locus-tag class description M2909_00035 PF00528 Binding-protein-dependent transport system inner membrane component M2909_00040 PF00005 ABC transporter M2909_00040 PF00571 CBS domain M2909_00045 PF07729 FCD domain M2909_00045 PF00392 Bacterial regulatory proteins, gntR family M2909_00050 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain M2909_00050 PF00056 lactate/malate dehydrogenase, NAD binding domain M2909_00065 PF01070 FMN-dependent dehydrogenase M2909_00070 PF08544 GHMP kinases C terminal M2909_00070 PF00288 GHMP kinases N terminal domain M2909_00080 PF08544 GHMP kinases C terminal M2909_00080 PF00288 GHMP kinases N terminal domain M2909_00080 PF10509 Galactokinase galactose-binding signature M2909_00095 PF00368 Hydroxymethylglutaryl-coenzyme A reductase M2909_00100 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal M2909_00100 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal M2909_00105 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD M2909_00115 PF02954 Bacterial regulatory protein, Fis family M2909_00115 PF13426 PAS domain M2909_00115 PF00158 Sigma-54 interaction domain M2909_00120 PF00465 Iron-containing alcohol dehydrogenase M2909_00125 PF00171 Aldehyde dehydrogenase family M2909_00130 PF06130 Phosphate propanoyltransferase M2909_00140 PF00871 Acetokinase family M2909_00145 PF00465 Iron-containing alcohol dehydrogenase M2909_00150 PF01018 GTP1/OBG M2909_00150 PF01926 50S ribosome-binding GTPase M2909_00150 PF09269 Domain of unknown function (DUF1967) M2909_00155 PF00753 Metallo-beta-lactamase superfamily M2909_00155 PF12706 Beta-lactamase superfamily domain M2909_00160 PF00106 short chain dehydrogenase M2909_00170 PF02492 CobW/HypB/UreG, nucleotide-binding domain M2909_00170 PF07683 Cobalamin synthesis protein cobW C-terminal domain M2909_00175 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment M2909_00175 PF01297 Zinc-uptake complex component A periplasmic M2909_00180 PF17768 RecJ OB domain M2909_00180 PF10141 Single-strand DNA-specific exonuclease, C terminal domain M2909_00180 PF01368 DHH family M2909_00180 PF02272 DHHA1 domain M2909_00185 PF00156 Phosphoribosyl transferase domain M2909_00200 PF10576 Iron-sulfur binding domain of endonuclease III M2909_00200 PF00633 Helix-hairpin-helix motif M2909_00200 PF00730 HhH-GPD superfamily base excision DNA repair protein M2909_00205 PF00912 Transglycosylase M2909_00205 PF00905 Penicillin binding protein transpeptidase domain M2909_00210 PF03838 Recombination protein U M2909_00215 PF06908 YspA SLOG family M2909_00220 PF05103 DivIVA protein M2909_00230 PF02926 THUMP domain M2909_00230 PF01170 Putative RNA methylase family UPF0020 M2909_00235 PF02074 Carboxypeptidase Taq (M32) metallopeptidase M2909_00240 PF00375 Sodium:dicarboxylate symporter family M2909_00245 PF13456 Reverse transcriptase-like M2909_00255 PF00313 'Cold-shock' DNA-binding domain M2909_00270 PF01252 Signal peptidase (SPase) II M2909_00275 PF00849 RNA pseudouridylate synthase M2909_00275 PF01479 S4 domain M2909_00280 PF00156 Phosphoribosyl transferase domain M2909_00285 PF00860 Permease family M2909_00290 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain M2909_00290 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain M2909_00295 PF01979 Amidohydrolase family M2909_00300 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain M2909_00300 PF00117 Glutamine amidotransferase class-I M2909_00305 PF02142 MGS-like domain M2909_00305 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M2909_00305 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain M2909_00310 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B M2909_00310 PF00970 Oxidoreductase FAD-binding domain M2909_00315 PF01180 Dihydroorotate dehydrogenase M2909_00320 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family M2909_00325 PF00156 Phosphoribosyl transferase domain M2909_00335 PF00999 Sodium/hydrogen exchanger family M2909_00335 PF02080 TrkA-C domain M2909_00335 PF02254 TrkA-N domain M2909_00340 PF12849 PBP superfamily domain M2909_00345 PF00072 Response regulator receiver domain M2909_00345 PF00486 Transcriptional regulatory protein, C terminal M2909_00350 PF18698 Histidine kinase sensor domain M2909_00350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M2909_00350 PF00989 PAS fold M2909_00350 PF00512 His Kinase A (phospho-acceptor) domain M2909_00350 PF00672 HAMP domain M2909_00355 PF00654 Voltage gated chloride channel M2909_00365 PF07687 Peptidase dimerisation domain M2909_00365 PF01546 Peptidase family M20/M25/M40 M2909_00370 PF02390 Putative methyltransferase M2909_00380 PF02378 Phosphotransferase system, EIIC M2909_00380 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit M2909_00385 PF00874 PRD domain M2909_00385 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit M2909_00385 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 M2909_00385 PF05043 Mga helix-turn-helix domain M2909_00385 PF08279 HTH domain M2909_00390 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 M2909_00395 PF01232 Mannitol dehydrogenase Rossmann domain M2909_00395 PF08125 Mannitol dehydrogenase C-terminal domain M2909_00400 PF00528 Binding-protein-dependent transport system inner membrane component M2909_00405 PF00528 Binding-protein-dependent transport system inner membrane component M2909_00410 PF00497 Bacterial extracellular solute-binding proteins, family 3 M2909_00415 PF00005 ABC transporter M2909_00430 PF01757 Acyltransferase family M2909_00435 PF01594 AI-2E family transporter M2909_00440 PF06855 YozE SAM-like fold M2909_00445 PF01625 Peptide methionine sulfoxide reductase M2909_00450 PF09911 Uncharacterized protein conserved in bacteria (DUF2140) M2909_00455 PF13472 GDSL-like Lipase/Acylhydrolase family M2909_00460 PF02645 Uncharacterised protein, DegV family COG1307 M2909_00465 PF03006 Haemolysin-III related M2909_00470 PF01177 Asp/Glu/Hydantoin racemase M2909_00480 PF02875 Mur ligase family, glutamate ligase domain M2909_00480 PF08245 Mur ligase middle domain M2909_00485 PF00733 Asparagine synthase M2909_00485 PF13537 Glutamine amidotransferase domain M2909_00490 PF00186 Dihydrofolate reductase M2909_00495 PF00303 Thymidylate synthase M2909_00500 PF00005 ABC transporter M2909_00500 PF12848 ABC transporter M2909_00500 PF16326 ABC transporter C-terminal domain M2909_00505 PF00128 Alpha amylase, catalytic domain M2909_00505 PF16657 Maltogenic Amylase, C-terminal domain M2909_00510 PF00128 Alpha amylase, catalytic domain M2909_00510 PF16657 Maltogenic Amylase, C-terminal domain M2909_00525 PF13735 tRNA nucleotidyltransferase domain 2 putative M2909_00525 PF01743 Poly A polymerase head domain M2909_00525 PF12627 Probable RNA and SrmB- binding site of polymerase A M2909_00530 PF03819 MazG nucleotide pyrophosphohydrolase domain M2909_00535 PF00309 Sigma-54 factor, Activator interacting domain (AID) M2909_00535 PF04963 Sigma-54 factor, core binding domain M2909_00535 PF04552 Sigma-54, DNA binding domain M2909_00560 PF01047 MarR family M2909_00560 PF00583 Acetyltransferase (GNAT) family M2909_00565 PF02687 FtsX-like permease family M2909_00570 PF00005 ABC transporter M2909_00575 PF00171 Aldehyde dehydrogenase family M2909_00580 PF13419 Haloacid dehalogenase-like hydrolase M2909_00585 PF03636 Glycosyl hydrolase family 65, N-terminal domain M2909_00585 PF03633 Glycosyl hydrolase family 65, C-terminal domain M2909_00585 PF03632 Glycosyl hydrolase family 65 central catalytic domain M2909_00590 PF00528 Binding-protein-dependent transport system inner membrane component M2909_00595 PF00528 Binding-protein-dependent transport system inner membrane component M2909_00600 PF01547 Bacterial extracellular solute-binding protein M2909_00605 PF01546 Peptidase family M20/M25/M40 M2909_00610 PF00085 Thioredoxin M2909_00615 PF05636 HIGH Nucleotidyl Transferase M2909_00620 PF07992 Pyridine nucleotide-disulphide oxidoreductase M2909_00625 PF01554 MatE M2909_00630 PF00005 ABC transporter M2909_00630 PF00664 ABC transporter transmembrane region M2909_00635 PF00005 ABC transporter M2909_00635 PF00664 ABC transporter transmembrane region M2909_00640 PF03672 Uncharacterised protein family (UPF0154) M2909_00645 PF01261 Xylose isomerase-like TIM barrel M2909_00650 PF01479 S4 domain M2909_00650 PF00579 tRNA synthetases class I (W and Y) M2909_00655 PF00905 Penicillin binding protein transpeptidase domain M2909_00655 PF00912 Transglycosylase M2909_00660 PF00356 Bacterial regulatory proteins, lacI family M2909_00665 PF01321 Creatinase/Prolidase N-terminal domain M2909_00665 PF00557 Metallopeptidase family M24 M2909_00670 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) M2909_00675 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment M2909_00675 PF01297 Zinc-uptake complex component A periplasmic M2909_00680 PF00226 DnaJ domain M2909_00680 PF01556 DnaJ C terminal domain M2909_00680 PF00684 DnaJ central domain M2909_00685 PF00012 Hsp70 protein M2909_00690 PF01025 GrpE M2909_00695 PF01628 HrcA protein C terminal domain M2909_00700 PF04055 Radical SAM superfamily M2909_00700 PF06969 HemN C-terminal domain M2909_00705 PF01687 Riboflavin kinase M2909_00705 PF06574 FAD synthetase M2909_00710 PF01509 TruB family pseudouridylate synthase (N terminal domain) M2909_00710 PF16198 tRNA pseudouridylate synthase B C-terminal domain M2909_00715 PF02033 Ribosome-binding factor A M2909_00720 PF00009 Elongation factor Tu GTP binding domain M2909_00720 PF04760 Translation initiation factor IF-2, N-terminal region M2909_00720 PF11987 Translation-initiation factor 2 M2909_00725 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family M2909_00730 PF04296 Protein of unknown function (DUF448) M2909_00735 PF00575 S1 RNA binding domain M2909_00735 PF08529 NusA N-terminal domain M2909_00735 PF13184 NusA-like KH domain M2909_00740 PF17384 RimP C-terminal SH3 domain M2909_00740 PF02576 RimP N-terminal domain M2909_00750 PF00291 Pyridoxal-phosphate dependent enzyme M2909_00755 PF00596 Class II Aldolase and Adducin N-terminal domain M2909_00760 PF01008 Initiation factor 2 subunit family M2909_00765 PF01636 Phosphotransferase enzyme family M2909_00770 PF00689 Cation transporting ATPase, C-terminus M2909_00770 PF00690 Cation transporter/ATPase, N-terminus M2909_00820 PF02899 Phage integrase, N-terminal SAM-like domain M2909_00820 PF00589 Phage integrase family M2909_00825 PF06421 GTP-binding protein LepA C-terminus M2909_00825 PF03144 Elongation factor Tu domain 2 M2909_00825 PF00009 Elongation factor Tu GTP binding domain M2909_00825 PF00679 Elongation factor G C-terminus M2909_00835 PF07724 AAA domain (Cdc48 subfamily) M2909_00835 PF17871 AAA lid domain M2909_00835 PF02861 Clp amino terminal domain, pathogenicity island component M2909_00835 PF10431 C-terminal, D2-small domain, of ClpB protein M2909_00835 PF00004 ATPase family associated with various cellular activities (AAA) M2909_00850 PF07687 Peptidase dimerisation domain M2909_00850 PF01546 Peptidase family M20/M25/M40 M2909_00855 PF01784 NIF3 (NGG1p interacting factor 3) M2909_00860 PF04816 tRNA (adenine(22)-N(1))-methyltransferase M2909_00875 PF04539 Sigma-70 region 3 M2909_00875 PF04545 Sigma-70, region 4 M2909_00875 PF04542 Sigma-70 region 2 M2909_00875 PF00140 Sigma-70 factor, region 1.2 M2909_00875 PF03979 Sigma-70 factor, region 1.1 M2909_00880 PF10410 DnaB-helicase binding domain of primase M2909_00880 PF08275 DNA primase catalytic core, N-terminal domain M2909_00880 PF01807 CHC2 zinc finger M2909_00885 PF02092 Glycyl-tRNA synthetase beta subunit M2909_00885 PF05746 DALR anticodon binding domain M2909_00890 PF02091 Glycyl-tRNA synthetase alpha subunit M2909_00895 PF02565 Recombination protein O C terminal M2909_00895 PF11967 Recombination protein O N terminal M2909_00900 PF07650 KH domain M2909_00900 PF01926 50S ribosome-binding GTPase M2909_00905 PF01219 Prokaryotic diacylglycerol kinase M2909_00910 PF02130 Uncharacterized protein family UPF0054 M2909_00915 PF01966 HD domain M2909_00915 PF07697 7TM-HD extracellular M2909_00915 PF07698 7TM receptor with intracellular HD hydrolase M2909_00920 PF02562 PhoH-like protein M2909_00925 PF04055 Radical SAM superfamily M2909_00930 PF00999 Sodium/hydrogen exchanger family M2909_00940 PF07556 Protein of unknown function (DUF1538) M2909_00945 PF17854 FtsK alpha domain M2909_00945 PF01580 FtsK/SpoIIIE family M2909_00945 PF09397 Ftsk gamma domain M2909_00950 PF01131 DNA topoisomerase M2909_00950 PF01751 Toprim domain M2909_00960 PF03180 NLPA lipoprotein M2909_00965 PF00528 Binding-protein-dependent transport system inner membrane component M2909_00970 PF00005 ABC transporter M2909_00970 PF09383 NIL domain M2909_00975 PF01597 Glycine cleavage H-protein M2909_00980 PF03960 ArsC family M2909_00985 PF01098 Cell cycle protein M2909_01010 PF00464 Serine hydroxymethyltransferase M2909_01015 PF01300 Telomere recombination M2909_01015 PF03481 Putative GTP-binding controlling metal-binding M2909_01020 PF05175 Methyltransferase small domain M2909_01020 PF17827 PrmC N-terminal domain M2909_01025 PF00472 RF-1 domain M2909_01025 PF03462 PCRF domain M2909_01030 PF00265 Thymidine kinase M2909_01035 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase M2909_01040 PF01746 tRNA (Guanine-1)-methyltransferase M2909_01045 PF01782 RimM N-terminal domain M2909_01045 PF05239 PRC-barrel domain M2909_01055 PF00886 Ribosomal protein S16 M2909_01060 PF02978 Signal peptide binding domain M2909_01060 PF00448 SRP54-type protein, GTPase domain M2909_01060 PF02881 SRP54-type protein, helical bundle domain M2909_01065 PF04297 Putative helix-turn-helix protein, YlxM / p13 like M2909_01070 PF00293 NUDIX domain M2909_01075 PF00155 Aminotransferase class I and II M2909_01080 PF03989 DNA gyrase C-terminal domain, beta-propeller M2909_01080 PF00521 DNA gyrase/topoisomerase IV, subunit A M2909_01085 PF00204 DNA gyrase B M2909_01085 PF00986 DNA gyrase B subunit, carboxyl terminus M2909_01085 PF01751 Toprim domain M2909_01085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M2909_01090 PF01168 Alanine racemase, N-terminal domain M2909_01090 PF00842 Alanine racemase, C-terminal domain M2909_01095 PF02660 Glycerol-3-phosphate acyltransferase M2909_01100 PF01262 Alanine dehydrogenase/PNT, C-terminal domain M2909_01100 PF05222 Alanine dehydrogenase/PNT, N-terminal domain M2909_01110 PF06018 CodY GAF-like domain M2909_01110 PF08222 CodY helix-turn-helix domain M2909_01115 PF10431 C-terminal, D2-small domain, of ClpB protein M2909_01115 PF07724 AAA domain (Cdc48 subfamily) M2909_01115 PF00004 ATPase family associated with various cellular activities (AAA) M2909_01120 PF00227 Proteasome subunit M2909_01125 PF00589 Phage integrase family M2909_01125 PF02899 Phage integrase, N-terminal SAM-like domain M2909_01135 PF01134 Glucose inhibited division protein A M2909_01140 PF01131 DNA topoisomerase M2909_01140 PF01751 Toprim domain M2909_01140 PF01396 Topoisomerase DNA binding C4 zinc finger M2909_01145 PF02481 DNA recombination-mediator protein A M2909_01145 PF18255 DNA processing protein A sterile alpha motif domain M2909_01150 PF01351 Ribonuclease HII M2909_01155 PF01926 50S ribosome-binding GTPase M2909_01160 PF10502 Signal peptidase, peptidase S26 M2909_01165 PF17820 PDZ domain M2909_01165 PF03572 Peptidase family S41 M2909_01165 PF01471 Putative peptidoglycan binding domain M2909_01170 PF00224 Pyruvate kinase, barrel domain M2909_01170 PF02887 Pyruvate kinase, alpha/beta domain M2909_01170 PF00391 PEP-utilising enzyme, mobile domain M2909_01175 PF00365 Phosphofructokinase M2909_01180 PF01336 OB-fold nucleic acid binding domain M2909_01180 PF02811 PHP domain M2909_01180 PF14579 Helix-hairpin-helix motif M2909_01180 PF07733 Bacterial DNA polymerase III alpha NTPase domain M2909_01180 PF17657 Bacterial DNA polymerase III alpha subunit finger domain M2909_01190 PF07690 Major Facilitator Superfamily M2909_01195 PF00232 Glycosyl hydrolase family 1 M2909_01200 PF02645 Uncharacterised protein, DegV family COG1307 M2909_01205 PF03816 Cell envelope-related transcriptional attenuator domain M2909_01210 PF01202 Shikimate kinase M2909_01215 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) M2909_01220 PF01264 Chorismate synthase M2909_01225 PF01761 3-dehydroquinate synthase M2909_01230 PF00793 DAHP synthetase I family M2909_01230 PF18152 DAHP synthase ferredoxin-like domain M2909_01235 PF18317 Shikimate 5'-dehydrogenase C-terminal domain M2909_01235 PF08501 Shikimate dehydrogenase substrate binding domain M2909_01250 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain M2909_01250 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain M2909_01255 PF01812 5-formyltetrahydrofolate cyclo-ligase family M2909_01265 PF02347 Glycine cleavage system P-protein M2909_01270 PF02347 Glycine cleavage system P-protein M2909_01275 PF01597 Glycine cleavage H-protein M2909_01280 PF01571 Aminomethyltransferase folate-binding domain M2909_01280 PF08669 Glycine cleavage T-protein C-terminal barrel domain M2909_01295 PF00924 Mechanosensitive ion channel M2909_01300 PF05343 M42 glutamyl aminopeptidase M2909_01305 PF00860 Permease family M2909_01310 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase M2909_01315 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG M2909_01320 PF01039 Carboxyl transferase domain M2909_01325 PF06857 Malonate decarboxylase delta subunit (MdcD) M2909_01330 PF16957 Malonate decarboxylase, alpha subunit, transporter M2909_01335 PF00698 Acyl transferase domain M2909_01340 PF03466 LysR substrate binding domain M2909_01340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M2909_01350 PF00005 ABC transporter M2909_01350 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M2909_01355 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M2909_01355 PF00005 ABC transporter M2909_01360 PF00528 Binding-protein-dependent transport system inner membrane component M2909_01360 PF12911 N-terminal TM domain of oligopeptide transport permease C M2909_01365 PF00528 Binding-protein-dependent transport system inner membrane component M2909_01370 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M2909_01375 PF01546 Peptidase family M20/M25/M40 M2909_01375 PF07687 Peptidase dimerisation domain M2909_01385 PF12850 Calcineurin-like phosphoesterase superfamily domain M2909_01390 PF03725 3' exoribonuclease family, domain 2 M2909_01390 PF01138 3' exoribonuclease family, domain 1 M2909_01395 PF01177 Asp/Glu/Hydantoin racemase M2909_01400 PF03147 Ferredoxin-fold anticodon binding domain M2909_01400 PF03483 B3/4 domain M2909_01400 PF03484 tRNA synthetase B5 domain M2909_01400 PF01588 Putative tRNA binding domain M2909_01400 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain M2909_01405 PF01409 tRNA synthetases class II core domain (F) M2909_01405 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain M2909_01410 PF01638 HxlR-like helix-turn-helix M2909_01420 PF00588 SpoU rRNA Methylase family M2909_01420 PF08032 RNA 2'-O ribose methyltransferase substrate binding M2909_01425 PF00708 Acylphosphatase M2909_01430 PF02096 60Kd inner membrane protein M2909_01440 PF00512 His Kinase A (phospho-acceptor) domain M2909_01440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M2909_01440 PF18719 ArlS sensor domain M2909_01445 PF00486 Transcriptional regulatory protein, C terminal M2909_01445 PF00072 Response regulator receiver domain M2909_01450 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M2909_01450 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain M2909_01455 PF01783 Ribosomal L32p protein family M2909_01465 PF01695 IstB-like ATP binding protein M2909_01465 PF07319 Primosomal protein DnaI N-terminus M2909_01475 PF03477 ATP cone domain M2909_01480 PF01121 Dephospho-CoA kinase M2909_01485 PF06827 Zinc finger found in FPG and IleRS M2909_01485 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain M2909_01485 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain M2909_01490 PF01367 5'-3' exonuclease, C-terminal SAM fold M2909_01490 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain M2909_01490 PF00476 DNA polymerase family A M2909_01495 PF01027 Inhibitor of apoptosis-promoting Bax1 M2909_01500 PF08245 Mur ligase middle domain M2909_01500 PF02875 Mur ligase family, glutamate ligase domain M2909_01500 PF01225 Mur ligase family, catalytic domain M2909_01515 PF01411 tRNA synthetases class II (A) M2909_01515 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain M2909_01515 PF02272 DHHA1 domain M2909_01520 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M2909_01520 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M2909_01520 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M2909_01520 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M2909_01530 PF02457 DisA bacterial checkpoint controller nucleotide-binding M2909_01535 PF10263 SprT-like family M2909_01540 PF16921 Tex protein YqgF-like domain M2909_01540 PF00575 S1 RNA binding domain M2909_01540 PF09371 Tex-like protein N-terminal domain M2909_01540 PF17674 HHH domain M2909_01550 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M2909_01550 PF07992 Pyridine nucleotide-disulphide oxidoreductase M2909_01555 PF02817 e3 binding domain M2909_01555 PF00364 Biotin-requiring enzyme M2909_01555 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M2909_01560 PF02780 Transketolase, C-terminal domain M2909_01560 PF02779 Transketolase, pyrimidine binding domain M2909_01565 PF00676 Dehydrogenase E1 component M2909_01570 PF00689 Cation transporting ATPase, C-terminus M2909_01570 PF00690 Cation transporter/ATPase, N-terminus M2909_01575 PF02386 Cation transport protein M2909_01580 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family M2909_01585 PF00248 Aldo/keto reductase family M2909_01595 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain M2909_01595 PF02222 ATP-grasp domain M2909_01595 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M2909_01600 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase M2909_01600 PF13457 GW (Gly-Tryp) dipeptide domain M2909_01605 PF02557 D-alanyl-D-alanine carboxypeptidase M2909_01615 PF11728 Putative aromatic acid exporter C-terminal domain M2909_01615 PF06081 Aromatic acid exporter family member 1 M2909_01630 PF15975 Flotillin M2909_01630 PF01145 SPFH domain / Band 7 family M2909_01645 PF00005 ABC transporter M2909_01660 PF05066 HB1, ASXL, restriction endonuclease HTH domain M2909_01670 PF03099 Biotin/lipoate A/B protein ligase family M2909_01685 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M2909_01695 PF09424 Yqey-like protein M2909_01700 PF01165 Ribosomal protein S21 M2909_01705 PF01475 Ferric uptake regulator family M2909_01710 PF03618 Kinase/pyrophosphorylase M2909_01715 PF00005 ABC transporter M2909_01720 PF02653 Branched-chain amino acid transport system / permease component M2909_01735 PF05670 NFACT protein RNA binding domain M2909_01740 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV M2909_01790 PF01895 PhoU domain M2909_01795 PF00005 ABC transporter M2909_01800 PF00005 ABC transporter M2909_01805 PF00528 Binding-protein-dependent transport system inner membrane component M2909_01810 PF00528 Binding-protein-dependent transport system inner membrane component M2909_01815 PF12849 PBP superfamily domain M2909_01820 PF02687 FtsX-like permease family M2909_01820 PF18075 FtsX extracellular domain M2909_01825 PF00005 ABC transporter M2909_01835 PF02810 SEC-C motif M2909_01835 PF07517 SecA DEAD-like domain M2909_01835 PF07516 SecA Wing and Scaffold domain M2909_01835 PF01043 SecA preprotein cross-linking domain M2909_01840 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein M2909_01840 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus M2909_01850 PF04851 Type III restriction enzyme, res subunit M2909_01850 PF00271 Helicase conserved C-terminal domain M2909_01855 PF12146 Serine aminopeptidase, S33 M2909_01865 PF01205 Uncharacterized protein family UPF0029 M2909_01865 PF09186 Domain of unknown function (DUF1949) M2909_01870 PF07702 UTRA domain M2909_01870 PF00392 Bacterial regulatory proteins, gntR family M2909_01875 PF13361 UvrD-like helicase C-terminal domain M2909_01875 PF00580 UvrD/REP helicase N-terminal domain M2909_01875 PF12705 PD-(D/E)XK nuclease superfamily M2909_01880 PF12705 PD-(D/E)XK nuclease superfamily M2909_01885 PF10502 Signal peptidase, peptidase S26 M2909_01890 PF00456 Transketolase, thiamine diphosphate binding domain M2909_01890 PF02780 Transketolase, C-terminal domain M2909_01890 PF02779 Transketolase, pyrimidine binding domain M2909_01895 PF05979 Bacterial protein of unknown function (DUF896) M2909_01900 PF00717 Peptidase S24-like M2909_01900 PF01726 LexA DNA binding domain M2909_01910 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus M2909_01910 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus M2909_01915 PF13419 Haloacid dehalogenase-like hydrolase M2909_01920 PF01790 Prolipoprotein diacylglyceryl transferase M2909_01925 PF07475 HPr Serine kinase C-terminal domain M2909_01925 PF02603 HPr Serine kinase N terminus M2909_01955 PF00571 CBS domain M2909_01960 PF00005 ABC transporter M2909_01965 PF12399 Branched-chain amino acid ATP-binding cassette transporter M2909_01965 PF00005 ABC transporter M2909_01970 PF11862 Domain of unknown function (DUF3382) M2909_01970 PF02653 Branched-chain amino acid transport system / permease component M2909_01975 PF02653 Branched-chain amino acid transport system / permease component M2909_01980 PF13458 Periplasmic binding protein M2909_01990 PF01809 Putative membrane protein insertion efficiency factor M2909_02000 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) M2909_02010 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain M2909_02010 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain M2909_02015 PF02874 ATP synthase alpha/beta family, beta-barrel domain M2909_02015 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M2909_02020 PF00231 ATP synthase M2909_02025 PF02874 ATP synthase alpha/beta family, beta-barrel domain M2909_02025 PF00306 ATP synthase alpha/beta chain, C terminal domain M2909_02025 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M2909_02030 PF00213 ATP synthase delta (OSCP) subunit M2909_02035 PF00430 ATP synthase B/B' CF(0) M2909_02040 PF00137 ATP synthase subunit C M2909_02045 PF00119 ATP synthase A chain M2909_02050 PF01668 SmpB protein M2909_02055 PF17876 Cold shock domain M2909_02055 PF00575 S1 RNA binding domain M2909_02055 PF00773 RNB domain M2909_02055 PF08206 Ribonuclease B OB domain M2909_02060 PF12146 Serine aminopeptidase, S33 M2909_02065 PF03840 Preprotein translocase SecG subunit M2909_02070 PF03841 L-seryl-tRNA selenium transferase M2909_02075 PF03144 Elongation factor Tu domain 2 M2909_02075 PF09106 Elongation factor SelB, winged helix M2909_02075 PF09107 Elongation factor SelB, winged helix M2909_02075 PF00009 Elongation factor Tu GTP binding domain M2909_02085 PF02769 AIR synthase related protein, C-terminal domain M2909_02085 PF00586 AIR synthase related protein, N-terminal domain M2909_02105 PF04226 Transglycosylase associated protein M2909_02150 PF00575 S1 RNA binding domain M2909_02155 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD M2909_02160 PF07992 Pyridine nucleotide-disulphide oxidoreductase M2909_02165 PF04608 Phosphatidylglycerophosphatase A M2909_02175 PF13344 Haloacid dehalogenase-like hydrolase M2909_02180 PF06265 Protein of unknown function (DUF1027) M2909_02190 PF13350 Tyrosine phosphatase family M2909_02205 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M2909_02210 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M2909_02210 PF00005 ABC transporter M2909_02215 PF00005 ABC transporter M2909_02215 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M2909_02220 PF00528 Binding-protein-dependent transport system inner membrane component M2909_02220 PF12911 N-terminal TM domain of oligopeptide transport permease C M2909_02225 PF00528 Binding-protein-dependent transport system inner membrane component M2909_02240 PF00210 Ferritin-like domain M2909_02245 PF00085 Thioredoxin M2909_02250 PF01713 Smr domain M2909_02250 PF00488 MutS domain V M2909_02260 PF05164 Cell division protein ZapA M2909_02265 PF01351 Ribonuclease HII M2909_02265 PF11858 Domain of unknown function (DUF3378) M2909_02270 PF06486 Protein of unknown function (DUF1093) M2909_02280 PF00817 impB/mucB/samB family M2909_02280 PF11798 IMS family HHH motif M2909_02280 PF11799 impB/mucB/samB family C-terminal domain M2909_02295 PF06949 Protein of unknown function (DUF1292) M2909_02300 PF03652 Holliday junction resolvase M2909_02305 PF06135 IreB regulatory phosphoprotein M2909_02310 PF14794 Domain of unknown function (DUF4479) M2909_02310 PF01588 Putative tRNA binding domain M2909_02315 PF00582 Universal stress protein family M2909_02320 PF00085 Thioredoxin M2909_02325 PF05343 M42 glutamyl aminopeptidase M2909_02335 PF11975 Family 4 glycosyl hydrolase C-terminal domain M2909_02335 PF02056 Family 4 glycosyl hydrolase M2909_02340 PF01380 SIS domain M2909_02345 PF02378 Phosphotransferase system, EIIC M2909_02350 PF02390 Putative methyltransferase M2909_02355 PF01636 Phosphotransferase enzyme family M2909_02365 PF00005 ABC transporter M2909_02370 PF01230 HIT domain M2909_02380 PF13145 PPIC-type PPIASE domain M2909_02385 PF01966 HD domain M2909_02390 PF06133 Control of competence regulator ComK, YlbF/YmcA M2909_02395 PF00905 Penicillin binding protein transpeptidase domain M2909_02395 PF00912 Transglycosylase M2909_02400 PF00849 RNA pseudouridylate synthase M2909_02400 PF01479 S4 domain M2909_02405 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M2909_02405 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M2909_02405 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M2909_02405 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M2909_02410 PF01316 Arginine repressor, DNA binding domain M2909_02410 PF02863 Arginine repressor, C-terminal domain M2909_02415 PF00750 tRNA synthetases class I (R) M2909_02415 PF05746 DALR anticodon binding domain M2909_02415 PF03485 Arginyl tRNA synthetase N terminal domain M2909_02420 PF06177 QueT transporter M2909_02430 PF00005 ABC transporter M2909_02435 PF04069 Substrate binding domain of ABC-type glycine betaine transport system M2909_02440 PF00528 Binding-protein-dependent transport system inner membrane component M2909_02445 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M2909_02445 PF07992 Pyridine nucleotide-disulphide oxidoreductase M2909_02450 PF04143 Sulphur transport M2909_02455 PF03466 LysR substrate binding domain M2909_02455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M2909_02460 PF00781 Diacylglycerol kinase catalytic domain M2909_02465 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain M2909_02465 PF14490 Helix-hairpin-helix containing domain M2909_02465 PF13538 UvrD-like helicase C-terminal domain M2909_02470 PF05362 Lon protease (S16) C-terminal proteolytic domain M2909_02470 PF13180 PDZ domain M2909_02475 PF01467 Cytidylyltransferase-like M2909_02485 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) M2909_02500 PF00289 Biotin carboxylase, N-terminal domain M2909_02500 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M2909_02500 PF00682 HMGL-like M2909_02500 PF02436 Conserved carboxylase domain M2909_02500 PF02785 Biotin carboxylase C-terminal domain M2909_02500 PF00364 Biotin-requiring enzyme M2909_02505 PF01098 Cell cycle protein M2909_02510 PF07408 Protein of unknown function (DUF1507) M2909_02515 PF06125 Bacterial protein of unknown function (DUF961) M2909_02535 PF02486 Replication initiation factor M2909_02535 PF18106 Rolling Circle replication initiation protein N-terminal domain M2909_02565 PF00877 NlpC/P60 family M2909_02580 PF14492 Elongation Factor G, domain II M2909_02580 PF03764 Elongation factor G, domain IV M2909_02580 PF00009 Elongation factor Tu GTP binding domain M2909_02580 PF00679 Elongation factor G C-terminus M2909_02610 PF09035 Excisionase from transposon Tn916 M2909_02615 PF02920 DNA binding domain of tn916 integrase M2909_02615 PF00589 Phage integrase family M2909_02620 PF14537 Cytochrome c3 M2909_02620 PF00890 FAD binding domain M2909_02625 PF01226 Formate/nitrite transporter M2909_02630 PF03180 NLPA lipoprotein M2909_02635 PF00528 Binding-protein-dependent transport system inner membrane component M2909_02640 PF09383 NIL domain M2909_02640 PF00005 ABC transporter M2909_02645 PF03070 TENA/THI-4/PQQC family M2909_02650 PF09084 NMT1/THI5 like M2909_02655 PF00528 Binding-protein-dependent transport system inner membrane component M2909_02660 PF00005 ABC transporter M2909_02670 PF02581 Thiamine monophosphate synthase M2909_02675 PF08543 Phosphomethylpyrimidine kinase M2909_02680 PF02110 Hydroxyethylthiazole kinase family M2909_02685 PF06689 ClpX C4-type zinc finger M2909_02685 PF07724 AAA domain (Cdc48 subfamily) M2909_02685 PF10431 C-terminal, D2-small domain, of ClpB protein M2909_02690 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M2909_02690 PF05698 Bacterial trigger factor protein (TF) C-terminus M2909_02690 PF05697 Bacterial trigger factor protein (TF) M2909_02700 PF06271 RDD family M2909_02705 PF01343 Peptidase family S49 M2909_02710 PF08796 Protein of unknown function (DUF1797) M2909_02715 PF01301 Glycosyl hydrolases family 35 M2909_02720 PF03610 PTS system fructose IIA component M2909_02725 PF03613 PTS system mannose/fructose/sorbose family IID component M2909_02730 PF03609 PTS system sorbose-specific iic component M2909_02735 PF03830 PTS system sorbose subfamily IIB component M2909_02740 PF00294 pfkB family carbohydrate kinase M2909_02745 PF01791 DeoC/LacD family aldolase M2909_02750 PF01380 SIS domain M2909_02755 PF00392 Bacterial regulatory proteins, gntR family M2909_02755 PF07702 UTRA domain M2909_02760 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase M2909_02760 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M2909_02770 PF13439 Glycosyltransferase Family 4 M2909_02770 PF00534 Glycosyl transferases group 1 M2909_02775 PF00534 Glycosyl transferases group 1 M2909_02775 PF13439 Glycosyltransferase Family 4 M2909_02780 PF02896 PEP-utilising enzyme, TIM barrel domain M2909_02780 PF00391 PEP-utilising enzyme, mobile domain M2909_02780 PF05524 PEP-utilising enzyme, N-terminal M2909_02785 PF00381 PTS HPr component phosphorylation site M2909_02795 PF17871 AAA lid domain M2909_02795 PF07724 AAA domain (Cdc48 subfamily) M2909_02795 PF00004 ATPase family associated with various cellular activities (AAA) M2909_02795 PF10431 C-terminal, D2-small domain, of ClpB protein M2909_02805 PF06838 Methionine gamma-lyase M2909_02810 PF16360 GTP-binding GTPase Middle Region M2909_02810 PF01926 50S ribosome-binding GTPase M2909_02810 PF13167 GTP-binding GTPase N-terminal M2909_02820 PF03009 Glycerophosphoryl diester phosphodiesterase family M2909_02830 PF00313 'Cold-shock' DNA-binding domain M2909_02835 PF04002 RadC-like JAB domain M2909_02840 PF13419 Haloacid dehalogenase-like hydrolase M2909_02845 PF08245 Mur ligase middle domain M2909_02845 PF02875 Mur ligase family, glutamate ligase domain M2909_02850 PF00133 tRNA synthetases class I (I, L, M and V) M2909_02850 PF08264 Anticodon-binding domain of tRNA M2909_02850 PF10458 Valyl tRNA synthetase tRNA binding arm M2909_02855 PF08534 Redoxin M2909_02860 PF02629 CoA binding domain M2909_02860 PF06971 Putative DNA-binding protein N-terminus M2909_02865 PF02568 Thiamine biosynthesis protein (ThiI) M2909_02865 PF02926 THUMP domain M2909_02870 PF00266 Aminotransferase class-V M2909_02875 PF06160 Septation ring formation regulator, EzrA M2909_02885 PF01904 Protein of unknown function DUF72 M2909_02890 PF17763 Glutaminase/Asparaginase C-terminal domain M2909_02890 PF00710 Asparaginase, N-terminal M2909_02900 PF00342 Phosphoglucose isomerase M2909_02905 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain M2909_02905 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase M2909_02920 PF12833 Helix-turn-helix domain M2909_02925 PF07690 Major Facilitator Superfamily M2909_02930 PF01546 Peptidase family M20/M25/M40 M2909_02930 PF07687 Peptidase dimerisation domain M2909_02935 PF04073 Aminoacyl-tRNA editing domain M2909_02940 PF01487 Type I 3-dehydroquinase M2909_02945 PF17785 PUA-like domain M2909_02945 PF10672 S-adenosylmethionine-dependent methyltransferase M2909_02950 PF00884 Sulfatase M2909_02960 PF00528 Binding-protein-dependent transport system inner membrane component M2909_02965 PF00497 Bacterial extracellular solute-binding proteins, family 3 M2909_02970 PF01425 Amidase M2909_02975 PF00884 Sulfatase M2909_02980 PF02540 NAD synthase M2909_02985 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family M2909_02985 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain M2909_02985 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain M2909_02990 PF00588 SpoU rRNA Methylase family M2909_02995 PF08241 Methyltransferase domain M2909_03000 PF03932 CutC family M2909_03005 PF00571 CBS domain M2909_03005 PF01769 Divalent cation transporter M2909_03005 PF03448 MgtE intracellular N domain M2909_03010 PF00849 RNA pseudouridylate synthase M2909_03015 PF01513 ATP-NAD kinase M2909_03020 PF04607 Region found in RelA / SpoT proteins M2909_03025 PF01928 CYTH domain M2909_03035 PF16658 Class II release factor RF3, C-terminal domain M2909_03035 PF03144 Elongation factor Tu domain 2 M2909_03035 PF00009 Elongation factor Tu GTP binding domain M2909_03040 PF01022 Bacterial regulatory protein, arsR family M2909_03045 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M2909_03045 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M2909_03045 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M2909_03045 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M2909_03050 PF12704 MacB-like periplasmic core domain M2909_03050 PF02687 FtsX-like permease family M2909_03050 PF00005 ABC transporter M2909_03055 PF00005 ABC transporter M2909_03055 PF12704 MacB-like periplasmic core domain M2909_03055 PF02687 FtsX-like permease family M2909_03065 PF00313 'Cold-shock' DNA-binding domain M2909_03070 PF13407 Periplasmic binding protein domain M2909_03075 PF02653 Branched-chain amino acid transport system / permease component M2909_03080 PF00005 ABC transporter M2909_03085 PF05025 RbsD / FucU transport protein family M2909_03090 PF00294 pfkB family carbohydrate kinase M2909_03095 PF00356 Bacterial regulatory proteins, lacI family M2909_03100 PF05738 Cna protein B-type domain M2909_03100 PF05737 Collagen binding domain M2909_03100 PF17802 Prealbumin-like fold domain M2909_03110 PF00571 CBS domain M2909_03110 PF03471 Transporter associated domain M2909_03110 PF01595 Cyclin M transmembrane N-terminal domain M2909_03115 PF01594 AI-2E family transporter M2909_03135 PF04167 Protein of unknown function (DUF402) M2909_03155 PF04203 Sortase domain M2909_03175 PF09924 Uncharacterised conserved protein (DUF2156) M2909_03175 PF03706 Lysylphosphatidylglycerol synthase TM region M2909_03180 PF00730 HhH-GPD superfamily base excision DNA repair protein M2909_03180 PF14815 NUDIX domain M2909_03185 PF02631 RecX family M2909_03210 PF01370 NAD dependent epimerase/dehydratase family M2909_03215 PF02350 UDP-N-acetylglucosamine 2-epimerase M2909_03225 PF00483 Nucleotidyl transferase M2909_03230 PF03816 Cell envelope-related transcriptional attenuator domain M2909_03235 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain M2909_03235 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain M2909_03235 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain M2909_03240 PF01262 Alanine dehydrogenase/PNT, C-terminal domain M2909_03240 PF05222 Alanine dehydrogenase/PNT, N-terminal domain M2909_03255 PF01501 Glycosyl transferase family 8 M2909_03255 PF08437 Glycosyl transferase family 8 C-terminal M2909_03275 PF02350 UDP-N-acetylglucosamine 2-epimerase M2909_03280 PF01370 NAD dependent epimerase/dehydratase family M2909_03285 PF08485 Polysaccharide biosynthesis protein C-terminal M2909_03285 PF02719 Polysaccharide biosynthesis protein M2909_03300 PF02397 Bacterial sugar transferase M2909_03305 PF02719 Polysaccharide biosynthesis protein M2909_03315 PF13614 AAA domain M2909_03320 PF02706 Chain length determinant protein M2909_03320 PF13807 G-rich domain on putative tyrosine kinase M2909_03350 PF00535 Glycosyl transferase family 2 M2909_03350 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase M2909_03355 PF01467 Cytidylyltransferase-like M2909_03360 PF00535 Glycosyl transferase family 2 M2909_03360 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase M2909_03365 PF01467 Cytidylyltransferase-like M2909_03370 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase M2909_03375 PF01061 ABC-2 type transporter M2909_03380 PF03808 Glycosyl transferase WecB/TagA/CpsF family M2909_03385 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase M2909_03390 PF00005 ABC transporter M2909_03395 PF03816 Cell envelope-related transcriptional attenuator domain M2909_03400 PF00953 Glycosyl transferase family 4 M2909_03405 PF03631 Virulence factor BrkB M2909_03410 PF00557 Metallopeptidase family M24 M2909_03415 PF00258 Flavodoxin M2909_03425 PF02073 Thermophilic metalloprotease (M29) M2909_03450 PF02378 Phosphotransferase system, EIIC M2909_03455 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit M2909_03460 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit M2909_03465 PF00874 PRD domain M2909_03465 PF03610 PTS system fructose IIA component M2909_03465 PF00158 Sigma-54 interaction domain M2909_03470 PF00271 Helicase conserved C-terminal domain M2909_03470 PF00270 DEAD/DEAH box helicase M2909_03475 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M2909_03475 PF02894 Oxidoreductase family, C-terminal alpha/beta domain M2909_03485 PF00664 ABC transporter transmembrane region M2909_03485 PF00005 ABC transporter M2909_03490 PF00664 ABC transporter transmembrane region M2909_03490 PF00005 ABC transporter M2909_03495 PF07288 Protein of unknown function (DUF1447) M2909_03500 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain M2909_03500 PF17770 Ribonuclease J C-terminal domain M2909_03500 PF00753 Metallo-beta-lactamase superfamily M2909_03505 PF00581 Rhodanese-like domain M2909_03510 PF00480 ROK family M2909_03515 PF01694 Rhomboid family M2909_03525 PF00471 Ribosomal protein L33 M2909_03530 PF00905 Penicillin binding protein transpeptidase domain M2909_03530 PF03717 Penicillin-binding Protein dimerisation domain M2909_03535 PF03129 Anticodon binding domain M2909_03535 PF02824 TGS domain M2909_03535 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M2909_03535 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain M2909_03540 PF00013 KH domain M2909_03540 PF00575 S1 RNA binding domain M2909_03540 PF03725 3' exoribonuclease family, domain 2 M2909_03540 PF01138 3' exoribonuclease family, domain 1 M2909_03540 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain M2909_03545 PF00312 Ribosomal protein S15 M2909_03550 PF01327 Polypeptide deformylase M2909_03555 PF00485 Phosphoribulokinase / Uridine kinase family M2909_03555 PF16875 Glycosyl hydrolase family 36 N-terminal domain M2909_03555 PF16874 Glycosyl hydrolase family 36 C-terminal domain M2909_03560 PF02311 AraC-like ligand binding domain M2909_03560 PF12833 Helix-turn-helix domain M2909_03570 PF02872 5'-nucleotidase, C-terminal domain M2909_03570 PF00149 Calcineurin-like phosphoesterase M2909_03575 PF01418 Helix-turn-helix domain, rpiR family M2909_03575 PF01380 SIS domain M2909_03580 PF10415 Fumarase C C-terminus M2909_03580 PF00206 Lyase M2909_03585 PF03949 Malic enzyme, NAD binding domain M2909_03585 PF00390 Malic enzyme, N-terminal domain M2909_03590 PF00206 Lyase M2909_03590 PF10397 Adenylosuccinate lyase C-terminus M2909_03595 PF00367 phosphotransferase system, EIIB M2909_03595 PF02378 Phosphotransferase system, EIIC M2909_03600 PF00248 Aldo/keto reductase family M2909_03605 PF00962 Adenosine/AMP deaminase M2909_03610 PF00528 Binding-protein-dependent transport system inner membrane component M2909_03615 PF00005 ABC transporter M2909_03615 PF08402 TOBE domain M2909_03625 PF12833 Helix-turn-helix domain M2909_03625 PF00072 Response regulator receiver domain M2909_03630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M2909_03630 PF06580 Histidine kinase M2909_03635 PF00118 TCP-1/cpn60 chaperonin family M2909_03640 PF00166 Chaperonin 10 Kd subunit M2909_03645 PF02629 CoA binding domain M2909_03645 PF06971 Putative DNA-binding protein N-terminus M2909_03650 PF00005 ABC transporter M2909_03650 PF12848 ABC transporter M2909_03650 PF16326 ABC transporter C-terminal domain M2909_03655 PF00356 Bacterial regulatory proteins, lacI family M2909_03665 PF01368 DHH family M2909_03665 PF02272 DHHA1 domain M2909_03670 PF03061 Thioesterase superfamily M2909_03670 PF00392 Bacterial regulatory proteins, gntR family M2909_03670 PF07085 DRTGG domain M2909_03670 PF00571 CBS domain M2909_03675 PF07690 Major Facilitator Superfamily M2909_03680 PF17770 Ribonuclease J C-terminal domain M2909_03680 PF00753 Metallo-beta-lactamase superfamily M2909_03680 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain M2909_03685 PF00005 ABC transporter M2909_03685 PF00664 ABC transporter transmembrane region M2909_03690 PF00176 SNF2 family N-terminal domain M2909_03690 PF12419 SNF2 Helicase protein M2909_03690 PF00271 Helicase conserved C-terminal domain M2909_03695 PF01553 Acyltransferase M2909_03700 PF05175 Methyltransferase small domain M2909_03705 PF01541 GIY-YIG catalytic domain M2909_03730 PF02082 Transcriptional regulator M2909_03735 PF03606 C4-dicarboxylate anaerobic carrier M2909_03740 PF02733 Dak1 domain M2909_03745 PF02734 DAK2 domain M2909_03750 PF03610 PTS system fructose IIA component M2909_03755 PF00465 Iron-containing alcohol dehydrogenase M2909_03760 PF02733 Dak1 domain M2909_03765 PF14278 Transcriptional regulator C-terminal region M2909_03765 PF00440 Bacterial regulatory proteins, tetR family M2909_03775 PF00293 NUDIX domain M2909_03780 PF05857 TraX protein M2909_03785 PF01791 DeoC/LacD family aldolase M2909_03790 PF04198 Putative sugar-binding domain M2909_03795 PF07992 Pyridine nucleotide-disulphide oxidoreductase M2909_03795 PF13192 Thioredoxin domain M2909_03800 PF00578 AhpC/TSA family M2909_03805 PF00370 FGGY family of carbohydrate kinases, N-terminal domain M2909_03805 PF02782 FGGY family of carbohydrate kinases, C-terminal domain M2909_03810 PF00230 Major intrinsic protein M2909_03815 PF01266 FAD dependent oxidoreductase M2909_03815 PF16901 C-terminal domain of alpha-glycerophosphate oxidase M2909_03820 PF02803 Thiolase, C-terminal domain M2909_03820 PF00108 Thiolase, N-terminal domain M2909_03825 PF00005 ABC transporter M2909_03830 PF02687 FtsX-like permease family M2909_03835 PF01906 Putative heavy-metal-binding M2909_03840 PF00753 Metallo-beta-lactamase superfamily M2909_03850 PF11799 impB/mucB/samB family C-terminal domain M2909_03850 PF00817 impB/mucB/samB family M2909_03995 PF01336 OB-fold nucleic acid binding domain M2909_03995 PF00152 tRNA synthetases class II (D, K and N) M2909_04000 PF01207 Dihydrouridine synthase (Dus) M2909_04005 PF01430 Hsp33 protein M2909_04010 PF00004 ATPase family associated with various cellular activities (AAA) M2909_04010 PF17862 AAA+ lid domain M2909_04010 PF06480 FtsH Extracellular M2909_04010 PF01434 Peptidase family M41 M2909_04015 PF00156 Phosphoribosyl transferase domain M2909_04020 PF11734 TilS substrate C-terminal domain M2909_04020 PF01171 PP-loop family M2909_04025 PF00575 S1 RNA binding domain M2909_04035 PF01479 S4 domain M2909_04040 PF01943 Polysaccharide biosynthesis protein M2909_04040 PF14667 Polysaccharide biosynthesis C-terminal domain M2909_04045 PF02559 CarD-like/TRCF domain M2909_04045 PF00270 DEAD/DEAH box helicase M2909_04045 PF00271 Helicase conserved C-terminal domain M2909_04045 PF03461 TRCF domain M2909_04045 PF17757 UvrB interaction domain M2909_04050 PF01195 Peptidyl-tRNA hydrolase M2909_04060 PF00462 Glutaredoxin M2909_04065 PF07972 NrdI Flavodoxin like M2909_04070 PF00317 Ribonucleotide reductase, all-alpha domain M2909_04070 PF08343 Ribonucleotide reductase N-terminal M2909_04070 PF02867 Ribonucleotide reductase, barrel domain M2909_04075 PF00268 Ribonucleotide reductase, small chain M2909_04085 PF04127 DNA / pantothenate metabolism flavoprotein M2909_04085 PF02441 Flavoprotein M2909_04090 PF02441 Flavoprotein M2909_04095 PF12822 ECF transporter, substrate-specific component M2909_04100 PF05389 Negative regulator of genetic competence (MecA) M2909_04105 PF03960 ArsC family M2909_04110 PF00579 tRNA synthetases class I (W and Y) M2909_04115 PF03099 Biotin/lipoate A/B protein ligase family M2909_04115 PF10437 Bacterial lipoate protein ligase C-terminus M2909_04120 PF12706 Beta-lactamase superfamily domain M2909_04125 PF05343 M42 glutamyl aminopeptidase M2909_04135 PF13597 Anaerobic ribonucleoside-triphosphate reductase M2909_04135 PF03477 ATP cone domain M2909_04140 PF00453 Ribosomal protein L20 M2909_04145 PF01632 Ribosomal protein L35 M2909_04150 PF05198 Translation initiation factor IF-3, N-terminal domain M2909_04150 PF00707 Translation initiation factor IF-3, C-terminal domain M2909_04155 PF03167 Uracil DNA glycosylase superfamily M2909_04160 PF00132 Bacterial transferase hexapeptide (six repeats) M2909_04170 PF02525 Flavodoxin-like fold M2909_04175 PF08240 Alcohol dehydrogenase GroES-like domain M2909_04175 PF00107 Zinc-binding dehydrogenase M2909_04180 PF01432 Peptidase family M3 M2909_04180 PF08439 Oligopeptidase F M2909_04190 PF00860 Permease family M2909_04200 PF00485 Phosphoribulokinase / Uridine kinase family M2909_04205 PF08331 Domain of unknown function (DUF1730) M2909_04215 PF00690 Cation transporter/ATPase, N-terminus M2909_04215 PF00689 Cation transporting ATPase, C-terminus M2909_04325 PF03496 ADP-ribosyltransferase exoenzyme M2909_04325 PF04233 Phage Mu protein F like protein M2909_04355 PF00436 Single-strand binding protein family M2909_04415 PF01695 IstB-like ATP binding protein M2909_04455 PF01726 LexA DNA binding domain M2909_04455 PF00717 Peptidase S24-like M2909_04470 PF02796 Helix-turn-helix domain of resolvase M2909_04470 PF00239 Resolvase, N terminal domain M2909_04475 PF00482 Type II secretion system (T2SS), protein F M2909_04480 PF00437 Type II/IV secretion system protein M2909_04485 PF01709 Transcriptional regulator M2909_04490 PF03601 Conserved hypothetical protein 698 M2909_04495 PF05991 YacP-like NYN domain M2909_04500 PF08032 RNA 2'-O ribose methyltransferase substrate binding M2909_04500 PF00588 SpoU rRNA Methylase family M2909_04505 PF00636 Ribonuclease III domain M2909_04510 PF01406 tRNA synthetases class I (C) catalytic domain M2909_04510 PF09190 DALR domain M2909_04515 PF00132 Bacterial transferase hexapeptide (six repeats) M2909_04515 PF06426 Serine acetyltransferase, N-terminal M2909_04520 PF00749 tRNA synthetases class I (E and Q), catalytic domain M2909_04530 PF18073 Rubredoxin metal binding domain M2909_04535 PF00692 dUTPase M2909_04540 PF02583 Metal-sensitive transcriptional repressor M2909_04545 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M2909_04545 PF07992 Pyridine nucleotide-disulphide oxidoreductase M2909_04550 PF00581 Rhodanese-like domain M2909_04555 PF00849 RNA pseudouridylate synthase M2909_04555 PF01479 S4 domain M2909_04560 PF14667 Polysaccharide biosynthesis C-terminal domain M2909_04560 PF01943 Polysaccharide biosynthesis protein M2909_04565 PF05343 M42 glutamyl aminopeptidase M2909_04575 PF06335 Protein of unknown function (DUF1054) M2909_04580 PF13302 Acetyltransferase (GNAT) domain M2909_04585 PF00793 DAHP synthetase I family M2909_04585 PF01817 Chorismate mutase type II M2909_04590 PF02146 Sir2 family M2909_04600 PF01546 Peptidase family M20/M25/M40 M2909_04605 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) M2909_04605 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 M2909_04610 PF01336 OB-fold nucleic acid binding domain M2909_04610 PF00152 tRNA synthetases class II (D, K and N) M2909_04610 PF02938 GAD domain M2909_04615 PF03129 Anticodon binding domain M2909_04615 PF13393 Histidyl-tRNA synthetase M2909_04620 PF01520 N-acetylmuramoyl-L-alanine amidase M2909_04620 PF08239 Bacterial SH3 domain M2909_04625 PF02580 D-Tyr-tRNA(Tyr) deacylase M2909_04630 PF04607 Region found in RelA / SpoT proteins M2909_04630 PF13291 ACT domain M2909_04630 PF02824 TGS domain M2909_04645 PF00005 ABC transporter M2909_04655 PF04452 RNA methyltransferase M2909_04670 PF12002 MgsA AAA+ ATPase C terminal M2909_04670 PF05496 Holliday junction DNA helicase RuvB P-loop domain M2909_04670 PF16193 AAA C-terminal domain M2909_04685 PF00582 Universal stress protein family M2909_04690 PF07992 Pyridine nucleotide-disulphide oxidoreductase M2909_04690 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M2909_04695 PF00149 Calcineurin-like phosphoesterase M2909_04695 PF02872 5'-nucleotidase, C-terminal domain M2909_04700 PF00528 Binding-protein-dependent transport system inner membrane component M2909_04705 PF00528 Binding-protein-dependent transport system inner membrane component M2909_04710 PF00005 ABC transporter M2909_04720 PF03051 Peptidase C1-like family M2909_04735 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) M2909_04735 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 M2909_04745 PF02535 ZIP Zinc transporter M2909_04750 PF09515 Thiamine transporter protein (Thia_YuaJ) M2909_04755 PF00893 Small Multidrug Resistance protein M2909_04760 PF00893 Small Multidrug Resistance protein M2909_04770 PF00480 ROK family M2909_04775 PF01238 Phosphomannose isomerase type I M2909_04790 PF00528 Binding-protein-dependent transport system inner membrane component M2909_04795 PF00528 Binding-protein-dependent transport system inner membrane component M2909_04825 PF00232 Glycosyl hydrolase family 1 M2909_04830 PF00583 Acetyltransferase (GNAT) family M2909_04845 PF00963 Cohesin domain M2909_04845 PF00754 F5/8 type C domain M2909_04845 PF00041 Fibronectin type III domain M2909_04845 PF02838 Glycosyl hydrolase family 20, domain 2 M2909_04845 PF07555 beta-N-acetylglucosaminidase M2909_04850 PF02836 Glycosyl hydrolases family 2, TIM barrel domain M2909_04850 PF02837 Glycosyl hydrolases family 2, sugar binding domain M2909_04850 PF00703 Glycosyl hydrolases family 2 M2909_04850 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 M2909_04860 PF12848 ABC transporter M2909_04860 PF16326 ABC transporter C-terminal domain M2909_04860 PF00005 ABC transporter M2909_04870 PF07690 Major Facilitator Superfamily M2909_04880 PF04002 RadC-like JAB domain M2909_04895 PF00817 impB/mucB/samB family M2909_04895 PF11798 IMS family HHH motif M2909_04895 PF11799 impB/mucB/samB family C-terminal domain M2909_04905 PF13538 UvrD-like helicase C-terminal domain M2909_04915 PF01268 Formate--tetrahydrofolate ligase M2909_04920 PF04892 VanZ like family M2909_04925 PF01207 Dihydrouridine synthase (Dus) M2909_04930 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family M2909_04955 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) M2909_04955 PF18766 SWI2/SNF2 ATPase M2909_04955 PF12008 Type I restriction and modification enzyme - subunit R C terminal M2909_04965 PF12161 HsdM N-terminal domain M2909_04965 PF02384 N-6 DNA Methylase M2909_04995 PF02899 Phage integrase, N-terminal SAM-like domain M2909_04995 PF00589 Phage integrase family M2909_05015 PF07728 AAA domain (dynein-related subfamily) M2909_05025 PF02086 D12 class N6 adenine-specific DNA methyltransferase M2909_05035 PF12564 Type III restriction/modification enzyme methylation subunit M2909_05040 PF12161 HsdM N-terminal domain M2909_05040 PF02384 N-6 DNA Methylase M2909_05050 PF00380 Ribosomal protein S9/S16 M2909_05055 PF00572 Ribosomal protein L13 M2909_05060 PF01416 tRNA pseudouridine synthase M2909_05065 PF02361 Cobalt transport protein M2909_05070 PF00005 ABC transporter M2909_05075 PF00005 ABC transporter M2909_05080 PF01196 Ribosomal protein L17 M2909_05085 PF01000 RNA polymerase Rpb3/RpoA insert domain M2909_05085 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain M2909_05085 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain M2909_05090 PF00411 Ribosomal protein S11 M2909_05095 PF00416 Ribosomal protein S13/S18 M2909_05100 PF00444 Ribosomal protein L36 M2909_05105 PF01176 Translation initiation factor 1A / IF-1 M2909_05110 PF05191 Adenylate kinase, active site lid M2909_05115 PF00344 SecY translocase M2909_05120 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A M2909_05125 PF00327 Ribosomal protein L30p/L7e M2909_05130 PF00333 Ribosomal protein S5, N-terminal domain M2909_05130 PF03719 Ribosomal protein S5, C-terminal domain M2909_05135 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast M2909_05140 PF00347 Ribosomal protein L6 M2909_05145 PF00410 Ribosomal protein S8 M2909_05150 PF00253 Ribosomal protein S14p/S29e M2909_05155 PF00281 Ribosomal protein L5 M2909_05155 PF00673 ribosomal L5P family C-terminus M2909_05160 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 M2909_05160 PF00467 KOW motif M2909_05165 PF00238 Ribosomal protein L14p/L23e M2909_05170 PF00366 Ribosomal protein S17 M2909_05175 PF00831 Ribosomal L29 protein M2909_05180 PF00252 Ribosomal protein L16p/L10e M2909_05185 PF07650 KH domain M2909_05185 PF00189 Ribosomal protein S3, C-terminal domain M2909_05190 PF00237 Ribosomal protein L22p/L17e M2909_05195 PF00203 Ribosomal protein S19 M2909_05200 PF00181 Ribosomal Proteins L2, RNA binding domain M2909_05200 PF03947 Ribosomal Proteins L2, C-terminal domain M2909_05205 PF00276 Ribosomal protein L23 M2909_05210 PF00573 Ribosomal protein L4/L1 family M2909_05215 PF00297 Ribosomal protein L3 M2909_05220 PF00338 Ribosomal protein S10p/S20e M2909_05230 PF00009 Elongation factor Tu GTP binding domain M2909_05230 PF03144 Elongation factor Tu domain 2 M2909_05230 PF03143 Elongation factor Tu C-terminal domain M2909_05235 PF00009 Elongation factor Tu GTP binding domain M2909_05235 PF03144 Elongation factor Tu domain 2 M2909_05235 PF03764 Elongation factor G, domain IV M2909_05235 PF00679 Elongation factor G C-terminus M2909_05235 PF14492 Elongation Factor G, domain II M2909_05240 PF00177 Ribosomal protein S7p/S5e M2909_05245 PF00164 Ribosomal protein S12/S23 M2909_05250 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) M2909_05255 PF01048 Phosphorylase superfamily M2909_05260 PF01048 Phosphorylase superfamily M2909_05265 PF01676 Metalloenzyme superfamily M2909_05270 PF02653 Branched-chain amino acid transport system / permease component M2909_05275 PF02653 Branched-chain amino acid transport system / permease component M2909_05280 PF00005 ABC transporter M2909_05285 PF02608 ABC transporter substrate-binding protein PnrA-like M2909_05290 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region M2909_05295 PF02885 Glycosyl transferase family, helical bundle domain M2909_05295 PF00591 Glycosyl transferase family, a/b domain M2909_05295 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain M2909_05300 PF00356 Bacterial regulatory proteins, lacI family M2909_05310 PF02653 Branched-chain amino acid transport system / permease component M2909_05315 PF00005 ABC transporter M2909_05315 PF09383 NIL domain M2909_05320 PF02237 Biotin protein ligase C terminal domain M2909_05320 PF03099 Biotin/lipoate A/B protein ligase family M2909_05320 PF08279 HTH domain M2909_05330 PF02424 ApbE family M2909_05335 PF04205 FMN-binding domain M2909_05340 PF07992 Pyridine nucleotide-disulphide oxidoreductase M2909_05350 PF00348 Polyprenyl synthetase M2909_05355 PF12848 ABC transporter M2909_05355 PF00005 ABC transporter M2909_05365 PF03796 DnaB-like helicase C terminal domain M2909_05365 PF00772 DnaB-like helicase N terminal domain M2909_05370 PF01281 Ribosomal protein L9, N-terminal domain M2909_05370 PF03948 Ribosomal protein L9, C-terminal domain M2909_05375 PF01084 Ribosomal protein S18 M2909_05380 PF00436 Single-strand binding protein family M2909_05385 PF01250 Ribosomal protein S6 M2909_05390 PF03989 DNA gyrase C-terminal domain, beta-propeller M2909_05390 PF00521 DNA gyrase/topoisomerase IV, subunit A M2909_05395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M2909_05395 PF01751 Toprim domain M2909_05395 PF00204 DNA gyrase B M2909_05395 PF00986 DNA gyrase B subunit, carboxyl terminus M2909_05400 PF02463 RecF/RecN/SMC N terminal domain M2909_05425 PF04962 KduI/IolB family M2909_05430 PF09339 IclR helix-turn-helix domain M2909_05430 PF01614 Bacterial transcriptional regulator M2909_05435 PF01081 KDPG and KHG aldolase M2909_05440 PF00294 pfkB family carbohydrate kinase M2909_05445 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain M2909_05445 PF02278 Polysaccharide lyase family 8, super-sandwich domain M2909_05445 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain M2909_05460 PF03613 PTS system mannose/fructose/sorbose family IID component M2909_05465 PF03609 PTS system sorbose-specific iic component M2909_05475 PF07470 Glycosyl Hydrolase Family 88 M2909_05480 PF07702 UTRA domain M2909_05480 PF00392 Bacterial regulatory proteins, gntR family M2909_05485 PF02767 DNA polymerase III beta subunit, central domain M2909_05485 PF00712 DNA polymerase III beta subunit, N-terminal domain M2909_05485 PF02768 DNA polymerase III beta subunit, C-terminal domain M2909_05490 PF00308 Bacterial dnaA protein M2909_05490 PF08299 Bacterial dnaA protein helix-turn-helix M2909_05495 PF00468 Ribosomal protein L34 M2909_05500 PF00825 Ribonuclease P M2909_05505 PF02096 60Kd inner membrane protein M2909_05515 PF01926 50S ribosome-binding GTPase M2909_05515 PF12631 MnmE helical domain M2909_05515 PF10396 GTP-binding protein TrmE N-terminus M2909_05520 PF13932 GidA associated domain M2909_05520 PF01134 Glucose inhibited division protein A M2909_05535 PF02527 rRNA small subunit methyltransferase G M2909_05540 PF13614 AAA domain M2909_05545 PF17762 HTH domain found in ParB protein M2909_05545 PF02195 ParB-like nuclease domain M2909_05550 PF06107 Bacterial protein of unknown function (DUF951) M2909_05555 PF01926 50S ribosome-binding GTPase M2909_05555 PF06071 Protein of unknown function (DUF933) M2909_05565 PF00478 IMP dehydrogenase / GMP reductase domain M2909_05565 PF00571 CBS domain M2909_05570 PF02796 Helix-turn-helix domain of resolvase M2909_05570 PF00239 Resolvase, N terminal domain M2909_05615 PF02796 Helix-turn-helix domain of resolvase M2909_05615 PF00239 Resolvase, N terminal domain M2909_05620 PF02403 Seryl-tRNA synthetase N-terminal domain M2909_05620 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M2909_05625 PF07943 Penicillin-binding protein 5, C-terminal domain M2909_05625 PF00768 D-alanyl-D-alanine carboxypeptidase M2909_05630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M2909_05630 PF00512 His Kinase A (phospho-acceptor) domain M2909_05635 PF00072 Response regulator receiver domain M2909_05635 PF00486 Transcriptional regulatory protein, C terminal M2909_05640 PF00300 Histidine phosphatase superfamily (branch 1) M2909_05700 PF05848 CtsR N-terminal HTH domain M2909_05700 PF17727 CtsR C-terminal dimerization domain M2909_05705 PF00004 ATPase family associated with various cellular activities (AAA) M2909_05705 PF07724 AAA domain (Cdc48 subfamily) M2909_05705 PF17871 AAA lid domain M2909_05705 PF02861 Clp amino terminal domain, pathogenicity island component M2909_05705 PF10431 C-terminal, D2-small domain, of ClpB protein M2909_05715 PF01136 Peptidase family U32 M2909_05715 PF16325 Peptidase family U32 C-terminal domain M2909_05725 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M2909_05725 PF07992 Pyridine nucleotide-disulphide oxidoreductase M2909_05730 PF01654 Cytochrome bd terminal oxidase subunit I M2909_05735 PF02322 Cytochrome bd terminal oxidase subunit II M2909_05740 PF00664 ABC transporter transmembrane region M2909_05740 PF00005 ABC transporter M2909_05745 PF00664 ABC transporter transmembrane region M2909_05745 PF00005 ABC transporter M2909_05755 PF00348 Polyprenyl synthetase M2909_05775 PF01515 Phosphate acetyl/butaryl transferase M2909_05780 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE M2909_05785 PF02872 5'-nucleotidase, C-terminal domain M2909_05785 PF17936 Bacterial Ig domain M2909_05785 PF00149 Calcineurin-like phosphoesterase M2909_05795 PF14579 Helix-hairpin-helix motif M2909_05795 PF17657 Bacterial DNA polymerase III alpha subunit finger domain M2909_05795 PF07733 Bacterial DNA polymerase III alpha NTPase domain M2909_05795 PF00929 Exonuclease M2909_05795 PF14480 DNA polymerase III polC-type N-terminus I M2909_05795 PF02811 PHP domain M2909_05795 PF11490 DNA polymerase III polC-type N-terminus II M2909_05800 PF03372 Endonuclease/Exonuclease/phosphatase family M2909_05805 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain M2909_05805 PF01565 FAD binding domain M2909_05810 PF00107 Zinc-binding dehydrogenase M2909_05810 PF08240 Alcohol dehydrogenase GroES-like domain M2909_05820 PF00005 ABC transporter M2909_05820 PF08402 TOBE domain M2909_05825 PF00528 Binding-protein-dependent transport system inner membrane component M2909_05830 PF00528 Binding-protein-dependent transport system inner membrane component M2909_05835 PF13416 Bacterial extracellular solute-binding protein M2909_05840 PF00288 GHMP kinases N terminal domain M2909_05840 PF08544 GHMP kinases C terminal M2909_05845 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 M2909_05845 PF02378 Phosphotransferase system, EIIC M2909_05845 PF00367 phosphotransferase system, EIIB M2909_05855 PF01297 Zinc-uptake complex component A periplasmic M2909_05860 PF00950 ABC 3 transport family M2909_05865 PF00005 ABC transporter M2909_05870 PF00005 ABC transporter M2909_05875 PF00950 ABC 3 transport family M2909_05880 PF09182 Bacterial purine repressor, N-terminal M2909_05880 PF00156 Phosphoribosyl transferase domain M2909_05885 PF00132 Bacterial transferase hexapeptide (six repeats) M2909_05885 PF00483 Nucleotidyl transferase M2909_05890 PF14572 Phosphoribosyl synthetase-associated domain M2909_05890 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase M2909_05895 PF01741 Large-conductance mechanosensitive channel, MscL M2909_05900 PF05193 Peptidase M16 inactive domain M2909_05905 PF00675 Insulinase (Peptidase family M16) M2909_05905 PF05193 Peptidase M16 inactive domain M2909_05915 PF13464 Domain of unknown function (DUF4115) M2909_05920 PF01066 CDP-alcohol phosphatidyltransferase M2909_05925 PF02464 Competence-damaged protein M2909_05925 PF18146 Damage-inducible protein CinA KH domain M2909_05925 PF00994 Probable molybdopterin binding domain M2909_05930 PF00154 recA bacterial DNA recombination protein M2909_05935 PF01966 HD domain M2909_05935 PF00013 KH domain M2909_05935 PF12072 Domain of unknown function (DUF3552) M2909_05955 PF00313 'Cold-shock' DNA-binding domain M2909_05970 PF13580 SIS domain M2909_05975 PF00367 phosphotransferase system, EIIB M2909_05975 PF02378 Phosphotransferase system, EIIC M2909_05980 PF13419 Haloacid dehalogenase-like hydrolase M2909_05985 PF01418 Helix-turn-helix domain, rpiR family M2909_05985 PF01380 SIS domain M2909_05990 PF13538 UvrD-like helicase C-terminal domain M2909_05995 PF00486 Transcriptional regulatory protein, C terminal M2909_05995 PF00072 Response regulator receiver domain M2909_06000 PF13426 PAS domain M2909_06000 PF00512 His Kinase A (phospho-acceptor) domain M2909_06000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M2909_06000 PF00672 HAMP domain M2909_06015 PF00753 Metallo-beta-lactamase superfamily M2909_06020 PF13180 PDZ domain M2909_06025 PF02590 Predicted SPOUT methyltransferase M2909_06030 PF10941 Protein of unknown function DUF2620 M2909_06035 PF10797 Protein of unknown function M2909_06045 PF00155 Aminotransferase class I and II M2909_06050 PF14502 Helix-turn-helix domain M2909_06050 PF14503 YhfZ C-terminal domain M2909_06060 PF01168 Alanine racemase, N-terminal domain M2909_06065 PF01676 Metalloenzyme superfamily M2909_06075 PF02798 Glutathione S-transferase, N-terminal domain M2909_06085 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region M2909_06095 PF00367 phosphotransferase system, EIIB M2909_06095 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 M2909_06095 PF02378 Phosphotransferase system, EIIC M2909_06100 PF03123 CAT RNA binding domain M2909_06100 PF00874 PRD domain M2909_06105 PF00232 Glycosyl hydrolase family 1 M2909_06115 PF02308 MgtC family M2909_06120 PF07690 Major Facilitator Superfamily M2909_06125 PF00158 Sigma-54 interaction domain M2909_06125 PF03610 PTS system fructose IIA component M2909_06125 PF00874 PRD domain M2909_06130 PF03610 PTS system fructose IIA component M2909_06130 PF03830 PTS system sorbose subfamily IIB component M2909_06135 PF03610 PTS system fructose IIA component M2909_06135 PF03830 PTS system sorbose subfamily IIB component M2909_06140 PF03609 PTS system sorbose-specific iic component M2909_06145 PF03613 PTS system mannose/fructose/sorbose family IID component M2909_06180 PF07155 ECF-type riboflavin transporter, S component M2909_06185 PF12558 ATP-binding cassette cobalt transporter M2909_06185 PF00005 ABC transporter M2909_06200 PF00860 Permease family M2909_06205 PF01979 Amidohydrolase family M2909_06215 PF00149 Calcineurin-like phosphoesterase M2909_06215 PF02872 5'-nucleotidase, C-terminal domain M2909_06220 PF04138 GtrA-like protein M2909_06225 PF00535 Glycosyl transferase family 2 M2909_06235 PF00005 ABC transporter M2909_06240 PF03649 Uncharacterised protein family (UPF0014) M2909_06250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M2909_06250 PF03466 LysR substrate binding domain M2909_06255 PF00106 short chain dehydrogenase M2909_06260 PF00874 PRD domain M2909_06260 PF05043 Mga helix-turn-helix domain M2909_06260 PF08279 HTH domain M2909_06260 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 M2909_06270 PF03608 PTS system enzyme II sorbitol-specific factor M2909_06275 PF03612 Sorbitol phosphotransferase enzyme II N-terminus M2909_06275 PF07663 Sorbitol phosphotransferase enzyme II C-terminus M2909_06285 PF00923 Transaldolase/Fructose-6-phosphate aldolase M2909_06295 PF01926 50S ribosome-binding GTPase M2909_06295 PF10396 GTP-binding protein TrmE N-terminus M2909_06295 PF12631 MnmE helical domain M2909_06305 PF13460 NAD(P)H-binding M2909_06310 PF01638 HxlR-like helix-turn-helix M2909_06315 PF00156 Phosphoribosyl transferase domain M2909_06320 PF00860 Permease family M2909_06325 PF00367 phosphotransferase system, EIIB M2909_06325 PF02378 Phosphotransferase system, EIIC M2909_06330 PF00367 phosphotransferase system, EIIB M2909_06330 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 M2909_06330 PF02378 Phosphotransferase system, EIIC M2909_06335 PF01613 Flavin reductase like domain M2909_06340 PF13407 Periplasmic binding protein domain M2909_06340 PF00356 Bacterial regulatory proteins, lacI family M2909_06345 PF02378 Phosphotransferase system, EIIC M2909_06345 PF00367 phosphotransferase system, EIIB M2909_06350 PF08244 Glycosyl hydrolases family 32 C terminal M2909_06350 PF00251 Glycosyl hydrolases family 32 N-terminal domain M2909_06355 PF03611 PTS system sugar-specific permease component M2909_06380 PF00155 Aminotransferase class I and II M2909_06385 PF01370 NAD dependent epimerase/dehydratase family M2909_06395 PF00465 Iron-containing alcohol dehydrogenase M2909_06400 PF09261 Alpha mannosidase middle domain M2909_06400 PF17677 Glycosyl hydrolases family 38 C-terminal beta sandwich domain M2909_06400 PF18438 Glycosyl hydrolases family 38 C-terminal domain 1 M2909_06400 PF07748 Glycosyl hydrolases family 38 C-terminal domain M2909_06400 PF01074 Glycosyl hydrolases family 38 N-terminal domain M2909_06410 PF00392 Bacterial regulatory proteins, gntR family M2909_06430 PF12368 Rhodanase C-terminal M2909_06430 PF00581 Rhodanese-like domain M2909_06430 PF17773 UPF0176 acylphosphatase like domain M2909_06435 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain M2909_06435 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain M2909_06440 PF02245 Methylpurine-DNA glycosylase (MPG) M2909_06450 PF11495 Archaeal transcriptional regulator TrmB M2909_06450 PF01978 Sugar-specific transcriptional regulator TrmB M2909_06460 PF02423 Ornithine cyclodeaminase/mu-crystallin family M2909_06465 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit M2909_06465 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 M2909_06470 PF00294 pfkB family carbohydrate kinase M2909_06475 PF08220 DeoR-like helix-turn-helix domain M2909_06475 PF00455 DeoR C terminal sensor domain M2909_06480 PF13277 YmdB-like protein M2909_06490 PF01624 MutS domain I M2909_06490 PF05192 MutS domain III M2909_06490 PF05190 MutS family domain IV M2909_06490 PF00488 MutS domain V M2909_06490 PF05188 MutS domain II M2909_06495 PF08676 MutL C terminal dimerisation domain M2909_06495 PF01119 DNA mismatch repair protein, C-terminal domain M2909_06500 PF02545 Maf-like protein M2909_06505 PF01641 SelR domain M2909_06510 PF01418 Helix-turn-helix domain, rpiR family M2909_06510 PF01380 SIS domain M2909_06515 PF08903 Domain of unknown function (DUF1846) M2909_06520 PF01966 HD domain M2909_06530 PF03788 LrgA family M2909_06535 PF04172 LrgB-like family M2909_06540 PF00571 CBS domain M2909_06540 PF08279 HTH domain M2909_06545 PF03618 Kinase/pyrophosphorylase M2909_06550 PF00781 Diacylglycerol kinase catalytic domain M2909_06565 PF00072 Response regulator receiver domain M2909_06565 PF00486 Transcriptional regulatory protein, C terminal M2909_06570 PF00672 HAMP domain M2909_06570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M2909_06570 PF00512 His Kinase A (phospho-acceptor) domain M2909_06575 PF05256 Uncharacterised protein family (UPF0223) M2909_06580 PF00459 Inositol monophosphatase family M2909_06585 PF03144 Elongation factor Tu domain 2 M2909_06585 PF00679 Elongation factor G C-terminus M2909_06585 PF14492 Elongation Factor G, domain II M2909_06585 PF00009 Elongation factor Tu GTP binding domain M2909_06595 PF02558 Ketopantoate reductase PanE/ApbA M2909_06595 PF08546 Ketopantoate reductase PanE/ApbA C terminal M2909_06605 PF00171 Aldehyde dehydrogenase family M2909_06610 PF01116 Fructose-bisphosphate aldolase class-II M2909_06625 PF10282 Lactonase, 7-bladed beta-propeller M2909_06635 PF01594 AI-2E family transporter M2909_06645 PF02525 Flavodoxin-like fold M2909_06655 PF07694 5TMR of 5TMR-LYT M2909_06655 PF00990 Diguanylate cyclase, GGDEF domain M2909_06665 PF03831 PhnA domain M2909_06665 PF08274 PhnA Zinc-Ribbon M2909_06670 PF04298 Putative neutral zinc metallopeptidase M2909_06680 PF13556 PucR C-terminal helix-turn-helix domain M2909_06685 PF14437 MafB19-like deaminase M2909_06710 PF12169 DNA polymerase III subunits gamma and tau domain III M2909_06715 PF02575 YbaB/EbfC DNA-binding family M2909_06720 PF02132 RecR protein M2909_06720 PF13662 Toprim domain M2909_06725 PF02223 Thymidylate kinase M2909_06730 PF06153 Cyclic-di-AMP receptor M2909_06735 PF09115 DNA polymerase III, delta subunit, C terminal M2909_06740 PF04468 PSP1 C-terminal conserved region M2909_06745 PF06156 Initiation control protein YabA M2909_06750 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases M2909_06785 PF00005 ABC transporter M2909_06785 PF00664 ABC transporter transmembrane region M2909_06790 PF00005 ABC transporter M2909_06790 PF00664 ABC transporter transmembrane region M2909_06795 PF04260 Protein of unknown function (DUF436) M2909_06800 PF01386 Ribosomal L25p family M2909_06800 PF14693 Ribosomal protein TL5, C-terminal domain M2909_06805 PF00005 ABC transporter M2909_06810 PF00528 Binding-protein-dependent transport system inner membrane component M2909_06820 PF13514 AAA domain M2909_06830 PF00163 Ribosomal protein S4/S9 N-terminal domain M2909_06830 PF01479 S4 domain M2909_06835 PF07664 Ferrous iron transport protein B C terminus M2909_06835 PF17910 FeoB cytosolic helical domain M2909_06835 PF02421 Ferrous iron transport protein B M2909_06835 PF07670 Nucleoside recognition M2909_06845 PF10531 SLBB domain M2909_06850 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region M2909_06855 PF03772 Competence protein M2909_06855 PF00753 Metallo-beta-lactamase superfamily M2909_06855 PF13567 Domain of unknown function (DUF4131) M2909_06860 PF06144 DNA polymerase III, delta subunit M2909_06865 PF01649 Ribosomal protein S20 M2909_06870 PF01384 Phosphate transporter family M2909_06875 PF01865 Protein of unknown function DUF47 M2909_06885 PF02673 Bacitracin resistance protein BacA M2909_06890 PF12833 Helix-turn-helix domain M2909_06895 PF02894 Oxidoreductase family, C-terminal alpha/beta domain M2909_06895 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M2909_06905 PF01261 Xylose isomerase-like TIM barrel M2909_06910 PF02894 Oxidoreductase family, C-terminal alpha/beta domain M2909_06910 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M2909_06915 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain M2909_06915 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain M2909_06920 PF02742 Iron dependent repressor, metal binding and dimerisation domain M2909_06920 PF18357 Diphteria toxin repressor SH3 domain M2909_06920 PF01325 Iron dependent repressor, N-terminal DNA binding domain M2909_06935 PF00005 ABC transporter M2909_06935 PF00571 CBS domain M2909_06940 PF00528 Binding-protein-dependent transport system inner membrane component M2909_06945 PF04069 Substrate binding domain of ABC-type glycine betaine transport system M2909_06950 PF00528 Binding-protein-dependent transport system inner membrane component M2909_06955 PF00155 Aminotransferase class I and II M2909_06960 PF01066 CDP-alcohol phosphatidyltransferase M2909_06970 PF01979 Amidohydrolase family M2909_06975 PF14602 Hexapeptide repeat of succinyl-transferase M2909_06975 PF12464 Maltose acetyltransferase M2909_06990 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain M2909_06990 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M2909_06995 PF01380 SIS domain M2909_06995 PF01418 Helix-turn-helix domain, rpiR family M2909_07000 PF00391 PEP-utilising enzyme, mobile domain M2909_07000 PF02896 PEP-utilising enzyme, TIM barrel domain M2909_07000 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain M2909_07005 PF03009 Glycerophosphoryl diester phosphodiesterase family M2909_07010 PF08264 Anticodon-binding domain of tRNA M2909_07010 PF09334 tRNA synthetases class I (M) M2909_07010 PF01588 Putative tRNA binding domain M2909_07015 PF01026 TatD related DNase M2909_07020 PF13331 Domain of unknown function (DUF4093) M2909_07020 PF01751 Toprim domain M2909_07025 PF00398 Ribosomal RNA adenine dimethylase M2909_07030 PF00005 ABC transporter M2909_07030 PF17912 MalK OB fold domain M2909_07030 PF03459 TOBE domain M2909_07035 PF02142 MGS-like domain M2909_07040 PF12822 ECF transporter, substrate-specific component M2909_07045 PF02384 N-6 DNA Methylase M2909_07050 PF00871 Acetokinase family M2909_07055 PF01032 FecCD transport family M2909_07060 PF01032 FecCD transport family M2909_07065 PF00005 ABC transporter M2909_07070 PF01497 Periplasmic binding protein M2909_07090 PF14552 Tautomerase enzyme M2909_07095 PF00455 DeoR C terminal sensor domain M2909_07095 PF08220 DeoR-like helix-turn-helix domain M2909_07100 PF00171 Aldehyde dehydrogenase family M2909_07105 PF04962 KduI/IolB family M2909_07110 PF00294 pfkB family carbohydrate kinase M2909_07115 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M2909_07115 PF00205 Thiamine pyrophosphate enzyme, central domain M2909_07115 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M2909_07120 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M2909_07120 PF02894 Oxidoreductase family, C-terminal alpha/beta domain M2909_07125 PF01261 Xylose isomerase-like TIM barrel M2909_07130 PF00474 Sodium:solute symporter family M2909_07135 PF02894 Oxidoreductase family, C-terminal alpha/beta domain M2909_07135 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M2909_07145 PF01330 RuvA N terminal domain M2909_07145 PF07499 RuvA, C-terminal domain M2909_07150 PF17864 RuvB AAA lid domain M2909_07150 PF05491 RuvB C-terminal winged helix domain M2909_07150 PF05496 Holliday junction DNA helicase RuvB P-loop domain M2909_07155 PF02547 Queuosine biosynthesis protein M2909_07160 PF01702 Queuine tRNA-ribosyltransferase M2909_07165 PF02699 Preprotein translocase subunit M2909_07175 PF00465 Iron-containing alcohol dehydrogenase M2909_07175 PF00171 Aldehyde dehydrogenase family M2909_07190 PF00877 NlpC/P60 family M2909_07195 PF13520 Amino acid permease M2909_07200 PF01432 Peptidase family M3 M2909_07200 PF08439 Oligopeptidase F M2909_07210 PF06257 Biofilm formation stimulator VEG M2909_07215 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 M2909_07215 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) M2909_07220 PF07702 UTRA domain M2909_07220 PF00392 Bacterial regulatory proteins, gntR family M2909_07225 PF01546 Peptidase family M20/M25/M40 M2909_07230 PF01112 Asparaginase M2909_07240 PF00480 ROK family M2909_07245 PF05958 tRNA (Uracil-5-)-methyltransferase M2909_07245 PF01938 TRAM domain M2909_07250 PF00156 Phosphoribosyl transferase domain M2909_07260 PF01061 ABC-2 type transporter M2909_07265 PF02082 Transcriptional regulator M2909_07270 PF07702 UTRA domain M2909_07270 PF00392 Bacterial regulatory proteins, gntR family M2909_07275 PF16657 Maltogenic Amylase, C-terminal domain M2909_07275 PF00128 Alpha amylase, catalytic domain M2909_07280 PF00367 phosphotransferase system, EIIB M2909_07280 PF02378 Phosphotransferase system, EIIC M2909_07290 PF00005 ABC transporter M2909_07305 PF13411 MerR HTH family regulatory protein M2909_07310 PF00300 Histidine phosphatase superfamily (branch 1) M2909_07315 PF00392 Bacterial regulatory proteins, gntR family M2909_07315 PF07702 UTRA domain M2909_07320 PF00232 Glycosyl hydrolase family 1 M2909_07325 PF01464 Transglycosylase SLT domain M2909_07325 PF10145 Phage-related minor tail protein M2909_07325 PF01551 Peptidase family M23 M2909_07335 PF01522 Polysaccharide deacetylase M2909_07335 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain M2909_07340 PF00253 Ribosomal protein S14p/S29e M2909_07355 PF00158 Sigma-54 interaction domain M2909_07355 PF02954 Bacterial regulatory protein, Fis family M2909_07355 PF01590 GAF domain M2909_07360 PF07992 Pyridine nucleotide-disulphide oxidoreductase M2909_07360 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M2909_07365 PF00676 Dehydrogenase E1 component M2909_07370 PF02779 Transketolase, pyrimidine binding domain M2909_07370 PF02780 Transketolase, C-terminal domain M2909_07375 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M2909_07375 PF00364 Biotin-requiring enzyme M2909_07375 PF02817 e3 binding domain M2909_07380 PF07969 Amidohydrolase family M2909_07385 PF13520 Amino acid permease M2909_07400 PF00005 ABC transporter M2909_07445 PF14659 Phage integrase, N-terminal SAM-like domain M2909_07445 PF00589 Phage integrase family M2909_07455 PF00117 Glutamine amidotransferase class-I M2909_07455 PF00958 GMP synthase C terminal domain M2909_07455 PF02540 NAD synthase M2909_07460 PF00485 Phosphoribulokinase / Uridine kinase family M2909_07465 PF03061 Thioesterase superfamily M2909_07475 PF05175 Methyltransferase small domain M2909_07480 PF00318 Ribosomal protein S2 M2909_07485 PF00889 Elongation factor TS M2909_07490 PF00696 Amino acid kinase family M2909_07495 PF01765 Ribosome recycling factor M2909_07500 PF00654 Voltage gated chloride channel M2909_07505 PF01255 Putative undecaprenyl diphosphate synthase M2909_07515 PF17820 PDZ domain M2909_07515 PF02163 Peptidase family M50 M2909_07520 PF03129 Anticodon binding domain M2909_07520 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M2909_07520 PF04073 Aminoacyl-tRNA editing domain M2909_07525 PF14480 DNA polymerase III polC-type N-terminus I M2909_07525 PF07733 Bacterial DNA polymerase III alpha NTPase domain M2909_07525 PF17657 Bacterial DNA polymerase III alpha subunit finger domain M2909_07525 PF14579 Helix-hairpin-helix motif M2909_07525 PF02811 PHP domain M2909_07525 PF00929 Exonuclease M2909_07525 PF11490 DNA polymerase III polC-type N-terminus II M2909_07530 PF01475 Ferric uptake regulator family M2909_07610 PF01541 GIY-YIG catalytic domain M2909_07610 PF02151 UvrB/uvrC motif M2909_07610 PF08459 UvrC Helix-hairpin-helix N-terminal M2909_07620 PF00005 ABC transporter M2909_07620 PF13732 Domain of unknown function (DUF4162) M2909_07630 PF00580 UvrD/REP helicase N-terminal domain M2909_07630 PF13361 UvrD-like helicase C-terminal domain M2909_07635 PF00533 BRCA1 C Terminus (BRCT) domain M2909_07635 PF03120 NAD-dependent DNA ligase OB-fold domain M2909_07635 PF03119 NAD-dependent DNA ligase C4 zinc finger domain M2909_07635 PF12826 Helix-hairpin-helix motif M2909_07635 PF01653 NAD-dependent DNA ligase adenylation domain M2909_07640 PF02686 Glu-tRNAGln amidotransferase C subunit M2909_07645 PF01425 Amidase M2909_07650 PF02934 GatB/GatE catalytic domain M2909_07650 PF02637 GatB domain M2909_07655 PF00781 Diacylglycerol kinase catalytic domain M2909_07660 PF01938 TRAM domain M2909_07660 PF05958 tRNA (Uracil-5-)-methyltransferase M2909_07675 PF08241 Methyltransferase domain M2909_07680 PF04439 Streptomycin adenylyltransferase M2909_07685 PF00156 Phosphoribosyl transferase domain M2909_07690 PF01909 Nucleotidyltransferase domain M2909_07690 PF13427 Domain of unknown function (DUF4111) M2909_07705 PF13545 Crp-like helix-turn-helix domain M2909_07705 PF00027 Cyclic nucleotide-binding domain M2909_07710 PF04405 Domain of Unknown function (DUF542) M2909_07710 PF01814 Hemerythrin HHE cation binding domain M2909_07715 PF00403 Heavy-metal-associated domain M2909_07720 PF00403 Heavy-metal-associated domain M2909_07725 PF05525 Branched-chain amino acid transport protein M2909_07735 PF00005 ABC transporter M2909_07735 PF00664 ABC transporter transmembrane region M2909_07740 PF00005 ABC transporter M2909_07740 PF00664 ABC transporter transmembrane region M2909_07750 PF07943 Penicillin-binding protein 5, C-terminal domain M2909_07750 PF00768 D-alanyl-D-alanine carboxypeptidase M2909_07755 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) M2909_07760 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M2909_07760 PF07498 Rho termination factor, N-terminal domain M2909_07760 PF07497 Rho termination factor, RNA-binding domain M2909_07765 PF01197 Ribosomal protein L31 M2909_07770 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase M2909_07770 PF01476 LysM domain M2909_07775 PF01263 Aldose 1-epimerase M2909_07780 PF06874 Firmicute fructose-1,6-bisphosphatase M2909_07785 PF13649 Methyltransferase domain M2909_07790 PF00582 Universal stress protein family M2909_07810 PF00829 Ribosomal prokaryotic L21 protein M2909_07820 PF01016 Ribosomal L27 protein M2909_07825 PF01321 Creatinase/Prolidase N-terminal domain M2909_07825 PF00557 Metallopeptidase family M24 M2909_07830 PF01132 Elongation factor P (EF-P) OB domain M2909_07830 PF08207 Elongation factor P (EF-P) KOW-like domain M2909_07830 PF09285 Elongation factor P, C-terminal M2909_07835 PF03780 Asp23 family, cell envelope-related function M2909_07840 PF01029 NusB family M2909_07845 PF13742 OB-fold nucleic acid binding domain M2909_07845 PF02601 Exonuclease VII, large subunit M2909_07850 PF02609 Exonuclease VII small subunit M2909_07855 PF00348 Polyprenyl synthetase M2909_07860 PF01479 S4 domain M2909_07860 PF01728 FtsJ-like methyltransferase M2909_07865 PF02863 Arginine repressor, C-terminal domain M2909_07865 PF01316 Arginine repressor, DNA binding domain M2909_07870 PF02463 RecF/RecN/SMC N terminal domain M2909_07885 PF02381 MraZ protein, putative antitoxin-like M2909_07890 PF01795 MraW methylase family M2909_07900 PF03793 PASTA domain M2909_07900 PF00905 Penicillin binding protein transpeptidase domain M2909_07900 PF03717 Penicillin-binding Protein dimerisation domain M2909_07905 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 M2909_07905 PF00953 Glycosyl transferase family 4 M2909_07910 PF02875 Mur ligase family, glutamate ligase domain M2909_07910 PF08245 Mur ligase middle domain M2909_07915 PF04101 Glycosyltransferase family 28 C-terminal domain M2909_07915 PF03033 Glycosyltransferase family 28 N-terminal domain M2909_07920 PF03799 Cell division protein FtsQ M2909_07925 PF11983 Membrane-attachment and polymerisation-promoting switch M2909_07925 PF02491 SHS2 domain inserted in FTSA M2909_07930 PF12327 FtsZ family, C-terminal domain M2909_07930 PF00091 Tubulin/FtsZ family, GTPase domain M2909_07935 PF01168 Alanine racemase, N-terminal domain M2909_07940 PF04472 Cell division protein SepF M2909_07950 PF01479 S4 domain M2909_07950 PF17774 Putative RNA-binding domain in YlmH M2909_07955 PF05103 DivIVA protein M2909_07960 PF06827 Zinc finger found in FPG and IleRS M2909_07960 PF00133 tRNA synthetases class I (I, L, M and V) M2909_07960 PF08264 Anticodon-binding domain of tRNA M2909_07990 PF00271 Helicase conserved C-terminal domain M2909_07990 PF00270 DEAD/DEAH box helicase M2909_07990 PF18019 HD domain M2909_08000 PF00471 Ribosomal protein L33 M2909_08010 PF02357 Transcription termination factor nusG M2909_08010 PF00467 KOW motif M2909_08015 PF06865 Pyrimidine/purine nucleoside phosphorylase M2909_08020 PF03807 NADP oxidoreductase coenzyme F420-dependent M2909_08020 PF14748 Pyrroline-5-carboxylate reductase dimerisation M2909_08025 PF04055 Radical SAM superfamily M2909_08035 PF02901 Pyruvate formate lyase-like M2909_08035 PF01228 Glycine radical M2909_08045 PF03313 Serine dehydratase alpha chain M2909_08050 PF01842 ACT domain M2909_08050 PF03315 Serine dehydratase beta chain M2909_08055 PF00298 Ribosomal protein L11, RNA binding domain M2909_08055 PF03946 Ribosomal protein L11, N-terminal domain M2909_08060 PF00687 Ribosomal protein L1p/L10e family M2909_08065 PF00466 Ribosomal protein L10 M2909_08070 PF00542 Ribosomal protein L7/L12 C-terminal domain M2909_08070 PF16320 Ribosomal protein L7/L12 dimerisation domain M2909_08080 PF02773 S-adenosylmethionine synthetase, C-terminal domain M2909_08080 PF02772 S-adenosylmethionine synthetase, central domain M2909_08080 PF00438 S-adenosylmethionine synthetase, N-terminal domain M2909_08085 PF07690 Major Facilitator Superfamily M2909_08090 PF06962 Putative rRNA methylase M2909_08095 PF16199 Radical_SAM C-terminal domain M2909_08095 PF04055 Radical SAM superfamily M2909_08100 PF01569 PAP2 superfamily M2909_08115 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase M2909_08115 PF01476 LysM domain M2909_08120 PF08264 Anticodon-binding domain of tRNA M2909_08120 PF00133 tRNA synthetases class I (I, L, M and V) M2909_08120 PF13603 Leucyl-tRNA synthetase, Domain 2 M2909_08120 PF09334 tRNA synthetases class I (M) M2909_08125 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 M2909_08130 PF01451 Low molecular weight phosphotyrosine protein phosphatase M2909_08135 PF04203 Sortase domain M2909_08145 PF07478 D-ala D-ala ligase C-terminus M2909_08145 PF01820 D-ala D-ala ligase N-terminus M2909_08150 PF02875 Mur ligase family, glutamate ligase domain M2909_08150 PF08245 Mur ligase middle domain M2909_08150 PF01225 Mur ligase family, catalytic domain M2909_08155 PF00270 DEAD/DEAH box helicase M2909_08155 PF00271 Helicase conserved C-terminal domain M2909_08160 PF01648 4'-phosphopantetheinyl transferase superfamily M2909_08175 PF02229 Transcriptional Coactivator p15 (PC4) M2909_08180 PF08340 Domain of unknown function (DUF1732) M2909_08180 PF03755 YicC-like family, N-terminal region M2909_08185 PF00625 Guanylate kinase M2909_08190 PF01192 RNA polymerase Rpb6 M2909_08195 PF00271 Helicase conserved C-terminal domain M2909_08195 PF17764 3′ DNA-binding domain (3′BD) M2909_08195 PF18074 Primosomal protein N C-terminal domain M2909_08195 PF18319 PriA DNA helicase Cys-rich region (CRR) domain M2909_08195 PF04851 Type III restriction enzyme, res subunit M2909_08200 PF01327 Polypeptide deformylase M2909_08205 PF02911 Formyl transferase, C-terminal domain M2909_08205 PF00551 Formyl transferase M2909_08210 PF01189 16S rRNA methyltransferase RsmB/F M2909_08210 PF01029 NusB family M2909_08220 PF03793 PASTA domain M2909_08220 PF00069 Protein kinase domain M2909_08225 PF02683 Cytochrome C biogenesis protein transmembrane region M2909_08235 PF03193 RsgA GTPase M2909_08235 PF16745 RsgA N-terminal domain M2909_08240 PF00834 Ribulose-phosphate 3 epimerase family M2909_08245 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain M2909_08245 PF04263 Thiamin pyrophosphokinase, catalytic domain M2909_08250 PF00830 Ribosomal L28 family M2909_08255 PF03780 Asp23 family, cell envelope-related function M2909_08260 PF13684 Dihydroxyacetone kinase family M2909_08260 PF02734 DAK2 domain M2909_08265 PF00270 DEAD/DEAH box helicase M2909_08265 PF00271 Helicase conserved C-terminal domain M2909_08265 PF17191 RecG wedge domain M2909_08270 PF02504 Fatty acid synthesis protein M2909_08275 PF00550 Phosphopantetheine attachment site M2909_08280 PF00005 ABC transporter M2909_08280 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M2909_08285 PF00005 ABC transporter M2909_08285 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M2909_08290 PF00528 Binding-protein-dependent transport system inner membrane component M2909_08295 PF00528 Binding-protein-dependent transport system inner membrane component M2909_08300 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M2909_08305 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M2909_08310 PF00035 Double-stranded RNA binding motif M2909_08310 PF14622 Ribonuclease-III-like M2909_08315 PF06470 SMC proteins Flexible Hinge Domain M2909_08315 PF02463 RecF/RecN/SMC N terminal domain M2909_08325 PF00448 SRP54-type protein, GTPase domain M2909_08325 PF02881 SRP54-type protein, helical bundle domain M2909_08330 PF02655 ATP-grasp domain M2909_08330 PF18419 ATP-grasp-like domain M2909_08330 PF04262 Glutamate-cysteine ligase M2909_08335 PF05816 Toxic anion resistance protein (TelA) M2909_08345 PF00293 NUDIX domain M2909_08355 PF01048 Phosphorylase superfamily M2909_08360 PF00857 Isochorismatase family M2909_08365 PF01757 Acyltransferase family M2909_08370 PF00266 Aminotransferase class-V M2909_08385 PF01497 Periplasmic binding protein M2909_08385 PF12833 Helix-turn-helix domain M2909_08390 PF00664 ABC transporter transmembrane region M2909_08390 PF00005 ABC transporter M2909_08395 PF00664 ABC transporter transmembrane region M2909_08395 PF00005 ABC transporter M2909_08400 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M2909_08400 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M2909_08410 PF01323 DSBA-like thioredoxin domain M2909_08415 PF00005 ABC transporter M2909_08420 PF01458 Uncharacterized protein family (UPF0051) M2909_08425 PF00266 Aminotransferase class-V M2909_08430 PF01592 NifU-like N terminal domain M2909_08435 PF01458 Uncharacterized protein family (UPF0051) M2909_08440 PF00356 Bacterial regulatory proteins, lacI family M2909_08465 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family M2909_08470 PF01380 SIS domain M2909_08475 PF00294 pfkB family carbohydrate kinase M2909_08480 PF01081 KDPG and KHG aldolase M2909_08485 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M2909_08490 PF00528 Binding-protein-dependent transport system inner membrane component M2909_08495 PF00528 Binding-protein-dependent transport system inner membrane component M2909_08495 PF12911 N-terminal TM domain of oligopeptide transport permease C M2909_08500 PF00005 ABC transporter M2909_08505 PF00005 ABC transporter M2909_08505 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M2909_08510 PF00731 AIR carboxylase M2909_08520 PF02540 NAD synthase M2909_08525 PF00356 Bacterial regulatory proteins, lacI family M2909_08530 PF01547 Bacterial extracellular solute-binding protein M2909_08535 PF00528 Binding-protein-dependent transport system inner membrane component M2909_08540 PF00528 Binding-protein-dependent transport system inner membrane component M2909_08545 PF01116 Fructose-bisphosphate aldolase class-II M2909_08550 PF01979 Amidohydrolase family M2909_08560 PF00356 Bacterial regulatory proteins, lacI family M2909_08565 PF00365 Phosphofructokinase M2909_08570 PF00121 Triosephosphate isomerase M2909_08590 PF12848 ABC transporter M2909_08590 PF16326 ABC transporter C-terminal domain M2909_08590 PF00005 ABC transporter M2909_08600 PF01047 MarR family M2909_08600 PF00480 ROK family M2909_08610 PF02378 Phosphotransferase system, EIIC M2909_08620 PF02421 Ferrous iron transport protein B M2909_08620 PF07670 Nucleoside recognition M2909_08620 PF07664 Ferrous iron transport protein B C terminus M2909_08620 PF17910 FeoB cytosolic helical domain M2909_08630 PF12833 Helix-turn-helix domain M2909_08630 PF00072 Response regulator receiver domain M2909_08635 PF00672 HAMP domain M2909_08635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M2909_08635 PF06580 Histidine kinase M2909_08635 PF02743 Cache domain M2909_08640 PF00890 FAD binding domain M2909_08640 PF04205 FMN-binding domain M2909_08645 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M2909_08670 PF10417 C-terminal domain of 1-Cys peroxiredoxin M2909_08670 PF00578 AhpC/TSA family M2909_08675 PF00854 POT family M2909_08690 PF03358 NADPH-dependent FMN reductase M2909_08690 PF00890 FAD binding domain M2909_08690 PF04205 FMN-binding domain M2909_08715 PF00874 PRD domain M2909_08715 PF03123 CAT RNA binding domain M2909_08720 PF00367 phosphotransferase system, EIIB M2909_08720 PF02378 Phosphotransferase system, EIIC M2909_08720 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 M2909_08725 PF00232 Glycosyl hydrolase family 1 M2909_08750 PF00528 Binding-protein-dependent transport system inner membrane component M2909_08760 PF00528 Binding-protein-dependent transport system inner membrane component M2909_08765 PF00196 Bacterial regulatory proteins, luxR family M2909_08765 PF00072 Response regulator receiver domain M2909_08770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M2909_08770 PF06580 Histidine kinase M2909_08770 PF00672 HAMP domain M2909_08770 PF02743 Cache domain M2909_08800 PF00480 ROK family M2909_08810 PF07687 Peptidase dimerisation domain M2909_08810 PF01546 Peptidase family M20/M25/M40 M2909_08840 PF00756 Putative esterase M2909_08840 PF01476 LysM domain M2909_08845 PF00149 Calcineurin-like phosphoesterase M2909_08845 PF12320 Type 5 capsule protein repressor C-terminal domain M2909_08850 PF13476 AAA domain M2909_08860 PF01047 MarR family M2909_08865 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M2909_08875 PF03358 NADPH-dependent FMN reductase M2909_08885 PF00875 DNA photolyase M2909_08885 PF03441 FAD binding domain of DNA photolyase M2909_08900 PF01926 50S ribosome-binding GTPase M2909_08915 PF01926 50S ribosome-binding GTPase M2909_08920 PF01985 CRS1 / YhbY (CRM) domain M2909_08925 PF01467 Cytidylyltransferase-like M2909_08930 PF01966 HD domain M2909_08940 PF13649 Methyltransferase domain M2909_08950 PF00478 IMP dehydrogenase / GMP reductase domain M2909_08960 PF08543 Phosphomethylpyrimidine kinase M2909_08965 PF00155 Aminotransferase class I and II M2909_08965 PF00392 Bacterial regulatory proteins, gntR family M2909_08975 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III M2909_08975 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal M2909_08980 PF00550 Phosphopantetheine attachment site M2909_08985 PF03060 Nitronate monooxygenase M2909_08990 PF00698 Acyl transferase domain M2909_09000 PF02801 Beta-ketoacyl synthase, C-terminal domain M2909_09000 PF00109 Beta-ketoacyl synthase, N-terminal domain M2909_09005 PF00364 Biotin-requiring enzyme M2909_09010 PF07977 FabA-like domain M2909_09015 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M2909_09015 PF00289 Biotin carboxylase, N-terminal domain M2909_09015 PF02785 Biotin carboxylase C-terminal domain M2909_09020 PF01039 Carboxyl transferase domain M2909_09025 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit M2909_09030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M2909_09030 PF03466 LysR substrate binding domain M2909_09040 PF00676 Dehydrogenase E1 component M2909_09045 PF02780 Transketolase, C-terminal domain M2909_09045 PF02779 Transketolase, pyrimidine binding domain M2909_09050 PF02817 e3 binding domain M2909_09050 PF00364 Biotin-requiring enzyme M2909_09050 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M2909_09055 PF01515 Phosphate acetyl/butaryl transferase M2909_09060 PF00871 Acetokinase family M2909_09065 PF00005 ABC transporter M2909_09070 PF00528 Binding-protein-dependent transport system inner membrane component M2909_09075 PF06738 Putative threonine/serine exporter M2909_09095 PF01266 FAD dependent oxidoreductase M2909_09100 PF16916 Dimerisation domain of Zinc Transporter M2909_09100 PF01545 Cation efflux family M2909_09105 PF00120 Glutamine synthetase, catalytic domain M2909_09105 PF03951 Glutamine synthetase, beta-Grasp domain M2909_09110 PF00270 DEAD/DEAH box helicase M2909_09110 PF00271 Helicase conserved C-terminal domain M2909_09110 PF00570 HRDC domain M2909_09110 PF16124 RecQ zinc-binding M2909_09110 PF09382 RQC domain M2909_09120 PF00326 Prolyl oligopeptidase family M2909_09125 PF09383 NIL domain M2909_09125 PF00005 ABC transporter M2909_09130 PF00528 Binding-protein-dependent transport system inner membrane component M2909_09135 PF03180 NLPA lipoprotein M2909_09140 PF07687 Peptidase dimerisation domain M2909_09140 PF01546 Peptidase family M20/M25/M40 M2909_09150 PF00270 DEAD/DEAH box helicase M2909_09150 PF00271 Helicase conserved C-terminal domain M2909_09155 PF07694 5TMR of 5TMR-LYT M2909_09155 PF13492 GAF domain M2909_09155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M2909_09155 PF06580 Histidine kinase M2909_09160 PF04397 LytTr DNA-binding domain M2909_09160 PF00072 Response regulator receiver domain M2909_09165 PF02554 Carbon starvation protein CstA M2909_09175 PF01496 V-type ATPase 116kDa subunit family M2909_09180 PF00137 ATP synthase subunit C M2909_09190 PF01992 ATP synthase (C/AC39) subunit M2909_09195 PF01990 ATP synthase (F/14-kDa) subunit M2909_09200 PF16886 ATPsynthase alpha/beta subunit N-term extension M2909_09200 PF02874 ATP synthase alpha/beta family, beta-barrel domain M2909_09200 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M2909_09205 PF02874 ATP synthase alpha/beta family, beta-barrel domain M2909_09205 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M2909_09210 PF01813 ATP synthase subunit D M2909_09215 PF13520 Amino acid permease M2909_09220 PF01380 SIS domain M2909_09230 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase M2909_09235 PF00288 GHMP kinases N terminal domain M2909_09235 PF08544 GHMP kinases C terminal M2909_09235 PF10509 Galactokinase galactose-binding signature M2909_09240 PF16363 GDP-mannose 4,6 dehydratase M2909_09245 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain M2909_09245 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain M2909_09250 PF00356 Bacterial regulatory proteins, lacI family M2909_09255 PF00814 Glycoprotease family M2909_09265 PF00583 Acetyltransferase (GNAT) family M2909_09270 PF00814 Glycoprotease family M2909_09275 PF10385 RNA polymerase beta subunit external 1 domain M2909_09275 PF04560 RNA polymerase Rpb2, domain 7 M2909_09275 PF00562 RNA polymerase Rpb2, domain 6 M2909_09275 PF04565 RNA polymerase Rpb2, domain 3 M2909_09275 PF04561 RNA polymerase Rpb2, domain 2 M2909_09275 PF04563 RNA polymerase beta subunit M2909_09280 PF04997 RNA polymerase Rpb1, domain 1 M2909_09280 PF05000 RNA polymerase Rpb1, domain 4 M2909_09280 PF04983 RNA polymerase Rpb1, domain 3 M2909_09280 PF04998 RNA polymerase Rpb1, domain 5 M2909_09280 PF00623 RNA polymerase Rpb1, domain 2 M2909_09295 PF00300 Histidine phosphatase superfamily (branch 1) M2909_09300 PF00486 Transcriptional regulatory protein, C terminal M2909_09300 PF00072 Response regulator receiver domain M2909_09305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M2909_09310 PF00528 Binding-protein-dependent transport system inner membrane component M2909_09315 PF00005 ABC transporter M2909_09320 PF00497 Bacterial extracellular solute-binding proteins, family 3 M2909_09325 PF02618 YceG-like family M2909_09330 PF03449 Transcription elongation factor, N-terminal M2909_09330 PF01272 Transcription elongation factor, GreA/GreB, C-term M2909_09340 PF07730 Histidine kinase M2909_09340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M2909_09340 PF00672 HAMP domain M2909_09345 PF00196 Bacterial regulatory proteins, luxR family M2909_09345 PF00072 Response regulator receiver domain M2909_09350 PF02254 TrkA-N domain M2909_09350 PF02080 TrkA-C domain M2909_09360 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M2909_09360 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M2909_09370 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain M2909_09370 PF02777 Iron/manganese superoxide dismutases, C-terminal domain M2909_09375 PF01678 Diaminopimelate epimerase M2909_09380 PF00398 Ribosomal RNA adenine dimethylase M2909_09385 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M2909_09390 PF00005 ABC transporter M2909_09405 PF01712 Deoxynucleoside kinase M2909_09410 PF11975 Family 4 glycosyl hydrolase C-terminal domain M2909_09410 PF02056 Family 4 glycosyl hydrolase M2909_09420 PF14748 Pyrroline-5-carboxylate reductase dimerisation M2909_09420 PF03807 NADP oxidoreductase coenzyme F420-dependent M2909_09425 PF03706 Lysylphosphatidylglycerol synthase TM region M2909_09425 PF09924 Uncharacterised conserved protein (DUF2156) M2909_09435 PF00005 ABC transporter M2909_09440 PF00528 Binding-protein-dependent transport system inner membrane component M2909_09450 PF02705 K+ potassium transporter M2909_09455 PF00144 Beta-lactamase M2909_09460 PF07690 Major Facilitator Superfamily M2909_09465 PF07992 Pyridine nucleotide-disulphide oxidoreductase M2909_09475 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 M2909_09475 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) M2909_09480 PF07685 CobB/CobQ-like glutamine amidotransferase domain M2909_09485 PF08245 Mur ligase middle domain M2909_09485 PF08353 Domain of unknown function (DUF1727) M2909_09495 PF18708 MapZ extracellular C-terminal domain 2 M2909_09495 PF18041 MapZ extracellular domain 1 M2909_09500 PF02522 Aminoglycoside 3-N-acetyltransferase M2909_09505 PF01361 Tautomerase enzyme M2909_09510 PF03553 Na+/H+ antiporter family M2909_09515 PF00356 Bacterial regulatory proteins, lacI family M2909_09525 PF12344 Ultra-violet resistance protein B M2909_09525 PF17757 UvrB interaction domain M2909_09525 PF04851 Type III restriction enzyme, res subunit M2909_09525 PF02151 UvrB/uvrC motif M2909_09525 PF00271 Helicase conserved C-terminal domain M2909_09530 PF00005 ABC transporter M2909_09530 PF17755 UvrA DNA-binding domain M2909_09530 PF17760 UvrA interaction domain M2909_09535 PF01063 Amino-transferase class IV M2909_09540 PF03668 P-loop ATPase protein family M2909_09545 PF01933 Uncharacterised protein family UPF0052 M2909_09550 PF10298 WhiA N-terminal LAGLIDADG-like domain M2909_09550 PF14527 WhiA LAGLIDADG-like domain M2909_09550 PF02650 WhiA C-terminal HTH domain M2909_09555 PF00574 Clp protease M2909_09565 PF01245 Ribosomal protein L19 M2909_09570 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M2909_09575 PF02632 BioY family M2909_09580 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) M2909_09580 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 M2909_09585 PF00326 Prolyl oligopeptidase family M2909_09590 PF01883 Iron-sulfur cluster assembly protein M2909_09610 PF01470 Pyroglutamyl peptidase M2909_09620 PF12146 Serine aminopeptidase, S33 M2909_09625 PF01515 Phosphate acetyl/butaryl transferase M2909_09630 PF00871 Acetokinase family M2909_09635 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M2909_09635 PF07992 Pyridine nucleotide-disulphide oxidoreductase M2909_09640 PF00676 Dehydrogenase E1 component M2909_09645 PF02779 Transketolase, pyrimidine binding domain M2909_09645 PF02780 Transketolase, C-terminal domain M2909_09650 PF02817 e3 binding domain M2909_09650 PF00364 Biotin-requiring enzyme M2909_09650 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M2909_09660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M2909_09660 PF03466 LysR substrate binding domain M2909_09665 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit M2909_09670 PF02378 Phosphotransferase system, EIIC M2909_09670 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit M2909_09675 PF00232 Glycosyl hydrolase family 1 M2909_09685 PF00455 DeoR C terminal sensor domain M2909_09685 PF08220 DeoR-like helix-turn-helix domain M2909_09690 PF02502 Ribose/Galactose Isomerase M2909_09695 PF02502 Ribose/Galactose Isomerase M2909_09700 PF01791 DeoC/LacD family aldolase M2909_09705 PF00294 pfkB family carbohydrate kinase M2909_09715 PF13091 PLD-like domain M2909_09720 PF01228 Glycine radical M2909_09720 PF02901 Pyruvate formate lyase-like M2909_09725 PF04055 Radical SAM superfamily M2909_09730 PF01368 DHH family M2909_09730 PF02833 DHHA2 domain M2909_09735 PF00849 RNA pseudouridylate synthase M2909_09735 PF01479 S4 domain M2909_09750 PF13307 Helicase C-terminal domain M2909_09750 PF04851 Type III restriction enzyme, res subunit M2909_09750 PF00929 Exonuclease M2909_09760 PF00155 Aminotransferase class I and II M2909_09765 PF01336 OB-fold nucleic acid binding domain M2909_09765 PF00152 tRNA synthetases class II (D, K and N) M2909_09770 PF03965 Penicillinase repressor M2909_09775 PF00403 Heavy-metal-associated domain M2909_09780 PF00403 Heavy-metal-associated domain M2909_09790 PF00860 Permease family M2909_09795 PF03591 AzlC protein M2909_09805 PF17783 CvfB-like winged helix domain M2909_09805 PF13509 S1 domain M2909_09815 PF01475 Ferric uptake regulator family M2909_09820 PF02899 Phage integrase, N-terminal SAM-like domain M2909_09820 PF00589 Phage integrase family M2909_09825 PF02616 Segregation and condensation protein ScpA M2909_09830 PF04079 Segregation and condensation complex subunit ScpB M2909_09835 PF01479 S4 domain M2909_09835 PF00849 RNA pseudouridylate synthase M2909_09840 PF00486 Transcriptional regulatory protein, C terminal M2909_09840 PF00072 Response regulator receiver domain M2909_09845 PF12822 ECF transporter, substrate-specific component M2909_09860 PF00271 Helicase conserved C-terminal domain M2909_09860 PF00270 DEAD/DEAH box helicase M2909_09870 PF02224 Cytidylate kinase M2909_09875 PF00575 S1 RNA binding domain M2909_09880 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal M2909_09880 PF01926 50S ribosome-binding GTPase M2909_09885 PF00216 Bacterial DNA-binding protein M2909_09895 PF08858 IDEAL domain M2909_09895 PF08864 UPF0302 domain M2909_09900 PF04198 Putative sugar-binding domain M2909_09905 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain M2909_09905 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain M2909_09910 PF00162 Phosphoglycerate kinase M2909_09915 PF00121 Triosephosphate isomerase M2909_09920 PF01676 Metalloenzyme superfamily M2909_09920 PF06415 BPG-independent PGAM N-terminus (iPGM_N) M2909_09925 PF00113 Enolase, C-terminal TIM barrel domain M2909_09925 PF03952 Enolase, N-terminal domain M2909_09945 PF08708 Primase C terminal 1 (PriCT-1) M2909_09955 PF02796 Helix-turn-helix domain of resolvase M2909_09955 PF00239 Resolvase, N terminal domain M2909_09965 PF00302 Chloramphenicol acetyltransferase M2909_09970 PF02486 Replication initiation factor M2909_09985 PF06308 23S rRNA methylastransferase leader peptide (ErmCL) M2909_09990 PF00398 Ribosomal RNA adenine dimethylase M2909_10005 PF00583 Acetyltransferase (GNAT) family M2909_10010 PF01636 Phosphotransferase enzyme family M2909_10020 PF00583 Acetyltransferase (GNAT) family M2909_10025 PF01636 Phosphotransferase enzyme family M2909_10040 PF00156 Phosphoribosyl transferase domain M2909_10050 PF01131 DNA topoisomerase M2909_10050 PF01751 Toprim domain M2909_10060 PF06308 23S rRNA methylastransferase leader peptide (ErmCL) M2909_10065 PF00398 Ribosomal RNA adenine dimethylase M2909_10075 PF13614 AAA domain M2909_10085 PF08998 Bacterial epsilon antitoxin