locus-tag class description VAPA_1c00010 PF11638 DnaA N-terminal domain VAPA_1c00010 PF08299 Bacterial dnaA protein helix-turn-helix VAPA_1c00010 PF00308 Bacterial dnaA protein VAPA_1c00020 PF00712 DNA polymerase III beta subunit, N-terminal domain VAPA_1c00020 PF02768 DNA polymerase III beta subunit, C-terminal domain VAPA_1c00020 PF02767 DNA polymerase III beta subunit, central domain VAPA_1c00030 PF01751 Toprim domain VAPA_1c00030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAPA_1c00030 PF18053 DNA gyrase B subunit insert domain VAPA_1c00030 PF00986 DNA gyrase B subunit, carboxyl terminus VAPA_1c00030 PF00204 DNA gyrase B VAPA_1c00080 PF00149 Calcineurin-like phosphoesterase VAPA_1c00100 PF09411 Lipid A 3-O-deacylase (PagL) VAPA_1c00110 PF03706 Lysylphosphatidylglycerol synthase TM region VAPA_1c00120 PF13091 PLD-like domain VAPA_1c00130 PF03372 Endonuclease/Exonuclease/phosphatase family VAPA_1c00170 PF02678 Pirin VAPA_1c00170 PF05726 Pirin C-terminal cupin domain VAPA_1c00190 PF00912 Transglycosylase VAPA_1c00230 PF06123 Inner membrane protein CreD VAPA_1c00240 PF00905 Penicillin binding protein transpeptidase domain VAPA_1c00240 PF00912 Transglycosylase VAPA_1c00240 PF17092 Penicillin-binding protein OB-like domain VAPA_1c00260 PF00512 His Kinase A (phospho-acceptor) domain VAPA_1c00260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAPA_1c00260 PF00672 HAMP domain VAPA_1c00270 PF00072 Response regulator receiver domain VAPA_1c00270 PF00486 Transcriptional regulatory protein, C terminal VAPA_1c00290 PF09278 MerR, DNA binding VAPA_1c00290 PF00376 MerR family regulatory protein VAPA_1c00300 PF00403 Heavy-metal-associated domain VAPA_1c00310 PF00403 Heavy-metal-associated domain VAPA_1c00320 PF00583 Acetyltransferase (GNAT) family VAPA_1c00330 PF00109 Beta-ketoacyl synthase, N-terminal domain VAPA_1c00330 PF02801 Beta-ketoacyl synthase, C-terminal domain VAPA_1c00340 PF00550 Phosphopantetheine attachment site VAPA_1c00360 PF00486 Transcriptional regulatory protein, C terminal VAPA_1c00360 PF00072 Response regulator receiver domain VAPA_1c00370 PF00512 His Kinase A (phospho-acceptor) domain VAPA_1c00370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAPA_1c00380 PF00724 NADH:flavin oxidoreductase / NADH oxidase family VAPA_1c00400 PF00378 Enoyl-CoA hydratase/isomerase VAPA_1c00410 PF00043 Glutathione S-transferase, C-terminal domain VAPA_1c00410 PF02798 Glutathione S-transferase, N-terminal domain VAPA_1c00440 PF01134 Glucose inhibited division protein A VAPA_1c00440 PF13932 GidA associated domain VAPA_1c00450 PF02527 rRNA small subunit methyltransferase G VAPA_1c00470 PF13614 AAA domain VAPA_1c00490 PF02195 ParB-like nuclease domain VAPA_1c00490 PF17762 HTH domain found in ParB protein VAPA_1c00510 PF02913 FAD linked oxidases, C-terminal domain VAPA_1c00510 PF01565 FAD binding domain VAPA_1c00530 PF01923 Cobalamin adenosyltransferase VAPA_1c00600 PF03466 LysR substrate binding domain VAPA_1c00600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c00640 PF03776 Septum formation topological specificity factor MinE VAPA_1c00650 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain VAPA_1c00660 PF03775 Septum formation inhibitor MinC, C-terminal domain VAPA_1c00660 PF05209 Septum formation inhibitor MinC, N-terminal domain VAPA_1c00670 PF00860 Permease family VAPA_1c00680 PF03061 Thioesterase superfamily VAPA_1c00720 PF00368 Hydroxymethylglutaryl-coenzyme A reductase VAPA_1c00730 PF00392 Bacterial regulatory proteins, gntR family VAPA_1c00730 PF00155 Aminotransferase class I and II VAPA_1c00740 PF01979 Amidohydrolase family VAPA_1c00760 PF07690 Major Facilitator Superfamily VAPA_1c00770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c00770 PF03466 LysR substrate binding domain VAPA_1c00780 PF13193 AMP-binding enzyme C-terminal domain VAPA_1c00780 PF00501 AMP-binding enzyme VAPA_1c00790 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain VAPA_1c00790 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain VAPA_1c00800 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_1c00810 PF05853 beta-keto acid cleavage enzyme VAPA_1c00830 PF00743 Flavin-binding monooxygenase-like VAPA_1c00840 PF00158 Sigma-54 interaction domain VAPA_1c00840 PF01590 GAF domain VAPA_1c00840 PF02954 Bacterial regulatory protein, Fis family VAPA_1c00850 PF00005 ABC transporter VAPA_1c00860 PF12399 Branched-chain amino acid ATP-binding cassette transporter VAPA_1c00860 PF00005 ABC transporter VAPA_1c00880 PF02653 Branched-chain amino acid transport system / permease component VAPA_1c00910 PF00501 AMP-binding enzyme VAPA_1c00910 PF13193 AMP-binding enzyme C-terminal domain VAPA_1c00940 PF01202 Shikimate kinase VAPA_1c01040 PF07992 Pyridine nucleotide-disulphide oxidoreductase VAPA_1c01070 PF04199 Putative cyclase VAPA_1c01080 PF00528 Binding-protein-dependent transport system inner membrane component VAPA_1c01090 PF00528 Binding-protein-dependent transport system inner membrane component VAPA_1c01100 PF00005 ABC transporter VAPA_1c01130 PF13193 AMP-binding enzyme C-terminal domain VAPA_1c01130 PF00501 AMP-binding enzyme VAPA_1c01140 PF00672 HAMP domain VAPA_1c01140 PF00211 Adenylate and Guanylate cyclase catalytic domain VAPA_1c01140 PF02743 Cache domain VAPA_1c01150 PF09859 Oxygenase, catalysing oxidative methylation of damaged DNA VAPA_1c01160 PF01557 Fumarylacetoacetate (FAA) hydrolase family VAPA_1c01170 PF01425 Amidase VAPA_1c01190 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VAPA_1c01210 PF03480 Bacterial extracellular solute-binding protein, family 7 VAPA_1c01220 PF09339 IclR helix-turn-helix domain VAPA_1c01220 PF01614 Bacterial transcriptional regulator VAPA_1c01230 PF01979 Amidohydrolase family VAPA_1c01230 PF00449 Urease alpha-subunit, N-terminal domain VAPA_1c01250 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV VAPA_1c01260 PF03466 LysR substrate binding domain VAPA_1c01260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c01270 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VAPA_1c01270 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VAPA_1c01270 PF02770 Acyl-CoA dehydrogenase, middle domain VAPA_1c01280 PF02515 CoA-transferase family III VAPA_1c01320 PF03167 Uracil DNA glycosylase superfamily VAPA_1c01340 PF00449 Urease alpha-subunit, N-terminal domain VAPA_1c01340 PF01979 Amidohydrolase family VAPA_1c01350 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_1c01370 PF08240 Alcohol dehydrogenase GroES-like domain VAPA_1c01370 PF00107 Zinc-binding dehydrogenase VAPA_1c01380 PF05853 beta-keto acid cleavage enzyme VAPA_1c01400 PF00775 Dioxygenase VAPA_1c01400 PF04444 Catechol dioxygenase N terminus VAPA_1c01410 PF00356 Bacterial regulatory proteins, lacI family VAPA_1c01440 PF03466 LysR substrate binding domain VAPA_1c01440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c01470 PF00092 von Willebrand factor type A domain VAPA_1c01480 PF07728 AAA domain (dynein-related subfamily) VAPA_1c01480 PF08406 CbbQ/NirQ/NorQ C-terminal VAPA_1c01490 PF00561 alpha/beta hydrolase fold VAPA_1c01510 PF00795 Carbon-nitrogen hydrolase VAPA_1c01520 PF00005 ABC transporter VAPA_1c01540 PF02653 Branched-chain amino acid transport system / permease component VAPA_1c01550 PF02653 Branched-chain amino acid transport system / permease component VAPA_1c01560 PF13458 Periplasmic binding protein VAPA_1c01600 PF04960 Glutaminase VAPA_1c01630 PF01613 Flavin reductase like domain VAPA_1c01640 PF07670 Nucleoside recognition VAPA_1c01650 PF13091 PLD-like domain VAPA_1c01670 PF00005 ABC transporter VAPA_1c01680 PF00005 ABC transporter VAPA_1c01680 PF12399 Branched-chain amino acid ATP-binding cassette transporter VAPA_1c01710 PF13458 Periplasmic binding protein VAPA_1c01720 PF00111 2Fe-2S iron-sulfur cluster binding domain VAPA_1c01730 PF00120 Glutamine synthetase, catalytic domain VAPA_1c01740 PF00355 Rieske [2Fe-2S] domain VAPA_1c01780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c01780 PF03466 LysR substrate binding domain VAPA_1c01800 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain VAPA_1c01800 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain VAPA_1c01820 PF00291 Pyridoxal-phosphate dependent enzyme VAPA_1c01820 PF13291 ACT domain VAPA_1c01830 PF00004 ATPase family associated with various cellular activities (AAA) VAPA_1c01830 PF17862 AAA+ lid domain VAPA_1c01830 PF01434 Peptidase family M41 VAPA_1c01850 PF01156 Inosine-uridine preferring nucleoside hydrolase VAPA_1c01860 PF09382 RQC domain VAPA_1c01860 PF00270 DEAD/DEAH box helicase VAPA_1c01860 PF16124 RecQ zinc-binding VAPA_1c01860 PF00271 Helicase conserved C-terminal domain VAPA_1c01860 PF00570 HRDC domain VAPA_1c01880 PF00528 Binding-protein-dependent transport system inner membrane component VAPA_1c01890 PF00005 ABC transporter VAPA_1c01900 PF00392 Bacterial regulatory proteins, gntR family VAPA_1c01900 PF07702 UTRA domain VAPA_1c01910 PF00221 Aromatic amino acid lyase VAPA_1c01920 PF17391 Urocanase N-terminal domain VAPA_1c01920 PF17392 Urocanase C-terminal domain VAPA_1c01920 PF01175 Urocanase Rossmann-like domain VAPA_1c01930 PF02423 Ornithine cyclodeaminase/mu-crystallin family VAPA_1c01950 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_1c01990 PF05962 HutD VAPA_1c02000 PF01979 Amidohydrolase family VAPA_1c02010 PF01979 Amidohydrolase family VAPA_1c02030 PF02310 B12 binding domain VAPA_1c02030 PF02607 B12 binding domain VAPA_1c02030 PF02965 Vitamin B12 dependent methionine synthase, activation domain VAPA_1c02030 PF00809 Pterin binding enzyme VAPA_1c02030 PF02574 Homocysteine S-methyltransferase VAPA_1c02050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c02050 PF03466 LysR substrate binding domain VAPA_1c02070 PF02310 B12 binding domain VAPA_1c02070 PF02574 Homocysteine S-methyltransferase VAPA_1c02070 PF02965 Vitamin B12 dependent methionine synthase, activation domain VAPA_1c02070 PF02607 B12 binding domain VAPA_1c02070 PF00809 Pterin binding enzyme VAPA_1c02110 PF01979 Amidohydrolase family VAPA_1c02120 PF00440 Bacterial regulatory proteins, tetR family VAPA_1c02120 PF17938 Tetracyclin repressor-like, C-terminal domain VAPA_1c02130 PF00970 Oxidoreductase FAD-binding domain VAPA_1c02130 PF00175 Oxidoreductase NAD-binding domain VAPA_1c02140 PF00037 4Fe-4S binding domain VAPA_1c02180 PF13458 Periplasmic binding protein VAPA_1c02190 PF02653 Branched-chain amino acid transport system / permease component VAPA_1c02200 PF12399 Branched-chain amino acid ATP-binding cassette transporter VAPA_1c02200 PF00005 ABC transporter VAPA_1c02210 PF00005 ABC transporter VAPA_1c02220 PF00857 Isochorismatase family VAPA_1c02240 PF00111 2Fe-2S iron-sulfur cluster binding domain VAPA_1c02240 PF01799 [2Fe-2S] binding domain VAPA_1c02250 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase VAPA_1c02250 PF00034 Cytochrome c VAPA_1c02250 PF13442 Cytochrome C oxidase, cbb3-type, subunit III VAPA_1c02350 PF07724 AAA domain (Cdc48 subfamily) VAPA_1c02350 PF10431 C-terminal, D2-small domain, of ClpB protein VAPA_1c02350 PF00004 ATPase family associated with various cellular activities (AAA) VAPA_1c02350 PF17871 AAA lid domain VAPA_1c02360 PF04717 Type VI secretion system, phage-baseplate injector VAPA_1c02470 PF13677 Membrane MotB of proton-channel complex MotA/MotB VAPA_1c02470 PF00691 OmpA family VAPA_1c02510 PF00069 Protein kinase domain VAPA_1c02510 PF13360 PQQ-like domain VAPA_1c02530 PF13005 zinc-finger binding domain of transposase IS66 VAPA_1c02530 PF13007 Transposase C of IS166 homeodomain VAPA_1c02530 PF13817 IS66 C-terminal element VAPA_1c02530 PF03050 Transposase IS66 family VAPA_1c02540 PF05717 IS66 Orf2 like protein VAPA_1c02650 PF04717 Type VI secretion system, phage-baseplate injector VAPA_1c02740 PF01078 Magnesium chelatase, subunit ChlI VAPA_1c02740 PF13335 Magnesium chelatase, subunit ChlI C-terminal VAPA_1c02760 PF00543 Nitrogen regulatory protein P-II VAPA_1c02770 PF00909 Ammonium Transporter Family VAPA_1c02780 PF08450 SMP-30/Gluconolactonase/LRE-like region VAPA_1c02790 PF03466 LysR substrate binding domain VAPA_1c02790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c02800 PF02913 FAD linked oxidases, C-terminal domain VAPA_1c02800 PF01565 FAD binding domain VAPA_1c02810 PF01565 FAD binding domain VAPA_1c02820 PF13183 4Fe-4S dicluster domain VAPA_1c02820 PF02754 Cysteine-rich domain VAPA_1c02840 PF00255 Glutathione peroxidase VAPA_1c02860 PF07690 Major Facilitator Superfamily VAPA_1c02870 PF00842 Alanine racemase, C-terminal domain VAPA_1c02870 PF01168 Alanine racemase, N-terminal domain VAPA_1c02890 PF08546 Ketopantoate reductase PanE/ApbA C terminal VAPA_1c02890 PF02558 Ketopantoate reductase PanE/ApbA VAPA_1c02900 PF00596 Class II Aldolase and Adducin N-terminal domain VAPA_1c02910 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_1c02920 PF00920 Dehydratase family VAPA_1c02930 PF03328 HpcH/HpaI aldolase/citrate lyase family VAPA_1c02940 PF01557 Fumarylacetoacetate (FAA) hydrolase family VAPA_1c02960 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase VAPA_1c02970 PF00171 Aldehyde dehydrogenase family VAPA_1c02980 PF01557 Fumarylacetoacetate (FAA) hydrolase family VAPA_1c02990 PF01557 Fumarylacetoacetate (FAA) hydrolase family VAPA_1c03000 PF01047 MarR family VAPA_1c03020 PF05593 RHS Repeat VAPA_1c03020 PF03527 RHS protein VAPA_1c03040 PF04717 Type VI secretion system, phage-baseplate injector VAPA_1c03050 PF18073 Rubredoxin metal binding domain VAPA_1c03070 PF03466 LysR substrate binding domain VAPA_1c03070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c03080 PF07690 Major Facilitator Superfamily VAPA_1c03090 PF01546 Peptidase family M20/M25/M40 VAPA_1c03090 PF07687 Peptidase dimerisation domain VAPA_1c03100 PF04381 Putative exonuclease, RdgC VAPA_1c03110 PF01063 Amino-transferase class IV VAPA_1c03150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAPA_1c03150 PF00672 HAMP domain VAPA_1c03150 PF00512 His Kinase A (phospho-acceptor) domain VAPA_1c03160 PF00486 Transcriptional regulatory protein, C terminal VAPA_1c03160 PF00072 Response regulator receiver domain VAPA_1c03170 PF01266 FAD dependent oxidoreductase VAPA_1c03190 PF00109 Beta-ketoacyl synthase, N-terminal domain VAPA_1c03190 PF02801 Beta-ketoacyl synthase, C-terminal domain VAPA_1c03200 PF07690 Major Facilitator Superfamily VAPA_1c03220 PF13495 Phage integrase, N-terminal SAM-like domain VAPA_1c03220 PF00589 Phage integrase family VAPA_1c03230 PF00171 Aldehyde dehydrogenase family VAPA_1c03230 PF01619 Proline dehydrogenase VAPA_1c03230 PF14850 DNA-binding domain of Proline dehydrogenase VAPA_1c03230 PF18327 Proline utilization A proline dehydrogenase N-terminal domain VAPA_1c03240 PF01425 Amidase VAPA_1c03250 PF09084 NMT1/THI5 like VAPA_1c03260 PF00528 Binding-protein-dependent transport system inner membrane component VAPA_1c03270 PF00005 ABC transporter VAPA_1c03290 PF02608 ABC transporter substrate-binding protein PnrA-like VAPA_1c03320 PF00795 Carbon-nitrogen hydrolase VAPA_1c03330 PF00857 Isochorismatase family VAPA_1c03350 PF00857 Isochorismatase family VAPA_1c03360 PF00392 Bacterial regulatory proteins, gntR family VAPA_1c03360 PF07729 FCD domain VAPA_1c03370 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_1c03380 PF01494 FAD binding domain VAPA_1c03390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c03390 PF03466 LysR substrate binding domain VAPA_1c03400 PF03372 Endonuclease/Exonuclease/phosphatase family VAPA_1c03410 PF00156 Phosphoribosyl transferase domain VAPA_1c03430 PF02637 GatB domain VAPA_1c03430 PF02934 GatB/GatE catalytic domain VAPA_1c03440 PF01425 Amidase VAPA_1c03450 PF02686 Glu-tRNAGln amidotransferase C subunit VAPA_1c03490 PF03717 Penicillin-binding Protein dimerisation domain VAPA_1c03490 PF00905 Penicillin binding protein transpeptidase domain VAPA_1c03510 PF04209 homogentisate 1,2-dioxygenase VAPA_1c03530 PF01494 FAD binding domain VAPA_1c03540 PF00753 Metallo-beta-lactamase superfamily VAPA_1c03560 PF02146 Sir2 family VAPA_1c03630 PF09383 NIL domain VAPA_1c03630 PF00005 ABC transporter VAPA_1c03640 PF02405 Permease MlaE VAPA_1c03650 PF03466 LysR substrate binding domain VAPA_1c03650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c03660 PF00732 GMC oxidoreductase VAPA_1c03660 PF05199 GMC oxidoreductase VAPA_1c03680 PF01266 FAD dependent oxidoreductase VAPA_1c03690 PF07992 Pyridine nucleotide-disulphide oxidoreductase VAPA_1c03690 PF04324 BFD-like [2Fe-2S] binding domain VAPA_1c03710 PF00528 Binding-protein-dependent transport system inner membrane component VAPA_1c03720 PF00528 Binding-protein-dependent transport system inner membrane component VAPA_1c03730 PF08402 TOBE domain VAPA_1c03730 PF00005 ABC transporter VAPA_1c03750 PF00171 Aldehyde dehydrogenase family VAPA_1c03780 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VAPA_1c03780 PF00205 Thiamine pyrophosphate enzyme, central domain VAPA_1c03780 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VAPA_1c03800 PF01925 Sulfite exporter TauE/SafE VAPA_1c03820 PF01970 Tripartite tricarboxylate transporter TctA family VAPA_1c03830 PF07331 Tripartite tricarboxylate transporter TctB family VAPA_1c03840 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) VAPA_1c03860 PF01253 Translation initiation factor SUI1 VAPA_1c03870 PF00271 Helicase conserved C-terminal domain VAPA_1c03870 PF00270 DEAD/DEAH box helicase VAPA_1c03880 PF01145 SPFH domain / Band 7 family VAPA_1c03880 PF16200 C-terminal region of band_7 VAPA_1c03890 PF02770 Acyl-CoA dehydrogenase, middle domain VAPA_1c03890 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VAPA_1c03890 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VAPA_1c03900 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VAPA_1c03900 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VAPA_1c03900 PF02770 Acyl-CoA dehydrogenase, middle domain VAPA_1c03920 PF00364 Biotin-requiring enzyme VAPA_1c03920 PF02785 Biotin carboxylase C-terminal domain VAPA_1c03920 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain VAPA_1c03920 PF00289 Biotin carboxylase, N-terminal domain VAPA_1c03930 PF01039 Carboxyl transferase domain VAPA_1c03940 PF03707 Bacterial signalling protein N terminal repeat VAPA_1c03940 PF00990 Diguanylate cyclase, GGDEF domain VAPA_1c03940 PF00563 EAL domain VAPA_1c03960 PF04286 Protein of unknown function (DUF445) VAPA_1c03970 PF01546 Peptidase family M20/M25/M40 VAPA_1c03970 PF07687 Peptidase dimerisation domain VAPA_1c03980 PF03009 Glycerophosphoryl diester phosphodiesterase family VAPA_1c03990 PF07687 Peptidase dimerisation domain VAPA_1c03990 PF01546 Peptidase family M20/M25/M40 VAPA_1c04020 PF01568 Molydopterin dinucleotide binding domain VAPA_1c04020 PF00384 Molybdopterin oxidoreductase VAPA_1c04020 PF04879 Molybdopterin oxidoreductase Fe4S4 domain VAPA_1c04060 PF02782 FGGY family of carbohydrate kinases, C-terminal domain VAPA_1c04060 PF00370 FGGY family of carbohydrate kinases, N-terminal domain VAPA_1c04070 PF08240 Alcohol dehydrogenase GroES-like domain VAPA_1c04070 PF00107 Zinc-binding dehydrogenase VAPA_1c04080 PF02653 Branched-chain amino acid transport system / permease component VAPA_1c04090 PF00005 ABC transporter VAPA_1c04100 PF13407 Periplasmic binding protein domain VAPA_1c04110 PF12833 Helix-turn-helix domain VAPA_1c04120 PF02515 CoA-transferase family III VAPA_1c04180 PF03466 LysR substrate binding domain VAPA_1c04180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c04190 PF07883 Cupin domain VAPA_1c04200 PF01557 Fumarylacetoacetate (FAA) hydrolase family VAPA_1c04210 PF01494 FAD binding domain VAPA_1c04220 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_1c04230 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_1c04240 PF04324 BFD-like [2Fe-2S] binding domain VAPA_1c04240 PF07992 Pyridine nucleotide-disulphide oxidoreductase VAPA_1c04290 PF02653 Branched-chain amino acid transport system / permease component VAPA_1c04300 PF11862 Domain of unknown function (DUF3382) VAPA_1c04300 PF02653 Branched-chain amino acid transport system / permease component VAPA_1c04310 PF12399 Branched-chain amino acid ATP-binding cassette transporter VAPA_1c04310 PF00005 ABC transporter VAPA_1c04320 PF00005 ABC transporter VAPA_1c04330 PF00106 short chain dehydrogenase VAPA_1c04360 PF13417 Glutathione S-transferase, N-terminal domain VAPA_1c04360 PF00043 Glutathione S-transferase, C-terminal domain VAPA_1c04380 PF01740 STAS domain VAPA_1c04380 PF00916 Sulfate permease family VAPA_1c04400 PF00005 ABC transporter VAPA_1c04410 PF12399 Branched-chain amino acid ATP-binding cassette transporter VAPA_1c04410 PF00005 ABC transporter VAPA_1c04420 PF11862 Domain of unknown function (DUF3382) VAPA_1c04420 PF02653 Branched-chain amino acid transport system / permease component VAPA_1c04430 PF02653 Branched-chain amino acid transport system / permease component VAPA_1c04450 PF00137 ATP synthase subunit C VAPA_1c04470 PF01791 DeoC/LacD family aldolase VAPA_1c04480 PF00248 Aldo/keto reductase family VAPA_1c04490 PF02653 Branched-chain amino acid transport system / permease component VAPA_1c04500 PF00005 ABC transporter VAPA_1c04520 PF02782 FGGY family of carbohydrate kinases, C-terminal domain VAPA_1c04520 PF00370 FGGY family of carbohydrate kinases, N-terminal domain VAPA_1c04530 PF16901 C-terminal domain of alpha-glycerophosphate oxidase VAPA_1c04530 PF01266 FAD dependent oxidoreductase VAPA_1c04560 PF17760 UvrA interaction domain VAPA_1c04560 PF17755 UvrA DNA-binding domain VAPA_1c04570 PF00436 Single-strand binding protein family VAPA_1c04600 PF01709 Transcriptional regulator VAPA_1c04630 PF00296 Luciferase-like monooxygenase VAPA_1c04670 PF00486 Transcriptional regulatory protein, C terminal VAPA_1c04670 PF00072 Response regulator receiver domain VAPA_1c04670 PF01627 Hpt domain VAPA_1c04680 PF05222 Alanine dehydrogenase/PNT, N-terminal domain VAPA_1c04680 PF01262 Alanine dehydrogenase/PNT, C-terminal domain VAPA_1c04690 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch VAPA_1c04700 PF02233 NAD(P) transhydrogenase beta subunit VAPA_1c04710 PF00501 AMP-binding enzyme VAPA_1c04710 PF13193 AMP-binding enzyme C-terminal domain VAPA_1c04720 PF00528 Binding-protein-dependent transport system inner membrane component VAPA_1c04730 PF12911 N-terminal TM domain of oligopeptide transport permease C VAPA_1c04730 PF00528 Binding-protein-dependent transport system inner membrane component VAPA_1c04740 PF00005 ABC transporter VAPA_1c04740 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VAPA_1c04750 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VAPA_1c04750 PF00005 ABC transporter VAPA_1c04770 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VAPA_1c04780 PF01048 Phosphorylase superfamily VAPA_1c04790 PF01544 CorA-like Mg2+ transporter protein VAPA_1c04800 PF00580 UvrD/REP helicase N-terminal domain VAPA_1c04800 PF13361 UvrD-like helicase C-terminal domain VAPA_1c04810 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein VAPA_1c04820 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VAPA_1c04830 PF07475 HPr Serine kinase C-terminal domain VAPA_1c04830 PF02603 HPr Serine kinase N terminus VAPA_1c04840 PF01475 Ferric uptake regulator family VAPA_1c04850 PF04355 SmpA / OmlA family VAPA_1c04870 PF01618 MotA/TolQ/ExbB proton channel family VAPA_1c04880 PF02472 Biopolymer transport protein ExbD/TolR VAPA_1c04900 PF01037 Lrp/AsnC ligand binding domain VAPA_1c04910 PF00343 Carbohydrate phosphorylase VAPA_1c04920 PF08323 Starch synthase catalytic domain VAPA_1c04920 PF00534 Glycosyl transferases group 1 VAPA_1c04930 PF00483 Nucleotidyl transferase VAPA_1c04940 PF18390 Glycogen debranching enzyme C-terminal domain VAPA_1c04940 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) VAPA_1c04940 PF00128 Alpha amylase, catalytic domain VAPA_1c04950 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) VAPA_1c04950 PF02806 Alpha amylase, C-terminal all-beta domain VAPA_1c04950 PF00128 Alpha amylase, catalytic domain VAPA_1c04960 PF00128 Alpha amylase, catalytic domain VAPA_1c04970 PF13454 FAD-NAD(P)-binding VAPA_1c05010 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_1c05020 PF09334 tRNA synthetases class I (M) VAPA_1c05020 PF00133 tRNA synthetases class I (I, L, M and V) VAPA_1c05020 PF13603 Leucyl-tRNA synthetase, Domain 2 VAPA_1c05020 PF08264 Anticodon-binding domain of tRNA VAPA_1c05050 PF00171 Aldehyde dehydrogenase family VAPA_1c05070 PF02705 K+ potassium transporter VAPA_1c05110 PF03594 Benzoate membrane transport protein VAPA_1c05120 PF02951 Prokaryotic glutathione synthetase, N-terminal domain VAPA_1c05120 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain VAPA_1c05140 PF07715 TonB-dependent Receptor Plug Domain VAPA_1c05140 PF00593 TonB dependent receptor VAPA_1c05150 PF13230 Glutamine amidotransferases class-II VAPA_1c05170 PF07690 Major Facilitator Superfamily VAPA_1c05180 PF10005 zinc-ribbon domain VAPA_1c05180 PF15887 Putative zinc-binding metallo-peptidase VAPA_1c05200 PF00365 Phosphofructokinase VAPA_1c05220 PF00378 Enoyl-CoA hydratase/isomerase VAPA_1c05230 PF02803 Thiolase, C-terminal domain VAPA_1c05230 PF00108 Thiolase, N-terminal domain VAPA_1c05250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c05250 PF03466 LysR substrate binding domain VAPA_1c05260 PF02469 Fasciclin domain VAPA_1c05300 PF01274 Malate synthase VAPA_1c05310 PF13419 Haloacid dehalogenase-like hydrolase VAPA_1c05320 PF01614 Bacterial transcriptional regulator VAPA_1c05320 PF09339 IclR helix-turn-helix domain VAPA_1c05330 PF00682 HMGL-like VAPA_1c05340 PF02515 CoA-transferase family III VAPA_1c05350 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_1c05370 PF03466 LysR substrate binding domain VAPA_1c05370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c05410 PF00750 tRNA synthetases class I (R) VAPA_1c05410 PF05746 DALR anticodon binding domain VAPA_1c05410 PF03485 Arginyl tRNA synthetase N terminal domain VAPA_1c05430 PF00085 Thioredoxin VAPA_1c05430 PF01323 DSBA-like thioredoxin domain VAPA_1c05440 PF03968 OstA-like protein VAPA_1c05450 PF00005 ABC transporter VAPA_1c05460 PF00309 Sigma-54 factor, Activator interacting domain (AID) VAPA_1c05460 PF04963 Sigma-54 factor, core binding domain VAPA_1c05460 PF04552 Sigma-54, DNA binding domain VAPA_1c05470 PF13091 PLD-like domain VAPA_1c05520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAPA_1c05520 PF00512 His Kinase A (phospho-acceptor) domain VAPA_1c05530 PF01170 Putative RNA methylase family UPF0020 VAPA_1c05530 PF02926 THUMP domain VAPA_1c05590 PF01645 Conserved region in glutamate synthase VAPA_1c05600 PF02810 SEC-C motif VAPA_1c05600 PF07517 SecA DEAD-like domain VAPA_1c05600 PF01043 SecA preprotein cross-linking domain VAPA_1c05600 PF07516 SecA Wing and Scaffold domain VAPA_1c05640 PF02464 Competence-damaged protein VAPA_1c05650 PF04608 Phosphatidylglycerophosphatase A VAPA_1c05660 PF07690 Major Facilitator Superfamily VAPA_1c05680 PF02769 AIR synthase related protein, C-terminal domain VAPA_1c05680 PF00586 AIR synthase related protein, N-terminal domain VAPA_1c05690 PF00857 Isochorismatase family VAPA_1c05710 PF04107 Glutamate-cysteine ligase family 2(GCS2) VAPA_1c05740 PF04379 ApaG domain VAPA_1c05750 PF00834 Ribulose-phosphate 3 epimerase family VAPA_1c05780 PF02735 Ku70/Ku80 beta-barrel domain VAPA_1c05790 PF04679 ATP dependent DNA ligase C terminal region VAPA_1c05790 PF13298 DNA polymerase Ligase (LigD) VAPA_1c05790 PF01068 ATP dependent DNA ligase domain VAPA_1c05820 PF06628 Catalase-related immune-responsive VAPA_1c05820 PF18011 C-terminal domain found in long catalases VAPA_1c05820 PF00199 Catalase VAPA_1c05870 PF00512 His Kinase A (phospho-acceptor) domain VAPA_1c05870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAPA_1c05890 PF00672 HAMP domain VAPA_1c05890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAPA_1c05890 PF00512 His Kinase A (phospho-acceptor) domain VAPA_1c05890 PF01627 Hpt domain VAPA_1c05890 PF00072 Response regulator receiver domain VAPA_1c05930 PF13677 Membrane MotB of proton-channel complex MotA/MotB VAPA_1c05930 PF00691 OmpA family VAPA_1c05960 PF00069 Protein kinase domain VAPA_1c06070 PF07724 AAA domain (Cdc48 subfamily) VAPA_1c06070 PF00004 ATPase family associated with various cellular activities (AAA) VAPA_1c06070 PF17871 AAA lid domain VAPA_1c06070 PF10431 C-terminal, D2-small domain, of ClpB protein VAPA_1c06080 PF04717 Type VI secretion system, phage-baseplate injector VAPA_1c06130 PF04717 Type VI secretion system, phage-baseplate injector VAPA_1c06130 PF16671 Actin cross-linking domain VAPA_1c06240 PF05638 Type VI secretion system effector, Hcp VAPA_1c06310 PF00072 Response regulator receiver domain VAPA_1c06310 PF00196 Bacterial regulatory proteins, luxR family VAPA_1c06340 PF02769 AIR synthase related protein, C-terminal domain VAPA_1c06340 PF00586 AIR synthase related protein, N-terminal domain VAPA_1c06370 PF00795 Carbon-nitrogen hydrolase VAPA_1c06400 PF00392 Bacterial regulatory proteins, gntR family VAPA_1c06400 PF00155 Aminotransferase class I and II VAPA_1c06560 PF00149 Calcineurin-like phosphoesterase VAPA_1c06590 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_1c06600 PF02515 CoA-transferase family III VAPA_1c06640 PF03480 Bacterial extracellular solute-binding protein, family 7 VAPA_1c06650 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VAPA_1c06660 PF01370 NAD dependent epimerase/dehydratase family VAPA_1c06670 PF03992 Antibiotic biosynthesis monooxygenase VAPA_1c06680 PF02230 Phospholipase/Carboxylesterase VAPA_1c06720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c06720 PF03466 LysR substrate binding domain VAPA_1c06730 PF04333 MlaA lipoprotein VAPA_1c06770 PF00072 Response regulator receiver domain VAPA_1c06770 PF00486 Transcriptional regulatory protein, C terminal VAPA_1c06780 PF00512 His Kinase A (phospho-acceptor) domain VAPA_1c06780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAPA_1c06790 PF00486 Transcriptional regulatory protein, C terminal VAPA_1c06790 PF00072 Response regulator receiver domain VAPA_1c06800 PF00873 AcrB/AcrD/AcrF family VAPA_1c06820 PF02321 Outer membrane efflux protein VAPA_1c06830 PF03466 LysR substrate binding domain VAPA_1c06830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c06840 PF01361 Tautomerase enzyme VAPA_1c06850 PF12697 Alpha/beta hydrolase family VAPA_1c06860 PF13417 Glutathione S-transferase, N-terminal domain VAPA_1c06870 PF00005 ABC transporter VAPA_1c06880 PF00005 ABC transporter VAPA_1c06880 PF12399 Branched-chain amino acid ATP-binding cassette transporter VAPA_1c06890 PF02653 Branched-chain amino acid transport system / permease component VAPA_1c06910 PF13458 Periplasmic binding protein VAPA_1c06920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c06920 PF03466 LysR substrate binding domain VAPA_1c06930 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_1c06960 PF00171 Aldehyde dehydrogenase family VAPA_1c06970 PF00732 GMC oxidoreductase VAPA_1c06970 PF05199 GMC oxidoreductase VAPA_1c06990 PF07883 Cupin domain VAPA_1c07000 PF01557 Fumarylacetoacetate (FAA) hydrolase family VAPA_1c07010 PF07992 Pyridine nucleotide-disulphide oxidoreductase VAPA_1c07010 PF14759 Reductase C-terminal VAPA_1c07020 PF00355 Rieske [2Fe-2S] domain VAPA_1c07030 PF13577 SnoaL-like domain VAPA_1c07040 PF00355 Rieske [2Fe-2S] domain VAPA_1c07040 PF00848 Ring hydroxylating alpha subunit (catalytic domain) VAPA_1c07050 PF03466 LysR substrate binding domain VAPA_1c07050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c07060 PF01613 Flavin reductase like domain VAPA_1c07070 PF00296 Luciferase-like monooxygenase VAPA_1c07080 PF00158 Sigma-54 interaction domain VAPA_1c07080 PF02954 Bacterial regulatory protein, Fis family VAPA_1c07080 PF01590 GAF domain VAPA_1c07090 PF01609 Transposase DDE domain VAPA_1c07100 PF13340 Putative transposase of IS4/5 family (DUF4096) VAPA_1c07110 PF14698 Argininosuccinate lyase C-terminal VAPA_1c07110 PF00206 Lyase VAPA_1c07120 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_1c07140 PF17645 Arylmalonate decarboxylase VAPA_1c07150 PF03466 LysR substrate binding domain VAPA_1c07150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c07180 PF00550 Phosphopantetheine attachment site VAPA_1c07180 PF00668 Condensation domain VAPA_1c07180 PF13193 AMP-binding enzyme C-terminal domain VAPA_1c07180 PF00501 AMP-binding enzyme VAPA_1c07210 PF13419 Haloacid dehalogenase-like hydrolase VAPA_1c07230 PF04715 Anthranilate synthase component I, N terminal region VAPA_1c07230 PF00425 chorismate binding enzyme VAPA_1c07250 PF00117 Glutamine amidotransferase class-I VAPA_1c07260 PF01212 Beta-eliminating lyase VAPA_1c07270 PF01810 LysE type translocator VAPA_1c07280 PF02885 Glycosyl transferase family, helical bundle domain VAPA_1c07280 PF00591 Glycosyl transferase family, a/b domain VAPA_1c07290 PF00218 Indole-3-glycerol phosphate synthase VAPA_1c07300 PF03167 Uracil DNA glycosylase superfamily VAPA_1c07340 PF00009 Elongation factor Tu GTP binding domain VAPA_1c07340 PF03144 Elongation factor Tu domain 2 VAPA_1c07340 PF03143 Elongation factor Tu C-terminal domain VAPA_1c07370 PF02357 Transcription termination factor nusG VAPA_1c07370 PF00467 KOW motif VAPA_1c07380 PF00298 Ribosomal protein L11, RNA binding domain VAPA_1c07380 PF03946 Ribosomal protein L11, N-terminal domain VAPA_1c07390 PF00687 Ribosomal protein L1p/L10e family VAPA_1c07400 PF00466 Ribosomal protein L10 VAPA_1c07410 PF00542 Ribosomal protein L7/L12 C-terminal domain VAPA_1c07410 PF16320 Ribosomal protein L7/L12 dimerisation domain VAPA_1c07420 PF04560 RNA polymerase Rpb2, domain 7 VAPA_1c07420 PF00562 RNA polymerase Rpb2, domain 6 VAPA_1c07420 PF04561 RNA polymerase Rpb2, domain 2 VAPA_1c07420 PF04565 RNA polymerase Rpb2, domain 3 VAPA_1c07420 PF10385 RNA polymerase beta subunit external 1 domain VAPA_1c07420 PF04563 RNA polymerase beta subunit VAPA_1c07430 PF04998 RNA polymerase Rpb1, domain 5 VAPA_1c07430 PF04997 RNA polymerase Rpb1, domain 1 VAPA_1c07430 PF00623 RNA polymerase Rpb1, domain 2 VAPA_1c07430 PF04983 RNA polymerase Rpb1, domain 3 VAPA_1c07430 PF05000 RNA polymerase Rpb1, domain 4 VAPA_1c07450 PF01189 16S rRNA methyltransferase RsmB/F VAPA_1c07450 PF01029 NusB family VAPA_1c07470 PF00989 PAS fold VAPA_1c07470 PF00512 His Kinase A (phospho-acceptor) domain VAPA_1c07470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAPA_1c07470 PF00672 HAMP domain VAPA_1c07480 PF02954 Bacterial regulatory protein, Fis family VAPA_1c07480 PF00158 Sigma-54 interaction domain VAPA_1c07480 PF00072 Response regulator receiver domain VAPA_1c07540 PF02203 Tar ligand binding domain homologue VAPA_1c07540 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAPA_1c07540 PF00672 HAMP domain VAPA_1c07560 PF01738 Dienelactone hydrolase family VAPA_1c07560 PF00156 Phosphoribosyl transferase domain VAPA_1c07630 PF04945 YHS domain VAPA_1c07640 PF01425 Amidase VAPA_1c07650 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_1c07660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c07660 PF03466 LysR substrate binding domain VAPA_1c07670 PF00216 Bacterial DNA-binding protein VAPA_1c07680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c07680 PF03466 LysR substrate binding domain VAPA_1c07720 PF00563 EAL domain VAPA_1c07720 PF03707 Bacterial signalling protein N terminal repeat VAPA_1c07720 PF00990 Diguanylate cyclase, GGDEF domain VAPA_1c07730 PF00512 His Kinase A (phospho-acceptor) domain VAPA_1c07730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAPA_1c07730 PF00672 HAMP domain VAPA_1c07740 PF02540 NAD synthase VAPA_1c07750 PF02253 Phospholipase A1 VAPA_1c07770 PF13361 UvrD-like helicase C-terminal domain VAPA_1c07770 PF00580 UvrD/REP helicase N-terminal domain VAPA_1c07780 PF03547 Membrane transport protein VAPA_1c07810 PF18319 PriA DNA helicase Cys-rich region (CRR) domain VAPA_1c07810 PF18074 Primosomal protein N C-terminal domain VAPA_1c07810 PF17764 3′ DNA-binding domain (3′BD) VAPA_1c07810 PF00271 Helicase conserved C-terminal domain VAPA_1c07810 PF00270 DEAD/DEAH box helicase VAPA_1c07820 PF01208 Uroporphyrinogen decarboxylase (URO-D) VAPA_1c07830 PF07690 Major Facilitator Superfamily VAPA_1c07840 PF00578 AhpC/TSA family VAPA_1c07860 PF02272 DHHA1 domain VAPA_1c07860 PF01411 tRNA synthetases class II (A) VAPA_1c07860 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain VAPA_1c07870 PF07995 Glucose / Sorbosone dehydrogenase VAPA_1c07890 PF08240 Alcohol dehydrogenase GroES-like domain VAPA_1c07890 PF00107 Zinc-binding dehydrogenase VAPA_1c07900 PF03466 LysR substrate binding domain VAPA_1c07900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c07910 PF00106 short chain dehydrogenase VAPA_1c07930 PF00535 Glycosyl transferase family 2 VAPA_1c07940 PF01522 Polysaccharide deacetylase VAPA_1c07940 PF14883 Hypothetical glycosyl hydrolase family 13 VAPA_1c07960 PF02633 Creatinine amidohydrolase VAPA_1c08000 PF00654 Voltage gated chloride channel VAPA_1c08010 PF01810 LysE type translocator VAPA_1c08030 PF02567 Phenazine biosynthesis-like protein VAPA_1c08040 PF13417 Glutathione S-transferase, N-terminal domain VAPA_1c08040 PF00043 Glutathione S-transferase, C-terminal domain VAPA_1c08050 PF01810 LysE type translocator VAPA_1c08070 PF00155 Aminotransferase class I and II VAPA_1c08080 PF00892 EamA-like transporter family VAPA_1c08130 PF01266 FAD dependent oxidoreductase VAPA_1c08140 PF16363 GDP-mannose 4,6 dehydratase VAPA_1c08150 PF04321 RmlD substrate binding domain VAPA_1c08160 PF00483 Nucleotidyl transferase VAPA_1c08170 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase VAPA_1c08180 PF00535 Glycosyl transferase family 2 VAPA_1c08180 PF13181 Tetratricopeptide repeat VAPA_1c08210 PF17843 MycE methyltransferase N-terminal VAPA_1c08230 PF16363 GDP-mannose 4,6 dehydratase VAPA_1c08240 PF16363 GDP-mannose 4,6 dehydratase VAPA_1c08250 PF00535 Glycosyl transferase family 2 VAPA_1c08250 PF00534 Glycosyl transferases group 1 VAPA_1c08260 PF00005 ABC transporter VAPA_1c08270 PF01061 ABC-2 type transporter VAPA_1c08280 PF00483 Nucleotidyl transferase VAPA_1c08280 PF01050 Mannose-6-phosphate isomerase VAPA_1c08290 PF00535 Glycosyl transferase family 2 VAPA_1c08300 PF00535 Glycosyl transferase family 2 VAPA_1c08310 PF00535 Glycosyl transferase family 2 VAPA_1c08320 PF01757 Acyltransferase family VAPA_1c08340 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 VAPA_1c08340 PF00953 Glycosyl transferase family 4 VAPA_1c08350 PF00696 Amino acid kinase family VAPA_1c08360 PF00535 Glycosyl transferase family 2 VAPA_1c08370 PF00535 Glycosyl transferase family 2 VAPA_1c08380 PF16363 GDP-mannose 4,6 dehydratase VAPA_1c08390 PF00440 Bacterial regulatory proteins, tetR family VAPA_1c08420 PF00892 EamA-like transporter family VAPA_1c08430 PF02615 Malate/L-lactate dehydrogenase VAPA_1c08440 PF08666 SAF domain VAPA_1c08440 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus VAPA_1c08450 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VAPA_1c08470 PF03480 Bacterial extracellular solute-binding protein, family 7 VAPA_1c08480 PF00392 Bacterial regulatory proteins, gntR family VAPA_1c08480 PF07729 FCD domain VAPA_1c08510 PF01557 Fumarylacetoacetate (FAA) hydrolase family VAPA_1c08520 PF00392 Bacterial regulatory proteins, gntR family VAPA_1c08520 PF07702 UTRA domain VAPA_1c08530 PF13458 Periplasmic binding protein VAPA_1c08540 PF02653 Branched-chain amino acid transport system / permease component VAPA_1c08550 PF02653 Branched-chain amino acid transport system / permease component VAPA_1c08550 PF11862 Domain of unknown function (DUF3382) VAPA_1c08560 PF12399 Branched-chain amino acid ATP-binding cassette transporter VAPA_1c08560 PF00005 ABC transporter VAPA_1c08570 PF00005 ABC transporter VAPA_1c08580 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_1c08590 PF00330 Aconitase family (aconitate hydratase) VAPA_1c08600 PF00694 Aconitase C-terminal domain VAPA_1c08620 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_1c08630 PF02538 Hydantoinase B/oxoprolinase VAPA_1c08640 PF05378 Hydantoinase/oxoprolinase N-terminal region VAPA_1c08640 PF01968 Hydantoinase/oxoprolinase VAPA_1c08660 PF01494 FAD binding domain VAPA_1c08680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c08680 PF03466 LysR substrate binding domain VAPA_1c08690 PF00106 short chain dehydrogenase VAPA_1c08710 PF02770 Acyl-CoA dehydrogenase, middle domain VAPA_1c08710 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VAPA_1c08710 PF12806 Acetyl-CoA dehydrogenase C-terminal like VAPA_1c08710 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VAPA_1c08730 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain VAPA_1c08730 PF00378 Enoyl-CoA hydratase/isomerase VAPA_1c08730 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain VAPA_1c08740 PF04480 Protein of unknown function (DUF559) VAPA_1c08750 PF02803 Thiolase, C-terminal domain VAPA_1c08750 PF00108 Thiolase, N-terminal domain VAPA_1c08780 PF00106 short chain dehydrogenase VAPA_1c08790 PF01323 DSBA-like thioredoxin domain VAPA_1c08800 PF00378 Enoyl-CoA hydratase/isomerase VAPA_1c08810 PF13458 Periplasmic binding protein VAPA_1c08820 PF03061 Thioesterase superfamily VAPA_1c08830 PF00005 ABC transporter VAPA_1c08830 PF00664 ABC transporter transmembrane region VAPA_1c08840 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VAPA_1c08840 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VAPA_1c08850 PF01425 Amidase VAPA_1c08860 PF03466 LysR substrate binding domain VAPA_1c08860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c08870 PF10415 Fumarase C C-terminus VAPA_1c08870 PF00206 Lyase VAPA_1c08880 PF00497 Bacterial extracellular solute-binding proteins, family 3 VAPA_1c08890 PF00528 Binding-protein-dependent transport system inner membrane component VAPA_1c08900 PF00528 Binding-protein-dependent transport system inner membrane component VAPA_1c08910 PF00005 ABC transporter VAPA_1c08920 PF01156 Inosine-uridine preferring nucleoside hydrolase VAPA_1c08930 PF03480 Bacterial extracellular solute-binding protein, family 7 VAPA_1c08940 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) VAPA_1c08950 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VAPA_1c08960 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component VAPA_1c08970 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_1c08980 PF00501 AMP-binding enzyme VAPA_1c08980 PF13193 AMP-binding enzyme C-terminal domain VAPA_1c08990 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_1c09000 PF02515 CoA-transferase family III VAPA_1c09010 PF00378 Enoyl-CoA hydratase/isomerase VAPA_1c09020 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VAPA_1c09020 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VAPA_1c09020 PF02770 Acyl-CoA dehydrogenase, middle domain VAPA_1c09030 PF02770 Acyl-CoA dehydrogenase, middle domain VAPA_1c09030 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VAPA_1c09030 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VAPA_1c09040 PF02803 Thiolase, C-terminal domain VAPA_1c09040 PF00108 Thiolase, N-terminal domain VAPA_1c09050 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain VAPA_1c09050 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain VAPA_1c09050 PF00378 Enoyl-CoA hydratase/isomerase VAPA_1c09060 PF03466 LysR substrate binding domain VAPA_1c09060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c09080 PF04115 Ureidoglycolate lyase VAPA_1c09110 PF01425 Amidase VAPA_1c09120 PF00005 ABC transporter VAPA_1c09120 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VAPA_1c09130 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VAPA_1c09130 PF00005 ABC transporter VAPA_1c09140 PF12911 N-terminal TM domain of oligopeptide transport permease C VAPA_1c09140 PF00528 Binding-protein-dependent transport system inner membrane component VAPA_1c09160 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VAPA_1c09180 PF03466 LysR substrate binding domain VAPA_1c09180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c09190 PF01979 Amidohydrolase family VAPA_1c09220 PF01435 Peptidase family M48 VAPA_1c09240 PF04352 ProQ/FINO family VAPA_1c09240 PF17516 ProQ C-terminal domain VAPA_1c09250 PF01613 Flavin reductase like domain VAPA_1c09270 PF00291 Pyridoxal-phosphate dependent enzyme VAPA_1c09280 PF01047 MarR family VAPA_1c09300 PF07869 Protein of unknown function (DUF1656) VAPA_1c09310 PF13533 Biotin-lipoyl like VAPA_1c09320 PF02321 Outer membrane efflux protein VAPA_1c09330 PF07690 Major Facilitator Superfamily VAPA_1c09350 PF00849 RNA pseudouridylate synthase VAPA_1c09350 PF01479 S4 domain VAPA_1c09360 PF16123 Hydroxyacylglutathione hydrolase C-terminus VAPA_1c09360 PF00753 Metallo-beta-lactamase superfamily VAPA_1c09370 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_1c09400 PF01979 Amidohydrolase family VAPA_1c09440 PF04185 Phosphoesterase family VAPA_1c09440 PF05506 Domain of unknown function (DUF756) VAPA_1c09460 PF00248 Aldo/keto reductase family VAPA_1c09470 PF07690 Major Facilitator Superfamily VAPA_1c09490 PF03466 LysR substrate binding domain VAPA_1c09490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c09520 PF01678 Diaminopimelate epimerase VAPA_1c09550 PF00589 Phage integrase family VAPA_1c09550 PF02899 Phage integrase, N-terminal SAM-like domain VAPA_1c09560 PF17785 PUA-like domain VAPA_1c09560 PF10672 S-adenosylmethionine-dependent methyltransferase VAPA_1c09570 PF02492 CobW/HypB/UreG, nucleotide-binding domain VAPA_1c09570 PF07683 Cobalamin synthesis protein cobW C-terminal domain VAPA_1c09590 PF01258 Prokaryotic dksA/traR C4-type zinc finger VAPA_1c09610 PF00227 Proteasome subunit VAPA_1c09620 PF00004 ATPase family associated with various cellular activities (AAA) VAPA_1c09620 PF07724 AAA domain (Cdc48 subfamily) VAPA_1c09630 PF02381 MraZ protein, putative antitoxin-like VAPA_1c09640 PF01795 MraW methylase family VAPA_1c09650 PF04999 Cell division protein FtsL VAPA_1c09660 PF00905 Penicillin binding protein transpeptidase domain VAPA_1c09660 PF03717 Penicillin-binding Protein dimerisation domain VAPA_1c09670 PF08245 Mur ligase middle domain VAPA_1c09670 PF02875 Mur ligase family, glutamate ligase domain VAPA_1c09680 PF08245 Mur ligase middle domain VAPA_1c09680 PF01225 Mur ligase family, catalytic domain VAPA_1c09680 PF02875 Mur ligase family, glutamate ligase domain VAPA_1c09690 PF00953 Glycosyl transferase family 4 VAPA_1c09690 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 VAPA_1c09700 PF02875 Mur ligase family, glutamate ligase domain VAPA_1c09700 PF08245 Mur ligase middle domain VAPA_1c09710 PF01098 Cell cycle protein VAPA_1c09720 PF03033 Glycosyltransferase family 28 N-terminal domain VAPA_1c09720 PF04101 Glycosyltransferase family 28 C-terminal domain VAPA_1c09730 PF08245 Mur ligase middle domain VAPA_1c09730 PF02875 Mur ligase family, glutamate ligase domain VAPA_1c09730 PF01225 Mur ligase family, catalytic domain VAPA_1c09740 PF07478 D-ala D-ala ligase C-terminus VAPA_1c09740 PF01820 D-ala D-ala ligase N-terminus VAPA_1c09750 PF03799 Cell division protein FtsQ VAPA_1c09750 PF08478 POTRA domain, FtsQ-type VAPA_1c09760 PF02491 SHS2 domain inserted in FTSA VAPA_1c09770 PF12327 FtsZ family, C-terminal domain VAPA_1c09770 PF00091 Tubulin/FtsZ family, GTPase domain VAPA_1c09780 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase VAPA_1c09800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c09800 PF03466 LysR substrate binding domain VAPA_1c09820 PF02075 Crossover junction endodeoxyribonuclease RuvC VAPA_1c09860 PF00912 Transglycosylase VAPA_1c09870 PF18317 Shikimate 5'-dehydrogenase C-terminal domain VAPA_1c09870 PF01488 Shikimate / quinate 5-dehydrogenase VAPA_1c09870 PF08501 Shikimate dehydrogenase substrate binding domain VAPA_1c09890 PF17876 Cold shock domain VAPA_1c09890 PF00773 RNB domain VAPA_1c09890 PF08206 Ribonuclease B OB domain VAPA_1c09890 PF00575 S1 RNA binding domain VAPA_1c09900 PF05728 Uncharacterised protein family (UPF0227) VAPA_1c09910 PF00196 Bacterial regulatory proteins, luxR family VAPA_1c09910 PF00072 Response regulator receiver domain VAPA_1c09930 PF01098 Cell cycle protein VAPA_1c09940 PF01523 Putative modulator of DNA gyrase VAPA_1c09960 PF00793 DAHP synthetase I family VAPA_1c09980 PF01225 Mur ligase family, catalytic domain VAPA_1c09980 PF02875 Mur ligase family, glutamate ligase domain VAPA_1c09980 PF08245 Mur ligase middle domain VAPA_1c10000 PF00578 AhpC/TSA family VAPA_1c10010 PF00364 Biotin-requiring enzyme VAPA_1c10020 PF02785 Biotin carboxylase C-terminal domain VAPA_1c10020 PF00289 Biotin carboxylase, N-terminal domain VAPA_1c10020 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain VAPA_1c10050 PF00294 pfkB family carbohydrate kinase VAPA_1c10070 PF00268 Ribonucleotide reductase, small chain VAPA_1c10080 PF03477 ATP cone domain VAPA_1c10080 PF02867 Ribonucleotide reductase, barrel domain VAPA_1c10080 PF00317 Ribonucleotide reductase, all-alpha domain VAPA_1c10090 PF01510 N-acetylmuramoyl-L-alanine amidase VAPA_1c10100 PF02954 Bacterial regulatory protein, Fis family VAPA_1c10100 PF00158 Sigma-54 interaction domain VAPA_1c10100 PF00072 Response regulator receiver domain VAPA_1c10110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAPA_1c10110 PF00512 His Kinase A (phospho-acceptor) domain VAPA_1c10140 PF02881 SRP54-type protein, helical bundle domain VAPA_1c10140 PF02978 Signal peptide binding domain VAPA_1c10140 PF00448 SRP54-type protein, GTPase domain VAPA_1c10190 PF00072 Response regulator receiver domain VAPA_1c10190 PF00158 Sigma-54 interaction domain VAPA_1c10210 PF00512 His Kinase A (phospho-acceptor) domain VAPA_1c10210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAPA_1c10220 PF04055 Radical SAM superfamily VAPA_1c10220 PF00919 Uncharacterized protein family UPF0004 VAPA_1c10220 PF01938 TRAM domain VAPA_1c10240 PF13533 Biotin-lipoyl like VAPA_1c10250 PF00873 AcrB/AcrD/AcrF family VAPA_1c10260 PF00300 Histidine phosphatase superfamily (branch 1) VAPA_1c10280 PF01171 PP-loop family VAPA_1c10320 PF02668 Taurine catabolism dioxygenase TauD, TfdA family VAPA_1c10330 PF17263 Family of unknown function (DUF5329) VAPA_1c10340 PF00459 Inositol monophosphatase family VAPA_1c10360 PF00480 ROK family VAPA_1c10370 PF00155 Aminotransferase class I and II VAPA_1c10370 PF00392 Bacterial regulatory proteins, gntR family VAPA_1c10390 PF00982 Glycosyltransferase family 20 VAPA_1c10400 PF00723 Glycosyl hydrolases family 15 VAPA_1c10410 PF02358 Trehalose-phosphatase VAPA_1c10420 PF01743 Poly A polymerase head domain VAPA_1c10420 PF12627 Probable RNA and SrmB- binding site of polymerase A VAPA_1c10420 PF01966 HD domain VAPA_1c10440 PF02798 Glutathione S-transferase, N-terminal domain VAPA_1c10440 PF00043 Glutathione S-transferase, C-terminal domain VAPA_1c10450 PF02308 MgtC family VAPA_1c10460 PF01464 Transglycosylase SLT domain VAPA_1c10460 PF14718 Soluble lytic murein transglycosylase L domain VAPA_1c10470 PF01812 5-formyltetrahydrofolate cyclo-ligase family VAPA_1c10480 PF03466 LysR substrate binding domain VAPA_1c10480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c10540 PF13545 Crp-like helix-turn-helix domain VAPA_1c10540 PF00027 Cyclic nucleotide-binding domain VAPA_1c10580 PF00132 Bacterial transferase hexapeptide (six repeats) VAPA_1c10580 PF12804 MobA-like NTP transferase domain VAPA_1c10590 PF01037 Lrp/AsnC ligand binding domain VAPA_1c10600 PF01380 SIS domain VAPA_1c10620 PF00196 Bacterial regulatory proteins, luxR family VAPA_1c10620 PF00072 Response regulator receiver domain VAPA_1c10670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c10670 PF03466 LysR substrate binding domain VAPA_1c10680 PF07690 Major Facilitator Superfamily VAPA_1c10680 PF00083 Sugar (and other) transporter VAPA_1c10710 PF01740 STAS domain VAPA_1c10710 PF00916 Sulfate permease family VAPA_1c10750 PF01541 GIY-YIG catalytic domain VAPA_1c10760 PF00676 Dehydrogenase E1 component VAPA_1c10760 PF12573 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal VAPA_1c10770 PF02780 Transketolase, C-terminal domain VAPA_1c10770 PF02779 Transketolase, pyrimidine binding domain VAPA_1c10780 PF00364 Biotin-requiring enzyme VAPA_1c10780 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) VAPA_1c10780 PF02817 e3 binding domain VAPA_1c10800 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_1c10810 PF00180 Isocitrate/isopropylmalate dehydrogenase VAPA_1c10820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c10820 PF03466 LysR substrate binding domain VAPA_1c10840 PF13406 Transglycosylase SLT domain VAPA_1c10890 PF00892 EamA-like transporter family VAPA_1c10900 PF03466 LysR substrate binding domain VAPA_1c10900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c10920 PF01263 Aldose 1-epimerase VAPA_1c10930 PF08450 SMP-30/Gluconolactonase/LRE-like region VAPA_1c10950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c10950 PF03466 LysR substrate binding domain VAPA_1c10960 PF00171 Aldehyde dehydrogenase family VAPA_1c10970 PF13407 Periplasmic binding protein domain VAPA_1c10980 PF13407 Periplasmic binding protein domain VAPA_1c10990 PF00005 ABC transporter VAPA_1c11000 PF02653 Branched-chain amino acid transport system / permease component VAPA_1c11010 PF00005 ABC transporter VAPA_1c11020 PF02653 Branched-chain amino acid transport system / permease component VAPA_1c11030 PF02653 Branched-chain amino acid transport system / permease component VAPA_1c11040 PF00920 Dehydratase family VAPA_1c11050 PF00701 Dihydrodipicolinate synthetase family VAPA_1c11060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c11060 PF03466 LysR substrate binding domain VAPA_1c11130 PF00664 ABC transporter transmembrane region VAPA_1c11130 PF00005 ABC transporter VAPA_1c11150 PF01757 Acyltransferase family VAPA_1c11160 PF06508 Queuosine biosynthesis protein QueC VAPA_1c11170 PF06472 ABC transporter transmembrane region 2 VAPA_1c11170 PF00005 ABC transporter VAPA_1c11200 PF07690 Major Facilitator Superfamily VAPA_1c11210 PF04185 Phosphoesterase family VAPA_1c11210 PF05506 Domain of unknown function (DUF756) VAPA_1c11220 PF04185 Phosphoesterase family VAPA_1c11220 PF05506 Domain of unknown function (DUF756) VAPA_1c11250 PF00482 Type II secretion system (T2SS), protein F VAPA_1c11260 PF00437 Type II/IV secretion system protein VAPA_1c11270 PF00263 Bacterial type II and III secretion system protein VAPA_1c11270 PF03958 Bacterial type II/III secretion system short domain VAPA_1c11320 PF07963 Prokaryotic N-terminal methylation motif VAPA_1c11320 PF11612 Type II secretion system (T2SS), protein J VAPA_1c11330 PF07963 Prokaryotic N-terminal methylation motif VAPA_1c11330 PF02501 Type II secretion system (T2SS), protein I VAPA_1c11350 PF07963 Prokaryotic N-terminal methylation motif VAPA_1c11350 PF08334 Type II secretion system (T2SS), protein G VAPA_1c11370 PF00291 Pyridoxal-phosphate dependent enzyme VAPA_1c11370 PF00585 C-terminal regulatory domain of Threonine dehydratase VAPA_1c11400 PF02566 OsmC-like protein VAPA_1c11410 PF03232 Ubiquinone biosynthesis protein COQ7 VAPA_1c11420 PF13609 Gram-negative porin VAPA_1c11430 PF00528 Binding-protein-dependent transport system inner membrane component VAPA_1c11450 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VAPA_1c11460 PF12911 N-terminal TM domain of oligopeptide transport permease C VAPA_1c11460 PF00528 Binding-protein-dependent transport system inner membrane component VAPA_1c11470 PF00005 ABC transporter VAPA_1c11470 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VAPA_1c11480 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VAPA_1c11480 PF00005 ABC transporter VAPA_1c11500 PF13006 Insertion element 4 transposase N-terminal VAPA_1c11500 PF01609 Transposase DDE domain VAPA_1c11510 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase VAPA_1c11520 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain VAPA_1c11520 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain VAPA_1c11540 PF00528 Binding-protein-dependent transport system inner membrane component VAPA_1c11550 PF00005 ABC transporter VAPA_1c11550 PF08402 TOBE domain VAPA_1c11580 PF00923 Transaldolase/Fructose-6-phosphate aldolase VAPA_1c11590 PF00342 Phosphoglucose isomerase VAPA_1c11610 PF04166 Pyridoxal phosphate biosynthetic protein PdxA VAPA_1c11620 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_1c11630 PF03466 LysR substrate binding domain VAPA_1c11630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c11650 PF00528 Binding-protein-dependent transport system inner membrane component VAPA_1c11660 PF00528 Binding-protein-dependent transport system inner membrane component VAPA_1c11670 PF00005 ABC transporter VAPA_1c11670 PF17912 MalK OB fold domain VAPA_1c11670 PF03459 TOBE domain VAPA_1c11680 PF01232 Mannitol dehydrogenase Rossmann domain VAPA_1c11680 PF08125 Mannitol dehydrogenase C-terminal domain VAPA_1c11700 PF00923 Transaldolase/Fructose-6-phosphate aldolase VAPA_1c11710 PF00294 pfkB family carbohydrate kinase VAPA_1c11720 PF12833 Helix-turn-helix domain VAPA_1c11720 PF00072 Response regulator receiver domain VAPA_1c11730 PF00370 FGGY family of carbohydrate kinases, N-terminal domain VAPA_1c11730 PF02782 FGGY family of carbohydrate kinases, C-terminal domain VAPA_1c11740 PF00118 TCP-1/cpn60 chaperonin family VAPA_1c11750 PF00166 Chaperonin 10 Kd subunit VAPA_1c11760 PF13091 PLD-like domain VAPA_1c11770 PF00593 TonB dependent receptor VAPA_1c11770 PF07715 TonB-dependent Receptor Plug Domain VAPA_1c11800 PF07715 TonB-dependent Receptor Plug Domain VAPA_1c11800 PF00593 TonB dependent receptor VAPA_1c11810 PF01266 FAD dependent oxidoreductase VAPA_1c11830 PF00528 Binding-protein-dependent transport system inner membrane component VAPA_1c11840 PF00497 Bacterial extracellular solute-binding proteins, family 3 VAPA_1c11860 PF00438 S-adenosylmethionine synthetase, N-terminal domain VAPA_1c11860 PF02773 S-adenosylmethionine synthetase, C-terminal domain VAPA_1c11860 PF02772 S-adenosylmethionine synthetase, central domain VAPA_1c11880 PF03279 Bacterial lipid A biosynthesis acyltransferase VAPA_1c11890 PF00561 alpha/beta hydrolase fold VAPA_1c11900 PF01926 50S ribosome-binding GTPase VAPA_1c11910 PF00034 Cytochrome c VAPA_1c11920 PF05140 ResB-like family VAPA_1c11930 PF01578 Cytochrome C assembly protein VAPA_1c11940 PF00174 Oxidoreductase molybdopterin binding domain VAPA_1c11950 PF01794 Ferric reductase like transmembrane component VAPA_1c11960 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain VAPA_1c11960 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain VAPA_1c11970 PF01491 Frataxin-like domain VAPA_1c11980 PF00912 Transglycosylase VAPA_1c11980 PF17092 Penicillin-binding protein OB-like domain VAPA_1c11980 PF00905 Penicillin binding protein transpeptidase domain VAPA_1c12030 PF03958 Bacterial type II/III secretion system short domain VAPA_1c12030 PF07660 Secretin and TonB N terminus short domain VAPA_1c12030 PF11741 AMIN domain VAPA_1c12030 PF00263 Bacterial type II and III secretion system protein VAPA_1c12040 PF01202 Shikimate kinase VAPA_1c12050 PF01761 3-dehydroquinate synthase VAPA_1c12060 PF01966 HD domain VAPA_1c12060 PF13286 Phosphohydrolase-associated domain VAPA_1c12110 PF04898 Glutamate synthase central domain VAPA_1c12110 PF01645 Conserved region in glutamate synthase VAPA_1c12110 PF01493 GXGXG motif VAPA_1c12110 PF00310 Glutamine amidotransferases class-II VAPA_1c12120 PF07992 Pyridine nucleotide-disulphide oxidoreductase VAPA_1c12120 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster VAPA_1c12130 PF00005 ABC transporter VAPA_1c12140 PF02405 Permease MlaE VAPA_1c12150 PF02470 MlaD protein VAPA_1c12160 PF04333 MlaA lipoprotein VAPA_1c12190 PF00005 ABC transporter VAPA_1c12200 PF01061 ABC-2 type transporter VAPA_1c12210 PF01722 BolA-like protein VAPA_1c12220 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) VAPA_1c12230 PF01634 ATP phosphoribosyltransferase VAPA_1c12240 PF00815 Histidinol dehydrogenase VAPA_1c12260 PF00155 Aminotransferase class I and II VAPA_1c12270 PF00475 Imidazoleglycerol-phosphate dehydratase VAPA_1c12280 PF00117 Glutamine amidotransferase class-I VAPA_1c12290 PF00977 Histidine biosynthesis protein VAPA_1c12300 PF17755 UvrA DNA-binding domain VAPA_1c12300 PF00005 ABC transporter VAPA_1c12300 PF17760 UvrA interaction domain VAPA_1c12310 PF00497 Bacterial extracellular solute-binding proteins, family 3 VAPA_1c12320 PF00375 Sodium:dicarboxylate symporter family VAPA_1c12340 PF00977 Histidine biosynthesis protein VAPA_1c12350 PF01502 Phosphoribosyl-AMP cyclohydrolase VAPA_1c12360 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase VAPA_1c12380 PF01230 HIT domain VAPA_1c12390 PF02416 mttA/Hcf106 family VAPA_1c12400 PF02416 mttA/Hcf106 family VAPA_1c12410 PF00902 Sec-independent protein translocase protein (TatC) VAPA_1c12420 PF17820 PDZ domain VAPA_1c12420 PF13180 PDZ domain VAPA_1c12430 PF08946 Osmosensory transporter coiled coil VAPA_1c12430 PF00083 Sugar (and other) transporter VAPA_1c12440 PF01784 NIF3 (NGG1p interacting factor 3) VAPA_1c12450 PF04166 Pyridoxal phosphate biosynthetic protein PdxA VAPA_1c12460 PF01741 Large-conductance mechanosensitive channel, MscL VAPA_1c12480 PF02563 Polysaccharide biosynthesis/export protein VAPA_1c12480 PF10531 SLBB domain VAPA_1c12490 PF01451 Low molecular weight phosphotyrosine protein phosphatase VAPA_1c12500 PF02706 Chain length determinant protein VAPA_1c12500 PF13807 G-rich domain on putative tyrosine kinase VAPA_1c12500 PF13614 AAA domain VAPA_1c12510 PF02397 Bacterial sugar transferase VAPA_1c12530 PF00534 Glycosyl transferases group 1 VAPA_1c12530 PF13439 Glycosyltransferase Family 4 VAPA_1c12560 PF06082 Exopolysaccharide biosynthesis protein YbjH VAPA_1c12590 PF00355 Rieske [2Fe-2S] domain VAPA_1c12590 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal VAPA_1c12600 PF00033 Cytochrome b/b6/petB VAPA_1c12600 PF00032 Cytochrome b(C-terminal)/b6/petD VAPA_1c12610 PF02167 Cytochrome C1 family VAPA_1c12620 PF02798 Glutathione S-transferase, N-terminal domain VAPA_1c12620 PF00043 Glutathione S-transferase, C-terminal domain VAPA_1c12630 PF04386 Stringent starvation protein B VAPA_1c12680 PF01368 DHH family VAPA_1c12680 PF17768 RecJ OB domain VAPA_1c12680 PF02272 DHHA1 domain VAPA_1c12700 PF02687 FtsX-like permease family VAPA_1c12700 PF12704 MacB-like periplasmic core domain VAPA_1c12710 PF00005 ABC transporter VAPA_1c12720 PF00574 Clp protease VAPA_1c12730 PF01042 Endoribonuclease L-PSP VAPA_1c12740 PF12793 Sugar transport-related sRNA regulator N-term VAPA_1c12740 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VAPA_1c12750 PF00528 Binding-protein-dependent transport system inner membrane component VAPA_1c12760 PF12911 N-terminal TM domain of oligopeptide transport permease C VAPA_1c12760 PF00528 Binding-protein-dependent transport system inner membrane component VAPA_1c12770 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VAPA_1c12770 PF00005 ABC transporter VAPA_1c12780 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VAPA_1c12780 PF00005 ABC transporter VAPA_1c12800 PF01418 Helix-turn-helix domain, rpiR family VAPA_1c12800 PF01380 SIS domain VAPA_1c12810 PF07969 Amidohydrolase family VAPA_1c12820 PF00171 Aldehyde dehydrogenase family VAPA_1c12850 PF01613 Flavin reductase like domain VAPA_1c12870 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase VAPA_1c12880 PF00535 Glycosyl transferase family 2 VAPA_1c12890 PF01569 PAP2 superfamily VAPA_1c12920 PF01575 MaoC like domain VAPA_1c12920 PF00171 Aldehyde dehydrogenase family VAPA_1c12930 PF00005 ABC transporter VAPA_1c12940 PF00005 ABC transporter VAPA_1c12970 PF00175 Oxidoreductase NAD-binding domain VAPA_1c12970 PF00111 2Fe-2S iron-sulfur cluster binding domain VAPA_1c12970 PF00970 Oxidoreductase FAD-binding domain VAPA_1c12980 PF01883 Iron-sulfur cluster assembly protein VAPA_1c12990 PF05138 Phenylacetic acid catabolic protein VAPA_1c13000 PF06243 Phenylacetic acid degradation B VAPA_1c13010 PF05138 Phenylacetic acid catabolic protein VAPA_1c13030 PF03061 Thioesterase superfamily VAPA_1c13040 PF00378 Enoyl-CoA hydratase/isomerase VAPA_1c13050 PF00132 Bacterial transferase hexapeptide (six repeats) VAPA_1c13060 PF00440 Bacterial regulatory proteins, tetR family VAPA_1c13070 PF13519 von Willebrand factor type A domain VAPA_1c13070 PF07584 Aerotolerance regulator N-terminal VAPA_1c13080 PF01882 Protein of unknown function DUF58 VAPA_1c13090 PF07726 ATPase family associated with various cellular activities (AAA) VAPA_1c13090 PF17863 AAA lid domain VAPA_1c13100 PF00595 PDZ domain VAPA_1c13110 PF01026 TatD related DNase VAPA_1c13150 PF00437 Type II/IV secretion system protein VAPA_1c13150 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain VAPA_1c13170 PF01970 Tripartite tricarboxylate transporter TctA family VAPA_1c13180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c13180 PF03466 LysR substrate binding domain VAPA_1c13190 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_1c13220 PF00106 short chain dehydrogenase VAPA_1c13240 PF00107 Zinc-binding dehydrogenase VAPA_1c13240 PF08240 Alcohol dehydrogenase GroES-like domain VAPA_1c13260 PF02690 Na+/Pi-cotransporter VAPA_1c13270 PF00149 Calcineurin-like phosphoesterase VAPA_1c13280 PF03459 TOBE domain VAPA_1c13280 PF00005 ABC transporter VAPA_1c13290 PF00528 Binding-protein-dependent transport system inner membrane component VAPA_1c13300 PF00528 Binding-protein-dependent transport system inner membrane component VAPA_1c13330 PF00356 Bacterial regulatory proteins, lacI family VAPA_1c13340 PF01252 Signal peptidase (SPase) II VAPA_1c13350 PF08264 Anticodon-binding domain of tRNA VAPA_1c13350 PF00133 tRNA synthetases class I (I, L, M and V) VAPA_1c13350 PF06827 Zinc finger found in FPG and IleRS VAPA_1c13360 PF06574 FAD synthetase VAPA_1c13360 PF01687 Riboflavin kinase VAPA_1c13380 PF00378 Enoyl-CoA hydratase/isomerase VAPA_1c13400 PF02770 Acyl-CoA dehydrogenase, middle domain VAPA_1c13400 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VAPA_1c13400 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VAPA_1c13410 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VAPA_1c13410 PF02770 Acyl-CoA dehydrogenase, middle domain VAPA_1c13410 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VAPA_1c13420 PF00551 Formyl transferase VAPA_1c13460 PF01189 16S rRNA methyltransferase RsmB/F VAPA_1c13460 PF01029 NusB family VAPA_1c13480 PF00471 Ribosomal protein L33 VAPA_1c13490 PF00830 Ribosomal L28 family VAPA_1c13500 PF07992 Pyridine nucleotide-disulphide oxidoreductase VAPA_1c13510 PF13545 Crp-like helix-turn-helix domain VAPA_1c13510 PF00027 Cyclic nucleotide-binding domain VAPA_1c13520 PF17854 FtsK alpha domain VAPA_1c13520 PF09397 Ftsk gamma domain VAPA_1c13520 PF01580 FtsK/SpoIIIE family VAPA_1c13520 PF13491 4TM region of DNA translocase FtsK/SpoIIIE VAPA_1c13530 PF03548 Outer membrane lipoprotein carrier protein LolA VAPA_1c13540 PF16193 AAA C-terminal domain VAPA_1c13540 PF00004 ATPase family associated with various cellular activities (AAA) VAPA_1c13540 PF12002 MgsA AAA+ ATPase C terminal VAPA_1c13550 PF02653 Branched-chain amino acid transport system / permease component VAPA_1c13560 PF11862 Domain of unknown function (DUF3382) VAPA_1c13560 PF02653 Branched-chain amino acid transport system / permease component VAPA_1c13570 PF12399 Branched-chain amino acid ATP-binding cassette transporter VAPA_1c13570 PF00005 ABC transporter VAPA_1c13580 PF00005 ABC transporter VAPA_1c13590 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_1c13600 PF00970 Oxidoreductase FAD-binding domain VAPA_1c13600 PF00175 Oxidoreductase NAD-binding domain VAPA_1c13600 PF00111 2Fe-2S iron-sulfur cluster binding domain VAPA_1c13690 PF00291 Pyridoxal-phosphate dependent enzyme VAPA_1c13700 PF09297 NADH pyrophosphatase zinc ribbon domain VAPA_1c13700 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain VAPA_1c13700 PF00293 NUDIX domain VAPA_1c13710 PF01206 Sulfurtransferase TusA VAPA_1c13720 PF00483 Nucleotidyl transferase VAPA_1c13740 PF03883 Peroxide stress protein YaaA VAPA_1c13760 PF08386 TAP-like protein VAPA_1c13760 PF00561 alpha/beta hydrolase fold VAPA_1c13770 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term VAPA_1c13770 PF14489 QueF-like protein VAPA_1c13780 PF00106 short chain dehydrogenase VAPA_1c13800 PF03466 LysR substrate binding domain VAPA_1c13800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c13810 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain VAPA_1c13810 PF13378 Enolase C-terminal domain-like VAPA_1c13820 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_1c13830 PF17645 Arylmalonate decarboxylase VAPA_1c13840 PF03972 MmgE/PrpD family VAPA_1c13850 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VAPA_1c13850 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VAPA_1c13850 PF02770 Acyl-CoA dehydrogenase, middle domain VAPA_1c13870 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VAPA_1c13870 PF02770 Acyl-CoA dehydrogenase, middle domain VAPA_1c13870 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VAPA_1c13880 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_1c13890 PF13193 AMP-binding enzyme C-terminal domain VAPA_1c13890 PF00501 AMP-binding enzyme VAPA_1c13950 PF11798 IMS family HHH motif VAPA_1c13950 PF00817 impB/mucB/samB family VAPA_1c13950 PF11799 impB/mucB/samB family C-terminal domain VAPA_1c14000 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_1c14010 PF03466 LysR substrate binding domain VAPA_1c14010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c14020 PF07519 Tannase and feruloyl esterase VAPA_1c14040 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_1c14050 PF00083 Sugar (and other) transporter VAPA_1c14060 PF01070 FMN-dependent dehydrogenase VAPA_1c14070 PF03466 LysR substrate binding domain VAPA_1c14070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c14100 PF07730 Histidine kinase VAPA_1c14100 PF17200 Single Cache domain 2 VAPA_1c14110 PF00196 Bacterial regulatory proteins, luxR family VAPA_1c14110 PF00072 Response regulator receiver domain VAPA_1c14130 PF00528 Binding-protein-dependent transport system inner membrane component VAPA_1c14140 PF00005 ABC transporter VAPA_1c14150 PF02560 Cyanate lyase C-terminal domain VAPA_1c14160 PF00106 short chain dehydrogenase VAPA_1c14170 PF00392 Bacterial regulatory proteins, gntR family VAPA_1c14170 PF00155 Aminotransferase class I and II VAPA_1c14180 PF00155 Aminotransferase class I and II VAPA_1c14210 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VAPA_1c14220 PF00528 Binding-protein-dependent transport system inner membrane component VAPA_1c14230 PF12911 N-terminal TM domain of oligopeptide transport permease C VAPA_1c14230 PF00528 Binding-protein-dependent transport system inner membrane component VAPA_1c14240 PF00005 ABC transporter VAPA_1c14240 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VAPA_1c14260 PF07687 Peptidase dimerisation domain VAPA_1c14260 PF01546 Peptidase family M20/M25/M40 VAPA_1c14270 PF07690 Major Facilitator Superfamily VAPA_1c14280 PF07729 FCD domain VAPA_1c14280 PF00392 Bacterial regulatory proteins, gntR family VAPA_1c14310 PF01810 LysE type translocator VAPA_1c14350 PF00581 Rhodanese-like domain VAPA_1c14390 PF02386 Cation transport protein VAPA_1c14400 PF02080 TrkA-C domain VAPA_1c14400 PF02254 TrkA-N domain VAPA_1c14420 PF01661 Macro domain VAPA_1c14480 PF04542 Sigma-70 region 2 VAPA_1c14480 PF04545 Sigma-70, region 4 VAPA_1c14530 PF00206 Lyase VAPA_1c14530 PF14698 Argininosuccinate lyase C-terminal VAPA_1c14540 PF07694 5TMR of 5TMR-LYT VAPA_1c14540 PF06580 Histidine kinase VAPA_1c14550 PF00072 Response regulator receiver domain VAPA_1c14550 PF04397 LytTr DNA-binding domain VAPA_1c14560 PF01594 AI-2E family transporter VAPA_1c14610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c14610 PF03466 LysR substrate binding domain VAPA_1c14620 PF07690 Major Facilitator Superfamily VAPA_1c14640 PF10091 Putative glucoamylase VAPA_1c14640 PF06165 Glycosyltransferase family 36 VAPA_1c14640 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain VAPA_1c14660 PF00311 Phosphoenolpyruvate carboxylase VAPA_1c14670 PF03900 Porphobilinogen deaminase, C-terminal domain VAPA_1c14670 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain VAPA_1c14710 PF00575 S1 RNA binding domain VAPA_1c14710 PF10150 Ribonuclease E/G family VAPA_1c14710 PF12111 Polyribonucleotide phosphorylase C terminal VAPA_1c14720 PF01479 S4 domain VAPA_1c14720 PF00849 RNA pseudouridylate synthase VAPA_1c14750 PF06965 Na+/H+ antiporter 1 VAPA_1c14750 PF01343 Peptidase family S49 VAPA_1c14760 PF07690 Major Facilitator Superfamily VAPA_1c14770 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases VAPA_1c14780 PF02545 Maf-like protein VAPA_1c14790 PF02620 Large ribosomal RNA subunit accumulation protein YceD VAPA_1c14800 PF01783 Ribosomal L32p protein family VAPA_1c14810 PF02504 Fatty acid synthesis protein VAPA_1c14820 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III VAPA_1c14820 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal VAPA_1c14830 PF00698 Acyl transferase domain VAPA_1c14850 PF00550 Phosphopantetheine attachment site VAPA_1c14860 PF00109 Beta-ketoacyl synthase, N-terminal domain VAPA_1c14860 PF02801 Beta-ketoacyl synthase, C-terminal domain VAPA_1c14880 PF08281 Sigma-70, region 4 VAPA_1c14880 PF04542 Sigma-70 region 2 VAPA_1c14910 PF13180 PDZ domain VAPA_1c14910 PF17820 PDZ domain VAPA_1c14920 PF00009 Elongation factor Tu GTP binding domain VAPA_1c14920 PF00679 Elongation factor G C-terminus VAPA_1c14920 PF03144 Elongation factor Tu domain 2 VAPA_1c14920 PF06421 GTP-binding protein LepA C-terminus VAPA_1c14930 PF10502 Signal peptidase, peptidase S26 VAPA_1c14950 PF14622 Ribonuclease-III-like VAPA_1c14950 PF00035 Double-stranded RNA binding motif VAPA_1c14960 PF07650 KH domain VAPA_1c14960 PF01926 50S ribosome-binding GTPase VAPA_1c14970 PF02565 Recombination protein O C terminal VAPA_1c14970 PF11967 Recombination protein O N terminal VAPA_1c14980 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ VAPA_1c14990 PF01648 4'-phosphopantetheinyl transferase superfamily VAPA_1c15000 PF00933 Glycosyl hydrolase family 3 N terminal domain VAPA_1c15010 PF01863 Protein of unknown function DUF45 VAPA_1c15020 PF00012 Hsp70 protein VAPA_1c15030 PF01336 OB-fold nucleic acid binding domain VAPA_1c15030 PF00152 tRNA synthetases class II (D, K and N) VAPA_1c15050 PF02325 YGGT family VAPA_1c15060 PF01039 Carboxyl transferase domain VAPA_1c15060 PF17848 Acetyl-coA carboxylase zinc finger domain VAPA_1c15070 PF00290 Tryptophan synthase alpha chain VAPA_1c15080 PF00291 Pyridoxal-phosphate dependent enzyme VAPA_1c15090 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase VAPA_1c15100 PF01416 tRNA pseudouridine synthase VAPA_1c15120 PF02774 Semialdehyde dehydrogenase, dimerisation domain VAPA_1c15120 PF01118 Semialdehyde dehydrogenase, NAD binding domain VAPA_1c15130 PF00180 Isocitrate/isopropylmalate dehydrogenase VAPA_1c15140 PF00694 Aconitase C-terminal domain VAPA_1c15150 PF00330 Aconitase family (aconitate hydratase) VAPA_1c15160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c15160 PF03466 LysR substrate binding domain VAPA_1c15180 PF00285 Citrate synthase, C-terminal domain VAPA_1c15190 PF03937 Flavinator of succinate dehydrogenase VAPA_1c15200 PF13085 2Fe-2S iron-sulfur cluster binding domain VAPA_1c15210 PF00890 FAD binding domain VAPA_1c15210 PF02910 Fumarate reductase flavoprotein C-term VAPA_1c15240 PF00392 Bacterial regulatory proteins, gntR family VAPA_1c15240 PF07702 UTRA domain VAPA_1c15250 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain VAPA_1c15250 PF00056 lactate/malate dehydrogenase, NAD binding domain VAPA_1c15290 PF00330 Aconitase family (aconitate hydratase) VAPA_1c15290 PF06434 Aconitate hydratase 2 N-terminus VAPA_1c15290 PF11791 Aconitate B N-terminal domain VAPA_1c15300 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VAPA_1c15300 PF02770 Acyl-CoA dehydrogenase, middle domain VAPA_1c15300 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VAPA_1c15300 PF09317 Domain of unknown function (DUF1974) VAPA_1c15330 PF00330 Aconitase family (aconitate hydratase) VAPA_1c15330 PF00694 Aconitase C-terminal domain VAPA_1c15360 PF02421 Ferrous iron transport protein B VAPA_1c15360 PF07664 Ferrous iron transport protein B C terminus VAPA_1c15360 PF07670 Nucleoside recognition VAPA_1c15380 PF01494 FAD binding domain VAPA_1c15400 PF03301 Tryptophan 2,3-dioxygenase VAPA_1c15410 PF00266 Aminotransferase class-V VAPA_1c15420 PF04199 Putative cyclase VAPA_1c15440 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain VAPA_1c15440 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain VAPA_1c15450 PF00202 Aminotransferase class-III VAPA_1c15470 PF01649 Ribosomal protein S20 VAPA_1c15480 PF03023 Lipid II flippase MurJ VAPA_1c15490 PF13369 Transglutaminase-like superfamily VAPA_1c15510 PF03795 YCII-related domain VAPA_1c15520 PF03795 YCII-related domain VAPA_1c15530 PF04542 Sigma-70 region 2 VAPA_1c15530 PF08281 Sigma-70, region 4 VAPA_1c15540 PF02311 AraC-like ligand binding domain VAPA_1c15540 PF12833 Helix-turn-helix domain VAPA_1c15570 PF00586 AIR synthase related protein, N-terminal domain VAPA_1c15570 PF02769 AIR synthase related protein, C-terminal domain VAPA_1c15580 PF00308 Bacterial dnaA protein VAPA_1c15590 PF01743 Poly A polymerase head domain VAPA_1c15590 PF12626 Polymerase A arginine-rich C-terminus VAPA_1c15590 PF12627 Probable RNA and SrmB- binding site of polymerase A VAPA_1c15600 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) VAPA_1c15610 PF01865 Protein of unknown function DUF47 VAPA_1c15620 PF01384 Phosphate transporter family VAPA_1c15650 PF00886 Ribosomal protein S16 VAPA_1c15660 PF05239 PRC-barrel domain VAPA_1c15660 PF01782 RimM N-terminal domain VAPA_1c15670 PF01746 tRNA (Guanine-1)-methyltransferase VAPA_1c15680 PF01245 Ribosomal protein L19 VAPA_1c15690 PF00293 NUDIX domain VAPA_1c15700 PF03186 CobD/Cbib protein VAPA_1c15700 PF17113 Regulatory signalling modulator protein AmpE VAPA_1c15710 PF00155 Aminotransferase class I and II VAPA_1c15720 PF03193 RsgA GTPase VAPA_1c15730 PF01329 Pterin 4 alpha carbinolamine dehydratase VAPA_1c15740 PF01435 Peptidase family M48 VAPA_1c15750 PF00929 Exonuclease VAPA_1c15760 PF00270 DEAD/DEAH box helicase VAPA_1c15760 PF00271 Helicase conserved C-terminal domain VAPA_1c15770 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus VAPA_1c15770 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus VAPA_1c15780 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain VAPA_1c15780 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain VAPA_1c15780 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain VAPA_1c15790 PF00561 alpha/beta hydrolase fold VAPA_1c15800 PF00107 Zinc-binding dehydrogenase VAPA_1c15800 PF08240 Alcohol dehydrogenase GroES-like domain VAPA_1c15840 PF00175 Oxidoreductase NAD-binding domain VAPA_1c15840 PF00111 2Fe-2S iron-sulfur cluster binding domain VAPA_1c15850 PF00355 Rieske [2Fe-2S] domain VAPA_1c15850 PF00848 Ring hydroxylating alpha subunit (catalytic domain) VAPA_1c15870 PF00501 AMP-binding enzyme VAPA_1c15870 PF13193 AMP-binding enzyme C-terminal domain VAPA_1c15900 PF04199 Putative cyclase VAPA_1c15920 PF13458 Periplasmic binding protein VAPA_1c15930 PF13458 Periplasmic binding protein VAPA_1c15940 PF00355 Rieske [2Fe-2S] domain VAPA_1c15940 PF00848 Ring hydroxylating alpha subunit (catalytic domain) VAPA_1c15950 PF00866 Ring hydroxylating beta subunit VAPA_1c15970 PF02653 Branched-chain amino acid transport system / permease component VAPA_1c15980 PF00005 ABC transporter VAPA_1c15980 PF12399 Branched-chain amino acid ATP-binding cassette transporter VAPA_1c15990 PF00005 ABC transporter VAPA_1c16000 PF00501 AMP-binding enzyme VAPA_1c16000 PF13193 AMP-binding enzyme C-terminal domain VAPA_1c16020 PF00106 short chain dehydrogenase VAPA_1c16090 PF00106 short chain dehydrogenase VAPA_1c16150 PF04972 BON domain VAPA_1c16150 PF13629 Pilus formation protein N terminal region VAPA_1c16150 PF00263 Bacterial type II and III secretion system protein VAPA_1c16230 PF00437 Type II/IV secretion system protein VAPA_1c16260 PF00196 Bacterial regulatory proteins, luxR family VAPA_1c16260 PF00072 Response regulator receiver domain VAPA_1c16290 PF07859 alpha/beta hydrolase fold VAPA_1c16300 PF00478 IMP dehydrogenase / GMP reductase domain VAPA_1c16310 PF03922 OmpW family VAPA_1c16320 PF00127 Copper binding proteins, plastocyanin/azurin family VAPA_1c16330 PF13361 UvrD-like helicase C-terminal domain VAPA_1c16330 PF00580 UvrD/REP helicase N-terminal domain VAPA_1c16350 PF01636 Phosphotransferase enzyme family VAPA_1c16370 PF00476 DNA polymerase family A VAPA_1c16370 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain VAPA_1c16370 PF01612 3'-5' exonuclease VAPA_1c16370 PF01367 5'-3' exonuclease, C-terminal SAM fold VAPA_1c16380 PF07687 Peptidase dimerisation domain VAPA_1c16380 PF01546 Peptidase family M20/M25/M40 VAPA_1c16390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c16390 PF03466 LysR substrate binding domain VAPA_1c16400 PF01266 FAD dependent oxidoreductase VAPA_1c16410 PF00497 Bacterial extracellular solute-binding proteins, family 3 VAPA_1c16430 PF01738 Dienelactone hydrolase family VAPA_1c16460 PF07969 Amidohydrolase family VAPA_1c16470 PF00005 ABC transporter VAPA_1c16470 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VAPA_1c16480 PF00005 ABC transporter VAPA_1c16480 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VAPA_1c16490 PF00528 Binding-protein-dependent transport system inner membrane component VAPA_1c16500 PF00528 Binding-protein-dependent transport system inner membrane component VAPA_1c16510 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VAPA_1c16520 PF07171 MlrC C-terminus VAPA_1c16520 PF07364 Metallopeptidase family M81 VAPA_1c16530 PF01266 FAD dependent oxidoreductase VAPA_1c16540 PF01381 Helix-turn-helix VAPA_1c16540 PF07883 Cupin domain VAPA_1c16560 PF11737 Protein of unknown function (DUF3300) VAPA_1c16590 PF00005 ABC transporter VAPA_1c16610 PF00581 Rhodanese-like domain VAPA_1c16640 PF02609 Exonuclease VII small subunit VAPA_1c16650 PF00348 Polyprenyl synthetase VAPA_1c16660 PF02780 Transketolase, C-terminal domain VAPA_1c16660 PF13292 1-deoxy-D-xylulose-5-phosphate synthase VAPA_1c16660 PF02779 Transketolase, pyrimidine binding domain VAPA_1c16670 PF03480 Bacterial extracellular solute-binding protein, family 7 VAPA_1c16680 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VAPA_1c16700 PF03781 Sulfatase-modifying factor enzyme 1 VAPA_1c16700 PF12867 DinB superfamily VAPA_1c16710 PF07690 Major Facilitator Superfamily VAPA_1c16720 PF12727 PBP superfamily domain VAPA_1c16720 PF12728 Helix-turn-helix domain VAPA_1c16730 PF00202 Aminotransferase class-III VAPA_1c16740 PF03466 LysR substrate binding domain VAPA_1c16740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c16750 PF07702 UTRA domain VAPA_1c16750 PF00392 Bacterial regulatory proteins, gntR family VAPA_1c16770 PF02653 Branched-chain amino acid transport system / permease component VAPA_1c16790 PF00005 ABC transporter VAPA_1c16790 PF12399 Branched-chain amino acid ATP-binding cassette transporter VAPA_1c16800 PF00005 ABC transporter VAPA_1c16810 PF07687 Peptidase dimerisation domain VAPA_1c16810 PF01546 Peptidase family M20/M25/M40 VAPA_1c16820 PF07364 Metallopeptidase family M81 VAPA_1c16820 PF07171 MlrC C-terminus VAPA_1c16830 PF00528 Binding-protein-dependent transport system inner membrane component VAPA_1c16840 PF00005 ABC transporter VAPA_1c16850 PF12849 PBP superfamily domain VAPA_1c16880 PF01799 [2Fe-2S] binding domain VAPA_1c16880 PF00111 2Fe-2S iron-sulfur cluster binding domain VAPA_1c16890 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase VAPA_1c16890 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain VAPA_1c16900 PF03450 CO dehydrogenase flavoprotein C-terminal domain VAPA_1c16900 PF00941 FAD binding domain in molybdopterin dehydrogenase VAPA_1c16940 PF02625 XdhC and CoxI family VAPA_1c16940 PF13478 XdhC Rossmann domain VAPA_1c16950 PF03334 Na+/H+ antiporter subunit VAPA_1c16960 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) VAPA_1c16980 PF00361 Proton-conducting membrane transporter VAPA_1c16990 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L VAPA_1c17000 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter VAPA_1c17000 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus VAPA_1c17000 PF13244 Domain of unknown function (DUF4040) VAPA_1c17000 PF00361 Proton-conducting membrane transporter VAPA_1c17010 PF02537 CrcB-like protein, Camphor Resistance (CrcB) VAPA_1c17020 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VAPA_1c17060 PF18073 Rubredoxin metal binding domain VAPA_1c17080 PF00216 Bacterial DNA-binding protein VAPA_1c17090 PF00575 S1 RNA binding domain VAPA_1c17110 PF02153 Prephenate dehydrogenase VAPA_1c17120 PF00800 Prephenate dehydratase VAPA_1c17120 PF01842 ACT domain VAPA_1c17120 PF01817 Chorismate mutase type II VAPA_1c17130 PF00266 Aminotransferase class-V VAPA_1c17150 PF03989 DNA gyrase C-terminal domain, beta-propeller VAPA_1c17150 PF00521 DNA gyrase/topoisomerase IV, subunit A VAPA_1c17160 PF00691 OmpA family VAPA_1c17180 PF13419 Haloacid dehalogenase-like hydrolase VAPA_1c17230 PF00959 Phage lysozyme VAPA_1c17290 PF05016 ParE toxin of type II toxin-antitoxin system, parDE VAPA_1c17300 PF13847 Methyltransferase domain VAPA_1c17300 PF10119 Predicted methyltransferase regulatory domain VAPA_1c17320 PF01479 S4 domain VAPA_1c17320 PF00849 RNA pseudouridylate synthase VAPA_1c17370 PF00994 Probable molybdopterin binding domain VAPA_1c17370 PF18146 Damage-inducible protein CinA KH domain VAPA_1c17370 PF02464 Competence-damaged protein VAPA_1c17400 PF00989 PAS fold VAPA_1c17400 PF00512 His Kinase A (phospho-acceptor) domain VAPA_1c17400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAPA_1c17410 PF02954 Bacterial regulatory protein, Fis family VAPA_1c17410 PF00072 Response regulator receiver domain VAPA_1c17410 PF00158 Sigma-54 interaction domain VAPA_1c17430 PF03372 Endonuclease/Exonuclease/phosphatase family VAPA_1c17470 PF06745 KaiC VAPA_1c17480 PF00512 His Kinase A (phospho-acceptor) domain VAPA_1c17480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAPA_1c17480 PF02702 Osmosensitive K+ channel His kinase sensor domain VAPA_1c17480 PF13493 Domain of unknown function (DUF4118) VAPA_1c17490 PF03706 Lysylphosphatidylglycerol synthase TM region VAPA_1c17500 PF04679 ATP dependent DNA ligase C terminal region VAPA_1c17500 PF01068 ATP dependent DNA ligase domain VAPA_1c17500 PF13298 DNA polymerase Ligase (LigD) VAPA_1c17520 PF00186 Dihydrofolate reductase VAPA_1c17530 PF00303 Thymidylate synthase VAPA_1c17540 PF02979 Nitrile hydratase, alpha chain VAPA_1c17570 PF02913 FAD linked oxidases, C-terminal domain VAPA_1c17570 PF01565 FAD binding domain VAPA_1c17590 PF03631 Virulence factor BrkB VAPA_1c17610 PF00085 Thioredoxin VAPA_1c17630 PF03466 LysR substrate binding domain VAPA_1c17630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c17650 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_1c17660 PF08386 TAP-like protein VAPA_1c17660 PF00561 alpha/beta hydrolase fold VAPA_1c17680 PF01053 Cys/Met metabolism PLP-dependent enzyme VAPA_1c17710 PF00962 Adenosine/AMP deaminase VAPA_1c17720 PF03466 LysR substrate binding domain VAPA_1c17720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c17780 PF08241 Methyltransferase domain VAPA_1c17810 PF04055 Radical SAM superfamily VAPA_1c17830 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase VAPA_1c17830 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain VAPA_1c17850 PF04994 TfoX C-terminal domain VAPA_1c17850 PF04993 TfoX N-terminal domain VAPA_1c17870 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VAPA_1c17890 PF00756 Putative esterase VAPA_1c17900 PF00561 alpha/beta hydrolase fold VAPA_1c17910 PF00107 Zinc-binding dehydrogenase VAPA_1c17910 PF08240 Alcohol dehydrogenase GroES-like domain VAPA_1c17920 PF02798 Glutathione S-transferase, N-terminal domain VAPA_1c17940 PF00355 Rieske [2Fe-2S] domain VAPA_1c17940 PF00111 2Fe-2S iron-sulfur cluster binding domain VAPA_1c17950 PF01220 Dehydroquinase class II VAPA_1c17960 PF04293 SpoVR like protein VAPA_1c17970 PF04285 Protein of unknown function (DUF444) VAPA_1c17980 PF06798 PrkA serine protein kinase C-terminal domain VAPA_1c17980 PF08298 PrkA AAA domain VAPA_1c18000 PF01556 DnaJ C terminal domain VAPA_1c18000 PF00226 DnaJ domain VAPA_1c18000 PF00684 DnaJ central domain VAPA_1c18010 PF00012 Hsp70 protein VAPA_1c18020 PF01025 GrpE VAPA_1c18030 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VAPA_1c18050 PF02666 Phosphatidylserine decarboxylase VAPA_1c18060 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_1c18070 PF10282 Lactonase, 7-bladed beta-propeller VAPA_1c18090 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus VAPA_1c18090 PF08666 SAF domain VAPA_1c18100 PF10282 Lactonase, 7-bladed beta-propeller VAPA_1c18110 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VAPA_1c18130 PF03480 Bacterial extracellular solute-binding protein, family 7 VAPA_1c18140 PF01370 NAD dependent epimerase/dehydratase family VAPA_1c18150 PF07729 FCD domain VAPA_1c18150 PF00392 Bacterial regulatory proteins, gntR family VAPA_1c18160 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_1c18170 PF00701 Dihydrodipicolinate synthetase family VAPA_1c18190 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_1c18200 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain VAPA_1c18200 PF13378 Enolase C-terminal domain-like VAPA_1c18210 PF00171 Aldehyde dehydrogenase family VAPA_1c18220 PF00528 Binding-protein-dependent transport system inner membrane component VAPA_1c18270 PF00005 ABC transporter VAPA_1c18280 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VAPA_1c18290 PF00440 Bacterial regulatory proteins, tetR family VAPA_1c18300 PF13091 PLD-like domain VAPA_1c18300 PF13396 Phospholipase_D-nuclease N-terminal VAPA_1c18320 PF01717 Cobalamin-independent synthase, Catalytic domain VAPA_1c18330 PF07729 FCD domain VAPA_1c18330 PF00392 Bacterial regulatory proteins, gntR family VAPA_1c18340 PF13458 Periplasmic binding protein VAPA_1c18370 PF00005 ABC transporter VAPA_1c18370 PF12399 Branched-chain amino acid ATP-binding cassette transporter VAPA_1c18380 PF00005 ABC transporter VAPA_1c18390 PF07519 Tannase and feruloyl esterase VAPA_1c18420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c18420 PF03466 LysR substrate binding domain VAPA_1c18430 PF00682 HMGL-like VAPA_1c18440 PF02515 CoA-transferase family III VAPA_1c18450 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_1c18460 PF00893 Small Multidrug Resistance protein VAPA_1c18480 PF07690 Major Facilitator Superfamily VAPA_1c18490 PF00140 Sigma-70 factor, region 1.2 VAPA_1c18490 PF04545 Sigma-70, region 4 VAPA_1c18490 PF04546 Sigma-70, non-essential region VAPA_1c18490 PF04542 Sigma-70 region 2 VAPA_1c18490 PF03979 Sigma-70 factor, region 1.1 VAPA_1c18490 PF04539 Sigma-70 region 3 VAPA_1c18500 PF13662 Toprim domain VAPA_1c18500 PF01807 CHC2 zinc finger VAPA_1c18500 PF08278 DNA primase DnaG DnaB-binding VAPA_1c18500 PF10410 DnaB-helicase binding domain of primase VAPA_1c18500 PF08275 DNA primase catalytic core, N-terminal domain VAPA_1c18510 PF03631 Virulence factor BrkB VAPA_1c18520 PF00106 short chain dehydrogenase VAPA_1c18530 PF09361 Phasin protein VAPA_1c18540 PF00850 Histone deacetylase domain VAPA_1c18550 PF03061 Thioesterase superfamily VAPA_1c18570 PF05532 CsbD-like VAPA_1c18580 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain VAPA_1c18580 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family VAPA_1c18600 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VAPA_1c18600 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VAPA_1c18610 PF02646 RmuC family VAPA_1c18640 PF11892 Domain of unknown function (DUF3412) VAPA_1c18640 PF03641 Possible lysine decarboxylase VAPA_1c18640 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases VAPA_1c18650 PF00378 Enoyl-CoA hydratase/isomerase VAPA_1c18660 PF01132 Elongation factor P (EF-P) OB domain VAPA_1c18660 PF08207 Elongation factor P (EF-P) KOW-like domain VAPA_1c18660 PF09285 Elongation factor P, C-terminal VAPA_1c18680 PF08459 UvrC Helix-hairpin-helix N-terminal VAPA_1c18680 PF01541 GIY-YIG catalytic domain VAPA_1c18680 PF02151 UvrB/uvrC motif VAPA_1c18690 PF01066 CDP-alcohol phosphatidyltransferase VAPA_1c18710 PF03466 LysR substrate binding domain VAPA_1c18710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c18720 PF00561 alpha/beta hydrolase fold VAPA_1c18730 PF00180 Isocitrate/isopropylmalate dehydrogenase VAPA_1c18740 PF00216 Bacterial DNA-binding protein VAPA_1c18800 PF01161 Phosphatidylethanolamine-binding protein VAPA_1c18830 PF00109 Beta-ketoacyl synthase, N-terminal domain VAPA_1c18830 PF02801 Beta-ketoacyl synthase, C-terminal domain VAPA_1c18830 PF00107 Zinc-binding dehydrogenase VAPA_1c18830 PF00698 Acyl transferase domain VAPA_1c18830 PF00550 Phosphopantetheine attachment site VAPA_1c18830 PF14765 Polyketide synthase dehydratase VAPA_1c18830 PF16197 Ketoacyl-synthetase C-terminal extension VAPA_1c18830 PF08240 Alcohol dehydrogenase GroES-like domain VAPA_1c18830 PF08659 KR domain VAPA_1c18840 PF01975 Survival protein SurE VAPA_1c18860 PF01551 Peptidase family M23 VAPA_1c18860 PF01476 LysM domain VAPA_1c18870 PF04539 Sigma-70 region 3 VAPA_1c18870 PF04545 Sigma-70, region 4 VAPA_1c18870 PF04542 Sigma-70 region 2 VAPA_1c18870 PF00140 Sigma-70 factor, region 1.2 VAPA_1c18880 PF05958 tRNA (Uracil-5-)-methyltransferase VAPA_1c18890 PF01027 Inhibitor of apoptosis-promoting Bax1 VAPA_1c18900 PF03928 Haem-degrading VAPA_1c18920 PF02472 Biopolymer transport protein ExbD/TolR VAPA_1c18930 PF01618 MotA/TolQ/ExbB proton channel family VAPA_1c18970 PF00210 Ferritin-like domain VAPA_1c18980 PF00578 AhpC/TSA family VAPA_1c18980 PF10417 C-terminal domain of 1-Cys peroxiredoxin VAPA_1c18990 PF13192 Thioredoxin domain VAPA_1c18990 PF07992 Pyridine nucleotide-disulphide oxidoreductase VAPA_1c19000 PF03618 Kinase/pyrophosphorylase VAPA_1c19010 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain VAPA_1c19010 PF02896 PEP-utilising enzyme, TIM barrel domain VAPA_1c19010 PF00391 PEP-utilising enzyme, mobile domain VAPA_1c19030 PF01250 Ribosomal protein S6 VAPA_1c19050 PF01084 Ribosomal protein S18 VAPA_1c19060 PF03948 Ribosomal protein L9, C-terminal domain VAPA_1c19060 PF01281 Ribosomal protein L9, N-terminal domain VAPA_1c19070 PF00772 DnaB-like helicase N terminal domain VAPA_1c19070 PF03796 DnaB-like helicase C terminal domain VAPA_1c19100 PF01878 EVE domain VAPA_1c19120 PF02562 PhoH-like protein VAPA_1c19120 PF13638 PIN domain VAPA_1c19130 PF00578 AhpC/TSA family VAPA_1c19150 PF00155 Aminotransferase class I and II VAPA_1c19160 PF00742 Homoserine dehydrogenase VAPA_1c19160 PF03447 Homoserine dehydrogenase, NAD binding domain VAPA_1c19160 PF01842 ACT domain VAPA_1c19170 PF00291 Pyridoxal-phosphate dependent enzyme VAPA_1c19170 PF14821 Threonine synthase N terminus VAPA_1c19180 PF03205 Molybdopterin guanine dinucleotide synthesis protein B VAPA_1c19190 PF03453 MoeA N-terminal region (domain I and II) VAPA_1c19190 PF00994 Probable molybdopterin binding domain VAPA_1c19190 PF03454 MoeA C-terminal region (domain IV) VAPA_1c19200 PF02597 ThiS family VAPA_1c19210 PF00701 Dihydrodipicolinate synthetase family VAPA_1c19220 PF02391 MoaE protein VAPA_1c19230 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_1c19240 PF10431 C-terminal, D2-small domain, of ClpB protein VAPA_1c19240 PF17871 AAA lid domain VAPA_1c19240 PF02861 Clp amino terminal domain, pathogenicity island component VAPA_1c19240 PF07724 AAA domain (Cdc48 subfamily) VAPA_1c19240 PF00004 ATPase family associated with various cellular activities (AAA) VAPA_1c19260 PF00501 AMP-binding enzyme VAPA_1c19270 PF00005 ABC transporter VAPA_1c19310 PF12399 Branched-chain amino acid ATP-binding cassette transporter VAPA_1c19310 PF00005 ABC transporter VAPA_1c19320 PF00440 Bacterial regulatory proteins, tetR family VAPA_1c19320 PF17754 MftR C-terminal domain VAPA_1c19330 PF00108 Thiolase, N-terminal domain VAPA_1c19330 PF02803 Thiolase, C-terminal domain VAPA_1c19340 PF00472 RF-1 domain VAPA_1c19370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c19370 PF03466 LysR substrate binding domain VAPA_1c19380 PF01740 STAS domain VAPA_1c19380 PF00916 Sulfate permease family VAPA_1c19400 PF00109 Beta-ketoacyl synthase, N-terminal domain VAPA_1c19400 PF02801 Beta-ketoacyl synthase, C-terminal domain VAPA_1c19410 PF00550 Phosphopantetheine attachment site VAPA_1c19440 PF07690 Major Facilitator Superfamily VAPA_1c19450 PF03960 ArsC family VAPA_1c19470 PF00885 6,7-dimethyl-8-ribityllumazine synthase VAPA_1c19480 PF06224 Winged helix DNA-binding domain VAPA_1c19510 PF02894 Oxidoreductase family, C-terminal alpha/beta domain VAPA_1c19510 PF01408 Oxidoreductase family, NAD-binding Rossmann fold VAPA_1c19530 PF00005 ABC transporter VAPA_1c19540 PF09084 NMT1/THI5 like VAPA_1c19550 PF00528 Binding-protein-dependent transport system inner membrane component VAPA_1c19560 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_1c19570 PF17938 Tetracyclin repressor-like, C-terminal domain VAPA_1c19570 PF00440 Bacterial regulatory proteins, tetR family VAPA_1c19580 PF00205 Thiamine pyrophosphate enzyme, central domain VAPA_1c19580 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VAPA_1c19580 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VAPA_1c19640 PF00463 Isocitrate lyase family VAPA_1c19650 PF02824 TGS domain VAPA_1c19650 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) VAPA_1c19650 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain VAPA_1c19650 PF03129 Anticodon binding domain VAPA_1c19660 PF05198 Translation initiation factor IF-3, N-terminal domain VAPA_1c19660 PF00707 Translation initiation factor IF-3, C-terminal domain VAPA_1c19670 PF01632 Ribosomal protein L35 VAPA_1c19680 PF00453 Ribosomal protein L20 VAPA_1c19690 PF01409 tRNA synthetases class II core domain (F) VAPA_1c19690 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain VAPA_1c19700 PF03484 tRNA synthetase B5 domain VAPA_1c19700 PF03147 Ferredoxin-fold anticodon binding domain VAPA_1c19700 PF01588 Putative tRNA binding domain VAPA_1c19700 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain VAPA_1c19700 PF03483 B3/4 domain VAPA_1c19710 PF00216 Bacterial DNA-binding protein VAPA_1c19810 PF00565 Staphylococcal nuclease homologue VAPA_1c19850 PF13356 Arm DNA-binding domain VAPA_1c19850 PF00589 Phage integrase family VAPA_1c19870 PF01022 Bacterial regulatory protein, arsR family VAPA_1c19910 PF01451 Low molecular weight phosphotyrosine protein phosphatase VAPA_1c19920 PF02040 Arsenical pump membrane protein VAPA_1c19930 PF03960 ArsC family VAPA_1c19940 PF03358 NADPH-dependent FMN reductase VAPA_1c19970 PF00672 HAMP domain VAPA_1c19970 PF00512 His Kinase A (phospho-acceptor) domain VAPA_1c19970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAPA_1c19980 PF00072 Response regulator receiver domain VAPA_1c19980 PF00486 Transcriptional regulatory protein, C terminal VAPA_1c20010 PF00005 ABC transporter VAPA_1c20080 PF16916 Dimerisation domain of Zinc Transporter VAPA_1c20080 PF01545 Cation efflux family VAPA_1c20110 PF03773 Predicted permease VAPA_1c20150 PF07729 FCD domain VAPA_1c20150 PF00392 Bacterial regulatory proteins, gntR family VAPA_1c20160 PF07508 Recombinase VAPA_1c20160 PF13408 Recombinase zinc beta ribbon domain VAPA_1c20160 PF00239 Resolvase, N terminal domain VAPA_1c20170 PF08671 Anti-repressor SinI VAPA_1c20170 PF01381 Helix-turn-helix VAPA_1c20180 PF00180 Isocitrate/isopropylmalate dehydrogenase VAPA_1c20200 PF13609 Gram-negative porin VAPA_1c20210 PF00501 AMP-binding enzyme VAPA_1c20210 PF13193 AMP-binding enzyme C-terminal domain VAPA_1c20220 PF00107 Zinc-binding dehydrogenase VAPA_1c20220 PF08240 Alcohol dehydrogenase GroES-like domain VAPA_1c20240 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_1c20250 PF05853 beta-keto acid cleavage enzyme VAPA_1c20260 PF02668 Taurine catabolism dioxygenase TauD, TfdA family VAPA_1c20270 PF13191 AAA ATPase domain VAPA_1c20270 PF00069 Protein kinase domain VAPA_1c20280 PF12833 Helix-turn-helix domain VAPA_1c20290 PF13609 Gram-negative porin VAPA_1c20300 PF08240 Alcohol dehydrogenase GroES-like domain VAPA_1c20300 PF00107 Zinc-binding dehydrogenase VAPA_1c20310 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_1c20320 PF02668 Taurine catabolism dioxygenase TauD, TfdA family VAPA_1c20330 PF05853 beta-keto acid cleavage enzyme VAPA_1c20340 PF12833 Helix-turn-helix domain VAPA_1c20340 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term VAPA_1c20350 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_1c20360 PF05853 beta-keto acid cleavage enzyme VAPA_1c20380 PF07992 Pyridine nucleotide-disulphide oxidoreductase VAPA_1c20380 PF14759 Reductase C-terminal VAPA_1c20390 PF00355 Rieske [2Fe-2S] domain VAPA_1c20400 PF13577 SnoaL-like domain VAPA_1c20410 PF00848 Ring hydroxylating alpha subunit (catalytic domain) VAPA_1c20410 PF00355 Rieske [2Fe-2S] domain VAPA_1c20420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c20420 PF03466 LysR substrate binding domain VAPA_1c20430 PF09339 IclR helix-turn-helix domain VAPA_1c20440 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_1c20450 PF00378 Enoyl-CoA hydratase/isomerase VAPA_1c20460 PF13380 CoA binding domain VAPA_1c20460 PF13607 Succinyl-CoA ligase like flavodoxin domain VAPA_1c20460 PF00583 Acetyltransferase (GNAT) family VAPA_1c20470 PF03972 MmgE/PrpD family VAPA_1c20490 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_1c20500 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_1c20510 PF12697 Alpha/beta hydrolase family VAPA_1c20520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAPA_1c20520 PF00512 His Kinase A (phospho-acceptor) domain VAPA_1c20530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c20530 PF03466 LysR substrate binding domain VAPA_1c20540 PF00857 Isochorismatase family VAPA_1c20610 PF10531 SLBB domain VAPA_1c20610 PF02563 Polysaccharide biosynthesis/export protein VAPA_1c20620 PF02397 Bacterial sugar transferase VAPA_1c20630 PF01370 NAD dependent epimerase/dehydratase family VAPA_1c20680 PF00793 DAHP synthetase I family VAPA_1c20690 PF01380 SIS domain VAPA_1c20690 PF00571 CBS domain VAPA_1c20700 PF01370 NAD dependent epimerase/dehydratase family VAPA_1c20710 PF13807 G-rich domain on putative tyrosine kinase VAPA_1c20710 PF02706 Chain length determinant protein VAPA_1c20710 PF13614 AAA domain VAPA_1c20720 PF01451 Low molecular weight phosphotyrosine protein phosphatase VAPA_1c20730 PF06082 Exopolysaccharide biosynthesis protein YbjH VAPA_1c20760 PF00149 Calcineurin-like phosphoesterase VAPA_1c20770 PF17042 Nucleotide-binding C-terminal domain VAPA_1c20770 PF07005 Sugar-binding N-terminal domain VAPA_1c20780 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain VAPA_1c20780 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain VAPA_1c20800 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VAPA_1c20810 PF03480 Bacterial extracellular solute-binding protein, family 7 VAPA_1c20820 PF00356 Bacterial regulatory proteins, lacI family VAPA_1c20830 PF03328 HpcH/HpaI aldolase/citrate lyase family VAPA_1c20840 PF00171 Aldehyde dehydrogenase family VAPA_1c20850 PF08666 SAF domain VAPA_1c20850 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus VAPA_1c20860 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_1c20870 PF03466 LysR substrate binding domain VAPA_1c20870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c20900 PF03358 NADPH-dependent FMN reductase VAPA_1c20910 PF03960 ArsC family VAPA_1c20920 PF01022 Bacterial regulatory protein, arsR family VAPA_1c20930 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VAPA_1c20940 PF01451 Low molecular weight phosphotyrosine protein phosphatase VAPA_1c20950 PF01451 Low molecular weight phosphotyrosine protein phosphatase VAPA_1c20960 PF01758 Sodium Bile acid symporter family VAPA_1c20990 PF00563 EAL domain VAPA_1c20990 PF08495 FIST N domain VAPA_1c20990 PF10442 FIST C domain VAPA_1c20990 PF00990 Diguanylate cyclase, GGDEF domain VAPA_1c21000 PF00437 Type II/IV secretion system protein VAPA_1c21000 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain VAPA_1c21010 PF03707 Bacterial signalling protein N terminal repeat VAPA_1c21010 PF00563 EAL domain VAPA_1c21010 PF13188 PAS domain VAPA_1c21010 PF00990 Diguanylate cyclase, GGDEF domain VAPA_1c21020 PF00156 Phosphoribosyl transferase domain VAPA_1c21020 PF05139 Erythromycin esterase VAPA_1c21030 PF05139 Erythromycin esterase VAPA_1c21030 PF00156 Phosphoribosyl transferase domain VAPA_1c21050 PF00011 Hsp20/alpha crystallin family VAPA_1c21060 PF00011 Hsp20/alpha crystallin family VAPA_1c21090 PF00128 Alpha amylase, catalytic domain VAPA_1c21090 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) VAPA_1c21090 PF02806 Alpha amylase, C-terminal all-beta domain VAPA_1c21100 PF11896 Domain of unknown function (DUF3416) VAPA_1c21100 PF00128 Alpha amylase, catalytic domain VAPA_1c21110 PF00128 Alpha amylase, catalytic domain VAPA_1c21110 PF16657 Maltogenic Amylase, C-terminal domain VAPA_1c21130 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) VAPA_1c21130 PF00128 Alpha amylase, catalytic domain VAPA_1c21140 PF11941 Domain of unknown function (DUF3459) VAPA_1c21140 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) VAPA_1c21140 PF00128 Alpha amylase, catalytic domain VAPA_1c21150 PF02446 4-alpha-glucanotransferase VAPA_1c21220 PF08241 Methyltransferase domain VAPA_1c21260 PF04239 Protein of unknown function (DUF421) VAPA_1c21280 PF00571 CBS domain VAPA_1c21290 PF00857 Isochorismatase family VAPA_1c21350 PF13091 PLD-like domain VAPA_1c21360 PF01551 Peptidase family M23 VAPA_1c21360 PF01476 LysM domain VAPA_1c21370 PF05981 CreA protein VAPA_1c21380 PF00293 NUDIX domain VAPA_1c21380 PF09297 NADH pyrophosphatase zinc ribbon domain VAPA_1c21390 PF01557 Fumarylacetoacetate (FAA) hydrolase family VAPA_1c21400 PF13417 Glutathione S-transferase, N-terminal domain VAPA_1c21430 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus VAPA_1c21440 PF02803 Thiolase, C-terminal domain VAPA_1c21440 PF00108 Thiolase, N-terminal domain VAPA_1c21450 PF03466 LysR substrate binding domain VAPA_1c21450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c21460 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_1c21480 PF02515 CoA-transferase family III VAPA_1c21490 PF03328 HpcH/HpaI aldolase/citrate lyase family VAPA_1c21500 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_1c21520 PF00994 Probable molybdopterin binding domain VAPA_1c21520 PF02464 Competence-damaged protein VAPA_1c21530 PF00106 short chain dehydrogenase VAPA_1c21540 PF00999 Sodium/hydrogen exchanger family VAPA_1c21540 PF02254 TrkA-N domain VAPA_1c21570 PF01842 ACT domain VAPA_1c21570 PF00742 Homoserine dehydrogenase VAPA_1c21570 PF03447 Homoserine dehydrogenase, NAD binding domain VAPA_1c21620 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_1c21650 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_1c21670 PF02525 Flavodoxin-like fold VAPA_1c21680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c21680 PF03466 LysR substrate binding domain VAPA_1c21690 PF00196 Bacterial regulatory proteins, luxR family VAPA_1c21690 PF00072 Response regulator receiver domain VAPA_1c21710 PF00664 ABC transporter transmembrane region VAPA_1c21710 PF00005 ABC transporter VAPA_1c21720 PF00664 ABC transporter transmembrane region VAPA_1c21720 PF00005 ABC transporter VAPA_1c21730 PF00529 HlyD membrane-fusion protein of T1SS VAPA_1c21740 PF02321 Outer membrane efflux protein VAPA_1c21750 PF01037 Lrp/AsnC ligand binding domain VAPA_1c21760 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VAPA_1c21760 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VAPA_1c21760 PF00205 Thiamine pyrophosphate enzyme, central domain VAPA_1c21770 PF06506 Propionate catabolism activator VAPA_1c21770 PF02954 Bacterial regulatory protein, Fis family VAPA_1c21770 PF00158 Sigma-54 interaction domain VAPA_1c21780 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_1c21800 PF00561 alpha/beta hydrolase fold VAPA_1c21810 PF01047 MarR family VAPA_1c21840 PF00449 Urease alpha-subunit, N-terminal domain VAPA_1c21840 PF01979 Amidohydrolase family VAPA_1c21860 PF00497 Bacterial extracellular solute-binding proteins, family 3 VAPA_1c21880 PF01144 Coenzyme A transferase VAPA_1c21890 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VAPA_1c21890 PF02770 Acyl-CoA dehydrogenase, middle domain VAPA_1c21890 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VAPA_1c21910 PF00356 Bacterial regulatory proteins, lacI family VAPA_1c21920 PF00701 Dihydrodipicolinate synthetase family VAPA_1c21930 PF00701 Dihydrodipicolinate synthetase family VAPA_1c21940 PF00005 ABC transporter VAPA_1c21970 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase VAPA_1c21970 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase VAPA_1c21990 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VAPA_1c21990 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VAPA_1c22000 PF08240 Alcohol dehydrogenase GroES-like domain VAPA_1c22000 PF00107 Zinc-binding dehydrogenase VAPA_1c22010 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family VAPA_1c22010 PF00356 Bacterial regulatory proteins, lacI family VAPA_1c22040 PF02769 AIR synthase related protein, C-terminal domain VAPA_1c22040 PF00586 AIR synthase related protein, N-terminal domain VAPA_1c22060 PF03781 Sulfatase-modifying factor enzyme 1 VAPA_1c22060 PF12867 DinB superfamily VAPA_1c22080 PF00005 ABC transporter VAPA_1c22090 PF00528 Binding-protein-dependent transport system inner membrane component VAPA_1c22100 PF00528 Binding-protein-dependent transport system inner membrane component VAPA_1c22110 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term VAPA_1c22110 PF12833 Helix-turn-helix domain VAPA_1c22120 PF00881 Nitroreductase family VAPA_1c22130 PF13193 AMP-binding enzyme C-terminal domain VAPA_1c22130 PF00501 AMP-binding enzyme VAPA_1c22160 PF00027 Cyclic nucleotide-binding domain VAPA_1c22160 PF13545 Crp-like helix-turn-helix domain VAPA_1c22170 PF07519 Tannase and feruloyl esterase VAPA_1c22180 PF08139 Prokaryotic membrane lipoprotein lipid attachment site VAPA_1c22180 PF02321 Outer membrane efflux protein VAPA_1c22190 PF00440 Bacterial regulatory proteins, tetR family VAPA_1c22210 PF00873 AcrB/AcrD/AcrF family VAPA_1c22220 PF00106 short chain dehydrogenase VAPA_1c22230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c22230 PF03466 LysR substrate binding domain VAPA_1c22240 PF02311 AraC-like ligand binding domain VAPA_1c22240 PF12833 Helix-turn-helix domain VAPA_1c22260 PF02954 Bacterial regulatory protein, Fis family VAPA_1c22260 PF01590 GAF domain VAPA_1c22260 PF00158 Sigma-54 interaction domain VAPA_1c22270 PF00753 Metallo-beta-lactamase superfamily VAPA_1c22280 PF02560 Cyanate lyase C-terminal domain VAPA_1c22290 PF00005 ABC transporter VAPA_1c22300 PF00528 Binding-protein-dependent transport system inner membrane component VAPA_1c22320 PF18113 Rubredoxin binding C-terminal domain VAPA_1c22320 PF07992 Pyridine nucleotide-disulphide oxidoreductase VAPA_1c22350 PF14525 AraC-binding-like domain VAPA_1c22350 PF12833 Helix-turn-helix domain VAPA_1c22370 PF01738 Dienelactone hydrolase family VAPA_1c22380 PF00111 2Fe-2S iron-sulfur cluster binding domain VAPA_1c22380 PF00175 Oxidoreductase NAD-binding domain VAPA_1c22390 PF00355 Rieske [2Fe-2S] domain VAPA_1c22390 PF00848 Ring hydroxylating alpha subunit (catalytic domain) VAPA_1c22430 PF00155 Aminotransferase class I and II VAPA_1c22440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c22440 PF03466 LysR substrate binding domain VAPA_1c22450 PF00497 Bacterial extracellular solute-binding proteins, family 3 VAPA_1c22460 PF00528 Binding-protein-dependent transport system inner membrane component VAPA_1c22470 PF00528 Binding-protein-dependent transport system inner membrane component VAPA_1c22480 PF00005 ABC transporter VAPA_1c22500 PF03328 HpcH/HpaI aldolase/citrate lyase family VAPA_1c22510 PF01494 FAD binding domain VAPA_1c22520 PF00171 Aldehyde dehydrogenase family VAPA_1c22530 PF00596 Class II Aldolase and Adducin N-terminal domain VAPA_1c22550 PF00866 Ring hydroxylating beta subunit VAPA_1c22570 PF00355 Rieske [2Fe-2S] domain VAPA_1c22570 PF00848 Ring hydroxylating alpha subunit (catalytic domain) VAPA_1c22580 PF00175 Oxidoreductase NAD-binding domain VAPA_1c22580 PF00111 2Fe-2S iron-sulfur cluster binding domain VAPA_1c22580 PF00970 Oxidoreductase FAD-binding domain VAPA_1c22600 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_1c22610 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_1c22620 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VAPA_1c22620 PF00205 Thiamine pyrophosphate enzyme, central domain VAPA_1c22620 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VAPA_1c22630 PF00171 Aldehyde dehydrogenase family VAPA_1c22640 PF01557 Fumarylacetoacetate (FAA) hydrolase family VAPA_1c22650 PF01557 Fumarylacetoacetate (FAA) hydrolase family VAPA_1c22660 PF00171 Aldehyde dehydrogenase family VAPA_1c22670 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase VAPA_1c22680 PF01557 Fumarylacetoacetate (FAA) hydrolase family VAPA_1c22690 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_1c22700 PF07687 Peptidase dimerisation domain VAPA_1c22700 PF01546 Peptidase family M20/M25/M40 VAPA_1c22710 PF07519 Tannase and feruloyl esterase VAPA_1c22720 PF07519 Tannase and feruloyl esterase VAPA_1c22730 PF13932 GidA associated domain VAPA_1c22730 PF01134 Glucose inhibited division protein A VAPA_1c22740 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_1c22750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c22750 PF03466 LysR substrate binding domain VAPA_1c22760 PF01609 Transposase DDE domain VAPA_1c22760 PF05598 Transposase domain (DUF772) VAPA_1c22770 PF03466 LysR substrate binding domain VAPA_1c22770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c22780 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_1c22810 PF00171 Aldehyde dehydrogenase family VAPA_1c22820 PF01557 Fumarylacetoacetate (FAA) hydrolase family VAPA_1c22830 PF01557 Fumarylacetoacetate (FAA) hydrolase family VAPA_1c22840 PF01361 Tautomerase enzyme VAPA_1c22850 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation VAPA_1c22850 PF01118 Semialdehyde dehydrogenase, NAD binding domain VAPA_1c22860 PF00682 HMGL-like VAPA_1c22860 PF07836 DmpG-like communication domain VAPA_1c22890 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_1c22910 PF01207 Dihydrouridine synthase (Dus) VAPA_1c22930 PF09339 IclR helix-turn-helix domain VAPA_1c22940 PF07729 FCD domain VAPA_1c22940 PF00392 Bacterial regulatory proteins, gntR family VAPA_1c22980 PF01039 Carboxyl transferase domain VAPA_1c22990 PF02785 Biotin carboxylase C-terminal domain VAPA_1c22990 PF00289 Biotin carboxylase, N-terminal domain VAPA_1c22990 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain VAPA_1c23000 PF06968 Biotin and Thiamin Synthesis associated domain VAPA_1c23000 PF04055 Radical SAM superfamily VAPA_1c23040 PF01037 Lrp/AsnC ligand binding domain VAPA_1c23050 PF00892 EamA-like transporter family VAPA_1c23070 PF04060 Putative Fe-S cluster VAPA_1c23090 PF00155 Aminotransferase class I and II VAPA_1c23110 PF02082 Transcriptional regulator VAPA_1c23120 PF00266 Aminotransferase class-V VAPA_1c23130 PF01592 NifU-like N terminal domain VAPA_1c23140 PF01521 Iron-sulphur cluster biosynthesis VAPA_1c23150 PF07743 HSCB C-terminal oligomerisation domain VAPA_1c23160 PF00012 Hsp70 protein VAPA_1c23170 PF00111 2Fe-2S iron-sulfur cluster binding domain VAPA_1c23180 PF00929 Exonuclease VAPA_1c23300 PF01266 FAD dependent oxidoreductase VAPA_1c23330 PF01180 Dihydroorotate dehydrogenase VAPA_1c23340 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) VAPA_1c23360 PF01432 Peptidase family M3 VAPA_1c23370 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain VAPA_1c23370 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain VAPA_1c23380 PF00196 Bacterial regulatory proteins, luxR family VAPA_1c23380 PF00072 Response regulator receiver domain VAPA_1c23390 PF00512 His Kinase A (phospho-acceptor) domain VAPA_1c23390 PF00989 PAS fold VAPA_1c23390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAPA_1c23400 PF00456 Transketolase, thiamine diphosphate binding domain VAPA_1c23400 PF17831 Pyruvate dehydrogenase E1 component middle domain VAPA_1c23410 PF02817 e3 binding domain VAPA_1c23410 PF00364 Biotin-requiring enzyme VAPA_1c23410 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) VAPA_1c23420 PF00227 Proteasome subunit VAPA_1c23430 PF07992 Pyridine nucleotide-disulphide oxidoreductase VAPA_1c23430 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VAPA_1c23440 PF00877 NlpC/P60 family VAPA_1c23450 PF07995 Glucose / Sorbosone dehydrogenase VAPA_1c23500 PF13193 AMP-binding enzyme C-terminal domain VAPA_1c23500 PF00501 AMP-binding enzyme VAPA_1c23500 PF16177 Acetyl-coenzyme A synthetase N-terminus VAPA_1c23510 PF16078 2-oxoglutarate dehydrogenase N-terminus VAPA_1c23510 PF00676 Dehydrogenase E1 component VAPA_1c23510 PF16870 2-oxoglutarate dehydrogenase C-terminal VAPA_1c23510 PF02779 Transketolase, pyrimidine binding domain VAPA_1c23520 PF02817 e3 binding domain VAPA_1c23520 PF00364 Biotin-requiring enzyme VAPA_1c23520 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) VAPA_1c23530 PF07992 Pyridine nucleotide-disulphide oxidoreductase VAPA_1c23530 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VAPA_1c23540 PF03969 AFG1-like ATPase VAPA_1c23580 PF06733 DEAD_2 VAPA_1c23580 PF13307 Helicase C-terminal domain VAPA_1c23590 PF13525 Outer membrane lipoprotein VAPA_1c23600 PF01479 S4 domain VAPA_1c23600 PF00849 RNA pseudouridylate synthase VAPA_1c23610 PF04079 Segregation and condensation complex subunit ScpB VAPA_1c23620 PF00849 RNA pseudouridylate synthase VAPA_1c23620 PF01479 S4 domain VAPA_1c23630 PF00334 Nucleoside diphosphate kinase VAPA_1c23640 PF04055 Radical SAM superfamily VAPA_1c23670 PF04551 GcpE protein VAPA_1c23680 PF13393 Histidyl-tRNA synthetase VAPA_1c23680 PF03129 Anticodon binding domain VAPA_1c23700 PF13360 PQQ-like domain VAPA_1c23710 PF01926 50S ribosome-binding GTPase VAPA_1c23710 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal VAPA_1c23720 PF17209 Hfq protein VAPA_1c23730 PF13167 GTP-binding GTPase N-terminal VAPA_1c23730 PF16360 GTP-binding GTPase Middle Region VAPA_1c23730 PF01926 50S ribosome-binding GTPase VAPA_1c23740 PF12221 Bacterial membrane protein N terminal VAPA_1c23740 PF01145 SPFH domain / Band 7 family VAPA_1c23750 PF01145 SPFH domain / Band 7 family VAPA_1c23770 PF13393 Histidyl-tRNA synthetase VAPA_1c23780 PF00709 Adenylosuccinate synthetase VAPA_1c23830 PF01053 Cys/Met metabolism PLP-dependent enzyme VAPA_1c23850 PF13472 GDSL-like Lipase/Acylhydrolase family VAPA_1c23860 PF00005 ABC transporter VAPA_1c23880 PF00588 SpoU rRNA Methylase family VAPA_1c23880 PF08032 RNA 2'-O ribose methyltransferase substrate binding VAPA_1c23920 PF00248 Aldo/keto reductase family VAPA_1c23930 PF02417 Chromate transporter VAPA_1c23950 PF03631 Virulence factor BrkB VAPA_1c24020 PF01970 Tripartite tricarboxylate transporter TctA family VAPA_1c24040 PF08497 Radical SAM N-terminal VAPA_1c24040 PF11842 Domain of unknown function (DUF3362) VAPA_1c24040 PF04055 Radical SAM superfamily VAPA_1c24130 PF00378 Enoyl-CoA hydratase/isomerase VAPA_1c24150 PF01168 Alanine racemase, N-terminal domain VAPA_1c24150 PF14031 Putative serine dehydratase domain VAPA_1c24170 PF01425 Amidase VAPA_1c24190 PF00005 ABC transporter VAPA_1c24200 PF00528 Binding-protein-dependent transport system inner membrane component VAPA_1c24210 PF00528 Binding-protein-dependent transport system inner membrane component VAPA_1c24220 PF00596 Class II Aldolase and Adducin N-terminal domain VAPA_1c24230 PF02668 Taurine catabolism dioxygenase TauD, TfdA family VAPA_1c24240 PF00392 Bacterial regulatory proteins, gntR family VAPA_1c24240 PF07729 FCD domain VAPA_1c24260 PF00155 Aminotransferase class I and II VAPA_1c24270 PF00561 alpha/beta hydrolase fold VAPA_1c24280 PF07687 Peptidase dimerisation domain VAPA_1c24280 PF01546 Peptidase family M20/M25/M40 VAPA_1c24350 PF13006 Insertion element 4 transposase N-terminal VAPA_1c24350 PF01609 Transposase DDE domain VAPA_1c24430 PF02798 Glutathione S-transferase, N-terminal domain VAPA_1c24430 PF00043 Glutathione S-transferase, C-terminal domain VAPA_1c24440 PF07992 Pyridine nucleotide-disulphide oxidoreductase VAPA_1c24460 PF02503 Polyphosphate kinase middle domain VAPA_1c24460 PF13090 Polyphosphate kinase C-terminal domain 2 VAPA_1c24460 PF17941 Polyphosphate kinase C-terminal domain 1 VAPA_1c24460 PF13089 Polyphosphate kinase N-terminal domain VAPA_1c24500 PF02541 Ppx/GppA phosphatase family VAPA_1c24510 PF12849 PBP superfamily domain VAPA_1c24520 PF00528 Binding-protein-dependent transport system inner membrane component VAPA_1c24530 PF00528 Binding-protein-dependent transport system inner membrane component VAPA_1c24540 PF00005 ABC transporter VAPA_1c24550 PF01895 PhoU domain VAPA_1c24560 PF00486 Transcriptional regulatory protein, C terminal VAPA_1c24560 PF00072 Response regulator receiver domain VAPA_1c24570 PF00512 His Kinase A (phospho-acceptor) domain VAPA_1c24570 PF00989 PAS fold VAPA_1c24570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAPA_1c24570 PF11808 Phosphate regulon sensor protein PhoR VAPA_1c24580 PF01554 MatE VAPA_1c24600 PF01197 Ribosomal protein L31 VAPA_1c24610 PF01408 Oxidoreductase family, NAD-binding Rossmann fold VAPA_1c24610 PF02894 Oxidoreductase family, C-terminal alpha/beta domain VAPA_1c24620 PF07498 Rho termination factor, N-terminal domain VAPA_1c24620 PF07497 Rho termination factor, RNA-binding domain VAPA_1c24620 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VAPA_1c24630 PF00085 Thioredoxin VAPA_1c24650 PF12705 PD-(D/E)XK nuclease superfamily VAPA_1c24650 PF00580 UvrD/REP helicase N-terminal domain VAPA_1c24650 PF13361 UvrD-like helicase C-terminal domain VAPA_1c24670 PF01638 HxlR-like helix-turn-helix VAPA_1c24680 PF08241 Methyltransferase domain VAPA_1c24690 PF12169 DNA polymerase III subunits gamma and tau domain III VAPA_1c24690 PF12170 DNA polymerase III tau subunit V interacting with alpha VAPA_1c24690 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding VAPA_1c24700 PF02575 YbaB/EbfC DNA-binding family VAPA_1c24710 PF13662 Toprim domain VAPA_1c24710 PF02132 RecR protein VAPA_1c24740 PF00005 ABC transporter VAPA_1c24750 PF00528 Binding-protein-dependent transport system inner membrane component VAPA_1c24760 PF01464 Transglycosylase SLT domain VAPA_1c24760 PF01476 LysM domain VAPA_1c24770 PF16123 Hydroxyacylglutathione hydrolase C-terminus VAPA_1c24770 PF00753 Metallo-beta-lactamase superfamily VAPA_1c24780 PF01209 ubiE/COQ5 methyltransferase family VAPA_1c24790 PF00075 RNase H VAPA_1c24800 PF03454 MoeA C-terminal region (domain IV) VAPA_1c24800 PF03453 MoeA N-terminal region (domain I and II) VAPA_1c24800 PF00994 Probable molybdopterin binding domain VAPA_1c24810 PF12804 MobA-like NTP transferase domain VAPA_1c24820 PF04055 Radical SAM superfamily VAPA_1c24820 PF06463 Molybdenum Cofactor Synthesis C VAPA_1c24830 PF00171 Aldehyde dehydrogenase family VAPA_1c24850 PF13091 PLD-like domain VAPA_1c24960 PF03030 Inorganic H+ pyrophosphatase VAPA_1c24970 PF00719 Inorganic pyrophosphatase VAPA_1c24990 PF00795 Carbon-nitrogen hydrolase VAPA_1c24990 PF02540 NAD synthase VAPA_1c25000 PF00543 Nitrogen regulatory protein P-II VAPA_1c25010 PF03641 Possible lysine decarboxylase VAPA_1c25020 PF01219 Prokaryotic diacylglycerol kinase VAPA_1c25070 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VAPA_1c25070 PF00205 Thiamine pyrophosphate enzyme, central domain VAPA_1c25070 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VAPA_1c25080 PF10369 Small subunit of acetolactate synthase VAPA_1c25100 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain VAPA_1c25100 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain VAPA_1c25110 PF01066 CDP-alcohol phosphatidyltransferase VAPA_1c25120 PF08502 LeuA allosteric (dimerisation) domain VAPA_1c25120 PF00682 HMGL-like VAPA_1c25130 PF00682 HMGL-like VAPA_1c25130 PF08502 LeuA allosteric (dimerisation) domain VAPA_1c25140 PF00768 D-alanyl-D-alanine carboxypeptidase VAPA_1c25150 PF09339 IclR helix-turn-helix domain VAPA_1c25150 PF01614 Bacterial transcriptional regulator VAPA_1c25160 PF04376 Arginine-tRNA-protein transferase, N terminus VAPA_1c25160 PF04377 Arginine-tRNA-protein transferase, C terminus VAPA_1c25170 PF03588 Leucyl/phenylalanyl-tRNA protein transferase VAPA_1c25180 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain VAPA_1c25180 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase VAPA_1c25190 PF12833 Helix-turn-helix domain VAPA_1c25220 PF01494 FAD binding domain VAPA_1c25230 PF01614 Bacterial transcriptional regulator VAPA_1c25230 PF09339 IclR helix-turn-helix domain VAPA_1c25240 PF00486 Transcriptional regulatory protein, C terminal VAPA_1c25240 PF00072 Response regulator receiver domain VAPA_1c25250 PF00512 His Kinase A (phospho-acceptor) domain VAPA_1c25250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAPA_1c25250 PF08521 Two-component sensor kinase N-terminal VAPA_1c25260 PF17820 PDZ domain VAPA_1c25260 PF13180 PDZ domain VAPA_1c25330 PF07715 TonB-dependent Receptor Plug Domain VAPA_1c25330 PF00593 TonB dependent receptor VAPA_1c25340 PF02581 Thiamine monophosphate synthase VAPA_1c25350 PF05690 Thiazole biosynthesis protein ThiG VAPA_1c25370 PF01266 FAD dependent oxidoreductase VAPA_1c25380 PF08543 Phosphomethylpyrimidine kinase VAPA_1c25420 PF06983 3-demethylubiquinone-9 3-methyltransferase VAPA_1c25430 PF00202 Aminotransferase class-III VAPA_1c25450 PF11953 Domain of unknown function (DUF3470) VAPA_1c25450 PF00037 4Fe-4S binding domain VAPA_1c25460 PF00009 Elongation factor Tu GTP binding domain VAPA_1c25470 PF01507 Phosphoadenosine phosphosulfate reductase family VAPA_1c25480 PF01507 Phosphoadenosine phosphosulfate reductase family VAPA_1c25520 PF03576 Peptidase family S58 VAPA_1c25530 PF12911 N-terminal TM domain of oligopeptide transport permease C VAPA_1c25530 PF00528 Binding-protein-dependent transport system inner membrane component VAPA_1c25540 PF00528 Binding-protein-dependent transport system inner membrane component VAPA_1c25550 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VAPA_1c25560 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VAPA_1c25560 PF00005 ABC transporter VAPA_1c25570 PF01112 Asparaginase VAPA_1c25600 PF00376 MerR family regulatory protein VAPA_1c25600 PF09278 MerR, DNA binding VAPA_1c25620 PF00248 Aldo/keto reductase family VAPA_1c25630 PF03466 LysR substrate binding domain VAPA_1c25630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c25640 PF01266 FAD dependent oxidoreductase VAPA_1c25650 PF00274 Fructose-bisphosphate aldolase class-I VAPA_1c25660 PF01625 Peptide methionine sulfoxide reductase VAPA_1c25680 PF00378 Enoyl-CoA hydratase/isomerase VAPA_1c25700 PF05430 S-adenosyl-L-methionine-dependent methyltransferase VAPA_1c25700 PF01266 FAD dependent oxidoreductase VAPA_1c25710 PF04362 Bacterial Fe(2+) trafficking VAPA_1c25730 PF03358 NADPH-dependent FMN reductase VAPA_1c25750 PF09084 NMT1/THI5 like VAPA_1c25770 PF00296 Luciferase-like monooxygenase VAPA_1c25780 PF00528 Binding-protein-dependent transport system inner membrane component VAPA_1c25790 PF00005 ABC transporter VAPA_1c25800 PF01053 Cys/Met metabolism PLP-dependent enzyme VAPA_1c25810 PF03459 TOBE domain VAPA_1c25820 PF00132 Bacterial transferase hexapeptide (six repeats) VAPA_1c25830 PF04820 Tryptophan halogenase VAPA_1c25850 PF08546 Ketopantoate reductase PanE/ApbA C terminal VAPA_1c25850 PF02558 Ketopantoate reductase PanE/ApbA VAPA_1c25860 PF03358 NADPH-dependent FMN reductase VAPA_1c25870 PF02525 Flavodoxin-like fold VAPA_1c25880 PF03466 LysR substrate binding domain VAPA_1c25880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c25890 PF10417 C-terminal domain of 1-Cys peroxiredoxin VAPA_1c25890 PF00578 AhpC/TSA family VAPA_1c25920 PF00528 Binding-protein-dependent transport system inner membrane component VAPA_1c25930 PF00528 Binding-protein-dependent transport system inner membrane component VAPA_1c25940 PF00005 ABC transporter VAPA_1c25940 PF17850 CysA C-terminal regulatory domain VAPA_1c25940 PF12857 TOBE-like domain VAPA_1c25950 PF02600 Disulfide bond formation protein DsbB VAPA_1c25970 PF07804 HipA-like C-terminal domain VAPA_1c25970 PF13657 HipA N-terminal domain VAPA_1c26000 PF02463 RecF/RecN/SMC N terminal domain VAPA_1c26000 PF06470 SMC proteins Flexible Hinge Domain VAPA_1c26020 PF01653 NAD-dependent DNA ligase adenylation domain VAPA_1c26020 PF00533 BRCA1 C Terminus (BRCT) domain VAPA_1c26020 PF12826 Helix-hairpin-helix motif VAPA_1c26020 PF03119 NAD-dependent DNA ligase C4 zinc finger domain VAPA_1c26020 PF03120 NAD-dependent DNA ligase OB-fold domain VAPA_1c26040 PF01327 Polypeptide deformylase VAPA_1c26060 PF00497 Bacterial extracellular solute-binding proteins, family 3 VAPA_1c26070 PF00528 Binding-protein-dependent transport system inner membrane component VAPA_1c26080 PF00528 Binding-protein-dependent transport system inner membrane component VAPA_1c26100 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III VAPA_1c26100 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II VAPA_1c26100 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I VAPA_1c26100 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain VAPA_1c26110 PF01966 HD domain VAPA_1c26110 PF08335 GlnD PII-uridylyltransferase VAPA_1c26110 PF01909 Nucleotidyltransferase domain VAPA_1c26120 PF00557 Metallopeptidase family M24 VAPA_1c26130 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain VAPA_1c26130 PF02769 AIR synthase related protein, C-terminal domain VAPA_1c26130 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal VAPA_1c26160 PF04279 Intracellular septation protein A VAPA_1c26170 PF01641 SelR domain VAPA_1c26180 PF02696 Uncharacterized ACR, YdiU/UPF0061 family VAPA_1c26200 PF00135 Carboxylesterase family VAPA_1c26210 PF00501 AMP-binding enzyme VAPA_1c26210 PF13193 AMP-binding enzyme C-terminal domain VAPA_1c26240 PF02653 Branched-chain amino acid transport system / permease component VAPA_1c26260 PF00005 ABC transporter VAPA_1c26260 PF12399 Branched-chain amino acid ATP-binding cassette transporter VAPA_1c26280 PF00005 ABC transporter VAPA_1c26290 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain VAPA_1c26290 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain VAPA_1c26290 PF00378 Enoyl-CoA hydratase/isomerase VAPA_1c26300 PF07687 Peptidase dimerisation domain VAPA_1c26300 PF01546 Peptidase family M20/M25/M40 VAPA_1c26310 PF02803 Thiolase, C-terminal domain VAPA_1c26310 PF00108 Thiolase, N-terminal domain VAPA_1c26320 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VAPA_1c26320 PF12806 Acetyl-CoA dehydrogenase C-terminal like VAPA_1c26320 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VAPA_1c26320 PF02770 Acyl-CoA dehydrogenase, middle domain VAPA_1c26370 PF16884 N-terminal domain of oxidoreductase VAPA_1c26370 PF00107 Zinc-binding dehydrogenase VAPA_1c26380 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VAPA_1c26380 PF18158 Adaptive response protein AidB N-terminal domain VAPA_1c26380 PF02770 Acyl-CoA dehydrogenase, middle domain VAPA_1c26400 PF00106 short chain dehydrogenase VAPA_1c26410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c26410 PF03466 LysR substrate binding domain VAPA_1c26420 PF02525 Flavodoxin-like fold VAPA_1c26430 PF00248 Aldo/keto reductase family VAPA_1c26440 PF07690 Major Facilitator Superfamily VAPA_1c26450 PF03466 LysR substrate binding domain VAPA_1c26450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c26480 PF00266 Aminotransferase class-V VAPA_1c26490 PF00392 Bacterial regulatory proteins, gntR family VAPA_1c26490 PF07729 FCD domain VAPA_1c26500 PF13183 4Fe-4S dicluster domain VAPA_1c26500 PF02913 FAD linked oxidases, C-terminal domain VAPA_1c26500 PF01565 FAD binding domain VAPA_1c26510 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain VAPA_1c26510 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain VAPA_1c26530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c26530 PF03466 LysR substrate binding domain VAPA_1c26570 PF01435 Peptidase family M48 VAPA_1c26580 PF07690 Major Facilitator Superfamily VAPA_1c26590 PF07690 Major Facilitator Superfamily VAPA_1c26600 PF04403 Paraquat-inducible protein A VAPA_1c26610 PF04403 Paraquat-inducible protein A VAPA_1c26620 PF02470 MlaD protein VAPA_1c26640 PF07690 Major Facilitator Superfamily VAPA_1c26650 PF00326 Prolyl oligopeptidase family VAPA_1c26660 PF00486 Transcriptional regulatory protein, C terminal VAPA_1c26660 PF00072 Response regulator receiver domain VAPA_1c26670 PF00512 His Kinase A (phospho-acceptor) domain VAPA_1c26670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAPA_1c26680 PF01554 MatE VAPA_1c26730 PF08125 Mannitol dehydrogenase C-terminal domain VAPA_1c26730 PF01232 Mannitol dehydrogenase Rossmann domain VAPA_1c26740 PF13378 Enolase C-terminal domain-like VAPA_1c26740 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain VAPA_1c26750 PF00005 ABC transporter VAPA_1c26770 PF00528 Binding-protein-dependent transport system inner membrane component VAPA_1c26780 PF08240 Alcohol dehydrogenase GroES-like domain VAPA_1c26780 PF00107 Zinc-binding dehydrogenase VAPA_1c26810 PF07729 FCD domain VAPA_1c26810 PF00392 Bacterial regulatory proteins, gntR family VAPA_1c26820 PF17674 HHH domain VAPA_1c26820 PF00575 S1 RNA binding domain VAPA_1c26820 PF09371 Tex-like protein N-terminal domain VAPA_1c26820 PF16921 Tex protein YqgF-like domain VAPA_1c26840 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_1c26900 PF04717 Type VI secretion system, phage-baseplate injector VAPA_1c26910 PF00465 Iron-containing alcohol dehydrogenase VAPA_1c26920 PF07859 alpha/beta hydrolase fold VAPA_1c26950 PF01571 Aminomethyltransferase folate-binding domain VAPA_1c26960 PF02618 YceG-like family VAPA_1c26970 PF02223 Thymidylate kinase VAPA_1c26980 PF09115 DNA polymerase III, delta subunit, C terminal VAPA_1c27000 PF01026 TatD related DNase VAPA_1c27010 PF12796 Ankyrin repeats (3 copies) VAPA_1c27040 PF01894 Uncharacterised protein family UPF0047 VAPA_1c27050 PF07311 Dodecin VAPA_1c27060 PF18267 Rubredoxin NAD+ reductase C-terminal domain VAPA_1c27060 PF07992 Pyridine nucleotide-disulphide oxidoreductase VAPA_1c27060 PF01077 Nitrite and sulphite reductase 4Fe-4S domain VAPA_1c27060 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain VAPA_1c27060 PF04324 BFD-like [2Fe-2S] binding domain VAPA_1c27070 PF00355 Rieske [2Fe-2S] domain VAPA_1c27080 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases VAPA_1c27100 PF00069 Protein kinase domain VAPA_1c27100 PF03793 PASTA domain VAPA_1c27110 PF12951 Passenger-associated-transport-repeat VAPA_1c27130 PF07963 Prokaryotic N-terminal methylation motif VAPA_1c27130 PF14245 Type IV pilin PilA VAPA_1c27170 PF05567 Neisseria PilC beta-propeller domain VAPA_1c27220 PF00582 Universal stress protein family VAPA_1c27260 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase VAPA_1c27260 PF09363 XFP C-terminal domain VAPA_1c27260 PF09364 XFP N-terminal domain VAPA_1c27280 PF04055 Radical SAM superfamily VAPA_1c27280 PF06969 HemN C-terminal domain VAPA_1c27310 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase VAPA_1c27310 PF13746 4Fe-4S dicluster domain VAPA_1c27310 PF12801 4Fe-4S binding domain VAPA_1c27320 PF13442 Cytochrome C oxidase, cbb3-type, subunit III VAPA_1c27320 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP VAPA_1c27350 PF00115 Cytochrome C and Quinol oxidase polypeptide I VAPA_1c27370 PF00403 Heavy-metal-associated domain VAPA_1c27390 PF06719 AraC-type transcriptional regulator N-terminus VAPA_1c27390 PF12833 Helix-turn-helix domain VAPA_1c27400 PF00248 Aldo/keto reductase family VAPA_1c27430 PF00202 Aminotransferase class-III VAPA_1c27470 PF13307 Helicase C-terminal domain VAPA_1c27480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAPA_1c27480 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) VAPA_1c27480 PF00072 Response regulator receiver domain VAPA_1c27480 PF00672 HAMP domain VAPA_1c27480 PF01627 Hpt domain VAPA_1c27480 PF00512 His Kinase A (phospho-acceptor) domain VAPA_1c27490 PF03705 CheR methyltransferase, all-alpha domain VAPA_1c27490 PF01739 CheR methyltransferase, SAM binding domain VAPA_1c27500 PF01339 CheB methylesterase VAPA_1c27510 PF00512 His Kinase A (phospho-acceptor) domain VAPA_1c27510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAPA_1c27540 PF00211 Adenylate and Guanylate cyclase catalytic domain VAPA_1c27540 PF16701 Adenylate cyclase regulatory domain VAPA_1c27560 PF17676 LD-carboxypeptidase C-terminal domain VAPA_1c27560 PF02016 LD-carboxypeptidase N-terminal domain VAPA_1c27570 PF14437 MafB19-like deaminase VAPA_1c27620 PF00196 Bacterial regulatory proteins, luxR family VAPA_1c27620 PF00072 Response regulator receiver domain VAPA_1c27630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAPA_1c27630 PF13426 PAS domain VAPA_1c27630 PF00989 PAS fold VAPA_1c27630 PF13493 Domain of unknown function (DUF4118) VAPA_1c27630 PF00512 His Kinase A (phospho-acceptor) domain VAPA_1c27630 PF08447 PAS fold VAPA_1c27690 PF07715 TonB-dependent Receptor Plug Domain VAPA_1c27690 PF00593 TonB dependent receptor VAPA_1c27700 PF07683 Cobalamin synthesis protein cobW C-terminal domain VAPA_1c27700 PF02492 CobW/HypB/UreG, nucleotide-binding domain VAPA_1c27710 PF01297 Zinc-uptake complex component A periplasmic VAPA_1c27720 PF00950 ABC 3 transport family VAPA_1c27730 PF00005 ABC transporter VAPA_1c27780 PF01042 Endoribonuclease L-PSP VAPA_1c27800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c27800 PF03466 LysR substrate binding domain VAPA_1c27810 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_1c27820 PF07687 Peptidase dimerisation domain VAPA_1c27820 PF01546 Peptidase family M20/M25/M40 VAPA_1c27840 PF02272 DHHA1 domain VAPA_1c27840 PF01411 tRNA synthetases class II (A) VAPA_1c27840 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain VAPA_1c27870 PF00491 Arginase family VAPA_1c27880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c27880 PF03466 LysR substrate binding domain VAPA_1c27910 PF01638 HxlR-like helix-turn-helix VAPA_1c27940 PF00117 Glutamine amidotransferase class-I VAPA_1c27940 PF00958 GMP synthase C terminal domain VAPA_1c27940 PF02540 NAD synthase VAPA_1c27970 PF00478 IMP dehydrogenase / GMP reductase domain VAPA_1c27970 PF00571 CBS domain VAPA_1c27990 PF03658 RnfH family Ubiquitin VAPA_1c28000 PF03364 Polyketide cyclase / dehydrase and lipid transport VAPA_1c28010 PF01668 SmpB protein VAPA_1c28030 PF08281 Sigma-70, region 4 VAPA_1c28030 PF04542 Sigma-70 region 2 VAPA_1c28080 PF01509 TruB family pseudouridylate synthase (N terminal domain) VAPA_1c28080 PF16198 tRNA pseudouridylate synthase B C-terminal domain VAPA_1c28090 PF02033 Ribosome-binding factor A VAPA_1c28100 PF00009 Elongation factor Tu GTP binding domain VAPA_1c28100 PF08364 Bacterial translation initiation factor IF-2 associated region VAPA_1c28100 PF11987 Translation-initiation factor 2 VAPA_1c28100 PF04760 Translation initiation factor IF-2, N-terminal region VAPA_1c28110 PF13184 NusA-like KH domain VAPA_1c28110 PF08529 NusA N-terminal domain VAPA_1c28110 PF00575 S1 RNA binding domain VAPA_1c28120 PF02576 RimP N-terminal domain VAPA_1c28130 PF06779 Uncharacterised MFS-type transporter YbfB VAPA_1c28140 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VAPA_1c28140 PF00005 ABC transporter VAPA_1c28150 PF12911 N-terminal TM domain of oligopeptide transport permease C VAPA_1c28150 PF00528 Binding-protein-dependent transport system inner membrane component VAPA_1c28160 PF00528 Binding-protein-dependent transport system inner membrane component VAPA_1c28170 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VAPA_1c28190 PF01068 ATP dependent DNA ligase domain VAPA_1c28190 PF14743 DNA ligase OB-like domain VAPA_1c28200 PF01276 Orn/Lys/Arg decarboxylase, major domain VAPA_1c28200 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain VAPA_1c28200 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain VAPA_1c28220 PF01145 SPFH domain / Band 7 family VAPA_1c28260 PF13458 Periplasmic binding protein VAPA_1c28290 PF00883 Cytosol aminopeptidase family, catalytic domain VAPA_1c28290 PF02789 Cytosol aminopeptidase family, N-terminal domain VAPA_1c28330 PF03466 LysR substrate binding domain VAPA_1c28330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c28340 PF00155 Aminotransferase class I and II VAPA_1c28360 PF00270 DEAD/DEAH box helicase VAPA_1c28360 PF04408 Helicase associated domain (HA2) VAPA_1c28360 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold VAPA_1c28360 PF11898 Domain of unknown function (DUF3418) VAPA_1c28360 PF00271 Helicase conserved C-terminal domain VAPA_1c28370 PF17862 AAA+ lid domain VAPA_1c28370 PF00004 ATPase family associated with various cellular activities (AAA) VAPA_1c28370 PF01434 Peptidase family M41 VAPA_1c28370 PF06480 FtsH Extracellular VAPA_1c28380 PF00583 Acetyltransferase (GNAT) family VAPA_1c28380 PF00696 Amino acid kinase family VAPA_1c28390 PF01810 LysE type translocator VAPA_1c28400 PF08659 KR domain VAPA_1c28400 PF08240 Alcohol dehydrogenase GroES-like domain VAPA_1c28400 PF00550 Phosphopantetheine attachment site VAPA_1c28400 PF14765 Polyketide synthase dehydratase VAPA_1c28400 PF00698 Acyl transferase domain VAPA_1c28400 PF09277 Erythronolide synthase, docking VAPA_1c28400 PF16197 Ketoacyl-synthetase C-terminal extension VAPA_1c28400 PF00109 Beta-ketoacyl synthase, N-terminal domain VAPA_1c28400 PF08990 Erythronolide synthase docking VAPA_1c28400 PF02801 Beta-ketoacyl synthase, C-terminal domain VAPA_1c28410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c28410 PF03466 LysR substrate binding domain VAPA_1c28420 PF00155 Aminotransferase class I and II VAPA_1c28430 PF00132 Bacterial transferase hexapeptide (six repeats) VAPA_1c28430 PF14602 Hexapeptide repeat of succinyl-transferase VAPA_1c28430 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal VAPA_1c28440 PF00437 Type II/IV secretion system protein VAPA_1c28450 PF01546 Peptidase family M20/M25/M40 VAPA_1c28450 PF07687 Peptidase dimerisation domain VAPA_1c28460 PF05175 Methyltransferase small domain VAPA_1c28510 PF00899 ThiF family VAPA_1c28530 PF00691 OmpA family VAPA_1c28540 PF07676 WD40-like Beta Propeller Repeat VAPA_1c28540 PF04052 TolB amino-terminal domain VAPA_1c28550 PF00664 ABC transporter transmembrane region VAPA_1c28550 PF00005 ABC transporter VAPA_1c28560 PF10150 Ribonuclease E/G family VAPA_1c28560 PF00575 S1 RNA binding domain VAPA_1c28570 PF02545 Maf-like protein VAPA_1c28580 PF02590 Predicted SPOUT methyltransferase VAPA_1c28600 PF01467 Cytidylyltransferase-like VAPA_1c28610 PF01218 Coproporphyrinogen III oxidase VAPA_1c28620 PF02843 Phosphoribosylglycinamide synthetase, C domain VAPA_1c28620 PF02844 Phosphoribosylglycinamide synthetase, N domain VAPA_1c28620 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain VAPA_1c28630 PF01709 Transcriptional regulator VAPA_1c28640 PF01209 ubiE/COQ5 methyltransferase family VAPA_1c28750 PF07977 FabA-like domain VAPA_1c28780 PF05872 Bacterial protein of unknown function (DUF853) VAPA_1c28790 PF06532 Negative regulator of sigma F VAPA_1c28800 PF04542 Sigma-70 region 2 VAPA_1c28800 PF08281 Sigma-70, region 4 VAPA_1c28860 PF02608 ABC transporter substrate-binding protein PnrA-like VAPA_1c28870 PF01048 Phosphorylase superfamily VAPA_1c28920 PF07969 Amidohydrolase family VAPA_1c28930 PF00512 His Kinase A (phospho-acceptor) domain VAPA_1c28930 PF00672 HAMP domain VAPA_1c28930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAPA_1c28940 PF00486 Transcriptional regulatory protein, C terminal VAPA_1c28940 PF00072 Response regulator receiver domain VAPA_1c28970 PF04116 Fatty acid hydroxylase superfamily VAPA_1c28990 PF08411 Exonuclease C-terminal VAPA_1c28990 PF00929 Exonuclease VAPA_1c29000 PF13396 Phospholipase_D-nuclease N-terminal VAPA_1c29000 PF13091 PLD-like domain VAPA_1c29010 PF17871 AAA lid domain VAPA_1c29010 PF10431 C-terminal, D2-small domain, of ClpB protein VAPA_1c29010 PF00004 ATPase family associated with various cellular activities (AAA) VAPA_1c29010 PF07724 AAA domain (Cdc48 subfamily) VAPA_1c29010 PF02861 Clp amino terminal domain, pathogenicity island component VAPA_1c29020 PF02617 ATP-dependent Clp protease adaptor protein ClpS VAPA_1c29030 PF00180 Isocitrate/isopropylmalate dehydrogenase VAPA_1c29070 PF02777 Iron/manganese superoxide dismutases, C-terminal domain VAPA_1c29070 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain VAPA_1c29080 PF13742 OB-fold nucleic acid binding domain VAPA_1c29080 PF02601 Exonuclease VII, large subunit VAPA_1c29090 PF01618 MotA/TolQ/ExbB proton channel family VAPA_1c29100 PF02472 Biopolymer transport protein ExbD/TolR VAPA_1c29110 PF02606 Tetraacyldisaccharide-1-P 4'-kinase VAPA_1c29120 PF03966 Trm112p-like protein VAPA_1c29130 PF02348 Cytidylyltransferase VAPA_1c29140 PF05191 Adenylate kinase, active site lid VAPA_1c29150 PF17763 Glutaminase/Asparaginase C-terminal domain VAPA_1c29150 PF00710 Asparaginase, N-terminal VAPA_1c29160 PF00717 Peptidase S24-like VAPA_1c29160 PF01726 LexA DNA binding domain VAPA_1c29180 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VAPA_1c29180 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VAPA_1c29190 PF07690 Major Facilitator Superfamily VAPA_1c29200 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain VAPA_1c29200 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain VAPA_1c29200 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain VAPA_1c29210 PF00378 Enoyl-CoA hydratase/isomerase VAPA_1c29220 PF00027 Cyclic nucleotide-binding domain VAPA_1c29220 PF13545 Crp-like helix-turn-helix domain VAPA_1c29240 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VAPA_1c29240 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VAPA_1c29240 PF02770 Acyl-CoA dehydrogenase, middle domain VAPA_1c29260 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain VAPA_1c29260 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III VAPA_1c29260 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I VAPA_1c29260 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II VAPA_1c29270 PF00809 Pterin binding enzyme VAPA_1c29280 PF17862 AAA+ lid domain VAPA_1c29280 PF00004 ATPase family associated with various cellular activities (AAA) VAPA_1c29280 PF06480 FtsH Extracellular VAPA_1c29280 PF01434 Peptidase family M41 VAPA_1c29290 PF01728 FtsJ-like methyltransferase VAPA_1c29300 PF01985 CRS1 / YhbY (CRM) domain VAPA_1c29330 PF03449 Transcription elongation factor, N-terminal VAPA_1c29330 PF01272 Transcription elongation factor, GreA/GreB, C-term VAPA_1c29350 PF02142 MGS-like domain VAPA_1c29350 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain VAPA_1c29350 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain VAPA_1c29370 PF00117 Glutamine amidotransferase class-I VAPA_1c29370 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain VAPA_1c29380 PF08032 RNA 2'-O ribose methyltransferase substrate binding VAPA_1c29380 PF00588 SpoU rRNA Methylase family VAPA_1c29390 PF01351 Ribonuclease HII VAPA_1c29400 PF02684 Lipid-A-disaccharide synthetase VAPA_1c29410 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 VAPA_1c29410 PF00132 Bacterial transferase hexapeptide (six repeats) VAPA_1c29420 PF07977 FabA-like domain VAPA_1c29430 PF00132 Bacterial transferase hexapeptide (six repeats) VAPA_1c29430 PF14602 Hexapeptide repeat of succinyl-transferase VAPA_1c29430 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD VAPA_1c29450 PF01103 Surface antigen VAPA_1c29450 PF07244 Surface antigen variable number repeat VAPA_1c29460 PF17820 PDZ domain VAPA_1c29460 PF02163 Peptidase family M50 VAPA_1c29470 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase VAPA_1c29470 PF13288 DXP reductoisomerase C-terminal domain VAPA_1c29470 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain VAPA_1c29490 PF01255 Putative undecaprenyl diphosphate synthase VAPA_1c29500 PF01765 Ribosome recycling factor VAPA_1c29510 PF00696 Amino acid kinase family VAPA_1c29520 PF00889 Elongation factor TS VAPA_1c29530 PF00318 Ribosomal protein S2 VAPA_1c29540 PF01425 Amidase VAPA_1c29550 PF01266 FAD dependent oxidoreductase VAPA_1c29560 PF03853 YjeF-related protein N-terminus VAPA_1c29560 PF01256 Carbohydrate kinase VAPA_1c29580 PF08206 Ribonuclease B OB domain VAPA_1c29580 PF00773 RNB domain VAPA_1c29580 PF08461 Ribonuclease R winged-helix domain VAPA_1c29580 PF00575 S1 RNA binding domain VAPA_1c29580 PF17876 Cold shock domain VAPA_1c29600 PF06803 Protein of unknown function (DUF1232) VAPA_1c29630 PF18693 TRAM domain VAPA_1c29630 PF00919 Uncharacterized protein family UPF0004 VAPA_1c29630 PF04055 Radical SAM superfamily VAPA_1c29640 PF05233 PHB accumulation regulatory domain VAPA_1c29640 PF07879 PHB/PHA accumulation regulator DNA-binding domain VAPA_1c29670 PF04607 Region found in RelA / SpoT proteins VAPA_1c29670 PF02824 TGS domain VAPA_1c29670 PF13291 ACT domain VAPA_1c29690 PF00106 short chain dehydrogenase VAPA_1c29720 PF00486 Transcriptional regulatory protein, C terminal VAPA_1c29720 PF00072 Response regulator receiver domain VAPA_1c29730 PF00672 HAMP domain VAPA_1c29730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAPA_1c29730 PF00512 His Kinase A (phospho-acceptor) domain VAPA_1c29740 PF02542 YgbB family VAPA_1c29740 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase VAPA_1c29750 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase VAPA_1c29750 PF02542 YgbB family VAPA_1c29760 PF17757 UvrB interaction domain VAPA_1c29760 PF03461 TRCF domain VAPA_1c29760 PF00270 DEAD/DEAH box helicase VAPA_1c29760 PF00271 Helicase conserved C-terminal domain VAPA_1c29760 PF02559 CarD-like/TRCF domain VAPA_1c29810 PF00155 Aminotransferase class I and II VAPA_1c29820 PF00730 HhH-GPD superfamily base excision DNA repair protein VAPA_1c29820 PF00633 Helix-hairpin-helix motif VAPA_1c29820 PF10576 Iron-sulfur binding domain of endonuclease III VAPA_1c29860 PF02654 Cobalamin-5-phosphate synthase VAPA_1c29870 PF02277 Phosphoribosyltransferase VAPA_1c29880 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain VAPA_1c29880 PF07685 CobB/CobQ-like glutamine amidotransferase domain VAPA_1c29890 PF02321 Outer membrane efflux protein VAPA_1c29900 PF00873 AcrB/AcrD/AcrF family VAPA_1c29910 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VAPA_1c29920 PF07859 alpha/beta hydrolase fold VAPA_1c29930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c29930 PF03466 LysR substrate binding domain VAPA_1c29960 PF03788 LrgA family VAPA_1c29970 PF00155 Aminotransferase class I and II VAPA_1c29980 PF03186 CobD/Cbib protein VAPA_1c29990 PF12557 Cob(I)alamin adenosyltransferase N terminal VAPA_1c29990 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP VAPA_1c30000 PF00005 ABC transporter VAPA_1c30010 PF01032 FecCD transport family VAPA_1c30030 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase VAPA_1c30040 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain VAPA_1c30040 PF07685 CobB/CobQ-like glutamine amidotransferase domain VAPA_1c30050 PF07715 TonB-dependent Receptor Plug Domain VAPA_1c30050 PF00593 TonB dependent receptor VAPA_1c30080 PF01925 Sulfite exporter TauE/SafE VAPA_1c30100 PF02311 AraC-like ligand binding domain VAPA_1c30100 PF12833 Helix-turn-helix domain VAPA_1c30110 PF00795 Carbon-nitrogen hydrolase VAPA_1c30140 PF13193 AMP-binding enzyme C-terminal domain VAPA_1c30140 PF00501 AMP-binding enzyme VAPA_1c30150 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_1c30170 PF00392 Bacterial regulatory proteins, gntR family VAPA_1c30170 PF07729 FCD domain VAPA_1c30180 PF01790 Prolipoprotein diacylglyceryl transferase VAPA_1c30210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c30210 PF03466 LysR substrate binding domain VAPA_1c30220 PF03466 LysR substrate binding domain VAPA_1c30220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c30230 PF00920 Dehydratase family VAPA_1c30250 PF00034 Cytochrome c VAPA_1c30270 PF00501 AMP-binding enzyme VAPA_1c30270 PF13193 AMP-binding enzyme C-terminal domain VAPA_1c30270 PF16177 Acetyl-coenzyme A synthetase N-terminus VAPA_1c30280 PF03350 Uncharacterized protein family, UPF0114 VAPA_1c30290 PF03466 LysR substrate binding domain VAPA_1c30290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c30300 PF13460 NAD(P)H-binding VAPA_1c30310 PF00206 Lyase VAPA_1c30310 PF10415 Fumarase C C-terminus VAPA_1c30320 PF00005 ABC transporter VAPA_1c30320 PF00571 CBS domain VAPA_1c30330 PF00528 Binding-protein-dependent transport system inner membrane component VAPA_1c30340 PF04069 Substrate binding domain of ABC-type glycine betaine transport system VAPA_1c30360 PF01177 Asp/Glu/Hydantoin racemase VAPA_1c30430 PF05362 Lon protease (S16) C-terminal proteolytic domain VAPA_1c30430 PF02190 ATP-dependent protease La (LON) substrate-binding domain VAPA_1c30430 PF00004 ATPase family associated with various cellular activities (AAA) VAPA_1c30440 PF07724 AAA domain (Cdc48 subfamily) VAPA_1c30440 PF10431 C-terminal, D2-small domain, of ClpB protein VAPA_1c30440 PF06689 ClpX C4-type zinc finger VAPA_1c30450 PF00574 Clp protease VAPA_1c30460 PF05697 Bacterial trigger factor protein (TF) VAPA_1c30460 PF05698 Bacterial trigger factor protein (TF) C-terminus VAPA_1c30460 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VAPA_1c30480 PF00873 AcrB/AcrD/AcrF family VAPA_1c30490 PF13533 Biotin-lipoyl like VAPA_1c30530 PF01593 Flavin containing amine oxidoreductase VAPA_1c30560 PF13419 Haloacid dehalogenase-like hydrolase VAPA_1c30570 PF00762 Ferrochelatase VAPA_1c30620 PF00005 ABC transporter VAPA_1c30630 PF09383 NIL domain VAPA_1c30630 PF00005 ABC transporter VAPA_1c30640 PF10503 Esterase PHB depolymerase VAPA_1c30670 PF00072 Response regulator receiver domain VAPA_1c30670 PF02954 Bacterial regulatory protein, Fis family VAPA_1c30670 PF00158 Sigma-54 interaction domain VAPA_1c30690 PF02321 Outer membrane efflux protein VAPA_1c30710 PF00873 AcrB/AcrD/AcrF family VAPA_1c30730 PF01970 Tripartite tricarboxylate transporter TctA family VAPA_1c30750 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_1c30760 PF00486 Transcriptional regulatory protein, C terminal VAPA_1c30760 PF00072 Response regulator receiver domain VAPA_1c30770 PF08521 Two-component sensor kinase N-terminal VAPA_1c30770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAPA_1c30770 PF00512 His Kinase A (phospho-acceptor) domain VAPA_1c30780 PF01479 S4 domain VAPA_1c30790 PF03976 Polyphosphate kinase 2 (PPK2) VAPA_1c30810 PF00664 ABC transporter transmembrane region VAPA_1c30810 PF00005 ABC transporter VAPA_1c30840 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region VAPA_1c30840 PF00037 4Fe-4S binding domain VAPA_1c30840 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit VAPA_1c30850 PF12838 4Fe-4S dicluster domain VAPA_1c30850 PF04879 Molybdopterin oxidoreductase Fe4S4 domain VAPA_1c30850 PF00384 Molybdopterin oxidoreductase VAPA_1c30850 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region VAPA_1c30850 PF01568 Molydopterin dinucleotide binding domain VAPA_1c30860 PF02634 FdhD/NarQ family VAPA_1c30880 PF01116 Fructose-bisphosphate aldolase class-II VAPA_1c30890 PF00162 Phosphoglycerate kinase VAPA_1c30900 PF02779 Transketolase, pyrimidine binding domain VAPA_1c30900 PF02780 Transketolase, C-terminal domain VAPA_1c30900 PF00456 Transketolase, thiamine diphosphate binding domain VAPA_1c30910 PF00485 Phosphoribulokinase / Uridine kinase family VAPA_1c30920 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain VAPA_1c30930 PF13419 Haloacid dehalogenase-like hydrolase VAPA_1c30950 PF13419 Haloacid dehalogenase-like hydrolase VAPA_1c30960 PF17866 AAA lid domain VAPA_1c30960 PF00004 ATPase family associated with various cellular activities (AAA) VAPA_1c30970 PF00101 Ribulose bisphosphate carboxylase, small chain VAPA_1c30980 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain VAPA_1c30980 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain VAPA_1c30990 PF03466 LysR substrate binding domain VAPA_1c30990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c31010 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_1c31050 PF00005 ABC transporter VAPA_1c31060 PF13360 PQQ-like domain VAPA_1c31070 PF13442 Cytochrome C oxidase, cbb3-type, subunit III VAPA_1c31130 PF17863 AAA lid domain VAPA_1c31130 PF07726 ATPase family associated with various cellular activities (AAA) VAPA_1c31190 PF13186 Iron-sulfur cluster-binding domain VAPA_1c31190 PF04055 Radical SAM superfamily VAPA_1c31200 PF05402 Coenzyme PQQ synthesis protein D (PqqD) VAPA_1c31210 PF03070 TENA/THI-4/PQQC family VAPA_1c31220 PF12706 Beta-lactamase superfamily domain VAPA_1c31230 PF00561 alpha/beta hydrolase fold VAPA_1c31240 PF07730 Histidine kinase VAPA_1c31240 PF05231 MASE1 VAPA_1c31240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAPA_1c31250 PF00196 Bacterial regulatory proteins, luxR family VAPA_1c31250 PF00072 Response regulator receiver domain VAPA_1c31270 PF00117 Glutamine amidotransferase class-I VAPA_1c31270 PF04715 Anthranilate synthase component I, N terminal region VAPA_1c31270 PF00425 chorismate binding enzyme VAPA_1c31300 PF02741 FTR, proximal lobe VAPA_1c31300 PF01913 Formylmethanofuran-tetrahydromethanopterin formyltransferase VAPA_1c31310 PF07969 Amidohydrolase family VAPA_1c31370 PF04476 4-HFC-P synthase VAPA_1c31410 PF02954 Bacterial regulatory protein, Fis family VAPA_1c31410 PF01590 GAF domain VAPA_1c31410 PF00158 Sigma-54 interaction domain VAPA_1c31430 PF08714 Formaldehyde-activating enzyme (Fae) VAPA_1c31460 PF02289 Cyclohydrolase (MCH) VAPA_1c31480 PF09176 Methylene-tetrahydromethanopterin dehydrogenase, N-terminal VAPA_1c31540 PF13840 ACT domain VAPA_1c31540 PF01842 ACT domain VAPA_1c31540 PF00696 Amino acid kinase family VAPA_1c31550 PF09179 TilS substrate binding domain VAPA_1c31550 PF01171 PP-loop family VAPA_1c31560 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit VAPA_1c31570 PF00730 HhH-GPD superfamily base excision DNA repair protein VAPA_1c31570 PF06029 AlkA N-terminal domain VAPA_1c31570 PF02805 Metal binding domain of Ada VAPA_1c31570 PF12833 Helix-turn-helix domain VAPA_1c31580 PF01406 tRNA synthetases class I (C) catalytic domain VAPA_1c31580 PF09190 DALR domain VAPA_1c31600 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD VAPA_1c31610 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD VAPA_1c31620 PF00149 Calcineurin-like phosphoesterase VAPA_1c31630 PF06167 Glucose-regulated metallo-peptidase M90 VAPA_1c31670 PF01464 Transglycosylase SLT domain VAPA_1c31670 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain VAPA_1c31680 PF00464 Serine hydroxymethyltransferase VAPA_1c31690 PF03477 ATP cone domain VAPA_1c31750 PF07963 Prokaryotic N-terminal methylation motif VAPA_1c31750 PF00114 Pilin (bacterial filament) VAPA_1c31760 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region VAPA_1c31760 PF01872 RibD C-terminal domain VAPA_1c31770 PF00677 Lumazine binding domain VAPA_1c31780 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase VAPA_1c31780 PF00925 GTP cyclohydrolase II VAPA_1c31790 PF00885 6,7-dimethyl-8-ribityllumazine synthase VAPA_1c31800 PF01029 NusB family VAPA_1c31810 PF00155 Aminotransferase class I and II VAPA_1c31820 PF03061 Thioesterase superfamily VAPA_1c31830 PF01618 MotA/TolQ/ExbB proton channel family VAPA_1c31840 PF02472 Biopolymer transport protein ExbD/TolR VAPA_1c31860 PF01336 OB-fold nucleic acid binding domain VAPA_1c31860 PF02811 PHP domain VAPA_1c31860 PF07733 Bacterial DNA polymerase III alpha NTPase domain VAPA_1c31860 PF14579 Helix-hairpin-helix motif VAPA_1c31860 PF17657 Bacterial DNA polymerase III alpha subunit finger domain VAPA_1c31880 PF00072 Response regulator receiver domain VAPA_1c31880 PF00486 Transcriptional regulatory protein, C terminal VAPA_1c31890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAPA_1c31890 PF00512 His Kinase A (phospho-acceptor) domain VAPA_1c31910 PF01970 Tripartite tricarboxylate transporter TctA family VAPA_1c31920 PF05726 Pirin C-terminal cupin domain VAPA_1c31920 PF02678 Pirin VAPA_1c31930 PF03358 NADPH-dependent FMN reductase VAPA_1c31950 PF17954 Quercetinase C-terminal cupin domain VAPA_1c31950 PF02678 Pirin VAPA_1c31980 PF01266 FAD dependent oxidoreductase VAPA_1c31980 PF05430 S-adenosyl-L-methionine-dependent methyltransferase VAPA_1c31990 PF00749 tRNA synthetases class I (E and Q), catalytic domain VAPA_1c32000 PF02390 Putative methyltransferase VAPA_1c32020 PF13545 Crp-like helix-turn-helix domain VAPA_1c32020 PF00027 Cyclic nucleotide-binding domain VAPA_1c32040 PF00596 Class II Aldolase and Adducin N-terminal domain VAPA_1c32050 PF03466 LysR substrate binding domain VAPA_1c32050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c32060 PF04205 FMN-binding domain VAPA_1c32060 PF03358 NADPH-dependent FMN reductase VAPA_1c32060 PF00890 FAD binding domain VAPA_1c32080 PF00596 Class II Aldolase and Adducin N-terminal domain VAPA_1c32090 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_1c32100 PF04909 Amidohydrolase VAPA_1c32110 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_1c32120 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VAPA_1c32120 PF01842 ACT domain VAPA_1c32120 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VAPA_1c32130 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_1c32140 PF14310 Fibronectin type III-like domain VAPA_1c32140 PF00933 Glycosyl hydrolase family 3 N terminal domain VAPA_1c32140 PF01915 Glycosyl hydrolase family 3 C-terminal domain VAPA_1c32150 PF13018 Extended Signal Peptide of Type V secretion system VAPA_1c32150 PF05662 Coiled stalk of trimeric autotransporter adhesin VAPA_1c32150 PF05658 Head domain of trimeric autotransporter adhesin VAPA_1c32150 PF03895 YadA-like membrane anchor domain VAPA_1c32160 PF05506 Domain of unknown function (DUF756) VAPA_1c32160 PF04185 Phosphoesterase family VAPA_1c32170 PF00528 Binding-protein-dependent transport system inner membrane component VAPA_1c32180 PF00005 ABC transporter VAPA_1c32200 PF13344 Haloacid dehalogenase-like hydrolase VAPA_1c32210 PF01380 SIS domain VAPA_1c32210 PF01418 Helix-turn-helix domain, rpiR family VAPA_1c32270 PF03069 Acetamidase/Formamidase family VAPA_1c32280 PF00005 ABC transporter VAPA_1c32290 PF08402 TOBE domain VAPA_1c32290 PF00005 ABC transporter VAPA_1c32330 PF00512 His Kinase A (phospho-acceptor) domain VAPA_1c32330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAPA_1c32330 PF00072 Response regulator receiver domain VAPA_1c32330 PF01627 Hpt domain VAPA_1c32340 PF00072 Response regulator receiver domain VAPA_1c32370 PF00512 His Kinase A (phospho-acceptor) domain VAPA_1c32370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAPA_1c32370 PF01590 GAF domain VAPA_1c32370 PF08446 PAS fold VAPA_1c32370 PF00360 Phytochrome region VAPA_1c32400 PF12833 Helix-turn-helix domain VAPA_1c32440 PF01433 Peptidase family M1 domain VAPA_1c32440 PF11838 ERAP1-like C-terminal domain VAPA_1c32450 PF13609 Gram-negative porin VAPA_1c32470 PF00355 Rieske [2Fe-2S] domain VAPA_1c32490 PF01494 FAD binding domain VAPA_1c32500 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_1c32520 PF00171 Aldehyde dehydrogenase family VAPA_1c32530 PF01958 Domain of unknown function DUF108 VAPA_1c32530 PF03447 Homoserine dehydrogenase, NAD binding domain VAPA_1c32540 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VAPA_1c32540 PF00205 Thiamine pyrophosphate enzyme, central domain VAPA_1c32540 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VAPA_1c32560 PF09339 IclR helix-turn-helix domain VAPA_1c32560 PF01614 Bacterial transcriptional regulator VAPA_1c32570 PF00561 alpha/beta hydrolase fold VAPA_1c32600 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_1c32610 PF01266 FAD dependent oxidoreductase VAPA_1c32620 PF02558 Ketopantoate reductase PanE/ApbA VAPA_1c32620 PF08546 Ketopantoate reductase PanE/ApbA C terminal VAPA_1c32630 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain VAPA_1c32630 PF01411 tRNA synthetases class II (A) VAPA_1c32630 PF02272 DHHA1 domain VAPA_1c32650 PF06100 MCRA family VAPA_1c32830 PF00202 Aminotransferase class-III VAPA_1c32830 PF00668 Condensation domain VAPA_1c32830 PF00501 AMP-binding enzyme VAPA_1c32830 PF16197 Ketoacyl-synthetase C-terminal extension VAPA_1c32830 PF00109 Beta-ketoacyl synthase, N-terminal domain VAPA_1c32830 PF02801 Beta-ketoacyl synthase, C-terminal domain VAPA_1c32830 PF13193 AMP-binding enzyme C-terminal domain VAPA_1c32830 PF00550 Phosphopantetheine attachment site VAPA_1c32840 PF00668 Condensation domain VAPA_1c32840 PF00550 Phosphopantetheine attachment site VAPA_1c32840 PF13193 AMP-binding enzyme C-terminal domain VAPA_1c32840 PF00501 AMP-binding enzyme VAPA_1c32840 PF00975 Thioesterase domain VAPA_1c32880 PF02563 Polysaccharide biosynthesis/export protein VAPA_1c32880 PF10531 SLBB domain VAPA_1c32890 PF13807 G-rich domain on putative tyrosine kinase VAPA_1c32890 PF13614 AAA domain VAPA_1c32890 PF02706 Chain length determinant protein VAPA_1c32900 PF02397 Bacterial sugar transferase VAPA_1c32910 PF01370 NAD dependent epimerase/dehydratase family VAPA_1c32970 PF00534 Glycosyl transferases group 1 VAPA_1c32970 PF13579 Glycosyl transferase 4-like domain VAPA_1c32980 PF00196 Bacterial regulatory proteins, luxR family VAPA_1c32980 PF00072 Response regulator receiver domain VAPA_1c32990 PF01050 Mannose-6-phosphate isomerase VAPA_1c32990 PF00483 Nucleotidyl transferase VAPA_1c33040 PF14579 Helix-hairpin-helix motif VAPA_1c33040 PF17657 Bacterial DNA polymerase III alpha subunit finger domain VAPA_1c33040 PF07733 Bacterial DNA polymerase III alpha NTPase domain VAPA_1c33040 PF02811 PHP domain VAPA_1c33080 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_1c33090 PF13609 Gram-negative porin VAPA_1c33150 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_1c33160 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_1c33170 PF12697 Alpha/beta hydrolase family VAPA_1c33180 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase VAPA_1c33190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c33190 PF03466 LysR substrate binding domain VAPA_1c33200 PF00005 ABC transporter VAPA_1c33200 PF00664 ABC transporter transmembrane region VAPA_1c33220 PF17932 Tetracyclin repressor-like, C-terminal domain VAPA_1c33220 PF00440 Bacterial regulatory proteins, tetR family VAPA_1c33250 PF01926 50S ribosome-binding GTPase VAPA_1c33250 PF12631 MnmE helical domain VAPA_1c33250 PF10396 GTP-binding protein TrmE N-terminus VAPA_1c33270 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain VAPA_1c33270 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase VAPA_1c33280 PF03450 CO dehydrogenase flavoprotein C-terminal domain VAPA_1c33280 PF00941 FAD binding domain in molybdopterin dehydrogenase VAPA_1c33290 PF01799 [2Fe-2S] binding domain VAPA_1c33290 PF10518 TAT (twin-arginine translocation) pathway signal sequence VAPA_1c33290 PF00111 2Fe-2S iron-sulfur cluster binding domain VAPA_1c33310 PF03466 LysR substrate binding domain VAPA_1c33310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c33320 PF03006 Haemolysin-III related VAPA_1c33340 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) VAPA_1c33360 PF01022 Bacterial regulatory protein, arsR family VAPA_1c33380 PF01066 CDP-alcohol phosphatidyltransferase VAPA_1c33390 PF00043 Glutathione S-transferase, C-terminal domain VAPA_1c33390 PF02798 Glutathione S-transferase, N-terminal domain VAPA_1c33400 PF00106 short chain dehydrogenase VAPA_1c33400 PF00300 Histidine phosphatase superfamily (branch 1) VAPA_1c33410 PF00226 DnaJ domain VAPA_1c33410 PF01556 DnaJ C terminal domain VAPA_1c33440 PF13677 Membrane MotB of proton-channel complex MotA/MotB VAPA_1c33440 PF00691 OmpA family VAPA_1c33500 PF03352 Methyladenine glycosylase VAPA_1c33520 PF03972 MmgE/PrpD family VAPA_1c33530 PF00285 Citrate synthase, C-terminal domain VAPA_1c33550 PF09856 Predicted transcriptional regulator (DUF2083) VAPA_1c33550 PF06114 IrrE N-terminal-like domain VAPA_1c33550 PF01381 Helix-turn-helix VAPA_1c33570 PF08267 Cobalamin-independent synthase, N-terminal domain VAPA_1c33570 PF01717 Cobalamin-independent synthase, Catalytic domain VAPA_1c33580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c33580 PF03466 LysR substrate binding domain VAPA_1c33590 PF03466 LysR substrate binding domain VAPA_1c33590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c33620 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase VAPA_1c33620 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase VAPA_1c33630 PF00378 Enoyl-CoA hydratase/isomerase VAPA_1c33640 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VAPA_1c33640 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VAPA_1c33640 PF02770 Acyl-CoA dehydrogenase, middle domain VAPA_1c33660 PF00171 Aldehyde dehydrogenase family VAPA_1c33670 PF03466 LysR substrate binding domain VAPA_1c33670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c33690 PF02515 CoA-transferase family III VAPA_1c33700 PF01144 Coenzyme A transferase VAPA_1c33710 PF01144 Coenzyme A transferase VAPA_1c33720 PF00072 Response regulator receiver domain VAPA_1c33720 PF00196 Bacterial regulatory proteins, luxR family VAPA_1c33740 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_1c33750 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VAPA_1c33760 PF00682 HMGL-like VAPA_1c33770 PF02515 CoA-transferase family III VAPA_1c33780 PF03466 LysR substrate binding domain VAPA_1c33780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c33790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c33790 PF03466 LysR substrate binding domain VAPA_1c33800 PF00171 Aldehyde dehydrogenase family VAPA_1c33820 PF04349 Periplasmic glucan biosynthesis protein, MdoG VAPA_1c33830 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase VAPA_1c33830 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VAPA_1c33840 PF13520 Amino acid permease VAPA_1c33850 PF06751 Ethanolamine ammonia lyase large subunit (EutB) VAPA_1c33860 PF05985 Ethanolamine ammonia-lyase light chain (EutC) VAPA_1c33910 PF00884 Sulfatase VAPA_1c33910 PF08019 Phosphoethanolamine transferase EptA/EptB VAPA_1c33920 PF01569 PAP2 superfamily VAPA_1c33940 PF00072 Response regulator receiver domain VAPA_1c33940 PF00486 Transcriptional regulatory protein, C terminal VAPA_1c33950 PF00512 His Kinase A (phospho-acceptor) domain VAPA_1c33950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAPA_1c33950 PF08521 Two-component sensor kinase N-terminal VAPA_1c33960 PF03061 Thioesterase superfamily VAPA_1c33990 PF05378 Hydantoinase/oxoprolinase N-terminal region VAPA_1c33990 PF01968 Hydantoinase/oxoprolinase VAPA_1c34010 PF07286 Protein of unknown function (DUF1445) VAPA_1c34020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c34020 PF03466 LysR substrate binding domain VAPA_1c34030 PF01370 NAD dependent epimerase/dehydratase family VAPA_1c34040 PF03480 Bacterial extracellular solute-binding protein, family 7 VAPA_1c34060 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VAPA_1c34080 PF01571 Aminomethyltransferase folate-binding domain VAPA_1c34080 PF08669 Glycine cleavage T-protein C-terminal barrel domain VAPA_1c34090 PF01597 Glycine cleavage H-protein VAPA_1c34100 PF02347 Glycine cleavage system P-protein VAPA_1c34140 PF03060 Nitronate monooxygenase VAPA_1c34150 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase VAPA_1c34150 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase VAPA_1c34170 PF00141 Peroxidase VAPA_1c34210 PF00083 Sugar (and other) transporter VAPA_1c34210 PF07690 Major Facilitator Superfamily VAPA_1c34220 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VAPA_1c34230 PF00561 alpha/beta hydrolase fold VAPA_1c34240 PF07690 Major Facilitator Superfamily VAPA_1c34260 PF10397 Adenylosuccinate lyase C-terminus VAPA_1c34260 PF00206 Lyase VAPA_1c34270 PF01488 Shikimate / quinate 5-dehydrogenase VAPA_1c34270 PF18317 Shikimate 5'-dehydrogenase C-terminal domain VAPA_1c34270 PF08501 Shikimate dehydrogenase substrate binding domain VAPA_1c34280 PF03480 Bacterial extracellular solute-binding protein, family 7 VAPA_1c34290 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VAPA_1c34300 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component VAPA_1c34310 PF08501 Shikimate dehydrogenase substrate binding domain VAPA_1c34310 PF18317 Shikimate 5'-dehydrogenase C-terminal domain VAPA_1c34310 PF01488 Shikimate / quinate 5-dehydrogenase VAPA_1c34320 PF09339 IclR helix-turn-helix domain VAPA_1c34320 PF01614 Bacterial transcriptional regulator VAPA_1c34330 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_1c34340 PF00072 Response regulator receiver domain VAPA_1c34340 PF00486 Transcriptional regulatory protein, C terminal VAPA_1c34350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAPA_1c34350 PF00512 His Kinase A (phospho-acceptor) domain VAPA_1c34380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c34380 PF03466 LysR substrate binding domain VAPA_1c34410 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_1c34450 PF13407 Periplasmic binding protein domain VAPA_1c34470 PF00149 Calcineurin-like phosphoesterase VAPA_1c34490 PF01264 Chorismate synthase VAPA_1c34520 PF01022 Bacterial regulatory protein, arsR family VAPA_1c34540 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain VAPA_1c34540 PF13378 Enolase C-terminal domain-like VAPA_1c34550 PF07690 Major Facilitator Superfamily VAPA_1c34570 PF01557 Fumarylacetoacetate (FAA) hydrolase family VAPA_1c34600 PF08173 Membrane bound YbgT-like protein VAPA_1c34610 PF02322 Cytochrome bd terminal oxidase subunit II VAPA_1c34620 PF01654 Cytochrome bd terminal oxidase subunit I VAPA_1c34630 PF00664 ABC transporter transmembrane region VAPA_1c34630 PF00005 ABC transporter VAPA_1c34640 PF00005 ABC transporter VAPA_1c34640 PF00664 ABC transporter transmembrane region VAPA_1c34670 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VAPA_1c34670 PF12806 Acetyl-CoA dehydrogenase C-terminal like VAPA_1c34670 PF02770 Acyl-CoA dehydrogenase, middle domain VAPA_1c34670 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VAPA_1c34680 PF01012 Electron transfer flavoprotein domain VAPA_1c34680 PF00766 Electron transfer flavoprotein FAD-binding domain VAPA_1c34690 PF01012 Electron transfer flavoprotein domain VAPA_1c34700 PF12795 Mechanosensitive ion channel porin domain VAPA_1c34700 PF00924 Mechanosensitive ion channel VAPA_1c34700 PF12794 Mechanosensitive ion channel inner membrane domain 1 VAPA_1c34710 PF00850 Histone deacetylase domain VAPA_1c34720 PF07726 ATPase family associated with various cellular activities (AAA) VAPA_1c34720 PF17863 AAA lid domain VAPA_1c34740 PF01841 Transglutaminase-like superfamily VAPA_1c34740 PF11992 Domain of unknown function (DUF3488) VAPA_1c34740 PF13559 Domain of unknown function (DUF4129) VAPA_1c34750 PF13406 Transglycosylase SLT domain VAPA_1c34780 PF00109 Beta-ketoacyl synthase, N-terminal domain VAPA_1c34780 PF02801 Beta-ketoacyl synthase, C-terminal domain VAPA_1c34810 PF00005 ABC transporter VAPA_1c34880 PF00528 Binding-protein-dependent transport system inner membrane component VAPA_1c34890 PF00528 Binding-protein-dependent transport system inner membrane component VAPA_1c34900 PF17912 MalK OB fold domain VAPA_1c34900 PF00005 ABC transporter VAPA_1c34910 PF00005 ABC transporter VAPA_1c34910 PF17912 MalK OB fold domain VAPA_1c34910 PF03459 TOBE domain VAPA_1c34920 PF01266 FAD dependent oxidoreductase VAPA_1c34920 PF16901 C-terminal domain of alpha-glycerophosphate oxidase VAPA_1c34930 PF00455 DeoR C terminal sensor domain VAPA_1c34930 PF08220 DeoR-like helix-turn-helix domain VAPA_1c34950 PF00370 FGGY family of carbohydrate kinases, N-terminal domain VAPA_1c34950 PF02782 FGGY family of carbohydrate kinases, C-terminal domain VAPA_1c34990 PF14403 Circularly permuted ATP-grasp type 2 VAPA_1c35000 PF03772 Competence protein VAPA_1c35000 PF00753 Metallo-beta-lactamase superfamily VAPA_1c35020 PF14403 Circularly permuted ATP-grasp type 2 VAPA_1c35020 PF04168 A predicted alpha-helical domain with a conserved ER motif. VAPA_1c35030 PF01841 Transglutaminase-like superfamily VAPA_1c35030 PF08379 Bacterial transglutaminase-like N-terminal region VAPA_1c35050 PF07730 Histidine kinase VAPA_1c35050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAPA_1c35050 PF00672 HAMP domain VAPA_1c35060 PF00196 Bacterial regulatory proteins, luxR family VAPA_1c35060 PF00072 Response regulator receiver domain VAPA_1c35070 PF00135 Carboxylesterase family VAPA_1c35110 PF03466 LysR substrate binding domain VAPA_1c35110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c35120 PF00037 4Fe-4S binding domain VAPA_1c35130 PF00378 Enoyl-CoA hydratase/isomerase VAPA_1c35140 PF02515 CoA-transferase family III VAPA_1c35160 PF00528 Binding-protein-dependent transport system inner membrane component VAPA_1c35170 PF00005 ABC transporter VAPA_1c35190 PF00356 Bacterial regulatory proteins, lacI family VAPA_1c35200 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VAPA_1c35200 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VAPA_1c35210 PF00294 pfkB family carbohydrate kinase VAPA_1c35230 PF00005 ABC transporter VAPA_1c35250 PF00528 Binding-protein-dependent transport system inner membrane component VAPA_1c35260 PF00528 Binding-protein-dependent transport system inner membrane component VAPA_1c35300 PF12706 Beta-lactamase superfamily domain VAPA_1c35320 PF00521 DNA gyrase/topoisomerase IV, subunit A VAPA_1c35340 PF10145 Phage-related minor tail protein VAPA_1c35340 PF01551 Peptidase family M23 VAPA_1c35340 PF01464 Transglycosylase SLT domain VAPA_1c35350 PF01751 Toprim domain VAPA_1c35350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAPA_1c35350 PF00986 DNA gyrase B subunit, carboxyl terminus VAPA_1c35350 PF00204 DNA gyrase B VAPA_1c35390 PF00701 Dihydrodipicolinate synthetase family VAPA_1c35400 PF06804 NlpB/DapX lipoprotein VAPA_1c35410 PF00753 Metallo-beta-lactamase superfamily VAPA_1c35440 PF08007 Cupin superfamily protein VAPA_1c35450 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VAPA_1c35470 PF00692 dUTPase VAPA_1c35490 PF04127 DNA / pantothenate metabolism flavoprotein VAPA_1c35490 PF02441 Flavoprotein VAPA_1c35500 PF00117 Glutamine amidotransferase class-I VAPA_1c35500 PF06418 CTP synthase N-terminus VAPA_1c35510 PF00793 DAHP synthetase I family VAPA_1c35530 PF00113 Enolase, C-terminal TIM barrel domain VAPA_1c35530 PF03952 Enolase, N-terminal domain VAPA_1c35540 PF04977 Septum formation initiator VAPA_1c35550 PF04973 Nicotinamide mononucleotide transporter VAPA_1c35580 PF01430 Hsp33 protein VAPA_1c35590 PF00132 Bacterial transferase hexapeptide (six repeats) VAPA_1c35600 PF04305 Protein of unknown function (DUF455) VAPA_1c35620 PF02803 Thiolase, C-terminal domain VAPA_1c35620 PF00108 Thiolase, N-terminal domain VAPA_1c35640 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_1c35650 PF02899 Phage integrase, N-terminal SAM-like domain VAPA_1c35650 PF00589 Phage integrase family VAPA_1c35660 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_1c35680 PF08331 Domain of unknown function (DUF1730) VAPA_1c35690 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE VAPA_1c35700 PF11741 AMIN domain VAPA_1c35700 PF01520 N-acetylmuramoyl-L-alanine amidase VAPA_1c35720 PF09335 SNARE associated Golgi protein VAPA_1c35730 PF01738 Dienelactone hydrolase family VAPA_1c35740 PF08676 MutL C terminal dimerisation domain VAPA_1c35740 PF01119 DNA mismatch repair protein, C-terminal domain VAPA_1c35770 PF00005 ABC transporter VAPA_1c35780 PF00291 Pyridoxal-phosphate dependent enzyme VAPA_1c35800 PF05721 Phytanoyl-CoA dioxygenase (PhyH) VAPA_1c35820 PF03795 YCII-related domain VAPA_1c35830 PF08281 Sigma-70, region 4 VAPA_1c35830 PF04542 Sigma-70 region 2 VAPA_1c35860 PF01804 Penicillin amidase VAPA_1c35900 PF00149 Calcineurin-like phosphoesterase VAPA_1c35920 PF02653 Branched-chain amino acid transport system / permease component VAPA_1c35940 PF00005 ABC transporter VAPA_1c35950 PF12399 Branched-chain amino acid ATP-binding cassette transporter VAPA_1c35950 PF00005 ABC transporter VAPA_1c35970 PF07690 Major Facilitator Superfamily VAPA_1c35980 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VAPA_1c35980 PF00529 HlyD membrane-fusion protein of T1SS VAPA_1c35990 PF02321 Outer membrane efflux protein VAPA_1c36000 PF01047 MarR family VAPA_1c36010 PF00005 ABC transporter VAPA_1c36010 PF00664 ABC transporter transmembrane region VAPA_1c36030 PF00293 NUDIX domain VAPA_1c36050 PF00361 Proton-conducting membrane transporter VAPA_1c36060 PF00361 Proton-conducting membrane transporter VAPA_1c36060 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus VAPA_1c36070 PF00361 Proton-conducting membrane transporter VAPA_1c36070 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus VAPA_1c36080 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L VAPA_1c36090 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 VAPA_1c36100 PF12838 4Fe-4S dicluster domain VAPA_1c36110 PF00146 NADH dehydrogenase VAPA_1c36120 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region VAPA_1c36120 PF00384 Molybdopterin oxidoreductase VAPA_1c36120 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal VAPA_1c36130 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit VAPA_1c36130 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region VAPA_1c36130 PF10531 SLBB domain VAPA_1c36150 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit VAPA_1c36160 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit VAPA_1c36170 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit VAPA_1c36180 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 VAPA_1c36200 PF03840 Preprotein translocase SecG subunit VAPA_1c36210 PF00121 Triosephosphate isomerase VAPA_1c36220 PF02801 Beta-ketoacyl synthase, C-terminal domain VAPA_1c36220 PF08659 KR domain VAPA_1c36220 PF16197 Ketoacyl-synthetase C-terminal extension VAPA_1c36220 PF00698 Acyl transferase domain VAPA_1c36220 PF00109 Beta-ketoacyl synthase, N-terminal domain VAPA_1c36220 PF00107 Zinc-binding dehydrogenase VAPA_1c36220 PF08240 Alcohol dehydrogenase GroES-like domain VAPA_1c36220 PF14765 Polyketide synthase dehydratase VAPA_1c36220 PF00550 Phosphopantetheine attachment site VAPA_1c36230 PF03725 3' exoribonuclease family, domain 2 VAPA_1c36230 PF01138 3' exoribonuclease family, domain 1 VAPA_1c36230 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain VAPA_1c36230 PF00575 S1 RNA binding domain VAPA_1c36230 PF00013 KH domain VAPA_1c36240 PF00312 Ribosomal protein S15 VAPA_1c36260 PF13458 Periplasmic binding protein VAPA_1c36290 PF00814 Glycoprotease family VAPA_1c36300 PF08376 Nitrate and nitrite sensing VAPA_1c36300 PF03861 ANTAR domain VAPA_1c36320 PF00528 Binding-protein-dependent transport system inner membrane component VAPA_1c36330 PF00005 ABC transporter VAPA_1c36340 PF03861 ANTAR domain VAPA_1c36340 PF00072 Response regulator receiver domain VAPA_1c36350 PF07690 Major Facilitator Superfamily VAPA_1c36360 PF00069 Protein kinase domain VAPA_1c36360 PF03793 PASTA domain VAPA_1c36370 PF01077 Nitrite and sulphite reductase 4Fe-4S domain VAPA_1c36370 PF18267 Rubredoxin NAD+ reductase C-terminal domain VAPA_1c36370 PF04324 BFD-like [2Fe-2S] binding domain VAPA_1c36370 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain VAPA_1c36370 PF07992 Pyridine nucleotide-disulphide oxidoreductase VAPA_1c36380 PF00355 Rieske [2Fe-2S] domain VAPA_1c36390 PF01568 Molydopterin dinucleotide binding domain VAPA_1c36390 PF00384 Molybdopterin oxidoreductase VAPA_1c36390 PF04324 BFD-like [2Fe-2S] binding domain VAPA_1c36390 PF04879 Molybdopterin oxidoreductase Fe4S4 domain VAPA_1c36400 PF00591 Glycosyl transferase family, a/b domain VAPA_1c36400 PF02885 Glycosyl transferase family, helical bundle domain VAPA_1c36410 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases VAPA_1c36430 PF03958 Bacterial type II/III secretion system short domain VAPA_1c36430 PF11741 AMIN domain VAPA_1c36430 PF07660 Secretin and TonB N terminus short domain VAPA_1c36430 PF00263 Bacterial type II and III secretion system protein VAPA_1c36440 PF17912 MalK OB fold domain VAPA_1c36440 PF00005 ABC transporter VAPA_1c36460 PF00528 Binding-protein-dependent transport system inner membrane component VAPA_1c36470 PF00528 Binding-protein-dependent transport system inner membrane component VAPA_1c36490 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family VAPA_1c36510 PF01165 Ribosomal protein S21 VAPA_1c36520 PF09424 Yqey-like protein VAPA_1c36530 PF00293 NUDIX domain VAPA_1c36600 PF00211 Adenylate and Guanylate cyclase catalytic domain VAPA_1c36600 PF13191 AAA ATPase domain VAPA_1c36620 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_1c36640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c36640 PF03466 LysR substrate binding domain VAPA_1c36650 PF12833 Helix-turn-helix domain VAPA_1c36660 PF01557 Fumarylacetoacetate (FAA) hydrolase family VAPA_1c36670 PF01523 Putative modulator of DNA gyrase VAPA_1c36680 PF04751 Protein of unknown function (DUF615) VAPA_1c36690 PF00994 Probable molybdopterin binding domain VAPA_1c36710 PF00873 AcrB/AcrD/AcrF family VAPA_1c36720 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VAPA_1c36720 PF00529 HlyD membrane-fusion protein of T1SS VAPA_1c36730 PF02321 Outer membrane efflux protein VAPA_1c36750 PF00486 Transcriptional regulatory protein, C terminal VAPA_1c36750 PF00072 Response regulator receiver domain VAPA_1c36760 PF00512 His Kinase A (phospho-acceptor) domain VAPA_1c36760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAPA_1c36760 PF00672 HAMP domain VAPA_1c36770 PF00999 Sodium/hydrogen exchanger family VAPA_1c36800 PF00403 Heavy-metal-associated domain VAPA_1c36810 PF13411 MerR HTH family regulatory protein VAPA_1c36820 PF00132 Bacterial transferase hexapeptide (six repeats) VAPA_1c36830 PF00588 SpoU rRNA Methylase family VAPA_1c36840 PF00459 Inositol monophosphatase family VAPA_1c36850 PF12805 FUSC-like inner membrane protein yccS VAPA_1c36870 PF01037 Lrp/AsnC ligand binding domain VAPA_1c36890 PF04235 Protein of unknown function (DUF418) VAPA_1c36900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c36900 PF03466 LysR substrate binding domain VAPA_1c36910 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_1c36920 PF12802 MarR family VAPA_1c36930 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_1c36940 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_1c36950 PF00884 Sulfatase VAPA_1c36970 PF00563 EAL domain VAPA_1c36970 PF00990 Diguanylate cyclase, GGDEF domain VAPA_1c36970 PF03707 Bacterial signalling protein N terminal repeat VAPA_1c37000 PF00034 Cytochrome c VAPA_1c37000 PF03150 Di-haem cytochrome c peroxidase VAPA_1c37040 PF08021 Siderophore-interacting FAD-binding domain VAPA_1c37040 PF04954 Siderophore-interacting protein VAPA_1c37050 PF01544 CorA-like Mg2+ transporter protein VAPA_1c37070 PF00488 MutS domain V VAPA_1c37070 PF05192 MutS domain III VAPA_1c37070 PF05190 MutS family domain IV VAPA_1c37070 PF05188 MutS domain II VAPA_1c37070 PF01624 MutS domain I VAPA_1c37100 PF01425 Amidase VAPA_1c37130 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VAPA_1c37130 PF00005 ABC transporter VAPA_1c37140 PF12911 N-terminal TM domain of oligopeptide transport permease C VAPA_1c37140 PF00528 Binding-protein-dependent transport system inner membrane component VAPA_1c37150 PF00528 Binding-protein-dependent transport system inner membrane component VAPA_1c37160 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VAPA_1c37170 PF00155 Aminotransferase class I and II VAPA_1c37170 PF00392 Bacterial regulatory proteins, gntR family VAPA_1c37180 PF01966 HD domain VAPA_1c37180 PF00072 Response regulator receiver domain VAPA_1c37190 PF00067 Cytochrome P450 VAPA_1c37200 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_1c37220 PF02673 Bacitracin resistance protein BacA VAPA_1c37240 PF00497 Bacterial extracellular solute-binding proteins, family 3 VAPA_1c37250 PF00202 Aminotransferase class-III VAPA_1c37260 PF01418 Helix-turn-helix domain, rpiR family VAPA_1c37260 PF01380 SIS domain VAPA_1c37280 PF02321 Outer membrane efflux protein VAPA_1c37290 PF00873 AcrB/AcrD/AcrF family VAPA_1c37300 PF00873 AcrB/AcrD/AcrF family VAPA_1c37310 PF13533 Biotin-lipoyl like VAPA_1c37340 PF00672 HAMP domain VAPA_1c37340 PF02743 Cache domain VAPA_1c37340 PF06580 Histidine kinase VAPA_1c37340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAPA_1c37350 PF04397 LytTr DNA-binding domain VAPA_1c37350 PF00072 Response regulator receiver domain VAPA_1c37370 PF00749 tRNA synthetases class I (E and Q), catalytic domain VAPA_1c37370 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain VAPA_1c37410 PF00909 Ammonium Transporter Family VAPA_1c37420 PF00072 Response regulator receiver domain VAPA_1c37420 PF04397 LytTr DNA-binding domain VAPA_1c37470 PF01926 50S ribosome-binding GTPase VAPA_1c37510 PF13411 MerR HTH family regulatory protein VAPA_1c37530 PF00106 short chain dehydrogenase VAPA_1c37540 PF00072 Response regulator receiver domain VAPA_1c37540 PF01339 CheB methylesterase VAPA_1c37550 PF04262 Glutamate-cysteine ligase VAPA_1c37570 PF02230 Phospholipase/Carboxylesterase VAPA_1c37590 PF07683 Cobalamin synthesis protein cobW C-terminal domain VAPA_1c37590 PF02492 CobW/HypB/UreG, nucleotide-binding domain VAPA_1c37610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c37610 PF03466 LysR substrate binding domain VAPA_1c37620 PF07690 Major Facilitator Superfamily VAPA_1c37640 PF00378 Enoyl-CoA hydratase/isomerase VAPA_1c37670 PF05661 Protein of unknown function (DUF808) VAPA_1c37700 PF09905 DNA-binding protein VF530 VAPA_1c37710 PF00111 2Fe-2S iron-sulfur cluster binding domain VAPA_1c37730 PF00849 RNA pseudouridylate synthase VAPA_1c37740 PF00582 Universal stress protein family VAPA_1c37770 PF10017 Histidine-specific methyltransferase, SAM-dependent VAPA_1c37780 PF12867 DinB superfamily VAPA_1c37780 PF03781 Sulfatase-modifying factor enzyme 1 VAPA_1c37790 PF07992 Pyridine nucleotide-disulphide oxidoreductase VAPA_1c37810 PF00565 Staphylococcal nuclease homologue VAPA_1c37820 PF00501 AMP-binding enzyme VAPA_1c37820 PF13193 AMP-binding enzyme C-terminal domain VAPA_1c37830 PF02566 OsmC-like protein VAPA_1c37840 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_1c37860 PF00497 Bacterial extracellular solute-binding proteins, family 3 VAPA_1c37870 PF00528 Binding-protein-dependent transport system inner membrane component VAPA_1c37880 PF00528 Binding-protein-dependent transport system inner membrane component VAPA_1c37890 PF00005 ABC transporter VAPA_1c37910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c37910 PF03466 LysR substrate binding domain VAPA_1c37920 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_1c37950 PF03009 Glycerophosphoryl diester phosphodiesterase family VAPA_1c37980 PF01266 FAD dependent oxidoreductase VAPA_1c37990 PF03576 Peptidase family S58 VAPA_1c38010 PF13411 MerR HTH family regulatory protein VAPA_1c38030 PF12848 ABC transporter VAPA_1c38030 PF00005 ABC transporter VAPA_1c38040 PF00271 Helicase conserved C-terminal domain VAPA_1c38040 PF00270 DEAD/DEAH box helicase VAPA_1c38080 PF17912 MalK OB fold domain VAPA_1c38080 PF03459 TOBE domain VAPA_1c38080 PF00005 ABC transporter VAPA_1c38090 PF00528 Binding-protein-dependent transport system inner membrane component VAPA_1c38100 PF00528 Binding-protein-dependent transport system inner membrane component VAPA_1c38120 PF00392 Bacterial regulatory proteins, gntR family VAPA_1c38120 PF07729 FCD domain VAPA_1c38130 PF00920 Dehydratase family VAPA_1c38140 PF05035 2-keto-3-deoxy-galactonokinase VAPA_1c38150 PF01081 KDPG and KHG aldolase VAPA_1c38160 PF00596 Class II Aldolase and Adducin N-terminal domain VAPA_1c38240 PF13416 Bacterial extracellular solute-binding protein VAPA_1c38260 PF00005 ABC transporter VAPA_1c38260 PF08402 TOBE domain VAPA_1c38280 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VAPA_1c38300 PF01757 Acyltransferase family VAPA_1c38320 PF01081 KDPG and KHG aldolase VAPA_1c38330 PF00920 Dehydratase family VAPA_1c38370 PF00132 Bacterial transferase hexapeptide (six repeats) VAPA_1c38370 PF12804 MobA-like NTP transferase domain VAPA_1c38380 PF01243 Pyridoxamine 5'-phosphate oxidase VAPA_1c38380 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region VAPA_1c38410 PF03547 Membrane transport protein VAPA_1c38440 PF01625 Peptide methionine sulfoxide reductase VAPA_1c38450 PF00440 Bacterial regulatory proteins, tetR family VAPA_1c38450 PF17922 Tetracyclin repressor-like, C-terminal domain VAPA_1c38490 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) VAPA_1c38490 PF00534 Glycosyl transferases group 1 VAPA_1c38500 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II VAPA_1c38500 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III VAPA_1c38500 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I VAPA_1c38500 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain VAPA_1c38510 PF12833 Helix-turn-helix domain VAPA_1c38510 PF02805 Metal binding domain of Ada VAPA_1c38520 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain VAPA_1c38520 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain VAPA_1c38530 PF00892 EamA-like transporter family VAPA_1c38570 PF02798 Glutathione S-transferase, N-terminal domain VAPA_1c38610 PF00664 ABC transporter transmembrane region VAPA_1c38610 PF00005 ABC transporter VAPA_1c38630 PF00551 Formyl transferase VAPA_1c38650 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) VAPA_1c38660 PF07715 TonB-dependent Receptor Plug Domain VAPA_1c38660 PF00593 TonB dependent receptor VAPA_1c38670 PF00501 AMP-binding enzyme VAPA_1c38670 PF13193 AMP-binding enzyme C-terminal domain VAPA_1c38670 PF00668 Condensation domain VAPA_1c38670 PF00550 Phosphopantetheine attachment site VAPA_1c38670 PF00975 Thioesterase domain VAPA_1c38680 PF00501 AMP-binding enzyme VAPA_1c38680 PF00668 Condensation domain VAPA_1c38680 PF13193 AMP-binding enzyme C-terminal domain VAPA_1c38680 PF00550 Phosphopantetheine attachment site VAPA_1c38690 PF13193 AMP-binding enzyme C-terminal domain VAPA_1c38690 PF00501 AMP-binding enzyme VAPA_1c38690 PF00550 Phosphopantetheine attachment site VAPA_1c38690 PF00668 Condensation domain VAPA_1c38700 PF16197 Ketoacyl-synthetase C-terminal extension VAPA_1c38700 PF00668 Condensation domain VAPA_1c38700 PF00550 Phosphopantetheine attachment site VAPA_1c38700 PF02801 Beta-ketoacyl synthase, C-terminal domain VAPA_1c38700 PF00109 Beta-ketoacyl synthase, N-terminal domain VAPA_1c38700 PF00698 Acyl transferase domain VAPA_1c38710 PF00550 Phosphopantetheine attachment site VAPA_1c38710 PF00668 Condensation domain VAPA_1c38710 PF00501 AMP-binding enzyme VAPA_1c38710 PF13193 AMP-binding enzyme C-terminal domain VAPA_1c38750 PF03621 MbtH-like protein VAPA_1c38810 PF07715 TonB-dependent Receptor Plug Domain VAPA_1c38810 PF00593 TonB dependent receptor VAPA_1c38820 PF01546 Peptidase family M20/M25/M40 VAPA_1c38820 PF07687 Peptidase dimerisation domain VAPA_1c38830 PF01569 PAP2 superfamily VAPA_1c38870 PF00749 tRNA synthetases class I (E and Q), catalytic domain VAPA_1c38880 PF01053 Cys/Met metabolism PLP-dependent enzyme VAPA_1c38890 PF00156 Phosphoribosyl transferase domain VAPA_1c38920 PF08245 Mur ligase middle domain VAPA_1c38920 PF02875 Mur ligase family, glutamate ligase domain VAPA_1c38930 PF03960 ArsC family VAPA_1c38950 PF06865 Pyrimidine/purine nucleoside phosphorylase VAPA_1c38960 PF00764 Arginosuccinate synthase VAPA_1c38980 PF01565 FAD binding domain VAPA_1c38980 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain VAPA_1c38990 PF04461 Protein of unknown function (DUF520) VAPA_1c39010 PF01042 Endoribonuclease L-PSP VAPA_1c39020 PF02660 Glycerol-3-phosphate acyltransferase VAPA_1c39030 PF04073 Aminoacyl-tRNA editing domain VAPA_1c39040 PF00248 Aldo/keto reductase family VAPA_1c39050 PF12697 Alpha/beta hydrolase family VAPA_1c39080 PF03180 NLPA lipoprotein VAPA_1c39090 PF00528 Binding-protein-dependent transport system inner membrane component VAPA_1c39100 PF09383 NIL domain VAPA_1c39100 PF00005 ABC transporter VAPA_1c39110 PF03180 NLPA lipoprotein VAPA_1c39120 PF00472 RF-1 domain VAPA_1c39120 PF03462 PCRF domain VAPA_1c39130 PF13419 Haloacid dehalogenase-like hydrolase VAPA_1c39140 PF11940 Domain of unknown function (DUF3458) Ig-like fold VAPA_1c39140 PF17432 Domain of unknown function (DUF3458_C) ARM repeats VAPA_1c39140 PF01433 Peptidase family M1 domain VAPA_1c39150 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain VAPA_1c39180 PF01515 Phosphate acetyl/butaryl transferase VAPA_1c39210 PF01799 [2Fe-2S] binding domain VAPA_1c39210 PF00111 2Fe-2S iron-sulfur cluster binding domain VAPA_1c39210 PF10518 TAT (twin-arginine translocation) pathway signal sequence VAPA_1c39220 PF03450 CO dehydrogenase flavoprotein C-terminal domain VAPA_1c39220 PF00941 FAD binding domain in molybdopterin dehydrogenase VAPA_1c39230 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain VAPA_1c39230 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase VAPA_1c39240 PF08450 SMP-30/Gluconolactonase/LRE-like region VAPA_1c39250 PF04976 DMSO reductase anchor subunit (DmsC) VAPA_1c39260 PF13247 4Fe-4S dicluster domain VAPA_1c39260 PF12800 4Fe-4S binding domain VAPA_1c39270 PF04879 Molybdopterin oxidoreductase Fe4S4 domain VAPA_1c39270 PF00384 Molybdopterin oxidoreductase VAPA_1c39270 PF01568 Molydopterin dinucleotide binding domain VAPA_1c39280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c39280 PF03466 LysR substrate binding domain VAPA_1c39300 PF00392 Bacterial regulatory proteins, gntR family VAPA_1c39300 PF07702 UTRA domain VAPA_1c39310 PF08666 SAF domain VAPA_1c39320 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus VAPA_1c39330 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VAPA_1c39330 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VAPA_1c39340 PF02615 Malate/L-lactate dehydrogenase VAPA_1c39350 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_1c39360 PF00871 Acetokinase family VAPA_1c39370 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VAPA_1c39370 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VAPA_1c39370 PF00205 Thiamine pyrophosphate enzyme, central domain VAPA_1c39380 PF01614 Bacterial transcriptional regulator VAPA_1c39380 PF09339 IclR helix-turn-helix domain VAPA_1c39390 PF07728 AAA domain (dynein-related subfamily) VAPA_1c39390 PF08406 CbbQ/NirQ/NorQ C-terminal VAPA_1c39390 PF12556 Cobaltochelatase CobS subunit N terminal VAPA_1c39400 PF11775 Cobalamin biosynthesis protein CobT VWA domain VAPA_1c39400 PF06213 Cobalamin biosynthesis protein CobT VAPA_1c39420 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_1c39430 PF00171 Aldehyde dehydrogenase family VAPA_1c39440 PF00501 AMP-binding enzyme VAPA_1c39440 PF13193 AMP-binding enzyme C-terminal domain VAPA_1c39470 PF01614 Bacterial transcriptional regulator VAPA_1c39470 PF09339 IclR helix-turn-helix domain VAPA_1c39480 PF00732 GMC oxidoreductase VAPA_1c39480 PF05199 GMC oxidoreductase VAPA_1c39490 PF00083 Sugar (and other) transporter VAPA_1c39490 PF07690 Major Facilitator Superfamily VAPA_1c39500 PF00196 Bacterial regulatory proteins, luxR family VAPA_1c39500 PF03472 Autoinducer binding domain VAPA_1c39520 PF00111 2Fe-2S iron-sulfur cluster binding domain VAPA_1c39520 PF01799 [2Fe-2S] binding domain VAPA_1c39530 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase VAPA_1c39540 PF00034 Cytochrome c VAPA_1c39540 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase VAPA_1c39540 PF13442 Cytochrome C oxidase, cbb3-type, subunit III VAPA_1c39550 PF03466 LysR substrate binding domain VAPA_1c39550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c39560 PF00528 Binding-protein-dependent transport system inner membrane component VAPA_1c39580 PF04069 Substrate binding domain of ABC-type glycine betaine transport system VAPA_1c39600 PF00392 Bacterial regulatory proteins, gntR family VAPA_1c39600 PF00155 Aminotransferase class I and II VAPA_1c39630 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VAPA_1c39640 PF00528 Binding-protein-dependent transport system inner membrane component VAPA_1c39650 PF12911 N-terminal TM domain of oligopeptide transport permease C VAPA_1c39650 PF00528 Binding-protein-dependent transport system inner membrane component VAPA_1c39660 PF00005 ABC transporter VAPA_1c39660 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VAPA_1c39670 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VAPA_1c39670 PF00005 ABC transporter VAPA_1c39680 PF01979 Amidohydrolase family VAPA_1c39690 PF02492 CobW/HypB/UreG, nucleotide-binding domain VAPA_1c39690 PF07683 Cobalamin synthesis protein cobW C-terminal domain VAPA_1c39720 PF03797 Autotransporter beta-domain VAPA_1c39720 PF13018 Extended Signal Peptide of Type V secretion system VAPA_1c39720 PF03212 Pertactin VAPA_1c39720 PF16168 Adhesin of bacterial autotransporter system, probable stalk VAPA_1c39740 PF01595 Cyclin M transmembrane N-terminal domain VAPA_1c39740 PF03471 Transporter associated domain VAPA_1c39740 PF00571 CBS domain VAPA_1c39750 PF00149 Calcineurin-like phosphoesterase VAPA_1c39770 PF00392 Bacterial regulatory proteins, gntR family VAPA_1c39770 PF00155 Aminotransferase class I and II VAPA_1c39780 PF04717 Type VI secretion system, phage-baseplate injector VAPA_1c39820 PF09084 NMT1/THI5 like VAPA_1c39840 PF00005 ABC transporter VAPA_1c39850 PF00528 Binding-protein-dependent transport system inner membrane component VAPA_1c39860 PF09084 NMT1/THI5 like VAPA_1c39870 PF00596 Class II Aldolase and Adducin N-terminal domain VAPA_1c39880 PF00296 Luciferase-like monooxygenase VAPA_1c39900 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VAPA_1c39900 PF02770 Acyl-CoA dehydrogenase, middle domain VAPA_1c39900 PF08028 Acyl-CoA dehydrogenase, C-terminal domain VAPA_1c39910 PF09084 NMT1/THI5 like VAPA_1c39920 PF05995 Cysteine dioxygenase type I VAPA_1c39950 PF00271 Helicase conserved C-terminal domain VAPA_1c39950 PF00270 DEAD/DEAH box helicase VAPA_1c39960 PF04228 Putative neutral zinc metallopeptidase VAPA_1c39970 PF00692 dUTPase VAPA_1c39980 PF01979 Amidohydrolase family VAPA_1c40010 PF03466 LysR substrate binding domain VAPA_1c40010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c40020 PF02608 ABC transporter substrate-binding protein PnrA-like VAPA_1c40030 PF01804 Penicillin amidase VAPA_1c40040 PF12833 Helix-turn-helix domain VAPA_1c40040 PF02311 AraC-like ligand binding domain VAPA_1c40050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c40050 PF03466 LysR substrate binding domain VAPA_1c40060 PF07690 Major Facilitator Superfamily VAPA_1c40070 PF00962 Adenosine/AMP deaminase VAPA_1c40080 PF00034 Cytochrome c VAPA_1c40090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c40090 PF03466 LysR substrate binding domain VAPA_1c40100 PF08240 Alcohol dehydrogenase GroES-like domain VAPA_1c40100 PF00107 Zinc-binding dehydrogenase VAPA_1c40120 PF01965 DJ-1/PfpI family VAPA_1c40130 PF01965 DJ-1/PfpI family VAPA_1c40140 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_1c40150 PF04909 Amidohydrolase VAPA_1c40160 PF02515 CoA-transferase family III VAPA_1c40170 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_1c40180 PF03328 HpcH/HpaI aldolase/citrate lyase family VAPA_1c40190 PF03466 LysR substrate binding domain VAPA_1c40190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c40200 PF02608 ABC transporter substrate-binding protein PnrA-like VAPA_1c40240 PF00860 Permease family VAPA_1c40250 PF03466 LysR substrate binding domain VAPA_1c40250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c40260 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain VAPA_1c40260 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase VAPA_1c40270 PF01799 [2Fe-2S] binding domain VAPA_1c40270 PF00111 2Fe-2S iron-sulfur cluster binding domain VAPA_1c40280 PF03621 MbtH-like protein VAPA_1c40300 PF00501 AMP-binding enzyme VAPA_1c40300 PF00550 Phosphopantetheine attachment site VAPA_1c40300 PF00668 Condensation domain VAPA_1c40300 PF00975 Thioesterase domain VAPA_1c40300 PF13193 AMP-binding enzyme C-terminal domain VAPA_1c40320 PF03466 LysR substrate binding domain VAPA_1c40320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c40330 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) VAPA_1c40340 PF07995 Glucose / Sorbosone dehydrogenase VAPA_1c40380 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_1c40420 PF00690 Cation transporter/ATPase, N-terminus VAPA_1c40420 PF00689 Cation transporting ATPase, C-terminus VAPA_1c40430 PF00171 Aldehyde dehydrogenase family VAPA_1c40440 PF05161 MOFRL family VAPA_1c40440 PF13660 Domain of unknown function (DUF4147) VAPA_1c40500 PF00576 HIUase/Transthyretin family VAPA_1c40510 PF00392 Bacterial regulatory proteins, gntR family VAPA_1c40510 PF07729 FCD domain VAPA_1c40530 PF07687 Peptidase dimerisation domain VAPA_1c40530 PF01546 Peptidase family M20/M25/M40 VAPA_1c40540 PF07687 Peptidase dimerisation domain VAPA_1c40540 PF01546 Peptidase family M20/M25/M40 VAPA_1c40550 PF00392 Bacterial regulatory proteins, gntR family VAPA_1c40550 PF07729 FCD domain VAPA_1c40560 PF02913 FAD linked oxidases, C-terminal domain VAPA_1c40560 PF01565 FAD binding domain VAPA_1c40570 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component VAPA_1c40580 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VAPA_1c40590 PF03480 Bacterial extracellular solute-binding protein, family 7 VAPA_1c40630 PF00701 Dihydrodipicolinate synthetase family VAPA_1c40650 PF00497 Bacterial extracellular solute-binding proteins, family 3 VAPA_1c40700 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_1c40730 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin VAPA_1c40740 PF01177 Asp/Glu/Hydantoin racemase VAPA_1c40770 PF00440 Bacterial regulatory proteins, tetR family VAPA_1c40780 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family VAPA_1c40800 PF00860 Permease family VAPA_1c40810 PF00248 Aldo/keto reductase family VAPA_1c40820 PF00512 His Kinase A (phospho-acceptor) domain VAPA_1c40820 PF00989 PAS fold VAPA_1c40820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAPA_1c40830 PF00196 Bacterial regulatory proteins, luxR family VAPA_1c40830 PF00072 Response regulator receiver domain VAPA_1c40840 PF00083 Sugar (and other) transporter VAPA_1c40860 PF00535 Glycosyl transferase family 2 VAPA_1c40870 PF00375 Sodium:dicarboxylate symporter family VAPA_1c40890 PF01594 AI-2E family transporter VAPA_1c40920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c40920 PF03466 LysR substrate binding domain VAPA_1c40930 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VAPA_1c40930 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VAPA_1c40930 PF00205 Thiamine pyrophosphate enzyme, central domain VAPA_1c40940 PF01261 Xylose isomerase-like TIM barrel VAPA_1c40950 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase VAPA_1c40950 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase VAPA_1c40960 PF04820 Tryptophan halogenase VAPA_1c40970 PF01515 Phosphate acetyl/butaryl transferase VAPA_1c40970 PF00390 Malic enzyme, N-terminal domain VAPA_1c40970 PF03949 Malic enzyme, NAD binding domain VAPA_1c40980 PF00701 Dihydrodipicolinate synthetase family VAPA_1c41000 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VAPA_1c41010 PF03480 Bacterial extracellular solute-binding protein, family 7 VAPA_1c41030 PF00005 ABC transporter VAPA_1c41040 PF00528 Binding-protein-dependent transport system inner membrane component VAPA_1c41120 PF01638 HxlR-like helix-turn-helix VAPA_1c41140 PF01037 Lrp/AsnC ligand binding domain VAPA_1c41150 PF01266 FAD dependent oxidoreductase VAPA_1c41160 PF00355 Rieske [2Fe-2S] domain VAPA_1c41180 PF14437 MafB19-like deaminase VAPA_1c41190 PF01774 UreD urease accessory protein VAPA_1c41200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c41200 PF03466 LysR substrate binding domain VAPA_1c41210 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase VAPA_1c41210 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase VAPA_1c41230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c41230 PF03466 LysR substrate binding domain VAPA_1c41260 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_1c41270 PF01053 Cys/Met metabolism PLP-dependent enzyme VAPA_1c41310 PF00593 TonB dependent receptor VAPA_1c41310 PF07715 TonB-dependent Receptor Plug Domain VAPA_1c41320 PF04328 Selenoprotein, putative VAPA_1c41330 PF02554 Carbon starvation protein CstA VAPA_1c41330 PF13722 5TM C-terminal transporter carbon starvation CstA VAPA_1c41360 PF00877 NlpC/P60 family VAPA_1c41450 PF00072 Response regulator receiver domain VAPA_1c41450 PF00196 Bacterial regulatory proteins, luxR family VAPA_1c41460 PF07730 Histidine kinase VAPA_1c41460 PF17200 Single Cache domain 2 VAPA_1c41480 PF00248 Aldo/keto reductase family VAPA_1c41490 PF09423 PhoD-like phosphatase VAPA_1c41490 PF16655 PhoD-like phosphatase, N-terminal domain VAPA_1c41500 PF03009 Glycerophosphoryl diester phosphodiesterase family VAPA_1c41510 PF00528 Binding-protein-dependent transport system inner membrane component VAPA_1c41520 PF00528 Binding-protein-dependent transport system inner membrane component VAPA_1c41530 PF13416 Bacterial extracellular solute-binding protein VAPA_1c41550 PF00325 Bacterial regulatory proteins, crp family VAPA_1c41550 PF04198 Putative sugar-binding domain VAPA_1c41560 PF07690 Major Facilitator Superfamily VAPA_1c41570 PF00005 ABC transporter VAPA_1c41580 PF12399 Branched-chain amino acid ATP-binding cassette transporter VAPA_1c41580 PF00005 ABC transporter VAPA_1c41590 PF02653 Branched-chain amino acid transport system / permease component VAPA_1c41600 PF02653 Branched-chain amino acid transport system / permease component VAPA_1c41620 PF07690 Major Facilitator Superfamily VAPA_1c41640 PF12833 Helix-turn-helix domain VAPA_1c41640 PF12852 Cupin VAPA_1c41660 PF03976 Polyphosphate kinase 2 (PPK2) VAPA_1c41680 PF02811 PHP domain VAPA_1c41700 PF01300 Telomere recombination VAPA_1c41710 PF02163 Peptidase family M50 VAPA_1c41720 PF00579 tRNA synthetases class I (W and Y) VAPA_1c41730 PF00072 Response regulator receiver domain VAPA_1c41730 PF00196 Bacterial regulatory proteins, luxR family VAPA_1c41740 PF18698 Histidine kinase sensor domain VAPA_1c41740 PF00672 HAMP domain VAPA_1c41740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAPA_1c41740 PF00512 His Kinase A (phospho-acceptor) domain VAPA_1c41760 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) VAPA_1c41760 PF02403 Seryl-tRNA synthetase N-terminal domain VAPA_1c41770 PF06983 3-demethylubiquinone-9 3-methyltransferase VAPA_1c41780 PF00291 Pyridoxal-phosphate dependent enzyme VAPA_1c41780 PF13291 ACT domain VAPA_1c41790 PF02401 LytB protein VAPA_1c41800 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VAPA_1c41810 PF04002 RadC-like JAB domain VAPA_1c41820 PF01713 Smr domain VAPA_1c41830 PF07992 Pyridine nucleotide-disulphide oxidoreductase VAPA_1c41830 PF14759 Reductase C-terminal VAPA_1c41850 PF07055 Enoyl reductase FAD binding domain VAPA_1c41850 PF12241 Trans-2-enoyl-CoA reductase catalytic region VAPA_1c41850 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase VAPA_1c41860 PF00497 Bacterial extracellular solute-binding proteins, family 3 VAPA_1c41870 PF00528 Binding-protein-dependent transport system inner membrane component VAPA_1c41880 PF00528 Binding-protein-dependent transport system inner membrane component VAPA_1c41890 PF00005 ABC transporter VAPA_1c41900 PF03171 2OG-Fe(II) oxygenase superfamily VAPA_1c41900 PF14226 non-haem dioxygenase in morphine synthesis N-terminal VAPA_1c41910 PF13419 Haloacid dehalogenase-like hydrolase VAPA_1c41920 PF07690 Major Facilitator Superfamily VAPA_1c41920 PF00083 Sugar (and other) transporter VAPA_1c41930 PF00116 Cytochrome C oxidase subunit II, periplasmic domain VAPA_1c41930 PF06481 COX Aromatic Rich Motif VAPA_1c41940 PF00115 Cytochrome C and Quinol oxidase polypeptide I VAPA_1c41950 PF00510 Cytochrome c oxidase subunit III VAPA_1c41960 PF03626 Prokaryotic Cytochrome C oxidase subunit IV VAPA_1c41980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAPA_1c41980 PF00512 His Kinase A (phospho-acceptor) domain VAPA_1c41990 PF00072 Response regulator receiver domain VAPA_1c42000 PF03006 Haemolysin-III related VAPA_1c42020 PF00106 short chain dehydrogenase VAPA_1c42040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c42040 PF03466 LysR substrate binding domain VAPA_1c42050 PF07690 Major Facilitator Superfamily VAPA_1c42060 PF03466 LysR substrate binding domain VAPA_1c42060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c42090 PF02634 FdhD/NarQ family VAPA_1c42130 PF13247 4Fe-4S dicluster domain VAPA_1c42140 PF01568 Molydopterin dinucleotide binding domain VAPA_1c42140 PF04879 Molybdopterin oxidoreductase Fe4S4 domain VAPA_1c42140 PF00384 Molybdopterin oxidoreductase VAPA_1c42200 PF00005 ABC transporter VAPA_1c42200 PF03459 TOBE domain VAPA_1c42220 PF00528 Binding-protein-dependent transport system inner membrane component VAPA_1c42230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c42230 PF03459 TOBE domain VAPA_1c42240 PF00384 Molybdopterin oxidoreductase VAPA_1c42240 PF01568 Molydopterin dinucleotide binding domain VAPA_1c42240 PF04879 Molybdopterin oxidoreductase Fe4S4 domain VAPA_1c42250 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit VAPA_1c42250 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region VAPA_1c42250 PF10531 SLBB domain VAPA_1c42260 PF03466 LysR substrate binding domain VAPA_1c42260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c42270 PF10609 NUBPL iron-transfer P-loop NTPase VAPA_1c42290 PF13305 Tetracyclin repressor-like, C-terminal domain VAPA_1c42290 PF00440 Bacterial regulatory proteins, tetR family VAPA_1c42320 PF04337 Protein of unknown function, DUF480 VAPA_1c42330 PF09992 Phosphodiester glycosidase VAPA_1c42340 PF18324 Hypothetical protein TT1725 VAPA_1c42340 PF00180 Isocitrate/isopropylmalate dehydrogenase VAPA_1c42350 PF09334 tRNA synthetases class I (M) VAPA_1c42350 PF01588 Putative tRNA binding domain VAPA_1c42380 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_1c42390 PF02515 CoA-transferase family III VAPA_1c42410 PF00916 Sulfate permease family VAPA_1c42410 PF01740 STAS domain VAPA_1c42430 PF13340 Putative transposase of IS4/5 family (DUF4096) VAPA_1c42460 PF02616 Segregation and condensation protein ScpA VAPA_1c42470 PF00890 FAD binding domain VAPA_1c42470 PF02910 Fumarate reductase flavoprotein C-term VAPA_1c42480 PF02548 Ketopantoate hydroxymethyltransferase VAPA_1c42490 PF02569 Pantoate-beta-alanine ligase VAPA_1c42520 PF02445 Quinolinate synthetase A protein VAPA_1c42530 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain VAPA_1c42530 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain VAPA_1c42540 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus VAPA_1c42540 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus VAPA_1c42550 PF02556 Preprotein translocase subunit SecB VAPA_1c42560 PF00462 Glutaredoxin VAPA_1c42570 PF00581 Rhodanese-like domain VAPA_1c42580 PF00300 Histidine phosphatase superfamily (branch 1) VAPA_1c42590 PF13180 PDZ domain VAPA_1c42590 PF03572 Peptidase family S41 VAPA_1c42600 PF00899 ThiF family VAPA_1c42610 PF05170 AsmA family VAPA_1c42630 PF00196 Bacterial regulatory proteins, luxR family VAPA_1c42630 PF00072 Response regulator receiver domain VAPA_1c42640 PF07730 Histidine kinase VAPA_1c42700 PF04972 BON domain VAPA_1c42720 PF00893 Small Multidrug Resistance protein VAPA_1c42740 PF01227 GTP cyclohydrolase I VAPA_1c42750 PF03372 Endonuclease/Exonuclease/phosphatase family VAPA_1c42760 PF00293 NUDIX domain VAPA_1c42770 PF02938 GAD domain VAPA_1c42770 PF01336 OB-fold nucleic acid binding domain VAPA_1c42770 PF00152 tRNA synthetases class II (D, K and N) VAPA_1c42800 PF00474 Sodium:solute symporter family VAPA_1c42810 PF03109 ABC1 family VAPA_1c42840 PF01209 ubiE/COQ5 methyltransferase family VAPA_1c42880 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VAPA_1c42880 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VAPA_1c42890 PF13416 Bacterial extracellular solute-binding protein VAPA_1c42900 PF00528 Binding-protein-dependent transport system inner membrane component VAPA_1c42910 PF00528 Binding-protein-dependent transport system inner membrane component VAPA_1c42920 PF17912 MalK OB fold domain VAPA_1c42920 PF00005 ABC transporter VAPA_1c42930 PF03009 Glycerophosphoryl diester phosphodiesterase family VAPA_1c42940 PF00924 Mechanosensitive ion channel VAPA_1c42940 PF12794 Mechanosensitive ion channel inner membrane domain 1 VAPA_1c42940 PF12795 Mechanosensitive ion channel porin domain VAPA_1c42950 PF01312 FlhB HrpN YscU SpaS Family VAPA_1c42960 PF00771 FHIPEP family VAPA_1c42970 PF00448 SRP54-type protein, GTPase domain VAPA_1c42970 PF00448 SRP54-type protein, GTPase domain VAPA_1c42990 PF04539 Sigma-70 region 3 VAPA_1c42990 PF04545 Sigma-70, region 4 VAPA_1c42990 PF04542 Sigma-70 region 2 VAPA_1c43010 PF00753 Metallo-beta-lactamase superfamily VAPA_1c43010 PF00581 Rhodanese-like domain VAPA_1c43060 PF04344 Chemotaxis phosphatase, CheZ VAPA_1c43070 PF00072 Response regulator receiver domain VAPA_1c43080 PF01339 CheB methylesterase VAPA_1c43080 PF00072 Response regulator receiver domain VAPA_1c43100 PF01739 CheR methyltransferase, SAM binding domain VAPA_1c43100 PF03705 CheR methyltransferase, all-alpha domain VAPA_1c43110 PF08668 HDOD domain VAPA_1c43110 PF00563 EAL domain VAPA_1c43120 PF01584 CheW-like domain VAPA_1c43120 PF09078 CheY binding VAPA_1c43120 PF02895 Signal transducing histidine kinase, homodimeric domain VAPA_1c43120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAPA_1c43120 PF01627 Hpt domain VAPA_1c43130 PF13677 Membrane MotB of proton-channel complex MotA/MotB VAPA_1c43130 PF00691 OmpA family VAPA_1c43140 PF01618 MotA/TolQ/ExbB proton channel family VAPA_1c43150 PF05280 Flagellar transcriptional activator (FlhC) VAPA_1c43160 PF05247 Flagellar transcriptional activator (FlhD) VAPA_1c43200 PF02561 Flagellar protein FliS VAPA_1c43210 PF07195 Flagellar hook-associated protein 2 C-terminus VAPA_1c43210 PF02465 Flagellar hook-associated protein 2 N-terminus VAPA_1c43220 PF03646 FlaG protein VAPA_1c43230 PF00700 Bacterial flagellin C-terminal helical region VAPA_1c43230 PF00669 Bacterial flagellin N-terminal helical region VAPA_1c43230 PF08884 Flagellin D3 domain VAPA_1c43250 PF08345 Flagellar M-ring protein C-terminal VAPA_1c43250 PF01514 Secretory protein of YscJ/FliF family VAPA_1c43260 PF14841 FliG middle domain VAPA_1c43260 PF01706 FliG C-terminal domain VAPA_1c43260 PF14842 FliG N-terminal domain VAPA_1c43270 PF02108 Flagellar assembly protein FliH VAPA_1c43280 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VAPA_1c43280 PF18269 T3SS EscN ATPase C-terminal domain VAPA_1c43290 PF02050 Flagellar FliJ protein VAPA_1c43310 PF03748 Flagellar basal body-associated protein FliL VAPA_1c43320 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term VAPA_1c43320 PF02154 Flagellar motor switch protein FliM VAPA_1c43330 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term VAPA_1c43340 PF04347 Flagellar biosynthesis protein, FliO VAPA_1c43350 PF00813 FliP family VAPA_1c43360 PF01313 Bacterial export proteins, family 3 VAPA_1c43370 PF01311 Bacterial export proteins, family 1 VAPA_1c43380 PF00669 Bacterial flagellin N-terminal helical region VAPA_1c43390 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VAPA_1c43390 PF00460 Flagella basal body rod protein VAPA_1c43400 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAPA_1c43400 PF02203 Tar ligand binding domain homologue VAPA_1c43400 PF00672 HAMP domain VAPA_1c43410 PF02203 Tar ligand binding domain homologue VAPA_1c43410 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAPA_1c43410 PF00672 HAMP domain VAPA_1c43420 PF01584 CheW-like domain VAPA_1c43430 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAPA_1c43430 PF17200 Single Cache domain 2 VAPA_1c43430 PF00672 HAMP domain VAPA_1c43440 PF02203 Tar ligand binding domain homologue VAPA_1c43440 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAPA_1c43440 PF00672 HAMP domain VAPA_1c43450 PF08447 PAS fold VAPA_1c43450 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAPA_1c43460 PF00672 HAMP domain VAPA_1c43460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAPA_1c43460 PF02203 Tar ligand binding domain homologue VAPA_1c43470 PF01584 CheW-like domain VAPA_1c43480 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase VAPA_1c43480 PF10135 Rod binding protein VAPA_1c43500 PF02107 Flagellar L-ring protein VAPA_1c43510 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VAPA_1c43510 PF00460 Flagella basal body rod protein VAPA_1c43520 PF00460 Flagella basal body rod protein VAPA_1c43520 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VAPA_1c43530 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VAPA_1c43530 PF07559 Flagellar basal body protein FlaE VAPA_1c43530 PF00460 Flagella basal body rod protein VAPA_1c43540 PF13861 FlgD Tudor-like domain VAPA_1c43540 PF13860 FlgD Ig-like domain VAPA_1c43540 PF03963 Flagellar hook capping protein - N-terminal region VAPA_1c43550 PF00460 Flagella basal body rod protein VAPA_1c43550 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VAPA_1c43560 PF00460 Flagella basal body rod protein VAPA_1c43620 PF01488 Shikimate / quinate 5-dehydrogenase VAPA_1c43620 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain VAPA_1c43620 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain VAPA_1c43630 PF00472 RF-1 domain VAPA_1c43630 PF03462 PCRF domain VAPA_1c43640 PF05175 Methyltransferase small domain VAPA_1c43640 PF17827 PrmC N-terminal domain VAPA_1c43650 PF00462 Glutaredoxin VAPA_1c43670 PF01595 Cyclin M transmembrane N-terminal domain VAPA_1c43670 PF03471 Transporter associated domain VAPA_1c43670 PF00571 CBS domain VAPA_1c43680 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain VAPA_1c43680 PF01464 Transglycosylase SLT domain VAPA_1c43690 PF04073 Aminoacyl-tRNA editing domain VAPA_1c43690 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) VAPA_1c43690 PF03129 Anticodon binding domain VAPA_1c43700 PF00293 NUDIX domain VAPA_1c43720 PF01472 PUA domain VAPA_1c43720 PF00696 Amino acid kinase family VAPA_1c43730 PF01926 50S ribosome-binding GTPase VAPA_1c43730 PF01018 GTP1/OBG VAPA_1c43740 PF01016 Ribosomal L27 protein VAPA_1c43750 PF00829 Ribosomal prokaryotic L21 protein VAPA_1c43760 PF00348 Polyprenyl synthetase VAPA_1c43780 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain VAPA_1c43780 PF00437 Type II/IV secretion system protein VAPA_1c43790 PF00482 Type II secretion system (T2SS), protein F VAPA_1c43800 PF01478 Type IV leader peptidase family VAPA_1c43800 PF06750 Bacterial Peptidase A24 N-terminal domain VAPA_1c43810 PF01121 Dephospho-CoA kinase VAPA_1c43820 PF03062 MBOAT, membrane-bound O-acyltransferase family VAPA_1c43840 PF07072 Cell division protein VAPA_1c43850 PF03884 DNA gyrase inhibitor YacG VAPA_1c43860 PF01757 Acyltransferase family VAPA_1c43870 PF00293 NUDIX domain VAPA_1c43890 PF01960 ArgJ family VAPA_1c43900 PF01043 SecA preprotein cross-linking domain VAPA_1c43900 PF07517 SecA DEAD-like domain VAPA_1c43900 PF07516 SecA Wing and Scaffold domain VAPA_1c43900 PF02810 SEC-C motif VAPA_1c43920 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_1c43930 PF00291 Pyridoxal-phosphate dependent enzyme VAPA_1c43940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c43940 PF03466 LysR substrate binding domain VAPA_1c43970 PF00072 Response regulator receiver domain VAPA_1c43980 PF00512 His Kinase A (phospho-acceptor) domain VAPA_1c43980 PF00072 Response regulator receiver domain VAPA_1c43980 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) VAPA_1c43980 PF00672 HAMP domain VAPA_1c43980 PF01627 Hpt domain VAPA_1c43980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAPA_1c43990 PF00547 Urease, gamma subunit VAPA_1c44010 PF00699 Urease beta subunit VAPA_1c44020 PF00449 Urease alpha-subunit, N-terminal domain VAPA_1c44020 PF01979 Amidohydrolase family VAPA_1c44050 PF02814 UreE urease accessory protein, N-terminal domain VAPA_1c44050 PF05194 UreE urease accessory protein, C-terminal domain VAPA_1c44060 PF01730 UreF VAPA_1c44070 PF02492 CobW/HypB/UreG, nucleotide-binding domain VAPA_1c44110 PF13609 Gram-negative porin VAPA_1c44130 PF01103 Surface antigen VAPA_1c44130 PF07244 Surface antigen variable number repeat VAPA_1c44140 PF00486 Transcriptional regulatory protein, C terminal VAPA_1c44140 PF00072 Response regulator receiver domain VAPA_1c44160 PF00775 Dioxygenase VAPA_1c44160 PF04444 Catechol dioxygenase N terminus VAPA_1c44180 PF00512 His Kinase A (phospho-acceptor) domain VAPA_1c44180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAPA_1c44180 PF00672 HAMP domain VAPA_1c44190 PF00072 Response regulator receiver domain VAPA_1c44190 PF00486 Transcriptional regulatory protein, C terminal VAPA_1c44210 PF05170 AsmA family VAPA_1c44260 PF00216 Bacterial DNA-binding protein VAPA_1c44270 PF02321 Outer membrane efflux protein VAPA_1c44310 PF00378 Enoyl-CoA hydratase/isomerase VAPA_1c44320 PF02515 CoA-transferase family III VAPA_1c44340 PF03466 LysR substrate binding domain VAPA_1c44340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c44360 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) VAPA_1c44660 PF02413 Caudovirales tail fibre assembly protein, lambda gpK VAPA_1c44880 PF00589 Phage integrase family VAPA_1c44880 PF13356 Arm DNA-binding domain VAPA_1c44880 PF14659 Phage integrase, N-terminal SAM-like domain VAPA_1c44900 PF06969 HemN C-terminal domain VAPA_1c44900 PF04055 Radical SAM superfamily VAPA_1c44910 PF01725 Ham1 family VAPA_1c44920 PF01138 3' exoribonuclease family, domain 1 VAPA_1c44920 PF03725 3' exoribonuclease family, domain 2 VAPA_1c44940 PF03793 PASTA domain VAPA_1c44940 PF00069 Protein kinase domain VAPA_1c44950 PF08340 Domain of unknown function (DUF1732) VAPA_1c44950 PF03755 YicC-like family, N-terminal region VAPA_1c44960 PF00625 Guanylate kinase VAPA_1c44970 PF01192 RNA polymerase Rpb6 VAPA_1c44980 PF04607 Region found in RelA / SpoT proteins VAPA_1c44980 PF13291 ACT domain VAPA_1c44980 PF02824 TGS domain VAPA_1c44990 PF01272 Transcription elongation factor, GreA/GreB, C-term VAPA_1c44990 PF03449 Transcription elongation factor, N-terminal VAPA_1c45040 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding VAPA_1c45040 PF01628 HrcA protein C terminal domain VAPA_1c45050 PF01513 ATP-NAD kinase VAPA_1c45060 PF02463 RecF/RecN/SMC N terminal domain VAPA_1c45070 PF03668 P-loop ATPase protein family VAPA_1c45080 PF00730 HhH-GPD superfamily base excision DNA repair protein VAPA_1c45080 PF00633 Helix-hairpin-helix motif VAPA_1c45080 PF14815 NUDIX domain VAPA_1c45090 PF00350 Dynamin family VAPA_1c45100 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain VAPA_1c45100 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain VAPA_1c45100 PF06827 Zinc finger found in FPG and IleRS VAPA_1c45130 PF08544 GHMP kinases C terminal VAPA_1c45130 PF00288 GHMP kinases N terminal domain VAPA_1c45150 PF14572 Phosphoribosyl synthetase-associated domain VAPA_1c45150 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase VAPA_1c45160 PF14693 Ribosomal protein TL5, C-terminal domain VAPA_1c45160 PF01386 Ribosomal L25p family VAPA_1c45170 PF01195 Peptidyl-tRNA hydrolase VAPA_1c45190 PF00037 4Fe-4S binding domain VAPA_1c45200 PF00528 Binding-protein-dependent transport system inner membrane component VAPA_1c45210 PF00528 Binding-protein-dependent transport system inner membrane component VAPA_1c45210 PF12911 N-terminal TM domain of oligopeptide transport permease C VAPA_1c45220 PF00005 ABC transporter VAPA_1c45220 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VAPA_1c45230 PF00005 ABC transporter VAPA_1c45230 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VAPA_1c45240 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VAPA_1c45250 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VAPA_1c45260 PF01425 Amidase VAPA_1c45300 PF03466 LysR substrate binding domain VAPA_1c45300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c45330 PF07969 Amidohydrolase family VAPA_1c45340 PF00300 Histidine phosphatase superfamily (branch 1) VAPA_1c45360 PF12697 Alpha/beta hydrolase family VAPA_1c45370 PF01470 Pyroglutamyl peptidase VAPA_1c45380 PF03746 LamB/YcsF family VAPA_1c45390 PF02626 Carboxyltransferase domain, subdomain A and B VAPA_1c45400 PF02682 Carboxyltransferase domain, subdomain C and D VAPA_1c45410 PF01467 Cytidylyltransferase-like VAPA_1c45440 PF03466 LysR substrate binding domain VAPA_1c45440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c45450 PF05193 Peptidase M16 inactive domain VAPA_1c45460 PF05193 Peptidase M16 inactive domain VAPA_1c45460 PF00675 Insulinase (Peptidase family M16) VAPA_1c45470 PF00448 SRP54-type protein, GTPase domain VAPA_1c45470 PF02881 SRP54-type protein, helical bundle domain VAPA_1c45490 PF00512 His Kinase A (phospho-acceptor) domain VAPA_1c45490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAPA_1c45500 PF00072 Response regulator receiver domain VAPA_1c45500 PF00196 Bacterial regulatory proteins, luxR family VAPA_1c45520 PF04545 Sigma-70, region 4 VAPA_1c45520 PF00140 Sigma-70 factor, region 1.2 VAPA_1c45520 PF04542 Sigma-70 region 2 VAPA_1c45530 PF08713 DNA alkylation repair enzyme VAPA_1c45540 PF02630 SCO1/SenC VAPA_1c45550 PF01040 UbiA prenyltransferase family VAPA_1c45600 PF00510 Cytochrome c oxidase subunit III VAPA_1c45620 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 VAPA_1c45640 PF00115 Cytochrome C and Quinol oxidase polypeptide I VAPA_1c45650 PF00116 Cytochrome C oxidase subunit II, periplasmic domain VAPA_1c45650 PF02790 Cytochrome C oxidase subunit II, transmembrane domain VAPA_1c45670 PF08241 Methyltransferase domain VAPA_1c45680 PF00156 Phosphoribosyl transferase domain VAPA_1c45690 PF00588 SpoU rRNA Methylase family VAPA_1c45710 PF01883 Iron-sulfur cluster assembly protein VAPA_1c45710 PF10609 NUBPL iron-transfer P-loop NTPase VAPA_1c45720 PF02525 Flavodoxin-like fold VAPA_1c45730 PF02254 TrkA-N domain VAPA_1c45730 PF00999 Sodium/hydrogen exchanger family VAPA_1c45750 PF00378 Enoyl-CoA hydratase/isomerase VAPA_1c45760 PF07993 Male sterility protein VAPA_1c45760 PF00501 AMP-binding enzyme VAPA_1c45760 PF00550 Phosphopantetheine attachment site VAPA_1c45770 PF00106 short chain dehydrogenase VAPA_1c45780 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_1c45790 PF12806 Acetyl-CoA dehydrogenase C-terminal like VAPA_1c45790 PF02770 Acyl-CoA dehydrogenase, middle domain VAPA_1c45790 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VAPA_1c45790 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VAPA_1c45820 PF06983 3-demethylubiquinone-9 3-methyltransferase VAPA_1c45850 PF07690 Major Facilitator Superfamily VAPA_1c45860 PF07237 Protein of unknown function (DUF1428) VAPA_1c45900 PF02743 Cache domain VAPA_1c45900 PF00211 Adenylate and Guanylate cyclase catalytic domain VAPA_1c45900 PF00672 HAMP domain VAPA_1c45910 PF01137 RNA 3'-terminal phosphate cyclase VAPA_1c45910 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain VAPA_1c45930 PF01139 tRNA-splicing ligase RtcB VAPA_1c45950 PF06956 Regulator of RNA terminal phosphate cyclase VAPA_1c45950 PF00158 Sigma-54 interaction domain VAPA_1c45970 PF12146 Serine aminopeptidase, S33 VAPA_1c45980 PF02423 Ornithine cyclodeaminase/mu-crystallin family VAPA_1c46000 PF17991 Thioredoxin like C-terminal domain VAPA_1c46000 PF02683 Cytochrome C biogenesis protein transmembrane region VAPA_1c46000 PF00578 AhpC/TSA family VAPA_1c46010 PF00512 His Kinase A (phospho-acceptor) domain VAPA_1c46010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAPA_1c46010 PF00672 HAMP domain VAPA_1c46020 PF02566 OsmC-like protein VAPA_1c46030 PF00486 Transcriptional regulatory protein, C terminal VAPA_1c46030 PF00072 Response regulator receiver domain VAPA_1c46050 PF02683 Cytochrome C biogenesis protein transmembrane region VAPA_1c46050 PF00578 AhpC/TSA family VAPA_1c46050 PF17991 Thioredoxin like C-terminal domain VAPA_1c46070 PF00376 MerR family regulatory protein VAPA_1c46070 PF09278 MerR, DNA binding VAPA_1c46090 PF02803 Thiolase, C-terminal domain VAPA_1c46090 PF00108 Thiolase, N-terminal domain VAPA_1c46100 PF01144 Coenzyme A transferase VAPA_1c46110 PF01144 Coenzyme A transferase VAPA_1c46120 PF09339 IclR helix-turn-helix domain VAPA_1c46120 PF01614 Bacterial transcriptional regulator VAPA_1c46130 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_1c46140 PF00072 Response regulator receiver domain VAPA_1c46140 PF00196 Bacterial regulatory proteins, luxR family VAPA_1c46200 PF00263 Bacterial type II and III secretion system protein VAPA_1c46200 PF13629 Pilus formation protein N terminal region VAPA_1c46200 PF04972 BON domain VAPA_1c46220 PF00437 Type II/IV secretion system protein VAPA_1c46300 PF00158 Sigma-54 interaction domain VAPA_1c46300 PF02954 Bacterial regulatory protein, Fis family VAPA_1c46300 PF01590 GAF domain VAPA_1c46320 PF00529 HlyD membrane-fusion protein of T1SS VAPA_1c46320 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VAPA_1c46330 PF00005 ABC transporter VAPA_1c46330 PF03412 Peptidase C39 family VAPA_1c46330 PF00664 ABC transporter transmembrane region VAPA_1c46350 PF01225 Mur ligase family, catalytic domain VAPA_1c46350 PF08245 Mur ligase middle domain VAPA_1c46350 PF02875 Mur ligase family, glutamate ligase domain VAPA_1c46360 PF00691 OmpA family VAPA_1c46390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c46390 PF03466 LysR substrate binding domain VAPA_1c46400 PF00775 Dioxygenase VAPA_1c46400 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal VAPA_1c46420 PF00034 Cytochrome c VAPA_1c46430 PF01434 Peptidase family M41 VAPA_1c46430 PF17862 AAA+ lid domain VAPA_1c46430 PF00004 ATPase family associated with various cellular activities (AAA) VAPA_1c46480 PF04357 TamB, inner membrane protein subunit of TAM complex VAPA_1c46500 PF03466 LysR substrate binding domain VAPA_1c46500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c46520 PF07690 Major Facilitator Superfamily VAPA_1c46550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c46550 PF03466 LysR substrate binding domain VAPA_1c46560 PF00224 Pyruvate kinase, barrel domain VAPA_1c46560 PF02887 Pyruvate kinase, alpha/beta domain VAPA_1c46570 PF08546 Ketopantoate reductase PanE/ApbA C terminal VAPA_1c46570 PF02558 Ketopantoate reductase PanE/ApbA VAPA_1c46590 PF02629 CoA binding domain VAPA_1c46590 PF00549 CoA-ligase VAPA_1c46600 PF00549 CoA-ligase VAPA_1c46600 PF08442 ATP-grasp domain VAPA_1c46620 PF02515 CoA-transferase family III VAPA_1c46630 PF00989 PAS fold VAPA_1c46630 PF00512 His Kinase A (phospho-acceptor) domain VAPA_1c46630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAPA_1c46640 PF02515 CoA-transferase family III VAPA_1c46650 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VAPA_1c46650 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VAPA_1c46650 PF00205 Thiamine pyrophosphate enzyme, central domain VAPA_1c46680 PF01970 Tripartite tricarboxylate transporter TctA family VAPA_1c46740 PF13356 Arm DNA-binding domain VAPA_1c46740 PF00589 Phage integrase family VAPA_1c46790 PF07728 AAA domain (dynein-related subfamily) VAPA_1c46800 PF13569 Domain of unknown function (DUF4132) VAPA_1c46820 PF05762 VWA domain containing CoxE-like protein VAPA_1c46850 PF00144 Beta-lactamase VAPA_1c46970 PF00589 Phage integrase family VAPA_1c46970 PF02899 Phage integrase, N-terminal SAM-like domain VAPA_1c47070 PF00529 HlyD membrane-fusion protein of T1SS VAPA_1c47080 PF00664 ABC transporter transmembrane region VAPA_1c47080 PF00005 ABC transporter VAPA_1c47080 PF03412 Peptidase C39 family VAPA_1c47110 PF01627 Hpt domain VAPA_1c47110 PF00072 Response regulator receiver domain VAPA_1c47110 PF00486 Transcriptional regulatory protein, C terminal VAPA_1c47120 PF00072 Response regulator receiver domain VAPA_1c47120 PF00486 Transcriptional regulatory protein, C terminal VAPA_1c47130 PF00486 Transcriptional regulatory protein, C terminal VAPA_1c47130 PF00072 Response regulator receiver domain VAPA_1c47140 PF02702 Osmosensitive K+ channel His kinase sensor domain VAPA_1c47140 PF13492 GAF domain VAPA_1c47140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAPA_1c47140 PF00512 His Kinase A (phospho-acceptor) domain VAPA_1c47140 PF13493 Domain of unknown function (DUF4118) VAPA_1c47150 PF00593 TonB dependent receptor VAPA_1c47150 PF07715 TonB-dependent Receptor Plug Domain VAPA_1c47160 PF17761 DUF1016 N-terminal domain VAPA_1c47160 PF06250 YhcG PDDEXK nuclease domain VAPA_1c47280 PF16124 RecQ zinc-binding VAPA_1c47280 PF00570 HRDC domain VAPA_1c47280 PF00271 Helicase conserved C-terminal domain VAPA_1c47280 PF00270 DEAD/DEAH box helicase VAPA_1c47280 PF09382 RQC domain VAPA_1c47460 PF01695 IstB-like ATP binding protein VAPA_1c47490 PF12833 Helix-turn-helix domain VAPA_1c47490 PF12852 Cupin VAPA_1c47530 PF01553 Acyltransferase VAPA_1c47540 PF01979 Amidohydrolase family VAPA_1c47550 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain VAPA_1c47550 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain VAPA_1c47560 PF00156 Phosphoribosyl transferase domain VAPA_1c47570 PF03652 Holliday junction resolvase VAPA_1c47580 PF02622 Uncharacterized ACR, COG1678 VAPA_1c47590 PF03441 FAD binding domain of DNA photolyase VAPA_1c47590 PF00875 DNA photolyase VAPA_1c47620 PF01627 Hpt domain VAPA_1c47620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAPA_1c47620 PF01584 CheW-like domain VAPA_1c47620 PF00072 Response regulator receiver domain VAPA_1c47630 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAPA_1c47630 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term VAPA_1c47650 PF00072 Response regulator receiver domain VAPA_1c47660 PF00072 Response regulator receiver domain VAPA_1c47670 PF00301 Rubredoxin VAPA_1c47690 PF00202 Aminotransferase class-III VAPA_1c47700 PF01425 Amidase VAPA_1c47710 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_1c47720 PF03466 LysR substrate binding domain VAPA_1c47720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c47730 PF01808 AICARFT/IMPCHase bienzyme VAPA_1c47730 PF02142 MGS-like domain VAPA_1c47740 PF02954 Bacterial regulatory protein, Fis family VAPA_1c47750 PF01207 Dihydrouridine synthase (Dus) VAPA_1c47760 PF09335 SNARE associated Golgi protein VAPA_1c47790 PF06071 Protein of unknown function (DUF933) VAPA_1c47790 PF01926 50S ribosome-binding GTPase VAPA_1c47800 PF13407 Periplasmic binding protein domain VAPA_1c47810 PF00005 ABC transporter VAPA_1c47820 PF02653 Branched-chain amino acid transport system / permease component VAPA_1c47830 PF00356 Bacterial regulatory proteins, lacI family VAPA_1c47840 PF00294 pfkB family carbohydrate kinase VAPA_1c47850 PF05025 RbsD / FucU transport protein family VAPA_1c47870 PF01494 FAD binding domain VAPA_1c47880 PF10411 Disulfide bond isomerase protein N-terminus VAPA_1c47880 PF13098 Thioredoxin-like domain VAPA_1c47900 PF00378 Enoyl-CoA hydratase/isomerase VAPA_1c47940 PF13532 2OG-Fe(II) oxygenase superfamily VAPA_1c47950 PF00155 Aminotransferase class I and II VAPA_1c47950 PF00392 Bacterial regulatory proteins, gntR family VAPA_1c47970 PF00034 Cytochrome c VAPA_1c47980 PF00034 Cytochrome c VAPA_1c47980 PF13442 Cytochrome C oxidase, cbb3-type, subunit III VAPA_1c48000 PF01545 Cation efflux family VAPA_1c48010 PF05496 Holliday junction DNA helicase RuvB P-loop domain VAPA_1c48010 PF05491 RuvB C-terminal winged helix domain VAPA_1c48010 PF17864 RuvB AAA lid domain VAPA_1c48020 PF01066 CDP-alcohol phosphatidyltransferase VAPA_1c48030 PF12147 Putative methyltransferase VAPA_1c48030 PF12146 Serine aminopeptidase, S33 VAPA_1c48040 PF00782 Dual specificity phosphatase, catalytic domain VAPA_1c48090 PF13545 Crp-like helix-turn-helix domain VAPA_1c48090 PF00027 Cyclic nucleotide-binding domain VAPA_1c48100 PF13609 Gram-negative porin VAPA_1c48110 PF13607 Succinyl-CoA ligase like flavodoxin domain VAPA_1c48110 PF13380 CoA binding domain VAPA_1c48110 PF00583 Acetyltransferase (GNAT) family VAPA_1c48120 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_1c48160 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_1c48170 PF07499 RuvA, C-terminal domain VAPA_1c48170 PF01330 RuvA N terminal domain VAPA_1c48180 PF02562 PhoH-like protein VAPA_1c48190 PF02130 Uncharacterized protein family UPF0054 VAPA_1c48200 PF02580 D-Tyr-tRNA(Tyr) deacylase VAPA_1c48210 PF01545 Cation efflux family VAPA_1c48210 PF16916 Dimerisation domain of Zinc Transporter VAPA_1c48250 PF04225 Opacity-associated protein A LysM-like domain VAPA_1c48250 PF01551 Peptidase family M23 VAPA_1c48260 PF03702 Anhydro-N-acetylmuramic acid kinase VAPA_1c48270 PF07690 Major Facilitator Superfamily VAPA_1c48280 PF01521 Iron-sulphur cluster biosynthesis VAPA_1c48290 PF00380 Ribosomal protein S9/S16 VAPA_1c48300 PF00572 Ribosomal protein L13 VAPA_1c48310 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ VAPA_1c48320 PF03330 Lytic transglycolase VAPA_1c48330 PF02219 Methylenetetrahydrofolate reductase VAPA_1c48340 PF01728 FtsJ-like methyltransferase VAPA_1c48340 PF01479 S4 domain VAPA_1c48350 PF05221 S-adenosyl-L-homocysteine hydrolase VAPA_1c48350 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain VAPA_1c48400 PF03144 Elongation factor Tu domain 2 VAPA_1c48400 PF00009 Elongation factor Tu GTP binding domain VAPA_1c48400 PF16658 Class II release factor RF3, C-terminal domain VAPA_1c48430 PF00005 ABC transporter VAPA_1c48450 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_1c48460 PF00850 Histone deacetylase domain VAPA_1c48470 PF02423 Ornithine cyclodeaminase/mu-crystallin family VAPA_1c48480 PF00155 Aminotransferase class I and II VAPA_1c48480 PF00392 Bacterial regulatory proteins, gntR family VAPA_1c48490 PF00202 Aminotransferase class-III VAPA_1c48500 PF08402 TOBE domain VAPA_1c48500 PF00005 ABC transporter VAPA_1c48520 PF00528 Binding-protein-dependent transport system inner membrane component VAPA_1c48530 PF00528 Binding-protein-dependent transport system inner membrane component VAPA_1c48540 PF00491 Arginase family VAPA_1c48550 PF00171 Aldehyde dehydrogenase family VAPA_1c48560 PF00005 ABC transporter VAPA_1c48560 PF17755 UvrA DNA-binding domain VAPA_1c48560 PF17760 UvrA interaction domain VAPA_1c48600 PF00083 Sugar (and other) transporter VAPA_1c48600 PF08946 Osmosensory transporter coiled coil VAPA_1c48640 PF00682 HMGL-like VAPA_1c48660 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VAPA_1c48660 PF02770 Acyl-CoA dehydrogenase, middle domain VAPA_1c48660 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VAPA_1c48670 PF02515 CoA-transferase family III VAPA_1c48680 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_1c48700 PF01614 Bacterial transcriptional regulator VAPA_1c48700 PF09339 IclR helix-turn-helix domain VAPA_1c48710 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VAPA_1c48730 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain VAPA_1c48730 PF00364 Biotin-requiring enzyme VAPA_1c48730 PF00289 Biotin carboxylase, N-terminal domain VAPA_1c48730 PF02785 Biotin carboxylase C-terminal domain VAPA_1c48750 PF00378 Enoyl-CoA hydratase/isomerase VAPA_1c48760 PF01039 Carboxyl transferase domain VAPA_1c48770 PF00501 AMP-binding enzyme VAPA_1c48770 PF13193 AMP-binding enzyme C-terminal domain VAPA_1c48780 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VAPA_1c48780 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VAPA_1c48780 PF02770 Acyl-CoA dehydrogenase, middle domain VAPA_1c48810 PF13419 Haloacid dehalogenase-like hydrolase VAPA_1c48830 PF00849 RNA pseudouridylate synthase VAPA_1c48860 PF13411 MerR HTH family regulatory protein VAPA_1c48870 PF00484 Carbonic anhydrase VAPA_1c48880 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) VAPA_1c48890 PF00108 Thiolase, N-terminal domain VAPA_1c48890 PF02803 Thiolase, C-terminal domain VAPA_1c48900 PF07687 Peptidase dimerisation domain VAPA_1c48900 PF01546 Peptidase family M20/M25/M40 VAPA_1c48910 PF02770 Acyl-CoA dehydrogenase, middle domain VAPA_1c48910 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VAPA_1c48910 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VAPA_1c48930 PF13667 ThiC-associated domain VAPA_1c48930 PF01964 Radical SAM ThiC family VAPA_1c48970 PF05746 DALR anticodon binding domain VAPA_1c48970 PF02092 Glycyl-tRNA synthetase beta subunit VAPA_1c48980 PF02091 Glycyl-tRNA synthetase alpha subunit VAPA_1c48990 PF00781 Diacylglycerol kinase catalytic domain VAPA_1c49000 PF00149 Calcineurin-like phosphoesterase VAPA_1c49010 PF01569 PAP2 superfamily VAPA_1c49020 PF17763 Glutaminase/Asparaginase C-terminal domain VAPA_1c49020 PF00710 Asparaginase, N-terminal VAPA_1c49050 PF00484 Carbonic anhydrase VAPA_1c49070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c49070 PF03466 LysR substrate binding domain VAPA_1c49080 PF07690 Major Facilitator Superfamily VAPA_1c49120 PF01979 Amidohydrolase family VAPA_1c49130 PF02633 Creatinine amidohydrolase VAPA_1c49150 PF00005 ABC transporter VAPA_1c49160 PF00528 Binding-protein-dependent transport system inner membrane component VAPA_1c49180 PF00795 Carbon-nitrogen hydrolase VAPA_1c49190 PF00571 CBS domain VAPA_1c49190 PF03471 Transporter associated domain VAPA_1c49210 PF01037 Lrp/AsnC ligand binding domain VAPA_1c49220 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VAPA_1c49230 PF00497 Bacterial extracellular solute-binding proteins, family 3 VAPA_1c49240 PF00351 Biopterin-dependent aromatic amino acid hydroxylase VAPA_1c49250 PF13193 AMP-binding enzyme C-terminal domain VAPA_1c49250 PF00501 AMP-binding enzyme VAPA_1c49380 PF13091 PLD-like domain VAPA_1c49400 PF07715 TonB-dependent Receptor Plug Domain VAPA_1c49400 PF00593 TonB dependent receptor VAPA_1c49450 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_1c49470 PF01494 FAD binding domain VAPA_1c49540 PF00202 Aminotransferase class-III VAPA_1c49550 PF00551 Formyl transferase VAPA_1c49570 PF01979 Amidohydrolase family VAPA_1c49580 PF00289 Biotin carboxylase, N-terminal domain VAPA_1c49580 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain VAPA_1c49580 PF02785 Biotin carboxylase C-terminal domain VAPA_1c49590 PF00501 AMP-binding enzyme VAPA_1c49590 PF13193 AMP-binding enzyme C-terminal domain VAPA_1c49610 PF13458 Periplasmic binding protein VAPA_1c49620 PF00067 Cytochrome P450 VAPA_1c49620 PF00258 Flavodoxin VAPA_1c49620 PF00175 Oxidoreductase NAD-binding domain VAPA_1c49620 PF00667 FAD binding domain VAPA_1c49640 PF00440 Bacterial regulatory proteins, tetR family VAPA_1c49670 PF06974 Protein of unknown function (DUF1298) VAPA_1c49670 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain VAPA_1c49680 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain VAPA_1c49680 PF00326 Prolyl oligopeptidase family VAPA_1c49690 PF00491 Arginase family VAPA_1c49740 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase VAPA_1c49740 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain VAPA_1c49770 PF18327 Proline utilization A proline dehydrogenase N-terminal domain VAPA_1c49770 PF00171 Aldehyde dehydrogenase family VAPA_1c49770 PF01619 Proline dehydrogenase VAPA_1c49770 PF14850 DNA-binding domain of Proline dehydrogenase VAPA_1c49780 PF01037 Lrp/AsnC ligand binding domain VAPA_1c49790 PF01168 Alanine racemase, N-terminal domain VAPA_1c49800 PF00437 Type II/IV secretion system protein VAPA_1c49810 PF00437 Type II/IV secretion system protein VAPA_1c49820 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase VAPA_1c49820 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase VAPA_1c49840 PF13580 SIS domain VAPA_1c49850 PF02021 Uncharacterised protein family UPF0102 VAPA_1c49860 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases VAPA_1c49880 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_1c49890 PF00501 AMP-binding enzyme VAPA_1c49890 PF13193 AMP-binding enzyme C-terminal domain VAPA_1c49920 PF02525 Flavodoxin-like fold VAPA_1c49930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c49930 PF03466 LysR substrate binding domain VAPA_1c49940 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_1c50000 PF00440 Bacterial regulatory proteins, tetR family VAPA_1c50000 PF08361 MAATS-type transcriptional repressor, C-terminal region VAPA_1c50010 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VAPA_1c50010 PF00529 HlyD membrane-fusion protein of T1SS VAPA_1c50020 PF00873 AcrB/AcrD/AcrF family VAPA_1c50030 PF02321 Outer membrane efflux protein VAPA_1c50080 PF00296 Luciferase-like monooxygenase VAPA_1c50090 PF00857 Isochorismatase family VAPA_1c50100 PF01042 Endoribonuclease L-PSP VAPA_1c50110 PF00561 alpha/beta hydrolase fold VAPA_1c50120 PF00881 Nitroreductase family VAPA_1c50130 PF01613 Flavin reductase like domain VAPA_1c50140 PF08362 YcdC-like protein, C-terminal region VAPA_1c50140 PF00440 Bacterial regulatory proteins, tetR family VAPA_1c50150 PF14226 non-haem dioxygenase in morphine synthesis N-terminal VAPA_1c50150 PF03171 2OG-Fe(II) oxygenase superfamily VAPA_1c50170 PF02608 ABC transporter substrate-binding protein PnrA-like VAPA_1c50180 PF00005 ABC transporter VAPA_1c50220 PF14226 non-haem dioxygenase in morphine synthesis N-terminal VAPA_1c50220 PF03171 2OG-Fe(II) oxygenase superfamily VAPA_1c50230 PF13416 Bacterial extracellular solute-binding protein VAPA_1c50240 PF00005 ABC transporter VAPA_1c50240 PF08402 TOBE domain VAPA_1c50250 PF00528 Binding-protein-dependent transport system inner membrane component VAPA_1c50260 PF00528 Binding-protein-dependent transport system inner membrane component VAPA_1c50320 PF00085 Thioredoxin VAPA_1c50330 PF00270 DEAD/DEAH box helicase VAPA_1c50330 PF08494 DEAD/H associated VAPA_1c50330 PF00271 Helicase conserved C-terminal domain VAPA_1c50340 PF04675 DNA ligase N terminus VAPA_1c50340 PF01068 ATP dependent DNA ligase domain VAPA_1c50340 PF04679 ATP dependent DNA ligase C terminal region VAPA_1c50350 PF04679 ATP dependent DNA ligase C terminal region VAPA_1c50350 PF01068 ATP dependent DNA ligase domain VAPA_1c50350 PF04675 DNA ligase N terminus VAPA_1c50360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c50360 PF03466 LysR substrate binding domain VAPA_1c50370 PF09663 Amidohydrolase ring-opening protein (Amido_AtzD_TrzD) VAPA_1c50380 PF01494 FAD binding domain VAPA_1c50410 PF00005 ABC transporter VAPA_1c50460 PF02894 Oxidoreductase family, C-terminal alpha/beta domain VAPA_1c50460 PF01408 Oxidoreductase family, NAD-binding Rossmann fold VAPA_1c50470 PF13407 Periplasmic binding protein domain VAPA_1c50480 PF02653 Branched-chain amino acid transport system / permease component VAPA_1c50490 PF00005 ABC transporter VAPA_1c50500 PF00480 ROK family VAPA_1c50500 PF01047 MarR family VAPA_1c50520 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain VAPA_1c50520 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain VAPA_1c50530 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VAPA_1c50530 PF02874 ATP synthase alpha/beta family, beta-barrel domain VAPA_1c50540 PF00231 ATP synthase VAPA_1c50550 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VAPA_1c50550 PF00306 ATP synthase alpha/beta chain, C terminal domain VAPA_1c50550 PF02874 ATP synthase alpha/beta family, beta-barrel domain VAPA_1c50560 PF00213 ATP synthase delta (OSCP) subunit VAPA_1c50570 PF00430 ATP synthase B/B' CF(0) VAPA_1c50580 PF00137 ATP synthase subunit C VAPA_1c50590 PF00119 ATP synthase A chain VAPA_1c50610 PF01063 Amino-transferase class IV VAPA_1c50620 PF04359 Protein of unknown function (DUF493) VAPA_1c50630 PF03099 Biotin/lipoate A/B protein ligase family VAPA_1c50640 PF04055 Radical SAM superfamily VAPA_1c50640 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family VAPA_1c50650 PF07690 Major Facilitator Superfamily VAPA_1c50660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c50660 PF03466 LysR substrate binding domain VAPA_1c50670 PF13193 AMP-binding enzyme C-terminal domain VAPA_1c50670 PF00501 AMP-binding enzyme VAPA_1c50680 PF03600 Citrate transporter VAPA_1c50720 PF16884 N-terminal domain of oxidoreductase VAPA_1c50720 PF00107 Zinc-binding dehydrogenase VAPA_1c50730 PF00672 HAMP domain VAPA_1c50730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAPA_1c50730 PF00512 His Kinase A (phospho-acceptor) domain VAPA_1c50740 PF00072 Response regulator receiver domain VAPA_1c50740 PF00486 Transcriptional regulatory protein, C terminal VAPA_1c50780 PF05524 PEP-utilising enzyme, N-terminal VAPA_1c50780 PF00391 PEP-utilising enzyme, mobile domain VAPA_1c50780 PF02896 PEP-utilising enzyme, TIM barrel domain VAPA_1c50790 PF00381 PTS HPr component phosphorylation site VAPA_1c50810 PF07690 Major Facilitator Superfamily VAPA_1c50830 PF00578 AhpC/TSA family VAPA_1c50850 PF08534 Redoxin VAPA_1c50860 PF00366 Ribosomal protein S17 VAPA_1c50870 PF00831 Ribosomal L29 protein VAPA_1c50880 PF00252 Ribosomal protein L16p/L10e VAPA_1c50890 PF07650 KH domain VAPA_1c50890 PF00189 Ribosomal protein S3, C-terminal domain VAPA_1c50900 PF00237 Ribosomal protein L22p/L17e VAPA_1c50910 PF00203 Ribosomal protein S19 VAPA_1c50920 PF03947 Ribosomal Proteins L2, C-terminal domain VAPA_1c50920 PF00181 Ribosomal Proteins L2, RNA binding domain VAPA_1c50930 PF00276 Ribosomal protein L23 VAPA_1c50940 PF00573 Ribosomal protein L4/L1 family VAPA_1c50950 PF00297 Ribosomal protein L3 VAPA_1c50980 PF00338 Ribosomal protein S10p/S20e VAPA_1c50990 PF00009 Elongation factor Tu GTP binding domain VAPA_1c50990 PF03144 Elongation factor Tu domain 2 VAPA_1c50990 PF03143 Elongation factor Tu C-terminal domain VAPA_1c51000 PF00009 Elongation factor Tu GTP binding domain VAPA_1c51000 PF03764 Elongation factor G, domain IV VAPA_1c51000 PF03144 Elongation factor Tu domain 2 VAPA_1c51000 PF00679 Elongation factor G C-terminus VAPA_1c51000 PF14492 Elongation Factor G, domain II VAPA_1c51010 PF00177 Ribosomal protein S7p/S5e VAPA_1c51020 PF00164 Ribosomal protein S12/S23 VAPA_1c51030 PF07943 Penicillin-binding protein 5, C-terminal domain VAPA_1c51030 PF00768 D-alanyl-D-alanine carboxypeptidase VAPA_1c51040 PF02129 X-Pro dipeptidyl-peptidase (S15 family) VAPA_1c51080 PF00490 Delta-aminolevulinic acid dehydratase VAPA_1c51090 PF01544 CorA-like Mg2+ transporter protein VAPA_1c51110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c51110 PF03466 LysR substrate binding domain VAPA_1c51120 PF01738 Dienelactone hydrolase family VAPA_1c51130 PF01323 DSBA-like thioredoxin domain VAPA_1c51150 PF01914 MarC family integral membrane protein VAPA_1c51180 PF00501 AMP-binding enzyme VAPA_1c51190 PF00005 ABC transporter VAPA_1c51200 PF12399 Branched-chain amino acid ATP-binding cassette transporter VAPA_1c51200 PF00005 ABC transporter VAPA_1c51220 PF02653 Branched-chain amino acid transport system / permease component VAPA_1c51240 PF07859 alpha/beta hydrolase fold VAPA_1c51250 PF02222 ATP-grasp domain VAPA_1c51260 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain VAPA_1c51260 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain VAPA_1c51290 PF03309 Type III pantothenate kinase VAPA_1c51300 PF04972 BON domain VAPA_1c51300 PF01476 LysM domain VAPA_1c51320 PF03480 Bacterial extracellular solute-binding protein, family 7 VAPA_1c51340 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VAPA_1c51340 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VAPA_1c51350 PF02896 PEP-utilising enzyme, TIM barrel domain VAPA_1c51350 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain VAPA_1c51350 PF00391 PEP-utilising enzyme, mobile domain VAPA_1c51370 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VAPA_1c51370 PF07992 Pyridine nucleotide-disulphide oxidoreductase VAPA_1c51380 PF08546 Ketopantoate reductase PanE/ApbA C terminal VAPA_1c51380 PF02558 Ketopantoate reductase PanE/ApbA VAPA_1c51400 PF00528 Binding-protein-dependent transport system inner membrane component VAPA_1c51410 PF00005 ABC transporter VAPA_1c51410 PF12857 TOBE-like domain VAPA_1c51410 PF17850 CysA C-terminal regulatory domain VAPA_1c51450 PF01048 Phosphorylase superfamily VAPA_1c51450 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus VAPA_1c51460 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_1c51480 PF00067 Cytochrome P450 VAPA_1c51500 PF02798 Glutathione S-transferase, N-terminal domain VAPA_1c51510 PF03466 LysR substrate binding domain VAPA_1c51510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c51540 PF00005 ABC transporter VAPA_1c51550 PF01061 ABC-2 type transporter VAPA_1c51560 PF01047 MarR family VAPA_1c51570 PF02566 OsmC-like protein VAPA_1c51590 PF01636 Phosphotransferase enzyme family VAPA_1c51600 PF03466 LysR substrate binding domain VAPA_1c51600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c51610 PF18158 Adaptive response protein AidB N-terminal domain VAPA_1c51610 PF02770 Acyl-CoA dehydrogenase, middle domain VAPA_1c51610 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VAPA_1c51620 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_1c51630 PF02515 CoA-transferase family III VAPA_1c51660 PF00183 Hsp90 protein VAPA_1c51660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAPA_1c51680 PF03466 LysR substrate binding domain VAPA_1c51680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c51700 PF00230 Major intrinsic protein VAPA_1c51720 PF00512 His Kinase A (phospho-acceptor) domain VAPA_1c51720 PF08521 Two-component sensor kinase N-terminal VAPA_1c51720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAPA_1c51730 PF00486 Transcriptional regulatory protein, C terminal VAPA_1c51730 PF00072 Response regulator receiver domain VAPA_1c51750 PF01479 S4 domain VAPA_1c51750 PF00849 RNA pseudouridylate synthase VAPA_1c51760 PF04101 Glycosyltransferase family 28 C-terminal domain VAPA_1c51760 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase VAPA_1c51800 PF00072 Response regulator receiver domain VAPA_1c51800 PF00486 Transcriptional regulatory protein, C terminal VAPA_1c51810 PF00512 His Kinase A (phospho-acceptor) domain VAPA_1c51810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAPA_1c51810 PF13493 Domain of unknown function (DUF4118) VAPA_1c51810 PF02702 Osmosensitive K+ channel His kinase sensor domain VAPA_1c51810 PF13492 GAF domain VAPA_1c51820 PF02669 K+-transporting ATPase, c chain VAPA_1c51840 PF03814 Potassium-transporting ATPase A subunit VAPA_1c51870 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain VAPA_1c51870 PF02777 Iron/manganese superoxide dismutases, C-terminal domain VAPA_1c51890 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_1c51900 PF00753 Metallo-beta-lactamase superfamily VAPA_1c51920 PF00106 short chain dehydrogenase VAPA_1c51940 PF13545 Crp-like helix-turn-helix domain VAPA_1c51940 PF00027 Cyclic nucleotide-binding domain VAPA_1c51950 PF00501 AMP-binding enzyme VAPA_1c51960 PF12399 Branched-chain amino acid ATP-binding cassette transporter VAPA_1c51960 PF00005 ABC transporter VAPA_1c51970 PF02653 Branched-chain amino acid transport system / permease component VAPA_1c52000 PF00005 ABC transporter VAPA_1c52010 PF13193 AMP-binding enzyme C-terminal domain VAPA_1c52010 PF00501 AMP-binding enzyme VAPA_1c52030 PF01965 DJ-1/PfpI family VAPA_1c52060 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_1c52090 PF13442 Cytochrome C oxidase, cbb3-type, subunit III VAPA_1c52090 PF13360 PQQ-like domain VAPA_1c52100 PF02954 Bacterial regulatory protein, Fis family VAPA_1c52100 PF13188 PAS domain VAPA_1c52100 PF00158 Sigma-54 interaction domain VAPA_1c52110 PF01011 PQQ enzyme repeat VAPA_1c52120 PF00480 ROK family VAPA_1c52120 PF01325 Iron dependent repressor, N-terminal DNA binding domain VAPA_1c52130 PF00005 ABC transporter VAPA_1c52140 PF02653 Branched-chain amino acid transport system / permease component VAPA_1c52150 PF13407 Periplasmic binding protein domain VAPA_1c52170 PF00497 Bacterial extracellular solute-binding proteins, family 3 VAPA_1c52180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c52180 PF03466 LysR substrate binding domain VAPA_1c52190 PF00667 FAD binding domain VAPA_1c52190 PF00175 Oxidoreductase NAD-binding domain VAPA_1c52190 PF00258 Flavodoxin VAPA_1c52200 PF07715 TonB-dependent Receptor Plug Domain VAPA_1c52200 PF00593 TonB dependent receptor VAPA_1c52210 PF00676 Dehydrogenase E1 component VAPA_1c52220 PF02779 Transketolase, pyrimidine binding domain VAPA_1c52220 PF02780 Transketolase, C-terminal domain VAPA_1c52250 PF03466 LysR substrate binding domain VAPA_1c52250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c52260 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_1c52290 PF01494 FAD binding domain VAPA_1c52310 PF00378 Enoyl-CoA hydratase/isomerase VAPA_1c52320 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VAPA_1c52320 PF02770 Acyl-CoA dehydrogenase, middle domain VAPA_1c52320 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VAPA_1c52330 PF13193 AMP-binding enzyme C-terminal domain VAPA_1c52330 PF00501 AMP-binding enzyme VAPA_1c52360 PF01196 Ribosomal protein L17 VAPA_1c52370 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain VAPA_1c52370 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain VAPA_1c52370 PF01000 RNA polymerase Rpb3/RpoA insert domain VAPA_1c52380 PF01479 S4 domain VAPA_1c52380 PF00163 Ribosomal protein S4/S9 N-terminal domain VAPA_1c52390 PF00411 Ribosomal protein S11 VAPA_1c52400 PF00416 Ribosomal protein S13/S18 VAPA_1c52410 PF00444 Ribosomal protein L36 VAPA_1c52420 PF00344 SecY translocase VAPA_1c52430 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A VAPA_1c52440 PF00327 Ribosomal protein L30p/L7e VAPA_1c52450 PF03719 Ribosomal protein S5, C-terminal domain VAPA_1c52450 PF00333 Ribosomal protein S5, N-terminal domain VAPA_1c52460 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast VAPA_1c52470 PF00347 Ribosomal protein L6 VAPA_1c52480 PF00410 Ribosomal protein S8 VAPA_1c52490 PF00253 Ribosomal protein S14p/S29e VAPA_1c52500 PF00281 Ribosomal protein L5 VAPA_1c52500 PF00673 ribosomal L5P family C-terminus VAPA_1c52510 PF00467 KOW motif VAPA_1c52510 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 VAPA_1c52520 PF00238 Ribosomal protein L14p/L23e VAPA_1c52540 PF03807 NADP oxidoreductase coenzyme F420-dependent VAPA_1c52540 PF14748 Pyrroline-5-carboxylate reductase dimerisation VAPA_1c52550 PF01040 UbiA prenyltransferase family VAPA_1c52560 PF00210 Ferritin-like domain VAPA_1c52570 PF03466 LysR substrate binding domain VAPA_1c52570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c52580 PF01810 LysE type translocator VAPA_1c52590 PF17191 RecG wedge domain VAPA_1c52590 PF00271 Helicase conserved C-terminal domain VAPA_1c52590 PF00270 DEAD/DEAH box helicase VAPA_1c52600 PF02547 Queuosine biosynthesis protein VAPA_1c52610 PF08450 SMP-30/Gluconolactonase/LRE-like region VAPA_1c52620 PF01702 Queuine tRNA-ribosyltransferase VAPA_1c52730 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family VAPA_1c52760 PF00814 Glycoprotease family VAPA_1c52780 PF00455 DeoR C terminal sensor domain VAPA_1c52780 PF08220 DeoR-like helix-turn-helix domain VAPA_1c52790 PF00293 NUDIX domain VAPA_1c52800 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family VAPA_1c52820 PF01300 Telomere recombination VAPA_1c52820 PF03481 Putative GTP-binding controlling metal-binding VAPA_1c52830 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain VAPA_1c52830 PF02222 ATP-grasp domain VAPA_1c52840 PF00731 AIR carboxylase VAPA_1c52850 PF00085 Thioredoxin VAPA_1c52870 PF01259 SAICAR synthetase VAPA_1c52880 PF01116 Fructose-bisphosphate aldolase class-II VAPA_1c52890 PF01037 Lrp/AsnC ligand binding domain VAPA_1c52900 PF00291 Pyridoxal-phosphate dependent enzyme VAPA_1c52910 PF02887 Pyruvate kinase, alpha/beta domain VAPA_1c52910 PF00224 Pyruvate kinase, barrel domain VAPA_1c52920 PF00162 Phosphoglycerate kinase VAPA_1c52930 PF03466 LysR substrate binding domain VAPA_1c52930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c52960 PF01494 FAD binding domain VAPA_1c53020 PF00551 Formyl transferase VAPA_1c53020 PF02911 Formyl transferase, C-terminal domain VAPA_1c53040 PF01327 Polypeptide deformylase VAPA_1c53060 PF02481 DNA recombination-mediator protein A VAPA_1c53060 PF17782 DprA winged helix domain VAPA_1c53070 PF04361 Protein of unknown function (DUF494) VAPA_1c53090 PF07549 SecD/SecF GG Motif VAPA_1c53090 PF02355 Protein export membrane protein VAPA_1c53100 PF07549 SecD/SecF GG Motif VAPA_1c53100 PF13721 SecD export protein N-terminal TM region VAPA_1c53100 PF02355 Protein export membrane protein VAPA_1c53110 PF02699 Preprotein translocase subunit VAPA_1c53130 PF01037 Lrp/AsnC ligand binding domain VAPA_1c53140 PF00497 Bacterial extracellular solute-binding proteins, family 3 VAPA_1c53150 PF00528 Binding-protein-dependent transport system inner membrane component VAPA_1c53160 PF05977 Transmembrane secretion effector VAPA_1c53180 PF00510 Cytochrome c oxidase subunit III VAPA_1c53200 PF00115 Cytochrome C and Quinol oxidase polypeptide I VAPA_1c53210 PF00116 Cytochrome C oxidase subunit II, periplasmic domain VAPA_1c53230 PF02633 Creatinine amidohydrolase VAPA_1c53240 PF00005 ABC transporter VAPA_1c53250 PF00528 Binding-protein-dependent transport system inner membrane component VAPA_1c53290 PF00175 Oxidoreductase NAD-binding domain VAPA_1c53290 PF00111 2Fe-2S iron-sulfur cluster binding domain VAPA_1c53310 PF01042 Endoribonuclease L-PSP VAPA_1c53330 PF01261 Xylose isomerase-like TIM barrel VAPA_1c53340 PF00596 Class II Aldolase and Adducin N-terminal domain VAPA_1c53350 PF07005 Sugar-binding N-terminal domain VAPA_1c53350 PF17042 Nucleotide-binding C-terminal domain VAPA_1c53360 PF01370 NAD dependent epimerase/dehydratase family VAPA_1c53370 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase VAPA_1c53370 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase VAPA_1c53380 PF07690 Major Facilitator Superfamily VAPA_1c53390 PF00392 Bacterial regulatory proteins, gntR family VAPA_1c53390 PF07729 FCD domain VAPA_1c53400 PF17831 Pyruvate dehydrogenase E1 component middle domain VAPA_1c53400 PF00456 Transketolase, thiamine diphosphate binding domain VAPA_1c53410 PF01037 Lrp/AsnC ligand binding domain VAPA_1c53460 PF00072 Response regulator receiver domain VAPA_1c53460 PF00196 Bacterial regulatory proteins, luxR family VAPA_1c53470 PF00989 PAS fold VAPA_1c53470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAPA_1c53470 PF00512 His Kinase A (phospho-acceptor) domain VAPA_1c53480 PF00795 Carbon-nitrogen hydrolase VAPA_1c53500 PF03710 Glutamate-ammonia ligase adenylyltransferase VAPA_1c53500 PF08335 GlnD PII-uridylyltransferase VAPA_1c53510 PF03330 Lytic transglycolase VAPA_1c53510 PF05036 Sporulation related domain VAPA_1c53520 PF07804 HipA-like C-terminal domain VAPA_1c53530 PF02627 Carboxymuconolactone decarboxylase family VAPA_1c53540 PF08281 Sigma-70, region 4 VAPA_1c53540 PF04542 Sigma-70 region 2 VAPA_1c53540 PF12680 SnoaL-like domain VAPA_1c53560 PF00255 Glutathione peroxidase VAPA_1c53570 PF00043 Glutathione S-transferase, C-terminal domain VAPA_1c53570 PF13417 Glutathione S-transferase, N-terminal domain VAPA_1c53580 PF00206 Lyase VAPA_1c53580 PF08328 Adenylosuccinate lyase C-terminal VAPA_1c53600 PF00593 TonB dependent receptor VAPA_1c53600 PF07660 Secretin and TonB N terminus short domain VAPA_1c53600 PF07715 TonB-dependent Receptor Plug Domain VAPA_1c53610 PF07152 YaeQ protein VAPA_1c53640 PF03741 Integral membrane protein TerC family VAPA_1c53660 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV VAPA_1c53670 PF13181 Tetratricopeptide repeat VAPA_1c53670 PF01435 Peptidase family M48 VAPA_1c53680 PF01967 MoaC family VAPA_1c53700 PF07963 Prokaryotic N-terminal methylation motif VAPA_1c53700 PF00114 Pilin (bacterial filament) VAPA_1c53760 PF05567 Neisseria PilC beta-propeller domain VAPA_1c53780 PF02397 Bacterial sugar transferase VAPA_1c53790 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family VAPA_1c53830 PF08241 Methyltransferase domain VAPA_1c53870 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family VAPA_1c53880 PF00132 Bacterial transferase hexapeptide (six repeats) VAPA_1c53890 PF01408 Oxidoreductase family, NAD-binding Rossmann fold VAPA_1c53890 PF02894 Oxidoreductase family, C-terminal alpha/beta domain VAPA_1c53900 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain VAPA_1c53900 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain VAPA_1c53900 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain VAPA_1c53910 PF02719 Polysaccharide biosynthesis protein VAPA_1c53930 PF07963 Prokaryotic N-terminal methylation motif VAPA_1c53930 PF00114 Pilin (bacterial filament) VAPA_1c53950 PF00211 Adenylate and Guanylate cyclase catalytic domain VAPA_1c53960 PF00498 FHA domain VAPA_1c53980 PF03741 Integral membrane protein TerC family VAPA_1c53990 PF02629 CoA binding domain VAPA_1c53990 PF00549 CoA-ligase VAPA_1c54000 PF00549 CoA-ligase VAPA_1c54000 PF08442 ATP-grasp domain VAPA_1c54010 PF01118 Semialdehyde dehydrogenase, NAD binding domain VAPA_1c54020 PF02631 RecX family VAPA_1c54030 PF00154 recA bacterial DNA recombination protein VAPA_1c54050 PF00072 Response regulator receiver domain VAPA_1c54050 PF00486 Transcriptional regulatory protein, C terminal VAPA_1c54060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAPA_1c54060 PF00512 His Kinase A (phospho-acceptor) domain VAPA_1c54060 PF08521 Two-component sensor kinase N-terminal VAPA_1c54080 PF03099 Biotin/lipoate A/B protein ligase family VAPA_1c54080 PF02237 Biotin protein ligase C terminal domain VAPA_1c54080 PF08279 HTH domain VAPA_1c54100 PF01751 Toprim domain VAPA_1c54100 PF01131 DNA topoisomerase VAPA_1c54110 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_1c54120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c54120 PF03466 LysR substrate binding domain VAPA_1c54130 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_1c54150 PF07722 Peptidase C26 VAPA_1c54170 PF00392 Bacterial regulatory proteins, gntR family VAPA_1c54170 PF00155 Aminotransferase class I and II VAPA_1c54180 PF07690 Major Facilitator Superfamily VAPA_1c54200 PF01176 Translation initiation factor 1A / IF-1 VAPA_1c54210 PF00270 DEAD/DEAH box helicase VAPA_1c54210 PF03880 DbpA RNA binding domain VAPA_1c54210 PF00271 Helicase conserved C-terminal domain VAPA_1c54250 PF07729 FCD domain VAPA_1c54250 PF00392 Bacterial regulatory proteins, gntR family VAPA_1c54260 PF07992 Pyridine nucleotide-disulphide oxidoreductase VAPA_1c54260 PF17806 Sarcosine oxidase A3 domain VAPA_1c54280 PF01266 FAD dependent oxidoreductase VAPA_1c54280 PF05430 S-adenosyl-L-methionine-dependent methyltransferase VAPA_1c54290 PF05544 Proline racemase VAPA_1c54300 PF13458 Periplasmic binding protein VAPA_1c54310 PF00701 Dihydrodipicolinate synthetase family VAPA_1c54320 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_1c54330 PF01546 Peptidase family M20/M25/M40 VAPA_1c54330 PF07687 Peptidase dimerisation domain VAPA_1c54340 PF00202 Aminotransferase class-III VAPA_1c54360 PF00850 Histone deacetylase domain VAPA_1c54370 PF00392 Bacterial regulatory proteins, gntR family VAPA_1c54370 PF07729 FCD domain VAPA_1c54390 PF00850 Histone deacetylase domain VAPA_1c54400 PF00202 Aminotransferase class-III VAPA_1c54410 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VAPA_1c54420 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VAPA_1c54420 PF00005 ABC transporter VAPA_1c54430 PF00528 Binding-protein-dependent transport system inner membrane component VAPA_1c54430 PF12911 N-terminal TM domain of oligopeptide transport permease C VAPA_1c54440 PF00528 Binding-protein-dependent transport system inner membrane component VAPA_1c54450 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VAPA_1c54460 PF00596 Class II Aldolase and Adducin N-terminal domain VAPA_1c54470 PF05726 Pirin C-terminal cupin domain VAPA_1c54470 PF02678 Pirin VAPA_1c54490 PF03466 LysR substrate binding domain VAPA_1c54490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c54500 PF07729 FCD domain VAPA_1c54500 PF00392 Bacterial regulatory proteins, gntR family VAPA_1c54510 PF00528 Binding-protein-dependent transport system inner membrane component VAPA_1c54520 PF00528 Binding-protein-dependent transport system inner membrane component VAPA_1c54530 PF00497 Bacterial extracellular solute-binding proteins, family 3 VAPA_1c54540 PF01063 Amino-transferase class IV VAPA_1c54550 PF00005 ABC transporter VAPA_1c54560 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VAPA_1c54580 PF01425 Amidase VAPA_1c54600 PF05726 Pirin C-terminal cupin domain VAPA_1c54600 PF02678 Pirin VAPA_1c54620 PF16485 Protealysin propeptide VAPA_1c54620 PF02868 Thermolysin metallopeptidase, alpha-helical domain VAPA_1c54620 PF01447 Thermolysin metallopeptidase, catalytic domain VAPA_1c54640 PF01566 Natural resistance-associated macrophage protein VAPA_1c54650 PF03992 Antibiotic biosynthesis monooxygenase VAPA_1c54680 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain VAPA_1c54680 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VAPA_1c54690 PF02779 Transketolase, pyrimidine binding domain VAPA_1c54690 PF02780 Transketolase, C-terminal domain VAPA_1c54690 PF00456 Transketolase, thiamine diphosphate binding domain VAPA_1c54700 PF02675 S-adenosylmethionine decarboxylase VAPA_1c54710 PF00483 Nucleotidyl transferase VAPA_1c54720 PF05195 Aminopeptidase P, N-terminal domain VAPA_1c54720 PF00557 Metallopeptidase family M24 VAPA_1c54730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_1c54730 PF03466 LysR substrate binding domain VAPA_1c54800 PF03949 Malic enzyme, NAD binding domain VAPA_1c54800 PF01515 Phosphate acetyl/butaryl transferase VAPA_1c54800 PF00390 Malic enzyme, N-terminal domain VAPA_1c54810 PF00545 ribonuclease VAPA_1c54840 PF00398 Ribosomal RNA adenine dimethylase VAPA_1c54850 PF09312 SurA N-terminal domain VAPA_1c54850 PF00639 PPIC-type PPIASE domain VAPA_1c54860 PF04453 LPS transport system D VAPA_1c54870 PF01636 Phosphotransferase enzyme family VAPA_1c54880 PF04452 RNA methyltransferase VAPA_1c54910 PF07690 Major Facilitator Superfamily VAPA_1c54920 PF12146 Serine aminopeptidase, S33 VAPA_1c54960 PF00027 Cyclic nucleotide-binding domain VAPA_1c54960 PF00520 Ion transport protein VAPA_1c54970 PF09186 Domain of unknown function (DUF1949) VAPA_1c54970 PF01205 Uncharacterized protein family UPF0029 VAPA_1c54980 PF08241 Methyltransferase domain VAPA_1c54990 PF00561 alpha/beta hydrolase fold VAPA_1c55000 PF01169 Uncharacterized protein family UPF0016 VAPA_1c55010 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) VAPA_1c55020 PF00106 short chain dehydrogenase VAPA_1c55050 PF01380 SIS domain VAPA_1c55050 PF00571 CBS domain VAPA_1c55060 PF02080 TrkA-C domain VAPA_1c55060 PF00999 Sodium/hydrogen exchanger family VAPA_1c55060 PF02254 TrkA-N domain VAPA_1c55080 PF04960 Glutaminase VAPA_1c55080 PF00027 Cyclic nucleotide-binding domain VAPA_1c55080 PF01740 STAS domain VAPA_1c55090 PF10396 GTP-binding protein TrmE N-terminus VAPA_1c55090 PF12631 MnmE helical domain VAPA_1c55090 PF01926 50S ribosome-binding GTPase VAPA_1c55100 PF14849 YidC periplasmic domain VAPA_1c55100 PF02096 60Kd inner membrane protein VAPA_1c55110 PF01809 Putative membrane protein insertion efficiency factor VAPA_1c55120 PF00825 Ribonuclease P VAPA_1c55130 PF00468 Ribosomal protein L34 VAPA_2c00010 PF13614 AAA domain VAPA_2c00020 PF17762 HTH domain found in ParB protein VAPA_2c00020 PF02195 ParB-like nuclease domain VAPA_2c00030 PF01965 DJ-1/PfpI family VAPA_2c00030 PF12833 Helix-turn-helix domain VAPA_2c00040 PF03472 Autoinducer binding domain VAPA_2c00040 PF00196 Bacterial regulatory proteins, luxR family VAPA_2c00050 PF00765 Autoinducer synthase VAPA_2c00060 PF00892 EamA-like transporter family VAPA_2c00070 PF04715 Anthranilate synthase component I, N terminal region VAPA_2c00070 PF00425 chorismate binding enzyme VAPA_2c00070 PF00117 Glutamine amidotransferase class-I VAPA_2c00080 PF01037 Lrp/AsnC ligand binding domain VAPA_2c00080 PF13404 AsnC-type helix-turn-helix domain VAPA_2c00100 PF01850 PIN domain VAPA_2c00140 PF00378 Enoyl-CoA hydratase/isomerase VAPA_2c00150 PF00171 Aldehyde dehydrogenase family VAPA_2c00160 PF00378 Enoyl-CoA hydratase/isomerase VAPA_2c00180 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_2c00190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_2c00190 PF03466 LysR substrate binding domain VAPA_2c00220 PF01965 DJ-1/PfpI family VAPA_2c00260 PF02653 Branched-chain amino acid transport system / permease component VAPA_2c00280 PF00005 ABC transporter VAPA_2c00290 PF00005 ABC transporter VAPA_2c00290 PF09383 NIL domain VAPA_2c00300 PF01425 Amidase VAPA_2c00420 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_2c00430 PF00392 Bacterial regulatory proteins, gntR family VAPA_2c00440 PF02515 CoA-transferase family III VAPA_2c00450 PF00378 Enoyl-CoA hydratase/isomerase VAPA_2c00460 PF00107 Zinc-binding dehydrogenase VAPA_2c00460 PF08240 Alcohol dehydrogenase GroES-like domain VAPA_2c00470 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_2c00490 PF12805 FUSC-like inner membrane protein yccS VAPA_2c00530 PF05336 L-rhamnose mutarotase VAPA_2c00540 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain VAPA_2c00540 PF13378 Enolase C-terminal domain-like VAPA_2c00550 PF00701 Dihydrodipicolinate synthetase family VAPA_2c00590 PF00005 ABC transporter VAPA_2c00600 PF00005 ABC transporter VAPA_2c00640 PF00392 Bacterial regulatory proteins, gntR family VAPA_2c00640 PF07729 FCD domain VAPA_2c00660 PF01266 FAD dependent oxidoreductase VAPA_2c00670 PF01042 Endoribonuclease L-PSP VAPA_2c00680 PF16363 GDP-mannose 4,6 dehydratase VAPA_2c00690 PF04321 RmlD substrate binding domain VAPA_2c00700 PF00483 Nucleotidyl transferase VAPA_2c00710 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase VAPA_2c00730 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_2c00740 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_2c00750 PF13378 Enolase C-terminal domain-like VAPA_2c00760 PF03466 LysR substrate binding domain VAPA_2c00760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_2c00790 PF01638 HxlR-like helix-turn-helix VAPA_2c00860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_2c00860 PF03466 LysR substrate binding domain VAPA_2c00890 PF00793 DAHP synthetase I family VAPA_2c00920 PF07690 Major Facilitator Superfamily VAPA_2c00930 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B VAPA_2c00940 PF01180 Dihydroorotate dehydrogenase VAPA_2c00950 PF01546 Peptidase family M20/M25/M40 VAPA_2c00960 PF01979 Amidohydrolase family VAPA_2c00980 PF00156 Phosphoribosyl transferase domain VAPA_2c01010 PF03551 Transcriptional regulator PadR-like family VAPA_2c01010 PF13847 Methyltransferase domain VAPA_2c01020 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_2c01030 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III VAPA_2c01030 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal VAPA_2c01050 PF00378 Enoyl-CoA hydratase/isomerase VAPA_2c01060 PF00501 AMP-binding enzyme VAPA_2c01060 PF13193 AMP-binding enzyme C-terminal domain VAPA_2c01100 PF13452 N-terminal half of MaoC dehydratase VAPA_2c01140 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_2c01160 PF13193 AMP-binding enzyme C-terminal domain VAPA_2c01160 PF00501 AMP-binding enzyme VAPA_2c01170 PF12852 Cupin VAPA_2c01170 PF12833 Helix-turn-helix domain VAPA_2c01180 PF02515 CoA-transferase family III VAPA_2c01220 PF00535 Glycosyl transferase family 2 VAPA_2c01240 PF00043 Glutathione S-transferase, C-terminal domain VAPA_2c01240 PF02798 Glutathione S-transferase, N-terminal domain VAPA_2c01280 PF00557 Metallopeptidase family M24 VAPA_2c01300 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VAPA_2c01300 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VAPA_2c01310 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_2c01320 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_2c01340 PF00583 Acetyltransferase (GNAT) family VAPA_2c01350 PF16896 Phosphogluconate dehydrogenase (decarboxylating) C-term VAPA_2c01350 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase VAPA_2c01360 PF03480 Bacterial extracellular solute-binding protein, family 7 VAPA_2c01370 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component VAPA_2c01380 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VAPA_2c01390 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain VAPA_2c01390 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain VAPA_2c01400 PF07005 Sugar-binding N-terminal domain VAPA_2c01400 PF17042 Nucleotide-binding C-terminal domain VAPA_2c01410 PF00392 Bacterial regulatory proteins, gntR family VAPA_2c01410 PF07729 FCD domain VAPA_2c01420 PF00180 Isocitrate/isopropylmalate dehydrogenase VAPA_2c01430 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase VAPA_2c01430 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase VAPA_2c01440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_2c01440 PF03466 LysR substrate binding domain VAPA_2c01450 PF04909 Amidohydrolase VAPA_2c01460 PF03737 Aldolase/RraA VAPA_2c01480 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit VAPA_2c01480 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase VAPA_2c01490 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_2c01500 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_2c01530 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VAPA_2c01620 PF12833 Helix-turn-helix domain VAPA_2c01620 PF06719 AraC-type transcriptional regulator N-terminus VAPA_2c01630 PF00793 DAHP synthetase I family VAPA_2c01680 PF03741 Integral membrane protein TerC family VAPA_2c01710 PF04909 Amidohydrolase VAPA_2c01720 PF01842 ACT domain VAPA_2c01720 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VAPA_2c01720 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VAPA_2c01730 PF00356 Bacterial regulatory proteins, lacI family VAPA_2c01740 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VAPA_2c01750 PF03480 Bacterial extracellular solute-binding protein, family 7 VAPA_2c01780 PF03358 NADPH-dependent FMN reductase VAPA_2c01810 PF01557 Fumarylacetoacetate (FAA) hydrolase family VAPA_2c01820 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_2c01840 PF02801 Beta-ketoacyl synthase, C-terminal domain VAPA_2c01840 PF00109 Beta-ketoacyl synthase, N-terminal domain VAPA_2c01840 PF00698 Acyl transferase domain VAPA_2c01840 PF08240 Alcohol dehydrogenase GroES-like domain VAPA_2c01840 PF00550 Phosphopantetheine attachment site VAPA_2c01840 PF16197 Ketoacyl-synthetase C-terminal extension VAPA_2c01840 PF08659 KR domain VAPA_2c01840 PF14765 Polyketide synthase dehydratase VAPA_2c01840 PF00107 Zinc-binding dehydrogenase VAPA_2c01860 PF07729 FCD domain VAPA_2c01860 PF00392 Bacterial regulatory proteins, gntR family VAPA_2c01870 PF00920 Dehydratase family VAPA_2c01880 PF03737 Aldolase/RraA VAPA_2c01890 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_2c01900 PF03033 Glycosyltransferase family 28 N-terminal domain VAPA_2c01900 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase VAPA_2c01910 PF17754 MftR C-terminal domain VAPA_2c01910 PF00440 Bacterial regulatory proteins, tetR family VAPA_2c01930 PF01047 MarR family VAPA_2c01940 PF00111 2Fe-2S iron-sulfur cluster binding domain VAPA_2c01940 PF00175 Oxidoreductase NAD-binding domain VAPA_2c01950 PF00355 Rieske [2Fe-2S] domain VAPA_2c01960 PF07690 Major Facilitator Superfamily VAPA_2c01970 PF00072 Response regulator receiver domain VAPA_2c01970 PF00990 Diguanylate cyclase, GGDEF domain VAPA_2c01980 PF01590 GAF domain VAPA_2c01980 PF00158 Sigma-54 interaction domain VAPA_2c01980 PF02954 Bacterial regulatory protein, Fis family VAPA_2c01990 PF00171 Aldehyde dehydrogenase family VAPA_2c02030 PF07731 Multicopper oxidase VAPA_2c02030 PF07732 Multicopper oxidase VAPA_2c02060 PF00665 Integrase core domain VAPA_2c02070 PF13276 HTH-like domain VAPA_2c02070 PF01527 Transposase VAPA_2c02070 PF00665 Integrase core domain VAPA_2c02070 PF13333 Integrase core domain VAPA_2c02090 PF03527 RHS protein VAPA_2c02090 PF05593 RHS Repeat VAPA_2c02090 PF14220 Domain of unknown function (DUF4329) VAPA_2c02120 PF03527 RHS protein VAPA_2c02150 PF14220 Domain of unknown function (DUF4329) VAPA_2c02150 PF03527 RHS protein VAPA_2c02150 PF05593 RHS Repeat VAPA_2c02160 PF04717 Type VI secretion system, phage-baseplate injector VAPA_2c02170 PF13378 Enolase C-terminal domain-like VAPA_2c02190 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_2c02200 PF00701 Dihydrodipicolinate synthetase family VAPA_2c02210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_2c02210 PF03466 LysR substrate binding domain VAPA_2c02220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_2c02220 PF03466 LysR substrate binding domain VAPA_2c02270 PF13193 AMP-binding enzyme C-terminal domain VAPA_2c02270 PF00501 AMP-binding enzyme VAPA_2c02280 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component VAPA_2c02280 PF03480 Bacterial extracellular solute-binding protein, family 7 VAPA_2c02290 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VAPA_2c02320 PF00135 Carboxylesterase family VAPA_2c02340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_2c02340 PF03466 LysR substrate binding domain VAPA_2c02350 PF01118 Semialdehyde dehydrogenase, NAD binding domain VAPA_2c02370 PF09423 PhoD-like phosphatase VAPA_2c02370 PF16655 PhoD-like phosphatase, N-terminal domain VAPA_2c02380 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_2c02400 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_2c02420 PF00775 Dioxygenase VAPA_2c02420 PF04444 Catechol dioxygenase N terminus VAPA_2c02430 PF02515 CoA-transferase family III VAPA_2c02440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_2c02440 PF03466 LysR substrate binding domain VAPA_2c02460 PF00155 Aminotransferase class I and II VAPA_2c02460 PF00392 Bacterial regulatory proteins, gntR family VAPA_2c02490 PF00293 NUDIX domain VAPA_2c02500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_2c02500 PF03466 LysR substrate binding domain VAPA_2c02510 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_2c02520 PF14031 Putative serine dehydratase domain VAPA_2c02520 PF01168 Alanine racemase, N-terminal domain VAPA_2c02530 PF07969 Amidohydrolase family VAPA_2c02540 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family VAPA_2c02550 PF00376 MerR family regulatory protein VAPA_2c02550 PF09278 MerR, DNA binding VAPA_2c02560 PF00171 Aldehyde dehydrogenase family VAPA_2c02570 PF00180 Isocitrate/isopropylmalate dehydrogenase VAPA_2c02580 PF00005 ABC transporter VAPA_2c02580 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VAPA_2c02590 PF00528 Binding-protein-dependent transport system inner membrane component VAPA_2c02590 PF12911 N-terminal TM domain of oligopeptide transport permease C VAPA_2c02600 PF00528 Binding-protein-dependent transport system inner membrane component VAPA_2c02610 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VAPA_2c02620 PF01266 FAD dependent oxidoreductase VAPA_2c02650 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VAPA_2c02660 PF00202 Aminotransferase class-III VAPA_2c02670 PF01037 Lrp/AsnC ligand binding domain VAPA_2c02690 PF04324 BFD-like [2Fe-2S] binding domain VAPA_2c02690 PF07992 Pyridine nucleotide-disulphide oxidoreductase VAPA_2c02700 PF05690 Thiazole biosynthesis protein ThiG VAPA_2c02700 PF01266 FAD dependent oxidoreductase VAPA_2c02730 PF07690 Major Facilitator Superfamily VAPA_2c02740 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_2c02750 PF01425 Amidase VAPA_2c02760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_2c02760 PF03466 LysR substrate binding domain VAPA_2c02790 PF13085 2Fe-2S iron-sulfur cluster binding domain VAPA_2c02790 PF13183 4Fe-4S dicluster domain VAPA_2c02820 PF00890 FAD binding domain VAPA_2c02820 PF02910 Fumarate reductase flavoprotein C-term VAPA_2c02830 PF05681 Fumarate hydratase (Fumerase) VAPA_2c02830 PF05683 Fumarase C-terminus VAPA_2c02860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_2c02870 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_2c02890 PF00497 Bacterial extracellular solute-binding proteins, family 3 VAPA_2c02900 PF03737 Aldolase/RraA VAPA_2c02900 PF00180 Isocitrate/isopropylmalate dehydrogenase VAPA_2c02910 PF07729 FCD domain VAPA_2c02910 PF00392 Bacterial regulatory proteins, gntR family VAPA_2c02930 PF01134 Glucose inhibited division protein A VAPA_2c02930 PF13932 GidA associated domain VAPA_2c02940 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_2c02950 PF03466 LysR substrate binding domain VAPA_2c02950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_2c02960 PF01042 Endoribonuclease L-PSP VAPA_2c02970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_2c02970 PF03466 LysR substrate binding domain VAPA_2c02990 PF00206 Lyase VAPA_2c02990 PF10397 Adenylosuccinate lyase C-terminus VAPA_2c03000 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_2c03010 PF00206 Lyase VAPA_2c03010 PF10415 Fumarase C C-terminus VAPA_2c03030 PF01037 Lrp/AsnC ligand binding domain VAPA_2c03040 PF03435 Saccharopine dehydrogenase NADP binding domain VAPA_2c03040 PF16653 Saccharopine dehydrogenase C-terminal domain VAPA_2c03050 PF08450 SMP-30/Gluconolactonase/LRE-like region VAPA_2c03060 PF04909 Amidohydrolase VAPA_2c03080 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_2c03090 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VAPA_2c03090 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VAPA_2c03100 PF03737 Aldolase/RraA VAPA_2c03110 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_2c03120 PF04909 Amidohydrolase VAPA_2c03130 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_2c03140 PF03466 LysR substrate binding domain VAPA_2c03140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_2c03170 PF04717 Type VI secretion system, phage-baseplate injector VAPA_2c03280 PF00753 Metallo-beta-lactamase superfamily VAPA_2c03280 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain VAPA_2c03280 PF10996 Beta-Casp domain VAPA_2c03290 PF13426 PAS domain VAPA_2c03290 PF00072 Response regulator receiver domain VAPA_2c03290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAPA_2c03300 PF00486 Transcriptional regulatory protein, C terminal VAPA_2c03300 PF00072 Response regulator receiver domain VAPA_2c03310 PF08240 Alcohol dehydrogenase GroES-like domain VAPA_2c03310 PF00107 Zinc-binding dehydrogenase VAPA_2c03330 PF00582 Universal stress protein family VAPA_2c03340 PF00582 Universal stress protein family VAPA_2c03350 PF13607 Succinyl-CoA ligase like flavodoxin domain VAPA_2c03350 PF13380 CoA binding domain VAPA_2c03350 PF00583 Acetyltransferase (GNAT) family VAPA_2c03370 PF13180 PDZ domain VAPA_2c03390 PF00582 Universal stress protein family VAPA_2c03430 PF08240 Alcohol dehydrogenase GroES-like domain VAPA_2c03460 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain VAPA_2c03460 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain VAPA_2c03470 PF00027 Cyclic nucleotide-binding domain VAPA_2c03470 PF00325 Bacterial regulatory proteins, crp family VAPA_2c03510 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) VAPA_2c03520 PF00004 ATPase family associated with various cellular activities (AAA) VAPA_2c03520 PF05362 Lon protease (S16) C-terminal proteolytic domain VAPA_2c03520 PF02190 ATP-dependent protease La (LON) substrate-binding domain VAPA_2c03530 PF00118 TCP-1/cpn60 chaperonin family VAPA_2c03570 PF00501 AMP-binding enzyme VAPA_2c03630 PF00005 ABC transporter VAPA_2c03640 PF00005 ABC transporter VAPA_2c03640 PF12399 Branched-chain amino acid ATP-binding cassette transporter VAPA_2c03660 PF02653 Branched-chain amino acid transport system / permease component VAPA_2c03690 PF05721 Phytanoyl-CoA dioxygenase (PhyH) VAPA_2c03700 PF13193 AMP-binding enzyme C-terminal domain VAPA_2c03700 PF00501 AMP-binding enzyme VAPA_2c03710 PF05721 Phytanoyl-CoA dioxygenase (PhyH) VAPA_2c03740 PF00392 Bacterial regulatory proteins, gntR family VAPA_2c03740 PF07729 FCD domain VAPA_2c03750 PF09084 NMT1/THI5 like VAPA_2c03760 PF00005 ABC transporter VAPA_2c03770 PF00528 Binding-protein-dependent transport system inner membrane component VAPA_2c03780 PF00282 Pyridoxal-dependent decarboxylase conserved domain VAPA_2c03790 PF00512 His Kinase A (phospho-acceptor) domain VAPA_2c03790 PF08521 Two-component sensor kinase N-terminal VAPA_2c03790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAPA_2c03800 PF00072 Response regulator receiver domain VAPA_2c03800 PF00486 Transcriptional regulatory protein, C terminal VAPA_2c03830 PF00753 Metallo-beta-lactamase superfamily VAPA_2c03840 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain VAPA_2c03840 PF00591 Glycosyl transferase family, a/b domain VAPA_2c03840 PF02885 Glycosyl transferase family, helical bundle domain VAPA_2c03860 PF00690 Cation transporter/ATPase, N-terminus VAPA_2c03860 PF00689 Cation transporting ATPase, C-terminus VAPA_2c03880 PF13533 Biotin-lipoyl like VAPA_2c03890 PF02687 FtsX-like permease family VAPA_2c03890 PF12704 MacB-like periplasmic core domain VAPA_2c03900 PF00005 ABC transporter VAPA_2c03950 PF02321 Outer membrane efflux protein VAPA_2c03960 PF13533 Biotin-lipoyl like VAPA_2c03970 PF00005 ABC transporter VAPA_2c04030 PF00690 Cation transporter/ATPase, N-terminus VAPA_2c04030 PF00689 Cation transporting ATPase, C-terminus VAPA_2c04050 PF09086 Domain of unknown function (DUF1924) VAPA_2c04070 PF01292 Prokaryotic cytochrome b561 VAPA_2c04080 PF00486 Transcriptional regulatory protein, C terminal VAPA_2c04080 PF00072 Response regulator receiver domain VAPA_2c04090 PF00512 His Kinase A (phospho-acceptor) domain VAPA_2c04090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAPA_2c04090 PF08521 Two-component sensor kinase N-terminal VAPA_2c04110 PF14716 Helix-hairpin-helix domain VAPA_2c04110 PF02811 PHP domain VAPA_2c04110 PF14791 DNA polymerase beta thumb VAPA_2c04120 PF00364 Biotin-requiring enzyme VAPA_2c04120 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) VAPA_2c04120 PF02817 e3 binding domain VAPA_2c04140 PF00364 Biotin-requiring enzyme VAPA_2c04140 PF00561 alpha/beta hydrolase fold VAPA_2c04150 PF02779 Transketolase, pyrimidine binding domain VAPA_2c04150 PF02780 Transketolase, C-terminal domain VAPA_2c04160 PF00676 Dehydrogenase E1 component VAPA_2c04170 PF01738 Dienelactone hydrolase family VAPA_2c04170 PF00156 Phosphoribosyl transferase domain VAPA_2c04180 PF01738 Dienelactone hydrolase family VAPA_2c04180 PF00156 Phosphoribosyl transferase domain VAPA_2c04190 PF00156 Phosphoribosyl transferase domain VAPA_2c04190 PF05139 Erythromycin esterase VAPA_2c04270 PF00571 CBS domain VAPA_2c04290 PF09587 Bacterial capsule synthesis protein PGA_cap VAPA_2c04300 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family VAPA_2c04300 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain VAPA_2c04320 PF00107 Zinc-binding dehydrogenase VAPA_2c04320 PF08240 Alcohol dehydrogenase GroES-like domain VAPA_2c04360 PF00293 NUDIX domain VAPA_2c04400 PF01883 Iron-sulfur cluster assembly protein VAPA_2c04410 PF02082 Transcriptional regulator VAPA_2c04420 PF00115 Cytochrome C and Quinol oxidase polypeptide I VAPA_2c04460 PF00881 Nitroreductase family VAPA_2c04470 PF00317 Ribonucleotide reductase, all-alpha domain VAPA_2c04470 PF02867 Ribonucleotide reductase, barrel domain VAPA_2c04470 PF03477 ATP cone domain VAPA_2c04480 PF03060 Nitronate monooxygenase VAPA_2c04490 PF00484 Carbonic anhydrase VAPA_2c04510 PF02665 Nitrate reductase gamma subunit VAPA_2c04520 PF02613 Nitrate reductase delta subunit VAPA_2c04530 PF13247 4Fe-4S dicluster domain VAPA_2c04530 PF14711 Respiratory nitrate reductase beta C-terminal VAPA_2c04540 PF01568 Molydopterin dinucleotide binding domain VAPA_2c04540 PF00384 Molybdopterin oxidoreductase VAPA_2c04540 PF14710 Respiratory nitrate reductase alpha N-terminal VAPA_2c04550 PF07690 Major Facilitator Superfamily VAPA_2c04560 PF07690 Major Facilitator Superfamily VAPA_2c04570 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 VAPA_2c04570 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) VAPA_2c04620 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain VAPA_2c04620 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain VAPA_2c04630 PF00005 ABC transporter VAPA_2c04630 PF02687 FtsX-like permease family VAPA_2c04630 PF12704 MacB-like periplasmic core domain VAPA_2c04660 PF00011 Hsp20/alpha crystallin family VAPA_2c04680 PF01738 Dienelactone hydrolase family VAPA_2c04680 PF00156 Phosphoribosyl transferase domain VAPA_2c04750 PF00582 Universal stress protein family VAPA_2c04760 PF00561 alpha/beta hydrolase fold VAPA_2c04760 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus VAPA_2c04770 PF00690 Cation transporter/ATPase, N-terminus VAPA_2c04770 PF00689 Cation transporting ATPase, C-terminus VAPA_2c04790 PF01699 Sodium/calcium exchanger protein VAPA_2c04810 PF04972 BON domain VAPA_2c04820 PF00108 Thiolase, N-terminal domain VAPA_2c04820 PF02803 Thiolase, C-terminal domain VAPA_2c04850 PF14572 Phosphoribosyl synthetase-associated domain VAPA_2c04850 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase VAPA_2c04860 PF01434 Peptidase family M41 VAPA_2c04860 PF17862 AAA+ lid domain VAPA_2c04860 PF00004 ATPase family associated with various cellular activities (AAA) VAPA_2c04890 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain VAPA_2c04890 PF00391 PEP-utilising enzyme, mobile domain VAPA_2c04890 PF02896 PEP-utilising enzyme, TIM barrel domain VAPA_2c04910 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase VAPA_2c04910 PF14572 Phosphoribosyl synthetase-associated domain VAPA_2c04950 PF07992 Pyridine nucleotide-disulphide oxidoreductase VAPA_2c04960 PF02321 Outer membrane efflux protein VAPA_2c04980 PF00873 AcrB/AcrD/AcrF family VAPA_2c04990 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VAPA_2c05000 PF01022 Bacterial regulatory protein, arsR family VAPA_2c05070 PF01389 OmpA-like transmembrane domain VAPA_2c05070 PF00691 OmpA family VAPA_2c05080 PF13018 Extended Signal Peptide of Type V secretion system VAPA_2c05080 PF05658 Head domain of trimeric autotransporter adhesin VAPA_2c05080 PF03895 YadA-like membrane anchor domain VAPA_2c05080 PF05662 Coiled stalk of trimeric autotransporter adhesin VAPA_2c05090 PF03895 YadA-like membrane anchor domain VAPA_2c05090 PF05658 Head domain of trimeric autotransporter adhesin VAPA_2c05090 PF05662 Coiled stalk of trimeric autotransporter adhesin VAPA_2c05090 PF13018 Extended Signal Peptide of Type V secretion system VAPA_2c05140 PF00679 Elongation factor G C-terminus VAPA_2c05140 PF03764 Elongation factor G, domain IV VAPA_2c05140 PF14492 Elongation Factor G, domain II VAPA_2c05140 PF00009 Elongation factor Tu GTP binding domain VAPA_2c05150 PF00384 Molybdopterin oxidoreductase VAPA_2c05150 PF01568 Molydopterin dinucleotide binding domain VAPA_2c05160 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_2c05200 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain VAPA_2c05200 PF13378 Enolase C-terminal domain-like VAPA_2c05220 PF00528 Binding-protein-dependent transport system inner membrane component VAPA_2c05230 PF00005 ABC transporter VAPA_2c05250 PF00732 GMC oxidoreductase VAPA_2c05250 PF05199 GMC oxidoreductase VAPA_2c05320 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit VAPA_2c05330 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit VAPA_2c05340 PF00361 Proton-conducting membrane transporter VAPA_2c05360 PF00146 NADH dehydrogenase VAPA_2c05370 PF00361 Proton-conducting membrane transporter VAPA_2c05380 PF17284 Spermidine synthase tetramerisation domain VAPA_2c05400 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit VAPA_2c05410 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit VAPA_2c05410 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit VAPA_2c05410 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit VAPA_2c05420 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus VAPA_2c05420 PF00361 Proton-conducting membrane transporter VAPA_2c05450 PF00361 Proton-conducting membrane transporter VAPA_2c05490 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain VAPA_2c05490 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain VAPA_2c05500 PF02515 CoA-transferase family III VAPA_2c05510 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_2c05600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_2c05600 PF03466 LysR substrate binding domain VAPA_2c05610 PF00296 Luciferase-like monooxygenase VAPA_2c05620 PF01613 Flavin reductase like domain VAPA_2c05630 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VAPA_2c05630 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VAPA_2c05630 PF02770 Acyl-CoA dehydrogenase, middle domain VAPA_2c05640 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VAPA_2c05640 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VAPA_2c05640 PF02770 Acyl-CoA dehydrogenase, middle domain VAPA_2c05650 PF00378 Enoyl-CoA hydratase/isomerase VAPA_2c05660 PF13380 CoA binding domain VAPA_2c05660 PF13607 Succinyl-CoA ligase like flavodoxin domain VAPA_2c05660 PF00583 Acetyltransferase (GNAT) family VAPA_2c05690 PF13577 SnoaL-like domain VAPA_2c05710 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_2c05720 PF01638 HxlR-like helix-turn-helix VAPA_2c05750 PF12833 Helix-turn-helix domain VAPA_2c05750 PF06719 AraC-type transcriptional regulator N-terminus VAPA_2c05760 PF10518 TAT (twin-arginine translocation) pathway signal sequence VAPA_2c05760 PF01799 [2Fe-2S] binding domain VAPA_2c05760 PF00111 2Fe-2S iron-sulfur cluster binding domain VAPA_2c05770 PF03450 CO dehydrogenase flavoprotein C-terminal domain VAPA_2c05770 PF00941 FAD binding domain in molybdopterin dehydrogenase VAPA_2c05780 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain VAPA_2c05780 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase VAPA_2c05790 PF04303 PrpF protein VAPA_2c05810 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_2c05820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_2c05820 PF03466 LysR substrate binding domain VAPA_2c05830 PF00375 Sodium:dicarboxylate symporter family VAPA_2c05840 PF10397 Adenylosuccinate lyase C-terminus VAPA_2c05840 PF00206 Lyase VAPA_2c05850 PF03328 HpcH/HpaI aldolase/citrate lyase family VAPA_2c05860 PF02515 CoA-transferase family III VAPA_2c05900 PF13847 Methyltransferase domain VAPA_2c05930 PF00989 PAS fold VAPA_2c05930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAPA_2c05930 PF00512 His Kinase A (phospho-acceptor) domain VAPA_2c05930 PF16736 Single Cache-like VAPA_2c05940 PF00158 Sigma-54 interaction domain VAPA_2c05940 PF02954 Bacterial regulatory protein, Fis family VAPA_2c05940 PF00072 Response regulator receiver domain VAPA_2c05970 PF07519 Tannase and feruloyl esterase VAPA_2c05990 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster VAPA_2c05990 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region VAPA_2c05990 PF07992 Pyridine nucleotide-disulphide oxidoreductase VAPA_2c06000 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II VAPA_2c06000 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg VAPA_2c06000 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase VAPA_2c06020 PF00571 CBS domain VAPA_2c06070 PF17871 AAA lid domain VAPA_2c06070 PF10431 C-terminal, D2-small domain, of ClpB protein VAPA_2c06070 PF07724 AAA domain (Cdc48 subfamily) VAPA_2c06070 PF02861 Clp amino terminal domain, pathogenicity island component VAPA_2c06070 PF00004 ATPase family associated with various cellular activities (AAA) VAPA_2c06080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAPA_2c06080 PF00512 His Kinase A (phospho-acceptor) domain VAPA_2c06110 PF00501 AMP-binding enzyme VAPA_2c06110 PF00668 Condensation domain VAPA_2c06110 PF00550 Phosphopantetheine attachment site VAPA_2c06110 PF13193 AMP-binding enzyme C-terminal domain VAPA_2c06130 PF00005 ABC transporter VAPA_2c06130 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VAPA_2c06140 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VAPA_2c06140 PF00005 ABC transporter VAPA_2c06150 PF00528 Binding-protein-dependent transport system inner membrane component VAPA_2c06150 PF12911 N-terminal TM domain of oligopeptide transport permease C VAPA_2c06160 PF00528 Binding-protein-dependent transport system inner membrane component VAPA_2c06180 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VAPA_2c06210 PF00813 FliP family VAPA_2c06230 PF00771 FHIPEP family VAPA_2c06240 PF01313 Bacterial export proteins, family 3 VAPA_2c06290 PF01514 Secretory protein of YscJ/FliF family VAPA_2c06320 PF02874 ATP synthase alpha/beta family, beta-barrel domain VAPA_2c06320 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VAPA_2c06320 PF18269 T3SS EscN ATPase C-terminal domain VAPA_2c06340 PF01311 Bacterial export proteins, family 1 VAPA_2c06350 PF01312 FlhB HrpN YscU SpaS Family VAPA_2c06370 PF00072 Response regulator receiver domain VAPA_2c06370 PF00196 Bacterial regulatory proteins, luxR family VAPA_2c06400 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_2c06510 PF00175 Oxidoreductase NAD-binding domain VAPA_2c06510 PF00258 Flavodoxin VAPA_2c06510 PF00667 FAD binding domain VAPA_2c06520 PF02424 ApbE family VAPA_2c06530 PF00072 Response regulator receiver domain VAPA_2c06530 PF02954 Bacterial regulatory protein, Fis family VAPA_2c06530 PF00158 Sigma-54 interaction domain VAPA_2c06540 PF02743 Cache domain VAPA_2c06540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAPA_2c06540 PF00512 His Kinase A (phospho-acceptor) domain VAPA_2c06560 PF00106 short chain dehydrogenase VAPA_2c06570 PF00108 Thiolase, N-terminal domain VAPA_2c06570 PF02803 Thiolase, C-terminal domain VAPA_2c06580 PF00375 Sodium:dicarboxylate symporter family VAPA_2c06590 PF00561 alpha/beta hydrolase fold VAPA_2c06610 PF05336 L-rhamnose mutarotase VAPA_2c06630 PF13378 Enolase C-terminal domain-like VAPA_2c06630 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain VAPA_2c06660 PF02653 Branched-chain amino acid transport system / permease component VAPA_2c06670 PF00005 ABC transporter VAPA_2c06690 PF00392 Bacterial regulatory proteins, gntR family VAPA_2c06690 PF07729 FCD domain VAPA_2c06730 PF00211 Adenylate and Guanylate cyclase catalytic domain VAPA_2c06740 PF07729 FCD domain VAPA_2c06740 PF00392 Bacterial regulatory proteins, gntR family VAPA_2c06750 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_2c06770 PF01494 FAD binding domain VAPA_2c06800 PF09339 IclR helix-turn-helix domain VAPA_2c06800 PF01614 Bacterial transcriptional regulator VAPA_2c06810 PF13193 AMP-binding enzyme C-terminal domain VAPA_2c06810 PF00501 AMP-binding enzyme VAPA_2c06820 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_2c06830 PF00378 Enoyl-CoA hydratase/isomerase VAPA_2c06850 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_2c06860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_2c06860 PF03466 LysR substrate binding domain VAPA_2c06870 PF00455 DeoR C terminal sensor domain VAPA_2c06870 PF08220 DeoR-like helix-turn-helix domain VAPA_2c06880 PF01791 DeoC/LacD family aldolase VAPA_2c06890 PF00171 Aldehyde dehydrogenase family VAPA_2c06900 PF05025 RbsD / FucU transport protein family VAPA_2c06910 PF00294 pfkB family carbohydrate kinase VAPA_2c06920 PF02653 Branched-chain amino acid transport system / permease component VAPA_2c06930 PF13407 Periplasmic binding protein domain VAPA_2c06940 PF00005 ABC transporter VAPA_2c06950 PF02653 Branched-chain amino acid transport system / permease component VAPA_2c06980 PF00724 NADH:flavin oxidoreductase / NADH oxidase family VAPA_2c07000 PF00005 ABC transporter VAPA_2c07010 PF00005 ABC transporter VAPA_2c07010 PF12399 Branched-chain amino acid ATP-binding cassette transporter VAPA_2c07030 PF13458 Periplasmic binding protein VAPA_2c07090 PF01425 Amidase VAPA_2c07110 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VAPA_2c07130 PF03480 Bacterial extracellular solute-binding protein, family 7 VAPA_2c07150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_2c07150 PF03466 LysR substrate binding domain VAPA_2c07170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_2c07170 PF03466 LysR substrate binding domain VAPA_2c07190 PF00072 Response regulator receiver domain VAPA_2c07190 PF00486 Transcriptional regulatory protein, C terminal VAPA_2c07200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAPA_2c07200 PF00512 His Kinase A (phospho-acceptor) domain VAPA_2c07200 PF00672 HAMP domain VAPA_2c07210 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VAPA_2c07210 PF00529 HlyD membrane-fusion protein of T1SS VAPA_2c07220 PF00873 AcrB/AcrD/AcrF family VAPA_2c07230 PF02321 Outer membrane efflux protein VAPA_2c07270 PF00005 ABC transporter VAPA_2c07280 PF00528 Binding-protein-dependent transport system inner membrane component VAPA_2c07290 PF00528 Binding-protein-dependent transport system inner membrane component VAPA_2c07300 PF00106 short chain dehydrogenase VAPA_2c07310 PF03746 LamB/YcsF family VAPA_2c07330 PF02626 Carboxyltransferase domain, subdomain A and B VAPA_2c07340 PF02682 Carboxyltransferase domain, subdomain C and D VAPA_2c07350 PF02785 Biotin carboxylase C-terminal domain VAPA_2c07350 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain VAPA_2c07350 PF00289 Biotin carboxylase, N-terminal domain VAPA_2c07360 PF00364 Biotin-requiring enzyme VAPA_2c07370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_2c07370 PF03466 LysR substrate binding domain VAPA_2c07390 PF03737 Aldolase/RraA VAPA_2c07470 PF17287 POTRA domain VAPA_2c07470 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB VAPA_2c07470 PF08479 POTRA domain, ShlB-type VAPA_2c07530 PF12833 Helix-turn-helix domain VAPA_2c07530 PF12852 Cupin VAPA_2c07550 PF00654 Voltage gated chloride channel VAPA_2c07570 PF00571 CBS domain VAPA_2c07600 PF00970 Oxidoreductase FAD-binding domain VAPA_2c07600 PF00042 Globin VAPA_2c07600 PF00175 Oxidoreductase NAD-binding domain VAPA_2c07610 PF02954 Bacterial regulatory protein, Fis family VAPA_2c07610 PF00158 Sigma-54 interaction domain VAPA_2c07620 PF04909 Amidohydrolase VAPA_2c07630 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_2c07650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_2c07650 PF03466 LysR substrate binding domain VAPA_2c07660 PF00034 Cytochrome c VAPA_2c07670 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase VAPA_2c07680 PF00111 2Fe-2S iron-sulfur cluster binding domain VAPA_2c07680 PF01799 [2Fe-2S] binding domain VAPA_2c07690 PF00672 HAMP domain VAPA_2c07690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAPA_2c07690 PF00512 His Kinase A (phospho-acceptor) domain VAPA_2c07690 PF01627 Hpt domain VAPA_2c07690 PF00072 Response regulator receiver domain VAPA_2c07700 PF00196 Bacterial regulatory proteins, luxR family VAPA_2c07700 PF00072 Response regulator receiver domain VAPA_2c07710 PF05860 haemagglutination activity domain VAPA_2c07730 PF01527 Transposase VAPA_2c07780 PF07690 Major Facilitator Superfamily VAPA_2c07790 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_2c07800 PF00355 Rieske [2Fe-2S] domain VAPA_2c07840 PF05114 Protein of unknown function (DUF692) VAPA_2c07860 PF07995 Glucose / Sorbosone dehydrogenase VAPA_2c07890 PF00529 HlyD membrane-fusion protein of T1SS VAPA_2c07890 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VAPA_2c07900 PF00873 AcrB/AcrD/AcrF family VAPA_2c07920 PF04304 Protein of unknown function (DUF454) VAPA_2c07970 PF03741 Integral membrane protein TerC family VAPA_2c07980 PF00512 His Kinase A (phospho-acceptor) domain VAPA_2c07980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAPA_2c07990 PF00072 Response regulator receiver domain VAPA_2c07990 PF00486 Transcriptional regulatory protein, C terminal VAPA_2c08000 PF07729 FCD domain VAPA_2c08000 PF00392 Bacterial regulatory proteins, gntR family VAPA_2c08010 PF02423 Ornithine cyclodeaminase/mu-crystallin family VAPA_2c08030 PF00175 Oxidoreductase NAD-binding domain VAPA_2c08030 PF00111 2Fe-2S iron-sulfur cluster binding domain VAPA_2c08030 PF00970 Oxidoreductase FAD-binding domain VAPA_2c08070 PF00171 Aldehyde dehydrogenase family VAPA_2c08080 PF03928 Haem-degrading VAPA_2c08090 PF00111 2Fe-2S iron-sulfur cluster binding domain VAPA_2c08090 PF00970 Oxidoreductase FAD-binding domain VAPA_2c08090 PF00175 Oxidoreductase NAD-binding domain VAPA_2c08110 PF00857 Isochorismatase family VAPA_2c08120 PF00528 Binding-protein-dependent transport system inner membrane component VAPA_2c08130 PF00005 ABC transporter VAPA_2c08160 PF07519 Tannase and feruloyl esterase VAPA_2c08190 PF00665 Integrase core domain VAPA_2c08190 PF13276 HTH-like domain VAPA_2c08190 PF01527 Transposase VAPA_2c08190 PF13333 Integrase core domain VAPA_2c08230 PF02374 Anion-transporting ATPase VAPA_2c08250 PF03747 ADP-ribosylglycohydrolase VAPA_2c08260 PF01467 Cytidylyltransferase-like VAPA_2c08260 PF00293 NUDIX domain VAPA_2c08270 PF00795 Carbon-nitrogen hydrolase VAPA_2c08270 PF02540 NAD synthase VAPA_2c08280 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain VAPA_2c08280 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family VAPA_2c08360 PF03466 LysR substrate binding domain VAPA_2c08360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_2c08380 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_2c08390 PF01738 Dienelactone hydrolase family VAPA_2c08400 PF01613 Flavin reductase like domain VAPA_2c08430 PF14525 AraC-binding-like domain VAPA_2c08430 PF12833 Helix-turn-helix domain VAPA_2c08440 PF00107 Zinc-binding dehydrogenase VAPA_2c08440 PF08240 Alcohol dehydrogenase GroES-like domain VAPA_2c08450 PF00171 Aldehyde dehydrogenase family VAPA_2c08460 PF00561 alpha/beta hydrolase fold VAPA_2c08510 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_2c08520 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VAPA_2c08520 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VAPA_2c08530 PF13193 AMP-binding enzyme C-terminal domain VAPA_2c08530 PF00501 AMP-binding enzyme VAPA_2c08530 PF16177 Acetyl-coenzyme A synthetase N-terminus VAPA_2c08560 PF00158 Sigma-54 interaction domain VAPA_2c08560 PF13426 PAS domain VAPA_2c08560 PF02954 Bacterial regulatory protein, Fis family VAPA_2c08570 PF12706 Beta-lactamase superfamily domain VAPA_2c08580 PF12801 4Fe-4S binding domain VAPA_2c08580 PF04205 FMN-binding domain VAPA_2c08640 PF02627 Carboxymuconolactone decarboxylase family VAPA_2c08680 PF05199 GMC oxidoreductase VAPA_2c08680 PF00732 GMC oxidoreductase VAPA_2c08690 PF00034 Cytochrome c VAPA_2c08700 PF00196 Bacterial regulatory proteins, luxR family VAPA_2c08710 PF00196 Bacterial regulatory proteins, luxR family VAPA_2c08720 PF00072 Response regulator receiver domain VAPA_2c08720 PF00196 Bacterial regulatory proteins, luxR family VAPA_2c08730 PF00072 Response regulator receiver domain VAPA_2c08730 PF00196 Bacterial regulatory proteins, luxR family VAPA_2c08770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAPA_2c08770 PF00072 Response regulator receiver domain VAPA_2c08770 PF00512 His Kinase A (phospho-acceptor) domain VAPA_2c08770 PF09456 RcsC Alpha-Beta-Loop (ABL) VAPA_2c08790 PF00196 Bacterial regulatory proteins, luxR family VAPA_2c08800 PF03466 LysR substrate binding domain VAPA_2c08800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_2c08810 PF00561 alpha/beta hydrolase fold VAPA_2c08830 PF01738 Dienelactone hydrolase family VAPA_2c08850 PF13409 Glutathione S-transferase, N-terminal domain VAPA_2c08860 PF01425 Amidase VAPA_2c08870 PF03301 Tryptophan 2,3-dioxygenase VAPA_2c08890 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VAPA_2c08900 PF03358 NADPH-dependent FMN reductase VAPA_2c08910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_2c08910 PF03466 LysR substrate binding domain VAPA_2c08950 PF09411 Lipid A 3-O-deacylase (PagL) VAPA_2c08960 PF02311 AraC-like ligand binding domain VAPA_2c08960 PF12833 Helix-turn-helix domain VAPA_2c08970 PF07690 Major Facilitator Superfamily VAPA_2c08980 PF00043 Glutathione S-transferase, C-terminal domain VAPA_2c08980 PF02798 Glutathione S-transferase, N-terminal domain VAPA_2c09000 PF03358 NADPH-dependent FMN reductase VAPA_2c09040 PF00043 Glutathione S-transferase, C-terminal domain VAPA_2c09040 PF02798 Glutathione S-transferase, N-terminal domain VAPA_2c09110 PF04264 YceI-like domain VAPA_2c09130 PF00199 Catalase VAPA_2c09130 PF06628 Catalase-related immune-responsive VAPA_2c09140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_2c09140 PF03466 LysR substrate binding domain VAPA_2c09160 PF01757 Acyltransferase family VAPA_2c09230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_2c09230 PF03466 LysR substrate binding domain VAPA_2c09240 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_2c09270 PF05598 Transposase domain (DUF772) VAPA_2c09270 PF01609 Transposase DDE domain VAPA_2c09320 PF02798 Glutathione S-transferase, N-terminal domain VAPA_2c09330 PF00043 Glutathione S-transferase, C-terminal domain VAPA_2c09330 PF02798 Glutathione S-transferase, N-terminal domain VAPA_2c09340 PF00724 NADH:flavin oxidoreductase / NADH oxidase family VAPA_2c09360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_2c09360 PF03466 LysR substrate binding domain VAPA_2c09370 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VAPA_2c09370 PF07992 Pyridine nucleotide-disulphide oxidoreductase VAPA_2c09380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_2c09380 PF03466 LysR substrate binding domain VAPA_2c09390 PF13533 Biotin-lipoyl like VAPA_2c09400 PF00873 AcrB/AcrD/AcrF family VAPA_2c09410 PF00873 AcrB/AcrD/AcrF family VAPA_2c09420 PF02321 Outer membrane efflux protein VAPA_2c09430 PF00724 NADH:flavin oxidoreductase / NADH oxidase family VAPA_2c09450 PF08000 Bacterial PH domain VAPA_2c09490 PF05717 IS66 Orf2 like protein VAPA_2c09500 PF03050 Transposase IS66 family VAPA_2c09500 PF13817 IS66 C-terminal element VAPA_2c09500 PF13005 zinc-finger binding domain of transposase IS66 VAPA_2c09500 PF13007 Transposase C of IS166 homeodomain VAPA_2c09540 PF17287 POTRA domain VAPA_2c09540 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB VAPA_2c09540 PF08479 POTRA domain, ShlB-type VAPA_2c09550 PF13332 Hemagglutinin repeat VAPA_2c09550 PF04829 Pre-toxin domain with VENN motif VAPA_2c09550 PF05860 haemagglutination activity domain VAPA_2c09550 PF13018 Extended Signal Peptide of Type V secretion system VAPA_2c09600 PF00392 Bacterial regulatory proteins, gntR family VAPA_2c09600 PF07702 UTRA domain VAPA_2c09610 PF00330 Aconitase family (aconitate hydratase) VAPA_2c09620 PF00694 Aconitase C-terminal domain VAPA_2c09630 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_2c09640 PF09339 IclR helix-turn-helix domain VAPA_2c09640 PF01614 Bacterial transcriptional regulator VAPA_2c09650 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_2c09660 PF00848 Ring hydroxylating alpha subunit (catalytic domain) VAPA_2c09660 PF00355 Rieske [2Fe-2S] domain VAPA_2c09670 PF13577 SnoaL-like domain VAPA_2c09680 PF04166 Pyridoxal phosphate biosynthetic protein PdxA VAPA_2c09690 PF00970 Oxidoreductase FAD-binding domain VAPA_2c09690 PF00111 2Fe-2S iron-sulfur cluster binding domain VAPA_2c09690 PF00175 Oxidoreductase NAD-binding domain VAPA_2c09710 PF00355 Rieske [2Fe-2S] domain VAPA_2c09720 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_2c09750 PF03466 LysR substrate binding domain VAPA_2c09750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_2c09760 PF00884 Sulfatase VAPA_2c09770 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_2c09790 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VAPA_2c09790 PF02770 Acyl-CoA dehydrogenase, middle domain VAPA_2c09790 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VAPA_2c09810 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_2c09840 PF02515 CoA-transferase family III VAPA_2c09870 PF08990 Erythronolide synthase docking VAPA_2c09870 PF16197 Ketoacyl-synthetase C-terminal extension VAPA_2c09870 PF00109 Beta-ketoacyl synthase, N-terminal domain VAPA_2c09870 PF09277 Erythronolide synthase, docking VAPA_2c09870 PF00550 Phosphopantetheine attachment site VAPA_2c09870 PF02801 Beta-ketoacyl synthase, C-terminal domain VAPA_2c09870 PF08659 KR domain VAPA_2c09870 PF00698 Acyl transferase domain VAPA_2c09870 PF08240 Alcohol dehydrogenase GroES-like domain VAPA_2c09870 PF14765 Polyketide synthase dehydratase VAPA_2c09880 PF03466 LysR substrate binding domain VAPA_2c09880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_2c09890 PF01266 FAD dependent oxidoreductase VAPA_2c09910 PF00171 Aldehyde dehydrogenase family VAPA_2c09940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_2c09940 PF03466 LysR substrate binding domain VAPA_2c09950 PF00561 alpha/beta hydrolase fold VAPA_2c09960 PF00106 short chain dehydrogenase VAPA_2c09980 PF00440 Bacterial regulatory proteins, tetR family VAPA_2c09980 PF08360 QacR-like protein, C-terminal region VAPA_2c10000 PF03352 Methyladenine glycosylase VAPA_2c10030 PF07690 Major Facilitator Superfamily VAPA_2c10040 PF03466 LysR substrate binding domain VAPA_2c10040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_2c10100 PF14031 Putative serine dehydratase domain VAPA_2c10100 PF01168 Alanine racemase, N-terminal domain VAPA_2c10110 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_2c10130 PF03466 LysR substrate binding domain VAPA_2c10130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_2c10150 PF00512 His Kinase A (phospho-acceptor) domain VAPA_2c10150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAPA_2c10150 PF07689 KaiB domain VAPA_2c10170 PF00072 Response regulator receiver domain VAPA_2c10170 PF00486 Transcriptional regulatory protein, C terminal VAPA_2c10180 PF00691 OmpA family VAPA_2c10180 PF01389 OmpA-like transmembrane domain VAPA_2c10190 PF13018 Extended Signal Peptide of Type V secretion system VAPA_2c10190 PF03895 YadA-like membrane anchor domain VAPA_2c10190 PF05662 Coiled stalk of trimeric autotransporter adhesin VAPA_2c10190 PF05658 Head domain of trimeric autotransporter adhesin VAPA_2c10220 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_2c10240 PF02515 CoA-transferase family III VAPA_2c10250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_2c10250 PF03466 LysR substrate binding domain VAPA_2c10260 PF01527 Transposase VAPA_2c10310 PF00196 Bacterial regulatory proteins, luxR family VAPA_2c10310 PF00072 Response regulator receiver domain VAPA_2c10330 PF03466 LysR substrate binding domain VAPA_2c10330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_2c10340 PF04909 Amidohydrolase VAPA_2c10360 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_2c10390 PF04444 Catechol dioxygenase N terminus VAPA_2c10390 PF00775 Dioxygenase VAPA_2c10420 PF00005 ABC transporter VAPA_2c10430 PF00005 ABC transporter VAPA_2c10450 PF00465 Iron-containing alcohol dehydrogenase VAPA_2c10460 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_2c10470 PF00171 Aldehyde dehydrogenase family VAPA_2c10510 PF00561 alpha/beta hydrolase fold VAPA_2c10520 PF12833 Helix-turn-helix domain VAPA_2c10530 PF00199 Catalase VAPA_2c10530 PF06628 Catalase-related immune-responsive VAPA_2c10570 PF00561 alpha/beta hydrolase fold VAPA_2c10580 PF00210 Ferritin-like domain VAPA_2c10590 PF07690 Major Facilitator Superfamily VAPA_2c10610 PF07969 Amidohydrolase family VAPA_2c10630 PF00857 Isochorismatase family VAPA_2c10640 PF02678 Pirin VAPA_2c10640 PF17954 Quercetinase C-terminal cupin domain VAPA_2c10650 PF03466 LysR substrate binding domain VAPA_2c10650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_2c10670 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_2c10690 PF01494 FAD binding domain VAPA_2c10710 PF01557 Fumarylacetoacetate (FAA) hydrolase family VAPA_2c10720 PF00136 DNA polymerase family B VAPA_2c10720 PF03104 DNA polymerase family B, exonuclease domain VAPA_2c10730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_2c10730 PF03466 LysR substrate binding domain VAPA_2c10740 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_2c10750 PF02615 Malate/L-lactate dehydrogenase VAPA_2c10770 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain VAPA_2c10770 PF00378 Enoyl-CoA hydratase/isomerase VAPA_2c10770 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain VAPA_2c10790 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_2c10800 PF02515 CoA-transferase family III VAPA_2c10820 PF04909 Amidohydrolase VAPA_2c10850 PF03466 LysR substrate binding domain VAPA_2c10850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_2c10900 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_2c10910 PF02567 Phenazine biosynthesis-like protein VAPA_2c10930 PF13091 PLD-like domain VAPA_2c10990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAPA_2c10990 PF00672 HAMP domain VAPA_2c10990 PF00512 His Kinase A (phospho-acceptor) domain VAPA_2c11060 PF00753 Metallo-beta-lactamase superfamily VAPA_2c11080 PF01565 FAD binding domain VAPA_2c11080 PF02913 FAD linked oxidases, C-terminal domain VAPA_2c11090 PF00206 Lyase VAPA_2c11090 PF10397 Adenylosuccinate lyase C-terminus VAPA_2c11100 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_2c11110 PF00581 Rhodanese-like domain VAPA_2c11120 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_2c11130 PF01568 Molydopterin dinucleotide binding domain VAPA_2c11130 PF00384 Molybdopterin oxidoreductase VAPA_2c11140 PF00072 Response regulator receiver domain VAPA_2c11140 PF00196 Bacterial regulatory proteins, luxR family VAPA_2c11150 PF00072 Response regulator receiver domain VAPA_2c11150 PF01627 Hpt domain VAPA_2c11150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAPA_2c11150 PF00512 His Kinase A (phospho-acceptor) domain VAPA_2c11150 PF00672 HAMP domain VAPA_2c11190 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_2c11210 PF01968 Hydantoinase/oxoprolinase VAPA_2c11210 PF05378 Hydantoinase/oxoprolinase N-terminal region VAPA_2c11220 PF01266 FAD dependent oxidoreductase VAPA_2c11230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_2c11230 PF03466 LysR substrate binding domain VAPA_2c11240 PF13609 Gram-negative porin VAPA_2c11250 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_2c11260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_2c11260 PF03466 LysR substrate binding domain VAPA_2c11270 PF04909 Amidohydrolase VAPA_2c11310 PF02195 ParB-like nuclease domain VAPA_2c11310 PF17762 HTH domain found in ParB protein VAPA_2c11320 PF13614 AAA domain VAPA_2c11320 PF00376 MerR family regulatory protein VAPA_2c11360 PF01425 Amidase VAPA_2c11380 PF02653 Branched-chain amino acid transport system / permease component VAPA_2c11400 PF00005 ABC transporter VAPA_2c11410 PF00005 ABC transporter VAPA_2c11420 PF01425 Amidase VAPA_2c11430 PF00732 GMC oxidoreductase VAPA_2c11430 PF05199 GMC oxidoreductase VAPA_2c11440 PF12833 Helix-turn-helix domain VAPA_2c11440 PF12852 Cupin VAPA_2c11450 PF00106 short chain dehydrogenase VAPA_2c11460 PF03707 Bacterial signalling protein N terminal repeat VAPA_2c11460 PF00990 Diguanylate cyclase, GGDEF domain VAPA_2c11460 PF00563 EAL domain VAPA_2c11470 PF03480 Bacterial extracellular solute-binding protein, family 7 VAPA_2c11480 PF00990 Diguanylate cyclase, GGDEF domain VAPA_2c11480 PF00563 EAL domain VAPA_2c11480 PF03707 Bacterial signalling protein N terminal repeat VAPA_2c11490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAPA_2c11490 PF00512 His Kinase A (phospho-acceptor) domain VAPA_2c11490 PF00989 PAS fold VAPA_2c11510 PF06299 Protein of unknown function (DUF1045) VAPA_2c11520 PF06299 Protein of unknown function (DUF1045) VAPA_2c11530 PF00392 Bacterial regulatory proteins, gntR family VAPA_2c11540 PF06754 Phosphonate metabolism protein PhnG VAPA_2c11560 PF05861 Bacterial phosphonate metabolism protein (PhnI) VAPA_2c11570 PF06007 Phosphonate metabolism protein PhnJ VAPA_2c11580 PF00005 ABC transporter VAPA_2c11590 PF00005 ABC transporter VAPA_2c11600 PF07969 Amidohydrolase family VAPA_2c11610 PF00005 ABC transporter VAPA_2c11630 PF00528 Binding-protein-dependent transport system inner membrane component VAPA_2c11720 PF03466 LysR substrate binding domain VAPA_2c11720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_2c11740 PF08402 TOBE domain VAPA_2c11740 PF00005 ABC transporter VAPA_2c11750 PF00528 Binding-protein-dependent transport system inner membrane component VAPA_2c11800 PF00005 ABC transporter VAPA_2c11830 PF03466 LysR substrate binding domain VAPA_2c11830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_2c11840 PF13378 Enolase C-terminal domain-like VAPA_2c11840 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain VAPA_2c11860 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_2c11870 PF00072 Response regulator receiver domain VAPA_2c11870 PF00486 Transcriptional regulatory protein, C terminal VAPA_2c11970 PF01609 Transposase DDE domain VAPA_2c11990 PF00884 Sulfatase VAPA_2c12000 PF03781 Sulfatase-modifying factor enzyme 1 VAPA_2c12040 PF01565 FAD binding domain VAPA_2c12040 PF02913 FAD linked oxidases, C-terminal domain VAPA_2c12050 PF00155 Aminotransferase class I and II VAPA_2c12060 PF03301 Tryptophan 2,3-dioxygenase VAPA_2c12070 PF01042 Endoribonuclease L-PSP VAPA_2c12080 PF02656 Domain of unknown function (DUF202) VAPA_2c12110 PF13609 Gram-negative porin VAPA_2c12120 PF03466 LysR substrate binding domain VAPA_2c12120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_2c12130 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_2c12170 PF01695 IstB-like ATP binding protein VAPA_2c12210 PF01425 Amidase VAPA_2c12220 PF13458 Periplasmic binding protein VAPA_2c12230 PF02653 Branched-chain amino acid transport system / permease component VAPA_2c12240 PF12399 Branched-chain amino acid ATP-binding cassette transporter VAPA_2c12240 PF00005 ABC transporter VAPA_2c12250 PF00005 ABC transporter VAPA_2c12260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_2c12260 PF03466 LysR substrate binding domain VAPA_2c12270 PF13657 HipA N-terminal domain VAPA_2c12270 PF07804 HipA-like C-terminal domain VAPA_2c12290 PF13378 Enolase C-terminal domain-like VAPA_2c12290 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain VAPA_2c12300 PF00005 ABC transporter VAPA_2c12310 PF12399 Branched-chain amino acid ATP-binding cassette transporter VAPA_2c12310 PF00005 ABC transporter VAPA_2c12320 PF11862 Domain of unknown function (DUF3382) VAPA_2c12320 PF02653 Branched-chain amino acid transport system / permease component VAPA_2c12330 PF02653 Branched-chain amino acid transport system / permease component VAPA_2c12340 PF01070 FMN-dependent dehydrogenase VAPA_2c12380 PF00795 Carbon-nitrogen hydrolase VAPA_2c12390 PF12697 Alpha/beta hydrolase family VAPA_2c12400 PF00561 alpha/beta hydrolase fold VAPA_2c12400 PF00106 short chain dehydrogenase VAPA_2c12410 PF00107 Zinc-binding dehydrogenase VAPA_2c12410 PF08240 Alcohol dehydrogenase GroES-like domain VAPA_2c12420 PF00440 Bacterial regulatory proteins, tetR family VAPA_2c12430 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region VAPA_2c12440 PF03401 Tripartite tricarboxylate transporter family receptor VAPA_2c12460 PF03458 UPF0126 domain VAPA_2c12490 PF00583 Acetyltransferase (GNAT) family VAPA_2c12510 PF03466 LysR substrate binding domain VAPA_2c12510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAPA_2c12530 PF00005 ABC transporter VAPA_2c12530 PF08402 TOBE domain VAPA_2c12540 PF00528 Binding-protein-dependent transport system inner membrane component VAPA_2c12550 PF00528 Binding-protein-dependent transport system inner membrane component VAPA_2c12560 PF01266 FAD dependent oxidoreductase VAPA_2c12570 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region VAPA_2c12570 PF01568 Molydopterin dinucleotide binding domain VAPA_2c12570 PF00384 Molybdopterin oxidoreductase VAPA_2c12580 PF07992 Pyridine nucleotide-disulphide oxidoreductase VAPA_2c12580 PF04324 BFD-like [2Fe-2S] binding domain VAPA_2c12590 PF01266 FAD dependent oxidoreductase VAPA_2c12600 PF01042 Endoribonuclease L-PSP VAPA_2c12610 PF00561 alpha/beta hydrolase fold VAPA_2c12620 PF04055 Radical SAM superfamily VAPA_2c12630 PF00990 Diguanylate cyclase, GGDEF domain VAPA_2c12660 PF01272 Transcription elongation factor, GreA/GreB, C-term VAPA_2c12660 PF03449 Transcription elongation factor, N-terminal VAPA_2c12670 PF01209 ubiE/COQ5 methyltransferase family VAPA_2c12680 PF02261 Aspartate decarboxylase VAPA_2c12700 PF13657 HipA N-terminal domain VAPA_2c12700 PF07804 HipA-like C-terminal domain VAPA_2c12730 PF01569 PAP2 superfamily VAPA_2c12750 PF01609 Transposase DDE domain VAPA_2c12760 PF01381 Helix-turn-helix VAPA_2c12810 PF01695 IstB-like ATP binding protein VAPA_2c12940 PF00005 ABC transporter VAPA_2c12960 PF00528 Binding-protein-dependent transport system inner membrane component VAPA_2c12970 PF00528 Binding-protein-dependent transport system inner membrane component VAPA_2c12980 PF00497 Bacterial extracellular solute-binding proteins, family 3 VAPA_2c13050 PF01381 Helix-turn-helix VAPA_2c13070 PF06250 YhcG PDDEXK nuclease domain VAPA_2c13070 PF17761 DUF1016 N-terminal domain VAPA_2c13220 PF02534 Type IV secretory system Conjugative DNA transfer VAPA_2c13230 PF00437 Type II/IV secretion system protein VAPA_2c13240 PF03743 Bacterial conjugation TrbI-like protein VAPA_2c13250 PF03524 Conjugal transfer protein VAPA_2c13270 PF04610 TrbL/VirB6 plasmid conjugal transfer protein VAPA_2c13280 PF07996 Type IV secretion system proteins VAPA_2c13290 PF03135 CagE, TrbE, VirB family, component of type IV transporter system