04250 PF01653 NAD-dependent DNA ligase adenylation domain LVJ83_04250 PF03120 NAD-dependent DNA ligase OB-fold domain LVJ83_04250 PF03119 NAD-dependent DNA ligase C4 zinc finger domain LVJ83_04250 PF12826 Helix-hairpin-helix motif LVJ83_04255 PF00483 Nucleotidyl transferase LVJ83_04260 PF04715 Anthranilate synthase component I, N terminal region LVJ83_04260 PF00425 chorismate binding enzyme LVJ83_04265 PF03976 Polyphosphate kinase 2 (PPK2) LVJ83_04275 PF01593 Flavin containing amine oxidoreductase LVJ83_04280 PF00106 short chain dehydrogenase LVJ83_04290 PF01245 Ribosomal protein L19 LVJ83_04295 PF01746 tRNA (Guanine-1)-methyltransferase LVJ83_04300 PF05239 PRC-barrel domain LVJ83_04300 PF01782 RimM N-terminal domain LVJ83_04305 PF00886 Ribosomal protein S16 LVJ83_04315 PF01761 3-dehydroquinate synthase LVJ83_04320 PF01202 Shikimate kinase LVJ83_04325 PF11741 AMIN domain LVJ83_04325 PF00263 Bacterial type II and III secretion system protein LVJ83_04325 PF03958 Bacterial type II/III secretion system short domain LVJ83_04325 PF07660 Secretin and TonB N terminus short domain LVJ83_04335 PF04350 Pilus assembly protein, PilO LVJ83_04340 PF05137 Fimbrial assembly protein (PilN) LVJ83_04355 PF04546 Sigma-70, non-essential region LVJ83_04355 PF03979 Sigma-70 factor, region 1.1 LVJ83_04355 PF00140 Sigma-70 factor, region 1.2 LVJ83_04355 PF04539 Sigma-70 region 3 LVJ83_04355 PF04545 Sigma-70, region 4 LVJ83_04355 PF04542 Sigma-70 region 2 LVJ83_04360 PF08278 DNA primase DnaG DnaB-binding LVJ83_04360 PF01807 CHC2 zinc finger LVJ83_04360 PF10410 DnaB-helicase binding domain of primase LVJ83_04360 PF08275 DNA primase catalytic core, N-terminal domain LVJ83_04365 PF09424 Yqey-like protein LVJ83_04370 PF01165 Ribosomal protein S21 LVJ83_04375 PF13291 ACT domain LVJ83_04375 PF04607 Region found in RelA / SpoT proteins LVJ83_04375 PF02824 TGS domain LVJ83_04380 PF01192 RNA polymerase Rpb6 LVJ83_04385 PF00625 Guanylate kinase LVJ83_04390 PF00156 Phosphoribosyl transferase domain LVJ83_04395 PF00768 D-alanyl-D-alanine carboxypeptidase LVJ83_04400 PF07724 AAA domain (Cdc48 subfamily) LVJ83_04400 PF10431 C-terminal, D2-small domain, of ClpB protein LVJ83_04400 PF06689 ClpX C4-type zinc finger LVJ83_04410 PF17484 N-Lobe handle Tf-binding protein B LVJ83_04410 PF01298 C-lobe and N-lobe beta barrels of Tf-binding protein B LVJ83_04410 PF17483 C-lobe handle domain of Tf-binding protein B LVJ83_04415 PF00593 TonB dependent receptor LVJ83_04415 PF07715 TonB-dependent Receptor Plug Domain LVJ83_04420 PF00271 Helicase conserved C-terminal domain LVJ83_04420 PF00270 DEAD/DEAH box helicase LVJ83_04420 PF17191 RecG wedge domain LVJ83_04430 PF02565 Recombination protein O C terminal LVJ83_04430 PF11967 Recombination protein O N terminal LVJ83_04435 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ LVJ83_04440 PF01648 4'-phosphopantetheinyl transferase superfamily LVJ83_04455 PF04380 Membrane fusogenic activity LVJ83_04460 PF01078 Magnesium chelatase, subunit ChlI LVJ83_04460 PF13335 Magnesium chelatase, subunit ChlI C-terminal LVJ83_04470 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LVJ83_04475 PF01323 DSBA-like thioredoxin domain LVJ83_04480 PF02673 Bacitracin resistance protein BacA LVJ83_04485 PF04392 ABC transporter substrate binding protein LVJ83_04495 PF00005 ABC transporter LVJ83_04500 PF01814 Hemerythrin HHE cation binding domain LVJ83_04505 PF12706 Beta-lactamase superfamily domain LVJ83_04510 PF02311 AraC-like ligand binding domain LVJ83_04510 PF12833 Helix-turn-helix domain LVJ83_04515 PF00994 Probable molybdopterin binding domain LVJ83_04520 PF01048 Phosphorylase superfamily LVJ83_04525 PF00459 Inositol monophosphatase family LVJ83_04530 PF00588 SpoU rRNA Methylase family LVJ83_04540 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LVJ83_04540 PF05698 Bacterial trigger factor protein (TF) C-terminus LVJ83_04540 PF05697 Bacterial trigger factor protein (TF) LVJ83_04545 PF00574 Clp protease LVJ83_04550 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LVJ83_04565 PF01565 FAD binding domain LVJ83_04565 PF02913 FAD linked oxidases, C-terminal domain LVJ83_04570 PF01228 Glycine radical LVJ83_04570 PF02901 Pyruvate formate lyase-like LVJ83_04575 PF04055 Radical SAM superfamily LVJ83_04580 PF00075 RNase H LVJ83_04590 PF02016 LD-carboxypeptidase N-terminal domain LVJ83_04590 PF17676 LD-carboxypeptidase C-terminal domain LVJ83_04640 PF02413 Caudovirales tail fibre assembly protein, lambda gpK LVJ83_04645 PF07484 Phage Tail Collar Domain LVJ83_04755 PF00216 Bacterial DNA-binding protein LVJ83_04840 PF00717 Peptidase S24-like LVJ83_04840 PF01381 Helix-turn-helix LVJ83_04905 PF03237 Terminase-like family LVJ83_04920 PF04233 Phage Mu protein F like protein LVJ83_04960 PF13018 Extended Signal Peptide of Type V secretion system LVJ83_04960 PF13332 Hemagglutinin repeat LVJ83_04960 PF05860 haemagglutination activity domain LVJ83_04960 PF04829 Pre-toxin domain with VENN motif LVJ83_04995 PF00589 Phage integrase family LVJ83_05015 PF01521 Iron-sulphur cluster biosynthesis LVJ83_05045 PF17876 Cold shock domain LVJ83_05045 PF08206 Ribonuclease B OB domain LVJ83_05045 PF00773 RNB domain LVJ83_05045 PF00575 S1 RNA binding domain LVJ83_05045 PF08461 Ribonuclease R winged-helix domain LVJ83_05060 PF01678 Diaminopimelate epimerase LVJ83_05075 PF00291 Pyridoxal-phosphate dependent enzyme LVJ83_05095 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LVJ83_05095 PF00056 lactate/malate dehydrogenase, NAD binding domain LVJ83_05105 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LVJ83_05115 PF00890 FAD binding domain LVJ83_05115 PF02910 Fumarate reductase flavoprotein C-term LVJ83_05120 PF13085 2Fe-2S iron-sulfur cluster binding domain LVJ83_05125 PF03937 Flavinator of succinate dehydrogenase LVJ83_05130 PF00285 Citrate synthase, C-terminal domain LVJ83_05135 PF16078 2-oxoglutarate dehydrogenase N-terminus LVJ83_05135 PF00676 Dehydrogenase E1 component LVJ83_05135 PF16870 2-oxoglutarate dehydrogenase C-terminal LVJ83_05135 PF02779 Transketolase, pyrimidine binding domain LVJ83_05140 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LVJ83_05140 PF00364 Biotin-requiring enzyme LVJ83_05140 PF02817 e3 binding domain LVJ83_05150 PF07992 Pyridine nucleotide-disulphide oxidoreductase LVJ83_05150 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LVJ83_05155 PF08125 Mannitol dehydrogenase C-terminal domain LVJ83_05155 PF01232 Mannitol dehydrogenase Rossmann domain LVJ83_05160 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LVJ83_05160 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LVJ83_05165 PF07690 Major Facilitator Superfamily LVJ83_05180 PF00691 OmpA family LVJ83_05180 PF00223 Photosystem I psaA/psaB protein LVJ83_05190 PF01566 Natural resistance-associated macrophage protein LVJ83_05195 PF03746 LamB/YcsF family LVJ83_05200 PF02626 Carboxyltransferase domain, subdomain A and B LVJ83_05205 PF02682 Carboxyltransferase domain, subdomain C and D LVJ83_05215 PF06800 Sugar transport protein LVJ83_05220 PF01709 Transcriptional regulator LVJ83_05225 PF01235 Sodium:alanine symporter family LVJ83_05230 PF01451 Low molecular weight phosphotyrosine protein phosphatase LVJ83_05250 PF07549 SecD/SecF GG Motif LVJ83_05250 PF02355 Protein export membrane protein LVJ83_05255 PF02355 Protein export membrane protein LVJ83_05255 PF13721 SecD export protein N-terminal TM region LVJ83_05255 PF07549 SecD/SecF GG Motif LVJ83_05260 PF02699 Preprotein translocase subunit LVJ83_05265 PF00850 Histone deacetylase domain LVJ83_05270 PF00009 Elongation factor Tu GTP binding domain LVJ83_05270 PF03144 Elongation factor Tu domain 2 LVJ83_05270 PF16658 Class II release factor RF3, C-terminal domain LVJ83_05275 PF00004 ATPase family associated with various cellular activities (AAA) LVJ83_05275 PF16193 AAA C-terminal domain LVJ83_05275 PF12002 MgsA AAA+ ATPase C terminal LVJ83_05280 PF12464 Maltose acetyltransferase LVJ83_05280 PF00132 Bacterial transferase hexapeptide (six repeats) LVJ83_05290 PF00291 Pyridoxal-phosphate dependent enzyme LVJ83_05290 PF14821 Threonine synthase N terminus LVJ83_05295 PF00005 ABC transporter LVJ83_05295 PF00664 ABC transporter transmembrane region LVJ83_05300 PF00175 Oxidoreductase NAD-binding domain LVJ83_05300 PF00970 Oxidoreductase FAD-binding domain LVJ83_05305 PF03956 Lysine exporter LysO LVJ83_05315 PF00455 DeoR C terminal sensor domain LVJ83_05315 PF08220 DeoR-like helix-turn-helix domain LVJ83_05320 PF01042 Endoribonuclease L-PSP LVJ83_05340 PF01790 Prolipoprotein diacylglyceryl transferase LVJ83_05345 PF00920 Dehydratase family LVJ83_05355 PF00291 Pyridoxal-phosphate dependent enzyme LVJ83_05360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LVJ83_05360 PF03466 LysR substrate binding domain LVJ83_05365 PF03485 Arginyl tRNA synthetase N terminal domain LVJ83_05365 PF05746 DALR anticodon binding domain LVJ83_05365 PF00750 tRNA synthetases class I (R) LVJ83_05370 PF09997 Predicted membrane protein (DUF2238) LVJ83_05375 PF01026 TatD related DNase LVJ83_05380 PF04261 Dyp-type peroxidase family LVJ83_05385 PF00149 Calcineurin-like phosphoesterase LVJ83_05400 PF00753 Metallo-beta-lactamase superfamily LVJ83_05405 PF07690 Major Facilitator Superfamily LVJ83_05410 PF03466 LysR substrate binding domain LVJ83_05410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LVJ83_05425 PF13784 Fic/DOC family N-terminal LVJ83_05425 PF02661 Fic/DOC family LVJ83_05430 PF01047 MarR family LVJ83_05435 PF00106 short chain dehydrogenase LVJ83_05440 PF12706 Beta-lactamase superfamily domain LVJ83_05445 PF00106 short chain dehydrogenase LVJ83_05450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LVJ83_05450 PF03466 LysR substrate binding domain LVJ83_05455 PF00248 Aldo/keto reductase family LVJ83_05465 PF17946 RecC C-terminal domain LVJ83_05470 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LVJ83_05475 PF02028 BCCT, betaine/carnitine/choline family transporter LVJ83_05490 PF01063 Amino-transferase class IV LVJ83_05495 PF00815 Histidinol dehydrogenase LVJ83_05505 PF01634 ATP phosphoribosyltransferase LVJ83_05510 PF02630 SCO1/SenC LVJ83_05535 PF04002 RadC-like JAB domain LVJ83_05540 PF00202 Aminotransferase class-III LVJ83_05545 PF00293 NUDIX domain LVJ83_05550 PF16123 Hydroxyacylglutathione hydrolase C-terminus LVJ83_05550 PF00753 Metallo-beta-lactamase superfamily LVJ83_05555 PF05430 S-adenosyl-L-methionine-dependent methyltransferase LVJ83_05555 PF01266 FAD dependent oxidoreductase LVJ83_05565 PF18152 DAHP synthase ferredoxin-like domain LVJ83_05565 PF00793 DAHP synthetase I family LVJ83_05570 PF02677 Epoxyqueuosine reductase QueH LVJ83_05590 PF00586 AIR synthase related protein, N-terminal domain LVJ83_05590 PF02769 AIR synthase related protein, C-terminal domain LVJ83_05595 PF06470 SMC proteins Flexible Hinge Domain LVJ83_05595 PF02463 RecF/RecN/SMC N terminal domain LVJ83_05600 PF00691 OmpA family LVJ83_05600 PF01389 OmpA-like transmembrane domain LVJ83_05610 PF00301 Rubredoxin LVJ83_05625 PF01264 Chorismate synthase LVJ83_05640 PF01494 FAD binding domain LVJ83_05645 PF01494 FAD binding domain LVJ83_05650 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LVJ83_05650 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LVJ83_05655 PF00772 DnaB-like helicase N terminal domain LVJ83_05655 PF03796 DnaB-like helicase C terminal domain LVJ83_05695 PF06472 ABC transporter transmembrane region 2 LVJ83_05695 PF00005 ABC transporter LVJ83_05710 PF01594 AI-2E family transporter LVJ83_05715 PF17864 RuvB AAA lid domain LVJ83_05715 PF05491 RuvB C-terminal winged helix domain LVJ83_05715 PF05496 Holliday junction DNA helicase RuvB P-loop domain LVJ83_05730 PF00111 2Fe-2S iron-sulfur cluster binding domain LVJ83_05730 PF00970 Oxidoreductase FAD-binding domain LVJ83_05730 PF00175 Oxidoreductase NAD-binding domain LVJ83_05740 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LVJ83_05740 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LVJ83_05745 PF01276 Orn/Lys/Arg decarboxylase, major domain LVJ83_05745 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain LVJ83_05745 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain LVJ83_05750 PF01699 Sodium/calcium exchanger protein LVJ83_05760 PF00497 Bacterial extracellular solute-binding proteins, family 3 LVJ83_05765 PF00270 DEAD/DEAH box helicase LVJ83_05765 PF02559 CarD-like/TRCF domain LVJ83_05765 PF00271 Helicase conserved C-terminal domain LVJ83_05765 PF17757 UvrB interaction domain LVJ83_05765 PF03461 TRCF domain LVJ83_05780 PF00390 Malic enzyme, N-terminal domain LVJ83_05780 PF03949 Malic enzyme, NAD binding domain LVJ83_05785 PF00390 Malic enzyme, N-terminal domain LVJ83_05785 PF03949 Malic enzyme, NAD binding domain LVJ83_05795 PF01487 Type I 3-dehydroquinase LVJ83_05805 PF17836 PglD N-terminal domain LVJ83_05805 PF00132 Bacterial transferase hexapeptide (six repeats) LVJ83_05810 PF00528 Binding-protein-dependent transport system inner membrane component LVJ83_05815 PF08402 TOBE domain LVJ83_05815 PF00005 ABC transporter LVJ83_05820 PF01029 NusB family LVJ83_05825 PF00885 6,7-dimethyl-8-ribityllumazine synthase LVJ83_05845 PF00925 GTP cyclohydrolase II LVJ83_05845 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LVJ83_05850 PF00677 Lumazine binding domain LVJ83_05860 PF03061 Thioesterase superfamily LVJ83_05865 PF01544 CorA-like Mg2+ transporter protein LVJ83_05870 PF02541 Ppx/GppA phosphatase family LVJ83_05900 PF01156 Inosine-uridine preferring nucleoside hydrolase LVJ83_05910 PF01207 Dihydrouridine synthase (Dus) LVJ83_05915 PF00696 Amino acid kinase family LVJ83_05920 PF00202 Aminotransferase class-III LVJ83_05925 PF02146 Sir2 family LVJ83_05955 PF00580 UvrD/REP helicase N-terminal domain LVJ83_05955 PF13361 UvrD-like helicase C-terminal domain LVJ83_05955 PF12705 PD-(D/E)XK nuclease superfamily LVJ83_05960 PF00857 Isochorismatase family LVJ83_05970 PF00171 Aldehyde dehydrogenase family LVJ83_05975 PF00202 Aminotransferase class-III LVJ83_05980 PF00535 Glycosyl transferase family 2 LVJ83_05985 PF00294 pfkB family carbohydrate kinase LVJ83_05995 PF01751 Toprim domain LVJ83_05995 PF00204 DNA gyrase B LVJ83_05995 PF00986 DNA gyrase B subunit, carboxyl terminus LVJ83_05995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LVJ83_06000 PF00293 NUDIX domain LVJ83_06005 PF13416 Bacterial extracellular solute-binding protein LVJ83_06010 PF01975 Survival protein SurE LVJ83_06020 PF01476 LysM domain LVJ83_06020 PF01551 Peptidase family M23 LVJ83_06030 PF13533 Biotin-lipoyl like LVJ83_06035 PF01596 O-methyltransferase LVJ83_06040 PF13460 NAD(P)H-binding LVJ83_06045 PF00005 ABC transporter LVJ83_06075 PF00248 Aldo/keto reductase family LVJ83_06085 PF12146 Serine aminopeptidase, S33 LVJ83_06090 PF03466 LysR substrate binding domain LVJ83_06090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LVJ83_06105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LVJ83_06105 PF03466 LysR substrate binding domain LVJ83_06110 PF08659 KR domain LVJ83_06110 PF00109 Beta-ketoacyl synthase, N-terminal domain LVJ83_06110 PF02801 Beta-ketoacyl synthase, C-terminal domain LVJ83_06110 PF00550 Phosphopantetheine attachment site LVJ83_06110 PF08240 Alcohol dehydrogenase GroES-like domain LVJ83_06110 PF00107 Zinc-binding dehydrogenase LVJ83_06110 PF00698 Acyl transferase domain LVJ83_06110 PF14765 Polyketide synthase dehydratase LVJ83_06110 PF16197 Ketoacyl-synthetase C-terminal extension LVJ83_06135 PF04321 RmlD substrate binding domain LVJ83_06140 PF02566 OsmC-like protein LVJ83_06145 PF00210 Ferritin-like domain LVJ83_06150 PF07992 Pyridine nucleotide-disulphide oxidoreductase LVJ83_06150 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LVJ83_06155 PF01022 Bacterial regulatory protein, arsR family LVJ83_06160 PF03702 Anhydro-N-acetylmuramic acid kinase LVJ83_06165 PF01479 S4 domain LVJ83_06165 PF00849 RNA pseudouridylate synthase LVJ83_06170 PF03167 Uracil DNA glycosylase superfamily LVJ83_06175 PF10011 Predicted membrane protein (DUF2254) LVJ83_06185 PF02129 X-Pro dipeptidyl-peptidase (S15 family) LVJ83_06190 PF07519 Tannase and feruloyl esterase LVJ83_06200 PF00665 Integrase core domain LVJ83_06200 PF13333 Integrase core domain LVJ83_06200 PF13276 HTH-like domain LVJ83_06205 PF02129 X-Pro dipeptidyl-peptidase (S15 family) LVJ83_06215 PF05175 Methyltransferase small domain LVJ83_06225 PF01717 Cobalamin-independent synthase, Catalytic domain LVJ83_06235 PF01554 MatE LVJ83_06240 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain LVJ83_06240 PF01565 FAD binding domain LVJ83_06245 PF08359 YsiA-like protein, C-terminal region LVJ83_06245 PF00440 Bacterial regulatory proteins, tetR family LVJ83_06250 PF01568 Molydopterin dinucleotide binding domain LVJ83_06250 PF00384 Molybdopterin oxidoreductase LVJ83_06250 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LVJ83_06255 PF09163 Formate dehydrogenase N, transmembrane LVJ83_06255 PF13247 4Fe-4S dicluster domain LVJ83_06260 PF01292 Prokaryotic cytochrome b561 LVJ83_06265 PF04216 Protein involved in formate dehydrogenase formation LVJ83_06270 PF02634 FdhD/NarQ family LVJ83_06285 PF00549 CoA-ligase LVJ83_06285 PF08442 ATP-grasp domain LVJ83_06290 PF00549 CoA-ligase LVJ83_06290 PF02629 CoA binding domain LVJ83_06295 PF01208 Uroporphyrinogen decarboxylase (URO-D) LVJ83_06300 PF13396 Phospholipase_D-nuclease N-terminal LVJ83_06300 PF13091 PLD-like domain LVJ83_06315 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LVJ83_06320 PF05222 Alanine dehydrogenase/PNT, N-terminal domain LVJ83_06320 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LVJ83_06320 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch LVJ83_06325 PF02233 NAD(P) transhydrogenase beta subunit LVJ83_06330 PF00392 Bacterial regulatory proteins, gntR family LVJ83_06330 PF00155 Aminotransferase class I and II LVJ83_06335 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase LVJ83_06335 PF12801 4Fe-4S binding domain LVJ83_06335 PF13746 4Fe-4S dicluster domain LVJ83_06345 PF01497 Periplasmic binding protein LVJ83_06360 PF07715 TonB-dependent Receptor Plug Domain LVJ83_06360 PF00593 TonB dependent receptor LVJ83_06370 PF00390 Malic enzyme, N-terminal domain LVJ83_06370 PF03949 Malic enzyme, NAD binding domain LVJ83_06370 PF01515 Phosphate acetyl/butaryl transferase LVJ83_06380 PF08534 Redoxin LVJ83_06385 PF00005 ABC transporter LVJ83_06385 PF12848 ABC transporter LVJ83_06400 PF06418 CTP synthase N-terminus LVJ83_06400 PF00117 Glutamine amidotransferase class-I LVJ83_06410 PF00834 Ribulose-phosphate 3 epimerase family LVJ83_06415 PF00310 Glutamine amidotransferases class-II LVJ83_06415 PF01645 Conserved region in glutamate synthase LVJ83_06415 PF01493 GXGXG motif LVJ83_06415 PF04898 Glutamate synthase central domain LVJ83_06420 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LVJ83_06420 PF07992 Pyridine nucleotide-disulphide oxidoreductase LVJ83_06425 PF09278 MerR, DNA binding LVJ83_06425 PF00376 MerR family regulatory protein LVJ83_06430 PF01925 Sulfite exporter TauE/SafE LVJ83_06435 PF10672 S-adenosylmethionine-dependent methyltransferase LVJ83_06440 PF01145 SPFH domain / Band 7 family LVJ83_06440 PF16200 C-terminal region of band_7 LVJ83_06450 PF04384 Iron-sulphur cluster assembly LVJ83_06455 PF00111 2Fe-2S iron-sulfur cluster binding domain LVJ83_06460 PF00012 Hsp70 protein LVJ83_06480 PF02801 Beta-ketoacyl synthase, C-terminal domain LVJ83_06480 PF00109 Beta-ketoacyl synthase, N-terminal domain LVJ83_06495 PF02801 Beta-ketoacyl synthase, C-terminal domain LVJ83_06495 PF00109 Beta-ketoacyl synthase, N-terminal domain LVJ83_06505 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain LVJ83_06505 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain LVJ83_06505 PF01488 Shikimate / quinate 5-dehydrogenase LVJ83_06515 PF01243 Pyridoxamine 5'-phosphate oxidase LVJ83_06515 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region LVJ83_06520 PF08543 Phosphomethylpyrimidine kinase LVJ83_06525 PF08032 RNA 2'-O ribose methyltransferase substrate binding LVJ83_06525 PF00588 SpoU rRNA Methylase family LVJ83_06530 PF01661 Macro domain LVJ83_06535 PF02810 SEC-C motif LVJ83_06535 PF03695 Uncharacterised protein family (UPF0149) LVJ83_06545 PF01171 PP-loop family LVJ83_06550 PF02321 Outer membrane efflux protein LVJ83_06585 PF00529 HlyD membrane-fusion protein of T1SS LVJ83_06585 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LVJ83_06590 PF00664 ABC transporter transmembrane region LVJ83_06590 PF00005 ABC transporter LVJ83_06590 PF03412 Peptidase C39 family LVJ83_06595 PF02687 FtsX-like permease family LVJ83_06595 PF12704 MacB-like periplasmic core domain LVJ83_06600 PF00005 ABC transporter LVJ83_06610 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family LVJ83_06610 PF04055 Radical SAM superfamily LVJ83_06615 PF03099 Biotin/lipoate A/B protein ligase family LVJ83_06620 PF04359 Protein of unknown function (DUF493) LVJ83_06625 PF00004 ATPase family associated with various cellular activities (AAA) LVJ83_06625 PF05362 Lon protease (S16) C-terminal proteolytic domain LVJ83_06625 PF02190 ATP-dependent protease La (LON) substrate-binding domain LVJ83_06630 PF00216 Bacterial DNA-binding protein LVJ83_06635 PF05698 Bacterial trigger factor protein (TF) C-terminus LVJ83_06640 PF00009 Elongation factor Tu GTP binding domain LVJ83_06640 PF03144 Elongation factor Tu domain 2 LVJ83_06640 PF06421 GTP-binding protein LepA C-terminus LVJ83_06640 PF00679 Elongation factor G C-terminus LVJ83_06645 PF10502 Signal peptidase, peptidase S26 LVJ83_06650 PF14622 Ribonuclease-III-like LVJ83_06650 PF00035 Double-stranded RNA binding motif LVJ83_06655 PF07650 KH domain LVJ83_06655 PF01926 50S ribosome-binding GTPase LVJ83_06660 PF06962 Putative rRNA methylase LVJ83_06665 PF04247 Invasion gene expression up-regulator, SirB LVJ83_06670 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) LVJ83_06675 PF01712 Deoxynucleoside kinase LVJ83_06680 PF02548 Ketopantoate hydroxymethyltransferase LVJ83_06690 PF02569 Pantoate-beta-alanine ligase LVJ83_06695 PF01381 Helix-turn-helix LVJ83_06700 PF01758 Sodium Bile acid symporter family LVJ83_06705 PF01256 Carbohydrate kinase LVJ83_06715 PF00719 Inorganic pyrophosphatase LVJ83_06720 PF03232 Ubiquinone biosynthesis protein COQ7 LVJ83_06730 PF12848 ABC transporter LVJ83_06730 PF16326 ABC transporter C-terminal domain LVJ83_06730 PF00005 ABC transporter LVJ83_06735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LVJ83_06735 PF03466 LysR substrate binding domain LVJ83_06740 PF04341 Protein of unknown function, DUF485 LVJ83_06745 PF00474 Sodium:solute symporter family LVJ83_06760 PF02875 Mur ligase family, glutamate ligase domain LVJ83_06760 PF08245 Mur ligase middle domain LVJ83_06775 PF00156 Phosphoribosyl transferase domain LVJ83_06780 PF07715 TonB-dependent Receptor Plug Domain LVJ83_06780 PF00593 TonB dependent receptor LVJ83_06785 PF07715 TonB-dependent Receptor Plug Domain LVJ83_06785 PF07660 Secretin and TonB N terminus short domain LVJ83_06785 PF00593 TonB dependent receptor LVJ83_06790 PF00860 Permease family LVJ83_06810 PF02463 RecF/RecN/SMC N terminal domain LVJ83_06815 PF17854 FtsK alpha domain LVJ83_06815 PF09397 Ftsk gamma domain LVJ83_06815 PF01580 FtsK/SpoIIIE family LVJ83_06815 PF13491 4TM region of DNA translocase FtsK/SpoIIIE LVJ83_06840 PF01513 ATP-NAD kinase LVJ83_06845 PF01625 Peptide methionine sulfoxide reductase LVJ83_06850 PF14437 MafB19-like deaminase LVJ83_06855 PF02899 Phage integrase, N-terminal SAM-like domain LVJ83_06855 PF00589 Phage integrase family LVJ83_06860 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LVJ83_06860 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LVJ83_06875 PF00578 AhpC/TSA family LVJ83_06880 PF07662 Na+ dependent nucleoside transporter C-terminus LVJ83_06880 PF01773 Na+ dependent nucleoside transporter N-terminus LVJ83_06880 PF07670 Nucleoside recognition LVJ83_06885 PF01218 Coproporphyrinogen III oxidase LVJ83_06900 PF00550 Phosphopantetheine attachment site LVJ83_06905 PF00550 Phosphopantetheine attachment site LVJ83_06940 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LVJ83_06940 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LVJ83_06945 PF00667 FAD binding domain LVJ83_06945 PF00175 Oxidoreductase NAD-binding domain LVJ83_06945 PF00258 Flavodoxin LVJ83_06965 PF00464 Serine hydroxymethyltransferase LVJ83_06975 PF00881 Nitroreductase family LVJ83_06980 PF04325 Protein of unknown function (DUF465) LVJ83_06995 PF00009 Elongation factor Tu GTP binding domain LVJ83_07010 PF00462 Glutaredoxin LVJ83_07015 PF01189 16S rRNA methyltransferase RsmB/F LVJ83_07015 PF01029 NusB family LVJ83_07025 PF00551 Formyl transferase LVJ83_07030 PF01810 LysE type translocator LVJ83_07035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LVJ83_07035 PF03466 LysR substrate binding domain LVJ83_07040 PF01228 Glycine radical LVJ83_07045 PF00194 Eukaryotic-type carbonic anhydrase LVJ83_07050 PF05860 haemagglutination activity domain LVJ83_07050 PF04829 Pre-toxin domain with VENN motif LVJ83_07050 PF13332 Hemagglutinin repeat LVJ83_07050 PF13018 Extended Signal Peptide of Type V secretion system LVJ83_07075 PF14449 Pre-toxin TG LVJ83_07075 PF04740 LXG domain of WXG superfamily LVJ83_07115 PF13018 Extended Signal Peptide of Type V secretion system LVJ83_07115 PF13332 Hemagglutinin repeat LVJ83_07115 PF04829 Pre-toxin domain with VENN motif LVJ83_07115 PF05860 haemagglutination activity domain LVJ83_07115 PF13332 Hemagglutinin repeat LVJ83_07115 PF13018 Extended Signal Peptide of Type V secretion system LVJ83_07115 PF04829 Pre-toxin domain with VENN motif LVJ83_07115 PF05860 haemagglutination activity domain LVJ83_07120 PF08479 POTRA domain, ShlB-type LVJ83_07120 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB LVJ83_07120 PF17287 POTRA domain LVJ83_07125 PF04228 Putative neutral zinc metallopeptidase LVJ83_07130 PF01479 S4 domain LVJ83_07135 PF00593 TonB dependent receptor LVJ83_07135 PF07715 TonB-dependent Receptor Plug Domain LVJ83_07145 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit LVJ83_07150 PF09179 TilS substrate binding domain LVJ83_07150 PF01171 PP-loop family LVJ83_07155 PF04542 Sigma-70 region 2 LVJ83_07155 PF08281 Sigma-70, region 4 LVJ83_07170 PF00403 Heavy-metal-associated domain LVJ83_07175 PF00403 Heavy-metal-associated domain LVJ83_07180 PF01966 HD domain LVJ83_07180 PF08335 GlnD PII-uridylyltransferase LVJ83_07185 PF07690 Major Facilitator Superfamily LVJ83_07195 PF01571 Aminomethyltransferase folate-binding domain LVJ83_07200 PF01494 FAD binding domain LVJ83_07205 PF01966 HD domain LVJ83_07205 PF01743 Poly A polymerase head domain LVJ83_07205 PF12627 Probable RNA and SrmB- binding site of polymerase A LVJ83_07210 PF02861 Clp amino terminal domain, pathogenicity island component LVJ83_07210 PF10431 C-terminal, D2-small domain, of ClpB protein LVJ83_07210 PF07724 AAA domain (Cdc48 subfamily) LVJ83_07210 PF00004 ATPase family associated with various cellular activities (AAA) LVJ83_07210 PF17871 AAA lid domain LVJ83_07215 PF00579 tRNA synthetases class I (W and Y) LVJ83_07220 PF03471 Transporter associated domain LVJ83_07220 PF01595 Cyclin M transmembrane N-terminal domain LVJ83_07220 PF00571 CBS domain LVJ83_07225 PF04127 DNA / pantothenate metabolism flavoprotein LVJ83_07225 PF02441 Flavoprotein LVJ83_07230 PF00128 Alpha amylase, catalytic domain LVJ83_07235 PF02592 Putative vitamin uptake transporter LVJ83_07240 PF14489 QueF-like protein LVJ83_07250 PF02321 Outer membrane efflux protein LVJ83_07255 PF13533 Biotin-lipoyl like LVJ83_07260 PF07690 Major Facilitator Superfamily LVJ83_07265 PF00692 dUTPase LVJ83_07275 PF01032 FecCD transport family LVJ83_07280 PF01497 Periplasmic binding protein LVJ83_07285 PF00005 ABC transporter LVJ83_07300 PF07690 Major Facilitator Superfamily LVJ83_07315 PF00437 Type II/IV secretion system protein LVJ83_07320 PF01048 Phosphorylase superfamily LVJ83_07330 PF01226 Formate/nitrite transporter LVJ83_07335 PF03605 Anaerobic c4-dicarboxylate membrane transporter LVJ83_07340 PF00293 NUDIX domain LVJ83_07345 PF12794 Mechanosensitive ion channel inner membrane domain 1 LVJ83_07345 PF12795 Mechanosensitive ion channel porin domain LVJ83_07345 PF00924 Mechanosensitive ion channel LVJ83_07350 PF01507 Phosphoadenosine phosphosulfate reductase family LVJ83_07360 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LVJ83_07360 PF14824 Sirohaem biosynthesis protein central LVJ83_07360 PF10414 Sirohaem synthase dimerisation region LVJ83_07365 PF17760 UvrA interaction domain LVJ83_07365 PF17755 UvrA DNA-binding domain LVJ83_07375 PF02665 Nitrate reductase gamma subunit LVJ83_07380 PF02613 Nitrate reductase delta subunit LVJ83_07385 PF14711 Respiratory nitrate reductase beta C-terminal LVJ83_07385 PF13247 4Fe-4S dicluster domain LVJ83_07390 PF01568 Molydopterin dinucleotide binding domain LVJ83_07390 PF00384 Molybdopterin oxidoreductase LVJ83_07390 PF14710 Respiratory nitrate reductase alpha N-terminal LVJ83_07395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LVJ83_07395 PF03459 TOBE domain LVJ83_07400 PF02581 Thiamine monophosphate synthase LVJ83_07405 PF00196 Bacterial regulatory proteins, luxR family LVJ83_07405 PF00072 Response regulator receiver domain LVJ83_07410 PF00672 HAMP domain LVJ83_07410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LVJ83_07410 PF07730 Histidine kinase LVJ83_07410 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term LVJ83_07420 PF02391 MoaE protein LVJ83_07425 PF12804 MobA-like NTP transferase domain LVJ83_07430 PF00994 Probable molybdopterin binding domain LVJ83_07430 PF03453 MoeA N-terminal region (domain I and II) LVJ83_07430 PF03454 MoeA C-terminal region (domain IV) LVJ83_07435 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LVJ83_07435 PF07992 Pyridine nucleotide-disulphide oxidoreductase LVJ83_07435 PF13806 Rieske-like [2Fe-2S] domain LVJ83_07435 PF18267 Rubredoxin NAD+ reductase C-terminal domain LVJ83_07435 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LVJ83_07435 PF04324 BFD-like [2Fe-2S] binding domain LVJ83_07440 PF04324 BFD-like [2Fe-2S] binding domain LVJ83_07440 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LVJ83_07440 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LVJ83_07440 PF07992 Pyridine nucleotide-disulphide oxidoreductase LVJ83_07440 PF18267 Rubredoxin NAD+ reductase C-terminal domain LVJ83_07460 PF00497 Bacterial extracellular solute-binding proteins, family 3 LVJ83_07465 PF00155 Aminotransferase class I and II LVJ83_07470 PF06865 Pyrimidine/purine nucleoside phosphorylase LVJ83_07475 PF00210 Ferritin-like domain LVJ83_07480 PF00210 Ferritin-like domain LVJ83_07485 PF00679 Elongation factor G C-terminus LVJ83_07485 PF03144 Elongation factor Tu domain 2 LVJ83_07485 PF00009 Elongation factor Tu GTP binding domain LVJ83_07495 PF07992 Pyridine nucleotide-disulphide oxidoreductase LVJ83_07500 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LVJ83_07505 PF00543 Nitrogen regulatory protein P-II LVJ83_07510 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain LVJ83_07510 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal LVJ83_07510 PF02769 AIR synthase related protein, C-terminal domain LVJ83_07515 PF02678 Pirin LVJ83_07515 PF05726 Pirin C-terminal cupin domain LVJ83_07525 PF00248 Aldo/keto reductase family LVJ83_07535 PF14698 Argininosuccinate lyase C-terminal LVJ83_07535 PF00206 Lyase LVJ83_07540 PF06580 Histidine kinase LVJ83_07540 PF07694 5TMR of 5TMR-LYT LVJ83_07540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LVJ83_07565 PF00111 2Fe-2S iron-sulfur cluster binding domain LVJ83_07570 PF00268 Ribonucleotide reductase, small chain LVJ83_07575 PF03477 ATP cone domain LVJ83_07575 PF02867 Ribonucleotide reductase, barrel domain LVJ83_07575 PF00317 Ribonucleotide reductase, all-alpha domain LVJ83_07580 PF17209 Hfq protein LVJ83_07585 PF01926 50S ribosome-binding GTPase LVJ83_07585 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal LVJ83_07590 PF09976 Tetratricopeptide repeat-like domain LVJ83_07595 PF13393 Histidyl-tRNA synthetase LVJ83_07595 PF03129 Anticodon binding domain LVJ83_07600 PF04551 GcpE protein LVJ83_07615 PF04055 Radical SAM superfamily LVJ83_07620 PF00334 Nucleoside diphosphate kinase LVJ83_07625 PF03969 AFG1-like ATPase LVJ83_07630 PF00216 Bacterial DNA-binding protein LVJ83_07635 PF00575 S1 RNA binding domain LVJ83_07640 PF02224 Cytidylate kinase LVJ83_07645 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LVJ83_07650 PF03372 Endonuclease/Exonuclease/phosphatase family LVJ83_07660 PF00117 Glutamine amidotransferase class-I LVJ83_07665 PF00591 Glycosyl transferase family, a/b domain LVJ83_07665 PF02885 Glycosyl transferase family, helical bundle domain LVJ83_07670 PF02261 Aspartate decarboxylase LVJ83_07685 PF00308 Bacterial dnaA protein LVJ83_07690 PF09335 SNARE associated Golgi protein LVJ83_07695 PF14602 Hexapeptide repeat of succinyl-transferase LVJ83_07695 PF12464 Maltose acetyltransferase LVJ83_07695 PF00132 Bacterial transferase hexapeptide (six repeats) LVJ83_07700 PF03989 DNA gyrase C-terminal domain, beta-propeller LVJ83_07700 PF00521 DNA gyrase/topoisomerase IV, subunit A LVJ83_07710 PF09285 Elongation factor P, C-terminal LVJ83_07710 PF08207 Elongation factor P (EF-P) KOW-like domain LVJ83_07710 PF01132 Elongation factor P (EF-P) OB domain LVJ83_07715 PF13193 AMP-binding enzyme C-terminal domain LVJ83_07715 PF00501 AMP-binding enzyme LVJ83_07720 PF13662 Toprim domain LVJ83_07720 PF02132 RecR protein LVJ83_07725 PF02575 YbaB/EbfC DNA-binding family LVJ83_07730 PF12169 DNA polymerase III subunits gamma and tau domain III LVJ83_07730 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding LVJ83_07730 PF12170 DNA polymerase III tau subunit V interacting with alpha LVJ83_07735 PF13406 Transglycosylase SLT domain LVJ83_07740 PF01281 Ribosomal protein L9, N-terminal domain LVJ83_07740 PF03948 Ribosomal protein L9, C-terminal domain LVJ83_07745 PF01084 Ribosomal protein S18 LVJ83_07755 PF01250 Ribosomal protein S6 LVJ83_07760 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LVJ83_07760 PF07992 Pyridine nucleotide-disulphide oxidoreductase LVJ83_07765 PF02817 e3 binding domain LVJ83_07765 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LVJ83_07765 PF00364 Biotin-requiring enzyme LVJ83_07770 PF00456 Transketolase, thiamine diphosphate binding domain LVJ83_07770 PF17831 Pyruvate dehydrogenase E1 component middle domain LVJ83_07785 PF00561 alpha/beta hydrolase fold LVJ83_07785 PF07021 Methionine biosynthesis protein MetW LVJ83_07790 PF00561 alpha/beta hydrolase fold LVJ83_07805 PF01842 ACT domain LVJ83_07805 PF00742 Homoserine dehydrogenase LVJ83_07805 PF03447 Homoserine dehydrogenase, NAD binding domain LVJ83_07810 PF04430 Protein of unknown function (DUF498/DUF598) LVJ83_07815 PF13276 HTH-like domain LVJ83_07815 PF00665 Integrase core domain LVJ83_07815 PF13333 Integrase core domain LVJ83_07830 PF03466 LysR substrate binding domain LVJ83_07830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LVJ83_07850 PF03781 Sulfatase-modifying factor enzyme 1 LVJ83_07870 PF07690 Major Facilitator Superfamily LVJ83_07875 PF14850 DNA-binding domain of Proline dehydrogenase LVJ83_07875 PF01619 Proline dehydrogenase LVJ83_07875 PF00171 Aldehyde dehydrogenase family LVJ83_07875 PF18327 Proline utilization A proline dehydrogenase N-terminal domain LVJ83_07880 PF02423 Ornithine cyclodeaminase/mu-crystallin family LVJ83_07890 PF00083 Sugar (and other) transporter LVJ83_07890 PF07690 Major Facilitator Superfamily LVJ83_07895 PF07690 Major Facilitator Superfamily LVJ83_07900 PF03976 Polyphosphate kinase 2 (PPK2) LVJ83_07905 PF13091 PLD-like domain LVJ83_07910 PF00877 NlpC/P60 family LVJ83_07915 PF00871 Acetokinase family LVJ83_07920 PF07690 Major Facilitator Superfamily LVJ83_07925 PF03466 LysR substrate binding domain LVJ83_07925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LVJ83_07930 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LVJ83_07930 PF13378 Enolase C-terminal domain-like LVJ83_07935 PF02426 Muconolactone delta-isomerase LVJ83_07940 PF04444 Catechol dioxygenase N terminus LVJ83_07940 PF00775 Dioxygenase LVJ83_07945 PF00355 Rieske [2Fe-2S] domain LVJ83_07945 PF00848 Ring hydroxylating alpha subunit (catalytic domain) LVJ83_07950 PF00866 Ring hydroxylating beta subunit LVJ83_07955 PF00111 2Fe-2S iron-sulfur cluster binding domain LVJ83_07955 PF00175 Oxidoreductase NAD-binding domain LVJ83_07955 PF00970 Oxidoreductase FAD-binding domain LVJ83_07960 PF00106 short chain dehydrogenase LVJ83_07965 PF03594 Benzoate membrane transport protein LVJ83_07975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LVJ83_07975 PF03466 LysR substrate binding domain LVJ83_07980 PF02667 Short chain fatty acid transporter LVJ83_07985 PF01144 Coenzyme A transferase LVJ83_07990 PF01144 Coenzyme A transferase LVJ83_07995 PF00108 Thiolase, N-terminal domain LVJ83_07995 PF02803 Thiolase, C-terminal domain LVJ83_08000 PF12146 Serine aminopeptidase, S33 LVJ83_08005 PF07859 alpha/beta hydrolase fold LVJ83_08010 PF00107 Zinc-binding dehydrogenase LVJ83_08010 PF08240 Alcohol dehydrogenase GroES-like domain LVJ83_08015 PF04237 YjbR LVJ83_08020 PF12706 Beta-lactamase superfamily domain LVJ83_08025 PF00581 Rhodanese-like domain LVJ83_08030 PF01209 ubiE/COQ5 methyltransferase family LVJ83_08050 PF02540 NAD synthase LVJ83_08070 PF01814 Hemerythrin HHE cation binding domain LVJ83_08085 PF00474 Sodium:solute symporter family LVJ83_08095 PF00005 ABC transporter LVJ83_08100 PF04305 Protein of unknown function (DUF455) LVJ83_08105 PF03548 Outer membrane lipoprotein carrier protein LolA LVJ83_08115 PF04314 Copper chaperone PCu(A)C LVJ83_08120 PF01219 Prokaryotic diacylglycerol kinase LVJ83_08125 PF01219 Prokaryotic diacylglycerol kinase LVJ83_08130 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain LVJ83_08130 PF02951 Prokaryotic glutathione synthetase, N-terminal domain LVJ83_08145 PF00216 Bacterial DNA-binding protein LVJ83_08150 PF03483 B3/4 domain LVJ83_08150 PF03484 tRNA synthetase B5 domain LVJ83_08150 PF03147 Ferredoxin-fold anticodon binding domain LVJ83_08150 PF01588 Putative tRNA binding domain LVJ83_08150 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain LVJ83_08155 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain LVJ83_08155 PF01409 tRNA synthetases class II core domain (F) LVJ83_08160 PF00453 Ribosomal protein L20 LVJ83_08165 PF01632 Ribosomal protein L35 LVJ83_08170 PF00707 Translation initiation factor IF-3, C-terminal domain LVJ83_08170 PF05198 Translation initiation factor IF-3, N-terminal domain LVJ83_08175 PF03129 Anticodon binding domain LVJ83_08175 PF02824 TGS domain LVJ83_08175 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LVJ83_08175 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LVJ83_08180 PF01702 Queuine tRNA-ribosyltransferase LVJ83_08190 PF00593 TonB dependent receptor LVJ83_08190 PF07715 TonB-dependent Receptor Plug Domain LVJ83_08195 PF00356 Bacterial regulatory proteins, lacI family LVJ83_08195 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LVJ83_08210 PF00171 Aldehyde dehydrogenase family LVJ83_08225 PF01966 HD domain LVJ83_08230 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LVJ83_08230 PF07497 Rho termination factor, RNA-binding domain LVJ83_08230 PF07498 Rho termination factor, N-terminal domain LVJ83_08235 PF10544 T5orf172 domain LVJ83_08255 PF00749 tRNA synthetases class I (E and Q), catalytic domain LVJ83_08255 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain LVJ83_08260 PF00497 Bacterial extracellular solute-binding proteins, family 3 LVJ83_08265 PF11798 IMS family HHH motif LVJ83_08265 PF11799 impB/mucB/samB family C-terminal domain LVJ83_08265 PF00817 impB/mucB/samB family LVJ83_08270 PF05958 tRNA (Uracil-5-)-methyltransferase LVJ83_08280 PF01226 Formate/nitrite transporter LVJ83_08285 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain LVJ83_08285 PF00391 PEP-utilising enzyme, mobile domain LVJ83_08285 PF02896 PEP-utilising enzyme, TIM barrel domain LVJ83_08290 PF03618 Kinase/pyrophosphorylase LVJ83_08300 PF02698 DUF218 domain LVJ83_08310 PF02322 Cytochrome bd terminal oxidase subunit II LVJ83_08315 PF01654 Cytochrome bd terminal oxidase subunit I LVJ83_08320 PF00664 ABC transporter transmembrane region LVJ83_08320 PF00005 ABC transporter LVJ83_08325 PF00664 ABC transporter transmembrane region LVJ83_08325 PF00005 ABC transporter LVJ83_08330 PF01810 LysE type translocator LVJ83_08335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LVJ83_08335 PF03466 LysR substrate binding domain LVJ83_08340 PF00756 Putative esterase LVJ83_08345 PF13333 Integrase core domain LVJ83_08345 PF00665 Integrase core domain LVJ83_08345 PF13276 HTH-like domain LVJ83_08370 PF00528 Binding-protein-dependent transport system inner membrane component LVJ83_08375 PF08402 TOBE domain LVJ83_08375 PF00005 ABC transporter LVJ83_08385 PF01545 Cation efflux family LVJ83_08385 PF16916 Dimerisation domain of Zinc Transporter LVJ83_08390 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LVJ83_08390 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LVJ83_08390 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LVJ83_08390 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LVJ83_08395 PF00248 Aldo/keto reductase family LVJ83_08400 PF00580 UvrD/REP helicase N-terminal domain LVJ83_08400 PF13361 UvrD-like helicase C-terminal domain LVJ83_08405 PF00271 Helicase conserved C-terminal domain LVJ83_08405 PF17757 UvrB interaction domain LVJ83_08405 PF04851 Type III restriction enzyme, res subunit LVJ83_08405 PF02151 UvrB/uvrC motif LVJ83_08405 PF12344 Ultra-violet resistance protein B LVJ83_08410 PF00230 Major intrinsic protein LVJ83_08430 PF18027 Cytosolic carboxypeptidase N-terminal domain LVJ83_08430 PF00246 Zinc carboxypeptidase LVJ83_08440 PF01580 FtsK/SpoIIIE family LVJ83_08440 PF09397 Ftsk gamma domain LVJ83_08440 PF17854 FtsK alpha domain LVJ83_08450 PF02537 CrcB-like protein, Camphor Resistance (CrcB) LVJ83_08455 PF01256 Carbohydrate kinase LVJ83_08455 PF03853 YjeF-related protein N-terminus LVJ83_08460 PF02152 Dihydroneopterin aldolase LVJ83_08465 PF02660 Glycerol-3-phosphate acyltransferase LVJ83_08480 PF00085 Thioredoxin LVJ83_08485 PF00005 ABC transporter LVJ83_08485 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LVJ83_08490 PF00528 Binding-protein-dependent transport system inner membrane component LVJ83_08490 PF12911 N-terminal TM domain of oligopeptide transport permease C LVJ83_08495 PF00528 Binding-protein-dependent transport system inner membrane component LVJ83_08505 PF01053 Cys/Met metabolism PLP-dependent enzyme LVJ83_08510 PF06078 Bacterial protein of unknown function (DUF937) LVJ83_08515 PF03652 Holliday junction resolvase LVJ83_08520 PF02622 Uncharacterized ACR, COG1678 LVJ83_08525 PF01551 Peptidase family M23 LVJ83_08530 PF03572 Peptidase family S41 LVJ83_08530 PF13180 PDZ domain LVJ83_08545 PF00107 Zinc-binding dehydrogenase LVJ83_08545 PF08240 Alcohol dehydrogenase GroES-like domain LVJ83_08550 PF02403 Seryl-tRNA synthetase N-terminal domain LVJ83_08550 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LVJ83_08565 PF02272 DHHA1 domain LVJ83_08565 PF01411 tRNA synthetases class II (A) LVJ83_08565 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LVJ83_08570 PF13416 Bacterial extracellular solute-binding protein LVJ83_08575 PF02080 TrkA-C domain LVJ83_08575 PF02254 TrkA-N domain LVJ83_08580 PF05683 Fumarase C-terminus LVJ83_08580 PF05681 Fumarate hydratase (Fumerase) LVJ83_08585 PF00939 Sodium:sulfate symporter transmembrane region LVJ83_08590 PF10531 SLBB domain LVJ83_08590 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region LVJ83_08590 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit LVJ83_08595 PF02910 Fumarate reductase flavoprotein C-term LVJ83_08595 PF00890 FAD binding domain LVJ83_08605 PF05681 Fumarate hydratase (Fumerase) LVJ83_08605 PF05683 Fumarase C-terminus LVJ83_08615 PF01435 Peptidase family M48 LVJ83_08630 PF00155 Aminotransferase class I and II LVJ83_08635 PF08241 Methyltransferase domain LVJ83_08650 PF10670 Domain of unknown function (DUF4198) LVJ83_08655 PF10670 Domain of unknown function (DUF4198) LVJ83_08660 PF02390 Putative methyltransferase LVJ83_08665 PF01119 DNA mismatch repair protein, C-terminal domain LVJ83_08665 PF08676 MutL C terminal dimerisation domain LVJ83_08700 PF00291 Pyridoxal-phosphate dependent enzyme LVJ83_08700 PF00585 C-terminal regulatory domain of Threonine dehydratase LVJ83_08705 PF00768 D-alanyl-D-alanine carboxypeptidase LVJ83_08705 PF07943 Penicillin-binding protein 5, C-terminal domain LVJ83_08710 PF12627 Probable RNA and SrmB- binding site of polymerase A LVJ83_08710 PF12626 Polymerase A arginine-rich C-terminus LVJ83_08710 PF01743 Poly A polymerase head domain LVJ83_08730 PF00731 AIR carboxylase LVJ83_08750 PF03883 Peroxide stress protein YaaA LVJ83_08765 PF00583 Acetyltransferase (GNAT) family LVJ83_08775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LVJ83_08775 PF03466 LysR substrate binding domain LVJ83_08785 PF02525 Flavodoxin-like fold LVJ83_08800 PF00248 Aldo/keto reductase family LVJ83_08810 PF00248 Aldo/keto reductase family LVJ83_08820 PF08240 Alcohol dehydrogenase GroES-like domain LVJ83_08820 PF00107 Zinc-binding dehydrogenase LVJ83_08825 PF12833 Helix-turn-helix domain LVJ83_08825 PF06719 AraC-type transcriptional regulator N-terminus LVJ83_08870 PF00501 AMP-binding enzyme LVJ83_08870 PF13193 AMP-binding enzyme C-terminal domain LVJ83_08875 PF00709 Adenylosuccinate synthetase LVJ83_08880 PF13393 Histidyl-tRNA synthetase LVJ83_08885 PF01070 FMN-dependent dehydrogenase LVJ83_08890 PF02082 Transcriptional regulator LVJ83_08895 PF00266 Aminotransferase class-V LVJ83_08900 PF01592 NifU-like N terminal domain LVJ83_08905 PF01258 Prokaryotic dksA/traR C4-type zinc finger LVJ83_08915 PF01521 Iron-sulphur cluster biosynthesis LVJ83_08925 PF00226 DnaJ domain LVJ83_08925 PF07743 HSCB C-terminal oligomerisation domain LVJ83_08930 PF04820 Tryptophan halogenase LVJ83_08945 PF00528 Binding-protein-dependent transport system inner membrane component LVJ83_08950 PF00528 Binding-protein-dependent transport system inner membrane component LVJ83_08955 PF00005 ABC transporter LVJ83_08960 PF00939 Sodium:sulfate symporter transmembrane region LVJ83_08965 PF02441 Flavoprotein LVJ83_08975 PF13419 Haloacid dehalogenase-like hydrolase LVJ83_09005 PF16916 Dimerisation domain of Zinc Transporter LVJ83_09005 PF01545 Cation efflux family LVJ83_09010 PF01022 Bacterial regulatory protein, arsR family LVJ83_09015 PF00108 Thiolase, N-terminal domain LVJ83_09015 PF02803 Thiolase, C-terminal domain LVJ83_09020 PF00330 Aconitase family (aconitate hydratase) LVJ83_09035 PF00694 Aconitase C-terminal domain LVJ83_09050 PF00180 Isocitrate/isopropylmalate dehydrogenase LVJ83_09060 PF04403 Paraquat-inducible protein A LVJ83_09065 PF02470 MlaD protein LVJ83_09085 PF11490 DNA polymerase III polC-type N-terminus II LVJ83_09085 PF07733 Bacterial DNA polymerase III alpha NTPase domain LVJ83_09085 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LVJ83_09085 PF14579 Helix-hairpin-helix motif LVJ83_09085 PF00929 Exonuclease LVJ83_09085 PF02811 PHP domain LVJ83_09095 PF07690 Major Facilitator Superfamily LVJ83_09100 PF07690 Major Facilitator Superfamily LVJ83_09105 PF01507 Phosphoadenosine phosphosulfate reductase family LVJ83_09115 PF03462 PCRF domain LVJ83_09115 PF00472 RF-1 domain LVJ83_09120 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LVJ83_09125 PF00296 Luciferase-like monooxygenase LVJ83_09135 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LVJ83_09135 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LVJ83_09140 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ LVJ83_09150 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain LVJ83_09155 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LVJ83_09170 PF00474 Sodium:solute symporter family LVJ83_09175 PF04306 Protein of unknown function (DUF456) LVJ83_09185 PF01476 LysM domain LVJ83_09185 PF01464 Transglycosylase SLT domain LVJ83_09185 PF01476 LysM domain LVJ83_09185 PF01464 Transglycosylase SLT domain LVJ83_09195 PF00497 Bacterial extracellular solute-binding proteins, family 3 LVJ83_09200 PF02463 RecF/RecN/SMC N terminal domain LVJ83_09210 PF13333 Integrase core domain LVJ83_09210 PF00665 Integrase core domain LVJ83_09210 PF13276 HTH-like domain LVJ83_09235 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase LVJ83_09240 PF02602 Uroporphyrinogen-III synthase HemD LVJ83_09245 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain LVJ83_09245 PF03900 Porphobilinogen deaminase, C-terminal domain LVJ83_09250 PF02082 Transcriptional regulator LVJ83_09265 PF01118 Semialdehyde dehydrogenase, NAD binding domain LVJ83_09265 PF02774 Semialdehyde dehydrogenase, dimerisation domain LVJ83_09270 PF00561 alpha/beta hydrolase fold LVJ83_09275 PF17871 AAA lid domain LVJ83_09275 PF00004 ATPase family associated with various cellular activities (AAA) LVJ83_09275 PF10431 C-terminal, D2-small domain, of ClpB protein LVJ83_09275 PF07724 AAA domain (Cdc48 subfamily) LVJ83_09275 PF02861 Clp amino terminal domain, pathogenicity island component LVJ83_09280 PF02617 ATP-dependent Clp protease adaptor protein ClpS LVJ83_09285 PF00313 'Cold-shock' DNA-binding domain LVJ83_09295 PF01668 SmpB protein LVJ83_09310 PF00117 Glutamine amidotransferase class-I LVJ83_09310 PF00958 GMP synthase C terminal domain LVJ83_09310 PF02540 NAD synthase LVJ83_09315 PF13356 Arm DNA-binding domain LVJ83_09315 PF14659 Phage integrase, N-terminal SAM-like domain LVJ83_09315 PF00589 Phage integrase family LVJ83_09320 PF00589 Phage integrase family LVJ83_09340 PF07927 HicA toxin of bacterial toxin-antitoxin, LVJ83_09350 PF05069 Phage virion morphogenesis family LVJ83_09360 PF06074 Protein of unknown function (DUF935) LVJ83_09435 PF00849 RNA pseudouridylate synthase LVJ83_09440 PF00180 Isocitrate/isopropylmalate dehydrogenase LVJ83_09460 PF00149 Calcineurin-like phosphoesterase LVJ83_09465 PF03960 ArsC family LVJ83_09480 PF13538 UvrD-like helicase C-terminal domain LVJ83_09485 PF00154 recA bacterial DNA recombination protein LVJ83_09490 PF04715 Anthranilate synthase component I, N terminal region LVJ83_09490 PF00425 chorismate binding enzyme LVJ83_09495 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain LVJ83_09495 PF02222 ATP-grasp domain LVJ83_09500 PF02223 Thymidylate kinase LVJ83_09505 PF09115 DNA polymerase III, delta subunit, C terminal LVJ83_09515 PF01026 TatD related DNase LVJ83_09520 PF03099 Biotin/lipoate A/B protein ligase family LVJ83_09520 PF12706 Beta-lactamase superfamily domain LVJ83_09535 PF04972 BON domain LVJ83_09535 PF01476 LysM domain LVJ83_09545 PF01925 Sulfite exporter TauE/SafE LVJ83_09555 PF01066 CDP-alcohol phosphatidyltransferase LVJ83_09560 PF00171 Aldehyde dehydrogenase family LVJ83_09565 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain LVJ83_09565 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain LVJ83_09575 PF10369 Small subunit of acetolactate synthase LVJ83_09580 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LVJ83_09580 PF00205 Thiamine pyrophosphate enzyme, central domain LVJ83_09580 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LVJ83_09595 PF02926 THUMP domain LVJ83_09595 PF01170 Putative RNA methylase family UPF0020 LVJ83_09600 PF01022 Bacterial regulatory protein, arsR family LVJ83_09605 PF04977 Septum formation initiator LVJ83_09610 PF00113 Enolase, C-terminal TIM barrel domain LVJ83_09610 PF03952 Enolase, N-terminal domain LVJ83_09615 PF00571 CBS domain LVJ83_09615 PF00478 IMP dehydrogenase / GMP reductase domain LVJ83_09625 PF01799 [2Fe-2S] binding domain LVJ83_09625 PF00111 2Fe-2S iron-sulfur cluster binding domain LVJ83_09630 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain LVJ83_09630 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase LVJ83_09640 PF01979 Amidohydrolase family LVJ83_09645 PF01541 GIY-YIG catalytic domain LVJ83_09645 PF02151 UvrB/uvrC motif LVJ83_09645 PF08459 UvrC Helix-hairpin-helix N-terminal LVJ83_09670 PF01867 CRISPR associated protein Cas1 LVJ83_09710 PF03787 RAMP superfamily LVJ83_09720 PF18211 Csm1 subunit domain B LVJ83_09720 PF01966 HD domain LVJ83_09725 PF01066 CDP-alcohol phosphatidyltransferase LVJ83_09755 PF00589 Phage integrase family LVJ83_09770 PF18073 Rubredoxin metal binding domain LVJ83_09775 PF03772 Competence protein LVJ83_09775 PF00753 Metallo-beta-lactamase superfamily LVJ83_09780 PF00588 SpoU rRNA Methylase family LVJ83_09780 PF08032 RNA 2'-O ribose methyltransferase substrate binding LVJ83_09785 PF00535 Glycosyl transferase family 2 LVJ83_09810 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system LVJ83_09825 PF08240 Alcohol dehydrogenase GroES-like domain LVJ83_09825 PF00107 Zinc-binding dehydrogenase LVJ83_09830 PF01259 SAICAR synthetase LVJ83_09860 PF00209 Sodium:neurotransmitter symporter family LVJ83_09875 PF07085 DRTGG domain LVJ83_09875 PF01515 Phosphate acetyl/butaryl transferase LVJ83_09885 PF06965 Na+/H+ antiporter 1 LVJ83_09890 PF05872 Bacterial protein of unknown function (DUF853) LVJ83_09895 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LVJ83_09905 PF00186 Dihydrofolate reductase LVJ83_09910 PF02401 LytB protein LVJ83_09915 PF01252 Signal peptidase (SPase) II LVJ83_09920 PF08264 Anticodon-binding domain of tRNA LVJ83_09920 PF00133 tRNA synthetases class I (I, L, M and V) LVJ83_09920 PF06827 Zinc finger found in FPG and IleRS LVJ83_09925 PF06574 FAD synthetase LVJ83_09925 PF01687 Riboflavin kinase LVJ83_09930 PF00528 Binding-protein-dependent transport system inner membrane component LVJ83_09935 PF02321 Outer membrane efflux protein LVJ83_09940 PF12704 MacB-like periplasmic core domain LVJ83_09940 PF02687 FtsX-like permease family LVJ83_09940 PF00005 ABC transporter LVJ83_09945 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LVJ83_09955 PF07963 Prokaryotic N-terminal methylation motif LVJ83_09955 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor LVJ83_09960 PF00892 EamA-like transporter family LVJ83_09965 PF04115 Ureidoglycolate lyase LVJ83_09975 PF03561 Allantoicase repeat LVJ83_09985 PF09349 OHCU decarboxylase LVJ83_09985 PF01014 Uricase LVJ83_09995 PF00576 HIUase/Transthyretin family LVJ83_10015 PF00005 ABC transporter LVJ83_10015 PF08402 TOBE domain LVJ83_10020 PF00106 short chain dehydrogenase LVJ83_10025 PF02545 Maf-like protein LVJ83_10030 PF00575 S1 RNA binding domain LVJ83_10030 PF10150 Ribonuclease E/G family LVJ83_10035 PF01274 Malate synthase LVJ83_10040 PF02754 Cysteine-rich domain LVJ83_10040 PF13183 4Fe-4S dicluster domain LVJ83_10045 PF01565 FAD binding domain LVJ83_10050 PF05675 Protein of unknown function (DUF817) LVJ83_10055 PF02913 FAD linked oxidases, C-terminal domain LVJ83_10055 PF01565 FAD binding domain LVJ83_10060 PF02779 Transketolase, pyrimidine binding domain LVJ83_10060 PF02780 Transketolase, C-terminal domain LVJ83_10060 PF00456 Transketolase, thiamine diphosphate binding domain LVJ83_10090 PF03641 Possible lysine decarboxylase LVJ83_10095 PF01842 ACT domain LVJ83_10095 PF00800 Prephenate dehydratase LVJ83_10095 PF01817 Chorismate mutase type II LVJ83_10100 PF07690 Major Facilitator Superfamily LVJ83_10110 PF07732 Multicopper oxidase LVJ83_10115 PF00115 Cytochrome C and Quinol oxidase polypeptide I LVJ83_10125 PF03006 Haemolysin-III related LVJ83_10130 PF00860 Permease family LVJ83_10135 PF04286 Protein of unknown function (DUF445) LVJ83_10155 PF02694 Uncharacterised BCR, YnfA/UPF0060 family LVJ83_10160 PF04011 LemA family LVJ83_10170 PF04321 RmlD substrate binding domain LVJ83_10175 PF00005 ABC transporter LVJ83_10175 PF08402 TOBE domain LVJ83_10180 PF00528 Binding-protein-dependent transport system inner membrane component LVJ83_10185 PF00528 Binding-protein-dependent transport system inner membrane component LVJ83_10190 PF01266 FAD dependent oxidoreductase LVJ83_10210 PF05195 Aminopeptidase P, N-terminal domain LVJ83_10210 PF00557 Metallopeptidase family M24 LVJ83_10215 PF03466 LysR substrate binding domain LVJ83_10215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LVJ83_10225 PF03060 Nitronate monooxygenase LVJ83_10230 PF00561 alpha/beta hydrolase fold LVJ83_10235 PF02678 Pirin LVJ83_10235 PF17954 Quercetinase C-terminal cupin domain LVJ83_10240 PF00893 Small Multidrug Resistance protein LVJ83_10250 PF00893 Small Multidrug Resistance protein LVJ83_10260 PF01323 DSBA-like thioredoxin domain LVJ83_10275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LVJ83_10275 PF03466 LysR substrate binding domain LVJ83_10280 PF00106 short chain dehydrogenase LVJ83_10285 PF00106 short chain dehydrogenase LVJ83_10290 PF00171 Aldehyde dehydrogenase family LVJ83_10300 PF13378 Enolase C-terminal domain-like LVJ83_10305 PF02525 Flavodoxin-like fold LVJ83_10310 PF00881 Nitroreductase family LVJ83_10315 PF12146 Serine aminopeptidase, S33 LVJ83_10320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LVJ83_10320 PF03466 LysR substrate binding domain LVJ83_10325 PF02254 TrkA-N domain LVJ83_10325 PF00999 Sodium/hydrogen exchanger family LVJ83_10330 PF00085 Thioredoxin LVJ83_10335 PF00924 Mechanosensitive ion channel LVJ83_10345 PF00005 ABC transporter LVJ83_10350 PF00398 Ribosomal RNA adenine dimethylase LVJ83_10365 PF01322 Cytochrome C' LVJ83_10370 PF00106 short chain dehydrogenase LVJ83_10380 PF07683 Cobalamin synthesis protein cobW C-terminal domain LVJ83_10380 PF02492 CobW/HypB/UreG, nucleotide-binding domain LVJ83_10385 PF07411 Domain of unknown function (DUF1508) LVJ83_10390 PF02666 Phosphatidylserine decarboxylase LVJ83_10395 PF16360 GTP-binding GTPase Middle Region LVJ83_10395 PF13167 GTP-binding GTPase N-terminal LVJ83_10395 PF01926 50S ribosome-binding GTPase LVJ83_10400 PF00107 Zinc-binding dehydrogenase LVJ83_10400 PF13823 Alcohol dehydrogenase GroES-associated LVJ83_10400 PF08240 Alcohol dehydrogenase GroES-like domain LVJ83_10405 PF10576 Iron-sulfur binding domain of endonuclease III LVJ83_10405 PF00633 Helix-hairpin-helix motif LVJ83_10405 PF00730 HhH-GPD superfamily base excision DNA repair protein LVJ83_10405 PF14815 NUDIX domain LVJ83_10410 PF04399 Glutaredoxin 2, C terminal domain LVJ83_10410 PF13417 Glutathione S-transferase, N-terminal domain LVJ83_10415 PF13291 ACT domain LVJ83_10415 PF04607 Region found in RelA / SpoT proteins LVJ83_10415 PF02824 TGS domain LVJ83_10430 PF00665 Integrase core domain LVJ83_10430 PF13333 Integrase core domain LVJ83_10430 PF13276 HTH-like domain LVJ83_10435 PF00465 Iron-containing alcohol dehydrogenase LVJ83_10450 PF01225 Mur ligase family, catalytic domain LVJ83_10450 PF02875 Mur ligase family, glutamate ligase domain LVJ83_10450 PF08245 Mur ligase middle domain LVJ83_10455 PF05525 Branched-chain amino acid transport protein LVJ83_10460 PF02578 Multi-copper polyphenol oxidoreductase laccase LVJ83_10465 PF01479 S4 domain LVJ83_10465 PF00849 RNA pseudouridylate synthase LVJ83_10470 PF13525 Outer membrane lipoprotein LVJ83_10475 PF13358 DDE superfamily endonuclease LVJ83_10515 PF00490 Delta-aminolevulinic acid dehydratase LVJ83_10520 PF01479 S4 domain LVJ83_10520 PF00849 RNA pseudouridylate synthase LVJ83_10525 PF04079 Segregation and condensation complex subunit ScpB LVJ83_10535 PF01926 50S ribosome-binding GTPase LVJ83_10540 PF03668 P-loop ATPase protein family LVJ83_10545 PF07475 HPr Serine kinase C-terminal domain LVJ83_10545 PF02603 HPr Serine kinase N terminus LVJ83_10550 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LVJ83_10555 PF01040 UbiA prenyltransferase family LVJ83_10560 PF04345 Chorismate lyase LVJ83_10570 PF01197 Ribosomal protein L31 LVJ83_10575 PF00444 Ribosomal protein L36 LVJ83_10580 PF03449 Transcription elongation factor, N-terminal LVJ83_10580 PF01272 Transcription elongation factor, GreA/GreB, C-term LVJ83_10585 PF00860 Permease family LVJ83_10590 PF00701 Dihydrodipicolinate synthetase family LVJ83_10595 PF06804 NlpB/DapX lipoprotein LVJ83_10600 PF00209 Sodium:neurotransmitter symporter family LVJ83_10605 PF01580 FtsK/SpoIIIE family LVJ83_10605 PF17854 FtsK alpha domain LVJ83_10605 PF09397 Ftsk gamma domain LVJ83_10605 PF13491 4TM region of DNA translocase FtsK/SpoIIIE LVJ83_10615 PF00762 Ferrochelatase LVJ83_10620 PF00083 Sugar (and other) transporter LVJ83_10625 PF00294 pfkB family carbohydrate kinase LVJ83_10630 PF03180 NLPA lipoprotein LVJ83_10635 PF00528 Binding-protein-dependent transport system inner membrane component LVJ83_10640 PF09383 NIL domain LVJ83_10640 PF00005 ABC transporter LVJ83_10645 PF01297 Zinc-uptake complex component A periplasmic LVJ83_10650 PF00950 ABC 3 transport family LVJ83_10655 PF00005 ABC transporter LVJ83_10665 PF00199 Catalase LVJ83_10665 PF06628 Catalase-related immune-responsive LVJ83_10670 PF00881 Nitroreductase family LVJ83_10675 PF03358 NADPH-dependent FMN reductase LVJ83_10680 PF03631 Virulence factor BrkB LVJ83_10685 PF03471 Transporter associated domain LVJ83_10685 PF00999 Sodium/hydrogen exchanger family LVJ83_10685 PF02080 TrkA-C domain LVJ83_10690 PF05661 Protein of unknown function (DUF808) LVJ83_10695 PF00795 Carbon-nitrogen hydrolase LVJ83_10700 PF00140 Sigma-70 factor, region 1.2 LVJ83_10700 PF04545 Sigma-70, region 4 LVJ83_10700 PF04542 Sigma-70 region 2 LVJ83_10705 PF00266 Aminotransferase class-V LVJ83_10715 PF02576 RimP N-terminal domain LVJ83_10715 PF17384 RimP C-terminal SH3 domain LVJ83_10720 PF13184 NusA-like KH domain LVJ83_10720 PF08529 NusA N-terminal domain LVJ83_10725 PF00009 Elongation factor Tu GTP binding domain LVJ83_10725 PF11987 Translation-initiation factor 2 LVJ83_10725 PF04760 Translation initiation factor IF-2, N-terminal region LVJ83_10740 PF00691 OmpA family LVJ83_10740 PF05736 OprF membrane domain LVJ83_10750 PF13533 Biotin-lipoyl like LVJ83_10750 PF13533 Biotin-lipoyl like LVJ83_10755 PF00664 ABC transporter transmembrane region LVJ83_10755 PF00005 ABC transporter LVJ83_10755 PF03412 Peptidase C39 family LVJ83_10765 PF01386 Ribosomal L25p family LVJ83_10765 PF14693 Ribosomal protein TL5, C-terminal domain LVJ83_10770 PF14572 Phosphoribosyl synthetase-associated domain LVJ83_10770 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase LVJ83_10785 PF08544 GHMP kinases C terminal LVJ83_10785 PF00288 GHMP kinases N terminal domain LVJ83_10790 PF03550 Outer membrane lipoprotein LolB LVJ83_10800 PF01336 OB-fold nucleic acid binding domain LVJ83_10800 PF02938 GAD domain LVJ83_10800 PF00152 tRNA synthetases class II (D, K and N) LVJ83_10810 PF02253 Phospholipase A1 LVJ83_10815 PF01649 Ribosomal protein S20 LVJ83_10820 PF13416 Bacterial extracellular solute-binding protein LVJ83_10835 PF00892 EamA-like transporter family LVJ83_10840 PF01195 Peptidyl-tRNA hydrolase LVJ83_10850 PF03658 RnfH family Ubiquitin LVJ83_10855 PF03364 Polyketide cyclase / dehydrase and lipid transport LVJ83_10865 PF14840 Processivity clamp loader gamma complex DNA pol III C-term LVJ83_10865 PF06144 DNA polymerase III, delta subunit LVJ83_10870 PF04390 Lipopolysaccharide-assembly LVJ83_10875 PF02934 GatB/GatE catalytic domain LVJ83_10875 PF02637 GatB domain LVJ83_10880 PF07995 Glucose / Sorbosone dehydrogenase LVJ83_10885 PF01425 Amidase LVJ83_10890 PF02686 Glu-tRNAGln amidotransferase C subunit LVJ83_10905 PF04093 rod shape-determining protein MreD LVJ83_10910 PF00905 Penicillin binding protein transpeptidase domain LVJ83_10910 PF03717 Penicillin-binding Protein dimerisation domain LVJ83_10915 PF01098 Cell cycle protein LVJ83_10920 PF01914 MarC family integral membrane protein LVJ83_10925 PF01389 OmpA-like transmembrane domain LVJ83_10925 PF00691 OmpA family LVJ83_10930 PF13018 Extended Signal Peptide of Type V secretion system LVJ83_10930 PF05662 Coiled stalk of trimeric autotransporter adhesin LVJ83_10930 PF05658 Head domain of trimeric autotransporter adhesin LVJ83_10930 PF03895 YadA-like membrane anchor domain LVJ83_10935 PF06426 Serine acetyltransferase, N-terminal LVJ83_10935 PF00132 Bacterial transferase hexapeptide (six repeats) LVJ83_10940 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain LVJ83_10940 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family LVJ83_10950 PF00171 Aldehyde dehydrogenase family LVJ83_10955 PF00202 Aminotransferase class-III LVJ83_10960 PF09339 IclR helix-turn-helix domain LVJ83_10960 PF01614 Bacterial transcriptional regulator LVJ83_10965 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LVJ83_10965 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LVJ83_10975 PF00665 Integrase core domain LVJ83_10975 PF13276 HTH-like domain LVJ83_10975 PF13333 Integrase core domain LVJ83_11145 PF07733 Bacterial DNA polymerase III alpha NTPase domain LVJ83_11145 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LVJ83_11145 PF02811 PHP domain LVJ83_11145 PF00929 Exonuclease LVJ83_11145 PF11490 DNA polymerase III polC-type N-terminus II LVJ83_11145 PF14579 Helix-hairpin-helix motif LVJ83_11170 PF02347 Glycine cleavage system P-protein LVJ83_11175 PF07690 Major Facilitator Superfamily LVJ83_11185 PF13673 Acetyltransferase (GNAT) domain LVJ83_11185 PF13302 Acetyltransferase (GNAT) domain LVJ83_11185 PF03352 Methyladenine glycosylase LVJ83_11185 PF00117 Glutamine amidotransferase class-I LVJ83_11185 PF00958 GMP synthase C terminal domain LVJ83_11190 PF01177 Asp/Glu/Hydantoin racemase LVJ83_11195 PF01597 Glycine cleavage H-protein LVJ83_11205 PF01571 Aminomethyltransferase folate-binding domain LVJ83_11205 PF08669 Glycine cleavage T-protein C-terminal barrel domain LVJ83_11210 PF01037 Lrp/AsnC ligand binding domain LVJ83_11220 PF04304 Protein of unknown function (DUF454) LVJ83_11230 PF00578 AhpC/TSA family LVJ83_11240 PF00380 Ribosomal protein S9/S16 LVJ83_11245 PF00572 Ribosomal protein L13 LVJ83_11255 PF05164 Cell division protein ZapA LVJ83_11265 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus LVJ83_11265 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus LVJ83_11270 PF03150 Di-haem cytochrome c peroxidase LVJ83_11270 PF00034 Cytochrome c LVJ83_11275 PF00109 Beta-ketoacyl synthase, N-terminal domain LVJ83_11275 PF02801 Beta-ketoacyl synthase, C-terminal domain LVJ83_11280 PF00550 Phosphopantetheine attachment site LVJ83_11285 PF00326 Prolyl oligopeptidase family LVJ83_11285 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain LVJ83_11290 PF00156 Phosphoribosyl transferase domain LVJ83_11300 PF00381 PTS HPr component phosphorylation site LVJ83_11305 PF05524 PEP-utilising enzyme, N-terminal LVJ83_11305 PF00391 PEP-utilising enzyme, mobile domain LVJ83_11305 PF02896 PEP-utilising enzyme, TIM barrel domain LVJ83_11310 PF00133 tRNA synthetases class I (I, L, M and V) LVJ83_11310 PF13603 Leucyl-tRNA synthetase, Domain 2 LVJ83_11310 PF09334 tRNA synthetases class I (M) LVJ83_11310 PF08264 Anticodon-binding domain of tRNA LVJ83_11320 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LVJ83_11330 PF02810 SEC-C motif LVJ83_11335 PF00459 Inositol monophosphatase family LVJ83_11340 PF04452 RNA methyltransferase LVJ83_11345 PF13276 HTH-like domain LVJ83_11345 PF00665 Integrase core domain LVJ83_11345 PF13333 Integrase core domain LVJ83_11355 PF07690 Major Facilitator Superfamily LVJ83_11375 PF03795 YCII-related domain LVJ83_11380 PF04279 Intracellular septation protein A LVJ83_11395 PF01416 tRNA pseudouridine synthase LVJ83_11405 PF00581 Rhodanese-like domain LVJ83_11415 PF00005 ABC transporter LVJ83_11415 PF12848 ABC transporter LVJ83_11430 PF01177 Asp/Glu/Hydantoin racemase LVJ83_11435 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE LVJ83_11440 PF11741 AMIN domain LVJ83_11440 PF01520 N-acetylmuramoyl-L-alanine amidase LVJ83_11445 PF00270 DEAD/DEAH box helicase LVJ83_11445 PF00271 Helicase conserved C-terminal domain LVJ83_11450 PF00392 Bacterial regulatory proteins, gntR family LVJ83_11450 PF07702 UTRA domain LVJ83_11455 PF02652 L-lactate permease LVJ83_11470 PF03812 2-keto-3-deoxygluconate permease LVJ83_11475 PF03812 2-keto-3-deoxygluconate permease LVJ83_11480 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase LVJ83_11490 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LVJ83_11490 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LVJ83_11495 PF07687 Peptidase dimerisation domain LVJ83_11495 PF01546 Peptidase family M20/M25/M40 LVJ83_11500 PF01168 Alanine racemase, N-terminal domain LVJ83_11500 PF00842 Alanine racemase, C-terminal domain LVJ83_11505 PF01266 FAD dependent oxidoreductase LVJ83_11510 PF01037 Lrp/AsnC ligand binding domain LVJ83_11520 PF01926 50S ribosome-binding GTPase LVJ83_11520 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal LVJ83_11525 PF11067 Protein of unknown function (DUF2868) LVJ83_11530 PF01039 Carboxyl transferase domain LVJ83_11530 PF17848 Acetyl-coA carboxylase zinc finger domain LVJ83_11535 PF00290 Tryptophan synthase alpha chain LVJ83_11540 PF13396 Phospholipase_D-nuclease N-terminal LVJ83_11540 PF13091 PLD-like domain LVJ83_11545 PF00692 dUTPase LVJ83_11550 PF04381 Putative exonuclease, RdgC LVJ83_11570 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system LVJ83_11585 PF02028 BCCT, betaine/carnitine/choline family transporter LVJ83_11590 PF05199 GMC oxidoreductase LVJ83_11590 PF00732 GMC oxidoreductase LVJ83_11600 PF00171 Aldehyde dehydrogenase family LVJ83_11605 PF03739 Lipopolysaccharide export system permease LptF/LptG LVJ83_11615 PF00883 Cytosol aminopeptidase family, catalytic domain LVJ83_11630 PF16325 Peptidase family U32 C-terminal domain LVJ83_11630 PF01136 Peptidase family U32 LVJ83_11650 PF01016 Ribosomal L27 protein LVJ83_11655 PF00829 Ribosomal prokaryotic L21 protein LVJ83_11660 PF00348 Polyprenyl synthetase LVJ83_11705 PF01636 Phosphotransferase enzyme family LVJ83_11715 PF00255 Glutathione peroxidase LVJ83_11725 PF00535 Glycosyl transferase family 2 LVJ83_11730 PF14883 Hypothetical glycosyl hydrolase family 13 LVJ83_11730 PF01522 Polysaccharide deacetylase LVJ83_11740 PF01967 MoaC family LVJ83_11745 PF00899 ThiF family LVJ83_11750 PF02580 D-Tyr-tRNA(Tyr) deacylase LVJ83_11755 PF00814 Glycoprotease family LVJ83_11760 PF06508 Queuosine biosynthesis protein QueC LVJ83_11765 PF01242 6-pyruvoyl tetrahydropterin synthase LVJ83_11770 PF04055 Radical SAM superfamily LVJ83_11775 PF02219 Methylenetetrahydrofolate reductase LVJ83_11780 PF03109 ABC1 family LVJ83_11785 PF07690 Major Facilitator Superfamily LVJ83_11800 PF01464 Transglycosylase SLT domain LVJ83_11800 PF14718 Soluble lytic murein transglycosylase L domain LVJ83_11805 PF02386 Cation transport protein LVJ83_11810 PF00005 ABC transporter LVJ83_11815 PF00528 Binding-protein-dependent transport system inner membrane component LVJ83_11820 PF00528 Binding-protein-dependent transport system inner membrane component LVJ83_11825 PF12849 PBP superfamily domain LVJ83_11830 PF01895 PhoU domain LVJ83_11835 PF13784 Fic/DOC family N-terminal LVJ83_11835 PF02661 Fic/DOC family LVJ83_11840 PF12441 CopG antitoxin of type II toxin-antitoxin system LVJ83_11915 PF13356 Arm DNA-binding domain LVJ83_11915 PF00589 Phage integrase family LVJ83_11925 PF03840 Preprotein translocase SecG subunit LVJ83_11930 PF00121 Triosephosphate isomerase LVJ83_11935 PF13185 GAF domain LVJ83_11945 PF00581 Rhodanese-like domain LVJ83_11950 PF04172 LrgB-like family LVJ83_11955 PF03788 LrgA family LVJ83_11965 PF00877 NlpC/P60 family LVJ83_11970 PF03109 ABC1 family LVJ83_11980 PF13090 Polyphosphate kinase C-terminal domain 2 LVJ83_11980 PF02503 Polyphosphate kinase middle domain LVJ83_11980 PF13089 Polyphosphate kinase N-terminal domain LVJ83_11980 PF17941 Polyphosphate kinase C-terminal domain 1 LVJ83_11990 PF00313 'Cold-shock' DNA-binding domain LVJ83_11995 PF14602 Hexapeptide repeat of succinyl-transferase LVJ83_11995 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal LVJ83_12000 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus LVJ83_12000 PF08666 SAF domain LVJ83_12005 PF03588 Leucyl/phenylalanyl-tRNA protein transferase LVJ83_12010 PF01475 Ferric uptake regulator family LVJ83_12015 PF04355 SmpA / OmlA family LVJ83_12020 PF05173 Dihydrodipicolinate reductase, C-terminus LVJ83_12020 PF01113 Dihydrodipicolinate reductase, N-terminus LVJ83_12025 PF00912 Transglycosylase LVJ83_12030 PF01488 Shikimate / quinate 5-dehydrogenase LVJ83_12030 PF18317 Shikimate 5'-dehydrogenase C-terminal domain LVJ83_12030 PF08501 Shikimate dehydrogenase substrate binding domain LVJ83_12035 PF03951 Glutamine synthetase, beta-Grasp domain LVJ83_12035 PF00120 Glutamine synthetase, catalytic domain LVJ83_12045 PF03616 Sodium/glutamate symporter LVJ83_12055 PF04060 Putative Fe-S cluster LVJ83_12065 PF00795 Carbon-nitrogen hydrolase LVJ83_12070 PF00267 Gram-negative porin LVJ83_12105 PF00145 C-5 cytosine-specific DNA methylase LVJ83_12110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LVJ83_12110 PF13426 PAS domain LVJ83_12110 PF13188 PAS domain LVJ83_12125 PF01695 IstB-like ATP binding protein LVJ83_12130 PF02796 Helix-turn-helix domain of resolvase LVJ83_12130 PF00665 Integrase core domain LVJ83_12135 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LVJ83_12135 PF00005 ABC transporter LVJ83_12140 PF00005 ABC transporter LVJ83_12140 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LVJ83_12145 PF00528 Binding-protein-dependent transport system inner membrane component LVJ83_12145 PF12911 N-terminal TM domain of oligopeptide transport permease C LVJ83_12150 PF00528 Binding-protein-dependent transport system inner membrane component LVJ83_12155 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LVJ83_12160 PF03710 Glutamate-ammonia ligase adenylyltransferase LVJ83_12160 PF08335 GlnD PII-uridylyltransferase LVJ83_12180 PF01467 Cytidylyltransferase-like LVJ83_12185 PF00749 tRNA synthetases class I (E and Q), catalytic domain LVJ83_12190 PF00814 Glycoprotease family LVJ83_12195 PF00583 Acetyltransferase (GNAT) family LVJ83_12205 PF04386 Stringent starvation protein B LVJ83_12210 PF02798 Glutathione S-transferase, N-terminal domain LVJ83_12210 PF00043 Glutathione S-transferase, C-terminal domain LVJ83_12220 PF02167 Cytochrome C1 family LVJ83_12225 PF00033 Cytochrome b/b6/petB LVJ83_12225 PF00032 Cytochrome b(C-terminal)/b6/petD LVJ83_12230 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal LVJ83_12230 PF00355 Rieske [2Fe-2S] domain LVJ83_12235 PF01784 NIF3 (NGG1p interacting factor 3) LVJ83_12245 PF00118 TCP-1/cpn60 chaperonin family LVJ83_12250 PF00166 Chaperonin 10 Kd subunit LVJ83_12265 PF01970 Tripartite tricarboxylate transporter TctA family LVJ83_12270 PF05145 Transition state regulatory protein AbrB LVJ83_12275 PF07715 TonB-dependent Receptor Plug Domain LVJ83_12275 PF00593 TonB dependent receptor LVJ83_12290 PF00756 Putative esterase LVJ83_12295 PF04954 Siderophore-interacting protein LVJ83_12295 PF08021 Siderophore-interacting FAD-binding domain LVJ83_12300 PF01497 Periplasmic binding protein LVJ83_12305 PF01032 FecCD transport family LVJ83_12310 PF01032 FecCD transport family LVJ83_12315 PF00005 ABC transporter LVJ83_12320 PF00311 Phosphoenolpyruvate carboxylase LVJ83_12325 PF01717 Cobalamin-independent synthase, Catalytic domain LVJ83_12330 PF01494 FAD binding domain LVJ83_12335 PF00463 Isocitrate lyase family LVJ83_12340 PF03279 Bacterial lipid A biosynthesis acyltransferase LVJ83_12360 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LVJ83_12360 PF02142 MGS-like domain LVJ83_12360 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LVJ83_12365 PF00561 alpha/beta hydrolase fold LVJ83_12370 PF04480 Protein of unknown function (DUF559) LVJ83_12375 PF02567 Phenazine biosynthesis-like protein LVJ83_12380 PF01810 LysE type translocator LVJ83_12390 PF00117 Glutamine amidotransferase class-I LVJ83_12390 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain LVJ83_12395 PF05567 Neisseria PilC beta-propeller domain LVJ83_12400 PF17810 Arginine decarboxylase helical bundle domain LVJ83_12400 PF17944 Arginine decarboxylase C-terminal helical extension LVJ83_12400 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LVJ83_12435 PF01258 Prokaryotic dksA/traR C4-type zinc finger LVJ83_12445 PF03807 NADP oxidoreductase coenzyme F420-dependent LVJ83_12445 PF14748 Pyrroline-5-carboxylate reductase dimerisation LVJ83_12450 PF01168 Alanine racemase, N-terminal domain LVJ83_12455 PF00437 Type II/IV secretion system protein LVJ83_12460 PF00437 Type II/IV secretion system protein LVJ83_12470 PF02978 Signal peptide binding domain LVJ83_12470 PF02881 SRP54-type protein, helical bundle domain LVJ83_12470 PF00448 SRP54-type protein, GTPase domain LVJ83_12475 PF00012 Hsp70 protein LVJ83_12480 PF01025 GrpE LVJ83_12485 PF12833 Helix-turn-helix domain LVJ83_12485 PF01965 DJ-1/PfpI family LVJ83_12490 PF00557 Metallopeptidase family M24 LVJ83_12490 PF01321 Creatinase/Prolidase N-terminal domain LVJ83_12495 PF08946 Osmosensory transporter coiled coil LVJ83_12495 PF00083 Sugar (and other) transporter LVJ83_12500 PF00892 EamA-like transporter family LVJ83_12505 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) LVJ83_12510 PF00583 Acetyltransferase (GNAT) family LVJ83_12520 PF01960 ArgJ family LVJ83_12525 PF00654 Voltage gated chloride channel LVJ83_12530 PF13559 Domain of unknown function (DUF4129) LVJ83_12530 PF11992 Domain of unknown function (DUF3488) LVJ83_12530 PF01841 Transglutaminase-like superfamily LVJ83_12540 PF07726 ATPase family associated with various cellular activities (AAA) LVJ83_12540 PF17863 AAA lid domain LVJ83_12545 PF07690 Major Facilitator Superfamily LVJ83_12555 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LVJ83_12560 PF01202 Shikimate kinase LVJ83_12565 PF02447 GntP family permease LVJ83_12575 PF02772 S-adenosylmethionine synthetase, central domain LVJ83_12575 PF00438 S-adenosylmethionine synthetase, N-terminal domain LVJ83_12575 PF02773 S-adenosylmethionine synthetase, C-terminal domain LVJ83_12585 PF00005 ABC transporter LVJ83_12590 PF01061 ABC-2 type transporter LVJ83_12600 PF02563 Polysaccharide biosynthesis/export protein LVJ83_12615 PF00535 Glycosyl transferase family 2 LVJ83_12625 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LVJ83_12625 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LVJ83_12625 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LVJ83_12630 PF00535 Glycosyl transferase family 2 LVJ83_12635 PF00793 DAHP synthetase I family LVJ83_12640 PF00483 Nucleotidyl transferase LVJ83_12645 PF16363 GDP-mannose 4,6 dehydratase LVJ83_12650 PF05159 Capsule polysaccharide biosynthesis protein LVJ83_12655 PF05159 Capsule polysaccharide biosynthesis protein LVJ83_12660 PF01556 DnaJ C terminal domain LVJ83_12660 PF00684 DnaJ central domain LVJ83_12660 PF00226 DnaJ domain LVJ83_12680 PF01389 OmpA-like transmembrane domain LVJ83_12680 PF00691 OmpA family LVJ83_12690 PF13018 Extended Signal Peptide of Type V secretion system LVJ83_12690 PF15401 Tryptophan-ring motif of head of Trimeric autotransporter adhesin LVJ83_12690 PF03895 YadA-like membrane anchor domain LVJ83_12690 PF05662 Coiled stalk of trimeric autotransporter adhesin LVJ83_12700 PF01196 Ribosomal protein L17 LVJ83_12705 PF01000 RNA polymerase Rpb3/RpoA insert domain LVJ83_12705 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain LVJ83_12705 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain LVJ83_12710 PF00163 Ribosomal protein S4/S9 N-terminal domain LVJ83_12710 PF01479 S4 domain LVJ83_12715 PF00411 Ribosomal protein S11 LVJ83_12720 PF00416 Ribosomal protein S13/S18 LVJ83_12725 PF00444 Ribosomal protein L36 LVJ83_12730 PF01176 Translation initiation factor 1A / IF-1 LVJ83_12735 PF00344 SecY translocase LVJ83_12740 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A LVJ83_12745 PF00327 Ribosomal protein L30p/L7e LVJ83_12750 PF00333 Ribosomal protein S5, N-terminal domain LVJ83_12750 PF03719 Ribosomal protein S5, C-terminal domain LVJ83_12755 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast LVJ83_12760 PF00347 Ribosomal protein L6 LVJ83_12765 PF00410 Ribosomal protein S8 LVJ83_12770 PF00253 Ribosomal protein S14p/S29e LVJ83_12775 PF00281 Ribosomal protein L5 LVJ83_12775 PF00673 ribosomal L5P family C-terminus LVJ83_12780 PF00467 KOW motif LVJ83_12780 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 LVJ83_12785 PF00238 Ribosomal protein L14p/L23e LVJ83_12790 PF00366 Ribosomal protein S17 LVJ83_12795 PF00831 Ribosomal L29 protein LVJ83_12800 PF00252 Ribosomal protein L16p/L10e LVJ83_12805 PF07650 KH domain LVJ83_12805 PF00189 Ribosomal protein S3, C-terminal domain LVJ83_12810 PF00237 Ribosomal protein L22p/L17e LVJ83_12815 PF00203 Ribosomal protein S19 LVJ83_12820 PF00181 Ribosomal Proteins L2, RNA binding domain LVJ83_12820 PF03947 Ribosomal Proteins L2, C-terminal domain LVJ83_12825 PF00276 Ribosomal protein L23 LVJ83_12830 PF00573 Ribosomal protein L4/L1 family LVJ83_12835 PF00297 Ribosomal protein L3 LVJ83_12845 PF01555 DNA methylase LVJ83_12845 PF18273 Type III R-M EcoP15I C-terminal domain LVJ83_12855 PF00176 SNF2 family N-terminal domain LVJ83_12855 PF00271 Helicase conserved C-terminal domain LVJ83_12860 PF00338 Ribosomal protein S10p/S20e LVJ83_12865 PF03144 Elongation factor Tu domain 2 LVJ83_12865 PF03143 Elongation factor Tu C-terminal domain LVJ83_12865 PF00009 Elongation factor Tu GTP binding domain LVJ83_12870 PF03144 Elongation factor Tu domain 2 LVJ83_12870 PF00009 Elongation factor Tu GTP binding domain LVJ83_12870 PF14492 Elongation Factor G, domain II LVJ83_12870 PF00679 Elongation factor G C-terminus LVJ83_12870 PF03764 Elongation factor G, domain IV LVJ83_12875 PF00177 Ribosomal protein S7p/S5e LVJ83_12880 PF00164 Ribosomal protein S12/S23 LVJ83_12885 PF04983 RNA polymerase Rpb1, domain 3 LVJ83_12885 PF04997 RNA polymerase Rpb1, domain 1 LVJ83_12885 PF00623 RNA polymerase Rpb1, domain 2 LVJ83_12885 PF04998 RNA polymerase Rpb1, domain 5 LVJ83_12885 PF05000 RNA polymerase Rpb1, domain 4 LVJ83_12890 PF00562 RNA polymerase Rpb2, domain 6 LVJ83_12890 PF10385 RNA polymerase beta subunit external 1 domain LVJ83_12890 PF04565 RNA polymerase Rpb2, domain 3 LVJ83_12890 PF04561 RNA polymerase Rpb2, domain 2 LVJ83_12890 PF04563 RNA polymerase beta subunit LVJ83_12890 PF04560 RNA polymerase Rpb2, domain 7 LVJ83_12895 PF00542 Ribosomal protein L7/L12 C-terminal domain LVJ83_12895 PF16320 Ribosomal protein L7/L12 dimerisation domain LVJ83_12900 PF00466 Ribosomal protein L10 LVJ83_12905 PF00687 Ribosomal protein L1p/L10e family LVJ83_12910 PF00298 Ribosomal protein L11, RNA binding domain LVJ83_12910 PF03946 Ribosomal protein L11, N-terminal domain LVJ83_12915 PF00467 KOW motif LVJ83_12915 PF02357 Transcription termination factor nusG LVJ83_12930 PF03143 Elongation factor Tu C-terminal domain LVJ83_12930 PF00009 Elongation factor Tu GTP binding domain LVJ83_12930 PF03144 Elongation factor Tu domain 2 LVJ83_12950 PF00037 4Fe-4S binding domain LVJ83_12965 PF01131 DNA topoisomerase LVJ83_12965 PF01751 Toprim domain LVJ83_12965 PF13368 Topoisomerase C-terminal repeat LVJ83_12970 PF04361 Protein of unknown function (DUF494) LVJ83_12975 PF02481 DNA recombination-mediator protein A LVJ83_12975 PF17782 DprA winged helix domain LVJ83_12980 PF01476 LysM domain LVJ83_12985 PF01327 Polypeptide deformylase LVJ83_12990 PF02911 Formyl transferase, C-terminal domain LVJ83_12990 PF00551 Formyl transferase LVJ83_12995 PF01189 16S rRNA methyltransferase RsmB/F LVJ83_12995 PF01029 NusB family LVJ83_13005 PF00672 HAMP domain LVJ83_13005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LVJ83_13005 PF00989 PAS fold LVJ83_13005 PF00512 His Kinase A (phospho-acceptor) domain LVJ83_13010 PF00072 Response regulator receiver domain LVJ83_13010 PF00158 Sigma-54 interaction domain LVJ83_13010 PF02954 Bacterial regulatory protein, Fis family LVJ83_13020 PF13667 ThiC-associated domain LVJ83_13020 PF01964 Radical SAM ThiC family LVJ83_13025 PF00881 Nitroreductase family LVJ83_13035 PF00875 DNA photolyase LVJ83_13035 PF03441 FAD binding domain of DNA photolyase LVJ83_13045 PF01197 Ribosomal protein L31 LVJ83_13050 PF00080 Copper/zinc superoxide dismutase (SODC) LVJ83_13055 PF09190 DALR domain LVJ83_13055 PF01406 tRNA synthetases class I (C) catalytic domain LVJ83_13070 PF01926 50S ribosome-binding GTPase LVJ83_13070 PF01018 GTP1/OBG LVJ83_13085 PF05662 Coiled stalk of trimeric autotransporter adhesin LVJ83_13085 PF05658 Head domain of trimeric autotransporter adhesin LVJ83_13085 PF03895 YadA-like membrane anchor domain LVJ83_13090 PF00300 Histidine phosphatase superfamily (branch 1) LVJ83_13095 PF01368 DHH family LVJ83_13095 PF02272 DHHA1 domain LVJ83_13095 PF17768 RecJ OB domain LVJ83_13105 PF01476 LysM domain LVJ83_13105 PF08525 Opacity-associated protein A N-terminal motif LVJ83_13105 PF01551 Peptidase family M23 LVJ83_13110 PF04632 Fusaric acid resistance protein family LVJ83_13115 PF03222 Tryptophan/tyrosine permease family LVJ83_13120 PF04973 Nicotinamide mononucleotide transporter LVJ83_13125 PF00270 DEAD/DEAH box helicase LVJ83_13125 PF18074 Primosomal protein N C-terminal domain LVJ83_13125 PF18319 PriA DNA helicase Cys-rich region (CRR) domain LVJ83_13125 PF17764 3′ DNA-binding domain (3′BD) LVJ83_13125 PF00271 Helicase conserved C-terminal domain LVJ83_13130 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family LVJ83_13135 PF00462 Glutaredoxin LVJ83_13140 PF02556 Preprotein translocase subunit SecB LVJ83_13150 PF00114 Pilin (bacterial filament) LVJ83_13150 PF07963 Prokaryotic N-terminal methylation motif LVJ83_13165 PF04224 Protein of unknown function, DUF417 LVJ83_13170 PF02627 Carboxymuconolactone decarboxylase family LVJ83_13175 PF12852 Cupin LVJ83_13175 PF12833 Helix-turn-helix domain LVJ83_13185 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LVJ83_13185 PF00056 lactate/malate dehydrogenase, NAD binding domain LVJ83_13190 PF10609 NUBPL iron-transfer P-loop NTPase LVJ83_13195 PF00300 Histidine phosphatase superfamily (branch 1) LVJ83_13205 PF03594 Benzoate membrane transport protein LVJ83_13215 PF13520 Amino acid permease LVJ83_13220 PF16124 RecQ zinc-binding LVJ83_13220 PF09382 RQC domain LVJ83_13220 PF00570 HRDC domain LVJ83_13220 PF00271 Helicase conserved C-terminal domain LVJ83_13220 PF00270 DEAD/DEAH box helicase LVJ83_13235 PF00043 Glutathione S-transferase, C-terminal domain LVJ83_13235 PF02798 Glutathione S-transferase, N-terminal domain LVJ83_13245 PF13614 AAA domain LVJ83_13250 PF02527 rRNA small subunit methyltransferase G LVJ83_13255 PF00111 2Fe-2S iron-sulfur cluster binding domain LVJ83_13270 PF01134 Glucose inhibited division protein A LVJ83_13270 PF13932 GidA associated domain LVJ83_13275 PF07690 Major Facilitator Superfamily LVJ83_13280 PF01541 GIY-YIG catalytic domain LVJ83_13285 PF03466 LysR substrate binding domain LVJ83_13285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LVJ83_13295 PF13460 NAD(P)H-binding LVJ83_13305 PF07733 Bacterial DNA polymerase III alpha NTPase domain LVJ83_13305 PF02811 PHP domain LVJ83_13305 PF01336 OB-fold nucleic acid binding domain LVJ83_13305 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LVJ83_13305 PF14579 Helix-hairpin-helix motif LVJ83_13310 PF01381 Helix-turn-helix LVJ83_13325 PF02811 PHP domain LVJ83_13330 PF03575 Peptidase family S51 LVJ83_13335 PF01300 Telomere recombination LVJ83_13340 PF02163 Peptidase family M50 LVJ83_13355 PF13358 DDE superfamily endonuclease LVJ83_13390 PF00892 EamA-like transporter family LVJ83_13395 PF02075 Crossover junction endodeoxyribonuclease RuvC LVJ83_13415 PF08267 Cobalamin-independent synthase, N-terminal domain LVJ83_13415 PF01717 Cobalamin-independent synthase, Catalytic domain LVJ83_13420 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LVJ83_13425 PF01292 Prokaryotic cytochrome b561 LVJ83_13430 PF02028 BCCT, betaine/carnitine/choline family transporter LVJ83_13440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LVJ83_13440 PF03466 LysR substrate binding domain LVJ83_13450 PF02562 PhoH-like protein LVJ83_13450 PF13638 PIN domain LVJ83_13455 PF02595 Glycerate kinase family LVJ83_13460 PF02447 GntP family permease LVJ83_13465 PF05651 Putative sugar diacid recognition LVJ83_13465 PF17853 GGDEF-like domain LVJ83_13465 PF13556 PucR C-terminal helix-turn-helix domain LVJ83_13470 PF01638 HxlR-like helix-turn-helix LVJ83_13480 PF00793 DAHP synthetase I family LVJ83_13510 PF05494 MlaC protein LVJ83_13515 PF02470 MlaD protein LVJ83_13520 PF02405 Permease MlaE LVJ83_13525 PF00005 ABC transporter LVJ83_13535 PF04166 Pyridoxal phosphate biosynthetic protein PdxA