locus-tag class description FA707_00005 PF08299 Bacterial dnaA protein helix-turn-helix FA707_00005 PF00308 Bacterial dnaA protein FA707_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain FA707_00010 PF02767 DNA polymerase III beta subunit, central domain FA707_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain FA707_00020 PF02463 RecF/RecN/SMC N terminal domain FA707_00025 PF01751 Toprim domain FA707_00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FA707_00025 PF00986 DNA gyrase B subunit, carboxyl terminus FA707_00025 PF00204 DNA gyrase B FA707_00030 PF03989 DNA gyrase C-terminal domain, beta-propeller FA707_00030 PF00521 DNA gyrase/topoisomerase IV, subunit A FA707_00035 PF01250 Ribosomal protein S6 FA707_00040 PF00436 Single-strand binding protein family FA707_00045 PF01084 Ribosomal protein S18 FA707_00050 PF03948 Ribosomal protein L9, C-terminal domain FA707_00050 PF01281 Ribosomal protein L9, N-terminal domain FA707_00055 PF03796 DnaB-like helicase C terminal domain FA707_00055 PF00772 DnaB-like helicase N terminal domain FA707_00060 PF00709 Adenylosuccinate synthetase FA707_00065 PF02645 Uncharacterised protein, DegV family COG1307 FA707_00070 PF12848 ABC transporter FA707_00070 PF00005 ABC transporter FA707_00075 PF00348 Polyprenyl synthetase FA707_00085 PF07992 Pyridine nucleotide-disulphide oxidoreductase FA707_00095 PF02424 ApbE family FA707_00135 PF04203 Sortase domain FA707_00180 PF03099 Biotin/lipoate A/B protein ligase family FA707_00180 PF08279 HTH domain FA707_00180 PF02237 Biotin protein ligase C terminal domain FA707_00185 PF00356 Bacterial regulatory proteins, lacI family FA707_00190 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain FA707_00190 PF00591 Glycosyl transferase family, a/b domain FA707_00190 PF02885 Glycosyl transferase family, helical bundle domain FA707_00195 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FA707_00200 PF02608 ABC transporter substrate-binding protein PnrA-like FA707_00205 PF00005 ABC transporter FA707_00210 PF02653 Branched-chain amino acid transport system / permease component FA707_00215 PF02653 Branched-chain amino acid transport system / permease component FA707_00220 PF01676 Metalloenzyme superfamily FA707_00225 PF01048 Phosphorylase superfamily FA707_00230 PF01048 Phosphorylase superfamily FA707_00240 PF00313 'Cold-shock' DNA-binding domain FA707_00250 PF00005 ABC transporter FA707_00250 PF00664 ABC transporter transmembrane region FA707_00255 PF00465 Iron-containing alcohol dehydrogenase FA707_00270 PF00300 Histidine phosphatase superfamily (branch 1) FA707_00275 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) FA707_00280 PF00164 Ribosomal protein S12/S23 FA707_00285 PF00177 Ribosomal protein S7p/S5e FA707_00290 PF03144 Elongation factor Tu domain 2 FA707_00290 PF00009 Elongation factor Tu GTP binding domain FA707_00290 PF03764 Elongation factor G, domain IV FA707_00290 PF14492 Elongation Factor G, domain II FA707_00290 PF00679 Elongation factor G C-terminus FA707_00295 PF03143 Elongation factor Tu C-terminal domain FA707_00295 PF00009 Elongation factor Tu GTP binding domain FA707_00295 PF03144 Elongation factor Tu domain 2 FA707_00305 PF00338 Ribosomal protein S10p/S20e FA707_00310 PF00297 Ribosomal protein L3 FA707_00315 PF00573 Ribosomal protein L4/L1 family FA707_00320 PF00276 Ribosomal protein L23 FA707_00325 PF03947 Ribosomal Proteins L2, C-terminal domain FA707_00325 PF00181 Ribosomal Proteins L2, RNA binding domain FA707_00330 PF00203 Ribosomal protein S19 FA707_00335 PF00237 Ribosomal protein L22p/L17e FA707_00340 PF07650 KH domain FA707_00340 PF00189 Ribosomal protein S3, C-terminal domain FA707_00345 PF00252 Ribosomal protein L16p/L10e FA707_00350 PF00831 Ribosomal L29 protein FA707_00355 PF00366 Ribosomal protein S17 FA707_00360 PF00238 Ribosomal protein L14p/L23e FA707_00365 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 FA707_00365 PF00467 KOW motif FA707_00370 PF00673 ribosomal L5P family C-terminus FA707_00370 PF00281 Ribosomal protein L5 FA707_00375 PF00253 Ribosomal protein S14p/S29e FA707_00380 PF00410 Ribosomal protein S8 FA707_00385 PF00347 Ribosomal protein L6 FA707_00390 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast FA707_00395 PF03719 Ribosomal protein S5, C-terminal domain FA707_00395 PF00333 Ribosomal protein S5, N-terminal domain FA707_00400 PF00327 Ribosomal protein L30p/L7e FA707_00405 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A FA707_00410 PF00344 SecY translocase FA707_00415 PF05191 Adenylate kinase, active site lid FA707_00420 PF01176 Translation initiation factor 1A / IF-1 FA707_00425 PF00444 Ribosomal protein L36 FA707_00430 PF00416 Ribosomal protein S13/S18 FA707_00435 PF00411 Ribosomal protein S11 FA707_00440 PF01000 RNA polymerase Rpb3/RpoA insert domain FA707_00440 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain FA707_00440 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain FA707_00445 PF01196 Ribosomal protein L17 FA707_00450 PF00005 ABC transporter FA707_00455 PF00005 ABC transporter FA707_00460 PF02361 Cobalt transport protein FA707_00465 PF01416 tRNA pseudouridine synthase FA707_00470 PF02447 GntP family permease FA707_00475 PF02595 Glycerate kinase family FA707_00480 PF13556 PucR C-terminal helix-turn-helix domain FA707_00480 PF17853 GGDEF-like domain FA707_00480 PF05651 Putative sugar diacid recognition FA707_00485 PF00572 Ribosomal protein L13 FA707_00490 PF00380 Ribosomal protein S9/S16 FA707_00505 PF01580 FtsK/SpoIIIE family FA707_00505 PF09397 Ftsk gamma domain FA707_00505 PF17854 FtsK alpha domain FA707_00505 PF13491 4TM region of DNA translocase FtsK/SpoIIIE FA707_00540 PF04607 Region found in RelA / SpoT proteins FA707_00555 PF01380 SIS domain FA707_00555 PF01418 Helix-turn-helix domain, rpiR family FA707_00560 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FA707_00560 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain FA707_00565 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FA707_00565 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FA707_00570 PF00465 Iron-containing alcohol dehydrogenase FA707_00580 PF03613 PTS system mannose/fructose/sorbose family IID component FA707_00585 PF03830 PTS system sorbose subfamily IIB component FA707_00595 PF03610 PTS system fructose IIA component FA707_00595 PF03830 PTS system sorbose subfamily IIB component FA707_00600 PF03786 D-mannonate dehydratase (UxuA) FA707_00605 PF01081 KDPG and KHG aldolase FA707_00610 PF13419 Haloacid dehalogenase-like hydrolase FA707_00620 PF02811 PHP domain FA707_00625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FA707_00625 PF03466 LysR substrate binding domain FA707_00630 PF02803 Thiolase, C-terminal domain FA707_00630 PF00108 Thiolase, N-terminal domain FA707_00635 PF01144 Coenzyme A transferase FA707_00655 PF17853 GGDEF-like domain FA707_00655 PF12833 Helix-turn-helix domain FA707_00660 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FA707_00660 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FA707_00680 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FA707_00680 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FA707_00685 PF01053 Cys/Met metabolism PLP-dependent enzyme FA707_00690 PF01042 Endoribonuclease L-PSP FA707_00695 PF07992 Pyridine nucleotide-disulphide oxidoreductase FA707_00695 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FA707_00700 PF00375 Sodium:dicarboxylate symporter family FA707_00710 PF00206 Lyase FA707_00710 PF14698 Argininosuccinate lyase C-terminal FA707_00715 PF00764 Arginosuccinate synthase FA707_00725 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase FA707_00730 PF07729 FCD domain FA707_00730 PF00392 Bacterial regulatory proteins, gntR family FA707_00735 PF03600 Citrate transporter FA707_00745 PF00364 Biotin-requiring enzyme FA707_00750 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit FA707_00755 PF08218 Citrate lyase ligase C-terminal domain FA707_00755 PF00583 Acetyltransferase (GNAT) family FA707_00760 PF06857 Malonate decarboxylase delta subunit (MdcD) FA707_00765 PF03328 HpcH/HpaI aldolase/citrate lyase family FA707_00770 PF04223 Citrate lyase, alpha subunit (CitF) FA707_00780 PF00364 Biotin-requiring enzyme FA707_00780 PF00682 HMGL-like FA707_00780 PF02436 Conserved carboxylase domain FA707_00785 PF00390 Malic enzyme, N-terminal domain FA707_00785 PF03949 Malic enzyme, NAD binding domain FA707_00790 PF02705 K+ potassium transporter FA707_00810 PF08220 DeoR-like helix-turn-helix domain FA707_00810 PF00455 DeoR C terminal sensor domain FA707_00815 PF00294 pfkB family carbohydrate kinase FA707_00820 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FA707_00820 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FA707_00825 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain FA707_00825 PF00391 PEP-utilising enzyme, mobile domain FA707_00825 PF02896 PEP-utilising enzyme, TIM barrel domain FA707_00830 PF08279 HTH domain FA707_00830 PF00571 CBS domain FA707_00835 PF03618 Kinase/pyrophosphorylase FA707_00840 PF01207 Dihydrouridine synthase (Dus) FA707_00845 PF01047 MarR family FA707_00845 PF00480 ROK family FA707_00855 PF04616 Glycosyl hydrolases family 43 FA707_00855 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain FA707_00860 PF00005 ABC transporter FA707_00865 PF02653 Branched-chain amino acid transport system / permease component FA707_00875 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FA707_00875 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FA707_00900 PF00232 Glycosyl hydrolase family 1 FA707_00905 PF00367 phosphotransferase system, EIIB FA707_00905 PF02378 Phosphotransferase system, EIIC FA707_00905 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 FA707_00910 PF07702 UTRA domain FA707_00910 PF00392 Bacterial regulatory proteins, gntR family FA707_00915 PF08463 EcoEI R protein C-terminal FA707_00915 PF00271 Helicase conserved C-terminal domain FA707_00915 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) FA707_00915 PF04851 Type III restriction enzyme, res subunit FA707_00920 PF00293 NUDIX domain FA707_00925 PF17727 CtsR C-terminal dimerization domain FA707_00925 PF05848 CtsR N-terminal HTH domain FA707_00930 PF10431 C-terminal, D2-small domain, of ClpB protein FA707_00930 PF02861 Clp amino terminal domain, pathogenicity island component FA707_00930 PF17871 AAA lid domain FA707_00930 PF00004 ATPase family associated with various cellular activities (AAA) FA707_00930 PF07724 AAA domain (Cdc48 subfamily) FA707_00935 PF01136 Peptidase family U32 FA707_00940 PF01136 Peptidase family U32 FA707_00940 PF16325 Peptidase family U32 C-terminal domain FA707_00945 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FA707_00945 PF07992 Pyridine nucleotide-disulphide oxidoreductase FA707_00950 PF01654 Cytochrome bd terminal oxidase subunit I FA707_00955 PF02322 Cytochrome bd terminal oxidase subunit II FA707_00960 PF00005 ABC transporter FA707_00960 PF00664 ABC transporter transmembrane region FA707_00965 PF00005 ABC transporter FA707_00965 PF00664 ABC transporter transmembrane region FA707_00975 PF00348 Polyprenyl synthetase FA707_00990 PF03167 Uracil DNA glycosylase superfamily FA707_00995 PF01515 Phosphate acetyl/butaryl transferase FA707_01015 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE FA707_01025 PF08279 HTH domain FA707_01025 PF05043 Mga helix-turn-helix domain FA707_01025 PF00874 PRD domain FA707_01025 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FA707_01030 PF08240 Alcohol dehydrogenase GroES-like domain FA707_01030 PF00107 Zinc-binding dehydrogenase FA707_01040 PF00005 ABC transporter FA707_01040 PF08402 TOBE domain FA707_01045 PF00528 Binding-protein-dependent transport system inner membrane component FA707_01050 PF00528 Binding-protein-dependent transport system inner membrane component FA707_01055 PF13416 Bacterial extracellular solute-binding protein FA707_01065 PF00288 GHMP kinases N terminal domain FA707_01065 PF08544 GHMP kinases C terminal FA707_01070 PF03123 CAT RNA binding domain FA707_01070 PF00874 PRD domain FA707_01075 PF00367 phosphotransferase system, EIIB FA707_01075 PF02378 Phosphotransferase system, EIIC FA707_01075 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 FA707_01080 PF13277 YmdB-like protein FA707_01090 PF05190 MutS family domain IV FA707_01090 PF01624 MutS domain I FA707_01090 PF05192 MutS domain III FA707_01090 PF05188 MutS domain II FA707_01090 PF00488 MutS domain V FA707_01095 PF08676 MutL C terminal dimerisation domain FA707_01095 PF01119 DNA mismatch repair protein, C-terminal domain FA707_01100 PF02545 Maf-like protein FA707_01105 PF01641 SelR domain FA707_01115 PF01263 Aldose 1-epimerase FA707_01120 PF02673 Bacitracin resistance protein BacA FA707_01125 PF00005 ABC transporter FA707_01130 PF00528 Binding-protein-dependent transport system inner membrane component FA707_01155 PF02146 Sir2 family FA707_01160 PF01817 Chorismate mutase type II FA707_01160 PF00793 DAHP synthetase I family FA707_01165 PF01381 Helix-turn-helix FA707_01180 PF01238 Phosphomannose isomerase type I FA707_01185 PF02811 PHP domain FA707_01185 PF00929 Exonuclease FA707_01185 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FA707_01185 PF11490 DNA polymerase III polC-type N-terminus II FA707_01185 PF14579 Helix-hairpin-helix motif FA707_01185 PF07733 Bacterial DNA polymerase III alpha NTPase domain FA707_01190 PF03372 Endonuclease/Exonuclease/phosphatase family FA707_01195 PF13673 Acetyltransferase (GNAT) domain FA707_01200 PF01565 FAD binding domain FA707_01200 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain FA707_01210 PF00313 'Cold-shock' DNA-binding domain FA707_01215 PF00166 Chaperonin 10 Kd subunit FA707_01220 PF00118 TCP-1/cpn60 chaperonin family FA707_01230 PF00367 phosphotransferase system, EIIB FA707_01230 PF02378 Phosphotransferase system, EIIC FA707_01235 PF16657 Maltogenic Amylase, C-terminal domain FA707_01235 PF00128 Alpha amylase, catalytic domain FA707_01240 PF00392 Bacterial regulatory proteins, gntR family FA707_01240 PF07702 UTRA domain FA707_01250 PF16363 GDP-mannose 4,6 dehydratase FA707_01255 PF08903 Domain of unknown function (DUF1846) FA707_01260 PF00478 IMP dehydrogenase / GMP reductase domain FA707_01260 PF00571 CBS domain FA707_01265 PF10531 SLBB domain FA707_01270 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FA707_01275 PF13567 Domain of unknown function (DUF4131) FA707_01275 PF00753 Metallo-beta-lactamase superfamily FA707_01275 PF03772 Competence protein FA707_01280 PF00570 HRDC domain FA707_01280 PF09382 RQC domain FA707_01280 PF16124 RecQ zinc-binding FA707_01280 PF00271 Helicase conserved C-terminal domain FA707_01280 PF00270 DEAD/DEAH box helicase FA707_01285 PF06144 DNA polymerase III, delta subunit FA707_01290 PF09515 Thiamine transporter protein (Thia_YuaJ) FA707_01295 PF02535 ZIP Zinc transporter FA707_01305 PF01522 Polysaccharide deacetylase FA707_01310 PF01649 Ribosomal protein S20 FA707_01315 PF01384 Phosphate transporter family FA707_01320 PF01865 Protein of unknown function DUF47 FA707_01325 PF01063 Amino-transferase class IV FA707_01345 PF02464 Competence-damaged protein FA707_01345 PF18146 Damage-inducible protein CinA KH domain FA707_01345 PF00994 Probable molybdopterin binding domain FA707_01350 PF00154 recA bacterial DNA recombination protein FA707_01355 PF08546 Ketopantoate reductase PanE/ApbA C terminal FA707_01355 PF02558 Ketopantoate reductase PanE/ApbA FA707_01365 PF12072 Domain of unknown function (DUF3552) FA707_01365 PF01966 HD domain FA707_01365 PF00013 KH domain FA707_01370 PF00005 ABC transporter FA707_01375 PF00950 ABC 3 transport family FA707_01380 PF00156 Phosphoribosyl transferase domain FA707_01380 PF09182 Bacterial purine repressor, N-terminal FA707_01385 PF00132 Bacterial transferase hexapeptide (six repeats) FA707_01385 PF00483 Nucleotidyl transferase FA707_01390 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase FA707_01390 PF14572 Phosphoribosyl synthetase-associated domain FA707_01400 PF01741 Large-conductance mechanosensitive channel, MscL FA707_01405 PF05193 Peptidase M16 inactive domain FA707_01410 PF00675 Insulinase (Peptidase family M16) FA707_01410 PF05193 Peptidase M16 inactive domain FA707_01420 PF13464 Domain of unknown function (DUF4115) FA707_01425 PF01066 CDP-alcohol phosphatidyltransferase FA707_01445 PF00486 Transcriptional regulatory protein, C terminal FA707_01445 PF00072 Response regulator receiver domain FA707_01450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FA707_01450 PF00672 HAMP domain FA707_01450 PF00512 His Kinase A (phospho-acceptor) domain FA707_01455 PF05256 Uncharacterised protein family (UPF0223) FA707_01460 PF00459 Inositol monophosphatase family FA707_01465 PF00679 Elongation factor G C-terminus FA707_01465 PF14492 Elongation Factor G, domain II FA707_01465 PF00009 Elongation factor Tu GTP binding domain FA707_01465 PF03144 Elongation factor Tu domain 2 FA707_01470 PF00392 Bacterial regulatory proteins, gntR family FA707_01470 PF07702 UTRA domain FA707_01475 PF01301 Glycosyl hydrolases family 35 FA707_01480 PF03830 PTS system sorbose subfamily IIB component FA707_01485 PF03609 PTS system sorbose-specific iic component FA707_01490 PF03613 PTS system mannose/fructose/sorbose family IID component FA707_01500 PF01380 SIS domain FA707_01505 PF01791 DeoC/LacD family aldolase FA707_01510 PF01116 Fructose-bisphosphate aldolase class-II FA707_01520 PF00232 Glycosyl hydrolase family 1 FA707_01535 PF00437 Type II/IV secretion system protein FA707_01540 PF00482 Type II secretion system (T2SS), protein F FA707_01545 PF07963 Prokaryotic N-terminal methylation motif FA707_01570 PF08264 Anticodon-binding domain of tRNA FA707_01570 PF01588 Putative tRNA binding domain FA707_01570 PF09334 tRNA synthetases class I (M) FA707_01575 PF01026 TatD related DNase FA707_01580 PF13331 Domain of unknown function (DUF4093) FA707_01580 PF01751 Toprim domain FA707_01585 PF00398 Ribosomal RNA adenine dimethylase FA707_01590 PF02770 Acyl-CoA dehydrogenase, middle domain FA707_01590 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FA707_01590 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FA707_01595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FA707_01595 PF03466 LysR substrate binding domain FA707_01600 PF00108 Thiolase, N-terminal domain FA707_01600 PF02803 Thiolase, C-terminal domain FA707_01605 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FA707_01605 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FA707_01605 PF02770 Acyl-CoA dehydrogenase, middle domain FA707_01610 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FA707_01610 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FA707_01615 PF00378 Enoyl-CoA hydratase/isomerase FA707_01620 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain FA707_01620 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain FA707_01625 PF00753 Metallo-beta-lactamase superfamily FA707_01630 PF03459 TOBE domain FA707_01630 PF17912 MalK OB fold domain FA707_01630 PF00005 ABC transporter FA707_01640 PF03372 Endonuclease/Exonuclease/phosphatase family FA707_01645 PF02378 Phosphotransferase system, EIIC FA707_01645 PF00367 phosphotransferase system, EIIB FA707_01645 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 FA707_01650 PF03636 Glycosyl hydrolase family 65, N-terminal domain FA707_01650 PF03633 Glycosyl hydrolase family 65, C-terminal domain FA707_01650 PF03632 Glycosyl hydrolase family 65 central catalytic domain FA707_01655 PF13419 Haloacid dehalogenase-like hydrolase FA707_01660 PF01263 Aldose 1-epimerase FA707_01665 PF00356 Bacterial regulatory proteins, lacI family FA707_01670 PF00128 Alpha amylase, catalytic domain FA707_01675 PF00128 Alpha amylase, catalytic domain FA707_01675 PF16657 Maltogenic Amylase, C-terminal domain FA707_01680 PF02903 Alpha amylase, N-terminal ig-like domain FA707_01680 PF00128 Alpha amylase, catalytic domain FA707_01690 PF00528 Binding-protein-dependent transport system inner membrane component FA707_01695 PF00528 Binding-protein-dependent transport system inner membrane component FA707_01700 PF13520 Amino acid permease FA707_01715 PF00356 Bacterial regulatory proteins, lacI family FA707_01720 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain FA707_01720 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain FA707_01725 PF10509 Galactokinase galactose-binding signature FA707_01725 PF08544 GHMP kinases C terminal FA707_01725 PF00288 GHMP kinases N terminal domain FA707_01730 PF10282 Lactonase, 7-bladed beta-propeller FA707_01740 PF01594 AI-2E family transporter FA707_01745 PF02525 Flavodoxin-like fold FA707_01755 PF05257 CHAP domain FA707_01755 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase FA707_01760 PF00884 Sulfatase FA707_01765 PF10672 S-adenosylmethionine-dependent methyltransferase FA707_01765 PF17785 PUA-like domain FA707_01770 PF04073 Aminoacyl-tRNA editing domain FA707_01775 PF06100 MCRA family FA707_01795 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain FA707_01795 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase FA707_01800 PF01497 Periplasmic binding protein FA707_01805 PF01032 FecCD transport family FA707_01810 PF00005 ABC transporter FA707_01820 PF00342 Phosphoglucose isomerase FA707_01825 PF01416 tRNA pseudouridine synthase FA707_01830 PF13520 Amino acid permease FA707_01840 PF03641 Possible lysine decarboxylase FA707_01845 PF02525 Flavodoxin-like fold FA707_01855 PF02378 Phosphotransferase system, EIIC FA707_01865 PF00933 Glycosyl hydrolase family 3 N terminal domain FA707_01875 PF00005 ABC transporter FA707_01880 PF00950 ABC 3 transport family FA707_01885 PF01297 Zinc-uptake complex component A periplasmic FA707_01890 PF00707 Translation initiation factor IF-3, C-terminal domain FA707_01890 PF05198 Translation initiation factor IF-3, N-terminal domain FA707_01895 PF01632 Ribosomal protein L35 FA707_01900 PF00453 Ribosomal protein L20 FA707_01905 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FA707_01905 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FA707_01905 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FA707_01905 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FA707_01910 PF01022 Bacterial regulatory protein, arsR family FA707_01915 PF03144 Elongation factor Tu domain 2 FA707_01915 PF00009 Elongation factor Tu GTP binding domain FA707_01915 PF16658 Class II release factor RF3, C-terminal domain FA707_01920 PF03734 L,D-transpeptidase catalytic domain FA707_01925 PF03358 NADPH-dependent FMN reductase FA707_01935 PF07687 Peptidase dimerisation domain FA707_01935 PF01546 Peptidase family M20/M25/M40 FA707_01940 PF03129 Anticodon binding domain FA707_01940 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FA707_01940 PF09180 Prolyl-tRNA synthetase, C-terminal FA707_01950 PF01938 TRAM domain FA707_01950 PF05958 tRNA (Uracil-5-)-methyltransferase FA707_01955 PF00392 Bacterial regulatory proteins, gntR family FA707_01960 PF00005 ABC transporter FA707_01980 PF12704 MacB-like periplasmic core domain FA707_01980 PF00005 ABC transporter FA707_01980 PF02687 FtsX-like permease family FA707_01985 PF00156 Phosphoribosyl transferase domain FA707_01990 PF00860 Permease family FA707_01995 PF00689 Cation transporting ATPase, C-terminus FA707_01995 PF00690 Cation transporter/ATPase, N-terminus FA707_02015 PF11975 Family 4 glycosyl hydrolase C-terminal domain FA707_02015 PF02056 Family 4 glycosyl hydrolase FA707_02025 PF03466 LysR substrate binding domain FA707_02025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FA707_02035 PF00005 ABC transporter FA707_02050 PF00324 Amino acid permease FA707_02055 PF02678 Pirin FA707_02055 PF05726 Pirin C-terminal cupin domain FA707_02060 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FA707_02060 PF07992 Pyridine nucleotide-disulphide oxidoreductase FA707_02065 PF13580 SIS domain FA707_02070 PF01418 Helix-turn-helix domain, rpiR family FA707_02070 PF01380 SIS domain FA707_02080 PF02687 FtsX-like permease family FA707_02085 PF00005 ABC transporter FA707_02100 PF00512 His Kinase A (phospho-acceptor) domain FA707_02100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FA707_02100 PF00672 HAMP domain FA707_02105 PF00072 Response regulator receiver domain FA707_02105 PF00486 Transcriptional regulatory protein, C terminal FA707_02110 PF00664 ABC transporter transmembrane region FA707_02110 PF00005 ABC transporter FA707_02115 PF00664 ABC transporter transmembrane region FA707_02115 PF00005 ABC transporter FA707_02120 PF00689 Cation transporting ATPase, C-terminus FA707_02120 PF00690 Cation transporter/ATPase, N-terminus FA707_02125 PF00230 Major intrinsic protein FA707_02130 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FA707_02130 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FA707_02140 PF01266 FAD dependent oxidoreductase FA707_02145 PF07992 Pyridine nucleotide-disulphide oxidoreductase FA707_02145 PF04324 BFD-like [2Fe-2S] binding domain FA707_02155 PF00258 Flavodoxin FA707_02165 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FA707_02170 PF02378 Phosphotransferase system, EIIC FA707_02180 PF00232 Glycosyl hydrolase family 1 FA707_02195 PF03702 Anhydro-N-acetylmuramic acid kinase FA707_02200 PF13537 Glutamine amidotransferase domain FA707_02200 PF00733 Asparagine synthase FA707_02205 PF13673 Acetyltransferase (GNAT) domain FA707_02210 PF01594 AI-2E family transporter FA707_02215 PF01595 Cyclin M transmembrane N-terminal domain FA707_02215 PF03471 Transporter associated domain FA707_02215 PF00571 CBS domain FA707_02220 PF13597 Anaerobic ribonucleoside-triphosphate reductase FA707_02220 PF03477 ATP cone domain FA707_02230 PF05343 M42 glutamyl aminopeptidase FA707_02235 PF12706 Beta-lactamase superfamily domain FA707_02240 PF10437 Bacterial lipoate protein ligase C-terminus FA707_02240 PF03099 Biotin/lipoate A/B protein ligase family FA707_02250 PF00579 tRNA synthetases class I (W and Y) FA707_02255 PF03960 ArsC family FA707_02260 PF05389 Negative regulator of genetic competence (MecA) FA707_02265 PF13419 Haloacid dehalogenase-like hydrolase FA707_02270 PF00268 Ribonucleotide reductase, small chain FA707_02275 PF08343 Ribonucleotide reductase N-terminal FA707_02275 PF00317 Ribonucleotide reductase, all-alpha domain FA707_02275 PF02867 Ribonucleotide reductase, barrel domain FA707_02280 PF07972 NrdI Flavodoxin like FA707_02285 PF00462 Glutaredoxin FA707_02295 PF01061 ABC-2 type transporter FA707_02305 PF14437 MafB19-like deaminase FA707_02330 PF12169 DNA polymerase III subunits gamma and tau domain III FA707_02335 PF02575 YbaB/EbfC DNA-binding family FA707_02340 PF13662 Toprim domain FA707_02340 PF02132 RecR protein FA707_02345 PF02223 Thymidylate kinase FA707_02350 PF06153 Cyclic-di-AMP receptor FA707_02355 PF09115 DNA polymerase III, delta subunit, C terminal FA707_02360 PF04468 PSP1 C-terminal conserved region FA707_02365 PF06156 Initiation control protein YabA FA707_02370 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FA707_02435 PF00313 'Cold-shock' DNA-binding domain FA707_02440 PF13378 Enolase C-terminal domain-like FA707_02440 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FA707_02445 PF12697 Alpha/beta hydrolase family FA707_02450 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FA707_02450 PF16582 Middle domain of thiamine pyrophosphate FA707_02450 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FA707_02455 PF00425 chorismate binding enzyme FA707_02460 PF00501 AMP-binding enzyme FA707_02460 PF13193 AMP-binding enzyme C-terminal domain FA707_02465 PF00378 Enoyl-CoA hydratase/isomerase FA707_02470 PF03061 Thioesterase superfamily FA707_02475 PF00890 FAD binding domain FA707_02475 PF14537 Cytochrome c3 FA707_02485 PF00501 AMP-binding enzyme FA707_02485 PF13193 AMP-binding enzyme C-terminal domain FA707_02490 PF13520 Amino acid permease FA707_02495 PF00155 Aminotransferase class I and II FA707_02500 PF01370 NAD dependent epimerase/dehydratase family FA707_02505 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FA707_02505 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FA707_02505 PF03129 Anticodon binding domain FA707_02505 PF02824 TGS domain FA707_02510 PF00905 Penicillin binding protein transpeptidase domain FA707_02510 PF03717 Penicillin-binding Protein dimerisation domain FA707_02515 PF00471 Ribosomal protein L33 FA707_02525 PF13407 Periplasmic binding protein domain FA707_02525 PF00356 Bacterial regulatory proteins, lacI family FA707_02530 PF02378 Phosphotransferase system, EIIC FA707_02530 PF00367 phosphotransferase system, EIIB FA707_02535 PF00251 Glycosyl hydrolases family 32 N-terminal domain FA707_02535 PF08244 Glycosyl hydrolases family 32 C terminal FA707_02540 PF00480 ROK family FA707_02545 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FA707_02550 PF14622 Ribonuclease-III-like FA707_02550 PF00035 Double-stranded RNA binding motif FA707_02555 PF06470 SMC proteins Flexible Hinge Domain FA707_02555 PF02463 RecF/RecN/SMC N terminal domain FA707_02565 PF02881 SRP54-type protein, helical bundle domain FA707_02565 PF00448 SRP54-type protein, GTPase domain FA707_02595 PF00300 Histidine phosphatase superfamily (branch 1) FA707_02600 PF00874 PRD domain FA707_02600 PF00158 Sigma-54 interaction domain FA707_02600 PF03610 PTS system fructose IIA component FA707_02605 PF03830 PTS system sorbose subfamily IIB component FA707_02605 PF03610 PTS system fructose IIA component FA707_02610 PF03830 PTS system sorbose subfamily IIB component FA707_02610 PF03610 PTS system fructose IIA component FA707_02615 PF03609 PTS system sorbose-specific iic component FA707_02620 PF03613 PTS system mannose/fructose/sorbose family IID component FA707_02630 PF13936 Helix-turn-helix domain FA707_02660 PF13519 von Willebrand factor type A domain FA707_02670 PF00557 Metallopeptidase family M24 FA707_02670 PF01321 Creatinase/Prolidase N-terminal domain FA707_02675 PF09285 Elongation factor P, C-terminal FA707_02675 PF08207 Elongation factor P (EF-P) KOW-like domain FA707_02675 PF01132 Elongation factor P (EF-P) OB domain FA707_02680 PF03780 Asp23 family, cell envelope-related function FA707_02685 PF01029 NusB family FA707_02690 PF02601 Exonuclease VII, large subunit FA707_02690 PF13742 OB-fold nucleic acid binding domain FA707_02695 PF02609 Exonuclease VII small subunit FA707_02700 PF00348 Polyprenyl synthetase FA707_02705 PF01728 FtsJ-like methyltransferase FA707_02705 PF01479 S4 domain FA707_02710 PF13476 AAA domain FA707_02720 PF03618 Kinase/pyrophosphorylase FA707_02725 PF01475 Ferric uptake regulator family FA707_02730 PF01165 Ribosomal protein S21 FA707_02735 PF09424 Yqey-like protein FA707_02770 PF00829 Ribosomal prokaryotic L21 protein FA707_02780 PF01016 Ribosomal L27 protein FA707_02790 PF01496 V-type ATPase 116kDa subunit family FA707_02795 PF00137 ATP synthase subunit C FA707_02805 PF01992 ATP synthase (C/AC39) subunit FA707_02810 PF01990 ATP synthase (F/14-kDa) subunit FA707_02815 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FA707_02815 PF02874 ATP synthase alpha/beta family, beta-barrel domain FA707_02815 PF16886 ATPsynthase alpha/beta subunit N-term extension FA707_02820 PF02874 ATP synthase alpha/beta family, beta-barrel domain FA707_02820 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FA707_02825 PF01813 ATP synthase subunit D FA707_02830 PF02386 Cation transport protein FA707_02835 PF00962 Adenosine/AMP deaminase FA707_02845 PF01694 Rhomboid family FA707_02855 PF00480 ROK family FA707_02870 PF17871 AAA lid domain FA707_02870 PF10431 C-terminal, D2-small domain, of ClpB protein FA707_02870 PF07724 AAA domain (Cdc48 subfamily) FA707_02870 PF00004 ATPase family associated with various cellular activities (AAA) FA707_02875 PF00381 PTS HPr component phosphorylation site FA707_02880 PF05524 PEP-utilising enzyme, N-terminal FA707_02880 PF02896 PEP-utilising enzyme, TIM barrel domain FA707_02880 PF00391 PEP-utilising enzyme, mobile domain FA707_02885 PF00534 Glycosyl transferases group 1 FA707_02885 PF13439 Glycosyltransferase Family 4 FA707_02890 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FA707_02890 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FA707_02905 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FA707_02905 PF05698 Bacterial trigger factor protein (TF) C-terminus FA707_02905 PF05697 Bacterial trigger factor protein (TF) FA707_02910 PF10431 C-terminal, D2-small domain, of ClpB protein FA707_02910 PF06689 ClpX C4-type zinc finger FA707_02910 PF07724 AAA domain (Cdc48 subfamily) FA707_02915 PF01926 50S ribosome-binding GTPase FA707_02925 PF01926 50S ribosome-binding GTPase FA707_02930 PF01985 CRS1 / YhbY (CRM) domain FA707_02935 PF01467 Cytidylyltransferase-like FA707_02940 PF01966 HD domain FA707_02950 PF13649 Methyltransferase domain FA707_02960 PF00478 IMP dehydrogenase / GMP reductase domain FA707_02970 PF08543 Phosphomethylpyrimidine kinase FA707_02975 PF08543 Phosphomethylpyrimidine kinase FA707_02980 PF00155 Aminotransferase class I and II FA707_02980 PF00392 Bacterial regulatory proteins, gntR family FA707_02990 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FA707_02990 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FA707_02995 PF00550 Phosphopantetheine attachment site FA707_03000 PF03060 Nitronate monooxygenase FA707_03005 PF00698 Acyl transferase domain FA707_03015 PF00109 Beta-ketoacyl synthase, N-terminal domain FA707_03015 PF02801 Beta-ketoacyl synthase, C-terminal domain FA707_03020 PF00364 Biotin-requiring enzyme FA707_03025 PF07977 FabA-like domain FA707_03030 PF00289 Biotin carboxylase, N-terminal domain FA707_03030 PF02785 Biotin carboxylase C-terminal domain FA707_03030 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FA707_03035 PF01039 Carboxyl transferase domain FA707_03040 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit FA707_03060 PF01266 FAD dependent oxidoreductase FA707_03065 PF16916 Dimerisation domain of Zinc Transporter FA707_03065 PF01545 Cation efflux family FA707_03070 PF00120 Glutamine synthetase, catalytic domain FA707_03070 PF03951 Glutamine synthetase, beta-Grasp domain FA707_03090 PF04542 Sigma-70 region 2 FA707_03090 PF08281 Sigma-70, region 4 FA707_03120 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase FA707_03125 PF00294 pfkB family carbohydrate kinase FA707_03130 PF00814 Glycoprotease family FA707_03145 PF00814 Glycoprotease family FA707_03150 PF04565 RNA polymerase Rpb2, domain 3 FA707_03150 PF10385 RNA polymerase beta subunit external 1 domain FA707_03150 PF00562 RNA polymerase Rpb2, domain 6 FA707_03150 PF04560 RNA polymerase Rpb2, domain 7 FA707_03150 PF04561 RNA polymerase Rpb2, domain 2 FA707_03150 PF04563 RNA polymerase beta subunit FA707_03155 PF05000 RNA polymerase Rpb1, domain 4 FA707_03155 PF04998 RNA polymerase Rpb1, domain 5 FA707_03155 PF04983 RNA polymerase Rpb1, domain 3 FA707_03155 PF00623 RNA polymerase Rpb1, domain 2 FA707_03155 PF04997 RNA polymerase Rpb1, domain 1 FA707_03180 PF02618 YceG-like family FA707_03185 PF01272 Transcription elongation factor, GreA/GreB, C-term FA707_03185 PF03449 Transcription elongation factor, N-terminal FA707_03195 PF00672 HAMP domain FA707_03195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FA707_03195 PF07730 Histidine kinase FA707_03200 PF00072 Response regulator receiver domain FA707_03200 PF00196 Bacterial regulatory proteins, luxR family FA707_03205 PF02080 TrkA-C domain FA707_03205 PF02254 TrkA-N domain FA707_03210 PF01521 Iron-sulphur cluster biosynthesis FA707_03220 PF02777 Iron/manganese superoxide dismutases, C-terminal domain FA707_03220 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain FA707_03225 PF07408 Protein of unknown function (DUF1507) FA707_03230 PF01098 Cell cycle protein FA707_03235 PF02785 Biotin carboxylase C-terminal domain FA707_03235 PF00289 Biotin carboxylase, N-terminal domain FA707_03235 PF00364 Biotin-requiring enzyme FA707_03235 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FA707_03235 PF00682 HMGL-like FA707_03235 PF02436 Conserved carboxylase domain FA707_03245 PF06133 Control of competence regulator ComK, YlbF/YmcA FA707_03250 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) FA707_03260 PF01467 Cytidylyltransferase-like FA707_03265 PF13180 PDZ domain FA707_03265 PF05362 Lon protease (S16) C-terminal proteolytic domain FA707_03270 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain FA707_03270 PF14490 Helix-hairpin-helix containing domain FA707_03270 PF13538 UvrD-like helicase C-terminal domain FA707_03285 PF08245 Mur ligase middle domain FA707_03285 PF01225 Mur ligase family, catalytic domain FA707_03285 PF02875 Mur ligase family, glutamate ligase domain FA707_03290 PF01027 Inhibitor of apoptosis-promoting Bax1 FA707_03295 PF01367 5'-3' exonuclease, C-terminal SAM fold FA707_03295 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain FA707_03295 PF00476 DNA polymerase family A FA707_03300 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain FA707_03300 PF06827 Zinc finger found in FPG and IleRS FA707_03300 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain FA707_03305 PF01121 Dephospho-CoA kinase FA707_03310 PF03477 ATP cone domain FA707_03320 PF01695 IstB-like ATP binding protein FA707_03320 PF07319 Primosomal protein DnaI N-terminus FA707_03330 PF01783 Ribosomal L32p protein family FA707_03335 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain FA707_03335 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FA707_03340 PF00486 Transcriptional regulatory protein, C terminal FA707_03340 PF00072 Response regulator receiver domain FA707_03345 PF00512 His Kinase A (phospho-acceptor) domain FA707_03345 PF18719 ArlS sensor domain FA707_03345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FA707_03355 PF02096 60Kd inner membrane protein FA707_03360 PF00708 Acylphosphatase FA707_03365 PF08032 RNA 2'-O ribose methyltransferase substrate binding FA707_03365 PF00588 SpoU rRNA Methylase family FA707_03375 PF01638 HxlR-like helix-turn-helix FA707_03380 PF01409 tRNA synthetases class II core domain (F) FA707_03380 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain FA707_03385 PF01588 Putative tRNA binding domain FA707_03385 PF03484 tRNA synthetase B5 domain FA707_03385 PF03147 Ferredoxin-fold anticodon binding domain FA707_03385 PF03483 B3/4 domain FA707_03385 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain FA707_03400 PF01177 Asp/Glu/Hydantoin racemase FA707_03405 PF01138 3' exoribonuclease family, domain 1 FA707_03405 PF03725 3' exoribonuclease family, domain 2 FA707_03425 PF01022 Bacterial regulatory protein, arsR family FA707_03440 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV FA707_03445 PF05670 NFACT protein RNA binding domain FA707_03465 PF01595 Cyclin M transmembrane N-terminal domain FA707_03465 PF03471 Transporter associated domain FA707_03465 PF00571 CBS domain FA707_03475 PF00367 phosphotransferase system, EIIB FA707_03475 PF02378 Phosphotransferase system, EIIC FA707_03475 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 FA707_03480 PF00232 Glycosyl hydrolase family 1 FA707_03485 PF01425 Amidase FA707_03495 PF01569 PAP2 superfamily FA707_03500 PF00893 Small Multidrug Resistance protein FA707_03505 PF00893 Small Multidrug Resistance protein FA707_03515 PF00690 Cation transporter/ATPase, N-terminus FA707_03515 PF00689 Cation transporting ATPase, C-terminus FA707_03520 PF06081 Aromatic acid exporter family member 1 FA707_03525 PF13520 Amino acid permease FA707_03540 PF02378 Phosphotransferase system, EIIC FA707_03540 PF00367 phosphotransferase system, EIIB FA707_03545 PF00206 Lyase FA707_03545 PF10397 Adenylosuccinate lyase C-terminus FA707_03550 PF04794 YdjC-like protein FA707_03555 PF01380 SIS domain FA707_03555 PF01418 Helix-turn-helix domain, rpiR family FA707_03560 PF00390 Malic enzyme, N-terminal domain FA707_03560 PF03949 Malic enzyme, NAD binding domain FA707_03565 PF10415 Fumarase C C-terminus FA707_03565 PF00206 Lyase FA707_03570 PF01757 Acyltransferase family FA707_03580 PF00155 Aminotransferase class I and II FA707_03585 PF00005 ABC transporter FA707_03590 PF00528 Binding-protein-dependent transport system inner membrane component FA707_03595 PF14748 Pyrroline-5-carboxylate reductase dimerisation FA707_03595 PF03807 NADP oxidoreductase coenzyme F420-dependent FA707_03600 PF09586 Bacterial membrane protein YfhO FA707_03605 PF00144 Beta-lactamase FA707_03610 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) FA707_03610 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 FA707_03615 PF00265 Thymidine kinase FA707_03620 PF03462 PCRF domain FA707_03620 PF00472 RF-1 domain FA707_03625 PF17827 PrmC N-terminal domain FA707_03625 PF05175 Methyltransferase small domain FA707_03630 PF01300 Telomere recombination FA707_03630 PF03481 Putative GTP-binding controlling metal-binding FA707_03635 PF00464 Serine hydroxymethyltransferase FA707_03645 PF01098 Cell cycle protein FA707_03650 PF00664 ABC transporter transmembrane region FA707_03650 PF00005 ABC transporter FA707_03655 PF00005 ABC transporter FA707_03655 PF00664 ABC transporter transmembrane region FA707_03660 PF00392 Bacterial regulatory proteins, gntR family FA707_03660 PF07702 UTRA domain FA707_03670 PF01979 Amidohydrolase family FA707_03675 PF03841 L-seryl-tRNA selenium transferase FA707_03680 PF07071 KDGP aldolase FA707_03685 PF00294 pfkB family carbohydrate kinase FA707_03705 PF00334 Nucleoside diphosphate kinase FA707_03710 PF06874 Firmicute fructose-1,6-bisphosphatase FA707_03735 PF00056 lactate/malate dehydrogenase, NAD binding domain FA707_03735 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain FA707_03745 PF00072 Response regulator receiver domain FA707_03745 PF00486 Transcriptional regulatory protein, C terminal FA707_03750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FA707_03750 PF00512 His Kinase A (phospho-acceptor) domain FA707_03755 PF18317 Shikimate 5'-dehydrogenase C-terminal domain FA707_03755 PF08501 Shikimate dehydrogenase substrate binding domain FA707_03760 PF18152 DAHP synthase ferredoxin-like domain FA707_03760 PF00793 DAHP synthetase I family FA707_03765 PF01761 3-dehydroquinate synthase FA707_03770 PF01264 Chorismate synthase FA707_03775 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FA707_03780 PF01202 Shikimate kinase FA707_03790 PF02645 Uncharacterised protein, DegV family COG1307 FA707_03800 PF02811 PHP domain FA707_03800 PF14579 Helix-hairpin-helix motif FA707_03800 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FA707_03800 PF01336 OB-fold nucleic acid binding domain FA707_03800 PF07733 Bacterial DNA polymerase III alpha NTPase domain FA707_03805 PF00365 Phosphofructokinase FA707_03810 PF02887 Pyruvate kinase, alpha/beta domain FA707_03810 PF00391 PEP-utilising enzyme, mobile domain FA707_03810 PF00224 Pyruvate kinase, barrel domain FA707_03815 PF03572 Peptidase family S41 FA707_03815 PF01471 Putative peptidoglycan binding domain FA707_03815 PF17820 PDZ domain FA707_03820 PF10502 Signal peptidase, peptidase S26 FA707_03825 PF01926 50S ribosome-binding GTPase FA707_03830 PF01351 Ribonuclease HII FA707_03835 PF02481 DNA recombination-mediator protein A FA707_03835 PF18255 DNA processing protein A sterile alpha motif domain FA707_03840 PF01131 DNA topoisomerase FA707_03840 PF01751 Toprim domain FA707_03840 PF01396 Topoisomerase DNA binding C4 zinc finger FA707_03845 PF01134 Glucose inhibited division protein A FA707_03850 PF02899 Phage integrase, N-terminal SAM-like domain FA707_03850 PF00589 Phage integrase family FA707_03855 PF00227 Proteasome subunit FA707_03860 PF00004 ATPase family associated with various cellular activities (AAA) FA707_03860 PF10431 C-terminal, D2-small domain, of ClpB protein FA707_03860 PF07724 AAA domain (Cdc48 subfamily) FA707_03870 PF02660 Glycerol-3-phosphate acyltransferase FA707_03875 PF01168 Alanine racemase, N-terminal domain FA707_03875 PF00842 Alanine racemase, C-terminal domain FA707_03880 PF00291 Pyridoxal-phosphate dependent enzyme FA707_03895 PF02151 UvrB/uvrC motif FA707_03895 PF04851 Type III restriction enzyme, res subunit FA707_03895 PF12344 Ultra-violet resistance protein B FA707_03895 PF00271 Helicase conserved C-terminal domain FA707_03895 PF17757 UvrB interaction domain FA707_03900 PF17755 UvrA DNA-binding domain FA707_03900 PF00005 ABC transporter FA707_03900 PF17760 UvrA interaction domain FA707_03905 PF03668 P-loop ATPase protein family FA707_03910 PF01933 Uncharacterised protein family UPF0052 FA707_03915 PF10298 WhiA N-terminal LAGLIDADG-like domain FA707_03915 PF14527 WhiA LAGLIDADG-like domain FA707_03915 PF02650 WhiA C-terminal HTH domain FA707_03925 PF00574 Clp protease FA707_03940 PF03840 Preprotein translocase SecG subunit FA707_03950 PF17876 Cold shock domain FA707_03950 PF00575 S1 RNA binding domain FA707_03950 PF00773 RNB domain FA707_03950 PF08206 Ribonuclease B OB domain FA707_03955 PF01668 SmpB protein FA707_03960 PF00119 ATP synthase A chain FA707_03965 PF00137 ATP synthase subunit C FA707_03970 PF00430 ATP synthase B/B' CF(0) FA707_03975 PF00213 ATP synthase delta (OSCP) subunit FA707_03980 PF00306 ATP synthase alpha/beta chain, C terminal domain FA707_03980 PF02874 ATP synthase alpha/beta family, beta-barrel domain FA707_03980 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FA707_03985 PF00231 ATP synthase FA707_03990 PF02874 ATP synthase alpha/beta family, beta-barrel domain FA707_03990 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FA707_03995 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain FA707_03995 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain FA707_04005 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FA707_04015 PF01809 Putative membrane protein insertion efficiency factor FA707_04030 PF00480 ROK family FA707_04050 PF00528 Binding-protein-dependent transport system inner membrane component FA707_04055 PF00528 Binding-protein-dependent transport system inner membrane component FA707_04065 PF00528 Binding-protein-dependent transport system inner membrane component FA707_04070 PF00528 Binding-protein-dependent transport system inner membrane component FA707_04085 PF12833 Helix-turn-helix domain FA707_04095 PF00933 Glycosyl hydrolase family 3 N terminal domain FA707_04095 PF14310 Fibronectin type III-like domain FA707_04095 PF01915 Glycosyl hydrolase family 3 C-terminal domain FA707_04100 PF00232 Glycosyl hydrolase family 1 FA707_04105 PF01546 Peptidase family M20/M25/M40 FA707_04110 PF01112 Asparaginase FA707_04115 PF02836 Glycosyl hydrolases family 2, TIM barrel domain FA707_04115 PF02837 Glycosyl hydrolases family 2, sugar binding domain FA707_04115 PF02929 Beta galactosidase small chain FA707_04115 PF00703 Glycosyl hydrolases family 2 FA707_04120 PF00754 F5/8 type C domain FA707_04120 PF00041 Fibronectin type III domain FA707_04120 PF00963 Cohesin domain FA707_04120 PF02838 Glycosyl hydrolase family 20, domain 2 FA707_04120 PF07555 beta-N-acetylglucosaminidase FA707_04135 PF16347 Domain of unknown function (DUF4976) FA707_04135 PF17390 Bacterial alpha-L-rhamnosidase C-terminal domain FA707_04135 PF00884 Sulfatase FA707_04135 PF17389 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain FA707_04135 PF05592 Bacterial alpha-L-rhamnosidase concanavalin-like domain FA707_04140 PF04055 Radical SAM superfamily FA707_04140 PF13186 Iron-sulfur cluster-binding domain FA707_04150 PF00528 Binding-protein-dependent transport system inner membrane component FA707_04155 PF00528 Binding-protein-dependent transport system inner membrane component FA707_04160 PF12010 Domain of unknown function (DUF3502) FA707_04170 PF06580 Histidine kinase FA707_04170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FA707_04170 PF00672 HAMP domain FA707_04170 PF02743 Cache domain FA707_04175 PF00072 Response regulator receiver domain FA707_04175 PF12833 Helix-turn-helix domain FA707_04185 PF00356 Bacterial regulatory proteins, lacI family FA707_04195 PF01074 Glycosyl hydrolases family 38 N-terminal domain FA707_04195 PF09261 Alpha mannosidase middle domain FA707_04195 PF17677 Glycosyl hydrolases family 38 C-terminal beta sandwich domain FA707_04195 PF18438 Glycosyl hydrolases family 38 C-terminal domain 1 FA707_04195 PF07748 Glycosyl hydrolases family 38 C-terminal domain FA707_04200 PF00480 ROK family FA707_04205 PF00480 ROK family FA707_04225 PF07475 HPr Serine kinase C-terminal domain FA707_04225 PF02603 HPr Serine kinase N terminus FA707_04230 PF01790 Prolipoprotein diacylglyceryl transferase FA707_04235 PF13419 Haloacid dehalogenase-like hydrolase FA707_04240 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus FA707_04240 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus FA707_04245 PF00483 Nucleotidyl transferase FA707_04255 PF00717 Peptidase S24-like FA707_04255 PF01726 LexA DNA binding domain FA707_04260 PF05979 Bacterial protein of unknown function (DUF896) FA707_04265 PF02779 Transketolase, pyrimidine binding domain FA707_04265 PF02780 Transketolase, C-terminal domain FA707_04265 PF00456 Transketolase, thiamine diphosphate binding domain FA707_04270 PF10502 Signal peptidase, peptidase S26 FA707_04275 PF12705 PD-(D/E)XK nuclease superfamily FA707_04280 PF00580 UvrD/REP helicase N-terminal domain FA707_04280 PF12705 PD-(D/E)XK nuclease superfamily FA707_04280 PF13361 UvrD-like helicase C-terminal domain FA707_04285 PF09924 Uncharacterised conserved protein (DUF2156) FA707_04285 PF03706 Lysylphosphatidylglycerol synthase TM region FA707_04295 PF01048 Phosphorylase superfamily FA707_04300 PF01709 Transcriptional regulator FA707_04315 PF04226 Transglycosylase associated protein FA707_04320 PF00881 Nitroreductase family FA707_04325 PF00117 Glutamine amidotransferase class-I FA707_04325 PF06418 CTP synthase N-terminus FA707_04340 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FA707_04340 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FA707_04345 PF16901 C-terminal domain of alpha-glycerophosphate oxidase FA707_04345 PF01266 FAD dependent oxidoreductase FA707_04350 PF00230 Major intrinsic protein FA707_04355 PF02441 Flavoprotein FA707_04360 PF04127 DNA / pantothenate metabolism flavoprotein FA707_04360 PF02441 Flavoprotein FA707_04365 PF12822 ECF transporter, substrate-specific component FA707_04370 PF17922 Tetracyclin repressor-like, C-terminal domain FA707_04370 PF00440 Bacterial regulatory proteins, tetR family FA707_04375 PF01751 Toprim domain FA707_04375 PF00204 DNA gyrase B FA707_04375 PF00986 DNA gyrase B subunit, carboxyl terminus FA707_04375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FA707_04380 PF03989 DNA gyrase C-terminal domain, beta-propeller FA707_04380 PF00521 DNA gyrase/topoisomerase IV, subunit A FA707_04395 PF04297 Putative helix-turn-helix protein, YlxM / p13 like FA707_04400 PF00448 SRP54-type protein, GTPase domain FA707_04400 PF02978 Signal peptide binding domain FA707_04400 PF02881 SRP54-type protein, helical bundle domain FA707_04410 PF00886 Ribosomal protein S16 FA707_04415 PF00583 Acetyltransferase (GNAT) family FA707_04415 PF01047 MarR family FA707_04420 PF04228 Putative neutral zinc metallopeptidase FA707_04440 PF07664 Ferrous iron transport protein B C terminus FA707_04440 PF02421 Ferrous iron transport protein B FA707_04440 PF07670 Nucleoside recognition FA707_04440 PF17910 FeoB cytosolic helical domain FA707_04450 PF00579 tRNA synthetases class I (W and Y) FA707_04450 PF01479 S4 domain FA707_04455 PF00005 ABC transporter FA707_04465 PF01712 Deoxynucleoside kinase FA707_04470 PF13091 PLD-like domain FA707_04475 PF02901 Pyruvate formate lyase-like FA707_04475 PF01228 Glycine radical FA707_04480 PF04055 Radical SAM superfamily FA707_04485 PF10415 Fumarase C C-terminus FA707_04485 PF00206 Lyase FA707_04490 PF02833 DHHA2 domain FA707_04490 PF01368 DHH family FA707_04500 PF07685 CobB/CobQ-like glutamine amidotransferase domain FA707_04505 PF08353 Domain of unknown function (DUF1727) FA707_04505 PF08245 Mur ligase middle domain FA707_04510 PF02386 Cation transport protein FA707_04515 PF18708 MapZ extracellular C-terminal domain 2 FA707_04515 PF18041 MapZ extracellular domain 1 FA707_04520 PF03965 Penicillinase repressor FA707_04525 PF00403 Heavy-metal-associated domain FA707_04530 PF00403 Heavy-metal-associated domain FA707_04535 PF01782 RimM N-terminal domain FA707_04535 PF05239 PRC-barrel domain FA707_04540 PF01746 tRNA (Guanine-1)-methyltransferase FA707_04545 PF01202 Shikimate kinase FA707_04550 PF03009 Glycerophosphoryl diester phosphodiesterase family FA707_04555 PF01245 Ribosomal protein L19 FA707_04565 PF13817 IS66 C-terminal element FA707_04565 PF13007 Transposase C of IS166 homeodomain FA707_04565 PF13005 zinc-finger binding domain of transposase IS66 FA707_04565 PF03050 Transposase IS66 family FA707_04640 PF13936 Helix-turn-helix domain FA707_04645 PF13007 Transposase C of IS166 homeodomain FA707_04645 PF13817 IS66 C-terminal element FA707_04645 PF03050 Transposase IS66 family FA707_04645 PF13005 zinc-finger binding domain of transposase IS66 FA707_04670 PF17853 GGDEF-like domain FA707_04670 PF12833 Helix-turn-helix domain FA707_04675 PF00465 Iron-containing alcohol dehydrogenase FA707_04680 PF03610 PTS system fructose IIA component FA707_04685 PF02733 Dak1 domain FA707_04690 PF02734 DAK2 domain FA707_04700 PF00005 ABC transporter FA707_04715 PF04525 LURP-one-related FA707_04720 PF01546 Peptidase family M20/M25/M40 FA707_04730 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) FA707_04730 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 FA707_04735 PF01883 Iron-sulfur cluster assembly protein FA707_04740 PF00589 Phage integrase family FA707_04740 PF02899 Phage integrase, N-terminal SAM-like domain FA707_04750 PF02384 N-6 DNA Methylase FA707_04750 PF12161 HsdM N-terminal domain FA707_04765 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) FA707_04765 PF12008 Type I restriction and modification enzyme - subunit R C terminal FA707_04765 PF18766 SWI2/SNF2 ATPase FA707_04775 PF11799 impB/mucB/samB family C-terminal domain FA707_04775 PF11798 IMS family HHH motif FA707_04775 PF00817 impB/mucB/samB family FA707_04855 PF00589 Phage integrase family FA707_04870 PF14490 Helix-hairpin-helix containing domain FA707_04870 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain FA707_04870 PF13538 UvrD-like helicase C-terminal domain FA707_04880 PF02075 Crossover junction endodeoxyribonuclease RuvC FA707_04885 PF01883 Iron-sulfur cluster assembly protein FA707_04895 PF01145 SPFH domain / Band 7 family FA707_04895 PF15975 Flotillin FA707_04910 PF00232 Glycosyl hydrolase family 1 FA707_04915 PF13307 Helicase C-terminal domain FA707_04915 PF04851 Type III restriction enzyme, res subunit FA707_04915 PF00929 Exonuclease FA707_04925 PF00155 Aminotransferase class I and II FA707_04930 PF00152 tRNA synthetases class II (D, K and N) FA707_04930 PF01336 OB-fold nucleic acid binding domain FA707_04935 PF00392 Bacterial regulatory proteins, gntR family FA707_04940 PF00005 ABC transporter FA707_04950 PF12704 MacB-like periplasmic core domain FA707_04950 PF02687 FtsX-like permease family FA707_04955 PF00005 ABC transporter FA707_04960 PF03793 PASTA domain FA707_04960 PF00069 Protein kinase domain FA707_04965 PF01807 CHC2 zinc finger FA707_04965 PF08275 DNA primase catalytic core, N-terminal domain FA707_04965 PF10410 DnaB-helicase binding domain of primase FA707_04970 PF04542 Sigma-70 region 2 FA707_04970 PF04545 Sigma-70, region 4 FA707_04970 PF03979 Sigma-70 factor, region 1.1 FA707_04970 PF04539 Sigma-70 region 3 FA707_04970 PF00140 Sigma-70 factor, region 1.2 FA707_04975 PF01487 Type I 3-dehydroquinase FA707_04980 PF04816 tRNA (adenine(22)-N(1))-methyltransferase FA707_04985 PF01784 NIF3 (NGG1p interacting factor 3) FA707_04990 PF07687 Peptidase dimerisation domain FA707_04990 PF01546 Peptidase family M20/M25/M40 FA707_05005 PF00912 Transglycosylase FA707_05005 PF00905 Penicillin binding protein transpeptidase domain FA707_05020 PF01261 Xylose isomerase-like TIM barrel FA707_05025 PF03672 Uncharacterised protein family (UPF0154) FA707_05030 PF00005 ABC transporter FA707_05030 PF00664 ABC transporter transmembrane region FA707_05035 PF00005 ABC transporter FA707_05035 PF00664 ABC transporter transmembrane region FA707_05040 PF01554 MatE FA707_05045 PF07992 Pyridine nucleotide-disulphide oxidoreductase FA707_05050 PF05636 HIGH Nucleotidyl Transferase FA707_05055 PF00005 ABC transporter FA707_05065 PF00886 Ribosomal protein S16 FA707_05085 PF07690 Major Facilitator Superfamily FA707_05095 PF00232 Glycosyl hydrolase family 1 FA707_05100 PF00392 Bacterial regulatory proteins, gntR family FA707_05100 PF07702 UTRA domain FA707_05105 PF00561 alpha/beta hydrolase fold FA707_05110 PF01070 FMN-dependent dehydrogenase FA707_05115 PF00288 GHMP kinases N terminal domain FA707_05115 PF08544 GHMP kinases C terminal FA707_05125 PF00288 GHMP kinases N terminal domain FA707_05125 PF08544 GHMP kinases C terminal FA707_05125 PF10509 Galactokinase galactose-binding signature FA707_05130 PF00368 Hydroxymethylglutaryl-coenzyme A reductase FA707_05135 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal FA707_05135 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal FA707_05140 PF01047 MarR family FA707_05145 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FA707_05150 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FA707_05155 PF01613 Flavin reductase like domain FA707_05165 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FA707_05175 PF01926 50S ribosome-binding GTPase FA707_05175 PF09269 Domain of unknown function (DUF1967) FA707_05175 PF01018 GTP1/OBG FA707_05180 PF12706 Beta-lactamase superfamily domain FA707_05180 PF00753 Metallo-beta-lactamase superfamily FA707_05185 PF00106 short chain dehydrogenase FA707_05195 PF01368 DHH family FA707_05195 PF02272 DHHA1 domain FA707_05195 PF17768 RecJ OB domain FA707_05195 PF10141 Single-strand DNA-specific exonuclease, C terminal domain FA707_05200 PF00156 Phosphoribosyl transferase domain FA707_05210 PF07261 Replication initiation and membrane attachment FA707_05215 PF00633 Helix-hairpin-helix motif FA707_05215 PF10576 Iron-sulfur binding domain of endonuclease III FA707_05215 PF00730 HhH-GPD superfamily base excision DNA repair protein FA707_05220 PF00912 Transglycosylase FA707_05220 PF00905 Penicillin binding protein transpeptidase domain FA707_05225 PF03838 Recombination protein U FA707_05230 PF06908 YspA SLOG family FA707_05235 PF05103 DivIVA protein FA707_05245 PF02926 THUMP domain FA707_05245 PF01170 Putative RNA methylase family UPF0020 FA707_05250 PF02074 Carboxypeptidase Taq (M32) metallopeptidase FA707_05255 PF03606 C4-dicarboxylate anaerobic carrier FA707_05265 PF02645 Uncharacterised protein, DegV family COG1307 FA707_05275 PF13456 Reverse transcriptase-like FA707_05280 PF17255 EbsA-like protein FA707_05285 PF00313 'Cold-shock' DNA-binding domain FA707_05300 PF01252 Signal peptidase (SPase) II FA707_05305 PF00849 RNA pseudouridylate synthase FA707_05305 PF01479 S4 domain FA707_05310 PF00156 Phosphoribosyl transferase domain FA707_05315 PF00860 Permease family FA707_05320 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FA707_05320 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FA707_05325 PF01979 Amidohydrolase family FA707_05330 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain FA707_05330 PF00117 Glutamine amidotransferase class-I FA707_05335 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FA707_05335 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain FA707_05335 PF02142 MGS-like domain FA707_05340 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B FA707_05340 PF00970 Oxidoreductase FAD-binding domain FA707_05345 PF01180 Dihydroorotate dehydrogenase FA707_05350 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family FA707_05355 PF00156 Phosphoribosyl transferase domain FA707_05365 PF12849 PBP superfamily domain FA707_05370 PF00072 Response regulator receiver domain FA707_05370 PF00486 Transcriptional regulatory protein, C terminal FA707_05375 PF18698 Histidine kinase sensor domain FA707_05375 PF00512 His Kinase A (phospho-acceptor) domain FA707_05375 PF00672 HAMP domain FA707_05375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FA707_05380 PF01361 Tautomerase enzyme FA707_05390 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit FA707_05390 PF13375 RnfC Barrel sandwich hybrid domain FA707_05390 PF10531 SLBB domain FA707_05390 PF13237 4Fe-4S dicluster domain FA707_05395 PF09338 Glycine/sarcosine/betaine reductase component B subunits FA707_05415 PF09338 Glycine/sarcosine/betaine reductase component B subunits FA707_05420 PF05544 Proline racemase FA707_05430 PF00586 AIR synthase related protein, N-terminal domain FA707_05430 PF02769 AIR synthase related protein, C-terminal domain FA707_05445 PF09106 Elongation factor SelB, winged helix FA707_05445 PF09107 Elongation factor SelB, winged helix FA707_05445 PF09105 Elongation factor SelB, winged helix FA707_05445 PF00009 Elongation factor Tu GTP binding domain FA707_05445 PF03144 Elongation factor Tu domain 2 FA707_05450 PF00266 Aminotransferase class-V FA707_05455 PF12390 Selenocysteine synthase N terminal FA707_05455 PF03841 L-seryl-tRNA selenium transferase FA707_05460 PF04143 Sulphur transport FA707_05465 PF01206 Sulfurtransferase TusA FA707_05475 PF00589 Phage integrase family FA707_05475 PF13495 Phage integrase, N-terminal SAM-like domain FA707_05490 PF00171 Aldehyde dehydrogenase family FA707_05500 PF01497 Periplasmic binding protein FA707_05505 PF00005 ABC transporter FA707_05510 PF01032 FecCD transport family FA707_05515 PF01032 FecCD transport family FA707_05520 PF01757 Acyltransferase family FA707_05525 PF06855 YozE SAM-like fold FA707_05530 PF01625 Peptide methionine sulfoxide reductase FA707_05540 PF13472 GDSL-like Lipase/Acylhydrolase family FA707_05545 PF02645 Uncharacterised protein, DegV family COG1307 FA707_05550 PF03006 Haemolysin-III related FA707_05555 PF01177 Asp/Glu/Hydantoin racemase FA707_05565 PF08245 Mur ligase middle domain FA707_05565 PF02875 Mur ligase family, glutamate ligase domain FA707_05570 PF02142 MGS-like domain FA707_05575 PF00186 Dihydrofolate reductase FA707_05580 PF00303 Thymidylate synthase FA707_05585 PF00005 ABC transporter FA707_05585 PF12848 ABC transporter FA707_05585 PF16326 ABC transporter C-terminal domain FA707_05600 PF01743 Poly A polymerase head domain FA707_05600 PF12627 Probable RNA and SrmB- binding site of polymerase A FA707_05600 PF13735 tRNA nucleotidyltransferase domain 2 putative FA707_05605 PF03819 MazG nucleotide pyrophosphohydrolase domain FA707_05610 PF08864 UPF0302 domain FA707_05610 PF08858 IDEAL domain FA707_05625 PF00216 Bacterial DNA-binding protein FA707_05630 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal FA707_05630 PF01926 50S ribosome-binding GTPase FA707_05635 PF00575 S1 RNA binding domain FA707_05640 PF02224 Cytidylate kinase FA707_05650 PF00271 Helicase conserved C-terminal domain FA707_05650 PF00270 DEAD/DEAH box helicase FA707_05665 PF12822 ECF transporter, substrate-specific component FA707_05670 PF01479 S4 domain FA707_05670 PF00849 RNA pseudouridylate synthase FA707_05675 PF04079 Segregation and condensation complex subunit ScpB FA707_05680 PF02616 Segregation and condensation protein ScpA FA707_05685 PF02899 Phage integrase, N-terminal SAM-like domain FA707_05685 PF00589 Phage integrase family FA707_05690 PF01475 Ferric uptake regulator family FA707_05700 PF17783 CvfB-like winged helix domain FA707_05700 PF13509 S1 domain FA707_05705 PF00860 Permease family FA707_05710 PF01566 Natural resistance-associated macrophage protein FA707_05745 PF01546 Peptidase family M20/M25/M40 FA707_05750 PF03180 NLPA lipoprotein FA707_05755 PF00528 Binding-protein-dependent transport system inner membrane component FA707_05760 PF09383 NIL domain FA707_05760 PF00005 ABC transporter FA707_05775 PF00113 Enolase, C-terminal TIM barrel domain FA707_05775 PF03952 Enolase, N-terminal domain FA707_05780 PF01676 Metalloenzyme superfamily FA707_05780 PF06415 BPG-independent PGAM N-terminus (iPGM_N) FA707_05785 PF00121 Triosephosphate isomerase FA707_05790 PF00162 Phosphoglycerate kinase FA707_05795 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FA707_05795 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FA707_05800 PF04198 Putative sugar-binding domain FA707_05805 PF00654 Voltage gated chloride channel FA707_05810 PF04552 Sigma-54, DNA binding domain FA707_05810 PF04963 Sigma-54 factor, core binding domain FA707_05810 PF00309 Sigma-54 factor, Activator interacting domain (AID) FA707_05840 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FA707_05840 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FA707_05845 PF01418 Helix-turn-helix domain, rpiR family FA707_05845 PF01380 SIS domain FA707_05850 PF00005 ABC transporter FA707_05860 PF00440 Bacterial regulatory proteins, tetR family FA707_05860 PF17932 Tetracyclin repressor-like, C-terminal domain FA707_05875 PF00356 Bacterial regulatory proteins, lacI family FA707_05880 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment FA707_05880 PF01297 Zinc-uptake complex component A periplasmic FA707_05885 PF00684 DnaJ central domain FA707_05885 PF01556 DnaJ C terminal domain FA707_05885 PF00226 DnaJ domain FA707_05890 PF00012 Hsp70 protein FA707_05895 PF01025 GrpE FA707_05900 PF01628 HrcA protein C terminal domain FA707_05905 PF04055 Radical SAM superfamily FA707_05905 PF06969 HemN C-terminal domain FA707_05910 PF01687 Riboflavin kinase FA707_05910 PF06574 FAD synthetase FA707_05915 PF16198 tRNA pseudouridylate synthase B C-terminal domain FA707_05915 PF01509 TruB family pseudouridylate synthase (N terminal domain) FA707_05920 PF07690 Major Facilitator Superfamily FA707_05925 PF02033 Ribosome-binding factor A FA707_05930 PF00009 Elongation factor Tu GTP binding domain FA707_05930 PF11987 Translation-initiation factor 2 FA707_05930 PF04760 Translation initiation factor IF-2, N-terminal region FA707_05935 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family FA707_05940 PF04296 Protein of unknown function (DUF448) FA707_05945 PF13184 NusA-like KH domain FA707_05945 PF00575 S1 RNA binding domain FA707_05945 PF08529 NusA N-terminal domain FA707_05950 PF02576 RimP N-terminal domain FA707_05950 PF17384 RimP C-terminal SH3 domain FA707_05955 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain FA707_05955 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain FA707_05960 PF01226 Formate/nitrite transporter FA707_05965 PF01812 5-formyltetrahydrofolate cyclo-ligase family FA707_05970 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus FA707_05970 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein FA707_05980 PF04851 Type III restriction enzyme, res subunit FA707_05980 PF00271 Helicase conserved C-terminal domain FA707_05985 PF12146 Serine aminopeptidase, S33 FA707_05995 PF09186 Domain of unknown function (DUF1949) FA707_05995 PF01205 Uncharacterized protein family UPF0029 FA707_06000 PF00392 Bacterial regulatory proteins, gntR family FA707_06000 PF07702 UTRA domain FA707_06010 PF00817 impB/mucB/samB family FA707_06010 PF11799 impB/mucB/samB family C-terminal domain FA707_06010 PF11798 IMS family HHH motif FA707_06025 PF00924 Mechanosensitive ion channel FA707_06030 PF01268 Formate--tetrahydrofolate ligase FA707_06035 PF04961 Formiminotransferase-cyclodeaminase FA707_06040 PF02843 Phosphoribosylglycinamide synthetase, C domain FA707_06040 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain FA707_06040 PF02844 Phosphoribosylglycinamide synthetase, N domain FA707_06045 PF02142 MGS-like domain FA707_06045 PF01808 AICARFT/IMPCHase bienzyme FA707_06050 PF00551 Formyl transferase FA707_06055 PF02769 AIR synthase related protein, C-terminal domain FA707_06055 PF00586 AIR synthase related protein, N-terminal domain FA707_06060 PF13537 Glutamine amidotransferase domain FA707_06060 PF00156 Phosphoribosyl transferase domain FA707_06065 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain FA707_06065 PF02769 AIR synthase related protein, C-terminal domain FA707_06065 PF00586 AIR synthase related protein, N-terminal domain FA707_06075 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase FA707_06080 PF01259 SAICAR synthetase FA707_06085 PF10397 Adenylosuccinate lyase C-terminus FA707_06085 PF00206 Lyase FA707_06095 PF00731 AIR carboxylase FA707_06100 PF01895 PhoU domain FA707_06105 PF00005 ABC transporter FA707_06110 PF00005 ABC transporter FA707_06115 PF00528 Binding-protein-dependent transport system inner membrane component FA707_06120 PF00528 Binding-protein-dependent transport system inner membrane component FA707_06125 PF12849 PBP superfamily domain FA707_06130 PF18075 FtsX extracellular domain FA707_06130 PF02687 FtsX-like permease family FA707_06135 PF00005 ABC transporter FA707_06145 PF02810 SEC-C motif FA707_06145 PF07517 SecA DEAD-like domain FA707_06145 PF01043 SecA preprotein cross-linking domain FA707_06145 PF07516 SecA Wing and Scaffold domain FA707_06150 PF00679 Elongation factor G C-terminus FA707_06150 PF00009 Elongation factor Tu GTP binding domain FA707_06150 PF03144 Elongation factor Tu domain 2 FA707_06150 PF06421 GTP-binding protein LepA C-terminus FA707_06155 PF00004 ATPase family associated with various cellular activities (AAA) FA707_06155 PF10431 C-terminal, D2-small domain, of ClpB protein FA707_06155 PF02861 Clp amino terminal domain, pathogenicity island component FA707_06155 PF17871 AAA lid domain FA707_06155 PF07724 AAA domain (Cdc48 subfamily) FA707_06170 PF02092 Glycyl-tRNA synthetase beta subunit FA707_06170 PF05746 DALR anticodon binding domain FA707_06175 PF02091 Glycyl-tRNA synthetase alpha subunit FA707_06180 PF11967 Recombination protein O N terminal FA707_06180 PF02565 Recombination protein O C terminal FA707_06185 PF07650 KH domain FA707_06185 PF01926 50S ribosome-binding GTPase FA707_06190 PF01219 Prokaryotic diacylglycerol kinase FA707_06195 PF02130 Uncharacterized protein family UPF0054 FA707_06200 PF07698 7TM receptor with intracellular HD hydrolase FA707_06200 PF07697 7TM-HD extracellular FA707_06200 PF01966 HD domain FA707_06205 PF02562 PhoH-like protein FA707_06210 PF04055 Radical SAM superfamily FA707_06215 PF00999 Sodium/hydrogen exchanger family FA707_06225 PF00108 Thiolase, N-terminal domain FA707_06225 PF02803 Thiolase, C-terminal domain FA707_06240 PF17854 FtsK alpha domain FA707_06240 PF09397 Ftsk gamma domain FA707_06240 PF01580 FtsK/SpoIIIE family FA707_06250 PF01751 Toprim domain FA707_06250 PF01131 DNA topoisomerase FA707_06260 PF03180 NLPA lipoprotein FA707_06265 PF00528 Binding-protein-dependent transport system inner membrane component FA707_06270 PF09383 NIL domain FA707_06270 PF00005 ABC transporter FA707_06275 PF01597 Glycine cleavage H-protein FA707_06280 PF03960 ArsC family FA707_06300 PF01554 MatE FA707_06305 PF01042 Endoribonuclease L-PSP FA707_06310 PF00923 Transaldolase/Fructose-6-phosphate aldolase FA707_06315 PF00248 Aldo/keto reductase family FA707_06320 PF03553 Na+/H+ antiporter family FA707_06325 PF03590 Aspartate-ammonia ligase FA707_06330 PF00375 Sodium:dicarboxylate symporter family FA707_06340 PF13732 Domain of unknown function (DUF4162) FA707_06340 PF00005 ABC transporter FA707_06355 PF00665 Integrase core domain FA707_06365 PF04226 Transglycosylase associated protein FA707_06375 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FA707_06375 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg FA707_06375 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase FA707_06375 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II FA707_06375 PF10371 Domain of unknown function FA707_06375 PF12838 4Fe-4S dicluster domain FA707_06390 PF00232 Glycosyl hydrolase family 1 FA707_06395 PF00232 Glycosyl hydrolase family 1 FA707_06400 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit FA707_06405 PF02378 Phosphotransferase system, EIIC FA707_06405 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FA707_06415 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FA707_06415 PF00874 PRD domain FA707_06415 PF05043 Mga helix-turn-helix domain FA707_06415 PF08279 HTH domain FA707_06435 PF04851 Type III restriction enzyme, res subunit FA707_06440 PF01555 DNA methylase FA707_06490 PF00589 Phage integrase family FA707_06490 PF14659 Phage integrase, N-terminal SAM-like domain FA707_06495 PF02016 LD-carboxypeptidase N-terminal domain FA707_06495 PF17676 LD-carboxypeptidase C-terminal domain FA707_06500 PF01458 Uncharacterized protein family (UPF0051) FA707_06505 PF01592 NifU-like N terminal domain FA707_06510 PF00266 Aminotransferase class-V FA707_06515 PF01458 Uncharacterized protein family (UPF0051) FA707_06520 PF00005 ABC transporter FA707_06525 PF00005 ABC transporter FA707_06525 PF00664 ABC transporter transmembrane region FA707_06530 PF00005 ABC transporter FA707_06530 PF00664 ABC transporter transmembrane region FA707_06540 PF00155 Aminotransferase class I and II FA707_06545 PF00155 Aminotransferase class I and II FA707_06555 PF00266 Aminotransferase class-V FA707_06560 PF05223 NTF2-like N-terminal transpeptidase domain FA707_06560 PF03717 Penicillin-binding Protein dimerisation domain FA707_06560 PF00905 Penicillin binding protein transpeptidase domain FA707_06565 PF13407 Periplasmic binding protein domain FA707_06570 PF02653 Branched-chain amino acid transport system / permease component FA707_06575 PF00005 ABC transporter FA707_06580 PF05025 RbsD / FucU transport protein family FA707_06585 PF00294 pfkB family carbohydrate kinase FA707_06590 PF00356 Bacterial regulatory proteins, lacI family FA707_06595 PF00857 Isochorismatase family FA707_06600 PF01048 Phosphorylase superfamily FA707_06610 PF00293 NUDIX domain FA707_06620 PF05816 Toxic anion resistance protein (TelA) FA707_06630 PF05525 Branched-chain amino acid transport protein FA707_06635 PF02817 e3 binding domain FA707_06635 PF00364 Biotin-requiring enzyme FA707_06635 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FA707_06640 PF02779 Transketolase, pyrimidine binding domain FA707_06640 PF02780 Transketolase, C-terminal domain FA707_06645 PF00676 Dehydrogenase E1 component FA707_06650 PF07992 Pyridine nucleotide-disulphide oxidoreductase FA707_06650 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FA707_06655 PF00871 Acetokinase family FA707_06660 PF01515 Phosphate acetyl/butaryl transferase FA707_06665 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain FA707_06665 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase FA707_06670 PF10145 Phage-related minor tail protein FA707_06670 PF01551 Peptidase family M23 FA707_06670 PF01464 Transglycosylase SLT domain FA707_06675 PF00874 PRD domain FA707_06675 PF05043 Mga helix-turn-helix domain FA707_06675 PF08280 M protein trans-acting positive regulator (MGA) HTH domain FA707_06680 PF02655 ATP-grasp domain FA707_06680 PF18419 ATP-grasp-like domain FA707_06680 PF04262 Glutamate-cysteine ligase FA707_06710 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FA707_06715 PF00528 Binding-protein-dependent transport system inner membrane component FA707_06720 PF00528 Binding-protein-dependent transport system inner membrane component FA707_06725 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FA707_06725 PF00005 ABC transporter FA707_06730 PF00005 ABC transporter FA707_06730 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FA707_06735 PF00550 Phosphopantetheine attachment site FA707_06740 PF02504 Fatty acid synthesis protein FA707_06745 PF17191 RecG wedge domain FA707_06745 PF00270 DEAD/DEAH box helicase FA707_06745 PF00271 Helicase conserved C-terminal domain FA707_06750 PF02734 DAK2 domain FA707_06750 PF13684 Dihydroxyacetone kinase family FA707_06755 PF03780 Asp23 family, cell envelope-related function FA707_06760 PF00830 Ribosomal L28 family FA707_06765 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain FA707_06765 PF04263 Thiamin pyrophosphokinase, catalytic domain FA707_06770 PF00834 Ribulose-phosphate 3 epimerase family FA707_06775 PF16745 RsgA N-terminal domain FA707_06775 PF03193 RsgA GTPase FA707_06780 PF00069 Protein kinase domain FA707_06780 PF03793 PASTA domain FA707_06790 PF01189 16S rRNA methyltransferase RsmB/F FA707_06790 PF01029 NusB family FA707_06795 PF00551 Formyl transferase FA707_06795 PF02911 Formyl transferase, C-terminal domain FA707_06800 PF01327 Polypeptide deformylase FA707_06805 PF00271 Helicase conserved C-terminal domain FA707_06805 PF04851 Type III restriction enzyme, res subunit FA707_06805 PF18074 Primosomal protein N C-terminal domain FA707_06805 PF18319 PriA DNA helicase Cys-rich region (CRR) domain FA707_06805 PF17764 3′ DNA-binding domain (3′BD) FA707_06810 PF01192 RNA polymerase Rpb6 FA707_06815 PF00625 Guanylate kinase FA707_06820 PF03755 YicC-like family, N-terminal region FA707_06820 PF08340 Domain of unknown function (DUF1732) FA707_06825 PF02229 Transcriptional Coactivator p15 (PC4) FA707_06840 PF01648 4'-phosphopantetheinyl transferase superfamily FA707_06850 PF00072 Response regulator receiver domain FA707_06850 PF04397 LytTr DNA-binding domain FA707_06860 PF00989 PAS fold FA707_06860 PF17203 Single cache domain 3 FA707_06860 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain FA707_06860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FA707_06870 PF00005 ABC transporter FA707_06880 PF00005 ABC transporter FA707_06895 PF00271 Helicase conserved C-terminal domain FA707_06895 PF00270 DEAD/DEAH box helicase FA707_06900 PF08245 Mur ligase middle domain FA707_06900 PF02875 Mur ligase family, glutamate ligase domain FA707_06900 PF01225 Mur ligase family, catalytic domain FA707_06905 PF01820 D-ala D-ala ligase N-terminus FA707_06905 PF07478 D-ala D-ala ligase C-terminus FA707_06915 PF04203 Sortase domain FA707_06980 PF00005 ABC transporter FA707_06985 PF02687 FtsX-like permease family FA707_06985 PF12704 MacB-like periplasmic core domain FA707_06990 PF10502 Signal peptidase, peptidase S26 FA707_06995 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase FA707_06995 PF05257 CHAP domain FA707_07015 PF10502 Signal peptidase, peptidase S26 FA707_07020 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase FA707_07020 PF01476 LysM domain FA707_07025 PF01451 Low molecular weight phosphotyrosine protein phosphatase FA707_07030 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 FA707_07035 PF09334 tRNA synthetases class I (M) FA707_07035 PF08264 Anticodon-binding domain of tRNA FA707_07035 PF00133 tRNA synthetases class I (I, L, M and V) FA707_07035 PF13603 Leucyl-tRNA synthetase, Domain 2 FA707_07040 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase FA707_07040 PF01476 LysM domain FA707_07055 PF01569 PAP2 superfamily FA707_07060 PF04055 Radical SAM superfamily FA707_07060 PF16199 Radical_SAM C-terminal domain FA707_07065 PF06962 Putative rRNA methylase FA707_07070 PF07690 Major Facilitator Superfamily FA707_07080 PF00438 S-adenosylmethionine synthetase, N-terminal domain FA707_07080 PF02773 S-adenosylmethionine synthetase, C-terminal domain FA707_07080 PF02772 S-adenosylmethionine synthetase, central domain FA707_07090 PF16320 Ribosomal protein L7/L12 dimerisation domain FA707_07090 PF00542 Ribosomal protein L7/L12 C-terminal domain FA707_07095 PF00466 Ribosomal protein L10 FA707_07100 PF00687 Ribosomal protein L1p/L10e family FA707_07105 PF03946 Ribosomal protein L11, N-terminal domain FA707_07105 PF00298 Ribosomal protein L11, RNA binding domain FA707_07115 PF00467 KOW motif FA707_07115 PF02357 Transcription termination factor nusG FA707_07120 PF00584 SecE/Sec61-gamma subunits of protein translocation complex FA707_07125 PF00471 Ribosomal protein L33 FA707_07135 PF06827 Zinc finger found in FPG and IleRS FA707_07135 PF00133 tRNA synthetases class I (I, L, M and V) FA707_07135 PF08264 Anticodon-binding domain of tRNA FA707_07140 PF05103 DivIVA protein FA707_07145 PF17774 Putative RNA-binding domain in YlmH FA707_07145 PF01479 S4 domain FA707_07155 PF04472 Cell division protein SepF FA707_07160 PF01168 Alanine racemase, N-terminal domain FA707_07165 PF00091 Tubulin/FtsZ family, GTPase domain FA707_07165 PF12327 FtsZ family, C-terminal domain FA707_07170 PF02491 SHS2 domain inserted in FTSA FA707_07170 PF11983 Membrane-attachment and polymerisation-promoting switch FA707_07175 PF03799 Cell division protein FtsQ FA707_07175 PF08478 POTRA domain, FtsQ-type FA707_07180 PF03033 Glycosyltransferase family 28 N-terminal domain FA707_07180 PF04101 Glycosyltransferase family 28 C-terminal domain FA707_07185 PF08245 Mur ligase middle domain FA707_07185 PF02875 Mur ligase family, glutamate ligase domain FA707_07190 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 FA707_07190 PF00953 Glycosyl transferase family 4 FA707_07195 PF00905 Penicillin binding protein transpeptidase domain FA707_07195 PF03793 PASTA domain FA707_07195 PF03717 Penicillin-binding Protein dimerisation domain FA707_07205 PF01795 MraW methylase family FA707_07210 PF02381 MraZ protein, putative antitoxin-like FA707_07250 PF00575 S1 RNA binding domain FA707_07255 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FA707_07260 PF07992 Pyridine nucleotide-disulphide oxidoreductase FA707_07265 PF04608 Phosphatidylglycerophosphatase A FA707_07275 PF13344 Haloacid dehalogenase-like hydrolase FA707_07280 PF06265 Protein of unknown function (DUF1027) FA707_07285 PF02872 5'-nucleotidase, C-terminal domain FA707_07290 PF13350 Tyrosine phosphatase family FA707_07295 PF00210 Ferritin-like domain FA707_07300 PF00085 Thioredoxin FA707_07305 PF00488 MutS domain V FA707_07305 PF01713 Smr domain FA707_07315 PF05164 Cell division protein ZapA FA707_07320 PF11858 Domain of unknown function (DUF3378) FA707_07320 PF01351 Ribonuclease HII FA707_07335 PF06949 Protein of unknown function (DUF1292) FA707_07340 PF03652 Holliday junction resolvase FA707_07345 PF06135 IreB regulatory phosphoprotein FA707_07350 PF01588 Putative tRNA binding domain FA707_07350 PF14794 Domain of unknown function (DUF4479) FA707_07355 PF00582 Universal stress protein family FA707_07360 PF00085 Thioredoxin FA707_07365 PF05343 M42 glutamyl aminopeptidase FA707_07375 PF03180 NLPA lipoprotein FA707_07380 PF00528 Binding-protein-dependent transport system inner membrane component FA707_07385 PF09383 NIL domain FA707_07385 PF00005 ABC transporter FA707_07390 PF00005 ABC transporter FA707_07390 PF00664 ABC transporter transmembrane region FA707_07400 PF02390 Putative methyltransferase FA707_07405 PF01636 Phosphotransferase enzyme family FA707_07410 PF05975 Bacterial ABC transporter protein EcsB FA707_07415 PF00005 ABC transporter FA707_07420 PF01230 HIT domain FA707_07430 PF13145 PPIC-type PPIASE domain FA707_07435 PF01966 HD domain FA707_07440 PF13514 AAA domain FA707_07450 PF06133 Control of competence regulator ComK, YlbF/YmcA FA707_07455 PF00912 Transglycosylase FA707_07455 PF00905 Penicillin binding protein transpeptidase domain FA707_07460 PF01479 S4 domain FA707_07460 PF00849 RNA pseudouridylate synthase FA707_07465 PF03485 Arginyl tRNA synthetase N terminal domain FA707_07465 PF00750 tRNA synthetases class I (R) FA707_07465 PF05746 DALR anticodon binding domain FA707_07470 PF04892 VanZ like family FA707_07485 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FA707_07485 PF01411 tRNA synthetases class II (A) FA707_07485 PF02272 DHHA1 domain FA707_07495 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FA707_07495 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FA707_07495 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FA707_07495 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FA707_07505 PF02457 DisA bacterial checkpoint controller nucleotide-binding FA707_07510 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FA707_07510 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase FA707_07510 PF10371 Domain of unknown function FA707_07510 PF12838 4Fe-4S dicluster domain FA707_07510 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II FA707_07510 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg FA707_07515 PF13460 NAD(P)H-binding FA707_07520 PF10263 SprT-like family FA707_07525 PF00575 S1 RNA binding domain FA707_07525 PF17674 HHH domain FA707_07525 PF09371 Tex-like protein N-terminal domain FA707_07525 PF16921 Tex protein YqgF-like domain FA707_07540 PF03606 C4-dicarboxylate anaerobic carrier FA707_07545 PF01979 Amidohydrolase family FA707_07550 PF00497 Bacterial extracellular solute-binding proteins, family 3 FA707_07555 PF00005 ABC transporter FA707_07560 PF00528 Binding-protein-dependent transport system inner membrane component FA707_07570 PF07690 Major Facilitator Superfamily FA707_07580 PF00005 ABC transporter FA707_07580 PF00664 ABC transporter transmembrane region FA707_07585 PF07992 Pyridine nucleotide-disulphide oxidoreductase FA707_07585 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FA707_07590 PF02817 e3 binding domain FA707_07590 PF00364 Biotin-requiring enzyme FA707_07590 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FA707_07595 PF02779 Transketolase, pyrimidine binding domain FA707_07595 PF02780 Transketolase, C-terminal domain FA707_07600 PF00676 Dehydrogenase E1 component FA707_07605 PF00248 Aldo/keto reductase family FA707_07610 PF07729 FCD domain FA707_07610 PF00392 Bacterial regulatory proteins, gntR family FA707_07615 PF02222 ATP-grasp domain FA707_07620 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase FA707_07620 PF13457 GW (Gly-Tryp) dipeptide domain FA707_07625 PF02557 D-alanyl-D-alanine carboxypeptidase FA707_07635 PF06081 Aromatic acid exporter family member 1 FA707_07635 PF11728 Putative aromatic acid exporter C-terminal domain FA707_07655 PF05066 HB1, ASXL, restriction endonuclease HTH domain FA707_07665 PF03099 Biotin/lipoate A/B protein ligase family FA707_07670 PF01966 HD domain FA707_07680 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FA707_07690 PF13520 Amino acid permease FA707_07700 PF01197 Ribosomal protein L31 FA707_07705 PF07497 Rho termination factor, RNA-binding domain FA707_07705 PF07498 Rho termination factor, N-terminal domain FA707_07705 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FA707_07710 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FA707_07720 PF06335 Protein of unknown function (DUF1054) FA707_07725 PF13673 Acetyltransferase (GNAT) domain FA707_07725 PF00958 GMP synthase C terminal domain FA707_07725 PF00117 Glutamine amidotransferase class-I FA707_07725 PF03352 Methyladenine glycosylase FA707_07725 PF13302 Acetyltransferase (GNAT) domain FA707_07730 PF01938 TRAM domain FA707_07730 PF05958 tRNA (Uracil-5-)-methyltransferase FA707_07735 PF00781 Diacylglycerol kinase catalytic domain FA707_07740 PF02637 GatB domain FA707_07740 PF02934 GatB/GatE catalytic domain FA707_07745 PF01425 Amidase FA707_07750 PF02686 Glu-tRNAGln amidotransferase C subunit FA707_07760 PF03119 NAD-dependent DNA ligase C4 zinc finger domain FA707_07760 PF00533 BRCA1 C Terminus (BRCT) domain FA707_07760 PF01653 NAD-dependent DNA ligase adenylation domain FA707_07760 PF03120 NAD-dependent DNA ligase OB-fold domain FA707_07760 PF12826 Helix-hairpin-helix motif FA707_07765 PF00580 UvrD/REP helicase N-terminal domain FA707_07765 PF13361 UvrD-like helicase C-terminal domain FA707_07775 PF01541 GIY-YIG catalytic domain FA707_07775 PF08459 UvrC Helix-hairpin-helix N-terminal FA707_07775 PF02151 UvrB/uvrC motif FA707_07785 PF02863 Arginine repressor, C-terminal domain FA707_07785 PF01316 Arginine repressor, DNA binding domain FA707_07790 PF03606 C4-dicarboxylate anaerobic carrier FA707_07800 PF00696 Amino acid kinase family FA707_07805 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FA707_07805 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FA707_07815 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FA707_07815 PF03129 Anticodon binding domain FA707_07815 PF04073 Aminoacyl-tRNA editing domain FA707_07820 PF17820 PDZ domain FA707_07820 PF02163 Peptidase family M50 FA707_07830 PF01255 Putative undecaprenyl diphosphate synthase FA707_07870 PF01765 Ribosome recycling factor FA707_07875 PF00696 Amino acid kinase family FA707_07880 PF00889 Elongation factor TS FA707_07885 PF00318 Ribosomal protein S2 FA707_07890 PF05175 Methyltransferase small domain FA707_07905 PF00485 Phosphoribulokinase / Uridine kinase family FA707_07910 PF02540 NAD synthase FA707_07910 PF00958 GMP synthase C terminal domain FA707_07910 PF00117 Glutamine amidotransferase class-I FA707_07955 PF00589 Phage integrase family FA707_07955 PF13495 Phage integrase, N-terminal SAM-like domain FA707_07965 PF17757 UvrB interaction domain FA707_07965 PF02151 UvrB/uvrC motif FA707_07965 PF00271 Helicase conserved C-terminal domain FA707_07965 PF12344 Ultra-violet resistance protein B FA707_07965 PF04851 Type III restriction enzyme, res subunit FA707_07980 PF02976 DNA mismatch repair enzyme MutH FA707_07985 PF00145 C-5 cytosine-specific DNA methylase FA707_07990 PF00239 Resolvase, N terminal domain FA707_07990 PF02796 Helix-turn-helix domain of resolvase FA707_08005 PF00005 ABC transporter FA707_08010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FA707_08015 PF00486 Transcriptional regulatory protein, C terminal FA707_08015 PF00072 Response regulator receiver domain FA707_08020 PF12833 Helix-turn-helix domain FA707_08020 PF06445 GyrI-like small molecule binding domain FA707_08025 PF17760 UvrA interaction domain FA707_08025 PF17755 UvrA DNA-binding domain FA707_08025 PF00005 ABC transporter FA707_08030 PF00145 C-5 cytosine-specific DNA methylase FA707_08035 PF13936 Helix-turn-helix domain FA707_08045 PF04607 Region found in RelA / SpoT proteins FA707_08045 PF02824 TGS domain FA707_08045 PF13291 ACT domain FA707_08050 PF00881 Nitroreductase family FA707_08085 PF00874 PRD domain FA707_08085 PF03123 CAT RNA binding domain FA707_08090 PF02645 Uncharacterised protein, DegV family COG1307 FA707_08095 PF07992 Pyridine nucleotide-disulphide oxidoreductase FA707_08105 PF07690 Major Facilitator Superfamily FA707_08110 PF07687 Peptidase dimerisation domain FA707_08110 PF01546 Peptidase family M20/M25/M40 FA707_08120 PF14542 GCN5-related N-acetyl-transferase FA707_08130 PF01791 DeoC/LacD family aldolase FA707_08135 PF13407 Periplasmic binding protein domain FA707_08140 PF02653 Branched-chain amino acid transport system / permease component FA707_08145 PF02653 Branched-chain amino acid transport system / permease component FA707_08150 PF00005 ABC transporter FA707_08155 PF00325 Bacterial regulatory proteins, crp family FA707_08155 PF04198 Putative sugar-binding domain FA707_08160 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FA707_08160 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FA707_08165 PF07883 Cupin domain FA707_08170 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain FA707_08170 PF01138 3' exoribonuclease family, domain 1 FA707_08170 PF03725 3' exoribonuclease family, domain 2 FA707_08170 PF00575 S1 RNA binding domain FA707_08170 PF00013 KH domain FA707_08175 PF00312 Ribosomal protein S15 FA707_08185 PF01327 Polypeptide deformylase FA707_08195 PF04172 LrgB-like family FA707_08200 PF03788 LrgA family FA707_08205 PF01479 S4 domain FA707_08205 PF00163 Ribosomal protein S4/S9 N-terminal domain FA707_08215 PF01979 Amidohydrolase family FA707_08225 PF00155 Aminotransferase class I and II FA707_08235 PF01325 Iron dependent repressor, N-terminal DNA binding domain FA707_08235 PF02742 Iron dependent repressor, metal binding and dimerisation domain FA707_08235 PF18357 Diphteria toxin repressor SH3 domain FA707_08240 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain FA707_08240 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain FA707_08245 PF03703 Bacterial PH domain FA707_08250 PF03703 Bacterial PH domain FA707_08255 PF01546 Peptidase family M20/M25/M40 FA707_08260 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 FA707_08260 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) FA707_08265 PF02938 GAD domain FA707_08265 PF01336 OB-fold nucleic acid binding domain FA707_08265 PF00152 tRNA synthetases class II (D, K and N) FA707_08270 PF03129 Anticodon binding domain FA707_08270 PF13393 Histidyl-tRNA synthetase FA707_08275 PF08239 Bacterial SH3 domain FA707_08275 PF01520 N-acetylmuramoyl-L-alanine amidase FA707_08280 PF02580 D-Tyr-tRNA(Tyr) deacylase FA707_08285 PF02824 TGS domain FA707_08285 PF04607 Region found in RelA / SpoT proteins FA707_08285 PF13291 ACT domain FA707_08290 PF01501 Glycosyl transferase family 8 FA707_08290 PF08437 Glycosyl transferase family 8 C-terminal FA707_08295 PF04452 RNA methyltransferase FA707_08315 PF12002 MgsA AAA+ ATPase C terminal FA707_08315 PF05496 Holliday junction DNA helicase RuvB P-loop domain FA707_08315 PF16193 AAA C-terminal domain FA707_08330 PF00582 Universal stress protein family FA707_08335 PF00557 Metallopeptidase family M24 FA707_08335 PF01321 Creatinase/Prolidase N-terminal domain FA707_08340 PF13520 Amino acid permease FA707_08345 PF01381 Helix-turn-helix FA707_08360 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase FA707_08360 PF01476 LysM domain FA707_08365 PF00753 Metallo-beta-lactamase superfamily FA707_08370 PF07739 TipAS antibiotic-recognition domain FA707_08370 PF13411 MerR HTH family regulatory protein FA707_08375 PF03618 Kinase/pyrophosphorylase FA707_08385 PF01386 Ribosomal L25p family FA707_08385 PF14693 Ribosomal protein TL5, C-terminal domain FA707_08390 PF00005 ABC transporter FA707_08390 PF00664 ABC transporter transmembrane region FA707_08395 PF00005 ABC transporter FA707_08395 PF00664 ABC transporter transmembrane region FA707_08410 PF00107 Zinc-binding dehydrogenase FA707_08410 PF08240 Alcohol dehydrogenase GroES-like domain FA707_08415 PF00916 Sulfate permease family FA707_08415 PF01740 STAS domain FA707_08420 PF04167 Protein of unknown function (DUF402) FA707_08430 PF00730 HhH-GPD superfamily base excision DNA repair protein FA707_08430 PF14815 NUDIX domain FA707_08435 PF02631 RecX family FA707_08470 PF02836 Glycosyl hydrolases family 2, TIM barrel domain FA707_08470 PF02837 Glycosyl hydrolases family 2, sugar binding domain FA707_08470 PF16355 Domain of unknown function (DUF4982) FA707_08470 PF00703 Glycosyl hydrolases family 2 FA707_08480 PF00528 Binding-protein-dependent transport system inner membrane component FA707_08485 PF00528 Binding-protein-dependent transport system inner membrane component FA707_08505 PF03816 Cell envelope-related transcriptional attenuator domain FA707_08510 PF00483 Nucleotidyl transferase FA707_08515 PF03023 Lipid II flippase MurJ FA707_08520 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain FA707_08520 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain FA707_08520 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FA707_08525 PF01370 NAD dependent epimerase/dehydratase family FA707_08530 PF04321 RmlD substrate binding domain FA707_08535 PF16363 GDP-mannose 4,6 dehydratase FA707_08540 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase FA707_08545 PF00483 Nucleotidyl transferase FA707_08560 PF00535 Glycosyl transferase family 2 FA707_08565 PF13439 Glycosyltransferase Family 4 FA707_08565 PF00534 Glycosyl transferases group 1 FA707_08570 PF00132 Bacterial transferase hexapeptide (six repeats) FA707_08570 PF14602 Hexapeptide repeat of succinyl-transferase FA707_08570 PF12464 Maltose acetyltransferase FA707_08575 PF00535 Glycosyl transferase family 2 FA707_08585 PF02397 Bacterial sugar transferase FA707_08590 PF02719 Polysaccharide biosynthesis protein FA707_08600 PF13614 AAA domain FA707_08605 PF02706 Chain length determinant protein FA707_08605 PF13807 G-rich domain on putative tyrosine kinase FA707_08630 PF00877 NlpC/P60 family FA707_08640 PF12354 Bacterial adhesion/invasion protein N terminal FA707_08640 PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) FA707_08640 PF08191 LRR adjacent FA707_08640 PF12799 Leucine Rich repeats (2 copies) FA707_08660 PF00535 Glycosyl transferase family 2 FA707_08665 PF04138 GtrA-like protein FA707_08680 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase FA707_08680 PF00535 Glycosyl transferase family 2 FA707_08685 PF13457 GW (Gly-Tryp) dipeptide domain FA707_08685 PF01510 N-acetylmuramoyl-L-alanine amidase FA707_08690 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase FA707_08690 PF01476 LysM domain FA707_08700 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase FA707_08705 PF01370 NAD dependent epimerase/dehydratase family FA707_08710 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase FA707_08715 PF01467 Cytidylyltransferase-like FA707_08720 PF01467 Cytidylyltransferase-like FA707_08730 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase FA707_08735 PF01061 ABC-2 type transporter FA707_08740 PF03808 Glycosyl transferase WecB/TagA/CpsF family FA707_08745 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase FA707_08750 PF00005 ABC transporter FA707_08755 PF03816 Cell envelope-related transcriptional attenuator domain FA707_08760 PF00953 Glycosyl transferase family 4 FA707_08765 PF03631 Virulence factor BrkB FA707_08770 PF00557 Metallopeptidase family M24 FA707_08775 PF00258 Flavodoxin FA707_08785 PF02073 Thermophilic metalloprotease (M29) FA707_08815 PF02378 Phosphotransferase system, EIIC FA707_08820 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit FA707_08825 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FA707_08835 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit FA707_08840 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FA707_08860 PF02378 Phosphotransferase system, EIIC FA707_08865 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit FA707_08870 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FA707_08875 PF00874 PRD domain FA707_08875 PF03610 PTS system fructose IIA component FA707_08875 PF00158 Sigma-54 interaction domain FA707_08880 PF00271 Helicase conserved C-terminal domain FA707_08880 PF00270 DEAD/DEAH box helicase FA707_08885 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FA707_08895 PF00005 ABC transporter FA707_08900 PF00528 Binding-protein-dependent transport system inner membrane component FA707_08905 PF00664 ABC transporter transmembrane region FA707_08905 PF00005 ABC transporter FA707_08910 PF00664 ABC transporter transmembrane region FA707_08910 PF00005 ABC transporter FA707_08915 PF07288 Protein of unknown function (DUF1447) FA707_08920 PF17770 Ribonuclease J C-terminal domain FA707_08920 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain FA707_08920 PF00753 Metallo-beta-lactamase superfamily FA707_08930 PF06838 Methionine gamma-lyase FA707_08935 PF13167 GTP-binding GTPase N-terminal FA707_08935 PF16360 GTP-binding GTPase Middle Region FA707_08935 PF01926 50S ribosome-binding GTPase FA707_08945 PF03009 Glycerophosphoryl diester phosphodiesterase family FA707_08955 PF00313 'Cold-shock' DNA-binding domain FA707_08960 PF04002 RadC-like JAB domain FA707_08970 PF13419 Haloacid dehalogenase-like hydrolase FA707_08975 PF02875 Mur ligase family, glutamate ligase domain FA707_08975 PF08245 Mur ligase middle domain FA707_08980 PF08264 Anticodon-binding domain of tRNA FA707_08980 PF00133 tRNA synthetases class I (I, L, M and V) FA707_08980 PF10458 Valyl tRNA synthetase tRNA binding arm FA707_08985 PF08534 Redoxin FA707_08995 PF02629 CoA binding domain FA707_08995 PF06971 Putative DNA-binding protein N-terminus FA707_09000 PF02926 THUMP domain FA707_09000 PF02568 Thiamine biosynthesis protein (ThiI) FA707_09005 PF00266 Aminotransferase class-V FA707_09010 PF06160 Septation ring formation regulator, EzrA FA707_09020 PF01904 Protein of unknown function DUF72 FA707_09025 PF00710 Asparaginase, N-terminal FA707_09025 PF17763 Glutaminase/Asparaginase C-terminal domain FA707_09030 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FA707_09035 PF06257 Biofilm formation stimulator VEG FA707_09040 PF08281 Sigma-70, region 4 FA707_09040 PF04542 Sigma-70 region 2 FA707_09190 PF01475 Ferric uptake regulator family FA707_09200 PF00206 Lyase FA707_09200 PF10397 Adenylosuccinate lyase C-terminus FA707_09205 PF00929 Exonuclease FA707_09205 PF11490 DNA polymerase III polC-type N-terminus II FA707_09205 PF14579 Helix-hairpin-helix motif FA707_09205 PF02811 PHP domain FA707_09205 PF14480 DNA polymerase III polC-type N-terminus I FA707_09205 PF07733 Bacterial DNA polymerase III alpha NTPase domain FA707_09205 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FA707_09210 PF02632 BioY family FA707_09245 PF00589 Phage integrase family FA707_09245 PF14659 Phage integrase, N-terminal SAM-like domain FA707_09325 PF01336 OB-fold nucleic acid binding domain FA707_09325 PF00152 tRNA synthetases class II (D, K and N) FA707_09330 PF01207 Dihydrouridine synthase (Dus) FA707_09335 PF01430 Hsp33 protein FA707_09340 PF00004 ATPase family associated with various cellular activities (AAA) FA707_09340 PF17862 AAA+ lid domain FA707_09340 PF01434 Peptidase family M41 FA707_09340 PF06480 FtsH Extracellular FA707_09345 PF00156 Phosphoribosyl transferase domain FA707_09350 PF11734 TilS substrate C-terminal domain FA707_09350 PF01171 PP-loop family FA707_09355 PF00575 S1 RNA binding domain FA707_09365 PF01479 S4 domain FA707_09370 PF14667 Polysaccharide biosynthesis C-terminal domain FA707_09370 PF01943 Polysaccharide biosynthesis protein FA707_09375 PF03461 TRCF domain FA707_09375 PF00271 Helicase conserved C-terminal domain FA707_09375 PF00270 DEAD/DEAH box helicase FA707_09375 PF02559 CarD-like/TRCF domain FA707_09375 PF17757 UvrB interaction domain FA707_09380 PF01195 Peptidyl-tRNA hydrolase FA707_09395 PF04298 Putative neutral zinc metallopeptidase FA707_09400 PF03831 PhnA domain FA707_09400 PF08274 PhnA Zinc-Ribbon FA707_09410 PF00990 Diguanylate cyclase, GGDEF domain FA707_09410 PF07694 5TMR of 5TMR-LYT FA707_09415 PF00884 Sulfatase FA707_09420 PF02540 NAD synthase FA707_09425 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain FA707_09425 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain FA707_09425 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family FA707_09430 PF00588 SpoU rRNA Methylase family FA707_09440 PF03932 CutC family FA707_09445 PF00571 CBS domain FA707_09445 PF03448 MgtE intracellular N domain FA707_09445 PF01769 Divalent cation transporter FA707_09450 PF00849 RNA pseudouridylate synthase FA707_09455 PF01513 ATP-NAD kinase FA707_09460 PF04607 Region found in RelA / SpoT proteins FA707_09465 PF01928 CYTH domain FA707_09470 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FA707_09475 PF00528 Binding-protein-dependent transport system inner membrane component FA707_09480 PF00528 Binding-protein-dependent transport system inner membrane component FA707_09480 PF12911 N-terminal TM domain of oligopeptide transport permease C FA707_09485 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FA707_09485 PF00005 ABC transporter FA707_09490 PF00005 ABC transporter FA707_09490 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FA707_09500 PF17936 Bacterial Ig domain FA707_09500 PF00149 Calcineurin-like phosphoesterase FA707_09500 PF02872 5'-nucleotidase, C-terminal domain FA707_09505 PF08439 Oligopeptidase F FA707_09505 PF01432 Peptidase family M3 FA707_09515 PF00860 Permease family FA707_09520 PF03601 Conserved hypothetical protein 698 FA707_09530 PF00877 NlpC/P60 family FA707_09540 PF04085 rod shape-determining protein MreC FA707_09545 PF00465 Iron-containing alcohol dehydrogenase FA707_09545 PF00171 Aldehyde dehydrogenase family FA707_09550 PF02699 Preprotein translocase subunit FA707_09555 PF01702 Queuine tRNA-ribosyltransferase FA707_09560 PF02547 Queuosine biosynthesis protein FA707_09565 PF05491 RuvB C-terminal winged helix domain FA707_09565 PF17864 RuvB AAA lid domain FA707_09565 PF05496 Holliday junction DNA helicase RuvB P-loop domain FA707_09570 PF07499 RuvA, C-terminal domain FA707_09570 PF01330 RuvA N terminal domain FA707_09575 PF00704 Glycosyl hydrolases family 18 FA707_09590 PF01470 Pyroglutamyl peptidase FA707_09615 PF12833 Helix-turn-helix domain FA707_09630 PF01791 DeoC/LacD family aldolase FA707_09635 PF01906 Putative heavy-metal-binding FA707_09640 PF00999 Sodium/hydrogen exchanger family FA707_09645 PF00871 Acetokinase family FA707_09650 PF02384 N-6 DNA Methylase FA707_09655 PF12822 ECF transporter, substrate-specific component FA707_09660 PF00854 POT family FA707_09680 PF00005 ABC transporter FA707_09680 PF13732 Domain of unknown function (DUF4162) FA707_09685 PF00232 Glycosyl hydrolase family 1 FA707_09690 PF00367 phosphotransferase system, EIIB FA707_09690 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 FA707_09690 PF02378 Phosphotransferase system, EIIC FA707_09695 PF00874 PRD domain FA707_09695 PF03123 CAT RNA binding domain FA707_09715 PF01244 Membrane dipeptidase (Peptidase family M19) FA707_09720 PF07690 Major Facilitator Superfamily FA707_09725 PF01047 MarR family FA707_09745 PF03741 Integral membrane protein TerC family FA707_09770 PF00860 Permease family FA707_09780 PF09711 CRISPR-associated protein (Cas_Csn2) FA707_09785 PF09827 CRISPR associated protein Cas2 FA707_09790 PF01867 CRISPR associated protein Cas1 FA707_09795 PF16595 PAM-interacting domain of CRISPR-associated endonuclease Cas9 FA707_09795 PF13395 HNH endonuclease FA707_09795 PF16593 Bridge helix of CRISPR-associated endonuclease Cas9 FA707_09795 PF16592 REC lobe of CRISPR-associated endonuclease Cas9 FA707_09800 PF17770 Ribonuclease J C-terminal domain FA707_09800 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain FA707_09800 PF00753 Metallo-beta-lactamase superfamily FA707_09820 PF00005 ABC transporter FA707_09820 PF00664 ABC transporter transmembrane region FA707_09825 PF02350 UDP-N-acetylglucosamine 2-epimerase FA707_09830 PF00176 SNF2 family N-terminal domain FA707_09830 PF00271 Helicase conserved C-terminal domain FA707_09830 PF12419 SNF2 Helicase protein FA707_09835 PF13476 AAA domain FA707_09840 PF12320 Type 5 capsule protein repressor C-terminal domain FA707_09840 PF00149 Calcineurin-like phosphoesterase FA707_09850 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FA707_09860 PF01594 AI-2E family transporter FA707_09865 PF00005 ABC transporter FA707_09865 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FA707_09870 PF00005 ABC transporter FA707_09870 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FA707_09875 PF00528 Binding-protein-dependent transport system inner membrane component FA707_09875 PF12911 N-terminal TM domain of oligopeptide transport permease C FA707_09880 PF00528 Binding-protein-dependent transport system inner membrane component FA707_09890 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FA707_09895 PF00860 Permease family FA707_09900 PF01979 Amidohydrolase family FA707_09910 PF02629 CoA binding domain FA707_09910 PF06971 Putative DNA-binding protein N-terminus FA707_09915 PF12848 ABC transporter FA707_09915 PF16326 ABC transporter C-terminal domain FA707_09915 PF00005 ABC transporter FA707_09925 PF01368 DHH family FA707_09925 PF02272 DHHA1 domain FA707_09930 PF00571 CBS domain FA707_09930 PF03061 Thioesterase superfamily FA707_09930 PF07085 DRTGG domain FA707_09930 PF00392 Bacterial regulatory proteins, gntR family FA707_09935 PF03313 Serine dehydratase alpha chain FA707_09940 PF03315 Serine dehydratase beta chain FA707_09940 PF01842 ACT domain FA707_09950 PF02590 Predicted SPOUT methyltransferase FA707_09955 PF13180 PDZ domain FA707_09960 PF00999 Sodium/hydrogen exchanger family FA707_09970 PF01553 Acyltransferase FA707_09975 PF05175 Methyltransferase small domain FA707_09980 PF01541 GIY-YIG catalytic domain FA707_09985 PF00701 Dihydrodipicolinate synthetase family FA707_09990 PF01418 Helix-turn-helix domain, rpiR family FA707_09990 PF01380 SIS domain FA707_09995 PF00480 ROK family FA707_10000 PF04074 YhcH/YjgK/YiaL FA707_10005 PF01547 Bacterial extracellular solute-binding protein FA707_10010 PF00528 Binding-protein-dependent transport system inner membrane component FA707_10015 PF00528 Binding-protein-dependent transport system inner membrane component FA707_10020 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase FA707_10030 PF04972 BON domain FA707_10030 PF01476 LysM domain FA707_10035 PF01381 Helix-turn-helix FA707_10040 PF00485 Phosphoribulokinase / Uridine kinase family FA707_10045 PF08331 Domain of unknown function (DUF1730) FA707_10055 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FA707_10055 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FA707_10065 PF00690 Cation transporter/ATPase, N-terminus FA707_10065 PF00689 Cation transporting ATPase, C-terminus FA707_10075 PF05991 YacP-like NYN domain FA707_10080 PF08032 RNA 2'-O ribose methyltransferase substrate binding FA707_10080 PF00588 SpoU rRNA Methylase family FA707_10085 PF00636 Ribonuclease III domain FA707_10090 PF01406 tRNA synthetases class I (C) catalytic domain FA707_10090 PF09190 DALR domain FA707_10095 PF00132 Bacterial transferase hexapeptide (six repeats) FA707_10095 PF06426 Serine acetyltransferase, N-terminal FA707_10100 PF00749 tRNA synthetases class I (E and Q), catalytic domain FA707_10110 PF18073 Rubredoxin metal binding domain FA707_10115 PF00692 dUTPase FA707_10120 PF02567 Phenazine biosynthesis-like protein FA707_10135 PF02583 Metal-sensitive transcriptional repressor FA707_10140 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FA707_10140 PF07992 Pyridine nucleotide-disulphide oxidoreductase FA707_10145 PF00581 Rhodanese-like domain FA707_10150 PF01479 S4 domain FA707_10150 PF00849 RNA pseudouridylate synthase FA707_10155 PF14667 Polysaccharide biosynthesis C-terminal domain FA707_10155 PF01943 Polysaccharide biosynthesis protein FA707_10160 PF05343 M42 glutamyl aminopeptidase FA707_10170 PF13302 Acetyltransferase (GNAT) domain FA707_10175 PF00753 Metallo-beta-lactamase superfamily FA707_10190 PF00672 HAMP domain FA707_10190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FA707_10190 PF00512 His Kinase A (phospho-acceptor) domain FA707_10190 PF13426 PAS domain FA707_10195 PF00486 Transcriptional regulatory protein, C terminal FA707_10195 PF00072 Response regulator receiver domain FA707_10200 PF13538 UvrD-like helicase C-terminal domain FA707_10205 PF17773 UPF0176 acylphosphatase like domain FA707_10205 PF12368 Rhodanase C-terminal FA707_10205 PF00581 Rhodanese-like domain FA707_10220 PF07501 G5 domain FA707_10220 PF03990 G5-linked-Ubiquitin-like domain FA707_10220 PF06725 3D domain FA707_10230 PF02308 MgtC family FA707_10300 PF00486 Transcriptional regulatory protein, C terminal FA707_10300 PF00072 Response regulator receiver domain FA707_10305 PF00512 His Kinase A (phospho-acceptor) domain FA707_10305 PF16736 Single Cache-like FA707_10305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FA707_10305 PF00989 PAS fold FA707_10310 PF00768 D-alanyl-D-alanine carboxypeptidase FA707_10310 PF07943 Penicillin-binding protein 5, C-terminal domain FA707_10315 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FA707_10315 PF02403 Seryl-tRNA synthetase N-terminal domain FA707_10320 PF01262 Alanine dehydrogenase/PNT, C-terminal domain FA707_10320 PF05222 Alanine dehydrogenase/PNT, N-terminal domain FA707_10325 PF00571 CBS domain FA707_10325 PF00478 IMP dehydrogenase / GMP reductase domain FA707_10340 PF06071 Protein of unknown function (DUF933) FA707_10340 PF01926 50S ribosome-binding GTPase FA707_10345 PF06107 Bacterial protein of unknown function (DUF951) FA707_10350 PF02195 ParB-like nuclease domain FA707_10350 PF17762 HTH domain found in ParB protein FA707_10355 PF13614 AAA domain FA707_10360 PF02527 rRNA small subunit methyltransferase G FA707_10375 PF09335 SNARE associated Golgi protein FA707_10400 PF13932 GidA associated domain FA707_10400 PF01134 Glucose inhibited division protein A FA707_10405 PF01926 50S ribosome-binding GTPase FA707_10405 PF12631 MnmE helical domain FA707_10405 PF10396 GTP-binding protein TrmE N-terminus FA707_10415 PF02096 60Kd inner membrane protein FA707_10420 PF00825 Ribonuclease P FA707_10425 PF00468 Ribosomal protein L34