locus-tag	class	description
GOQ09_00005	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
GOQ09_00015	COG0187	DNA topoisomerase II activity
GOQ09_00030	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
GOQ09_00030	COG2885	chlorophyll binding
GOQ09_00055	COG1408	metallophosphoesterase
GOQ09_00065	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
GOQ09_00070	COG0392	lysyltransferase activity
GOQ09_00075	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
GOQ09_00080	COG3568	Endonuclease Exonuclease Phosphatase
GOQ09_00110	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
GOQ09_00130	COG4452	Inner membrane protein CreD
GOQ09_00145	COG2205	protein histidine kinase activity
GOQ09_00150	COG0745	RESPONSE REGULATOR receiver
GOQ09_00165	COG2608	mercury ion transmembrane transporter activity
GOQ09_00170	COG2217	Heavy metal translocating P-type atpase
GOQ09_00175	COG0456	acetyltransferase
GOQ09_00180	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
GOQ09_00185	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
GOQ09_00195	COG0745	RESPONSE REGULATOR receiver
GOQ09_00210	COG1902	pentaerythritol trinitrate reductase activity
GOQ09_00220	COG1024	Enoyl-CoA hydratase
GOQ09_00240	COG0445	tRNA wobble uridine modification
GOQ09_00245	COG0357	Ribosomal RNA small subunit methyltransferase G
GOQ09_00255	COG1192	Involved in chromosome partitioning
GOQ09_00265	COG1475	DNA binding
GOQ09_00275	COG0277	FAD linked oxidase domain protein
GOQ09_00285	COG2096	Adenosyltransferase
GOQ09_00320	COG0583	DNA-binding transcription factor activity
GOQ09_00335	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
GOQ09_00340	COG2894	cell division
GOQ09_00345	COG0850	regulation of cytokinetic process
GOQ09_00350	COG2233	PERMEase
GOQ09_00355	COG2050	protein possibly involved in aromatic compounds catabolism
GOQ09_00365	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
GOQ09_00375	COG0477	Major facilitator Superfamily
GOQ09_00390	COG1250	3-hydroxyacyl-CoA dehydrogenase
GOQ09_00400	COG3246	L-lysine catabolic process to acetate
GOQ09_00410	COG1942	4-Oxalocrotonate Tautomerase
GOQ09_00415	COG1028	Short-chain dehydrogenase reductase Sdr
GOQ09_00430	COG2207	Transcriptional regulator
GOQ09_00440	COG0411	ABC transporter
GOQ09_00460	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
GOQ09_00480	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
GOQ09_00525	COG0492	ferredoxin-NADP+ reductase activity
GOQ09_00540	COG1878	Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation
GOQ09_00545	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
GOQ09_00550	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
GOQ09_00555	COG1116	anion transmembrane transporter activity
GOQ09_00555	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
GOQ09_00570	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
GOQ09_00575	COG2114	Pfam Adenylate and Guanylate cyclase catalytic domain
GOQ09_00585	COG1950	PFAM Membrane protein of
GOQ09_00590	COG0583	DNA-binding transcription factor activity
GOQ09_00595	COG1960	acyl-CoA dehydrogenase activity
GOQ09_00600	COG1804	L-carnitine dehydratase bile acid-inducible protein F
GOQ09_00630	COG1573	uracil-dna glycosylase
GOQ09_00645	COG0583	DNA-binding transcription factor activity
GOQ09_00650	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
GOQ09_00660	COG2066	Belongs to the glutaminase family
GOQ09_00670	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
GOQ09_00690	COG0183	Belongs to the thiolase family
GOQ09_00700	COG0700	Nucleoside recognition
GOQ09_00705	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
GOQ09_00725	COG1274	phosphoenolpyruvate carboxykinase (GTP) activity
GOQ09_00730	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
GOQ09_00735	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
GOQ09_00760	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
GOQ09_00765	COG1116	anion transmembrane transporter activity
GOQ09_00775	COG2986	histidine ammonia-lyase
GOQ09_00780	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
GOQ09_00805	COG1228	amidohydrolase
GOQ09_00810	COG0402	S-adenosylhomocysteine deaminase activity
GOQ09_00830	COG0583	DNA-binding transcription factor activity
GOQ09_00840	COG1410	methionine synthase
GOQ09_00840	COG0646	methionine synthase
GOQ09_00865	COG1309	transcriptional regulator
GOQ09_00905	COG0411	ABC transporter
GOQ09_00915	COG1335	isochorismatase
GOQ09_00925	COG2080	2 iron, 2 sulfur cluster binding
GOQ09_00930	COG1529	Aldehyde oxidase and xanthine dehydrogenase
GOQ09_00930	COG2010	Cytochrome c
GOQ09_00935	COG0596	Alpha beta hydrolase
GOQ09_00945	COG2207	Transcriptional regulator
GOQ09_00950	COG0583	DNA-binding transcription factor activity
GOQ09_00960	COG1228	amidohydrolase
GOQ09_00965	COG1335	isochorismatase
GOQ09_00990	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
GOQ09_01120	COG0515	serine threonine protein kinase
GOQ09_01120	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
GOQ09_01140	COG0347	Belongs to the P(II) protein family
GOQ09_01145	COG0004	ammonium transporteR
GOQ09_01155	COG0583	DNA-binding transcription factor activity
GOQ09_01160	COG0277	FAD linked oxidase domain protein
GOQ09_01165	COG0277	FAD linked oxidase domain protein
GOQ09_01170	COG0247	lactate metabolic process
GOQ09_01180	COG0386	Belongs to the glutathione peroxidase family
GOQ09_01190	COG0477	Major facilitator Superfamily
GOQ09_01195	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
GOQ09_01210	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
GOQ09_01225	COG0129	dihydroxy-acid dehydratase activity
GOQ09_01235	COG3971	2-oxopent-4-enoate hydratase activity
GOQ09_01255	COG1012	belongs to the aldehyde dehydrogenase family
GOQ09_01275	COG1846	Transcriptional regulator
GOQ09_01295	COG2974	May be involved in recombination
GOQ09_01315	COG2205	protein histidine kinase activity
GOQ09_01325	COG0579	oxidoreductase
GOQ09_01340	COG2211	Major facilitator Superfamily
GOQ09_01355	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
GOQ09_01360	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
GOQ09_01390	COG1335	isochorismatase
GOQ09_01410	COG0708	Exodeoxyribonuclease III
GOQ09_01415	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
GOQ09_01425	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
GOQ09_01430	COG0154	amidase activity
GOQ09_01435	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
GOQ09_01440	COG1077	Cell shape determining protein MreB Mrl
GOQ09_01455	COG0768	penicillin binding
GOQ09_01460	COG0179	Fumarylacetoacetate (FAA) hydrolase
GOQ09_01465	COG3508	Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate
GOQ09_01475	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
GOQ09_01490	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
GOQ09_01510	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
GOQ09_01515	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
GOQ09_01520	COG0583	DNA-binding transcription factor activity
GOQ09_01535	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
GOQ09_01550	COG1177	transmembrane transport
GOQ09_01555	COG1176	ABC-type spermidine putrescine transport system, permease component I
GOQ09_01560	COG3842	ATPase activity
GOQ09_01575	COG1012	belongs to the aldehyde dehydrogenase family
GOQ09_01590	COG0028	Belongs to the TPP enzyme family
GOQ09_01620	COG0724	RNA recognition motif
GOQ09_01630	COG0023	Translation Initiation Factor
GOQ09_01635	COG0513	Belongs to the DEAD box helicase family
GOQ09_01640	COG1960	acyl-CoA dehydrogenase activity
GOQ09_01645	COG1960	acyl-CoA dehydrogenase activity
GOQ09_01660	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
GOQ09_01675	COG2877	3-deoxy-8-phosphooctulonate synthase activity
GOQ09_01830	COG3708	Transcriptional regulator
GOQ09_01830	COG2207	Transcriptional regulator
GOQ09_01840	COG2733	membrane
GOQ09_01845	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
GOQ09_01850	COG0584	glycerophosphoryl diester phosphodiesterase
GOQ09_01855	COG1473	amidohydrolase
GOQ09_01870	COG0243	molybdopterin cofactor binding
GOQ09_01885	COG1028	Short-chain dehydrogenase reductase Sdr
GOQ09_01890	COG1070	Carbohydrate kinase
GOQ09_01895	COG1063	alcohol dehydrogenase
GOQ09_01900	COG1172	Belongs to the binding-protein-dependent transport system permease family
GOQ09_01910	COG1879	ABC-type sugar transport system periplasmic component
GOQ09_01915	COG2207	Transcriptional regulator
GOQ09_01920	COG1804	L-carnitine dehydratase bile acid-inducible protein F
GOQ09_01965	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
GOQ09_01975	COG3181	Tripartite tricarboxylate transporter family receptor
GOQ09_01980	COG0446	pyridine nucleotide-disulphide oxidoreductase
GOQ09_01985	COG1946	Acyl-CoA thioesterase
GOQ09_01990	COG1028	Short-chain dehydrogenase reductase Sdr
GOQ09_01995	COG0659	secondary active sulfate transmembrane transporter activity
GOQ09_02000	COG0410	ABC transporter
GOQ09_02005	COG0411	ABC transporter
GOQ09_02040	COG0667	Aldo Keto reductase
GOQ09_02045	COG1172	Belongs to the binding-protein-dependent transport system permease family
GOQ09_02065	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
GOQ09_02100	COG0629	single-stranded DNA binding
GOQ09_02130	COG4585	Histidine kinase
GOQ09_02135	COG0217	transcriptional regulatory protein
GOQ09_02150	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
GOQ09_02155	COG0482	sulfurtransferase activity
GOQ09_02170	COG0745	RESPONSE REGULATOR receiver
GOQ09_02175	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
GOQ09_02180	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
GOQ09_02185	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
GOQ09_02190	COG0318	PFAM AMP-dependent synthetase and ligase
GOQ09_02195	COG0601	transmembrane transport
GOQ09_02200	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
GOQ09_02205	COG0444	Belongs to the ABC transporter superfamily
GOQ09_02210	COG4608	Belongs to the ABC transporter superfamily
GOQ09_02215	COG0747	negative chemotaxis
GOQ09_02220	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
GOQ09_02225	COG0598	Magnesium transport protein CorA
GOQ09_02235	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
GOQ09_02245	COG1493	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
GOQ09_02250	COG0735	belongs to the Fur family
GOQ09_02255	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
GOQ09_02275	COG0058	SHG alpha-glucan phosphorylase activity
GOQ09_02280	COG0297	glycogen (starch) synthase activity
GOQ09_02285	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
GOQ09_02290	COG1523	belongs to the glycosyl hydrolase 13 family
GOQ09_02295	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
GOQ09_02300	COG0366	Alpha amylase catalytic
GOQ09_02305	COG2072	flavoprotein involved in K transport
GOQ09_02330	COG0495	leucyl-tRNA aminoacylation
GOQ09_02345	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
GOQ09_02355	COG3158	transport of potassium into the cell
GOQ09_02370	COG3135	benzoate transporter
GOQ09_02375	COG0189	ligase activity
GOQ09_02390	COG0121	glutamine amidotransferase
GOQ09_02400	COG2814	Major facilitator Superfamily
GOQ09_02415	COG0205	6-phosphofructokinase activity
GOQ09_02425	COG1024	Enoyl-CoA hydratase
GOQ09_02430	COG0183	Belongs to the thiolase family
GOQ09_02440	COG0583	DNA-binding transcription factor activity
GOQ09_02445	COG2335	COG2335, Secreted and surface protein containing fasciclin-like repeats
GOQ09_02465	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
GOQ09_02475	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
GOQ09_02480	COG1804	L-carnitine dehydratase bile acid-inducible protein F
GOQ09_02505	COG0018	arginyl-trna synthetase
GOQ09_02515	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
GOQ09_02520	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
GOQ09_02525	COG1137	ATPase activity
GOQ09_02530	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
GOQ09_02560	COG0069	glutamate synthase activity
GOQ09_02565	COG0653	protein targeting
GOQ09_02585	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
GOQ09_02595	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
GOQ09_02605	COG0583	DNA-binding transcription factor activity
GOQ09_02625	COG1335	isochorismatase
GOQ09_02635	COG2170	ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity
GOQ09_02645	COG2967	ApaG domain
GOQ09_02650	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
GOQ09_02705	COG5002	protein histidine kinase activity
GOQ09_02715	COG2198	Histidine kinase
GOQ09_02715	COG0784	Response regulator, receiver
GOQ09_02715	COG2205	protein histidine kinase activity
GOQ09_02720	COG3221	ABC-type phosphate phosphonate transport system periplasmic component
GOQ09_02725	COG3221	ABC-type phosphate phosphonate transport system periplasmic component
GOQ09_02750	COG0515	serine threonine protein kinase
GOQ09_02805	COG3501	Rhs element vgr protein
GOQ09_02830	COG3501	Rhs element vgr protein
GOQ09_02960	COG0546	phosphoglycolate phosphatase activity
GOQ09_02980	COG0512	Glutamine amidotransferase of anthranilate synthase
GOQ09_02995	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
GOQ09_03000	COG0134	indole-3-glycerol-phosphate synthase activity
GOQ09_03005	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
GOQ09_03025	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
GOQ09_03045	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
GOQ09_03050	COG0081	regulation of translation
GOQ09_03055	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
GOQ09_03060	COG0222	ribosome binding
GOQ09_03065	COG0085	RNA polymerase activity
GOQ09_03070	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
GOQ09_03090	COG5000	phosphorelay sensor kinase activity
GOQ09_03095	COG2204	response regulator
GOQ09_03110	COG0251	oxidation-reduction process
GOQ09_03120	COG1846	Transcriptional regulator
GOQ09_03140	COG2853	Lipoprotein
GOQ09_03160	COG5002	protein histidine kinase activity
GOQ09_03165	COG0745	RESPONSE REGULATOR receiver
GOQ09_03175	COG0840	transmembrane signaling receptor activity
GOQ09_03195	COG1028	Short-chain dehydrogenase reductase Sdr
GOQ09_03210	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
GOQ09_03240	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
GOQ09_03255	COG0459	protein refolding
GOQ09_03260	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
GOQ09_03270	COG0438	transferase activity, transferring glycosyl groups
GOQ09_03295	COG1271	oxidase subunit
GOQ09_03300	COG1294	oxidase, subunit
GOQ09_03320	COG0154	amidase activity
GOQ09_03335	COG0776	regulation of translation
GOQ09_03340	COG0583	DNA-binding transcription factor activity
GOQ09_03355	COG5002	protein histidine kinase activity
GOQ09_03355	COG5001	Diguanylate cyclase
GOQ09_03355	COG3447	MASE1 domain protein
GOQ09_03360	COG2205	protein histidine kinase activity
GOQ09_03380	COG0210	DNA helicase
GOQ09_03385	COG0679	Auxin Efflux Carrier
GOQ09_03400	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
GOQ09_03405	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
GOQ09_03415	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
GOQ09_03420	COG4232	protein-disulfide reductase activity
GOQ09_03445	COG0583	DNA-binding transcription factor activity
GOQ09_03450	COG1028	Short-chain dehydrogenase reductase Sdr
GOQ09_03460	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
GOQ09_03475	COG0384	phenazine biosynthesis protein PhzF
GOQ09_03480	COG0625	glutathione transferase activity
GOQ09_03485	COG1280	lysine exporter protein (LysE YggA)
GOQ09_03495	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
GOQ09_03500	COG0697	spore germination
GOQ09_03525	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
GOQ09_03595	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
GOQ09_03600	COG1045	serine acetyltransferase
GOQ09_03610	COG1089	Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
GOQ09_03630	COG0836	Belongs to the mannose-6-phosphate isomerase type 2 family
GOQ09_03630	COG0662	Cupin 2, conserved barrel domain protein
GOQ09_03635	COG0438	transferase activity, transferring glycosyl groups
GOQ09_03635	COG1216	Glycosyl transferase, family 2
GOQ09_03640	COG1215	transferase activity, transferring glycosyl groups
GOQ09_03655	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
GOQ09_03670	COG0753	catalase activity
GOQ09_03690	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
GOQ09_03695	COG2721	sulfolactate sulfo-lyase activity
GOQ09_03700	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
GOQ09_03710	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
GOQ09_03715	COG2186	Transcriptional regulator
GOQ09_03720	COG1028	Short-chain dehydrogenase reductase Sdr
GOQ09_03725	COG1028	Short-chain dehydrogenase reductase Sdr
GOQ09_03730	COG0179	Fumarylacetoacetate (FAA) hydrolase
GOQ09_03735	COG0583	DNA-binding transcription factor activity
GOQ09_03740	COG4221	oxidoreductase activity
GOQ09_03750	COG1960	acyl-CoA dehydrogenase activity
GOQ09_03760	COG1250	3-hydroxyacyl-CoA dehydrogenase
GOQ09_03760	COG1024	Enoyl-CoA hydratase
GOQ09_03765	COG2852	Protein conserved in bacteria
GOQ09_03770	COG0183	Belongs to the thiolase family
GOQ09_03795	COG1024	Enoyl-CoA hydratase
GOQ09_03800	COG1607	acyl-coa hydrolase
GOQ09_03805	COG5265	(ABC) transporter
GOQ09_03810	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
GOQ09_03815	COG0154	amidase activity
GOQ09_03820	COG0583	DNA-binding transcription factor activity
GOQ09_03825	COG1027	Aspartate ammonia-lyase
GOQ09_03835	COG0765	amino acid transport
GOQ09_03840	COG0765	amino acid transport
GOQ09_03845	COG1126	abc transporter atp-binding protein
GOQ09_03855	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
GOQ09_03865	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
GOQ09_03875	COG0318	PFAM AMP-dependent synthetase and ligase
GOQ09_03885	COG1804	L-carnitine dehydratase bile acid-inducible protein F
GOQ09_03890	COG1024	Enoyl-CoA hydratase
GOQ09_03895	COG1960	acyl-CoA dehydrogenase activity
GOQ09_03900	COG1960	acyl-CoA dehydrogenase activity
GOQ09_03905	COG1250	3-hydroxyacyl-CoA dehydrogenase
GOQ09_03905	COG1024	Enoyl-CoA hydratase
GOQ09_03910	COG0583	DNA-binding transcription factor activity
GOQ09_03925	COG1573	uracil-dna glycosylase
GOQ09_03935	COG0154	amidase activity
GOQ09_03945	COG4608	Belongs to the ABC transporter superfamily
GOQ09_03950	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
GOQ09_03960	COG0747	negative chemotaxis
GOQ09_03965	COG0418	dihydroorotase activity
GOQ09_03980	COG0501	Belongs to the peptidase M48B family
GOQ09_03995	COG3109	RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities
GOQ09_04000	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
GOQ09_04005	COG2509	5-formyltetrahydrofolate cyclo-ligase activity
GOQ09_04025	COG1187	pseudouridine synthase activity
GOQ09_04030	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
GOQ09_04045	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
GOQ09_04050	COG3383	formate dehydrogenase (NAD+) activity
GOQ09_04080	COG2318	DinB family
GOQ09_04145	COG2814	Major facilitator Superfamily
GOQ09_04155	COG0662	Cupin 2, conserved barrel domain protein
GOQ09_04155	COG2207	Transcriptional regulator
GOQ09_04180	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
GOQ09_04230	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
GOQ09_04255	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
GOQ09_04275	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
GOQ09_04280	COG0523	cobalamin synthesis protein
GOQ09_04295	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
GOQ09_04305	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
GOQ09_04310	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
GOQ09_04315	COG2001	Belongs to the MraZ family
GOQ09_04320	COG0275	rRNA processing
GOQ09_04325	COG3116	cell division
GOQ09_04335	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
GOQ09_04340	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
GOQ09_04345	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
GOQ09_04350	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
GOQ09_04355	COG0772	Belongs to the SEDS family
GOQ09_04360	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
GOQ09_04365	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
GOQ09_04370	COG1181	Belongs to the D-alanine--D-alanine ligase family
GOQ09_04375	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
GOQ09_04390	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
GOQ09_04395	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
GOQ09_04400	COG0575	Belongs to the CDS family
GOQ09_04415	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
GOQ09_04420	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
GOQ09_04435	COG3150	esterase
GOQ09_04440	COG2197	response regulator
GOQ09_04450	COG0772	Belongs to the SEDS family
GOQ09_04455	COG0312	modulator of DNA gyrase
GOQ09_04465	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
GOQ09_04475	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
GOQ09_04490	COG0511	ligase activity, forming carbon-carbon bonds
GOQ09_04495	COG0439	Biotin carboxylase
GOQ09_04500	COG2264	protein methyltransferase activity
GOQ09_04520	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
GOQ09_04555	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
GOQ09_04570	COG2204	response regulator
GOQ09_04580	COG2205	protein histidine kinase activity
GOQ09_04585	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
GOQ09_04600	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
GOQ09_04615	COG0037	tRNA processing
GOQ09_04625	COG1028	Short-chain dehydrogenase reductase Sdr
GOQ09_04635	COG2175	clavaminate synthase activity
GOQ09_04670	COG0380	Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor
GOQ09_04675	COG3387	PFAM Glycoside hydrolase 15-related
GOQ09_04685	COG0617	tRNA 3'-terminal CCA addition
GOQ09_04695	COG0625	glutathione transferase activity
GOQ09_04700	COG1285	pathogenesis
GOQ09_04705	COG0741	lytic transglycosylase activity
GOQ09_04710	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
GOQ09_04715	COG0583	DNA-binding transcription factor activity
GOQ09_04730	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
GOQ09_04740	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
GOQ09_04745	COG1522	sequence-specific DNA binding
GOQ09_04750	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
GOQ09_04780	COG0366	Alpha amylase catalytic
GOQ09_04785	COG0456	acetyltransferase
GOQ09_04785	COG0454	-acetyltransferase
GOQ09_04845	COG0583	DNA-binding transcription factor activity
GOQ09_04850	COG1741	Belongs to the pirin family
GOQ09_04855	COG1335	isochorismatase
GOQ09_04865	COG1574	metal-dependent hydrolase with the TIM-barrel fold
GOQ09_04900	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
GOQ09_04920	COG2197	response regulator
GOQ09_04980	COG1529	Aldehyde oxidase and xanthine dehydrogenase
GOQ09_04985	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
GOQ09_04990	COG2080	2 iron, 2 sulfur cluster binding
GOQ09_04995	COG2207	Transcriptional regulator
GOQ09_05010	COG0583	DNA-binding transcription factor activity
GOQ09_05015	COG1804	L-carnitine dehydratase bile acid-inducible protein F
GOQ09_05020	COG3485	protocatechuate 3,4-dioxygenase
GOQ09_05035	COG3181	Tripartite tricarboxylate transporter family receptor
GOQ09_05040	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
GOQ09_05045	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
GOQ09_05050	COG3842	ATPase activity
GOQ09_05060	COG1176	ABC-type spermidine putrescine transport system, permease component I
GOQ09_05075	COG1012	belongs to the aldehyde dehydrogenase family
GOQ09_05085	COG1960	acyl-CoA dehydrogenase activity
GOQ09_05105	COG3485	protocatechuate 3,4-dioxygenase
GOQ09_05115	COG2814	Major facilitator Superfamily
GOQ09_05120	COG0501	Belongs to the peptidase M48B family
GOQ09_05135	COG2155	Conserved Protein
GOQ09_05140	COG0596	Alpha beta hydrolase
GOQ09_05165	COG1506	peptidase
GOQ09_05165	COG0823	Involved in the tonB-independent uptake of proteins
GOQ09_05165	COG4946	Tricorn protease homolog
GOQ09_05175	COG3546	catalase activity
GOQ09_05180	COG3634	alkyl hydroperoxide reductase activity
GOQ09_05195	COG1132	(ABC) transporter
GOQ09_05205	COG0514	ATP-dependent DNA helicase (RecQ)
GOQ09_05210	COG2951	lytic endotransglycosylase activity
GOQ09_05245	COG3386	PFAM SMP-30 Gluconolaconase
GOQ09_05250	COG1028	Short-chain dehydrogenase reductase Sdr
GOQ09_05265	COG1879	ABC-type sugar transport system periplasmic component
GOQ09_05270	COG4213	ABC transporter substrate-binding protein
GOQ09_05280	COG4214	carbohydrate transport
GOQ09_05285	COG1129	ABC transporter
GOQ09_05290	COG1172	Belongs to the binding-protein-dependent transport system permease family
GOQ09_05295	COG1172	Belongs to the binding-protein-dependent transport system permease family
GOQ09_05325	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
GOQ09_05325	COG0189	ligase activity
GOQ09_05330	COG0189	ligase activity
GOQ09_05330	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
GOQ09_05335	COG1132	(ABC) transporter
GOQ09_05345	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
GOQ09_05350	COG4178	(ABC) transporter
GOQ09_05360	COG1840	ABC-type Fe3 transport system, periplasmic component
GOQ09_05365	COG3842	ATPase activity
GOQ09_05375	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
GOQ09_05375	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
GOQ09_05380	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
GOQ09_05385	COG2271	Major facilitator Superfamily
GOQ09_05470	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
GOQ09_05485	COG1765	OsmC-like protein
GOQ09_05490	COG2941	Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol
GOQ09_05510	COG4166	transmembrane transport
GOQ09_05515	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
GOQ09_05520	COG0444	Belongs to the ABC transporter superfamily
GOQ09_05525	COG4608	Belongs to the ABC transporter superfamily
GOQ09_05530	COG3384	dioxygenase
GOQ09_05535	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
GOQ09_05540	COG1840	ABC-type Fe3 transport system, periplasmic component
GOQ09_05550	COG3842	ATPase activity
GOQ09_05565	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
GOQ09_05570	COG0166	Belongs to the GPI family
GOQ09_05595	COG1175	transmembrane transport
GOQ09_05600	COG0395	ABC-type sugar transport system, permease component
GOQ09_05605	COG3842	ATPase activity
GOQ09_05610	COG0246	Mannitol dehydrogenase
GOQ09_05620	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
GOQ09_05630	COG2207	Transcriptional regulator
GOQ09_05630	COG4753	response regulator
GOQ09_05635	COG1070	Carbohydrate kinase
GOQ09_05640	COG0459	protein refolding
GOQ09_05645	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
GOQ09_05665	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
GOQ09_05670	COG4774	siderophore transport
GOQ09_05690	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
GOQ09_05700	COG1560	Kdo2-lipid A biosynthetic process
GOQ09_05710	COG0218	Necessary for normal cell division and for the maintenance of normal septation
GOQ09_05720	COG1333	cytochrome c biogenesis protein
GOQ09_05725	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
GOQ09_05730	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
GOQ09_05735	COG2717	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain
GOQ09_05740	COG0019	diaminopimelate decarboxylase activity
GOQ09_05750	COG1965	Belongs to the frataxin family
GOQ09_05785	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
GOQ09_05790	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
GOQ09_05795	COG0232	Belongs to the dGTPase family. Type 2 subfamily
GOQ09_05820	COG0067	glutamate synthase
GOQ09_05820	COG0069	glutamate synthase activity
GOQ09_05820	COG0070	glutamate synthase
GOQ09_05830	COG1127	ABC transporter
GOQ09_05835	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
GOQ09_05840	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
GOQ09_05845	COG2853	Lipoprotein
GOQ09_05860	COG1131	(ABC) transporter
GOQ09_05865	COG0842	Transport permease protein
GOQ09_05870	COG5007	Belongs to the BolA IbaG family
GOQ09_05875	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
GOQ09_05880	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
GOQ09_05905	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
GOQ09_05910	COG0131	Imidazoleglycerol-phosphate dehydratase
GOQ09_05920	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
GOQ09_05925	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
GOQ09_05935	COG1301	dicarboxylic acid transport
GOQ09_05945	COG0107	imidazoleglycerol-phosphate synthase activity
GOQ09_05950	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
GOQ09_05955	COG0140	phosphoribosyl-ATP diphosphatase activity
GOQ09_05965	COG0537	adenosine 5'-monophosphoramidase activity
GOQ09_05970	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
GOQ09_05975	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
GOQ09_05980	COG0805	protein transport
GOQ09_05995	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
GOQ09_06000	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
GOQ09_06005	COG1970	mechanosensitive ion channel activity
GOQ09_06015	COG1596	polysaccharide export
GOQ09_06055	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
GOQ09_06070	COG0723	plastoquinol--plastocyanin reductase activity
GOQ09_06075	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
GOQ09_06080	COG2857	Cytochrome c1
GOQ09_06085	COG0625	glutathione transferase activity
GOQ09_06090	COG2969	positive regulation of protein catabolic process
GOQ09_06105	COG1028	Short-chain dehydrogenase reductase Sdr
GOQ09_06110	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
GOQ09_06120	COG4591	ABC-type transport system involved in lipoprotein release permease component
GOQ09_06125	COG1136	(ABC) transporter
GOQ09_06130	COG0740	serine-type endopeptidase activity
GOQ09_06145	COG0601	transmembrane transport
GOQ09_06175	COG3653	N-Acyl-D-aspartate D-glutamate deacylase
GOQ09_06180	COG1012	belongs to the aldehyde dehydrogenase family
GOQ09_06185	COG0410	ABC transporter
GOQ09_06200	COG0559	Belongs to the binding-protein-dependent transport system permease family
GOQ09_06215	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
GOQ09_06230	COG1028	Short-chain dehydrogenase reductase Sdr
GOQ09_06235	COG2030	dehydratase
GOQ09_06235	COG1012	belongs to the aldehyde dehydrogenase family
GOQ09_06245	COG0411	ABC transporter
GOQ09_06260	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
GOQ09_06265	COG2151	metal-sulfur cluster biosynthetic enzyme
GOQ09_06270	COG3396	Phenylacetate-CoA oxygenase
GOQ09_06275	COG3460	Phenylacetate-CoA oxygenase
GOQ09_06280	COG3396	Phenylacetate-CoA oxygenase
GOQ09_06290	COG2050	protein possibly involved in aromatic compounds catabolism
GOQ09_06295	COG1024	Enoyl-CoA hydratase
GOQ09_06305	COG1309	transcriptional regulator
GOQ09_06310	COG0300	oxidoreductase activity
GOQ09_06320	COG2304	oxidoreductase activity
GOQ09_06330	COG0714	Associated with various cellular activities
GOQ09_06335	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
GOQ09_06340	COG0084	hydrolase, TatD family'
GOQ09_06355	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
GOQ09_06360	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
GOQ09_06375	COG0583	DNA-binding transcription factor activity
GOQ09_06395	COG1028	Short-chain dehydrogenase reductase Sdr
GOQ09_06415	COG1283	sodium-dependent phosphate transmembrane transporter activity
GOQ09_06420	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
GOQ09_06425	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
GOQ09_06445	COG1609	Transcriptional regulator
GOQ09_06450	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
GOQ09_06460	COG0196	riboflavin kinase activity
GOQ09_06480	COG1960	acyl-CoA dehydrogenase activity
GOQ09_06485	COG1960	acyl-CoA dehydrogenase activity
GOQ09_06490	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
GOQ09_06510	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
GOQ09_06510	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
GOQ09_06520	COG0267	Belongs to the bacterial ribosomal protein bL33 family
GOQ09_06525	COG0227	Belongs to the bacterial ribosomal protein bL28 family
GOQ09_06530	COG0492	ferredoxin-NADP+ reductase activity
GOQ09_06540	COG1674	ftsk spoiiie
GOQ09_06545	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
GOQ09_06550	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
GOQ09_06555	COG0559	Belongs to the binding-protein-dependent transport system permease family
GOQ09_06565	COG0411	ABC transporter
GOQ09_06580	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
GOQ09_06580	COG0543	2 iron, 2 sulfur cluster binding
GOQ09_06600	COG2816	NAD+ diphosphatase activity
GOQ09_06605	COG0425	Belongs to the sulfur carrier protein TusA family
GOQ09_06615	COG0525	valine-tRNA ligase activity
GOQ09_06620	COG3022	response to hydroperoxide
GOQ09_06635	COG2904	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
GOQ09_06635	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
GOQ09_06640	COG1028	Short-chain dehydrogenase reductase Sdr
GOQ09_06655	COG1960	acyl-CoA dehydrogenase activity
GOQ09_06660	COG1960	acyl-CoA dehydrogenase activity
GOQ09_06670	COG0318	PFAM AMP-dependent synthetase and ligase
GOQ09_06705	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
GOQ09_06725	COG0477	Major facilitator Superfamily
GOQ09_06740	COG1304	FMN binding
GOQ09_06745	COG0583	DNA-binding transcription factor activity
GOQ09_06760	COG1513	Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide
GOQ09_06765	COG4221	oxidoreductase activity
GOQ09_06800	COG2831	hemolysin activation secretion protein
GOQ09_06820	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
GOQ09_06830	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
GOQ09_06835	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
GOQ09_06855	COG2807	transmembrane transport
GOQ09_06860	COG2186	Transcriptional regulator
GOQ09_06865	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
GOQ09_06880	COG1280	lysine exporter protein (LysE YggA)
GOQ09_06900	COG2603	Catalyzes the transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA
GOQ09_06910	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
GOQ09_06915	COG3221	ABC-type phosphate phosphonate transport system periplasmic component
GOQ09_06940	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
GOQ09_06980	COG0165	Argininosuccinate lyase
GOQ09_06985	COG3275	phosphorelay sensor kinase activity
GOQ09_06995	COG0628	permease
GOQ09_07010	COG0583	DNA-binding transcription factor activity
GOQ09_07015	COG2814	Major facilitator Superfamily
GOQ09_07025	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
GOQ09_07030	COG0181	hydroxymethylbilane synthase activity
GOQ09_07050	COG1530	ribonuclease E activity
GOQ09_07070	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
GOQ09_07070	COG0616	signal peptide processing
GOQ09_07075	COG2223	nitrite transmembrane transporter activity
GOQ09_07080	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
GOQ09_07085	COG0424	maF-like protein
GOQ09_07090	COG1399	metal-binding, possibly nucleic acid-binding protein
GOQ09_07095	COG0333	Belongs to the bacterial ribosomal protein bL32 family
GOQ09_07100	COG0416	fatty acid biosynthetic process
GOQ09_07105	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
GOQ09_07110	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
GOQ09_07115	COG1028	Short-chain dehydrogenase reductase Sdr
GOQ09_07120	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
GOQ09_07125	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
GOQ09_07150	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
GOQ09_07155	COG0481	GTPase activity
GOQ09_07160	COG0681	Belongs to the peptidase S26 family
GOQ09_07170	COG0571	ribonuclease III activity
GOQ09_07175	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
GOQ09_07180	COG1381	Involved in DNA repair and RecF pathway recombination
GOQ09_07185	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
GOQ09_07190	COG0736	holo-[acyl-carrier-protein] synthase activity
GOQ09_07195	COG1472	Belongs to the glycosyl hydrolase 3 family
GOQ09_07200	COG1451	nucleotide metabolic process
GOQ09_07205	COG0443	Heat shock 70 kDa protein
GOQ09_07210	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
GOQ09_07220	COG0762	integral membrane protein
GOQ09_07225	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
GOQ09_07230	COG0159	tryptophan synthase activity
GOQ09_07235	COG0133	tryptophan synthase activity
GOQ09_07240	COG0135	phosphoribosylanthranilate isomerase activity
GOQ09_07245	COG0101	tRNA pseudouridine synthase activity
GOQ09_07255	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
GOQ09_07260	COG0473	3-isopropylmalate dehydrogenase activity
GOQ09_07265	COG0066	3-isopropylmalate dehydratase activity
GOQ09_07270	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
GOQ09_07285	COG0372	Belongs to the citrate synthase family
GOQ09_07290	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
GOQ09_07295	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
GOQ09_07300	COG1053	succinate dehydrogenase
GOQ09_07315	COG2188	Transcriptional regulator
GOQ09_07320	COG0039	L-malate dehydrogenase activity
GOQ09_07325	COG4106	trans-aconitate 2-methyltransferase activity
GOQ09_07355	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
GOQ09_07390	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
GOQ09_07400	COG3483	tryptophan 2,3-dioxygenase activity
GOQ09_07415	COG1878	Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation
GOQ09_07425	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
GOQ09_07430	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
GOQ09_07440	COG0268	Binds directly to 16S ribosomal RNA
GOQ09_07445	COG0728	peptidoglycan biosynthetic process
GOQ09_07460	COG3795	YCII-related domain
GOQ09_07465	COG3795	YCII-related domain
GOQ09_07470	COG4941	Belongs to the sigma-70 factor family
GOQ09_07475	COG1917	Cupin 2, conserved barrel domain protein
GOQ09_07475	COG4977	sequence-specific DNA binding
GOQ09_07495	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
GOQ09_07500	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
GOQ09_07505	COG0617	tRNA 3'-terminal CCA addition
GOQ09_07515	COG1392	Phosphate transport regulator
GOQ09_07520	COG0306	phosphate transporter
GOQ09_07535	COG0228	four-way junction DNA binding
GOQ09_07540	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
GOQ09_07545	COG0336	Belongs to the RNA methyltransferase TrmD family
GOQ09_07550	COG0335	large ribosomal subunit rRNA binding
GOQ09_07560	COG1270	Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group
GOQ09_07565	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
GOQ09_07575	COG1162	GTPase activity
GOQ09_07580	COG2154	pterin-4-alpha-carbinolamine dehydratase
GOQ09_07585	COG0501	Belongs to the peptidase M48B family
GOQ09_07590	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
GOQ09_07595	COG0513	Belongs to the DEAD box helicase family
GOQ09_07600	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
GOQ09_07605	COG1250	3-hydroxyacyl-CoA dehydrogenase
GOQ09_07610	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
GOQ09_07615	COG0604	alcohol dehydrogenase
GOQ09_07640	COG4638	Rieske (2fe-2S)
GOQ09_07655	COG0183	Belongs to the thiolase family
GOQ09_07665	COG1878	Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation
GOQ09_07670	COG1028	Short-chain dehydrogenase reductase Sdr
GOQ09_07680	COG0683	leucine binding
GOQ09_07685	COG4638	Rieske (2fe-2S)
GOQ09_07690	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
GOQ09_07700	COG0559	Belongs to the binding-protein-dependent transport system permease family
GOQ09_07705	COG0411	ABC transporter
GOQ09_07715	COG0318	PFAM AMP-dependent synthetase and ligase
GOQ09_07755	COG0584	glycerophosphoryl diester phosphodiesterase
GOQ09_07765	COG0840	transmembrane signaling receptor activity
GOQ09_07775	COG4221	oxidoreductase activity
GOQ09_07790	COG4964	Belongs to the GSP D family
GOQ09_07850	COG2197	response regulator
GOQ09_07870	COG0516	GMP reductase activity
GOQ09_07875	COG0210	DNA helicase
GOQ09_07895	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
GOQ09_07910	COG0477	Major facilitator Superfamily
GOQ09_07915	COG0583	DNA-binding transcription factor activity
GOQ09_07930	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
GOQ09_07935	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
GOQ09_07945	COG0412	Dienelactone hydrolase
GOQ09_08005	COG1722	exodeoxyribonuclease VII activity
GOQ09_08010	COG0142	geranyltranstransferase activity
GOQ09_08015	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
GOQ09_08020	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
GOQ09_08025	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
GOQ09_08035	COG1262	PFAM Formylglycine-generating sulfatase enzyme
GOQ09_08040	COG0477	Major facilitator Superfamily
GOQ09_08045	COG1910	domain protein
GOQ09_08070	COG0559	Belongs to the binding-protein-dependent transport system permease family
GOQ09_08105	COG1122	ATPase activity
GOQ09_08155	COG3608	succinylglutamate desuccinylase aspartoacylase
GOQ09_08155	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
GOQ09_08160	COG1320	monovalent cation:proton antiporter activity
GOQ09_08165	COG2212	antiporter activity
GOQ09_08175	COG0651	ATP synthesis coupled electron transport
GOQ09_08180	COG1006	Multisubunit Na H antiporter MnhC subunit
GOQ09_08185	COG2111	Na H antiporter
GOQ09_08185	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
GOQ09_08190	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
GOQ09_08205	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
GOQ09_08215	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
GOQ09_08225	COG0776	regulation of translation
GOQ09_08235	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
GOQ09_08240	COG0287	Prephenate dehydrogenase
GOQ09_08245	COG0077	Prephenate dehydratase
GOQ09_08245	COG1605	Chorismate mutase
GOQ09_08250	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
GOQ09_08270	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
GOQ09_08285	COG4797	methyltransferase
GOQ09_08285	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
GOQ09_08295	COG1187	pseudouridine synthase activity
GOQ09_08320	COG1546	Belongs to the CinA family
GOQ09_08320	COG1058	Belongs to the CinA family
GOQ09_08335	COG3852	Histidine kinase
GOQ09_08340	COG2204	response regulator
GOQ09_08350	COG0708	Exodeoxyribonuclease III
GOQ09_08390	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
GOQ09_08400	COG0467	Core component of the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. Binds to DNA. The KaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction
GOQ09_08405	COG5002	protein histidine kinase activity
GOQ09_08410	COG0392	lysyltransferase activity
GOQ09_08435	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
GOQ09_08455	COG0277	FAD linked oxidase domain protein
GOQ09_08465	COG1295	ribonuclease BN
GOQ09_08475	COG3118	belongs to the thioredoxin family
GOQ09_08485	COG0583	DNA-binding transcription factor activity
GOQ09_08495	COG3181	Tripartite tricarboxylate transporter family receptor
GOQ09_08500	COG2267	carboxylic ester hydrolase activity
GOQ09_08520	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
GOQ09_08525	COG0583	DNA-binding transcription factor activity
GOQ09_08575	COG3265	gluconokinase activity
GOQ09_08580	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
GOQ09_08605	COG0346	lactoylglutathione lyase activity
GOQ09_08615	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
GOQ09_08630	COG0625	glutathione transferase activity
GOQ09_08645	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
GOQ09_08650	COG2719	SpoVR family
GOQ09_08655	COG2718	Belongs to the UPF0229 family
GOQ09_08660	COG2766	serine protein kinase
GOQ09_08665	COG0484	heat shock protein binding
GOQ09_08670	COG0443	Heat shock 70 kDa protein
GOQ09_08675	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
GOQ09_08690	COG0688	phosphatidylethanolamine metabolic process
GOQ09_08695	COG3181	Tripartite tricarboxylate transporter family receptor
GOQ09_08700	COG2706	6-phosphogluconolactonase activity
GOQ09_08715	COG2721	sulfolactate sulfo-lyase activity
GOQ09_08730	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
GOQ09_08740	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
GOQ09_08745	COG2186	Transcriptional regulator
GOQ09_08750	COG3181	Tripartite tricarboxylate transporter family receptor
GOQ09_08755	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
GOQ09_08770	COG1012	belongs to the aldehyde dehydrogenase family
GOQ09_08775	COG0477	Major facilitator Superfamily
GOQ09_08795	COG1538	Outer membrane efflux protein
GOQ09_08800	COG0842	Transport permease protein
GOQ09_08805	COG0842	Transport permease protein
GOQ09_08810	COG1131	(ABC) transporter
GOQ09_08815	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
GOQ09_08825	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
GOQ09_08830	COG0625	glutathione transferase activity
GOQ09_08835	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
GOQ09_08845	COG1802	Transcriptional regulator
GOQ09_08880	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
GOQ09_08895	COG0583	DNA-binding transcription factor activity
GOQ09_08900	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
GOQ09_08905	COG1804	L-carnitine dehydratase bile acid-inducible protein F
GOQ09_08925	COG2814	Major facilitator Superfamily
GOQ09_08930	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
GOQ09_08935	COG0358	DNA primase activity
GOQ09_08940	COG1295	ribonuclease BN
GOQ09_08940	COG1959	2 iron, 2 sulfur cluster binding
GOQ09_08955	COG0123	including yeast histone deacetylase and acetoin utilization protein
GOQ09_08970	COG3237	CsbD-like
GOQ09_08975	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
GOQ09_08985	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
GOQ09_08990	COG1322	Protein conserved in bacteria
GOQ09_09000	COG1611	Belongs to the LOG family
GOQ09_09005	COG1024	Enoyl-CoA hydratase
GOQ09_09010	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
GOQ09_09025	COG0322	excinuclease ABC activity
GOQ09_09040	COG0583	DNA-binding transcription factor activity
GOQ09_09045	COG0596	Alpha beta hydrolase
GOQ09_09050	COG0473	3-isopropylmalate dehydrogenase activity
GOQ09_09065	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
GOQ09_09105	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
GOQ09_09110	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
GOQ09_09125	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
GOQ09_09130	COG0670	Belongs to the BI1 family
GOQ09_09135	COG3193	protein, possibly involved in utilization of glycolate and propanediol
GOQ09_09165	COG4774	siderophore transport
GOQ09_09170	COG3128	pkhd-type hydroxylase
GOQ09_09200	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
GOQ09_09215	COG0360	Binds together with S18 to 16S ribosomal RNA
GOQ09_09220	COG2965	DNA replication, synthesis of RNA primer
GOQ09_09225	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
GOQ09_09230	COG0359	binds to the 23S rRNA
GOQ09_09235	COG0305	Participates in initiation and elongation during chromosome replication
GOQ09_09260	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
GOQ09_09265	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
GOQ09_09275	COG0436	Aminotransferase
GOQ09_09285	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
GOQ09_09290	COG1763	Mo-molybdopterin cofactor biosynthetic process
GOQ09_09295	COG0303	'Molybdopterin
GOQ09_09300	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
GOQ09_09305	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
GOQ09_09310	COG0314	molybdopterin synthase activity
GOQ09_09315	COG3181	Tripartite tricarboxylate transporter family receptor
GOQ09_09320	COG0542	response to heat
GOQ09_09330	COG1022	Amp-dependent synthetase and ligase
GOQ09_09335	COG0410	ABC transporter
GOQ09_09360	COG1309	transcriptional regulator
GOQ09_09365	COG0183	Belongs to the thiolase family
GOQ09_09385	COG0583	DNA-binding transcription factor activity
GOQ09_09395	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
GOQ09_09400	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
GOQ09_09415	COG2814	Major facilitator Superfamily
GOQ09_09435	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
GOQ09_09440	COG3214	Protein conserved in bacteria
GOQ09_09455	COG0673	inositol 2-dehydrogenase activity
GOQ09_09465	COG1309	transcriptional regulator
GOQ09_09470	COG0028	Belongs to the TPP enzyme family
GOQ09_09490	COG2224	Isocitrate lyase
GOQ09_09495	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
GOQ09_09500	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
GOQ09_09505	COG0291	Belongs to the bacterial ribosomal protein bL35 family
GOQ09_09510	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
GOQ09_09515	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
GOQ09_09520	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
GOQ09_09520	COG0072	phenylalanine-tRNA ligase activity
GOQ09_09525	COG0776	regulation of translation
GOQ09_09560	COG3447	MASE1 domain protein
GOQ09_09560	COG5002	protein histidine kinase activity
GOQ09_09560	COG5001	Diguanylate cyclase
GOQ09_09565	COG2223	nitrite transmembrane transporter activity
GOQ09_09570	COG3604	Transcriptional regulator
GOQ09_09590	COG1028	Short-chain dehydrogenase reductase Sdr
GOQ09_09600	COG1309	transcriptional regulator
GOQ09_09605	COG0820	rRNA (adenine-C2-)-methyltransferase activity
GOQ09_09630	COG2205	protein histidine kinase activity
GOQ09_09655	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
GOQ09_09670	COG1595	DNA-templated transcription, initiation
GOQ09_09680	COG1012	belongs to the aldehyde dehydrogenase family
GOQ09_09685	COG2721	sulfolactate sulfo-lyase activity
GOQ09_09705	COG2197	response regulator
GOQ09_09720	COG0702	epimerase
GOQ09_09775	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
GOQ09_09785	COG0673	inositol 2-dehydrogenase activity
GOQ09_09790	COG0438	transferase activity, transferring glycosyl groups
GOQ09_09810	COG0500	methyltransferase
GOQ09_09840	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
GOQ09_09850	COG2204	response regulator
GOQ09_09865	COG2201	protein-glutamate methylesterase activity
GOQ09_09870	COG3546	catalase activity
GOQ09_09875	COG3685	Protein conserved in bacteria
GOQ09_09945	COG0431	NADPH-dependent FMN reductase
GOQ09_09960	COG0798	PFAM Bile acid sodium symporter
GOQ09_10000	COG2199	diguanylate cyclase activity
GOQ09_10000	COG2200	EAL domain
GOQ09_10000	COG3287	FIST C domain
GOQ09_10005	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
GOQ09_10020	COG0366	Alpha amylase catalytic
GOQ09_10045	COG0071	Belongs to the small heat shock protein (HSP20) family
GOQ09_10060	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
GOQ09_10065	COG0366	Alpha amylase catalytic
GOQ09_10070	COG0366	Alpha amylase catalytic
GOQ09_10085	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
GOQ09_10090	COG1640	4-alpha-glucanotransferase
GOQ09_10105	COG1028	Short-chain dehydrogenase reductase Sdr
GOQ09_10115	COG0583	DNA-binding transcription factor activity
GOQ09_10120	COG0583	DNA-binding transcription factor activity
GOQ09_10280	COG0028	Belongs to the TPP enzyme family
GOQ09_10290	COG2905	signal-transduction protein containing cAMP-binding and CBS domains
GOQ09_10295	COG1335	isochorismatase
GOQ09_10300	COG0300	oxidoreductase activity
GOQ09_10335	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
GOQ09_10350	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
GOQ09_10360	COG3045	CreA protein
GOQ09_10390	COG3243	poly(R)-hydroxyalkanoic acid synthase
GOQ09_10395	COG0183	Belongs to the thiolase family
GOQ09_10400	COG0583	DNA-binding transcription factor activity
GOQ09_10410	COG3777	bacterial-type RNA polymerase transcription factor activity, metal ion regulated sequence-specific DNA binding
GOQ09_10445	COG1012	belongs to the aldehyde dehydrogenase family
GOQ09_10450	COG0473	3-isopropylmalate dehydrogenase activity
GOQ09_10460	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
GOQ09_10465	COG0601	transmembrane transport
GOQ09_10470	COG4166	transmembrane transport
GOQ09_10475	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
GOQ09_10490	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
GOQ09_10500	COG1522	sequence-specific DNA binding
GOQ09_10530	COG1056	cytidyltransferase-related domain
GOQ09_10530	COG1051	belongs to the nudix hydrolase family
GOQ09_10535	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
GOQ09_10535	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
GOQ09_10540	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
GOQ09_10575	COG1028	Short-chain dehydrogenase reductase Sdr
GOQ09_10580	COG1301	dicarboxylic acid transport
GOQ09_10585	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
GOQ09_10585	COG4651	solute:proton antiporter activity
GOQ09_10630	COG3181	Tripartite tricarboxylate transporter family receptor
GOQ09_10635	COG2249	NAD(P)H dehydrogenase (quinone) activity
GOQ09_10640	COG0583	DNA-binding transcription factor activity
GOQ09_10655	COG1522	sequence-specific DNA binding
GOQ09_10660	COG0028	Belongs to the TPP enzyme family
GOQ09_10670	COG3181	Tripartite tricarboxylate transporter family receptor
GOQ09_10675	COG3384	dioxygenase
GOQ09_10690	COG2159	amidohydrolase
GOQ09_10695	COG0583	DNA-binding transcription factor activity
GOQ09_10720	COG0702	epimerase
GOQ09_10730	COG3252	Catalyzes the hydrolysis of methenyl-H(4)MPT( ) to 5- formyl-H(4)MPT
GOQ09_10745	COG1795	PFAM Formaldehyde-activating enzyme (Fae)
GOQ09_10755	COG3284	Transcriptional regulator
GOQ09_10795	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
GOQ09_10805	COG1229	Formylmethanofuran dehydrogenase subunit A
GOQ09_10810	COG2037	Catalyzes the transfer of a formyl group from 5-formyl tetrahydromethanopterin (5-formyl-H(4)MPT) to methanofuran (MFR) so as to produce formylmethanofuran (formyl-MFR) and tetrahydromethanopterin (H(4)MPT)
GOQ09_10865	COG2197	response regulator
GOQ09_10870	COG3851	Histidine kinase
GOQ09_10885	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
GOQ09_10900	COG0535	radical SAM domain protein
GOQ09_10930	COG0714	Associated with various cellular activities
GOQ09_10960	COG2010	Cytochrome c
GOQ09_11005	COG1850	ribulose-bisphosphate carboxylase activity
GOQ09_11015	COG0464	growth
GOQ09_11020	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
GOQ09_11030	COG0546	phosphoglycolate phosphatase activity
GOQ09_11035	COG0158	D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1
GOQ09_11040	COG3954	Phosphoribulokinase
GOQ09_11045	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
GOQ09_11050	COG0191	fructose-bisphosphate aldolase activity
GOQ09_11060	COG0861	Integral membrane protein TerC family
GOQ09_11065	COG3360	Dodecin
GOQ09_11080	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
GOQ09_11085	COG0583	DNA-binding transcription factor activity
GOQ09_11115	COG1294	oxidase, subunit
GOQ09_11120	COG1271	oxidase subunit
GOQ09_11135	COG1538	Outer membrane efflux protein
GOQ09_11150	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
GOQ09_11155	COG0583	DNA-binding transcription factor activity
GOQ09_11165	COG1028	Short-chain dehydrogenase reductase Sdr
GOQ09_11175	COG4221	oxidoreductase activity
GOQ09_11220	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
GOQ09_11230	COG1802	Transcriptional regulator
GOQ09_11245	COG1703	isobutyryl-CoA mutase activity
GOQ09_11250	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
GOQ09_11255	COG0439	Biotin carboxylase
GOQ09_11260	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
GOQ09_11270	COG1522	sequence-specific DNA binding
GOQ09_11275	COG0697	spore germination
GOQ09_11285	COG2878	Part of a membrane complex involved in electron transport
GOQ09_11305	COG1959	2 iron, 2 sulfur cluster binding
GOQ09_11310	COG1104	cysteine desulfurase activity
GOQ09_11315	COG0822	iron-sulfur transferase activity
GOQ09_11325	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
GOQ09_11330	COG0443	Heat shock 70 kDa protein
GOQ09_11335	COG0633	Ferredoxin
GOQ09_11355	COG0579	oxidoreductase
GOQ09_11370	COG0167	dihydroorotate dehydrogenase activity
GOQ09_11375	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
GOQ09_11390	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
GOQ09_11395	COG4566	intracellular signal transduction
GOQ09_11405	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
GOQ09_11410	COG0508	dehydrogenase complex catalyzes the overall conversion of
GOQ09_11415	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
GOQ09_11420	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
GOQ09_11425	COG0791	NLP P60 protein
GOQ09_11430	COG2133	pyrroloquinoline quinone binding
GOQ09_11445	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
GOQ09_11450	COG0567	Dehydrogenase, E1 component
GOQ09_11455	COG0508	dehydrogenase complex catalyzes the overall conversion of
GOQ09_11460	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
GOQ09_11465	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
GOQ09_11485	COG1199	ATP-dependent helicase activity
GOQ09_11495	COG0564	pseudouridine synthase activity
GOQ09_11500	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
GOQ09_11505	COG1187	pseudouridine synthase activity
GOQ09_11510	COG0105	UTP biosynthetic process
GOQ09_11515	COG0820	rRNA (adenine-C2-)-methyltransferase activity
GOQ09_11530	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
GOQ09_11535	COG0124	histidyl-tRNA synthetase
GOQ09_11545	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
GOQ09_11550	COG1160	GTP binding
GOQ09_11555	COG1923	regulation of RNA biosynthetic process
GOQ09_11560	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
GOQ09_11565	COG0330	HflC and HflK could
GOQ09_11570	COG0330	HflC and HflK could
GOQ09_11580	COG3705	Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
GOQ09_11585	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
GOQ09_11610	COG0626	cystathionine gamma-synthase activity
GOQ09_11630	COG4181	ATPase activity
GOQ09_11640	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
GOQ09_11650	COG1396	sequence-specific DNA binding
GOQ09_11660	COG0667	Aldo Keto reductase
GOQ09_11665	COG2059	Chromate
GOQ09_11675	COG1295	ribonuclease BN
GOQ09_11695	COG1028	Short-chain dehydrogenase reductase Sdr
GOQ09_11745	COG1028	Short-chain dehydrogenase reductase Sdr
GOQ09_11760	COG1024	Enoyl-CoA hydratase
GOQ09_11790	COG0514	ATP-dependent DNA helicase (RecQ)
GOQ09_11885	COG1987	bacterial-type flagellum assembly
GOQ09_11890	COG1684	flagellar biosynthetic protein fliR
GOQ09_11895	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
GOQ09_11900	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
GOQ09_11905	COG4786	Flagellar basal body rod
GOQ09_11910	COG4786	Flagellar basal body rod
GOQ09_11920	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
GOQ09_11925	COG1706	bacterial-type flagellum-dependent cell motility
GOQ09_11935	COG1558	bacterial-type flagellum-dependent cell motility
GOQ09_11940	COG1677	Flagellar hook-basal body complex protein FliE
GOQ09_11960	COG1157	protein secretion by the type III secretion system
GOQ09_11975	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
GOQ09_11980	COG1749	Flagellar hook protein flgE
GOQ09_12005	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
GOQ09_12040	COG3128	pkhd-type hydroxylase
GOQ09_12060	COG0582	viral genome integration into host DNA
GOQ09_12100	COG0625	glutathione transferase activity
GOQ09_12105	COG0492	ferredoxin-NADP+ reductase activity
GOQ09_12130	COG0248	Ppx GppA phosphatase
GOQ09_12135	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
GOQ09_12140	COG0573	inorganic phosphate transmembrane transporter activity
GOQ09_12145	COG0581	inorganic phosphate transmembrane transporter activity
GOQ09_12150	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
GOQ09_12165	COG5002	protein histidine kinase activity
GOQ09_12170	COG0534	Mate efflux family protein
GOQ09_12180	COG0254	rRNA binding
GOQ09_12185	COG0673	inositol 2-dehydrogenase activity
GOQ09_12190	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
GOQ09_12215	COG1733	regulation of RNA biosynthetic process
GOQ09_12230	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
GOQ09_12235	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
GOQ09_12240	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
GOQ09_12250	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
GOQ09_12260	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
GOQ09_12265	COG0741	lytic transglycosylase activity
GOQ09_12265	COG1388	LysM domain
GOQ09_12270	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
GOQ09_12280	COG0328	RNA-DNA hybrid ribonuclease activity
GOQ09_12290	COG0746	molybdenum cofactor guanylyltransferase activity
GOQ09_12295	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
GOQ09_12310	COG1012	belongs to the aldehyde dehydrogenase family
GOQ09_12320	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
GOQ09_12380	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
GOQ09_12395	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
GOQ09_12395	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
GOQ09_12410	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
GOQ09_12435	COG0028	Belongs to the TPP enzyme family
GOQ09_12440	COG0440	acetolactate synthase activity
GOQ09_12450	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
GOQ09_12455	COG1183	phosphatidylcholine synthase activity
GOQ09_12460	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
GOQ09_12465	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
GOQ09_12475	COG1414	Transcriptional regulator
GOQ09_12480	COG2935	proteasome-mediated ubiquitin-dependent protein catabolic process
GOQ09_12485	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
GOQ09_12505	COG1414	Transcriptional regulator
GOQ09_12510	COG0745	RESPONSE REGULATOR receiver
GOQ09_12515	COG0642	Histidine kinase
GOQ09_12520	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
GOQ09_12545	COG5295	Hep Hag repeat protein
GOQ09_12575	COG2022	thiamine diphosphate biosynthetic process
GOQ09_12590	COG0351	phosphomethylpyrimidine kinase
GOQ09_12600	COG0492	ferredoxin-NADP+ reductase activity
GOQ09_12605	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
GOQ09_12610	COG2895	sulfate adenylyltransferase (ATP) activity
GOQ09_12620	COG0175	sulfate reduction
GOQ09_12645	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
GOQ09_12650	COG0601	transmembrane transport
GOQ09_12655	COG0747	negative chemotaxis
GOQ09_12660	COG4172	Belongs to the ABC transporter superfamily
GOQ09_12665	COG1446	asparaginase
GOQ09_12695	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
GOQ09_12700	COG0642	Histidine kinase
GOQ09_12705	COG0745	RESPONSE REGULATOR receiver
GOQ09_12710	COG0583	DNA-binding transcription factor activity
GOQ09_12715	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
GOQ09_12720	COG3588	fructose-bisphosphate aldolase
GOQ09_12725	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
GOQ09_12750	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
GOQ09_12750	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
GOQ09_12755	COG2924	Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes
GOQ09_12765	COG0431	NADPH-dependent FMN reductase
GOQ09_12770	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
GOQ09_12775	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
GOQ09_12780	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
GOQ09_12785	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
GOQ09_12790	COG1116	anion transmembrane transporter activity
GOQ09_12805	COG1045	serine acetyltransferase
GOQ09_12820	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
GOQ09_12830	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
GOQ09_12840	COG0450	alkyl hydroperoxide reductase
GOQ09_12850	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
GOQ09_12860	COG4208	sulfate ABC transporter
GOQ09_12865	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
GOQ09_12870	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
GOQ09_12880	COG3550	peptidyl-serine autophosphorylation
GOQ09_12895	COG1196	nuclear chromosome segregation
GOQ09_12905	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
GOQ09_12915	COG0242	peptide deformylase activity
GOQ09_12925	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
GOQ09_12930	COG4597	amino acid ABC transporter
GOQ09_12935	COG0765	amino acid transport
GOQ09_12945	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
GOQ09_12950	COG0024	Methionine aminopeptidase
GOQ09_12955	COG0047	phosphoribosylformylglycinamidine synthase activity
GOQ09_12955	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
GOQ09_12960	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
GOQ09_12970	COG2917	probably involved in intracellular septation
GOQ09_12975	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
GOQ09_12980	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
GOQ09_12990	COG2272	Belongs to the type-B carboxylesterase lipase family
GOQ09_12995	COG0318	PFAM AMP-dependent synthetase and ligase
GOQ09_13020	COG0411	ABC transporter
GOQ09_13030	COG1250	3-hydroxyacyl-CoA dehydrogenase
GOQ09_13030	COG1024	Enoyl-CoA hydratase
GOQ09_13035	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
GOQ09_13040	COG0183	Belongs to the thiolase family
GOQ09_13045	COG1960	acyl-CoA dehydrogenase activity
GOQ09_13065	COG2130	NADP-dependent
GOQ09_13070	COG1960	acyl-CoA dehydrogenase activity
GOQ09_13085	COG1122	ATPase activity
GOQ09_13095	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
GOQ09_13100	COG0667	Aldo Keto reductase
GOQ09_13105	COG2814	Major facilitator Superfamily
GOQ09_13110	COG0583	DNA-binding transcription factor activity
GOQ09_13135	COG0277	FAD linked oxidase domain protein
GOQ09_13135	COG0247	lactate metabolic process
GOQ09_13160	COG2814	Major facilitator Superfamily
GOQ09_13165	COG2995	paraquat-inducible protein a
GOQ09_13170	COG2995	paraquat-inducible protein a
GOQ09_13175	COG3008	intermembrane lipid transfer
GOQ09_13175	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
GOQ09_13185	COG0477	Major facilitator Superfamily
GOQ09_13190	COG0534	Mate efflux family protein
GOQ09_13215	COG2183	response to ionizing radiation
GOQ09_13255	COG3501	Rhs element vgr protein
GOQ09_13285	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
GOQ09_13290	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
GOQ09_13305	COG0084	hydrolase, TatD family'
GOQ09_13310	COG0666	response to abiotic stimulus
GOQ09_13320	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
GOQ09_13325	COG0745	RESPONSE REGULATOR receiver
GOQ09_13340	COG1028	Short-chain dehydrogenase reductase Sdr
GOQ09_13370	COG0745	RESPONSE REGULATOR receiver
GOQ09_13375	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
GOQ09_13395	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
GOQ09_13415	COG0840	transmembrane signaling receptor activity
GOQ09_13430	COG1917	Cupin 2, conserved barrel domain protein
GOQ09_13430	COG4977	sequence-specific DNA binding
GOQ09_13440	COG5001	Diguanylate cyclase
GOQ09_13450	COG0667	Aldo Keto reductase
GOQ09_13455	COG0583	DNA-binding transcription factor activity
GOQ09_13465	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
GOQ09_13490	COG3706	GGDEF domain
GOQ09_13495	COG1028	Short-chain dehydrogenase reductase Sdr
GOQ09_13510	COG3285	dna ligase
GOQ09_13510	COG1793	dna ligase
GOQ09_13565	COG2832	Protein of unknown function (DUF454)
GOQ09_13585	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
GOQ09_13595	COG0583	DNA-binding transcription factor activity
GOQ09_13600	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
GOQ09_13610	COG1028	Short-chain dehydrogenase reductase Sdr
GOQ09_13645	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
GOQ09_13650	COG2030	dehydratase
GOQ09_13670	COG0318	PFAM AMP-dependent synthetase and ligase
GOQ09_13700	COG1024	Enoyl-CoA hydratase
GOQ09_13705	COG1609	Transcriptional regulator
GOQ09_13710	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
GOQ09_13715	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
GOQ09_13725	COG1850	ribulose-bisphosphate carboxylase activity
GOQ09_13735	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
GOQ09_13755	COG0515	serine threonine protein kinase
GOQ09_13755	COG2815	serine threonine protein kinase
GOQ09_13760	COG2205	protein histidine kinase activity
GOQ09_13765	COG0596	Alpha beta hydrolase
GOQ09_13805	COG3220	belongs to the UPF0276 family
GOQ09_13815	COG1028	Short-chain dehydrogenase reductase Sdr
GOQ09_13825	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
GOQ09_13850	COG2207	Transcriptional regulator
GOQ09_13870	COG4968	Prepilin-type N-terminal cleavage methylation domain
GOQ09_13915	COG2207	Transcriptional regulator
GOQ09_13920	COG0667	Aldo Keto reductase
GOQ09_13925	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
GOQ09_13930	COG0156	8-amino-7-oxononanoate synthase activity
GOQ09_13960	COG1199	ATP-dependent helicase activity
GOQ09_13960	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
GOQ09_13965	COG0784	Response regulator, receiver
GOQ09_13965	COG5002	protein histidine kinase activity
GOQ09_13970	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
GOQ09_14000	COG1619	proteins homologs of microcin C7 resistance protein MccF
GOQ09_14005	COG0590	tRNA wobble adenosine to inosine editing
GOQ09_14030	COG4566	intracellular signal transduction
GOQ09_14035	COG4191	Histidine kinase
GOQ09_14080	COG1309	transcriptional regulator
GOQ09_14090	COG2818	Glycosylase
GOQ09_14105	COG1131	(ABC) transporter
GOQ09_14125	COG0518	GMP synthase (glutamine-hydrolyzing) activity
GOQ09_14125	COG0519	Catalyzes the synthesis of GMP from XMP
GOQ09_14155	COG2867	negative regulation of translational initiation
GOQ09_14160	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
GOQ09_14195	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
GOQ09_14200	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
GOQ09_14205	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
GOQ09_14210	COG0195	Participates in both transcription termination and antitermination
GOQ09_14210	COG2251	uridine kinase activity
GOQ09_14215	COG0779	Required for maturation of 30S ribosomal subunits
GOQ09_14220	COG0477	Major facilitator Superfamily
GOQ09_14225	COG4172	Belongs to the ABC transporter superfamily
GOQ09_14230	COG4239	(ABC) transporter, permease
GOQ09_14235	COG4174	ABC transporter (Permease)
GOQ09_14240	COG4166	transmembrane transport
GOQ09_14250	COG1793	dna ligase
GOQ09_14255	COG1982	Orn Lys Arg decarboxylase major
GOQ09_14300	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
GOQ09_14320	COG0583	DNA-binding transcription factor activity
GOQ09_14325	COG0436	Aminotransferase
GOQ09_14335	COG1643	Atp-dependent helicase
GOQ09_14345	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
GOQ09_14345	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
GOQ09_14350	COG1280	lysine exporter protein (LysE YggA)
GOQ09_14385	COG2171	N-acyltransferase activity
GOQ09_14395	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
GOQ09_14400	COG2890	protein-(glutamine-N5) methyltransferase activity
GOQ09_14415	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
GOQ09_14450	COG0861	Integral membrane protein TerC family
GOQ09_14470	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
GOQ09_14485	COG0823	Involved in the tonB-independent uptake of proteins
GOQ09_14490	COG1132	(ABC) transporter
GOQ09_14495	COG1530	ribonuclease E activity
GOQ09_14500	COG0424	maF-like protein
GOQ09_14505	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
GOQ09_14510	COG0799	negative regulation of ribosome biogenesis
GOQ09_14515	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
GOQ09_14520	COG0408	coproporphyrinogen oxidase activity
GOQ09_14525	COG0151	Belongs to the GarS family
GOQ09_14530	COG0217	transcriptional regulatory protein
GOQ09_14535	COG2226	methyltransferase
GOQ09_14590	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
GOQ09_14605	COG0433	COG0433 Predicted ATPase
GOQ09_14615	COG1595	DNA-templated transcription, initiation
GOQ09_14640	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
GOQ09_14645	COG1744	ABC transporter substrate-binding protein PnrA-like
GOQ09_14650	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
GOQ09_14680	COG0402	S-adenosylhomocysteine deaminase activity
GOQ09_14695	COG2925	Exonuclease
GOQ09_14700	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
GOQ09_14705	COG0542	response to heat
GOQ09_14710	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
GOQ09_14735	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
GOQ09_14740	COG1570	exodeoxyribonuclease VII activity
GOQ09_14745	COG0811	peptide transport
GOQ09_14750	COG0848	biopolymer transport protein
GOQ09_14755	COG1663	tetraacyldisaccharide 4'-kinase activity
GOQ09_14760	COG2835	tetraacyldisaccharide 4'-kinase activity
GOQ09_14765	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
GOQ09_14770	COG0563	adenylate kinase activity
GOQ09_14775	COG0252	asparaginase activity
GOQ09_14780	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
GOQ09_14790	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
GOQ09_14795	COG2814	Major facilitator Superfamily
GOQ09_14800	COG1250	3-hydroxyacyl-CoA dehydrogenase
GOQ09_14805	COG1024	Enoyl-CoA hydratase
GOQ09_14810	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
GOQ09_14830	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
GOQ09_14840	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
GOQ09_14845	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
GOQ09_14850	COG1534	Rna-binding protein
GOQ09_14865	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
GOQ09_14875	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
GOQ09_14885	COG0505	Belongs to the CarA family
GOQ09_14890	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
GOQ09_14895	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
GOQ09_14900	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
GOQ09_14905	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
GOQ09_14910	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
GOQ09_14915	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
GOQ09_14930	COG0750	zinc metalloprotease
GOQ09_14935	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
GOQ09_14940	COG0575	Belongs to the CDS family
GOQ09_14950	COG0233	cytoplasmic translational termination
GOQ09_14955	COG0528	UMP kinase activity
GOQ09_14960	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
GOQ09_14965	COG0052	Belongs to the universal ribosomal protein uS2 family
GOQ09_14980	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
GOQ09_14980	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
GOQ09_14985	COG1028	Short-chain dehydrogenase reductase Sdr
GOQ09_14990	COG0557	exoribonuclease II activity
GOQ09_15010	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
GOQ09_15015	COG5394	Polyhydroxyalkanoate synthesis repressor PhaR
GOQ09_15030	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
GOQ09_15040	COG1028	Short-chain dehydrogenase reductase Sdr
GOQ09_15055	COG0745	RESPONSE REGULATOR receiver
GOQ09_15060	COG2205	protein histidine kinase activity
GOQ09_15065	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
GOQ09_15065	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
GOQ09_15070	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
GOQ09_15070	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
GOQ09_15075	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
GOQ09_15080	COG0560	Phosphoserine phosphatase
GOQ09_15100	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
GOQ09_15105	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
GOQ09_15110	COG1028	Short-chain dehydrogenase reductase Sdr
GOQ09_15125	COG0368	Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
GOQ09_15130	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
GOQ09_15135	COG1492	cobalamin metabolic process
GOQ09_15150	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
GOQ09_15170	COG1346	cytolysis
GOQ09_15180	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
GOQ09_15190	COG2109	Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids
GOQ09_15195	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
GOQ09_15200	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
GOQ09_15215	COG4206	TonB-dependent receptor
GOQ09_15230	COG0730	response to heat
GOQ09_15245	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
GOQ09_15260	COG0318	PFAM AMP-dependent synthetase and ligase
GOQ09_15265	COG1024	Enoyl-CoA hydratase
GOQ09_15280	COG1802	Transcriptional regulator
GOQ09_15285	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
GOQ09_15295	COG1028	Short-chain dehydrogenase reductase Sdr
GOQ09_15300	COG0583	DNA-binding transcription factor activity
GOQ09_15305	COG0583	DNA-binding transcription factor activity
GOQ09_15310	COG0129	dihydroxy-acid dehydratase activity
GOQ09_15325	COG4654	Cytochrome c, class I
GOQ09_15335	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
GOQ09_15345	COG0583	DNA-binding transcription factor activity
GOQ09_15350	COG2910	NAD(P)H-binding
GOQ09_15355	COG0114	fumarate hydratase activity
GOQ09_15365	COG4176	ABC-type proline glycine betaine transport system permease component
GOQ09_15370	COG2113	Glycine betaine
GOQ09_15380	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
GOQ09_15415	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
GOQ09_15420	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
GOQ09_15425	COG0740	serine-type endopeptidase activity
GOQ09_15430	COG0544	peptidyl-prolyl cis-trans isomerase activity
GOQ09_15445	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
GOQ09_15460	COG1562	ergosterol biosynthetic process
GOQ09_15465	COG3349	Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'
GOQ09_15480	COG1011	Hydrolase
GOQ09_15485	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
GOQ09_15510	COG0410	ABC transporter
GOQ09_15515	COG0411	ABC transporter
GOQ09_15530	COG0443	Heat shock 70 kDa protein
GOQ09_15585	COG0642	Histidine kinase
GOQ09_15595	COG2326	polyphosphate kinase activity
GOQ09_15735	COG0740	serine-type endopeptidase activity
GOQ09_15875	COG0582	viral genome integration into host DNA
GOQ09_15885	COG0527	aspartate kinase activity
GOQ09_15890	COG0037	tRNA processing
GOQ09_15895	COG0825	malonyl-CoA metabolic process
GOQ09_15905	COG0215	cysteine-tRNA ligase activity
GOQ09_15925	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
GOQ09_15930	COG3228	Belongs to the MtfA family
GOQ09_15950	COG0741	lytic transglycosylase activity
GOQ09_15955	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
GOQ09_15960	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
GOQ09_15995	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
GOQ09_15995	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
GOQ09_16010	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
GOQ09_16015	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
GOQ09_16020	COG0436	Aminotransferase
GOQ09_16025	COG0824	Thioesterase
GOQ09_16035	COG0848	biopolymer transport protein
GOQ09_16060	COG1741	Belongs to the pirin family
GOQ09_16070	COG2259	Doxx family
GOQ09_16075	COG1741	Belongs to the pirin family
GOQ09_16085	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
GOQ09_16085	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
GOQ09_16090	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
GOQ09_16095	COG0220	tRNA (guanine-N7-)-methyltransferase activity
GOQ09_16110	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
GOQ09_16135	COG3976	FMN-binding domain protein
GOQ09_16135	COG1053	succinate dehydrogenase
GOQ09_16145	COG0235	Class ii aldolase
GOQ09_16195	COG3842	ATPase activity
GOQ09_16215	COG0784	Response regulator, receiver
GOQ09_16215	COG2198	Histidine kinase
GOQ09_16215	COG2205	protein histidine kinase activity
GOQ09_16220	COG3437	response regulator, receiver
GOQ09_16240	COG0308	aminopeptidase N
GOQ09_16255	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
GOQ09_16300	COG1960	acyl-CoA dehydrogenase activity
GOQ09_16340	COG1596	polysaccharide export
GOQ09_16345	COG3206	protein involved in exopolysaccharide biosynthesis
GOQ09_16345	COG0489	protein tyrosine kinase activity
GOQ09_16350	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
GOQ09_16355	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
GOQ09_16385	COG0297	glycogen (starch) synthase activity
GOQ09_16390	COG2197	response regulator
GOQ09_16420	COG0587	DNA-directed DNA polymerase activity
GOQ09_16425	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
GOQ09_16490	COG2267	carboxylic ester hydrolase activity
GOQ09_16495	COG3384	dioxygenase
GOQ09_16505	COG2197	response regulator
GOQ09_16520	COG1132	(ABC) transporter
GOQ09_16530	COG1309	transcriptional regulator
GOQ09_16540	COG1160	GTP binding
GOQ09_16550	COG1529	Aldehyde oxidase and xanthine dehydrogenase
GOQ09_16555	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
GOQ09_16560	COG2080	2 iron, 2 sulfur cluster binding
GOQ09_16575	COG1272	protein, Hemolysin III
GOQ09_16595	COG0640	Transcriptional regulator
GOQ09_16605	COG1183	phosphatidylcholine synthase activity
GOQ09_16610	COG0625	glutathione transferase activity
GOQ09_16635	COG1360	Flagellar Motor Protein
GOQ09_16660	COG2079	MmgE PrpD family protein
GOQ09_16685	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
GOQ09_16690	COG0583	DNA-binding transcription factor activity
GOQ09_16700	COG1024	Enoyl-CoA hydratase
GOQ09_16750	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
GOQ09_16755	COG1804	L-carnitine dehydratase bile acid-inducible protein F
GOQ09_16760	COG0583	DNA-binding transcription factor activity
GOQ09_16780	COG3131	Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs)
GOQ09_16790	COG1028	Short-chain dehydrogenase reductase Sdr
GOQ09_16795	COG0545	Peptidyl-prolyl cis-trans isomerase
GOQ09_16800	COG0531	amino acid
GOQ09_16805	COG4303	Ethanolamine ammonia lyase large subunit
GOQ09_16810	COG4302	ethanolamine ammonia-lyase activity
GOQ09_16840	COG0745	RESPONSE REGULATOR receiver
GOQ09_16845	COG0642	Histidine kinase
GOQ09_16850	COG0824	Thioesterase
GOQ09_16860	COG1028	Short-chain dehydrogenase reductase Sdr
GOQ09_16880	COG4336	lyase activity
GOQ09_16885	COG0583	DNA-binding transcription factor activity
GOQ09_16890	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
GOQ09_16895	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
GOQ09_16915	COG0404	The glycine cleavage system catalyzes the degradation of glycine
GOQ09_16920	COG0509	glycine decarboxylation via glycine cleavage system
GOQ09_16925	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
GOQ09_16925	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
GOQ09_16960	COG1215	transferase activity, transferring glycosyl groups
GOQ09_16970	COG2197	response regulator
GOQ09_16995	COG2249	NAD(P)H dehydrogenase (quinone) activity
GOQ09_17005	COG0251	oxidation-reduction process
GOQ09_17020	COG0477	Major facilitator Superfamily
GOQ09_17035	COG2814	Major facilitator Superfamily
GOQ09_17040	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
GOQ09_17065	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
GOQ09_17070	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
GOQ09_17075	COG1414	Transcriptional regulator
GOQ09_17140	COG3501	Rhs element vgr protein
GOQ09_17150	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
GOQ09_17195	COG0477	Major facilitator Superfamily
GOQ09_17205	COG0640	Transcriptional regulator
GOQ09_17225	COG1960	acyl-CoA dehydrogenase activity
GOQ09_17240	COG3264	Mechanosensitive ion channel
GOQ09_17240	COG1511	domain protein
GOQ09_17250	COG0714	Associated with various cellular activities
GOQ09_17265	COG2951	lytic endotransglycosylase activity
GOQ09_17295	COG1131	(ABC) transporter
GOQ09_17330	COG0395	ABC-type sugar transport system, permease component
GOQ09_17345	COG3842	ATPase activity
GOQ09_17360	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
GOQ09_17375	COG2308	Evidence 4 Homologs of previously reported genes of
GOQ09_17400	COG1305	Transglutaminase-like
GOQ09_17415	COG1609	Transcriptional regulator
GOQ09_17425	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
GOQ09_17435	COG1126	abc transporter atp-binding protein
GOQ09_17445	COG0765	amino acid transport
GOQ09_17450	COG0765	amino acid transport
GOQ09_17495	COG0739	heme binding
GOQ09_17495	COG0741	lytic transglycosylase activity
GOQ09_17495	COG1196	nuclear chromosome segregation
GOQ09_17500	COG0187	DNA topoisomerase II activity
GOQ09_17520	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
GOQ09_17525	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
GOQ09_17530	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
GOQ09_17545	COG2850	peptidyl-arginine hydroxylation
GOQ09_17550	COG1047	Peptidyl-prolyl cis-trans
GOQ09_17560	COG0756	dUTP diphosphatase activity
GOQ09_17570	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
GOQ09_17575	COG0504	CTP synthase activity
GOQ09_17580	COG2877	3-deoxy-8-phosphooctulonate synthase activity
GOQ09_17590	COG0148	phosphopyruvate hydratase activity
GOQ09_17595	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
GOQ09_17600	COG3201	nicotinamide mononucleotide transporter
GOQ09_17620	COG1028	Short-chain dehydrogenase reductase Sdr
GOQ09_17630	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
GOQ09_17640	COG2833	Protein of unknown function (DUF455)
GOQ09_17650	COG0183	Belongs to the thiolase family
GOQ09_17660	COG3181	Tripartite tricarboxylate transporter family receptor
GOQ09_17675	COG4974	Belongs to the 'phage' integrase family
GOQ09_17680	COG3181	Tripartite tricarboxylate transporter family receptor
GOQ09_17690	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
GOQ09_17695	COG0802	atpase or kinase
GOQ09_17700	COG0860	N-Acetylmuramoyl-L-alanine amidase
GOQ09_17710	COG0586	Pfam SNARE associated Golgi protein
GOQ09_17715	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
GOQ09_17725	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
GOQ09_17730	COG4181	ATPase activity
GOQ09_17740	COG2186	Transcriptional regulator
GOQ09_17795	COG0559	Belongs to the binding-protein-dependent transport system permease family
GOQ09_17825	COG1566	PFAM secretion protein HlyD family protein
GOQ09_17835	COG1846	Transcriptional regulator
GOQ09_17840	COG1132	(ABC) transporter
GOQ09_17860	COG1007	ATP synthesis coupled electron transport
GOQ09_17875	COG0713	ATP synthesis coupled electron transport
GOQ09_17885	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
GOQ09_17890	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
GOQ09_17895	COG1034	ATP synthesis coupled electron transport
GOQ09_17910	COG0649	NAD binding
GOQ09_17915	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
GOQ09_17920	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
GOQ09_17925	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
GOQ09_17940	COG0149	triose-phosphate isomerase activity
GOQ09_17950	COG1185	polyribonucleotide nucleotidyltransferase activity
GOQ09_17955	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
GOQ09_17965	COG0683	leucine binding
GOQ09_17980	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
GOQ09_17985	COG3707	response regulator
GOQ09_17990	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
GOQ09_17995	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
GOQ09_18000	COG1116	anion transmembrane transporter activity
GOQ09_18010	COG2223	nitrite transmembrane transporter activity
GOQ09_18020	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
GOQ09_18035	COG0243	molybdopterin cofactor binding
GOQ09_18040	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
GOQ09_18060	COG1176	ABC-type spermidine putrescine transport system, permease component I
GOQ09_18065	COG3833	ABC-type maltose transport systems, permease component
GOQ09_18075	COG0791	NLP P60 protein
GOQ09_18080	COG2081	HI0933 family
GOQ09_18085	COG0828	Belongs to the bacterial ribosomal protein bS21 family
GOQ09_18090	COG1610	YqeY-like protein
GOQ09_18095	COG0494	nUDIX hydrolase
GOQ09_18110	COG1063	alcohol dehydrogenase
GOQ09_18115	COG3842	ATPase activity
GOQ09_18120	COG0395	ABC-type sugar transport system, permease component
GOQ09_18145	COG4977	sequence-specific DNA binding
GOQ09_18145	COG1917	Cupin 2, conserved barrel domain protein
GOQ09_18155	COG0312	modulator of DNA gyrase
GOQ09_18165	COG0521	Mo-molybdopterin cofactor biosynthetic process
GOQ09_18180	COG0475	glutathione-regulated potassium exporter activity
GOQ09_18200	COG0789	Transcriptional regulator
GOQ09_18210	COG1045	serine acetyltransferase
GOQ09_18225	COG1289	transmembrane transporter activity
GOQ09_18235	COG2311	Membrane
GOQ09_18255	COG3119	arylsulfatase activity
GOQ09_18260	COG1802	Transcriptional regulator
GOQ09_18270	COG1804	L-carnitine dehydratase bile acid-inducible protein F
GOQ09_18310	COG2375	cellular response to nickel ion
GOQ09_18315	COG0598	Magnesium transport protein CorA
GOQ09_18325	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
GOQ09_18340	COG2197	response regulator
GOQ09_18360	COG1968	undecaprenyl-diphosphatase activity
GOQ09_18370	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
GOQ09_18375	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
GOQ09_18380	COG1737	Transcriptional regulator
GOQ09_18390	COG1538	Outer membrane efflux protein
GOQ09_18400	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
GOQ09_18405	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
GOQ09_18420	COG2972	Histidine kinase
GOQ09_18435	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
GOQ09_18455	COG0004	ammonium transporteR
GOQ09_18480	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
GOQ09_18500	COG0789	Transcriptional regulator
GOQ09_18510	COG1028	Short-chain dehydrogenase reductase Sdr
GOQ09_18515	COG2201	protein-glutamate methylesterase activity
GOQ09_18520	COG2918	glutathione biosynthetic process
GOQ09_18535	COG0523	cobalamin synthesis protein
GOQ09_18565	COG2354	Protein conserved in bacteria
GOQ09_18575	COG4628	conserved protein (DUF2132)
GOQ09_18590	COG0564	pseudouridine synthase activity
GOQ09_18610	COG4301	Catalyzes the SAM-dependent triple methylation of the alpha-amino group of histidine to form hercynine, a step in the biosynthesis pathway of ergothioneine
GOQ09_18615	COG1262	PFAM Formylglycine-generating sulfatase enzyme
GOQ09_18620	COG1252	NADH dehydrogenase
GOQ09_18630	COG1525	nuclease
GOQ09_18635	COG0318	PFAM AMP-dependent synthetase and ligase
GOQ09_18640	COG1764	response to oxidative stress
GOQ09_18655	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
GOQ09_18660	COG0765	amino acid transport
GOQ09_18665	COG0765	amino acid transport
GOQ09_18685	COG0584	glycerophosphoryl diester phosphodiesterase
GOQ09_18705	COG3191	aminopeptidase activity
GOQ09_18715	COG0488	(ABC) transporter
GOQ09_18720	COG0513	Belongs to the DEAD box helicase family
GOQ09_18740	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
GOQ09_18745	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
GOQ09_18750	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
GOQ09_18755	COG2186	Transcriptional regulator
GOQ09_18760	COG0129	dihydroxy-acid dehydratase activity
GOQ09_18770	COG0800	Aldolase
GOQ09_18775	COG0235	Class ii aldolase
GOQ09_18810	COG1840	ABC-type Fe3 transport system, periplasmic component
GOQ09_18820	COG3842	ATPase activity
GOQ09_18830	COG0346	lactoylglutathione lyase activity
GOQ09_18840	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
GOQ09_18850	COG0800	Aldolase
GOQ09_18875	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
GOQ09_18880	COG0259	pyridoxamine-phosphate oxidase activity
GOQ09_18895	COG0679	Auxin Efflux Carrier
GOQ09_18910	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
GOQ09_18915	COG1309	transcriptional regulator
GOQ09_18920	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
GOQ09_18945	COG2169	Transcriptional regulator
GOQ09_18955	COG0697	spore germination
GOQ09_18975	COG0625	glutathione transferase activity
GOQ09_19045	COG2831	hemolysin activation secretion protein
GOQ09_19060	COG4774	siderophore transport
GOQ09_19125	COG0583	DNA-binding transcription factor activity
GOQ09_19145	COG0671	phosphoesterase, PA-phosphatase related
GOQ09_19160	COG0693	protein deglycase activity
GOQ09_19180	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
GOQ09_19205	COG0285	dihydrofolate synthase activity
GOQ09_19210	COG1393	Belongs to the ArsC family
GOQ09_19220	COG3123	guanosine phosphorylase activity
GOQ09_19225	COG0137	argininosuccinate synthase activity
GOQ09_19235	COG0812	UDP-N-acetylmuramate dehydrogenase activity
GOQ09_19240	COG1666	GTP binding
GOQ09_19250	COG0251	oxidation-reduction process
GOQ09_19255	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
GOQ09_19260	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
GOQ09_19265	COG0667	Aldo Keto reductase
GOQ09_19270	COG2267	carboxylic ester hydrolase activity
GOQ09_19285	COG1464	Belongs to the NlpA lipoprotein family
GOQ09_19290	COG2011	ABC-type metal ion transport system permease component
GOQ09_19295	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
GOQ09_19300	COG1464	Belongs to the NlpA lipoprotein family
GOQ09_19310	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
GOQ09_19315	COG0308	aminopeptidase N
GOQ09_19325	COG0158	D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1
GOQ09_19335	COG1403	HNH endonuclease
GOQ09_19360	COG3386	PFAM SMP-30 Gluconolaconase
GOQ09_19375	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
GOQ09_19380	COG0583	DNA-binding transcription factor activity
GOQ09_19390	COG3181	Tripartite tricarboxylate transporter family receptor
GOQ09_19400	COG1917	Cupin 2, conserved barrel domain protein
GOQ09_19400	COG4977	sequence-specific DNA binding
GOQ09_19410	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
GOQ09_19425	COG1595	DNA-templated transcription, initiation
GOQ09_19450	COG0583	DNA-binding transcription factor activity
GOQ09_19475	COG1253	flavin adenine dinucleotide binding
GOQ09_19480	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
GOQ09_19485	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
GOQ09_19495	COG1116	anion transmembrane transporter activity
GOQ09_19500	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
GOQ09_19505	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
GOQ09_19520	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
GOQ09_19525	COG1960	acyl-CoA dehydrogenase activity
GOQ09_19530	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
GOQ09_19545	COG4977	sequence-specific DNA binding
GOQ09_19555	COG2076	Multidrug Resistance protein
GOQ09_19560	COG0513	Belongs to the DEAD box helicase family
GOQ09_19565	COG2321	neutral zinc metallopeptidase
GOQ09_19570	COG0717	Belongs to the dCTP deaminase family
GOQ09_19575	COG0402	S-adenosylhomocysteine deaminase activity
GOQ09_19590	COG0583	DNA-binding transcription factor activity
GOQ09_19600	COG0583	DNA-binding transcription factor activity
GOQ09_19605	COG2814	Major facilitator Superfamily
GOQ09_19610	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
GOQ09_19625	COG1309	transcriptional regulator
GOQ09_19630	COG1819	glycosyl
GOQ09_19685	COG2252	PERMEase
GOQ09_19695	COG1529	Aldehyde oxidase and xanthine dehydrogenase
GOQ09_19730	COG3181	Tripartite tricarboxylate transporter family receptor
GOQ09_19750	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
GOQ09_19780	COG2351	hydroxyisourate hydrolase activity
GOQ09_19785	COG2186	Transcriptional regulator
GOQ09_19800	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
GOQ09_19805	COG0596	Alpha beta hydrolase
GOQ09_19815	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
GOQ09_19830	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
GOQ09_19835	COG0456	acetyltransferase
GOQ09_19855	COG1953	Uracil, thiamine, allantoin
GOQ09_19875	COG0656	L-ascorbic acid biosynthetic process
GOQ09_19880	COG2814	Major facilitator Superfamily
GOQ09_19905	COG2205	protein histidine kinase activity
GOQ09_19935	COG3180	Ammonia monooxygenase
GOQ09_19985	COG1131	(ABC) transporter
GOQ09_19990	COG4771	TonB-dependent receptor
GOQ09_20045	COG0745	RESPONSE REGULATOR receiver
GOQ09_20055	COG1301	dicarboxylic acid transport
GOQ09_20065	COG0628	permease
GOQ09_20080	COG0583	DNA-binding transcription factor activity
GOQ09_20085	COG3960	tartronate-semialdehyde synthase activity
GOQ09_20090	COG3622	Belongs to the hyi family
GOQ09_20095	COG2084	Dehydrogenase
GOQ09_20105	COG0280	phosphate acetyltransferase
GOQ09_20105	COG0281	malic enzyme
GOQ09_20120	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
GOQ09_20130	COG1116	anion transmembrane transporter activity
GOQ09_20135	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
GOQ09_20160	COG1733	regulation of RNA biosynthetic process
GOQ09_20175	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
GOQ09_20185	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
GOQ09_20190	COG0590	tRNA wobble adenosine to inosine editing
GOQ09_20195	COG0829	nickel cation binding
GOQ09_20220	COG2879	small protein
GOQ09_20225	COG1966	Carbon starvation protein
GOQ09_20230	COG0791	NLP P60 protein
GOQ09_20250	COG0318	PFAM AMP-dependent synthetase and ligase
GOQ09_20270	COG0024	Methionine aminopeptidase
GOQ09_20280	COG0346	lactoylglutathione lyase activity
GOQ09_20285	COG5002	protein histidine kinase activity
GOQ09_20320	COG0300	oxidoreductase activity
GOQ09_20335	COG1028	Short-chain dehydrogenase reductase Sdr
GOQ09_20380	COG4948	Mandelate Racemase Muconate Lactonizing
GOQ09_20385	COG0583	DNA-binding transcription factor activity
GOQ09_20410	COG0417	DNA replication proofreading
GOQ09_20430	COG0667	Aldo Keto reductase
GOQ09_20435	COG2814	Major facilitator Superfamily
GOQ09_20455	COG0559	Belongs to the binding-protein-dependent transport system permease family
GOQ09_20490	COG0613	PHP domain protein
GOQ09_20500	COG0009	L-threonylcarbamoyladenylate synthase
GOQ09_20505	COG1994	Peptidase M50
GOQ09_20510	COG0180	Tryptophanyl-tRNA synthetase
GOQ09_20515	COG2197	response regulator
GOQ09_20520	COG2198	Histidine kinase
GOQ09_20520	COG0784	Response regulator, receiver
GOQ09_20520	COG2205	protein histidine kinase activity
GOQ09_20530	COG1476	TRANSCRIPTIONal
GOQ09_20545	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
GOQ09_20550	COG2764	glyoxalase bleomycin resistance protein dioxygenase
GOQ09_20555	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
GOQ09_20560	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
GOQ09_20565	COG1047	Peptidyl-prolyl cis-trans
GOQ09_20570	COG2003	Belongs to the UPF0758 family
GOQ09_20595	COG0765	amino acid transport
GOQ09_20600	COG0765	amino acid transport
GOQ09_20610	COG3491	Belongs to the iron ascorbate-dependent oxidoreductase family
GOQ09_20615	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
GOQ09_20620	COG0477	Major facilitator Superfamily
GOQ09_20625	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
GOQ09_20630	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
GOQ09_20635	COG1845	cytochrome c oxidase, subunit III
GOQ09_20640	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
GOQ09_20655	COG4567	Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain
GOQ09_20660	COG1272	protein, Hemolysin III
GOQ09_20675	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
GOQ09_20680	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
GOQ09_20700	COG0437	4 iron, 4 sulfur cluster binding
GOQ09_20705	COG3383	formate dehydrogenase (NAD+) activity
GOQ09_20705	COG0243	molybdopterin cofactor binding
GOQ09_20740	COG0725	ABC transporter, periplasmic molybdate-binding protein
GOQ09_20745	COG4149	molybdate abc transporter
GOQ09_20755	COG3383	formate dehydrogenase (NAD+) activity
GOQ09_20765	COG0583	DNA-binding transcription factor activity
GOQ09_20770	COG0489	protein tyrosine kinase activity
GOQ09_20795	COG3132	Protein of unknown function, DUF480
GOQ09_20800	COG3698	Phosphodiester glycosidase
GOQ09_20805	COG0473	3-isopropylmalate dehydrogenase activity
GOQ09_20810	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
GOQ09_20810	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
GOQ09_20820	COG0659	secondary active sulfate transmembrane transporter activity
GOQ09_20840	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
GOQ09_20845	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
GOQ09_20850	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
GOQ09_20855	COG0602	queuosine metabolic process
GOQ09_20865	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
GOQ09_20875	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
GOQ09_20880	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
GOQ09_20890	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
GOQ09_20895	COG0588	phosphoglycerate mutase activity
GOQ09_20900	COG0793	Belongs to the peptidase S41A family
GOQ09_20905	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
GOQ09_20910	COG2982	Protein involved in outer membrane biogenesis
GOQ09_20920	COG2197	response regulator
GOQ09_20980	COG3568	Endonuclease Exonuclease Phosphatase
GOQ09_20985	COG0494	nUDIX hydrolase
GOQ09_20990	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
GOQ09_21005	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
GOQ09_21010	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
GOQ09_21025	COG2226	methyltransferase
GOQ09_21045	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
GOQ09_21055	COG1175	transmembrane transport
GOQ09_21060	COG0395	ABC-type sugar transport system, permease component
GOQ09_21065	COG3842	ATPase activity
GOQ09_21070	COG0584	glycerophosphoryl diester phosphodiesterase
GOQ09_21075	COG3264	Mechanosensitive ion channel
GOQ09_21075	COG1511	domain protein
GOQ09_21090	COG2831	hemolysin activation secretion protein
GOQ09_21100	COG3210	domain, Protein
GOQ09_21105	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
GOQ09_21110	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
GOQ09_21125	COG1191	sigma factor activity
GOQ09_21130	COG0789	Transcriptional regulator
GOQ09_21145	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
GOQ09_21150	COG0745	RESPONSE REGULATOR receiver
GOQ09_21165	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
GOQ09_21170	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
GOQ09_21220	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
GOQ09_21225	COG1334	flagellar protein FlaG
GOQ09_21240	COG1766	The M ring may be actively involved in energy transduction
GOQ09_21245	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
GOQ09_21250	COG1317	bacterial-type flagellum organization
GOQ09_21260	COG2882	bacterial-type flagellum organization
GOQ09_21270	COG1580	Controls the rotational direction of flagella during chemotaxis
GOQ09_21290	COG1338	Plays a role in the flagellum-specific transport system
GOQ09_21295	COG1987	bacterial-type flagellum assembly
GOQ09_21310	COG1256	bacterial-type flagellum assembly
GOQ09_21320	COG0840	transmembrane signaling receptor activity
GOQ09_21330	COG0840	transmembrane signaling receptor activity
GOQ09_21335	COG0835	chemotaxis
GOQ09_21340	COG0840	transmembrane signaling receptor activity
GOQ09_21350	COG0835	chemotaxis
GOQ09_21355	COG1705	Flagellar rod assembly protein muramidase FlgJ
GOQ09_21355	COG3951	Flagellar rod assembly protein muramidase FlgJ
GOQ09_21365	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
GOQ09_21370	COG4786	Flagellar basal body rod
GOQ09_21375	COG4787	bacterial-type flagellum-dependent cell motility
GOQ09_21380	COG1749	Flagellar hook protein flgE
GOQ09_21385	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
GOQ09_21390	COG1558	bacterial-type flagellum-dependent cell motility
GOQ09_21395	COG1815	bacterial-type flagellum-dependent cell motility
GOQ09_21425	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
GOQ09_21430	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
GOQ09_21440	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
GOQ09_21450	COG1253	flavin adenine dinucleotide binding
GOQ09_21455	COG0741	lytic transglycosylase activity
GOQ09_21460	COG0442	prolyl-tRNA aminoacylation
GOQ09_21465	COG0494	nUDIX hydrolase
GOQ09_21475	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
GOQ09_21480	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
GOQ09_21485	COG0211	Belongs to the bacterial ribosomal protein bL27 family
GOQ09_21490	COG0261	This protein binds to 23S rRNA in the presence of protein L20
GOQ09_21495	COG0142	geranyltranstransferase activity
GOQ09_21525	COG1696	Membrane protein involved in D-alanine export
GOQ09_21535	COG4582	Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity
GOQ09_21540	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
GOQ09_21545	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
GOQ09_21545	COG2755	lipolytic protein G-D-S-L family
GOQ09_21550	COG0494	nUDIX hydrolase
GOQ09_21560	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
GOQ09_21565	COG0653	protein targeting
GOQ09_21580	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
GOQ09_21585	COG0583	DNA-binding transcription factor activity
GOQ09_21600	COG0784	Response regulator, receiver
GOQ09_21600	COG2205	protein histidine kinase activity
GOQ09_21600	COG5002	protein histidine kinase activity
GOQ09_21605	COG0831	urea catabolic process
GOQ09_21615	COG0832	Belongs to the urease beta subunit family
GOQ09_21620	COG0804	urea catabolic process
GOQ09_21625	COG2371	Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly
GOQ09_21630	COG0830	nickel cation binding
GOQ09_21635	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
GOQ09_21650	COG2982	Protein involved in outer membrane biogenesis
GOQ09_21710	COG2274	protein secretion by the type I secretion system
GOQ09_21765	COG0635	Involved in the biosynthesis of porphyrin-containing compound
GOQ09_21770	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
GOQ09_21785	COG0515	serine threonine protein kinase
GOQ09_21785	COG2815	serine threonine protein kinase
GOQ09_21790	COG1561	YicC-like family, N-terminal region
GOQ09_21795	COG0194	GDP metabolic process
GOQ09_21800	COG1758	RNA polymerase activity
GOQ09_21805	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
GOQ09_21835	COG1420	regulation of RNA biosynthetic process
GOQ09_21840	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
GOQ09_21845	COG0497	DNA recombination
GOQ09_21850	COG1660	Displays ATPase and GTPase activities
GOQ09_21860	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
GOQ09_21865	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
GOQ09_21880	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
GOQ09_21890	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
GOQ09_21895	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
GOQ09_21900	COG0193	aminoacyl-tRNA hydrolase activity
GOQ09_21910	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
GOQ09_21920	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
GOQ09_21930	COG4608	Belongs to the ABC transporter superfamily
GOQ09_21935	COG0747	negative chemotaxis
GOQ09_21940	COG0154	amidase activity
GOQ09_21950	COG0583	DNA-binding transcription factor activity
GOQ09_21975	COG2267	carboxylic ester hydrolase activity
GOQ09_21980	COG2039	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
GOQ09_21985	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
GOQ09_21990	COG1984	allophanate hydrolase subunit 2
GOQ09_21995	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
GOQ09_22000	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
GOQ09_22005	COG0742	ribosomal rna small subunit methyltransferase
GOQ09_22020	COG0612	Peptidase, M16
GOQ09_22025	COG0612	Peptidase, M16
GOQ09_22040	COG2205	protein histidine kinase activity
GOQ09_22040	COG0784	Response regulator, receiver
GOQ09_22045	COG2197	response regulator
GOQ09_22055	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
GOQ09_22060	COG4335	DNA alkylation repair
GOQ09_22065	COG1999	signal sequence binding
GOQ09_22070	COG0109	protoheme IX farnesyltransferase activity
GOQ09_22105	COG3175	Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I
GOQ09_22125	COG2226	methyltransferase
GOQ09_22130	COG1040	competence protein
GOQ09_22135	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
GOQ09_22145	COG0489	protein tyrosine kinase activity
GOQ09_22165	COG1024	Enoyl-CoA hydratase
GOQ09_22170	COG0318	PFAM AMP-dependent synthetase and ligase
GOQ09_22185	COG1960	acyl-CoA dehydrogenase activity
GOQ09_22200	COG2764	glyoxalase bleomycin resistance protein dioxygenase
GOQ09_22215	COG5507	3-demethylubiquinone-9 3-methyltransferase
GOQ09_22235	COG2114	Pfam Adenylate and Guanylate cyclase catalytic domain
GOQ09_22245	COG0430	RNA-3'-phosphate cyclase activity
GOQ09_22250	COG3541	Predicted nucleotidyltransferase
GOQ09_22255	COG1234	tRNA 3'-trailer cleavage
GOQ09_22265	COG1690	Belongs to the RtcB family
GOQ09_22280	COG4650	regulator
GOQ09_22285	COG1073	alpha beta
GOQ09_22310	COG1764	response to oxidative stress
GOQ09_22315	COG0745	RESPONSE REGULATOR receiver
GOQ09_22325	COG3181	Tripartite tricarboxylate transporter family receptor
GOQ09_22330	COG3181	Tripartite tricarboxylate transporter family receptor
GOQ09_22335	COG0183	Belongs to the thiolase family
GOQ09_22340	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
GOQ09_22350	COG1414	Transcriptional regulator
GOQ09_22360	COG3063	Type IV pilus biogenesis stability protein PilW
GOQ09_22385	COG4964	Belongs to the GSP D family
GOQ09_22445	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
GOQ09_22460	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
GOQ09_22480	COG0583	DNA-binding transcription factor activity
GOQ09_22485	COG3485	protocatechuate 3,4-dioxygenase
GOQ09_22490	COG3485	protocatechuate 3,4-dioxygenase
GOQ09_22500	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
GOQ09_22535	COG0583	DNA-binding transcription factor activity
GOQ09_22550	COG0469	pyruvate kinase activity
GOQ09_22555	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
GOQ09_22565	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
GOQ09_22570	COG0045	succinate-CoA ligase (ADP-forming) activity
GOQ09_22580	COG1804	L-carnitine dehydratase bile acid-inducible protein F
GOQ09_22585	COG4191	Histidine kinase
GOQ09_22675	COG0540	Belongs to the ATCase OTCase family
GOQ09_22680	COG2065	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
GOQ09_22685	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
GOQ09_22690	COG1678	Uncharacterized ACR, COG1678
GOQ09_22695	COG0415	Belongs to the DNA photolyase family
GOQ09_22705	COG0840	transmembrane signaling receptor activity
GOQ09_22725	COG1773	rubredoxin
GOQ09_22730	COG0352	thiamine-phosphate diphosphorylase activity
GOQ09_22730	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
GOQ09_22730	COG0351	phosphomethylpyrimidine kinase
GOQ09_22735	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
GOQ09_22740	COG0138	bifunctional purine biosynthesis protein purh
GOQ09_22755	COG1238	metal cluster binding
GOQ09_22765	COG0012	GTP binding
GOQ09_22770	COG1879	ABC-type sugar transport system periplasmic component
GOQ09_22775	COG1129	ABC transporter
GOQ09_22780	COG1172	Belongs to the binding-protein-dependent transport system permease family
GOQ09_22785	COG1609	Transcriptional regulator
GOQ09_22790	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
GOQ09_22795	COG1869	D-ribose catabolic process
GOQ09_22810	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
GOQ09_22815	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
GOQ09_22825	COG1024	Enoyl-CoA hydratase
GOQ09_22845	COG1309	transcriptional regulator
GOQ09_22855	COG3145	DNA-N1-methyladenine dioxygenase activity
GOQ09_22860	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
GOQ09_22870	COG2863	cytochrome
GOQ09_22875	COG2010	Cytochrome c
GOQ09_22875	COG1529	Aldehyde oxidase and xanthine dehydrogenase
GOQ09_22890	COG1230	cation diffusion facilitator family transporter
GOQ09_22895	COG2255	four-way junction helicase activity
GOQ09_22900	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
GOQ09_22905	COG2267	carboxylic ester hydrolase activity
GOQ09_22925	COG4589	Belongs to the CDS family
GOQ09_22940	COG0632	four-way junction helicase activity
GOQ09_22945	COG1702	phosphate starvation-inducible protein PhoH
GOQ09_22950	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
GOQ09_22955	COG4106	trans-aconitate 2-methyltransferase activity
GOQ09_22960	COG1490	D-aminoacyl-tRNA deacylase activity
GOQ09_22965	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
GOQ09_22985	COG0739	heme binding
GOQ09_22990	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
GOQ09_22995	COG0316	Belongs to the HesB IscA family
GOQ09_23000	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GOQ09_23005	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
GOQ09_23010	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
GOQ09_23020	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
GOQ09_23025	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
GOQ09_23040	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
GOQ09_23050	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
GOQ09_23080	COG2423	ornithine cyclodeaminase activity
GOQ09_23085	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
GOQ09_23090	COG0683	leucine binding
GOQ09_23100	COG0477	Major facilitator Superfamily
GOQ09_23130	COG1804	L-carnitine dehydratase bile acid-inducible protein F
GOQ09_23145	COG1414	Transcriptional regulator
GOQ09_23150	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
GOQ09_23170	COG1024	Enoyl-CoA hydratase
GOQ09_23175	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
GOQ09_23180	COG0318	PFAM AMP-dependent synthetase and ligase
GOQ09_23185	COG1960	acyl-CoA dehydrogenase activity
GOQ09_23200	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
GOQ09_23205	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
GOQ09_23210	COG3012	SEC-C Motif Domain Protein
GOQ09_23225	COG1408	metallophosphoesterase
GOQ09_23230	COG1960	acyl-CoA dehydrogenase activity
GOQ09_23240	COG0183	Belongs to the thiolase family
GOQ09_23245	COG4579	[isocitrate dehydrogenase (NADP+)] phosphatase activity
GOQ09_23250	COG0288	reversible hydration of carbon dioxide
GOQ09_23255	COG0789	Transcriptional regulator
GOQ09_23290	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
GOQ09_23295	COG0751	glycine-tRNA ligase activity
GOQ09_23300	COG0752	glycyl-tRNA synthetase alpha subunit
GOQ09_23310	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
GOQ09_23315	COG0671	phosphoesterase, PA-phosphatase related
GOQ09_23330	COG0583	DNA-binding transcription factor activity
GOQ09_23335	COG2814	Major facilitator Superfamily
GOQ09_23365	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
GOQ09_23375	COG0815	Transfers the fatty acyl group on membrane lipoproteins
GOQ09_23380	COG4535	Mg2 and Co2 transporter CorC
GOQ09_23390	COG1522	sequence-specific DNA binding
GOQ09_23405	COG3186	Phenylalanine-4-hydroxylase
GOQ09_23410	COG0318	PFAM AMP-dependent synthetase and ligase
GOQ09_23475	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
GOQ09_23520	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
GOQ09_23585	COG0439	Biotin carboxylase
GOQ09_23590	COG0318	PFAM AMP-dependent synthetase and ligase
GOQ09_23605	COG2124	cytochrome p450
GOQ09_23605	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
GOQ09_23615	COG1309	transcriptional regulator
GOQ09_23635	COG1505	serine-type exopeptidase activity
GOQ09_23640	COG0010	Belongs to the arginase family
GOQ09_23655	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
GOQ09_23660	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
GOQ09_23660	COG0506	proline dehydrogenase activity
GOQ09_23660	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
GOQ09_23715	COG2084	Dehydrogenase
GOQ09_23725	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
GOQ09_23730	COG0792	nuclease activity
GOQ09_23735	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
GOQ09_23745	COG2831	hemolysin activation secretion protein
GOQ09_23750	COG3210	domain, Protein
GOQ09_23755	COG2197	response regulator
GOQ09_23760	COG4585	Histidine kinase
GOQ09_23795	COG1309	transcriptional regulator
GOQ09_23800	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
GOQ09_23805	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
GOQ09_23810	COG1538	Outer membrane efflux protein
GOQ09_23860	COG3118	belongs to the thioredoxin family
GOQ09_23865	COG1201	RNA secondary structure unwinding
GOQ09_23870	COG1793	dna ligase
GOQ09_23870	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
GOQ09_23875	COG1793	dna ligase
GOQ09_23875	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
GOQ09_23890	COG0673	inositol 2-dehydrogenase activity
GOQ09_23895	COG1879	ABC-type sugar transport system periplasmic component
GOQ09_23900	COG1172	Belongs to the binding-protein-dependent transport system permease family
GOQ09_23915	COG0355	proton-transporting ATP synthase activity, rotational mechanism
GOQ09_23920	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
GOQ09_23925	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
GOQ09_23930	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
GOQ09_23935	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
GOQ09_23940	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
GOQ09_23950	COG0356	it plays a direct role in the translocation of protons across the membrane
GOQ09_23965	COG2921	Belongs to the UPF0250 family
GOQ09_23970	COG0321	lipoyl(octanoyl) transferase activity
GOQ09_23975	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
GOQ09_23980	COG0318	PFAM AMP-dependent synthetase and ligase
GOQ09_23985	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
GOQ09_24005	COG2130	NADP-dependent
GOQ09_24015	COG0745	RESPONSE REGULATOR receiver
GOQ09_24035	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
GOQ09_24040	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
GOQ09_24050	COG2814	Major facilitator Superfamily
GOQ09_24060	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
GOQ09_24065	COG3909	cytochrome
GOQ09_24080	COG0678	peroxiredoxin activity
GOQ09_24085	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
GOQ09_24090	COG0255	Belongs to the universal ribosomal protein uL29 family
GOQ09_24095	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
GOQ09_24100	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
GOQ09_24105	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
GOQ09_24110	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
GOQ09_24115	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
GOQ09_24120	COG0089	rRNA binding
GOQ09_24125	COG0088	Forms part of the polypeptide exit tunnel
GOQ09_24130	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
GOQ09_24145	COG0051	transcription antitermination factor activity, RNA binding
GOQ09_24150	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
GOQ09_24155	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
GOQ09_24160	COG0049	tRNA binding
GOQ09_24165	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
GOQ09_24170	COG1686	Belongs to the peptidase S11 family
GOQ09_24175	COG2945	thiolester hydrolase activity
GOQ09_24200	COG0598	Magnesium transport protein CorA
GOQ09_24210	COG0583	DNA-binding transcription factor activity
GOQ09_24215	COG0412	Dienelactone hydrolase
GOQ09_24225	COG1028	Short-chain dehydrogenase reductase Sdr
GOQ09_24230	COG2095	MarC family integral membrane protein
GOQ09_24250	COG0410	ABC transporter
GOQ09_24255	COG0411	ABC transporter
GOQ09_24265	COG0559	Belongs to the binding-protein-dependent transport system permease family
GOQ09_24280	COG0027	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
GOQ09_24285	COG1250	3-hydroxyacyl-CoA dehydrogenase
GOQ09_24300	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
GOQ09_24305	COG1652	LysM domain
GOQ09_24315	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
GOQ09_24330	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
GOQ09_24330	COG0574	Belongs to the PEP-utilizing enzyme family
GOQ09_24345	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
GOQ09_24350	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
GOQ09_24360	COG0640	Transcriptional regulator
GOQ09_24375	COG0625	glutathione transferase activity
GOQ09_24380	COG0583	DNA-binding transcription factor activity
GOQ09_24385	COG1131	(ABC) transporter
GOQ09_24395	COG1846	Transcriptional regulator
GOQ09_24400	COG1764	response to oxidative stress
GOQ09_24410	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
GOQ09_24420	COG0326	Molecular chaperone. Has ATPase activity
GOQ09_24425	COG1840	ABC-type Fe3 transport system, periplasmic component
GOQ09_24440	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
GOQ09_24465	COG0642	Histidine kinase
GOQ09_24470	COG0745	RESPONSE REGULATOR receiver
GOQ09_24480	COG1187	pseudouridine synthase activity
GOQ09_24485	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
GOQ09_24505	COG0745	RESPONSE REGULATOR receiver
GOQ09_24510	COG2205	protein histidine kinase activity
GOQ09_24520	COG2156	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
GOQ09_24525	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
GOQ09_24530	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
GOQ09_24545	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
GOQ09_24570	COG1028	Short-chain dehydrogenase reductase Sdr
GOQ09_24580	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
GOQ09_24585	COG1022	Amp-dependent synthetase and ligase
GOQ09_24590	COG0411	ABC transporter
GOQ09_24615	COG0318	PFAM AMP-dependent synthetase and ligase
GOQ09_24625	COG0372	Belongs to the citrate synthase family
GOQ09_24635	COG0693	protein deglycase activity
GOQ09_24660	COG4993	Dehydrogenase
GOQ09_24665	COG1940	carbohydrate kinase activity
GOQ09_24670	COG1129	ABC transporter
GOQ09_24675	COG4214	carbohydrate transport
GOQ09_24680	COG4213	ABC transporter substrate-binding protein
GOQ09_24690	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
GOQ09_24695	COG0583	DNA-binding transcription factor activity
GOQ09_24700	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
GOQ09_24705	COG0022	dehydrogenase e1 component
GOQ09_24710	COG1028	Short-chain dehydrogenase reductase Sdr
GOQ09_24715	COG0583	DNA-binding transcription factor activity
GOQ09_24730	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
GOQ09_24745	COG1024	Enoyl-CoA hydratase
GOQ09_24750	COG1960	acyl-CoA dehydrogenase activity
GOQ09_24770	COG0203	ribosomal protein L17
GOQ09_24775	COG0202	RNA polymerase activity
GOQ09_24780	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
GOQ09_24785	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
GOQ09_24790	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
GOQ09_24795	COG0257	Belongs to the bacterial ribosomal protein bL36 family
GOQ09_24800	COG0201	protein transport
GOQ09_24805	COG0200	Binds to the 23S rRNA
GOQ09_24810	COG1841	ribosomal large subunit assembly
GOQ09_24815	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
GOQ09_24820	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
GOQ09_24825	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
GOQ09_24830	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
GOQ09_24835	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
GOQ09_24840	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
GOQ09_24845	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
GOQ09_24850	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
GOQ09_24865	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
GOQ09_24870	COG0783	Belongs to the Dps family
GOQ09_24895	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
GOQ09_24900	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
GOQ09_24905	COG3386	PFAM SMP-30 Gluconolaconase
GOQ09_24910	COG0343	queuine tRNA-ribosyltransferase activity
GOQ09_24965	COG0284	orotidine-5'-phosphate decarboxylase activity
GOQ09_24980	COG1214	PFAM Peptidase M22, glycoprotease
GOQ09_24995	COG0494	nUDIX hydrolase
GOQ09_25000	COG2027	D-alanyl-D-alanine carboxypeptidase
GOQ09_25010	COG0009	L-threonylcarbamoyladenylate synthase
GOQ09_25015	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
GOQ09_25020	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
GOQ09_25030	COG3620	sequence-specific DNA binding
GOQ09_25035	COG3550	peptidyl-serine autophosphorylation
GOQ09_25045	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
GOQ09_25055	COG1522	sequence-specific DNA binding
GOQ09_25060	COG2515	1-aminocyclopropane-1-carboxylate deaminase
GOQ09_25080	COG0469	pyruvate kinase activity
GOQ09_25085	COG0126	phosphoglycerate kinase activity
GOQ09_25090	COG0583	DNA-binding transcription factor activity
GOQ09_25105	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
GOQ09_25135	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
GOQ09_25145	COG0242	peptide deformylase activity
GOQ09_25155	COG0758	DNA mediated transformation
GOQ09_25160	COG2922	Belongs to the Smg family
GOQ09_25170	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
GOQ09_25175	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
GOQ09_25190	COG1522	sequence-specific DNA binding
GOQ09_25200	COG0765	amino acid transport
GOQ09_25205	COG2814	Major facilitator Superfamily
GOQ09_25220	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
GOQ09_25250	COG0251	oxidation-reduction process
GOQ09_25260	COG3622	Belongs to the hyi family
GOQ09_25265	COG0235	Class ii aldolase
GOQ09_25270	COG3395	kinase activity
GOQ09_25275	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
GOQ09_25280	COG2084	Dehydrogenase
GOQ09_25285	COG2271	Major facilitator Superfamily
GOQ09_25290	COG2186	Transcriptional regulator
GOQ09_25295	COG3210	domain, Protein
GOQ09_25305	COG2831	hemolysin activation secretion protein
GOQ09_25320	COG1522	sequence-specific DNA binding
GOQ09_25345	COG4566	intracellular signal transduction
GOQ09_25355	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
GOQ09_25365	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
GOQ09_25370	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
GOQ09_25375	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
GOQ09_25380	COG1595	DNA-templated transcription, initiation
GOQ09_25395	COG0625	glutathione transferase activity
GOQ09_25410	COG4772	TonB-dependent receptor
GOQ09_25415	COG4681	YaeQ
GOQ09_25430	COG0861	Integral membrane protein TerC family
GOQ09_25440	COG1950	PFAM Membrane protein of
GOQ09_25445	COG4783	chaperone-mediated protein folding
GOQ09_25450	COG0315	cyclic pyranopterin monophosphate synthase activity
GOQ09_25515	COG1716	ATPase activity
GOQ09_25520	COG0631	protein serine/threonine phosphatase activity
GOQ09_25525	COG0861	Integral membrane protein TerC family
GOQ09_25530	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
GOQ09_25535	COG0045	succinate-CoA ligase (ADP-forming) activity
GOQ09_25540	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
GOQ09_25550	COG2137	regulation of response to DNA damage stimulus
GOQ09_25555	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
GOQ09_25570	COG0642	Histidine kinase
GOQ09_25580	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
GOQ09_25580	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
GOQ09_25595	COG0583	DNA-binding transcription factor activity
GOQ09_25600	COG3181	Tripartite tricarboxylate transporter family receptor
GOQ09_25615	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
GOQ09_25630	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
GOQ09_25635	COG0513	Belongs to the DEAD box helicase family
GOQ09_25645	COG0697	spore germination
GOQ09_25655	COG1802	Transcriptional regulator
GOQ09_25685	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
GOQ09_25690	COG3550	peptidyl-serine autophosphorylation
GOQ09_25705	COG1473	amidohydrolase
GOQ09_25710	COG1741	Belongs to the pirin family
GOQ09_25735	COG1047	Peptidyl-prolyl cis-trans
GOQ09_25775	COG1914	H( )-stimulated, divalent metal cation uptake system
GOQ09_25780	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
GOQ09_25795	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
GOQ09_25805	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
GOQ09_25810	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
GOQ09_25815	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
GOQ09_25820	COG0006	proline dipeptidase activity
GOQ09_25825	COG0583	DNA-binding transcription factor activity
GOQ09_25860	COG4262	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
GOQ09_25880	COG0280	phosphate acetyltransferase
GOQ09_25880	COG0281	malic enzyme
GOQ09_25895	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
GOQ09_25900	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
GOQ09_25905	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
GOQ09_25915	COG1385	rRNA (uridine-N3-)-methyltransferase activity
GOQ09_25930	COG2814	Major facilitator Superfamily
GOQ09_25935	COG2267	carboxylic ester hydrolase activity
GOQ09_25955	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
GOQ09_25960	COG1739	Uncharacterized protein family UPF0029
GOQ09_25965	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
GOQ09_25970	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
GOQ09_25975	COG2119	membrane
GOQ09_25980	COG0724	RNA recognition motif
GOQ09_25985	COG4221	oxidoreductase activity
GOQ09_25995	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
GOQ09_26020	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
GOQ09_26025	COG0706	membrane insertase activity
GOQ09_26030	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
GOQ09_26035	COG0594	ribonuclease P activity
GOQ09_26040	COG0230	Belongs to the bacterial ribosomal protein bL34 family