locus-tag class description HYG85_00020 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus HYG85_00020 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus HYG85_00025 PF02660 Glycerol-3-phosphate acyltransferase HYG85_00030 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal HYG85_00030 PF01926 50S ribosome-binding GTPase HYG85_00040 PF02578 Multi-copper polyphenol oxidoreductase laccase HYG85_00045 PF02021 Uncharacterised protein family UPF0102 HYG85_00050 PF01312 FlhB HrpN YscU SpaS Family HYG85_00060 PF01351 Ribonuclease HII HYG85_00070 PF01926 50S ribosome-binding GTPase HYG85_00075 PF10502 Signal peptidase, peptidase S26 HYG85_00080 PF01245 Ribosomal protein L19 HYG85_00085 PF01746 tRNA (Guanine-1)-methyltransferase HYG85_00090 PF05239 PRC-barrel domain HYG85_00090 PF01782 RimM N-terminal domain HYG85_00100 PF00886 Ribosomal protein S16 HYG85_00105 PF00448 SRP54-type protein, GTPase domain HYG85_00105 PF02881 SRP54-type protein, helical bundle domain HYG85_00105 PF02978 Signal peptide binding domain HYG85_00110 PF04297 Putative helix-turn-helix protein, YlxM / p13 like HYG85_00115 PF00448 SRP54-type protein, GTPase domain HYG85_00115 PF02881 SRP54-type protein, helical bundle domain HYG85_00120 PF06470 SMC proteins Flexible Hinge Domain HYG85_00120 PF02463 RecF/RecN/SMC N terminal domain HYG85_00125 PF00035 Double-stranded RNA binding motif HYG85_00125 PF14622 Ribonuclease-III-like HYG85_00130 PF00550 Phosphopantetheine attachment site HYG85_00135 PF02504 Fatty acid synthesis protein HYG85_00140 PF01783 Ribosomal L32p protein family HYG85_00150 PF00871 Acetokinase family HYG85_00155 PF01515 Phosphate acetyl/butaryl transferase HYG85_00160 PF05636 HIGH Nucleotidyl Transferase HYG85_00175 PF01467 Cytidylyltransferase-like HYG85_00185 PF00269 Small, acid-soluble spore proteins, alpha/beta type HYG85_00190 PF00270 DEAD/DEAH box helicase HYG85_00190 PF00271 Helicase conserved C-terminal domain HYG85_00190 PF17191 RecG wedge domain HYG85_00195 PF13684 Dihydroxyacetone kinase family HYG85_00195 PF02734 DAK2 domain HYG85_00200 PF03780 Asp23 family, cell envelope-related function HYG85_00205 PF00830 Ribosomal L28 family HYG85_00215 PF00834 Ribulose-phosphate 3 epimerase family HYG85_00220 PF03193 RsgA GTPase HYG85_00220 PF16745 RsgA N-terminal domain HYG85_00225 PF03793 PASTA domain HYG85_00225 PF00069 Protein kinase domain HYG85_00235 PF04055 Radical SAM superfamily HYG85_00240 PF01189 16S rRNA methyltransferase RsmB/F HYG85_00240 PF01029 NusB family HYG85_00245 PF04298 Putative neutral zinc metallopeptidase HYG85_00250 PF02911 Formyl transferase, C-terminal domain HYG85_00250 PF00551 Formyl transferase HYG85_00255 PF01327 Polypeptide deformylase HYG85_00260 PF18319 PriA DNA helicase Cys-rich region (CRR) domain HYG85_00260 PF17764 3′ DNA-binding domain (3′BD) HYG85_00260 PF18074 Primosomal protein N C-terminal domain HYG85_00260 PF04851 Type III restriction enzyme, res subunit HYG85_00260 PF00271 Helicase conserved C-terminal domain HYG85_00265 PF01192 RNA polymerase Rpb6 HYG85_00270 PF00625 Guanylate kinase HYG85_00275 PF04025 Domain of unknown function (DUF370) HYG85_00280 PF08340 Domain of unknown function (DUF1732) HYG85_00280 PF03755 YicC-like family, N-terminal region HYG85_00290 PF00356 Bacterial regulatory proteins, lacI family HYG85_00290 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family HYG85_00300 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_00305 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_00310 PF01547 Bacterial extracellular solute-binding protein HYG85_00315 PF01588 Putative tRNA binding domain HYG85_00315 PF09334 tRNA synthetases class I (M) HYG85_00315 PF08264 Anticodon-binding domain of tRNA HYG85_00320 PF00285 Citrate synthase, C-terminal domain HYG85_00325 PF05670 NFACT protein RNA binding domain HYG85_00340 PF02522 Aminoglycoside 3-N-acetyltransferase HYG85_00345 PF02637 GatB domain HYG85_00345 PF02934 GatB/GatE catalytic domain HYG85_00350 PF01425 Amidase HYG85_00355 PF02686 Glu-tRNAGln amidotransferase C subunit HYG85_00360 PF00533 BRCA1 C Terminus (BRCT) domain HYG85_00360 PF01653 NAD-dependent DNA ligase adenylation domain HYG85_00360 PF03120 NAD-dependent DNA ligase OB-fold domain HYG85_00360 PF12826 Helix-hairpin-helix motif HYG85_00380 PF01709 Transcriptional regulator HYG85_00385 PF01554 MatE HYG85_00395 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system HYG85_00400 PF01168 Alanine racemase, N-terminal domain HYG85_00400 PF00842 Alanine racemase, C-terminal domain HYG85_00405 PF03853 YjeF-related protein N-terminus HYG85_00405 PF01256 Carbohydrate kinase HYG85_00410 PF01648 4'-phosphopantetheinyl transferase superfamily HYG85_00420 PF06971 Putative DNA-binding protein N-terminus HYG85_00420 PF02629 CoA binding domain HYG85_00430 PF12848 ABC transporter HYG85_00430 PF00005 ABC transporter HYG85_00430 PF16326 ABC transporter C-terminal domain HYG85_00435 PF00392 Bacterial regulatory proteins, gntR family HYG85_00435 PF07729 FCD domain HYG85_00440 PF00180 Isocitrate/isopropylmalate dehydrogenase HYG85_00440 PF18324 Hypothetical protein TT1725 HYG85_00445 PF00330 Aconitase family (aconitate hydratase) HYG85_00460 PF00082 Subtilase family HYG85_00485 PF00872 Transposase, Mutator family HYG85_00490 PF08264 Anticodon-binding domain of tRNA HYG85_00490 PF00133 tRNA synthetases class I (I, L, M and V) HYG85_00490 PF09334 tRNA synthetases class I (M) HYG85_00490 PF13603 Leucyl-tRNA synthetase, Domain 2 HYG85_00525 PF03144 Elongation factor Tu domain 2 HYG85_00525 PF00009 Elongation factor Tu GTP binding domain HYG85_00525 PF03764 Elongation factor G, domain IV HYG85_00525 PF14492 Elongation Factor G, domain II HYG85_00525 PF00679 Elongation factor G C-terminus HYG85_00530 PF00155 Aminotransferase class I and II HYG85_00535 PF00793 DAHP synthetase I family HYG85_00535 PF18152 DAHP synthase ferredoxin-like domain HYG85_00540 PF01842 ACT domain HYG85_00540 PF02153 Prephenate dehydrogenase HYG85_00545 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HYG85_00560 PF00365 Phosphofructokinase HYG85_00565 PF01979 Amidohydrolase family HYG85_00570 PF13382 Adenine deaminase C-terminal domain HYG85_00570 PF01979 Amidohydrolase family HYG85_00575 PF13416 Bacterial extracellular solute-binding protein HYG85_00580 PF08402 TOBE domain HYG85_00580 PF00005 ABC transporter HYG85_00585 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_00590 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_00595 PF00860 Permease family HYG85_00600 PF01966 HD domain HYG85_00600 PF11871 Domain of unknown function (DUF3391) HYG85_00605 PF16916 Dimerisation domain of Zinc Transporter HYG85_00605 PF01545 Cation efflux family HYG85_00610 PF08402 TOBE domain HYG85_00610 PF00005 ABC transporter HYG85_00615 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_00620 PF01547 Bacterial extracellular solute-binding protein HYG85_00625 PF00004 ATPase family associated with various cellular activities (AAA) HYG85_00625 PF17871 AAA lid domain HYG85_00625 PF02861 Clp amino terminal domain, pathogenicity island component HYG85_00625 PF10431 C-terminal, D2-small domain, of ClpB protein HYG85_00625 PF07724 AAA domain (Cdc48 subfamily) HYG85_00630 PF00226 DnaJ domain HYG85_00630 PF01556 DnaJ C terminal domain HYG85_00640 PF00291 Pyridoxal-phosphate dependent enzyme HYG85_00640 PF14821 Threonine synthase N terminus HYG85_00645 PF07486 Cell Wall Hydrolase HYG85_00645 PF01471 Putative peptidoglycan binding domain HYG85_00655 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HYG85_00655 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HYG85_00670 PF00037 4Fe-4S binding domain HYG85_00670 PF02256 Iron hydrogenase small subunit HYG85_00670 PF02906 Iron only hydrogenase large subunit, C-terminal domain HYG85_00670 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region HYG85_00675 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region HYG85_00675 PF00037 4Fe-4S binding domain HYG85_00675 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit HYG85_00695 PF05504 Spore germination B3/ GerAC like, C-terminal HYG85_00700 PF03845 Spore germination protein HYG85_00705 PF03323 Bacillus/Clostridium GerA spore germination protein HYG85_00725 PF00072 Response regulator receiver domain HYG85_00725 PF00486 Transcriptional regulatory protein, C terminal HYG85_00730 PF00672 HAMP domain HYG85_00730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYG85_00730 PF00512 His Kinase A (phospho-acceptor) domain HYG85_00735 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HYG85_00735 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HYG85_00735 PF03129 Anticodon binding domain HYG85_00740 PF01784 NIF3 (NGG1p interacting factor 3) HYG85_00750 PF03979 Sigma-70 factor, region 1.1 HYG85_00750 PF00140 Sigma-70 factor, region 1.2 HYG85_00750 PF04542 Sigma-70 region 2 HYG85_00750 PF04539 Sigma-70 region 3 HYG85_00750 PF04545 Sigma-70, region 4 HYG85_00755 PF08275 DNA primase catalytic core, N-terminal domain HYG85_00755 PF10410 DnaB-helicase binding domain of primase HYG85_00755 PF01807 CHC2 zinc finger HYG85_00760 PF13286 Phosphohydrolase-associated domain HYG85_00760 PF01966 HD domain HYG85_00765 PF07670 Nucleoside recognition HYG85_00765 PF02421 Ferrous iron transport protein B HYG85_00765 PF17910 FeoB cytosolic helical domain HYG85_00765 PF07664 Ferrous iron transport protein B C terminus HYG85_00775 PF04286 Protein of unknown function (DUF445) HYG85_00780 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain HYG85_00780 PF00391 PEP-utilising enzyme, mobile domain HYG85_00780 PF02896 PEP-utilising enzyme, TIM barrel domain HYG85_00785 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HYG85_00785 PF03129 Anticodon binding domain HYG85_00795 PF02565 Recombination protein O C terminal HYG85_00795 PF11967 Recombination protein O N terminal HYG85_00800 PF02687 FtsX-like permease family HYG85_00800 PF12704 MacB-like periplasmic core domain HYG85_00810 PF00005 ABC transporter HYG85_00815 PF01548 Transposase HYG85_00815 PF02371 Transposase IS116/IS110/IS902 family HYG85_00820 PF00512 His Kinase A (phospho-acceptor) domain HYG85_00825 PF00486 Transcriptional regulatory protein, C terminal HYG85_00825 PF00072 Response regulator receiver domain HYG85_00830 PF00132 Bacterial transferase hexapeptide (six repeats) HYG85_00835 PF02743 Cache domain HYG85_00835 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HYG85_00835 PF00672 HAMP domain HYG85_00840 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HYG85_00840 PF00672 HAMP domain HYG85_00840 PF02743 Cache domain HYG85_00845 PF01613 Flavin reductase like domain HYG85_00860 PF00294 pfkB family carbohydrate kinase HYG85_00865 PF01081 KDPG and KHG aldolase HYG85_00870 PF02614 Glucuronate isomerase HYG85_00875 PF00356 Bacterial regulatory proteins, lacI family HYG85_00885 PF07650 KH domain HYG85_00885 PF01926 50S ribosome-binding GTPase HYG85_00890 PF00675 Insulinase (Peptidase family M16) HYG85_00890 PF05193 Peptidase M16 inactive domain HYG85_00890 PF08367 Peptidase M16C associated HYG85_00895 PF13185 GAF domain HYG85_00900 PF00005 ABC transporter HYG85_00915 PF00313 'Cold-shock' DNA-binding domain HYG85_00930 PF02142 MGS-like domain HYG85_00930 PF01808 AICARFT/IMPCHase bienzyme HYG85_00935 PF02901 Pyruvate formate lyase-like HYG85_00935 PF01228 Glycine radical HYG85_00955 PF06964 Alpha-L-arabinofuranosidase C-terminal domain HYG85_00955 PF02018 Carbohydrate binding domain HYG85_00980 PF18073 Rubredoxin metal binding domain HYG85_00990 PF02899 Phage integrase, N-terminal SAM-like domain HYG85_00990 PF00589 Phage integrase family HYG85_01015 PF02540 NAD synthase HYG85_01015 PF00117 Glutamine amidotransferase class-I HYG85_01015 PF00958 GMP synthase C terminal domain HYG85_01020 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_01025 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_01030 PF13416 Bacterial extracellular solute-binding protein HYG85_01035 PF00356 Bacterial regulatory proteins, lacI family HYG85_01035 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family HYG85_01040 PF03633 Glycosyl hydrolase family 65, C-terminal domain HYG85_01040 PF03632 Glycosyl hydrolase family 65 central catalytic domain HYG85_01040 PF03636 Glycosyl hydrolase family 65, N-terminal domain HYG85_01045 PF16736 Single Cache-like HYG85_01045 PF00989 PAS fold HYG85_01045 PF00512 His Kinase A (phospho-acceptor) domain HYG85_01045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYG85_01050 PF00072 Response regulator receiver domain HYG85_01050 PF00486 Transcriptional regulatory protein, C terminal HYG85_01055 PF01895 PhoU domain HYG85_01060 PF00005 ABC transporter HYG85_01065 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_01070 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_01075 PF12849 PBP superfamily domain HYG85_01080 PF00571 CBS domain HYG85_01080 PF00478 IMP dehydrogenase / GMP reductase domain HYG85_01090 PF00118 TCP-1/cpn60 chaperonin family HYG85_01095 PF00166 Chaperonin 10 Kd subunit HYG85_01120 PF03062 MBOAT, membrane-bound O-acyltransferase family HYG85_01140 PF04542 Sigma-70 region 2 HYG85_01140 PF08281 Sigma-70, region 4 HYG85_01145 PF05991 YacP-like NYN domain HYG85_01150 PF02837 Glycosyl hydrolases family 2, sugar binding domain HYG85_01150 PF02836 Glycosyl hydrolases family 2, TIM barrel domain HYG85_01150 PF00703 Glycosyl hydrolases family 2 HYG85_01150 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 HYG85_01150 PF16355 Domain of unknown function (DUF4982) HYG85_01155 PF08032 RNA 2'-O ribose methyltransferase substrate binding HYG85_01155 PF00588 SpoU rRNA Methylase family HYG85_01160 PF01943 Polysaccharide biosynthesis protein HYG85_01160 PF14667 Polysaccharide biosynthesis C-terminal domain HYG85_01165 PF00636 Ribonuclease III domain HYG85_01170 PF01406 tRNA synthetases class I (C) catalytic domain HYG85_01170 PF09190 DALR domain HYG85_01175 PF00132 Bacterial transferase hexapeptide (six repeats) HYG85_01185 PF00884 Sulfatase HYG85_01185 PF16347 Domain of unknown function (DUF4976) HYG85_01195 PF02001 Protein of unknown function DUF134 HYG85_01200 PF10609 NUBPL iron-transfer P-loop NTPase HYG85_01205 PF00440 Bacterial regulatory proteins, tetR family HYG85_01210 PF02836 Glycosyl hydrolases family 2, TIM barrel domain HYG85_01210 PF00703 Glycosyl hydrolases family 2 HYG85_01210 PF02837 Glycosyl hydrolases family 2, sugar binding domain HYG85_01210 PF02929 Beta galactosidase small chain HYG85_01210 PF16353 Domain of unknown function(DUF4981) HYG85_01215 PF08000 Bacterial PH domain HYG85_01220 PF05547 Immune inhibitor A peptidase M6 HYG85_01220 PF00801 PKD domain HYG85_01225 PF02542 YgbB family HYG85_01230 PF06874 Firmicute fructose-1,6-bisphosphatase HYG85_01240 PF07992 Pyridine nucleotide-disulphide oxidoreductase HYG85_01240 PF04324 BFD-like [2Fe-2S] binding domain HYG85_01245 PF01266 FAD dependent oxidoreductase HYG85_01260 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) HYG85_01265 PF03334 Na+/H+ antiporter subunit HYG85_01280 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter HYG85_01285 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L HYG85_01290 PF00361 Proton-conducting membrane transporter HYG85_01295 PF04239 Protein of unknown function (DUF421) HYG85_01305 PF00005 ABC transporter HYG85_01305 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HYG85_01310 PF00005 ABC transporter HYG85_01310 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HYG85_01315 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_01315 PF12911 N-terminal TM domain of oligopeptide transport permease C HYG85_01320 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_01325 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HYG85_01365 PF07486 Cell Wall Hydrolase HYG85_01370 PF09335 SNARE associated Golgi protein HYG85_01380 PF00271 Helicase conserved C-terminal domain HYG85_01380 PF00270 DEAD/DEAH box helicase HYG85_01395 PF00005 ABC transporter HYG85_01410 PF13732 Domain of unknown function (DUF4162) HYG85_01410 PF00005 ABC transporter HYG85_01415 PF00440 Bacterial regulatory proteins, tetR family HYG85_01415 PF17932 Tetracyclin repressor-like, C-terminal domain HYG85_01420 PF00171 Aldehyde dehydrogenase family HYG85_01430 PF04962 KduI/IolB family HYG85_01435 PF09339 IclR helix-turn-helix domain HYG85_01435 PF01614 Bacterial transcriptional regulator HYG85_01440 PF11954 Domain of unknown function (DUF3471) HYG85_01440 PF00144 Beta-lactamase HYG85_01515 PF13181 Tetratricopeptide repeat HYG85_01515 PF17128 Domain of unknown function (DUF5107) HYG85_01520 PF02311 AraC-like ligand binding domain HYG85_01520 PF12833 Helix-turn-helix domain HYG85_01525 PF00923 Transaldolase/Fructose-6-phosphate aldolase HYG85_01540 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HYG85_01540 PF00672 HAMP domain HYG85_01555 PF01008 Initiation factor 2 subunit family HYG85_01560 PF01636 Phosphotransferase enzyme family HYG85_01565 PF01261 Xylose isomerase-like TIM barrel HYG85_01575 PF02525 Flavodoxin-like fold HYG85_01580 PF17783 CvfB-like winged helix domain HYG85_01580 PF13509 S1 domain HYG85_01585 PF00005 ABC transporter HYG85_01585 PF12848 ABC transporter HYG85_01595 PF00480 ROK family HYG85_01605 PF13247 4Fe-4S dicluster domain HYG85_01630 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain HYG85_01635 PF10609 NUBPL iron-transfer P-loop NTPase HYG85_01645 PF01048 Phosphorylase superfamily HYG85_01655 PF04055 Radical SAM superfamily HYG85_01655 PF06968 Biotin and Thiamin Synthesis associated domain HYG85_01665 PF03932 CutC family HYG85_01670 PF02789 Cytosol aminopeptidase family, N-terminal domain HYG85_01670 PF00883 Cytosol aminopeptidase family, catalytic domain HYG85_01680 PF02371 Transposase IS116/IS110/IS902 family HYG85_01680 PF01548 Transposase HYG85_01685 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_01690 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_01700 PF07694 5TMR of 5TMR-LYT HYG85_01700 PF13492 GAF domain HYG85_01700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYG85_01700 PF06580 Histidine kinase HYG85_01705 PF12833 Helix-turn-helix domain HYG85_01705 PF00072 Response regulator receiver domain HYG85_01710 PF01212 Beta-eliminating lyase HYG85_01715 PF08305 NPCBM/NEW2 domain HYG85_01715 PF08306 Glycosyl hydrolase family 98 HYG85_01715 PF08307 Glycosyl hydrolase family 98 C-terminal domain HYG85_01725 PF12833 Helix-turn-helix domain HYG85_01750 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_01755 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_01760 PF01547 Bacterial extracellular solute-binding protein HYG85_01765 PF12833 Helix-turn-helix domain HYG85_01765 PF00072 Response regulator receiver domain HYG85_01770 PF00672 HAMP domain HYG85_01770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYG85_01770 PF06580 Histidine kinase HYG85_01770 PF02743 Cache domain HYG85_01775 PF13416 Bacterial extracellular solute-binding protein HYG85_01805 PF05378 Hydantoinase/oxoprolinase N-terminal region HYG85_01805 PF01968 Hydantoinase/oxoprolinase HYG85_01820 PF00722 Glycosyl hydrolases family 16 HYG85_01820 PF02018 Carbohydrate binding domain HYG85_01825 PF08281 Sigma-70, region 4 HYG85_01825 PF04542 Sigma-70 region 2 HYG85_01835 PF00795 Carbon-nitrogen hydrolase HYG85_01930 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_01935 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_01945 PF00072 Response regulator receiver domain HYG85_01945 PF12833 Helix-turn-helix domain HYG85_01950 PF06580 Histidine kinase HYG85_01950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYG85_01950 PF00672 HAMP domain HYG85_01950 PF02743 Cache domain HYG85_01980 PF00394 Multicopper oxidase HYG85_01980 PF07731 Multicopper oxidase HYG85_01980 PF07732 Multicopper oxidase HYG85_01995 PF04542 Sigma-70 region 2 HYG85_01995 PF08281 Sigma-70, region 4 HYG85_02005 PF00905 Penicillin binding protein transpeptidase domain HYG85_02005 PF05569 BlaR1 peptidase M56 HYG85_02010 PF03965 Penicillinase repressor HYG85_02015 PF00294 pfkB family carbohydrate kinase HYG85_02020 PF07729 FCD domain HYG85_02020 PF00392 Bacterial regulatory proteins, gntR family HYG85_02025 PF00188 Cysteine-rich secretory protein family HYG85_02035 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HYG85_02035 PF07992 Pyridine nucleotide-disulphide oxidoreductase HYG85_02045 PF02028 BCCT, betaine/carnitine/choline family transporter HYG85_02060 PF01022 Bacterial regulatory protein, arsR family HYG85_02065 PF00390 Malic enzyme, N-terminal domain HYG85_02065 PF03949 Malic enzyme, NAD binding domain HYG85_02070 PF00581 Rhodanese-like domain HYG85_02075 PF03553 Na+/H+ antiporter family HYG85_02080 PF01869 BadF/BadG/BcrA/BcrD ATPase family HYG85_02085 PF02743 Cache domain HYG85_02085 PF00672 HAMP domain HYG85_02085 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HYG85_02090 PF00207 Alpha-2-macroglobulin family HYG85_02090 PF07703 Alpha-2-macroglobulin bait region domain HYG85_02090 PF01835 MG2 domain HYG85_02120 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HYG85_02120 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HYG85_02135 PF07476 Methylaspartate ammonia-lyase C-terminus HYG85_02135 PF05034 Methylaspartate ammonia-lyase N-terminus HYG85_02140 PF06368 Methylaspartate mutase E chain (MutE) HYG85_02145 PF13941 MutL protein HYG85_02150 PF02310 B12 binding domain HYG85_02155 PF04055 Radical SAM superfamily HYG85_02155 PF13186 Iron-sulfur cluster-binding domain HYG85_02175 PF02311 AraC-like ligand binding domain HYG85_02175 PF12833 Helix-turn-helix domain HYG85_02255 PF05067 Manganese containing catalase HYG85_02265 PF02872 5'-nucleotidase, C-terminal domain HYG85_02265 PF00149 Calcineurin-like phosphoesterase HYG85_02285 PF03009 Glycerophosphoryl diester phosphodiesterase family HYG85_02290 PF00005 ABC transporter HYG85_02305 PF01116 Fructose-bisphosphate aldolase class-II HYG85_02310 PF10114 Sensory domain found in PocR HYG85_02310 PF12833 Helix-turn-helix domain HYG85_02315 PF00175 Oxidoreductase NAD-binding domain HYG85_02315 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B HYG85_02320 PF07992 Pyridine nucleotide-disulphide oxidoreductase HYG85_02320 PF13247 4Fe-4S dicluster domain HYG85_02320 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster HYG85_02325 PF00465 Iron-containing alcohol dehydrogenase HYG85_02335 PF01554 MatE HYG85_02370 PF01969 Protein of unknown function DUF111 HYG85_02390 PF07885 Ion channel HYG85_02390 PF02254 TrkA-N domain HYG85_02425 PF04012 PspA/IM30 family HYG85_02430 PF02675 S-adenosylmethionine decarboxylase HYG85_02445 PF00950 ABC 3 transport family HYG85_02450 PF00950 ABC 3 transport family HYG85_02455 PF00005 ABC transporter HYG85_02460 PF01297 Zinc-uptake complex component A periplasmic HYG85_02475 PF01523 Putative modulator of DNA gyrase HYG85_02480 PF01523 Putative modulator of DNA gyrase HYG85_02490 PF17156 Gammaproteobacterial periplasmic sensor domain HYG85_02490 PF00990 Diguanylate cyclase, GGDEF domain HYG85_02525 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain HYG85_02525 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain HYG85_02525 PF06827 Zinc finger found in FPG and IleRS HYG85_02530 PF00512 His Kinase A (phospho-acceptor) domain HYG85_02530 PF00672 HAMP domain HYG85_02530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYG85_02535 PF00072 Response regulator receiver domain HYG85_02535 PF00486 Transcriptional regulatory protein, C terminal HYG85_02545 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HYG85_02545 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HYG85_02550 PF00391 PEP-utilising enzyme, mobile domain HYG85_02550 PF00224 Pyruvate kinase, barrel domain HYG85_02550 PF02887 Pyruvate kinase, alpha/beta domain HYG85_02555 PF01894 Uncharacterised protein family UPF0047 HYG85_02585 PF14791 DNA polymerase beta thumb HYG85_02585 PF02811 PHP domain HYG85_02585 PF14716 Helix-hairpin-helix domain HYG85_02590 PF02586 SOS response associated peptidase (SRAP) HYG85_02600 PF00465 Iron-containing alcohol dehydrogenase HYG85_02605 PF01479 S4 domain HYG85_02605 PF00579 tRNA synthetases class I (W and Y) HYG85_02610 PF03649 Uncharacterised protein family (UPF0014) HYG85_02615 PF00005 ABC transporter HYG85_02620 PF03551 Transcriptional regulator PadR-like family HYG85_02635 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_02640 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_02650 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family HYG85_02650 PF00356 Bacterial regulatory proteins, lacI family HYG85_02665 PF02774 Semialdehyde dehydrogenase, dimerisation domain HYG85_02665 PF01118 Semialdehyde dehydrogenase, NAD binding domain HYG85_02675 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) HYG85_02690 PF00005 ABC transporter HYG85_02690 PF12848 ABC transporter HYG85_02695 PF02447 GntP family permease HYG85_02700 PF02595 Glycerate kinase family HYG85_02705 PF13556 PucR C-terminal helix-turn-helix domain HYG85_02705 PF17853 GGDEF-like domain HYG85_02705 PF05651 Putative sugar diacid recognition HYG85_02710 PF01797 Transposase IS200 like HYG85_02715 PF00156 Phosphoribosyl transferase domain HYG85_02740 PF00072 Response regulator receiver domain HYG85_02740 PF00486 Transcriptional regulatory protein, C terminal HYG85_02745 PF18698 Histidine kinase sensor domain HYG85_02745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYG85_02745 PF00672 HAMP domain HYG85_02745 PF00989 PAS fold HYG85_02745 PF00512 His Kinase A (phospho-acceptor) domain HYG85_02750 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 HYG85_02750 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) HYG85_02760 PF07731 Multicopper oxidase HYG85_02760 PF07732 Multicopper oxidase HYG85_02760 PF00394 Multicopper oxidase HYG85_02780 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) HYG85_02785 PF01975 Survival protein SurE HYG85_02800 PF00156 Phosphoribosyl transferase domain HYG85_02810 PF00596 Class II Aldolase and Adducin N-terminal domain HYG85_02815 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HYG85_02815 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HYG85_02820 PF04055 Radical SAM superfamily HYG85_02825 PF02901 Pyruvate formate lyase-like HYG85_02825 PF01228 Glycine radical HYG85_02830 PF00356 Bacterial regulatory proteins, lacI family HYG85_02840 PF12833 Helix-turn-helix domain HYG85_02850 PF00872 Transposase, Mutator family HYG85_02870 PF01613 Flavin reductase like domain HYG85_02875 PF01113 Dihydrodipicolinate reductase, N-terminus HYG85_02875 PF16654 Diaminopimelic acid dehydrogenase C-terminal domain HYG85_02880 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) HYG85_02885 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) HYG85_02890 PF00872 Transposase, Mutator family HYG85_02905 PF00440 Bacterial regulatory proteins, tetR family HYG85_02930 PF02001 Protein of unknown function DUF134 HYG85_02950 PF01475 Ferric uptake regulator family HYG85_02955 PF01458 Uncharacterized protein family (UPF0051) HYG85_02960 PF00005 ABC transporter HYG85_02985 PF00578 AhpC/TSA family HYG85_02985 PF10417 C-terminal domain of 1-Cys peroxiredoxin HYG85_03000 PF00005 ABC transporter HYG85_03005 PF01032 FecCD transport family HYG85_03015 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family HYG85_03020 PF06719 AraC-type transcriptional regulator N-terminus HYG85_03020 PF12833 Helix-turn-helix domain HYG85_03025 PF01557 Fumarylacetoacetate (FAA) hydrolase family HYG85_03030 PF13411 MerR HTH family regulatory protein HYG85_03040 PF00664 ABC transporter transmembrane region HYG85_03040 PF00005 ABC transporter HYG85_03045 PF00664 ABC transporter transmembrane region HYG85_03045 PF00005 ABC transporter HYG85_03050 PF01047 MarR family HYG85_03060 PF00403 Heavy-metal-associated domain HYG85_03070 PF04029 2-phosphosulpholactate phosphatase HYG85_03080 PF05569 BlaR1 peptidase M56 HYG85_03080 PF00905 Penicillin binding protein transpeptidase domain HYG85_03085 PF03965 Penicillinase repressor HYG85_03090 PF12833 Helix-turn-helix domain HYG85_03095 PF00664 ABC transporter transmembrane region HYG85_03095 PF00005 ABC transporter HYG85_03100 PF00664 ABC transporter transmembrane region HYG85_03100 PF00005 ABC transporter HYG85_03105 PF01554 MatE HYG85_03110 PF00294 pfkB family carbohydrate kinase HYG85_03115 PF01548 Transposase HYG85_03115 PF02371 Transposase IS116/IS110/IS902 family HYG85_03120 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HYG85_03125 PF00005 ABC transporter HYG85_03125 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HYG85_03130 PF00005 ABC transporter HYG85_03135 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_03135 PF12911 N-terminal TM domain of oligopeptide transport permease C HYG85_03140 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_03150 PF00005 ABC transporter HYG85_03155 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_03165 PF00331 Glycosyl hydrolase family 10 HYG85_03165 PF07859 alpha/beta hydrolase fold HYG85_03180 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HYG85_03180 PF00672 HAMP domain HYG85_03180 PF02743 Cache domain HYG85_03190 PF01451 Low molecular weight phosphotyrosine protein phosphatase HYG85_03200 PF00005 ABC transporter HYG85_03200 PF08402 TOBE domain HYG85_03210 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HYG85_03210 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HYG85_03215 PF01261 Xylose isomerase-like TIM barrel HYG85_03225 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HYG85_03225 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HYG85_03230 PF00356 Bacterial regulatory proteins, lacI family HYG85_03245 PF00005 ABC transporter HYG85_03260 PF00395 S-layer homology domain HYG85_03265 PF00963 Cohesin domain HYG85_03265 PF00395 S-layer homology domain HYG85_03275 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HYG85_03280 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HYG85_03280 PF00005 ABC transporter HYG85_03285 PF00005 ABC transporter HYG85_03290 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_03290 PF12911 N-terminal TM domain of oligopeptide transport permease C HYG85_03295 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_03300 PF00664 ABC transporter transmembrane region HYG85_03300 PF00005 ABC transporter HYG85_03305 PF00664 ABC transporter transmembrane region HYG85_03305 PF00005 ABC transporter HYG85_03310 PF12833 Helix-turn-helix domain HYG85_03315 PF07729 FCD domain HYG85_03315 PF00392 Bacterial regulatory proteins, gntR family HYG85_03320 PF03788 LrgA family HYG85_03325 PF04172 LrgB-like family HYG85_03330 PF01551 Peptidase family M23 HYG85_03335 PF02836 Glycosyl hydrolases family 2, TIM barrel domain HYG85_03335 PF02837 Glycosyl hydrolases family 2, sugar binding domain HYG85_03335 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 HYG85_03335 PF00703 Glycosyl hydrolases family 2 HYG85_03340 PF12833 Helix-turn-helix domain HYG85_03345 PF02581 Thiamine monophosphate synthase HYG85_03350 PF06968 Biotin and Thiamin Synthesis associated domain HYG85_03350 PF04055 Radical SAM superfamily HYG85_03355 PF05690 Thiazole biosynthesis protein ThiG HYG85_03360 PF00581 Rhodanese-like domain HYG85_03360 PF00899 ThiF family HYG85_03370 PF00664 ABC transporter transmembrane region HYG85_03370 PF00005 ABC transporter HYG85_03375 PF00664 ABC transporter transmembrane region HYG85_03375 PF00005 ABC transporter HYG85_03380 PF13802 Galactose mutarotase-like HYG85_03380 PF17137 Domain of unknown function (DUF5110) HYG85_03380 PF01055 Glycosyl hydrolases family 31 HYG85_03380 PF16338 Domain of unknown function (DUF4968) HYG85_03385 PF13802 Galactose mutarotase-like HYG85_03385 PF01055 Glycosyl hydrolases family 31 HYG85_03395 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_03400 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_03410 PF00005 ABC transporter HYG85_03425 PF00664 ABC transporter transmembrane region HYG85_03425 PF00005 ABC transporter HYG85_03430 PF00005 ABC transporter HYG85_03430 PF00664 ABC transporter transmembrane region HYG85_03435 PF12833 Helix-turn-helix domain HYG85_03440 PF00005 ABC transporter HYG85_03460 PF13280 WYL domain HYG85_03460 PF08279 HTH domain HYG85_03470 PF08240 Alcohol dehydrogenase GroES-like domain HYG85_03470 PF00107 Zinc-binding dehydrogenase HYG85_03475 PF00440 Bacterial regulatory proteins, tetR family HYG85_03480 PF01636 Phosphotransferase enzyme family HYG85_03485 PF01008 Initiation factor 2 subunit family HYG85_03495 PF00596 Class II Aldolase and Adducin N-terminal domain HYG85_03500 PF00465 Iron-containing alcohol dehydrogenase HYG85_03505 PF00455 DeoR C terminal sensor domain HYG85_03505 PF08220 DeoR-like helix-turn-helix domain HYG85_03510 PF01209 ubiE/COQ5 methyltransferase family HYG85_03540 PF03965 Penicillinase repressor HYG85_03555 PF13280 WYL domain HYG85_03555 PF08279 HTH domain HYG85_03560 PF00005 ABC transporter HYG85_03560 PF12848 ABC transporter HYG85_03580 PF03773 Predicted permease HYG85_03585 PF01638 HxlR-like helix-turn-helix HYG85_03590 PF04205 FMN-binding domain HYG85_03590 PF12801 4Fe-4S binding domain HYG85_03595 PF00578 AhpC/TSA family HYG85_03600 PF11756 Nitrous oxide-stimulated promoter HYG85_03605 PF00005 ABC transporter HYG85_03605 PF00664 ABC transporter transmembrane region HYG85_03610 PF00664 ABC transporter transmembrane region HYG85_03610 PF00005 ABC transporter HYG85_03615 PF04304 Protein of unknown function (DUF454) HYG85_03620 PF02311 AraC-like ligand binding domain HYG85_03620 PF12833 Helix-turn-helix domain HYG85_03625 PF08220 DeoR-like helix-turn-helix domain HYG85_03625 PF00455 DeoR C terminal sensor domain HYG85_03630 PF04166 Pyridoxal phosphate biosynthetic protein PdxA HYG85_03635 PF17042 Nucleotide-binding C-terminal domain HYG85_03635 PF07005 Sugar-binding N-terminal domain HYG85_03640 PF03812 2-keto-3-deoxygluconate permease HYG85_03645 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain HYG85_03650 PF16653 Saccharopine dehydrogenase C-terminal domain HYG85_03650 PF03435 Saccharopine dehydrogenase NADP binding domain HYG85_03655 PF00491 Arginase family HYG85_03660 PF17810 Arginine decarboxylase helical bundle domain HYG85_03660 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain HYG85_03660 PF17944 Arginine decarboxylase C-terminal helical extension HYG85_03670 PF12801 4Fe-4S binding domain HYG85_03690 PF00717 Peptidase S24-like HYG85_03690 PF01726 LexA DNA binding domain HYG85_03705 PF00005 ABC transporter HYG85_03725 PF00005 ABC transporter HYG85_03725 PF00664 ABC transporter transmembrane region HYG85_03730 PF04954 Siderophore-interacting protein HYG85_03730 PF00664 ABC transporter transmembrane region HYG85_03730 PF08021 Siderophore-interacting FAD-binding domain HYG85_03730 PF00005 ABC transporter HYG85_03755 PF00392 Bacterial regulatory proteins, gntR family HYG85_03755 PF07729 FCD domain HYG85_03760 PF03594 Benzoate membrane transport protein HYG85_03785 PF03062 MBOAT, membrane-bound O-acyltransferase family HYG85_03790 PF00550 Phosphopantetheine attachment site HYG85_03795 PF00501 AMP-binding enzyme HYG85_03795 PF13193 AMP-binding enzyme C-terminal domain HYG85_03810 PF00672 HAMP domain HYG85_03810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYG85_03810 PF00512 His Kinase A (phospho-acceptor) domain HYG85_03815 PF00072 Response regulator receiver domain HYG85_03815 PF00486 Transcriptional regulatory protein, C terminal HYG85_03840 PF12833 Helix-turn-helix domain HYG85_03840 PF06445 GyrI-like small molecule binding domain HYG85_03850 PF00664 ABC transporter transmembrane region HYG85_03850 PF00005 ABC transporter HYG85_03855 PF00005 ABC transporter HYG85_03855 PF00664 ABC transporter transmembrane region HYG85_03895 PF01719 Plasmid replication protein HYG85_03895 PF00910 RNA helicase HYG85_03910 PF00892 EamA-like transporter family HYG85_03925 PF13732 Domain of unknown function (DUF4162) HYG85_03925 PF00005 ABC transporter HYG85_03930 PF00271 Helicase conserved C-terminal domain HYG85_03930 PF04851 Type III restriction enzyme, res subunit HYG85_03945 PF01381 Helix-turn-helix HYG85_03945 PF13521 AAA domain HYG85_03950 PF04973 Nicotinamide mononucleotide transporter HYG85_03955 PF01467 Cytidylyltransferase-like HYG85_03955 PF00293 NUDIX domain HYG85_03975 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HYG85_03980 PF00144 Beta-lactamase HYG85_03985 PF00398 Ribosomal RNA adenine dimethylase HYG85_03990 PF00005 ABC transporter HYG85_03990 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HYG85_03995 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HYG85_03995 PF00005 ABC transporter HYG85_04000 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_04005 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_04010 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HYG85_04045 PF00753 Metallo-beta-lactamase superfamily HYG85_04045 PF00301 Rubredoxin HYG85_04045 PF00258 Flavodoxin HYG85_04060 PF13419 Haloacid dehalogenase-like hydrolase HYG85_04070 PF12833 Helix-turn-helix domain HYG85_04070 PF02311 AraC-like ligand binding domain HYG85_04085 PF01207 Dihydrouridine synthase (Dus) HYG85_04090 PF01381 Helix-turn-helix HYG85_04090 PF08671 Anti-repressor SinI HYG85_04105 PF01471 Putative peptidoglycan binding domain HYG85_04105 PF01510 N-acetylmuramoyl-L-alanine amidase HYG85_04120 PF18413 Neuraminidase-like domain HYG85_04120 PF18276 Tc toxin complex TcA C-terminal TcB-binding domain HYG85_04120 PF18413 Neuraminidase-like domain HYG85_04120 PF18276 Tc toxin complex TcA C-terminal TcB-binding domain HYG85_04160 PF01047 MarR family HYG85_04165 PF01212 Beta-eliminating lyase HYG85_04175 PF02386 Cation transport protein HYG85_04180 PF02254 TrkA-N domain HYG85_04180 PF02080 TrkA-C domain HYG85_04185 PF02080 TrkA-C domain HYG85_04185 PF02254 TrkA-N domain HYG85_04195 PF00072 Response regulator receiver domain HYG85_04195 PF00486 Transcriptional regulatory protein, C terminal HYG85_04200 PF13493 Domain of unknown function (DUF4118) HYG85_04200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYG85_04200 PF00512 His Kinase A (phospho-acceptor) domain HYG85_04200 PF02702 Osmosensitive K+ channel His kinase sensor domain HYG85_04210 PF05958 tRNA (Uracil-5-)-methyltransferase HYG85_04220 PF00580 UvrD/REP helicase N-terminal domain HYG85_04220 PF13361 UvrD-like helicase C-terminal domain HYG85_04230 PF01371 Trp repressor protein HYG85_04235 PF02811 PHP domain HYG85_04265 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HYG85_04265 PF02743 Cache domain HYG85_04265 PF00672 HAMP domain HYG85_04280 PF02554 Carbon starvation protein CstA HYG85_04285 PF00072 Response regulator receiver domain HYG85_04285 PF04397 LytTr DNA-binding domain HYG85_04290 PF07694 5TMR of 5TMR-LYT HYG85_04290 PF13492 GAF domain HYG85_04290 PF06580 Histidine kinase HYG85_04290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYG85_04315 PF00005 ABC transporter HYG85_04320 PF10502 Signal peptidase, peptidase S26 HYG85_04325 PF01177 Asp/Glu/Hydantoin racemase HYG85_04330 PF03193 RsgA GTPase HYG85_04335 PF00455 DeoR C terminal sensor domain HYG85_04335 PF08220 DeoR-like helix-turn-helix domain HYG85_04340 PF07005 Sugar-binding N-terminal domain HYG85_04340 PF17042 Nucleotide-binding C-terminal domain HYG85_04345 PF04166 Pyridoxal phosphate biosynthetic protein PdxA HYG85_04350 PF03480 Bacterial extracellular solute-binding protein, family 7 HYG85_04355 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component HYG85_04360 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component HYG85_04360 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component HYG85_04375 PF02796 Helix-turn-helix domain of resolvase HYG85_04375 PF00239 Resolvase, N terminal domain HYG85_04385 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_04390 PF02645 Uncharacterised protein, DegV family COG1307 HYG85_04395 PF02127 Aminopeptidase I zinc metalloprotease (M18) HYG85_04400 PF02245 Methylpurine-DNA glycosylase (MPG) HYG85_04410 PF00183 Hsp90 protein HYG85_04415 PF00701 Dihydrodipicolinate synthetase family HYG85_04420 PF01113 Dihydrodipicolinate reductase, N-terminus HYG85_04420 PF05173 Dihydrodipicolinate reductase, C-terminus HYG85_04435 PF07664 Ferrous iron transport protein B C terminus HYG85_04435 PF17910 FeoB cytosolic helical domain HYG85_04435 PF02421 Ferrous iron transport protein B HYG85_04435 PF07670 Nucleoside recognition HYG85_04515 PF00395 S-layer homology domain HYG85_04515 PF00963 Cohesin domain HYG85_04620 PF10668 Phage terminase small subunit HYG85_04625 PF00589 Phage integrase family HYG85_04625 PF18644 Phage integrase SAM-like domain HYG85_04655 PF01555 DNA methylase HYG85_04730 PF02796 Helix-turn-helix domain of resolvase HYG85_04730 PF00239 Resolvase, N terminal domain HYG85_04735 PF07670 Nucleoside recognition HYG85_04735 PF07664 Ferrous iron transport protein B C terminus HYG85_04735 PF17910 FeoB cytosolic helical domain HYG85_04735 PF02421 Ferrous iron transport protein B HYG85_04755 PF17853 GGDEF-like domain HYG85_04755 PF13556 PucR C-terminal helix-turn-helix domain HYG85_04755 PF05651 Putative sugar diacid recognition HYG85_04760 PF02447 GntP family permease HYG85_04765 PF02595 Glycerate kinase family HYG85_04770 PF01381 Helix-turn-helix HYG85_04775 PF01381 Helix-turn-helix HYG85_04780 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HYG85_04780 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HYG85_04785 PF05025 RbsD / FucU transport protein family HYG85_04790 PF00294 pfkB family carbohydrate kinase HYG85_04795 PF01116 Fructose-bisphosphate aldolase class-II HYG85_04800 PF08240 Alcohol dehydrogenase GroES-like domain HYG85_04800 PF00107 Zinc-binding dehydrogenase HYG85_04805 PF00248 Aldo/keto reductase family HYG85_04810 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family HYG85_04810 PF00356 Bacterial regulatory proteins, lacI family HYG85_04815 PF01047 MarR family HYG85_04825 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HYG85_04825 PF07992 Pyridine nucleotide-disulphide oxidoreductase HYG85_04830 PF10437 Bacterial lipoate protein ligase C-terminus HYG85_04830 PF03099 Biotin/lipoate A/B protein ligase family HYG85_04835 PF00884 Sulfatase HYG85_04860 PF01381 Helix-turn-helix HYG85_04935 PF01381 Helix-turn-helix HYG85_04970 PF02371 Transposase IS116/IS110/IS902 family HYG85_04970 PF01548 Transposase HYG85_04980 PF00239 Resolvase, N terminal domain HYG85_04980 PF02796 Helix-turn-helix domain of resolvase HYG85_04985 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain HYG85_04985 PF01522 Polysaccharide deacetylase HYG85_05000 PF03845 Spore germination protein HYG85_05010 PF03323 Bacillus/Clostridium GerA spore germination protein HYG85_05020 PF00248 Aldo/keto reductase family HYG85_05025 PF02632 BioY family HYG85_05040 PF02915 Rubrerythrin HYG85_05045 PF06397 Desulfoferrodoxin, N-terminal domain HYG85_05045 PF01880 Desulfoferrodoxin HYG85_05050 PF01205 Uncharacterized protein family UPF0029 HYG85_05050 PF09186 Domain of unknown function (DUF1949) HYG85_05055 PF03099 Biotin/lipoate A/B protein ligase family HYG85_05055 PF10437 Bacterial lipoate protein ligase C-terminus HYG85_05060 PF00933 Glycosyl hydrolase family 3 N terminal domain HYG85_05060 PF01915 Glycosyl hydrolase family 3 C-terminal domain HYG85_05060 PF14310 Fibronectin type III-like domain HYG85_05065 PF02311 AraC-like ligand binding domain HYG85_05065 PF12833 Helix-turn-helix domain HYG85_05080 PF18318 Glutamine synthetase C-terminal domain HYG85_05080 PF00120 Glutamine synthetase, catalytic domain HYG85_05080 PF12437 Glutamine synthetase type III N terminal HYG85_05090 PF03951 Glutamine synthetase, beta-Grasp domain HYG85_05090 PF00120 Glutamine synthetase, catalytic domain HYG85_05095 PF02803 Thiolase, C-terminal domain HYG85_05095 PF00108 Thiolase, N-terminal domain HYG85_05100 PF01144 Coenzyme A transferase HYG85_05105 PF01144 Coenzyme A transferase HYG85_05110 PF01116 Fructose-bisphosphate aldolase class-II HYG85_05115 PF00294 pfkB family carbohydrate kinase HYG85_05120 PF02653 Branched-chain amino acid transport system / permease component HYG85_05125 PF00005 ABC transporter HYG85_05130 PF13407 Periplasmic binding protein domain HYG85_05135 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HYG85_05135 PF00205 Thiamine pyrophosphate enzyme, central domain HYG85_05135 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HYG85_05140 PF01261 Xylose isomerase-like TIM barrel HYG85_05150 PF01261 Xylose isomerase-like TIM barrel HYG85_05155 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HYG85_05155 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HYG85_05160 PF08220 DeoR-like helix-turn-helix domain HYG85_05160 PF00455 DeoR C terminal sensor domain HYG85_05165 PF01546 Peptidase family M20/M25/M40 HYG85_05175 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_05180 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_05190 PF06580 Histidine kinase HYG85_05195 PF00072 Response regulator receiver domain HYG85_05195 PF12833 Helix-turn-helix domain HYG85_05200 PF10114 Sensory domain found in PocR HYG85_05200 PF12833 Helix-turn-helix domain HYG85_05205 PF02607 B12 binding domain HYG85_05205 PF02310 B12 binding domain HYG85_05210 PF02310 B12 binding domain HYG85_05210 PF02607 B12 binding domain HYG85_05225 PF02492 CobW/HypB/UreG, nucleotide-binding domain HYG85_05225 PF07683 Cobalamin synthesis protein cobW C-terminal domain HYG85_05245 PF00155 Aminotransferase class I and II HYG85_05250 PF01678 Diaminopimelate epimerase HYG85_05255 PF00578 AhpC/TSA family HYG85_05265 PF00912 Transglycosylase HYG85_05265 PF00905 Penicillin binding protein transpeptidase domain HYG85_05270 PF00912 Transglycosylase HYG85_05270 PF00905 Penicillin binding protein transpeptidase domain HYG85_05275 PF03862 SpoVAC/SpoVAEB sporulation membrane protein HYG85_05280 PF07451 Stage V sporulation protein AD (SpoVAD) HYG85_05285 PF03862 SpoVAC/SpoVAEB sporulation membrane protein HYG85_05295 PF12164 Stage V sporulation protein AA HYG85_05305 PF04542 Sigma-70 region 2 HYG85_05305 PF04539 Sigma-70 region 3 HYG85_05305 PF04545 Sigma-70, region 4 HYG85_05310 PF13581 Histidine kinase-like ATPase domain HYG85_05315 PF01740 STAS domain HYG85_05330 PF02875 Mur ligase family, glutamate ligase domain HYG85_05330 PF08245 Mur ligase middle domain HYG85_05335 PF01381 Helix-turn-helix HYG85_05345 PF10458 Valyl tRNA synthetase tRNA binding arm HYG85_05345 PF00133 tRNA synthetases class I (I, L, M and V) HYG85_05345 PF08264 Anticodon-binding domain of tRNA HYG85_05365 PF03323 Bacillus/Clostridium GerA spore germination protein HYG85_05370 PF03845 Spore germination protein HYG85_05375 PF00155 Aminotransferase class I and II HYG85_05380 PF01791 DeoC/LacD family aldolase HYG85_05390 PF02056 Family 4 glycosyl hydrolase HYG85_05390 PF11975 Family 4 glycosyl hydrolase C-terminal domain HYG85_05395 PF12833 Helix-turn-helix domain HYG85_05405 PF00156 Phosphoribosyl transferase domain HYG85_05410 PF01180 Dihydroorotate dehydrogenase HYG85_05415 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B HYG85_05420 PF02142 MGS-like domain HYG85_05420 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain HYG85_05420 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HYG85_05425 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain HYG85_05425 PF00117 Glutamine amidotransferase class-I HYG85_05430 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family HYG85_05435 PF01979 Amidohydrolase family HYG85_05440 PF00571 CBS domain HYG85_05455 PF00999 Sodium/hydrogen exchanger family HYG85_05460 PF03462 PCRF domain HYG85_05460 PF00472 RF-1 domain HYG85_05465 PF05175 Methyltransferase small domain HYG85_05465 PF17827 PrmC N-terminal domain HYG85_05470 PF07136 Protein of unknown function (DUF1385) HYG85_05475 PF01197 Ribosomal protein L31 HYG85_05480 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HYG85_05480 PF07498 Rho termination factor, N-terminal domain HYG85_05480 PF07497 Rho termination factor, RNA-binding domain HYG85_05485 PF01116 Fructose-bisphosphate aldolase class-II HYG85_05490 PF00571 CBS domain HYG85_05490 PF01769 Divalent cation transporter HYG85_05490 PF03448 MgtE intracellular N domain HYG85_05510 PF02645 Uncharacterised protein, DegV family COG1307 HYG85_05540 PF00005 ABC transporter HYG85_05545 PF03601 Conserved hypothetical protein 698 HYG85_05550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HYG85_05550 PF03466 LysR substrate binding domain HYG85_05565 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family HYG85_05585 PF00664 ABC transporter transmembrane region HYG85_05585 PF00005 ABC transporter HYG85_05590 PF00664 ABC transporter transmembrane region HYG85_05590 PF00005 ABC transporter HYG85_05600 PF08242 Methyltransferase domain HYG85_05600 PF14765 Polyketide synthase dehydratase HYG85_05600 PF00550 Phosphopantetheine attachment site HYG85_05600 PF08659 KR domain HYG85_05600 PF00109 Beta-ketoacyl synthase, N-terminal domain HYG85_05600 PF16197 Ketoacyl-synthetase C-terminal extension HYG85_05600 PF02801 Beta-ketoacyl synthase, C-terminal domain HYG85_05605 PF00202 Aminotransferase class-III HYG85_05605 PF00501 AMP-binding enzyme HYG85_05605 PF13193 AMP-binding enzyme C-terminal domain HYG85_05605 PF00668 Condensation domain HYG85_05605 PF16197 Ketoacyl-synthetase C-terminal extension HYG85_05605 PF00109 Beta-ketoacyl synthase, N-terminal domain HYG85_05605 PF02801 Beta-ketoacyl synthase, C-terminal domain HYG85_05605 PF00550 Phosphopantetheine attachment site HYG85_05615 PF00698 Acyl transferase domain HYG85_05630 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HYG85_05630 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HYG85_05635 PF16861 Carbamoyltransferase C-terminus HYG85_05635 PF02543 Carbamoyltransferase N-terminus HYG85_05640 PF16861 Carbamoyltransferase C-terminus HYG85_05640 PF02543 Carbamoyltransferase N-terminus HYG85_05645 PF16861 Carbamoyltransferase C-terminus HYG85_05645 PF02543 Carbamoyltransferase N-terminus HYG85_05650 PF01012 Electron transfer flavoprotein domain HYG85_05650 PF00766 Electron transfer flavoprotein FAD-binding domain HYG85_05650 PF13237 4Fe-4S dicluster domain HYG85_05655 PF01012 Electron transfer flavoprotein domain HYG85_05660 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HYG85_05660 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HYG85_05660 PF02770 Acyl-CoA dehydrogenase, middle domain HYG85_05670 PF10127 RNA repair pathway DNA polymerase beta family HYG85_05695 PF00196 Bacterial regulatory proteins, luxR family HYG85_05695 PF00072 Response regulator receiver domain HYG85_05715 PF13411 MerR HTH family regulatory protein HYG85_05720 PF00465 Iron-containing alcohol dehydrogenase HYG85_05730 PF00005 ABC transporter HYG85_05745 PF01327 Polypeptide deformylase HYG85_05750 PF16197 Ketoacyl-synthetase C-terminal extension HYG85_05750 PF08659 KR domain HYG85_05750 PF00550 Phosphopantetheine attachment site HYG85_05750 PF00109 Beta-ketoacyl synthase, N-terminal domain HYG85_05750 PF02801 Beta-ketoacyl synthase, C-terminal domain HYG85_05750 PF14765 Polyketide synthase dehydratase HYG85_05755 PF16197 Ketoacyl-synthetase C-terminal extension HYG85_05755 PF02801 Beta-ketoacyl synthase, C-terminal domain HYG85_05755 PF08242 Methyltransferase domain HYG85_05755 PF00550 Phosphopantetheine attachment site HYG85_05755 PF14765 Polyketide synthase dehydratase HYG85_05755 PF00109 Beta-ketoacyl synthase, N-terminal domain HYG85_05755 PF08659 KR domain HYG85_05760 PF00378 Enoyl-CoA hydratase/isomerase HYG85_05765 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal HYG85_05765 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal HYG85_05770 PF00109 Beta-ketoacyl synthase, N-terminal domain HYG85_05770 PF02801 Beta-ketoacyl synthase, C-terminal domain HYG85_05775 PF00550 Phosphopantetheine attachment site HYG85_05780 PF00550 Phosphopantetheine attachment site HYG85_05780 PF08242 Methyltransferase domain HYG85_05780 PF08659 KR domain HYG85_05780 PF02801 Beta-ketoacyl synthase, C-terminal domain HYG85_05780 PF00109 Beta-ketoacyl synthase, N-terminal domain HYG85_05780 PF16197 Ketoacyl-synthetase C-terminal extension HYG85_05780 PF14765 Polyketide synthase dehydratase HYG85_05785 PF01209 ubiE/COQ5 methyltransferase family HYG85_05795 PF03060 Nitronate monooxygenase HYG85_05795 PF00698 Acyl transferase domain HYG85_05810 PF00698 Acyl transferase domain HYG85_05815 PF00753 Metallo-beta-lactamase superfamily HYG85_05820 PF17848 Acetyl-coA carboxylase zinc finger domain HYG85_05820 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit HYG85_05825 PF17848 Acetyl-coA carboxylase zinc finger domain HYG85_05825 PF01039 Carboxyl transferase domain HYG85_05830 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HYG85_05830 PF02785 Biotin carboxylase C-terminal domain HYG85_05830 PF00289 Biotin carboxylase, N-terminal domain HYG85_05835 PF00364 Biotin-requiring enzyme HYG85_05840 PF12146 Serine aminopeptidase, S33 HYG85_05845 PF00989 PAS fold HYG85_05845 PF16736 Single Cache-like HYG85_05845 PF00512 His Kinase A (phospho-acceptor) domain HYG85_05845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYG85_05850 PF00486 Transcriptional regulatory protein, C terminal HYG85_05850 PF00072 Response regulator receiver domain HYG85_05860 PF08361 MAATS-type transcriptional repressor, C-terminal region HYG85_05860 PF00440 Bacterial regulatory proteins, tetR family HYG85_05865 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HYG85_05865 PF07992 Pyridine nucleotide-disulphide oxidoreductase HYG85_05885 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HYG85_05885 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HYG85_05895 PF04309 Glycerol-3-phosphate responsive antiterminator HYG85_05925 PF02567 Phenazine biosynthesis-like protein HYG85_05960 PF03422 Carbohydrate binding module (family 6) HYG85_05960 PF00457 Glycosyl hydrolases family 11 HYG85_05960 PF01522 Polysaccharide deacetylase HYG85_05985 PF12850 Calcineurin-like phosphoesterase superfamily domain HYG85_06010 PF17676 LD-carboxypeptidase C-terminal domain HYG85_06010 PF02016 LD-carboxypeptidase N-terminal domain HYG85_06060 PF00149 Calcineurin-like phosphoesterase HYG85_06085 PF05569 BlaR1 peptidase M56 HYG85_06085 PF00905 Penicillin binding protein transpeptidase domain HYG85_06105 PF00491 Arginase family HYG85_06120 PF06445 GyrI-like small molecule binding domain HYG85_06120 PF12833 Helix-turn-helix domain HYG85_06130 PF00962 Adenosine/AMP deaminase HYG85_06150 PF03848 Tellurite resistance protein TehB HYG85_06155 PF12833 Helix-turn-helix domain HYG85_06155 PF06445 GyrI-like small molecule binding domain HYG85_06200 PF00583 Acetyltransferase (GNAT) family HYG85_06220 PF13302 Acetyltransferase (GNAT) domain HYG85_06335 PF01548 Transposase HYG85_06335 PF02371 Transposase IS116/IS110/IS902 family HYG85_06375 PF00719 Inorganic pyrophosphatase HYG85_06395 PF00293 NUDIX domain HYG85_06400 PF00300 Histidine phosphatase superfamily (branch 1) HYG85_06405 PF01842 ACT domain HYG85_06405 PF00800 Prephenate dehydratase HYG85_06405 PF01817 Chorismate mutase type II HYG85_06425 PF13495 Phage integrase, N-terminal SAM-like domain HYG85_06425 PF00589 Phage integrase family HYG85_06440 PF03786 D-mannonate dehydratase (UxuA) HYG85_06455 PF01321 Creatinase/Prolidase N-terminal domain HYG85_06455 PF00557 Metallopeptidase family M24 HYG85_06460 PF03737 Aldolase/RraA HYG85_06465 PF02653 Branched-chain amino acid transport system / permease component HYG85_06470 PF00005 ABC transporter HYG85_06480 PF00356 Bacterial regulatory proteins, lacI family HYG85_06495 PF00672 HAMP domain HYG85_06495 PF02743 Cache domain HYG85_06495 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HYG85_06505 PF01740 STAS domain HYG85_06505 PF00916 Sulfate permease family HYG85_06515 PF01966 HD domain HYG85_06520 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HYG85_06520 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HYG85_06525 PF01022 Bacterial regulatory protein, arsR family HYG85_06530 PF13630 SdpI/YhfL protein family HYG85_06530 PF07853 Protein of unknown function (DUF1648) HYG85_06540 PF16199 Radical_SAM C-terminal domain HYG85_06540 PF04055 Radical SAM superfamily HYG85_06550 PF01926 50S ribosome-binding GTPase HYG85_06555 PF00004 ATPase family associated with various cellular activities (AAA) HYG85_06555 PF05362 Lon protease (S16) C-terminal proteolytic domain HYG85_06555 PF02190 ATP-dependent protease La (LON) substrate-binding domain HYG85_06560 PF07724 AAA domain (Cdc48 subfamily) HYG85_06560 PF10431 C-terminal, D2-small domain, of ClpB protein HYG85_06560 PF06689 ClpX C4-type zinc finger HYG85_06565 PF00574 Clp protease HYG85_06570 PF05697 Bacterial trigger factor protein (TF) HYG85_06570 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HYG85_06570 PF05698 Bacterial trigger factor protein (TF) C-terminus HYG85_06575 PF00269 Small, acid-soluble spore proteins, alpha/beta type HYG85_06585 PF00005 ABC transporter HYG85_06585 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HYG85_06590 PF00005 ABC transporter HYG85_06590 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HYG85_06595 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_06595 PF12911 N-terminal TM domain of oligopeptide transport permease C HYG85_06600 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_06605 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HYG85_06660 PF01725 Ham1 family HYG85_06665 PF03725 3' exoribonuclease family, domain 2 HYG85_06665 PF01138 3' exoribonuclease family, domain 1 HYG85_06675 PF00395 S-layer homology domain HYG85_06675 PF01520 N-acetylmuramoyl-L-alanine amidase HYG85_06705 PF01170 Putative RNA methylase family UPF0020 HYG85_06705 PF02926 THUMP domain HYG85_06715 PF12850 Calcineurin-like phosphoesterase superfamily domain HYG85_06725 PF00480 ROK family HYG85_06735 PF01263 Aldose 1-epimerase HYG85_06740 PF13367 PrsW family intramembrane metalloprotease HYG85_06750 PF03951 Glutamine synthetase, beta-Grasp domain HYG85_06750 PF00120 Glutamine synthetase, catalytic domain HYG85_06780 PF03319 Ethanolamine utilisation protein EutN/carboxysome HYG85_06785 PF06130 Phosphate propanoyltransferase HYG85_06790 PF00936 BMC domain HYG85_06795 PF00936 BMC domain HYG85_06795 PF16365 Ethanolamine utilization protein EutK C-terminus HYG85_06800 PF00936 BMC domain HYG85_06805 PF00936 BMC domain HYG85_06805 PF16365 Ethanolamine utilization protein EutK C-terminus HYG85_06810 PF08240 Alcohol dehydrogenase GroES-like domain HYG85_06810 PF00107 Zinc-binding dehydrogenase HYG85_06815 PF00171 Aldehyde dehydrogenase family HYG85_06820 PF03928 Haem-degrading HYG85_06830 PF08841 Diol dehydratase reactivase ATPase-like domain HYG85_06830 PF18427 DD-reactivating factor swiveling domain HYG85_06840 PF02288 Dehydratase medium subunit HYG85_06845 PF02286 Dehydratase large subunit HYG85_06855 PF00455 DeoR C terminal sensor domain HYG85_06855 PF08220 DeoR-like helix-turn-helix domain HYG85_06865 PF08453 Peptidase family M9 N-terminal HYG85_06865 PF18496 Collagenase G catalytic helper subdomain HYG85_06865 PF01752 Collagenase HYG85_06870 PF09587 Bacterial capsule synthesis protein PGA_cap HYG85_06875 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HYG85_06895 PF01301 Glycosyl hydrolases family 35 HYG85_06900 PF12833 Helix-turn-helix domain HYG85_06925 PF02311 AraC-like ligand binding domain HYG85_06925 PF12833 Helix-turn-helix domain HYG85_06930 PF17862 AAA+ lid domain HYG85_06930 PF06480 FtsH Extracellular HYG85_06930 PF00004 ATPase family associated with various cellular activities (AAA) HYG85_06930 PF01434 Peptidase family M41 HYG85_06935 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HYG85_06935 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HYG85_06940 PF00356 Bacterial regulatory proteins, lacI family HYG85_06945 PF00703 Glycosyl hydrolases family 2 HYG85_06945 PF02836 Glycosyl hydrolases family 2, TIM barrel domain HYG85_06945 PF02837 Glycosyl hydrolases family 2, sugar binding domain HYG85_06945 PF16355 Domain of unknown function (DUF4982) HYG85_06955 PF12010 Domain of unknown function (DUF3502) HYG85_06960 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_06965 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_06970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYG85_06970 PF06580 Histidine kinase HYG85_06970 PF00672 HAMP domain HYG85_06970 PF02743 Cache domain HYG85_06975 PF12833 Helix-turn-helix domain HYG85_06975 PF00072 Response regulator receiver domain HYG85_06985 PF04616 Glycosyl hydrolases family 43 HYG85_06985 PF03422 Carbohydrate binding module (family 6) HYG85_07000 PF00005 ABC transporter HYG85_07000 PF00571 CBS domain HYG85_07005 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_07015 PF12833 Helix-turn-helix domain HYG85_07020 PF07470 Glycosyl Hydrolase Family 88 HYG85_07040 PF00005 ABC transporter HYG85_07040 PF13732 Domain of unknown function (DUF4162) HYG85_07050 PF04542 Sigma-70 region 2 HYG85_07050 PF08281 Sigma-70, region 4 HYG85_07055 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) HYG85_07070 PF07882 L-fucose isomerase, second N-terminal domain HYG85_07070 PF07881 L-fucose isomerase, first N-terminal domain HYG85_07070 PF02952 L-fucose isomerase, C-terminal domain HYG85_07080 PF03313 Serine dehydratase alpha chain HYG85_07085 PF03313 Serine dehydratase alpha chain HYG85_07090 PF04552 Sigma-54, DNA binding domain HYG85_07090 PF00309 Sigma-54 factor, Activator interacting domain (AID) HYG85_07090 PF04963 Sigma-54 factor, core binding domain HYG85_07095 PF01042 Endoribonuclease L-PSP HYG85_07100 PF00375 Sodium:dicarboxylate symporter family HYG85_07105 PF00155 Aminotransferase class I and II HYG85_07110 PF00158 Sigma-54 interaction domain HYG85_07110 PF13426 PAS domain HYG85_07110 PF02954 Bacterial regulatory protein, Fis family HYG85_07115 PF13472 GDSL-like Lipase/Acylhydrolase family HYG85_07120 PF03063 Prismane/CO dehydrogenase family HYG85_07130 PF01321 Creatinase/Prolidase N-terminal domain HYG85_07130 PF00557 Metallopeptidase family M24 HYG85_07140 PF00245 Alkaline phosphatase HYG85_07145 PF05147 Lanthionine synthetase C-like protein HYG85_07150 PF00005 ABC transporter HYG85_07155 PF14028 Lantibiotic biosynthesis dehydratase C-term HYG85_07155 PF04738 Lantibiotic dehydratase, N terminus HYG85_07165 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase HYG85_07170 PF01979 Amidohydrolase family HYG85_07175 PF13580 SIS domain HYG85_07200 PF01047 MarR family HYG85_07200 PF00480 ROK family HYG85_07210 PF01844 HNH endonuclease HYG85_07225 PF01381 Helix-turn-helix HYG85_07280 PF01915 Glycosyl hydrolase family 3 C-terminal domain HYG85_07280 PF00933 Glycosyl hydrolase family 3 N terminal domain HYG85_07285 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HYG85_07285 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HYG85_07285 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HYG85_07285 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HYG85_07290 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_07295 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_07305 PF00072 Response regulator receiver domain HYG85_07305 PF12833 Helix-turn-helix domain HYG85_07310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYG85_07310 PF06580 Histidine kinase HYG85_07310 PF02743 Cache domain HYG85_07310 PF00672 HAMP domain HYG85_07315 PF01791 DeoC/LacD family aldolase HYG85_07320 PF13407 Periplasmic binding protein domain HYG85_07325 PF02653 Branched-chain amino acid transport system / permease component HYG85_07330 PF00005 ABC transporter HYG85_07335 PF05025 RbsD / FucU transport protein family HYG85_07340 PF00294 pfkB family carbohydrate kinase HYG85_07345 PF00356 Bacterial regulatory proteins, lacI family HYG85_07360 PF00171 Aldehyde dehydrogenase family HYG85_07365 PF01553 Acyltransferase HYG85_07375 PF00005 ABC transporter HYG85_07380 PF01797 Transposase IS200 like HYG85_07400 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HYG85_07400 PF00672 HAMP domain HYG85_07400 PF05227 CHASE3 domain HYG85_07410 PF01497 Periplasmic binding protein HYG85_07410 PF12833 Helix-turn-helix domain HYG85_07415 PF12833 Helix-turn-helix domain HYG85_07415 PF01497 Periplasmic binding protein HYG85_07435 PF01266 FAD dependent oxidoreductase HYG85_07445 PF00005 ABC transporter HYG85_07450 PF04397 LytTr DNA-binding domain HYG85_07450 PF00072 Response regulator receiver domain HYG85_07480 PF01139 tRNA-splicing ligase RtcB HYG85_07490 PF18080 Galactose mutarotase-like fold domain HYG85_07490 PF17974 Galactose-binding domain-like HYG85_07490 PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase HYG85_07490 PF08305 NPCBM/NEW2 domain HYG85_07490 PF12905 Endo-alpha-N-acetylgalactosaminidase HYG85_07490 PF17451 Glycosyl hydrolase 101 beta sandwich domain HYG85_07495 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_07500 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_07505 PF01547 Bacterial extracellular solute-binding protein HYG85_07510 PF12833 Helix-turn-helix domain HYG85_07510 PF17853 GGDEF-like domain HYG85_07515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYG85_07515 PF00672 HAMP domain HYG85_07515 PF02743 Cache domain HYG85_07515 PF06580 Histidine kinase HYG85_07520 PF00041 Fibronectin type III domain HYG85_07520 PF00704 Glycosyl hydrolases family 18 HYG85_07530 PF01235 Sodium:alanine symporter family HYG85_07550 PF00561 alpha/beta hydrolase fold HYG85_07580 PF00072 Response regulator receiver domain HYG85_07580 PF00486 Transcriptional regulatory protein, C terminal HYG85_07585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYG85_07590 PF00005 ABC transporter HYG85_07675 PF00128 Alpha amylase, catalytic domain HYG85_07680 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_07685 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_07695 PF00534 Glycosyl transferases group 1 HYG85_07700 PF00356 Bacterial regulatory proteins, lacI family HYG85_07705 PF00963 Cohesin domain HYG85_07705 PF00395 S-layer homology domain HYG85_07710 PF00512 His Kinase A (phospho-acceptor) domain HYG85_07710 PF16736 Single Cache-like HYG85_07710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYG85_07710 PF00989 PAS fold HYG85_07715 PF00072 Response regulator receiver domain HYG85_07715 PF00486 Transcriptional regulatory protein, C terminal HYG85_07735 PF05139 Erythromycin esterase HYG85_07740 PF01554 MatE HYG85_07790 PF00668 Condensation domain HYG85_07790 PF00550 Phosphopantetheine attachment site HYG85_07790 PF00975 Thioesterase domain HYG85_07790 PF13193 AMP-binding enzyme C-terminal domain HYG85_07790 PF00501 AMP-binding enzyme HYG85_07795 PF18563 TubC N-terminal docking domain HYG85_07795 PF00550 Phosphopantetheine attachment site HYG85_07795 PF00668 Condensation domain HYG85_07795 PF13193 AMP-binding enzyme C-terminal domain HYG85_07795 PF00501 AMP-binding enzyme HYG85_07800 PF02384 N-6 DNA Methylase HYG85_07815 PF00183 Hsp90 protein HYG85_07820 PF01380 SIS domain HYG85_07825 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HYG85_07825 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HYG85_07825 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HYG85_07825 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HYG85_07835 PF02457 DisA bacterial checkpoint controller nucleotide-binding HYG85_07855 PF00152 tRNA synthetases class II (D, K and N) HYG85_07855 PF01336 OB-fold nucleic acid binding domain HYG85_07860 PF01272 Transcription elongation factor, GreA/GreB, C-term HYG85_07860 PF03449 Transcription elongation factor, N-terminal HYG85_07875 PF01207 Dihydrouridine synthase (Dus) HYG85_07880 PF03309 Type III pantothenate kinase HYG85_07900 PF02237 Biotin protein ligase C terminal domain HYG85_07900 PF03099 Biotin/lipoate A/B protein ligase family HYG85_07900 PF08279 HTH domain HYG85_07905 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HYG85_07905 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HYG85_07925 PF00440 Bacterial regulatory proteins, tetR family HYG85_07925 PF17925 Tetracyclin repressor-like, C-terminal domain HYG85_07930 PF01554 MatE HYG85_07935 PF00005 ABC transporter HYG85_07945 PF02503 Polyphosphate kinase middle domain HYG85_07945 PF13090 Polyphosphate kinase C-terminal domain 2 HYG85_07945 PF17941 Polyphosphate kinase C-terminal domain 1 HYG85_07945 PF13089 Polyphosphate kinase N-terminal domain HYG85_07950 PF00072 Response regulator receiver domain HYG85_07970 PF01522 Polysaccharide deacetylase HYG85_07975 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase HYG85_07975 PF04101 Glycosyltransferase family 28 C-terminal domain HYG85_07980 PF00534 Glycosyl transferases group 1 HYG85_07980 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase HYG85_07985 PF00884 Sulfatase HYG85_07990 PF01145 SPFH domain / Band 7 family HYG85_08005 PF00258 Flavodoxin HYG85_08015 PF00588 SpoU rRNA Methylase family HYG85_08015 PF08032 RNA 2'-O ribose methyltransferase substrate binding HYG85_08020 PF02254 TrkA-N domain HYG85_08020 PF02080 TrkA-C domain HYG85_08025 PF02386 Cation transport protein HYG85_08030 PF00753 Metallo-beta-lactamase superfamily HYG85_08030 PF00258 Flavodoxin HYG85_08040 PF07702 UTRA domain HYG85_08040 PF00392 Bacterial regulatory proteins, gntR family HYG85_08045 PF00005 ABC transporter HYG85_08055 PF10518 TAT (twin-arginine translocation) pathway signal sequence HYG85_08055 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HYG85_08060 PF01261 Xylose isomerase-like TIM barrel HYG85_08065 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HYG85_08065 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HYG85_08070 PF00356 Bacterial regulatory proteins, lacI family HYG85_08075 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_08080 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_08095 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_08100 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_08115 PF12833 Helix-turn-helix domain HYG85_08115 PF02311 AraC-like ligand binding domain HYG85_08135 PF00365 Phosphofructokinase HYG85_08140 PF07733 Bacterial DNA polymerase III alpha NTPase domain HYG85_08140 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HYG85_08140 PF14579 Helix-hairpin-helix motif HYG85_08140 PF02811 PHP domain HYG85_08140 PF01336 OB-fold nucleic acid binding domain HYG85_08145 PF02743 Cache domain HYG85_08145 PF00672 HAMP domain HYG85_08145 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HYG85_08150 PF02954 Bacterial regulatory protein, Fis family HYG85_08150 PF00072 Response regulator receiver domain HYG85_08150 PF00158 Sigma-54 interaction domain HYG85_08155 PF02734 DAK2 domain HYG85_08160 PF02733 Dak1 domain HYG85_08170 PF00005 ABC transporter HYG85_08175 PF12399 Branched-chain amino acid ATP-binding cassette transporter HYG85_08175 PF00005 ABC transporter HYG85_08180 PF11862 Domain of unknown function (DUF3382) HYG85_08180 PF02653 Branched-chain amino acid transport system / permease component HYG85_08185 PF02653 Branched-chain amino acid transport system / permease component HYG85_08195 PF03313 Serine dehydratase alpha chain HYG85_08200 PF00128 Alpha amylase, catalytic domain HYG85_08205 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_08210 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_08220 PF12833 Helix-turn-helix domain HYG85_08225 PF02743 Cache domain HYG85_08225 PF00672 HAMP domain HYG85_08225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYG85_08225 PF06580 Histidine kinase HYG85_08235 PF00480 ROK family HYG85_08240 PF00480 ROK family HYG85_08250 PF07883 Cupin domain HYG85_08260 PF00380 Ribosomal protein S9/S16 HYG85_08265 PF00572 Ribosomal protein L13 HYG85_08275 PF01416 tRNA pseudouridine synthase HYG85_08280 PF02361 Cobalt transport protein HYG85_08285 PF00005 ABC transporter HYG85_08290 PF00005 ABC transporter HYG85_08295 PF01196 Ribosomal protein L17 HYG85_08300 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain HYG85_08300 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain HYG85_08300 PF01000 RNA polymerase Rpb3/RpoA insert domain HYG85_08305 PF00163 Ribosomal protein S4/S9 N-terminal domain HYG85_08305 PF01479 S4 domain HYG85_08310 PF00411 Ribosomal protein S11 HYG85_08315 PF00416 Ribosomal protein S13/S18 HYG85_08320 PF00444 Ribosomal protein L36 HYG85_08325 PF01176 Translation initiation factor 1A / IF-1 HYG85_08335 PF00557 Metallopeptidase family M24 HYG85_08340 PF05191 Adenylate kinase, active site lid HYG85_08345 PF00344 SecY translocase HYG85_08350 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A HYG85_08355 PF00327 Ribosomal protein L30p/L7e HYG85_08360 PF00333 Ribosomal protein S5, N-terminal domain HYG85_08360 PF03719 Ribosomal protein S5, C-terminal domain HYG85_08365 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast HYG85_08370 PF00347 Ribosomal protein L6 HYG85_08375 PF00410 Ribosomal protein S8 HYG85_08380 PF00253 Ribosomal protein S14p/S29e HYG85_08385 PF00281 Ribosomal protein L5 HYG85_08385 PF00673 ribosomal L5P family C-terminus HYG85_08390 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 HYG85_08390 PF00467 KOW motif HYG85_08395 PF00238 Ribosomal protein L14p/L23e HYG85_08400 PF00366 Ribosomal protein S17 HYG85_08405 PF00831 Ribosomal L29 protein HYG85_08410 PF00252 Ribosomal protein L16p/L10e HYG85_08415 PF07650 KH domain HYG85_08415 PF00189 Ribosomal protein S3, C-terminal domain HYG85_08420 PF00237 Ribosomal protein L22p/L17e HYG85_08425 PF00203 Ribosomal protein S19 HYG85_08430 PF03947 Ribosomal Proteins L2, C-terminal domain HYG85_08430 PF00181 Ribosomal Proteins L2, RNA binding domain HYG85_08435 PF00276 Ribosomal protein L23 HYG85_08440 PF00573 Ribosomal protein L4/L1 family HYG85_08445 PF00297 Ribosomal protein L3 HYG85_08450 PF00338 Ribosomal protein S10p/S20e HYG85_08455 PF12833 Helix-turn-helix domain HYG85_08455 PF06445 GyrI-like small molecule binding domain HYG85_08460 PF00009 Elongation factor Tu GTP binding domain HYG85_08460 PF03144 Elongation factor Tu domain 2 HYG85_08460 PF03143 Elongation factor Tu C-terminal domain HYG85_08465 PF00679 Elongation factor G C-terminus HYG85_08465 PF14492 Elongation Factor G, domain II HYG85_08465 PF00009 Elongation factor Tu GTP binding domain HYG85_08465 PF03144 Elongation factor Tu domain 2 HYG85_08465 PF03764 Elongation factor G, domain IV HYG85_08470 PF00177 Ribosomal protein S7p/S5e HYG85_08475 PF00164 Ribosomal protein S12/S23 HYG85_08480 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family HYG85_08485 PF04998 RNA polymerase Rpb1, domain 5 HYG85_08485 PF04997 RNA polymerase Rpb1, domain 1 HYG85_08485 PF04983 RNA polymerase Rpb1, domain 3 HYG85_08485 PF00623 RNA polymerase Rpb1, domain 2 HYG85_08485 PF05000 RNA polymerase Rpb1, domain 4 HYG85_08490 PF04563 RNA polymerase beta subunit HYG85_08490 PF04565 RNA polymerase Rpb2, domain 3 HYG85_08490 PF10385 RNA polymerase beta subunit external 1 domain HYG85_08490 PF00562 RNA polymerase Rpb2, domain 6 HYG85_08490 PF04560 RNA polymerase Rpb2, domain 7 HYG85_08490 PF04561 RNA polymerase Rpb2, domain 2 HYG85_08495 PF00542 Ribosomal protein L7/L12 C-terminal domain HYG85_08495 PF16320 Ribosomal protein L7/L12 dimerisation domain HYG85_08500 PF00466 Ribosomal protein L10 HYG85_08505 PF00687 Ribosomal protein L1p/L10e family HYG85_08510 PF03946 Ribosomal protein L11, N-terminal domain HYG85_08510 PF00298 Ribosomal protein L11, RNA binding domain HYG85_08515 PF00467 KOW motif HYG85_08515 PF02357 Transcription termination factor nusG HYG85_08525 PF00471 Ribosomal protein L33 HYG85_08540 PF02561 Flagellar protein FliS HYG85_08545 PF07196 Flagellin hook IN motif HYG85_08545 PF07195 Flagellar hook-associated protein 2 C-terminus HYG85_08545 PF02465 Flagellar hook-associated protein 2 N-terminus HYG85_08555 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family HYG85_08560 PF16363 GDP-mannose 4,6 dehydratase HYG85_08565 PF00535 Glycosyl transferase family 2 HYG85_08575 PF06463 Molybdenum Cofactor Synthesis C HYG85_08575 PF04055 Radical SAM superfamily HYG85_08585 PF16363 GDP-mannose 4,6 dehydratase HYG85_08595 PF13419 Haloacid dehalogenase-like hydrolase HYG85_08600 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HYG85_08600 PF00205 Thiamine pyrophosphate enzyme, central domain HYG85_08600 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HYG85_08610 PF00483 Nucleotidyl transferase HYG85_08615 PF00535 Glycosyl transferase family 2 HYG85_08615 PF13181 Tetratricopeptide repeat HYG85_08620 PF00669 Bacterial flagellin N-terminal helical region HYG85_08620 PF00700 Bacterial flagellin C-terminal helical region HYG85_08625 PF00700 Bacterial flagellin C-terminal helical region HYG85_08625 PF00669 Bacterial flagellin N-terminal helical region HYG85_08630 PF02599 Global regulator protein family HYG85_08635 PF02623 FliW protein HYG85_08640 PF00669 Bacterial flagellin N-terminal helical region HYG85_08640 PF00700 Bacterial flagellin C-terminal helical region HYG85_08650 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HYG85_08650 PF00460 Flagella basal body rod protein HYG85_08670 PF00156 Phosphoribosyl transferase domain HYG85_08675 PF14490 Helix-hairpin-helix containing domain HYG85_08675 PF13538 UvrD-like helicase C-terminal domain HYG85_08675 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain HYG85_08680 PF00381 PTS HPr component phosphorylation site HYG85_08685 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HYG85_08685 PF00367 phosphotransferase system, EIIB HYG85_08685 PF02378 Phosphotransferase system, EIIC HYG85_08690 PF02378 Phosphotransferase system, EIIC HYG85_08690 PF00367 phosphotransferase system, EIIB HYG85_08690 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HYG85_08695 PF02378 Phosphotransferase system, EIIC HYG85_08695 PF00367 phosphotransferase system, EIIB HYG85_08695 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HYG85_08700 PF03123 CAT RNA binding domain HYG85_08700 PF00874 PRD domain HYG85_08705 PF00391 PEP-utilising enzyme, mobile domain HYG85_08705 PF05524 PEP-utilising enzyme, N-terminal HYG85_08705 PF02896 PEP-utilising enzyme, TIM barrel domain HYG85_08710 PF00381 PTS HPr component phosphorylation site HYG85_08715 PF00438 S-adenosylmethionine synthetase, N-terminal domain HYG85_08715 PF02772 S-adenosylmethionine synthetase, central domain HYG85_08715 PF02773 S-adenosylmethionine synthetase, C-terminal domain HYG85_08735 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HYG85_08735 PF00460 Flagella basal body rod protein HYG85_08740 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HYG85_08740 PF00460 Flagella basal body rod protein HYG85_08750 PF12116 Stage III sporulation protein D HYG85_08755 PF02424 ApbE family HYG85_08765 PF08486 Stage II sporulation protein HYG85_08775 PF00343 Carbohydrate phosphorylase HYG85_08780 PF08264 Anticodon-binding domain of tRNA HYG85_08780 PF00133 tRNA synthetases class I (I, L, M and V) HYG85_08795 PF00209 Sodium:neurotransmitter symporter family HYG85_08800 PF01212 Beta-eliminating lyase HYG85_08805 PF01042 Endoribonuclease L-PSP HYG85_08815 PF04463 Protein of unknown function (DUF523) HYG85_08820 PF00557 Metallopeptidase family M24 HYG85_08825 PF01381 Helix-turn-helix HYG85_08830 PF05190 MutS family domain IV HYG85_08830 PF05188 MutS domain II HYG85_08830 PF01624 MutS domain I HYG85_08830 PF05192 MutS domain III HYG85_08830 PF00488 MutS domain V HYG85_08835 PF01055 Glycosyl hydrolases family 31 HYG85_08835 PF13802 Galactose mutarotase-like HYG85_08840 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_08845 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_08855 PF02743 Cache domain HYG85_08855 PF00672 HAMP domain HYG85_08855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYG85_08855 PF06580 Histidine kinase HYG85_08860 PF00072 Response regulator receiver domain HYG85_08860 PF12833 Helix-turn-helix domain HYG85_08860 PF00072 Response regulator receiver domain HYG85_08860 PF12833 Helix-turn-helix domain HYG85_08865 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family HYG85_08865 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain HYG85_08865 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain HYG85_08870 PF02446 4-alpha-glucanotransferase HYG85_08875 PF01553 Acyltransferase HYG85_08885 PF06418 CTP synthase N-terminus HYG85_08885 PF00117 Glutamine amidotransferase class-I HYG85_08890 PF17820 PDZ domain HYG85_08890 PF03572 Peptidase family S41 HYG85_08890 PF01471 Putative peptidoglycan binding domain HYG85_08925 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain HYG85_08925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYG85_08925 PF00989 PAS fold HYG85_08925 PF17203 Single cache domain 3 HYG85_08930 PF04397 LytTr DNA-binding domain HYG85_08930 PF00072 Response regulator receiver domain HYG85_08940 PF04647 Accessory gene regulator B HYG85_08945 PF00989 PAS fold HYG85_08945 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain HYG85_08945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYG85_08945 PF17203 Single cache domain 3 HYG85_08950 PF04397 LytTr DNA-binding domain HYG85_08950 PF00072 Response regulator receiver domain HYG85_08955 PF00483 Nucleotidyl transferase HYG85_08965 PF07478 D-ala D-ala ligase C-terminus HYG85_08965 PF01820 D-ala D-ala ligase N-terminus HYG85_08970 PF09551 Stage II sporulation protein R (spore_II_R) HYG85_08985 PF03323 Bacillus/Clostridium GerA spore germination protein HYG85_08995 PF07729 FCD domain HYG85_08995 PF00392 Bacterial regulatory proteins, gntR family HYG85_09000 PF00288 GHMP kinases N terminal domain HYG85_09000 PF08544 GHMP kinases C terminal HYG85_09010 PF06257 Biofilm formation stimulator VEG HYG85_09015 PF10502 Signal peptidase, peptidase S26 HYG85_09025 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HYG85_09025 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HYG85_09025 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HYG85_09025 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HYG85_09040 PF12833 Helix-turn-helix domain HYG85_09040 PF00072 Response regulator receiver domain HYG85_09045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYG85_09045 PF00672 HAMP domain HYG85_09045 PF06580 Histidine kinase HYG85_09045 PF02743 Cache domain HYG85_09055 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_09060 PF08402 TOBE domain HYG85_09060 PF00005 ABC transporter HYG85_09080 PF03323 Bacillus/Clostridium GerA spore germination protein HYG85_09090 PF12627 Probable RNA and SrmB- binding site of polymerase A HYG85_09090 PF01743 Poly A polymerase head domain HYG85_09090 PF13735 tRNA nucleotidyltransferase domain 2 putative HYG85_09095 PF01238 Phosphomannose isomerase type I HYG85_09110 PF12679 ABC-2 family transporter protein HYG85_09115 PF00005 ABC transporter HYG85_09125 PF03313 Serine dehydratase alpha chain HYG85_09140 PF00535 Glycosyl transferase family 2 HYG85_09160 PF04138 GtrA-like protein HYG85_09165 PF00535 Glycosyl transferase family 2 HYG85_09185 PF06719 AraC-type transcriptional regulator N-terminus HYG85_09185 PF12833 Helix-turn-helix domain HYG85_09200 PF03129 Anticodon binding domain HYG85_09200 PF09180 Prolyl-tRNA synthetase, C-terminal HYG85_09200 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HYG85_09275 PF00072 Response regulator receiver domain HYG85_09275 PF04397 LytTr DNA-binding domain HYG85_09280 PF01580 FtsK/SpoIIIE family HYG85_09280 PF12538 DNA transporter HYG85_09295 PF01966 HD domain HYG85_09440 PF01594 AI-2E family transporter HYG85_09445 PF00486 Transcriptional regulatory protein, C terminal HYG85_09445 PF00072 Response regulator receiver domain HYG85_09455 PF17785 PUA-like domain HYG85_09455 PF10672 S-adenosylmethionine-dependent methyltransferase HYG85_09475 PF02590 Predicted SPOUT methyltransferase HYG85_09480 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HYG85_09500 PF00512 His Kinase A (phospho-acceptor) domain HYG85_09500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYG85_09500 PF00672 HAMP domain HYG85_09500 PF13426 PAS domain HYG85_09505 PF00072 Response regulator receiver domain HYG85_09505 PF00486 Transcriptional regulatory protein, C terminal HYG85_09510 PF01476 LysM domain HYG85_09510 PF01551 Peptidase family M23 HYG85_09535 PF00395 S-layer homology domain HYG85_09540 PF00395 S-layer homology domain HYG85_09540 PF00963 Cohesin domain HYG85_09560 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain HYG85_09560 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain HYG85_09565 PF16363 GDP-mannose 4,6 dehydratase HYG85_09570 PF00288 GHMP kinases N terminal domain HYG85_09570 PF08544 GHMP kinases C terminal HYG85_09570 PF10509 Galactokinase galactose-binding signature HYG85_09575 PF00356 Bacterial regulatory proteins, lacI family HYG85_09590 PF04101 Glycosyltransferase family 28 C-terminal domain HYG85_09590 PF03033 Glycosyltransferase family 28 N-terminal domain HYG85_09595 PF01230 HIT domain HYG85_09600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYG85_09600 PF00512 His Kinase A (phospho-acceptor) domain HYG85_09600 PF00989 PAS fold HYG85_09625 PF01694 Rhomboid family HYG85_09630 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HYG85_09635 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II HYG85_09635 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg HYG85_09645 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase HYG85_09695 PF03793 PASTA domain HYG85_09695 PF00069 Protein kinase domain HYG85_09700 PF08534 Redoxin HYG85_09705 PF00395 S-layer homology domain HYG85_09715 PF00709 Adenylosuccinate synthetase HYG85_09730 PF00392 Bacterial regulatory proteins, gntR family HYG85_09730 PF07702 UTRA domain HYG85_09735 PF01228 Glycine radical HYG85_09735 PF02901 Pyruvate formate lyase-like HYG85_09740 PF04055 Radical SAM superfamily HYG85_09745 PF12838 4Fe-4S dicluster domain HYG85_09760 PF00700 Bacterial flagellin C-terminal helical region HYG85_09760 PF00669 Bacterial flagellin N-terminal helical region HYG85_09785 PF03965 Penicillinase repressor HYG85_09790 PF02132 RecR protein HYG85_09790 PF13662 Toprim domain HYG85_09795 PF02575 YbaB/EbfC DNA-binding family HYG85_09800 PF02277 Phosphoribosyltransferase HYG85_09805 PF12169 DNA polymerase III subunits gamma and tau domain III HYG85_09815 PF02838 Glycosyl hydrolase family 20, domain 2 HYG85_09815 PF00728 Glycosyl hydrolase family 20, catalytic domain HYG85_09815 PF07691 PA14 domain HYG85_09820 PF14437 MafB19-like deaminase HYG85_09835 PF12833 Helix-turn-helix domain HYG85_09835 PF07883 Cupin domain HYG85_09845 PF13195 Protein of unknown function (DUF4011) HYG85_09845 PF13087 AAA domain HYG85_09845 PF13086 AAA domain HYG85_09860 PF02872 5'-nucleotidase, C-terminal domain HYG85_09860 PF00149 Calcineurin-like phosphoesterase HYG85_09875 PF13302 Acetyltransferase (GNAT) domain HYG85_09885 PF00664 ABC transporter transmembrane region HYG85_09885 PF00005 ABC transporter HYG85_09890 PF13186 Iron-sulfur cluster-binding domain HYG85_09890 PF04055 Radical SAM superfamily HYG85_09935 PF02903 Alpha amylase, N-terminal ig-like domain HYG85_09935 PF00128 Alpha amylase, catalytic domain HYG85_09935 PF16657 Maltogenic Amylase, C-terminal domain HYG85_09940 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_09945 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_09955 PF02806 Alpha amylase, C-terminal all-beta domain HYG85_09955 PF00686 Starch binding domain HYG85_09955 PF01833 IPT/TIG domain HYG85_09955 PF00128 Alpha amylase, catalytic domain HYG85_09960 PF00356 Bacterial regulatory proteins, lacI family HYG85_09965 PF00701 Dihydrodipicolinate synthetase family HYG85_09970 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HYG85_09970 PF07992 Pyridine nucleotide-disulphide oxidoreductase HYG85_09995 PF03313 Serine dehydratase alpha chain HYG85_10000 PF02653 Branched-chain amino acid transport system / permease component HYG85_10005 PF02653 Branched-chain amino acid transport system / permease component HYG85_10010 PF00005 ABC transporter HYG85_10015 PF02371 Transposase IS116/IS110/IS902 family HYG85_10015 PF01548 Transposase HYG85_10060 PF17853 GGDEF-like domain HYG85_10060 PF13556 PucR C-terminal helix-turn-helix domain HYG85_10060 PF07905 Purine catabolism regulatory protein-like family HYG85_10065 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II HYG85_10065 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg HYG85_10080 PF01048 Phosphorylase superfamily HYG85_10085 PF17128 Domain of unknown function (DUF5107) HYG85_10085 PF13181 Tetratricopeptide repeat HYG85_10095 PF12833 Helix-turn-helix domain HYG85_10095 PF02311 AraC-like ligand binding domain HYG85_10105 PF07702 UTRA domain HYG85_10105 PF00392 Bacterial regulatory proteins, gntR family HYG85_10110 PF02608 ABC transporter substrate-binding protein PnrA-like HYG85_10115 PF00005 ABC transporter HYG85_10120 PF02653 Branched-chain amino acid transport system / permease component HYG85_10125 PF02653 Branched-chain amino acid transport system / permease component HYG85_10135 PF00294 pfkB family carbohydrate kinase HYG85_10140 PF01048 Phosphorylase superfamily HYG85_10145 PF03437 BtpA family HYG85_10150 PF00465 Iron-containing alcohol dehydrogenase HYG85_10155 PF00290 Tryptophan synthase alpha chain HYG85_10160 PF03167 Uracil DNA glycosylase superfamily HYG85_10175 PF12852 Cupin HYG85_10175 PF12833 Helix-turn-helix domain HYG85_10195 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_10200 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_10205 PF09261 Alpha mannosidase middle domain HYG85_10205 PF07748 Glycosyl hydrolases family 38 C-terminal domain HYG85_10205 PF01074 Glycosyl hydrolases family 38 N-terminal domain HYG85_10210 PF00300 Histidine phosphatase superfamily (branch 1) HYG85_10215 PF00356 Bacterial regulatory proteins, lacI family HYG85_10220 PF00300 Histidine phosphatase superfamily (branch 1) HYG85_10225 PF01554 MatE HYG85_10235 PF13685 Iron-containing alcohol dehydrogenase HYG85_10240 PF03009 Glycerophosphoryl diester phosphodiesterase family HYG85_10245 PF13638 PIN domain HYG85_10245 PF02562 PhoH-like protein HYG85_10250 PF01202 Shikimate kinase HYG85_10265 PF00817 impB/mucB/samB family HYG85_10265 PF11799 impB/mucB/samB family C-terminal domain HYG85_10275 PF00265 Thymidine kinase HYG85_10285 PF00440 Bacterial regulatory proteins, tetR family HYG85_10290 PF00873 AcrB/AcrD/AcrF family HYG85_10300 PF01594 AI-2E family transporter HYG85_10310 PF00085 Thioredoxin HYG85_10315 PF13739 Deacetylase PdaC HYG85_10315 PF11738 Protein of unknown function (DUF3298) HYG85_10320 PF08281 Sigma-70, region 4 HYG85_10320 PF04542 Sigma-70 region 2 HYG85_10345 PF02390 Putative methyltransferase HYG85_10355 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit HYG85_10355 PF00037 4Fe-4S binding domain HYG85_10355 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region HYG85_10360 PF02256 Iron hydrogenase small subunit HYG85_10360 PF00037 4Fe-4S binding domain HYG85_10360 PF02906 Iron only hydrogenase large subunit, C-terminal domain HYG85_10360 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region HYG85_10385 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HYG85_10385 PF02743 Cache domain HYG85_10385 PF00672 HAMP domain HYG85_10390 PF00331 Glycosyl hydrolase family 10 HYG85_10390 PF00756 Putative esterase HYG85_10390 PF00404 Dockerin type I domain HYG85_10390 PF03422 Carbohydrate binding module (family 6) HYG85_10395 PF03422 Carbohydrate binding module (family 6) HYG85_10395 PF00404 Dockerin type I domain HYG85_10395 PF00756 Putative esterase HYG85_10395 PF00331 Glycosyl hydrolase family 10 HYG85_10400 PF01547 Bacterial extracellular solute-binding protein HYG85_10405 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_10410 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_10415 PF00072 Response regulator receiver domain HYG85_10415 PF12833 Helix-turn-helix domain HYG85_10420 PF07694 5TMR of 5TMR-LYT HYG85_10420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYG85_10420 PF06580 Histidine kinase HYG85_10450 PF00392 Bacterial regulatory proteins, gntR family HYG85_10450 PF07702 UTRA domain HYG85_10455 PF07702 UTRA domain HYG85_10455 PF00392 Bacterial regulatory proteins, gntR family HYG85_10465 PF13419 Haloacid dehalogenase-like hydrolase HYG85_10475 PF04434 SWIM zinc finger HYG85_10475 PF00176 SNF2 family N-terminal domain HYG85_10475 PF00271 Helicase conserved C-terminal domain HYG85_10480 PF04055 Radical SAM superfamily HYG85_10485 PF03851 UV-endonuclease UvdE HYG85_10500 PF01053 Cys/Met metabolism PLP-dependent enzyme HYG85_10505 PF01638 HxlR-like helix-turn-helix HYG85_10510 PF02653 Branched-chain amino acid transport system / permease component HYG85_10515 PF00005 ABC transporter HYG85_10520 PF13407 Periplasmic binding protein domain HYG85_10525 PF13407 Periplasmic binding protein domain HYG85_10530 PF12833 Helix-turn-helix domain HYG85_10530 PF00072 Response regulator receiver domain HYG85_10530 PF00072 Response regulator receiver domain HYG85_10530 PF12833 Helix-turn-helix domain HYG85_10535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYG85_10535 PF06580 Histidine kinase HYG85_10535 PF07694 5TMR of 5TMR-LYT HYG85_10545 PF01022 Bacterial regulatory protein, arsR family HYG85_10550 PF02403 Seryl-tRNA synthetase N-terminal domain HYG85_10550 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HYG85_10555 PF01966 HD domain HYG85_10555 PF11871 Domain of unknown function (DUF3391) HYG85_10560 PF00171 Aldehyde dehydrogenase family HYG85_10560 PF00465 Iron-containing alcohol dehydrogenase HYG85_10580 PF02195 ParB-like nuclease domain HYG85_10580 PF17762 HTH domain found in ParB protein HYG85_10585 PF13614 AAA domain HYG85_10590 PF03485 Arginyl tRNA synthetase N terminal domain HYG85_10590 PF05746 DALR anticodon binding domain HYG85_10590 PF00750 tRNA synthetases class I (R) HYG85_10595 PF00196 Bacterial regulatory proteins, luxR family HYG85_10595 PF00072 Response regulator receiver domain HYG85_10600 PF05384 Sensor protein DegS HYG85_10600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYG85_10600 PF07730 Histidine kinase HYG85_10610 PF13673 Acetyltransferase (GNAT) domain HYG85_10615 PF02195 ParB-like nuclease domain HYG85_10615 PF17762 HTH domain found in ParB protein HYG85_10620 PF02527 rRNA small subunit methyltransferase G HYG85_10625 PF13932 GidA associated domain HYG85_10625 PF01134 Glucose inhibited division protein A HYG85_10630 PF12631 MnmE helical domain HYG85_10630 PF10396 GTP-binding protein TrmE N-terminus HYG85_10630 PF01926 50S ribosome-binding GTPase HYG85_10635 PF14804 Jag N-terminus HYG85_10635 PF01424 R3H domain HYG85_10640 PF02096 60Kd inner membrane protein HYG85_10645 PF01809 Putative membrane protein insertion efficiency factor HYG85_10650 PF00825 Ribonuclease P HYG85_10655 PF00468 Ribosomal protein L34 HYG85_10660 PF11638 DnaA N-terminal domain HYG85_10660 PF08299 Bacterial dnaA protein helix-turn-helix HYG85_10660 PF00308 Bacterial dnaA protein HYG85_10665 PF02768 DNA polymerase III beta subunit, C-terminal domain HYG85_10665 PF00712 DNA polymerase III beta subunit, N-terminal domain HYG85_10665 PF02767 DNA polymerase III beta subunit, central domain HYG85_10675 PF13476 AAA domain HYG85_10680 PF00986 DNA gyrase B subunit, carboxyl terminus HYG85_10680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYG85_10680 PF00204 DNA gyrase B HYG85_10680 PF01751 Toprim domain HYG85_10685 PF00521 DNA gyrase/topoisomerase IV, subunit A HYG85_10685 PF03989 DNA gyrase C-terminal domain, beta-propeller HYG85_10690 PF00150 Cellulase (glycosyl hydrolase family 5) HYG85_10690 PF00395 S-layer homology domain HYG85_10690 PF03424 Carbohydrate binding domain (family 17/28) HYG85_10695 PF05681 Fumarate hydratase (Fumerase) HYG85_10710 PF02608 ABC transporter substrate-binding protein PnrA-like HYG85_10715 PF00005 ABC transporter HYG85_10720 PF02653 Branched-chain amino acid transport system / permease component HYG85_10725 PF02653 Branched-chain amino acid transport system / permease component HYG85_10785 PF01276 Orn/Lys/Arg decarboxylase, major domain HYG85_10785 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain HYG85_10790 PF02223 Thymidylate kinase HYG85_10795 PF06153 Cyclic-di-AMP receptor HYG85_10805 PF09115 DNA polymerase III, delta subunit, C terminal HYG85_10810 PF04468 PSP1 C-terminal conserved region HYG85_10815 PF05175 Methyltransferase small domain HYG85_10820 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HYG85_10825 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin HYG85_10825 PF18277 AbrB C-terminal domain HYG85_10830 PF01842 ACT domain HYG85_10830 PF03315 Serine dehydratase beta chain HYG85_10835 PF03313 Serine dehydratase alpha chain HYG85_10850 PF00005 ABC transporter HYG85_10865 PF07670 Nucleoside recognition HYG85_10875 PF03734 L,D-transpeptidase catalytic domain HYG85_10875 PF01476 LysM domain HYG85_10890 PF13732 Domain of unknown function (DUF4162) HYG85_10890 PF00005 ABC transporter HYG85_10900 PF04542 Sigma-70 region 2 HYG85_10900 PF08281 Sigma-70, region 4 HYG85_10915 PF00009 Elongation factor Tu GTP binding domain HYG85_10915 PF00679 Elongation factor G C-terminus HYG85_10915 PF14492 Elongation Factor G, domain II HYG85_10915 PF03144 Elongation factor Tu domain 2 HYG85_10920 PF00909 Ammonium Transporter Family HYG85_10925 PF00543 Nitrogen regulatory protein P-II HYG85_10930 PF12833 Helix-turn-helix domain HYG85_10930 PF00072 Response regulator receiver domain HYG85_10935 PF00672 HAMP domain HYG85_10935 PF02743 Cache domain HYG85_10935 PF06580 Histidine kinase HYG85_10935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYG85_10945 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_10950 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_10960 PF00480 ROK family HYG85_10965 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase HYG85_10970 PF00356 Bacterial regulatory proteins, lacI family HYG85_10975 PF01547 Bacterial extracellular solute-binding protein HYG85_10980 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_10985 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_10990 PF01380 SIS domain HYG85_10995 PF01979 Amidohydrolase family HYG85_11005 PF00356 Bacterial regulatory proteins, lacI family HYG85_11005 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family HYG85_11010 PF00365 Phosphofructokinase HYG85_11020 PF00121 Triosephosphate isomerase HYG85_11030 PF01116 Fructose-bisphosphate aldolase class-II HYG85_11040 PF00342 Phosphoglucose isomerase HYG85_11045 PF08264 Anticodon-binding domain of tRNA HYG85_11045 PF09334 tRNA synthetases class I (M) HYG85_11045 PF01588 Putative tRNA binding domain HYG85_11050 PF01026 TatD related DNase HYG85_11060 PF00398 Ribosomal RNA adenine dimethylase HYG85_11070 PF01066 CDP-alcohol phosphatidyltransferase HYG85_11085 PF03551 Transcriptional regulator PadR-like family HYG85_11090 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III HYG85_11090 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal HYG85_11095 PF00550 Phosphopantetheine attachment site HYG85_11100 PF03060 Nitronate monooxygenase HYG85_11105 PF00698 Acyl transferase domain HYG85_11115 PF00109 Beta-ketoacyl synthase, N-terminal domain HYG85_11115 PF02801 Beta-ketoacyl synthase, C-terminal domain HYG85_11120 PF00364 Biotin-requiring enzyme HYG85_11125 PF07977 FabA-like domain HYG85_11130 PF00289 Biotin carboxylase, N-terminal domain HYG85_11130 PF02785 Biotin carboxylase C-terminal domain HYG85_11130 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HYG85_11135 PF01039 Carboxyl transferase domain HYG85_11135 PF17848 Acetyl-coA carboxylase zinc finger domain HYG85_11140 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit HYG85_11145 PF01522 Polysaccharide deacetylase HYG85_11150 PF00664 ABC transporter transmembrane region HYG85_11150 PF00005 ABC transporter HYG85_11155 PF00082 Subtilase family HYG85_11165 PF04055 Radical SAM superfamily HYG85_11165 PF13186 Iron-sulfur cluster-binding domain HYG85_11190 PF00455 DeoR C terminal sensor domain HYG85_11190 PF08220 DeoR-like helix-turn-helix domain HYG85_11195 PF00342 Phosphoglucose isomerase HYG85_11200 PF12833 Helix-turn-helix domain HYG85_11205 PF01554 MatE HYG85_11210 PF00872 Transposase, Mutator family HYG85_11220 PF03749 Sugar fermentation stimulation protein RE domain HYG85_11220 PF17746 SfsA N-terminal OB domain HYG85_11225 PF02829 3H domain HYG85_11225 PF08279 HTH domain HYG85_11240 PF04542 Sigma-70 region 2 HYG85_11240 PF08281 Sigma-70, region 4 HYG85_11270 PF06866 Protein of unknown function (DUF1256) HYG85_11280 PF00703 Glycosyl hydrolases family 2 HYG85_11280 PF16355 Domain of unknown function (DUF4982) HYG85_11280 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 HYG85_11280 PF02836 Glycosyl hydrolases family 2, TIM barrel domain HYG85_11280 PF02837 Glycosyl hydrolases family 2, sugar binding domain HYG85_11285 PF12833 Helix-turn-helix domain HYG85_11295 PF01432 Peptidase family M3 HYG85_11295 PF08439 Oligopeptidase F HYG85_11300 PF08323 Starch synthase catalytic domain HYG85_11300 PF00534 Glycosyl transferases group 1 HYG85_11405 PF06107 Bacterial protein of unknown function (DUF951) HYG85_11410 PF01250 Ribosomal protein S6 HYG85_11415 PF00436 Single-strand binding protein family HYG85_11420 PF01084 Ribosomal protein S18 HYG85_11435 PF01368 DHH family HYG85_11435 PF02272 DHHA1 domain HYG85_11440 PF01281 Ribosomal protein L9, N-terminal domain HYG85_11440 PF03948 Ribosomal protein L9, C-terminal domain HYG85_11445 PF03796 DnaB-like helicase C terminal domain HYG85_11445 PF00772 DnaB-like helicase N terminal domain HYG85_11450 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_11455 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_11460 PF13416 Bacterial extracellular solute-binding protein HYG85_11465 PF00512 His Kinase A (phospho-acceptor) domain HYG85_11465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYG85_11465 PF00497 Bacterial extracellular solute-binding proteins, family 3 HYG85_11470 PF00196 Bacterial regulatory proteins, luxR family HYG85_11470 PF00072 Response regulator receiver domain HYG85_11495 PF00437 Type II/IV secretion system protein HYG85_11515 PF16697 Inner membrane component of T3SS, cytoplasmic domain HYG85_11535 PF01966 HD domain HYG85_11545 PF00704 Glycosyl hydrolases family 18 HYG85_11550 PF01520 N-acetylmuramoyl-L-alanine amidase HYG85_11560 PF03481 Putative GTP-binding controlling metal-binding HYG85_11560 PF01300 Telomere recombination HYG85_11565 PF01451 Low molecular weight phosphotyrosine protein phosphatase HYG85_11570 PF02502 Ribose/Galactose Isomerase HYG85_11575 PF14437 MafB19-like deaminase HYG85_11580 PF00953 Glycosyl transferase family 4 HYG85_11590 PF00696 Amino acid kinase family HYG85_11590 PF13840 ACT domain HYG85_11590 PF01842 ACT domain HYG85_11595 PF02350 UDP-N-acetylglucosamine 2-epimerase HYG85_11610 PF00119 ATP synthase A chain HYG85_11615 PF00137 ATP synthase subunit C HYG85_11620 PF00137 ATP synthase subunit C HYG85_11630 PF00213 ATP synthase delta (OSCP) subunit HYG85_11635 PF02874 ATP synthase alpha/beta family, beta-barrel domain HYG85_11635 PF00306 ATP synthase alpha/beta chain, C terminal domain HYG85_11635 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HYG85_11640 PF00231 ATP synthase HYG85_11645 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HYG85_11645 PF02874 ATP synthase alpha/beta family, beta-barrel domain HYG85_11650 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain HYG85_11650 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain HYG85_11670 PF00395 S-layer homology domain HYG85_11670 PF00963 Cohesin domain HYG85_11680 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HYG85_11705 PF00664 ABC transporter transmembrane region HYG85_11705 PF00005 ABC transporter HYG85_11710 PF00005 ABC transporter HYG85_11710 PF00664 ABC transporter transmembrane region HYG85_11725 PF02535 ZIP Zinc transporter HYG85_11730 PF00128 Alpha amylase, catalytic domain HYG85_11735 PF13529 Peptidase_C39 like family HYG85_11740 PF06940 Domain of unknown function (DUF1287) HYG85_11805 PF02073 Thermophilic metalloprotease (M29) HYG85_11810 PF00152 tRNA synthetases class II (D, K and N) HYG85_11810 PF01336 OB-fold nucleic acid binding domain HYG85_11820 PF00924 Mechanosensitive ion channel HYG85_11820 PF05552 Conserved TM helix HYG85_11825 PF05343 M42 glutamyl aminopeptidase HYG85_11830 PF07702 UTRA domain HYG85_11830 PF00392 Bacterial regulatory proteins, gntR family HYG85_11840 PF00684 DnaJ central domain HYG85_11840 PF00226 DnaJ domain HYG85_11840 PF01556 DnaJ C terminal domain HYG85_11850 PF00365 Phosphofructokinase HYG85_11870 PF01547 Bacterial extracellular solute-binding protein HYG85_11875 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_11880 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_11885 PF12833 Helix-turn-helix domain HYG85_11920 PF01225 Mur ligase family, catalytic domain HYG85_11920 PF02875 Mur ligase family, glutamate ligase domain HYG85_11920 PF08245 Mur ligase middle domain HYG85_11925 PF00156 Phosphoribosyl transferase domain HYG85_11925 PF09182 Bacterial purine repressor, N-terminal HYG85_11930 PF00483 Nucleotidyl transferase HYG85_11930 PF00132 Bacterial transferase hexapeptide (six repeats) HYG85_11935 PF00483 Nucleotidyl transferase HYG85_11940 PF04026 SpoVG HYG85_11945 PF12804 MobA-like NTP transferase domain HYG85_11945 PF00132 Bacterial transferase hexapeptide (six repeats) HYG85_11950 PF14572 Phosphoribosyl synthetase-associated domain HYG85_11950 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase HYG85_11955 PF01195 Peptidyl-tRNA hydrolase HYG85_11965 PF00271 Helicase conserved C-terminal domain HYG85_11965 PF03461 TRCF domain HYG85_11965 PF02559 CarD-like/TRCF domain HYG85_11965 PF00270 DEAD/DEAH box helicase HYG85_11965 PF17757 UvrB interaction domain HYG85_11975 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin HYG85_11975 PF15714 Stage V sporulation protein T C-terminal, transcription factor HYG85_11980 PF03819 MazG nucleotide pyrophosphohydrolase domain HYG85_11985 PF00216 Bacterial DNA-binding protein HYG85_11990 PF01479 S4 domain HYG85_11995 PF07873 YabP family HYG85_12010 PF07228 Stage II sporulation protein E (SpoIIE) HYG85_12015 PF11734 TilS substrate C-terminal domain HYG85_12015 PF01171 PP-loop family HYG85_12020 PF00156 Phosphoribosyl transferase domain HYG85_12025 PF01434 Peptidase family M41 HYG85_12025 PF06480 FtsH Extracellular HYG85_12025 PF17862 AAA+ lid domain HYG85_12025 PF00004 ATPase family associated with various cellular activities (AAA) HYG85_12030 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 HYG85_12040 PF00710 Asparaginase, N-terminal HYG85_12040 PF17763 Glutaminase/Asparaginase C-terminal domain HYG85_12050 PF00128 Alpha amylase, catalytic domain HYG85_12050 PF02903 Alpha amylase, N-terminal ig-like domain HYG85_12055 PF00072 Response regulator receiver domain HYG85_12055 PF00486 Transcriptional regulatory protein, C terminal HYG85_12060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYG85_12060 PF00989 PAS fold HYG85_12060 PF16736 Single Cache-like HYG85_12060 PF00512 His Kinase A (phospho-acceptor) domain HYG85_12065 PF00005 ABC transporter HYG85_12075 PF00313 'Cold-shock' DNA-binding domain HYG85_12160 PF13538 UvrD-like helicase C-terminal domain HYG85_12170 PF04539 Sigma-70 region 3 HYG85_12170 PF04542 Sigma-70 region 2 HYG85_12170 PF04545 Sigma-70, region 4 HYG85_12180 PF01074 Glycosyl hydrolases family 38 N-terminal domain HYG85_12180 PF07748 Glycosyl hydrolases family 38 C-terminal domain HYG85_12180 PF09261 Alpha mannosidase middle domain HYG85_12205 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_12210 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_12215 PF00005 ABC transporter HYG85_12215 PF17912 MalK OB fold domain HYG85_12215 PF03459 TOBE domain HYG85_12220 PF00128 Alpha amylase, catalytic domain HYG85_12220 PF11941 Domain of unknown function (DUF3459) HYG85_12225 PF00128 Alpha amylase, catalytic domain HYG85_12225 PF02903 Alpha amylase, N-terminal ig-like domain HYG85_12225 PF16657 Maltogenic Amylase, C-terminal domain HYG85_12230 PF00356 Bacterial regulatory proteins, lacI family HYG85_12285 PF17482 Phage tail sheath C-terminal domain HYG85_12285 PF04984 Phage tail sheath protein subtilisin-like domain HYG85_12285 PF17481 Phage tail sheath protein beta-sandwich domain HYG85_12290 PF09393 Phage tail tube protein HYG85_12305 PF01476 LysM domain HYG85_12325 PF04865 Baseplate J-like protein HYG85_12330 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) HYG85_12360 PF00128 Alpha amylase, catalytic domain HYG85_12360 PF02806 Alpha amylase, C-terminal all-beta domain HYG85_12360 PF03714 Bacterial pullanase-associated domain HYG85_12400 PF02777 Iron/manganese superoxide dismutases, C-terminal domain HYG85_12400 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain HYG85_12405 PF03734 L,D-transpeptidase catalytic domain HYG85_12420 PF00633 Helix-hairpin-helix motif HYG85_12420 PF00730 HhH-GPD superfamily base excision DNA repair protein HYG85_12425 PF00485 Phosphoribulokinase / Uridine kinase family HYG85_12435 PF02811 PHP domain HYG85_12435 PF14579 Helix-hairpin-helix motif HYG85_12435 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HYG85_12435 PF07733 Bacterial DNA polymerase III alpha NTPase domain HYG85_12435 PF11490 DNA polymerase III polC-type N-terminus II HYG85_12435 PF00929 Exonuclease HYG85_12445 PF01817 Chorismate mutase type II HYG85_12445 PF00800 Prephenate dehydratase HYG85_12450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYG85_12450 PF06580 Histidine kinase HYG85_12450 PF02743 Cache domain HYG85_12450 PF00672 HAMP domain HYG85_12455 PF00072 Response regulator receiver domain HYG85_12455 PF12833 Helix-turn-helix domain HYG85_12465 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_12470 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_12480 PF00793 DAHP synthetase I family HYG85_12480 PF18152 DAHP synthase ferredoxin-like domain HYG85_12485 PF00395 S-layer homology domain HYG85_12495 PF04294 VanW like protein HYG85_12500 PF00586 AIR synthase related protein, N-terminal domain HYG85_12500 PF02769 AIR synthase related protein, C-terminal domain HYG85_12500 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain HYG85_12505 PF01037 Lrp/AsnC ligand binding domain HYG85_12510 PF00155 Aminotransferase class I and II HYG85_12520 PF01475 Ferric uptake regulator family HYG85_12525 PF12833 Helix-turn-helix domain HYG85_12540 PF00588 SpoU rRNA Methylase family HYG85_12545 PF01116 Fructose-bisphosphate aldolase class-II HYG85_12550 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HYG85_12550 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HYG85_12555 PF00596 Class II Aldolase and Adducin N-terminal domain HYG85_12565 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_12570 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_12575 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HYG85_12575 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HYG85_12580 PF00480 ROK family HYG85_12585 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase HYG85_12585 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain HYG85_12605 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HYG85_12605 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HYG85_12615 PF01074 Glycosyl hydrolases family 38 N-terminal domain HYG85_12615 PF07748 Glycosyl hydrolases family 38 C-terminal domain HYG85_12615 PF09261 Alpha mannosidase middle domain HYG85_12625 PF12833 Helix-turn-helix domain HYG85_12625 PF02311 AraC-like ligand binding domain HYG85_12630 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_12635 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_12640 PF12010 Domain of unknown function (DUF3502) HYG85_12645 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HYG85_12645 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HYG85_12660 PF02837 Glycosyl hydrolases family 2, sugar binding domain HYG85_12660 PF16355 Domain of unknown function (DUF4982) HYG85_12660 PF02836 Glycosyl hydrolases family 2, TIM barrel domain HYG85_12660 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 HYG85_12660 PF00703 Glycosyl hydrolases family 2 HYG85_12665 PF14525 AraC-binding-like domain HYG85_12665 PF12833 Helix-turn-helix domain HYG85_12670 PF01872 RibD C-terminal domain HYG85_12675 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HYG85_12675 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HYG85_12680 PF00072 Response regulator receiver domain HYG85_12680 PF12833 Helix-turn-helix domain HYG85_12690 PF07486 Cell Wall Hydrolase HYG85_12695 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_12700 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_12705 PF12010 Domain of unknown function (DUF3502) HYG85_12710 PF00005 ABC transporter HYG85_12730 PF00512 His Kinase A (phospho-acceptor) domain HYG85_12730 PF00672 HAMP domain HYG85_12730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYG85_12735 PF00486 Transcriptional regulatory protein, C terminal HYG85_12735 PF00072 Response regulator receiver domain HYG85_12740 PF00488 MutS domain V HYG85_12740 PF01713 Smr domain HYG85_12745 PF12833 Helix-turn-helix domain HYG85_12745 PF12852 Cupin HYG85_12750 PF06964 Alpha-L-arabinofuranosidase C-terminal domain HYG85_12755 PF01551 Peptidase family M23 HYG85_12755 PF01476 LysM domain HYG85_12755 PF08525 Opacity-associated protein A N-terminal motif HYG85_12765 PF13180 PDZ domain HYG85_12770 PF01966 HD domain HYG85_12775 PF01938 TRAM domain HYG85_12775 PF05958 tRNA (Uracil-5-)-methyltransferase HYG85_12800 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HYG85_12800 PF07992 Pyridine nucleotide-disulphide oxidoreductase HYG85_12820 PF00209 Sodium:neurotransmitter symporter family HYG85_12855 PF00403 Heavy-metal-associated domain HYG85_12885 PF01795 MraW methylase family HYG85_12895 PF00391 PEP-utilising enzyme, mobile domain HYG85_12895 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain HYG85_12910 PF12833 Helix-turn-helix domain HYG85_12915 PF01047 MarR family HYG85_12920 PF01475 Ferric uptake regulator family HYG85_12935 PF00005 ABC transporter HYG85_12940 PF00005 ABC transporter HYG85_12945 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_12950 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_12965 PF06483 Chitinase C HYG85_12965 PF00704 Glycosyl hydrolases family 18 HYG85_12980 PF00356 Bacterial regulatory proteins, lacI family HYG85_12985 PF04041 beta-1,4-mannooligosaccharide phosphorylase HYG85_13000 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HYG85_13000 PF07992 Pyridine nucleotide-disulphide oxidoreductase HYG85_13010 PF00561 alpha/beta hydrolase fold HYG85_13045 PF03527 RHS protein HYG85_13070 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_13075 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_13085 PF12833 Helix-turn-helix domain HYG85_13085 PF00072 Response regulator receiver domain HYG85_13090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYG85_13090 PF13492 GAF domain HYG85_13090 PF07694 5TMR of 5TMR-LYT HYG85_13090 PF06580 Histidine kinase HYG85_13100 PF01593 Flavin containing amine oxidoreductase HYG85_13100 PF02027 RolB/RolC glucosidase family HYG85_13105 PF02492 CobW/HypB/UreG, nucleotide-binding domain HYG85_13110 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster HYG85_13110 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region HYG85_13110 PF07992 Pyridine nucleotide-disulphide oxidoreductase HYG85_13115 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA HYG85_13120 PF01209 ubiE/COQ5 methyltransferase family HYG85_13125 PF00884 Sulfatase HYG85_13125 PF16347 Domain of unknown function (DUF4976) HYG85_13130 PF06445 GyrI-like small molecule binding domain HYG85_13130 PF13411 MerR HTH family regulatory protein HYG85_13135 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HYG85_13135 PF00672 HAMP domain HYG85_13135 PF02743 Cache domain HYG85_13140 PF04474 Protein of unknown function (DUF554) HYG85_13160 PF12833 Helix-turn-helix domain HYG85_13165 PF00005 ABC transporter HYG85_13165 PF08021 Siderophore-interacting FAD-binding domain HYG85_13165 PF04954 Siderophore-interacting protein HYG85_13165 PF00664 ABC transporter transmembrane region HYG85_13170 PF00005 ABC transporter HYG85_13170 PF00664 ABC transporter transmembrane region HYG85_13175 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_13180 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_13180 PF12911 N-terminal TM domain of oligopeptide transport permease C HYG85_13185 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HYG85_13185 PF00005 ABC transporter HYG85_13190 PF00005 ABC transporter HYG85_13195 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HYG85_13200 PF00583 Acetyltransferase (GNAT) family HYG85_13205 PF00990 Diguanylate cyclase, GGDEF domain HYG85_13205 PF17151 Periplasmic sensor domain HYG85_13210 PF00892 EamA-like transporter family HYG85_13220 PF00664 ABC transporter transmembrane region HYG85_13220 PF00005 ABC transporter HYG85_13225 PF13186 Iron-sulfur cluster-binding domain HYG85_13225 PF04055 Radical SAM superfamily HYG85_13230 PF01593 Flavin containing amine oxidoreductase HYG85_13235 PF12833 Helix-turn-helix domain HYG85_13235 PF06445 GyrI-like small molecule binding domain HYG85_13245 PF13732 Domain of unknown function (DUF4162) HYG85_13245 PF00005 ABC transporter HYG85_13265 PF00005 ABC transporter HYG85_13265 PF00664 ABC transporter transmembrane region HYG85_13275 PF04055 Radical SAM superfamily HYG85_13275 PF02310 B12 binding domain HYG85_13280 PF00202 Aminotransferase class-III HYG85_13285 PF00501 AMP-binding enzyme HYG85_13295 PF06463 Molybdenum Cofactor Synthesis C HYG85_13295 PF04055 Radical SAM superfamily HYG85_13300 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase HYG85_13300 PF00534 Glycosyl transferases group 1 HYG85_13315 PF00501 AMP-binding enzyme HYG85_13315 PF13193 AMP-binding enzyme C-terminal domain HYG85_13315 PF00668 Condensation domain HYG85_13315 PF00550 Phosphopantetheine attachment site HYG85_13320 PF00501 AMP-binding enzyme HYG85_13320 PF13193 AMP-binding enzyme C-terminal domain HYG85_13320 PF00668 Condensation domain HYG85_13320 PF00550 Phosphopantetheine attachment site HYG85_13320 PF00975 Thioesterase domain HYG85_13325 PF00698 Acyl transferase domain HYG85_13330 PF00550 Phosphopantetheine attachment site HYG85_13330 PF00501 AMP-binding enzyme HYG85_13330 PF00668 Condensation domain HYG85_13330 PF13193 AMP-binding enzyme C-terminal domain HYG85_13330 PF00975 Thioesterase domain HYG85_13335 PF00501 AMP-binding enzyme HYG85_13335 PF08659 KR domain HYG85_13335 PF00668 Condensation domain HYG85_13335 PF00550 Phosphopantetheine attachment site HYG85_13335 PF13193 AMP-binding enzyme C-terminal domain HYG85_13335 PF16197 Ketoacyl-synthetase C-terminal extension HYG85_13335 PF00109 Beta-ketoacyl synthase, N-terminal domain HYG85_13335 PF14765 Polyketide synthase dehydratase HYG85_13335 PF02801 Beta-ketoacyl synthase, C-terminal domain HYG85_13340 PF00733 Asparagine synthase HYG85_13340 PF13537 Glutamine amidotransferase domain HYG85_13345 PF00501 AMP-binding enzyme HYG85_13345 PF13193 AMP-binding enzyme C-terminal domain HYG85_13345 PF00975 Thioesterase domain HYG85_13345 PF00668 Condensation domain HYG85_13345 PF00550 Phosphopantetheine attachment site HYG85_13350 PF00501 AMP-binding enzyme HYG85_13350 PF13193 AMP-binding enzyme C-terminal domain HYG85_13350 PF00550 Phosphopantetheine attachment site HYG85_13350 PF00501 AMP-binding enzyme HYG85_13350 PF13193 AMP-binding enzyme C-terminal domain HYG85_13350 PF00668 Condensation domain HYG85_13350 PF00550 Phosphopantetheine attachment site HYG85_13350 PF00668 Condensation domain HYG85_13355 PF16197 Ketoacyl-synthetase C-terminal extension HYG85_13355 PF02801 Beta-ketoacyl synthase, C-terminal domain HYG85_13355 PF00109 Beta-ketoacyl synthase, N-terminal domain HYG85_13355 PF00668 Condensation domain HYG85_13355 PF00550 Phosphopantetheine attachment site HYG85_13355 PF13193 AMP-binding enzyme C-terminal domain HYG85_13355 PF00501 AMP-binding enzyme HYG85_13355 PF00202 Aminotransferase class-III HYG85_13360 PF00550 Phosphopantetheine attachment site HYG85_13360 PF13193 AMP-binding enzyme C-terminal domain HYG85_13360 PF00668 Condensation domain HYG85_13360 PF00975 Thioesterase domain HYG85_13360 PF00501 AMP-binding enzyme HYG85_13370 PF13193 AMP-binding enzyme C-terminal domain HYG85_13370 PF00550 Phosphopantetheine attachment site HYG85_13370 PF00501 AMP-binding enzyme HYG85_13370 PF00668 Condensation domain HYG85_13375 PF00501 AMP-binding enzyme HYG85_13380 PF00550 Phosphopantetheine attachment site HYG85_13385 PF01177 Asp/Glu/Hydantoin racemase HYG85_13400 PF00465 Iron-containing alcohol dehydrogenase HYG85_13430 PF13181 Tetratricopeptide repeat HYG85_13430 PF00535 Glycosyl transferase family 2 HYG85_13455 PF00849 RNA pseudouridylate synthase HYG85_13455 PF01479 S4 domain HYG85_13460 PF02146 Sir2 family HYG85_13470 PF02743 Cache domain HYG85_13470 PF06580 Histidine kinase HYG85_13470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYG85_13470 PF00672 HAMP domain HYG85_13475 PF12833 Helix-turn-helix domain HYG85_13485 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_13490 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_13495 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HYG85_13495 PF02743 Cache domain HYG85_13495 PF00672 HAMP domain HYG85_13515 PF01032 FecCD transport family HYG85_13520 PF00005 ABC transporter HYG85_13530 PF01969 Protein of unknown function DUF111 HYG85_13535 PF02540 NAD synthase HYG85_13540 PF00731 AIR carboxylase HYG85_13550 PF00392 Bacterial regulatory proteins, gntR family HYG85_13555 PF11762 L-arabinose isomerase C-terminal domain HYG85_13555 PF02610 L-arabinose isomerase HYG85_13560 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HYG85_13560 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HYG85_13565 PF00596 Class II Aldolase and Adducin N-terminal domain HYG85_13570 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system HYG85_13585 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HYG85_13585 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HYG85_13595 PF01380 SIS domain HYG85_13595 PF01418 Helix-turn-helix domain, rpiR family HYG85_13600 PF01869 BadF/BadG/BcrA/BcrD ATPase family HYG85_13605 PF07075 Protein of unknown function (DUF1343) HYG85_13620 PF04041 beta-1,4-mannooligosaccharide phosphorylase HYG85_13630 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_13635 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_13640 PF00356 Bacterial regulatory proteins, lacI family HYG85_13650 PF00884 Sulfatase HYG85_13650 PF16347 Domain of unknown function (DUF4976) HYG85_13675 PF09092 Lyase, N terminal HYG85_13675 PF09093 Lyase, catalytic HYG85_13675 PF02278 Polysaccharide lyase family 8, super-sandwich domain HYG85_13680 PF02311 AraC-like ligand binding domain HYG85_13680 PF12833 Helix-turn-helix domain HYG85_13685 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_13690 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_13705 PF00884 Sulfatase HYG85_13710 PF07470 Glycosyl Hydrolase Family 88 HYG85_13720 PF01554 MatE HYG85_13725 PF05190 MutS family domain IV HYG85_13725 PF01624 MutS domain I HYG85_13725 PF05188 MutS domain II HYG85_13725 PF05192 MutS domain III HYG85_13725 PF00488 MutS domain V HYG85_13730 PF10042 Uncharacterized conserved protein (DUF2278) HYG85_13735 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HYG85_13735 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain HYG85_13745 PF03590 Aspartate-ammonia ligase HYG85_13755 PF00999 Sodium/hydrogen exchanger family HYG85_13765 PF00654 Voltage gated chloride channel HYG85_13780 PF07690 Major Facilitator Superfamily HYG85_13785 PF07739 TipAS antibiotic-recognition domain HYG85_13785 PF13411 MerR HTH family regulatory protein HYG85_13795 PF02645 Uncharacterised protein, DegV family COG1307 HYG85_13800 PF07969 Amidohydrolase family HYG85_13805 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain HYG85_13805 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain HYG85_13810 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HYG85_13810 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HYG85_13815 PF13860 FlgD Ig-like domain HYG85_13815 PF05922 Peptidase inhibitor I9 HYG85_13815 PF02225 PA domain HYG85_13815 PF00082 Subtilase family HYG85_13825 PF07730 Histidine kinase HYG85_13830 PF00072 Response regulator receiver domain HYG85_13830 PF00196 Bacterial regulatory proteins, luxR family HYG85_13840 PF00005 ABC transporter HYG85_13855 PF12833 Helix-turn-helix domain HYG85_13860 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HYG85_13860 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HYG85_13870 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HYG85_13870 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HYG85_13880 PF03372 Endonuclease/Exonuclease/phosphatase family HYG85_13890 PF05230 MASE2 domain HYG85_13890 PF00990 Diguanylate cyclase, GGDEF domain HYG85_13895 PF02743 Cache domain HYG85_13895 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HYG85_13895 PF00672 HAMP domain HYG85_13900 PF00356 Bacterial regulatory proteins, lacI family HYG85_13910 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_13915 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_13920 PF03636 Glycosyl hydrolase family 65, N-terminal domain HYG85_13920 PF03632 Glycosyl hydrolase family 65 central catalytic domain HYG85_13920 PF03633 Glycosyl hydrolase family 65, C-terminal domain HYG85_13940 PF01551 Peptidase family M23 HYG85_13965 PF00072 Response regulator receiver domain HYG85_13965 PF00486 Transcriptional regulatory protein, C terminal HYG85_13970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYG85_13970 PF00989 PAS fold HYG85_13970 PF00512 His Kinase A (phospho-acceptor) domain HYG85_13970 PF16736 Single Cache-like HYG85_13975 PF16658 Class II release factor RF3, C-terminal domain HYG85_13975 PF00009 Elongation factor Tu GTP binding domain HYG85_13975 PF03144 Elongation factor Tu domain 2 HYG85_13980 PF01022 Bacterial regulatory protein, arsR family HYG85_13985 PF00403 Heavy-metal-associated domain HYG85_13995 PF12833 Helix-turn-helix domain HYG85_13995 PF02311 AraC-like ligand binding domain HYG85_14000 PF10509 Galactokinase galactose-binding signature HYG85_14000 PF08544 GHMP kinases C terminal HYG85_14000 PF00288 GHMP kinases N terminal domain HYG85_14005 PF00132 Bacterial transferase hexapeptide (six repeats) HYG85_14005 PF00483 Nucleotidyl transferase HYG85_14010 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HYG85_14010 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HYG85_14010 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HYG85_14010 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HYG85_14015 PF16363 GDP-mannose 4,6 dehydratase HYG85_14035 PF00072 Response regulator receiver domain HYG85_14035 PF00486 Transcriptional regulatory protein, C terminal HYG85_14040 PF17961 Bacterial Ig domain HYG85_14040 PF04650 YSIRK type signal peptide HYG85_14040 PF17210 SdrD B-like domain HYG85_14040 PF00746 LPXTG cell wall anchor motif HYG85_14080 PF06445 GyrI-like small molecule binding domain HYG85_14080 PF13411 MerR HTH family regulatory protein HYG85_14085 PF01547 Bacterial extracellular solute-binding protein HYG85_14095 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_14100 PF06580 Histidine kinase HYG85_14100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYG85_14100 PF02743 Cache domain HYG85_14100 PF00672 HAMP domain HYG85_14105 PF12833 Helix-turn-helix domain HYG85_14105 PF00072 Response regulator receiver domain HYG85_14115 PF17386 Lacto-N-biose phosphorylase C-terminal domain HYG85_14115 PF09508 Lacto-N-biose phosphorylase N-terminal TIM barrel domain HYG85_14115 PF17385 Lacto-N-biose phosphorylase central domain HYG85_14120 PF17995 Endo-alpha-N-acetylgalactosaminidase N-terminal HYG85_14120 PF04650 YSIRK type signal peptide HYG85_14120 PF17974 Galactose-binding domain-like HYG85_14120 PF12905 Endo-alpha-N-acetylgalactosaminidase HYG85_14120 PF17451 Glycosyl hydrolase 101 beta sandwich domain HYG85_14120 PF18080 Galactose mutarotase-like fold domain HYG85_14120 PF00754 F5/8 type C domain HYG85_14125 PF08281 Sigma-70, region 4 HYG85_14125 PF04542 Sigma-70 region 2 HYG85_14130 PF11738 Protein of unknown function (DUF3298) HYG85_14130 PF13739 Deacetylase PdaC HYG85_14140 PF03786 D-mannonate dehydratase (UxuA) HYG85_14145 PF01232 Mannitol dehydrogenase Rossmann domain HYG85_14145 PF08125 Mannitol dehydrogenase C-terminal domain HYG85_14150 PF00756 Putative esterase HYG85_14160 PF04011 LemA family HYG85_14220 PF01872 RibD C-terminal domain HYG85_14220 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HYG85_14225 PF00677 Lumazine binding domain HYG85_14230 PF00925 GTP cyclohydrolase II HYG85_14230 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase HYG85_14235 PF00885 6,7-dimethyl-8-ribityllumazine synthase HYG85_14240 PF01037 Lrp/AsnC ligand binding domain HYG85_14245 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain HYG85_14245 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase HYG85_14250 PF07992 Pyridine nucleotide-disulphide oxidoreductase HYG85_14255 PF04143 Sulphur transport HYG85_14265 PF04143 Sulphur transport HYG85_14270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HYG85_14270 PF03466 LysR substrate binding domain HYG85_14280 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family HYG85_14285 PF00535 Glycosyl transferase family 2 HYG85_14300 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_14310 PF00581 Rhodanese-like domain HYG85_14325 PF01047 MarR family HYG85_14330 PF00497 Bacterial extracellular solute-binding proteins, family 3 HYG85_14335 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_14340 PF00005 ABC transporter HYG85_14350 PF01032 FecCD transport family HYG85_14355 PF00005 ABC transporter HYG85_14360 PF02514 CobN/Magnesium Chelatase HYG85_14360 PF11965 Domain of unknown function (DUF3479) HYG85_14365 PF01078 Magnesium chelatase, subunit ChlI HYG85_14365 PF17863 AAA lid domain HYG85_14370 PF17863 AAA lid domain HYG85_14370 PF01078 Magnesium chelatase, subunit ChlI HYG85_14370 PF13519 von Willebrand factor type A domain HYG85_14375 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_14380 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_14385 PF01547 Bacterial extracellular solute-binding protein HYG85_14400 PF13026 Protein of unknown function (DUF3887) HYG85_14400 PF12146 Serine aminopeptidase, S33 HYG85_14405 PF07685 CobB/CobQ-like glutamine amidotransferase domain HYG85_14405 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain HYG85_14410 PF03186 CobD/Cbib protein HYG85_14415 PF00155 Aminotransferase class I and II HYG85_14420 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase HYG85_14425 PF02654 Cobalamin-5-phosphate synthase HYG85_14440 PF00072 Response regulator receiver domain HYG85_14440 PF12833 Helix-turn-helix domain HYG85_14445 PF07694 5TMR of 5TMR-LYT HYG85_14445 PF06580 Histidine kinase HYG85_14450 PF01547 Bacterial extracellular solute-binding protein HYG85_14455 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_14460 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_14470 PF13199 Glycosyl hydrolase family 66 HYG85_14470 PF03422 Carbohydrate binding module (family 6) HYG85_14470 PF16990 Carbohydrate binding module (family 35) HYG85_14490 PF16326 ABC transporter C-terminal domain HYG85_14490 PF12848 ABC transporter HYG85_14490 PF00005 ABC transporter HYG85_14505 PF00082 Subtilase family HYG85_14525 PF05816 Toxic anion resistance protein (TelA) HYG85_14530 PF00392 Bacterial regulatory proteins, gntR family HYG85_14535 PF00005 ABC transporter HYG85_14550 PF16385 Domain of unknown function HYG85_14550 PF00884 Sulfatase HYG85_14555 PF12833 Helix-turn-helix domain HYG85_14560 PF01966 HD domain HYG85_14565 PF07085 DRTGG domain HYG85_14565 PF02833 DHHA2 domain HYG85_14565 PF01368 DHH family HYG85_14565 PF00571 CBS domain HYG85_14570 PF01966 HD domain HYG85_14575 PF03636 Glycosyl hydrolase family 65, N-terminal domain HYG85_14575 PF03633 Glycosyl hydrolase family 65, C-terminal domain HYG85_14575 PF03632 Glycosyl hydrolase family 65 central catalytic domain HYG85_14580 PF13361 UvrD-like helicase C-terminal domain HYG85_14580 PF00580 UvrD/REP helicase N-terminal domain HYG85_14585 PF00512 His Kinase A (phospho-acceptor) domain HYG85_14585 PF08448 PAS fold HYG85_14585 PF13188 PAS domain HYG85_14585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYG85_14585 PF00072 Response regulator receiver domain HYG85_14595 PF11975 Family 4 glycosyl hydrolase C-terminal domain HYG85_14595 PF02056 Family 4 glycosyl hydrolase HYG85_14600 PF12833 Helix-turn-helix domain HYG85_14600 PF02311 AraC-like ligand binding domain HYG85_14620 PF07992 Pyridine nucleotide-disulphide oxidoreductase HYG85_14625 PF08239 Bacterial SH3 domain HYG85_14625 PF01476 LysM domain HYG85_14625 PF00877 NlpC/P60 family HYG85_14640 PF02837 Glycosyl hydrolases family 2, sugar binding domain HYG85_14640 PF02836 Glycosyl hydrolases family 2, TIM barrel domain HYG85_14640 PF00703 Glycosyl hydrolases family 2 HYG85_14640 PF02929 Beta galactosidase small chain HYG85_14640 PF16353 Domain of unknown function(DUF4981) HYG85_14645 PF00664 ABC transporter transmembrane region HYG85_14645 PF00005 ABC transporter HYG85_14650 PF00664 ABC transporter transmembrane region HYG85_14650 PF00005 ABC transporter HYG85_14655 PF08459 UvrC Helix-hairpin-helix N-terminal HYG85_14655 PF02151 UvrB/uvrC motif HYG85_14655 PF01541 GIY-YIG catalytic domain HYG85_14655 PF12826 Helix-hairpin-helix motif HYG85_14660 PF02603 HPr Serine kinase N terminus HYG85_14660 PF07475 HPr Serine kinase C-terminal domain HYG85_14665 PF00480 ROK family HYG85_14675 PF07670 Nucleoside recognition HYG85_14675 PF02421 Ferrous iron transport protein B HYG85_14675 PF17910 FeoB cytosolic helical domain HYG85_14675 PF07664 Ferrous iron transport protein B C terminus HYG85_14685 PF02632 BioY family HYG85_14690 PF00202 Aminotransferase class-III HYG85_14700 PF00155 Aminotransferase class I and II HYG85_14705 PF00107 Zinc-binding dehydrogenase HYG85_14705 PF08240 Alcohol dehydrogenase GroES-like domain HYG85_14710 PF06968 Biotin and Thiamin Synthesis associated domain HYG85_14710 PF04055 Radical SAM superfamily HYG85_14715 PF00474 Sodium:solute symporter family HYG85_14720 PF00501 AMP-binding enzyme HYG85_14720 PF14535 AMP-binding enzyme C-terminal domain HYG85_14735 PF00501 AMP-binding enzyme HYG85_14735 PF14535 AMP-binding enzyme C-terminal domain HYG85_14745 PF00027 Cyclic nucleotide-binding domain HYG85_14745 PF13545 Crp-like helix-turn-helix domain HYG85_14755 PF02608 ABC transporter substrate-binding protein PnrA-like HYG85_14760 PF00005 ABC transporter HYG85_14765 PF02653 Branched-chain amino acid transport system / permease component HYG85_14770 PF02653 Branched-chain amino acid transport system / permease component HYG85_14775 PF01156 Inosine-uridine preferring nucleoside hydrolase HYG85_14780 PF01156 Inosine-uridine preferring nucleoside hydrolase HYG85_14785 PF00294 pfkB family carbohydrate kinase HYG85_14800 PF01048 Phosphorylase superfamily HYG85_14810 PF00294 pfkB family carbohydrate kinase HYG85_14815 PF04227 Indigoidine synthase A like protein HYG85_14830 PF17934 Tetracyclin repressor-like, C-terminal domain HYG85_14830 PF00440 Bacterial regulatory proteins, tetR family HYG85_14855 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HYG85_14860 PF01565 FAD binding domain HYG85_14860 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain HYG85_14865 PF03668 P-loop ATPase protein family HYG85_14870 PF01933 Uncharacterised protein family UPF0052 HYG85_14875 PF14527 WhiA LAGLIDADG-like domain HYG85_14875 PF02650 WhiA C-terminal HTH domain HYG85_14875 PF10298 WhiA N-terminal LAGLIDADG-like domain HYG85_14880 PF00381 PTS HPr component phosphorylation site HYG85_14895 PF01261 Xylose isomerase-like TIM barrel HYG85_14900 PF03816 Cell envelope-related transcriptional attenuator domain HYG85_14905 PF03816 Cell envelope-related transcriptional attenuator domain HYG85_14920 PF03023 Lipid II flippase MurJ HYG85_14925 PF00132 Bacterial transferase hexapeptide (six repeats) HYG85_14935 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain HYG85_14935 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain HYG85_14935 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HYG85_14975 PF03808 Glycosyl transferase WecB/TagA/CpsF family HYG85_14980 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) HYG85_14980 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 HYG85_14985 PF03459 TOBE domain HYG85_14985 PF17912 MalK OB fold domain HYG85_14985 PF00005 ABC transporter HYG85_14990 PF17853 GGDEF-like domain HYG85_14990 PF05651 Putative sugar diacid recognition HYG85_14990 PF13556 PucR C-terminal helix-turn-helix domain HYG85_14995 PF00005 ABC transporter HYG85_15000 PF02687 FtsX-like permease family HYG85_15000 PF18075 FtsX extracellular domain HYG85_15005 PF08525 Opacity-associated protein A N-terminal motif HYG85_15005 PF01476 LysM domain HYG85_15005 PF01551 Peptidase family M23 HYG85_15010 PF17820 PDZ domain HYG85_15010 PF03572 Peptidase family S41 HYG85_15010 PF01471 Putative peptidoglycan binding domain HYG85_15015 PF17820 PDZ domain HYG85_15020 PF01174 SNO glutamine amidotransferase family HYG85_15025 PF01680 SOR/SNZ family HYG85_15040 PF13732 Domain of unknown function (DUF4162) HYG85_15040 PF00005 ABC transporter HYG85_15060 PF17757 UvrB interaction domain HYG85_15060 PF12344 Ultra-violet resistance protein B HYG85_15060 PF02151 UvrB/uvrC motif HYG85_15060 PF04851 Type III restriction enzyme, res subunit HYG85_15060 PF00271 Helicase conserved C-terminal domain HYG85_15065 PF17755 UvrA DNA-binding domain HYG85_15065 PF17760 UvrA interaction domain HYG85_15085 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region HYG85_15085 PF00037 4Fe-4S binding domain HYG85_15085 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit HYG85_15090 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region HYG85_15090 PF00037 4Fe-4S binding domain HYG85_15090 PF02256 Iron hydrogenase small subunit HYG85_15090 PF02906 Iron only hydrogenase large subunit, C-terminal domain HYG85_15095 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus HYG85_15095 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein HYG85_15115 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_15120 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_15125 PF13416 Bacterial extracellular solute-binding protein HYG85_15130 PF07470 Glycosyl Hydrolase Family 88 HYG85_15145 PF01043 SecA preprotein cross-linking domain HYG85_15145 PF07517 SecA DEAD-like domain HYG85_15145 PF07516 SecA Wing and Scaffold domain HYG85_15145 PF02810 SEC-C motif HYG85_15155 PF01584 CheW-like domain HYG85_15165 PF01842 ACT domain HYG85_15165 PF00742 Homoserine dehydrogenase HYG85_15165 PF03447 Homoserine dehydrogenase, NAD binding domain HYG85_15170 PF01676 Metalloenzyme superfamily HYG85_15170 PF10143 2,3-bisphosphoglycerate-independent phosphoglycerate mutase HYG85_15175 PF13840 ACT domain HYG85_15175 PF00696 Amino acid kinase family HYG85_15180 PF16921 Tex protein YqgF-like domain HYG85_15180 PF09371 Tex-like protein N-terminal domain HYG85_15180 PF00575 S1 RNA binding domain HYG85_15180 PF17674 HHH domain HYG85_15195 PF00990 Diguanylate cyclase, GGDEF domain HYG85_15195 PF08448 PAS fold HYG85_15220 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV HYG85_15225 PF12822 ECF transporter, substrate-specific component HYG85_15235 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE HYG85_15240 PF00814 Glycoprotease family HYG85_15245 PF00583 Acetyltransferase (GNAT) family HYG85_15255 PF05362 Lon protease (S16) C-terminal proteolytic domain HYG85_15255 PF13654 AAA domain HYG85_15260 PF02779 Transketolase, pyrimidine binding domain HYG85_15260 PF02780 Transketolase, C-terminal domain HYG85_15260 PF00456 Transketolase, thiamine diphosphate binding domain HYG85_15270 PF00753 Metallo-beta-lactamase superfamily HYG85_15280 PF00814 Glycoprotease family HYG85_15285 PF00210 Ferritin-like domain HYG85_15290 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase HYG85_15400 PF00535 Glycosyl transferase family 2 HYG85_15405 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HYG85_15405 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HYG85_15410 PF00132 Bacterial transferase hexapeptide (six repeats) HYG85_15415 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family HYG85_15435 PF00483 Nucleotidyl transferase HYG85_15440 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase HYG85_15445 PF16363 GDP-mannose 4,6 dehydratase HYG85_15460 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family HYG85_15470 PF04321 RmlD substrate binding domain HYG85_15490 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain HYG85_15490 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain HYG85_15490 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HYG85_15505 PF00535 Glycosyl transferase family 2 HYG85_15520 PF00535 Glycosyl transferase family 2 HYG85_15520 PF13181 Tetratricopeptide repeat HYG85_15525 PF00534 Glycosyl transferases group 1 HYG85_15525 PF13477 Glycosyl transferase 4-like HYG85_15530 PF01370 NAD dependent epimerase/dehydratase family HYG85_15535 PF01476 LysM domain HYG85_15560 PF00781 Diacylglycerol kinase catalytic domain HYG85_15580 PF12705 PD-(D/E)XK nuclease superfamily HYG85_15595 PF01496 V-type ATPase 116kDa subunit family HYG85_15615 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HYG85_15615 PF02874 ATP synthase alpha/beta family, beta-barrel domain HYG85_15615 PF16886 ATPsynthase alpha/beta subunit N-term extension HYG85_15620 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HYG85_15620 PF02874 ATP synthase alpha/beta family, beta-barrel domain HYG85_15625 PF01813 ATP synthase subunit D HYG85_15630 PF12705 PD-(D/E)XK nuclease superfamily HYG85_15630 PF00580 UvrD/REP helicase N-terminal domain HYG85_15630 PF13361 UvrD-like helicase C-terminal domain HYG85_15640 PF12833 Helix-turn-helix domain HYG85_15640 PF10114 Sensory domain found in PocR HYG85_15645 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HYG85_15645 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HYG85_15660 PF13649 Methyltransferase domain HYG85_15665 PF01430 Hsp33 protein HYG85_15675 PF01814 Hemerythrin HHE cation binding domain HYG85_15680 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HYG85_15680 PF02824 TGS domain HYG85_15680 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HYG85_15680 PF03129 Anticodon binding domain HYG85_15685 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HYG85_15685 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HYG85_15685 PF02824 TGS domain HYG85_15685 PF03129 Anticodon binding domain HYG85_15690 PF05198 Translation initiation factor IF-3, N-terminal domain HYG85_15690 PF00707 Translation initiation factor IF-3, C-terminal domain HYG85_15695 PF01632 Ribosomal protein L35 HYG85_15700 PF00453 Ribosomal protein L20 HYG85_15705 PF02557 D-alanyl-D-alanine carboxypeptidase HYG85_15715 PF08239 Bacterial SH3 domain HYG85_15715 PF01520 N-acetylmuramoyl-L-alanine amidase HYG85_15720 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase HYG85_15720 PF14572 Phosphoribosyl synthetase-associated domain HYG85_15725 PF02463 RecF/RecN/SMC N terminal domain HYG85_15785 PF06445 GyrI-like small molecule binding domain HYG85_15785 PF12833 Helix-turn-helix domain HYG85_15815 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HYG85_15815 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HYG85_15820 PF02913 FAD linked oxidases, C-terminal domain HYG85_15820 PF01565 FAD binding domain HYG85_15825 PF02659 Putative manganese efflux pump HYG85_15830 PF00664 ABC transporter transmembrane region HYG85_15830 PF00005 ABC transporter HYG85_15850 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HYG85_15850 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HYG85_15860 PF01547 Bacterial extracellular solute-binding protein HYG85_15865 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_15870 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_15875 PF00232 Glycosyl hydrolase family 1 HYG85_15880 PF00356 Bacterial regulatory proteins, lacI family HYG85_15885 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain HYG85_15885 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain HYG85_15920 PF12002 MgsA AAA+ ATPase C terminal HYG85_15920 PF05496 Holliday junction DNA helicase RuvB P-loop domain HYG85_15920 PF16193 AAA C-terminal domain HYG85_15925 PF01497 Periplasmic binding protein HYG85_15930 PF01032 FecCD transport family HYG85_15935 PF00005 ABC transporter HYG85_15950 PF00746 LPXTG cell wall anchor motif HYG85_15950 PF00082 Subtilase family HYG85_15950 PF02225 PA domain HYG85_15950 PF06280 Fn3-like domain HYG85_15955 PF00072 Response regulator receiver domain HYG85_15955 PF00196 Bacterial regulatory proteins, luxR family HYG85_15965 PF00963 Cohesin domain HYG85_15965 PF00395 S-layer homology domain HYG85_16000 PF16360 GTP-binding GTPase Middle Region HYG85_16000 PF13167 GTP-binding GTPase N-terminal HYG85_16000 PF01926 50S ribosome-binding GTPase HYG85_16005 PF13597 Anaerobic ribonucleoside-triphosphate reductase HYG85_16005 PF03477 ATP cone domain HYG85_16010 PF00303 Thymidylate synthase HYG85_16015 PF00186 Dihydrofolate reductase HYG85_16065 PF00570 HRDC domain HYG85_16065 PF00271 Helicase conserved C-terminal domain HYG85_16065 PF00270 DEAD/DEAH box helicase HYG85_16065 PF16124 RecQ zinc-binding HYG85_16065 PF09382 RQC domain HYG85_16070 PF03551 Transcriptional regulator PadR-like family HYG85_16090 PF00005 ABC transporter HYG85_16090 PF00664 ABC transporter transmembrane region HYG85_16095 PF00005 ABC transporter HYG85_16095 PF00664 ABC transporter transmembrane region HYG85_16130 PF00480 ROK family HYG85_16140 PF01116 Fructose-bisphosphate aldolase class-II HYG85_16150 PF00072 Response regulator receiver domain HYG85_16150 PF00486 Transcriptional regulatory protein, C terminal HYG85_16155 PF00672 HAMP domain HYG85_16155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYG85_16155 PF00512 His Kinase A (phospho-acceptor) domain HYG85_16160 PF02308 MgtC family HYG85_16165 PF01547 Bacterial extracellular solute-binding protein HYG85_16170 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_16175 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_16180 PF07470 Glycosyl Hydrolase Family 88 HYG85_16185 PF00884 Sulfatase HYG85_16185 PF12411 Choline sulfatase enzyme C terminal HYG85_16190 PF12411 Choline sulfatase enzyme C terminal HYG85_16190 PF00884 Sulfatase HYG85_16195 PF12833 Helix-turn-helix domain HYG85_16205 PF00679 Elongation factor G C-terminus HYG85_16205 PF14492 Elongation Factor G, domain II HYG85_16205 PF03764 Elongation factor G, domain IV HYG85_16205 PF00009 Elongation factor Tu GTP binding domain HYG85_16210 PF16874 Glycosyl hydrolase family 36 C-terminal domain HYG85_16210 PF16875 Glycosyl hydrolase family 36 N-terminal domain HYG85_16225 PF12833 Helix-turn-helix domain HYG85_16240 PF00005 ABC transporter HYG85_16245 PF04954 Siderophore-interacting protein HYG85_16245 PF00664 ABC transporter transmembrane region HYG85_16245 PF00005 ABC transporter HYG85_16245 PF08021 Siderophore-interacting FAD-binding domain HYG85_16250 PF00664 ABC transporter transmembrane region HYG85_16250 PF00005 ABC transporter HYG85_16255 PF03734 L,D-transpeptidase catalytic domain HYG85_16255 PF01476 LysM domain HYG85_16265 PF00248 Aldo/keto reductase family HYG85_16280 PF00356 Bacterial regulatory proteins, lacI family HYG85_16285 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HYG85_16285 PF00672 HAMP domain HYG85_16285 PF05227 CHASE3 domain HYG85_16295 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_16300 PF00005 ABC transporter HYG85_16305 PF00440 Bacterial regulatory proteins, tetR family HYG85_16315 PF00356 Bacterial regulatory proteins, lacI family HYG85_16320 PF13382 Adenine deaminase C-terminal domain HYG85_16320 PF01979 Amidohydrolase family HYG85_16325 PF01979 Amidohydrolase family HYG85_16325 PF13382 Adenine deaminase C-terminal domain HYG85_16335 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HYG85_16335 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HYG85_16340 PF00392 Bacterial regulatory proteins, gntR family HYG85_16360 PF05504 Spore germination B3/ GerAC like, C-terminal HYG85_16365 PF03323 Bacillus/Clostridium GerA spore germination protein HYG85_16370 PF01547 Bacterial extracellular solute-binding protein HYG85_16375 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_16380 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_16395 PF12833 Helix-turn-helix domain HYG85_16400 PF04324 BFD-like [2Fe-2S] binding domain HYG85_16400 PF18267 Rubredoxin NAD+ reductase C-terminal domain HYG85_16400 PF07992 Pyridine nucleotide-disulphide oxidoreductase HYG85_16400 PF01077 Nitrite and sulphite reductase 4Fe-4S domain HYG85_16400 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain HYG85_16405 PF00488 MutS domain V HYG85_16405 PF05190 MutS family domain IV HYG85_16405 PF05192 MutS domain III HYG85_16405 PF05188 MutS domain II HYG85_16405 PF01624 MutS domain I HYG85_16410 PF01624 MutS domain I HYG85_16410 PF05192 MutS domain III HYG85_16410 PF05190 MutS family domain IV HYG85_16410 PF00488 MutS domain V HYG85_16410 PF05188 MutS domain II HYG85_16415 PF01169 Uncharacterized protein family UPF0016 HYG85_16435 PF12833 Helix-turn-helix domain HYG85_16435 PF02311 AraC-like ligand binding domain HYG85_16445 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_16450 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_16455 PF16990 Carbohydrate binding module (family 35) HYG85_16455 PF03422 Carbohydrate binding module (family 6) HYG85_16455 PF13199 Glycosyl hydrolase family 66 HYG85_16515 PF13411 MerR HTH family regulatory protein HYG85_16515 PF06445 GyrI-like small molecule binding domain HYG85_16520 PF12704 MacB-like periplasmic core domain HYG85_16520 PF02687 FtsX-like permease family HYG85_16520 PF00005 ABC transporter HYG85_16530 PF00072 Response regulator receiver domain HYG85_16530 PF00486 Transcriptional regulatory protein, C terminal HYG85_16535 PF00989 PAS fold HYG85_16535 PF00512 His Kinase A (phospho-acceptor) domain HYG85_16535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYG85_16535 PF16736 Single Cache-like HYG85_16550 PF16347 Domain of unknown function (DUF4976) HYG85_16550 PF00884 Sulfatase HYG85_16555 PF12833 Helix-turn-helix domain HYG85_16565 PF00005 ABC transporter HYG85_16570 PF02653 Branched-chain amino acid transport system / permease component HYG85_16585 PF00072 Response regulator receiver domain HYG85_16585 PF00196 Bacterial regulatory proteins, luxR family HYG85_16590 PF02743 Cache domain HYG85_16590 PF00672 HAMP domain HYG85_16590 PF06580 Histidine kinase HYG85_16590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYG85_16600 PF11799 impB/mucB/samB family C-terminal domain HYG85_16600 PF00817 impB/mucB/samB family HYG85_16605 PF01063 Amino-transferase class IV HYG85_16640 PF13382 Adenine deaminase C-terminal domain HYG85_16640 PF01979 Amidohydrolase family HYG85_16655 PF04734 Neutral/alkaline non-lysosomal ceramidase, N-terminal HYG85_16655 PF17048 Neutral/alkaline non-lysosomal ceramidase, C-terminal HYG85_16660 PF04954 Siderophore-interacting protein HYG85_16660 PF08021 Siderophore-interacting FAD-binding domain HYG85_16660 PF00005 ABC transporter HYG85_16660 PF00664 ABC transporter transmembrane region HYG85_16665 PF00664 ABC transporter transmembrane region HYG85_16665 PF00005 ABC transporter HYG85_16675 PF00005 ABC transporter HYG85_16695 PF00668 Condensation domain HYG85_16695 PF13193 AMP-binding enzyme C-terminal domain HYG85_16695 PF00501 AMP-binding enzyme HYG85_16695 PF00550 Phosphopantetheine attachment site HYG85_16700 PF00891 O-methyltransferase domain HYG85_16705 PF13193 AMP-binding enzyme C-terminal domain HYG85_16705 PF00501 AMP-binding enzyme HYG85_16710 PF00501 AMP-binding enzyme HYG85_16710 PF00668 Condensation domain HYG85_16710 PF13193 AMP-binding enzyme C-terminal domain HYG85_16710 PF00550 Phosphopantetheine attachment site HYG85_16720 PF00793 DAHP synthetase I family HYG85_16720 PF18152 DAHP synthase ferredoxin-like domain HYG85_16725 PF00425 chorismate binding enzyme HYG85_16730 PF16582 Middle domain of thiamine pyrophosphate HYG85_16730 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HYG85_16730 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HYG85_16735 PF00561 alpha/beta hydrolase fold HYG85_16740 PF00378 Enoyl-CoA hydratase/isomerase HYG85_16745 PF00501 AMP-binding enzyme HYG85_16745 PF13193 AMP-binding enzyme C-terminal domain HYG85_16750 PF13378 Enolase C-terminal domain-like HYG85_16750 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain HYG85_16760 PF00975 Thioesterase domain HYG85_16775 PF01325 Iron dependent repressor, N-terminal DNA binding domain HYG85_16775 PF00480 ROK family HYG85_16780 PF01979 Amidohydrolase family HYG85_16785 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase HYG85_16805 PF07687 Peptidase dimerisation domain HYG85_16805 PF01546 Peptidase family M20/M25/M40 HYG85_16810 PF00595 PDZ domain HYG85_16810 PF03572 Peptidase family S41 HYG85_16820 PF02687 FtsX-like permease family HYG85_16820 PF12704 MacB-like periplasmic core domain HYG85_16830 PF00005 ABC transporter HYG85_16840 PF00899 ThiF family HYG85_16845 PF04055 Radical SAM superfamily HYG85_16845 PF06968 Biotin and Thiamin Synthesis associated domain HYG85_16850 PF01476 LysM domain HYG85_16850 PF00704 Glycosyl hydrolases family 18 HYG85_16870 PF00005 ABC transporter HYG85_16875 PF00005 ABC transporter HYG85_16880 PF05504 Spore germination B3/ GerAC like, C-terminal HYG85_16885 PF03323 Bacillus/Clostridium GerA spore germination protein HYG85_16895 PF03845 Spore germination protein HYG85_16920 PF00155 Aminotransferase class I and II HYG85_16920 PF00392 Bacterial regulatory proteins, gntR family HYG85_16940 PF00672 HAMP domain HYG85_16940 PF02743 Cache domain HYG85_16940 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HYG85_16945 PF00291 Pyridoxal-phosphate dependent enzyme HYG85_16950 PF00579 tRNA synthetases class I (W and Y) HYG85_16955 PF00072 Response regulator receiver domain HYG85_16955 PF12833 Helix-turn-helix domain HYG85_16960 PF02743 Cache domain HYG85_16960 PF00672 HAMP domain HYG85_16960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYG85_16960 PF06580 Histidine kinase HYG85_16965 PF13407 Periplasmic binding protein domain HYG85_16970 PF00005 ABC transporter HYG85_16975 PF02653 Branched-chain amino acid transport system / permease component HYG85_16985 PF01569 PAP2 superfamily HYG85_17000 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain HYG85_17000 PF02222 ATP-grasp domain HYG85_17005 PF00731 AIR carboxylase HYG85_17010 PF01259 SAICAR synthetase HYG85_17015 PF00156 Phosphoribosyl transferase domain HYG85_17020 PF00586 AIR synthase related protein, N-terminal domain HYG85_17020 PF02769 AIR synthase related protein, C-terminal domain HYG85_17025 PF00551 Formyl transferase HYG85_17030 PF02843 Phosphoribosylglycinamide synthetase, C domain HYG85_17030 PF02844 Phosphoribosylglycinamide synthetase, N domain HYG85_17030 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain HYG85_17040 PF02645 Uncharacterised protein, DegV family COG1307 HYG85_17050 PF01477 PLAT/LH2 domain HYG85_17050 PF00882 Zinc dependent phospholipase C HYG85_17060 PF00356 Bacterial regulatory proteins, lacI family HYG85_17065 PF05025 RbsD / FucU transport protein family HYG85_17070 PF03437 BtpA family HYG85_17075 PF00294 pfkB family carbohydrate kinase HYG85_17080 PF00005 ABC transporter HYG85_17085 PF02653 Branched-chain amino acid transport system / permease component HYG85_17090 PF13407 Periplasmic binding protein domain HYG85_17095 PF09515 Thiamine transporter protein (Thia_YuaJ) HYG85_17105 PF02683 Cytochrome C biogenesis protein transmembrane region HYG85_17110 PF08534 Redoxin HYG85_17115 PF02151 UvrB/uvrC motif HYG85_17120 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain HYG85_17125 PF10431 C-terminal, D2-small domain, of ClpB protein HYG85_17125 PF02861 Clp amino terminal domain, pathogenicity island component HYG85_17125 PF17871 AAA lid domain HYG85_17125 PF07724 AAA domain (Cdc48 subfamily) HYG85_17125 PF00004 ATPase family associated with various cellular activities (AAA) HYG85_17135 PF00953 Glycosyl transferase family 4 HYG85_17140 PF18073 Rubredoxin metal binding domain HYG85_17150 PF01432 Peptidase family M3 HYG85_17150 PF08439 Oligopeptidase F HYG85_17160 PF01546 Peptidase family M20/M25/M40 HYG85_17160 PF07687 Peptidase dimerisation domain HYG85_17165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HYG85_17165 PF03466 LysR substrate binding domain HYG85_17170 PF02769 AIR synthase related protein, C-terminal domain HYG85_17170 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain HYG85_17170 PF00586 AIR synthase related protein, N-terminal domain HYG85_17175 PF00882 Zinc dependent phospholipase C HYG85_17175 PF01477 PLAT/LH2 domain HYG85_17180 PF14602 Hexapeptide repeat of succinyl-transferase HYG85_17180 PF12464 Maltose acetyltransferase HYG85_17185 PF00543 Nitrogen regulatory protein P-II HYG85_17190 PF00909 Ammonium Transporter Family HYG85_17205 PF00005 ABC transporter HYG85_17210 PF01032 FecCD transport family HYG85_17215 PF01497 Periplasmic binding protein HYG85_17220 PF06180 Cobalt chelatase (CbiK) HYG85_17225 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain HYG85_17225 PF07685 CobB/CobQ-like glutamine amidotransferase domain HYG85_17230 PF02570 Precorrin-8X methylmutase HYG85_17235 PF01888 CbiD HYG85_17245 PF05175 Methyltransferase small domain HYG85_17250 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HYG85_17255 PF01077 Nitrite and sulphite reductase 4Fe-4S domain HYG85_17255 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HYG85_17260 PF02571 Precorrin-6x reductase CbiJ/CobK HYG85_17265 PF11760 Cobalamin synthesis G N-terminal HYG85_17265 PF11761 Cobalamin biosynthesis central region HYG85_17265 PF01890 Cobalamin synthesis G C-terminus HYG85_17270 PF12557 Cob(I)alamin adenosyltransferase N terminal HYG85_17270 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP HYG85_17275 PF01209 ubiE/COQ5 methyltransferase family HYG85_17295 PF03062 MBOAT, membrane-bound O-acyltransferase family HYG85_17335 PF05402 Coenzyme PQQ synthesis protein D (PqqD) HYG85_17335 PF04055 Radical SAM superfamily HYG85_17335 PF13186 Iron-sulfur cluster-binding domain HYG85_17340 PF06463 Molybdenum Cofactor Synthesis C HYG85_17340 PF04055 Radical SAM superfamily HYG85_17345 PF00005 ABC transporter HYG85_17350 PF00005 ABC transporter HYG85_17355 PF13416 Bacterial extracellular solute-binding protein HYG85_17360 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_17365 PF00005 ABC transporter HYG85_17365 PF17845 FbpC C-terminal regulatory nucleotide binding domain HYG85_17375 PF04545 Sigma-70, region 4 HYG85_17460 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_17465 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_17470 PF13580 SIS domain HYG85_17475 PF01915 Glycosyl hydrolase family 3 C-terminal domain HYG85_17475 PF00933 Glycosyl hydrolase family 3 N terminal domain HYG85_17485 PF00905 Penicillin binding protein transpeptidase domain HYG85_17485 PF00912 Transglycosylase HYG85_17490 PF01546 Peptidase family M20/M25/M40 HYG85_17490 PF07687 Peptidase dimerisation domain HYG85_17510 PF05857 TraX protein HYG85_17520 PF06508 Queuosine biosynthesis protein QueC HYG85_17525 PF01227 GTP cyclohydrolase I HYG85_17530 PF04055 Radical SAM superfamily HYG85_17535 PF01242 6-pyruvoyl tetrahydropterin synthase HYG85_17540 PF01869 BadF/BadG/BcrA/BcrD ATPase family HYG85_17565 PF00579 tRNA synthetases class I (W and Y) HYG85_17580 PF01636 Phosphotransferase enzyme family HYG85_17585 PF13439 Glycosyltransferase Family 4 HYG85_17585 PF00534 Glycosyl transferases group 1 HYG85_17590 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain HYG85_17590 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HYG85_17590 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain HYG85_17600 PF01594 AI-2E family transporter HYG85_17605 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HYG85_17605 PF07992 Pyridine nucleotide-disulphide oxidoreductase HYG85_17610 PF01209 ubiE/COQ5 methyltransferase family HYG85_17615 PF00881 Nitroreductase family HYG85_17620 PF06445 GyrI-like small molecule binding domain HYG85_17620 PF13411 MerR HTH family regulatory protein HYG85_17640 PF12390 Selenocysteine synthase N terminal HYG85_17640 PF03841 L-seryl-tRNA selenium transferase HYG85_17650 PF00009 Elongation factor Tu GTP binding domain HYG85_17650 PF03144 Elongation factor Tu domain 2 HYG85_17650 PF09105 Elongation factor SelB, winged helix HYG85_17650 PF09106 Elongation factor SelB, winged helix HYG85_17650 PF09107 Elongation factor SelB, winged helix HYG85_17655 PF01575 MaoC like domain HYG85_17660 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HYG85_17660 PF02770 Acyl-CoA dehydrogenase, middle domain HYG85_17660 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HYG85_17665 PF01012 Electron transfer flavoprotein domain HYG85_17670 PF01012 Electron transfer flavoprotein domain HYG85_17670 PF00766 Electron transfer flavoprotein FAD-binding domain HYG85_17675 PF02743 Cache domain HYG85_17675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYG85_17675 PF06580 Histidine kinase HYG85_17675 PF00672 HAMP domain HYG85_17680 PF00072 Response regulator receiver domain HYG85_17680 PF12833 Helix-turn-helix domain HYG85_17685 PF01547 Bacterial extracellular solute-binding protein HYG85_17690 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_17695 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_17700 PF00005 ABC transporter HYG85_17700 PF17912 MalK OB fold domain HYG85_17700 PF03459 TOBE domain HYG85_17705 PF00005 ABC transporter HYG85_17705 PF17912 MalK OB fold domain HYG85_17705 PF03459 TOBE domain HYG85_17710 PF08240 Alcohol dehydrogenase GroES-like domain HYG85_17710 PF00107 Zinc-binding dehydrogenase HYG85_17715 PF02502 Ribose/Galactose Isomerase HYG85_17720 PF02733 Dak1 domain HYG85_17725 PF02734 DAK2 domain HYG85_17730 PF00365 Phosphofructokinase HYG85_17740 PF00696 Amino acid kinase family HYG85_17745 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD HYG85_17750 PF05685 Putative restriction endonuclease HYG85_17775 PF01547 Bacterial extracellular solute-binding protein HYG85_17790 PF02585 GlcNAc-PI de-N-acetylase HYG85_17795 PF07726 ATPase family associated with various cellular activities (AAA) HYG85_17795 PF17863 AAA lid domain HYG85_17805 PF11992 Domain of unknown function (DUF3488) HYG85_17805 PF13559 Domain of unknown function (DUF4129) HYG85_17805 PF01841 Transglutaminase-like superfamily HYG85_17810 PF08281 Sigma-70, region 4 HYG85_17810 PF04542 Sigma-70 region 2 HYG85_17835 PF04542 Sigma-70 region 2 HYG85_17840 PF12791 Anti-sigma factor N-terminus HYG85_17850 PF00005 ABC transporter HYG85_17850 PF13732 Domain of unknown function (DUF4162) HYG85_17865 PF13380 CoA binding domain HYG85_17875 PF00302 Chloramphenicol acetyltransferase HYG85_17890 PF17932 Tetracyclin repressor-like, C-terminal domain HYG85_17890 PF00440 Bacterial regulatory proteins, tetR family HYG85_17900 PF00873 AcrB/AcrD/AcrF family HYG85_17925 PF02492 CobW/HypB/UreG, nucleotide-binding domain HYG85_17930 PF00005 ABC transporter HYG85_17930 PF08402 TOBE domain HYG85_17935 PF02673 Bacitracin resistance protein BacA HYG85_17970 PF03063 Prismane/CO dehydrogenase family HYG85_17975 PF04324 BFD-like [2Fe-2S] binding domain HYG85_17975 PF01266 FAD dependent oxidoreductase HYG85_17980 PF04324 BFD-like [2Fe-2S] binding domain HYG85_17980 PF07992 Pyridine nucleotide-disulphide oxidoreductase HYG85_17990 PF16347 Domain of unknown function (DUF4976) HYG85_17990 PF00884 Sulfatase HYG85_17995 PF00313 'Cold-shock' DNA-binding domain HYG85_18000 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster HYG85_18000 PF07992 Pyridine nucleotide-disulphide oxidoreductase HYG85_18005 PF04898 Glutamate synthase central domain HYG85_18005 PF01493 GXGXG motif HYG85_18005 PF01645 Conserved region in glutamate synthase HYG85_18005 PF00310 Glutamine amidotransferases class-II HYG85_18020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYG85_18020 PF06580 Histidine kinase HYG85_18020 PF00672 HAMP domain HYG85_18020 PF02743 Cache domain HYG85_18025 PF00072 Response regulator receiver domain HYG85_18025 PF12833 Helix-turn-helix domain HYG85_18030 PF00005 ABC transporter HYG85_18035 PF02653 Branched-chain amino acid transport system / permease component HYG85_18045 PF00107 Zinc-binding dehydrogenase HYG85_18045 PF08240 Alcohol dehydrogenase GroES-like domain HYG85_18050 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HYG85_18050 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HYG85_18060 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal HYG85_18060 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III HYG85_18065 PF03631 Virulence factor BrkB HYG85_18075 PF04041 beta-1,4-mannooligosaccharide phosphorylase HYG85_18080 PF12833 Helix-turn-helix domain HYG85_18080 PF00072 Response regulator receiver domain HYG85_18085 PF00672 HAMP domain HYG85_18085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYG85_18085 PF06580 Histidine kinase HYG85_18085 PF02743 Cache domain HYG85_18095 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_18100 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_18105 PF12010 Domain of unknown function (DUF3502) HYG85_18110 PF01915 Glycosyl hydrolase family 3 C-terminal domain HYG85_18110 PF14310 Fibronectin type III-like domain HYG85_18110 PF00933 Glycosyl hydrolase family 3 N terminal domain HYG85_18115 PF17189 Glycosyl hydrolase family 30 beta sandwich domain HYG85_18120 PF00291 Pyridoxal-phosphate dependent enzyme HYG85_18125 PF02082 Transcriptional regulator HYG85_18130 PF00293 NUDIX domain HYG85_18135 PF02522 Aminoglycoside 3-N-acetyltransferase HYG85_18140 PF00205 Thiamine pyrophosphate enzyme, central domain HYG85_18140 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HYG85_18140 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HYG85_18155 PF00005 ABC transporter HYG85_18160 PF00392 Bacterial regulatory proteins, gntR family HYG85_18165 PF00005 ABC transporter HYG85_18170 PF02687 FtsX-like permease family HYG85_18175 PF12848 ABC transporter HYG85_18175 PF00005 ABC transporter HYG85_18195 PF00072 Response regulator receiver domain HYG85_18195 PF00486 Transcriptional regulatory protein, C terminal HYG85_18200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYG85_18205 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain HYG85_18205 PF01409 tRNA synthetases class II core domain (F) HYG85_18210 PF03147 Ferredoxin-fold anticodon binding domain HYG85_18210 PF03483 B3/4 domain HYG85_18210 PF01588 Putative tRNA binding domain HYG85_18210 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain HYG85_18210 PF03484 tRNA synthetase B5 domain HYG85_18215 PF00497 Bacterial extracellular solute-binding proteins, family 3 HYG85_18220 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_18225 PF00005 ABC transporter HYG85_18230 PF08486 Stage II sporulation protein HYG85_18235 PF02547 Queuosine biosynthesis protein HYG85_18240 PF07724 AAA domain (Cdc48 subfamily) HYG85_18240 PF10431 C-terminal, D2-small domain, of ClpB protein HYG85_18240 PF02861 Clp amino terminal domain, pathogenicity island component HYG85_18240 PF00004 ATPase family associated with various cellular activities (AAA) HYG85_18240 PF17871 AAA lid domain HYG85_18245 PF02082 Transcriptional regulator HYG85_18250 PF00266 Aminotransferase class-V HYG85_18255 PF01592 NifU-like N terminal domain HYG85_18265 PF01734 Patatin-like phospholipase HYG85_18270 PF02811 PHP domain HYG85_18275 PF02690 Na+/Pi-cotransporter HYG85_18280 PF04198 Putative sugar-binding domain HYG85_18285 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HYG85_18285 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HYG85_18290 PF00162 Phosphoglycerate kinase HYG85_18295 PF00121 Triosephosphate isomerase HYG85_18300 PF06415 BPG-independent PGAM N-terminus (iPGM_N) HYG85_18300 PF01676 Metalloenzyme superfamily HYG85_18305 PF00113 Enolase, C-terminal TIM barrel domain HYG85_18305 PF03952 Enolase, N-terminal domain HYG85_18320 PF00773 RNB domain HYG85_18320 PF17876 Cold shock domain HYG85_18320 PF08206 Ribonuclease B OB domain HYG85_18320 PF00575 S1 RNA binding domain HYG85_18325 PF01668 SmpB protein HYG85_18335 PF00551 Formyl transferase HYG85_18335 PF02911 Formyl transferase, C-terminal domain HYG85_18355 PF00893 Small Multidrug Resistance protein HYG85_18360 PF13977 BetI-type transcriptional repressor, C-terminal HYG85_18360 PF00440 Bacterial regulatory proteins, tetR family HYG85_18365 PF08386 TAP-like protein HYG85_18365 PF00561 alpha/beta hydrolase fold HYG85_18375 PF02633 Creatinine amidohydrolase HYG85_18435 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_18440 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_18445 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain HYG85_18450 PF00356 Bacterial regulatory proteins, lacI family HYG85_18455 PF01915 Glycosyl hydrolase family 3 C-terminal domain HYG85_18455 PF00933 Glycosyl hydrolase family 3 N terminal domain HYG85_18455 PF14310 Fibronectin type III-like domain HYG85_18490 PF07690 Major Facilitator Superfamily HYG85_18495 PF01521 Iron-sulphur cluster biosynthesis HYG85_18495 PF01106 NifU-like domain HYG85_18500 PF07702 UTRA domain HYG85_18500 PF00392 Bacterial regulatory proteins, gntR family HYG85_18510 PF03061 Thioesterase superfamily HYG85_18515 PF05853 beta-keto acid cleavage enzyme HYG85_18520 PF01144 Coenzyme A transferase HYG85_18525 PF01144 Coenzyme A transferase HYG85_18535 PF12544 Lysine-2,3-aminomutase HYG85_18535 PF04055 Radical SAM superfamily HYG85_18545 PF00488 MutS domain V HYG85_18545 PF01713 Smr domain HYG85_18550 PF09043 D-Lysine 5,6-aminomutase TIM-barrel domain of alpha subunit HYG85_18555 PF02310 B12 binding domain HYG85_18555 PF16554 Dimerisation domain of d-ornithine 4,5-aminomutase HYG85_18565 PF12833 Helix-turn-helix domain HYG85_18575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYG85_18575 PF06580 Histidine kinase HYG85_18575 PF00672 HAMP domain HYG85_18575 PF02743 Cache domain HYG85_18580 PF00072 Response regulator receiver domain HYG85_18580 PF12833 Helix-turn-helix domain HYG85_18590 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_18595 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_18610 PF00221 Aromatic amino acid lyase HYG85_18615 PF17391 Urocanase N-terminal domain HYG85_18615 PF17392 Urocanase C-terminal domain HYG85_18615 PF01175 Urocanase Rossmann-like domain HYG85_18620 PF07837 Formiminotransferase domain, N-terminal subdomain HYG85_18620 PF02971 Formiminotransferase domain HYG85_18625 PF01979 Amidohydrolase family HYG85_18630 PF04961 Formiminotransferase-cyclodeaminase HYG85_18635 PF00990 Diguanylate cyclase, GGDEF domain HYG85_18635 PF00072 Response regulator receiver domain HYG85_18645 PF00356 Bacterial regulatory proteins, lacI family HYG85_18650 PF00196 Bacterial regulatory proteins, luxR family HYG85_18650 PF00072 Response regulator receiver domain HYG85_18655 PF06580 Histidine kinase HYG85_18655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYG85_18655 PF00672 HAMP domain HYG85_18655 PF02743 Cache domain HYG85_18665 PF00005 ABC transporter HYG85_18670 PF02653 Branched-chain amino acid transport system / permease component HYG85_18675 PF13407 Periplasmic binding protein domain HYG85_18685 PF00480 ROK family HYG85_18690 PF12833 Helix-turn-helix domain HYG85_18690 PF00072 Response regulator receiver domain HYG85_18695 PF06580 Histidine kinase HYG85_18695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYG85_18695 PF00672 HAMP domain HYG85_18695 PF02743 Cache domain HYG85_18700 PF00005 ABC transporter HYG85_18705 PF02653 Branched-chain amino acid transport system / permease component HYG85_18720 PF00356 Bacterial regulatory proteins, lacI family HYG85_18725 PF00294 pfkB family carbohydrate kinase HYG85_18730 PF00171 Aldehyde dehydrogenase family HYG85_18735 PF01116 Fructose-bisphosphate aldolase class-II HYG85_18745 PF00205 Thiamine pyrophosphate enzyme, central domain HYG85_18745 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HYG85_18745 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HYG85_18750 PF01261 Xylose isomerase-like TIM barrel HYG85_18755 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HYG85_18755 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HYG85_18760 PF01039 Carboxyl transferase domain HYG85_18765 PF00005 ABC transporter HYG85_18775 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HYG85_18780 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_18785 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_18785 PF12911 N-terminal TM domain of oligopeptide transport permease C HYG85_18790 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HYG85_18790 PF00005 ABC transporter HYG85_18795 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HYG85_18795 PF00005 ABC transporter HYG85_18805 PF00005 ABC transporter HYG85_18805 PF00664 ABC transporter transmembrane region HYG85_18845 PF00202 Aminotransferase class-III HYG85_18860 PF00005 ABC transporter HYG85_18875 PF12683 Protein of unknown function (DUF3798) HYG85_18880 PF00005 ABC transporter HYG85_18895 PF04186 FxsA cytoplasmic membrane protein HYG85_18900 PF02311 AraC-like ligand binding domain HYG85_18900 PF12833 Helix-turn-helix domain HYG85_18910 PF02743 Cache domain HYG85_18910 PF00672 HAMP domain HYG85_18910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYG85_18910 PF06580 Histidine kinase HYG85_18915 PF12833 Helix-turn-helix domain HYG85_18915 PF00072 Response regulator receiver domain HYG85_18920 PF13407 Periplasmic binding protein domain HYG85_18930 PF00005 ABC transporter HYG85_18935 PF02653 Branched-chain amino acid transport system / permease component HYG85_18940 PF02653 Branched-chain amino acid transport system / permease component HYG85_18960 PF01208 Uroporphyrinogen decarboxylase (URO-D) HYG85_18965 PF06580 Histidine kinase HYG85_18965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYG85_18965 PF07694 5TMR of 5TMR-LYT HYG85_18970 PF13407 Periplasmic binding protein domain HYG85_18975 PF12833 Helix-turn-helix domain HYG85_18975 PF00072 Response regulator receiver domain HYG85_18980 PF13407 Periplasmic binding protein domain HYG85_18985 PF00005 ABC transporter HYG85_18990 PF02653 Branched-chain amino acid transport system / permease component HYG85_18995 PF01261 Xylose isomerase-like TIM barrel HYG85_19000 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HYG85_19000 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HYG85_19020 PF01965 DJ-1/PfpI family HYG85_19020 PF12833 Helix-turn-helix domain HYG85_19025 PF13673 Acetyltransferase (GNAT) domain HYG85_19030 PF02449 Beta-galactosidase HYG85_19030 PF08532 Beta-galactosidase trimerisation domain HYG85_19030 PF08533 Beta-galactosidase C-terminal domain HYG85_19045 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HYG85_19045 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HYG85_19060 PF00291 Pyridoxal-phosphate dependent enzyme HYG85_19065 PF16552 D-ornithine 4,5-aminomutase alpha-subunit HYG85_19070 PF02310 B12 binding domain HYG85_19070 PF16554 Dimerisation domain of d-ornithine 4,5-aminomutase HYG85_19070 PF09043 D-Lysine 5,6-aminomutase TIM-barrel domain of alpha subunit HYG85_19075 PF13941 MutL protein HYG85_19080 PF01168 Alanine racemase, N-terminal domain HYG85_19105 PF02779 Transketolase, pyrimidine binding domain HYG85_19105 PF02780 Transketolase, C-terminal domain HYG85_19110 PF00456 Transketolase, thiamine diphosphate binding domain HYG85_19115 PF00202 Aminotransferase class-III HYG85_19125 PF00690 Cation transporter/ATPase, N-terminus HYG85_19125 PF00689 Cation transporting ATPase, C-terminus HYG85_19130 PF00027 Cyclic nucleotide-binding domain HYG85_19130 PF00325 Bacterial regulatory proteins, crp family HYG85_19145 PF01699 Sodium/calcium exchanger protein HYG85_19150 PF02645 Uncharacterised protein, DegV family COG1307 HYG85_19185 PF08450 SMP-30/Gluconolactonase/LRE-like region HYG85_19195 PF00920 Dehydratase family HYG85_19200 PF03737 Aldolase/RraA HYG85_19205 PF12833 Helix-turn-helix domain HYG85_19210 PF00703 Glycosyl hydrolases family 2 HYG85_19210 PF02837 Glycosyl hydrolases family 2, sugar binding domain HYG85_19210 PF16355 Domain of unknown function (DUF4982) HYG85_19210 PF13287 Fn3 associated HYG85_19210 PF02836 Glycosyl hydrolases family 2, TIM barrel domain HYG85_19215 PF16347 Domain of unknown function (DUF4976) HYG85_19215 PF00884 Sulfatase HYG85_19225 PF01740 STAS domain HYG85_19225 PF00916 Sulfate permease family HYG85_19240 PF01751 Toprim domain HYG85_19240 PF01131 DNA topoisomerase HYG85_19245 PF02574 Homocysteine S-methyltransferase HYG85_19245 PF02607 B12 binding domain HYG85_19245 PF02310 B12 binding domain HYG85_19245 PF00809 Pterin binding enzyme HYG85_19245 PF02965 Vitamin B12 dependent methionine synthase, activation domain HYG85_19250 PF02574 Homocysteine S-methyltransferase HYG85_19250 PF02310 B12 binding domain HYG85_19250 PF02607 B12 binding domain HYG85_19250 PF00809 Pterin binding enzyme HYG85_19250 PF02965 Vitamin B12 dependent methionine synthase, activation domain HYG85_19255 PF00550 Phosphopantetheine attachment site HYG85_19260 PF02801 Beta-ketoacyl synthase, C-terminal domain HYG85_19260 PF00109 Beta-ketoacyl synthase, N-terminal domain HYG85_19265 PF07977 FabA-like domain HYG85_19280 PF13193 AMP-binding enzyme C-terminal domain HYG85_19280 PF00501 AMP-binding enzyme HYG85_19280 PF00668 Condensation domain HYG85_19280 PF00550 Phosphopantetheine attachment site HYG85_19315 PF00005 ABC transporter HYG85_19315 PF02687 FtsX-like permease family HYG85_19315 PF12704 MacB-like periplasmic core domain HYG85_19320 PF10369 Small subunit of acetolactate synthase HYG85_19320 PF01842 ACT domain HYG85_19325 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain HYG85_19325 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain HYG85_19330 PF00682 HMGL-like HYG85_19330 PF08502 LeuA allosteric (dimerisation) domain HYG85_19335 PF00330 Aconitase family (aconitate hydratase) HYG85_19340 PF00694 Aconitase C-terminal domain HYG85_19345 PF00180 Isocitrate/isopropylmalate dehydrogenase HYG85_19350 PF00920 Dehydratase family HYG85_19355 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HYG85_19355 PF00205 Thiamine pyrophosphate enzyme, central domain HYG85_19355 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HYG85_19360 PF13673 Acetyltransferase (GNAT) domain HYG85_19360 PF04229 GrpB protein HYG85_19365 PF00266 Aminotransferase class-V HYG85_19370 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HYG85_19370 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HYG85_19370 PF01842 ACT domain HYG85_19380 PF01145 SPFH domain / Band 7 family HYG85_19385 PF01145 SPFH domain / Band 7 family HYG85_19390 PF00128 Alpha amylase, catalytic domain HYG85_19390 PF02806 Alpha amylase, C-terminal all-beta domain HYG85_19390 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) HYG85_19430 PF14698 Argininosuccinate lyase C-terminal HYG85_19430 PF00206 Lyase HYG85_19435 PF00764 Arginosuccinate synthase HYG85_19440 PF13396 Phospholipase_D-nuclease N-terminal HYG85_19440 PF13091 PLD-like domain HYG85_19445 PF01118 Semialdehyde dehydrogenase, NAD binding domain HYG85_19445 PF02774 Semialdehyde dehydrogenase, dimerisation domain HYG85_19450 PF01960 ArgJ family HYG85_19455 PF00696 Amino acid kinase family HYG85_19460 PF00202 Aminotransferase class-III HYG85_19465 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain HYG85_19465 PF00117 Glutamine amidotransferase class-I HYG85_19470 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HYG85_19470 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain HYG85_19470 PF02142 MGS-like domain HYG85_19475 PF00933 Glycosyl hydrolase family 3 N terminal domain HYG85_19475 PF01915 Glycosyl hydrolase family 3 C-terminal domain HYG85_19480 PF00175 Oxidoreductase NAD-binding domain HYG85_19480 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B HYG85_19485 PF13247 4Fe-4S dicluster domain HYG85_19485 PF07992 Pyridine nucleotide-disulphide oxidoreductase HYG85_19485 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster HYG85_19505 PF02540 NAD synthase HYG85_19505 PF00795 Carbon-nitrogen hydrolase HYG85_19510 PF02142 MGS-like domain HYG85_19515 PF10531 SLBB domain HYG85_19520 PF00486 Transcriptional regulatory protein, C terminal HYG85_19520 PF00072 Response regulator receiver domain HYG85_19525 PF00989 PAS fold HYG85_19525 PF00512 His Kinase A (phospho-acceptor) domain HYG85_19525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYG85_19525 PF16736 Single Cache-like HYG85_19535 PF00753 Metallo-beta-lactamase superfamily HYG85_19535 PF03772 Competence protein HYG85_19535 PF13567 Domain of unknown function (DUF4131) HYG85_19545 PF01649 Ribosomal protein S20 HYG85_19550 PF03418 Germination protease HYG85_19560 PF06421 GTP-binding protein LepA C-terminus HYG85_19560 PF00009 Elongation factor Tu GTP binding domain HYG85_19560 PF00679 Elongation factor G C-terminus HYG85_19560 PF03144 Elongation factor Tu domain 2 HYG85_19565 PF04055 Radical SAM superfamily HYG85_19565 PF06969 HemN C-terminal domain HYG85_19570 PF01628 HrcA protein C terminal domain HYG85_19575 PF01025 GrpE HYG85_19580 PF00012 Hsp70 protein HYG85_19585 PF00226 DnaJ domain HYG85_19585 PF01556 DnaJ C terminal domain HYG85_19585 PF00684 DnaJ central domain HYG85_19595 PF04452 RNA methyltransferase HYG85_19600 PF00072 Response regulator receiver domain HYG85_19605 PF00266 Aminotransferase class-V HYG85_19610 PF02568 Thiamine biosynthesis protein (ThiI) HYG85_19610 PF02926 THUMP domain HYG85_19620 PF00919 Uncharacterized protein family UPF0004 HYG85_19620 PF04055 Radical SAM superfamily HYG85_19620 PF01938 TRAM domain HYG85_19625 PF06135 IreB regulatory phosphoprotein HYG85_19630 PF03652 Holliday junction resolvase HYG85_19640 PF01475 Ferric uptake regulator family HYG85_19645 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain HYG85_19645 PF17770 Ribonuclease J C-terminal domain HYG85_19645 PF00753 Metallo-beta-lactamase superfamily HYG85_19655 PF02618 YceG-like family HYG85_19660 PF01596 O-methyltransferase HYG85_19665 PF01136 Peptidase family U32 HYG85_19665 PF16325 Peptidase family U32 C-terminal domain HYG85_19670 PF04542 Sigma-70 region 2 HYG85_19670 PF04545 Sigma-70, region 4 HYG85_19700 PF01209 ubiE/COQ5 methyltransferase family HYG85_19705 PF02903 Alpha amylase, N-terminal ig-like domain HYG85_19705 PF00128 Alpha amylase, catalytic domain HYG85_19705 PF00395 S-layer homology domain HYG85_19745 PF05496 Holliday junction DNA helicase RuvB P-loop domain HYG85_19745 PF17864 RuvB AAA lid domain HYG85_19745 PF05491 RuvB C-terminal winged helix domain HYG85_19760 PF00857 Isochorismatase family HYG85_19775 PF01488 Shikimate / quinate 5-dehydrogenase HYG85_19775 PF18317 Shikimate 5'-dehydrogenase C-terminal domain HYG85_19775 PF08501 Shikimate dehydrogenase substrate binding domain HYG85_19780 PF01202 Shikimate kinase HYG85_19785 PF01220 Dehydroquinase class II HYG85_19790 PF00557 Metallopeptidase family M24 HYG85_19790 PF01321 Creatinase/Prolidase N-terminal domain HYG85_19795 PF01132 Elongation factor P (EF-P) OB domain HYG85_19795 PF08207 Elongation factor P (EF-P) KOW-like domain HYG85_19795 PF09285 Elongation factor P, C-terminal HYG85_19800 PF01966 HD domain HYG85_19825 PF06686 Stage III sporulation protein AC/AD protein family HYG85_19850 PF03780 Asp23 family, cell envelope-related function HYG85_19855 PF01029 NusB family HYG85_19860 PF02601 Exonuclease VII, large subunit HYG85_19860 PF13742 OB-fold nucleic acid binding domain HYG85_19865 PF02609 Exonuclease VII small subunit HYG85_19870 PF00348 Polyprenyl synthetase HYG85_19885 PF02779 Transketolase, pyrimidine binding domain HYG85_19885 PF13292 1-deoxy-D-xylulose-5-phosphate synthase HYG85_19885 PF02780 Transketolase, C-terminal domain HYG85_19890 PF01728 FtsJ-like methyltransferase HYG85_19890 PF01479 S4 domain HYG85_19895 PF01513 ATP-NAD kinase HYG85_19900 PF01316 Arginine repressor, DNA binding domain HYG85_19900 PF02863 Arginine repressor, C-terminal domain HYG85_19905 PF13476 AAA domain HYG85_19910 PF05580 SpoIVB peptidase S55 HYG85_19910 PF17820 PDZ domain HYG85_19915 PF08769 Sporulation initiation factor Spo0A C terminal HYG85_19915 PF00072 Response regulator receiver domain HYG85_19925 PF17932 Tetracyclin repressor-like, C-terminal domain HYG85_19925 PF00440 Bacterial regulatory proteins, tetR family HYG85_19930 PF06463 Molybdenum Cofactor Synthesis C HYG85_19930 PF04055 Radical SAM superfamily HYG85_19940 PF05230 MASE2 domain HYG85_19940 PF00990 Diguanylate cyclase, GGDEF domain HYG85_19955 PF00300 Histidine phosphatase superfamily (branch 1) HYG85_19960 PF01425 Amidase HYG85_19975 PF00293 NUDIX domain HYG85_20010 PF00672 HAMP domain HYG85_20010 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HYG85_20015 PF00128 Alpha amylase, catalytic domain HYG85_20025 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_20030 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_20035 PF00128 Alpha amylase, catalytic domain HYG85_20035 PF16657 Maltogenic Amylase, C-terminal domain HYG85_20040 PF00356 Bacterial regulatory proteins, lacI family HYG85_20050 PF00465 Iron-containing alcohol dehydrogenase HYG85_20055 PF09092 Lyase, N terminal HYG85_20055 PF09093 Lyase, catalytic HYG85_20055 PF02278 Polysaccharide lyase family 8, super-sandwich domain HYG85_20060 PF04204 Homoserine O-succinyltransferase HYG85_20065 PF01797 Transposase IS200 like HYG85_20070 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HYG85_20070 PF01411 tRNA synthetases class II (A) HYG85_20085 PF13614 AAA domain HYG85_20090 PF02195 ParB-like nuclease domain HYG85_20090 PF17762 HTH domain found in ParB protein HYG85_20105 PF04002 RadC-like JAB domain HYG85_20140 PF03432 Relaxase/Mobilisation nuclease domain HYG85_20220 PF00437 Type II/IV secretion system protein HYG85_20240 PF01797 Transposase IS200 like HYG85_20370 PF12161 HsdM N-terminal domain HYG85_20370 PF02384 N-6 DNA Methylase HYG85_20380 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) HYG85_20380 PF18766 SWI2/SNF2 ATPase HYG85_20380 PF12008 Type I restriction and modification enzyme - subunit R C terminal HYG85_20390 PF01381 Helix-turn-helix HYG85_20405 PF13307 Helicase C-terminal domain HYG85_20405 PF06733 DEAD_2 HYG85_20445 PF00589 Phage integrase family HYG85_20445 PF14659 Phage integrase, N-terminal SAM-like domain HYG85_20450 PF01411 tRNA synthetases class II (A) HYG85_20450 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HYG85_20465 PF12833 Helix-turn-helix domain HYG85_20475 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HYG85_20475 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HYG85_20480 PF14667 Polysaccharide biosynthesis C-terminal domain HYG85_20480 PF01943 Polysaccharide biosynthesis protein HYG85_20485 PF01252 Signal peptidase (SPase) II HYG85_20505 PF13443 Cro/C1-type HTH DNA-binding domain HYG85_20540 PF00005 ABC transporter HYG85_20545 PF00392 Bacterial regulatory proteins, gntR family HYG85_20550 PF00950 ABC 3 transport family HYG85_20555 PF00005 ABC transporter HYG85_20560 PF01297 Zinc-uptake complex component A periplasmic HYG85_20565 PF01475 Ferric uptake regulator family HYG85_20570 PF01264 Chorismate synthase HYG85_20575 PF00563 EAL domain HYG85_20575 PF00990 Diguanylate cyclase, GGDEF domain HYG85_20575 PF03707 Bacterial signalling protein N terminal repeat HYG85_20580 PF01702 Queuine tRNA-ribosyltransferase HYG85_20585 PF02699 Preprotein translocase subunit HYG85_20605 PF04055 Radical SAM superfamily HYG85_20610 PF07549 SecD/SecF GG Motif HYG85_20610 PF02355 Protein export membrane protein HYG85_20615 PF10141 Single-strand DNA-specific exonuclease, C terminal domain HYG85_20615 PF17768 RecJ OB domain HYG85_20615 PF02272 DHHA1 domain HYG85_20615 PF01368 DHH family HYG85_20625 PF00156 Phosphoribosyl transferase domain HYG85_20630 PF02824 TGS domain HYG85_20630 PF04607 Region found in RelA / SpoT proteins HYG85_20630 PF13291 ACT domain HYG85_20635 PF02580 D-Tyr-tRNA(Tyr) deacylase HYG85_20640 PF00753 Metallo-beta-lactamase superfamily HYG85_20645 PF04055 Radical SAM superfamily HYG85_20655 PF00425 chorismate binding enzyme HYG85_20655 PF04715 Anthranilate synthase component I, N terminal region HYG85_20660 PF02885 Glycosyl transferase family, helical bundle domain HYG85_20660 PF00117 Glutamine amidotransferase class-I HYG85_20660 PF00591 Glycosyl transferase family, a/b domain HYG85_20665 PF02885 Glycosyl transferase family, helical bundle domain HYG85_20665 PF00591 Glycosyl transferase family, a/b domain HYG85_20670 PF00218 Indole-3-glycerol phosphate synthase HYG85_20675 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase HYG85_20680 PF00291 Pyridoxal-phosphate dependent enzyme HYG85_20685 PF00290 Tryptophan synthase alpha chain HYG85_20690 PF13393 Histidyl-tRNA synthetase HYG85_20690 PF03129 Anticodon binding domain HYG85_20695 PF00152 tRNA synthetases class II (D, K and N) HYG85_20695 PF02938 GAD domain HYG85_20695 PF01336 OB-fold nucleic acid binding domain HYG85_20700 PF12833 Helix-turn-helix domain HYG85_20715 PF02311 AraC-like ligand binding domain HYG85_20715 PF12833 Helix-turn-helix domain HYG85_20720 PF03547 Membrane transport protein HYG85_20735 PF12833 Helix-turn-helix domain HYG85_20735 PF00072 Response regulator receiver domain HYG85_20740 PF00672 HAMP domain HYG85_20740 PF02743 Cache domain HYG85_20740 PF06580 Histidine kinase HYG85_20740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYG85_20745 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_20750 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_20755 PF12010 Domain of unknown function (DUF3502) HYG85_20760 PF04854 Protein of unknown function, DUF624 HYG85_20765 PF04041 beta-1,4-mannooligosaccharide phosphorylase HYG85_20785 PF05893 Acyl-CoA reductase (LuxC) HYG85_20790 PF12833 Helix-turn-helix domain HYG85_20820 PF00266 Aminotransferase class-V HYG85_20825 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HYG85_20825 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HYG85_20840 PF00108 Thiolase, N-terminal domain HYG85_20840 PF02803 Thiolase, C-terminal domain HYG85_20860 PF00465 Iron-containing alcohol dehydrogenase HYG85_20875 PF02096 60Kd inner membrane protein HYG85_20880 PF13419 Haloacid dehalogenase-like hydrolase HYG85_20895 PF00395 S-layer homology domain HYG85_20895 PF00963 Cohesin domain HYG85_20915 PF00209 Sodium:neurotransmitter symporter family HYG85_20920 PF00464 Serine hydroxymethyltransferase HYG85_20940 PF02735 Ku70/Ku80 beta-barrel domain HYG85_20945 PF04679 ATP dependent DNA ligase C terminal region HYG85_20945 PF01068 ATP dependent DNA ligase domain HYG85_20945 PF04675 DNA ligase N terminus HYG85_20950 PF01068 ATP dependent DNA ligase domain HYG85_20955 PF08495 FIST N domain HYG85_20955 PF00563 EAL domain HYG85_20955 PF10442 FIST C domain HYG85_20955 PF00990 Diguanylate cyclase, GGDEF domain HYG85_20960 PF00749 tRNA synthetases class I (E and Q), catalytic domain HYG85_20965 PF08502 LeuA allosteric (dimerisation) domain HYG85_20965 PF00682 HMGL-like HYG85_20970 PF03060 Nitronate monooxygenase HYG85_20975 PF01797 Transposase IS200 like HYG85_20980 PF02743 Cache domain HYG85_20980 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HYG85_20980 PF00672 HAMP domain HYG85_21000 PF00884 Sulfatase HYG85_21000 PF16347 Domain of unknown function (DUF4976) HYG85_21010 PF00072 Response regulator receiver domain HYG85_21010 PF00196 Bacterial regulatory proteins, luxR family HYG85_21015 PF00106 short chain dehydrogenase HYG85_21020 PF13419 Haloacid dehalogenase-like hydrolase HYG85_21040 PF16326 ABC transporter C-terminal domain HYG85_21040 PF12848 ABC transporter HYG85_21040 PF00005 ABC transporter HYG85_21055 PF02687 FtsX-like permease family HYG85_21055 PF12704 MacB-like periplasmic core domain HYG85_21060 PF00005 ABC transporter HYG85_21070 PF00266 Aminotransferase class-V HYG85_21075 PF04239 Protein of unknown function (DUF421) HYG85_21090 PF03323 Bacillus/Clostridium GerA spore germination protein HYG85_21105 PF01571 Aminomethyltransferase folate-binding domain HYG85_21105 PF08669 Glycine cleavage T-protein C-terminal barrel domain HYG85_21110 PF01597 Glycine cleavage H-protein HYG85_21115 PF02347 Glycine cleavage system P-protein HYG85_21120 PF02347 Glycine cleavage system P-protein HYG85_21125 PF07992 Pyridine nucleotide-disulphide oxidoreductase HYG85_21125 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HYG85_21130 PF01037 Lrp/AsnC ligand binding domain HYG85_21135 PF01262 Alanine dehydrogenase/PNT, C-terminal domain HYG85_21135 PF05222 Alanine dehydrogenase/PNT, N-terminal domain HYG85_21140 PF13302 Acetyltransferase (GNAT) domain HYG85_21150 PF01261 Xylose isomerase-like TIM barrel HYG85_21155 PF00480 ROK family HYG85_21160 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HYG85_21160 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HYG85_21180 PF00535 Glycosyl transferase family 2 HYG85_21190 PF01713 Smr domain HYG85_21190 PF00488 MutS domain V HYG85_21195 PF04237 YjbR HYG85_21210 PF00924 Mechanosensitive ion channel HYG85_21215 PF03167 Uracil DNA glycosylase superfamily HYG85_21220 PF01751 Toprim domain HYG85_21220 PF01131 DNA topoisomerase HYG85_21240 PF00575 S1 RNA binding domain HYG85_21300 PF01906 Putative heavy-metal-binding HYG85_21315 PF00072 Response regulator receiver domain HYG85_21315 PF00486 Transcriptional regulatory protein, C terminal HYG85_21320 PF00512 His Kinase A (phospho-acceptor) domain HYG85_21320 PF00672 HAMP domain HYG85_21320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYG85_21325 PF00668 Condensation domain HYG85_21325 PF07993 Male sterility protein HYG85_21325 PF13193 AMP-binding enzyme C-terminal domain HYG85_21325 PF00501 AMP-binding enzyme HYG85_21325 PF00550 Phosphopantetheine attachment site HYG85_21330 PF02261 Aspartate decarboxylase HYG85_21335 PF02569 Pantoate-beta-alanine ligase HYG85_21340 PF02548 Ketopantoate hydroxymethyltransferase HYG85_21350 PF04127 DNA / pantothenate metabolism flavoprotein HYG85_21350 PF02441 Flavoprotein HYG85_21355 PF12833 Helix-turn-helix domain HYG85_21360 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_21365 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_21370 PF12010 Domain of unknown function (DUF3502) HYG85_21375 PF02836 Glycosyl hydrolases family 2, TIM barrel domain HYG85_21375 PF02837 Glycosyl hydrolases family 2, sugar binding domain HYG85_21375 PF00703 Glycosyl hydrolases family 2 HYG85_21375 PF16355 Domain of unknown function (DUF4982) HYG85_21385 PF00563 EAL domain HYG85_21385 PF00990 Diguanylate cyclase, GGDEF domain HYG85_21385 PF03707 Bacterial signalling protein N terminal repeat HYG85_21390 PF01497 Periplasmic binding protein HYG85_21390 PF12833 Helix-turn-helix domain HYG85_21395 PF00672 HAMP domain HYG85_21395 PF06580 Histidine kinase HYG85_21395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYG85_21395 PF02743 Cache domain HYG85_21400 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_21405 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_21410 PF12010 Domain of unknown function (DUF3502) HYG85_21425 PF04055 Radical SAM superfamily HYG85_21430 PF01228 Glycine radical HYG85_21430 PF02901 Pyruvate formate lyase-like HYG85_21435 PF01055 Glycosyl hydrolases family 31 HYG85_21435 PF17137 Domain of unknown function (DUF5110) HYG85_21435 PF16338 Domain of unknown function (DUF4968) HYG85_21440 PF12833 Helix-turn-helix domain HYG85_21440 PF02311 AraC-like ligand binding domain HYG85_21445 PF13411 MerR HTH family regulatory protein HYG85_21445 PF06445 GyrI-like small molecule binding domain HYG85_21450 PF01554 MatE HYG85_21460 PF12833 Helix-turn-helix domain HYG85_21460 PF02311 AraC-like ligand binding domain HYG85_21485 PF01381 Helix-turn-helix HYG85_21535 PF11495 Archaeal transcriptional regulator TrmB HYG85_21535 PF01978 Sugar-specific transcriptional regulator TrmB HYG85_21545 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal HYG85_21545 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit HYG85_21550 PF01522 Polysaccharide deacetylase HYG85_21555 PF00374 Nickel-dependent hydrogenase HYG85_21570 PF00708 Acylphosphatase HYG85_21570 PF17788 HypF Kae1-like domain HYG85_21570 PF01300 Telomere recombination HYG85_21570 PF07503 HypF finger HYG85_21575 PF01455 HupF/HypC family HYG85_21580 PF01924 Hydrogenase formation hypA family HYG85_21585 PF02769 AIR synthase related protein, C-terminal domain HYG85_21585 PF00586 AIR synthase related protein, N-terminal domain HYG85_21595 PF00884 Sulfatase HYG85_21600 PF07729 FCD domain HYG85_21600 PF00392 Bacterial regulatory proteins, gntR family HYG85_21605 PF00920 Dehydratase family HYG85_21630 PF02796 Helix-turn-helix domain of resolvase HYG85_21630 PF00239 Resolvase, N terminal domain HYG85_21635 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family HYG85_21640 PF06580 Histidine kinase HYG85_21640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYG85_21645 PF00072 Response regulator receiver domain HYG85_21650 PF12833 Helix-turn-helix domain HYG85_21660 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_21665 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_21685 PF11867 Domain of unknown function (DUF3387) HYG85_21685 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) HYG85_21685 PF18766 SWI2/SNF2 ATPase HYG85_21700 PF17863 AAA lid domain HYG85_21700 PF07726 ATPase family associated with various cellular activities (AAA) HYG85_21705 PF01882 Protein of unknown function DUF58 HYG85_21715 PF07584 Aerotolerance regulator N-terminal HYG85_21715 PF13519 von Willebrand factor type A domain HYG85_21745 PF00072 Response regulator receiver domain HYG85_21745 PF00486 Transcriptional regulatory protein, C terminal HYG85_21750 PF00512 His Kinase A (phospho-acceptor) domain HYG85_21750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYG85_21750 PF18719 ArlS sensor domain HYG85_21765 PF06071 Protein of unknown function (DUF933) HYG85_21765 PF01926 50S ribosome-binding GTPase HYG85_21775 PF01790 Prolipoprotein diacylglyceryl transferase HYG85_21785 PF02381 MraZ protein, putative antitoxin-like HYG85_21790 PF01795 MraW methylase family HYG85_21800 PF03717 Penicillin-binding Protein dimerisation domain HYG85_21800 PF03793 PASTA domain HYG85_21800 PF00905 Penicillin binding protein transpeptidase domain HYG85_21805 PF03793 PASTA domain HYG85_21805 PF03717 Penicillin-binding Protein dimerisation domain HYG85_21805 PF00905 Penicillin binding protein transpeptidase domain HYG85_21810 PF01225 Mur ligase family, catalytic domain HYG85_21810 PF02875 Mur ligase family, glutamate ligase domain HYG85_21810 PF08245 Mur ligase middle domain HYG85_21815 PF01225 Mur ligase family, catalytic domain HYG85_21815 PF02875 Mur ligase family, glutamate ligase domain HYG85_21815 PF08245 Mur ligase middle domain HYG85_21820 PF00953 Glycosyl transferase family 4 HYG85_21820 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 HYG85_21825 PF02875 Mur ligase family, glutamate ligase domain HYG85_21825 PF08245 Mur ligase middle domain HYG85_21830 PF01098 Cell cycle protein HYG85_21835 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HYG85_21845 PF00091 Tubulin/FtsZ family, GTPase domain HYG85_21845 PF12327 FtsZ family, C-terminal domain HYG85_21850 PF03419 Sporulation factor SpoIIGA HYG85_21855 PF04542 Sigma-70 region 2 HYG85_21855 PF04545 Sigma-70, region 4 HYG85_21860 PF04539 Sigma-70 region 3 HYG85_21860 PF04545 Sigma-70, region 4 HYG85_21860 PF04542 Sigma-70 region 2 HYG85_21870 PF03477 ATP cone domain HYG85_21880 PF01078 Magnesium chelatase, subunit ChlI HYG85_21880 PF13335 Magnesium chelatase, subunit ChlI C-terminal HYG85_21885 PF00842 Alanine racemase, C-terminal domain HYG85_21885 PF01168 Alanine racemase, N-terminal domain HYG85_21890 PF02388 FemAB family HYG85_21895 PF02481 DNA recombination-mediator protein A HYG85_21895 PF18255 DNA processing protein A sterile alpha motif domain HYG85_21900 PF01396 Topoisomerase DNA binding C4 zinc finger HYG85_21900 PF01131 DNA topoisomerase HYG85_21900 PF01751 Toprim domain HYG85_21905 PF08222 CodY helix-turn-helix domain HYG85_21905 PF06018 CodY GAF-like domain HYG85_21910 PF00460 Flagella basal body rod protein HYG85_21915 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HYG85_21915 PF00460 Flagella basal body rod protein HYG85_21920 PF02049 Flagellar hook-basal body complex protein FliE HYG85_21925 PF01514 Secretory protein of YscJ/FliF family HYG85_21925 PF08345 Flagellar M-ring protein C-terminal HYG85_21930 PF01706 FliG C-terminal domain HYG85_21930 PF14841 FliG middle domain HYG85_21930 PF14842 FliG N-terminal domain HYG85_21940 PF18269 T3SS EscN ATPase C-terminal domain HYG85_21940 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HYG85_21940 PF02874 ATP synthase alpha/beta family, beta-barrel domain HYG85_21955 PF02120 Flagellar hook-length control protein FliK HYG85_21960 PF03963 Flagellar hook capping protein - N-terminal region HYG85_21970 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HYG85_21970 PF00460 Flagella basal body rod protein HYG85_21970 PF07559 Flagellar basal body protein FlaE HYG85_21980 PF01618 MotA/TolQ/ExbB proton channel family HYG85_21985 PF00691 OmpA family HYG85_21985 PF13677 Membrane MotB of proton-channel complex MotA/MotB HYG85_21995 PF02154 Flagellar motor switch protein FliM HYG85_21995 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term HYG85_22000 PF04509 CheC-like family HYG85_22000 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term HYG85_22005 PF00072 Response regulator receiver domain HYG85_22015 PF00813 FliP family HYG85_22020 PF01313 Bacterial export proteins, family 3 HYG85_22025 PF01311 Bacterial export proteins, family 1 HYG85_22030 PF01312 FlhB HrpN YscU SpaS Family HYG85_22035 PF00771 FHIPEP family HYG85_22040 PF00448 SRP54-type protein, GTPase domain HYG85_22045 PF10609 NUBPL iron-transfer P-loop NTPase HYG85_22055 PF00072 Response regulator receiver domain HYG85_22055 PF01339 CheB methylesterase HYG85_22060 PF01584 CheW-like domain HYG85_22060 PF02895 Signal transducing histidine kinase, homodimeric domain HYG85_22060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYG85_22060 PF01627 Hpt domain HYG85_22060 PF07194 P2 response regulator binding domain HYG85_22065 PF01584 CheW-like domain HYG85_22070 PF04509 CheC-like family HYG85_22075 PF03975 CheD chemotactic sensory transduction HYG85_22085 PF04545 Sigma-70, region 4 HYG85_22085 PF04539 Sigma-70 region 3 HYG85_22085 PF04542 Sigma-70 region 2 HYG85_22110 PF00318 Ribosomal protein S2 HYG85_22115 PF00889 Elongation factor TS HYG85_22120 PF00696 Amino acid kinase family HYG85_22125 PF01765 Ribosome recycling factor HYG85_22130 PF01255 Putative undecaprenyl diphosphate synthase HYG85_22140 PF13288 DXP reductoisomerase C-terminal domain HYG85_22140 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase HYG85_22140 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain HYG85_22145 PF17820 PDZ domain HYG85_22145 PF02163 Peptidase family M50 HYG85_22150 PF04551 GcpE protein HYG85_22155 PF00929 Exonuclease HYG85_22155 PF02811 PHP domain HYG85_22155 PF14579 Helix-hairpin-helix motif HYG85_22155 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HYG85_22155 PF07733 Bacterial DNA polymerase III alpha NTPase domain HYG85_22155 PF11490 DNA polymerase III polC-type N-terminus II HYG85_22160 PF00209 Sodium:neurotransmitter symporter family HYG85_22170 PF00075 RNase H HYG85_22175 PF08460 Bacterial SH3 domain HYG85_22175 PF01551 Peptidase family M23 HYG85_22180 PF04607 Region found in RelA / SpoT proteins HYG85_22190 PF01189 16S rRNA methyltransferase RsmB/F HYG85_22190 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF HYG85_22190 PF17126 RsmF rRNA methyltransferase first C-terminal domain HYG85_22195 PF13419 Haloacid dehalogenase-like hydrolase HYG85_22200 PF00486 Transcriptional regulatory protein, C terminal HYG85_22200 PF00072 Response regulator receiver domain HYG85_22205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYG85_22205 PF00512 His Kinase A (phospho-acceptor) domain HYG85_22210 PF11842 Domain of unknown function (DUF3362) HYG85_22210 PF04055 Radical SAM superfamily HYG85_22210 PF08497 Radical SAM N-terminal HYG85_22220 PF00565 Staphylococcal nuclease homologue HYG85_22225 PF03006 Haemolysin-III related HYG85_22230 PF05524 PEP-utilising enzyme, N-terminal HYG85_22230 PF02896 PEP-utilising enzyme, TIM barrel domain HYG85_22230 PF00391 PEP-utilising enzyme, mobile domain HYG85_22235 PF00381 PTS HPr component phosphorylation site HYG85_22240 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HYG85_22245 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HYG85_22250 PF03611 PTS system sugar-specific permease component HYG85_22255 PF01261 Xylose isomerase-like TIM barrel HYG85_22260 PF02734 DAK2 domain HYG85_22265 PF02733 Dak1 domain HYG85_22270 PF01116 Fructose-bisphosphate aldolase class-II HYG85_22280 PF02449 Beta-galactosidase HYG85_22280 PF08533 Beta-galactosidase C-terminal domain HYG85_22280 PF08532 Beta-galactosidase trimerisation domain HYG85_22285 PF13344 Haloacid dehalogenase-like hydrolase HYG85_22290 PF04456 Protein of unknown function (DUF503) HYG85_22295 PF09334 tRNA synthetases class I (M) HYG85_22305 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_22310 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_22315 PF06580 Histidine kinase HYG85_22315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYG85_22315 PF00672 HAMP domain HYG85_22315 PF02743 Cache domain HYG85_22320 PF00072 Response regulator receiver domain HYG85_22320 PF12833 Helix-turn-helix domain HYG85_22325 PF02837 Glycosyl hydrolases family 2, sugar binding domain HYG85_22325 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 HYG85_22325 PF16355 Domain of unknown function (DUF4982) HYG85_22325 PF00703 Glycosyl hydrolases family 2 HYG85_22325 PF02836 Glycosyl hydrolases family 2, TIM barrel domain HYG85_22340 PF00072 Response regulator receiver domain HYG85_22340 PF12833 Helix-turn-helix domain HYG85_22355 PF08543 Phosphomethylpyrimidine kinase HYG85_22360 PF02110 Hydroxyethylthiazole kinase family HYG85_22365 PF01964 Radical SAM ThiC family HYG85_22375 PF13302 Acetyltransferase (GNAT) domain HYG85_22385 PF00849 RNA pseudouridylate synthase HYG85_22390 PF08331 Domain of unknown function (DUF1730) HYG85_22395 PF03838 Recombination protein U HYG85_22400 PF13393 Histidyl-tRNA synthetase HYG85_22405 PF01634 ATP phosphoribosyltransferase HYG85_22410 PF00815 Histidinol dehydrogenase HYG85_22415 PF00155 Aminotransferase class I and II HYG85_22420 PF00475 Imidazoleglycerol-phosphate dehydratase HYG85_22425 PF00117 Glutamine amidotransferase class-I HYG85_22430 PF00977 Histidine biosynthesis protein HYG85_22435 PF00977 Histidine biosynthesis protein HYG85_22440 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase HYG85_22440 PF01502 Phosphoribosyl-AMP cyclohydrolase HYG85_22450 PF01926 50S ribosome-binding GTPase HYG85_22450 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal HYG85_22460 PF13581 Histidine kinase-like ATPase domain HYG85_22465 PF04060 Putative Fe-S cluster HYG85_22475 PF00989 PAS fold HYG85_22475 PF00512 His Kinase A (phospho-acceptor) domain HYG85_22475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYG85_22480 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit HYG85_22480 PF13237 4Fe-4S dicluster domain HYG85_22480 PF13375 RnfC Barrel sandwich hybrid domain HYG85_22480 PF10531 SLBB domain HYG85_22485 PF03116 NQR2, RnfD, RnfE family HYG85_22490 PF04205 FMN-binding domain HYG85_22495 PF02508 Rnf-Nqr subunit, membrane protein HYG85_22500 PF02508 Rnf-Nqr subunit, membrane protein HYG85_22505 PF04060 Putative Fe-S cluster HYG85_22505 PF13187 4Fe-4S dicluster domain HYG85_22505 PF00037 4Fe-4S binding domain HYG85_22515 PF02545 Maf-like protein HYG85_22520 PF04002 RadC-like JAB domain HYG85_22530 PF04085 rod shape-determining protein MreC HYG85_22540 PF03717 Penicillin-binding Protein dimerisation domain HYG85_22540 PF00905 Penicillin binding protein transpeptidase domain HYG85_22545 PF03775 Septum formation inhibitor MinC, C-terminal domain HYG85_22550 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain HYG85_22555 PF03776 Septum formation topological specificity factor MinE HYG85_22560 PF01098 Cell cycle protein HYG85_22565 PF02142 MGS-like domain HYG85_22575 PF04070 Domain of unknown function (DUF378) HYG85_22580 PF01476 LysM domain HYG85_22580 PF00246 Zinc carboxypeptidase HYG85_22590 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HYG85_22600 PF01047 MarR family HYG85_22610 PF09278 MerR, DNA binding HYG85_22610 PF00376 MerR family regulatory protein HYG85_22615 PF04371 Porphyromonas-type peptidyl-arginine deiminase HYG85_22620 PF03190 Protein of unknown function, DUF255 HYG85_22630 PF06580 Histidine kinase HYG85_22630 PF02743 Cache domain HYG85_22630 PF00672 HAMP domain HYG85_22630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYG85_22635 PF12833 Helix-turn-helix domain HYG85_22640 PF13416 Bacterial extracellular solute-binding protein HYG85_22645 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_22650 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_22675 PF01168 Alanine racemase, N-terminal domain HYG85_22680 PF04472 Cell division protein SepF HYG85_22685 PF02325 YGGT family HYG85_22700 PF01761 3-dehydroquinate synthase HYG85_22705 PF01252 Signal peptidase (SPase) II HYG85_22710 PF00849 RNA pseudouridylate synthase HYG85_22710 PF01479 S4 domain HYG85_22720 PF02899 Phage integrase, N-terminal SAM-like domain HYG85_22720 PF00589 Phage integrase family HYG85_22740 PF18419 ATP-grasp-like domain HYG85_22740 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain HYG85_22740 PF04262 Glutamate-cysteine ligase HYG85_22745 PF10990 Protein of unknown function (DUF2809) HYG85_22750 PF08141 Small acid-soluble spore protein H family HYG85_22755 PF00204 DNA gyrase B HYG85_22755 PF00986 DNA gyrase B subunit, carboxyl terminus HYG85_22755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYG85_22755 PF01751 Toprim domain HYG85_22760 PF03989 DNA gyrase C-terminal domain, beta-propeller HYG85_22760 PF00521 DNA gyrase/topoisomerase IV, subunit A HYG85_22785 PF00155 Aminotransferase class I and II HYG85_22795 PF00156 Phosphoribosyl transferase domain HYG85_22800 PF00860 Permease family HYG85_22805 PF00704 Glycosyl hydrolases family 18 HYG85_22810 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HYG85_22810 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HYG85_22815 PF01979 Amidohydrolase family HYG85_22835 PF12833 Helix-turn-helix domain HYG85_22850 PF01497 Periplasmic binding protein HYG85_22855 PF01032 FecCD transport family HYG85_22860 PF00005 ABC transporter HYG85_22865 PF00561 alpha/beta hydrolase fold HYG85_22870 PF16925 Tetracyclin repressor-like, C-terminal domain HYG85_22870 PF00440 Bacterial regulatory proteins, tetR family HYG85_22875 PF01554 MatE HYG85_22885 PF13407 Periplasmic binding protein domain HYG85_22890 PF00005 ABC transporter HYG85_22895 PF02653 Branched-chain amino acid transport system / permease component HYG85_22900 PF02653 Branched-chain amino acid transport system / permease component HYG85_22905 PF01380 SIS domain HYG85_22910 PF03323 Bacillus/Clostridium GerA spore germination protein HYG85_22920 PF03845 Spore germination protein HYG85_22940 PF00672 HAMP domain HYG85_22940 PF02743 Cache domain HYG85_22940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYG85_22940 PF06580 Histidine kinase HYG85_22945 PF00196 Bacterial regulatory proteins, luxR family HYG85_22945 PF00072 Response regulator receiver domain HYG85_22955 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_22960 PF00528 Binding-protein-dependent transport system inner membrane component HYG85_22980 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain HYG85_22980 PF04616 Glycosyl hydrolases family 43 HYG85_22990 PF01171 PP-loop family HYG85_22995 PF00589 Phage integrase family HYG85_22995 PF02899 Phage integrase, N-terminal SAM-like domain HYG85_23005 PF01726 LexA DNA binding domain HYG85_23005 PF00717 Peptidase S24-like HYG85_23010 PF01966 HD domain HYG85_23015 PF01467 Cytidylyltransferase-like HYG85_23030 PF09269 Domain of unknown function (DUF1967) HYG85_23030 PF01926 50S ribosome-binding GTPase HYG85_23030 PF01018 GTP1/OBG HYG85_23035 PF01016 Ribosomal L27 protein HYG85_23045 PF00829 Ribosomal prokaryotic L21 protein HYG85_23050 PF12706 Beta-lactamase superfamily domain HYG85_23055 PF10150 Ribonuclease E/G family HYG85_23055 PF00575 S1 RNA binding domain HYG85_23075 PF00733 Asparagine synthase HYG85_23075 PF13537 Glutamine amidotransferase domain HYG85_23080 PF01479 S4 domain HYG85_23080 PF00579 tRNA synthetases class I (W and Y) HYG85_23090 PF01925 Sulfite exporter TauE/SafE HYG85_23095 PF01546 Peptidase family M20/M25/M40 HYG85_23095 PF07687 Peptidase dimerisation domain HYG85_23100 PF05167 Uncharacterised ACR (DUF711) HYG85_23110 PF00753 Metallo-beta-lactamase superfamily HYG85_23115 PF00072 Response regulator receiver domain HYG85_23115 PF00990 Diguanylate cyclase, GGDEF domain HYG85_23120 PF02491 SHS2 domain inserted in FTSA HYG85_23130 PF01121 Dephospho-CoA kinase HYG85_23135 PF00476 DNA polymerase family A HYG85_23135 PF01367 5'-3' exonuclease, C-terminal SAM fold HYG85_23135 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain HYG85_23145 PF04542 Sigma-70 region 2 HYG85_23145 PF08281 Sigma-70, region 4 HYG85_23170 PF01979 Amidohydrolase family HYG85_23175 PF00291 Pyridoxal-phosphate dependent enzyme HYG85_23180 PF01979 Amidohydrolase family HYG85_23180 PF13382 Adenine deaminase C-terminal domain HYG85_23185 PF01979 Amidohydrolase family HYG85_23195 PF01799 [2Fe-2S] binding domain HYG85_23195 PF00111 2Fe-2S iron-sulfur cluster binding domain HYG85_23200 PF03450 CO dehydrogenase flavoprotein C-terminal domain HYG85_23200 PF00941 FAD binding domain in molybdopterin dehydrogenase HYG85_23205 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase HYG85_23205 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain HYG85_23210 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HYG85_23210 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HYG85_23215 PF01546 Peptidase family M20/M25/M40 HYG85_23215 PF07687 Peptidase dimerisation domain HYG85_23225 PF01979 Amidohydrolase family HYG85_23230 PF07992 Pyridine nucleotide-disulphide oxidoreductase HYG85_23230 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster HYG85_23235 PF00111 2Fe-2S iron-sulfur cluster binding domain HYG85_23235 PF01799 [2Fe-2S] binding domain HYG85_23240 PF13478 XdhC Rossmann domain HYG85_23240 PF02625 XdhC and CoxI family HYG85_23245 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase HYG85_23260 PF13478 XdhC Rossmann domain HYG85_23260 PF02625 XdhC and CoxI family HYG85_23265 PF02388 FemAB family HYG85_23270 PF01757 Acyltransferase family HYG85_23270 PF00842 Alanine racemase, C-terminal domain HYG85_23270 PF01168 Alanine racemase, N-terminal domain HYG85_23275 PF02557 D-alanyl-D-alanine carboxypeptidase HYG85_23280 PF07478 D-ala D-ala ligase C-terminus HYG85_23280 PF01820 D-ala D-ala ligase N-terminus HYG85_23285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYG85_23285 PF00512 His Kinase A (phospho-acceptor) domain HYG85_23290 PF00486 Transcriptional regulatory protein, C terminal HYG85_23290 PF00072 Response regulator receiver domain HYG85_23300 PF00905 Penicillin binding protein transpeptidase domain HYG85_23305 PF01098 Cell cycle protein HYG85_23310 PF01136 Peptidase family U32 HYG85_23310 PF16325 Peptidase family U32 C-terminal domain HYG85_23325 PF17864 RuvB AAA lid domain HYG85_23325 PF05491 RuvB C-terminal winged helix domain HYG85_23325 PF05496 Holliday junction DNA helicase RuvB P-loop domain HYG85_23330 PF07499 RuvA, C-terminal domain HYG85_23330 PF01330 RuvA N terminal domain HYG85_23335 PF01266 FAD dependent oxidoreductase HYG85_23335 PF00355 Rieske [2Fe-2S] domain HYG85_23345 PF13344 Haloacid dehalogenase-like hydrolase HYG85_23345 PF00293 NUDIX domain HYG85_23350 PF00293 NUDIX domain HYG85_23360 PF00171 Aldehyde dehydrogenase family HYG85_23365 PF01812 5-formyltetrahydrofolate cyclo-ligase family HYG85_23370 PF05979 Bacterial protein of unknown function (DUF896) HYG85_23380 PF00696 Amino acid kinase family HYG85_23385 PF02074 Carboxypeptidase Taq (M32) metallopeptidase HYG85_23415 PF16363 GDP-mannose 4,6 dehydratase HYG85_23435 PF16874 Glycosyl hydrolase family 36 C-terminal domain HYG85_23435 PF16875 Glycosyl hydrolase family 36 N-terminal domain HYG85_23445 PF03023 Lipid II flippase MurJ HYG85_23450 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HYG85_23455 PF17479 Protein of unknown function (DUF3048) C-terminal domain HYG85_23455 PF11258 Protein of unknown function (DUF3048) N-terminal domain HYG85_23460 PF01219 Prokaryotic diacylglycerol kinase HYG85_23465 PF02130 Uncharacterized protein family UPF0054 HYG85_23470 PF07698 7TM receptor with intracellular HD hydrolase HYG85_23470 PF07697 7TM-HD extracellular HYG85_23470 PF01966 HD domain HYG85_23475 PF02562 PhoH-like protein HYG85_23490 PF09424 Yqey-like protein HYG85_23495 PF01165 Ribosomal protein S21 HYG85_23500 PF09587 Bacterial capsule synthesis protein PGA_cap HYG85_23505 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HYG85_23505 PF01411 tRNA synthetases class II (A) HYG85_23505 PF02272 DHHA1 domain HYG85_23530 PF00583 Acetyltransferase (GNAT) family HYG85_23530 PF14268 YoaP-like HYG85_23545 PF08125 Mannitol dehydrogenase C-terminal domain HYG85_23545 PF01232 Mannitol dehydrogenase Rossmann domain HYG85_23550 PF08666 SAF domain HYG85_23550 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus HYG85_23555 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain HYG85_23555 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain HYG85_23560 PF00890 FAD binding domain HYG85_23565 PF02445 Quinolinate synthetase A protein HYG85_23575 PF00072 Response regulator receiver domain HYG85_23575 PF00196 Bacterial regulatory proteins, luxR family HYG85_23580 PF06580 Histidine kinase HYG85_23580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYG85_23580 PF00672 HAMP domain HYG85_23580 PF02743 Cache domain HYG85_23595 PF02653 Branched-chain amino acid transport system / permease component HYG85_23600 PF00005 ABC transporter HYG85_23615 PF00005 ABC transporter HYG85_23640 PF07726 ATPase family associated with various cellular activities (AAA) HYG85_23640 PF17863 AAA lid domain HYG85_23645 PF05036 Sporulation related domain HYG85_23645 PF01520 N-acetylmuramoyl-L-alanine amidase HYG85_23650 PF06838 Methionine gamma-lyase HYG85_23655 PF17209 Hfq protein HYG85_23665 PF08676 MutL C terminal dimerisation domain HYG85_23665 PF01119 DNA mismatch repair protein, C-terminal domain HYG85_23670 PF00488 MutS domain V HYG85_23670 PF05190 MutS family domain IV HYG85_23670 PF05192 MutS domain III HYG85_23670 PF05188 MutS domain II HYG85_23670 PF01624 MutS domain I HYG85_23675 PF00919 Uncharacterized protein family UPF0004 HYG85_23675 PF04055 Radical SAM superfamily HYG85_23675 PF01938 TRAM domain HYG85_23690 PF01739 CheR methyltransferase, SAM binding domain HYG85_23690 PF03705 CheR methyltransferase, all-alpha domain HYG85_23695 PF02401 LytB protein HYG85_23695 PF00575 S1 RNA binding domain HYG85_23700 PF02401 LytB protein HYG85_23705 PF02224 Cytidylate kinase HYG85_23710 PF07736 Chorismate mutase type I HYG85_23720 PF01418 Helix-turn-helix domain, rpiR family HYG85_23720 PF01380 SIS domain HYG85_23725 PF00364 Biotin-requiring enzyme HYG85_23725 PF00682 HMGL-like HYG85_23725 PF02436 Conserved carboxylase domain HYG85_23730 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit HYG85_23735 PF00364 Biotin-requiring enzyme HYG85_23745 PF01039 Carboxyl transferase domain HYG85_23750 PF06962 Putative rRNA methylase HYG85_23755 PF01479 S4 domain HYG85_23755 PF00849 RNA pseudouridylate synthase HYG85_23760 PF00768 D-alanyl-D-alanine carboxypeptidase HYG85_23760 PF07943 Penicillin-binding protein 5, C-terminal domain HYG85_23765 PF04079 Segregation and condensation complex subunit ScpB HYG85_23770 PF02616 Segregation and condensation protein ScpA HYG85_23790 PF00905 Penicillin binding protein transpeptidase domain HYG85_23790 PF05569 BlaR1 peptidase M56 HYG85_23795 PF03965 Penicillinase repressor HYG85_23800 PF00395 S-layer homology domain HYG85_23800 PF00963 Cohesin domain HYG85_23805 PF01515 Phosphate acetyl/butaryl transferase HYG85_23810 PF00871 Acetokinase family HYG85_23815 PF12833 Helix-turn-helix domain HYG85_23815 PF02311 AraC-like ligand binding domain HYG85_23820 PF07943 Penicillin-binding protein 5, C-terminal domain HYG85_23820 PF00768 D-alanyl-D-alanine carboxypeptidase HYG85_23825 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain HYG85_23825 PF00591 Glycosyl transferase family, a/b domain HYG85_23825 PF02885 Glycosyl transferase family, helical bundle domain HYG85_23830 PF01676 Metalloenzyme superfamily HYG85_23845 PF02915 Rubrerythrin HYG85_23855 PF10842 Protein of unknown function (DUF2642) HYG85_23905 PF00072 Response regulator receiver domain HYG85_23910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HYG85_23910 PF00672 HAMP domain HYG85_23910 PF02743 Cache domain HYG85_23910 PF06580 Histidine kinase HYG85_23920 PF00005 ABC transporter HYG85_23925 PF02653 Branched-chain amino acid transport system / permease component HYG85_23930 PF00704 Glycosyl hydrolases family 18 HYG85_23940 PF01255 Putative undecaprenyl diphosphate synthase HYG85_23955 PF00589 Phage integrase family HYG85_23955 PF02899 Phage integrase, N-terminal SAM-like domain HYG85_23965 PF00293 NUDIX domain HYG85_23970 PF03807 NADP oxidoreductase coenzyme F420-dependent HYG85_23970 PF14748 Pyrroline-5-carboxylate reductase dimerisation HYG85_23975 PF10397 Adenylosuccinate lyase C-terminus HYG85_23975 PF00206 Lyase HYG85_23980 PF00155 Aminotransferase class I and II HYG85_23985 PF04232 Stage V sporulation protein S (SpoVS) HYG85_23990 PF01966 HD domain HYG85_23990 PF00013 KH domain HYG85_23990 PF12072 Domain of unknown function (DUF3552) HYG85_23995 PF02631 RecX family HYG85_24000 PF00154 recA bacterial DNA recombination protein HYG85_24005 PF18146 Damage-inducible protein CinA KH domain HYG85_24005 PF00994 Probable molybdopterin binding domain HYG85_24005 PF02464 Competence-damaged protein HYG85_24010 PF01066 CDP-alcohol phosphatidyltransferase HYG85_24015 PF18693 TRAM domain HYG85_24015 PF00919 Uncharacterized protein family UPF0004 HYG85_24015 PF04055 Radical SAM superfamily HYG85_24020 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain HYG85_24020 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain HYG85_24025 PF01268 Formate--tetrahydrofolate ligase HYG85_24030 PF17854 FtsK alpha domain HYG85_24030 PF09397 Ftsk gamma domain HYG85_24030 PF01580 FtsK/SpoIIIE family HYG85_24035 PF02673 Bacitracin resistance protein BacA HYG85_24045 PF00574 Clp protease HYG85_24050 PF00696 Amino acid kinase family HYG85_24050 PF13840 ACT domain HYG85_24055 PF02441 Flavoprotein HYG85_24070 PF13378 Enolase C-terminal domain-like HYG85_24070 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain HYG85_24075 PF17676 LD-carboxypeptidase C-terminal domain HYG85_24075 PF02016 LD-carboxypeptidase N-terminal domain HYG85_24080 PF03702 Anhydro-N-acetylmuramic acid kinase HYG85_24090 PF01022 Bacterial regulatory protein, arsR family HYG85_24105 PF01494 FAD binding domain HYG85_24115 PF00005 ABC transporter HYG85_24125 PF00248 Aldo/keto reductase family HYG85_24130 PF00692 dUTPase HYG85_24135 PF05193 Peptidase M16 inactive domain HYG85_24135 PF00675 Insulinase (Peptidase family M16) HYG85_24140 PF00013 KH domain HYG85_24140 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain HYG85_24140 PF01138 3' exoribonuclease family, domain 1 HYG85_24140 PF03725 3' exoribonuclease family, domain 2 HYG85_24140 PF00575 S1 RNA binding domain HYG85_24145 PF00312 Ribosomal protein S15 HYG85_24150 PF06574 FAD synthetase HYG85_24150 PF01687 Riboflavin kinase HYG85_24155 PF16198 tRNA pseudouridylate synthase B C-terminal domain HYG85_24155 PF01509 TruB family pseudouridylate synthase (N terminal domain) HYG85_24165 PF02033 Ribosome-binding factor A HYG85_24170 PF00009 Elongation factor Tu GTP binding domain HYG85_24170 PF11987 Translation-initiation factor 2 HYG85_24170 PF04760 Translation initiation factor IF-2, N-terminal region HYG85_24180 PF04296 Protein of unknown function (DUF448) HYG85_24185 PF13184 NusA-like KH domain HYG85_24185 PF08529 NusA N-terminal domain HYG85_24185 PF00575 S1 RNA binding domain HYG85_24190 PF02576 RimP N-terminal domain HYG85_24190 PF17384 RimP C-terminal SH3 domain HYG85_24195 PF09547 Stage IV sporulation protein A (spore_IV_A)