VAPA_1c00010	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c00010	SM00760	Bacterial dnaA protein helix-turn-helix domain
VAPA_1c00020	SM00480	DNA polymerase III beta subunit
VAPA_1c00030	SM00387	Histidine kinase-like ATPases
VAPA_1c00030	SM00433	TopoisomeraseII
VAPA_1c00120	SM00155	Phospholipase D. Active site motifs.
VAPA_1c00220	SM00327	von Willebrand factor (vWF) type A domain
VAPA_1c00220	SM00609	Vault protein Inter-alpha-Trypsin domain
VAPA_1c00260	SM00387	Histidine kinase-like ATPases
VAPA_1c00260	SM00388	His Kinase A (phosphoacceptor) domain
VAPA_1c00270	SM00448	cheY-homologous receiver domain
VAPA_1c00270	SM00862	Transcriptional regulatory protein, C terminal
VAPA_1c00290	SM00422	helix_turn_helix, mercury resistance
VAPA_1c00330	SM00825	Beta-ketoacyl synthase
VAPA_1c00360	SM00448	cheY-homologous receiver domain
VAPA_1c00360	SM00862	Transcriptional regulatory protein, C terminal
VAPA_1c00370	SM00387	Histidine kinase-like ATPases
VAPA_1c00370	SM00388	His Kinase A (phosphoacceptor) domain
VAPA_1c00440	SM01228	VAPA_1c00440
VAPA_1c00490	SM00470	ParB-like nuclease domain
VAPA_1c00550	SM01118	VAPA_1c00550
VAPA_1c00730	SM00345	helix_turn_helix gluconate operon transcriptional repressor
VAPA_1c00820	SM00100	Cyclic nucleotide-monophosphate binding domain
VAPA_1c00840	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c00850	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c00860	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c00940	SM00530	Helix-turn-helix XRE-family like proteins 
VAPA_1c01010	SM00342	helix_turn_helix, arabinose operon control protein
VAPA_1c01100	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c01140	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
VAPA_1c01220	SM00346	helix_turn_helix isocitrate lyase regulation
VAPA_1c01320	SM00986	Uracil DNA glycosylase superfamily
VAPA_1c01320	SM00987	UreE urease accessory protein, C-terminal domain 
VAPA_1c01370	SM00829	Enoylreductase
VAPA_1c01390	SM00822	VAPA_1c01390
VAPA_1c01410	SM00354	helix_turn _helix lactose operon repressor
VAPA_1c01450	SM01012	VAPA_1c01450
VAPA_1c01470	SM00327	von Willebrand factor (vWF) type A domain
VAPA_1c01520	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c01530	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c01630	SM00903	Flavin reductase like domain
VAPA_1c01650	SM00155	Phospholipase D. Active site motifs.
VAPA_1c01670	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c01680	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c01730	SM01230	VAPA_1c01730
VAPA_1c01750	SM00345	helix_turn_helix gluconate operon transcriptional repressor
VAPA_1c01750	SM00895	VAPA_1c01750
VAPA_1c01830	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c01840	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
VAPA_1c01860	SM00341	Helicase and RNase D C-terminal
VAPA_1c01860	SM00487	DEAD-like helicases superfamily
VAPA_1c01860	SM00490	helicase superfamily c-terminal domain
VAPA_1c01860	SM00956	VAPA_1c01860
VAPA_1c01890	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c01900	SM00345	helix_turn_helix gluconate operon transcriptional repressor
VAPA_1c01900	SM00866	VAPA_1c01900
VAPA_1c01960	SM00346	helix_turn_helix isocitrate lyase regulation
VAPA_1c01970	SM00062	Bacterial periplasmic substrate-binding proteins
VAPA_1c01970	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
VAPA_1c02070	SM01018	B12 binding domain
VAPA_1c02200	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c02210	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c02250	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
VAPA_1c02350	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c02350	SM01086	C-terminal, D2-small domain, of ClpB protein
VAPA_1c02420	SM00331	Sigma factor PP2C-like phosphatases
VAPA_1c02420	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
VAPA_1c02510	SM00219	Tyrosine kinase, catalytic domain
VAPA_1c02760	SM00938	Nitrogen regulatory protein P-II
VAPA_1c02870	SM01005	Alanine racemase, C-terminal domain
VAPA_1c02900	SM01007	Class II Aldolase and Adducin N-terminal domain
VAPA_1c03000	SM00347	helix_turn_helix multiple antibiotic resistance protein
VAPA_1c03050	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c03150	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
VAPA_1c03150	SM00387	Histidine kinase-like ATPases
VAPA_1c03150	SM00388	His Kinase A (phosphoacceptor) domain
VAPA_1c03160	SM00448	cheY-homologous receiver domain
VAPA_1c03160	SM00862	Transcriptional regulatory protein, C terminal
VAPA_1c03190	SM00825	Beta-ketoacyl synthase
VAPA_1c03270	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c03340	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c03360	SM00345	helix_turn_helix gluconate operon transcriptional repressor
VAPA_1c03360	SM00895	VAPA_1c03360
VAPA_1c03430	SM00845	GatB domain
VAPA_1c03540	SM00849	Metallo-beta-lactamase superfamily
VAPA_1c03550	SM00346	helix_turn_helix isocitrate lyase regulation
VAPA_1c03630	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c03730	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c03740	SM00346	helix_turn_helix isocitrate lyase regulation
VAPA_1c03760	SM00062	Bacterial periplasmic substrate-binding proteins
VAPA_1c03840	SM00360	RNA recognition motif
VAPA_1c03870	SM00487	DEAD-like helicases superfamily
VAPA_1c03870	SM00490	helicase superfamily c-terminal domain
VAPA_1c03880	SM00244	prohibitin homologues
VAPA_1c03920	SM00878	Biotin carboxylase C-terminal domain
VAPA_1c04020	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
VAPA_1c04070	SM00829	Enoylreductase
VAPA_1c04090	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c04110	SM00342	helix_turn_helix, arabinose operon control protein
VAPA_1c04260	SM00345	helix_turn_helix gluconate operon transcriptional repressor
VAPA_1c04260	SM00895	VAPA_1c04260
VAPA_1c04310	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c04320	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c04330	SM00822	VAPA_1c04330
VAPA_1c04340	SM00822	VAPA_1c04340
VAPA_1c04400	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c04410	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c04460	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
VAPA_1c04460	SM00458	Ricin-type beta-trefoil
VAPA_1c04470	SM01133	VAPA_1c04470
VAPA_1c04500	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c04540	SM00345	helix_turn_helix gluconate operon transcriptional repressor
VAPA_1c04540	SM00866	VAPA_1c04540
VAPA_1c04580	SM00387	Histidine kinase-like ATPases
VAPA_1c04670	SM00448	cheY-homologous receiver domain
VAPA_1c04670	SM00862	Transcriptional regulatory protein, C terminal
VAPA_1c04680	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
VAPA_1c04680	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
VAPA_1c04740	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c04750	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c04900	SM00344	helix_turn_helix ASNC type
VAPA_1c04940	SM00642	Alpha-amylase domain
VAPA_1c04950	SM00642	Alpha-amylase domain
VAPA_1c04960	SM00642	Alpha-amylase domain
VAPA_1c05080	SM00345	helix_turn_helix gluconate operon transcriptional repressor
VAPA_1c05080	SM00895	VAPA_1c05080
VAPA_1c05260	SM00554	Four repeated domains in the Fasciclin I family of proteins, present in many other contexts.
VAPA_1c05320	SM00346	helix_turn_helix isocitrate lyase regulation
VAPA_1c05410	SM00836	DALR anticodon binding domain
VAPA_1c05410	SM01016	Arginyl tRNA synthetase N terminal dom
VAPA_1c05450	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c05470	SM00155	Phospholipase D. Active site motifs.
VAPA_1c05490	SM00867	YceI-like domain 
VAPA_1c05500	SM00867	YceI-like domain 
VAPA_1c05520	SM00387	Histidine kinase-like ATPases
VAPA_1c05520	SM00388	His Kinase A (phosphoacceptor) domain
VAPA_1c05520	SM00448	cheY-homologous receiver domain
VAPA_1c05530	SM00981	VAPA_1c05530
VAPA_1c05700	SM00342	helix_turn_helix, arabinose operon control protein
VAPA_1c05780	SM00559	Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen
VAPA_1c05800	SM00460	Transglutaminase/protease-like homologues
VAPA_1c05820	SM01060	VAPA_1c05820
VAPA_1c05850	SM00912	haemagglutination activity domain
VAPA_1c05870	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
VAPA_1c05870	SM00387	Histidine kinase-like ATPases
VAPA_1c05870	SM00388	His Kinase A (phosphoacceptor) domain
VAPA_1c05870	SM00448	cheY-homologous receiver domain
VAPA_1c05890	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
VAPA_1c05890	SM00387	Histidine kinase-like ATPases
VAPA_1c05890	SM00388	His Kinase A (phosphoacceptor) domain
VAPA_1c05890	SM00448	cheY-homologous receiver domain
VAPA_1c05960	SM00219	Tyrosine kinase, catalytic domain
VAPA_1c05970	SM00925	MltA specific insert domain
VAPA_1c06060	SM00028	Tetratricopeptide repeats
VAPA_1c06070	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c06070	SM01086	C-terminal, D2-small domain, of ClpB protein
VAPA_1c06200	SM00240	Forkhead associated domain
VAPA_1c06210	SM00331	Sigma factor PP2C-like phosphatases
VAPA_1c06210	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
VAPA_1c06310	SM00421	helix_turn_helix, Lux Regulon
VAPA_1c06310	SM00448	cheY-homologous receiver domain
VAPA_1c06360	SM00729	Elongator protein 3, MiaB family, Radical SAM
VAPA_1c06400	SM00345	helix_turn_helix gluconate operon transcriptional repressor
VAPA_1c06580	SM00346	helix_turn_helix isocitrate lyase regulation
VAPA_1c06630	SM00822	VAPA_1c06630
VAPA_1c06770	SM00448	cheY-homologous receiver domain
VAPA_1c06770	SM00862	Transcriptional regulatory protein, C terminal
VAPA_1c06780	SM00387	Histidine kinase-like ATPases
VAPA_1c06780	SM00388	His Kinase A (phosphoacceptor) domain
VAPA_1c06790	SM00448	cheY-homologous receiver domain
VAPA_1c06790	SM00862	Transcriptional regulatory protein, C terminal
VAPA_1c06870	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c06880	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c07060	SM00903	Flavin reductase like domain
VAPA_1c07080	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c07190	SM00530	Helix-turn-helix XRE-family like proteins 
VAPA_1c07200	SM00487	DEAD-like helicases superfamily
VAPA_1c07200	SM00490	helicase superfamily c-terminal domain
VAPA_1c07300	SM00986	Uracil DNA glycosylase superfamily
VAPA_1c07300	SM00987	UreE urease accessory protein, C-terminal domain 
VAPA_1c07370	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
VAPA_1c07370	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
VAPA_1c07380	SM00649	Ribosomal protein L11/L12
VAPA_1c07430	SM00663	RNA polymerase I subunit A N-terminus
VAPA_1c07470	SM00091	PAS domain
VAPA_1c07470	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
VAPA_1c07470	SM00387	Histidine kinase-like ATPases
VAPA_1c07470	SM00388	His Kinase A (phosphoacceptor) domain
VAPA_1c07480	SM00448	cheY-homologous receiver domain
VAPA_1c07520	SM00530	Helix-turn-helix XRE-family like proteins 
VAPA_1c07530	SM00530	Helix-turn-helix XRE-family like proteins 
VAPA_1c07540	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
VAPA_1c07590	SM00560	LamG-like jellyroll fold domain
VAPA_1c07670	SM00411	bacterial (prokaryotic) histone like domain
VAPA_1c07720	SM00091	PAS domain
VAPA_1c07720	SM00267	diguanylate cyclase
VAPA_1c07730	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
VAPA_1c07730	SM00091	PAS domain
VAPA_1c07730	SM00387	Histidine kinase-like ATPases
VAPA_1c07730	SM00388	His Kinase A (phosphoacceptor) domain
VAPA_1c07730	SM00448	cheY-homologous receiver domain
VAPA_1c07810	SM00487	DEAD-like helicases superfamily
VAPA_1c07810	SM00490	helicase superfamily c-terminal domain
VAPA_1c07860	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
VAPA_1c07890	SM00829	Enoylreductase
VAPA_1c07990	SM00925	MltA specific insert domain
VAPA_1c08100	SM00345	helix_turn_helix gluconate operon transcriptional repressor
VAPA_1c08120	SM00897	FIST N domain
VAPA_1c08120	SM01204	VAPA_1c08120
VAPA_1c08260	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c08440	SM00858	VAPA_1c08440
VAPA_1c08480	SM00345	helix_turn_helix gluconate operon transcriptional repressor
VAPA_1c08480	SM00895	VAPA_1c08480
VAPA_1c08520	SM00345	helix_turn_helix gluconate operon transcriptional repressor
VAPA_1c08520	SM00866	VAPA_1c08520
VAPA_1c08560	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c08570	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c08690	SM00822	VAPA_1c08690
VAPA_1c08830	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c08880	SM00062	Bacterial periplasmic substrate-binding proteins
VAPA_1c08910	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c09120	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c09130	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c09240	SM00945	ProQ/FINO family
VAPA_1c09250	SM00903	Flavin reductase like domain
VAPA_1c09280	SM00347	helix_turn_helix multiple antibiotic resistance protein
VAPA_1c09350	SM00363	S4 RNA-binding domain
VAPA_1c09360	SM00849	Metallo-beta-lactamase superfamily
VAPA_1c09570	SM00833	Cobalamin synthesis protein cobW C-terminal domain
VAPA_1c09620	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c09620	SM01086	C-terminal, D2-small domain, of ClpB protein
VAPA_1c09760	SM00842	Cell division protein FtsA
VAPA_1c09770	SM00864	Tubulin/FtsZ family, GTPase domain
VAPA_1c09770	SM00865	Tubulin/FtsZ family, C-terminal domain
VAPA_1c09840	SM00563	Phosphate acyltransferases
VAPA_1c09890	SM00955	VAPA_1c09890
VAPA_1c09910	SM00421	helix_turn_helix, Lux Regulon
VAPA_1c09910	SM00448	cheY-homologous receiver domain
VAPA_1c10020	SM00878	Biotin carboxylase C-terminal domain
VAPA_1c10090	SM00644	VAPA_1c10090
VAPA_1c10100	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c10100	SM00448	cheY-homologous receiver domain
VAPA_1c10110	SM00387	Histidine kinase-like ATPases
VAPA_1c10110	SM00388	His Kinase A (phosphoacceptor) domain
VAPA_1c10140	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c10140	SM00962	SRP54-type protein, GTPase domain
VAPA_1c10140	SM00963	SRP54-type protein, helical bundle domain
VAPA_1c10190	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c10190	SM00448	cheY-homologous receiver domain
VAPA_1c10210	SM00387	Histidine kinase-like ATPases
VAPA_1c10210	SM00388	His Kinase A (phosphoacceptor) domain
VAPA_1c10220	SM00729	Elongator protein 3, MiaB family, Radical SAM
VAPA_1c10260	SM00855	Phosphoglycerate mutase family
VAPA_1c10290	SM00905	Dihydroneopterin aldolase
VAPA_1c10370	SM00345	helix_turn_helix gluconate operon transcriptional repressor
VAPA_1c10530	SM01034	Sensors of blue-light using FAD
VAPA_1c10540	SM00419	helix_turn_helix, cAMP Regulatory protein
VAPA_1c10590	SM00344	helix_turn_helix ASNC type
VAPA_1c10620	SM00421	helix_turn_helix, Lux Regulon
VAPA_1c10770	SM00861	Transketolase, pyrimidine binding domain
VAPA_1c10810	SM01329	VAPA_1c10810
VAPA_1c10870	SM00530	Helix-turn-helix XRE-family like proteins 
VAPA_1c10990	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c11010	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c11050	SM01130	VAPA_1c11050
VAPA_1c11070	SM00822	VAPA_1c11070
VAPA_1c11110	SM01209	VAPA_1c11110
VAPA_1c11130	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c11170	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c11260	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c11470	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c11480	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c11550	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c11670	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c11690	SM00822	VAPA_1c11690
VAPA_1c11720	SM00342	helix_turn_helix, arabinose operon control protein
VAPA_1c11750	SM00883	Chaperonin 10 Kd subunit
VAPA_1c11760	SM00155	Phospholipase D. Active site motifs.
VAPA_1c11820	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c11840	SM00062	Bacterial periplasmic substrate-binding proteins
VAPA_1c11840	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
VAPA_1c11850	SM00530	Helix-turn-helix XRE-family like proteins 
VAPA_1c11970	SM01219	VAPA_1c11970
VAPA_1c11990	SM00842	Cell division protein FtsA
VAPA_1c12030	SM00965	Secretin and TonB N terminus short domain
VAPA_1c12060	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
VAPA_1c12100	SM01321	VAPA_1c12100
VAPA_1c12130	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c12190	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c12310	SM00062	Bacterial periplasmic substrate-binding proteins
VAPA_1c12420	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
VAPA_1c12490	SM00226	Low molecular weight phosphatase family
VAPA_1c12710	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c12770	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c12780	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c12790	SM01119	VAPA_1c12790
VAPA_1c12850	SM00903	Flavin reductase like domain
VAPA_1c12890	SM00014	Acid phosphatase homologues
VAPA_1c12930	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c12940	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c13070	SM00327	von Willebrand factor (vWF) type A domain
VAPA_1c13130	SM00986	Uracil DNA glycosylase superfamily
VAPA_1c13130	SM00987	UreE urease accessory protein, C-terminal domain 
VAPA_1c13150	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c13240	SM00829	Enoylreductase
VAPA_1c13250	SM00448	cheY-homologous receiver domain
VAPA_1c13280	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c13330	SM00354	helix_turn _helix lactose operon repressor
VAPA_1c13360	SM00904	Riboflavin kinase
VAPA_1c13370	SM00507	HNH nucleases
VAPA_1c13510	SM00100	Cyclic nucleotide-monophosphate binding domain
VAPA_1c13510	SM00419	helix_turn_helix, cAMP Regulatory protein
VAPA_1c13520	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c13520	SM00843	VAPA_1c13520
VAPA_1c13540	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c13570	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c13580	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c13750	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
VAPA_1c13780	SM00822	VAPA_1c13780
VAPA_1c13810	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
VAPA_1c14100	SM00091	PAS domain
VAPA_1c14100	SM00387	Histidine kinase-like ATPases
VAPA_1c14110	SM00421	helix_turn_helix, Lux Regulon
VAPA_1c14110	SM00448	cheY-homologous receiver domain
VAPA_1c14140	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c14150	SM01116	VAPA_1c14150
VAPA_1c14160	SM00822	VAPA_1c14160
VAPA_1c14170	SM00345	helix_turn_helix gluconate operon transcriptional repressor
VAPA_1c14240	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c14280	SM00345	helix_turn_helix gluconate operon transcriptional repressor
VAPA_1c14280	SM00895	VAPA_1c14280
VAPA_1c14350	SM00450	Rhodanese Homology Domain
VAPA_1c14420	SM00506	Appr-1"-p processing enzyme
VAPA_1c14440	SM01359	VAPA_1c14440
VAPA_1c14440	SM01360	VAPA_1c14440
VAPA_1c14550	SM00448	cheY-homologous receiver domain
VAPA_1c14550	SM00850	LytTr DNA-binding domain
VAPA_1c14640	SM01068	Putative carbohydrate binding domain
VAPA_1c14710	SM00316	Ribosomal protein S1-like RNA-binding domain
VAPA_1c14720	SM00363	S4 RNA-binding domain
VAPA_1c14830	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
VAPA_1c14840	SM00822	VAPA_1c14840
VAPA_1c14850	SM00823	Phosphopantetheine attachment site
VAPA_1c14860	SM00825	Beta-ketoacyl synthase
VAPA_1c14910	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
VAPA_1c14920	SM00838	Elongation factor G C-terminus
VAPA_1c14950	SM00358	Double-stranded RNA binding motif
VAPA_1c14950	SM00535	Ribonuclease III family
VAPA_1c15040	SM00464	Found in ATP-dependent protease La (LON)
VAPA_1c15120	SM00859	Semialdehyde dehydrogenase, NAD binding domain
VAPA_1c15130	SM01329	VAPA_1c15130
VAPA_1c15240	SM00345	helix_turn_helix gluconate operon transcriptional repressor
VAPA_1c15240	SM00866	VAPA_1c15240
VAPA_1c15310	SM00530	Helix-turn-helix XRE-family like proteins 
VAPA_1c15350	SM00899	VAPA_1c15350
VAPA_1c15540	SM00342	helix_turn_helix, arabinose operon control protein
VAPA_1c15750	SM00479	VAPA_1c15750
VAPA_1c15760	SM00487	DEAD-like helicases superfamily
VAPA_1c15760	SM00490	helicase superfamily c-terminal domain
VAPA_1c15800	SM00829	Enoylreductase
VAPA_1c15810	SM00347	helix_turn_helix multiple antibiotic resistance protein
VAPA_1c15980	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c15990	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c16010	SM00822	VAPA_1c16010
VAPA_1c16020	SM00822	VAPA_1c16020
VAPA_1c16030	SM00347	helix_turn_helix multiple antibiotic resistance protein
VAPA_1c16140	SM00858	VAPA_1c16140
VAPA_1c16260	SM00421	helix_turn_helix, Lux Regulon
VAPA_1c16260	SM00448	cheY-homologous receiver domain
VAPA_1c16300	SM01240	VAPA_1c16300
VAPA_1c16370	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
VAPA_1c16370	SM00474	3'-5' exonuclease
VAPA_1c16370	SM00475	5'-3' exonuclease
VAPA_1c16370	SM00482	DNA polymerase A domain
VAPA_1c16410	SM00062	Bacterial periplasmic substrate-binding proteins
VAPA_1c16470	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c16480	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c16540	SM00530	Helix-turn-helix XRE-family like proteins 
VAPA_1c16590	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c16610	SM00450	Rhodanese Homology Domain
VAPA_1c16660	SM00861	Transketolase, pyrimidine binding domain
VAPA_1c16750	SM00345	helix_turn_helix gluconate operon transcriptional repressor
VAPA_1c16750	SM00895	VAPA_1c16750
VAPA_1c16790	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c16800	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c16840	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c16890	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
VAPA_1c16900	SM01092	CO dehydrogenase flavoprotein C-terminal domain
VAPA_1c16910	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c17080	SM00411	bacterial (prokaryotic) histone like domain
VAPA_1c17090	SM00316	Ribosomal protein S1-like RNA-binding domain
VAPA_1c17120	SM00830	Chorismate mutase type II
VAPA_1c17150	SM00434	DNA Topoisomerase IV
VAPA_1c17370	SM00852	Probable molybdopterin binding domain
VAPA_1c17380	SM01230	VAPA_1c17380
VAPA_1c17400	SM00387	Histidine kinase-like ATPases
VAPA_1c17400	SM00388	His Kinase A (phosphoacceptor) domain
VAPA_1c17410	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c17410	SM00448	cheY-homologous receiver domain
VAPA_1c17470	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c17480	SM00387	Histidine kinase-like ATPases
VAPA_1c17480	SM00388	His Kinase A (phosphoacceptor) domain
VAPA_1c17480	SM00448	cheY-homologous receiver domain
VAPA_1c17690	SM00116	Domain in cystathionine beta-synthase and other proteins.
VAPA_1c17810	SM00729	Elongator protein 3, MiaB family, Radical SAM
VAPA_1c17830	SM01350	VAPA_1c17830
VAPA_1c17840	SM00474	3'-5' exonuclease
VAPA_1c17910	SM00829	Enoylreductase
VAPA_1c17980	SM00763	PrkA AAA domain
VAPA_1c18000	SM00271	DnaJ molecular chaperone homology domain
VAPA_1c18080	SM00822	VAPA_1c18080
VAPA_1c18090	SM00858	VAPA_1c18090
VAPA_1c18150	SM00345	helix_turn_helix gluconate operon transcriptional repressor
VAPA_1c18150	SM00895	VAPA_1c18150
VAPA_1c18170	SM01130	VAPA_1c18170
VAPA_1c18200	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
VAPA_1c18270	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c18300	SM00155	Phospholipase D. Active site motifs.
VAPA_1c18330	SM00345	helix_turn_helix gluconate operon transcriptional repressor
VAPA_1c18330	SM00895	VAPA_1c18330
VAPA_1c18370	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c18380	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c18410	SM00849	Metallo-beta-lactamase superfamily
VAPA_1c18470	SM00116	Domain in cystathionine beta-synthase and other proteins.
VAPA_1c18500	SM00400	zinc finger
VAPA_1c18500	SM00493	VAPA_1c18500
VAPA_1c18660	SM00841	Elongation factor P, C-terminal
VAPA_1c18660	SM01185	VAPA_1c18660
VAPA_1c18680	SM00278	Helix-hairpin-helix DNA-binding motif class 1
VAPA_1c18680	SM00465	GIY-YIG type nucleases (URI domain)
VAPA_1c18730	SM01329	VAPA_1c18730
VAPA_1c18740	SM00411	bacterial (prokaryotic) histone like domain
VAPA_1c18770	SM00855	Phosphoglycerate mutase family
VAPA_1c18820	SM00528	Domain in histone-like proteins of HNS family
VAPA_1c18830	SM00829	Enoylreductase
VAPA_1c18860	SM00257	Lysin motif
VAPA_1c19070	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c19090	SM00871	Bacterial transcription activator, effector binding domain
VAPA_1c19120	SM00670	Large family of predicted nucleotide-binding domains
VAPA_1c19190	SM00852	Probable molybdopterin binding domain
VAPA_1c19210	SM01130	VAPA_1c19210
VAPA_1c19240	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c19240	SM01086	C-terminal, D2-small domain, of ClpB protein
VAPA_1c19270	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c19310	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c19400	SM00825	Beta-ketoacyl synthase
VAPA_1c19430	SM00342	helix_turn_helix, arabinose operon control protein
VAPA_1c19530	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c19600	SM00342	helix_turn_helix, arabinose operon control protein
VAPA_1c19610	SM00151	SWI complex, BAF60b domains
VAPA_1c19650	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
VAPA_1c19700	SM00873	B3/4 domain
VAPA_1c19700	SM00874	tRNA synthetase B5 domain
VAPA_1c19700	SM00896	Ferredoxin-fold anticodon binding domain
VAPA_1c19710	SM00411	bacterial (prokaryotic) histone like domain
VAPA_1c19720	SM00422	helix_turn_helix, mercury resistance
VAPA_1c19810	SM00318	Staphylococcal nuclease homologues
VAPA_1c19870	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
VAPA_1c19900	SM00226	Low molecular weight phosphatase family
VAPA_1c19910	SM00226	Low molecular weight phosphatase family
VAPA_1c19970	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
VAPA_1c19970	SM00387	Histidine kinase-like ATPases
VAPA_1c19970	SM00388	His Kinase A (phosphoacceptor) domain
VAPA_1c19980	SM00448	cheY-homologous receiver domain
VAPA_1c19980	SM00862	Transcriptional regulatory protein, C terminal
VAPA_1c20010	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c20150	SM00345	helix_turn_helix gluconate operon transcriptional repressor
VAPA_1c20150	SM00895	VAPA_1c20150
VAPA_1c20170	SM00530	Helix-turn-helix XRE-family like proteins 
VAPA_1c20220	SM00829	Enoylreductase
VAPA_1c20270	SM00421	helix_turn_helix, Lux Regulon
VAPA_1c20280	SM00342	helix_turn_helix, arabinose operon control protein
VAPA_1c20300	SM00829	Enoylreductase
VAPA_1c20340	SM00342	helix_turn_helix, arabinose operon control protein
VAPA_1c20430	SM00346	helix_turn_helix isocitrate lyase regulation
VAPA_1c20460	SM00881	CoA binding domain
VAPA_1c20520	SM00091	PAS domain
VAPA_1c20520	SM00387	Histidine kinase-like ATPases
VAPA_1c20560	SM00972	Spore Coat Protein U domain
VAPA_1c20590	SM00972	Spore Coat Protein U domain
VAPA_1c20720	SM00226	Low molecular weight phosphatase family
VAPA_1c20820	SM00354	helix_turn _helix lactose operon repressor
VAPA_1c20850	SM00858	VAPA_1c20850
VAPA_1c20880	SM00100	Cyclic nucleotide-monophosphate binding domain
VAPA_1c20920	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
VAPA_1c20940	SM00226	Low molecular weight phosphatase family
VAPA_1c20950	SM00226	Low molecular weight phosphatase family
VAPA_1c20990	SM00052	Putative diguanylate phosphodiesterase
VAPA_1c21010	SM00091	PAS domain
VAPA_1c21010	SM00267	diguanylate cyclase
VAPA_1c21090	SM00642	Alpha-amylase domain
VAPA_1c21100	SM00642	Alpha-amylase domain
VAPA_1c21110	SM00642	Alpha-amylase domain
VAPA_1c21130	SM00642	Alpha-amylase domain
VAPA_1c21140	SM00642	Alpha-amylase domain
VAPA_1c21150	SM00642	Alpha-amylase domain
VAPA_1c21170	SM00530	Helix-turn-helix XRE-family like proteins 
VAPA_1c21180	SM00530	Helix-turn-helix XRE-family like proteins 
VAPA_1c21210	SM00422	helix_turn_helix, mercury resistance
VAPA_1c21280	SM00116	Domain in cystathionine beta-synthase and other proteins.
VAPA_1c21350	SM00155	Phospholipase D. Active site motifs.
VAPA_1c21530	SM00822	VAPA_1c21530
VAPA_1c21590	SM00090	RIO-like kinase
VAPA_1c21690	SM00421	helix_turn_helix, Lux Regulon
VAPA_1c21710	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c21720	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c21750	SM00344	helix_turn_helix ASNC type
VAPA_1c21770	SM00091	PAS domain
VAPA_1c21770	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c21810	SM00347	helix_turn_helix multiple antibiotic resistance protein
VAPA_1c21860	SM00062	Bacterial periplasmic substrate-binding proteins
VAPA_1c21880	SM00882	Coenzyme A transferase
VAPA_1c21910	SM00354	helix_turn _helix lactose operon repressor
VAPA_1c21920	SM01130	VAPA_1c21920
VAPA_1c21930	SM01130	VAPA_1c21930
VAPA_1c21940	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c21980	SM00822	VAPA_1c21980
VAPA_1c22000	SM00829	Enoylreductase
VAPA_1c22010	SM00354	helix_turn _helix lactose operon repressor
VAPA_1c22030	SM00342	helix_turn_helix, arabinose operon control protein
VAPA_1c22070	SM00062	Bacterial periplasmic substrate-binding proteins
VAPA_1c22080	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c22110	SM00342	helix_turn_helix, arabinose operon control protein
VAPA_1c22160	SM00100	Cyclic nucleotide-monophosphate binding domain
VAPA_1c22160	SM00419	helix_turn_helix, cAMP Regulatory protein
VAPA_1c22240	SM00342	helix_turn_helix, arabinose operon control protein
VAPA_1c22260	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
VAPA_1c22260	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c22270	SM00849	Metallo-beta-lactamase superfamily
VAPA_1c22280	SM01116	VAPA_1c22280
VAPA_1c22290	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c22350	SM00342	helix_turn_helix, arabinose operon control protein
VAPA_1c22450	SM00062	Bacterial periplasmic substrate-binding proteins
VAPA_1c22480	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c22530	SM01007	Class II Aldolase and Adducin N-terminal domain
VAPA_1c22590	SM00346	helix_turn_helix isocitrate lyase regulation
VAPA_1c22800	SM01007	Class II Aldolase and Adducin N-terminal domain
VAPA_1c22850	SM00859	Semialdehyde dehydrogenase, NAD binding domain
VAPA_1c22880	SM00830	Chorismate mutase type II
VAPA_1c22930	SM00346	helix_turn_helix isocitrate lyase regulation
VAPA_1c22940	SM00345	helix_turn_helix gluconate operon transcriptional repressor
VAPA_1c22940	SM00895	VAPA_1c22940
VAPA_1c22990	SM00878	Biotin carboxylase C-terminal domain
VAPA_1c23000	SM00729	Elongator protein 3, MiaB family, Radical SAM
VAPA_1c23000	SM00876	Biotin and Thiamin Synthesis associated domain
VAPA_1c23040	SM00344	helix_turn_helix ASNC type
VAPA_1c23100	SM00487	DEAD-like helicases superfamily
VAPA_1c23100	SM00490	helicase superfamily c-terminal domain
VAPA_1c23180	SM00479	VAPA_1c23180
VAPA_1c23270	SM00235	Zinc-dependent metalloprotease
VAPA_1c23380	SM00421	helix_turn_helix, Lux Regulon
VAPA_1c23380	SM00448	cheY-homologous receiver domain
VAPA_1c23390	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
VAPA_1c23390	SM00091	PAS domain
VAPA_1c23390	SM00387	Histidine kinase-like ATPases
VAPA_1c23390	SM00388	His Kinase A (phosphoacceptor) domain
VAPA_1c23510	SM00861	Transketolase, pyrimidine binding domain
VAPA_1c23560	SM00331	Sigma factor PP2C-like phosphatases
VAPA_1c23560	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
VAPA_1c23580	SM00491	VAPA_1c23580
VAPA_1c23620	SM00363	S4 RNA-binding domain
VAPA_1c23630	SM00562	VAPA_1c23630
VAPA_1c23650	SM00028	Tetratricopeptide repeats
VAPA_1c23700	SM00564	beta-propeller repeat
VAPA_1c23740	SM00244	prohibitin homologues
VAPA_1c23750	SM00244	prohibitin homologues
VAPA_1c23780	SM00788	Adenylosuccinate synthetase
VAPA_1c23820	SM00342	helix_turn_helix, arabinose operon control protein
VAPA_1c23860	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c23880	SM00967	RNA 2'-O ribose methyltransferase substrate binding
VAPA_1c23900	SM00530	Helix-turn-helix XRE-family like proteins 
VAPA_1c23970	SM00754	A domain in the BMP inhibitor chordin and in microbial proteins.
VAPA_1c24030	SM00347	helix_turn_helix multiple antibiotic resistance protein
VAPA_1c24040	SM00729	Elongator protein 3, MiaB family, Radical SAM
VAPA_1c24050	SM00357	Cold shock protein domain
VAPA_1c24150	SM01119	VAPA_1c24150
VAPA_1c24190	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c24220	SM01007	Class II Aldolase and Adducin N-terminal domain
VAPA_1c24240	SM00345	helix_turn_helix gluconate operon transcriptional repressor
VAPA_1c24240	SM00895	VAPA_1c24240
VAPA_1c24440	SM00100	Cyclic nucleotide-monophosphate binding domain
VAPA_1c24470	SM00855	Phosphoglycerate mutase family
VAPA_1c24540	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c24560	SM00448	cheY-homologous receiver domain
VAPA_1c24560	SM00862	Transcriptional regulatory protein, C terminal
VAPA_1c24570	SM00091	PAS domain
VAPA_1c24570	SM00387	Histidine kinase-like ATPases
VAPA_1c24570	SM00388	His Kinase A (phosphoacceptor) domain
VAPA_1c24620	SM00357	Cold shock protein domain
VAPA_1c24620	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c24620	SM00959	Rho termination factor, N-terminal domain
VAPA_1c24690	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c24710	SM00493	VAPA_1c24710
VAPA_1c24740	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c24770	SM00849	Metallo-beta-lactamase superfamily
VAPA_1c24800	SM00852	Probable molybdopterin binding domain
VAPA_1c24820	SM00729	Elongator protein 3, MiaB family, Radical SAM
VAPA_1c24850	SM00155	Phospholipase D. Active site motifs.
VAPA_1c25000	SM00938	Nitrogen regulatory protein P-II
VAPA_1c25120	SM00917	LeuA allosteric (dimerisation) domain
VAPA_1c25130	SM00917	LeuA allosteric (dimerisation) domain
VAPA_1c25150	SM00346	helix_turn_helix isocitrate lyase regulation
VAPA_1c25180	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
VAPA_1c25190	SM00342	helix_turn_helix, arabinose operon control protein
VAPA_1c25230	SM00346	helix_turn_helix isocitrate lyase regulation
VAPA_1c25240	SM00448	cheY-homologous receiver domain
VAPA_1c25240	SM00862	Transcriptional regulatory protein, C terminal
VAPA_1c25250	SM00387	Histidine kinase-like ATPases
VAPA_1c25250	SM00388	His Kinase A (phosphoacceptor) domain
VAPA_1c25260	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
VAPA_1c25560	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c25690	SM00460	Transglutaminase/protease-like homologues
VAPA_1c25750	SM00062	Bacterial periplasmic substrate-binding proteins
VAPA_1c25790	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c25940	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c26000	SM00968	SMC proteins Flexible Hinge Domain
VAPA_1c26010	SM00771	ZipA, C-terminal domain (FtsZ-binding)
VAPA_1c26020	SM00278	Helix-hairpin-helix DNA-binding motif class 1
VAPA_1c26020	SM00292	breast cancer carboxy-terminal domain
VAPA_1c26020	SM00532	Ligase N family
VAPA_1c26060	SM00062	Bacterial periplasmic substrate-binding proteins
VAPA_1c26110	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
VAPA_1c26130	SM01211	VAPA_1c26130
VAPA_1c26190	SM00342	helix_turn_helix, arabinose operon control protein
VAPA_1c26260	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c26280	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c26340	SM00886	Stress responsive A/B Barrel Domain
VAPA_1c26370	SM00829	Enoylreductase
VAPA_1c26490	SM00345	helix_turn_helix gluconate operon transcriptional repressor
VAPA_1c26490	SM00895	VAPA_1c26490
VAPA_1c26660	SM00448	cheY-homologous receiver domain
VAPA_1c26660	SM00862	Transcriptional regulatory protein, C terminal
VAPA_1c26670	SM00387	Histidine kinase-like ATPases
VAPA_1c26670	SM00388	His Kinase A (phosphoacceptor) domain
VAPA_1c26700	SM00347	helix_turn_helix multiple antibiotic resistance protein
VAPA_1c26740	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
VAPA_1c26750	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c26780	SM00829	Enoylreductase
VAPA_1c26790	SM00062	Bacterial periplasmic substrate-binding proteins
VAPA_1c26810	SM00345	helix_turn_helix gluconate operon transcriptional repressor
VAPA_1c26810	SM00895	VAPA_1c26810
VAPA_1c26820	SM00316	Ribosomal protein S1-like RNA-binding domain
VAPA_1c26820	SM00732	Likely ribonuclease with RNase H fold.
VAPA_1c27010	SM00248	ankyrin repeats
VAPA_1c27100	SM00331	Sigma factor PP2C-like phosphatases
VAPA_1c27100	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
VAPA_1c27110	SM00869	Autotransporter beta-domain
VAPA_1c27250	SM00749	bacterial OsmY and nodulation domain
VAPA_1c27280	SM00729	Elongator protein 3, MiaB family, Radical SAM
VAPA_1c27390	SM00342	helix_turn_helix, arabinose operon control protein
VAPA_1c27450	SM00986	Uracil DNA glycosylase superfamily
VAPA_1c27450	SM00987	UreE urease accessory protein, C-terminal domain 
VAPA_1c27470	SM00488	VAPA_1c27470
VAPA_1c27470	SM00491	VAPA_1c27470
VAPA_1c27480	SM00387	Histidine kinase-like ATPases
VAPA_1c27480	SM00388	His Kinase A (phosphoacceptor) domain
VAPA_1c27480	SM00448	cheY-homologous receiver domain
VAPA_1c27490	SM00138	Methyltransferase, chemotaxis proteins 
VAPA_1c27510	SM00387	Histidine kinase-like ATPases
VAPA_1c27510	SM00388	His Kinase A (phosphoacceptor) domain
VAPA_1c27510	SM00448	cheY-homologous receiver domain
VAPA_1c27520	SM00448	cheY-homologous receiver domain
VAPA_1c27540	SM00240	Forkhead associated domain
VAPA_1c27600	SM00248	ankyrin repeats
VAPA_1c27620	SM00421	helix_turn_helix, Lux Regulon
VAPA_1c27620	SM00448	cheY-homologous receiver domain
VAPA_1c27630	SM00387	Histidine kinase-like ATPases
VAPA_1c27630	SM00388	His Kinase A (phosphoacceptor) domain
VAPA_1c27700	SM00833	Cobalamin synthesis protein cobW C-terminal domain
VAPA_1c27730	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c27840	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
VAPA_1c27850	SM00342	helix_turn_helix, arabinose operon control protein
VAPA_1c27970	SM00116	Domain in cystathionine beta-synthase and other proteins.
VAPA_1c27970	SM01240	VAPA_1c27970
VAPA_1c28110	SM00316	Ribosomal protein S1-like RNA-binding domain
VAPA_1c28110	SM00322	K homology RNA-binding domain
VAPA_1c28140	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c28220	SM00244	prohibitin homologues
VAPA_1c28250	SM00448	cheY-homologous receiver domain
VAPA_1c28360	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c28360	SM00487	DEAD-like helicases superfamily
VAPA_1c28360	SM00490	helicase superfamily c-terminal domain
VAPA_1c28360	SM00847	Helicase associated domain (HA2)  Add an annotation
VAPA_1c28370	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c28400	SM00829	Enoylreductase
VAPA_1c28470	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c28490	SM00530	Helix-turn-helix XRE-family like proteins 
VAPA_1c28550	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c28560	SM00316	Ribosomal protein S1-like RNA-binding domain
VAPA_1c28620	SM01209	VAPA_1c28620
VAPA_1c28620	SM01210	VAPA_1c28620
VAPA_1c28660	SM00563	Phosphate acyltransferases
VAPA_1c28680	SM00822	VAPA_1c28680
VAPA_1c28880	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c28930	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
VAPA_1c28930	SM00387	Histidine kinase-like ATPases
VAPA_1c28930	SM00388	His Kinase A (phosphoacceptor) domain
VAPA_1c28940	SM00448	cheY-homologous receiver domain
VAPA_1c28940	SM00862	Transcriptional regulatory protein, C terminal
VAPA_1c29000	SM00155	Phospholipase D. Active site motifs.
VAPA_1c29010	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c29010	SM01086	C-terminal, D2-small domain, of ClpB protein
VAPA_1c29030	SM01329	VAPA_1c29030
VAPA_1c29150	SM00870	VAPA_1c29150
VAPA_1c29220	SM00100	Cyclic nucleotide-monophosphate binding domain
VAPA_1c29220	SM00419	helix_turn_helix, cAMP Regulatory protein
VAPA_1c29280	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c29300	SM01103	VAPA_1c29300
VAPA_1c29350	SM00851	MGS-like domain
VAPA_1c29350	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
VAPA_1c29370	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
VAPA_1c29440	SM00935	Outer membrane protein (OmpH-like)
VAPA_1c29570	SM00822	VAPA_1c29570
VAPA_1c29580	SM00316	Ribosomal protein S1-like RNA-binding domain
VAPA_1c29580	SM00955	VAPA_1c29580
VAPA_1c29630	SM00729	Elongator protein 3, MiaB family, Radical SAM
VAPA_1c29670	SM00954	Region found in RelA / SpoT proteins
VAPA_1c29690	SM00822	VAPA_1c29690
VAPA_1c29720	SM00448	cheY-homologous receiver domain
VAPA_1c29720	SM00862	Transcriptional regulatory protein, C terminal
VAPA_1c29730	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
VAPA_1c29730	SM00387	Histidine kinase-like ATPases
VAPA_1c29730	SM00388	His Kinase A (phosphoacceptor) domain
VAPA_1c29760	SM00487	DEAD-like helicases superfamily
VAPA_1c29760	SM00490	helicase superfamily c-terminal domain
VAPA_1c29760	SM00982	VAPA_1c29760
VAPA_1c29760	SM01058	CarD-like/TRCF domain
VAPA_1c29820	SM00478	endonuclease III
VAPA_1c29840	SM00342	helix_turn_helix, arabinose operon control protein
VAPA_1c29850	SM00855	Phosphoglycerate mutase family
VAPA_1c30000	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c30100	SM00342	helix_turn_helix, arabinose operon control protein
VAPA_1c30170	SM00345	helix_turn_helix gluconate operon transcriptional repressor
VAPA_1c30170	SM00895	VAPA_1c30170
VAPA_1c30320	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c30430	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c30430	SM00464	Found in ATP-dependent protease La (LON)
VAPA_1c30440	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c30440	SM00994	ClpX C4-type zinc finger
VAPA_1c30440	SM01086	C-terminal, D2-small domain, of ClpB protein
VAPA_1c30620	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c30630	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c30640	SM00060	Fibronectin type 3 domain
VAPA_1c30670	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c30760	SM00448	cheY-homologous receiver domain
VAPA_1c30760	SM00862	Transcriptional regulatory protein, C terminal
VAPA_1c30770	SM00387	Histidine kinase-like ATPases
VAPA_1c30770	SM00388	His Kinase A (phosphoacceptor) domain
VAPA_1c30780	SM00363	S4 RNA-binding domain
VAPA_1c30810	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c30840	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
VAPA_1c30850	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
VAPA_1c30850	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
VAPA_1c30900	SM00861	Transketolase, pyrimidine binding domain
VAPA_1c30960	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c30970	SM00961	Ribulose bisphosphate carboxylase, small chain
VAPA_1c31050	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c31060	SM00564	beta-propeller repeat
VAPA_1c31080	SM00062	Bacterial periplasmic substrate-binding proteins
VAPA_1c31130	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c31160	SM00327	von Willebrand factor (vWF) type A domain
VAPA_1c31240	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
VAPA_1c31240	SM00387	Histidine kinase-like ATPases
VAPA_1c31250	SM00421	helix_turn_helix, Lux Regulon
VAPA_1c31250	SM00448	cheY-homologous receiver domain
VAPA_1c31410	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c31420	SM00905	Dihydroneopterin aldolase
VAPA_1c31570	SM00478	endonuclease III
VAPA_1c31580	SM00840	VAPA_1c31580
VAPA_1c31590	SM00028	Tetratricopeptide repeats
VAPA_1c31860	SM00481	DNA polymerase alpha chain like domain
VAPA_1c31870	SM00450	Rhodanese Homology Domain
VAPA_1c31880	SM00448	cheY-homologous receiver domain
VAPA_1c31880	SM00862	Transcriptional regulatory protein, C terminal
VAPA_1c31890	SM00387	Histidine kinase-like ATPases
VAPA_1c31890	SM00388	His Kinase A (phosphoacceptor) domain
VAPA_1c32020	SM00100	Cyclic nucleotide-monophosphate binding domain
VAPA_1c32020	SM00419	helix_turn_helix, cAMP Regulatory protein
VAPA_1c32040	SM01007	Class II Aldolase and Adducin N-terminal domain
VAPA_1c32080	SM01007	Class II Aldolase and Adducin N-terminal domain
VAPA_1c32140	SM01217	VAPA_1c32140
VAPA_1c32180	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c32260	SM00834	Putative regulatory protein
VAPA_1c32280	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c32290	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c32330	SM00387	Histidine kinase-like ATPases
VAPA_1c32330	SM00388	His Kinase A (phosphoacceptor) domain
VAPA_1c32330	SM00448	cheY-homologous receiver domain
VAPA_1c32340	SM00421	helix_turn_helix, Lux Regulon
VAPA_1c32340	SM00448	cheY-homologous receiver domain
VAPA_1c32370	SM00387	Histidine kinase-like ATPases
VAPA_1c32370	SM00388	His Kinase A (phosphoacceptor) domain
VAPA_1c32400	SM00342	helix_turn_helix, arabinose operon control protein
VAPA_1c32420	SM00062	Bacterial periplasmic substrate-binding proteins
VAPA_1c32560	SM00346	helix_turn_helix isocitrate lyase regulation
VAPA_1c32590	SM00822	VAPA_1c32590
VAPA_1c32630	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
VAPA_1c32770	SM00885	D5 N terminal like
VAPA_1c32830	SM00823	Phosphopantetheine attachment site
VAPA_1c32830	SM00825	Beta-ketoacyl synthase
VAPA_1c32830	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
VAPA_1c32840	SM00823	Phosphopantetheine attachment site
VAPA_1c32980	SM00421	helix_turn_helix, Lux Regulon
VAPA_1c32980	SM00448	cheY-homologous receiver domain
VAPA_1c33040	SM00481	DNA polymerase alpha chain like domain
VAPA_1c33130	SM00346	helix_turn_helix isocitrate lyase regulation
VAPA_1c33200	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c33270	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
VAPA_1c33280	SM01092	CO dehydrogenase flavoprotein C-terminal domain
VAPA_1c33330	SM00530	Helix-turn-helix XRE-family like proteins 
VAPA_1c33360	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
VAPA_1c33400	SM00855	Phosphoglycerate mutase family
VAPA_1c33410	SM00271	DnaJ molecular chaperone homology domain
VAPA_1c33550	SM00530	Helix-turn-helix XRE-family like proteins 
VAPA_1c33700	SM00882	Coenzyme A transferase
VAPA_1c33710	SM00882	Coenzyme A transferase
VAPA_1c33720	SM00091	PAS domain
VAPA_1c33720	SM00421	helix_turn_helix, Lux Regulon
VAPA_1c33870	SM00530	Helix-turn-helix XRE-family like proteins 
VAPA_1c33920	SM00014	Acid phosphatase homologues
VAPA_1c33940	SM00448	cheY-homologous receiver domain
VAPA_1c33940	SM00862	Transcriptional regulatory protein, C terminal
VAPA_1c33950	SM00387	Histidine kinase-like ATPases
VAPA_1c33950	SM00388	His Kinase A (phosphoacceptor) domain
VAPA_1c33970	SM00822	VAPA_1c33970
VAPA_1c34160	SM01144	VAPA_1c34160
VAPA_1c34320	SM00346	helix_turn_helix isocitrate lyase regulation
VAPA_1c34340	SM00448	cheY-homologous receiver domain
VAPA_1c34340	SM00862	Transcriptional regulatory protein, C terminal
VAPA_1c34350	SM00387	Histidine kinase-like ATPases
VAPA_1c34350	SM00388	His Kinase A (phosphoacceptor) domain
VAPA_1c34520	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
VAPA_1c34540	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
VAPA_1c34630	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c34640	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c34680	SM00893	Electron transfer flavoprotein domain
VAPA_1c34690	SM00893	Electron transfer flavoprotein domain
VAPA_1c34720	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c34740	SM00460	Transglutaminase/protease-like homologues
VAPA_1c34780	SM00825	Beta-ketoacyl synthase
VAPA_1c34810	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c34900	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c34910	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c34930	SM00419	helix_turn_helix, cAMP Regulatory protein
VAPA_1c34930	SM00420	helix_turn_helix, Deoxyribose operon repressor
VAPA_1c34930	SM01134	VAPA_1c34930
VAPA_1c34960	SM00287	Bacterial SH3 domain homologues
VAPA_1c35000	SM00849	Metallo-beta-lactamase superfamily
VAPA_1c35010	SM00460	Transglutaminase/protease-like homologues
VAPA_1c35030	SM00460	Transglutaminase/protease-like homologues
VAPA_1c35050	SM00091	PAS domain
VAPA_1c35050	SM00387	Histidine kinase-like ATPases
VAPA_1c35060	SM00421	helix_turn_helix, Lux Regulon
VAPA_1c35060	SM00448	cheY-homologous receiver domain
VAPA_1c35170	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c35190	SM00354	helix_turn _helix lactose operon repressor
VAPA_1c35230	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c35240	SM00062	Bacterial periplasmic substrate-binding proteins
VAPA_1c35240	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
VAPA_1c35320	SM00434	DNA Topoisomerase IV
VAPA_1c35330	SM00612	VAPA_1c35330
VAPA_1c35350	SM00387	Histidine kinase-like ATPases
VAPA_1c35350	SM00433	TopoisomeraseII
VAPA_1c35390	SM01130	VAPA_1c35390
VAPA_1c35410	SM00849	Metallo-beta-lactamase superfamily
VAPA_1c35530	SM01192	VAPA_1c35530
VAPA_1c35530	SM01193	VAPA_1c35530
VAPA_1c35700	SM00646	VAPA_1c35700
VAPA_1c35740	SM00853	MutL C terminal dimerisation domain
VAPA_1c35740	SM01340	VAPA_1c35740
VAPA_1c35770	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c35790	SM00345	helix_turn_helix gluconate operon transcriptional repressor
VAPA_1c35790	SM00895	VAPA_1c35790
VAPA_1c35810	SM00858	VAPA_1c35810
VAPA_1c35940	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c35950	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c36000	SM00347	helix_turn_helix multiple antibiotic resistance protein
VAPA_1c36010	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c36120	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
VAPA_1c36130	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
VAPA_1c36220	SM00829	Enoylreductase
VAPA_1c36230	SM00316	Ribosomal protein S1-like RNA-binding domain
VAPA_1c36230	SM00322	K homology RNA-binding domain
VAPA_1c36240	SM01387	VAPA_1c36240
VAPA_1c36300	SM01012	VAPA_1c36300
VAPA_1c36330	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c36340	SM01012	VAPA_1c36340
VAPA_1c36360	SM00220	Serine/Threonine protein kinases, catalytic domain
VAPA_1c36360	SM00331	Sigma factor PP2C-like phosphatases
VAPA_1c36360	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
VAPA_1c36390	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
VAPA_1c36430	SM00965	Secretin and TonB N terminus short domain
VAPA_1c36440	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c36600	SM00421	helix_turn_helix, Lux Regulon
VAPA_1c36650	SM00342	helix_turn_helix, arabinose operon control protein
VAPA_1c36690	SM00852	Probable molybdopterin binding domain
VAPA_1c36750	SM00448	cheY-homologous receiver domain
VAPA_1c36750	SM00862	Transcriptional regulatory protein, C terminal
VAPA_1c36760	SM00387	Histidine kinase-like ATPases
VAPA_1c36760	SM00388	His Kinase A (phosphoacceptor) domain
VAPA_1c36810	SM00422	helix_turn_helix, mercury resistance
VAPA_1c36870	SM00344	helix_turn_helix ASNC type
VAPA_1c36920	SM00347	helix_turn_helix multiple antibiotic resistance protein
VAPA_1c36970	SM00052	Putative diguanylate phosphodiesterase
VAPA_1c36970	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
VAPA_1c36970	SM00267	diguanylate cyclase
VAPA_1c36970	SM01079	VAPA_1c36970
VAPA_1c37020	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
VAPA_1c37070	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
VAPA_1c37070	SM00534	ATPase domain of DNA mismatch repair MUTS family
VAPA_1c37130	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c37170	SM00345	helix_turn_helix gluconate operon transcriptional repressor
VAPA_1c37180	SM00421	helix_turn_helix, Lux Regulon
VAPA_1c37180	SM00448	cheY-homologous receiver domain
VAPA_1c37210	SM00346	helix_turn_helix isocitrate lyase regulation
VAPA_1c37240	SM00062	Bacterial periplasmic substrate-binding proteins
VAPA_1c37340	SM00387	Histidine kinase-like ATPases
VAPA_1c37350	SM00448	cheY-homologous receiver domain
VAPA_1c37350	SM00850	LytTr DNA-binding domain
VAPA_1c37420	SM00850	LytTr DNA-binding domain
VAPA_1c37490	SM00116	Domain in cystathionine beta-synthase and other proteins.
VAPA_1c37510	SM00422	helix_turn_helix, mercury resistance
VAPA_1c37530	SM00822	VAPA_1c37530
VAPA_1c37540	SM00448	cheY-homologous receiver domain
VAPA_1c37590	SM00833	Cobalamin synthesis protein cobW C-terminal domain
VAPA_1c37810	SM00318	Staphylococcal nuclease homologues
VAPA_1c37850	SM00345	helix_turn_helix gluconate operon transcriptional repressor
VAPA_1c37850	SM00895	VAPA_1c37850
VAPA_1c37860	SM00062	Bacterial periplasmic substrate-binding proteins
VAPA_1c37890	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c38010	SM00422	helix_turn_helix, mercury resistance
VAPA_1c38030	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c38040	SM00487	DEAD-like helicases superfamily
VAPA_1c38040	SM00490	helicase superfamily c-terminal domain
VAPA_1c38080	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c38120	SM00345	helix_turn_helix gluconate operon transcriptional repressor
VAPA_1c38120	SM00895	VAPA_1c38120
VAPA_1c38160	SM01007	Class II Aldolase and Adducin N-terminal domain
VAPA_1c38210	SM00347	helix_turn_helix multiple antibiotic resistance protein
VAPA_1c38260	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c38470	SM00450	Rhodanese Homology Domain
VAPA_1c38510	SM00342	helix_turn_helix, arabinose operon control protein
VAPA_1c38510	SM00478	endonuclease III
VAPA_1c38510	SM01009	AlkA N-terminal domain
VAPA_1c38610	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c38640	SM01006	Siderophore biosynthesis protein domain
VAPA_1c38670	SM00823	Phosphopantetheine attachment site
VAPA_1c38670	SM00824	Thioesterase
VAPA_1c38680	SM00823	Phosphopantetheine attachment site
VAPA_1c38690	SM00823	Phosphopantetheine attachment site
VAPA_1c38690	SM01294	VAPA_1c38690
VAPA_1c38700	SM00822	VAPA_1c38700
VAPA_1c38700	SM00823	Phosphopantetheine attachment site
VAPA_1c38700	SM00825	Beta-ketoacyl synthase
VAPA_1c38700	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
VAPA_1c38710	SM00823	Phosphopantetheine attachment site
VAPA_1c38750	SM00923	MbtH-like protein
VAPA_1c38830	SM00014	Acid phosphatase homologues
VAPA_1c39020	SM01207	VAPA_1c39020
VAPA_1c39100	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c39120	SM00937	VAPA_1c39120
VAPA_1c39220	SM01092	CO dehydrogenase flavoprotein C-terminal domain
VAPA_1c39230	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
VAPA_1c39270	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
VAPA_1c39290	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
VAPA_1c39300	SM00345	helix_turn_helix gluconate operon transcriptional repressor
VAPA_1c39300	SM00866	VAPA_1c39300
VAPA_1c39310	SM00858	VAPA_1c39310
VAPA_1c39380	SM00346	helix_turn_helix isocitrate lyase regulation
VAPA_1c39410	SM00346	helix_turn_helix isocitrate lyase regulation
VAPA_1c39470	SM00346	helix_turn_helix isocitrate lyase regulation
VAPA_1c39500	SM00421	helix_turn_helix, Lux Regulon
VAPA_1c39530	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
VAPA_1c39570	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c39580	SM00062	Bacterial periplasmic substrate-binding proteins
VAPA_1c39600	SM00345	helix_turn_helix gluconate operon transcriptional repressor
VAPA_1c39660	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c39670	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c39720	SM00869	Autotransporter beta-domain
VAPA_1c39740	SM01091	Transporter associated domain
VAPA_1c39770	SM00345	helix_turn_helix gluconate operon transcriptional repressor
VAPA_1c39820	SM00062	Bacterial periplasmic substrate-binding proteins
VAPA_1c39840	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c39870	SM01007	Class II Aldolase and Adducin N-terminal domain
VAPA_1c39890	SM00062	Bacterial periplasmic substrate-binding proteins
VAPA_1c39930	SM00450	Rhodanese Homology Domain
VAPA_1c39950	SM00487	DEAD-like helicases superfamily
VAPA_1c39950	SM00490	helicase superfamily c-terminal domain
VAPA_1c40040	SM00342	helix_turn_helix, arabinose operon control protein
VAPA_1c40100	SM00829	Enoylreductase
VAPA_1c40120	SM00342	helix_turn_helix, arabinose operon control protein
VAPA_1c40230	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c40260	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
VAPA_1c40270	SM01092	CO dehydrogenase flavoprotein C-terminal domain
VAPA_1c40280	SM00923	MbtH-like protein
VAPA_1c40300	SM00823	Phosphopantetheine attachment site
VAPA_1c40420	SM00831	Cation transporter/ATPase, N-terminus
VAPA_1c40510	SM00345	helix_turn_helix gluconate operon transcriptional repressor
VAPA_1c40510	SM00895	VAPA_1c40510
VAPA_1c40550	SM00345	helix_turn_helix gluconate operon transcriptional repressor
VAPA_1c40550	SM00895	VAPA_1c40550
VAPA_1c40630	SM01130	VAPA_1c40630
VAPA_1c40650	SM00062	Bacterial periplasmic substrate-binding proteins
VAPA_1c40670	SM00317	SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain
VAPA_1c40670	SM00508	Cysteine-rich motif following a subset of SET domains
VAPA_1c40680	SM00346	helix_turn_helix isocitrate lyase regulation
VAPA_1c40750	SM00345	helix_turn_helix gluconate operon transcriptional repressor
VAPA_1c40750	SM00895	VAPA_1c40750
VAPA_1c40820	SM00091	PAS domain
VAPA_1c40820	SM00387	Histidine kinase-like ATPases
VAPA_1c40820	SM00388	His Kinase A (phosphoacceptor) domain
VAPA_1c40830	SM00421	helix_turn_helix, Lux Regulon
VAPA_1c40830	SM00448	cheY-homologous receiver domain
VAPA_1c40880	SM00345	helix_turn_helix gluconate operon transcriptional repressor
VAPA_1c40880	SM00895	VAPA_1c40880
VAPA_1c40970	SM00919	Malic enzyme, NAD binding domain
VAPA_1c40970	SM01274	VAPA_1c40970
VAPA_1c40980	SM01130	VAPA_1c40980
VAPA_1c41030	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c41140	SM00344	helix_turn_helix ASNC type
VAPA_1c41250	SM00450	Rhodanese Homology Domain
VAPA_1c41450	SM00421	helix_turn_helix, Lux Regulon
VAPA_1c41450	SM00448	cheY-homologous receiver domain
VAPA_1c41460	SM00387	Histidine kinase-like ATPases
VAPA_1c41460	SM01049	VAPA_1c41460
VAPA_1c41470	SM00450	Rhodanese Homology Domain
VAPA_1c41570	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c41580	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c41640	SM00342	helix_turn_helix, arabinose operon control protein
VAPA_1c41680	SM00481	DNA polymerase alpha chain like domain
VAPA_1c41730	SM00421	helix_turn_helix, Lux Regulon
VAPA_1c41730	SM00448	cheY-homologous receiver domain
VAPA_1c41740	SM00387	Histidine kinase-like ATPases
VAPA_1c41740	SM00388	His Kinase A (phosphoacceptor) domain
VAPA_1c41820	SM00463	Small MutS-related domain
VAPA_1c41860	SM00062	Bacterial periplasmic substrate-binding proteins
VAPA_1c41890	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c41980	SM00387	Histidine kinase-like ATPases
VAPA_1c41990	SM00448	cheY-homologous receiver domain
VAPA_1c42030	SM00822	VAPA_1c42030
VAPA_1c42140	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
VAPA_1c42200	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c42240	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
VAPA_1c42250	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
VAPA_1c42340	SM01329	VAPA_1c42340
VAPA_1c42360	SM00345	helix_turn_helix gluconate operon transcriptional repressor
VAPA_1c42360	SM00895	VAPA_1c42360
VAPA_1c42570	SM00450	Rhodanese Homology Domain
VAPA_1c42580	SM00855	Phosphoglycerate mutase family
VAPA_1c42590	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
VAPA_1c42590	SM00245	tail specific protease
VAPA_1c42620	SM00448	cheY-homologous receiver domain
VAPA_1c42630	SM00421	helix_turn_helix, Lux Regulon
VAPA_1c42630	SM00448	cheY-homologous receiver domain
VAPA_1c42640	SM00387	Histidine kinase-like ATPases
VAPA_1c42700	SM00749	bacterial OsmY and nodulation domain
VAPA_1c42730	SM01034	Sensors of blue-light using FAD
VAPA_1c42790	SM00834	Putative regulatory protein
VAPA_1c42830	SM00978	VAPA_1c42830
VAPA_1c42920	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c42970	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c42970	SM00962	SRP54-type protein, GTPase domain
VAPA_1c43010	SM00849	Metallo-beta-lactamase superfamily
VAPA_1c43020	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
VAPA_1c43020	SM00450	Rhodanese Homology Domain
VAPA_1c43070	SM00448	cheY-homologous receiver domain
VAPA_1c43080	SM00448	cheY-homologous receiver domain
VAPA_1c43100	SM00138	Methyltransferase, chemotaxis proteins 
VAPA_1c43120	SM00073	Histidine Phosphotransfer domain
VAPA_1c43120	SM00260	Two component signalling adaptor domain
VAPA_1c43120	SM00387	Histidine kinase-like ATPases
VAPA_1c43120	SM01231	VAPA_1c43120
VAPA_1c43280	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c43400	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
VAPA_1c43400	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
VAPA_1c43410	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
VAPA_1c43410	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
VAPA_1c43420	SM00260	Two component signalling adaptor domain
VAPA_1c43430	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
VAPA_1c43430	SM01049	VAPA_1c43430
VAPA_1c43440	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
VAPA_1c43450	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
VAPA_1c43450	SM00091	PAS domain
VAPA_1c43450	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
VAPA_1c43460	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
VAPA_1c43460	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
VAPA_1c43470	SM00260	Two component signalling adaptor domain
VAPA_1c43480	SM00047	Lysozyme subfamily 2
VAPA_1c43570	SM00858	VAPA_1c43570
VAPA_1c43600	SM00100	Cyclic nucleotide-monophosphate binding domain
VAPA_1c43600	SM00419	helix_turn_helix, cAMP Regulatory protein
VAPA_1c43630	SM00937	VAPA_1c43630
VAPA_1c43670	SM01091	Transporter associated domain
VAPA_1c43720	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
VAPA_1c43780	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c43900	SM00957	SecA DEAD-like domain
VAPA_1c43900	SM00958	SecA preprotein cross-linking domain
VAPA_1c43970	SM00421	helix_turn_helix, Lux Regulon
VAPA_1c43970	SM00448	cheY-homologous receiver domain
VAPA_1c43980	SM00387	Histidine kinase-like ATPases
VAPA_1c43980	SM00388	His Kinase A (phosphoacceptor) domain
VAPA_1c43980	SM00448	cheY-homologous receiver domain
VAPA_1c44040	SM00966	SpoVT / AbrB like domain 
VAPA_1c44050	SM00988	UreE urease accessory protein, N-terminal domain
VAPA_1c44140	SM00448	cheY-homologous receiver domain
VAPA_1c44140	SM00862	Transcriptional regulatory protein, C terminal
VAPA_1c44180	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
VAPA_1c44180	SM00387	Histidine kinase-like ATPases
VAPA_1c44180	SM00388	His Kinase A (phosphoacceptor) domain
VAPA_1c44190	SM00448	cheY-homologous receiver domain
VAPA_1c44190	SM00862	Transcriptional regulatory protein, C terminal
VAPA_1c44260	SM00411	bacterial (prokaryotic) histone like domain
VAPA_1c44870	SM00974	VAPA_1c44870
VAPA_1c44900	SM00729	Elongator protein 3, MiaB family, Radical SAM
VAPA_1c44930	SM00331	Sigma factor PP2C-like phosphatases
VAPA_1c44930	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
VAPA_1c44940	SM00220	Serine/Threonine protein kinases, catalytic domain
VAPA_1c44960	SM00072	Guanylate kinase homologues.
VAPA_1c44970	SM01409	VAPA_1c44970
VAPA_1c44980	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
VAPA_1c44980	SM00954	Region found in RelA / SpoT proteins
VAPA_1c45080	SM00478	endonuclease III
VAPA_1c45100	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
VAPA_1c45100	SM01232	VAPA_1c45100
VAPA_1c45110	SM00028	Tetratricopeptide repeats
VAPA_1c45150	SM01400	VAPA_1c45150
VAPA_1c45220	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c45230	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c45340	SM00855	Phosphoglycerate mutase family
VAPA_1c45390	SM00797	Allophanate hydrolase subunit 2
VAPA_1c45400	SM00796	Allophanate hydrolase subunit 1
VAPA_1c45470	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c45470	SM00962	SRP54-type protein, GTPase domain
VAPA_1c45470	SM00963	SRP54-type protein, helical bundle domain
VAPA_1c45490	SM00387	Histidine kinase-like ATPases
VAPA_1c45490	SM00388	His Kinase A (phosphoacceptor) domain
VAPA_1c45490	SM00448	cheY-homologous receiver domain
VAPA_1c45500	SM00421	helix_turn_helix, Lux Regulon
VAPA_1c45500	SM00448	cheY-homologous receiver domain
VAPA_1c45800	SM00347	helix_turn_helix multiple antibiotic resistance protein
VAPA_1c45890	SM00100	Cyclic nucleotide-monophosphate binding domain
VAPA_1c45900	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
VAPA_1c45940	SM00244	prohibitin homologues
VAPA_1c45950	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c46010	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
VAPA_1c46010	SM00387	Histidine kinase-like ATPases
VAPA_1c46010	SM00388	His Kinase A (phosphoacceptor) domain
VAPA_1c46030	SM00448	cheY-homologous receiver domain
VAPA_1c46030	SM00862	Transcriptional regulatory protein, C terminal
VAPA_1c46070	SM00422	helix_turn_helix, mercury resistance
VAPA_1c46100	SM00882	Coenzyme A transferase
VAPA_1c46110	SM00882	Coenzyme A transferase
VAPA_1c46120	SM00346	helix_turn_helix isocitrate lyase regulation
VAPA_1c46140	SM00421	helix_turn_helix, Lux Regulon
VAPA_1c46150	SM00028	Tetratricopeptide repeats
VAPA_1c46190	SM00858	VAPA_1c46190
VAPA_1c46250	SM00028	Tetratricopeptide repeats
VAPA_1c46300	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c46330	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c46430	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c46590	SM00881	CoA binding domain
VAPA_1c46630	SM00091	PAS domain
VAPA_1c46660	SM00100	Cyclic nucleotide-monophosphate binding domain
VAPA_1c46670	SM00749	bacterial OsmY and nodulation domain
VAPA_1c46790	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c46800	SM00567	E-Z type HEAT repeats
VAPA_1c46820	SM00327	von Willebrand factor (vWF) type A domain
VAPA_1c47080	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c47100	SM00112	Cadherin repeats.
VAPA_1c47100	SM00327	von Willebrand factor (vWF) type A domain
VAPA_1c47110	SM00342	helix_turn_helix, arabinose operon control protein
VAPA_1c47110	SM00448	cheY-homologous receiver domain
VAPA_1c47120	SM00342	helix_turn_helix, arabinose operon control protein
VAPA_1c47120	SM00448	cheY-homologous receiver domain
VAPA_1c47130	SM00448	cheY-homologous receiver domain
VAPA_1c47130	SM00862	Transcriptional regulatory protein, C terminal
VAPA_1c47140	SM00387	Histidine kinase-like ATPases
VAPA_1c47140	SM00388	His Kinase A (phosphoacceptor) domain
VAPA_1c47250	SM00530	Helix-turn-helix XRE-family like proteins 
VAPA_1c47260	SM00530	Helix-turn-helix XRE-family like proteins 
VAPA_1c47280	SM00487	DEAD-like helicases superfamily
VAPA_1c47280	SM00490	helicase superfamily c-terminal domain
VAPA_1c47290	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c47330	SM00974	VAPA_1c47330
VAPA_1c47380	SM00966	SpoVT / AbrB like domain 
VAPA_1c47460	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c47490	SM00342	helix_turn_helix, arabinose operon control protein
VAPA_1c47530	SM00563	Phosphate acyltransferases
VAPA_1c47570	SM00732	Likely ribonuclease with RNase H fold.
VAPA_1c47610	SM00421	helix_turn_helix, Lux Regulon
VAPA_1c47620	SM00073	Histidine Phosphotransfer domain
VAPA_1c47620	SM00260	Two component signalling adaptor domain
VAPA_1c47620	SM00387	Histidine kinase-like ATPases
VAPA_1c47620	SM00448	cheY-homologous receiver domain
VAPA_1c47620	SM01231	VAPA_1c47620
VAPA_1c47630	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
VAPA_1c47650	SM00448	cheY-homologous receiver domain
VAPA_1c47660	SM00448	cheY-homologous receiver domain
VAPA_1c47730	SM00798	AICARFT/IMPCHase bienzyme
VAPA_1c47730	SM00851	MGS-like domain
VAPA_1c47810	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c47830	SM00354	helix_turn _helix lactose operon repressor
VAPA_1c47950	SM00345	helix_turn_helix gluconate operon transcriptional repressor
VAPA_1c48010	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c48060	SM00563	Phosphate acyltransferases
VAPA_1c48090	SM00419	helix_turn_helix, cAMP Regulatory protein
VAPA_1c48110	SM00881	CoA binding domain
VAPA_1c48170	SM00278	Helix-hairpin-helix DNA-binding motif class 1
VAPA_1c48240	SM00363	S4 RNA-binding domain
VAPA_1c48350	SM00996	S-adenosyl-L-homocysteine hydrolase
VAPA_1c48350	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
VAPA_1c48390	SM00530	Helix-turn-helix XRE-family like proteins 
VAPA_1c48430	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c48480	SM00345	helix_turn_helix gluconate operon transcriptional repressor
VAPA_1c48500	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c48560	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c48700	SM00346	helix_turn_helix isocitrate lyase regulation
VAPA_1c48730	SM00878	Biotin carboxylase C-terminal domain
VAPA_1c48790	SM00342	helix_turn_helix, arabinose operon control protein
VAPA_1c48840	SM00369	Leucine-rich repeats, typical (most populated) subfamily
VAPA_1c48850	SM00849	Metallo-beta-lactamase superfamily
VAPA_1c48860	SM00422	helix_turn_helix, mercury resistance
VAPA_1c48870	SM00947	Carbonic anhydrase
VAPA_1c48950	SM00563	Phosphate acyltransferases
VAPA_1c48990	SM00046	Diacylglycerol kinase catalytic domain (presumed)
VAPA_1c49010	SM00014	Acid phosphatase homologues
VAPA_1c49020	SM00870	VAPA_1c49020
VAPA_1c49050	SM00947	Carbonic anhydrase
VAPA_1c49150	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c49190	SM01091	Transporter associated domain
VAPA_1c49210	SM00344	helix_turn_helix ASNC type
VAPA_1c49230	SM00062	Bacterial periplasmic substrate-binding proteins
VAPA_1c49260	SM00849	Metallo-beta-lactamase superfamily
VAPA_1c49370	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c49380	SM00155	Phospholipase D. Active site motifs.
VAPA_1c49480	SM00421	helix_turn_helix, Lux Regulon
VAPA_1c49580	SM00878	Biotin carboxylase C-terminal domain
VAPA_1c49710	SM00347	helix_turn_helix multiple antibiotic resistance protein
VAPA_1c49740	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
VAPA_1c49780	SM00344	helix_turn_helix ASNC type
VAPA_1c49830	SM00749	bacterial OsmY and nodulation domain
VAPA_1c49870	SM00346	helix_turn_helix isocitrate lyase regulation
VAPA_1c50130	SM00903	Flavin reductase like domain
VAPA_1c50180	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c50240	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c50330	SM00487	DEAD-like helicases superfamily
VAPA_1c50330	SM00490	helicase superfamily c-terminal domain
VAPA_1c50410	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c50450	SM00014	Acid phosphatase homologues
VAPA_1c50490	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c50530	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c50640	SM00729	Elongator protein 3, MiaB family, Radical SAM
VAPA_1c50690	SM00342	helix_turn_helix, arabinose operon control protein
VAPA_1c50720	SM00829	Enoylreductase
VAPA_1c50730	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
VAPA_1c50730	SM00387	Histidine kinase-like ATPases
VAPA_1c50730	SM00388	His Kinase A (phosphoacceptor) domain
VAPA_1c50740	SM00448	cheY-homologous receiver domain
VAPA_1c50740	SM00862	Transcriptional regulatory protein, C terminal
VAPA_1c50890	SM00322	K homology RNA-binding domain
VAPA_1c50920	SM01382	VAPA_1c50920
VAPA_1c50920	SM01383	VAPA_1c50920
VAPA_1c50980	SM01403	VAPA_1c50980
VAPA_1c51000	SM00838	Elongation factor G C-terminus
VAPA_1c51000	SM00889	Elongation factor G, domain IV
VAPA_1c51030	SM00936	Penicillin-binding protein 5, C-terminal domain 
VAPA_1c51080	SM01004	Delta-aminolevulinic acid dehydratase
VAPA_1c51140	SM00822	VAPA_1c51140
VAPA_1c51190	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c51200	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c51230	SM00342	helix_turn_helix, arabinose operon control protein
VAPA_1c51300	SM00257	Lysin motif
VAPA_1c51310	SM00450	Rhodanese Homology Domain
VAPA_1c51410	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c51470	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
VAPA_1c51540	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c51560	SM00347	helix_turn_helix multiple antibiotic resistance protein
VAPA_1c51660	SM00387	Histidine kinase-like ATPases
VAPA_1c51690	SM00829	Enoylreductase
VAPA_1c51720	SM00387	Histidine kinase-like ATPases
VAPA_1c51720	SM00388	His Kinase A (phosphoacceptor) domain
VAPA_1c51730	SM00448	cheY-homologous receiver domain
VAPA_1c51730	SM00862	Transcriptional regulatory protein, C terminal
VAPA_1c51750	SM00363	S4 RNA-binding domain
VAPA_1c51780	SM00195	Dual specificity phosphatase, catalytic domain
VAPA_1c51790	SM00829	Enoylreductase
VAPA_1c51800	SM00448	cheY-homologous receiver domain
VAPA_1c51800	SM00862	Transcriptional regulatory protein, C terminal
VAPA_1c51810	SM00387	Histidine kinase-like ATPases
VAPA_1c51810	SM00388	His Kinase A (phosphoacceptor) domain
VAPA_1c51900	SM00849	Metallo-beta-lactamase superfamily
VAPA_1c51940	SM00419	helix_turn_helix, cAMP Regulatory protein
VAPA_1c51960	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c52000	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c52080	SM00421	helix_turn_helix, Lux Regulon
VAPA_1c52090	SM00564	beta-propeller repeat
VAPA_1c52110	SM00564	beta-propeller repeat
VAPA_1c52130	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c52170	SM00062	Bacterial periplasmic substrate-binding proteins
VAPA_1c52220	SM00861	Transketolase, pyrimidine binding domain
VAPA_1c52230	SM00347	helix_turn_helix multiple antibiotic resistance protein
VAPA_1c52240	SM00822	VAPA_1c52240
VAPA_1c52300	SM00347	helix_turn_helix multiple antibiotic resistance protein
VAPA_1c52370	SM00662	RNA polymerases D
VAPA_1c52380	SM00363	S4 RNA-binding domain
VAPA_1c52380	SM01390	VAPA_1c52380
VAPA_1c52510	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
VAPA_1c52520	SM01374	VAPA_1c52520
VAPA_1c52590	SM00487	DEAD-like helicases superfamily
VAPA_1c52590	SM00490	helicase superfamily c-terminal domain
VAPA_1c52700	SM00563	Phosphate acyltransferases
VAPA_1c52720	SM00530	Helix-turn-helix XRE-family like proteins 
VAPA_1c52730	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
VAPA_1c52740	SM00986	Uracil DNA glycosylase superfamily
VAPA_1c52740	SM00987	UreE urease accessory protein, C-terminal domain 
VAPA_1c52780	SM00420	helix_turn_helix, Deoxyribose operon repressor
VAPA_1c52780	SM01134	VAPA_1c52780
VAPA_1c52840	SM01001	AIR carboxylase
VAPA_1c52890	SM00344	helix_turn_helix ASNC type
VAPA_1c52980	SM00849	Metallo-beta-lactamase superfamily
VAPA_1c53050	SM00257	Lysin motif
VAPA_1c53110	SM01323	VAPA_1c53110
VAPA_1c53130	SM00344	helix_turn_helix ASNC type
VAPA_1c53140	SM00062	Bacterial periplasmic substrate-binding proteins
VAPA_1c53140	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
VAPA_1c53240	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c53340	SM01007	Class II Aldolase and Adducin N-terminal domain
VAPA_1c53390	SM00345	helix_turn_helix gluconate operon transcriptional repressor
VAPA_1c53390	SM00895	VAPA_1c53390
VAPA_1c53410	SM00344	helix_turn_helix ASNC type
VAPA_1c53430	SM00925	MltA specific insert domain
VAPA_1c53460	SM00421	helix_turn_helix, Lux Regulon
VAPA_1c53460	SM00448	cheY-homologous receiver domain
VAPA_1c53470	SM00091	PAS domain
VAPA_1c53470	SM00387	Histidine kinase-like ATPases
VAPA_1c53470	SM00388	His Kinase A (phosphoacceptor) domain
VAPA_1c53610	SM01322	VAPA_1c53610
VAPA_1c53900	SM00984	UDP binding domain
VAPA_1c53940	SM00849	Metallo-beta-lactamase superfamily
VAPA_1c53950	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
VAPA_1c53950	SM01080	VAPA_1c53950
VAPA_1c53960	SM00240	Forkhead associated domain
VAPA_1c53970	SM00331	Sigma factor PP2C-like phosphatases
VAPA_1c53970	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
VAPA_1c53990	SM00881	CoA binding domain
VAPA_1c54010	SM00859	Semialdehyde dehydrogenase, NAD binding domain
VAPA_1c54030	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c54050	SM00448	cheY-homologous receiver domain
VAPA_1c54050	SM00862	Transcriptional regulatory protein, C terminal
VAPA_1c54060	SM00387	Histidine kinase-like ATPases
VAPA_1c54060	SM00388	His Kinase A (phosphoacceptor) domain
VAPA_1c54090	SM00317	SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain
VAPA_1c54100	SM00151	SWI complex, BAF60b domains
VAPA_1c54100	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
VAPA_1c54100	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
VAPA_1c54100	SM00493	VAPA_1c54100
VAPA_1c54170	SM00345	helix_turn_helix gluconate operon transcriptional repressor
VAPA_1c54210	SM00487	DEAD-like helicases superfamily
VAPA_1c54210	SM00490	helicase superfamily c-terminal domain
VAPA_1c54250	SM00345	helix_turn_helix gluconate operon transcriptional repressor
VAPA_1c54250	SM00895	VAPA_1c54250
VAPA_1c54310	SM01130	VAPA_1c54310
VAPA_1c54370	SM00345	helix_turn_helix gluconate operon transcriptional repressor
VAPA_1c54370	SM00895	VAPA_1c54370
VAPA_1c54420	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c54460	SM01007	Class II Aldolase and Adducin N-terminal domain
VAPA_1c54500	SM00345	helix_turn_helix gluconate operon transcriptional repressor
VAPA_1c54500	SM00895	VAPA_1c54500
VAPA_1c54530	SM00062	Bacterial periplasmic substrate-binding proteins
VAPA_1c54550	SM00382	ATPases associated with a variety of cellular activities
VAPA_1c54570	SM00880	VAPA_1c54570
VAPA_1c54570	SM01118	VAPA_1c54570
VAPA_1c54680	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
VAPA_1c54690	SM00861	Transketolase, pyrimidine binding domain
VAPA_1c54720	SM01011	Aminopeptidase P, N-terminal domain
VAPA_1c54800	SM00919	Malic enzyme, NAD binding domain
VAPA_1c54800	SM01274	VAPA_1c54800
VAPA_1c54840	SM00650	Ribosomal RNA adenine dimethylases
VAPA_1c55010	SM00360	RNA recognition motif
VAPA_1c55050	SM00116	Domain in cystathionine beta-synthase and other proteins.
VAPA_1c55080	SM00100	Cyclic nucleotide-monophosphate binding domain
VAPA_1c55110	SM01234	VAPA_1c55110
VAPA_2c00020	SM00470	ParB-like nuclease domain
VAPA_2c00030	SM00342	helix_turn_helix, arabinose operon control protein
VAPA_2c00040	SM00421	helix_turn_helix, Lux Regulon
VAPA_2c00080	SM00344	helix_turn_helix ASNC type
VAPA_2c00110	SM00342	helix_turn_helix, arabinose operon control protein
VAPA_2c00120	SM00873	B3/4 domain
VAPA_2c00170	SM00881	CoA binding domain
VAPA_2c00220	SM00342	helix_turn_helix, arabinose operon control protein
VAPA_2c00240	SM01012	VAPA_2c00240
VAPA_2c00280	SM00382	ATPases associated with a variety of cellular activities
VAPA_2c00290	SM00382	ATPases associated with a variety of cellular activities
VAPA_2c00390	SM00062	Bacterial periplasmic substrate-binding proteins
VAPA_2c00430	SM00345	helix_turn_helix gluconate operon transcriptional repressor
VAPA_2c00430	SM00895	VAPA_2c00430
VAPA_2c00460	SM00829	Enoylreductase
VAPA_2c00480	SM00345	helix_turn_helix gluconate operon transcriptional repressor
VAPA_2c00480	SM00895	VAPA_2c00480
VAPA_2c00500	SM00347	helix_turn_helix multiple antibiotic resistance protein
VAPA_2c00520	SM00822	VAPA_2c00520
VAPA_2c00540	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
VAPA_2c00550	SM01130	VAPA_2c00550
VAPA_2c00590	SM00382	ATPases associated with a variety of cellular activities
VAPA_2c00600	SM00382	ATPases associated with a variety of cellular activities
VAPA_2c00640	SM00345	helix_turn_helix gluconate operon transcriptional repressor
VAPA_2c00640	SM00895	VAPA_2c00640
VAPA_2c00750	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
VAPA_2c00970	SM00530	Helix-turn-helix XRE-family like proteins 
VAPA_2c01080	SM00822	VAPA_2c01080
VAPA_2c01170	SM00342	helix_turn_helix, arabinose operon control protein
VAPA_2c01230	SM00028	Tetratricopeptide repeats
VAPA_2c01410	SM00345	helix_turn_helix gluconate operon transcriptional repressor
VAPA_2c01410	SM00895	VAPA_2c01410
VAPA_2c01420	SM01329	VAPA_2c01420
VAPA_2c01540	SM00342	helix_turn_helix, arabinose operon control protein
VAPA_2c01620	SM00342	helix_turn_helix, arabinose operon control protein
VAPA_2c01730	SM00354	helix_turn _helix lactose operon repressor
VAPA_2c01760	SM00346	helix_turn_helix isocitrate lyase regulation
VAPA_2c01790	SM00345	helix_turn_helix gluconate operon transcriptional repressor
VAPA_2c01790	SM00895	VAPA_2c01790
VAPA_2c01840	SM00829	Enoylreductase
VAPA_2c01850	SM00903	Flavin reductase like domain
VAPA_2c01860	SM00345	helix_turn_helix gluconate operon transcriptional repressor
VAPA_2c01860	SM00895	VAPA_2c01860
VAPA_2c01930	SM00347	helix_turn_helix multiple antibiotic resistance protein
VAPA_2c01970	SM00267	diguanylate cyclase
VAPA_2c01980	SM00382	ATPases associated with a variety of cellular activities
VAPA_2c02100	SM00860	SMI1 / KNR4 family
VAPA_2c02170	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
VAPA_2c02200	SM01130	VAPA_2c02200
VAPA_2c02310	SM00530	Helix-turn-helix XRE-family like proteins 
VAPA_2c02350	SM00859	Semialdehyde dehydrogenase, NAD binding domain
VAPA_2c02520	SM01119	VAPA_2c02520
VAPA_2c02540	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
VAPA_2c02550	SM00422	helix_turn_helix, mercury resistance
VAPA_2c02570	SM01329	VAPA_2c02570
VAPA_2c02580	SM00382	ATPases associated with a variety of cellular activities
VAPA_2c02670	SM00344	helix_turn_helix ASNC type
VAPA_2c02710	SM00342	helix_turn_helix, arabinose operon control protein
VAPA_2c02890	SM00062	Bacterial periplasmic substrate-binding proteins
VAPA_2c02910	SM00345	helix_turn_helix gluconate operon transcriptional repressor
VAPA_2c02910	SM00895	VAPA_2c02910
VAPA_2c02980	SM00345	helix_turn_helix gluconate operon transcriptional repressor
VAPA_2c02980	SM00866	VAPA_2c02980
VAPA_2c02990	SM00998	Adenylosuccinate lyase C-terminus
VAPA_2c03030	SM00344	helix_turn_helix ASNC type
VAPA_2c03280	SM00849	Metallo-beta-lactamase superfamily
VAPA_2c03280	SM01027	Beta-Casp domain
VAPA_2c03290	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
VAPA_2c03290	SM00091	PAS domain
VAPA_2c03290	SM00387	Histidine kinase-like ATPases
VAPA_2c03290	SM00388	His Kinase A (phosphoacceptor) domain
VAPA_2c03290	SM00448	cheY-homologous receiver domain
VAPA_2c03300	SM00448	cheY-homologous receiver domain
VAPA_2c03300	SM00862	Transcriptional regulatory protein, C terminal
VAPA_2c03310	SM00829	Enoylreductase
VAPA_2c03320	SM00749	bacterial OsmY and nodulation domain
VAPA_2c03350	SM00881	CoA binding domain
VAPA_2c03370	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
VAPA_2c03440	SM00822	VAPA_2c03440
VAPA_2c03450	SM00749	bacterial OsmY and nodulation domain
VAPA_2c03470	SM00100	Cyclic nucleotide-monophosphate binding domain
VAPA_2c03470	SM00419	helix_turn_helix, cAMP Regulatory protein
VAPA_2c03490	SM00749	bacterial OsmY and nodulation domain
VAPA_2c03520	SM00382	ATPases associated with a variety of cellular activities
VAPA_2c03520	SM00464	Found in ATP-dependent protease La (LON)
VAPA_2c03550	SM00116	Domain in cystathionine beta-synthase and other proteins.
VAPA_2c03590	SM00822	VAPA_2c03590
VAPA_2c03630	SM00382	ATPases associated with a variety of cellular activities
VAPA_2c03640	SM00382	ATPases associated with a variety of cellular activities
VAPA_2c03720	SM00342	helix_turn_helix, arabinose operon control protein
VAPA_2c03740	SM00345	helix_turn_helix gluconate operon transcriptional repressor
VAPA_2c03740	SM00895	VAPA_2c03740
VAPA_2c03760	SM00382	ATPases associated with a variety of cellular activities
VAPA_2c03790	SM00387	Histidine kinase-like ATPases
VAPA_2c03790	SM00388	His Kinase A (phosphoacceptor) domain
VAPA_2c03800	SM00448	cheY-homologous receiver domain
VAPA_2c03800	SM00862	Transcriptional regulatory protein, C terminal
VAPA_2c03820	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
VAPA_2c03830	SM00849	Metallo-beta-lactamase superfamily
VAPA_2c03840	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
VAPA_2c03860	SM00831	Cation transporter/ATPase, N-terminus
VAPA_2c03900	SM00382	ATPases associated with a variety of cellular activities
VAPA_2c03970	SM00382	ATPases associated with a variety of cellular activities
VAPA_2c04080	SM00448	cheY-homologous receiver domain
VAPA_2c04080	SM00862	Transcriptional regulatory protein, C terminal
VAPA_2c04090	SM00387	Histidine kinase-like ATPases
VAPA_2c04090	SM00388	His Kinase A (phosphoacceptor) domain
VAPA_2c04100	SM00749	bacterial OsmY and nodulation domain
VAPA_2c04110	SM00278	Helix-hairpin-helix DNA-binding motif class 1
VAPA_2c04110	SM00481	DNA polymerase alpha chain like domain
VAPA_2c04110	SM00483	DNA polymerase X family
VAPA_2c04150	SM00861	Transketolase, pyrimidine binding domain
VAPA_2c04220	SM00387	Histidine kinase-like ATPases
VAPA_2c04230	SM00116	Domain in cystathionine beta-synthase and other proteins.
VAPA_2c04270	SM00116	Domain in cystathionine beta-synthase and other proteins.
VAPA_2c04290	SM00854	Bacterial capsule synthesis protein PGA_cap
VAPA_2c04320	SM00829	Enoylreductase
VAPA_2c04450	SM00563	Phosphate acyltransferases
VAPA_2c04490	SM00947	Carbonic anhydrase
VAPA_2c04540	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
VAPA_2c04630	SM00382	ATPases associated with a variety of cellular activities
VAPA_2c04770	SM00831	Cation transporter/ATPase, N-terminus
VAPA_2c04810	SM00749	bacterial OsmY and nodulation domain
VAPA_2c04850	SM01400	VAPA_2c04850
VAPA_2c04860	SM00382	ATPases associated with a variety of cellular activities
VAPA_2c04880	SM00116	Domain in cystathionine beta-synthase and other proteins.
VAPA_2c04910	SM01400	VAPA_2c04910
VAPA_2c05000	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
VAPA_2c05020	SM00387	Histidine kinase-like ATPases
VAPA_2c05040	SM00100	Cyclic nucleotide-monophosphate binding domain
VAPA_2c05040	SM00419	helix_turn_helix, cAMP Regulatory protein
VAPA_2c05120	SM00028	Tetratricopeptide repeats
VAPA_2c05140	SM00838	Elongation factor G C-terminus
VAPA_2c05140	SM00889	Elongation factor G, domain IV
VAPA_2c05200	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
VAPA_2c05210	SM00345	helix_turn_helix gluconate operon transcriptional repressor
VAPA_2c05210	SM00866	VAPA_2c05210
VAPA_2c05230	SM00382	ATPases associated with a variety of cellular activities
VAPA_2c05240	SM00062	Bacterial periplasmic substrate-binding proteins
VAPA_2c05620	SM00895	VAPA_2c05620
VAPA_2c05620	SM00903	Flavin reductase like domain
VAPA_2c05660	SM00881	CoA binding domain
VAPA_2c05750	SM00342	helix_turn_helix, arabinose operon control protein
VAPA_2c05770	SM01092	CO dehydrogenase flavoprotein C-terminal domain
VAPA_2c05780	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
VAPA_2c05840	SM00998	Adenylosuccinate lyase C-terminus
VAPA_2c05930	SM00387	Histidine kinase-like ATPases
VAPA_2c05930	SM00388	His Kinase A (phosphoacceptor) domain
VAPA_2c05940	SM00382	ATPases associated with a variety of cellular activities
VAPA_2c05940	SM00448	cheY-homologous receiver domain
VAPA_2c06020	SM00116	Domain in cystathionine beta-synthase and other proteins.
VAPA_2c06080	SM00387	Histidine kinase-like ATPases
VAPA_2c06110	SM00823	Phosphopantetheine attachment site
VAPA_2c06130	SM00382	ATPases associated with a variety of cellular activities
VAPA_2c06140	SM00382	ATPases associated with a variety of cellular activities
VAPA_2c06190	SM00342	helix_turn_helix, arabinose operon control protein
VAPA_2c06320	SM00382	ATPases associated with a variety of cellular activities
VAPA_2c06360	SM00342	helix_turn_helix, arabinose operon control protein
VAPA_2c06370	SM00421	helix_turn_helix, Lux Regulon
VAPA_2c06530	SM00382	ATPases associated with a variety of cellular activities
VAPA_2c06530	SM00448	cheY-homologous receiver domain
VAPA_2c06540	SM00387	Histidine kinase-like ATPases
VAPA_2c06540	SM00388	His Kinase A (phosphoacceptor) domain
VAPA_2c06560	SM00822	VAPA_2c06560
VAPA_2c06630	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
VAPA_2c06670	SM00382	ATPases associated with a variety of cellular activities
VAPA_2c06690	SM00345	helix_turn_helix gluconate operon transcriptional repressor
VAPA_2c06690	SM00895	VAPA_2c06690
VAPA_2c06730	SM00028	Tetratricopeptide repeats
VAPA_2c06730	SM00862	Transcriptional regulatory protein, C terminal
VAPA_2c06740	SM00895	VAPA_2c06740
VAPA_2c06780	SM00849	Metallo-beta-lactamase superfamily
VAPA_2c06790	SM00346	helix_turn_helix isocitrate lyase regulation
VAPA_2c06800	SM00346	helix_turn_helix isocitrate lyase regulation
VAPA_2c06870	SM00420	helix_turn_helix, Deoxyribose operon repressor
VAPA_2c06870	SM01134	VAPA_2c06870
VAPA_2c06880	SM01133	VAPA_2c06880
VAPA_2c06940	SM00382	ATPases associated with a variety of cellular activities
VAPA_2c06990	SM00849	Metallo-beta-lactamase superfamily
VAPA_2c07000	SM00382	ATPases associated with a variety of cellular activities
VAPA_2c07010	SM00382	ATPases associated with a variety of cellular activities
VAPA_2c07060	SM00346	helix_turn_helix isocitrate lyase regulation
VAPA_2c07190	SM00448	cheY-homologous receiver domain
VAPA_2c07190	SM00862	Transcriptional regulatory protein, C terminal
VAPA_2c07200	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
VAPA_2c07200	SM00387	Histidine kinase-like ATPases
VAPA_2c07200	SM00388	His Kinase A (phosphoacceptor) domain
VAPA_2c07260	SM00062	Bacterial periplasmic substrate-binding proteins
VAPA_2c07270	SM00382	ATPases associated with a variety of cellular activities
VAPA_2c07300	SM00822	VAPA_2c07300
VAPA_2c07330	SM00797	Allophanate hydrolase subunit 2
VAPA_2c07340	SM00796	Allophanate hydrolase subunit 1
VAPA_2c07350	SM00878	Biotin carboxylase C-terminal domain
VAPA_2c07530	SM00342	helix_turn_helix, arabinose operon control protein
VAPA_2c07570	SM00116	Domain in cystathionine beta-synthase and other proteins.
VAPA_2c07580	SM00448	cheY-homologous receiver domain
VAPA_2c07610	SM00382	ATPases associated with a variety of cellular activities
VAPA_2c07670	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
VAPA_2c07690	SM00387	Histidine kinase-like ATPases
VAPA_2c07690	SM00388	His Kinase A (phosphoacceptor) domain
VAPA_2c07690	SM00448	cheY-homologous receiver domain
VAPA_2c07700	SM00421	helix_turn_helix, Lux Regulon
VAPA_2c07700	SM00448	cheY-homologous receiver domain
VAPA_2c07710	SM00912	haemagglutination activity domain
VAPA_2c07810	SM00421	helix_turn_helix, Lux Regulon
VAPA_2c07980	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
VAPA_2c07980	SM00387	Histidine kinase-like ATPases
VAPA_2c07980	SM00388	His Kinase A (phosphoacceptor) domain
VAPA_2c07990	SM00448	cheY-homologous receiver domain
VAPA_2c07990	SM00862	Transcriptional regulatory protein, C terminal
VAPA_2c08000	SM00345	helix_turn_helix gluconate operon transcriptional repressor
VAPA_2c08000	SM00895	VAPA_2c08000
VAPA_2c08060	SM01236	VAPA_2c08060
VAPA_2c08130	SM00382	ATPases associated with a variety of cellular activities
VAPA_2c08230	SM00382	ATPases associated with a variety of cellular activities
VAPA_2c08400	SM00903	Flavin reductase like domain
VAPA_2c08430	SM00342	helix_turn_helix, arabinose operon control protein
VAPA_2c08440	SM00829	Enoylreductase
VAPA_2c08500	SM00346	helix_turn_helix isocitrate lyase regulation
VAPA_2c08540	SM00062	Bacterial periplasmic substrate-binding proteins
VAPA_2c08560	SM00382	ATPases associated with a variety of cellular activities
VAPA_2c08580	SM00900	VAPA_2c08580
VAPA_2c08610	SM00564	beta-propeller repeat
VAPA_2c08630	SM00849	Metallo-beta-lactamase superfamily
VAPA_2c08700	SM00862	Transcriptional regulatory protein, C terminal
VAPA_2c08710	SM00862	Transcriptional regulatory protein, C terminal
VAPA_2c08720	SM00421	helix_turn_helix, Lux Regulon
VAPA_2c08730	SM00421	helix_turn_helix, Lux Regulon
VAPA_2c08770	SM00387	Histidine kinase-like ATPases
VAPA_2c08770	SM00388	His Kinase A (phosphoacceptor) domain
VAPA_2c08790	SM00862	Transcriptional regulatory protein, C terminal
VAPA_2c08960	SM00342	helix_turn_helix, arabinose operon control protein
VAPA_2c09110	SM00867	YceI-like domain 
VAPA_2c09130	SM01060	VAPA_2c09130
VAPA_2c09170	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
VAPA_2c09200	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
VAPA_2c09550	SM00912	haemagglutination activity domain
VAPA_2c09600	SM00345	helix_turn_helix gluconate operon transcriptional repressor
VAPA_2c09600	SM00866	VAPA_2c09600
VAPA_2c09640	SM00346	helix_turn_helix isocitrate lyase regulation
VAPA_2c09700	SM00347	helix_turn_helix multiple antibiotic resistance protein
VAPA_2c09820	SM00346	helix_turn_helix isocitrate lyase regulation
VAPA_2c09830	SM00346	helix_turn_helix isocitrate lyase regulation
VAPA_2c09870	SM00829	Enoylreductase
VAPA_2c10100	SM01119	VAPA_2c10100
VAPA_2c10150	SM00387	Histidine kinase-like ATPases
VAPA_2c10150	SM01080	VAPA_2c10150
VAPA_2c10170	SM00448	cheY-homologous receiver domain
VAPA_2c10170	SM00862	Transcriptional regulatory protein, C terminal
VAPA_2c10300	SM00421	helix_turn_helix, Lux Regulon
VAPA_2c10310	SM00421	helix_turn_helix, Lux Regulon
VAPA_2c10420	SM00382	ATPases associated with a variety of cellular activities
VAPA_2c10430	SM00382	ATPases associated with a variety of cellular activities
VAPA_2c10520	SM00342	helix_turn_helix, arabinose operon control protein
VAPA_2c10530	SM01060	VAPA_2c10530
VAPA_2c10660	SM00342	helix_turn_helix, arabinose operon control protein
VAPA_2c10700	SM00346	helix_turn_helix isocitrate lyase regulation
VAPA_2c10720	SM00486	DNA polymerase type-B family
VAPA_2c10760	SM00062	Bacterial periplasmic substrate-binding proteins
VAPA_2c10890	SM00342	helix_turn_helix, arabinose operon control protein
VAPA_2c10930	SM00155	Phospholipase D. Active site motifs.
VAPA_2c10950	SM00972	Spore Coat Protein U domain
VAPA_2c10980	SM00972	Spore Coat Protein U domain
VAPA_2c10990	SM00387	Histidine kinase-like ATPases
VAPA_2c11010	SM00507	HNH nucleases
VAPA_2c11060	SM00849	Metallo-beta-lactamase superfamily
VAPA_2c11070	SM00346	helix_turn_helix isocitrate lyase regulation
VAPA_2c11090	SM00998	Adenylosuccinate lyase C-terminus
VAPA_2c11110	SM00450	Rhodanese Homology Domain
VAPA_2c11140	SM00421	helix_turn_helix, Lux Regulon
VAPA_2c11140	SM00448	cheY-homologous receiver domain
VAPA_2c11150	SM00387	Histidine kinase-like ATPases
VAPA_2c11150	SM00388	His Kinase A (phosphoacceptor) domain
VAPA_2c11150	SM00448	cheY-homologous receiver domain
VAPA_2c11310	SM00470	ParB-like nuclease domain
VAPA_2c11340	SM00347	helix_turn_helix multiple antibiotic resistance protein
VAPA_2c11410	SM00382	ATPases associated with a variety of cellular activities
VAPA_2c11440	SM00342	helix_turn_helix, arabinose operon control protein
VAPA_2c11460	SM00052	Putative diguanylate phosphodiesterase
VAPA_2c11460	SM00267	diguanylate cyclase
VAPA_2c11460	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
VAPA_2c11480	SM00052	Putative diguanylate phosphodiesterase
VAPA_2c11480	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
VAPA_2c11480	SM00267	diguanylate cyclase
VAPA_2c11490	SM00387	Histidine kinase-like ATPases
VAPA_2c11500	SM00897	FIST N domain
VAPA_2c11500	SM01204	VAPA_2c11500
VAPA_2c11530	SM00345	helix_turn_helix gluconate operon transcriptional repressor
VAPA_2c11530	SM00866	VAPA_2c11530
VAPA_2c11580	SM00382	ATPases associated with a variety of cellular activities
VAPA_2c11590	SM00382	ATPases associated with a variety of cellular activities
VAPA_2c11610	SM00382	ATPases associated with a variety of cellular activities
VAPA_2c11740	SM00382	ATPases associated with a variety of cellular activities
VAPA_2c11800	SM00382	ATPases associated with a variety of cellular activities
VAPA_2c11840	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
VAPA_2c12100	SM00347	helix_turn_helix multiple antibiotic resistance protein
VAPA_2c12170	SM00382	ATPases associated with a variety of cellular activities
VAPA_2c12200	SM00421	helix_turn_helix, Lux Regulon
VAPA_2c12250	SM00382	ATPases associated with a variety of cellular activities
VAPA_2c12280	SM00530	Helix-turn-helix XRE-family like proteins 
VAPA_2c12290	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
VAPA_2c12300	SM00382	ATPases associated with a variety of cellular activities
VAPA_2c12310	SM00382	ATPases associated with a variety of cellular activities
VAPA_2c12410	SM00829	Enoylreductase
VAPA_2c12500	SM00387	Histidine kinase-like ATPases
VAPA_2c12530	SM00382	ATPases associated with a variety of cellular activities
VAPA_2c12630	SM00267	diguanylate cyclase
VAPA_2c12690	SM00530	Helix-turn-helix XRE-family like proteins 
VAPA_2c12730	SM00014	Acid phosphatase homologues
VAPA_2c12760	SM00530	Helix-turn-helix XRE-family like proteins 
VAPA_2c12840	SM00530	Helix-turn-helix XRE-family like proteins 
VAPA_2c12880	SM00830	Chorismate mutase type II
VAPA_2c12940	SM00382	ATPases associated with a variety of cellular activities
VAPA_2c12980	SM00062	Bacterial periplasmic substrate-binding proteins
VAPA_2c13000	SM00530	Helix-turn-helix XRE-family like proteins 
VAPA_2c13050	SM00530	Helix-turn-helix XRE-family like proteins 
VAPA_2c13060	SM00530	Helix-turn-helix XRE-family like proteins 
VAPA_2c13130	SM00487	DEAD-like helicases superfamily
VAPA_2c13160	SM00530	Helix-turn-helix XRE-family like proteins 
