locus-tag class description GOQ09_00005 PF11638 DnaA N-terminal domain GOQ09_00005 PF08299 Bacterial dnaA protein helix-turn-helix GOQ09_00005 PF00308 Bacterial dnaA protein GOQ09_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain GOQ09_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain GOQ09_00010 PF02767 DNA polymerase III beta subunit, central domain GOQ09_00015 PF00986 DNA gyrase B subunit, carboxyl terminus GOQ09_00015 PF18053 DNA gyrase B subunit insert domain GOQ09_00015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GOQ09_00015 PF01751 Toprim domain GOQ09_00015 PF00204 DNA gyrase B GOQ09_00030 PF01389 OmpA-like transmembrane domain GOQ09_00030 PF00691 OmpA family GOQ09_00055 PF00149 Calcineurin-like phosphoesterase GOQ09_00065 PF09411 Lipid A 3-O-deacylase (PagL) GOQ09_00070 PF03706 Lysylphosphatidylglycerol synthase TM region GOQ09_00075 PF13091 PLD-like domain GOQ09_00080 PF03372 Endonuclease/Exonuclease/phosphatase family GOQ09_00100 PF02678 Pirin GOQ09_00100 PF05726 Pirin C-terminal cupin domain GOQ09_00110 PF00912 Transglycosylase GOQ09_00130 PF06123 Inner membrane protein CreD GOQ09_00135 PF17092 Penicillin-binding protein OB-like domain GOQ09_00135 PF00912 Transglycosylase GOQ09_00135 PF00905 Penicillin binding protein transpeptidase domain GOQ09_00145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GOQ09_00145 PF00672 HAMP domain GOQ09_00145 PF00512 His Kinase A (phospho-acceptor) domain GOQ09_00150 PF00486 Transcriptional regulatory protein, C terminal GOQ09_00150 PF00072 Response regulator receiver domain GOQ09_00160 PF09278 MerR, DNA binding GOQ09_00160 PF00376 MerR family regulatory protein GOQ09_00165 PF00403 Heavy-metal-associated domain GOQ09_00170 PF00403 Heavy-metal-associated domain GOQ09_00175 PF00583 Acetyltransferase (GNAT) family GOQ09_00180 PF02801 Beta-ketoacyl synthase, C-terminal domain GOQ09_00180 PF00109 Beta-ketoacyl synthase, N-terminal domain GOQ09_00185 PF00550 Phosphopantetheine attachment site GOQ09_00195 PF00486 Transcriptional regulatory protein, C terminal GOQ09_00195 PF00072 Response regulator receiver domain GOQ09_00210 PF00724 NADH:flavin oxidoreductase / NADH oxidase family GOQ09_00220 PF00378 Enoyl-CoA hydratase/isomerase GOQ09_00225 PF02798 Glutathione S-transferase, N-terminal domain GOQ09_00225 PF00043 Glutathione S-transferase, C-terminal domain GOQ09_00240 PF01134 Glucose inhibited division protein A GOQ09_00240 PF13932 GidA associated domain GOQ09_00245 PF02527 rRNA small subunit methyltransferase G GOQ09_00250 PF01810 LysE type translocator GOQ09_00255 PF13614 AAA domain GOQ09_00265 PF17762 HTH domain found in ParB protein GOQ09_00265 PF02195 ParB-like nuclease domain GOQ09_00275 PF02913 FAD linked oxidases, C-terminal domain GOQ09_00275 PF01565 FAD binding domain GOQ09_00285 PF01923 Cobalamin adenosyltransferase GOQ09_00300 PF13472 GDSL-like Lipase/Acylhydrolase family GOQ09_00320 PF03466 LysR substrate binding domain GOQ09_00320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_00335 PF03776 Septum formation topological specificity factor MinE GOQ09_00340 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain GOQ09_00345 PF03775 Septum formation inhibitor MinC, C-terminal domain GOQ09_00345 PF05209 Septum formation inhibitor MinC, N-terminal domain GOQ09_00350 PF00860 Permease family GOQ09_00355 PF03061 Thioesterase superfamily GOQ09_00365 PF01979 Amidohydrolase family GOQ09_00375 PF07690 Major Facilitator Superfamily GOQ09_00380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_00380 PF03466 LysR substrate binding domain GOQ09_00385 PF13193 AMP-binding enzyme C-terminal domain GOQ09_00385 PF00501 AMP-binding enzyme GOQ09_00390 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain GOQ09_00390 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GOQ09_00395 PF03401 Tripartite tricarboxylate transporter family receptor GOQ09_00400 PF05853 beta-keto acid cleavage enzyme GOQ09_00410 PF01361 Tautomerase enzyme GOQ09_00420 PF03466 LysR substrate binding domain GOQ09_00420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_00425 PF07519 Tannase and feruloyl esterase GOQ09_00430 PF02311 AraC-like ligand binding domain GOQ09_00430 PF12833 Helix-turn-helix domain GOQ09_00435 PF00005 ABC transporter GOQ09_00440 PF12399 Branched-chain amino acid ATP-binding cassette transporter GOQ09_00440 PF00005 ABC transporter GOQ09_00450 PF02653 Branched-chain amino acid transport system / permease component GOQ09_00460 PF00561 alpha/beta hydrolase fold GOQ09_00465 PF13193 AMP-binding enzyme C-terminal domain GOQ09_00465 PF00501 AMP-binding enzyme GOQ09_00480 PF01202 Shikimate kinase GOQ09_00525 PF07992 Pyridine nucleotide-disulphide oxidoreductase GOQ09_00540 PF04199 Putative cyclase GOQ09_00545 PF00528 Binding-protein-dependent transport system inner membrane component GOQ09_00550 PF00528 Binding-protein-dependent transport system inner membrane component GOQ09_00555 PF00005 ABC transporter GOQ09_00570 PF00501 AMP-binding enzyme GOQ09_00570 PF13193 AMP-binding enzyme C-terminal domain GOQ09_00575 PF00211 Adenylate and Guanylate cyclase catalytic domain GOQ09_00575 PF00672 HAMP domain GOQ09_00575 PF02743 Cache domain GOQ09_00580 PF09859 Oxygenase, catalysing oxidative methylation of damaged DNA GOQ09_00585 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV GOQ09_00590 PF03466 LysR substrate binding domain GOQ09_00590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_00595 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GOQ09_00595 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GOQ09_00595 PF02770 Acyl-CoA dehydrogenase, middle domain GOQ09_00600 PF02515 CoA-transferase family III GOQ09_00630 PF03167 Uracil DNA glycosylase superfamily GOQ09_00645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_00645 PF03466 LysR substrate binding domain GOQ09_00650 PF00795 Carbon-nitrogen hydrolase GOQ09_00660 PF04960 Glutaminase GOQ09_00670 PF01613 Flavin reductase like domain GOQ09_00675 PF03401 Tripartite tricarboxylate transporter family receptor GOQ09_00685 PF13193 AMP-binding enzyme C-terminal domain GOQ09_00685 PF00501 AMP-binding enzyme GOQ09_00690 PF00108 Thiolase, N-terminal domain GOQ09_00690 PF02803 Thiolase, C-terminal domain GOQ09_00700 PF07670 Nucleoside recognition GOQ09_00705 PF13091 PLD-like domain GOQ09_00715 PF03466 LysR substrate binding domain GOQ09_00715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_00725 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain GOQ09_00725 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain GOQ09_00730 PF13291 ACT domain GOQ09_00730 PF00291 Pyridoxal-phosphate dependent enzyme GOQ09_00735 PF01434 Peptidase family M41 GOQ09_00735 PF17862 AAA+ lid domain GOQ09_00735 PF00004 ATPase family associated with various cellular activities (AAA) GOQ09_00745 PF01156 Inosine-uridine preferring nucleoside hydrolase GOQ09_00750 PF00270 DEAD/DEAH box helicase GOQ09_00750 PF00271 Helicase conserved C-terminal domain GOQ09_00750 PF16124 RecQ zinc-binding GOQ09_00750 PF00570 HRDC domain GOQ09_00750 PF09382 RQC domain GOQ09_00760 PF00528 Binding-protein-dependent transport system inner membrane component GOQ09_00765 PF00005 ABC transporter GOQ09_00770 PF07702 UTRA domain GOQ09_00770 PF00392 Bacterial regulatory proteins, gntR family GOQ09_00775 PF00221 Aromatic amino acid lyase GOQ09_00780 PF17391 Urocanase N-terminal domain GOQ09_00780 PF17392 Urocanase C-terminal domain GOQ09_00780 PF01175 Urocanase Rossmann-like domain GOQ09_00800 PF05962 HutD GOQ09_00805 PF01979 Amidohydrolase family GOQ09_00810 PF01979 Amidohydrolase family GOQ09_00820 PF00809 Pterin binding enzyme GOQ09_00820 PF02965 Vitamin B12 dependent methionine synthase, activation domain GOQ09_00820 PF02607 B12 binding domain GOQ09_00820 PF02310 B12 binding domain GOQ09_00820 PF02574 Homocysteine S-methyltransferase GOQ09_00830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_00830 PF03466 LysR substrate binding domain GOQ09_00840 PF02607 B12 binding domain GOQ09_00840 PF02965 Vitamin B12 dependent methionine synthase, activation domain GOQ09_00840 PF02310 B12 binding domain GOQ09_00840 PF00809 Pterin binding enzyme GOQ09_00840 PF02574 Homocysteine S-methyltransferase GOQ09_00860 PF01979 Amidohydrolase family GOQ09_00865 PF17938 Tetracyclin repressor-like, C-terminal domain GOQ09_00865 PF00440 Bacterial regulatory proteins, tetR family GOQ09_00870 PF00970 Oxidoreductase FAD-binding domain GOQ09_00870 PF00175 Oxidoreductase NAD-binding domain GOQ09_00875 PF00037 4Fe-4S binding domain GOQ09_00895 PF13458 Periplasmic binding protein GOQ09_00905 PF00005 ABC transporter GOQ09_00905 PF12399 Branched-chain amino acid ATP-binding cassette transporter GOQ09_00910 PF00005 ABC transporter GOQ09_00915 PF00857 Isochorismatase family GOQ09_00925 PF00111 2Fe-2S iron-sulfur cluster binding domain GOQ09_00925 PF01799 [2Fe-2S] binding domain GOQ09_00930 PF00034 Cytochrome c GOQ09_00930 PF13442 Cytochrome C oxidase, cbb3-type, subunit III GOQ09_00930 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase GOQ09_00935 PF00561 alpha/beta hydrolase fold GOQ09_00940 PF08659 KR domain GOQ09_00940 PF02801 Beta-ketoacyl synthase, C-terminal domain GOQ09_00940 PF00550 Phosphopantetheine attachment site GOQ09_00940 PF00698 Acyl transferase domain GOQ09_00940 PF16197 Ketoacyl-synthetase C-terminal extension GOQ09_00940 PF00107 Zinc-binding dehydrogenase GOQ09_00940 PF14765 Polyketide synthase dehydratase GOQ09_00940 PF00109 Beta-ketoacyl synthase, N-terminal domain GOQ09_00940 PF08240 Alcohol dehydrogenase GroES-like domain GOQ09_00945 PF12833 Helix-turn-helix domain GOQ09_00950 PF03466 LysR substrate binding domain GOQ09_00950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_00955 PF00107 Zinc-binding dehydrogenase GOQ09_00955 PF08240 Alcohol dehydrogenase GroES-like domain GOQ09_00960 PF01979 Amidohydrolase family GOQ09_00965 PF00857 Isochorismatase family GOQ09_00985 PF07690 Major Facilitator Superfamily GOQ09_00990 PF02627 Carboxymuconolactone decarboxylase family GOQ09_00995 PF00561 alpha/beta hydrolase fold GOQ09_01045 PF10431 C-terminal, D2-small domain, of ClpB protein GOQ09_01045 PF00004 ATPase family associated with various cellular activities (AAA) GOQ09_01045 PF07724 AAA domain (Cdc48 subfamily) GOQ09_01045 PF17871 AAA lid domain GOQ09_01105 PF00691 OmpA family GOQ09_01105 PF13677 Membrane MotB of proton-channel complex MotA/MotB GOQ09_01120 PF13360 PQQ-like domain GOQ09_01120 PF00069 Protein kinase domain GOQ09_01130 PF13335 Magnesium chelatase, subunit ChlI C-terminal GOQ09_01130 PF01078 Magnesium chelatase, subunit ChlI GOQ09_01140 PF00543 Nitrogen regulatory protein P-II GOQ09_01145 PF00909 Ammonium Transporter Family GOQ09_01150 PF08450 SMP-30/Gluconolactonase/LRE-like region GOQ09_01155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_01155 PF03466 LysR substrate binding domain GOQ09_01160 PF02913 FAD linked oxidases, C-terminal domain GOQ09_01160 PF01565 FAD binding domain GOQ09_01165 PF01565 FAD binding domain GOQ09_01170 PF13183 4Fe-4S dicluster domain GOQ09_01170 PF02754 Cysteine-rich domain GOQ09_01180 PF00255 Glutathione peroxidase GOQ09_01190 PF07690 Major Facilitator Superfamily GOQ09_01195 PF00842 Alanine racemase, C-terminal domain GOQ09_01195 PF01168 Alanine racemase, N-terminal domain GOQ09_01210 PF08546 Ketopantoate reductase PanE/ApbA C terminal GOQ09_01210 PF02558 Ketopantoate reductase PanE/ApbA GOQ09_01215 PF00596 Class II Aldolase and Adducin N-terminal domain GOQ09_01220 PF03401 Tripartite tricarboxylate transporter family receptor GOQ09_01225 PF00920 Dehydratase family GOQ09_01230 PF03328 HpcH/HpaI aldolase/citrate lyase family GOQ09_01235 PF01557 Fumarylacetoacetate (FAA) hydrolase family GOQ09_01255 PF00171 Aldehyde dehydrogenase family GOQ09_01260 PF03401 Tripartite tricarboxylate transporter family receptor GOQ09_01265 PF01557 Fumarylacetoacetate (FAA) hydrolase family GOQ09_01270 PF01557 Fumarylacetoacetate (FAA) hydrolase family GOQ09_01275 PF01047 MarR family GOQ09_01280 PF18073 Rubredoxin metal binding domain GOQ09_01295 PF04381 Putative exonuclease, RdgC GOQ09_01300 PF01063 Amino-transferase class IV GOQ09_01315 PF00512 His Kinase A (phospho-acceptor) domain GOQ09_01315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GOQ09_01315 PF00672 HAMP domain GOQ09_01320 PF00486 Transcriptional regulatory protein, C terminal GOQ09_01320 PF00072 Response regulator receiver domain GOQ09_01325 PF01266 FAD dependent oxidoreductase GOQ09_01335 PF00109 Beta-ketoacyl synthase, N-terminal domain GOQ09_01335 PF02801 Beta-ketoacyl synthase, C-terminal domain GOQ09_01340 PF07690 Major Facilitator Superfamily GOQ09_01350 PF01425 Amidase GOQ09_01355 PF09084 NMT1/THI5 like GOQ09_01360 PF00528 Binding-protein-dependent transport system inner membrane component GOQ09_01365 PF00005 ABC transporter GOQ09_01375 PF02608 ABC transporter substrate-binding protein PnrA-like GOQ09_01390 PF00857 Isochorismatase family GOQ09_01400 PF00857 Isochorismatase family GOQ09_01405 PF07729 FCD domain GOQ09_01405 PF00392 Bacterial regulatory proteins, gntR family GOQ09_01410 PF03372 Endonuclease/Exonuclease/phosphatase family GOQ09_01415 PF00156 Phosphoribosyl transferase domain GOQ09_01425 PF02934 GatB/GatE catalytic domain GOQ09_01425 PF02637 GatB domain GOQ09_01430 PF01425 Amidase GOQ09_01435 PF02686 Glu-tRNAGln amidotransferase C subunit GOQ09_01455 PF00905 Penicillin binding protein transpeptidase domain GOQ09_01455 PF03717 Penicillin-binding Protein dimerisation domain GOQ09_01460 PF01557 Fumarylacetoacetate (FAA) hydrolase family GOQ09_01465 PF04209 homogentisate 1,2-dioxygenase GOQ09_01475 PF01494 FAD binding domain GOQ09_01490 PF02146 Sir2 family GOQ09_01510 PF09383 NIL domain GOQ09_01510 PF00005 ABC transporter GOQ09_01515 PF02405 Permease MlaE GOQ09_01520 PF03466 LysR substrate binding domain GOQ09_01520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_01525 PF05199 GMC oxidoreductase GOQ09_01525 PF00732 GMC oxidoreductase GOQ09_01535 PF01266 FAD dependent oxidoreductase GOQ09_01540 PF04324 BFD-like [2Fe-2S] binding domain GOQ09_01540 PF07992 Pyridine nucleotide-disulphide oxidoreductase GOQ09_01550 PF00528 Binding-protein-dependent transport system inner membrane component GOQ09_01555 PF00528 Binding-protein-dependent transport system inner membrane component GOQ09_01560 PF00005 ABC transporter GOQ09_01560 PF08402 TOBE domain GOQ09_01575 PF00171 Aldehyde dehydrogenase family GOQ09_01590 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GOQ09_01590 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GOQ09_01590 PF00205 Thiamine pyrophosphate enzyme, central domain GOQ09_01600 PF01925 Sulfite exporter TauE/SafE GOQ09_01610 PF01970 Tripartite tricarboxylate transporter TctA family GOQ09_01615 PF07331 Tripartite tricarboxylate transporter TctB family GOQ09_01620 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) GOQ09_01630 PF01253 Translation initiation factor SUI1 GOQ09_01635 PF00270 DEAD/DEAH box helicase GOQ09_01635 PF00271 Helicase conserved C-terminal domain GOQ09_01640 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GOQ09_01640 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GOQ09_01640 PF02770 Acyl-CoA dehydrogenase, middle domain GOQ09_01645 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GOQ09_01645 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GOQ09_01645 PF02770 Acyl-CoA dehydrogenase, middle domain GOQ09_01655 PF00289 Biotin carboxylase, N-terminal domain GOQ09_01655 PF00364 Biotin-requiring enzyme GOQ09_01655 PF02785 Biotin carboxylase C-terminal domain GOQ09_01655 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GOQ09_01660 PF01039 Carboxyl transferase domain GOQ09_01665 PF00563 EAL domain GOQ09_01665 PF03707 Bacterial signalling protein N terminal repeat GOQ09_01665 PF00990 Diguanylate cyclase, GGDEF domain GOQ09_01675 PF00793 DAHP synthetase I family GOQ09_01755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_01755 PF03466 LysR substrate binding domain GOQ09_01765 PF00144 Beta-lactamase GOQ09_01830 PF12833 Helix-turn-helix domain GOQ09_01830 PF06445 GyrI-like small molecule binding domain GOQ09_01840 PF04286 Protein of unknown function (DUF445) GOQ09_01845 PF07687 Peptidase dimerisation domain GOQ09_01845 PF01546 Peptidase family M20/M25/M40 GOQ09_01850 PF03009 Glycerophosphoryl diester phosphodiesterase family GOQ09_01855 PF07687 Peptidase dimerisation domain GOQ09_01855 PF01546 Peptidase family M20/M25/M40 GOQ09_01870 PF01568 Molydopterin dinucleotide binding domain GOQ09_01870 PF00384 Molybdopterin oxidoreductase GOQ09_01870 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GOQ09_01890 PF02782 FGGY family of carbohydrate kinases, C-terminal domain GOQ09_01890 PF00370 FGGY family of carbohydrate kinases, N-terminal domain GOQ09_01895 PF08240 Alcohol dehydrogenase GroES-like domain GOQ09_01895 PF00107 Zinc-binding dehydrogenase GOQ09_01900 PF02653 Branched-chain amino acid transport system / permease component GOQ09_01905 PF00005 ABC transporter GOQ09_01910 PF13407 Periplasmic binding protein domain GOQ09_01915 PF12833 Helix-turn-helix domain GOQ09_01920 PF02515 CoA-transferase family III GOQ09_01950 PF03466 LysR substrate binding domain GOQ09_01950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_01955 PF07883 Cupin domain GOQ09_01960 PF01557 Fumarylacetoacetate (FAA) hydrolase family GOQ09_01965 PF01494 FAD binding domain GOQ09_01970 PF03401 Tripartite tricarboxylate transporter family receptor GOQ09_01975 PF03401 Tripartite tricarboxylate transporter family receptor GOQ09_01980 PF04324 BFD-like [2Fe-2S] binding domain GOQ09_01980 PF07992 Pyridine nucleotide-disulphide oxidoreductase GOQ09_01995 PF01740 STAS domain GOQ09_01995 PF00916 Sulfate permease family GOQ09_02000 PF00005 ABC transporter GOQ09_02005 PF00005 ABC transporter GOQ09_02005 PF12399 Branched-chain amino acid ATP-binding cassette transporter GOQ09_02010 PF02653 Branched-chain amino acid transport system / permease component GOQ09_02010 PF11862 Domain of unknown function (DUF3382) GOQ09_02015 PF02653 Branched-chain amino acid transport system / permease component GOQ09_02025 PF00137 ATP synthase subunit C GOQ09_02035 PF01791 DeoC/LacD family aldolase GOQ09_02040 PF00248 Aldo/keto reductase family GOQ09_02045 PF02653 Branched-chain amino acid transport system / permease component GOQ09_02050 PF00005 ABC transporter GOQ09_02065 PF16901 C-terminal domain of alpha-glycerophosphate oxidase GOQ09_02065 PF01266 FAD dependent oxidoreductase GOQ09_02090 PF17760 UvrA interaction domain GOQ09_02090 PF17755 UvrA DNA-binding domain GOQ09_02095 PF00654 Voltage gated chloride channel GOQ09_02100 PF00436 Single-strand binding protein family GOQ09_02130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GOQ09_02130 PF07730 Histidine kinase GOQ09_02135 PF01709 Transcriptional regulator GOQ09_02150 PF00296 Luciferase-like monooxygenase GOQ09_02170 PF00072 Response regulator receiver domain GOQ09_02170 PF00486 Transcriptional regulatory protein, C terminal GOQ09_02175 PF01262 Alanine dehydrogenase/PNT, C-terminal domain GOQ09_02175 PF05222 Alanine dehydrogenase/PNT, N-terminal domain GOQ09_02180 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch GOQ09_02185 PF02233 NAD(P) transhydrogenase beta subunit GOQ09_02190 PF00501 AMP-binding enzyme GOQ09_02190 PF13193 AMP-binding enzyme C-terminal domain GOQ09_02195 PF00528 Binding-protein-dependent transport system inner membrane component GOQ09_02200 PF12911 N-terminal TM domain of oligopeptide transport permease C GOQ09_02200 PF00528 Binding-protein-dependent transport system inner membrane component GOQ09_02205 PF00005 ABC transporter GOQ09_02205 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GOQ09_02210 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GOQ09_02210 PF00005 ABC transporter GOQ09_02215 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GOQ09_02220 PF01048 Phosphorylase superfamily GOQ09_02225 PF01544 CorA-like Mg2+ transporter protein GOQ09_02230 PF00580 UvrD/REP helicase N-terminal domain GOQ09_02230 PF13361 UvrD-like helicase C-terminal domain GOQ09_02235 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein GOQ09_02240 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GOQ09_02245 PF02603 HPr Serine kinase N terminus GOQ09_02245 PF07475 HPr Serine kinase C-terminal domain GOQ09_02250 PF01475 Ferric uptake regulator family GOQ09_02255 PF04355 SmpA / OmlA family GOQ09_02265 PF01618 MotA/TolQ/ExbB proton channel family GOQ09_02270 PF02472 Biopolymer transport protein ExbD/TolR GOQ09_02275 PF00343 Carbohydrate phosphorylase GOQ09_02280 PF08323 Starch synthase catalytic domain GOQ09_02280 PF00534 Glycosyl transferases group 1 GOQ09_02285 PF00483 Nucleotidyl transferase GOQ09_02290 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) GOQ09_02290 PF00128 Alpha amylase, catalytic domain GOQ09_02290 PF18390 Glycogen debranching enzyme C-terminal domain GOQ09_02295 PF02806 Alpha amylase, C-terminal all-beta domain GOQ09_02295 PF00128 Alpha amylase, catalytic domain GOQ09_02295 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) GOQ09_02300 PF00128 Alpha amylase, catalytic domain GOQ09_02305 PF13454 FAD-NAD(P)-binding GOQ09_02325 PF03401 Tripartite tricarboxylate transporter family receptor GOQ09_02330 PF13603 Leucyl-tRNA synthetase, Domain 2 GOQ09_02330 PF09334 tRNA synthetases class I (M) GOQ09_02330 PF08264 Anticodon-binding domain of tRNA GOQ09_02330 PF00133 tRNA synthetases class I (I, L, M and V) GOQ09_02345 PF00171 Aldehyde dehydrogenase family GOQ09_02355 PF02705 K+ potassium transporter GOQ09_02370 PF03594 Benzoate membrane transport protein GOQ09_02375 PF02951 Prokaryotic glutathione synthetase, N-terminal domain GOQ09_02375 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain GOQ09_02385 PF07715 TonB-dependent Receptor Plug Domain GOQ09_02385 PF00593 TonB dependent receptor GOQ09_02390 PF13230 Glutamine amidotransferases class-II GOQ09_02400 PF07690 Major Facilitator Superfamily GOQ09_02405 PF10005 zinc-ribbon domain GOQ09_02405 PF15887 Putative zinc-binding metallo-peptidase GOQ09_02415 PF00365 Phosphofructokinase GOQ09_02425 PF00378 Enoyl-CoA hydratase/isomerase GOQ09_02430 PF02803 Thiolase, C-terminal domain GOQ09_02430 PF00108 Thiolase, N-terminal domain GOQ09_02440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_02440 PF03466 LysR substrate binding domain GOQ09_02445 PF02469 Fasciclin domain GOQ09_02465 PF01274 Malate synthase GOQ09_02475 PF00682 HMGL-like GOQ09_02480 PF02515 CoA-transferase family III GOQ09_02485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_02485 PF03466 LysR substrate binding domain GOQ09_02505 PF00750 tRNA synthetases class I (R) GOQ09_02505 PF05746 DALR anticodon binding domain GOQ09_02505 PF03485 Arginyl tRNA synthetase N terminal domain GOQ09_02515 PF01323 DSBA-like thioredoxin domain GOQ09_02515 PF00085 Thioredoxin GOQ09_02520 PF03968 OstA-like protein GOQ09_02525 PF00005 ABC transporter GOQ09_02530 PF04963 Sigma-54 factor, core binding domain GOQ09_02530 PF04552 Sigma-54, DNA binding domain GOQ09_02530 PF00309 Sigma-54 factor, Activator interacting domain (AID) GOQ09_02540 PF02926 THUMP domain GOQ09_02540 PF01170 Putative RNA methylase family UPF0020 GOQ09_02560 PF01645 Conserved region in glutamate synthase GOQ09_02565 PF07516 SecA Wing and Scaffold domain GOQ09_02565 PF01043 SecA preprotein cross-linking domain GOQ09_02565 PF07517 SecA DEAD-like domain GOQ09_02565 PF02810 SEC-C motif GOQ09_02580 PF02464 Competence-damaged protein GOQ09_02585 PF04608 Phosphatidylglycerophosphatase A GOQ09_02590 PF07690 Major Facilitator Superfamily GOQ09_02595 PF01494 FAD binding domain GOQ09_02600 PF03401 Tripartite tricarboxylate transporter family receptor GOQ09_02605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_02605 PF03466 LysR substrate binding domain GOQ09_02615 PF02769 AIR synthase related protein, C-terminal domain GOQ09_02615 PF00586 AIR synthase related protein, N-terminal domain GOQ09_02625 PF00857 Isochorismatase family GOQ09_02630 PF01965 DJ-1/PfpI family GOQ09_02630 PF12833 Helix-turn-helix domain GOQ09_02635 PF04107 Glutamate-cysteine ligase family 2(GCS2) GOQ09_02645 PF04379 ApaG domain GOQ09_02650 PF00834 Ribulose-phosphate 3 epimerase family GOQ09_02665 PF02735 Ku70/Ku80 beta-barrel domain GOQ09_02670 PF13298 DNA polymerase Ligase (LigD) GOQ09_02670 PF04679 ATP dependent DNA ligase C terminal region GOQ09_02670 PF01068 ATP dependent DNA ligase domain GOQ09_02680 PF06628 Catalase-related immune-responsive GOQ09_02680 PF00199 Catalase GOQ09_02680 PF18011 C-terminal domain found in long catalases GOQ09_02705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GOQ09_02705 PF00512 His Kinase A (phospho-acceptor) domain GOQ09_02715 PF00672 HAMP domain GOQ09_02715 PF01627 Hpt domain GOQ09_02715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GOQ09_02715 PF00512 His Kinase A (phospho-acceptor) domain GOQ09_02715 PF00072 Response regulator receiver domain GOQ09_02735 PF13677 Membrane MotB of proton-channel complex MotA/MotB GOQ09_02735 PF00691 OmpA family GOQ09_02750 PF00069 Protein kinase domain GOQ09_02800 PF00004 ATPase family associated with various cellular activities (AAA) GOQ09_02800 PF17871 AAA lid domain GOQ09_02800 PF07724 AAA domain (Cdc48 subfamily) GOQ09_02800 PF10431 C-terminal, D2-small domain, of ClpB protein GOQ09_02805 PF04717 Type VI secretion system, phage-baseplate injector GOQ09_02830 PF04717 Type VI secretion system, phage-baseplate injector GOQ09_02920 PF00196 Bacterial regulatory proteins, luxR family GOQ09_02920 PF00072 Response regulator receiver domain GOQ09_02960 PF13419 Haloacid dehalogenase-like hydrolase GOQ09_02970 PF04715 Anthranilate synthase component I, N terminal region GOQ09_02970 PF00425 chorismate binding enzyme GOQ09_02980 PF00117 Glutamine amidotransferase class-I GOQ09_02985 PF01212 Beta-eliminating lyase GOQ09_02990 PF01810 LysE type translocator GOQ09_02995 PF02885 Glycosyl transferase family, helical bundle domain GOQ09_02995 PF00591 Glycosyl transferase family, a/b domain GOQ09_03000 PF00218 Indole-3-glycerol phosphate synthase GOQ09_03005 PF03167 Uracil DNA glycosylase superfamily GOQ09_03025 PF00009 Elongation factor Tu GTP binding domain GOQ09_03025 PF03144 Elongation factor Tu domain 2 GOQ09_03025 PF03143 Elongation factor Tu C-terminal domain GOQ09_03040 PF02357 Transcription termination factor nusG GOQ09_03040 PF00467 KOW motif GOQ09_03045 PF03946 Ribosomal protein L11, N-terminal domain GOQ09_03045 PF00298 Ribosomal protein L11, RNA binding domain GOQ09_03050 PF00687 Ribosomal protein L1p/L10e family GOQ09_03055 PF00466 Ribosomal protein L10 GOQ09_03060 PF16320 Ribosomal protein L7/L12 dimerisation domain GOQ09_03060 PF00542 Ribosomal protein L7/L12 C-terminal domain GOQ09_03065 PF04560 RNA polymerase Rpb2, domain 7 GOQ09_03065 PF00562 RNA polymerase Rpb2, domain 6 GOQ09_03065 PF10385 RNA polymerase beta subunit external 1 domain GOQ09_03065 PF04563 RNA polymerase beta subunit GOQ09_03065 PF04561 RNA polymerase Rpb2, domain 2 GOQ09_03065 PF04565 RNA polymerase Rpb2, domain 3 GOQ09_03070 PF04998 RNA polymerase Rpb1, domain 5 GOQ09_03070 PF05000 RNA polymerase Rpb1, domain 4 GOQ09_03070 PF04983 RNA polymerase Rpb1, domain 3 GOQ09_03070 PF04997 RNA polymerase Rpb1, domain 1 GOQ09_03070 PF00623 RNA polymerase Rpb1, domain 2 GOQ09_03080 PF01189 16S rRNA methyltransferase RsmB/F GOQ09_03080 PF01029 NusB family GOQ09_03090 PF00672 HAMP domain GOQ09_03090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GOQ09_03090 PF00989 PAS fold GOQ09_03090 PF00512 His Kinase A (phospho-acceptor) domain GOQ09_03095 PF02954 Bacterial regulatory protein, Fis family GOQ09_03095 PF00158 Sigma-54 interaction domain GOQ09_03095 PF00072 Response regulator receiver domain GOQ09_03110 PF01042 Endoribonuclease L-PSP GOQ09_03120 PF12802 MarR family GOQ09_03125 PF02321 Outer membrane efflux protein GOQ09_03130 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GOQ09_03135 PF00873 AcrB/AcrD/AcrF family GOQ09_03140 PF04333 MlaA lipoprotein GOQ09_03150 PF07715 TonB-dependent Receptor Plug Domain GOQ09_03150 PF00593 TonB dependent receptor GOQ09_03160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GOQ09_03160 PF00512 His Kinase A (phospho-acceptor) domain GOQ09_03160 PF16767 Sensor domain of alginate biosynthesis sensor protein KinB GOQ09_03160 PF08448 PAS fold GOQ09_03160 PF00672 HAMP domain GOQ09_03165 PF00072 Response regulator receiver domain GOQ09_03165 PF00486 Transcriptional regulatory protein, C terminal GOQ09_03175 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GOQ09_03175 PF00672 HAMP domain GOQ09_03175 PF02203 Tar ligand binding domain homologue GOQ09_03180 PF01738 Dienelactone hydrolase family GOQ09_03180 PF00156 Phosphoribosyl transferase domain GOQ09_03200 PF08241 Methyltransferase domain GOQ09_03210 PF01258 Prokaryotic dksA/traR C4-type zinc finger GOQ09_03220 PF00510 Cytochrome c oxidase subunit III GOQ09_03225 PF00115 Cytochrome C and Quinol oxidase polypeptide I GOQ09_03230 PF02790 Cytochrome C oxidase subunit II, transmembrane domain GOQ09_03230 PF00116 Cytochrome C oxidase subunit II, periplasmic domain GOQ09_03240 PF00497 Bacterial extracellular solute-binding proteins, family 3 GOQ09_03245 PF13360 PQQ-like domain GOQ09_03255 PF00118 TCP-1/cpn60 chaperonin family GOQ09_03260 PF00166 Chaperonin 10 Kd subunit GOQ09_03270 PF13439 Glycosyltransferase Family 4 GOQ09_03270 PF00534 Glycosyl transferases group 1 GOQ09_03295 PF01654 Cytochrome bd terminal oxidase subunit I GOQ09_03300 PF02322 Cytochrome bd terminal oxidase subunit II GOQ09_03315 PF00194 Eukaryotic-type carbonic anhydrase GOQ09_03320 PF01425 Amidase GOQ09_03325 PF03401 Tripartite tricarboxylate transporter family receptor GOQ09_03330 PF03466 LysR substrate binding domain GOQ09_03330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_03335 PF00216 Bacterial DNA-binding protein GOQ09_03340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_03340 PF03466 LysR substrate binding domain GOQ09_03350 PF03707 Bacterial signalling protein N terminal repeat GOQ09_03350 PF00990 Diguanylate cyclase, GGDEF domain GOQ09_03350 PF00563 EAL domain GOQ09_03355 PF08448 PAS fold GOQ09_03355 PF00563 EAL domain GOQ09_03355 PF13426 PAS domain GOQ09_03355 PF00990 Diguanylate cyclase, GGDEF domain GOQ09_03355 PF08447 PAS fold GOQ09_03355 PF05231 MASE1 GOQ09_03360 PF02702 Osmosensitive K+ channel His kinase sensor domain GOQ09_03360 PF13493 Domain of unknown function (DUF4118) GOQ09_03360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GOQ09_03360 PF00512 His Kinase A (phospho-acceptor) domain GOQ09_03360 PF13492 GAF domain GOQ09_03365 PF02540 NAD synthase GOQ09_03370 PF02253 Phospholipase A1 GOQ09_03380 PF13361 UvrD-like helicase C-terminal domain GOQ09_03380 PF00580 UvrD/REP helicase N-terminal domain GOQ09_03385 PF03547 Membrane transport protein GOQ09_03400 PF18074 Primosomal protein N C-terminal domain GOQ09_03400 PF17764 3′ DNA-binding domain (3′BD) GOQ09_03400 PF00270 DEAD/DEAH box helicase GOQ09_03400 PF18319 PriA DNA helicase Cys-rich region (CRR) domain GOQ09_03400 PF00271 Helicase conserved C-terminal domain GOQ09_03405 PF01208 Uroporphyrinogen decarboxylase (URO-D) GOQ09_03410 PF07690 Major Facilitator Superfamily GOQ09_03415 PF00578 AhpC/TSA family GOQ09_03420 PF11412 Disulphide bond corrector protein DsbC GOQ09_03420 PF02683 Cytochrome C biogenesis protein transmembrane region GOQ09_03420 PF13098 Thioredoxin-like domain GOQ09_03425 PF01411 tRNA synthetases class II (A) GOQ09_03425 PF02272 DHHA1 domain GOQ09_03425 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain GOQ09_03430 PF07995 Glucose / Sorbosone dehydrogenase GOQ09_03440 PF08240 Alcohol dehydrogenase GroES-like domain GOQ09_03440 PF00107 Zinc-binding dehydrogenase GOQ09_03445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_03445 PF03466 LysR substrate binding domain GOQ09_03455 PF02633 Creatinine amidohydrolase GOQ09_03460 PF00291 Pyridoxal-phosphate dependent enzyme GOQ09_03465 PF01810 LysE type translocator GOQ09_03475 PF02567 Phenazine biosynthesis-like protein GOQ09_03480 PF00043 Glutathione S-transferase, C-terminal domain GOQ09_03480 PF13417 Glutathione S-transferase, N-terminal domain GOQ09_03485 PF01810 LysE type translocator GOQ09_03495 PF00155 Aminotransferase class I and II GOQ09_03500 PF00892 EamA-like transporter family GOQ09_03525 PF01266 FAD dependent oxidoreductase GOQ09_03530 PF16363 GDP-mannose 4,6 dehydratase GOQ09_03535 PF04321 RmlD substrate binding domain GOQ09_03540 PF00483 Nucleotidyl transferase GOQ09_03545 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase GOQ09_03565 PF05523 WxcM-like, C-terminal GOQ09_03570 PF00535 Glycosyl transferase family 2 GOQ09_03575 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family GOQ09_03595 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family GOQ09_03600 PF00132 Bacterial transferase hexapeptide (six repeats) GOQ09_03610 PF16363 GDP-mannose 4,6 dehydratase GOQ09_03615 PF00534 Glycosyl transferases group 1 GOQ09_03615 PF13439 Glycosyltransferase Family 4 GOQ09_03620 PF00005 ABC transporter GOQ09_03625 PF01061 ABC-2 type transporter GOQ09_03630 PF01050 Mannose-6-phosphate isomerase GOQ09_03630 PF00483 Nucleotidyl transferase GOQ09_03635 PF00535 Glycosyl transferase family 2 GOQ09_03640 PF00535 Glycosyl transferase family 2 GOQ09_03650 PF00953 Glycosyl transferase family 4 GOQ09_03655 PF00696 Amino acid kinase family GOQ09_03660 PF16363 GDP-mannose 4,6 dehydratase GOQ09_03665 PF00440 Bacterial regulatory proteins, tetR family GOQ09_03670 PF06628 Catalase-related immune-responsive GOQ09_03670 PF00199 Catalase GOQ09_03685 PF00892 EamA-like transporter family GOQ09_03690 PF02615 Malate/L-lactate dehydrogenase GOQ09_03695 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus GOQ09_03695 PF08666 SAF domain GOQ09_03700 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component GOQ09_03710 PF03480 Bacterial extracellular solute-binding protein, family 7 GOQ09_03715 PF07729 FCD domain GOQ09_03715 PF00392 Bacterial regulatory proteins, gntR family GOQ09_03730 PF01557 Fumarylacetoacetate (FAA) hydrolase family GOQ09_03735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_03735 PF03466 LysR substrate binding domain GOQ09_03740 PF00106 short chain dehydrogenase GOQ09_03750 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GOQ09_03750 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GOQ09_03750 PF12806 Acetyl-CoA dehydrogenase C-terminal like GOQ09_03750 PF02770 Acyl-CoA dehydrogenase, middle domain GOQ09_03760 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GOQ09_03760 PF00378 Enoyl-CoA hydratase/isomerase GOQ09_03760 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain GOQ09_03765 PF04480 Protein of unknown function (DUF559) GOQ09_03770 PF02803 Thiolase, C-terminal domain GOQ09_03770 PF00108 Thiolase, N-terminal domain GOQ09_03785 PF00106 short chain dehydrogenase GOQ09_03790 PF01323 DSBA-like thioredoxin domain GOQ09_03795 PF00378 Enoyl-CoA hydratase/isomerase GOQ09_03800 PF03061 Thioesterase superfamily GOQ09_03805 PF00005 ABC transporter GOQ09_03805 PF00664 ABC transporter transmembrane region GOQ09_03810 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GOQ09_03810 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GOQ09_03815 PF01425 Amidase GOQ09_03820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_03820 PF03466 LysR substrate binding domain GOQ09_03825 PF00206 Lyase GOQ09_03825 PF10415 Fumarase C C-terminus GOQ09_03830 PF00497 Bacterial extracellular solute-binding proteins, family 3 GOQ09_03835 PF00528 Binding-protein-dependent transport system inner membrane component GOQ09_03840 PF00528 Binding-protein-dependent transport system inner membrane component GOQ09_03845 PF00005 ABC transporter GOQ09_03850 PF01156 Inosine-uridine preferring nucleoside hydrolase GOQ09_03855 PF03480 Bacterial extracellular solute-binding protein, family 7 GOQ09_03860 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component GOQ09_03865 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component GOQ09_03870 PF03401 Tripartite tricarboxylate transporter family receptor GOQ09_03875 PF00501 AMP-binding enzyme GOQ09_03875 PF13193 AMP-binding enzyme C-terminal domain GOQ09_03880 PF03401 Tripartite tricarboxylate transporter family receptor GOQ09_03885 PF02515 CoA-transferase family III GOQ09_03890 PF00378 Enoyl-CoA hydratase/isomerase GOQ09_03895 PF02770 Acyl-CoA dehydrogenase, middle domain GOQ09_03895 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GOQ09_03895 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GOQ09_03900 PF02770 Acyl-CoA dehydrogenase, middle domain GOQ09_03900 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GOQ09_03900 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GOQ09_03905 PF00378 Enoyl-CoA hydratase/isomerase GOQ09_03905 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GOQ09_03905 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain GOQ09_03910 PF03466 LysR substrate binding domain GOQ09_03910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_03925 PF03167 Uracil DNA glycosylase superfamily GOQ09_03930 PF04115 Ureidoglycolate lyase GOQ09_03935 PF01425 Amidase GOQ09_03940 PF00005 ABC transporter GOQ09_03940 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GOQ09_03945 PF00005 ABC transporter GOQ09_03945 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GOQ09_03950 PF00528 Binding-protein-dependent transport system inner membrane component GOQ09_03950 PF12911 N-terminal TM domain of oligopeptide transport permease C GOQ09_03955 PF00528 Binding-protein-dependent transport system inner membrane component GOQ09_03960 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GOQ09_03965 PF01979 Amidohydrolase family GOQ09_03980 PF01435 Peptidase family M48 GOQ09_03995 PF04352 ProQ/FINO family GOQ09_03995 PF17516 ProQ C-terminal domain GOQ09_04000 PF01613 Flavin reductase like domain GOQ09_04010 PF00291 Pyridoxal-phosphate dependent enzyme GOQ09_04025 PF01479 S4 domain GOQ09_04025 PF00849 RNA pseudouridylate synthase GOQ09_04030 PF16123 Hydroxyacylglutathione hydrolase C-terminus GOQ09_04030 PF00753 Metallo-beta-lactamase superfamily GOQ09_04035 PF03401 Tripartite tricarboxylate transporter family receptor GOQ09_04045 PF02634 FdhD/NarQ family GOQ09_04050 PF01568 Molydopterin dinucleotide binding domain GOQ09_04050 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region GOQ09_04050 PF00384 Molybdopterin oxidoreductase GOQ09_04050 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GOQ09_04050 PF00037 4Fe-4S binding domain GOQ09_04055 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region GOQ09_04055 PF00037 4Fe-4S binding domain GOQ09_04055 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit GOQ09_04080 PF05163 DinB family GOQ09_04085 PF01909 Nucleotidyltransferase domain GOQ09_04085 PF13427 Domain of unknown function (DUF4111) GOQ09_04100 PF00561 alpha/beta hydrolase fold GOQ09_04130 PF05506 Domain of unknown function (DUF756) GOQ09_04130 PF04185 Phosphoesterase family GOQ09_04140 PF00248 Aldo/keto reductase family GOQ09_04145 PF07690 Major Facilitator Superfamily GOQ09_04155 PF07883 Cupin domain GOQ09_04155 PF12833 Helix-turn-helix domain GOQ09_04180 PF03449 Transcription elongation factor, N-terminal GOQ09_04180 PF01272 Transcription elongation factor, GreA/GreB, C-term GOQ09_04210 PF04542 Sigma-70 region 2 GOQ09_04210 PF12680 SnoaL-like domain GOQ09_04210 PF08281 Sigma-70, region 4 GOQ09_04220 PF00144 Beta-lactamase GOQ09_04230 PF01593 Flavin containing amine oxidoreductase GOQ09_04240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_04240 PF03466 LysR substrate binding domain GOQ09_04255 PF01678 Diaminopimelate epimerase GOQ09_04275 PF10672 S-adenosylmethionine-dependent methyltransferase GOQ09_04275 PF17785 PUA-like domain GOQ09_04280 PF07683 Cobalamin synthesis protein cobW C-terminal domain GOQ09_04280 PF02492 CobW/HypB/UreG, nucleotide-binding domain GOQ09_04295 PF01258 Prokaryotic dksA/traR C4-type zinc finger GOQ09_04305 PF00227 Proteasome subunit GOQ09_04310 PF07724 AAA domain (Cdc48 subfamily) GOQ09_04310 PF00004 ATPase family associated with various cellular activities (AAA) GOQ09_04315 PF02381 MraZ protein, putative antitoxin-like GOQ09_04320 PF01795 MraW methylase family GOQ09_04325 PF04999 Cell division protein FtsL GOQ09_04330 PF03717 Penicillin-binding Protein dimerisation domain GOQ09_04330 PF00905 Penicillin binding protein transpeptidase domain GOQ09_04335 PF02875 Mur ligase family, glutamate ligase domain GOQ09_04335 PF08245 Mur ligase middle domain GOQ09_04340 PF02875 Mur ligase family, glutamate ligase domain GOQ09_04340 PF08245 Mur ligase middle domain GOQ09_04340 PF01225 Mur ligase family, catalytic domain GOQ09_04345 PF00953 Glycosyl transferase family 4 GOQ09_04345 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 GOQ09_04350 PF08245 Mur ligase middle domain GOQ09_04350 PF02875 Mur ligase family, glutamate ligase domain GOQ09_04355 PF01098 Cell cycle protein GOQ09_04360 PF03033 Glycosyltransferase family 28 N-terminal domain GOQ09_04360 PF04101 Glycosyltransferase family 28 C-terminal domain GOQ09_04365 PF08245 Mur ligase middle domain GOQ09_04365 PF02875 Mur ligase family, glutamate ligase domain GOQ09_04365 PF01225 Mur ligase family, catalytic domain GOQ09_04370 PF07478 D-ala D-ala ligase C-terminus GOQ09_04370 PF01820 D-ala D-ala ligase N-terminus GOQ09_04375 PF03799 Cell division protein FtsQ GOQ09_04375 PF08478 POTRA domain, FtsQ-type GOQ09_04380 PF02491 SHS2 domain inserted in FTSA GOQ09_04385 PF12327 FtsZ family, C-terminal domain GOQ09_04385 PF00091 Tubulin/FtsZ family, GTPase domain GOQ09_04390 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase GOQ09_04395 PF02075 Crossover junction endodeoxyribonuclease RuvC GOQ09_04415 PF00912 Transglycosylase GOQ09_04420 PF18317 Shikimate 5'-dehydrogenase C-terminal domain GOQ09_04420 PF08501 Shikimate dehydrogenase substrate binding domain GOQ09_04420 PF01488 Shikimate / quinate 5-dehydrogenase GOQ09_04430 PF17876 Cold shock domain GOQ09_04430 PF00575 S1 RNA binding domain GOQ09_04430 PF08206 Ribonuclease B OB domain GOQ09_04430 PF00773 RNB domain GOQ09_04435 PF05728 Uncharacterised protein family (UPF0227) GOQ09_04440 PF00072 Response regulator receiver domain GOQ09_04440 PF00196 Bacterial regulatory proteins, luxR family GOQ09_04450 PF01098 Cell cycle protein GOQ09_04455 PF01523 Putative modulator of DNA gyrase GOQ09_04465 PF00793 DAHP synthetase I family GOQ09_04475 PF08245 Mur ligase middle domain GOQ09_04475 PF02875 Mur ligase family, glutamate ligase domain GOQ09_04475 PF01225 Mur ligase family, catalytic domain GOQ09_04485 PF08534 Redoxin GOQ09_04490 PF00364 Biotin-requiring enzyme GOQ09_04495 PF02785 Biotin carboxylase C-terminal domain GOQ09_04495 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GOQ09_04495 PF00289 Biotin carboxylase, N-terminal domain GOQ09_04510 PF00294 pfkB family carbohydrate kinase GOQ09_04520 PF00268 Ribonucleotide reductase, small chain GOQ09_04525 PF03477 ATP cone domain GOQ09_04525 PF02867 Ribonucleotide reductase, barrel domain GOQ09_04525 PF00317 Ribonucleotide reductase, all-alpha domain GOQ09_04530 PF01510 N-acetylmuramoyl-L-alanine amidase GOQ09_04535 PF02954 Bacterial regulatory protein, Fis family GOQ09_04535 PF00158 Sigma-54 interaction domain GOQ09_04535 PF00072 Response regulator receiver domain GOQ09_04540 PF00512 His Kinase A (phospho-acceptor) domain GOQ09_04540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GOQ09_04555 PF02978 Signal peptide binding domain GOQ09_04555 PF02881 SRP54-type protein, helical bundle domain GOQ09_04555 PF00448 SRP54-type protein, GTPase domain GOQ09_04570 PF00158 Sigma-54 interaction domain GOQ09_04570 PF00072 Response regulator receiver domain GOQ09_04580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GOQ09_04580 PF00512 His Kinase A (phospho-acceptor) domain GOQ09_04585 PF00919 Uncharacterized protein family UPF0004 GOQ09_04585 PF01938 TRAM domain GOQ09_04585 PF04055 Radical SAM superfamily GOQ09_04595 PF13533 Biotin-lipoyl like GOQ09_04600 PF00873 AcrB/AcrD/AcrF family GOQ09_04605 PF00300 Histidine phosphatase superfamily (branch 1) GOQ09_04615 PF01171 PP-loop family GOQ09_04635 PF02668 Taurine catabolism dioxygenase TauD, TfdA family GOQ09_04640 PF17263 Family of unknown function (DUF5329) GOQ09_04645 PF00459 Inositol monophosphatase family GOQ09_04655 PF00480 ROK family GOQ09_04670 PF00982 Glycosyltransferase family 20 GOQ09_04675 PF00723 Glycosyl hydrolases family 15 GOQ09_04680 PF02358 Trehalose-phosphatase GOQ09_04685 PF12627 Probable RNA and SrmB- binding site of polymerase A GOQ09_04685 PF01743 Poly A polymerase head domain GOQ09_04685 PF01966 HD domain GOQ09_04695 PF14497 Glutathione S-transferase, C-terminal domain GOQ09_04695 PF02798 Glutathione S-transferase, N-terminal domain GOQ09_04700 PF02308 MgtC family GOQ09_04705 PF14718 Soluble lytic murein transglycosylase L domain GOQ09_04705 PF01464 Transglycosylase SLT domain GOQ09_04710 PF01812 5-formyltetrahydrofolate cyclo-ligase family GOQ09_04715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_04715 PF03466 LysR substrate binding domain GOQ09_04730 PF00027 Cyclic nucleotide-binding domain GOQ09_04730 PF13545 Crp-like helix-turn-helix domain GOQ09_04740 PF00132 Bacterial transferase hexapeptide (six repeats) GOQ09_04740 PF12804 MobA-like NTP transferase domain GOQ09_04745 PF01037 Lrp/AsnC ligand binding domain GOQ09_04750 PF01380 SIS domain GOQ09_04755 PF00933 Glycosyl hydrolase family 3 N terminal domain GOQ09_04755 PF14310 Fibronectin type III-like domain GOQ09_04755 PF01915 Glycosyl hydrolase family 3 C-terminal domain GOQ09_04770 PF00005 ABC transporter GOQ09_04770 PF06472 ABC transporter transmembrane region 2 GOQ09_04780 PF00128 Alpha amylase, catalytic domain GOQ09_04785 PF00583 Acetyltransferase (GNAT) family GOQ09_04845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_04845 PF03466 LysR substrate binding domain GOQ09_04850 PF17954 Quercetinase C-terminal cupin domain GOQ09_04850 PF02678 Pirin GOQ09_04855 PF00857 Isochorismatase family GOQ09_04865 PF07969 Amidohydrolase family GOQ09_04875 PF07690 Major Facilitator Superfamily GOQ09_04880 PF00561 alpha/beta hydrolase fold GOQ09_04900 PF00155 Aminotransferase class I and II GOQ09_04900 PF00392 Bacterial regulatory proteins, gntR family GOQ09_04905 PF00155 Aminotransferase class I and II GOQ09_04910 PF17200 Single Cache domain 2 GOQ09_04910 PF07730 Histidine kinase GOQ09_04915 PF07690 Major Facilitator Superfamily GOQ09_04920 PF00196 Bacterial regulatory proteins, luxR family GOQ09_04920 PF00072 Response regulator receiver domain GOQ09_04930 PF07519 Tannase and feruloyl esterase GOQ09_04935 PF13545 Crp-like helix-turn-helix domain GOQ09_04935 PF00027 Cyclic nucleotide-binding domain GOQ09_04980 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase GOQ09_04980 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain GOQ09_04985 PF00941 FAD binding domain in molybdopterin dehydrogenase GOQ09_04985 PF03450 CO dehydrogenase flavoprotein C-terminal domain GOQ09_04990 PF01799 [2Fe-2S] binding domain GOQ09_04990 PF10518 TAT (twin-arginine translocation) pathway signal sequence GOQ09_04990 PF00111 2Fe-2S iron-sulfur cluster binding domain GOQ09_04995 PF12833 Helix-turn-helix domain GOQ09_04995 PF06719 AraC-type transcriptional regulator N-terminus GOQ09_05000 PF00561 alpha/beta hydrolase fold GOQ09_05010 PF03466 LysR substrate binding domain GOQ09_05010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_05015 PF02515 CoA-transferase family III GOQ09_05020 PF00775 Dioxygenase GOQ09_05020 PF04444 Catechol dioxygenase N terminus GOQ09_05030 PF03401 Tripartite tricarboxylate transporter family receptor GOQ09_05035 PF03401 Tripartite tricarboxylate transporter family receptor GOQ09_05040 PF00392 Bacterial regulatory proteins, gntR family GOQ09_05040 PF00155 Aminotransferase class I and II GOQ09_05045 PF00202 Aminotransferase class-III GOQ09_05050 PF08402 TOBE domain GOQ09_05050 PF00005 ABC transporter GOQ09_05060 PF00528 Binding-protein-dependent transport system inner membrane component GOQ09_05070 PF00491 Arginase family GOQ09_05075 PF00171 Aldehyde dehydrogenase family GOQ09_05080 PF01613 Flavin reductase like domain GOQ09_05085 PF08028 Acyl-CoA dehydrogenase, C-terminal domain GOQ09_05085 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GOQ09_05095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_05095 PF03466 LysR substrate binding domain GOQ09_05100 PF00465 Iron-containing alcohol dehydrogenase GOQ09_05105 PF04444 Catechol dioxygenase N terminus GOQ09_05105 PF00775 Dioxygenase GOQ09_05115 PF07690 Major Facilitator Superfamily GOQ09_05120 PF01435 Peptidase family M48 GOQ09_05135 PF04070 Domain of unknown function (DUF378) GOQ09_05140 PF00561 alpha/beta hydrolase fold GOQ09_05165 PF07676 WD40-like Beta Propeller Repeat GOQ09_05165 PF00326 Prolyl oligopeptidase family GOQ09_05175 PF05067 Manganese containing catalase GOQ09_05180 PF13192 Thioredoxin domain GOQ09_05180 PF07992 Pyridine nucleotide-disulphide oxidoreductase GOQ09_05185 PF13823 Alcohol dehydrogenase GroES-associated GOQ09_05185 PF00107 Zinc-binding dehydrogenase GOQ09_05185 PF08240 Alcohol dehydrogenase GroES-like domain GOQ09_05195 PF00664 ABC transporter transmembrane region GOQ09_05195 PF00005 ABC transporter GOQ09_05205 PF00271 Helicase conserved C-terminal domain GOQ09_05205 PF00270 DEAD/DEAH box helicase GOQ09_05205 PF00570 HRDC domain GOQ09_05205 PF16124 RecQ zinc-binding GOQ09_05205 PF09382 RQC domain GOQ09_05210 PF13406 Transglycosylase SLT domain GOQ09_05240 PF01263 Aldose 1-epimerase GOQ09_05245 PF08450 SMP-30/Gluconolactonase/LRE-like region GOQ09_05255 PF03466 LysR substrate binding domain GOQ09_05255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_05260 PF00171 Aldehyde dehydrogenase family GOQ09_05265 PF13407 Periplasmic binding protein domain GOQ09_05270 PF13407 Periplasmic binding protein domain GOQ09_05275 PF00005 ABC transporter GOQ09_05280 PF02653 Branched-chain amino acid transport system / permease component GOQ09_05285 PF00005 ABC transporter GOQ09_05290 PF02653 Branched-chain amino acid transport system / permease component GOQ09_05295 PF02653 Branched-chain amino acid transport system / permease component GOQ09_05300 PF00920 Dehydratase family GOQ09_05305 PF00701 Dihydrodipicolinate synthetase family GOQ09_05325 PF08245 Mur ligase middle domain GOQ09_05325 PF02875 Mur ligase family, glutamate ligase domain GOQ09_05325 PF08443 RimK-like ATP-grasp domain GOQ09_05330 PF08443 RimK-like ATP-grasp domain GOQ09_05330 PF08245 Mur ligase middle domain GOQ09_05330 PF02875 Mur ligase family, glutamate ligase domain GOQ09_05335 PF00005 ABC transporter GOQ09_05335 PF00664 ABC transporter transmembrane region GOQ09_05345 PF06508 Queuosine biosynthesis protein QueC GOQ09_05350 PF06472 ABC transporter transmembrane region 2 GOQ09_05350 PF00005 ABC transporter GOQ09_05355 PF01966 HD domain GOQ09_05365 PF08402 TOBE domain GOQ09_05365 PF00005 ABC transporter GOQ09_05370 PF00528 Binding-protein-dependent transport system inner membrane component GOQ09_05375 PF01266 FAD dependent oxidoreductase GOQ09_05375 PF05430 S-adenosyl-L-methionine-dependent methyltransferase GOQ09_05380 PF13419 Haloacid dehalogenase-like hydrolase GOQ09_05385 PF07690 Major Facilitator Superfamily GOQ09_05390 PF05506 Domain of unknown function (DUF756) GOQ09_05390 PF04185 Phosphoesterase family GOQ09_05395 PF04185 Phosphoesterase family GOQ09_05395 PF05506 Domain of unknown function (DUF756) GOQ09_05410 PF00482 Type II secretion system (T2SS), protein F GOQ09_05415 PF00437 Type II/IV secretion system protein GOQ09_05420 PF03958 Bacterial type II/III secretion system short domain GOQ09_05420 PF00263 Bacterial type II and III secretion system protein GOQ09_05445 PF07963 Prokaryotic N-terminal methylation motif GOQ09_05445 PF11612 Type II secretion system (T2SS), protein J GOQ09_05450 PF02501 Type II secretion system (T2SS), protein I GOQ09_05450 PF07963 Prokaryotic N-terminal methylation motif GOQ09_05460 PF07963 Prokaryotic N-terminal methylation motif GOQ09_05460 PF08334 Type II secretion system (T2SS), protein G GOQ09_05470 PF00291 Pyridoxal-phosphate dependent enzyme GOQ09_05470 PF00585 C-terminal regulatory domain of Threonine dehydratase GOQ09_05480 PF13609 Gram-negative porin GOQ09_05485 PF02566 OsmC-like protein GOQ09_05490 PF03232 Ubiquinone biosynthesis protein COQ7 GOQ09_05495 PF13609 Gram-negative porin GOQ09_05500 PF00528 Binding-protein-dependent transport system inner membrane component GOQ09_05510 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GOQ09_05515 PF00528 Binding-protein-dependent transport system inner membrane component GOQ09_05515 PF12911 N-terminal TM domain of oligopeptide transport permease C GOQ09_05520 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GOQ09_05520 PF00005 ABC transporter GOQ09_05525 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GOQ09_05525 PF00005 ABC transporter GOQ09_05530 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase GOQ09_05535 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain GOQ09_05535 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain GOQ09_05545 PF00528 Binding-protein-dependent transport system inner membrane component GOQ09_05550 PF08402 TOBE domain GOQ09_05550 PF00005 ABC transporter GOQ09_05565 PF00923 Transaldolase/Fructose-6-phosphate aldolase GOQ09_05570 PF00342 Phosphoglucose isomerase GOQ09_05575 PF04166 Pyridoxal phosphate biosynthetic protein PdxA GOQ09_05580 PF03401 Tripartite tricarboxylate transporter family receptor GOQ09_05585 PF03466 LysR substrate binding domain GOQ09_05585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_05595 PF00528 Binding-protein-dependent transport system inner membrane component GOQ09_05600 PF00528 Binding-protein-dependent transport system inner membrane component GOQ09_05605 PF03459 TOBE domain GOQ09_05605 PF17912 MalK OB fold domain GOQ09_05605 PF00005 ABC transporter GOQ09_05610 PF01232 Mannitol dehydrogenase Rossmann domain GOQ09_05610 PF08125 Mannitol dehydrogenase C-terminal domain GOQ09_05620 PF00923 Transaldolase/Fructose-6-phosphate aldolase GOQ09_05625 PF00294 pfkB family carbohydrate kinase GOQ09_05630 PF12833 Helix-turn-helix domain GOQ09_05630 PF00072 Response regulator receiver domain GOQ09_05635 PF00370 FGGY family of carbohydrate kinases, N-terminal domain GOQ09_05635 PF02782 FGGY family of carbohydrate kinases, C-terminal domain GOQ09_05640 PF00118 TCP-1/cpn60 chaperonin family GOQ09_05645 PF00166 Chaperonin 10 Kd subunit GOQ09_05650 PF03466 LysR substrate binding domain GOQ09_05650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_05660 PF07715 TonB-dependent Receptor Plug Domain GOQ09_05660 PF00593 TonB dependent receptor GOQ09_05665 PF13091 PLD-like domain GOQ09_05670 PF07715 TonB-dependent Receptor Plug Domain GOQ09_05670 PF00593 TonB dependent receptor GOQ09_05690 PF02773 S-adenosylmethionine synthetase, C-terminal domain GOQ09_05690 PF02772 S-adenosylmethionine synthetase, central domain GOQ09_05690 PF00438 S-adenosylmethionine synthetase, N-terminal domain GOQ09_05700 PF03279 Bacterial lipid A biosynthesis acyltransferase GOQ09_05710 PF01926 50S ribosome-binding GTPase GOQ09_05715 PF00034 Cytochrome c GOQ09_05720 PF05140 ResB-like family GOQ09_05725 PF01578 Cytochrome C assembly protein GOQ09_05730 PF00174 Oxidoreductase molybdopterin binding domain GOQ09_05735 PF01794 Ferric reductase like transmembrane component GOQ09_05740 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain GOQ09_05740 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain GOQ09_05750 PF01491 Frataxin-like domain GOQ09_05755 PF00905 Penicillin binding protein transpeptidase domain GOQ09_05755 PF17092 Penicillin-binding protein OB-like domain GOQ09_05755 PF00912 Transglycosylase GOQ09_05780 PF07660 Secretin and TonB N terminus short domain GOQ09_05780 PF03958 Bacterial type II/III secretion system short domain GOQ09_05780 PF00263 Bacterial type II and III secretion system protein GOQ09_05780 PF11741 AMIN domain GOQ09_05785 PF01202 Shikimate kinase GOQ09_05790 PF01761 3-dehydroquinate synthase GOQ09_05795 PF13286 Phosphohydrolase-associated domain GOQ09_05795 PF01966 HD domain GOQ09_05820 PF01645 Conserved region in glutamate synthase GOQ09_05820 PF04898 Glutamate synthase central domain GOQ09_05820 PF00310 Glutamine amidotransferases class-II GOQ09_05820 PF01493 GXGXG motif GOQ09_05825 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster GOQ09_05825 PF07992 Pyridine nucleotide-disulphide oxidoreductase GOQ09_05830 PF00005 ABC transporter GOQ09_05835 PF02405 Permease MlaE GOQ09_05840 PF02470 MlaD protein GOQ09_05845 PF04333 MlaA lipoprotein GOQ09_05860 PF00005 ABC transporter GOQ09_05865 PF01061 ABC-2 type transporter GOQ09_05870 PF01722 BolA-like protein GOQ09_05875 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) GOQ09_05880 PF01634 ATP phosphoribosyltransferase GOQ09_05890 PF00815 Histidinol dehydrogenase GOQ09_05905 PF00155 Aminotransferase class I and II GOQ09_05910 PF00475 Imidazoleglycerol-phosphate dehydratase GOQ09_05915 PF00117 Glutamine amidotransferase class-I GOQ09_05920 PF00977 Histidine biosynthesis protein GOQ09_05925 PF17760 UvrA interaction domain GOQ09_05925 PF00005 ABC transporter GOQ09_05925 PF17755 UvrA DNA-binding domain GOQ09_05930 PF00497 Bacterial extracellular solute-binding proteins, family 3 GOQ09_05935 PF00375 Sodium:dicarboxylate symporter family GOQ09_05945 PF00977 Histidine biosynthesis protein GOQ09_05950 PF01502 Phosphoribosyl-AMP cyclohydrolase GOQ09_05955 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase GOQ09_05965 PF01230 HIT domain GOQ09_05970 PF02416 mttA/Hcf106 family GOQ09_05975 PF02416 mttA/Hcf106 family GOQ09_05980 PF00902 Sec-independent protein translocase protein (TatC) GOQ09_05985 PF13180 PDZ domain GOQ09_05985 PF17820 PDZ domain GOQ09_05990 PF00083 Sugar (and other) transporter GOQ09_05990 PF08946 Osmosensory transporter coiled coil GOQ09_05995 PF01784 NIF3 (NGG1p interacting factor 3) GOQ09_06000 PF04166 Pyridoxal phosphate biosynthetic protein PdxA GOQ09_06005 PF01741 Large-conductance mechanosensitive channel, MscL GOQ09_06015 PF10531 SLBB domain GOQ09_06015 PF02563 Polysaccharide biosynthesis/export protein GOQ09_06020 PF01451 Low molecular weight phosphotyrosine protein phosphatase GOQ09_06025 PF02706 Chain length determinant protein GOQ09_06025 PF13807 G-rich domain on putative tyrosine kinase GOQ09_06025 PF13614 AAA domain GOQ09_06030 PF02397 Bacterial sugar transferase GOQ09_06040 PF00534 Glycosyl transferases group 1 GOQ09_06040 PF13439 Glycosyltransferase Family 4 GOQ09_06055 PF06082 Exopolysaccharide biosynthesis protein YbjH GOQ09_06070 PF00355 Rieske [2Fe-2S] domain GOQ09_06070 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal GOQ09_06075 PF00033 Cytochrome b/b6/petB GOQ09_06075 PF00032 Cytochrome b(C-terminal)/b6/petD GOQ09_06080 PF02167 Cytochrome C1 family GOQ09_06085 PF00043 Glutathione S-transferase, C-terminal domain GOQ09_06085 PF02798 Glutathione S-transferase, N-terminal domain GOQ09_06090 PF04386 Stringent starvation protein B GOQ09_06110 PF02272 DHHA1 domain GOQ09_06110 PF17768 RecJ OB domain GOQ09_06110 PF01368 DHH family GOQ09_06120 PF12704 MacB-like periplasmic core domain GOQ09_06120 PF02687 FtsX-like permease family GOQ09_06125 PF00005 ABC transporter GOQ09_06130 PF00574 Clp protease GOQ09_06135 PF01042 Endoribonuclease L-PSP GOQ09_06140 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GOQ09_06145 PF00528 Binding-protein-dependent transport system inner membrane component GOQ09_06150 PF00528 Binding-protein-dependent transport system inner membrane component GOQ09_06150 PF12911 N-terminal TM domain of oligopeptide transport permease C GOQ09_06155 PF00005 ABC transporter GOQ09_06155 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GOQ09_06160 PF00005 ABC transporter GOQ09_06160 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GOQ09_06170 PF01418 Helix-turn-helix domain, rpiR family GOQ09_06170 PF01380 SIS domain GOQ09_06175 PF07969 Amidohydrolase family GOQ09_06180 PF00171 Aldehyde dehydrogenase family GOQ09_06185 PF00005 ABC transporter GOQ09_06190 PF00005 ABC transporter GOQ09_06190 PF12399 Branched-chain amino acid ATP-binding cassette transporter GOQ09_06200 PF02653 Branched-chain amino acid transport system / permease component GOQ09_06215 PF01613 Flavin reductase like domain GOQ09_06235 PF01575 MaoC like domain GOQ09_06235 PF00171 Aldehyde dehydrogenase family GOQ09_06240 PF00005 ABC transporter GOQ09_06245 PF00005 ABC transporter GOQ09_06245 PF12399 Branched-chain amino acid ATP-binding cassette transporter GOQ09_06260 PF00970 Oxidoreductase FAD-binding domain GOQ09_06260 PF00175 Oxidoreductase NAD-binding domain GOQ09_06260 PF00111 2Fe-2S iron-sulfur cluster binding domain GOQ09_06265 PF01883 Iron-sulfur cluster assembly protein GOQ09_06270 PF05138 Phenylacetic acid catabolic protein GOQ09_06275 PF06243 Phenylacetic acid degradation B GOQ09_06280 PF05138 Phenylacetic acid catabolic protein GOQ09_06290 PF03061 Thioesterase superfamily GOQ09_06295 PF00378 Enoyl-CoA hydratase/isomerase GOQ09_06300 PF00132 Bacterial transferase hexapeptide (six repeats) GOQ09_06305 PF00440 Bacterial regulatory proteins, tetR family GOQ09_06310 PF00106 short chain dehydrogenase GOQ09_06320 PF13519 von Willebrand factor type A domain GOQ09_06320 PF07584 Aerotolerance regulator N-terminal GOQ09_06325 PF01882 Protein of unknown function DUF58 GOQ09_06330 PF07726 ATPase family associated with various cellular activities (AAA) GOQ09_06330 PF17863 AAA lid domain GOQ09_06335 PF00595 PDZ domain GOQ09_06340 PF01026 TatD related DNase GOQ09_06360 PF00437 Type II/IV secretion system protein GOQ09_06360 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain GOQ09_06370 PF01970 Tripartite tricarboxylate transporter TctA family GOQ09_06375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_06375 PF03466 LysR substrate binding domain GOQ09_06380 PF03401 Tripartite tricarboxylate transporter family receptor GOQ09_06395 PF00106 short chain dehydrogenase GOQ09_06405 PF08240 Alcohol dehydrogenase GroES-like domain GOQ09_06405 PF00107 Zinc-binding dehydrogenase GOQ09_06415 PF02690 Na+/Pi-cotransporter GOQ09_06420 PF00149 Calcineurin-like phosphoesterase GOQ09_06425 PF00005 ABC transporter GOQ09_06425 PF03459 TOBE domain GOQ09_06430 PF00528 Binding-protein-dependent transport system inner membrane component GOQ09_06435 PF00528 Binding-protein-dependent transport system inner membrane component GOQ09_06445 PF00356 Bacterial regulatory proteins, lacI family GOQ09_06450 PF01252 Signal peptidase (SPase) II GOQ09_06455 PF06827 Zinc finger found in FPG and IleRS GOQ09_06455 PF08264 Anticodon-binding domain of tRNA GOQ09_06455 PF00133 tRNA synthetases class I (I, L, M and V) GOQ09_06460 PF01687 Riboflavin kinase GOQ09_06460 PF06574 FAD synthetase GOQ09_06470 PF00378 Enoyl-CoA hydratase/isomerase GOQ09_06480 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GOQ09_06480 PF02770 Acyl-CoA dehydrogenase, middle domain GOQ09_06480 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GOQ09_06485 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GOQ09_06485 PF02770 Acyl-CoA dehydrogenase, middle domain GOQ09_06485 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GOQ09_06490 PF00551 Formyl transferase GOQ09_06510 PF01029 NusB family GOQ09_06510 PF01189 16S rRNA methyltransferase RsmB/F GOQ09_06520 PF00471 Ribosomal protein L33 GOQ09_06525 PF00830 Ribosomal L28 family GOQ09_06530 PF07992 Pyridine nucleotide-disulphide oxidoreductase GOQ09_06535 PF00027 Cyclic nucleotide-binding domain GOQ09_06535 PF13545 Crp-like helix-turn-helix domain GOQ09_06540 PF01580 FtsK/SpoIIIE family GOQ09_06540 PF17854 FtsK alpha domain GOQ09_06540 PF09397 Ftsk gamma domain GOQ09_06540 PF13491 4TM region of DNA translocase FtsK/SpoIIIE GOQ09_06545 PF03548 Outer membrane lipoprotein carrier protein LolA GOQ09_06550 PF00004 ATPase family associated with various cellular activities (AAA) GOQ09_06550 PF16193 AAA C-terminal domain GOQ09_06550 PF12002 MgsA AAA+ ATPase C terminal GOQ09_06555 PF02653 Branched-chain amino acid transport system / permease component GOQ09_06560 PF02653 Branched-chain amino acid transport system / permease component GOQ09_06560 PF11862 Domain of unknown function (DUF3382) GOQ09_06565 PF00005 ABC transporter GOQ09_06565 PF12399 Branched-chain amino acid ATP-binding cassette transporter GOQ09_06570 PF00005 ABC transporter GOQ09_06575 PF03401 Tripartite tricarboxylate transporter family receptor GOQ09_06580 PF00970 Oxidoreductase FAD-binding domain GOQ09_06580 PF00111 2Fe-2S iron-sulfur cluster binding domain GOQ09_06580 PF00175 Oxidoreductase NAD-binding domain GOQ09_06595 PF00291 Pyridoxal-phosphate dependent enzyme GOQ09_06600 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain GOQ09_06600 PF09297 NADH pyrophosphatase zinc ribbon domain GOQ09_06600 PF00293 NUDIX domain GOQ09_06605 PF01206 Sulfurtransferase TusA GOQ09_06610 PF00483 Nucleotidyl transferase GOQ09_06615 PF10458 Valyl tRNA synthetase tRNA binding arm GOQ09_06615 PF08264 Anticodon-binding domain of tRNA GOQ09_06615 PF00133 tRNA synthetases class I (I, L, M and V) GOQ09_06620 PF03883 Peroxide stress protein YaaA GOQ09_06635 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term GOQ09_06635 PF14489 QueF-like protein GOQ09_06640 PF00106 short chain dehydrogenase GOQ09_06655 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GOQ09_06655 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GOQ09_06655 PF02770 Acyl-CoA dehydrogenase, middle domain GOQ09_06660 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GOQ09_06660 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GOQ09_06660 PF02770 Acyl-CoA dehydrogenase, middle domain GOQ09_06665 PF03401 Tripartite tricarboxylate transporter family receptor GOQ09_06670 PF00501 AMP-binding enzyme GOQ09_06670 PF13193 AMP-binding enzyme C-terminal domain GOQ09_06705 PF00817 impB/mucB/samB family GOQ09_06705 PF11798 IMS family HHH motif GOQ09_06705 PF11799 impB/mucB/samB family C-terminal domain GOQ09_06725 PF00083 Sugar (and other) transporter GOQ09_06735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_06735 PF03466 LysR substrate binding domain GOQ09_06740 PF01070 FMN-dependent dehydrogenase GOQ09_06745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_06745 PF03466 LysR substrate binding domain GOQ09_06760 PF02560 Cyanate lyase C-terminal domain GOQ09_06765 PF00106 short chain dehydrogenase GOQ09_06800 PF17287 POTRA domain GOQ09_06800 PF08479 POTRA domain, ShlB-type GOQ09_06800 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB GOQ09_06820 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component GOQ09_06830 PF03480 Bacterial extracellular solute-binding protein, family 7 GOQ09_06835 PF01220 Dehydroquinase class II GOQ09_06855 PF07690 Major Facilitator Superfamily GOQ09_06860 PF00392 Bacterial regulatory proteins, gntR family GOQ09_06860 PF07729 FCD domain GOQ09_06865 PF04536 TPM domain GOQ09_06870 PF00905 Penicillin binding protein transpeptidase domain GOQ09_06870 PF00912 Transglycosylase GOQ09_06880 PF01810 LysE type translocator GOQ09_06900 PF00581 Rhodanese-like domain GOQ09_06910 PF00005 ABC transporter GOQ09_06920 PF00586 AIR synthase related protein, N-terminal domain GOQ09_06920 PF02769 AIR synthase related protein, C-terminal domain GOQ09_06940 PF01661 Macro domain GOQ09_06980 PF00206 Lyase GOQ09_06980 PF14698 Argininosuccinate lyase C-terminal GOQ09_06985 PF07694 5TMR of 5TMR-LYT GOQ09_06985 PF06580 Histidine kinase GOQ09_06990 PF00072 Response regulator receiver domain GOQ09_06990 PF04397 LytTr DNA-binding domain GOQ09_06995 PF01594 AI-2E family transporter GOQ09_07010 PF03466 LysR substrate binding domain GOQ09_07010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_07015 PF07690 Major Facilitator Superfamily GOQ09_07025 PF00311 Phosphoenolpyruvate carboxylase GOQ09_07030 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain GOQ09_07030 PF03900 Porphobilinogen deaminase, C-terminal domain GOQ09_07050 PF10150 Ribonuclease E/G family GOQ09_07050 PF12111 Polyribonucleotide phosphorylase C terminal GOQ09_07050 PF00575 S1 RNA binding domain GOQ09_07055 PF01479 S4 domain GOQ09_07055 PF00849 RNA pseudouridylate synthase GOQ09_07070 PF01343 Peptidase family S49 GOQ09_07070 PF06965 Na+/H+ antiporter 1 GOQ09_07075 PF07690 Major Facilitator Superfamily GOQ09_07080 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GOQ09_07085 PF02545 Maf-like protein GOQ09_07090 PF02620 Large ribosomal RNA subunit accumulation protein YceD GOQ09_07095 PF01783 Ribosomal L32p protein family GOQ09_07100 PF02504 Fatty acid synthesis protein GOQ09_07105 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GOQ09_07105 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal GOQ09_07110 PF00698 Acyl transferase domain GOQ09_07120 PF00550 Phosphopantetheine attachment site GOQ09_07125 PF02801 Beta-ketoacyl synthase, C-terminal domain GOQ09_07125 PF00109 Beta-ketoacyl synthase, N-terminal domain GOQ09_07135 PF08281 Sigma-70, region 4 GOQ09_07135 PF04542 Sigma-70 region 2 GOQ09_07150 PF13180 PDZ domain GOQ09_07150 PF17820 PDZ domain GOQ09_07155 PF06421 GTP-binding protein LepA C-terminus GOQ09_07155 PF03144 Elongation factor Tu domain 2 GOQ09_07155 PF00679 Elongation factor G C-terminus GOQ09_07155 PF00009 Elongation factor Tu GTP binding domain GOQ09_07160 PF10502 Signal peptidase, peptidase S26 GOQ09_07170 PF14622 Ribonuclease-III-like GOQ09_07170 PF00035 Double-stranded RNA binding motif GOQ09_07175 PF07650 KH domain GOQ09_07175 PF01926 50S ribosome-binding GTPase GOQ09_07180 PF11967 Recombination protein O N terminal GOQ09_07180 PF02565 Recombination protein O C terminal GOQ09_07185 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ GOQ09_07190 PF01648 4'-phosphopantetheinyl transferase superfamily GOQ09_07195 PF00933 Glycosyl hydrolase family 3 N terminal domain GOQ09_07200 PF01863 Protein of unknown function DUF45 GOQ09_07205 PF00012 Hsp70 protein GOQ09_07210 PF00152 tRNA synthetases class II (D, K and N) GOQ09_07210 PF01336 OB-fold nucleic acid binding domain GOQ09_07220 PF02325 YGGT family GOQ09_07225 PF17848 Acetyl-coA carboxylase zinc finger domain GOQ09_07225 PF01039 Carboxyl transferase domain GOQ09_07230 PF00290 Tryptophan synthase alpha chain GOQ09_07235 PF00291 Pyridoxal-phosphate dependent enzyme GOQ09_07240 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase GOQ09_07245 PF01416 tRNA pseudouridine synthase GOQ09_07255 PF02774 Semialdehyde dehydrogenase, dimerisation domain GOQ09_07255 PF01118 Semialdehyde dehydrogenase, NAD binding domain GOQ09_07260 PF00180 Isocitrate/isopropylmalate dehydrogenase GOQ09_07265 PF00694 Aconitase C-terminal domain GOQ09_07270 PF00330 Aconitase family (aconitate hydratase) GOQ09_07275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_07275 PF03466 LysR substrate binding domain GOQ09_07285 PF00285 Citrate synthase, C-terminal domain GOQ09_07290 PF03937 Flavinator of succinate dehydrogenase GOQ09_07295 PF13085 2Fe-2S iron-sulfur cluster binding domain GOQ09_07300 PF00890 FAD binding domain GOQ09_07300 PF02910 Fumarate reductase flavoprotein C-term GOQ09_07315 PF07702 UTRA domain GOQ09_07315 PF00392 Bacterial regulatory proteins, gntR family GOQ09_07320 PF00056 lactate/malate dehydrogenase, NAD binding domain GOQ09_07320 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain GOQ09_07340 PF11791 Aconitate B N-terminal domain GOQ09_07340 PF06434 Aconitate hydratase 2 N-terminus GOQ09_07340 PF00330 Aconitase family (aconitate hydratase) GOQ09_07355 PF00694 Aconitase C-terminal domain GOQ09_07355 PF00330 Aconitase family (aconitate hydratase) GOQ09_07380 PF07670 Nucleoside recognition GOQ09_07380 PF02421 Ferrous iron transport protein B GOQ09_07380 PF07664 Ferrous iron transport protein B C terminus GOQ09_07390 PF01494 FAD binding domain GOQ09_07400 PF03301 Tryptophan 2,3-dioxygenase GOQ09_07410 PF00266 Aminotransferase class-V GOQ09_07415 PF04199 Putative cyclase GOQ09_07425 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain GOQ09_07425 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain GOQ09_07430 PF00202 Aminotransferase class-III GOQ09_07440 PF01649 Ribosomal protein S20 GOQ09_07445 PF03023 Lipid II flippase MurJ GOQ09_07450 PF13369 Transglutaminase-like superfamily GOQ09_07460 PF03795 YCII-related domain GOQ09_07465 PF03795 YCII-related domain GOQ09_07470 PF08281 Sigma-70, region 4 GOQ09_07470 PF04542 Sigma-70 region 2 GOQ09_07475 PF12833 Helix-turn-helix domain GOQ09_07475 PF02311 AraC-like ligand binding domain GOQ09_07495 PF00586 AIR synthase related protein, N-terminal domain GOQ09_07495 PF02769 AIR synthase related protein, C-terminal domain GOQ09_07500 PF00308 Bacterial dnaA protein GOQ09_07505 PF12626 Polymerase A arginine-rich C-terminus GOQ09_07505 PF01743 Poly A polymerase head domain GOQ09_07505 PF12627 Probable RNA and SrmB- binding site of polymerase A GOQ09_07510 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) GOQ09_07515 PF01865 Protein of unknown function DUF47 GOQ09_07520 PF01384 Phosphate transporter family GOQ09_07535 PF00886 Ribosomal protein S16 GOQ09_07540 PF01782 RimM N-terminal domain GOQ09_07540 PF05239 PRC-barrel domain GOQ09_07545 PF01746 tRNA (Guanine-1)-methyltransferase GOQ09_07550 PF01245 Ribosomal protein L19 GOQ09_07555 PF00293 NUDIX domain GOQ09_07560 PF03186 CobD/Cbib protein GOQ09_07560 PF17113 Regulatory signalling modulator protein AmpE GOQ09_07565 PF00155 Aminotransferase class I and II GOQ09_07575 PF03193 RsgA GTPase GOQ09_07580 PF01329 Pterin 4 alpha carbinolamine dehydratase GOQ09_07585 PF01435 Peptidase family M48 GOQ09_07590 PF00929 Exonuclease GOQ09_07595 PF00270 DEAD/DEAH box helicase GOQ09_07595 PF00271 Helicase conserved C-terminal domain GOQ09_07600 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus GOQ09_07600 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus GOQ09_07605 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain GOQ09_07605 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GOQ09_07605 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain GOQ09_07610 PF00561 alpha/beta hydrolase fold GOQ09_07615 PF00107 Zinc-binding dehydrogenase GOQ09_07615 PF08240 Alcohol dehydrogenase GroES-like domain GOQ09_07635 PF00111 2Fe-2S iron-sulfur cluster binding domain GOQ09_07635 PF00175 Oxidoreductase NAD-binding domain GOQ09_07640 PF00848 Ring hydroxylating alpha subunit (catalytic domain) GOQ09_07640 PF00355 Rieske [2Fe-2S] domain GOQ09_07650 PF13193 AMP-binding enzyme C-terminal domain GOQ09_07650 PF00501 AMP-binding enzyme GOQ09_07655 PF00108 Thiolase, N-terminal domain GOQ09_07655 PF02803 Thiolase, C-terminal domain GOQ09_07665 PF04199 Putative cyclase GOQ09_07675 PF13458 Periplasmic binding protein GOQ09_07680 PF13458 Periplasmic binding protein GOQ09_07685 PF00848 Ring hydroxylating alpha subunit (catalytic domain) GOQ09_07685 PF00355 Rieske [2Fe-2S] domain GOQ09_07690 PF00866 Ring hydroxylating beta subunit GOQ09_07700 PF02653 Branched-chain amino acid transport system / permease component GOQ09_07705 PF00005 ABC transporter GOQ09_07705 PF12399 Branched-chain amino acid ATP-binding cassette transporter GOQ09_07710 PF00005 ABC transporter GOQ09_07715 PF00501 AMP-binding enzyme GOQ09_07715 PF13193 AMP-binding enzyme C-terminal domain GOQ09_07720 PF00106 short chain dehydrogenase GOQ09_07755 PF03009 Glycerophosphoryl diester phosphodiesterase family GOQ09_07765 PF00672 HAMP domain GOQ09_07765 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GOQ09_07765 PF02203 Tar ligand binding domain homologue GOQ09_07775 PF00106 short chain dehydrogenase GOQ09_07790 PF00263 Bacterial type II and III secretion system protein GOQ09_07790 PF04972 BON domain GOQ09_07790 PF13629 Pilus formation protein N terminal region GOQ09_07835 PF00437 Type II/IV secretion system protein GOQ09_07850 PF00196 Bacterial regulatory proteins, luxR family GOQ09_07865 PF07859 alpha/beta hydrolase fold GOQ09_07870 PF00478 IMP dehydrogenase / GMP reductase domain GOQ09_07875 PF00580 UvrD/REP helicase N-terminal domain GOQ09_07875 PF13361 UvrD-like helicase C-terminal domain GOQ09_07895 PF01636 Phosphotransferase enzyme family GOQ09_07905 PF01612 3'-5' exonuclease GOQ09_07905 PF00476 DNA polymerase family A GOQ09_07905 PF01367 5'-3' exonuclease, C-terminal SAM fold GOQ09_07905 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain GOQ09_07910 PF07690 Major Facilitator Superfamily GOQ09_07915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_07915 PF03466 LysR substrate binding domain GOQ09_07920 PF07687 Peptidase dimerisation domain GOQ09_07920 PF01546 Peptidase family M20/M25/M40 GOQ09_07925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_07925 PF03466 LysR substrate binding domain GOQ09_07930 PF01266 FAD dependent oxidoreductase GOQ09_07935 PF00497 Bacterial extracellular solute-binding proteins, family 3 GOQ09_07945 PF01738 Dienelactone hydrolase family GOQ09_07960 PF01266 FAD dependent oxidoreductase GOQ09_07965 PF07883 Cupin domain GOQ09_07965 PF01381 Helix-turn-helix GOQ09_07980 PF00005 ABC transporter GOQ09_07990 PF00581 Rhodanese-like domain GOQ09_08005 PF02609 Exonuclease VII small subunit GOQ09_08010 PF00348 Polyprenyl synthetase GOQ09_08015 PF02780 Transketolase, C-terminal domain GOQ09_08015 PF02779 Transketolase, pyrimidine binding domain GOQ09_08015 PF13292 1-deoxy-D-xylulose-5-phosphate synthase GOQ09_08020 PF03480 Bacterial extracellular solute-binding protein, family 7 GOQ09_08025 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component GOQ09_08035 PF12867 DinB superfamily GOQ09_08035 PF03781 Sulfatase-modifying factor enzyme 1 GOQ09_08040 PF07690 Major Facilitator Superfamily GOQ09_08045 PF12728 Helix-turn-helix domain GOQ09_08045 PF12727 PBP superfamily domain GOQ09_08050 PF00202 Aminotransferase class-III GOQ09_08055 PF03466 LysR substrate binding domain GOQ09_08055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_08060 PF00392 Bacterial regulatory proteins, gntR family GOQ09_08060 PF07840 FadR C-terminal domain GOQ09_08070 PF02653 Branched-chain amino acid transport system / permease component GOQ09_08080 PF12399 Branched-chain amino acid ATP-binding cassette transporter GOQ09_08080 PF00005 ABC transporter GOQ09_08085 PF00005 ABC transporter GOQ09_08090 PF01546 Peptidase family M20/M25/M40 GOQ09_08090 PF07687 Peptidase dimerisation domain GOQ09_08095 PF07364 Metallopeptidase family M81 GOQ09_08095 PF07171 MlrC C-terminus GOQ09_08100 PF00528 Binding-protein-dependent transport system inner membrane component GOQ09_08105 PF00005 ABC transporter GOQ09_08110 PF12849 PBP superfamily domain GOQ09_08125 PF01799 [2Fe-2S] binding domain GOQ09_08125 PF00111 2Fe-2S iron-sulfur cluster binding domain GOQ09_08130 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain GOQ09_08130 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase GOQ09_08155 PF13478 XdhC Rossmann domain GOQ09_08155 PF02625 XdhC and CoxI family GOQ09_08160 PF03334 Na+/H+ antiporter subunit GOQ09_08165 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) GOQ09_08175 PF00361 Proton-conducting membrane transporter GOQ09_08180 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L GOQ09_08185 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter GOQ09_08185 PF13244 Domain of unknown function (DUF4040) GOQ09_08185 PF00361 Proton-conducting membrane transporter GOQ09_08185 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus GOQ09_08190 PF02537 CrcB-like protein, Camphor Resistance (CrcB) GOQ09_08195 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component GOQ09_08205 PF03480 Bacterial extracellular solute-binding protein, family 7 GOQ09_08215 PF18073 Rubredoxin metal binding domain GOQ09_08225 PF00216 Bacterial DNA-binding protein GOQ09_08230 PF00575 S1 RNA binding domain GOQ09_08235 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) GOQ09_08240 PF02153 Prephenate dehydrogenase GOQ09_08245 PF01817 Chorismate mutase type II GOQ09_08245 PF01842 ACT domain GOQ09_08245 PF00800 Prephenate dehydratase GOQ09_08250 PF00266 Aminotransferase class-V GOQ09_08260 PF03989 DNA gyrase C-terminal domain, beta-propeller GOQ09_08260 PF00521 DNA gyrase/topoisomerase IV, subunit A GOQ09_08265 PF00691 OmpA family GOQ09_08275 PF13419 Haloacid dehalogenase-like hydrolase GOQ09_08285 PF13847 Methyltransferase domain GOQ09_08285 PF10119 Predicted methyltransferase regulatory domain GOQ09_08295 PF01479 S4 domain GOQ09_08295 PF00849 RNA pseudouridylate synthase GOQ09_08320 PF18146 Damage-inducible protein CinA KH domain GOQ09_08320 PF00994 Probable molybdopterin binding domain GOQ09_08320 PF02464 Competence-damaged protein GOQ09_08335 PF00989 PAS fold GOQ09_08335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GOQ09_08335 PF00512 His Kinase A (phospho-acceptor) domain GOQ09_08340 PF00158 Sigma-54 interaction domain GOQ09_08340 PF02954 Bacterial regulatory protein, Fis family GOQ09_08340 PF00072 Response regulator receiver domain GOQ09_08350 PF03372 Endonuclease/Exonuclease/phosphatase family GOQ09_08355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_08355 PF03466 LysR substrate binding domain GOQ09_08390 PF16916 Dimerisation domain of Zinc Transporter GOQ09_08390 PF01545 Cation efflux family GOQ09_08400 PF06745 KaiC GOQ09_08405 PF16736 Single Cache-like GOQ09_08405 PF00989 PAS fold GOQ09_08405 PF00512 His Kinase A (phospho-acceptor) domain GOQ09_08405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GOQ09_08410 PF03706 Lysylphosphatidylglycerol synthase TM region GOQ09_08415 PF01068 ATP dependent DNA ligase domain GOQ09_08415 PF13298 DNA polymerase Ligase (LigD) GOQ09_08415 PF04679 ATP dependent DNA ligase C terminal region GOQ09_08430 PF00186 Dihydrofolate reductase GOQ09_08435 PF00303 Thymidylate synthase GOQ09_08440 PF02979 Nitrile hydratase, alpha chain GOQ09_08455 PF01565 FAD binding domain GOQ09_08455 PF02913 FAD linked oxidases, C-terminal domain GOQ09_08465 PF03631 Virulence factor BrkB GOQ09_08475 PF00085 Thioredoxin GOQ09_08485 PF03466 LysR substrate binding domain GOQ09_08485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_08495 PF03401 Tripartite tricarboxylate transporter family receptor GOQ09_08500 PF00561 alpha/beta hydrolase fold GOQ09_08500 PF08386 TAP-like protein GOQ09_08505 PF01053 Cys/Met metabolism PLP-dependent enzyme GOQ09_08520 PF00962 Adenosine/AMP deaminase GOQ09_08525 PF03466 LysR substrate binding domain GOQ09_08525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_08555 PF08241 Methyltransferase domain GOQ09_08570 PF04055 Radical SAM superfamily GOQ09_08580 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase GOQ09_08580 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain GOQ09_08585 PF14525 AraC-binding-like domain GOQ09_08605 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GOQ09_08615 PF00756 Putative esterase GOQ09_08620 PF00561 alpha/beta hydrolase fold GOQ09_08625 PF08240 Alcohol dehydrogenase GroES-like domain GOQ09_08625 PF00107 Zinc-binding dehydrogenase GOQ09_08630 PF02798 Glutathione S-transferase, N-terminal domain GOQ09_08640 PF00355 Rieske [2Fe-2S] domain GOQ09_08640 PF00111 2Fe-2S iron-sulfur cluster binding domain GOQ09_08645 PF01220 Dehydroquinase class II GOQ09_08650 PF04293 SpoVR like protein GOQ09_08655 PF04285 Protein of unknown function (DUF444) GOQ09_08660 PF08298 PrkA AAA domain GOQ09_08660 PF06798 PrkA serine protein kinase C-terminal domain GOQ09_08665 PF00684 DnaJ central domain GOQ09_08665 PF01556 DnaJ C terminal domain GOQ09_08665 PF00226 DnaJ domain GOQ09_08670 PF00012 Hsp70 protein GOQ09_08675 PF01025 GrpE GOQ09_08680 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GOQ09_08690 PF02666 Phosphatidylserine decarboxylase GOQ09_08695 PF03401 Tripartite tricarboxylate transporter family receptor GOQ09_08700 PF10282 Lactonase, 7-bladed beta-propeller GOQ09_08715 PF08666 SAF domain GOQ09_08715 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus GOQ09_08720 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component GOQ09_08725 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component GOQ09_08730 PF03480 Bacterial extracellular solute-binding protein, family 7 GOQ09_08735 PF08450 SMP-30/Gluconolactonase/LRE-like region GOQ09_08740 PF01370 NAD dependent epimerase/dehydratase family GOQ09_08745 PF00392 Bacterial regulatory proteins, gntR family GOQ09_08745 PF07729 FCD domain GOQ09_08750 PF03401 Tripartite tricarboxylate transporter family receptor GOQ09_08755 PF00701 Dihydrodipicolinate synthetase family GOQ09_08765 PF13378 Enolase C-terminal domain-like GOQ09_08765 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain GOQ09_08770 PF00171 Aldehyde dehydrogenase family GOQ09_08775 PF07690 Major Facilitator Superfamily GOQ09_08785 PF00528 Binding-protein-dependent transport system inner membrane component GOQ09_08795 PF02321 Outer membrane efflux protein GOQ09_08810 PF00005 ABC transporter GOQ09_08815 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GOQ09_08820 PF00440 Bacterial regulatory proteins, tetR family GOQ09_08825 PF13091 PLD-like domain GOQ09_08825 PF13396 Phospholipase_D-nuclease N-terminal GOQ09_08830 PF02798 Glutathione S-transferase, N-terminal domain GOQ09_08830 PF00043 Glutathione S-transferase, C-terminal domain GOQ09_08835 PF01717 Cobalamin-independent synthase, Catalytic domain GOQ09_08840 PF00355 Rieske [2Fe-2S] domain GOQ09_08845 PF00392 Bacterial regulatory proteins, gntR family GOQ09_08845 PF07729 FCD domain GOQ09_08855 PF13458 Periplasmic binding protein GOQ09_08870 PF12399 Branched-chain amino acid ATP-binding cassette transporter GOQ09_08870 PF00005 ABC transporter GOQ09_08875 PF00005 ABC transporter GOQ09_08880 PF07519 Tannase and feruloyl esterase GOQ09_08895 PF03466 LysR substrate binding domain GOQ09_08895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_08900 PF00682 HMGL-like GOQ09_08905 PF02515 CoA-transferase family III GOQ09_08910 PF03401 Tripartite tricarboxylate transporter family receptor GOQ09_08915 PF00893 Small Multidrug Resistance protein GOQ09_08920 PF00005 ABC transporter GOQ09_08920 PF00571 CBS domain GOQ09_08925 PF07690 Major Facilitator Superfamily GOQ09_08930 PF04546 Sigma-70, non-essential region GOQ09_08930 PF04539 Sigma-70 region 3 GOQ09_08930 PF04545 Sigma-70, region 4 GOQ09_08930 PF03979 Sigma-70 factor, region 1.1 GOQ09_08930 PF04542 Sigma-70 region 2 GOQ09_08930 PF00140 Sigma-70 factor, region 1.2 GOQ09_08935 PF13662 Toprim domain GOQ09_08935 PF01807 CHC2 zinc finger GOQ09_08935 PF08278 DNA primase DnaG DnaB-binding GOQ09_08935 PF08275 DNA primase catalytic core, N-terminal domain GOQ09_08935 PF10410 DnaB-helicase binding domain of primase GOQ09_08940 PF03631 Virulence factor BrkB GOQ09_08945 PF00106 short chain dehydrogenase GOQ09_08950 PF09361 Phasin protein GOQ09_08955 PF00850 Histone deacetylase domain GOQ09_08970 PF05532 CsbD-like GOQ09_08975 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family GOQ09_08975 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain GOQ09_08985 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GOQ09_08985 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GOQ09_08990 PF02646 RmuC family GOQ09_09000 PF03641 Possible lysine decarboxylase GOQ09_09005 PF00378 Enoyl-CoA hydratase/isomerase GOQ09_09010 PF01132 Elongation factor P (EF-P) OB domain GOQ09_09010 PF09285 Elongation factor P, C-terminal GOQ09_09010 PF08207 Elongation factor P (EF-P) KOW-like domain GOQ09_09025 PF08459 UvrC Helix-hairpin-helix N-terminal GOQ09_09025 PF02151 UvrB/uvrC motif GOQ09_09025 PF01541 GIY-YIG catalytic domain GOQ09_09030 PF01066 CDP-alcohol phosphatidyltransferase GOQ09_09040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_09040 PF03466 LysR substrate binding domain GOQ09_09045 PF00561 alpha/beta hydrolase fold GOQ09_09050 PF00180 Isocitrate/isopropylmalate dehydrogenase GOQ09_09055 PF00216 Bacterial DNA-binding protein GOQ09_09100 PF08240 Alcohol dehydrogenase GroES-like domain GOQ09_09100 PF00550 Phosphopantetheine attachment site GOQ09_09100 PF08659 KR domain GOQ09_09100 PF00107 Zinc-binding dehydrogenase GOQ09_09100 PF16197 Ketoacyl-synthetase C-terminal extension GOQ09_09100 PF02801 Beta-ketoacyl synthase, C-terminal domain GOQ09_09100 PF00698 Acyl transferase domain GOQ09_09100 PF14765 Polyketide synthase dehydratase GOQ09_09100 PF00109 Beta-ketoacyl synthase, N-terminal domain GOQ09_09105 PF01975 Survival protein SurE GOQ09_09115 PF01551 Peptidase family M23 GOQ09_09115 PF01476 LysM domain GOQ09_09120 PF04542 Sigma-70 region 2 GOQ09_09120 PF04545 Sigma-70, region 4 GOQ09_09120 PF00140 Sigma-70 factor, region 1.2 GOQ09_09120 PF04539 Sigma-70 region 3 GOQ09_09125 PF05958 tRNA (Uracil-5-)-methyltransferase GOQ09_09130 PF01027 Inhibitor of apoptosis-promoting Bax1 GOQ09_09135 PF03928 Haem-degrading GOQ09_09145 PF02472 Biopolymer transport protein ExbD/TolR GOQ09_09150 PF01618 MotA/TolQ/ExbB proton channel family GOQ09_09165 PF00593 TonB dependent receptor GOQ09_09165 PF07715 TonB-dependent Receptor Plug Domain GOQ09_09170 PF13640 2OG-Fe(II) oxygenase superfamily GOQ09_09170 PF18331 PKHD-type hydroxylase C-terminal domain GOQ09_09185 PF00210 Ferritin-like domain GOQ09_09190 PF10417 C-terminal domain of 1-Cys peroxiredoxin GOQ09_09190 PF00578 AhpC/TSA family GOQ09_09195 PF07992 Pyridine nucleotide-disulphide oxidoreductase GOQ09_09195 PF13192 Thioredoxin domain GOQ09_09200 PF03618 Kinase/pyrophosphorylase GOQ09_09205 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain GOQ09_09205 PF00391 PEP-utilising enzyme, mobile domain GOQ09_09205 PF02896 PEP-utilising enzyme, TIM barrel domain GOQ09_09215 PF01250 Ribosomal protein S6 GOQ09_09225 PF01084 Ribosomal protein S18 GOQ09_09230 PF01281 Ribosomal protein L9, N-terminal domain GOQ09_09230 PF03948 Ribosomal protein L9, C-terminal domain GOQ09_09235 PF03796 DnaB-like helicase C terminal domain GOQ09_09235 PF00772 DnaB-like helicase N terminal domain GOQ09_09260 PF13638 PIN domain GOQ09_09260 PF02562 PhoH-like protein GOQ09_09265 PF00578 AhpC/TSA family GOQ09_09275 PF00155 Aminotransferase class I and II GOQ09_09280 PF00742 Homoserine dehydrogenase GOQ09_09280 PF03447 Homoserine dehydrogenase, NAD binding domain GOQ09_09280 PF01842 ACT domain GOQ09_09285 PF00291 Pyridoxal-phosphate dependent enzyme GOQ09_09285 PF14821 Threonine synthase N terminus GOQ09_09290 PF03205 Molybdopterin guanine dinucleotide synthesis protein B GOQ09_09295 PF03454 MoeA C-terminal region (domain IV) GOQ09_09295 PF03453 MoeA N-terminal region (domain I and II) GOQ09_09295 PF00994 Probable molybdopterin binding domain GOQ09_09300 PF02597 ThiS family GOQ09_09305 PF00701 Dihydrodipicolinate synthetase family GOQ09_09310 PF02391 MoaE protein GOQ09_09315 PF03401 Tripartite tricarboxylate transporter family receptor GOQ09_09320 PF10431 C-terminal, D2-small domain, of ClpB protein GOQ09_09320 PF02861 Clp amino terminal domain, pathogenicity island component GOQ09_09320 PF07724 AAA domain (Cdc48 subfamily) GOQ09_09320 PF00004 ATPase family associated with various cellular activities (AAA) GOQ09_09320 PF17871 AAA lid domain GOQ09_09330 PF00501 AMP-binding enzyme GOQ09_09335 PF00005 ABC transporter GOQ09_09355 PF12399 Branched-chain amino acid ATP-binding cassette transporter GOQ09_09355 PF00005 ABC transporter GOQ09_09360 PF17754 MftR C-terminal domain GOQ09_09360 PF00440 Bacterial regulatory proteins, tetR family GOQ09_09365 PF02803 Thiolase, C-terminal domain GOQ09_09365 PF00108 Thiolase, N-terminal domain GOQ09_09370 PF00472 RF-1 domain GOQ09_09385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_09385 PF03466 LysR substrate binding domain GOQ09_09390 PF00916 Sulfate permease family GOQ09_09390 PF01740 STAS domain GOQ09_09395 PF02801 Beta-ketoacyl synthase, C-terminal domain GOQ09_09395 PF00109 Beta-ketoacyl synthase, N-terminal domain GOQ09_09400 PF00550 Phosphopantetheine attachment site GOQ09_09415 PF07690 Major Facilitator Superfamily GOQ09_09425 PF03960 ArsC family GOQ09_09435 PF00885 6,7-dimethyl-8-ribityllumazine synthase GOQ09_09440 PF06224 Winged helix DNA-binding domain GOQ09_09455 PF02894 Oxidoreductase family, C-terminal alpha/beta domain GOQ09_09455 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GOQ09_09460 PF03401 Tripartite tricarboxylate transporter family receptor GOQ09_09465 PF17938 Tetracyclin repressor-like, C-terminal domain GOQ09_09465 PF00440 Bacterial regulatory proteins, tetR family GOQ09_09470 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GOQ09_09470 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GOQ09_09470 PF00205 Thiamine pyrophosphate enzyme, central domain GOQ09_09490 PF00463 Isocitrate lyase family GOQ09_09495 PF03129 Anticodon binding domain GOQ09_09495 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain GOQ09_09495 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GOQ09_09495 PF02824 TGS domain GOQ09_09500 PF00707 Translation initiation factor IF-3, C-terminal domain GOQ09_09500 PF05198 Translation initiation factor IF-3, N-terminal domain GOQ09_09505 PF01632 Ribosomal protein L35 GOQ09_09510 PF00453 Ribosomal protein L20 GOQ09_09515 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain GOQ09_09515 PF01409 tRNA synthetases class II core domain (F) GOQ09_09520 PF01588 Putative tRNA binding domain GOQ09_09520 PF03147 Ferredoxin-fold anticodon binding domain GOQ09_09520 PF03484 tRNA synthetase B5 domain GOQ09_09520 PF03483 B3/4 domain GOQ09_09520 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain GOQ09_09525 PF00216 Bacterial DNA-binding protein GOQ09_09545 PF00563 EAL domain GOQ09_09545 PF00990 Diguanylate cyclase, GGDEF domain GOQ09_09545 PF03707 Bacterial signalling protein N terminal repeat GOQ09_09560 PF00990 Diguanylate cyclase, GGDEF domain GOQ09_09560 PF05231 MASE1 GOQ09_09560 PF08447 PAS fold GOQ09_09560 PF13426 PAS domain GOQ09_09560 PF00563 EAL domain GOQ09_09560 PF08448 PAS fold GOQ09_09565 PF07690 Major Facilitator Superfamily GOQ09_09570 PF02954 Bacterial regulatory protein, Fis family GOQ09_09570 PF00158 Sigma-54 interaction domain GOQ09_09575 PF00970 Oxidoreductase FAD-binding domain GOQ09_09575 PF00175 Oxidoreductase NAD-binding domain GOQ09_09575 PF00042 Globin GOQ09_09595 PF08240 Alcohol dehydrogenase GroES-like domain GOQ09_09595 PF00107 Zinc-binding dehydrogenase GOQ09_09600 PF00440 Bacterial regulatory proteins, tetR family GOQ09_09605 PF04055 Radical SAM superfamily GOQ09_09630 PF00512 His Kinase A (phospho-acceptor) domain GOQ09_09630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GOQ09_09630 PF13493 Domain of unknown function (DUF4118) GOQ09_09630 PF02702 Osmosensitive K+ channel His kinase sensor domain GOQ09_09635 PF03401 Tripartite tricarboxylate transporter family receptor GOQ09_09645 PF07729 FCD domain GOQ09_09645 PF00392 Bacterial regulatory proteins, gntR family GOQ09_09650 PF00920 Dehydratase family GOQ09_09655 PF03737 Aldolase/RraA GOQ09_09660 PF03401 Tripartite tricarboxylate transporter family receptor GOQ09_09670 PF08281 Sigma-70, region 4 GOQ09_09670 PF04542 Sigma-70 region 2 GOQ09_09675 PF03328 HpcH/HpaI aldolase/citrate lyase family GOQ09_09680 PF00171 Aldehyde dehydrogenase family GOQ09_09685 PF08666 SAF domain GOQ09_09685 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus GOQ09_09690 PF03401 Tripartite tricarboxylate transporter family receptor GOQ09_09695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_09695 PF03466 LysR substrate binding domain GOQ09_09705 PF00072 Response regulator receiver domain GOQ09_09705 PF00196 Bacterial regulatory proteins, luxR family GOQ09_09720 PF11066 Protein of unknown function (DUF2867) GOQ09_09720 PF13460 NAD(P)H-binding GOQ09_09735 PF02535 ZIP Zinc transporter GOQ09_09750 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain GOQ09_09750 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain GOQ09_09750 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain GOQ09_09755 PF16363 GDP-mannose 4,6 dehydratase GOQ09_09770 PF01370 NAD dependent epimerase/dehydratase family GOQ09_09775 PF16363 GDP-mannose 4,6 dehydratase GOQ09_09780 PF00107 Zinc-binding dehydrogenase GOQ09_09780 PF08240 Alcohol dehydrogenase GroES-like domain GOQ09_09785 PF02894 Oxidoreductase family, C-terminal alpha/beta domain GOQ09_09785 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GOQ09_09790 PF00534 Glycosyl transferases group 1 GOQ09_09790 PF13439 Glycosyltransferase Family 4 GOQ09_09810 PF08003 Protein of unknown function (DUF1698) GOQ09_09840 PF04552 Sigma-54, DNA binding domain GOQ09_09840 PF04963 Sigma-54 factor, core binding domain GOQ09_09840 PF00309 Sigma-54 factor, Activator interacting domain (AID) GOQ09_09850 PF02954 Bacterial regulatory protein, Fis family GOQ09_09850 PF00158 Sigma-54 interaction domain GOQ09_09850 PF00072 Response regulator receiver domain GOQ09_09860 PF03705 CheR methyltransferase, all-alpha domain GOQ09_09860 PF08448 PAS fold GOQ09_09860 PF01739 CheR methyltransferase, SAM binding domain GOQ09_09860 PF01339 CheB methylesterase GOQ09_09865 PF00072 Response regulator receiver domain GOQ09_09865 PF01339 CheB methylesterase GOQ09_09870 PF05067 Manganese containing catalase GOQ09_09875 PF05974 Domain of unknown function (DUF892) GOQ09_09900 PF00115 Cytochrome C and Quinol oxidase polypeptide I GOQ09_09930 PF01339 CheB methylesterase GOQ09_09930 PF01739 CheR methyltransferase, SAM binding domain GOQ09_09930 PF08448 PAS fold GOQ09_09930 PF03705 CheR methyltransferase, all-alpha domain GOQ09_09945 PF03358 NADPH-dependent FMN reductase GOQ09_09950 PF03960 ArsC family GOQ09_09955 PF01022 Bacterial regulatory protein, arsR family GOQ09_09960 PF01758 Sodium Bile acid symporter family GOQ09_10000 PF00563 EAL domain GOQ09_10000 PF10442 FIST C domain GOQ09_10000 PF00990 Diguanylate cyclase, GGDEF domain GOQ09_10000 PF08495 FIST N domain GOQ09_10005 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain GOQ09_10005 PF00437 Type II/IV secretion system protein GOQ09_10010 PF00563 EAL domain GOQ09_10010 PF00990 Diguanylate cyclase, GGDEF domain GOQ09_10010 PF03707 Bacterial signalling protein N terminal repeat GOQ09_10015 PF00128 Alpha amylase, catalytic domain GOQ09_10015 PF16657 Maltogenic Amylase, C-terminal domain GOQ09_10020 PF00128 Alpha amylase, catalytic domain GOQ09_10025 PF05139 Erythromycin esterase GOQ09_10025 PF00156 Phosphoribosyl transferase domain GOQ09_10030 PF00156 Phosphoribosyl transferase domain GOQ09_10030 PF05139 Erythromycin esterase GOQ09_10040 PF00011 Hsp20/alpha crystallin family GOQ09_10045 PF00011 Hsp20/alpha crystallin family GOQ09_10060 PF02806 Alpha amylase, C-terminal all-beta domain GOQ09_10060 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) GOQ09_10060 PF00128 Alpha amylase, catalytic domain GOQ09_10065 PF00128 Alpha amylase, catalytic domain GOQ09_10065 PF11896 Domain of unknown function (DUF3416) GOQ09_10070 PF00128 Alpha amylase, catalytic domain GOQ09_10070 PF16657 Maltogenic Amylase, C-terminal domain GOQ09_10080 PF00128 Alpha amylase, catalytic domain GOQ09_10080 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) GOQ09_10085 PF11941 Domain of unknown function (DUF3459) GOQ09_10085 PF00128 Alpha amylase, catalytic domain GOQ09_10085 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) GOQ09_10090 PF02446 4-alpha-glucanotransferase GOQ09_10100 PF12833 Helix-turn-helix domain GOQ09_10100 PF12852 Cupin GOQ09_10105 PF00106 short chain dehydrogenase GOQ09_10110 PF00561 alpha/beta hydrolase fold GOQ09_10115 PF03466 LysR substrate binding domain GOQ09_10115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_10120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_10120 PF03466 LysR substrate binding domain GOQ09_10130 PF03401 Tripartite tricarboxylate transporter family receptor GOQ09_10135 PF14031 Putative serine dehydratase domain GOQ09_10135 PF01168 Alanine racemase, N-terminal domain GOQ09_10235 PF08241 Methyltransferase domain GOQ09_10280 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GOQ09_10280 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GOQ09_10280 PF00205 Thiamine pyrophosphate enzyme, central domain GOQ09_10290 PF00571 CBS domain GOQ09_10295 PF00857 Isochorismatase family GOQ09_10300 PF00106 short chain dehydrogenase GOQ09_10335 PF01266 FAD dependent oxidoreductase GOQ09_10340 PF16653 Saccharopine dehydrogenase C-terminal domain GOQ09_10340 PF03435 Saccharopine dehydrogenase NADP binding domain GOQ09_10350 PF13091 PLD-like domain GOQ09_10355 PF01551 Peptidase family M23 GOQ09_10355 PF01476 LysM domain GOQ09_10360 PF05981 CreA protein GOQ09_10365 PF00293 NUDIX domain GOQ09_10365 PF09297 NADH pyrophosphatase zinc ribbon domain GOQ09_10370 PF01557 Fumarylacetoacetate (FAA) hydrolase family GOQ09_10375 PF13417 Glutathione S-transferase, N-terminal domain GOQ09_10390 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus GOQ09_10395 PF02803 Thiolase, C-terminal domain GOQ09_10395 PF00108 Thiolase, N-terminal domain GOQ09_10400 PF03466 LysR substrate binding domain GOQ09_10400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_10405 PF03401 Tripartite tricarboxylate transporter family receptor GOQ09_10420 PF03328 HpcH/HpaI aldolase/citrate lyase family GOQ09_10425 PF03401 Tripartite tricarboxylate transporter family receptor GOQ09_10430 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase GOQ09_10435 PF01799 [2Fe-2S] binding domain GOQ09_10435 PF00111 2Fe-2S iron-sulfur cluster binding domain GOQ09_10440 PF00034 Cytochrome c GOQ09_10445 PF00171 Aldehyde dehydrogenase family GOQ09_10450 PF00180 Isocitrate/isopropylmalate dehydrogenase GOQ09_10455 PF00005 ABC transporter GOQ09_10455 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GOQ09_10460 PF12911 N-terminal TM domain of oligopeptide transport permease C GOQ09_10460 PF00528 Binding-protein-dependent transport system inner membrane component GOQ09_10465 PF00528 Binding-protein-dependent transport system inner membrane component GOQ09_10470 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GOQ09_10475 PF01266 FAD dependent oxidoreductase GOQ09_10490 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GOQ09_10495 PF00202 Aminotransferase class-III GOQ09_10500 PF01037 Lrp/AsnC ligand binding domain GOQ09_10520 PF12951 Passenger-associated-transport-repeat GOQ09_10530 PF01467 Cytidylyltransferase-like GOQ09_10530 PF00293 NUDIX domain GOQ09_10535 PF02540 NAD synthase GOQ09_10535 PF00795 Carbon-nitrogen hydrolase GOQ09_10540 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain GOQ09_10540 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family GOQ09_10575 PF00106 short chain dehydrogenase GOQ09_10580 PF00375 Sodium:dicarboxylate symporter family GOQ09_10585 PF00999 Sodium/hydrogen exchanger family GOQ09_10585 PF02254 TrkA-N domain GOQ09_10595 PF01842 ACT domain GOQ09_10595 PF03447 Homoserine dehydrogenase, NAD binding domain GOQ09_10595 PF00742 Homoserine dehydrogenase GOQ09_10630 PF03401 Tripartite tricarboxylate transporter family receptor GOQ09_10635 PF02525 Flavodoxin-like fold GOQ09_10640 PF03466 LysR substrate binding domain GOQ09_10640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_10655 PF01037 Lrp/AsnC ligand binding domain GOQ09_10660 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GOQ09_10660 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GOQ09_10660 PF00205 Thiamine pyrophosphate enzyme, central domain GOQ09_10670 PF03401 Tripartite tricarboxylate transporter family receptor GOQ09_10675 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase GOQ09_10675 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit GOQ09_10680 PF03401 Tripartite tricarboxylate transporter family receptor GOQ09_10685 PF03737 Aldolase/RraA GOQ09_10690 PF04909 Amidohydrolase GOQ09_10695 PF03466 LysR substrate binding domain GOQ09_10695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_10720 PF09176 Methylene-tetrahydromethanopterin dehydrogenase, N-terminal GOQ09_10730 PF02289 Cyclohydrolase (MCH) GOQ09_10745 PF08714 Formaldehyde-activating enzyme (Fae) GOQ09_10755 PF02954 Bacterial regulatory protein, Fis family GOQ09_10755 PF00158 Sigma-54 interaction domain GOQ09_10755 PF01590 GAF domain GOQ09_10795 PF00977 Histidine biosynthesis protein GOQ09_10805 PF07969 Amidohydrolase family GOQ09_10810 PF01913 Formylmethanofuran-tetrahydromethanopterin formyltransferase GOQ09_10810 PF02741 FTR, proximal lobe GOQ09_10825 PF00425 chorismate binding enzyme GOQ09_10825 PF00117 Glutamine amidotransferase class-I GOQ09_10825 PF04715 Anthranilate synthase component I, N terminal region GOQ09_10865 PF00072 Response regulator receiver domain GOQ09_10865 PF00196 Bacterial regulatory proteins, luxR family GOQ09_10870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GOQ09_10870 PF07730 Histidine kinase GOQ09_10870 PF05231 MASE1 GOQ09_10875 PF00561 alpha/beta hydrolase fold GOQ09_10880 PF08042 PqqA family GOQ09_10885 PF12706 Beta-lactamase superfamily domain GOQ09_10890 PF03070 TENA/THI-4/PQQC family GOQ09_10895 PF05402 Coenzyme PQQ synthesis protein D (PqqD) GOQ09_10900 PF13186 Iron-sulfur cluster-binding domain GOQ09_10900 PF04055 Radical SAM superfamily GOQ09_10930 PF07726 ATPase family associated with various cellular activities (AAA) GOQ09_10930 PF17863 AAA lid domain GOQ09_10960 PF13442 Cytochrome C oxidase, cbb3-type, subunit III GOQ09_10965 PF13360 PQQ-like domain GOQ09_10970 PF00005 ABC transporter GOQ09_10990 PF03401 Tripartite tricarboxylate transporter family receptor GOQ09_11000 PF03466 LysR substrate binding domain GOQ09_11000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_11005 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain GOQ09_11005 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain GOQ09_11010 PF00101 Ribulose bisphosphate carboxylase, small chain GOQ09_11015 PF17866 AAA lid domain GOQ09_11015 PF00004 ATPase family associated with various cellular activities (AAA) GOQ09_11020 PF13419 Haloacid dehalogenase-like hydrolase GOQ09_11030 PF13419 Haloacid dehalogenase-like hydrolase GOQ09_11035 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain GOQ09_11040 PF00485 Phosphoribulokinase / Uridine kinase family GOQ09_11045 PF02780 Transketolase, C-terminal domain GOQ09_11045 PF02779 Transketolase, pyrimidine binding domain GOQ09_11045 PF00456 Transketolase, thiamine diphosphate binding domain GOQ09_11050 PF01116 Fructose-bisphosphate aldolase class-II GOQ09_11055 PF07519 Tannase and feruloyl esterase GOQ09_11060 PF03741 Integral membrane protein TerC family GOQ09_11065 PF07311 Dodecin GOQ09_11070 PF03401 Tripartite tricarboxylate transporter family receptor GOQ09_11080 PF07519 Tannase and feruloyl esterase GOQ09_11085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_11085 PF03466 LysR substrate binding domain GOQ09_11090 PF03401 Tripartite tricarboxylate transporter family receptor GOQ09_11095 PF09423 PhoD-like phosphatase GOQ09_11095 PF16655 PhoD-like phosphatase, N-terminal domain GOQ09_11115 PF02322 Cytochrome bd terminal oxidase subunit II GOQ09_11120 PF01654 Cytochrome bd terminal oxidase subunit I GOQ09_11135 PF02321 Outer membrane efflux protein GOQ09_11150 PF00873 AcrB/AcrD/AcrF family GOQ09_11155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_11155 PF03466 LysR substrate binding domain GOQ09_11175 PF00106 short chain dehydrogenase GOQ09_11220 PF01207 Dihydrouridine synthase (Dus) GOQ09_11225 PF09339 IclR helix-turn-helix domain GOQ09_11230 PF00392 Bacterial regulatory proteins, gntR family GOQ09_11230 PF07729 FCD domain GOQ09_11250 PF01039 Carboxyl transferase domain GOQ09_11255 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GOQ09_11255 PF00289 Biotin carboxylase, N-terminal domain GOQ09_11255 PF02785 Biotin carboxylase C-terminal domain GOQ09_11260 PF04055 Radical SAM superfamily GOQ09_11260 PF06968 Biotin and Thiamin Synthesis associated domain GOQ09_11270 PF01037 Lrp/AsnC ligand binding domain GOQ09_11275 PF00892 EamA-like transporter family GOQ09_11285 PF04060 Putative Fe-S cluster GOQ09_11295 PF00155 Aminotransferase class I and II GOQ09_11305 PF02082 Transcriptional regulator GOQ09_11310 PF00266 Aminotransferase class-V GOQ09_11315 PF01592 NifU-like N terminal domain GOQ09_11320 PF01521 Iron-sulphur cluster biosynthesis GOQ09_11325 PF07743 HSCB C-terminal oligomerisation domain GOQ09_11330 PF00012 Hsp70 protein GOQ09_11335 PF00111 2Fe-2S iron-sulfur cluster binding domain GOQ09_11340 PF00929 Exonuclease GOQ09_11355 PF01266 FAD dependent oxidoreductase GOQ09_11370 PF01180 Dihydroorotate dehydrogenase GOQ09_11375 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) GOQ09_11385 PF01432 Peptidase family M3 GOQ09_11390 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GOQ09_11390 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GOQ09_11395 PF00196 Bacterial regulatory proteins, luxR family GOQ09_11395 PF00072 Response regulator receiver domain GOQ09_11400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GOQ09_11400 PF00989 PAS fold GOQ09_11400 PF00512 His Kinase A (phospho-acceptor) domain GOQ09_11405 PF17831 Pyruvate dehydrogenase E1 component middle domain GOQ09_11405 PF00456 Transketolase, thiamine diphosphate binding domain GOQ09_11410 PF00364 Biotin-requiring enzyme GOQ09_11410 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) GOQ09_11410 PF02817 e3 binding domain GOQ09_11415 PF00227 Proteasome subunit GOQ09_11420 PF07992 Pyridine nucleotide-disulphide oxidoreductase GOQ09_11420 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GOQ09_11425 PF00877 NlpC/P60 family GOQ09_11430 PF07995 Glucose / Sorbosone dehydrogenase GOQ09_11445 PF16177 Acetyl-coenzyme A synthetase N-terminus GOQ09_11445 PF00501 AMP-binding enzyme GOQ09_11445 PF13193 AMP-binding enzyme C-terminal domain GOQ09_11450 PF16870 2-oxoglutarate dehydrogenase C-terminal GOQ09_11450 PF16078 2-oxoglutarate dehydrogenase N-terminus GOQ09_11450 PF00676 Dehydrogenase E1 component GOQ09_11450 PF02779 Transketolase, pyrimidine binding domain GOQ09_11455 PF02817 e3 binding domain GOQ09_11455 PF00364 Biotin-requiring enzyme GOQ09_11455 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) GOQ09_11460 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GOQ09_11460 PF07992 Pyridine nucleotide-disulphide oxidoreductase GOQ09_11465 PF03969 AFG1-like ATPase GOQ09_11485 PF06733 DEAD_2 GOQ09_11485 PF13307 Helicase C-terminal domain GOQ09_11490 PF13525 Outer membrane lipoprotein GOQ09_11495 PF00849 RNA pseudouridylate synthase GOQ09_11495 PF01479 S4 domain GOQ09_11500 PF04079 Segregation and condensation complex subunit ScpB GOQ09_11505 PF01479 S4 domain GOQ09_11505 PF00849 RNA pseudouridylate synthase GOQ09_11510 PF00334 Nucleoside diphosphate kinase GOQ09_11515 PF04055 Radical SAM superfamily GOQ09_11530 PF04551 GcpE protein GOQ09_11535 PF03129 Anticodon binding domain GOQ09_11535 PF13393 Histidyl-tRNA synthetase GOQ09_11545 PF13360 PQQ-like domain GOQ09_11550 PF01926 50S ribosome-binding GTPase GOQ09_11550 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal GOQ09_11555 PF17209 Hfq protein GOQ09_11560 PF01926 50S ribosome-binding GTPase GOQ09_11560 PF16360 GTP-binding GTPase Middle Region GOQ09_11560 PF13167 GTP-binding GTPase N-terminal GOQ09_11565 PF01145 SPFH domain / Band 7 family GOQ09_11565 PF12221 Bacterial membrane protein N terminal GOQ09_11570 PF01145 SPFH domain / Band 7 family GOQ09_11580 PF13393 Histidyl-tRNA synthetase GOQ09_11585 PF00709 Adenylosuccinate synthetase GOQ09_11600 PF18029 Glyoxalase-like domain GOQ09_11610 PF01053 Cys/Met metabolism PLP-dependent enzyme GOQ09_11625 PF13472 GDSL-like Lipase/Acylhydrolase family GOQ09_11630 PF00005 ABC transporter GOQ09_11640 PF08032 RNA 2'-O ribose methyltransferase substrate binding GOQ09_11640 PF00588 SpoU rRNA Methylase family GOQ09_11660 PF00248 Aldo/keto reductase family GOQ09_11665 PF02417 Chromate transporter GOQ09_11675 PF03631 Virulence factor BrkB GOQ09_11700 PF03401 Tripartite tricarboxylate transporter family receptor GOQ09_11710 PF01970 Tripartite tricarboxylate transporter TctA family GOQ09_11720 PF11842 Domain of unknown function (DUF3362) GOQ09_11720 PF04055 Radical SAM superfamily GOQ09_11720 PF08497 Radical SAM N-terminal GOQ09_11760 PF00378 Enoyl-CoA hydratase/isomerase GOQ09_11770 PF01168 Alanine racemase, N-terminal domain GOQ09_11770 PF14031 Putative serine dehydratase domain GOQ09_11790 PF09382 RQC domain GOQ09_11790 PF16124 RecQ zinc-binding GOQ09_11790 PF00270 DEAD/DEAH box helicase GOQ09_11790 PF00570 HRDC domain GOQ09_11790 PF00271 Helicase conserved C-terminal domain GOQ09_11885 PF01313 Bacterial export proteins, family 3 GOQ09_11890 PF01311 Bacterial export proteins, family 1 GOQ09_11895 PF01312 FlhB HrpN YscU SpaS Family GOQ09_11900 PF00771 FHIPEP family GOQ09_11905 PF00460 Flagella basal body rod protein GOQ09_11905 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GOQ09_11910 PF00460 Flagella basal body rod protein GOQ09_11910 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GOQ09_11920 PF02107 Flagellar L-ring protein GOQ09_11925 PF02119 Flagellar P-ring protein GOQ09_11935 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GOQ09_11935 PF00460 Flagella basal body rod protein GOQ09_11940 PF02049 Flagellar hook-basal body complex protein FliE GOQ09_11945 PF08345 Flagellar M-ring protein C-terminal GOQ09_11945 PF01514 Secretory protein of YscJ/FliF family GOQ09_11960 PF02874 ATP synthase alpha/beta family, beta-barrel domain GOQ09_11960 PF18269 T3SS EscN ATPase C-terminal domain GOQ09_11960 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GOQ09_11975 PF03963 Flagellar hook capping protein - N-terminal region GOQ09_11980 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GOQ09_11980 PF00460 Flagella basal body rod protein GOQ09_11980 PF07559 Flagellar basal body protein FlaE GOQ09_11990 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term GOQ09_12000 PF00813 FliP family GOQ09_12005 PF00140 Sigma-70 factor, region 1.2 GOQ09_12005 PF04539 Sigma-70 region 3 GOQ09_12005 PF04542 Sigma-70 region 2 GOQ09_12005 PF04545 Sigma-70, region 4 GOQ09_12040 PF13640 2OG-Fe(II) oxygenase superfamily GOQ09_12040 PF18331 PKHD-type hydroxylase C-terminal domain GOQ09_12060 PF00589 Phage integrase family GOQ09_12060 PF13356 Arm DNA-binding domain GOQ09_12080 PF12951 Passenger-associated-transport-repeat GOQ09_12085 PF03466 LysR substrate binding domain GOQ09_12085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_12100 PF00043 Glutathione S-transferase, C-terminal domain GOQ09_12100 PF02798 Glutathione S-transferase, N-terminal domain GOQ09_12105 PF07992 Pyridine nucleotide-disulphide oxidoreductase GOQ09_12115 PF17941 Polyphosphate kinase C-terminal domain 1 GOQ09_12115 PF02503 Polyphosphate kinase middle domain GOQ09_12115 PF13089 Polyphosphate kinase N-terminal domain GOQ09_12115 PF13090 Polyphosphate kinase C-terminal domain 2 GOQ09_12130 PF02541 Ppx/GppA phosphatase family GOQ09_12135 PF12849 PBP superfamily domain GOQ09_12140 PF00528 Binding-protein-dependent transport system inner membrane component GOQ09_12145 PF00528 Binding-protein-dependent transport system inner membrane component GOQ09_12150 PF00005 ABC transporter GOQ09_12155 PF01895 PhoU domain GOQ09_12160 PF00486 Transcriptional regulatory protein, C terminal GOQ09_12160 PF00072 Response regulator receiver domain GOQ09_12165 PF00512 His Kinase A (phospho-acceptor) domain GOQ09_12165 PF11808 Phosphate regulon sensor protein PhoR GOQ09_12165 PF00989 PAS fold GOQ09_12165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GOQ09_12170 PF01554 MatE GOQ09_12180 PF01197 Ribosomal protein L31 GOQ09_12185 PF02894 Oxidoreductase family, C-terminal alpha/beta domain GOQ09_12185 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GOQ09_12190 PF07497 Rho termination factor, RNA-binding domain GOQ09_12190 PF07498 Rho termination factor, N-terminal domain GOQ09_12190 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GOQ09_12195 PF00085 Thioredoxin GOQ09_12215 PF01638 HxlR-like helix-turn-helix GOQ09_12220 PF08241 Methyltransferase domain GOQ09_12230 PF12170 DNA polymerase III tau subunit V interacting with alpha GOQ09_12230 PF12169 DNA polymerase III subunits gamma and tau domain III GOQ09_12230 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding GOQ09_12235 PF02575 YbaB/EbfC DNA-binding family GOQ09_12240 PF13662 Toprim domain GOQ09_12240 PF02132 RecR protein GOQ09_12255 PF00005 ABC transporter GOQ09_12260 PF00528 Binding-protein-dependent transport system inner membrane component GOQ09_12265 PF01476 LysM domain GOQ09_12265 PF01464 Transglycosylase SLT domain GOQ09_12270 PF00753 Metallo-beta-lactamase superfamily GOQ09_12270 PF16123 Hydroxyacylglutathione hydrolase C-terminus GOQ09_12280 PF00075 RNase H GOQ09_12285 PF03454 MoeA C-terminal region (domain IV) GOQ09_12285 PF03453 MoeA N-terminal region (domain I and II) GOQ09_12285 PF00994 Probable molybdopterin binding domain GOQ09_12290 PF12804 MobA-like NTP transferase domain GOQ09_12295 PF04055 Radical SAM superfamily GOQ09_12295 PF06463 Molybdenum Cofactor Synthesis C GOQ09_12305 PF02535 ZIP Zinc transporter GOQ09_12310 PF00171 Aldehyde dehydrogenase family GOQ09_12320 PF13091 PLD-like domain GOQ09_12375 PF03030 Inorganic H+ pyrophosphatase GOQ09_12380 PF00719 Inorganic pyrophosphatase GOQ09_12395 PF02540 NAD synthase GOQ09_12395 PF00795 Carbon-nitrogen hydrolase GOQ09_12400 PF00543 Nitrogen regulatory protein P-II GOQ09_12405 PF03641 Possible lysine decarboxylase GOQ09_12410 PF01219 Prokaryotic diacylglycerol kinase GOQ09_12435 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GOQ09_12435 PF00205 Thiamine pyrophosphate enzyme, central domain GOQ09_12435 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GOQ09_12440 PF10369 Small subunit of acetolactate synthase GOQ09_12450 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain GOQ09_12450 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain GOQ09_12455 PF01066 CDP-alcohol phosphatidyltransferase GOQ09_12460 PF08502 LeuA allosteric (dimerisation) domain GOQ09_12460 PF00682 HMGL-like GOQ09_12465 PF08502 LeuA allosteric (dimerisation) domain GOQ09_12465 PF00682 HMGL-like GOQ09_12470 PF00768 D-alanyl-D-alanine carboxypeptidase GOQ09_12475 PF09339 IclR helix-turn-helix domain GOQ09_12475 PF01614 Bacterial transcriptional regulator GOQ09_12480 PF04376 Arginine-tRNA-protein transferase, N terminus GOQ09_12480 PF04377 Arginine-tRNA-protein transferase, C terminus GOQ09_12485 PF03588 Leucyl/phenylalanyl-tRNA protein transferase GOQ09_12490 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase GOQ09_12490 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain GOQ09_12500 PF01494 FAD binding domain GOQ09_12505 PF01614 Bacterial transcriptional regulator GOQ09_12505 PF09339 IclR helix-turn-helix domain GOQ09_12510 PF00486 Transcriptional regulatory protein, C terminal GOQ09_12510 PF00072 Response regulator receiver domain GOQ09_12515 PF00512 His Kinase A (phospho-acceptor) domain GOQ09_12515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GOQ09_12515 PF08521 Two-component sensor kinase N-terminal GOQ09_12520 PF13180 PDZ domain GOQ09_12520 PF17820 PDZ domain GOQ09_12540 PF00691 OmpA family GOQ09_12540 PF01389 OmpA-like transmembrane domain GOQ09_12545 PF05662 Coiled stalk of trimeric autotransporter adhesin GOQ09_12545 PF13018 Extended Signal Peptide of Type V secretion system GOQ09_12545 PF05658 Head domain of trimeric autotransporter adhesin GOQ09_12545 PF03895 YadA-like membrane anchor domain GOQ09_12565 PF07715 TonB-dependent Receptor Plug Domain GOQ09_12565 PF00593 TonB dependent receptor GOQ09_12570 PF02581 Thiamine monophosphate synthase GOQ09_12575 PF05690 Thiazole biosynthesis protein ThiG GOQ09_12585 PF01266 FAD dependent oxidoreductase GOQ09_12590 PF08543 Phosphomethylpyrimidine kinase GOQ09_12605 PF11953 Domain of unknown function (DUF3470) GOQ09_12605 PF00037 4Fe-4S binding domain GOQ09_12610 PF00009 Elongation factor Tu GTP binding domain GOQ09_12615 PF01507 Phosphoadenosine phosphosulfate reductase family GOQ09_12620 PF01507 Phosphoadenosine phosphosulfate reductase family GOQ09_12640 PF03576 Peptidase family S58 GOQ09_12645 PF00528 Binding-protein-dependent transport system inner membrane component GOQ09_12645 PF12911 N-terminal TM domain of oligopeptide transport permease C GOQ09_12650 PF00528 Binding-protein-dependent transport system inner membrane component GOQ09_12655 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GOQ09_12660 PF00005 ABC transporter GOQ09_12660 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GOQ09_12665 PF01112 Asparaginase GOQ09_12680 PF02321 Outer membrane efflux protein GOQ09_12690 PF00664 ABC transporter transmembrane region GOQ09_12690 PF00005 ABC transporter GOQ09_12695 PF00529 HlyD membrane-fusion protein of T1SS GOQ09_12695 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GOQ09_12700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GOQ09_12700 PF08521 Two-component sensor kinase N-terminal GOQ09_12700 PF00512 His Kinase A (phospho-acceptor) domain GOQ09_12705 PF00072 Response regulator receiver domain GOQ09_12705 PF00486 Transcriptional regulatory protein, C terminal GOQ09_12710 PF03466 LysR substrate binding domain GOQ09_12710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_12715 PF01266 FAD dependent oxidoreductase GOQ09_12720 PF00274 Fructose-bisphosphate aldolase class-I GOQ09_12725 PF01625 Peptide methionine sulfoxide reductase GOQ09_12750 PF05430 S-adenosyl-L-methionine-dependent methyltransferase GOQ09_12750 PF01266 FAD dependent oxidoreductase GOQ09_12755 PF04362 Bacterial Fe(2+) trafficking GOQ09_12765 PF03358 NADPH-dependent FMN reductase GOQ09_12770 PF09084 NMT1/THI5 like GOQ09_12775 PF00296 Luciferase-like monooxygenase GOQ09_12780 PF00528 Binding-protein-dependent transport system inner membrane component GOQ09_12785 PF09084 NMT1/THI5 like GOQ09_12790 PF00005 ABC transporter GOQ09_12795 PF01053 Cys/Met metabolism PLP-dependent enzyme GOQ09_12800 PF03459 TOBE domain GOQ09_12805 PF00132 Bacterial transferase hexapeptide (six repeats) GOQ09_12810 PF04820 Tryptophan halogenase GOQ09_12820 PF08546 Ketopantoate reductase PanE/ApbA C terminal GOQ09_12820 PF02558 Ketopantoate reductase PanE/ApbA GOQ09_12825 PF03358 NADPH-dependent FMN reductase GOQ09_12830 PF02525 Flavodoxin-like fold GOQ09_12835 PF03466 LysR substrate binding domain GOQ09_12835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_12840 PF10417 C-terminal domain of 1-Cys peroxiredoxin GOQ09_12840 PF00578 AhpC/TSA family GOQ09_12855 PF00528 Binding-protein-dependent transport system inner membrane component GOQ09_12860 PF00528 Binding-protein-dependent transport system inner membrane component GOQ09_12865 PF00005 ABC transporter GOQ09_12865 PF17850 CysA C-terminal regulatory domain GOQ09_12865 PF12857 TOBE-like domain GOQ09_12870 PF02600 Disulfide bond formation protein DsbB GOQ09_12880 PF07804 HipA-like C-terminal domain GOQ09_12880 PF13657 HipA N-terminal domain GOQ09_12895 PF06470 SMC proteins Flexible Hinge Domain GOQ09_12895 PF02463 RecF/RecN/SMC N terminal domain GOQ09_12905 PF12826 Helix-hairpin-helix motif GOQ09_12905 PF00533 BRCA1 C Terminus (BRCT) domain GOQ09_12905 PF03120 NAD-dependent DNA ligase OB-fold domain GOQ09_12905 PF03119 NAD-dependent DNA ligase C4 zinc finger domain GOQ09_12905 PF01653 NAD-dependent DNA ligase adenylation domain GOQ09_12915 PF01327 Polypeptide deformylase GOQ09_12925 PF00497 Bacterial extracellular solute-binding proteins, family 3 GOQ09_12930 PF00528 Binding-protein-dependent transport system inner membrane component GOQ09_12935 PF00528 Binding-protein-dependent transport system inner membrane component GOQ09_12940 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II GOQ09_12940 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I GOQ09_12940 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III GOQ09_12940 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain GOQ09_12945 PF01909 Nucleotidyltransferase domain GOQ09_12945 PF01966 HD domain GOQ09_12945 PF08335 GlnD PII-uridylyltransferase GOQ09_12950 PF00557 Metallopeptidase family M24 GOQ09_12955 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal GOQ09_12955 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain GOQ09_12955 PF02769 AIR synthase related protein, C-terminal domain GOQ09_12970 PF04279 Intracellular septation protein A GOQ09_12975 PF01641 SelR domain GOQ09_12980 PF02696 Uncharacterized ACR, YdiU/UPF0061 family GOQ09_12990 PF00135 Carboxylesterase family GOQ09_12995 PF00501 AMP-binding enzyme GOQ09_12995 PF13193 AMP-binding enzyme C-terminal domain GOQ09_13010 PF02653 Branched-chain amino acid transport system / permease component GOQ09_13020 PF00005 ABC transporter GOQ09_13020 PF12399 Branched-chain amino acid ATP-binding cassette transporter GOQ09_13025 PF00005 ABC transporter GOQ09_13030 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain GOQ09_13030 PF00378 Enoyl-CoA hydratase/isomerase GOQ09_13030 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GOQ09_13035 PF07687 Peptidase dimerisation domain GOQ09_13035 PF01546 Peptidase family M20/M25/M40 GOQ09_13040 PF02803 Thiolase, C-terminal domain GOQ09_13040 PF00108 Thiolase, N-terminal domain GOQ09_13045 PF12806 Acetyl-CoA dehydrogenase C-terminal like GOQ09_13045 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GOQ09_13045 PF02770 Acyl-CoA dehydrogenase, middle domain GOQ09_13045 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GOQ09_13065 PF00107 Zinc-binding dehydrogenase GOQ09_13065 PF16884 N-terminal domain of oxidoreductase GOQ09_13070 PF18158 Adaptive response protein AidB N-terminal domain GOQ09_13070 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GOQ09_13070 PF02770 Acyl-CoA dehydrogenase, middle domain GOQ09_13080 PF00106 short chain dehydrogenase GOQ09_13085 PF00005 ABC transporter GOQ09_13090 PF03466 LysR substrate binding domain GOQ09_13090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_13095 PF02525 Flavodoxin-like fold GOQ09_13100 PF00248 Aldo/keto reductase family GOQ09_13105 PF07690 Major Facilitator Superfamily GOQ09_13110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_13110 PF03466 LysR substrate binding domain GOQ09_13125 PF00266 Aminotransferase class-V GOQ09_13130 PF07729 FCD domain GOQ09_13130 PF00392 Bacterial regulatory proteins, gntR family GOQ09_13135 PF13183 4Fe-4S dicluster domain GOQ09_13135 PF01565 FAD binding domain GOQ09_13135 PF02913 FAD linked oxidases, C-terminal domain GOQ09_13150 PF01435 Peptidase family M48 GOQ09_13160 PF07690 Major Facilitator Superfamily GOQ09_13165 PF04403 Paraquat-inducible protein A GOQ09_13170 PF04403 Paraquat-inducible protein A GOQ09_13175 PF02470 MlaD protein GOQ09_13185 PF07690 Major Facilitator Superfamily GOQ09_13190 PF01554 MatE GOQ09_13215 PF16921 Tex protein YqgF-like domain GOQ09_13215 PF09371 Tex-like protein N-terminal domain GOQ09_13215 PF17674 HHH domain GOQ09_13215 PF00575 S1 RNA binding domain GOQ09_13225 PF03401 Tripartite tricarboxylate transporter family receptor GOQ09_13255 PF04717 Type VI secretion system, phage-baseplate injector GOQ09_13260 PF00465 Iron-containing alcohol dehydrogenase GOQ09_13265 PF07859 alpha/beta hydrolase fold GOQ09_13280 PF01571 Aminomethyltransferase folate-binding domain GOQ09_13285 PF02618 YceG-like family GOQ09_13290 PF02223 Thymidylate kinase GOQ09_13295 PF09115 DNA polymerase III, delta subunit, C terminal GOQ09_13305 PF01026 TatD related DNase GOQ09_13310 PF12796 Ankyrin repeats (3 copies) GOQ09_13320 PF04324 BFD-like [2Fe-2S] binding domain GOQ09_13320 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain GOQ09_13320 PF07992 Pyridine nucleotide-disulphide oxidoreductase GOQ09_13320 PF18267 Rubredoxin NAD+ reductase C-terminal domain GOQ09_13325 PF00486 Transcriptional regulatory protein, C terminal GOQ09_13325 PF00072 Response regulator receiver domain GOQ09_13365 PF08031 Berberine and berberine like GOQ09_13365 PF01565 FAD binding domain GOQ09_13370 PF00072 Response regulator receiver domain GOQ09_13370 PF00486 Transcriptional regulatory protein, C terminal GOQ09_13375 PF09084 NMT1/THI5 like GOQ09_13380 PF08448 PAS fold GOQ09_13380 PF00512 His Kinase A (phospho-acceptor) domain GOQ09_13380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GOQ09_13380 PF13188 PAS domain GOQ09_13380 PF00072 Response regulator receiver domain GOQ09_13395 PF02627 Carboxymuconolactone decarboxylase family GOQ09_13415 PF00672 HAMP domain GOQ09_13415 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GOQ09_13415 PF02203 Tar ligand binding domain homologue GOQ09_13430 PF02311 AraC-like ligand binding domain GOQ09_13430 PF12833 Helix-turn-helix domain GOQ09_13440 PF08447 PAS fold GOQ09_13440 PF00990 Diguanylate cyclase, GGDEF domain GOQ09_13440 PF00563 EAL domain GOQ09_13440 PF08448 PAS fold GOQ09_13450 PF00248 Aldo/keto reductase family GOQ09_13455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_13455 PF03466 LysR substrate binding domain GOQ09_13465 PF00392 Bacterial regulatory proteins, gntR family GOQ09_13470 PF01970 Tripartite tricarboxylate transporter TctA family GOQ09_13490 PF17158 Membrane-associated sensor, integral membrane domain GOQ09_13490 PF00990 Diguanylate cyclase, GGDEF domain GOQ09_13510 PF01068 ATP dependent DNA ligase domain GOQ09_13510 PF13298 DNA polymerase Ligase (LigD) GOQ09_13510 PF04679 ATP dependent DNA ligase C terminal region GOQ09_13515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_13515 PF03466 LysR substrate binding domain GOQ09_13525 PF16957 Malonate decarboxylase, alpha subunit, transporter GOQ09_13530 PF06857 Malonate decarboxylase delta subunit (MdcD) GOQ09_13535 PF01039 Carboxyl transferase domain GOQ09_13545 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG GOQ09_13550 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase GOQ09_13560 PF13193 AMP-binding enzyme C-terminal domain GOQ09_13560 PF00501 AMP-binding enzyme GOQ09_13560 PF16177 Acetyl-coenzyme A synthetase N-terminus GOQ09_13565 PF04304 Protein of unknown function (DUF454) GOQ09_13570 PF00067 Cytochrome P450 GOQ09_13575 PF03401 Tripartite tricarboxylate transporter family receptor GOQ09_13585 PF00679 Elongation factor G C-terminus GOQ09_13585 PF14492 Elongation Factor G, domain II GOQ09_13585 PF00009 Elongation factor Tu GTP binding domain GOQ09_13585 PF03764 Elongation factor G, domain IV GOQ09_13595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_13595 PF03466 LysR substrate binding domain GOQ09_13600 PF00701 Dihydrodipicolinate synthetase family GOQ09_13605 PF03401 Tripartite tricarboxylate transporter family receptor GOQ09_13630 PF02515 CoA-transferase family III GOQ09_13640 PF03401 Tripartite tricarboxylate transporter family receptor GOQ09_13645 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal GOQ09_13645 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GOQ09_13650 PF13452 N-terminal half of MaoC dehydratase GOQ09_13670 PF13193 AMP-binding enzyme C-terminal domain GOQ09_13670 PF00501 AMP-binding enzyme GOQ09_13675 PF03401 Tripartite tricarboxylate transporter family receptor GOQ09_13685 PF00501 AMP-binding enzyme GOQ09_13685 PF13193 AMP-binding enzyme C-terminal domain GOQ09_13700 PF00378 Enoyl-CoA hydratase/isomerase GOQ09_13705 PF00356 Bacterial regulatory proteins, lacI family GOQ09_13710 PF03480 Bacterial extracellular solute-binding protein, family 7 GOQ09_13715 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component GOQ09_13725 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain GOQ09_13725 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain GOQ09_13730 PF17042 Nucleotide-binding C-terminal domain GOQ09_13730 PF07005 Sugar-binding N-terminal domain GOQ09_13735 PF04324 BFD-like [2Fe-2S] binding domain GOQ09_13735 PF01077 Nitrite and sulphite reductase 4Fe-4S domain GOQ09_13735 PF18267 Rubredoxin NAD+ reductase C-terminal domain GOQ09_13735 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain GOQ09_13735 PF07992 Pyridine nucleotide-disulphide oxidoreductase GOQ09_13740 PF00355 Rieske [2Fe-2S] domain GOQ09_13745 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GOQ09_13755 PF00069 Protein kinase domain GOQ09_13755 PF03793 PASTA domain GOQ09_13760 PF00512 His Kinase A (phospho-acceptor) domain GOQ09_13760 PF07689 KaiB domain GOQ09_13760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GOQ09_13765 PF12697 Alpha/beta hydrolase family GOQ09_13775 PF12951 Passenger-associated-transport-repeat GOQ09_13785 PF12852 Cupin GOQ09_13785 PF12833 Helix-turn-helix domain GOQ09_13790 PF00561 alpha/beta hydrolase fold GOQ09_13805 PF05114 Protein of unknown function (DUF692) GOQ09_13825 PF00866 Ring hydroxylating beta subunit GOQ09_13830 PF00355 Rieske [2Fe-2S] domain GOQ09_13830 PF00848 Ring hydroxylating alpha subunit (catalytic domain) GOQ09_13835 PF00111 2Fe-2S iron-sulfur cluster binding domain GOQ09_13835 PF00175 Oxidoreductase NAD-binding domain GOQ09_13840 PF01738 Dienelactone hydrolase family GOQ09_13850 PF12833 Helix-turn-helix domain GOQ09_13855 PF00999 Sodium/hydrogen exchanger family GOQ09_13870 PF07963 Prokaryotic N-terminal methylation motif GOQ09_13870 PF14245 Type IV pilin PilA GOQ09_13915 PF06719 AraC-type transcriptional regulator N-terminus GOQ09_13915 PF12833 Helix-turn-helix domain GOQ09_13920 PF00248 Aldo/keto reductase family GOQ09_13930 PF00155 Aminotransferase class I and II GOQ09_13935 PF00202 Aminotransferase class-III GOQ09_13960 PF13307 Helicase C-terminal domain GOQ09_13960 PF00929 Exonuclease GOQ09_13960 PF04851 Type III restriction enzyme, res subunit GOQ09_13965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GOQ09_13965 PF00512 His Kinase A (phospho-acceptor) domain GOQ09_13965 PF09308 LuxQ, periplasmic GOQ09_13965 PF00072 Response regulator receiver domain GOQ09_13970 PF01739 CheR methyltransferase, SAM binding domain GOQ09_13970 PF03705 CheR methyltransferase, all-alpha domain GOQ09_13975 PF01339 CheB methylesterase GOQ09_13980 PF00512 His Kinase A (phospho-acceptor) domain GOQ09_13980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GOQ09_13990 PF16701 Adenylate cyclase regulatory domain GOQ09_13990 PF00211 Adenylate and Guanylate cyclase catalytic domain GOQ09_14000 PF17676 LD-carboxypeptidase C-terminal domain GOQ09_14000 PF02016 LD-carboxypeptidase N-terminal domain GOQ09_14005 PF14437 MafB19-like deaminase GOQ09_14030 PF00196 Bacterial regulatory proteins, luxR family GOQ09_14030 PF00072 Response regulator receiver domain GOQ09_14035 PF08447 PAS fold GOQ09_14035 PF00512 His Kinase A (phospho-acceptor) domain GOQ09_14035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GOQ09_14035 PF00989 PAS fold GOQ09_14035 PF13493 Domain of unknown function (DUF4118) GOQ09_14035 PF13426 PAS domain GOQ09_14050 PF00355 Rieske [2Fe-2S] domain GOQ09_14055 PF13577 SnoaL-like domain GOQ09_14060 PF00355 Rieske [2Fe-2S] domain GOQ09_14060 PF00848 Ring hydroxylating alpha subunit (catalytic domain) GOQ09_14065 PF00175 Oxidoreductase NAD-binding domain GOQ09_14065 PF00111 2Fe-2S iron-sulfur cluster binding domain GOQ09_14065 PF00970 Oxidoreductase FAD-binding domain GOQ09_14070 PF03466 LysR substrate binding domain GOQ09_14070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_14080 PF17932 Tetracyclin repressor-like, C-terminal domain GOQ09_14080 PF00440 Bacterial regulatory proteins, tetR family GOQ09_14090 PF03352 Methyladenine glycosylase GOQ09_14100 PF07715 TonB-dependent Receptor Plug Domain GOQ09_14100 PF00593 TonB dependent receptor GOQ09_14105 PF00005 ABC transporter GOQ09_14125 PF00117 Glutamine amidotransferase class-I GOQ09_14125 PF00958 GMP synthase C terminal domain GOQ09_14125 PF02540 NAD synthase GOQ09_14140 PF00478 IMP dehydrogenase / GMP reductase domain GOQ09_14140 PF00571 CBS domain GOQ09_14150 PF03658 RnfH family Ubiquitin GOQ09_14155 PF03364 Polyketide cyclase / dehydrase and lipid transport GOQ09_14160 PF01668 SmpB protein GOQ09_14170 PF08281 Sigma-70, region 4 GOQ09_14170 PF04542 Sigma-70 region 2 GOQ09_14195 PF01509 TruB family pseudouridylate synthase (N terminal domain) GOQ09_14195 PF16198 tRNA pseudouridylate synthase B C-terminal domain GOQ09_14200 PF02033 Ribosome-binding factor A GOQ09_14205 PF08364 Bacterial translation initiation factor IF-2 associated region GOQ09_14205 PF00009 Elongation factor Tu GTP binding domain GOQ09_14205 PF11987 Translation-initiation factor 2 GOQ09_14205 PF04760 Translation initiation factor IF-2, N-terminal region GOQ09_14210 PF13184 NusA-like KH domain GOQ09_14210 PF08529 NusA N-terminal domain GOQ09_14215 PF02576 RimP N-terminal domain GOQ09_14220 PF06779 Uncharacterised MFS-type transporter YbfB GOQ09_14225 PF00005 ABC transporter GOQ09_14225 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GOQ09_14230 PF12911 N-terminal TM domain of oligopeptide transport permease C GOQ09_14230 PF00528 Binding-protein-dependent transport system inner membrane component GOQ09_14235 PF00528 Binding-protein-dependent transport system inner membrane component GOQ09_14240 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GOQ09_14250 PF14743 DNA ligase OB-like domain GOQ09_14250 PF01068 ATP dependent DNA ligase domain GOQ09_14255 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain GOQ09_14255 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain GOQ09_14255 PF01276 Orn/Lys/Arg decarboxylase, major domain GOQ09_14265 PF01145 SPFH domain / Band 7 family GOQ09_14285 PF13458 Periplasmic binding protein GOQ09_14300 PF02789 Cytosol aminopeptidase family, N-terminal domain GOQ09_14300 PF00883 Cytosol aminopeptidase family, catalytic domain GOQ09_14320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_14320 PF03466 LysR substrate binding domain GOQ09_14325 PF00155 Aminotransferase class I and II GOQ09_14335 PF00271 Helicase conserved C-terminal domain GOQ09_14335 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold GOQ09_14335 PF04408 Helicase associated domain (HA2) GOQ09_14335 PF11898 Domain of unknown function (DUF3418) GOQ09_14335 PF00270 DEAD/DEAH box helicase GOQ09_14345 PF00583 Acetyltransferase (GNAT) family GOQ09_14345 PF00696 Amino acid kinase family GOQ09_14350 PF01810 LysE type translocator GOQ09_14380 PF00155 Aminotransferase class I and II GOQ09_14385 PF00132 Bacterial transferase hexapeptide (six repeats) GOQ09_14385 PF14602 Hexapeptide repeat of succinyl-transferase GOQ09_14385 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal GOQ09_14390 PF00437 Type II/IV secretion system protein GOQ09_14395 PF07687 Peptidase dimerisation domain GOQ09_14395 PF01546 Peptidase family M20/M25/M40 GOQ09_14400 PF05175 Methyltransferase small domain GOQ09_14415 PF01726 LexA DNA binding domain GOQ09_14415 PF00717 Peptidase S24-like GOQ09_14420 PF04909 Amidohydrolase GOQ09_14425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_14425 PF03466 LysR substrate binding domain GOQ09_14430 PF03401 Tripartite tricarboxylate transporter family receptor GOQ09_14435 PF13609 Gram-negative porin GOQ09_14450 PF03741 Integral membrane protein TerC family GOQ09_14455 PF00512 His Kinase A (phospho-acceptor) domain GOQ09_14455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GOQ09_14460 PF00072 Response regulator receiver domain GOQ09_14460 PF00486 Transcriptional regulatory protein, C terminal GOQ09_14470 PF00899 ThiF family GOQ09_14480 PF00691 OmpA family GOQ09_14485 PF07676 WD40-like Beta Propeller Repeat GOQ09_14485 PF04052 TolB amino-terminal domain GOQ09_14490 PF00005 ABC transporter GOQ09_14490 PF00664 ABC transporter transmembrane region GOQ09_14495 PF00575 S1 RNA binding domain GOQ09_14495 PF10150 Ribonuclease E/G family GOQ09_14500 PF02545 Maf-like protein GOQ09_14505 PF02590 Predicted SPOUT methyltransferase GOQ09_14515 PF01467 Cytidylyltransferase-like GOQ09_14520 PF01218 Coproporphyrinogen III oxidase GOQ09_14525 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain GOQ09_14525 PF02844 Phosphoribosylglycinamide synthetase, N domain GOQ09_14525 PF02843 Phosphoribosylglycinamide synthetase, C domain GOQ09_14530 PF01709 Transcriptional regulator GOQ09_14535 PF01209 ubiE/COQ5 methyltransferase family GOQ09_14590 PF07977 FabA-like domain GOQ09_14605 PF05872 Bacterial protein of unknown function (DUF853) GOQ09_14610 PF06532 Negative regulator of sigma F GOQ09_14615 PF08281 Sigma-70, region 4 GOQ09_14615 PF04542 Sigma-70 region 2 GOQ09_14645 PF02608 ABC transporter substrate-binding protein PnrA-like GOQ09_14650 PF01048 Phosphorylase superfamily GOQ09_14680 PF07969 Amidohydrolase family GOQ09_14695 PF00929 Exonuclease GOQ09_14695 PF08411 Exonuclease C-terminal GOQ09_14700 PF13091 PLD-like domain GOQ09_14700 PF13396 Phospholipase_D-nuclease N-terminal GOQ09_14705 PF00004 ATPase family associated with various cellular activities (AAA) GOQ09_14705 PF07724 AAA domain (Cdc48 subfamily) GOQ09_14705 PF17871 AAA lid domain GOQ09_14705 PF02861 Clp amino terminal domain, pathogenicity island component GOQ09_14705 PF10431 C-terminal, D2-small domain, of ClpB protein GOQ09_14710 PF02617 ATP-dependent Clp protease adaptor protein ClpS GOQ09_14715 PF00180 Isocitrate/isopropylmalate dehydrogenase GOQ09_14735 PF02777 Iron/manganese superoxide dismutases, C-terminal domain GOQ09_14735 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain GOQ09_14740 PF02601 Exonuclease VII, large subunit GOQ09_14740 PF13742 OB-fold nucleic acid binding domain GOQ09_14745 PF01618 MotA/TolQ/ExbB proton channel family GOQ09_14750 PF02472 Biopolymer transport protein ExbD/TolR GOQ09_14755 PF02606 Tetraacyldisaccharide-1-P 4'-kinase GOQ09_14760 PF03966 Trm112p-like protein GOQ09_14765 PF02348 Cytidylyltransferase GOQ09_14770 PF05191 Adenylate kinase, active site lid GOQ09_14775 PF00710 Asparaginase, N-terminal GOQ09_14775 PF17763 Glutaminase/Asparaginase C-terminal domain GOQ09_14780 PF01726 LexA DNA binding domain GOQ09_14780 PF00717 Peptidase S24-like GOQ09_14790 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GOQ09_14790 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GOQ09_14795 PF07690 Major Facilitator Superfamily GOQ09_14800 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain GOQ09_14800 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GOQ09_14800 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain GOQ09_14805 PF00378 Enoyl-CoA hydratase/isomerase GOQ09_14810 PF00027 Cyclic nucleotide-binding domain GOQ09_14810 PF13545 Crp-like helix-turn-helix domain GOQ09_14820 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GOQ09_14820 PF02770 Acyl-CoA dehydrogenase, middle domain GOQ09_14820 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GOQ09_14830 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III GOQ09_14830 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain GOQ09_14830 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II GOQ09_14830 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I GOQ09_14835 PF00809 Pterin binding enzyme GOQ09_14840 PF01434 Peptidase family M41 GOQ09_14840 PF17862 AAA+ lid domain GOQ09_14840 PF06480 FtsH Extracellular GOQ09_14840 PF00004 ATPase family associated with various cellular activities (AAA) GOQ09_14845 PF01728 FtsJ-like methyltransferase GOQ09_14850 PF01985 CRS1 / YhbY (CRM) domain GOQ09_14865 PF01272 Transcription elongation factor, GreA/GreB, C-term GOQ09_14865 PF03449 Transcription elongation factor, N-terminal GOQ09_14875 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GOQ09_14875 PF02142 MGS-like domain GOQ09_14875 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain GOQ09_14885 PF00117 Glutamine amidotransferase class-I GOQ09_14885 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain GOQ09_14890 PF00588 SpoU rRNA Methylase family GOQ09_14890 PF08032 RNA 2'-O ribose methyltransferase substrate binding GOQ09_14895 PF01351 Ribonuclease HII GOQ09_14900 PF02684 Lipid-A-disaccharide synthetase GOQ09_14905 PF00132 Bacterial transferase hexapeptide (six repeats) GOQ09_14905 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 GOQ09_14910 PF07977 FabA-like domain GOQ09_14915 PF14602 Hexapeptide repeat of succinyl-transferase GOQ09_14915 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD GOQ09_14915 PF00132 Bacterial transferase hexapeptide (six repeats) GOQ09_14925 PF07244 Surface antigen variable number repeat GOQ09_14925 PF01103 Surface antigen GOQ09_14930 PF02163 Peptidase family M50 GOQ09_14930 PF17820 PDZ domain GOQ09_14935 PF13288 DXP reductoisomerase C-terminal domain GOQ09_14935 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase GOQ09_14935 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain GOQ09_14945 PF01255 Putative undecaprenyl diphosphate synthase GOQ09_14950 PF01765 Ribosome recycling factor GOQ09_14955 PF00696 Amino acid kinase family GOQ09_14960 PF00889 Elongation factor TS GOQ09_14965 PF00318 Ribosomal protein S2 GOQ09_14970 PF01425 Amidase GOQ09_14975 PF01266 FAD dependent oxidoreductase GOQ09_14980 PF03853 YjeF-related protein N-terminus GOQ09_14980 PF01256 Carbohydrate kinase GOQ09_14990 PF17876 Cold shock domain GOQ09_14990 PF08461 Ribonuclease R winged-helix domain GOQ09_14990 PF08206 Ribonuclease B OB domain GOQ09_14990 PF00773 RNB domain GOQ09_14990 PF00575 S1 RNA binding domain GOQ09_15010 PF18693 TRAM domain GOQ09_15010 PF04055 Radical SAM superfamily GOQ09_15010 PF00919 Uncharacterized protein family UPF0004 GOQ09_15015 PF07879 PHB/PHA accumulation regulator DNA-binding domain GOQ09_15015 PF05233 PHB accumulation regulatory domain GOQ09_15030 PF02824 TGS domain GOQ09_15030 PF04607 Region found in RelA / SpoT proteins GOQ09_15030 PF13291 ACT domain GOQ09_15040 PF00106 short chain dehydrogenase GOQ09_15055 PF00072 Response regulator receiver domain GOQ09_15055 PF00486 Transcriptional regulatory protein, C terminal GOQ09_15060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GOQ09_15060 PF00672 HAMP domain GOQ09_15060 PF00512 His Kinase A (phospho-acceptor) domain GOQ09_15065 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GOQ09_15065 PF02542 YgbB family GOQ09_15070 PF02542 YgbB family GOQ09_15070 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GOQ09_15075 PF00271 Helicase conserved C-terminal domain GOQ09_15075 PF00270 DEAD/DEAH box helicase GOQ09_15075 PF17757 UvrB interaction domain GOQ09_15075 PF02559 CarD-like/TRCF domain GOQ09_15075 PF03461 TRCF domain GOQ09_15100 PF00155 Aminotransferase class I and II GOQ09_15105 PF00633 Helix-hairpin-helix motif GOQ09_15105 PF10576 Iron-sulfur binding domain of endonuclease III GOQ09_15105 PF00730 HhH-GPD superfamily base excision DNA repair protein GOQ09_15125 PF02654 Cobalamin-5-phosphate synthase GOQ09_15130 PF02277 Phosphoribosyltransferase GOQ09_15135 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain GOQ09_15135 PF07685 CobB/CobQ-like glutamine amidotransferase domain GOQ09_15140 PF02321 Outer membrane efflux protein GOQ09_15145 PF00873 AcrB/AcrD/AcrF family GOQ09_15150 PF00529 HlyD membrane-fusion protein of T1SS GOQ09_15150 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GOQ09_15155 PF07859 alpha/beta hydrolase fold GOQ09_15160 PF03466 LysR substrate binding domain GOQ09_15160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_15170 PF04172 LrgB-like family GOQ09_15175 PF03788 LrgA family GOQ09_15180 PF00155 Aminotransferase class I and II GOQ09_15185 PF03186 CobD/Cbib protein GOQ09_15190 PF12557 Cob(I)alamin adenosyltransferase N terminal GOQ09_15190 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP GOQ09_15195 PF00005 ABC transporter GOQ09_15200 PF01032 FecCD transport family GOQ09_15210 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase GOQ09_15215 PF00593 TonB dependent receptor GOQ09_15215 PF07715 TonB-dependent Receptor Plug Domain GOQ09_15230 PF01925 Sulfite exporter TauE/SafE GOQ09_15240 PF14525 AraC-binding-like domain GOQ09_15245 PF00795 Carbon-nitrogen hydrolase GOQ09_15250 PF13816 Haem-containing dehydratase GOQ09_15260 PF13193 AMP-binding enzyme C-terminal domain GOQ09_15260 PF00501 AMP-binding enzyme GOQ09_15265 PF00378 Enoyl-CoA hydratase/isomerase GOQ09_15270 PF03401 Tripartite tricarboxylate transporter family receptor GOQ09_15280 PF00392 Bacterial regulatory proteins, gntR family GOQ09_15280 PF07729 FCD domain GOQ09_15285 PF01790 Prolipoprotein diacylglyceryl transferase GOQ09_15300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_15300 PF03466 LysR substrate binding domain GOQ09_15305 PF03466 LysR substrate binding domain GOQ09_15305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_15310 PF00920 Dehydratase family GOQ09_15325 PF00034 Cytochrome c GOQ09_15335 PF16177 Acetyl-coenzyme A synthetase N-terminus GOQ09_15335 PF13193 AMP-binding enzyme C-terminal domain GOQ09_15335 PF00501 AMP-binding enzyme GOQ09_15340 PF03350 Uncharacterized protein family, UPF0114 GOQ09_15345 PF03466 LysR substrate binding domain GOQ09_15345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_15350 PF13460 NAD(P)H-binding GOQ09_15355 PF00206 Lyase GOQ09_15355 PF10415 Fumarase C C-terminus GOQ09_15360 PF00005 ABC transporter GOQ09_15360 PF00571 CBS domain GOQ09_15365 PF00528 Binding-protein-dependent transport system inner membrane component GOQ09_15370 PF04069 Substrate binding domain of ABC-type glycine betaine transport system GOQ09_15380 PF01177 Asp/Glu/Hydantoin racemase GOQ09_15415 PF05362 Lon protease (S16) C-terminal proteolytic domain GOQ09_15415 PF02190 ATP-dependent protease La (LON) substrate-binding domain GOQ09_15415 PF00004 ATPase family associated with various cellular activities (AAA) GOQ09_15420 PF07724 AAA domain (Cdc48 subfamily) GOQ09_15420 PF10431 C-terminal, D2-small domain, of ClpB protein GOQ09_15420 PF06689 ClpX C4-type zinc finger GOQ09_15425 PF00574 Clp protease GOQ09_15430 PF05698 Bacterial trigger factor protein (TF) C-terminus GOQ09_15430 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GOQ09_15430 PF05697 Bacterial trigger factor protein (TF) GOQ09_15440 PF00873 AcrB/AcrD/AcrF family GOQ09_15445 PF13533 Biotin-lipoyl like GOQ09_15465 PF01593 Flavin containing amine oxidoreductase GOQ09_15480 PF13419 Haloacid dehalogenase-like hydrolase GOQ09_15485 PF00762 Ferrochelatase GOQ09_15510 PF00005 ABC transporter GOQ09_15515 PF00005 ABC transporter GOQ09_15515 PF12399 Branched-chain amino acid ATP-binding cassette transporter GOQ09_15530 PF00012 Hsp70 protein GOQ09_15540 PF00072 Response regulator receiver domain GOQ09_15540 PF02954 Bacterial regulatory protein, Fis family GOQ09_15540 PF00158 Sigma-54 interaction domain GOQ09_15550 PF02321 Outer membrane efflux protein GOQ09_15560 PF00873 AcrB/AcrD/AcrF family GOQ09_15565 PF01970 Tripartite tricarboxylate transporter TctA family GOQ09_15575 PF03401 Tripartite tricarboxylate transporter family receptor GOQ09_15580 PF00486 Transcriptional regulatory protein, C terminal GOQ09_15580 PF00072 Response regulator receiver domain GOQ09_15585 PF00512 His Kinase A (phospho-acceptor) domain GOQ09_15585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GOQ09_15585 PF08521 Two-component sensor kinase N-terminal GOQ09_15590 PF01479 S4 domain GOQ09_15595 PF03976 Polyphosphate kinase 2 (PPK2) GOQ09_15610 PF07963 Prokaryotic N-terminal methylation motif GOQ09_15610 PF00114 Pilin (bacterial filament) GOQ09_15735 PF00574 Clp protease GOQ09_15755 PF02413 Caudovirales tail fibre assembly protein, lambda gpK GOQ09_15845 PF00145 C-5 cytosine-specific DNA methylase GOQ09_15875 PF00589 Phage integrase family GOQ09_15875 PF13356 Arm DNA-binding domain GOQ09_15885 PF01842 ACT domain GOQ09_15885 PF13840 ACT domain GOQ09_15885 PF00696 Amino acid kinase family GOQ09_15890 PF01171 PP-loop family GOQ09_15890 PF09179 TilS substrate binding domain GOQ09_15895 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit GOQ09_15900 PF02805 Metal binding domain of Ada GOQ09_15900 PF00730 HhH-GPD superfamily base excision DNA repair protein GOQ09_15900 PF12833 Helix-turn-helix domain GOQ09_15900 PF06029 AlkA N-terminal domain GOQ09_15905 PF09190 DALR domain GOQ09_15905 PF01406 tRNA synthetases class I (C) catalytic domain GOQ09_15915 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD GOQ09_15920 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD GOQ09_15925 PF00149 Calcineurin-like phosphoesterase GOQ09_15930 PF06167 Glucose-regulated metallo-peptidase M90 GOQ09_15950 PF01464 Transglycosylase SLT domain GOQ09_15950 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain GOQ09_15955 PF00464 Serine hydroxymethyltransferase GOQ09_15960 PF03477 ATP cone domain GOQ09_15965 PF00114 Pilin (bacterial filament) GOQ09_15965 PF07963 Prokaryotic N-terminal methylation motif GOQ09_15975 PF05567 Neisseria PilC beta-propeller domain GOQ09_15995 PF01872 RibD C-terminal domain GOQ09_15995 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region GOQ09_16000 PF00677 Lumazine binding domain GOQ09_16005 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase GOQ09_16005 PF00925 GTP cyclohydrolase II GOQ09_16010 PF00885 6,7-dimethyl-8-ribityllumazine synthase GOQ09_16015 PF01029 NusB family GOQ09_16020 PF00155 Aminotransferase class I and II GOQ09_16025 PF03061 Thioesterase superfamily GOQ09_16030 PF01618 MotA/TolQ/ExbB proton channel family GOQ09_16035 PF02472 Biopolymer transport protein ExbD/TolR GOQ09_16050 PF01336 OB-fold nucleic acid binding domain GOQ09_16050 PF02811 PHP domain GOQ09_16050 PF07733 Bacterial DNA polymerase III alpha NTPase domain GOQ09_16050 PF17657 Bacterial DNA polymerase III alpha subunit finger domain GOQ09_16050 PF14579 Helix-hairpin-helix motif GOQ09_16060 PF02678 Pirin GOQ09_16060 PF05726 Pirin C-terminal cupin domain GOQ09_16065 PF03358 NADPH-dependent FMN reductase GOQ09_16070 PF07681 DoxX GOQ09_16075 PF02678 Pirin GOQ09_16075 PF17954 Quercetinase C-terminal cupin domain GOQ09_16085 PF05430 S-adenosyl-L-methionine-dependent methyltransferase GOQ09_16085 PF01266 FAD dependent oxidoreductase GOQ09_16090 PF00749 tRNA synthetases class I (E and Q), catalytic domain GOQ09_16095 PF02390 Putative methyltransferase GOQ09_16110 PF00027 Cyclic nucleotide-binding domain GOQ09_16110 PF13545 Crp-like helix-turn-helix domain GOQ09_16120 PF00596 Class II Aldolase and Adducin N-terminal domain GOQ09_16125 PF01758 Sodium Bile acid symporter family GOQ09_16130 PF03466 LysR substrate binding domain GOQ09_16130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_16135 PF04205 FMN-binding domain GOQ09_16135 PF00890 FAD binding domain GOQ09_16145 PF00596 Class II Aldolase and Adducin N-terminal domain GOQ09_16150 PF03401 Tripartite tricarboxylate transporter family receptor GOQ09_16155 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GOQ09_16155 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GOQ09_16155 PF01842 ACT domain GOQ09_16160 PF14310 Fibronectin type III-like domain GOQ09_16160 PF00933 Glycosyl hydrolase family 3 N terminal domain GOQ09_16160 PF01915 Glycosyl hydrolase family 3 C-terminal domain GOQ09_16170 PF03401 Tripartite tricarboxylate transporter family receptor GOQ09_16175 PF01070 FMN-dependent dehydrogenase GOQ09_16185 PF03069 Acetamidase/Formamidase family GOQ09_16190 PF00005 ABC transporter GOQ09_16195 PF00005 ABC transporter GOQ09_16195 PF08402 TOBE domain GOQ09_16215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GOQ09_16215 PF00512 His Kinase A (phospho-acceptor) domain GOQ09_16215 PF01627 Hpt domain GOQ09_16215 PF00072 Response regulator receiver domain GOQ09_16220 PF00072 Response regulator receiver domain GOQ09_16240 PF01433 Peptidase family M1 domain GOQ09_16240 PF11838 ERAP1-like C-terminal domain GOQ09_16255 PF01411 tRNA synthetases class II (A) GOQ09_16255 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain GOQ09_16255 PF02272 DHHA1 domain GOQ09_16300 PF02770 Acyl-CoA dehydrogenase, middle domain GOQ09_16300 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GOQ09_16300 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GOQ09_16315 PF00202 Aminotransferase class-III GOQ09_16315 PF00501 AMP-binding enzyme GOQ09_16315 PF13193 AMP-binding enzyme C-terminal domain GOQ09_16315 PF00668 Condensation domain GOQ09_16315 PF00109 Beta-ketoacyl synthase, N-terminal domain GOQ09_16315 PF02801 Beta-ketoacyl synthase, C-terminal domain GOQ09_16315 PF00550 Phosphopantetheine attachment site GOQ09_16315 PF16197 Ketoacyl-synthetase C-terminal extension GOQ09_16320 PF13193 AMP-binding enzyme C-terminal domain GOQ09_16320 PF00975 Thioesterase domain GOQ09_16320 PF00550 Phosphopantetheine attachment site GOQ09_16320 PF00668 Condensation domain GOQ09_16320 PF00501 AMP-binding enzyme GOQ09_16340 PF02563 Polysaccharide biosynthesis/export protein GOQ09_16340 PF10531 SLBB domain GOQ09_16345 PF13614 AAA domain GOQ09_16345 PF02706 Chain length determinant protein GOQ09_16345 PF13807 G-rich domain on putative tyrosine kinase GOQ09_16350 PF02397 Bacterial sugar transferase GOQ09_16355 PF01370 NAD dependent epimerase/dehydratase family GOQ09_16385 PF00534 Glycosyl transferases group 1 GOQ09_16385 PF13579 Glycosyl transferase 4-like domain GOQ09_16390 PF00196 Bacterial regulatory proteins, luxR family GOQ09_16390 PF00072 Response regulator receiver domain GOQ09_16395 PF00483 Nucleotidyl transferase GOQ09_16395 PF01050 Mannose-6-phosphate isomerase GOQ09_16420 PF02811 PHP domain GOQ09_16420 PF14579 Helix-hairpin-helix motif GOQ09_16420 PF17657 Bacterial DNA polymerase III alpha subunit finger domain GOQ09_16420 PF07733 Bacterial DNA polymerase III alpha NTPase domain GOQ09_16445 PF03401 Tripartite tricarboxylate transporter family receptor GOQ09_16450 PF13609 Gram-negative porin GOQ09_16480 PF03401 Tripartite tricarboxylate transporter family receptor GOQ09_16485 PF03401 Tripartite tricarboxylate transporter family receptor GOQ09_16490 PF00561 alpha/beta hydrolase fold GOQ09_16495 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase GOQ09_16505 PF00072 Response regulator receiver domain GOQ09_16505 PF00196 Bacterial regulatory proteins, luxR family GOQ09_16520 PF00664 ABC transporter transmembrane region GOQ09_16520 PF00005 ABC transporter GOQ09_16530 PF17932 Tetracyclin repressor-like, C-terminal domain GOQ09_16530 PF00440 Bacterial regulatory proteins, tetR family GOQ09_16540 PF01926 50S ribosome-binding GTPase GOQ09_16540 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal GOQ09_16550 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase GOQ09_16550 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain GOQ09_16555 PF03450 CO dehydrogenase flavoprotein C-terminal domain GOQ09_16555 PF00941 FAD binding domain in molybdopterin dehydrogenase GOQ09_16560 PF10518 TAT (twin-arginine translocation) pathway signal sequence GOQ09_16560 PF01799 [2Fe-2S] binding domain GOQ09_16560 PF00111 2Fe-2S iron-sulfur cluster binding domain GOQ09_16570 PF03466 LysR substrate binding domain GOQ09_16570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_16575 PF03006 Haemolysin-III related GOQ09_16585 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) GOQ09_16595 PF01022 Bacterial regulatory protein, arsR family GOQ09_16605 PF01066 CDP-alcohol phosphatidyltransferase GOQ09_16610 PF02798 Glutathione S-transferase, N-terminal domain GOQ09_16610 PF00043 Glutathione S-transferase, C-terminal domain GOQ09_16615 PF00300 Histidine phosphatase superfamily (branch 1) GOQ09_16615 PF00106 short chain dehydrogenase GOQ09_16620 PF01556 DnaJ C terminal domain GOQ09_16620 PF00226 DnaJ domain GOQ09_16635 PF00691 OmpA family GOQ09_16635 PF13677 Membrane MotB of proton-channel complex MotA/MotB GOQ09_16660 PF03972 MmgE/PrpD family GOQ09_16665 PF00285 Citrate synthase, C-terminal domain GOQ09_16675 PF09856 Predicted transcriptional regulator (DUF2083) GOQ09_16675 PF06114 IrrE N-terminal-like domain GOQ09_16675 PF01381 Helix-turn-helix GOQ09_16685 PF08267 Cobalamin-independent synthase, N-terminal domain GOQ09_16685 PF01717 Cobalamin-independent synthase, Catalytic domain GOQ09_16690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_16690 PF03466 LysR substrate binding domain GOQ09_16695 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase GOQ09_16695 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase GOQ09_16700 PF00378 Enoyl-CoA hydratase/isomerase GOQ09_16715 PF00171 Aldehyde dehydrogenase family GOQ09_16720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_16720 PF03466 LysR substrate binding domain GOQ09_16725 PF01144 Coenzyme A transferase GOQ09_16730 PF01144 Coenzyme A transferase GOQ09_16735 PF00072 Response regulator receiver domain GOQ09_16735 PF00196 Bacterial regulatory proteins, luxR family GOQ09_16740 PF03401 Tripartite tricarboxylate transporter family receptor GOQ09_16745 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GOQ09_16750 PF00682 HMGL-like GOQ09_16755 PF02515 CoA-transferase family III GOQ09_16760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_16760 PF03466 LysR substrate binding domain GOQ09_16765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_16765 PF03466 LysR substrate binding domain GOQ09_16770 PF00171 Aldehyde dehydrogenase family GOQ09_16780 PF04349 Periplasmic glucan biosynthesis protein, MdoG GOQ09_16785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_16785 PF03466 LysR substrate binding domain GOQ09_16795 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase GOQ09_16795 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GOQ09_16800 PF13520 Amino acid permease GOQ09_16805 PF06751 Ethanolamine ammonia lyase large subunit (EutB) GOQ09_16810 PF05985 Ethanolamine ammonia-lyase light chain (EutC) GOQ09_16825 PF08019 Phosphoethanolamine transferase EptA/EptB GOQ09_16825 PF00884 Sulfatase GOQ09_16840 PF00072 Response regulator receiver domain GOQ09_16840 PF00486 Transcriptional regulatory protein, C terminal GOQ09_16845 PF00512 His Kinase A (phospho-acceptor) domain GOQ09_16845 PF08521 Two-component sensor kinase N-terminal GOQ09_16845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GOQ09_16850 PF03061 Thioesterase superfamily GOQ09_16870 PF01968 Hydantoinase/oxoprolinase GOQ09_16870 PF05378 Hydantoinase/oxoprolinase N-terminal region GOQ09_16880 PF07286 Protein of unknown function (DUF1445) GOQ09_16885 PF03466 LysR substrate binding domain GOQ09_16885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_16890 PF01370 NAD dependent epimerase/dehydratase family GOQ09_16895 PF03480 Bacterial extracellular solute-binding protein, family 7 GOQ09_16905 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component GOQ09_16915 PF08669 Glycine cleavage T-protein C-terminal barrel domain GOQ09_16915 PF01571 Aminomethyltransferase folate-binding domain GOQ09_16920 PF01597 Glycine cleavage H-protein GOQ09_16925 PF02347 Glycine cleavage system P-protein GOQ09_16945 PF03060 Nitronate monooxygenase GOQ09_16950 PF00990 Diguanylate cyclase, GGDEF domain GOQ09_16960 PF00535 Glycosyl transferase family 2 GOQ09_16970 PF00072 Response regulator receiver domain GOQ09_16970 PF00196 Bacterial regulatory proteins, luxR family GOQ09_16980 PF14765 Polyketide synthase dehydratase GOQ09_16980 PF00550 Phosphopantetheine attachment site GOQ09_16980 PF08659 KR domain GOQ09_16980 PF02801 Beta-ketoacyl synthase, C-terminal domain GOQ09_16980 PF08990 Erythronolide synthase docking GOQ09_16980 PF00109 Beta-ketoacyl synthase, N-terminal domain GOQ09_16980 PF16197 Ketoacyl-synthetase C-terminal extension GOQ09_16980 PF09277 Erythronolide synthase, docking GOQ09_16980 PF00698 Acyl transferase domain GOQ09_16980 PF08240 Alcohol dehydrogenase GroES-like domain GOQ09_16985 PF03466 LysR substrate binding domain GOQ09_16985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_16995 PF02525 Flavodoxin-like fold GOQ09_17005 PF01042 Endoribonuclease L-PSP GOQ09_17010 PF03466 LysR substrate binding domain GOQ09_17010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_17020 PF07690 Major Facilitator Superfamily GOQ09_17020 PF00083 Sugar (and other) transporter GOQ09_17025 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GOQ09_17030 PF00561 alpha/beta hydrolase fold GOQ09_17035 PF07690 Major Facilitator Superfamily GOQ09_17045 PF10397 Adenylosuccinate lyase C-terminus GOQ09_17045 PF00206 Lyase GOQ09_17050 PF01970 Tripartite tricarboxylate transporter TctA family GOQ09_17065 PF18317 Shikimate 5'-dehydrogenase C-terminal domain GOQ09_17065 PF01488 Shikimate / quinate 5-dehydrogenase GOQ09_17065 PF08501 Shikimate dehydrogenase substrate binding domain GOQ09_17070 PF18317 Shikimate 5'-dehydrogenase C-terminal domain GOQ09_17070 PF01488 Shikimate / quinate 5-dehydrogenase GOQ09_17070 PF08501 Shikimate dehydrogenase substrate binding domain GOQ09_17075 PF01614 Bacterial transcriptional regulator GOQ09_17075 PF09339 IclR helix-turn-helix domain GOQ09_17080 PF03401 Tripartite tricarboxylate transporter family receptor GOQ09_17100 PF00005 ABC transporter GOQ09_17105 PF02653 Branched-chain amino acid transport system / permease component GOQ09_17110 PF13407 Periplasmic binding protein domain GOQ09_17140 PF04717 Type VI secretion system, phage-baseplate injector GOQ09_17150 PF01264 Chorismate synthase GOQ09_17155 PF02534 Type IV secretory system Conjugative DNA transfer GOQ09_17195 PF07690 Major Facilitator Superfamily GOQ09_17205 PF01022 Bacterial regulatory protein, arsR family GOQ09_17225 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GOQ09_17225 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GOQ09_17225 PF02770 Acyl-CoA dehydrogenase, middle domain GOQ09_17225 PF12806 Acetyl-CoA dehydrogenase C-terminal like GOQ09_17230 PF00766 Electron transfer flavoprotein FAD-binding domain GOQ09_17230 PF01012 Electron transfer flavoprotein domain GOQ09_17235 PF01012 Electron transfer flavoprotein domain GOQ09_17240 PF12794 Mechanosensitive ion channel inner membrane domain 1 GOQ09_17240 PF00924 Mechanosensitive ion channel GOQ09_17240 PF12795 Mechanosensitive ion channel porin domain GOQ09_17245 PF00850 Histone deacetylase domain GOQ09_17250 PF07726 ATPase family associated with various cellular activities (AAA) GOQ09_17250 PF17863 AAA lid domain GOQ09_17260 PF01841 Transglutaminase-like superfamily GOQ09_17260 PF11992 Domain of unknown function (DUF3488) GOQ09_17260 PF13559 Domain of unknown function (DUF4129) GOQ09_17265 PF13406 Transglycosylase SLT domain GOQ09_17280 PF00109 Beta-ketoacyl synthase, N-terminal domain GOQ09_17280 PF02801 Beta-ketoacyl synthase, C-terminal domain GOQ09_17295 PF00005 ABC transporter GOQ09_17330 PF00528 Binding-protein-dependent transport system inner membrane component GOQ09_17335 PF00528 Binding-protein-dependent transport system inner membrane component GOQ09_17340 PF00005 ABC transporter GOQ09_17340 PF17912 MalK OB fold domain GOQ09_17345 PF17912 MalK OB fold domain GOQ09_17345 PF00005 ABC transporter GOQ09_17350 PF01266 FAD dependent oxidoreductase GOQ09_17350 PF16901 C-terminal domain of alpha-glycerophosphate oxidase GOQ09_17355 PF08220 DeoR-like helix-turn-helix domain GOQ09_17355 PF00455 DeoR C terminal sensor domain GOQ09_17360 PF02782 FGGY family of carbohydrate kinases, C-terminal domain GOQ09_17360 PF00370 FGGY family of carbohydrate kinases, N-terminal domain GOQ09_17375 PF14403 Circularly permuted ATP-grasp type 2 GOQ09_17380 PF03772 Competence protein GOQ09_17380 PF00753 Metallo-beta-lactamase superfamily GOQ09_17390 PF04168 A predicted alpha-helical domain with a conserved ER motif. GOQ09_17390 PF14403 Circularly permuted ATP-grasp type 2 GOQ09_17395 PF00497 Bacterial extracellular solute-binding proteins, family 3 GOQ09_17400 PF01841 Transglutaminase-like superfamily GOQ09_17400 PF08379 Bacterial transglutaminase-like N-terminal region GOQ09_17415 PF00356 Bacterial regulatory proteins, lacI family GOQ09_17420 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GOQ09_17420 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GOQ09_17425 PF00294 pfkB family carbohydrate kinase GOQ09_17435 PF00005 ABC transporter GOQ09_17445 PF00528 Binding-protein-dependent transport system inner membrane component GOQ09_17450 PF00528 Binding-protein-dependent transport system inner membrane component GOQ09_17465 PF00857 Isochorismatase family GOQ09_17475 PF12706 Beta-lactamase superfamily domain GOQ09_17485 PF00521 DNA gyrase/topoisomerase IV, subunit A GOQ09_17495 PF01464 Transglycosylase SLT domain GOQ09_17495 PF10145 Phage-related minor tail protein GOQ09_17495 PF01551 Peptidase family M23 GOQ09_17500 PF00986 DNA gyrase B subunit, carboxyl terminus GOQ09_17500 PF00204 DNA gyrase B GOQ09_17500 PF01751 Toprim domain GOQ09_17500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GOQ09_17520 PF00701 Dihydrodipicolinate synthetase family GOQ09_17525 PF06804 NlpB/DapX lipoprotein GOQ09_17530 PF00753 Metallo-beta-lactamase superfamily GOQ09_17545 PF08007 Cupin superfamily protein GOQ09_17550 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GOQ09_17560 PF00692 dUTPase GOQ09_17570 PF02441 Flavoprotein GOQ09_17570 PF04127 DNA / pantothenate metabolism flavoprotein GOQ09_17575 PF00117 Glutamine amidotransferase class-I GOQ09_17575 PF06418 CTP synthase N-terminus GOQ09_17580 PF00793 DAHP synthetase I family GOQ09_17590 PF00113 Enolase, C-terminal TIM barrel domain GOQ09_17590 PF03952 Enolase, N-terminal domain GOQ09_17595 PF04977 Septum formation initiator GOQ09_17600 PF04973 Nicotinamide mononucleotide transporter GOQ09_17630 PF01430 Hsp33 protein GOQ09_17635 PF00132 Bacterial transferase hexapeptide (six repeats) GOQ09_17640 PF04305 Protein of unknown function (DUF455) GOQ09_17650 PF00108 Thiolase, N-terminal domain GOQ09_17650 PF02803 Thiolase, C-terminal domain GOQ09_17660 PF03401 Tripartite tricarboxylate transporter family receptor GOQ09_17665 PF03401 Tripartite tricarboxylate transporter family receptor GOQ09_17675 PF00589 Phage integrase family GOQ09_17675 PF02899 Phage integrase, N-terminal SAM-like domain GOQ09_17680 PF03401 Tripartite tricarboxylate transporter family receptor GOQ09_17690 PF08331 Domain of unknown function (DUF1730) GOQ09_17695 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE GOQ09_17700 PF11741 AMIN domain GOQ09_17700 PF01520 N-acetylmuramoyl-L-alanine amidase GOQ09_17710 PF09335 SNARE associated Golgi protein GOQ09_17715 PF08676 MutL C terminal dimerisation domain GOQ09_17715 PF01119 DNA mismatch repair protein, C-terminal domain GOQ09_17730 PF00005 ABC transporter GOQ09_17735 PF00291 Pyridoxal-phosphate dependent enzyme GOQ09_17740 PF07729 FCD domain GOQ09_17740 PF00392 Bacterial regulatory proteins, gntR family GOQ09_17745 PF05721 Phytanoyl-CoA dioxygenase (PhyH) GOQ09_17765 PF01804 Penicillin amidase GOQ09_17785 PF00149 Calcineurin-like phosphoesterase GOQ09_17795 PF02653 Branched-chain amino acid transport system / permease component GOQ09_17805 PF00005 ABC transporter GOQ09_17810 PF00005 ABC transporter GOQ09_17810 PF12399 Branched-chain amino acid ATP-binding cassette transporter GOQ09_17820 PF07690 Major Facilitator Superfamily GOQ09_17825 PF00529 HlyD membrane-fusion protein of T1SS GOQ09_17825 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GOQ09_17830 PF02321 Outer membrane efflux protein GOQ09_17835 PF01047 MarR family GOQ09_17840 PF00664 ABC transporter transmembrane region GOQ09_17840 PF00005 ABC transporter GOQ09_17850 PF00293 NUDIX domain GOQ09_17860 PF00361 Proton-conducting membrane transporter GOQ09_17865 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus GOQ09_17865 PF00361 Proton-conducting membrane transporter GOQ09_17870 PF00361 Proton-conducting membrane transporter GOQ09_17870 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus GOQ09_17875 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L GOQ09_17880 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 GOQ09_17885 PF12838 4Fe-4S dicluster domain GOQ09_17890 PF00146 NADH dehydrogenase GOQ09_17895 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal GOQ09_17895 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region GOQ09_17895 PF00384 Molybdopterin oxidoreductase GOQ09_17900 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region GOQ09_17900 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit GOQ09_17900 PF10531 SLBB domain GOQ09_17910 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit GOQ09_17915 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit GOQ09_17920 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit GOQ09_17925 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 GOQ09_17935 PF03840 Preprotein translocase SecG subunit GOQ09_17940 PF00121 Triosephosphate isomerase GOQ09_17945 PF16197 Ketoacyl-synthetase C-terminal extension GOQ09_17945 PF00107 Zinc-binding dehydrogenase GOQ09_17945 PF02801 Beta-ketoacyl synthase, C-terminal domain GOQ09_17945 PF08240 Alcohol dehydrogenase GroES-like domain GOQ09_17945 PF00550 Phosphopantetheine attachment site GOQ09_17945 PF08659 KR domain GOQ09_17945 PF00109 Beta-ketoacyl synthase, N-terminal domain GOQ09_17945 PF00698 Acyl transferase domain GOQ09_17945 PF14765 Polyketide synthase dehydratase GOQ09_17950 PF00575 S1 RNA binding domain GOQ09_17950 PF03725 3' exoribonuclease family, domain 2 GOQ09_17950 PF00013 KH domain GOQ09_17950 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain GOQ09_17950 PF01138 3' exoribonuclease family, domain 1 GOQ09_17955 PF00312 Ribosomal protein S15 GOQ09_17965 PF13458 Periplasmic binding protein GOQ09_17980 PF00814 Glycoprotease family GOQ09_17985 PF03861 ANTAR domain GOQ09_17985 PF08376 Nitrate and nitrite sensing GOQ09_17995 PF00528 Binding-protein-dependent transport system inner membrane component GOQ09_18000 PF00005 ABC transporter GOQ09_18005 PF03861 ANTAR domain GOQ09_18005 PF00072 Response regulator receiver domain GOQ09_18010 PF07690 Major Facilitator Superfamily GOQ09_18015 PF00069 Protein kinase domain GOQ09_18020 PF04324 BFD-like [2Fe-2S] binding domain GOQ09_18020 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain GOQ09_18020 PF07992 Pyridine nucleotide-disulphide oxidoreductase GOQ09_18020 PF01077 Nitrite and sulphite reductase 4Fe-4S domain GOQ09_18020 PF18267 Rubredoxin NAD+ reductase C-terminal domain GOQ09_18030 PF00355 Rieske [2Fe-2S] domain GOQ09_18035 PF04324 BFD-like [2Fe-2S] binding domain GOQ09_18035 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GOQ09_18035 PF00384 Molybdopterin oxidoreductase GOQ09_18035 PF01568 Molydopterin dinucleotide binding domain GOQ09_18040 PF02885 Glycosyl transferase family, helical bundle domain GOQ09_18040 PF00591 Glycosyl transferase family, a/b domain GOQ09_18045 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GOQ09_18050 PF00005 ABC transporter GOQ09_18050 PF08402 TOBE domain GOQ09_18060 PF00528 Binding-protein-dependent transport system inner membrane component GOQ09_18065 PF00528 Binding-protein-dependent transport system inner membrane component GOQ09_18075 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family GOQ09_18085 PF01165 Ribosomal protein S21 GOQ09_18090 PF09424 Yqey-like protein GOQ09_18095 PF00293 NUDIX domain GOQ09_18110 PF08240 Alcohol dehydrogenase GroES-like domain GOQ09_18110 PF00107 Zinc-binding dehydrogenase GOQ09_18115 PF03459 TOBE domain GOQ09_18115 PF00005 ABC transporter GOQ09_18115 PF17912 MalK OB fold domain GOQ09_18120 PF00528 Binding-protein-dependent transport system inner membrane component GOQ09_18125 PF00528 Binding-protein-dependent transport system inner membrane component GOQ09_18145 PF12833 Helix-turn-helix domain GOQ09_18145 PF02311 AraC-like ligand binding domain GOQ09_18150 PF01557 Fumarylacetoacetate (FAA) hydrolase family GOQ09_18155 PF01523 Putative modulator of DNA gyrase GOQ09_18160 PF04751 Protein of unknown function (DUF615) GOQ09_18165 PF00994 Probable molybdopterin binding domain GOQ09_18175 PF00486 Transcriptional regulatory protein, C terminal GOQ09_18175 PF00072 Response regulator receiver domain GOQ09_18180 PF00999 Sodium/hydrogen exchanger family GOQ09_18195 PF00403 Heavy-metal-associated domain GOQ09_18200 PF13411 MerR HTH family regulatory protein GOQ09_18210 PF00132 Bacterial transferase hexapeptide (six repeats) GOQ09_18215 PF00588 SpoU rRNA Methylase family GOQ09_18220 PF00459 Inositol monophosphatase family GOQ09_18225 PF12805 FUSC-like inner membrane protein yccS GOQ09_18235 PF04235 Protein of unknown function (DUF418) GOQ09_18245 PF03401 Tripartite tricarboxylate transporter family receptor GOQ09_18250 PF03401 Tripartite tricarboxylate transporter family receptor GOQ09_18255 PF00884 Sulfatase GOQ09_18260 PF07729 FCD domain GOQ09_18260 PF00392 Bacterial regulatory proteins, gntR family GOQ09_18270 PF02515 CoA-transferase family III GOQ09_18275 PF03401 Tripartite tricarboxylate transporter family receptor GOQ09_18295 PF03707 Bacterial signalling protein N terminal repeat GOQ09_18295 PF00990 Diguanylate cyclase, GGDEF domain GOQ09_18295 PF00563 EAL domain GOQ09_18310 PF04954 Siderophore-interacting protein GOQ09_18310 PF08021 Siderophore-interacting FAD-binding domain GOQ09_18315 PF01544 CorA-like Mg2+ transporter protein GOQ09_18325 PF05188 MutS domain II GOQ09_18325 PF00488 MutS domain V GOQ09_18325 PF05192 MutS domain III GOQ09_18325 PF01624 MutS domain I GOQ09_18325 PF05190 MutS family domain IV GOQ09_18340 PF00072 Response regulator receiver domain GOQ09_18340 PF00196 Bacterial regulatory proteins, luxR family GOQ09_18355 PF00158 Sigma-54 interaction domain GOQ09_18355 PF00072 Response regulator receiver domain GOQ09_18355 PF02954 Bacterial regulatory protein, Fis family GOQ09_18360 PF02673 Bacitracin resistance protein BacA GOQ09_18370 PF00497 Bacterial extracellular solute-binding proteins, family 3 GOQ09_18375 PF00202 Aminotransferase class-III GOQ09_18380 PF01380 SIS domain GOQ09_18380 PF01418 Helix-turn-helix domain, rpiR family GOQ09_18390 PF02321 Outer membrane efflux protein GOQ09_18395 PF00873 AcrB/AcrD/AcrF family GOQ09_18400 PF00873 AcrB/AcrD/AcrF family GOQ09_18405 PF13533 Biotin-lipoyl like GOQ09_18420 PF06580 Histidine kinase GOQ09_18420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GOQ09_18420 PF02743 Cache domain GOQ09_18420 PF00672 HAMP domain GOQ09_18425 PF04397 LytTr DNA-binding domain GOQ09_18425 PF00072 Response regulator receiver domain GOQ09_18435 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain GOQ09_18435 PF00749 tRNA synthetases class I (E and Q), catalytic domain GOQ09_18440 PF00849 RNA pseudouridylate synthase GOQ09_18445 PF01476 LysM domain GOQ09_18445 PF01551 Peptidase family M23 GOQ09_18455 PF00909 Ammonium Transporter Family GOQ09_18460 PF00072 Response regulator receiver domain GOQ09_18460 PF04397 LytTr DNA-binding domain GOQ09_18480 PF01926 50S ribosome-binding GTPase GOQ09_18490 PF00571 CBS domain GOQ09_18490 PF01380 SIS domain GOQ09_18500 PF13411 MerR HTH family regulatory protein GOQ09_18510 PF00106 short chain dehydrogenase GOQ09_18515 PF00072 Response regulator receiver domain GOQ09_18515 PF01339 CheB methylesterase GOQ09_18520 PF04262 Glutamate-cysteine ligase GOQ09_18525 PF02230 Phospholipase/Carboxylesterase GOQ09_18535 PF07683 Cobalamin synthesis protein cobW C-terminal domain GOQ09_18535 PF02492 CobW/HypB/UreG, nucleotide-binding domain GOQ09_18545 PF00378 Enoyl-CoA hydratase/isomerase GOQ09_18565 PF05661 Protein of unknown function (DUF808) GOQ09_18575 PF09905 DNA-binding protein VF530 GOQ09_18580 PF00111 2Fe-2S iron-sulfur cluster binding domain GOQ09_18590 PF00849 RNA pseudouridylate synthase GOQ09_18595 PF00582 Universal stress protein family GOQ09_18610 PF10017 Histidine-specific methyltransferase, SAM-dependent GOQ09_18615 PF03781 Sulfatase-modifying factor enzyme 1 GOQ09_18615 PF12867 DinB superfamily GOQ09_18620 PF07992 Pyridine nucleotide-disulphide oxidoreductase GOQ09_18630 PF00565 Staphylococcal nuclease homologue GOQ09_18635 PF13193 AMP-binding enzyme C-terminal domain GOQ09_18635 PF00501 AMP-binding enzyme GOQ09_18640 PF02566 OsmC-like protein GOQ09_18645 PF03401 Tripartite tricarboxylate transporter family receptor GOQ09_18655 PF01464 Transglycosylase SLT domain GOQ09_18655 PF00497 Bacterial extracellular solute-binding proteins, family 3 GOQ09_18660 PF00528 Binding-protein-dependent transport system inner membrane component GOQ09_18665 PF00528 Binding-protein-dependent transport system inner membrane component GOQ09_18670 PF00005 ABC transporter GOQ09_18685 PF03009 Glycerophosphoryl diester phosphodiesterase family GOQ09_18700 PF01266 FAD dependent oxidoreductase GOQ09_18705 PF03576 Peptidase family S58 GOQ09_18715 PF00005 ABC transporter GOQ09_18715 PF12848 ABC transporter GOQ09_18720 PF00270 DEAD/DEAH box helicase GOQ09_18720 PF00271 Helicase conserved C-terminal domain GOQ09_18735 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain GOQ09_18735 PF13378 Enolase C-terminal domain-like GOQ09_18740 PF03480 Bacterial extracellular solute-binding protein, family 7 GOQ09_18745 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component GOQ09_18750 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component GOQ09_18755 PF07729 FCD domain GOQ09_18755 PF00392 Bacterial regulatory proteins, gntR family GOQ09_18760 PF00920 Dehydratase family GOQ09_18770 PF01081 KDPG and KHG aldolase GOQ09_18775 PF00596 Class II Aldolase and Adducin N-terminal domain GOQ09_18810 PF13416 Bacterial extracellular solute-binding protein GOQ09_18820 PF00005 ABC transporter GOQ09_18820 PF08402 TOBE domain GOQ09_18830 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GOQ09_18840 PF01757 Acyltransferase family GOQ09_18850 PF01081 KDPG and KHG aldolase GOQ09_18855 PF00920 Dehydratase family GOQ09_18875 PF12804 MobA-like NTP transferase domain GOQ09_18875 PF00132 Bacterial transferase hexapeptide (six repeats) GOQ09_18875 PF14602 Hexapeptide repeat of succinyl-transferase GOQ09_18880 PF01243 Pyridoxamine 5'-phosphate oxidase GOQ09_18880 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region GOQ09_18895 PF03547 Membrane transport protein GOQ09_18900 PF00593 TonB dependent receptor GOQ09_18900 PF07715 TonB-dependent Receptor Plug Domain GOQ09_18910 PF01625 Peptide methionine sulfoxide reductase GOQ09_18915 PF00440 Bacterial regulatory proteins, tetR family GOQ09_18915 PF17922 Tetracyclin repressor-like, C-terminal domain GOQ09_18935 PF00534 Glycosyl transferases group 1 GOQ09_18935 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) GOQ09_18940 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain GOQ09_18940 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III GOQ09_18940 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II GOQ09_18940 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I GOQ09_18945 PF02805 Metal binding domain of Ada GOQ09_18945 PF12833 Helix-turn-helix domain GOQ09_18950 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain GOQ09_18950 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain GOQ09_18955 PF00892 EamA-like transporter family GOQ09_18975 PF02798 Glutathione S-transferase, N-terminal domain GOQ09_18995 PF00005 ABC transporter GOQ09_18995 PF00664 ABC transporter transmembrane region GOQ09_19005 PF00551 Formyl transferase GOQ09_19015 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) GOQ09_19045 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB GOQ09_19045 PF17287 POTRA domain GOQ09_19045 PF08479 POTRA domain, ShlB-type GOQ09_19060 PF00593 TonB dependent receptor GOQ09_19060 PF07715 TonB-dependent Receptor Plug Domain GOQ09_19065 PF00501 AMP-binding enzyme GOQ09_19065 PF13193 AMP-binding enzyme C-terminal domain GOQ09_19065 PF00668 Condensation domain GOQ09_19065 PF00550 Phosphopantetheine attachment site GOQ09_19070 PF00501 AMP-binding enzyme GOQ09_19070 PF00668 Condensation domain GOQ09_19070 PF00550 Phosphopantetheine attachment site GOQ09_19070 PF13193 AMP-binding enzyme C-terminal domain GOQ09_19075 PF00975 Thioesterase domain GOQ09_19075 PF00550 Phosphopantetheine attachment site GOQ09_19075 PF00668 Condensation domain GOQ09_19075 PF00501 AMP-binding enzyme GOQ09_19075 PF13193 AMP-binding enzyme C-terminal domain GOQ09_19080 PF16197 Ketoacyl-synthetase C-terminal extension GOQ09_19080 PF02801 Beta-ketoacyl synthase, C-terminal domain GOQ09_19080 PF00668 Condensation domain GOQ09_19080 PF00550 Phosphopantetheine attachment site GOQ09_19080 PF00109 Beta-ketoacyl synthase, N-terminal domain GOQ09_19080 PF00698 Acyl transferase domain GOQ09_19085 PF00550 Phosphopantetheine attachment site GOQ09_19085 PF00668 Condensation domain GOQ09_19085 PF13193 AMP-binding enzyme C-terminal domain GOQ09_19085 PF00501 AMP-binding enzyme GOQ09_19100 PF03621 MbtH-like protein GOQ09_19125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_19125 PF03466 LysR substrate binding domain GOQ09_19130 PF01168 Alanine racemase, N-terminal domain GOQ09_19130 PF14031 Putative serine dehydratase domain GOQ09_19145 PF01569 PAP2 superfamily GOQ09_19160 PF01965 DJ-1/PfpI family GOQ09_19180 PF00749 tRNA synthetases class I (E and Q), catalytic domain GOQ09_19185 PF01053 Cys/Met metabolism PLP-dependent enzyme GOQ09_19190 PF00156 Phosphoribosyl transferase domain GOQ09_19205 PF02875 Mur ligase family, glutamate ligase domain GOQ09_19205 PF08245 Mur ligase middle domain GOQ09_19210 PF03960 ArsC family GOQ09_19220 PF06865 Pyrimidine/purine nucleoside phosphorylase GOQ09_19225 PF00764 Arginosuccinate synthase GOQ09_19235 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain GOQ09_19235 PF01565 FAD binding domain GOQ09_19240 PF04461 Protein of unknown function (DUF520) GOQ09_19250 PF01042 Endoribonuclease L-PSP GOQ09_19255 PF02660 Glycerol-3-phosphate acyltransferase GOQ09_19260 PF04073 Aminoacyl-tRNA editing domain GOQ09_19265 PF00248 Aldo/keto reductase family GOQ09_19270 PF00561 alpha/beta hydrolase fold GOQ09_19285 PF03180 NLPA lipoprotein GOQ09_19290 PF00528 Binding-protein-dependent transport system inner membrane component GOQ09_19295 PF09383 NIL domain GOQ09_19295 PF00005 ABC transporter GOQ09_19300 PF03180 NLPA lipoprotein GOQ09_19310 PF13419 Haloacid dehalogenase-like hydrolase GOQ09_19315 PF01433 Peptidase family M1 domain GOQ09_19315 PF17432 Domain of unknown function (DUF3458_C) ARM repeats GOQ09_19315 PF11940 Domain of unknown function (DUF3458) Ig-like fold GOQ09_19325 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain GOQ09_19335 PF01844 HNH endonuclease GOQ09_19350 PF01515 Phosphate acetyl/butaryl transferase GOQ09_19360 PF08450 SMP-30/Gluconolactonase/LRE-like region GOQ09_19365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_19365 PF03466 LysR substrate binding domain GOQ09_19370 PF07690 Major Facilitator Superfamily GOQ09_19375 PF00871 Acetokinase family GOQ09_19380 PF03466 LysR substrate binding domain GOQ09_19380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_19385 PF00701 Dihydrodipicolinate synthetase family GOQ09_19390 PF03401 Tripartite tricarboxylate transporter family receptor GOQ09_19400 PF02311 AraC-like ligand binding domain GOQ09_19400 PF12833 Helix-turn-helix domain GOQ09_19425 PF04545 Sigma-70, region 4 GOQ09_19425 PF04542 Sigma-70 region 2 GOQ09_19450 PF03466 LysR substrate binding domain GOQ09_19450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_19475 PF03471 Transporter associated domain GOQ09_19475 PF00571 CBS domain GOQ09_19475 PF01595 Cyclin M transmembrane N-terminal domain GOQ09_19480 PF00149 Calcineurin-like phosphoesterase GOQ09_19485 PF09084 NMT1/THI5 like GOQ09_19495 PF00005 ABC transporter GOQ09_19500 PF00528 Binding-protein-dependent transport system inner membrane component GOQ09_19505 PF09084 NMT1/THI5 like GOQ09_19510 PF00596 Class II Aldolase and Adducin N-terminal domain GOQ09_19515 PF00296 Luciferase-like monooxygenase GOQ09_19520 PF09084 NMT1/THI5 like GOQ09_19525 PF08028 Acyl-CoA dehydrogenase, C-terminal domain GOQ09_19525 PF02770 Acyl-CoA dehydrogenase, middle domain GOQ09_19525 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GOQ09_19530 PF09084 NMT1/THI5 like GOQ09_19535 PF05995 Cysteine dioxygenase type I GOQ09_19545 PF01965 DJ-1/PfpI family GOQ09_19545 PF12833 Helix-turn-helix domain GOQ09_19555 PF00893 Small Multidrug Resistance protein GOQ09_19560 PF00270 DEAD/DEAH box helicase GOQ09_19560 PF00271 Helicase conserved C-terminal domain GOQ09_19565 PF04228 Putative neutral zinc metallopeptidase GOQ09_19570 PF00692 dUTPase GOQ09_19575 PF01979 Amidohydrolase family GOQ09_19590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_19590 PF03466 LysR substrate binding domain GOQ09_19595 PF02608 ABC transporter substrate-binding protein PnrA-like GOQ09_19600 PF03466 LysR substrate binding domain GOQ09_19600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_19605 PF07690 Major Facilitator Superfamily GOQ09_19610 PF00962 Adenosine/AMP deaminase GOQ09_19625 PF00440 Bacterial regulatory proteins, tetR family GOQ09_19625 PF17754 MftR C-terminal domain GOQ09_19630 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase GOQ09_19630 PF03033 Glycosyltransferase family 28 N-terminal domain GOQ09_19640 PF03466 LysR substrate binding domain GOQ09_19640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_19645 PF00107 Zinc-binding dehydrogenase GOQ09_19645 PF08240 Alcohol dehydrogenase GroES-like domain GOQ09_19655 PF01965 DJ-1/PfpI family GOQ09_19660 PF01965 DJ-1/PfpI family GOQ09_19665 PF02608 ABC transporter substrate-binding protein PnrA-like GOQ09_19685 PF00860 Permease family GOQ09_19690 PF03466 LysR substrate binding domain GOQ09_19690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_19695 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase GOQ09_19695 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain GOQ09_19700 PF00111 2Fe-2S iron-sulfur cluster binding domain GOQ09_19700 PF01799 [2Fe-2S] binding domain GOQ09_19705 PF03466 LysR substrate binding domain GOQ09_19705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_19710 PF07995 Glucose / Sorbosone dehydrogenase GOQ09_19730 PF03401 Tripartite tricarboxylate transporter family receptor GOQ09_19750 PF00689 Cation transporting ATPase, C-terminus GOQ09_19750 PF00690 Cation transporter/ATPase, N-terminus GOQ09_19755 PF00171 Aldehyde dehydrogenase family GOQ09_19760 PF05161 MOFRL family GOQ09_19760 PF13660 Domain of unknown function (DUF4147) GOQ09_19780 PF00576 HIUase/Transthyretin family GOQ09_19785 PF07729 FCD domain GOQ09_19785 PF00392 Bacterial regulatory proteins, gntR family GOQ09_19795 PF01546 Peptidase family M20/M25/M40 GOQ09_19795 PF07687 Peptidase dimerisation domain GOQ09_19800 PF07687 Peptidase dimerisation domain GOQ09_19800 PF01546 Peptidase family M20/M25/M40 GOQ09_19805 PF00561 alpha/beta hydrolase fold GOQ09_19815 PF00497 Bacterial extracellular solute-binding proteins, family 3 GOQ09_19830 PF01266 FAD dependent oxidoreductase GOQ09_19835 PF00583 Acetyltransferase (GNAT) family GOQ09_19840 PF01266 FAD dependent oxidoreductase GOQ09_19845 PF00171 Aldehyde dehydrogenase family GOQ09_19855 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin GOQ09_19860 PF01177 Asp/Glu/Hydantoin racemase GOQ09_19875 PF00248 Aldo/keto reductase family GOQ09_19880 PF00083 Sugar (and other) transporter GOQ09_19890 PF13018 Extended Signal Peptide of Type V secretion system GOQ09_19890 PF03797 Autotransporter beta-domain GOQ09_19890 PF03212 Pertactin GOQ09_19890 PF16168 Adhesin of bacterial autotransporter system, probable stalk GOQ09_19895 PF00905 Penicillin binding protein transpeptidase domain GOQ09_19905 PF00672 HAMP domain GOQ09_19905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GOQ09_19905 PF00512 His Kinase A (phospho-acceptor) domain GOQ09_19910 PF00486 Transcriptional regulatory protein, C terminal GOQ09_19910 PF00072 Response regulator receiver domain GOQ09_19920 PF07702 UTRA domain GOQ09_19920 PF00392 Bacterial regulatory proteins, gntR family GOQ09_19935 PF05145 Transition state regulatory protein AbrB GOQ09_19945 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GOQ09_19945 PF01842 ACT domain GOQ09_19945 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GOQ09_19955 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase GOQ09_19960 PF01799 [2Fe-2S] binding domain GOQ09_19960 PF00111 2Fe-2S iron-sulfur cluster binding domain GOQ09_19965 PF00072 Response regulator receiver domain GOQ09_19965 PF00486 Transcriptional regulatory protein, C terminal GOQ09_19970 PF00672 HAMP domain GOQ09_19970 PF00512 His Kinase A (phospho-acceptor) domain GOQ09_19970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GOQ09_19985 PF00005 ABC transporter GOQ09_19985 PF13732 Domain of unknown function (DUF4162) GOQ09_19990 PF00593 TonB dependent receptor GOQ09_19990 PF07715 TonB-dependent Receptor Plug Domain GOQ09_20010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_20010 PF03466 LysR substrate binding domain GOQ09_20020 PF07690 Major Facilitator Superfamily GOQ09_20025 PF02129 X-Pro dipeptidyl-peptidase (S15 family) GOQ09_20030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_20030 PF03466 LysR substrate binding domain GOQ09_20035 PF01569 PAP2 superfamily GOQ09_20040 PF04191 Phospholipid methyltransferase GOQ09_20045 PF00486 Transcriptional regulatory protein, C terminal GOQ09_20045 PF00072 Response regulator receiver domain GOQ09_20055 PF00375 Sodium:dicarboxylate symporter family GOQ09_20065 PF01594 AI-2E family transporter GOQ09_20080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_20080 PF03466 LysR substrate binding domain GOQ09_20085 PF00205 Thiamine pyrophosphate enzyme, central domain GOQ09_20085 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GOQ09_20085 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GOQ09_20090 PF01261 Xylose isomerase-like TIM barrel GOQ09_20095 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase GOQ09_20095 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase GOQ09_20100 PF04820 Tryptophan halogenase GOQ09_20105 PF01515 Phosphate acetyl/butaryl transferase GOQ09_20105 PF03949 Malic enzyme, NAD binding domain GOQ09_20105 PF00390 Malic enzyme, N-terminal domain GOQ09_20115 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component GOQ09_20120 PF03480 Bacterial extracellular solute-binding protein, family 7 GOQ09_20130 PF00005 ABC transporter GOQ09_20135 PF00528 Binding-protein-dependent transport system inner membrane component GOQ09_20160 PF01638 HxlR-like helix-turn-helix GOQ09_20170 PF01037 Lrp/AsnC ligand binding domain GOQ09_20175 PF01266 FAD dependent oxidoreductase GOQ09_20180 PF00355 Rieske [2Fe-2S] domain GOQ09_20190 PF14437 MafB19-like deaminase GOQ09_20195 PF01774 UreD urease accessory protein GOQ09_20215 PF07687 Peptidase dimerisation domain GOQ09_20215 PF01546 Peptidase family M20/M25/M40 GOQ09_20220 PF04328 Selenoprotein, putative GOQ09_20225 PF02554 Carbon starvation protein CstA GOQ09_20225 PF13722 5TM C-terminal transporter carbon starvation CstA GOQ09_20230 PF00877 NlpC/P60 family GOQ09_20240 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term GOQ09_20240 PF12833 Helix-turn-helix domain GOQ09_20245 PF00881 Nitroreductase family GOQ09_20250 PF13193 AMP-binding enzyme C-terminal domain GOQ09_20250 PF00501 AMP-binding enzyme GOQ09_20270 PF00557 Metallopeptidase family M24 GOQ09_20280 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GOQ09_20285 PF00512 His Kinase A (phospho-acceptor) domain GOQ09_20285 PF00989 PAS fold GOQ09_20285 PF16736 Single Cache-like GOQ09_20285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GOQ09_20290 PF00486 Transcriptional regulatory protein, C terminal GOQ09_20290 PF00072 Response regulator receiver domain GOQ09_20315 PF12833 Helix-turn-helix domain GOQ09_20315 PF12852 Cupin GOQ09_20320 PF00106 short chain dehydrogenase GOQ09_20365 PF03401 Tripartite tricarboxylate transporter family receptor GOQ09_20375 PF03401 Tripartite tricarboxylate transporter family receptor GOQ09_20380 PF13378 Enolase C-terminal domain-like GOQ09_20385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_20385 PF03466 LysR substrate binding domain GOQ09_20410 PF03104 DNA polymerase family B, exonuclease domain GOQ09_20410 PF00136 DNA polymerase family B GOQ09_20415 PF00196 Bacterial regulatory proteins, luxR family GOQ09_20415 PF00072 Response regulator receiver domain GOQ09_20420 PF17200 Single Cache domain 2 GOQ09_20420 PF07730 Histidine kinase GOQ09_20430 PF00248 Aldo/keto reductase family GOQ09_20435 PF07690 Major Facilitator Superfamily GOQ09_20440 PF00005 ABC transporter GOQ09_20445 PF12399 Branched-chain amino acid ATP-binding cassette transporter GOQ09_20445 PF00005 ABC transporter GOQ09_20450 PF02653 Branched-chain amino acid transport system / permease component GOQ09_20455 PF02653 Branched-chain amino acid transport system / permease component GOQ09_20480 PF03976 Polyphosphate kinase 2 (PPK2) GOQ09_20490 PF02811 PHP domain GOQ09_20500 PF01300 Telomere recombination GOQ09_20505 PF02163 Peptidase family M50 GOQ09_20510 PF00579 tRNA synthetases class I (W and Y) GOQ09_20515 PF00196 Bacterial regulatory proteins, luxR family GOQ09_20515 PF00072 Response regulator receiver domain GOQ09_20520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GOQ09_20520 PF00672 HAMP domain GOQ09_20520 PF00072 Response regulator receiver domain GOQ09_20520 PF00512 His Kinase A (phospho-acceptor) domain GOQ09_20520 PF01627 Hpt domain GOQ09_20530 PF01381 Helix-turn-helix GOQ09_20545 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GOQ09_20545 PF02403 Seryl-tRNA synthetase N-terminal domain GOQ09_20550 PF06983 3-demethylubiquinone-9 3-methyltransferase GOQ09_20555 PF13291 ACT domain GOQ09_20555 PF00291 Pyridoxal-phosphate dependent enzyme GOQ09_20560 PF02401 LytB protein GOQ09_20565 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GOQ09_20570 PF04002 RadC-like JAB domain GOQ09_20575 PF01713 Smr domain GOQ09_20580 PF07992 Pyridine nucleotide-disulphide oxidoreductase GOQ09_20580 PF14759 Reductase C-terminal GOQ09_20590 PF00497 Bacterial extracellular solute-binding proteins, family 3 GOQ09_20595 PF00528 Binding-protein-dependent transport system inner membrane component GOQ09_20600 PF00528 Binding-protein-dependent transport system inner membrane component GOQ09_20605 PF00005 ABC transporter GOQ09_20610 PF03171 2OG-Fe(II) oxygenase superfamily GOQ09_20610 PF14226 non-haem dioxygenase in morphine synthesis N-terminal GOQ09_20615 PF13419 Haloacid dehalogenase-like hydrolase GOQ09_20620 PF07690 Major Facilitator Superfamily GOQ09_20620 PF00083 Sugar (and other) transporter GOQ09_20625 PF00116 Cytochrome C oxidase subunit II, periplasmic domain GOQ09_20625 PF06481 COX Aromatic Rich Motif GOQ09_20630 PF00115 Cytochrome C and Quinol oxidase polypeptide I GOQ09_20635 PF00510 Cytochrome c oxidase subunit III GOQ09_20640 PF03626 Prokaryotic Cytochrome C oxidase subunit IV GOQ09_20650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GOQ09_20650 PF00512 His Kinase A (phospho-acceptor) domain GOQ09_20655 PF00072 Response regulator receiver domain GOQ09_20660 PF03006 Haemolysin-III related GOQ09_20680 PF02634 FdhD/NarQ family GOQ09_20700 PF13247 4Fe-4S dicluster domain GOQ09_20705 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GOQ09_20705 PF00384 Molybdopterin oxidoreductase GOQ09_20705 PF01568 Molydopterin dinucleotide binding domain GOQ09_20735 PF00005 ABC transporter GOQ09_20735 PF03459 TOBE domain GOQ09_20745 PF00528 Binding-protein-dependent transport system inner membrane component GOQ09_20750 PF03459 TOBE domain GOQ09_20750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_20755 PF01568 Molydopterin dinucleotide binding domain GOQ09_20755 PF00384 Molybdopterin oxidoreductase GOQ09_20755 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GOQ09_20760 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit GOQ09_20760 PF10531 SLBB domain GOQ09_20760 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region GOQ09_20765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_20765 PF03466 LysR substrate binding domain GOQ09_20770 PF10609 NUBPL iron-transfer P-loop NTPase GOQ09_20780 PF13305 Tetracyclin repressor-like, C-terminal domain GOQ09_20780 PF00440 Bacterial regulatory proteins, tetR family GOQ09_20795 PF04337 Protein of unknown function, DUF480 GOQ09_20800 PF09992 Phosphodiester glycosidase GOQ09_20805 PF18324 Hypothetical protein TT1725 GOQ09_20805 PF00180 Isocitrate/isopropylmalate dehydrogenase GOQ09_20810 PF09334 tRNA synthetases class I (M) GOQ09_20810 PF01588 Putative tRNA binding domain GOQ09_20820 PF00916 Sulfate permease family GOQ09_20820 PF01740 STAS domain GOQ09_20835 PF02616 Segregation and condensation protein ScpA GOQ09_20840 PF02910 Fumarate reductase flavoprotein C-term GOQ09_20840 PF00890 FAD binding domain GOQ09_20845 PF02548 Ketopantoate hydroxymethyltransferase GOQ09_20850 PF02569 Pantoate-beta-alanine ligase GOQ09_20865 PF02445 Quinolinate synthetase A protein GOQ09_20870 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain GOQ09_20870 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain GOQ09_20875 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus GOQ09_20875 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus GOQ09_20880 PF02556 Preprotein translocase subunit SecB GOQ09_20885 PF00462 Glutaredoxin GOQ09_20890 PF00581 Rhodanese-like domain GOQ09_20895 PF00300 Histidine phosphatase superfamily (branch 1) GOQ09_20900 PF13180 PDZ domain GOQ09_20900 PF03572 Peptidase family S41 GOQ09_20905 PF00899 ThiF family GOQ09_20910 PF05170 AsmA family GOQ09_20920 PF00072 Response regulator receiver domain GOQ09_20920 PF00196 Bacterial regulatory proteins, luxR family GOQ09_20925 PF07730 Histidine kinase GOQ09_20925 PF05231 MASE1 GOQ09_20925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GOQ09_20965 PF00893 Small Multidrug Resistance protein GOQ09_20975 PF01227 GTP cyclohydrolase I GOQ09_20980 PF03372 Endonuclease/Exonuclease/phosphatase family GOQ09_20985 PF00293 NUDIX domain GOQ09_20990 PF00152 tRNA synthetases class II (D, K and N) GOQ09_20990 PF01336 OB-fold nucleic acid binding domain GOQ09_20990 PF02938 GAD domain GOQ09_21005 PF00474 Sodium:solute symporter family GOQ09_21010 PF03109 ABC1 family GOQ09_21025 PF01209 ubiE/COQ5 methyltransferase family GOQ09_21045 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GOQ09_21045 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GOQ09_21050 PF13416 Bacterial extracellular solute-binding protein GOQ09_21055 PF00528 Binding-protein-dependent transport system inner membrane component GOQ09_21060 PF00528 Binding-protein-dependent transport system inner membrane component GOQ09_21065 PF00005 ABC transporter GOQ09_21065 PF17912 MalK OB fold domain GOQ09_21070 PF03009 Glycerophosphoryl diester phosphodiesterase family GOQ09_21075 PF12795 Mechanosensitive ion channel porin domain GOQ09_21075 PF12794 Mechanosensitive ion channel inner membrane domain 1 GOQ09_21075 PF00924 Mechanosensitive ion channel GOQ09_21090 PF08479 POTRA domain, ShlB-type GOQ09_21090 PF17287 POTRA domain GOQ09_21090 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB GOQ09_21100 PF13332 Hemagglutinin repeat GOQ09_21100 PF13018 Extended Signal Peptide of Type V secretion system GOQ09_21100 PF04829 Pre-toxin domain with VENN motif GOQ09_21100 PF05860 haemagglutination activity domain GOQ09_21105 PF01312 FlhB HrpN YscU SpaS Family GOQ09_21110 PF00771 FHIPEP family GOQ09_21115 PF00448 SRP54-type protein, GTPase domain GOQ09_21125 PF04542 Sigma-70 region 2 GOQ09_21125 PF04545 Sigma-70, region 4 GOQ09_21125 PF04539 Sigma-70 region 3 GOQ09_21130 PF13411 MerR HTH family regulatory protein GOQ09_21130 PF07739 TipAS antibiotic-recognition domain GOQ09_21135 PF03055 Retinal pigment epithelial membrane protein GOQ09_21145 PF04344 Chemotaxis phosphatase, CheZ GOQ09_21150 PF00072 Response regulator receiver domain GOQ09_21155 PF00072 Response regulator receiver domain GOQ09_21155 PF01339 CheB methylesterase GOQ09_21165 PF01739 CheR methyltransferase, SAM binding domain GOQ09_21165 PF03705 CheR methyltransferase, all-alpha domain GOQ09_21170 PF00563 EAL domain GOQ09_21170 PF08668 HDOD domain GOQ09_21175 PF02895 Signal transducing histidine kinase, homodimeric domain GOQ09_21175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GOQ09_21175 PF01627 Hpt domain GOQ09_21175 PF09078 CheY binding GOQ09_21175 PF01584 CheW-like domain GOQ09_21180 PF13677 Membrane MotB of proton-channel complex MotA/MotB GOQ09_21180 PF00691 OmpA family GOQ09_21185 PF01618 MotA/TolQ/ExbB proton channel family GOQ09_21190 PF05280 Flagellar transcriptional activator (FlhC) GOQ09_21195 PF05247 Flagellar transcriptional activator (FlhD) GOQ09_21215 PF02561 Flagellar protein FliS GOQ09_21220 PF02465 Flagellar hook-associated protein 2 N-terminus GOQ09_21220 PF07195 Flagellar hook-associated protein 2 C-terminus GOQ09_21225 PF03646 FlaG protein GOQ09_21230 PF00669 Bacterial flagellin N-terminal helical region GOQ09_21230 PF08884 Flagellin D3 domain GOQ09_21230 PF00700 Bacterial flagellin C-terminal helical region GOQ09_21240 PF01514 Secretory protein of YscJ/FliF family GOQ09_21240 PF08345 Flagellar M-ring protein C-terminal GOQ09_21245 PF01706 FliG C-terminal domain GOQ09_21245 PF14842 FliG N-terminal domain GOQ09_21245 PF14841 FliG middle domain GOQ09_21250 PF02108 Flagellar assembly protein FliH GOQ09_21255 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GOQ09_21255 PF18269 T3SS EscN ATPase C-terminal domain GOQ09_21260 PF02050 Flagellar FliJ protein GOQ09_21270 PF03748 Flagellar basal body-associated protein FliL GOQ09_21275 PF02154 Flagellar motor switch protein FliM GOQ09_21275 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term GOQ09_21280 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term GOQ09_21280 PF16973 Flagellar motor switch protein FliN N-terminal GOQ09_21285 PF04347 Flagellar biosynthesis protein, FliO GOQ09_21290 PF00813 FliP family GOQ09_21295 PF01313 Bacterial export proteins, family 3 GOQ09_21300 PF01311 Bacterial export proteins, family 1 GOQ09_21305 PF00669 Bacterial flagellin N-terminal helical region GOQ09_21310 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GOQ09_21310 PF00460 Flagella basal body rod protein GOQ09_21320 PF00672 HAMP domain GOQ09_21320 PF02203 Tar ligand binding domain homologue GOQ09_21320 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GOQ09_21325 PF00672 HAMP domain GOQ09_21325 PF02203 Tar ligand binding domain homologue GOQ09_21325 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GOQ09_21330 PF02203 Tar ligand binding domain homologue GOQ09_21330 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GOQ09_21330 PF00672 HAMP domain GOQ09_21335 PF01584 CheW-like domain GOQ09_21340 PF00672 HAMP domain GOQ09_21340 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GOQ09_21340 PF17200 Single Cache domain 2 GOQ09_21345 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GOQ09_21345 PF02203 Tar ligand binding domain homologue GOQ09_21345 PF00672 HAMP domain GOQ09_21350 PF01584 CheW-like domain GOQ09_21355 PF10135 Rod binding protein GOQ09_21355 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase GOQ09_21365 PF02107 Flagellar L-ring protein GOQ09_21370 PF00460 Flagella basal body rod protein GOQ09_21370 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GOQ09_21375 PF00460 Flagella basal body rod protein GOQ09_21375 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GOQ09_21380 PF07559 Flagellar basal body protein FlaE GOQ09_21380 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GOQ09_21380 PF00460 Flagella basal body rod protein GOQ09_21385 PF13861 FlgD Tudor-like domain GOQ09_21385 PF13860 FlgD Ig-like domain GOQ09_21385 PF03963 Flagellar hook capping protein - N-terminal region GOQ09_21390 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GOQ09_21390 PF00460 Flagella basal body rod protein GOQ09_21395 PF00460 Flagella basal body rod protein GOQ09_21425 PF01488 Shikimate / quinate 5-dehydrogenase GOQ09_21425 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain GOQ09_21425 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain GOQ09_21430 PF03462 PCRF domain GOQ09_21430 PF00472 RF-1 domain GOQ09_21435 PF05175 Methyltransferase small domain GOQ09_21435 PF17827 PrmC N-terminal domain GOQ09_21440 PF00462 Glutaredoxin GOQ09_21450 PF03471 Transporter associated domain GOQ09_21450 PF00571 CBS domain GOQ09_21450 PF01595 Cyclin M transmembrane N-terminal domain GOQ09_21455 PF01464 Transglycosylase SLT domain GOQ09_21455 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain GOQ09_21460 PF03129 Anticodon binding domain GOQ09_21460 PF04073 Aminoacyl-tRNA editing domain GOQ09_21460 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GOQ09_21465 PF00293 NUDIX domain GOQ09_21475 PF00696 Amino acid kinase family GOQ09_21475 PF01472 PUA domain GOQ09_21480 PF01018 GTP1/OBG GOQ09_21480 PF01926 50S ribosome-binding GTPase GOQ09_21485 PF01016 Ribosomal L27 protein GOQ09_21490 PF00829 Ribosomal prokaryotic L21 protein GOQ09_21495 PF00348 Polyprenyl synthetase GOQ09_21505 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain GOQ09_21505 PF00437 Type II/IV secretion system protein GOQ09_21510 PF00482 Type II secretion system (T2SS), protein F GOQ09_21515 PF06750 Bacterial Peptidase A24 N-terminal domain GOQ09_21515 PF01478 Type IV leader peptidase family GOQ09_21520 PF01121 Dephospho-CoA kinase GOQ09_21525 PF03062 MBOAT, membrane-bound O-acyltransferase family GOQ09_21535 PF07072 Cell division protein GOQ09_21540 PF03884 DNA gyrase inhibitor YacG GOQ09_21545 PF01757 Acyltransferase family GOQ09_21550 PF00293 NUDIX domain GOQ09_21560 PF01960 ArgJ family GOQ09_21565 PF02810 SEC-C motif GOQ09_21565 PF01043 SecA preprotein cross-linking domain GOQ09_21565 PF07516 SecA Wing and Scaffold domain GOQ09_21565 PF07517 SecA DEAD-like domain GOQ09_21575 PF03401 Tripartite tricarboxylate transporter family receptor GOQ09_21580 PF00291 Pyridoxal-phosphate dependent enzyme GOQ09_21585 PF03466 LysR substrate binding domain GOQ09_21585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_21595 PF00072 Response regulator receiver domain GOQ09_21600 PF00512 His Kinase A (phospho-acceptor) domain GOQ09_21600 PF00072 Response regulator receiver domain GOQ09_21600 PF00672 HAMP domain GOQ09_21600 PF01627 Hpt domain GOQ09_21600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GOQ09_21600 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) GOQ09_21605 PF00547 Urease, gamma subunit GOQ09_21610 PF04955 HupE / UreJ protein GOQ09_21615 PF00699 Urease beta subunit GOQ09_21620 PF01979 Amidohydrolase family GOQ09_21620 PF00449 Urease alpha-subunit, N-terminal domain GOQ09_21625 PF02814 UreE urease accessory protein, N-terminal domain GOQ09_21625 PF05194 UreE urease accessory protein, C-terminal domain GOQ09_21630 PF01730 UreF GOQ09_21635 PF02492 CobW/HypB/UreG, nucleotide-binding domain GOQ09_21650 PF05170 AsmA family GOQ09_21660 PF00216 Bacterial DNA-binding protein GOQ09_21675 PF02321 Outer membrane efflux protein GOQ09_21710 PF03412 Peptidase C39 family GOQ09_21710 PF00005 ABC transporter GOQ09_21710 PF00664 ABC transporter transmembrane region GOQ09_21765 PF04055 Radical SAM superfamily GOQ09_21765 PF06969 HemN C-terminal domain GOQ09_21770 PF01725 Ham1 family GOQ09_21775 PF01138 3' exoribonuclease family, domain 1 GOQ09_21775 PF03725 3' exoribonuclease family, domain 2 GOQ09_21785 PF03793 PASTA domain GOQ09_21785 PF00069 Protein kinase domain GOQ09_21790 PF08340 Domain of unknown function (DUF1732) GOQ09_21790 PF03755 YicC-like family, N-terminal region GOQ09_21795 PF00625 Guanylate kinase GOQ09_21800 PF01192 RNA polymerase Rpb6 GOQ09_21805 PF04607 Region found in RelA / SpoT proteins GOQ09_21805 PF13291 ACT domain GOQ09_21805 PF02824 TGS domain GOQ09_21810 PF01272 Transcription elongation factor, GreA/GreB, C-term GOQ09_21810 PF03449 Transcription elongation factor, N-terminal GOQ09_21835 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding GOQ09_21835 PF01628 HrcA protein C terminal domain GOQ09_21840 PF01513 ATP-NAD kinase GOQ09_21845 PF02463 RecF/RecN/SMC N terminal domain GOQ09_21850 PF03668 P-loop ATPase protein family GOQ09_21855 PF00730 HhH-GPD superfamily base excision DNA repair protein GOQ09_21855 PF00633 Helix-hairpin-helix motif GOQ09_21855 PF14815 NUDIX domain GOQ09_21860 PF00350 Dynamin family GOQ09_21865 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain GOQ09_21865 PF06827 Zinc finger found in FPG and IleRS GOQ09_21865 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain GOQ09_21880 PF00288 GHMP kinases N terminal domain GOQ09_21880 PF08544 GHMP kinases C terminal GOQ09_21890 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase GOQ09_21890 PF14572 Phosphoribosyl synthetase-associated domain GOQ09_21895 PF14693 Ribosomal protein TL5, C-terminal domain GOQ09_21895 PF01386 Ribosomal L25p family GOQ09_21900 PF01195 Peptidyl-tRNA hydrolase GOQ09_21910 PF00037 4Fe-4S binding domain GOQ09_21915 PF00528 Binding-protein-dependent transport system inner membrane component GOQ09_21920 PF00528 Binding-protein-dependent transport system inner membrane component GOQ09_21920 PF12911 N-terminal TM domain of oligopeptide transport permease C GOQ09_21925 PF00005 ABC transporter GOQ09_21925 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GOQ09_21930 PF00005 ABC transporter GOQ09_21930 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GOQ09_21935 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GOQ09_21940 PF01425 Amidase GOQ09_21950 PF03466 LysR substrate binding domain GOQ09_21950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_21965 PF00300 Histidine phosphatase superfamily (branch 1) GOQ09_21975 PF12697 Alpha/beta hydrolase family GOQ09_21980 PF01470 Pyroglutamyl peptidase GOQ09_21985 PF03746 LamB/YcsF family GOQ09_21990 PF02626 Carboxyltransferase domain, subdomain A and B GOQ09_21995 PF02682 Carboxyltransferase domain, subdomain C and D GOQ09_22000 PF01467 Cytidylyltransferase-like GOQ09_22020 PF05193 Peptidase M16 inactive domain GOQ09_22025 PF05193 Peptidase M16 inactive domain GOQ09_22025 PF00675 Insulinase (Peptidase family M16) GOQ09_22030 PF00448 SRP54-type protein, GTPase domain GOQ09_22030 PF02881 SRP54-type protein, helical bundle domain GOQ09_22040 PF09456 RcsC Alpha-Beta-Loop (ABL) GOQ09_22040 PF00512 His Kinase A (phospho-acceptor) domain GOQ09_22040 PF00072 Response regulator receiver domain GOQ09_22040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GOQ09_22045 PF00072 Response regulator receiver domain GOQ09_22045 PF00196 Bacterial regulatory proteins, luxR family GOQ09_22055 PF04545 Sigma-70, region 4 GOQ09_22055 PF04542 Sigma-70 region 2 GOQ09_22055 PF00140 Sigma-70 factor, region 1.2 GOQ09_22060 PF08713 DNA alkylation repair enzyme GOQ09_22065 PF02630 SCO1/SenC GOQ09_22070 PF01040 UbiA prenyltransferase family GOQ09_22095 PF00510 Cytochrome c oxidase subunit III GOQ09_22105 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 GOQ09_22110 PF00115 Cytochrome C and Quinol oxidase polypeptide I GOQ09_22115 PF00116 Cytochrome C oxidase subunit II, periplasmic domain GOQ09_22115 PF02790 Cytochrome C oxidase subunit II, transmembrane domain GOQ09_22125 PF08241 Methyltransferase domain GOQ09_22130 PF00156 Phosphoribosyl transferase domain GOQ09_22135 PF00588 SpoU rRNA Methylase family GOQ09_22145 PF01883 Iron-sulfur cluster assembly protein GOQ09_22145 PF10609 NUBPL iron-transfer P-loop NTPase GOQ09_22150 PF02525 Flavodoxin-like fold GOQ09_22155 PF02254 TrkA-N domain GOQ09_22155 PF00999 Sodium/hydrogen exchanger family GOQ09_22165 PF00378 Enoyl-CoA hydratase/isomerase GOQ09_22170 PF13193 AMP-binding enzyme C-terminal domain GOQ09_22170 PF00501 AMP-binding enzyme GOQ09_22175 PF00106 short chain dehydrogenase GOQ09_22180 PF03401 Tripartite tricarboxylate transporter family receptor GOQ09_22185 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GOQ09_22185 PF12806 Acetyl-CoA dehydrogenase C-terminal like GOQ09_22185 PF02770 Acyl-CoA dehydrogenase, middle domain GOQ09_22185 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GOQ09_22200 PF06983 3-demethylubiquinone-9 3-methyltransferase GOQ09_22210 PF07690 Major Facilitator Superfamily GOQ09_22215 PF07237 Protein of unknown function (DUF1428) GOQ09_22235 PF02743 Cache domain GOQ09_22235 PF00211 Adenylate and Guanylate cyclase catalytic domain GOQ09_22235 PF00672 HAMP domain GOQ09_22245 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain GOQ09_22245 PF01137 RNA 3'-terminal phosphate cyclase GOQ09_22250 PF10127 RNA repair pathway DNA polymerase beta family GOQ09_22255 PF00753 Metallo-beta-lactamase superfamily GOQ09_22265 PF01139 tRNA-splicing ligase RtcB GOQ09_22280 PF06956 Regulator of RNA terminal phosphate cyclase GOQ09_22280 PF00158 Sigma-54 interaction domain GOQ09_22285 PF12146 Serine aminopeptidase, S33 GOQ09_22290 PF02423 Ornithine cyclodeaminase/mu-crystallin family GOQ09_22300 PF17991 Thioredoxin like C-terminal domain GOQ09_22300 PF02683 Cytochrome C biogenesis protein transmembrane region GOQ09_22300 PF00578 AhpC/TSA family GOQ09_22305 PF00512 His Kinase A (phospho-acceptor) domain GOQ09_22305 PF00672 HAMP domain GOQ09_22305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GOQ09_22310 PF02566 OsmC-like protein GOQ09_22315 PF00072 Response regulator receiver domain GOQ09_22315 PF00486 Transcriptional regulatory protein, C terminal GOQ09_22320 PF17991 Thioredoxin like C-terminal domain GOQ09_22320 PF00578 AhpC/TSA family GOQ09_22320 PF02683 Cytochrome C biogenesis protein transmembrane region GOQ09_22325 PF03401 Tripartite tricarboxylate transporter family receptor GOQ09_22330 PF03401 Tripartite tricarboxylate transporter family receptor GOQ09_22335 PF00108 Thiolase, N-terminal domain GOQ09_22335 PF02803 Thiolase, C-terminal domain GOQ09_22340 PF01144 Coenzyme A transferase GOQ09_22345 PF01144 Coenzyme A transferase GOQ09_22350 PF09339 IclR helix-turn-helix domain GOQ09_22350 PF01614 Bacterial transcriptional regulator GOQ09_22355 PF03401 Tripartite tricarboxylate transporter family receptor GOQ09_22375 PF01478 Type IV leader peptidase family GOQ09_22375 PF06750 Bacterial Peptidase A24 N-terminal domain GOQ09_22385 PF13629 Pilus formation protein N terminal region GOQ09_22385 PF00263 Bacterial type II and III secretion system protein GOQ09_22385 PF04972 BON domain GOQ09_22395 PF00437 Type II/IV secretion system protein GOQ09_22435 PF00158 Sigma-54 interaction domain GOQ09_22435 PF02954 Bacterial regulatory protein, Fis family GOQ09_22435 PF01590 GAF domain GOQ09_22445 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GOQ09_22445 PF00529 HlyD membrane-fusion protein of T1SS GOQ09_22450 PF03412 Peptidase C39 family GOQ09_22450 PF00005 ABC transporter GOQ09_22450 PF00664 ABC transporter transmembrane region GOQ09_22460 PF01225 Mur ligase family, catalytic domain GOQ09_22460 PF08245 Mur ligase middle domain GOQ09_22460 PF02875 Mur ligase family, glutamate ligase domain GOQ09_22465 PF00691 OmpA family GOQ09_22480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_22480 PF03466 LysR substrate binding domain GOQ09_22485 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal GOQ09_22485 PF00775 Dioxygenase GOQ09_22495 PF00034 Cytochrome c GOQ09_22500 PF17862 AAA+ lid domain GOQ09_22500 PF01434 Peptidase family M41 GOQ09_22500 PF00004 ATPase family associated with various cellular activities (AAA) GOQ09_22525 PF04357 TamB, inner membrane protein subunit of TAM complex GOQ09_22535 PF03466 LysR substrate binding domain GOQ09_22535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_22545 PF03466 LysR substrate binding domain GOQ09_22545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_22550 PF02887 Pyruvate kinase, alpha/beta domain GOQ09_22550 PF00224 Pyruvate kinase, barrel domain GOQ09_22555 PF08546 Ketopantoate reductase PanE/ApbA C terminal GOQ09_22555 PF02558 Ketopantoate reductase PanE/ApbA GOQ09_22560 PF01557 Fumarylacetoacetate (FAA) hydrolase family GOQ09_22565 PF00549 CoA-ligase GOQ09_22565 PF02629 CoA binding domain GOQ09_22570 PF00549 CoA-ligase GOQ09_22570 PF08442 ATP-grasp domain GOQ09_22580 PF02515 CoA-transferase family III GOQ09_22585 PF00512 His Kinase A (phospho-acceptor) domain GOQ09_22585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GOQ09_22585 PF00989 PAS fold GOQ09_22590 PF02515 CoA-transferase family III GOQ09_22595 PF00205 Thiamine pyrophosphate enzyme, central domain GOQ09_22595 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GOQ09_22595 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GOQ09_22610 PF01970 Tripartite tricarboxylate transporter TctA family GOQ09_22640 PF03466 LysR substrate binding domain GOQ09_22640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_22650 PF00544 Pectate lyase GOQ09_22660 PF00990 Diguanylate cyclase, GGDEF domain GOQ09_22660 PF00563 EAL domain GOQ09_22660 PF03707 Bacterial signalling protein N terminal repeat GOQ09_22665 PF01553 Acyltransferase GOQ09_22670 PF01979 Amidohydrolase family GOQ09_22675 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain GOQ09_22675 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain GOQ09_22680 PF00156 Phosphoribosyl transferase domain GOQ09_22685 PF03652 Holliday junction resolvase GOQ09_22690 PF02622 Uncharacterized ACR, COG1678 GOQ09_22695 PF00875 DNA photolyase GOQ09_22695 PF03441 FAD binding domain of DNA photolyase GOQ09_22700 PF01584 CheW-like domain GOQ09_22700 PF01627 Hpt domain GOQ09_22700 PF00072 Response regulator receiver domain GOQ09_22700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GOQ09_22705 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term GOQ09_22705 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GOQ09_22715 PF00072 Response regulator receiver domain GOQ09_22720 PF00072 Response regulator receiver domain GOQ09_22725 PF00301 Rubredoxin GOQ09_22730 PF08543 Phosphomethylpyrimidine kinase GOQ09_22730 PF02581 Thiamine monophosphate synthase GOQ09_22730 PF03070 TENA/THI-4/PQQC family GOQ09_22735 PF00202 Aminotransferase class-III GOQ09_22740 PF01808 AICARFT/IMPCHase bienzyme GOQ09_22740 PF02142 MGS-like domain GOQ09_22745 PF02954 Bacterial regulatory protein, Fis family GOQ09_22750 PF01207 Dihydrouridine synthase (Dus) GOQ09_22755 PF09335 SNARE associated Golgi protein GOQ09_22765 PF01926 50S ribosome-binding GTPase GOQ09_22765 PF06071 Protein of unknown function (DUF933) GOQ09_22770 PF13407 Periplasmic binding protein domain GOQ09_22775 PF00005 ABC transporter GOQ09_22780 PF02653 Branched-chain amino acid transport system / permease component GOQ09_22785 PF00356 Bacterial regulatory proteins, lacI family GOQ09_22790 PF00294 pfkB family carbohydrate kinase GOQ09_22795 PF05025 RbsD / FucU transport protein family GOQ09_22810 PF01494 FAD binding domain GOQ09_22815 PF13098 Thioredoxin-like domain GOQ09_22815 PF10411 Disulfide bond isomerase protein N-terminus GOQ09_22825 PF00378 Enoyl-CoA hydratase/isomerase GOQ09_22845 PF17932 Tetracyclin repressor-like, C-terminal domain GOQ09_22845 PF00440 Bacterial regulatory proteins, tetR family GOQ09_22855 PF13532 2OG-Fe(II) oxygenase superfamily GOQ09_22860 PF00155 Aminotransferase class I and II GOQ09_22860 PF00392 Bacterial regulatory proteins, gntR family GOQ09_22870 PF00034 Cytochrome c GOQ09_22875 PF00034 Cytochrome c GOQ09_22875 PF13442 Cytochrome C oxidase, cbb3-type, subunit III GOQ09_22875 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase GOQ09_22890 PF01545 Cation efflux family GOQ09_22895 PF05496 Holliday junction DNA helicase RuvB P-loop domain GOQ09_22895 PF05491 RuvB C-terminal winged helix domain GOQ09_22895 PF17864 RuvB AAA lid domain GOQ09_22900 PF01066 CDP-alcohol phosphatidyltransferase GOQ09_22905 PF12146 Serine aminopeptidase, S33 GOQ09_22905 PF12147 Putative methyltransferase GOQ09_22940 PF01330 RuvA N terminal domain GOQ09_22940 PF07499 RuvA, C-terminal domain GOQ09_22945 PF02562 PhoH-like protein GOQ09_22950 PF02130 Uncharacterized protein family UPF0054 GOQ09_22955 PF13649 Methyltransferase domain GOQ09_22960 PF02580 D-Tyr-tRNA(Tyr) deacylase GOQ09_22965 PF01545 Cation efflux family GOQ09_22965 PF16916 Dimerisation domain of Zinc Transporter GOQ09_22985 PF01551 Peptidase family M23 GOQ09_22985 PF04225 Opacity-associated protein A LysM-like domain GOQ09_22990 PF03702 Anhydro-N-acetylmuramic acid kinase GOQ09_22995 PF01521 Iron-sulphur cluster biosynthesis GOQ09_23000 PF00380 Ribosomal protein S9/S16 GOQ09_23005 PF00572 Ribosomal protein L13 GOQ09_23010 PF13180 PDZ domain GOQ09_23020 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ GOQ09_23025 PF03330 Lytic transglycolase GOQ09_23030 PF02219 Methylenetetrahydrofolate reductase GOQ09_23035 PF01479 S4 domain GOQ09_23035 PF01728 FtsJ-like methyltransferase GOQ09_23040 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain GOQ09_23040 PF05221 S-adenosyl-L-homocysteine hydrolase GOQ09_23050 PF16658 Class II release factor RF3, C-terminal domain GOQ09_23050 PF03144 Elongation factor Tu domain 2 GOQ09_23050 PF00009 Elongation factor Tu GTP binding domain GOQ09_23070 PF03401 Tripartite tricarboxylate transporter family receptor GOQ09_23075 PF00850 Histone deacetylase domain GOQ09_23080 PF02423 Ornithine cyclodeaminase/mu-crystallin family GOQ09_23085 PF17755 UvrA DNA-binding domain GOQ09_23085 PF17760 UvrA interaction domain GOQ09_23085 PF00005 ABC transporter GOQ09_23090 PF13458 Periplasmic binding protein GOQ09_23100 PF08946 Osmosensory transporter coiled coil GOQ09_23100 PF00083 Sugar (and other) transporter GOQ09_23120 PF00682 HMGL-like GOQ09_23125 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GOQ09_23125 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GOQ09_23125 PF02770 Acyl-CoA dehydrogenase, middle domain GOQ09_23130 PF02515 CoA-transferase family III GOQ09_23135 PF03401 Tripartite tricarboxylate transporter family receptor GOQ09_23145 PF01614 Bacterial transcriptional regulator GOQ09_23145 PF09339 IclR helix-turn-helix domain GOQ09_23150 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GOQ09_23160 PF00364 Biotin-requiring enzyme GOQ09_23160 PF02785 Biotin carboxylase C-terminal domain GOQ09_23160 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GOQ09_23160 PF00289 Biotin carboxylase, N-terminal domain GOQ09_23170 PF00378 Enoyl-CoA hydratase/isomerase GOQ09_23175 PF01039 Carboxyl transferase domain GOQ09_23180 PF00501 AMP-binding enzyme GOQ09_23180 PF13193 AMP-binding enzyme C-terminal domain GOQ09_23185 PF02770 Acyl-CoA dehydrogenase, middle domain GOQ09_23185 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GOQ09_23185 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GOQ09_23200 PF13419 Haloacid dehalogenase-like hydrolase GOQ09_23205 PF01964 Radical SAM ThiC family GOQ09_23205 PF13667 ThiC-associated domain GOQ09_23215 PF00196 Bacterial regulatory proteins, luxR family GOQ09_23220 PF01425 Amidase GOQ09_23225 PF00149 Calcineurin-like phosphoesterase GOQ09_23230 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GOQ09_23230 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GOQ09_23230 PF02770 Acyl-CoA dehydrogenase, middle domain GOQ09_23235 PF01546 Peptidase family M20/M25/M40 GOQ09_23235 PF07687 Peptidase dimerisation domain GOQ09_23240 PF00108 Thiolase, N-terminal domain GOQ09_23240 PF02803 Thiolase, C-terminal domain GOQ09_23245 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) GOQ09_23250 PF00484 Carbonic anhydrase GOQ09_23255 PF13411 MerR HTH family regulatory protein GOQ09_23270 PF00849 RNA pseudouridylate synthase GOQ09_23295 PF02092 Glycyl-tRNA synthetase beta subunit GOQ09_23295 PF05746 DALR anticodon binding domain GOQ09_23300 PF02091 Glycyl-tRNA synthetase alpha subunit GOQ09_23305 PF00781 Diacylglycerol kinase catalytic domain GOQ09_23310 PF00149 Calcineurin-like phosphoesterase GOQ09_23315 PF01569 PAP2 superfamily GOQ09_23320 PF17763 Glutaminase/Asparaginase C-terminal domain GOQ09_23320 PF00710 Asparaginase, N-terminal GOQ09_23330 PF03466 LysR substrate binding domain GOQ09_23330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_23335 PF07690 Major Facilitator Superfamily GOQ09_23345 PF01979 Amidohydrolase family GOQ09_23350 PF02633 Creatinine amidohydrolase GOQ09_23360 PF00005 ABC transporter GOQ09_23365 PF00528 Binding-protein-dependent transport system inner membrane component GOQ09_23375 PF00795 Carbon-nitrogen hydrolase GOQ09_23380 PF00571 CBS domain GOQ09_23380 PF03471 Transporter associated domain GOQ09_23390 PF13404 AsnC-type helix-turn-helix domain GOQ09_23390 PF01037 Lrp/AsnC ligand binding domain GOQ09_23395 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GOQ09_23400 PF00497 Bacterial extracellular solute-binding proteins, family 3 GOQ09_23405 PF00351 Biopterin-dependent aromatic amino acid hydroxylase GOQ09_23410 PF13193 AMP-binding enzyme C-terminal domain GOQ09_23410 PF00501 AMP-binding enzyme GOQ09_23475 PF13091 PLD-like domain GOQ09_23510 PF03401 Tripartite tricarboxylate transporter family receptor GOQ09_23520 PF01494 FAD binding domain GOQ09_23555 PF00202 Aminotransferase class-III GOQ09_23560 PF00551 Formyl transferase GOQ09_23585 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GOQ09_23585 PF00289 Biotin carboxylase, N-terminal domain GOQ09_23585 PF02785 Biotin carboxylase C-terminal domain GOQ09_23590 PF13193 AMP-binding enzyme C-terminal domain GOQ09_23590 PF00501 AMP-binding enzyme GOQ09_23595 PF00440 Bacterial regulatory proteins, tetR family GOQ09_23600 PF13458 Periplasmic binding protein GOQ09_23605 PF00175 Oxidoreductase NAD-binding domain GOQ09_23605 PF00667 FAD binding domain GOQ09_23605 PF00258 Flavodoxin GOQ09_23605 PF00067 Cytochrome P450 GOQ09_23615 PF00440 Bacterial regulatory proteins, tetR family GOQ09_23630 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain GOQ09_23630 PF06974 Protein of unknown function (DUF1298) GOQ09_23635 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain GOQ09_23635 PF00326 Prolyl oligopeptidase family GOQ09_23640 PF00491 Arginase family GOQ09_23655 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase GOQ09_23655 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain GOQ09_23660 PF00171 Aldehyde dehydrogenase family GOQ09_23660 PF01619 Proline dehydrogenase GOQ09_23660 PF18327 Proline utilization A proline dehydrogenase N-terminal domain GOQ09_23660 PF14850 DNA-binding domain of Proline dehydrogenase GOQ09_23665 PF01037 Lrp/AsnC ligand binding domain GOQ09_23670 PF02534 Type IV secretory system Conjugative DNA transfer GOQ09_23700 PF01168 Alanine racemase, N-terminal domain GOQ09_23705 PF00437 Type II/IV secretion system protein GOQ09_23710 PF00437 Type II/IV secretion system protein GOQ09_23715 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase GOQ09_23715 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase GOQ09_23725 PF13580 SIS domain GOQ09_23730 PF02021 Uncharacterised protein family UPF0102 GOQ09_23735 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GOQ09_23745 PF17287 POTRA domain GOQ09_23745 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB GOQ09_23745 PF08479 POTRA domain, ShlB-type GOQ09_23750 PF13332 Hemagglutinin repeat GOQ09_23750 PF05594 Haemagluttinin repeat GOQ09_23750 PF15526 Novel toxin 21 GOQ09_23750 PF04829 Pre-toxin domain with VENN motif GOQ09_23750 PF05860 haemagglutination activity domain GOQ09_23755 PF00196 Bacterial regulatory proteins, luxR family GOQ09_23755 PF00072 Response regulator receiver domain GOQ09_23760 PF00672 HAMP domain GOQ09_23760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GOQ09_23760 PF07730 Histidine kinase GOQ09_23785 PF07693 KAP family P-loop domain GOQ09_23795 PF08361 MAATS-type transcriptional repressor, C-terminal region GOQ09_23795 PF00440 Bacterial regulatory proteins, tetR family GOQ09_23800 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GOQ09_23800 PF00529 HlyD membrane-fusion protein of T1SS GOQ09_23805 PF00873 AcrB/AcrD/AcrF family GOQ09_23810 PF02321 Outer membrane efflux protein GOQ09_23860 PF00085 Thioredoxin GOQ09_23865 PF00270 DEAD/DEAH box helicase GOQ09_23865 PF00271 Helicase conserved C-terminal domain GOQ09_23865 PF08494 DEAD/H associated GOQ09_23870 PF04675 DNA ligase N terminus GOQ09_23870 PF04679 ATP dependent DNA ligase C terminal region GOQ09_23870 PF01068 ATP dependent DNA ligase domain GOQ09_23875 PF04675 DNA ligase N terminus GOQ09_23875 PF01068 ATP dependent DNA ligase domain GOQ09_23875 PF04679 ATP dependent DNA ligase C terminal region GOQ09_23890 PF02894 Oxidoreductase family, C-terminal alpha/beta domain GOQ09_23890 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GOQ09_23895 PF13407 Periplasmic binding protein domain GOQ09_23900 PF02653 Branched-chain amino acid transport system / permease component GOQ09_23905 PF00005 ABC transporter GOQ09_23910 PF00480 ROK family GOQ09_23910 PF01047 MarR family GOQ09_23915 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain GOQ09_23915 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain GOQ09_23920 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GOQ09_23920 PF02874 ATP synthase alpha/beta family, beta-barrel domain GOQ09_23925 PF00231 ATP synthase GOQ09_23930 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GOQ09_23930 PF00306 ATP synthase alpha/beta chain, C terminal domain GOQ09_23930 PF02874 ATP synthase alpha/beta family, beta-barrel domain GOQ09_23935 PF00213 ATP synthase delta (OSCP) subunit GOQ09_23940 PF00430 ATP synthase B/B' CF(0) GOQ09_23945 PF00137 ATP synthase subunit C GOQ09_23950 PF00119 ATP synthase A chain GOQ09_23960 PF01063 Amino-transferase class IV GOQ09_23965 PF04359 Protein of unknown function (DUF493) GOQ09_23970 PF03099 Biotin/lipoate A/B protein ligase family GOQ09_23975 PF04055 Radical SAM superfamily GOQ09_23975 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family GOQ09_23980 PF00501 AMP-binding enzyme GOQ09_23980 PF13193 AMP-binding enzyme C-terminal domain GOQ09_23985 PF03600 Citrate transporter GOQ09_24005 PF16884 N-terminal domain of oxidoreductase GOQ09_24005 PF00107 Zinc-binding dehydrogenase GOQ09_24010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GOQ09_24010 PF00672 HAMP domain GOQ09_24010 PF00512 His Kinase A (phospho-acceptor) domain GOQ09_24010 PF16750 Sensor domain of 2-component histidine kinase GOQ09_24015 PF00072 Response regulator receiver domain GOQ09_24015 PF00486 Transcriptional regulatory protein, C terminal GOQ09_24035 PF05524 PEP-utilising enzyme, N-terminal GOQ09_24035 PF00391 PEP-utilising enzyme, mobile domain GOQ09_24035 PF02896 PEP-utilising enzyme, TIM barrel domain GOQ09_24040 PF00381 PTS HPr component phosphorylation site GOQ09_24050 PF07690 Major Facilitator Superfamily GOQ09_24060 PF00578 AhpC/TSA family GOQ09_24065 PF01322 Cytochrome C' GOQ09_24080 PF08534 Redoxin GOQ09_24085 PF00366 Ribosomal protein S17 GOQ09_24090 PF00831 Ribosomal L29 protein GOQ09_24095 PF00252 Ribosomal protein L16p/L10e GOQ09_24100 PF07650 KH domain GOQ09_24100 PF00189 Ribosomal protein S3, C-terminal domain GOQ09_24105 PF00237 Ribosomal protein L22p/L17e GOQ09_24110 PF00203 Ribosomal protein S19 GOQ09_24115 PF03947 Ribosomal Proteins L2, C-terminal domain GOQ09_24115 PF00181 Ribosomal Proteins L2, RNA binding domain GOQ09_24120 PF00276 Ribosomal protein L23 GOQ09_24125 PF00573 Ribosomal protein L4/L1 family GOQ09_24130 PF00297 Ribosomal protein L3 GOQ09_24145 PF00338 Ribosomal protein S10p/S20e GOQ09_24150 PF00009 Elongation factor Tu GTP binding domain GOQ09_24150 PF03144 Elongation factor Tu domain 2 GOQ09_24150 PF03143 Elongation factor Tu C-terminal domain GOQ09_24155 PF00679 Elongation factor G C-terminus GOQ09_24155 PF03764 Elongation factor G, domain IV GOQ09_24155 PF00009 Elongation factor Tu GTP binding domain GOQ09_24155 PF14492 Elongation Factor G, domain II GOQ09_24155 PF03144 Elongation factor Tu domain 2 GOQ09_24160 PF00177 Ribosomal protein S7p/S5e GOQ09_24165 PF00164 Ribosomal protein S12/S23 GOQ09_24170 PF07943 Penicillin-binding protein 5, C-terminal domain GOQ09_24170 PF00768 D-alanyl-D-alanine carboxypeptidase GOQ09_24175 PF02129 X-Pro dipeptidyl-peptidase (S15 family) GOQ09_24195 PF00490 Delta-aminolevulinic acid dehydratase GOQ09_24200 PF01544 CorA-like Mg2+ transporter protein GOQ09_24210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_24210 PF03466 LysR substrate binding domain GOQ09_24215 PF01738 Dienelactone hydrolase family GOQ09_24220 PF01323 DSBA-like thioredoxin domain GOQ09_24230 PF01914 MarC family integral membrane protein GOQ09_24245 PF00501 AMP-binding enzyme GOQ09_24250 PF00005 ABC transporter GOQ09_24255 PF00005 ABC transporter GOQ09_24255 PF12399 Branched-chain amino acid ATP-binding cassette transporter GOQ09_24265 PF02653 Branched-chain amino acid transport system / permease component GOQ09_24275 PF07859 alpha/beta hydrolase fold GOQ09_24280 PF02222 ATP-grasp domain GOQ09_24285 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GOQ09_24285 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain GOQ09_24295 PF00144 Beta-lactamase GOQ09_24300 PF03309 Type III pantothenate kinase GOQ09_24305 PF01476 LysM domain GOQ09_24305 PF04972 BON domain GOQ09_24315 PF03480 Bacterial extracellular solute-binding protein, family 7 GOQ09_24325 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component GOQ09_24325 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component GOQ09_24330 PF00391 PEP-utilising enzyme, mobile domain GOQ09_24330 PF02896 PEP-utilising enzyme, TIM barrel domain GOQ09_24330 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain GOQ09_24340 PF07992 Pyridine nucleotide-disulphide oxidoreductase GOQ09_24340 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GOQ09_24345 PF02558 Ketopantoate reductase PanE/ApbA GOQ09_24345 PF08546 Ketopantoate reductase PanE/ApbA C terminal GOQ09_24350 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus GOQ09_24350 PF01048 Phosphorylase superfamily GOQ09_24355 PF03401 Tripartite tricarboxylate transporter family receptor GOQ09_24375 PF02798 Glutathione S-transferase, N-terminal domain GOQ09_24380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_24380 PF03466 LysR substrate binding domain GOQ09_24385 PF00005 ABC transporter GOQ09_24390 PF01061 ABC-2 type transporter GOQ09_24395 PF01047 MarR family GOQ09_24400 PF02566 OsmC-like protein GOQ09_24410 PF01636 Phosphotransferase enzyme family GOQ09_24420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GOQ09_24420 PF00183 Hsp90 protein GOQ09_24430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_24430 PF03466 LysR substrate binding domain GOQ09_24435 PF00107 Zinc-binding dehydrogenase GOQ09_24435 PF02801 Beta-ketoacyl synthase, C-terminal domain GOQ09_24435 PF08659 KR domain GOQ09_24435 PF00698 Acyl transferase domain GOQ09_24435 PF00550 Phosphopantetheine attachment site GOQ09_24435 PF14765 Polyketide synthase dehydratase GOQ09_24435 PF08240 Alcohol dehydrogenase GroES-like domain GOQ09_24435 PF16197 Ketoacyl-synthetase C-terminal extension GOQ09_24435 PF00109 Beta-ketoacyl synthase, N-terminal domain GOQ09_24440 PF00230 Major intrinsic protein GOQ09_24465 PF00512 His Kinase A (phospho-acceptor) domain GOQ09_24465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GOQ09_24465 PF08521 Two-component sensor kinase N-terminal GOQ09_24470 PF00486 Transcriptional regulatory protein, C terminal GOQ09_24470 PF00072 Response regulator receiver domain GOQ09_24480 PF01479 S4 domain GOQ09_24480 PF00849 RNA pseudouridylate synthase GOQ09_24485 PF04101 Glycosyltransferase family 28 C-terminal domain GOQ09_24485 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase GOQ09_24505 PF00072 Response regulator receiver domain GOQ09_24505 PF00486 Transcriptional regulatory protein, C terminal GOQ09_24510 PF02702 Osmosensitive K+ channel His kinase sensor domain GOQ09_24510 PF13493 Domain of unknown function (DUF4118) GOQ09_24510 PF13492 GAF domain GOQ09_24510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GOQ09_24510 PF00512 His Kinase A (phospho-acceptor) domain GOQ09_24520 PF02669 K+-transporting ATPase, c chain GOQ09_24530 PF03814 Potassium-transporting ATPase A subunit GOQ09_24545 PF02777 Iron/manganese superoxide dismutases, C-terminal domain GOQ09_24545 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain GOQ09_24555 PF03401 Tripartite tricarboxylate transporter family receptor GOQ09_24560 PF00753 Metallo-beta-lactamase superfamily GOQ09_24570 PF00106 short chain dehydrogenase GOQ09_24580 PF00027 Cyclic nucleotide-binding domain GOQ09_24580 PF13545 Crp-like helix-turn-helix domain GOQ09_24585 PF00501 AMP-binding enzyme GOQ09_24590 PF12399 Branched-chain amino acid ATP-binding cassette transporter GOQ09_24590 PF00005 ABC transporter GOQ09_24610 PF00005 ABC transporter GOQ09_24615 PF00501 AMP-binding enzyme GOQ09_24615 PF13193 AMP-binding enzyme C-terminal domain GOQ09_24625 PF00285 Citrate synthase, C-terminal domain GOQ09_24630 PF00285 Citrate synthase, C-terminal domain GOQ09_24635 PF01965 DJ-1/PfpI family GOQ09_24645 PF03401 Tripartite tricarboxylate transporter family receptor GOQ09_24650 PF13360 PQQ-like domain GOQ09_24650 PF13442 Cytochrome C oxidase, cbb3-type, subunit III GOQ09_24660 PF01011 PQQ enzyme repeat GOQ09_24665 PF01325 Iron dependent repressor, N-terminal DNA binding domain GOQ09_24665 PF00480 ROK family GOQ09_24670 PF00005 ABC transporter GOQ09_24675 PF02653 Branched-chain amino acid transport system / permease component GOQ09_24680 PF13407 Periplasmic binding protein domain GOQ09_24690 PF00497 Bacterial extracellular solute-binding proteins, family 3 GOQ09_24695 PF03466 LysR substrate binding domain GOQ09_24695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_24700 PF00676 Dehydrogenase E1 component GOQ09_24705 PF02779 Transketolase, pyrimidine binding domain GOQ09_24705 PF02780 Transketolase, C-terminal domain GOQ09_24715 PF03466 LysR substrate binding domain GOQ09_24715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_24720 PF03401 Tripartite tricarboxylate transporter family receptor GOQ09_24735 PF01494 FAD binding domain GOQ09_24745 PF00378 Enoyl-CoA hydratase/isomerase GOQ09_24750 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GOQ09_24750 PF02770 Acyl-CoA dehydrogenase, middle domain GOQ09_24750 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GOQ09_24755 PF13193 AMP-binding enzyme C-terminal domain GOQ09_24755 PF00501 AMP-binding enzyme GOQ09_24770 PF01196 Ribosomal protein L17 GOQ09_24775 PF01000 RNA polymerase Rpb3/RpoA insert domain GOQ09_24775 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain GOQ09_24775 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain GOQ09_24780 PF01479 S4 domain GOQ09_24780 PF00163 Ribosomal protein S4/S9 N-terminal domain GOQ09_24785 PF00411 Ribosomal protein S11 GOQ09_24790 PF00416 Ribosomal protein S13/S18 GOQ09_24795 PF00444 Ribosomal protein L36 GOQ09_24800 PF00344 SecY translocase GOQ09_24805 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A GOQ09_24810 PF00327 Ribosomal protein L30p/L7e GOQ09_24815 PF00333 Ribosomal protein S5, N-terminal domain GOQ09_24815 PF03719 Ribosomal protein S5, C-terminal domain GOQ09_24820 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast GOQ09_24825 PF00347 Ribosomal protein L6 GOQ09_24830 PF00410 Ribosomal protein S8 GOQ09_24835 PF00253 Ribosomal protein S14p/S29e GOQ09_24840 PF00281 Ribosomal protein L5 GOQ09_24840 PF00673 ribosomal L5P family C-terminus GOQ09_24845 PF00467 KOW motif GOQ09_24845 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 GOQ09_24850 PF00238 Ribosomal protein L14p/L23e GOQ09_24860 PF03807 NADP oxidoreductase coenzyme F420-dependent GOQ09_24860 PF14748 Pyrroline-5-carboxylate reductase dimerisation GOQ09_24865 PF01040 UbiA prenyltransferase family GOQ09_24870 PF00210 Ferritin-like domain GOQ09_24875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_24875 PF03466 LysR substrate binding domain GOQ09_24880 PF01970 Tripartite tricarboxylate transporter TctA family GOQ09_24885 PF07331 Tripartite tricarboxylate transporter TctB family GOQ09_24895 PF17191 RecG wedge domain GOQ09_24895 PF00270 DEAD/DEAH box helicase GOQ09_24895 PF00271 Helicase conserved C-terminal domain GOQ09_24900 PF02547 Queuosine biosynthesis protein GOQ09_24905 PF08450 SMP-30/Gluconolactonase/LRE-like region GOQ09_24910 PF01702 Queuine tRNA-ribosyltransferase GOQ09_24965 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family GOQ09_24980 PF00814 Glycoprotease family GOQ09_24990 PF08220 DeoR-like helix-turn-helix domain GOQ09_24990 PF00455 DeoR C terminal sensor domain GOQ09_24995 PF00293 NUDIX domain GOQ09_25000 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family GOQ09_25010 PF03481 Putative GTP-binding controlling metal-binding GOQ09_25010 PF01300 Telomere recombination GOQ09_25015 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain GOQ09_25015 PF02222 ATP-grasp domain GOQ09_25020 PF00731 AIR carboxylase GOQ09_25025 PF00085 Thioredoxin GOQ09_25030 PF01381 Helix-turn-helix GOQ09_25035 PF13657 HipA N-terminal domain GOQ09_25035 PF07804 HipA-like C-terminal domain GOQ09_25045 PF01259 SAICAR synthetase GOQ09_25050 PF01116 Fructose-bisphosphate aldolase class-II GOQ09_25055 PF01037 Lrp/AsnC ligand binding domain GOQ09_25060 PF00291 Pyridoxal-phosphate dependent enzyme GOQ09_25080 PF00224 Pyruvate kinase, barrel domain GOQ09_25080 PF02887 Pyruvate kinase, alpha/beta domain GOQ09_25085 PF00162 Phosphoglycerate kinase GOQ09_25090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_25090 PF03466 LysR substrate binding domain GOQ09_25105 PF01494 FAD binding domain GOQ09_25135 PF02911 Formyl transferase, C-terminal domain GOQ09_25135 PF00551 Formyl transferase GOQ09_25145 PF01327 Polypeptide deformylase GOQ09_25155 PF02481 DNA recombination-mediator protein A GOQ09_25155 PF17782 DprA winged helix domain GOQ09_25160 PF04361 Protein of unknown function (DUF494) GOQ09_25170 PF02355 Protein export membrane protein GOQ09_25170 PF07549 SecD/SecF GG Motif GOQ09_25175 PF13721 SecD export protein N-terminal TM region GOQ09_25175 PF02355 Protein export membrane protein GOQ09_25175 PF07549 SecD/SecF GG Motif GOQ09_25180 PF02699 Preprotein translocase subunit GOQ09_25190 PF01037 Lrp/AsnC ligand binding domain GOQ09_25195 PF00497 Bacterial extracellular solute-binding proteins, family 3 GOQ09_25200 PF00528 Binding-protein-dependent transport system inner membrane component GOQ09_25205 PF05977 Transmembrane secretion effector GOQ09_25210 PF02633 Creatinine amidohydrolase GOQ09_25215 PF00005 ABC transporter GOQ09_25220 PF00528 Binding-protein-dependent transport system inner membrane component GOQ09_25225 PF01565 FAD binding domain GOQ09_25225 PF04030 D-arabinono-1,4-lactone oxidase GOQ09_25240 PF00111 2Fe-2S iron-sulfur cluster binding domain GOQ09_25240 PF00175 Oxidoreductase NAD-binding domain GOQ09_25250 PF01042 Endoribonuclease L-PSP GOQ09_25260 PF01261 Xylose isomerase-like TIM barrel GOQ09_25265 PF00596 Class II Aldolase and Adducin N-terminal domain GOQ09_25270 PF17042 Nucleotide-binding C-terminal domain GOQ09_25270 PF07005 Sugar-binding N-terminal domain GOQ09_25275 PF01370 NAD dependent epimerase/dehydratase family GOQ09_25280 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase GOQ09_25280 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase GOQ09_25285 PF07690 Major Facilitator Superfamily GOQ09_25290 PF00392 Bacterial regulatory proteins, gntR family GOQ09_25290 PF07729 FCD domain GOQ09_25295 PF04829 Pre-toxin domain with VENN motif GOQ09_25295 PF05860 haemagglutination activity domain GOQ09_25295 PF13018 Extended Signal Peptide of Type V secretion system GOQ09_25295 PF13332 Hemagglutinin repeat GOQ09_25305 PF17287 POTRA domain GOQ09_25305 PF08479 POTRA domain, ShlB-type GOQ09_25305 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB GOQ09_25315 PF00456 Transketolase, thiamine diphosphate binding domain GOQ09_25315 PF17831 Pyruvate dehydrogenase E1 component middle domain GOQ09_25320 PF01037 Lrp/AsnC ligand binding domain GOQ09_25345 PF00196 Bacterial regulatory proteins, luxR family GOQ09_25345 PF00072 Response regulator receiver domain GOQ09_25350 PF00989 PAS fold GOQ09_25350 PF00512 His Kinase A (phospho-acceptor) domain GOQ09_25350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GOQ09_25355 PF00795 Carbon-nitrogen hydrolase GOQ09_25365 PF03710 Glutamate-ammonia ligase adenylyltransferase GOQ09_25365 PF08335 GlnD PII-uridylyltransferase GOQ09_25370 PF03330 Lytic transglycolase GOQ09_25370 PF05036 Sporulation related domain GOQ09_25375 PF02627 Carboxymuconolactone decarboxylase family GOQ09_25380 PF04542 Sigma-70 region 2 GOQ09_25380 PF12680 SnoaL-like domain GOQ09_25380 PF08281 Sigma-70, region 4 GOQ09_25390 PF00255 Glutathione peroxidase GOQ09_25395 PF00043 Glutathione S-transferase, C-terminal domain GOQ09_25395 PF13417 Glutathione S-transferase, N-terminal domain GOQ09_25400 PF08328 Adenylosuccinate lyase C-terminal GOQ09_25400 PF00206 Lyase GOQ09_25410 PF07715 TonB-dependent Receptor Plug Domain GOQ09_25410 PF00593 TonB dependent receptor GOQ09_25410 PF07660 Secretin and TonB N terminus short domain GOQ09_25415 PF07152 YaeQ protein GOQ09_25430 PF03741 Integral membrane protein TerC family GOQ09_25440 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV GOQ09_25445 PF13181 Tetratricopeptide repeat GOQ09_25445 PF01435 Peptidase family M48 GOQ09_25450 PF01967 MoaC family GOQ09_25460 PF00114 Pilin (bacterial filament) GOQ09_25460 PF07963 Prokaryotic N-terminal methylation motif GOQ09_25465 PF05567 Neisseria PilC beta-propeller domain GOQ09_25500 PF07963 Prokaryotic N-terminal methylation motif GOQ09_25500 PF00114 Pilin (bacterial filament) GOQ09_25510 PF00211 Adenylate and Guanylate cyclase catalytic domain GOQ09_25515 PF00498 FHA domain GOQ09_25525 PF03741 Integral membrane protein TerC family GOQ09_25530 PF02629 CoA binding domain GOQ09_25530 PF00549 CoA-ligase GOQ09_25535 PF08442 ATP-grasp domain GOQ09_25535 PF00549 CoA-ligase GOQ09_25540 PF01118 Semialdehyde dehydrogenase, NAD binding domain GOQ09_25550 PF02631 RecX family GOQ09_25555 PF00154 recA bacterial DNA recombination protein GOQ09_25565 PF00072 Response regulator receiver domain GOQ09_25565 PF00486 Transcriptional regulatory protein, C terminal GOQ09_25570 PF00512 His Kinase A (phospho-acceptor) domain GOQ09_25570 PF08521 Two-component sensor kinase N-terminal GOQ09_25570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GOQ09_25580 PF02237 Biotin protein ligase C terminal domain GOQ09_25580 PF03099 Biotin/lipoate A/B protein ligase family GOQ09_25580 PF08279 HTH domain GOQ09_25590 PF01131 DNA topoisomerase GOQ09_25590 PF01751 Toprim domain GOQ09_25595 PF03466 LysR substrate binding domain GOQ09_25595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_25600 PF03401 Tripartite tricarboxylate transporter family receptor GOQ09_25615 PF07722 Peptidase C26 GOQ09_25630 PF01176 Translation initiation factor 1A / IF-1 GOQ09_25635 PF00271 Helicase conserved C-terminal domain GOQ09_25635 PF03880 DbpA RNA binding domain GOQ09_25635 PF00270 DEAD/DEAH box helicase GOQ09_25645 PF00892 EamA-like transporter family GOQ09_25655 PF07729 FCD domain GOQ09_25655 PF00392 Bacterial regulatory proteins, gntR family GOQ09_25660 PF07992 Pyridine nucleotide-disulphide oxidoreductase GOQ09_25660 PF17806 Sarcosine oxidase A3 domain GOQ09_25670 PF01266 FAD dependent oxidoreductase GOQ09_25675 PF05544 Proline racemase GOQ09_25680 PF13458 Periplasmic binding protein GOQ09_25685 PF00701 Dihydrodipicolinate synthetase family GOQ09_25690 PF13657 HipA N-terminal domain GOQ09_25690 PF07804 HipA-like C-terminal domain GOQ09_25700 PF03401 Tripartite tricarboxylate transporter family receptor GOQ09_25705 PF07687 Peptidase dimerisation domain GOQ09_25705 PF01546 Peptidase family M20/M25/M40 GOQ09_25710 PF02678 Pirin GOQ09_25710 PF05726 Pirin C-terminal cupin domain GOQ09_25720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_25720 PF03466 LysR substrate binding domain GOQ09_25735 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GOQ09_25755 PF02678 Pirin GOQ09_25755 PF05726 Pirin C-terminal cupin domain GOQ09_25765 PF16485 Protealysin propeptide GOQ09_25765 PF01447 Thermolysin metallopeptidase, catalytic domain GOQ09_25765 PF02868 Thermolysin metallopeptidase, alpha-helical domain GOQ09_25775 PF01566 Natural resistance-associated macrophage protein GOQ09_25780 PF03992 Antibiotic biosynthesis monooxygenase GOQ09_25795 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain GOQ09_25795 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain GOQ09_25805 PF02779 Transketolase, pyrimidine binding domain GOQ09_25805 PF02780 Transketolase, C-terminal domain GOQ09_25805 PF00456 Transketolase, thiamine diphosphate binding domain GOQ09_25810 PF02675 S-adenosylmethionine decarboxylase GOQ09_25815 PF00483 Nucleotidyl transferase GOQ09_25820 PF00557 Metallopeptidase family M24 GOQ09_25820 PF05195 Aminopeptidase P, N-terminal domain GOQ09_25825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GOQ09_25825 PF03466 LysR substrate binding domain GOQ09_25880 PF01515 Phosphate acetyl/butaryl transferase GOQ09_25880 PF00390 Malic enzyme, N-terminal domain GOQ09_25880 PF03949 Malic enzyme, NAD binding domain GOQ09_25885 PF00545 ribonuclease GOQ09_25895 PF00398 Ribosomal RNA adenine dimethylase GOQ09_25900 PF09312 SurA N-terminal domain GOQ09_25900 PF00639 PPIC-type PPIASE domain GOQ09_25905 PF04453 LPS transport system D GOQ09_25910 PF01636 Phosphotransferase enzyme family GOQ09_25915 PF04452 RNA methyltransferase GOQ09_25930 PF07690 Major Facilitator Superfamily GOQ09_25935 PF12146 Serine aminopeptidase, S33 GOQ09_25955 PF00027 Cyclic nucleotide-binding domain GOQ09_25955 PF00520 Ion transport protein GOQ09_25960 PF01205 Uncharacterized protein family UPF0029 GOQ09_25960 PF09186 Domain of unknown function (DUF1949) GOQ09_25965 PF08241 Methyltransferase domain GOQ09_25970 PF00561 alpha/beta hydrolase fold GOQ09_25975 PF01169 Uncharacterized protein family UPF0016 GOQ09_25980 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) GOQ09_25985 PF00106 short chain dehydrogenase GOQ09_26000 PF01380 SIS domain GOQ09_26000 PF00571 CBS domain GOQ09_26005 PF02254 TrkA-N domain GOQ09_26005 PF02080 TrkA-C domain GOQ09_26005 PF00999 Sodium/hydrogen exchanger family GOQ09_26020 PF10396 GTP-binding protein TrmE N-terminus GOQ09_26020 PF01926 50S ribosome-binding GTPase GOQ09_26020 PF12631 MnmE helical domain GOQ09_26025 PF14849 YidC periplasmic domain GOQ09_26025 PF02096 60Kd inner membrane protein GOQ09_26030 PF01809 Putative membrane protein insertion efficiency factor GOQ09_26035 PF00825 Ribonuclease P GOQ09_26040 PF00468 Ribosomal protein L34