locus-tag	class	description
LVJ83_00005	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
LVJ83_00005	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
LVJ83_00015	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
LVJ83_00020	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
LVJ83_00025	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
LVJ83_00025	COG1116	anion transmembrane transporter activity
LVJ83_00030	COG1611	Belongs to the LOG family
LVJ83_00035	COG1513	Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide
LVJ83_00065	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
LVJ83_00065	COG1116	anion transmembrane transporter activity
LVJ83_00070	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
LVJ83_00075	COG1116	anion transmembrane transporter activity
LVJ83_00085	COG4224	UPF0291 protein
LVJ83_00100	COG0167	dihydroorotate dehydrogenase activity
LVJ83_00150	COG0572	uridine kinase
LVJ83_00180	COG0142	geranyltranstransferase activity
LVJ83_00190	COG0671	phosphoesterase, PA-phosphatase related
LVJ83_00250	COG2824	Alkylphosphonate utilization operon protein PhnA
LVJ83_00265	COG3384	dioxygenase
LVJ83_00275	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
LVJ83_00280	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
LVJ83_00285	COG0405	Gamma-glutamyltransferase
LVJ83_00315	COG1335	isochorismatase
LVJ83_00320	COG0859	PFAM glycosyl transferase family 9
LVJ83_00340	COG1739	Uncharacterized protein family UPF0029
LVJ83_00380	COG1607	acyl-coa hydrolase
LVJ83_00400	COG0243	molybdopterin cofactor binding
LVJ83_00415	COG1178	ABC-type Fe3 transport system permease component
LVJ83_00420	COG3842	ATPase activity
LVJ83_00425	COG2119	membrane
LVJ83_00430	COG0564	pseudouridine synthase activity
LVJ83_00440	COG1519	Transferase
LVJ83_00445	COG3678	ATP-independent chaperone mediated protein folding
LVJ83_00450	COG4176	ABC-type proline glycine betaine transport system permease component
LVJ83_00455	COG4175	Glycine betaine
LVJ83_00455	COG0517	IMP dehydrogenase activity
LVJ83_00470	COG0672	)-iron permease
LVJ83_00475	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
LVJ83_00500	COG2884	Cell division ATP-binding protein ftsE
LVJ83_00535	COG0338	D12 class N6 adenine-specific DNA methyltransferase
LVJ83_00555	COG0653	protein targeting
LVJ83_00565	COG1199	ATP-dependent helicase activity
LVJ83_00585	COG2308	Evidence 4 Homologs of previously reported genes of
LVJ83_00595	COG1305	Transglutaminase-like
LVJ83_00615	COG3279	Response regulator of the LytR AlgR family
LVJ83_00625	COG0612	Peptidase, M16
LVJ83_00635	COG0842	Transport permease protein
LVJ83_00640	COG1131	(ABC) transporter
LVJ83_00645	COG1289	transmembrane transporter activity
LVJ83_00655	COG1643	Atp-dependent helicase
LVJ83_00690	COG0471	metal ion transport
LVJ83_00695	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
LVJ83_00715	COG0210	DNA helicase
LVJ83_00745	COG1115	amino acid carrier protein
LVJ83_00775	COG2911	Protein conserved in bacteria
LVJ83_00780	COG3335	DDE superfamily endonuclease
LVJ83_00790	COG0095	Lipoate-protein ligase
LVJ83_00795	COG0508	dehydrogenase complex catalyzes the overall conversion of
LVJ83_00795	COG0596	Alpha beta hydrolase
LVJ83_00800	COG0022	dehydrogenase e1 component
LVJ83_00805	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
LVJ83_00810	COG3199	ATP-NAD kinase
LVJ83_00815	COG3284	Transcriptional regulator
LVJ83_00820	COG2081	HI0933 family
LVJ83_00835	COG0356	it plays a direct role in the translocation of protons across the membrane
LVJ83_00880	COG2056	Na+-H+ antiporter family
LVJ83_00925	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
LVJ83_00930	COG1605	Chorismate mutase
LVJ83_00930	COG0287	Prephenate dehydrogenase
LVJ83_00950	COG1301	dicarboxylic acid transport
LVJ83_00960	COG0505	Belongs to the CarA family
LVJ83_00965	COG0831	urea catabolic process
LVJ83_00975	COG0411	ABC transporter
LVJ83_00985	COG0559	Belongs to the binding-protein-dependent transport system permease family
LVJ83_00995	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
LVJ83_01010	COG0501	Belongs to the peptidase M48B family
LVJ83_01025	COG0557	exoribonuclease II activity
LVJ83_01040	COG1752	Esterase of the alpha-beta hydrolase superfamily
LVJ83_01075	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
LVJ83_01090	COG1132	(ABC) transporter
LVJ83_01095	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
LVJ83_01115	COG1905	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
LVJ83_01170	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
LVJ83_01180	COG5002	protein histidine kinase activity
LVJ83_01200	COG0861	Integral membrane protein TerC family
LVJ83_01205	COG0583	DNA-binding transcription factor activity
LVJ83_01230	COG0833	amino acid
LVJ83_01275	COG1960	acyl-CoA dehydrogenase activity
LVJ83_01285	COG1024	Enoyl-CoA hydratase
LVJ83_01285	COG1250	3-hydroxyacyl-CoA dehydrogenase
LVJ83_01290	COG0183	Belongs to the thiolase family
LVJ83_01300	COG0450	alkyl hydroperoxide reductase
LVJ83_01305	COG0469	pyruvate kinase activity
LVJ83_01310	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
LVJ83_01315	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
LVJ83_01330	COG2239	Acts as a magnesium transporter
LVJ83_01350	COG2252	PERMEase
LVJ83_01360	COG3111	PFAM Bacterial OB fold (BOF) protein
LVJ83_01370	COG2814	Major facilitator Superfamily
LVJ83_01395	COG1333	cytochrome c biogenesis protein
LVJ83_01400	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
LVJ83_01405	COG1253	flavin adenine dinucleotide binding
LVJ83_01455	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
LVJ83_01525	COG1953	Uracil, thiamine, allantoin
LVJ83_01570	COG0288	reversible hydration of carbon dioxide
LVJ83_01580	COG0799	negative regulation of ribosome biogenesis
LVJ83_01605	COG1760	l-serine dehydratase
LVJ83_01615	COG0668	transmembrane transport
LVJ83_01620	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
LVJ83_01625	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
LVJ83_01655	COG3958	Transketolase
LVJ83_01660	COG3959	Transketolase, thiamine diphosphate binding domain
LVJ83_01665	COG1028	Short-chain dehydrogenase reductase Sdr
LVJ83_01670	COG0583	DNA-binding transcription factor activity
LVJ83_01680	COG2954	triphosphatase activity
LVJ83_01685	COG1981	membrane
LVJ83_01705	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
LVJ83_01740	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
LVJ83_01750	COG0584	glycerophosphoryl diester phosphodiesterase
LVJ83_01755	COG1793	dna ligase
LVJ83_01760	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
LVJ83_01810	COG0583	DNA-binding transcription factor activity
LVJ83_01815	COG1380	Effector of murein hydrolase LrgA
LVJ83_01820	COG1346	cytolysis
LVJ83_01840	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
LVJ83_01840	COG0616	signal peptide processing
LVJ83_01850	COG1476	TRANSCRIPTIONal
LVJ83_01870	COG1530	ribonuclease E activity
LVJ83_01880	COG1960	acyl-CoA dehydrogenase activity
LVJ83_01945	COG0004	ammonium transporteR
LVJ83_01950	COG0347	Belongs to the P(II) protein family
LVJ83_01980	COG2249	NAD(P)H dehydrogenase (quinone) activity
LVJ83_01985	COG1733	regulation of RNA biosynthetic process
LVJ83_01995	COG3048	D-serine ammonia-lyase activity
LVJ83_02000	COG0604	alcohol dehydrogenase
LVJ83_02005	COG1733	regulation of RNA biosynthetic process
LVJ83_02080	COG4773	Receptor
LVJ83_02085	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
LVJ83_02090	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LVJ83_02095	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LVJ83_02100	COG1120	ATPase activity
LVJ83_02105	COG0693	protein deglycase activity
LVJ83_02115	COG1012	belongs to the aldehyde dehydrogenase family
LVJ83_02165	COG0589	response to stress
LVJ83_02180	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
LVJ83_02240	COG0626	cystathionine gamma-synthase activity
LVJ83_02245	COG1252	NADH dehydrogenase
LVJ83_02250	COG0484	heat shock protein binding
LVJ83_02260	COG1562	ergosterol biosynthetic process
LVJ83_02270	COG1454	alcohol dehydrogenase
LVJ83_02270	COG1012	belongs to the aldehyde dehydrogenase family
LVJ83_02280	COG0788	formyltetrahydrofolate deformylase activity
LVJ83_02305	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
LVJ83_02335	COG0312	modulator of DNA gyrase
LVJ83_02350	COG1575	Belongs to the MenA family. Type 1 subfamily
LVJ83_02375	COG0708	Exodeoxyribonuclease III
LVJ83_02430	COG1028	Short-chain dehydrogenase reductase Sdr
LVJ83_02440	COG2259	Doxx family
LVJ83_02455	COG0517	IMP dehydrogenase activity
LVJ83_02455	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
LVJ83_02470	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
LVJ83_02475	COG1137	ATPase activity
LVJ83_02480	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
LVJ83_02485	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
LVJ83_02500	COG0439	Biotin carboxylase
LVJ83_02505	COG0511	ligase activity, forming carbon-carbon bonds
LVJ83_02520	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
LVJ83_02535	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
LVJ83_02550	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
LVJ83_02570	COG0438	transferase activity, transferring glycosyl groups
LVJ83_02585	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
LVJ83_02585	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
LVJ83_02595	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
LVJ83_02600	COG0121	glutamine amidotransferase
LVJ83_02610	COG0039	L-malate dehydrogenase activity
LVJ83_02620	COG4608	Belongs to the ABC transporter superfamily
LVJ83_02625	COG0444	Belongs to the ABC transporter superfamily
LVJ83_02630	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
LVJ83_02635	COG0601	transmembrane transport
LVJ83_02640	COG0747	negative chemotaxis
LVJ83_02645	COG1970	mechanosensitive ion channel activity
LVJ83_02655	COG4166	transmembrane transport
LVJ83_02665	COG0640	Transcriptional regulator
LVJ83_02675	COG0308	aminopeptidase N
LVJ83_02680	COG3152	Membrane
LVJ83_02695	COG2885	chlorophyll binding
LVJ83_02705	COG0012	GTP binding
LVJ83_02735	COG2828	Protein conserved in bacteria
LVJ83_02765	COG0372	Belongs to the citrate synthase family
LVJ83_02770	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
LVJ83_02800	COG2801	Transposase and inactivated derivatives
LVJ83_02820	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
LVJ83_02845	COG2813	Specifically methylates the guanine in position
LVJ83_02850	COG1902	pentaerythritol trinitrate reductase activity
LVJ83_02850	COG0446	pyridine nucleotide-disulphide oxidoreductase
LVJ83_02865	COG1561	YicC-like family, N-terminal region
LVJ83_02875	COG2801	Transposase and inactivated derivatives
LVJ83_02890	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
LVJ83_02900	COG0635	Involved in the biosynthesis of porphyrin-containing compound
LVJ83_02905	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
LVJ83_02910	COG0583	DNA-binding transcription factor activity
LVJ83_02925	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
LVJ83_02930	COG2967	ApaG domain
LVJ83_02935	COG1115	amino acid carrier protein
LVJ83_02945	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
LVJ83_03005	COG4582	Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity
LVJ83_03010	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
LVJ83_03030	COG0024	Methionine aminopeptidase
LVJ83_03055	COG0312	modulator of DNA gyrase
LVJ83_03120	COG2831	hemolysin activation secretion protein
LVJ83_03130	COG1115	amino acid carrier protein
LVJ83_03140	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
LVJ83_03140	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
LVJ83_03150	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
LVJ83_03160	COG1802	Transcriptional regulator
LVJ83_03170	COG1049	propionate catabolic process, 2-methylcitrate cycle
LVJ83_03180	COG1702	phosphate starvation-inducible protein PhoH
LVJ83_03205	COG0765	amino acid transport
LVJ83_03210	COG0765	amino acid transport
LVJ83_03215	COG1126	abc transporter atp-binding protein
LVJ83_03290	COG0805	protein transport
LVJ83_03305	COG0745	RESPONSE REGULATOR receiver
LVJ83_03325	COG0287	Prephenate dehydrogenase
LVJ83_03340	COG3278	Belongs to the heme-copper respiratory oxidase family
LVJ83_03355	COG2010	Cytochrome c
LVJ83_03360	COG1058	Belongs to the CinA family
LVJ83_03360	COG1546	Belongs to the CinA family
LVJ83_03415	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
LVJ83_03430	COG1028	Short-chain dehydrogenase reductase Sdr
LVJ83_03560	COG1523	belongs to the glycosyl hydrolase 13 family
LVJ83_03565	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
LVJ83_03580	COG2217	Heavy metal translocating P-type atpase
LVJ83_03590	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
LVJ83_03625	COG0800	Aldolase
LVJ83_03635	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
LVJ83_03660	COG0738	Major facilitator superfamily
LVJ83_03665	COG1757	Na H antiporter
LVJ83_03670	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
LVJ83_03715	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
LVJ83_03720	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
LVJ83_03730	COG1448	Aminotransferase
LVJ83_03735	COG2879	small protein
LVJ83_03740	COG1966	Carbon starvation protein
LVJ83_03750	COG1966	Carbon starvation protein
LVJ83_03755	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
LVJ83_03765	COG0393	Putative heavy-metal-binding
LVJ83_03775	COG4783	chaperone-mediated protein folding
LVJ83_03780	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
LVJ83_03790	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
LVJ83_03795	COG1765	OsmC-like protein
LVJ83_03810	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
LVJ83_03810	COG0678	peroxiredoxin activity
LVJ83_03825	COG0494	nUDIX hydrolase
LVJ83_03850	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
LVJ83_03860	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
LVJ83_03885	COG0673	inositol 2-dehydrogenase activity
LVJ83_03890	COG0477	Major facilitator Superfamily
LVJ83_03895	COG1942	4-Oxalocrotonate Tautomerase
LVJ83_03935	COG0436	Aminotransferase
LVJ83_03940	COG2070	2-Nitropropane dioxygenase
LVJ83_03955	COG0635	Involved in the biosynthesis of porphyrin-containing compound
LVJ83_03970	COG4178	(ABC) transporter
LVJ83_03980	COG4771	TonB-dependent receptor
LVJ83_03985	COG0633	Ferredoxin
LVJ83_03985	COG3217	Mosc domain protein beta barrel domain protein
LVJ83_04005	COG1027	Aspartate ammonia-lyase
LVJ83_04010	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
LVJ83_04025	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
LVJ83_04045	COG0488	(ABC) transporter
LVJ83_04050	COG0288	reversible hydration of carbon dioxide
LVJ83_04060	COG0179	Fumarylacetoacetate (FAA) hydrolase
LVJ83_04065	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LVJ83_04070	COG0765	amino acid transport
LVJ83_04075	COG1126	abc transporter atp-binding protein
LVJ83_04115	COG0513	Belongs to the DEAD box helicase family
LVJ83_04145	COG2814	Major facilitator Superfamily
LVJ83_04180	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
LVJ83_04195	COG0586	Pfam SNARE associated Golgi protein
LVJ83_04200	COG0010	Belongs to the arginase family
LVJ83_04205	COG0252	asparaginase activity
LVJ83_04225	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
LVJ83_04230	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
LVJ83_04255	COG1210	Utp--glucose-1-phosphate uridylyltransferase
LVJ83_04270	COG1562	ergosterol biosynthetic process
LVJ83_04275	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
LVJ83_04280	COG1028	Short-chain dehydrogenase reductase Sdr
LVJ83_04365	COG1610	YqeY-like protein
LVJ83_04375	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
LVJ83_04395	COG1686	Belongs to the peptidase S11 family
LVJ83_04415	COG1629	transport
LVJ83_04415	COG4771	TonB-dependent receptor
LVJ83_04420	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
LVJ83_04475	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
LVJ83_04485	COG2984	ABC transporter substrate binding protein
LVJ83_04495	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
LVJ83_04500	COG3945	hemerythrin HHE cation binding domain
LVJ83_04505	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
LVJ83_04510	COG2207	Transcriptional regulator
LVJ83_04515	COG0521	Mo-molybdopterin cofactor biosynthetic process
LVJ83_04520	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
LVJ83_04565	COG0277	FAD linked oxidase domain protein
LVJ83_04570	COG1882	Formate acetyltransferase
LVJ83_04575	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
LVJ83_04590	COG1619	proteins homologs of microcin C7 resistance protein MccF
LVJ83_04640	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
LVJ83_04840	COG2932	Transcriptional regulator
LVJ83_04905	COG4373	Mu-like prophage FluMu protein gp28
LVJ83_04920	COG2369	cell adhesion
LVJ83_04960	COG3210	domain, Protein
LVJ83_04995	COG0582	viral genome integration into host DNA
LVJ83_05045	COG0557	exoribonuclease II activity
LVJ83_05095	COG0039	L-malate dehydrogenase activity
LVJ83_05115	COG1053	succinate dehydrogenase
LVJ83_05120	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
LVJ83_05125	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
LVJ83_05135	COG0567	Dehydrogenase, E1 component
LVJ83_05140	COG0508	dehydrogenase complex catalyzes the overall conversion of
LVJ83_05150	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
LVJ83_05160	COG1070	Carbohydrate kinase
LVJ83_05180	COG2885	chlorophyll binding
LVJ83_05190	COG1914	H( )-stimulated, divalent metal cation uptake system
LVJ83_05200	COG1984	allophanate hydrolase subunit 2
LVJ83_05205	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
LVJ83_05215	COG4975	Glucose uptake
LVJ83_05225	COG1115	amino acid carrier protein
LVJ83_05230	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
LVJ83_05250	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
LVJ83_05255	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
LVJ83_05260	COG1862	Preprotein translocase
LVJ83_05265	COG0123	including yeast histone deacetylase and acetoin utilization protein
LVJ83_05275	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
LVJ83_05280	COG0110	maltose O-acetyltransferase activity
LVJ83_05295	COG1132	(ABC) transporter
LVJ83_05305	COG2431	L-lysine efflux transmembrane transporter activity
LVJ83_05320	COG0251	oxidation-reduction process
LVJ83_05335	COG0697	spore germination
LVJ83_05360	COG0583	DNA-binding transcription factor activity
LVJ83_05370	COG3647	Membrane
LVJ83_05375	COG0084	hydrolase, TatD family'
LVJ83_05380	COG2837	iron assimilation
LVJ83_05385	COG1408	metallophosphoesterase
LVJ83_05400	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
LVJ83_05405	COG2814	Major facilitator Superfamily
LVJ83_05410	COG0583	DNA-binding transcription factor activity
LVJ83_05425	COG3177	Filamentation induced by cAMP protein fic
LVJ83_05430	COG1846	Transcriptional regulator
LVJ83_05435	COG0300	oxidoreductase activity
LVJ83_05455	COG0667	Aldo Keto reductase
LVJ83_05465	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
LVJ83_05470	COG0859	PFAM glycosyl transferase family 9
LVJ83_05475	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
LVJ83_05510	COG1999	signal sequence binding
LVJ83_05555	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
LVJ83_05555	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
LVJ83_05565	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
LVJ83_05570	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
LVJ83_05600	COG2885	chlorophyll binding
LVJ83_05600	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
LVJ83_05610	COG1773	rubredoxin
LVJ83_05640	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
LVJ83_05645	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
LVJ83_05650	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
LVJ83_05695	COG4178	(ABC) transporter
LVJ83_05710	COG0628	permease
LVJ83_05730	COG0543	2 iron, 2 sulfur cluster binding
LVJ83_05730	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
LVJ83_05745	COG1982	Orn Lys Arg decarboxylase major
LVJ83_05765	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
LVJ83_05780	COG0281	malic enzyme
LVJ83_05795	COG0710	3-dehydroquinate dehydratase activity
LVJ83_05800	COG0725	ABC transporter, periplasmic molybdate-binding protein
LVJ83_05805	COG0110	maltose O-acetyltransferase activity
LVJ83_05810	COG4149	molybdate abc transporter
LVJ83_05815	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
LVJ83_05850	COG0307	riboflavin synthase, alpha
LVJ83_05860	COG1607	acyl-coa hydrolase
LVJ83_05865	COG0598	Magnesium transport protein CorA
LVJ83_05870	COG0248	Ppx GppA phosphatase
LVJ83_05900	COG1957	nucleoside hydrolase
LVJ83_05925	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
LVJ83_05955	COG1074	ATP-dependent DNA helicase activity
LVJ83_05960	COG1335	isochorismatase
LVJ83_05980	COG1216	Glycosyl transferase, family 2
LVJ83_05985	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
LVJ83_06005	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
LVJ83_06015	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
LVJ83_06030	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
LVJ83_06040	COG0702	epimerase
LVJ83_06045	COG0842	Transport permease protein
LVJ83_06045	COG1129	ABC transporter
LVJ83_06050	COG0842	Transport permease protein
LVJ83_06075	COG0656	L-ascorbic acid biosynthetic process
LVJ83_06085	COG1073	alpha beta
LVJ83_06105	COG0583	DNA-binding transcription factor activity
LVJ83_06140	COG1764	response to oxidative stress
LVJ83_06165	COG1187	pseudouridine synthase activity
LVJ83_06200	COG2801	Transposase and inactivated derivatives
LVJ83_06225	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
LVJ83_06245	COG1309	transcriptional regulator
LVJ83_06250	COG3383	formate dehydrogenase (NAD+) activity
LVJ83_06250	COG0243	molybdopterin cofactor binding
LVJ83_06255	COG0437	4 iron, 4 sulfur cluster binding
LVJ83_06260	COG2864	formate dehydrogenase
LVJ83_06270	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
LVJ83_06290	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
LVJ83_06300	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
LVJ83_06320	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
LVJ83_06325	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
LVJ83_06345	COG4607	ABC-type enterochelin transport system periplasmic component
LVJ83_06360	COG4774	siderophore transport
LVJ83_06370	COG0280	phosphate acetyltransferase
LVJ83_06370	COG0281	malic enzyme
LVJ83_06385	COG0488	(ABC) transporter
LVJ83_06410	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
LVJ83_06415	COG0067	glutamate synthase
LVJ83_06415	COG0069	glutamate synthase activity
LVJ83_06415	COG0070	glutamate synthase
LVJ83_06420	COG0493	'glutamate synthase
LVJ83_06425	COG0789	Transcriptional regulator
LVJ83_06440	COG0330	HflC and HflK could
LVJ83_06450	COG2975	iron-sulfur cluster assembly
LVJ83_06455	COG0633	Ferredoxin
LVJ83_06480	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
LVJ83_06490	COG1028	Short-chain dehydrogenase reductase Sdr
LVJ83_06495	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
LVJ83_06525	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
LVJ83_06530	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
LVJ83_06535	COG3012	SEC-C Motif Domain Protein
LVJ83_06535	COG3318	Belongs to the UPF0149 family
LVJ83_06625	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
LVJ83_06635	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
LVJ83_06660	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
LVJ83_06665	COG3094	Invasion gene expression up-regulator, SirB
LVJ83_06670	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
LVJ83_06675	COG1428	Deoxynucleoside kinase
LVJ83_06700	COG0385	Bile acid
LVJ83_06715	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
LVJ83_06720	COG2941	Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol
LVJ83_06730	COG0488	(ABC) transporter
LVJ83_06735	COG0583	DNA-binding transcription factor activity
LVJ83_06740	COG3162	membrane
LVJ83_06745	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
LVJ83_06760	COG0285	dihydrofolate synthase activity
LVJ83_06810	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
LVJ83_06815	COG1674	ftsk spoiiie
LVJ83_06815	COG1178	ABC-type Fe3 transport system permease component
LVJ83_06860	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
LVJ83_06875	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
LVJ83_06880	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
LVJ83_06900	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
LVJ83_06905	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
LVJ83_06935	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
LVJ83_06940	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
LVJ83_06945	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
LVJ83_06975	COG0778	Nitroreductase
LVJ83_06980	COG2841	Protein conserved in bacteria
LVJ83_06995	COG2895	sulfate adenylyltransferase (ATP) activity
LVJ83_06995	COG0529	Catalyzes the synthesis of activated sulfate
LVJ83_07010	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
LVJ83_07015	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
LVJ83_07015	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
LVJ83_07025	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
LVJ83_07050	COG3210	domain, Protein
LVJ83_07075	COG5444	nuclease activity
LVJ83_07115	COG3210	domain, Protein
LVJ83_07115	COG3210	domain, Protein
LVJ83_07120	COG2831	hemolysin activation secretion protein
LVJ83_07125	COG2321	neutral zinc metallopeptidase
LVJ83_07130	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
LVJ83_07135	COG4771	TonB-dependent receptor
LVJ83_07170	COG2217	Heavy metal translocating P-type atpase
LVJ83_07185	COG0477	Major facilitator Superfamily
LVJ83_07200	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
LVJ83_07220	COG1253	flavin adenine dinucleotide binding
LVJ83_07225	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
LVJ83_07235	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
LVJ83_07250	COG1538	Outer membrane efflux protein
LVJ83_07265	COG0756	dUTP diphosphatase activity
LVJ83_07280	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
LVJ83_07285	COG1120	ATPase activity
LVJ83_07320	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
LVJ83_07330	COG2116	formate transmembrane transporter activity
LVJ83_07335	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
LVJ83_07340	COG0494	nUDIX hydrolase
LVJ83_07345	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
LVJ83_07345	COG3264	Mechanosensitive ion channel
LVJ83_07360	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
LVJ83_07360	COG1648	precorrin-2 dehydrogenase activity
LVJ83_07375	COG2181	nitrate reductase activity
LVJ83_07380	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
LVJ83_07385	COG1140	nitrate reductase beta subunit
LVJ83_07390	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
LVJ83_07405	COG2197	response regulator
LVJ83_07410	COG3850	Histidine kinase
LVJ83_07420	COG0314	molybdopterin synthase activity
LVJ83_07430	COG0303	'Molybdopterin
LVJ83_07435	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
LVJ83_07435	COG2146	nitrite reductase [NAD(P)H] activity
LVJ83_07440	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
LVJ83_07465	COG1448	Aminotransferase
LVJ83_07470	COG3123	guanosine phosphorylase activity
LVJ83_07485	COG1217	gtp-binding protein TYPA
LVJ83_07495	COG0492	ferredoxin-NADP+ reductase activity
LVJ83_07500	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
LVJ83_07525	COG0656	L-ascorbic acid biosynthetic process
LVJ83_07540	COG3275	phosphorelay sensor kinase activity
LVJ83_07565	COG0633	Ferredoxin
LVJ83_07570	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
LVJ83_07575	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
LVJ83_07620	COG0105	UTP biosynthetic process
LVJ83_07625	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
LVJ83_07650	COG3568	Endonuclease Exonuclease Phosphatase
LVJ83_07660	COG0512	Glutamine amidotransferase of anthranilate synthase
LVJ83_07685	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
LVJ83_07690	COG0586	Pfam SNARE associated Golgi protein
LVJ83_07715	COG0318	PFAM AMP-dependent synthetase and ligase
LVJ83_07730	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
LVJ83_07735	COG2951	lytic endotransglycosylase activity
LVJ83_07760	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
LVJ83_07765	COG0508	dehydrogenase complex catalyzes the overall conversion of
LVJ83_07770	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
LVJ83_07785	COG2813	Specifically methylates the guanine in position
LVJ83_07785	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
LVJ83_07815	COG2801	Transposase and inactivated derivatives
LVJ83_07850	COG1262	PFAM Formylglycine-generating sulfatase enzyme
LVJ83_07860	COG1028	Short-chain dehydrogenase reductase Sdr
LVJ83_07870	COG2814	Major facilitator Superfamily
LVJ83_07880	COG2423	ornithine cyclodeaminase activity
LVJ83_07890	COG0477	Major facilitator Superfamily
LVJ83_07895	COG0477	Major facilitator Superfamily
LVJ83_07900	COG2326	polyphosphate kinase activity
LVJ83_07905	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
LVJ83_07910	COG0791	NLP P60 protein
LVJ83_07920	COG2814	Major facilitator Superfamily
LVJ83_07925	COG0583	DNA-binding transcription factor activity
LVJ83_07930	COG4948	Mandelate Racemase Muconate Lactonizing
LVJ83_07935	COG4829	muconolactone delta-isomerase
LVJ83_07945	COG4638	Rieske (2fe-2S)
LVJ83_07950	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
LVJ83_07955	COG0633	Ferredoxin
LVJ83_07955	COG0543	2 iron, 2 sulfur cluster binding
LVJ83_07960	COG1028	Short-chain dehydrogenase reductase Sdr
LVJ83_07965	COG3135	benzoate transporter
LVJ83_07975	COG0583	DNA-binding transcription factor activity
LVJ83_07980	COG2031	fatty acid transporter
LVJ83_07985	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
LVJ83_07990	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
LVJ83_07995	COG0183	Belongs to the thiolase family
LVJ83_08000	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
LVJ83_08005	COG0657	acetylesterase activity
LVJ83_08010	COG1064	alcohol dehydrogenase
LVJ83_08015	COG2315	Protein conserved in bacteria
LVJ83_08050	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
LVJ83_08085	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
LVJ83_08095	COG4615	Cyclic peptide transporter
LVJ83_08100	COG2833	Protein of unknown function (DUF455)
LVJ83_08115	COG2847	Copper chaperone PCu(A)C
LVJ83_08190	COG4774	siderophore transport
LVJ83_08210	COG1012	belongs to the aldehyde dehydrogenase family
LVJ83_08235	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
LVJ83_08240	COG1061	Type III restriction enzyme res subunit
LVJ83_08245	COG1002	Type II restriction enzyme, methylase subunits
LVJ83_08250	COG1002	Type II restriction enzyme, methylase subunits
LVJ83_08280	COG2116	formate transmembrane transporter activity
LVJ83_08300	COG2949	membrane
LVJ83_08310	COG1294	oxidase, subunit
LVJ83_08320	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
LVJ83_08325	COG4988	ABC transporter
LVJ83_08335	COG0583	DNA-binding transcription factor activity
LVJ83_08345	COG2801	Transposase and inactivated derivatives
LVJ83_08375	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
LVJ83_08395	COG0667	Aldo Keto reductase
LVJ83_08400	COG0210	DNA helicase
LVJ83_08410	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
LVJ83_08430	COG2866	Carboxypeptidase
LVJ83_08450	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
LVJ83_08455	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
LVJ83_08455	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
LVJ83_08460	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
LVJ83_08485	COG4172	Belongs to the ABC transporter superfamily
LVJ83_08490	COG4239	(ABC) transporter, permease
LVJ83_08495	COG4174	ABC transporter (Permease)
LVJ83_08510	COG3753	Protein conserved in bacteria
LVJ83_08530	COG0793	Belongs to the peptidase S41A family
LVJ83_08545	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
LVJ83_08575	COG0569	domain protein
LVJ83_08585	COG0471	metal ion transport
LVJ83_08595	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
LVJ83_08615	COG0501	Belongs to the peptidase M48B family
LVJ83_08630	COG0156	8-amino-7-oxononanoate synthase activity
LVJ83_08635	COG2226	methyltransferase
LVJ83_08650	COG5266	PFAM Nickel transport complex, NikM subunit, transmembrane
LVJ83_08655	COG5266	PFAM Nickel transport complex, NikM subunit, transmembrane
LVJ83_08700	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
LVJ83_08705	COG1686	Belongs to the peptidase S11 family
LVJ83_08710	COG0617	tRNA 3'-terminal CCA addition
LVJ83_08730	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
LVJ83_08765	COG1247	-acetyltransferase
LVJ83_08775	COG0583	DNA-binding transcription factor activity
LVJ83_08800	COG0656	L-ascorbic acid biosynthetic process
LVJ83_08810	COG0667	Aldo Keto reductase
LVJ83_08820	COG1064	alcohol dehydrogenase
LVJ83_08825	COG2207	Transcriptional regulator
LVJ83_08870	COG0318	PFAM AMP-dependent synthetase and ligase
LVJ83_08885	COG1304	FMN binding
LVJ83_08900	COG0822	iron-sulfur transferase activity
LVJ83_08905	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
LVJ83_08945	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
LVJ83_08950	COG4208	sulfate ABC transporter
LVJ83_08960	COG0471	metal ion transport
LVJ83_09010	COG0640	Transcriptional regulator
LVJ83_09015	COG0183	Belongs to the thiolase family
LVJ83_09060	COG2995	paraquat-inducible protein a
LVJ83_09065	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
LVJ83_09065	COG3008	intermembrane lipid transfer
LVJ83_09085	COG2176	DNA-directed DNA polymerase activity
LVJ83_09100	COG2223	nitrite transmembrane transporter activity
LVJ83_09105	COG0175	sulfate reduction
LVJ83_09120	COG1902	pentaerythritol trinitrate reductase activity
LVJ83_09125	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
LVJ83_09130	COG0640	Transcriptional regulator
LVJ83_09135	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
LVJ83_09140	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
LVJ83_09155	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
LVJ83_09170	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
LVJ83_09175	COG2839	Protein conserved in bacteria
LVJ83_09185	COG1388	LysM domain
LVJ83_09185	COG0741	lytic transglycosylase activity
LVJ83_09185	COG1388	LysM domain
LVJ83_09185	COG0741	lytic transglycosylase activity
LVJ83_09200	COG0497	DNA recombination
LVJ83_09210	COG2801	Transposase and inactivated derivatives
LVJ83_09235	COG2959	enzyme of heme biosynthesis
LVJ83_09250	COG1959	2 iron, 2 sulfur cluster binding
LVJ83_09285	COG1278	Cold shock
LVJ83_09315	COG0582	viral genome integration into host DNA
LVJ83_09320	COG0582	viral genome integration into host DNA
LVJ83_09340	COG1724	mRNA binding
LVJ83_09345	COG1598	PFAM Uncharacterised protein family UPF0150
LVJ83_09350	COG5005	Phage virion morphogenesis
LVJ83_09355	COG2369	cell adhesion
LVJ83_09360	COG4383	Mu-like prophage protein gp29
LVJ83_09435	COG1187	pseudouridine synthase activity
LVJ83_09450	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
LVJ83_09460	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
LVJ83_09465	COG1393	Belongs to the ArsC family
LVJ83_09480	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
LVJ83_09495	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
LVJ83_09515	COG0084	hydrolase, TatD family'
LVJ83_09520	COG0321	lipoyl(octanoyl) transferase activity
LVJ83_09520	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
LVJ83_09535	COG1652	LysM domain
LVJ83_09545	COG0730	response to heat
LVJ83_09555	COG1183	phosphatidylcholine synthase activity
LVJ83_09575	COG0440	acetolactate synthase activity
LVJ83_09580	COG0028	Belongs to the TPP enzyme family
LVJ83_09600	COG0640	Transcriptional regulator
LVJ83_09615	COG0516	GMP reductase activity
LVJ83_09615	COG0517	IMP dehydrogenase activity
LVJ83_09630	COG1529	Aldehyde oxidase and xanthine dehydrogenase
LVJ83_09640	COG0402	S-adenosylhomocysteine deaminase activity
LVJ83_09670	COG1518	maintenance of DNA repeat elements
LVJ83_09710	COG1337	RAMP superfamily
LVJ83_09725	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
LVJ83_09755	COG0582	viral genome integration into host DNA
LVJ83_09785	COG0463	Glycosyl transferase, family 2
LVJ83_09810	COG2161	toxin-antitoxin pair type II binding
LVJ83_09825	COG1064	alcohol dehydrogenase
LVJ83_09860	COG0733	neurotransmitter:sodium symporter activity
LVJ83_09875	COG0280	phosphate acetyltransferase
LVJ83_09875	COG0857	belongs to the CobB CobQ family
LVJ83_09880	COG0561	phosphatase activity
LVJ83_09890	COG0433	COG0433 Predicted ATPase
LVJ83_09895	COG0346	lactoylglutathione lyase activity
LVJ83_09925	COG0196	riboflavin kinase activity
LVJ83_09930	COG0765	amino acid transport
LVJ83_09935	COG1538	Outer membrane efflux protein
LVJ83_09945	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
LVJ83_09965	COG3194	Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source
LVJ83_09975	COG4266	Belongs to the allantoicase family
LVJ83_09985	COG3195	allantoin biosynthetic process
LVJ83_09985	COG3648	Uricase
LVJ83_10015	COG3842	ATPase activity
LVJ83_10020	COG0300	oxidoreductase activity
LVJ83_10030	COG1530	ribonuclease E activity
LVJ83_10035	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
LVJ83_10040	COG0247	lactate metabolic process
LVJ83_10045	COG0277	FAD linked oxidase domain protein
LVJ83_10050	COG3739	integral membrane protein
LVJ83_10055	COG0277	FAD linked oxidase domain protein
LVJ83_10060	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
LVJ83_10100	COG2814	Major facilitator Superfamily
LVJ83_10115	COG3256	nitric oxide reductase
LVJ83_10125	COG1272	protein, Hemolysin III
LVJ83_10130	COG2233	PERMEase
LVJ83_10135	COG2733	membrane
LVJ83_10155	COG1742	UPF0060 membrane protein
LVJ83_10160	COG1704	LemA family
LVJ83_10170	COG1091	dTDP-4-dehydrorhamnose reductase activity
LVJ83_10175	COG3842	ATPase activity
LVJ83_10180	COG1176	ABC-type spermidine putrescine transport system, permease component I
LVJ83_10185	COG1177	transmembrane transport
LVJ83_10190	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
LVJ83_10210	COG0006	proline dipeptidase activity
LVJ83_10225	COG2070	2-Nitropropane dioxygenase
LVJ83_10230	COG2267	carboxylic ester hydrolase activity
LVJ83_10235	COG1741	Belongs to the pirin family
LVJ83_10260	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
LVJ83_10275	COG0583	DNA-binding transcription factor activity
LVJ83_10280	COG4221	oxidoreductase activity
LVJ83_10285	COG1028	Short-chain dehydrogenase reductase Sdr
LVJ83_10300	COG4948	Mandelate Racemase Muconate Lactonizing
LVJ83_10305	COG2249	NAD(P)H dehydrogenase (quinone) activity
LVJ83_10310	COG0778	Nitroreductase
LVJ83_10315	COG1073	alpha beta
LVJ83_10325	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
LVJ83_10325	COG0475	glutathione-regulated potassium exporter activity
LVJ83_10330	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
LVJ83_10335	COG0668	transmembrane transport
LVJ83_10345	COG1126	abc transporter atp-binding protein
LVJ83_10355	COG1238	metal cluster binding
LVJ83_10365	COG3909	cytochrome
LVJ83_10370	COG4221	oxidoreductase activity
LVJ83_10380	COG0523	cobalamin synthesis protein
LVJ83_10395	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
LVJ83_10405	COG1194	a g-specific adenine glycosylase
LVJ83_10410	COG2999	glutathione oxidoreductase activity
LVJ83_10415	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
LVJ83_10430	COG2801	Transposase and inactivated derivatives
LVJ83_10435	COG0371	Dehydrogenase
LVJ83_10450	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
LVJ83_10455	COG1114	Component of the transport system for branched-chain amino acids
LVJ83_10475	COG3335	DDE superfamily endonuclease
LVJ83_10485	COG1555	photosystem II stabilization
LVJ83_10525	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
LVJ83_10535	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
LVJ83_10560	COG3161	chorismate lyase activity
LVJ83_10585	COG2233	PERMEase
LVJ83_10600	COG0733	neurotransmitter:sodium symporter activity
LVJ83_10620	COG2814	Major facilitator Superfamily
LVJ83_10625	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
LVJ83_10630	COG1464	Belongs to the NlpA lipoprotein family
LVJ83_10635	COG2011	ABC-type metal ion transport system permease component
LVJ83_10640	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
LVJ83_10645	COG0803	Belongs to the bacterial solute-binding protein 9 family
LVJ83_10665	COG0753	catalase activity
LVJ83_10690	COG2354	Protein conserved in bacteria
LVJ83_10740	COG2885	chlorophyll binding
LVJ83_10740	COG3047	cAMP biosynthetic process
LVJ83_10755	COG2274	protein secretion by the type I secretion system
LVJ83_10815	COG0268	Binds directly to 16S ribosomal RNA
LVJ83_10835	COG0697	spore germination
LVJ83_10855	COG2867	negative regulation of translational initiation
LVJ83_10865	COG1466	dna polymerase III delta subunit
LVJ83_10870	COG2980	Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane
LVJ83_10880	COG2133	pyrroloquinoline quinone binding
LVJ83_10895	COG1077	Cell shape determining protein MreB Mrl
LVJ83_10905	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
LVJ83_10910	COG0768	penicillin binding
LVJ83_10915	COG0772	Belongs to the SEDS family
LVJ83_10920	COG2095	MarC family integral membrane protein
LVJ83_10955	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
LVJ83_10960	COG1414	Transcriptional regulator
LVJ83_10975	COG2801	Transposase and inactivated derivatives
LVJ83_11145	COG2176	DNA-directed DNA polymerase activity
LVJ83_11175	COG2814	Major facilitator Superfamily
LVJ83_11185	COG0519	Catalyzes the synthesis of GMP from XMP
LVJ83_11190	COG1794	racemase activity, acting on amino acids and derivatives
LVJ83_11210	COG1522	sequence-specific DNA binding
LVJ83_11220	COG2832	Protein of unknown function (DUF454)
LVJ83_11230	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
LVJ83_11245	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
LVJ83_11285	COG1505	serine-type exopeptidase activity
LVJ83_11290	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
LVJ83_11305	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
LVJ83_11320	COG1902	pentaerythritol trinitrate reductase activity
LVJ83_11330	COG3012	SEC-C Motif Domain Protein
LVJ83_11340	COG1385	rRNA (uridine-N3-)-methyltransferase activity
LVJ83_11345	COG2801	Transposase and inactivated derivatives
LVJ83_11355	COG2814	Major facilitator Superfamily
LVJ83_11375	COG2350	Protein conserved in bacteria
LVJ83_11405	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
LVJ83_11415	COG0488	(ABC) transporter
LVJ83_11435	COG0802	atpase or kinase
LVJ83_11445	COG0513	Belongs to the DEAD box helicase family
LVJ83_11450	COG2188	Transcriptional regulator
LVJ83_11455	COG1620	l-lactate permease
LVJ83_11530	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
LVJ83_11540	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
LVJ83_11570	COG1598	PFAM Uncharacterised protein family UPF0150
LVJ83_11585	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
LVJ83_11605	COG0795	lipopolysaccharide-transporting ATPase activity
LVJ83_11630	COG0826	peptidase U32
LVJ83_11660	COG0142	geranyltranstransferase activity
LVJ83_11675	COG1555	photosystem II stabilization
LVJ83_11710	COG0560	Phosphoserine phosphatase
LVJ83_11725	COG1215	transferase activity, transferring glycosyl groups
LVJ83_11730	COG0726	polysaccharide deacetylase
LVJ83_11730	COG1649	PFAM Uncharacterised BCR, COG1649
LVJ83_11740	COG0315	cyclic pyranopterin monophosphate synthase activity
LVJ83_11745	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
LVJ83_11765	COG0720	synthase
LVJ83_11775	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
LVJ83_11810	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
LVJ83_11820	COG0573	inorganic phosphate transmembrane transporter activity
LVJ83_11915	COG0582	viral genome integration into host DNA
LVJ83_11925	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
LVJ83_11935	COG1956	GAF domain-containing protein
LVJ83_11940	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
LVJ83_11950	COG1346	cytolysis
LVJ83_11955	COG1380	Effector of murein hydrolase LrgA
LVJ83_11965	COG0791	NLP P60 protein
LVJ83_11990	COG1278	Cold shock
LVJ83_12000	COG2721	sulfolactate sulfo-lyase activity
LVJ83_12045	COG0786	glutamate:sodium symporter activity
LVJ83_12055	COG2878	Part of a membrane complex involved in electron transport
LVJ83_12065	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
LVJ83_12135	COG4608	Belongs to the ABC transporter superfamily
LVJ83_12145	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
LVJ83_12155	COG0859	PFAM glycosyl transferase family 9
LVJ83_12190	COG1214	PFAM Peptidase M22, glycoprotease
LVJ83_12195	COG0456	acetyltransferase
LVJ83_12205	COG2969	positive regulation of protein catabolic process
LVJ83_12210	COG0625	glutathione transferase activity
LVJ83_12220	COG2857	Cytochrome c1
LVJ83_12225	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
LVJ83_12230	COG0723	plastoquinol--plastocyanin reductase activity
LVJ83_12270	COG3180	Ammonia monooxygenase
LVJ83_12275	COG4771	TonB-dependent receptor
LVJ83_12290	COG2819	hydrolase of the alpha beta superfamily
LVJ83_12295	COG2375	cellular response to nickel ion
LVJ83_12300	COG4607	ABC-type enterochelin transport system periplasmic component
LVJ83_12305	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LVJ83_12310	COG4605	iron ion homeostasis
LVJ83_12315	COG4604	ABC transporter, ATP-binding protein
LVJ83_12325	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
LVJ83_12340	COG1560	Kdo2-lipid A biosynthetic process
LVJ83_12370	COG2852	Protein conserved in bacteria
LVJ83_12400	COG1166	arginine decarboxylase activity
LVJ83_12405	COG1555	photosystem II stabilization
LVJ83_12470	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
LVJ83_12495	COG0477	Major facilitator Superfamily
LVJ83_12500	COG0697	spore germination
LVJ83_12505	COG4579	[isocitrate dehydrogenase (NADP+)] phosphatase activity
LVJ83_12510	COG1247	-acetyltransferase
LVJ83_12525	COG0038	chloride channel
LVJ83_12540	COG0714	Associated with various cellular activities
LVJ83_12545	COG0477	Major facilitator Superfamily
LVJ83_12560	COG3265	gluconokinase activity
LVJ83_12565	COG2610	gluconate transmembrane transporter activity
LVJ83_12630	COG1215	transferase activity, transferring glycosyl groups
LVJ83_12680	COG2885	chlorophyll binding
LVJ83_12680	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
LVJ83_12725	COG0257	Belongs to the bacterial ribosomal protein bL36 family
LVJ83_12735	COG0201	protein transport
LVJ83_12800	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
LVJ83_12855	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
LVJ83_12950	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
LVJ83_12955	COG0742	ribosomal rna small subunit methyltransferase
LVJ83_12960	COG1476	TRANSCRIPTIONal
LVJ83_12975	COG0758	DNA mediated transformation
LVJ83_12980	COG1652	LysM domain
LVJ83_12995	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
LVJ83_12995	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
LVJ83_13005	COG5000	phosphorelay sensor kinase activity
LVJ83_13010	COG2204	response regulator
LVJ83_13025	COG0778	Nitroreductase
LVJ83_13035	COG0415	Belongs to the DNA photolyase family
LVJ83_13105	COG0739	heme binding
LVJ83_13115	COG0814	amino acid
LVJ83_13125	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
LVJ83_13165	COG3059	membrane
LVJ83_13170	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
LVJ83_13190	COG0489	protein tyrosine kinase activity
LVJ83_13205	COG3135	benzoate transporter
LVJ83_13215	COG0531	amino acid
LVJ83_13220	COG0514	ATP-dependent DNA helicase (RecQ)
LVJ83_13235	COG0625	glutathione transferase activity
LVJ83_13245	COG1192	Involved in chromosome partitioning
LVJ83_13275	COG2814	Major facilitator Superfamily
LVJ83_13280	COG2827	Endonuclease containing a URI domain
LVJ83_13285	COG0583	DNA-binding transcription factor activity
LVJ83_13295	COG2910	NAD(P)H-binding
LVJ83_13325	COG0613	PHP domain protein
LVJ83_13330	COG3340	Belongs to the peptidase S51 family
LVJ83_13335	COG0009	L-threonylcarbamoyladenylate synthase
LVJ83_13340	COG1994	Peptidase M50
LVJ83_13355	COG3335	DDE superfamily endonuclease
LVJ83_13360	COG1555	photosystem II stabilization
LVJ83_13390	COG2962	Rard protein
LVJ83_13420	COG1902	pentaerythritol trinitrate reductase activity
LVJ83_13425	COG3038	cytochrome b561
LVJ83_13440	COG0583	DNA-binding transcription factor activity
LVJ83_13450	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
LVJ83_13455	COG1929	Belongs to the glycerate kinase type-1 family
LVJ83_13460	COG2610	gluconate transmembrane transporter activity
LVJ83_13465	COG3835	regulator
LVJ83_13470	COG1733	regulation of RNA biosynthetic process
LVJ83_13480	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
LVJ83_13490	COG0824	Thioesterase
LVJ83_13510	COG2854	intermembrane phospholipid transfer
LVJ83_13515	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
LVJ83_13520	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
LVJ83_13525	COG1127	ABC transporter