BHY08_00005	SM00382	ATPases associated with a variety of cellular activities
BHY08_00005	SM00760	Bacterial dnaA protein helix-turn-helix domain
BHY08_00010	SM00480	DNA polymerase III beta subunit
BHY08_00030	SM00387	Histidine kinase-like ATPases
BHY08_00030	SM00433	TopoisomeraseII
BHY08_00035	SM00434	DNA Topoisomerase IV
BHY08_00070	SM00788	Adenylosuccinate synthetase
BHY08_00090	SM00382	ATPases associated with a variety of cellular activities
BHY08_00110	SM00900	BHY08_00110
BHY08_00130	SM00354	helix_turn _helix lactose operon repressor
BHY08_00135	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
BHY08_00150	SM00382	ATPases associated with a variety of cellular activities
BHY08_00210	SM00448	cheY-homologous receiver domain
BHY08_00215	SM00387	Histidine kinase-like ATPases
BHY08_00230	SM00014	Acid phosphatase homologues
BHY08_00250	SM00047	Lysozyme subfamily 2
BHY08_00250	SM00257	Lysin motif
BHY08_00265	SM00363	S4 RNA-binding domain
BHY08_00280	SM00382	ATPases associated with a variety of cellular activities
BHY08_00325	SM00382	ATPases associated with a variety of cellular activities
BHY08_00330	SM00062	Bacterial periplasmic substrate-binding proteins
BHY08_00345	SM00830	Chorismate mutase type II
BHY08_00360	SM00530	Helix-turn-helix XRE-family like proteins 
BHY08_00370	SM00855	Phosphoglycerate mutase family
BHY08_00395	SM00487	DEAD-like helicases superfamily
BHY08_00395	SM00490	helicase superfamily c-terminal domain
BHY08_00395	SM00982	BHY08_00395
BHY08_00395	SM01058	CarD-like/TRCF domain
BHY08_00405	SM00363	S4 RNA-binding domain
BHY08_00415	SM00316	Ribosomal protein S1-like RNA-binding domain
BHY08_00420	SM00977	TilS substrate C-terminal domain
BHY08_00430	SM00382	ATPases associated with a variety of cellular activities
BHY08_00580	SM00382	ATPases associated with a variety of cellular activities
BHY08_00580	SM01086	C-terminal, D2-small domain, of ClpB protein
BHY08_00610	SM00382	ATPases associated with a variety of cellular activities
BHY08_00615	SM00382	ATPases associated with a variety of cellular activities
BHY08_00645	SM00855	Phosphoglycerate mutase family
BHY08_00700	SM00487	DEAD-like helicases superfamily
BHY08_00700	SM00490	helicase superfamily c-terminal domain
BHY08_00730	SM00072	Guanylate kinase homologues.
BHY08_00735	SM01409	BHY08_00735
BHY08_00740	SM00487	DEAD-like helicases superfamily
BHY08_00740	SM00490	helicase superfamily c-terminal domain
BHY08_00760	SM00331	Sigma factor PP2C-like phosphatases
BHY08_00760	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
BHY08_00765	SM00220	Serine/Threonine protein kinases, catalytic domain
BHY08_00765	SM00740	BHY08_00765
BHY08_00780	SM00983	Thiamin pyrophosphokinase, vitamin B1 binding domain
BHY08_00795	SM01120	BHY08_00795
BHY08_00795	SM01121	BHY08_00795
BHY08_00850	SM00382	ATPases associated with a variety of cellular activities
BHY08_00935	SM00382	ATPases associated with a variety of cellular activities
BHY08_00965	SM01323	BHY08_00965
BHY08_00980	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BHY08_00980	SM00866	BHY08_00980
BHY08_00990	SM01133	BHY08_00990
BHY08_01015	SM00836	DALR anticodon binding domain
BHY08_01015	SM01016	Arginyl tRNA synthetase N terminal dom
BHY08_01020	SM00420	helix_turn_helix, Deoxyribose operon repressor
BHY08_01020	SM01134	BHY08_01020
BHY08_01040	SM01061	CAT RNA binding domain
BHY08_01080	SM00382	ATPases associated with a variety of cellular activities
BHY08_01150	SM00382	ATPases associated with a variety of cellular activities
BHY08_01185	SM00493	BHY08_01185
BHY08_01190	SM00650	Ribosomal RNA adenine dimethylases
BHY08_01200	SM00382	ATPases associated with a variety of cellular activities
BHY08_01205	SM00851	MGS-like domain
BHY08_01225	SM00382	ATPases associated with a variety of cellular activities
BHY08_01230	SM00382	ATPases associated with a variety of cellular activities
BHY08_01245	SM00287	Bacterial SH3 domain homologues
BHY08_01245	SM00646	BHY08_01245
BHY08_01260	SM00382	ATPases associated with a variety of cellular activities
BHY08_01265	SM00382	ATPases associated with a variety of cellular activities
BHY08_01285	SM00358	Double-stranded RNA binding motif
BHY08_01285	SM00535	Ribonuclease III family
BHY08_01290	SM00968	SMC proteins Flexible Hinge Domain
BHY08_01300	SM00382	ATPases associated with a variety of cellular activities
BHY08_01300	SM00962	SRP54-type protein, GTPase domain
BHY08_01300	SM00963	SRP54-type protein, helical bundle domain
BHY08_01305	SM00420	helix_turn_helix, Deoxyribose operon repressor
BHY08_01305	SM01134	BHY08_01305
BHY08_01425	SM00091	PAS domain
BHY08_01425	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BHY08_01425	SM00387	Histidine kinase-like ATPases
BHY08_01425	SM00388	His Kinase A (phosphoacceptor) domain
BHY08_01440	SM00849	Metallo-beta-lactamase superfamily
BHY08_01445	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BHY08_01515	SM00857	Resolvase, N terminal domain
BHY08_01520	SM00857	Resolvase, N terminal domain
BHY08_01530	SM00487	DEAD-like helicases superfamily
BHY08_01530	SM00490	helicase superfamily c-terminal domain
BHY08_01575	SM00861	Transketolase, pyrimidine binding domain
BHY08_01640	SM00382	ATPases associated with a variety of cellular activities
BHY08_01650	SM00448	cheY-homologous receiver domain
BHY08_01650	SM00862	Transcriptional regulatory protein, C terminal
BHY08_01655	SM00387	Histidine kinase-like ATPases
BHY08_01655	SM00388	His Kinase A (phosphoacceptor) domain
BHY08_01725	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BHY08_01725	SM00866	BHY08_01725
BHY08_01780	SM00382	ATPases associated with a variety of cellular activities
BHY08_01785	SM00420	helix_turn_helix, Deoxyribose operon repressor
BHY08_01785	SM01134	BHY08_01785
BHY08_01820	SM00487	DEAD-like helicases superfamily
BHY08_01820	SM00490	helicase superfamily c-terminal domain
BHY08_01890	SM00382	ATPases associated with a variety of cellular activities
BHY08_01930	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
BHY08_01985	SM00833	Cobalamin synthesis protein cobW C-terminal domain
BHY08_02015	SM00448	cheY-homologous receiver domain
BHY08_02015	SM00850	LytTr DNA-binding domain
BHY08_02020	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BHY08_02020	SM00387	Histidine kinase-like ATPases
BHY08_02030	SM00422	helix_turn_helix, mercury resistance
BHY08_02075	SM01400	BHY08_02075
BHY08_02095	SM00382	ATPases associated with a variety of cellular activities
BHY08_02120	SM00382	ATPases associated with a variety of cellular activities
BHY08_02125	SM00530	Helix-turn-helix XRE-family like proteins 
BHY08_02130	SM00829	Enoylreductase
BHY08_02180	SM00986	Uracil DNA glycosylase superfamily
BHY08_02180	SM00987	UreE urease accessory protein, C-terminal domain 
BHY08_02200	SM00354	helix_turn _helix lactose operon repressor
BHY08_02235	SM00640	Glycosyl hydrolases family 32
BHY08_02245	SM00354	helix_turn _helix lactose operon repressor
BHY08_02275	SM00382	ATPases associated with a variety of cellular activities
BHY08_02275	SM00930	BHY08_02275
BHY08_02300	SM00382	ATPases associated with a variety of cellular activities
BHY08_02320	SM00849	Metallo-beta-lactamase superfamily
BHY08_02370	SM00732	Likely ribonuclease with RNase H fold.
BHY08_02405	SM00463	Small MutS-related domain
BHY08_02405	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
BHY08_02405	SM00534	ATPase domain of DNA mismatch repair MUTS family
BHY08_02415	SM00465	GIY-YIG type nucleases (URI domain)
BHY08_02440	SM00852	Probable molybdopterin binding domain
BHY08_02445	SM00382	ATPases associated with a variety of cellular activities
BHY08_02450	SM00322	K homology RNA-binding domain
BHY08_02450	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BHY08_02480	SM00849	Metallo-beta-lactamase superfamily
BHY08_02505	SM00382	ATPases associated with a variety of cellular activities
BHY08_02535	SM01120	BHY08_02535
BHY08_02555	SM00357	Cold shock protein domain
BHY08_02620	SM00841	Elongation factor P, C-terminal
BHY08_02620	SM01185	BHY08_02620
BHY08_02660	SM00363	S4 RNA-binding domain
BHY08_02725	SM00842	Cell division protein FtsA
BHY08_02730	SM00864	Tubulin/FtsZ family, GTPase domain
BHY08_02730	SM00865	Tubulin/FtsZ family, C-terminal domain
BHY08_02750	SM00363	S4 RNA-binding domain
BHY08_02775	SM00354	helix_turn _helix lactose operon repressor
BHY08_02790	SM01061	CAT RNA binding domain
BHY08_02825	SM00382	ATPases associated with a variety of cellular activities
BHY08_02830	SM00062	Bacterial periplasmic substrate-binding proteins
BHY08_02855	SM00530	Helix-turn-helix XRE-family like proteins 
BHY08_02915	SM00116	Domain in cystathionine beta-synthase and other proteins.
BHY08_02915	SM00382	ATPases associated with a variety of cellular activities
BHY08_02985	SM00382	ATPases associated with a variety of cellular activities
BHY08_03000	SM00244	prohibitin homologues
BHY08_03055	SM00382	ATPases associated with a variety of cellular activities
BHY08_03055	SM01086	C-terminal, D2-small domain, of ClpB protein
BHY08_03105	SM00382	ATPases associated with a variety of cellular activities
BHY08_03105	SM00994	ClpX C4-type zinc finger
BHY08_03105	SM01086	C-terminal, D2-small domain, of ClpB protein
BHY08_03115	SM00448	cheY-homologous receiver domain
BHY08_03115	SM00862	Transcriptional regulatory protein, C terminal
BHY08_03120	SM00387	Histidine kinase-like ATPases
BHY08_03120	SM00388	His Kinase A (phosphoacceptor) domain
BHY08_03135	SM00257	Lysin motif
BHY08_03190	SM00382	ATPases associated with a variety of cellular activities
BHY08_03195	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BHY08_03255	SM00861	Transketolase, pyrimidine binding domain
BHY08_03370	SM00387	Histidine kinase-like ATPases
BHY08_03375	SM00421	helix_turn_helix, Lux Regulon
BHY08_03375	SM00448	cheY-homologous receiver domain
BHY08_03410	SM00878	Biotin carboxylase C-terminal domain
BHY08_03445	SM00278	Helix-hairpin-helix DNA-binding motif class 1
BHY08_03465	SM00849	Metallo-beta-lactamase superfamily
BHY08_03500	SM00849	Metallo-beta-lactamase superfamily
BHY08_03515	SM00855	Phosphoglycerate mutase family
BHY08_03550	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BHY08_03560	SM00479	BHY08_03560
BHY08_03560	SM00481	DNA polymerase alpha chain like domain
BHY08_03600	SM00316	Ribosomal protein S1-like RNA-binding domain
BHY08_03600	SM00322	K homology RNA-binding domain
BHY08_03635	SM00904	Riboflavin kinase
BHY08_03640	SM00729	Elongator protein 3, MiaB family, Radical SAM
BHY08_03660	SM00271	DnaJ molecular chaperone homology domain
BHY08_03675	SM01350	BHY08_03675
BHY08_03685	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BHY08_03725	SM00357	Cold shock protein domain
BHY08_03725	SM00382	ATPases associated with a variety of cellular activities
BHY08_03725	SM00959	Rho termination factor, N-terminal domain
BHY08_03750	SM00831	Cation transporter/ATPase, N-terminus
BHY08_03790	SM00316	Ribosomal protein S1-like RNA-binding domain
BHY08_03845	SM00479	BHY08_03845
BHY08_03845	SM00487	DEAD-like helicases superfamily
BHY08_03845	SM00491	BHY08_03845
BHY08_03875	SM00899	BHY08_03875
BHY08_03895	SM00487	DEAD-like helicases superfamily
BHY08_03895	SM00490	helicase superfamily c-terminal domain
BHY08_03900	SM00382	ATPases associated with a variety of cellular activities
BHY08_03920	SM00382	ATPases associated with a variety of cellular activities
BHY08_03925	SM00382	ATPases associated with a variety of cellular activities
BHY08_03995	SM00382	ATPases associated with a variety of cellular activities
BHY08_04020	SM00116	Domain in cystathionine beta-synthase and other proteins.
BHY08_04040	SM00450	Rhodanese Homology Domain
BHY08_04045	SM00450	Rhodanese Homology Domain
BHY08_04060	SM00905	Dihydroneopterin aldolase
BHY08_04110	SM00342	helix_turn_helix, arabinose operon control protein
BHY08_04125	SM00354	helix_turn _helix lactose operon repressor
BHY08_04150	SM00850	LytTr DNA-binding domain
BHY08_04195	SM00354	helix_turn _helix lactose operon repressor
BHY08_04200	SM00640	Glycosyl hydrolases family 32
BHY08_04215	SM00062	Bacterial periplasmic substrate-binding proteins
BHY08_04235	SM00316	Ribosomal protein S1-like RNA-binding domain
BHY08_04235	SM00955	BHY08_04235
BHY08_04275	SM00382	ATPases associated with a variety of cellular activities
BHY08_04325	SM00382	ATPases associated with a variety of cellular activities
BHY08_04350	SM00967	RNA 2'-O ribose methyltransferase substrate binding
BHY08_04355	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BHY08_04370	SM00873	B3/4 domain
BHY08_04370	SM00874	tRNA synthetase B5 domain
BHY08_04370	SM00896	Ferredoxin-fold anticodon binding domain
BHY08_04385	SM00155	Phospholipase D. Active site motifs.
BHY08_04405	SM00831	Cation transporter/ATPase, N-terminus
BHY08_04415	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
BHY08_04415	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
BHY08_04415	SM00493	BHY08_04415
BHY08_04420	SM00382	ATPases associated with a variety of cellular activities
BHY08_04425	SM00062	Bacterial periplasmic substrate-binding proteins
BHY08_04425	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
BHY08_04450	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BHY08_04450	SM00866	BHY08_04450
BHY08_04475	SM00382	ATPases associated with a variety of cellular activities
BHY08_04500	SM00861	Transketolase, pyrimidine binding domain
BHY08_04555	SM00354	helix_turn _helix lactose operon repressor
BHY08_04585	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BHY08_04585	SM00245	tail specific protease
BHY08_04610	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
BHY08_04610	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
BHY08_04610	SM00493	BHY08_04610
BHY08_04630	SM00382	ATPases associated with a variety of cellular activities
BHY08_04630	SM01086	C-terminal, D2-small domain, of ClpB protein
BHY08_04670	SM00382	ATPases associated with a variety of cellular activities
BHY08_04670	SM00843	BHY08_04670
BHY08_04695	SM00278	Helix-hairpin-helix DNA-binding motif class 1
BHY08_04695	SM00292	breast cancer carboxy-terminal domain
BHY08_04695	SM00532	Ligase N family
BHY08_04715	SM00046	Diacylglycerol kinase catalytic domain (presumed)
BHY08_04725	SM00382	ATPases associated with a variety of cellular activities
BHY08_04740	SM00448	cheY-homologous receiver domain
BHY08_04740	SM00862	Transcriptional regulatory protein, C terminal
BHY08_04770	SM00382	ATPases associated with a variety of cellular activities
BHY08_04805	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
BHY08_04830	SM00387	Histidine kinase-like ATPases
BHY08_04830	SM00433	TopoisomeraseII
BHY08_04835	SM00434	DNA Topoisomerase IV
BHY08_04855	SM01131	BHY08_04855
BHY08_04895	SM00448	cheY-homologous receiver domain
BHY08_04895	SM00862	Transcriptional regulatory protein, C terminal
BHY08_04900	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BHY08_04900	SM00387	Histidine kinase-like ATPases
BHY08_04900	SM00388	His Kinase A (phosphoacceptor) domain
BHY08_04935	SM00382	ATPases associated with a variety of cellular activities
BHY08_04935	SM01086	C-terminal, D2-small domain, of ClpB protein
BHY08_04975	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BHY08_04985	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
BHY08_04985	SM00474	3'-5' exonuclease
BHY08_04985	SM00475	5'-3' exonuclease
BHY08_04985	SM00482	DNA polymerase A domain
BHY08_04990	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
BHY08_04990	SM01232	BHY08_04990
BHY08_05030	SM01207	BHY08_05030
BHY08_05035	SM00881	CoA binding domain
BHY08_05045	SM00382	ATPases associated with a variety of cellular activities
BHY08_05095	SM00838	Elongation factor G C-terminus
BHY08_05110	SM00530	Helix-turn-helix XRE-family like proteins 
BHY08_05255	SM00479	BHY08_05255
BHY08_05260	SM00382	ATPases associated with a variety of cellular activities
BHY08_05320	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
BHY08_05335	SM00851	MGS-like domain
BHY08_05335	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
BHY08_05340	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
BHY08_05365	SM00363	S4 RNA-binding domain
BHY08_05385	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
BHY08_05410	SM00382	ATPases associated with a variety of cellular activities
BHY08_05450	SM00382	ATPases associated with a variety of cellular activities
BHY08_05470	SM00400	zinc finger
BHY08_05470	SM00493	BHY08_05470
BHY08_05485	SM00740	BHY08_05485
BHY08_05500	SM00382	ATPases associated with a variety of cellular activities
BHY08_05505	SM00382	ATPases associated with a variety of cellular activities
BHY08_05515	SM00518	AP endonuclease family 2
BHY08_05530	SM00062	Bacterial periplasmic substrate-binding proteins
BHY08_05530	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
BHY08_05535	SM00382	ATPases associated with a variety of cellular activities
BHY08_05540	SM00363	S4 RNA-binding domain
BHY08_05580	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BHY08_05600	SM00986	Uracil DNA glycosylase superfamily
BHY08_05600	SM00987	UreE urease accessory protein, C-terminal domain 
BHY08_05630	SM00382	ATPases associated with a variety of cellular activities
BHY08_05650	SM00382	ATPases associated with a variety of cellular activities
BHY08_05650	SM00930	BHY08_05650
BHY08_05655	SM01133	BHY08_05655
BHY08_05690	SM00382	ATPases associated with a variety of cellular activities
BHY08_05695	SM00487	DEAD-like helicases superfamily
BHY08_05695	SM00490	helicase superfamily c-terminal domain
BHY08_05705	SM01005	Alanine racemase, C-terminal domain
BHY08_05725	SM00841	Elongation factor P, C-terminal
BHY08_05725	SM01185	BHY08_05725
BHY08_05745	SM00422	helix_turn_helix, mercury resistance
BHY08_05775	SM00986	Uracil DNA glycosylase superfamily
BHY08_05775	SM00987	UreE urease accessory protein, C-terminal domain 
BHY08_05785	SM00450	Rhodanese Homology Domain
BHY08_05810	SM00347	helix_turn_helix multiple antibiotic resistance protein
BHY08_05875	SM00859	Semialdehyde dehydrogenase, NAD binding domain
BHY08_05905	SM00347	helix_turn_helix multiple antibiotic resistance protein
BHY08_05935	SM00878	Biotin carboxylase C-terminal domain
BHY08_05950	SM00825	Beta-ketoacyl synthase
BHY08_05955	SM00822	BHY08_05955
BHY08_05960	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
BHY08_05980	SM00347	helix_turn_helix multiple antibiotic resistance protein
BHY08_05995	SM00226	Low molecular weight phosphatase family
BHY08_06015	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BHY08_06030	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
BHY08_06065	SM00116	Domain in cystathionine beta-synthase and other proteins.
BHY08_06125	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BHY08_06165	SM00028	Tetratricopeptide repeats
BHY08_06175	SM00411	bacterial (prokaryotic) histone like domain
BHY08_06185	SM00316	Ribosomal protein S1-like RNA-binding domain
BHY08_06195	SM00257	Lysin motif
BHY08_06200	SM00487	DEAD-like helicases superfamily
BHY08_06200	SM00490	helicase superfamily c-terminal domain
BHY08_06225	SM00363	S4 RNA-binding domain
BHY08_06275	SM00481	DNA polymerase alpha chain like domain
BHY08_06340	SM00490	helicase superfamily c-terminal domain
BHY08_06365	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BHY08_06365	SM00866	BHY08_06365
BHY08_06390	SM00116	Domain in cystathionine beta-synthase and other proteins.
BHY08_06395	SM00382	ATPases associated with a variety of cellular activities
BHY08_06400	SM00382	ATPases associated with a variety of cellular activities
BHY08_06420	SM01234	BHY08_06420
BHY08_06490	SM00870	BHY08_06490
BHY08_06510	SM00382	ATPases associated with a variety of cellular activities
BHY08_06510	SM00962	SRP54-type protein, GTPase domain
BHY08_06510	SM00963	SRP54-type protein, helical bundle domain
BHY08_06540	SM00382	ATPases associated with a variety of cellular activities
BHY08_06545	SM00937	BHY08_06545
BHY08_06550	SM00957	SecA DEAD-like domain
BHY08_06550	SM00958	SecA preprotein cross-linking domain
BHY08_06575	SM01192	BHY08_06575
BHY08_06575	SM01193	BHY08_06575
BHY08_06595	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
BHY08_06625	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BHY08_06625	SM00387	Histidine kinase-like ATPases
BHY08_06625	SM00388	His Kinase A (phosphoacceptor) domain
BHY08_06630	SM00448	cheY-homologous receiver domain
BHY08_06630	SM00862	Transcriptional regulatory protein, C terminal
BHY08_06635	SM00382	ATPases associated with a variety of cellular activities
BHY08_06640	SM00382	ATPases associated with a variety of cellular activities
BHY08_06645	SM01240	BHY08_06645
BHY08_06655	SM00382	ATPases associated with a variety of cellular activities
BHY08_06665	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BHY08_06720	SM00493	BHY08_06720
BHY08_06730	SM00382	ATPases associated with a variety of cellular activities
BHY08_06805	SM00382	ATPases associated with a variety of cellular activities
BHY08_06815	SM00857	Resolvase, N terminal domain
BHY08_06820	SM00382	ATPases associated with a variety of cellular activities
BHY08_06825	SM00382	ATPases associated with a variety of cellular activities
BHY08_06875	SM00382	ATPases associated with a variety of cellular activities
BHY08_06970	SM00357	Cold shock protein domain
BHY08_06985	SM00155	Phospholipase D. Active site motifs.
BHY08_07010	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
BHY08_07010	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
BHY08_07030	SM00382	ATPases associated with a variety of cellular activities
BHY08_07035	SM00382	ATPases associated with a variety of cellular activities
BHY08_07110	SM00981	BHY08_07110
BHY08_07135	SM00478	endonuclease III
BHY08_07135	SM00525	BHY08_07135
BHY08_07180	SM00937	BHY08_07180
BHY08_07220	SM00382	ATPases associated with a variety of cellular activities
BHY08_07265	SM00530	Helix-turn-helix XRE-family like proteins 
BHY08_07290	SM00062	Bacterial periplasmic substrate-binding proteins
BHY08_07295	SM00382	ATPases associated with a variety of cellular activities
BHY08_07330	SM00529	Helix-turn-helix diphteria tox regulatory element
BHY08_07410	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BHY08_07420	SM01103	BHY08_07420
BHY08_07460	SM01209	BHY08_07460
BHY08_07460	SM01210	BHY08_07460
BHY08_07465	SM00798	AICARFT/IMPCHase bienzyme
BHY08_07465	SM00851	MGS-like domain
BHY08_07490	SM01211	BHY08_07490
BHY08_07505	SM00998	Adenylosuccinate lyase C-terminus
BHY08_07515	SM01001	AIR carboxylase
BHY08_07525	SM00028	Tetratricopeptide repeats
BHY08_07525	SM01043	Bacterial transcriptional activator domain
BHY08_07575	SM01221	BHY08_07575
BHY08_07575	SM01222	BHY08_07575
BHY08_07585	SM00047	Lysozyme subfamily 2
BHY08_07680	SM00641	Glycosyl hydrolases family 25
BHY08_07680	SM00728	Clostridial hydrophobic, with a conserved W residue, domain.
BHY08_07685	SM00728	Clostridial hydrophobic, with a conserved W residue, domain.
BHY08_07710	SM00116	Domain in cystathionine beta-synthase and other proteins.
BHY08_07710	SM01091	Transporter associated domain
BHY08_07735	SM00478	endonuclease III
BHY08_07735	SM00525	BHY08_07735
BHY08_07765	SM00641	Glycosyl hydrolases family 25
BHY08_07780	SM00984	UDP binding domain
BHY08_07890	SM00382	ATPases associated with a variety of cellular activities
BHY08_07930	SM00981	BHY08_07930
BHY08_07950	SM00382	ATPases associated with a variety of cellular activities
BHY08_07955	SM00382	ATPases associated with a variety of cellular activities
BHY08_07985	SM00382	ATPases associated with a variety of cellular activities
BHY08_08000	SM00731	SprT homologues.
BHY08_08005	SM00316	Ribosomal protein S1-like RNA-binding domain
BHY08_08005	SM00732	Likely ribonuclease with RNase H fold.
BHY08_08025	SM00047	Lysozyme subfamily 2
BHY08_08060	SM00382	ATPases associated with a variety of cellular activities
BHY08_08065	SM00387	Histidine kinase-like ATPases
BHY08_08070	SM00448	cheY-homologous receiver domain
BHY08_08070	SM00862	Transcriptional regulatory protein, C terminal
BHY08_08075	SM00890	Domain of unknown function
BHY08_08100	SM01057	Eukaryotic-type carbonic anhydrase
BHY08_08195	SM00382	ATPases associated with a variety of cellular activities
BHY08_08230	SM00861	Transketolase, pyrimidine binding domain
BHY08_08240	SM00831	Cation transporter/ATPase, N-terminus
BHY08_08250	SM00849	Metallo-beta-lactamase superfamily
BHY08_08320	SM00267	diguanylate cyclase
BHY08_08335	SM00642	Alpha-amylase domain
BHY08_08345	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BHY08_08345	SM00866	BHY08_08345
BHY08_08350	SM00316	Ribosomal protein S1-like RNA-binding domain
BHY08_08350	SM00322	K homology RNA-binding domain
BHY08_08355	SM01387	BHY08_08355
BHY08_08360	SM01350	BHY08_08360
BHY08_08375	SM00363	S4 RNA-binding domain
BHY08_08375	SM01390	BHY08_08375
BHY08_08385	SM00116	Domain in cystathionine beta-synthase and other proteins.
BHY08_08385	SM00924	MgtE intracellular N domain
BHY08_08400	SM00954	Region found in RelA / SpoT proteins
BHY08_08405	SM01118	BHY08_08405
BHY08_08440	SM00382	ATPases associated with a variety of cellular activities
BHY08_08445	SM00881	CoA binding domain
BHY08_08455	SM00883	Chaperonin 10 Kd subunit
BHY08_08470	SM00422	helix_turn_helix, mercury resistance
BHY08_08550	SM00116	Domain in cystathionine beta-synthase and other proteins.
BHY08_08560	SM00382	ATPases associated with a variety of cellular activities
BHY08_08565	SM00382	ATPases associated with a variety of cellular activities
BHY08_08605	SM00988	UreE urease accessory protein, N-terminal domain
BHY08_08635	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BHY08_08660	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
BHY08_08660	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
BHY08_08695	SM00046	Diacylglycerol kinase catalytic domain (presumed)
BHY08_08700	SM00382	ATPases associated with a variety of cellular activities
BHY08_08705	SM00855	Phosphoglycerate mutase family
BHY08_08740	SM00382	ATPases associated with a variety of cellular activities
BHY08_08790	SM00642	Alpha-amylase domain
BHY08_08820	SM00342	helix_turn_helix, arabinose operon control protein
BHY08_08825	SM00354	helix_turn _helix lactose operon repressor
BHY08_08855	SM01022	BHY08_08855
BHY08_08895	SM00062	Bacterial periplasmic substrate-binding proteins
BHY08_08915	SM01323	BHY08_08915
BHY08_08930	SM00382	ATPases associated with a variety of cellular activities
BHY08_08935	SM00278	Helix-hairpin-helix DNA-binding motif class 1
BHY08_08950	SM00853	MutL C terminal dimerisation domain
BHY08_08950	SM01340	BHY08_08950
BHY08_08955	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
BHY08_08955	SM00534	ATPase domain of DNA mismatch repair MUTS family
BHY08_09000	SM00450	Rhodanese Homology Domain
BHY08_09015	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BHY08_09015	SM00954	Region found in RelA / SpoT proteins
BHY08_09035	SM00382	ATPases associated with a variety of cellular activities
BHY08_09130	SM00663	RNA polymerase I subunit A N-terminus
BHY08_09200	SM00899	BHY08_09200
BHY08_09215	SM01061	CAT RNA binding domain
BHY08_09230	SM00487	DEAD-like helicases superfamily
BHY08_09230	SM00490	helicase superfamily c-terminal domain
BHY08_09240	SM00382	ATPases associated with a variety of cellular activities
BHY08_09245	SM00382	ATPases associated with a variety of cellular activities
BHY08_09255	SM00849	Metallo-beta-lactamase superfamily
BHY08_09270	SM00357	Cold shock protein domain
BHY08_09300	SM00881	CoA binding domain
BHY08_09360	SM00226	Low molecular weight phosphatase family
BHY08_09375	SM00422	helix_turn_helix, mercury resistance
BHY08_09400	SM00967	RNA 2'-O ribose methyltransferase substrate binding
BHY08_09405	SM00535	Ribonuclease III family
BHY08_09410	SM00840	BHY08_09410
BHY08_09420	SM00670	Large family of predicted nucleotide-binding domains
BHY08_09425	SM00382	ATPases associated with a variety of cellular activities
BHY08_09470	SM00382	ATPases associated with a variety of cellular activities
BHY08_09480	SM01266	BHY08_09480
BHY08_09495	SM01005	Alanine racemase, C-terminal domain
BHY08_09515	SM01130	BHY08_09515
BHY08_09565	SM00382	ATPases associated with a variety of cellular activities
BHY08_09690	SM00530	Helix-turn-helix XRE-family like proteins 
BHY08_09725	SM01329	BHY08_09725
BHY08_09730	SM00917	LeuA allosteric (dimerisation) domain
BHY08_09780	SM00347	helix_turn_helix multiple antibiotic resistance protein
BHY08_09805	SM00382	ATPases associated with a variety of cellular activities
BHY08_09810	SM00487	DEAD-like helicases superfamily
BHY08_09810	SM00490	helicase superfamily c-terminal domain
BHY08_09825	SM00563	Phosphate acyltransferases
BHY08_09835	SM00465	GIY-YIG type nucleases (URI domain)
BHY08_09850	SM00346	helix_turn_helix isocitrate lyase regulation
BHY08_09910	SM00382	ATPases associated with a variety of cellular activities
BHY08_10035	SM00903	Flavin reductase like domain
BHY08_10050	SM00347	helix_turn_helix multiple antibiotic resistance protein
BHY08_10095	SM00382	ATPases associated with a variety of cellular activities
BHY08_10100	SM00382	ATPases associated with a variety of cellular activities
BHY08_10110	SM00662	RNA polymerases D
BHY08_10130	SM00316	Ribosomal protein S1-like RNA-binding domain
BHY08_10185	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
BHY08_10190	SM01374	BHY08_10190
BHY08_10210	SM00322	K homology RNA-binding domain
BHY08_10225	SM01382	BHY08_10225
BHY08_10225	SM01383	BHY08_10225
BHY08_10245	SM01403	BHY08_10245
BHY08_10255	SM00838	Elongation factor G C-terminus
BHY08_10255	SM00889	Elongation factor G, domain IV
BHY08_10275	SM00855	Phosphoglycerate mutase family
BHY08_10460	SM00448	cheY-homologous receiver domain
BHY08_10460	SM00862	Transcriptional regulatory protein, C terminal
BHY08_10465	SM00387	Histidine kinase-like ATPases
BHY08_10465	SM00388	His Kinase A (phosphoacceptor) domain
BHY08_10470	SM00936	Penicillin-binding protein 5, C-terminal domain 
BHY08_10530	SM01228	BHY08_10530
BHY08_10545	SM00322	K homology RNA-binding domain
BHY08_10545	SM00393	Putative single-stranded nucleic acids-binding domain
BHY08_10545	SM01245	BHY08_10545
BHY08_10580	SM00530	Helix-turn-helix XRE-family like proteins 
BHY08_10600	SM00422	helix_turn_helix, mercury resistance
BHY08_10615	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BHY08_10625	SM00829	Enoylreductase
