Varpa_0001 SM00382 ATPases associated with a variety of cellular activities Varpa_0001 SM00760 Bacterial dnaA protein helix-turn-helix domain Varpa_0002 SM00480 DNA polymerase III beta subunit Varpa_0003 SM00387 Histidine kinase-like ATPases Varpa_0003 SM00433 TopoisomeraseII Varpa_0012 SM00155 Phospholipase D. Active site motifs. Varpa_0023 SM00327 von Willebrand factor (vWF) type A domain Varpa_0023 SM00609 Vault protein Inter-alpha-Trypsin domain Varpa_0028 SM00387 Histidine kinase-like ATPases Varpa_0028 SM00388 His Kinase A (phosphoacceptor) domain Varpa_0029 SM00448 cheY-homologous receiver domain Varpa_0029 SM00862 Transcriptional regulatory protein, C terminal Varpa_0031 SM00422 helix_turn_helix, mercury resistance Varpa_0036 SM00825 Beta-ketoacyl synthase Varpa_0039 SM00448 cheY-homologous receiver domain Varpa_0039 SM00862 Transcriptional regulatory protein, C terminal Varpa_0040 SM00387 Histidine kinase-like ATPases Varpa_0040 SM00388 His Kinase A (phosphoacceptor) domain Varpa_0049 SM00460 Transglutaminase/protease-like homologues Varpa_0050 SM01228 Varpa_0050 Varpa_0055 SM00470 ParB-like nuclease domain Varpa_0070 SM00671 Sel1-like repeats. Varpa_0072 SM00450 Rhodanese Homology Domain Varpa_0079 SM00382 ATPases associated with a variety of cellular activities Varpa_0084 SM00345 helix_turn_helix gluconate operon transcriptional repressor Varpa_0092 SM00100 Cyclic nucleotide-monophosphate binding domain Varpa_0096 SM00382 ATPases associated with a variety of cellular activities Varpa_0097 SM00382 ATPases associated with a variety of cellular activities Varpa_0105 SM00530 Helix-turn-helix XRE-family like proteins Varpa_0106 SM00965 Secretin and TonB N terminus short domain Varpa_0119 SM00382 ATPases associated with a variety of cellular activities Varpa_0124 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain Varpa_0128 SM00342 helix_turn_helix, arabinose operon control protein Varpa_0128 SM00871 Bacterial transcription activator, effector binding domain Varpa_0137 SM00986 Uracil DNA glycosylase superfamily Varpa_0137 SM00987 UreE urease accessory protein, C-terminal domain Varpa_0149 SM00530 Helix-turn-helix XRE-family like proteins Varpa_0151 SM00903 Flavin reductase like domain Varpa_0153 SM00849 Metallo-beta-lactamase superfamily Varpa_0155 SM00155 Phospholipase D. Active site motifs. Varpa_0158 SM00382 ATPases associated with a variety of cellular activities Varpa_0159 SM00382 ATPases associated with a variety of cellular activities Varpa_0164 SM01230 Varpa_0164 Varpa_0166 SM00345 helix_turn_helix gluconate operon transcriptional repressor Varpa_0166 SM00895 Varpa_0166 Varpa_0175 SM00382 ATPases associated with a variety of cellular activities Varpa_0178 SM00341 Helicase and RNase D C-terminal Varpa_0178 SM00487 DEAD-like helicases superfamily Varpa_0178 SM00490 helicase superfamily c-terminal domain Varpa_0178 SM00956 Varpa_0178 Varpa_0181 SM00382 ATPases associated with a variety of cellular activities Varpa_0182 SM00345 helix_turn_helix gluconate operon transcriptional repressor Varpa_0182 SM00866 Varpa_0182 Varpa_0185 SM00346 helix_turn_helix isocitrate lyase regulation Varpa_0186 SM00062 Bacterial periplasmic substrate-binding proteins Varpa_0186 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. Varpa_0200 SM01018 B12 binding domain Varpa_0213 SM00382 ATPases associated with a variety of cellular activities Varpa_0214 SM00382 ATPases associated with a variety of cellular activities Varpa_0218 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Varpa_0220 SM00382 ATPases associated with a variety of cellular activities Varpa_0222 SM00938 Nitrogen regulatory protein P-II Varpa_0233 SM01005 Alanine racemase, C-terminal domain Varpa_0238 SM01007 Class II Aldolase and Adducin N-terminal domain Varpa_0251 SM00347 helix_turn_helix multiple antibiotic resistance protein Varpa_0252 SM00382 ATPases associated with a variety of cellular activities Varpa_0264 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Varpa_0264 SM00387 Histidine kinase-like ATPases Varpa_0264 SM00388 His Kinase A (phosphoacceptor) domain Varpa_0265 SM00448 cheY-homologous receiver domain Varpa_0265 SM00862 Transcriptional regulatory protein, C terminal Varpa_0268 SM00825 Beta-ketoacyl synthase Varpa_0274 SM00382 ATPases associated with a variety of cellular activities Varpa_0281 SM00382 ATPases associated with a variety of cellular activities Varpa_0283 SM00345 helix_turn_helix gluconate operon transcriptional repressor Varpa_0283 SM00895 Varpa_0283 Varpa_0290 SM00845 GatB domain Varpa_0302 SM00849 Metallo-beta-lactamase superfamily Varpa_0303 SM00346 helix_turn_helix isocitrate lyase regulation Varpa_0309 SM00382 ATPases associated with a variety of cellular activities Varpa_0321 SM00382 ATPases associated with a variety of cellular activities Varpa_0322 SM00346 helix_turn_helix isocitrate lyase regulation Varpa_0325 SM00062 Bacterial periplasmic substrate-binding proteins Varpa_0336 SM00878 Biotin carboxylase C-terminal domain Varpa_0337 SM00822 Varpa_0337 Varpa_0340 SM00886 Stress responsive A/B Barrel Domain Varpa_0341 SM00487 DEAD-like helicases superfamily Varpa_0341 SM00490 helicase superfamily c-terminal domain Varpa_0344 SM00360 RNA recognition motif Varpa_0350 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Varpa_0355 SM00829 Enoylreductase Varpa_0357 SM00382 ATPases associated with a variety of cellular activities Varpa_0359 SM00342 helix_turn_helix, arabinose operon control protein Varpa_0381 SM00382 ATPases associated with a variety of cellular activities Varpa_0382 SM00382 ATPases associated with a variety of cellular activities Varpa_0387 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins Varpa_0387 SM00458 Ricin-type beta-trefoil Varpa_0388 SM01133 Varpa_0388 Varpa_0391 SM00382 ATPases associated with a variety of cellular activities Varpa_0395 SM00345 helix_turn_helix gluconate operon transcriptional repressor Varpa_0395 SM00866 Varpa_0395 Varpa_0399 SM00387 Histidine kinase-like ATPases Varpa_0403 SM00382 ATPases associated with a variety of cellular activities Varpa_0416 SM00448 cheY-homologous receiver domain Varpa_0416 SM00862 Transcriptional regulatory protein, C terminal Varpa_0417 SM01002 Alanine dehydrogenase/PNT, C-terminal domain Varpa_0417 SM01003 Alanine dehydrogenase/PNT, N-terminal domain Varpa_0423 SM00382 ATPases associated with a variety of cellular activities Varpa_0424 SM00382 ATPases associated with a variety of cellular activities Varpa_0427 SM00612 Varpa_0427 Varpa_0441 SM00642 Alpha-amylase domain Varpa_0443 SM00642 Alpha-amylase domain Varpa_0444 SM00642 Alpha-amylase domain Varpa_0466 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. Varpa_0473 SM00346 helix_turn_helix isocitrate lyase regulation Varpa_0479 SM00836 DALR anticodon binding domain Varpa_0479 SM01016 Arginyl tRNA synthetase N terminal dom Varpa_0483 SM00382 ATPases associated with a variety of cellular activities Varpa_0485 SM00155 Phospholipase D. Active site motifs. Varpa_0487 SM00867 YceI-like domain Varpa_0488 SM00867 YceI-like domain Varpa_0490 SM00387 Histidine kinase-like ATPases Varpa_0490 SM00388 His Kinase A (phosphoacceptor) domain Varpa_0490 SM00448 cheY-homologous receiver domain Varpa_0491 SM00981 Varpa_0491 Varpa_0494 SM00342 helix_turn_helix, arabinose operon control protein Varpa_0500 SM00858 Varpa_0500 Varpa_0502 SM00240 Forkhead associated domain Varpa_0531 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen Varpa_0533 SM00460 Transglutaminase/protease-like homologues Varpa_0535 SM01060 Varpa_0535 Varpa_0536 SM00671 Sel1-like repeats. Varpa_0537 SM00155 Phospholipase D. Active site motifs. Varpa_0541 SM00912 haemagglutination activity domain Varpa_0545 SM00342 helix_turn_helix, arabinose operon control protein Varpa_0546 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Varpa_0546 SM00387 Histidine kinase-like ATPases Varpa_0546 SM00388 His Kinase A (phosphoacceptor) domain Varpa_0546 SM00448 cheY-homologous receiver domain Varpa_0548 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Varpa_0548 SM00387 Histidine kinase-like ATPases Varpa_0548 SM00388 His Kinase A (phosphoacceptor) domain Varpa_0548 SM00448 cheY-homologous receiver domain Varpa_0556 SM00219 Tyrosine kinase, catalytic domain Varpa_0557 SM00925 MltA specific insert domain Varpa_0566 SM00028 Tetratricopeptide repeats Varpa_0567 SM00382 ATPases associated with a variety of cellular activities Varpa_0567 SM01086 C-terminal, D2-small domain, of ClpB protein Varpa_0581 SM00240 Forkhead associated domain Varpa_0582 SM00331 Sigma factor PP2C-like phosphatases Varpa_0582 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain Varpa_0591 SM00421 helix_turn_helix, Lux Regulon Varpa_0591 SM00448 cheY-homologous receiver domain Varpa_0596 SM00729 Elongator protein 3, MiaB family, Radical SAM Varpa_0599 SM00345 helix_turn_helix gluconate operon transcriptional repressor Varpa_0602 SM00448 cheY-homologous receiver domain Varpa_0602 SM00862 Transcriptional regulatory protein, C terminal Varpa_0603 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Varpa_0603 SM00387 Histidine kinase-like ATPases Varpa_0603 SM00388 His Kinase A (phosphoacceptor) domain Varpa_0604 SM00344 helix_turn_helix ASNC type Varpa_0613 SM00382 ATPases associated with a variety of cellular activities Varpa_0614 SM01329 Varpa_0614 Varpa_0625 SM00344 helix_turn_helix ASNC type Varpa_0635 SM00986 Uracil DNA glycosylase superfamily Varpa_0635 SM00987 UreE urease accessory protein, C-terminal domain Varpa_0638 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. Varpa_0638 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. Varpa_0639 SM00649 Ribosomal protein L11/L12 Varpa_0644 SM00663 RNA polymerase I subunit A N-terminus Varpa_0648 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Varpa_0648 SM00387 Histidine kinase-like ATPases Varpa_0648 SM00388 His Kinase A (phosphoacceptor) domain Varpa_0649 SM00448 cheY-homologous receiver domain Varpa_0662 SM00729 Elongator protein 3, MiaB family, Radical SAM Varpa_0679 SM00091 PAS domain Varpa_0679 SM00138 Methyltransferase, chemotaxis proteins Varpa_0679 SM00387 Histidine kinase-like ATPases Varpa_0679 SM00388 His Kinase A (phosphoacceptor) domain Varpa_0679 SM00448 cheY-homologous receiver domain Varpa_0690 SM00986 Uracil DNA glycosylase superfamily Varpa_0690 SM00987 UreE urease accessory protein, C-terminal domain Varpa_0693 SM00822 Varpa_0693 Varpa_0695 SM00345 helix_turn_helix gluconate operon transcriptional repressor Varpa_0695 SM00895 Varpa_0695 Varpa_0700 SM00796 Allophanate hydrolase subunit 1 Varpa_0700 SM00797 Allophanate hydrolase subunit 2 Varpa_0701 SM00878 Biotin carboxylase C-terminal domain Varpa_0704 SM00346 helix_turn_helix isocitrate lyase regulation Varpa_0707 SM00564 beta-propeller repeat Varpa_0719 SM00346 helix_turn_helix isocitrate lyase regulation Varpa_0722 SM00342 helix_turn_helix, arabinose operon control protein Varpa_0726 SM00448 cheY-homologous receiver domain Varpa_0726 SM00862 Transcriptional regulatory protein, C terminal Varpa_0728 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Varpa_0728 SM00387 Histidine kinase-like ATPases Varpa_0728 SM00388 His Kinase A (phosphoacceptor) domain Varpa_0730 SM00421 helix_turn_helix, Lux Regulon Varpa_0734 SM00822 Varpa_0734 Varpa_0735 SM00387 Histidine kinase-like ATPases Varpa_0735 SM00388 His Kinase A (phosphoacceptor) domain Varpa_0736 SM00382 ATPases associated with a variety of cellular activities Varpa_0736 SM00448 cheY-homologous receiver domain Varpa_0745 SM00487 DEAD-like helicases superfamily Varpa_0745 SM00490 helicase superfamily c-terminal domain Varpa_0750 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain Varpa_0754 SM00829 Enoylreductase Varpa_0756 SM00822 Varpa_0756 Varpa_0767 SM00345 helix_turn_helix gluconate operon transcriptional repressor Varpa_0769 SM00897 FIST N domain Varpa_0769 SM01204 Varpa_0769 Varpa_0791 SM00382 ATPases associated with a variety of cellular activities Varpa_0804 SM00382 ATPases associated with a variety of cellular activities Varpa_0806 SM00858 Varpa_0806 Varpa_0810 SM00345 helix_turn_helix gluconate operon transcriptional repressor Varpa_0810 SM00895 Varpa_0810 Varpa_0814 SM00342 helix_turn_helix, arabinose operon control protein Varpa_0815 SM00345 helix_turn_helix gluconate operon transcriptional repressor Varpa_0815 SM00866 Varpa_0815 Varpa_0819 SM00382 ATPases associated with a variety of cellular activities Varpa_0820 SM00382 ATPases associated with a variety of cellular activities Varpa_0830 SM00822 Varpa_0830 Varpa_0831 SM00965 Secretin and TonB N terminus short domain Varpa_0847 SM00382 ATPases associated with a variety of cellular activities Varpa_0852 SM00062 Bacterial periplasmic substrate-binding proteins Varpa_0855 SM00382 ATPases associated with a variety of cellular activities Varpa_0870 SM00893 Electron transfer flavoprotein domain Varpa_0871 SM00893 Electron transfer flavoprotein domain Varpa_0885 SM00729 Elongator protein 3, MiaB family, Radical SAM Varpa_0886 SM00986 Uracil DNA glycosylase superfamily Varpa_0886 SM00987 UreE urease accessory protein, C-terminal domain Varpa_0890 SM00382 ATPases associated with a variety of cellular activities Varpa_0891 SM00382 ATPases associated with a variety of cellular activities Varpa_0901 SM00945 ProQ/FINO family Varpa_0902 SM00903 Flavin reductase like domain Varpa_0907 SM00342 helix_turn_helix, arabinose operon control protein Varpa_0908 SM00347 helix_turn_helix multiple antibiotic resistance protein Varpa_0915 SM00363 S4 RNA-binding domain Varpa_0916 SM00849 Metallo-beta-lactamase superfamily Varpa_0932 SM00342 helix_turn_helix, arabinose operon control protein Varpa_0935 SM00342 helix_turn_helix, arabinose operon control protein Varpa_0939 SM00342 helix_turn_helix, arabinose operon control protein Varpa_0947 SM01351 Varpa_0947 Varpa_0964 SM00833 Cobalamin synthesis protein cobW C-terminal domain Varpa_0969 SM00382 ATPases associated with a variety of cellular activities Varpa_0969 SM01086 C-terminal, D2-small domain, of ClpB protein Varpa_0983 SM00842 Cell division protein FtsA Varpa_0984 SM00864 Tubulin/FtsZ family, GTPase domain Varpa_0984 SM00865 Tubulin/FtsZ family, C-terminal domain Varpa_0989 SM00563 Phosphate acyltransferases Varpa_0994 SM00955 Varpa_0994 Varpa_0996 SM00421 helix_turn_helix, Lux Regulon Varpa_0996 SM00448 cheY-homologous receiver domain Varpa_1007 SM00878 Biotin carboxylase C-terminal domain Varpa_1014 SM00644 Varpa_1014 Varpa_1015 SM00382 ATPases associated with a variety of cellular activities Varpa_1015 SM00448 cheY-homologous receiver domain Varpa_1016 SM00387 Histidine kinase-like ATPases Varpa_1016 SM00388 His Kinase A (phosphoacceptor) domain Varpa_1019 SM00382 ATPases associated with a variety of cellular activities Varpa_1019 SM00962 SRP54-type protein, GTPase domain Varpa_1019 SM00963 SRP54-type protein, helical bundle domain Varpa_1021 SM00382 ATPases associated with a variety of cellular activities Varpa_1021 SM00448 cheY-homologous receiver domain Varpa_1023 SM00387 Histidine kinase-like ATPases Varpa_1023 SM00388 His Kinase A (phosphoacceptor) domain Varpa_1024 SM00729 Elongator protein 3, MiaB family, Radical SAM Varpa_1031 SM00100 Cyclic nucleotide-monophosphate binding domain Varpa_1031 SM00419 helix_turn_helix, cAMP Regulatory protein Varpa_1032 SM00855 Phosphoglycerate mutase family Varpa_1036 SM00905 Dihydroneopterin aldolase Varpa_1041 SM00382 ATPases associated with a variety of cellular activities Varpa_1047 SM00028 Tetratricopeptide repeats Varpa_1049 SM00345 helix_turn_helix gluconate operon transcriptional repressor Varpa_1054 SM00387 Histidine kinase-like ATPases Varpa_1054 SM00388 His Kinase A (phosphoacceptor) domain Varpa_1054 SM00448 cheY-homologous receiver domain Varpa_1063 SM01034 Sensors of blue-light using FAD Varpa_1064 SM00419 helix_turn_helix, cAMP Regulatory protein Varpa_1067 SM00344 helix_turn_helix ASNC type Varpa_1074 SM00382 ATPases associated with a variety of cellular activities Varpa_1075 SM00344 helix_turn_helix ASNC type Varpa_1076 SM00347 helix_turn_helix multiple antibiotic resistance protein Varpa_1079 SM00382 ATPases associated with a variety of cellular activities Varpa_1085 SM01133 Varpa_1085 Varpa_1086 SM00420 helix_turn_helix, Deoxyribose operon repressor Varpa_1086 SM01134 Varpa_1086 Varpa_1087 SM00344 helix_turn_helix ASNC type Varpa_1091 SM00226 Low molecular weight phosphatase family Varpa_1102 SM00530 Helix-turn-helix XRE-family like proteins Varpa_1106 SM00854 Bacterial capsule synthesis protein PGA_cap Varpa_1115 SM00382 ATPases associated with a variety of cellular activities Varpa_1117 SM00382 ATPases associated with a variety of cellular activities Varpa_1121 SM01130 Varpa_1121 Varpa_1123 SM00822 Varpa_1123 Varpa_1129 SM00382 ATPases associated with a variety of cellular activities Varpa_1134 SM00382 ATPases associated with a variety of cellular activities Varpa_1138 SM00382 ATPases associated with a variety of cellular activities Varpa_1141 SM00345 helix_turn_helix gluconate operon transcriptional repressor Varpa_1155 SM00382 ATPases associated with a variety of cellular activities Varpa_1176 SM00382 ATPases associated with a variety of cellular activities Varpa_1177 SM00382 ATPases associated with a variety of cellular activities Varpa_1183 SM00382 ATPases associated with a variety of cellular activities Varpa_1194 SM00382 ATPases associated with a variety of cellular activities Varpa_1196 SM00822 Varpa_1196 Varpa_1199 SM00342 helix_turn_helix, arabinose operon control protein Varpa_1202 SM00883 Chaperonin 10 Kd subunit Varpa_1207 SM00155 Phospholipase D. Active site motifs. Varpa_1224 SM01219 Varpa_1224 Varpa_1226 SM00842 Cell division protein FtsA Varpa_1230 SM00965 Secretin and TonB N terminus short domain Varpa_1233 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Varpa_1237 SM01321 Varpa_1237 Varpa_1240 SM00382 ATPases associated with a variety of cellular activities Varpa_1246 SM00382 ATPases associated with a variety of cellular activities Varpa_1260 SM00062 Bacterial periplasmic substrate-binding proteins Varpa_1271 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Varpa_1276 SM00028 Tetratricopeptide repeats Varpa_1278 SM00421 helix_turn_helix, Lux Regulon Varpa_1278 SM00448 cheY-homologous receiver domain Varpa_1284 SM00822 Varpa_1284 Varpa_1286 SM00421 helix_turn_helix, Lux Regulon Varpa_1286 SM00448 cheY-homologous receiver domain Varpa_1287 SM00387 Histidine kinase-like ATPases Varpa_1287 SM00388 His Kinase A (phosphoacceptor) domain Varpa_1291 SM00382 ATPases associated with a variety of cellular activities Varpa_1299 SM00382 ATPases associated with a variety of cellular activities Varpa_1300 SM00382 ATPases associated with a variety of cellular activities Varpa_1301 SM01119 Varpa_1301 Varpa_1310 SM00062 Bacterial periplasmic substrate-binding proteins Varpa_1316 SM00903 Flavin reductase like domain Varpa_1318 SM00822 Varpa_1318 Varpa_1320 SM00382 ATPases associated with a variety of cellular activities Varpa_1321 SM00382 ATPases associated with a variety of cellular activities Varpa_1336 SM00327 von Willebrand factor (vWF) type A domain Varpa_1342 SM00986 Uracil DNA glycosylase superfamily Varpa_1342 SM00987 UreE urease accessory protein, C-terminal domain Varpa_1344 SM00382 ATPases associated with a variety of cellular activities Varpa_1358 SM00829 Enoylreductase Varpa_1359 SM00448 cheY-homologous receiver domain Varpa_1363 SM00382 ATPases associated with a variety of cellular activities Varpa_1367 SM00354 helix_turn _helix lactose operon repressor Varpa_1370 SM00904 Riboflavin kinase Varpa_1371 SM00507 HNH nucleases Varpa_1385 SM00100 Cyclic nucleotide-monophosphate binding domain Varpa_1385 SM00419 helix_turn_helix, cAMP Regulatory protein Varpa_1386 SM00382 ATPases associated with a variety of cellular activities Varpa_1386 SM00843 Varpa_1386 Varpa_1388 SM00382 ATPases associated with a variety of cellular activities Varpa_1391 SM00382 ATPases associated with a variety of cellular activities Varpa_1392 SM00382 ATPases associated with a variety of cellular activities Varpa_1403 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. Varpa_1406 SM00822 Varpa_1406 Varpa_1429 SM00345 helix_turn_helix gluconate operon transcriptional repressor Varpa_1429 SM00895 Varpa_1429 Varpa_1434 SM00382 ATPases associated with a variety of cellular activities Varpa_1437 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain Varpa_1447 SM01116 Varpa_1447 Varpa_1448 SM00822 Varpa_1448 Varpa_1458 SM00382 ATPases associated with a variety of cellular activities Varpa_1460 SM00345 helix_turn_helix gluconate operon transcriptional repressor Varpa_1460 SM00895 Varpa_1460 Varpa_1482 SM01359 Varpa_1482 Varpa_1482 SM01360 Varpa_1482 Varpa_1503 SM00448 cheY-homologous receiver domain Varpa_1503 SM00850 LytTr DNA-binding domain Varpa_1519 SM00316 Ribosomal protein S1-like RNA-binding domain Varpa_1520 SM00363 S4 RNA-binding domain Varpa_1531 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. Varpa_1532 SM00822 Varpa_1532 Varpa_1533 SM00823 Phosphopantetheine attachment site Varpa_1534 SM00825 Beta-ketoacyl synthase Varpa_1539 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Varpa_1540 SM00838 Elongation factor G C-terminus Varpa_1543 SM00358 Double-stranded RNA binding motif Varpa_1543 SM00535 Ribonuclease III family Varpa_1556 SM00464 Found in ATP-dependent protease La (LON) Varpa_1564 SM00859 Semialdehyde dehydrogenase, NAD binding domain Varpa_1565 SM01329 Varpa_1565 Varpa_1575 SM00345 helix_turn_helix gluconate operon transcriptional repressor Varpa_1575 SM00866 Varpa_1575 Varpa_1591 SM00530 Helix-turn-helix XRE-family like proteins Varpa_1595 SM00899 Varpa_1595 Varpa_1617 SM00342 helix_turn_helix, arabinose operon control protein Varpa_1639 SM00479 Varpa_1639 Varpa_1640 SM00487 DEAD-like helicases superfamily Varpa_1640 SM00490 helicase superfamily c-terminal domain Varpa_1644 SM00829 Enoylreductase Varpa_1645 SM00347 helix_turn_helix multiple antibiotic resistance protein Varpa_1662 SM00382 ATPases associated with a variety of cellular activities Varpa_1663 SM00382 ATPases associated with a variety of cellular activities Varpa_1665 SM00822 Varpa_1665 Varpa_1666 SM00347 helix_turn_helix multiple antibiotic resistance protein Varpa_1670 SM00507 HNH nucleases Varpa_1675 SM01240 Varpa_1675 Varpa_1682 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs Varpa_1682 SM00474 3'-5' exonuclease Varpa_1682 SM00475 5'-3' exonuclease Varpa_1682 SM00482 DNA polymerase A domain Varpa_1686 SM00345 helix_turn_helix gluconate operon transcriptional repressor Varpa_1693 SM00062 Bacterial periplasmic substrate-binding proteins Varpa_1699 SM00382 ATPases associated with a variety of cellular activities Varpa_1700 SM00382 ATPases associated with a variety of cellular activities Varpa_1706 SM00530 Helix-turn-helix XRE-family like proteins Varpa_1710 SM00859 Semialdehyde dehydrogenase, NAD binding domain Varpa_1719 SM00382 ATPases associated with a variety of cellular activities Varpa_1721 SM00450 Rhodanese Homology Domain Varpa_1726 SM00861 Transketolase, pyrimidine binding domain Varpa_1734 SM00382 ATPases associated with a variety of cellular activities Varpa_1736 SM00345 helix_turn_helix gluconate operon transcriptional repressor Varpa_1736 SM00895 Varpa_1736 Varpa_1744 SM00345 helix_turn_helix gluconate operon transcriptional repressor Varpa_1744 SM00895 Varpa_1744 Varpa_1748 SM00382 ATPases associated with a variety of cellular activities Varpa_1749 SM00382 ATPases associated with a variety of cellular activities Varpa_1756 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Varpa_1757 SM01092 CO dehydrogenase flavoprotein C-terminal domain Varpa_1758 SM00382 ATPases associated with a variety of cellular activities Varpa_1772 SM00278 Helix-hairpin-helix DNA-binding motif class 1 Varpa_1775 SM00411 bacterial (prokaryotic) histone like domain Varpa_1776 SM00316 Ribosomal protein S1-like RNA-binding domain Varpa_1779 SM00830 Chorismate mutase type II Varpa_1782 SM00434 DNA Topoisomerase IV Varpa_1795 SM00852 Probable molybdopterin binding domain Varpa_1796 SM01230 Varpa_1796 Varpa_1798 SM00387 Histidine kinase-like ATPases Varpa_1798 SM00388 His Kinase A (phosphoacceptor) domain Varpa_1799 SM00382 ATPases associated with a variety of cellular activities Varpa_1799 SM00448 cheY-homologous receiver domain Varpa_1804 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain Varpa_1807 SM01130 Varpa_1807 Varpa_1827 SM00116 Domain in cystathionine beta-synthase and other proteins. Varpa_1841 SM00869 Autotransporter beta-domain Varpa_1850 SM00729 Elongator protein 3, MiaB family, Radical SAM Varpa_1852 SM00421 helix_turn_helix, Lux Regulon Varpa_1852 SM00448 cheY-homologous receiver domain Varpa_1853 SM00091 PAS domain Varpa_1853 SM00387 Histidine kinase-like ATPases Varpa_1853 SM00388 His Kinase A (phosphoacceptor) domain Varpa_1860 SM01350 Varpa_1860 Varpa_1861 SM00342 helix_turn_helix, arabinose operon control protein Varpa_1866 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Varpa_1868 SM00474 3'-5' exonuclease Varpa_1874 SM00829 Enoylreductase Varpa_1881 SM00763 PrkA AAA domain Varpa_1882 SM00271 DnaJ molecular chaperone homology domain Varpa_1892 SM00858 Varpa_1892 Varpa_1898 SM00345 helix_turn_helix gluconate operon transcriptional repressor Varpa_1898 SM00895 Varpa_1898 Varpa_1900 SM01130 Varpa_1900 Varpa_1903 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain Varpa_1911 SM00382 ATPases associated with a variety of cellular activities Varpa_1914 SM00155 Phospholipase D. Active site motifs. Varpa_1918 SM00345 helix_turn_helix gluconate operon transcriptional repressor Varpa_1918 SM00895 Varpa_1918 Varpa_1923 SM00382 ATPases associated with a variety of cellular activities Varpa_1924 SM00382 ATPases associated with a variety of cellular activities Varpa_1927 SM00849 Metallo-beta-lactamase superfamily Varpa_1933 SM00116 Domain in cystathionine beta-synthase and other proteins. Varpa_1937 SM00400 zinc finger Varpa_1937 SM00493 Varpa_1937 Varpa_1954 SM00841 Elongation factor P, C-terminal Varpa_1954 SM01185 Varpa_1954 Varpa_1958 SM00278 Helix-hairpin-helix DNA-binding motif class 1 Varpa_1958 SM00465 GIY-YIG type nucleases (URI domain) Varpa_1963 SM01329 Varpa_1963 Varpa_1964 SM00411 bacterial (prokaryotic) histone like domain Varpa_1966 SM00855 Phosphoglycerate mutase family Varpa_2004 SM00421 helix_turn_helix, Lux Regulon Varpa_2004 SM00448 cheY-homologous receiver domain Varpa_2006 SM00091 PAS domain Varpa_2006 SM00387 Histidine kinase-like ATPases Varpa_2006 SM00388 His Kinase A (phosphoacceptor) domain Varpa_2046 SM00528 Domain in histone-like proteins of HNS family Varpa_2047 SM00829 Enoylreductase Varpa_2050 SM00257 Lysin motif Varpa_2060 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. Varpa_2075 SM00382 ATPases associated with a variety of cellular activities Varpa_2083 SM00382 ATPases associated with a variety of cellular activities Varpa_2086 SM00871 Bacterial transcription activator, effector binding domain Varpa_2089 SM00670 Large family of predicted nucleotide-binding domains Varpa_2096 SM00852 Probable molybdopterin binding domain Varpa_2098 SM01130 Varpa_2098 Varpa_2101 SM00382 ATPases associated with a variety of cellular activities Varpa_2101 SM01086 C-terminal, D2-small domain, of ClpB protein Varpa_2104 SM00382 ATPases associated with a variety of cellular activities Varpa_2108 SM00382 ATPases associated with a variety of cellular activities Varpa_2113 SM00829 Enoylreductase Varpa_2114 SM00345 helix_turn_helix gluconate operon transcriptional repressor Varpa_2114 SM00895 Varpa_2114 Varpa_2117 SM00382 ATPases associated with a variety of cellular activities Varpa_2129 SM00825 Beta-ketoacyl synthase Varpa_2132 SM00342 helix_turn_helix, arabinose operon control protein Varpa_2140 SM00382 ATPases associated with a variety of cellular activities Varpa_2161 SM00822 Varpa_2161 Varpa_2162 SM00342 helix_turn_helix, arabinose operon control protein Varpa_2167 SM01192 Varpa_2167 Varpa_2167 SM01193 Varpa_2167 Varpa_2176 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. Varpa_2179 SM00849 Metallo-beta-lactamase superfamily Varpa_2181 SM01130 Varpa_2181 Varpa_2185 SM00387 Histidine kinase-like ATPases Varpa_2185 SM00433 TopoisomeraseII Varpa_2187 SM00434 DNA Topoisomerase IV Varpa_2197 SM00062 Bacterial periplasmic substrate-binding proteins Varpa_2198 SM00382 ATPases associated with a variety of cellular activities Varpa_2202 SM00354 helix_turn _helix lactose operon repressor Varpa_2204 SM01119 Varpa_2204 Varpa_2209 SM00460 Transglutaminase/protease-like homologues Varpa_2210 SM00062 Bacterial periplasmic substrate-binding proteins Varpa_2212 SM00460 Transglutaminase/protease-like homologues Varpa_2213 SM00849 Metallo-beta-lactamase superfamily Varpa_2220 SM00287 Bacterial SH3 domain homologues Varpa_2222 SM00420 helix_turn_helix, Deoxyribose operon repressor Varpa_2222 SM01134 Varpa_2222 Varpa_2224 SM00382 ATPases associated with a variety of cellular activities Varpa_2225 SM00382 ATPases associated with a variety of cellular activities Varpa_2234 SM00382 ATPases associated with a variety of cellular activities Varpa_2237 SM00825 Beta-ketoacyl synthase Varpa_2241 SM00460 Transglutaminase/protease-like homologues Varpa_2243 SM00382 ATPases associated with a variety of cellular activities Varpa_2246 SM00893 Electron transfer flavoprotein domain Varpa_2247 SM00893 Electron transfer flavoprotein domain Varpa_2251 SM00342 helix_turn_helix, arabinose operon control protein Varpa_2256 SM00822 Varpa_2256 Varpa_2261 SM00028 Tetratricopeptide repeats Varpa_2270 SM00382 ATPases associated with a variety of cellular activities Varpa_2274 SM00382 ATPases associated with a variety of cellular activities Varpa_2276 SM00354 helix_turn _helix lactose operon repressor Varpa_2277 SM00829 Enoylreductase Varpa_2279 SM00822 Varpa_2279 Varpa_2286 SM00387 Histidine kinase-like ATPases Varpa_2286 SM00388 His Kinase A (phosphoacceptor) domain Varpa_2287 SM00448 cheY-homologous receiver domain Varpa_2287 SM00862 Transcriptional regulatory protein, C terminal Varpa_2289 SM00387 Histidine kinase-like ATPases Varpa_2289 SM00388 His Kinase A (phosphoacceptor) domain Varpa_2290 SM00448 cheY-homologous receiver domain Varpa_2290 SM00862 Transcriptional regulatory protein, C terminal Varpa_2291 SM00869 Autotransporter beta-domain Varpa_2292 SM00346 helix_turn_helix isocitrate lyase regulation Varpa_2310 SM01144 Varpa_2310 Varpa_2312 SM00382 ATPases associated with a variety of cellular activities Varpa_2344 SM00387 Histidine kinase-like ATPases Varpa_2344 SM00388 His Kinase A (phosphoacceptor) domain Varpa_2345 SM00448 cheY-homologous receiver domain Varpa_2345 SM00862 Transcriptional regulatory protein, C terminal Varpa_2347 SM00014 Acid phosphatase homologues Varpa_2358 SM00530 Helix-turn-helix XRE-family like proteins Varpa_2363 SM00822 Varpa_2363 Varpa_2373 SM00382 ATPases associated with a variety of cellular activities Varpa_2379 SM00091 PAS domain Varpa_2379 SM00421 helix_turn_helix, Lux Regulon Varpa_2380 SM00882 Coenzyme A transferase Varpa_2381 SM00882 Coenzyme A transferase Varpa_2399 SM00530 Helix-turn-helix XRE-family like proteins Varpa_2406 SM00271 DnaJ molecular chaperone homology domain Varpa_2407 SM00855 Phosphoglycerate mutase family Varpa_2414 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Varpa_2418 SM00345 helix_turn_helix gluconate operon transcriptional repressor Varpa_2421 SM00506 Appr-1"-p processing enzyme Varpa_2424 SM00062 Bacterial periplasmic substrate-binding proteins Varpa_2432 SM00382 ATPases associated with a variety of cellular activities Varpa_2442 SM00481 DNA polymerase alpha chain like domain Varpa_2458 SM00116 Domain in cystathionine beta-synthase and other proteins. Varpa_2460 SM00829 Enoylreductase Varpa_2463 SM00347 helix_turn_helix multiple antibiotic resistance protein Varpa_2470 SM00331 Sigma factor PP2C-like phosphatases Varpa_2470 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain Varpa_2474 SM00567 E-Z type HEAT repeats Varpa_2475 SM00382 ATPases associated with a variety of cellular activities Varpa_2480 SM00345 helix_turn_helix gluconate operon transcriptional repressor Varpa_2480 SM00866 Varpa_2480 Varpa_2484 SM00100 Cyclic nucleotide-monophosphate binding domain Varpa_2487 SM00855 Phosphoglycerate mutase family Varpa_2492 SM00382 ATPases associated with a variety of cellular activities Varpa_2494 SM00448 cheY-homologous receiver domain Varpa_2494 SM00862 Transcriptional regulatory protein, C terminal Varpa_2495 SM00091 PAS domain Varpa_2495 SM00387 Histidine kinase-like ATPases Varpa_2495 SM00388 His Kinase A (phosphoacceptor) domain Varpa_2500 SM00357 Cold shock protein domain Varpa_2500 SM00382 ATPases associated with a variety of cellular activities Varpa_2500 SM00959 Rho termination factor, N-terminal domain Varpa_2505 SM00382 ATPases associated with a variety of cellular activities Varpa_2507 SM00493 Varpa_2507 Varpa_2510 SM00382 ATPases associated with a variety of cellular activities Varpa_2514 SM00849 Metallo-beta-lactamase superfamily Varpa_2517 SM00852 Probable molybdopterin binding domain Varpa_2519 SM00729 Elongator protein 3, MiaB family, Radical SAM Varpa_2526 SM00155 Phospholipase D. Active site motifs. Varpa_2536 SM00344 helix_turn_helix ASNC type Varpa_2544 SM00938 Nitrogen regulatory protein P-II Varpa_2556 SM00917 LeuA allosteric (dimerisation) domain Varpa_2557 SM00917 LeuA allosteric (dimerisation) domain Varpa_2559 SM00346 helix_turn_helix isocitrate lyase regulation Varpa_2562 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Varpa_2563 SM00342 helix_turn_helix, arabinose operon control protein Varpa_2567 SM00346 helix_turn_helix isocitrate lyase regulation Varpa_2568 SM00448 cheY-homologous receiver domain Varpa_2568 SM00862 Transcriptional regulatory protein, C terminal Varpa_2569 SM00387 Histidine kinase-like ATPases Varpa_2569 SM00388 His Kinase A (phosphoacceptor) domain Varpa_2570 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Varpa_2572 SM00387 Histidine kinase-like ATPases Varpa_2573 SM00421 helix_turn_helix, Lux Regulon Varpa_2573 SM00448 cheY-homologous receiver domain Varpa_2585 SM00829 Enoylreductase Varpa_2586 SM00342 helix_turn_helix, arabinose operon control protein Varpa_2594 SM00849 Metallo-beta-lactamase superfamily Varpa_2608 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain Varpa_2624 SM00382 ATPases associated with a variety of cellular activities Varpa_2639 SM00822 Varpa_2639 Varpa_2642 SM00833 Cobalamin synthesis protein cobW C-terminal domain Varpa_2644 SM00345 helix_turn_helix gluconate operon transcriptional repressor Varpa_2649 SM00382 ATPases associated with a variety of cellular activities Varpa_2653 SM01007 Class II Aldolase and Adducin N-terminal domain Varpa_2654 SM00420 helix_turn_helix, Deoxyribose operon repressor Varpa_2654 SM01134 Varpa_2654 Varpa_2659 SM00448 cheY-homologous receiver domain Varpa_2659 SM00862 Transcriptional regulatory protein, C terminal Varpa_2660 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Varpa_2660 SM00387 Histidine kinase-like ATPases Varpa_2660 SM00388 His Kinase A (phosphoacceptor) domain Varpa_2663 SM00460 Transglutaminase/protease-like homologues Varpa_2670 SM00062 Bacterial periplasmic substrate-binding proteins Varpa_2673 SM00062 Bacterial periplasmic substrate-binding proteins Varpa_2674 SM00382 ATPases associated with a variety of cellular activities Varpa_2681 SM00450 Rhodanese Homology Domain Varpa_2683 SM00530 Helix-turn-helix XRE-family like proteins Varpa_2698 SM00382 ATPases associated with a variety of cellular activities Varpa_2701 SM00382 ATPases associated with a variety of cellular activities Varpa_2704 SM00563 Phosphate acyltransferases Varpa_2708 SM01209 Varpa_2708 Varpa_2708 SM01210 Varpa_2708 Varpa_2715 SM00316 Ribosomal protein S1-like RNA-binding domain Varpa_2716 SM00382 ATPases associated with a variety of cellular activities Varpa_2756 SM00318 Staphylococcal nuclease homologues Varpa_2773 SM00487 DEAD-like helicases superfamily Varpa_2773 SM00490 helicase superfamily c-terminal domain Varpa_2779 SM00972 Spore Coat Protein U domain Varpa_2782 SM00972 Spore Coat Protein U domain Varpa_2783 SM00387 Histidine kinase-like ATPases Varpa_2783 SM00388 His Kinase A (phosphoacceptor) domain Varpa_2783 SM00448 cheY-homologous receiver domain Varpa_2784 SM00382 ATPases associated with a variety of cellular activities Varpa_2787 SM00849 Metallo-beta-lactamase superfamily Varpa_2795 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen Varpa_2798 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen Varpa_2799 SM00028 Tetratricopeptide repeats Varpa_2806 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. Varpa_2807 SM00530 Helix-turn-helix XRE-family like proteins Varpa_2810 SM00382 ATPases associated with a variety of cellular activities Varpa_2819 SM00382 ATPases associated with a variety of cellular activities Varpa_2820 SM00382 ATPases associated with a variety of cellular activities Varpa_2820 SM00487 DEAD-like helicases superfamily Varpa_2820 SM00490 helicase superfamily c-terminal domain Varpa_2820 SM00847 Helicase associated domain (HA2) Add an annotation Varpa_2835 SM00448 cheY-homologous receiver domain Varpa_2837 SM00244 prohibitin homologues Varpa_2845 SM00382 ATPases associated with a variety of cellular activities Varpa_2848 SM00316 Ribosomal protein S1-like RNA-binding domain Varpa_2848 SM00322 K homology RNA-binding domain Varpa_2863 SM00116 Domain in cystathionine beta-synthase and other proteins. Varpa_2863 SM01240 Varpa_2863 Varpa_2871 SM00387 Histidine kinase-like ATPases Varpa_2872 SM00421 helix_turn_helix, Lux Regulon Varpa_2872 SM00448 cheY-homologous receiver domain Varpa_2887 SM00823 Phosphopantetheine attachment site Varpa_2888 SM00823 Phosphopantetheine attachment site Varpa_2888 SM00825 Beta-ketoacyl synthase Varpa_2888 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. Varpa_2890 SM00382 ATPases associated with a variety of cellular activities Varpa_2890 SM00448 cheY-homologous receiver domain Varpa_2906 SM00382 ATPases associated with a variety of cellular activities Varpa_2906 SM01086 C-terminal, D2-small domain, of ClpB protein Varpa_2915 SM00331 Sigma factor PP2C-like phosphatases Varpa_2915 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain Varpa_2923 SM00219 Tyrosine kinase, catalytic domain Varpa_2935 SM00830 Chorismate mutase type II Varpa_2940 SM00387 Histidine kinase-like ATPases Varpa_2940 SM00388 His Kinase A (phosphoacceptor) domain Varpa_2941 SM00421 helix_turn_helix, Lux Regulon Varpa_2941 SM00448 cheY-homologous receiver domain Varpa_2943 SM00248 ankyrin repeats Varpa_2949 SM00240 Forkhead associated domain Varpa_2955 SM00448 cheY-homologous receiver domain Varpa_2956 SM00387 Histidine kinase-like ATPases Varpa_2956 SM00388 His Kinase A (phosphoacceptor) domain Varpa_2956 SM00448 cheY-homologous receiver domain Varpa_2958 SM00138 Methyltransferase, chemotaxis proteins Varpa_2959 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Varpa_2959 SM00387 Histidine kinase-like ATPases Varpa_2959 SM00388 His Kinase A (phosphoacceptor) domain Varpa_2959 SM00448 cheY-homologous receiver domain Varpa_2960 SM00488 Varpa_2960 Varpa_2960 SM00491 Varpa_2960 Varpa_2972 SM00342 helix_turn_helix, arabinose operon control protein Varpa_2982 SM00450 Rhodanese Homology Domain Varpa_2988 SM00881 CoA binding domain Varpa_2993 SM00155 Phospholipase D. Active site motifs. Varpa_2994 SM00421 helix_turn_helix, Lux Regulon Varpa_2994 SM00448 cheY-homologous receiver domain Varpa_3003 SM00642 Alpha-amylase domain Varpa_3004 SM00642 Alpha-amylase domain Varpa_3005 SM00642 Alpha-amylase domain Varpa_3007 SM00642 Alpha-amylase domain Varpa_3008 SM00642 Alpha-amylase domain Varpa_3009 SM00642 Alpha-amylase domain Varpa_3014 SM00448 cheY-homologous receiver domain Varpa_3015 SM00091 PAS domain Varpa_3015 SM00387 Histidine kinase-like ATPases Varpa_3015 SM00388 His Kinase A (phosphoacceptor) domain Varpa_3015 SM00448 cheY-homologous receiver domain Varpa_3018 SM00960 Roadblock/LC7 domain Varpa_3022 SM01060 Varpa_3022 Varpa_3025 SM00829 Enoylreductase Varpa_3039 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Varpa_3039 SM00091 PAS domain Varpa_3039 SM00387 Histidine kinase-like ATPases Varpa_3039 SM00388 His Kinase A (phosphoacceptor) domain Varpa_3039 SM00448 cheY-homologous receiver domain Varpa_3041 SM00382 ATPases associated with a variety of cellular activities Varpa_3049 SM00195 Dual specificity phosphatase, catalytic domain Varpa_3050 SM00984 UDP binding domain Varpa_3056 SM00829 Enoylreductase Varpa_3066 SM00388 His Kinase A (phosphoacceptor) domain Varpa_3067 SM00382 ATPases associated with a variety of cellular activities Varpa_3067 SM00448 cheY-homologous receiver domain Varpa_3068 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Varpa_3068 SM00091 PAS domain Varpa_3068 SM00138 Methyltransferase, chemotaxis proteins Varpa_3068 SM00387 Histidine kinase-like ATPases Varpa_3068 SM00388 His Kinase A (phosphoacceptor) domain Varpa_3068 SM00448 cheY-homologous receiver domain Varpa_3099 SM00248 ankyrin repeats Varpa_3114 SM00316 Ribosomal protein S1-like RNA-binding domain Varpa_3114 SM00732 Likely ribonuclease with RNase H fold. Varpa_3115 SM00387 Histidine kinase-like ATPases Varpa_3116 SM00421 helix_turn_helix, Lux Regulon Varpa_3116 SM00448 cheY-homologous receiver domain Varpa_3125 SM00965 Secretin and TonB N terminus short domain Varpa_3129 SM00354 helix_turn _helix lactose operon repressor Varpa_3131 SM00473 divergent subfamily of APPLE domains Varpa_3159 SM00345 helix_turn_helix gluconate operon transcriptional repressor Varpa_3159 SM00895 Varpa_3159 Varpa_3177 SM00829 Enoylreductase Varpa_3179 SM00822 Varpa_3179 Varpa_3180 SM00886 Stress responsive A/B Barrel Domain Varpa_3187 SM00382 ATPases associated with a variety of cellular activities Varpa_3188 SM00382 ATPases associated with a variety of cellular activities Varpa_3195 SM00342 helix_turn_helix, arabinose operon control protein Varpa_3201 SM01211 Varpa_3201 Varpa_3203 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Varpa_3204 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Varpa_3204 SM00267 diguanylate cyclase Varpa_3211 SM00028 Tetratricopeptide repeats Varpa_3212 SM00052 Putative diguanylate phosphodiesterase Varpa_3212 SM00267 diguanylate cyclase Varpa_3219 SM00062 Bacterial periplasmic substrate-binding proteins Varpa_3223 SM00278 Helix-hairpin-helix DNA-binding motif class 1 Varpa_3223 SM00292 breast cancer carboxy-terminal domain Varpa_3223 SM00532 Ligase N family Varpa_3224 SM00771 ZipA, C-terminal domain (FtsZ-binding) Varpa_3225 SM00968 SMC proteins Flexible Hinge Domain Varpa_3230 SM00822 Varpa_3230 Varpa_3251 SM00382 ATPases associated with a variety of cellular activities Varpa_3261 SM00479 Varpa_3261 Varpa_3262 SM00155 Phospholipase D. Active site motifs. Varpa_3263 SM00382 ATPases associated with a variety of cellular activities Varpa_3263 SM01086 C-terminal, D2-small domain, of ClpB protein Varpa_3277 SM00382 ATPases associated with a variety of cellular activities Varpa_3277 SM01086 C-terminal, D2-small domain, of ClpB protein Varpa_3278 SM01329 Varpa_3278 Varpa_3290 SM00870 Varpa_3290 Varpa_3297 SM00100 Cyclic nucleotide-monophosphate binding domain Varpa_3297 SM00419 helix_turn_helix, cAMP Regulatory protein Varpa_3303 SM00382 ATPases associated with a variety of cellular activities Varpa_3305 SM01103 Varpa_3305 Varpa_3310 SM00851 MGS-like domain Varpa_3310 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain Varpa_3311 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain Varpa_3318 SM00935 Outer membrane protein (OmpH-like) Varpa_3332 SM00822 Varpa_3332 Varpa_3333 SM00316 Ribosomal protein S1-like RNA-binding domain Varpa_3333 SM00357 Cold shock protein domain Varpa_3333 SM00955 Varpa_3333 Varpa_3334 SM00729 Elongator protein 3, MiaB family, Radical SAM Varpa_3336 SM00954 Region found in RelA / SpoT proteins Varpa_3340 SM00448 cheY-homologous receiver domain Varpa_3340 SM00862 Transcriptional regulatory protein, C terminal Varpa_3341 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Varpa_3341 SM00387 Histidine kinase-like ATPases Varpa_3341 SM00388 His Kinase A (phosphoacceptor) domain Varpa_3344 SM00487 DEAD-like helicases superfamily Varpa_3344 SM00490 helicase superfamily c-terminal domain Varpa_3344 SM00982 Varpa_3344 Varpa_3344 SM01058 CarD-like/TRCF domain Varpa_3350 SM00965 Secretin and TonB N terminus short domain Varpa_3352 SM00478 endonuclease III Varpa_3352 SM00525 Varpa_3352 Varpa_3354 SM00855 Phosphoglycerate mutase family Varpa_3374 SM00382 ATPases associated with a variety of cellular activities Varpa_3384 SM00342 helix_turn_helix, arabinose operon control protein Varpa_3395 SM00345 helix_turn_helix gluconate operon transcriptional repressor Varpa_3395 SM00895 Varpa_3395 Varpa_3411 SM00382 ATPases associated with a variety of cellular activities Varpa_3420 SM00382 ATPases associated with a variety of cellular activities Varpa_3420 SM00464 Found in ATP-dependent protease La (LON) Varpa_3421 SM00382 ATPases associated with a variety of cellular activities Varpa_3421 SM00994 ClpX C4-type zinc finger Varpa_3421 SM01086 C-terminal, D2-small domain, of ClpB protein Varpa_3441 SM00382 ATPases associated with a variety of cellular activities Varpa_3443 SM00382 ATPases associated with a variety of cellular activities Varpa_3447 SM00382 ATPases associated with a variety of cellular activities Varpa_3456 SM00448 cheY-homologous receiver domain Varpa_3456 SM00862 Transcriptional regulatory protein, C terminal Varpa_3457 SM00387 Histidine kinase-like ATPases Varpa_3457 SM00388 His Kinase A (phosphoacceptor) domain Varpa_3458 SM00363 S4 RNA-binding domain Varpa_3463 SM00387 Histidine kinase-like ATPases Varpa_3465 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Varpa_3466 SM00100 Cyclic nucleotide-monophosphate binding domain Varpa_3467 SM00347 helix_turn_helix multiple antibiotic resistance protein Varpa_3471 SM00382 ATPases associated with a variety of cellular activities Varpa_3475 SM00382 ATPases associated with a variety of cellular activities Varpa_3479 SM00382 ATPases associated with a variety of cellular activities Varpa_3485 SM00382 ATPases associated with a variety of cellular activities Varpa_3492 SM00382 ATPases associated with a variety of cellular activities Varpa_3504 SM00478 endonuclease III Varpa_3505 SM00840 Varpa_3505 Varpa_3506 SM00028 Tetratricopeptide repeats Varpa_3536 SM00481 DNA polymerase alpha chain like domain Varpa_3537 SM00450 Rhodanese Homology Domain Varpa_3538 SM00448 cheY-homologous receiver domain Varpa_3538 SM00862 Transcriptional regulatory protein, C terminal Varpa_3539 SM00387 Histidine kinase-like ATPases Varpa_3539 SM00388 His Kinase A (phosphoacceptor) domain Varpa_3553 SM00100 Cyclic nucleotide-monophosphate binding domain Varpa_3553 SM00419 helix_turn_helix, cAMP Regulatory protein Varpa_3555 SM01007 Class II Aldolase and Adducin N-terminal domain Varpa_3557 SM01217 Varpa_3557 Varpa_3560 SM00834 Putative regulatory protein Varpa_3562 SM00382 ATPases associated with a variety of cellular activities Varpa_3563 SM00382 ATPases associated with a variety of cellular activities Varpa_3567 SM00387 Histidine kinase-like ATPases Varpa_3567 SM00388 His Kinase A (phosphoacceptor) domain Varpa_3567 SM00448 cheY-homologous receiver domain Varpa_3568 SM00421 helix_turn_helix, Lux Regulon Varpa_3568 SM00448 cheY-homologous receiver domain Varpa_3573 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Varpa_3573 SM00387 Histidine kinase-like ATPases Varpa_3573 SM00388 His Kinase A (phosphoacceptor) domain Varpa_3573 SM00448 cheY-homologous receiver domain Varpa_3574 SM00448 cheY-homologous receiver domain Varpa_3575 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Varpa_3575 SM00387 Histidine kinase-like ATPases Varpa_3575 SM00388 His Kinase A (phosphoacceptor) domain Varpa_3577 SM00062 Bacterial periplasmic substrate-binding proteins Varpa_3592 SM00346 helix_turn_helix isocitrate lyase regulation Varpa_3595 SM00822 Varpa_3595 Varpa_3599 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain Varpa_3604 SM00382 ATPases associated with a variety of cellular activities Varpa_3605 SM00387 Histidine kinase-like ATPases Varpa_3605 SM00388 His Kinase A (phosphoacceptor) domain Varpa_3605 SM00448 cheY-homologous receiver domain Varpa_3611 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Varpa_3612 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Varpa_3618 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Varpa_3623 SM00852 Probable molybdopterin binding domain Varpa_3624 SM00852 Probable molybdopterin binding domain Varpa_3626 SM00382 ATPases associated with a variety of cellular activities Varpa_3627 SM00411 bacterial (prokaryotic) histone like domain Varpa_3631 SM00935 Outer membrane protein (OmpH-like) Varpa_3634 SM01034 Sensors of blue-light using FAD Varpa_3639 SM00342 helix_turn_helix, arabinose operon control protein Varpa_3650 SM01119 Varpa_3650 Varpa_3657 SM00344 helix_turn_helix ASNC type Varpa_3662 SM00357 Cold shock protein domain Varpa_3664 SM00729 Elongator protein 3, MiaB family, Radical SAM Varpa_3665 SM00347 helix_turn_helix multiple antibiotic resistance protein Varpa_3669 SM00754 A domain in the BMP inhibitor chordin and in microbial proteins. Varpa_3677 SM00530 Helix-turn-helix XRE-family like proteins Varpa_3680 SM00967 RNA 2'-O ribose methyltransferase substrate binding Varpa_3683 SM00382 ATPases associated with a variety of cellular activities Varpa_3689 SM00342 helix_turn_helix, arabinose operon control protein Varpa_3692 SM00788 Adenylosuccinate synthetase Varpa_3695 SM00244 prohibitin homologues Varpa_3696 SM00244 prohibitin homologues Varpa_3700 SM00564 beta-propeller repeat Varpa_3705 SM00028 Tetratricopeptide repeats Varpa_3707 SM00562 Varpa_3707 Varpa_3708 SM00363 S4 RNA-binding domain Varpa_3712 SM00491 Varpa_3712 Varpa_3714 SM00331 Sigma factor PP2C-like phosphatases Varpa_3714 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain Varpa_3719 SM00861 Transketolase, pyrimidine binding domain Varpa_3731 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Varpa_3731 SM00091 PAS domain Varpa_3731 SM00387 Histidine kinase-like ATPases Varpa_3731 SM00388 His Kinase A (phosphoacceptor) domain Varpa_3732 SM00421 helix_turn_helix, Lux Regulon Varpa_3732 SM00448 cheY-homologous receiver domain Varpa_3743 SM00479 Varpa_3743 Varpa_3751 SM00487 DEAD-like helicases superfamily Varpa_3751 SM00490 helicase superfamily c-terminal domain Varpa_3757 SM00344 helix_turn_helix ASNC type Varpa_3759 SM00729 Elongator protein 3, MiaB family, Radical SAM Varpa_3759 SM00876 Biotin and Thiamin Synthesis associated domain Varpa_3760 SM00878 Biotin carboxylase C-terminal domain Varpa_3766 SM00345 helix_turn_helix gluconate operon transcriptional repressor Varpa_3766 SM00895 Varpa_3766 Varpa_3767 SM00346 helix_turn_helix isocitrate lyase regulation Varpa_3769 SM00448 cheY-homologous receiver domain Varpa_3770 SM00448 cheY-homologous receiver domain Varpa_3774 SM00347 helix_turn_helix multiple antibiotic resistance protein Varpa_3776 SM00822 Varpa_3776 Varpa_3780 SM00344 helix_turn_helix ASNC type Varpa_3789 SM00421 helix_turn_helix, Lux Regulon Varpa_3796 SM01144 Varpa_3796 Varpa_3802 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Varpa_3802 SM00267 diguanylate cyclase Varpa_3803 SM00346 helix_turn_helix isocitrate lyase regulation Varpa_3807 SM00382 ATPases associated with a variety of cellular activities Varpa_3808 SM00382 ATPases associated with a variety of cellular activities Varpa_3826 SM00354 helix_turn _helix lactose operon repressor Varpa_3835 SM00345 helix_turn_helix gluconate operon transcriptional repressor Varpa_3838 SM00248 ankyrin repeats Varpa_3840 SM00090 RIO-like kinase Varpa_3843 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain Varpa_3843 SM00508 Cysteine-rich motif following a subset of SET domains Varpa_3846 SM00382 ATPases associated with a variety of cellular activities Varpa_3848 SM00833 Cobalamin synthesis protein cobW C-terminal domain Varpa_3856 SM00822 Varpa_3856 Varpa_3877 SM00155 Phospholipase D. Active site motifs. Varpa_3881 SM00382 ATPases associated with a variety of cellular activities Varpa_3882 SM00354 helix_turn _helix lactose operon repressor Varpa_3901 SM00346 helix_turn_helix isocitrate lyase regulation Varpa_3904 SM00881 CoA binding domain Varpa_3912 SM00860 SMI1 / KNR4 family Varpa_3926 SM00487 DEAD-like helicases superfamily Varpa_3926 SM00490 helicase superfamily c-terminal domain Varpa_3933 SM00912 haemagglutination activity domain Varpa_3941 SM00422 helix_turn_helix, mercury resistance Varpa_3942 SM00411 bacterial (prokaryotic) histone like domain Varpa_3943 SM00873 B3/4 domain Varpa_3943 SM00874 tRNA synthetase B5 domain Varpa_3943 SM00896 Ferredoxin-fold anticodon binding domain Varpa_3948 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain Varpa_3952 SM00151 SWI complex, BAF60b domains Varpa_3953 SM00342 helix_turn_helix, arabinose operon control protein Varpa_3960 SM00382 ATPases associated with a variety of cellular activities Varpa_3972 SM00646 Varpa_3972 Varpa_3976 SM00853 MutL C terminal dimerisation domain Varpa_3976 SM01340 Varpa_3976 Varpa_3978 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Varpa_3981 SM00342 helix_turn_helix, arabinose operon control protein Varpa_3983 SM00382 ATPases associated with a variety of cellular activities Varpa_3985 SM00345 helix_turn_helix gluconate operon transcriptional repressor Varpa_3985 SM00895 Varpa_3985 Varpa_3987 SM00858 Varpa_3987 Varpa_4001 SM00382 ATPases associated with a variety of cellular activities Varpa_4002 SM00382 ATPases associated with a variety of cellular activities Varpa_4007 SM00347 helix_turn_helix multiple antibiotic resistance protein Varpa_4008 SM00382 ATPases associated with a variety of cellular activities Varpa_4019 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Varpa_4020 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Varpa_4028 SM00829 Enoylreductase Varpa_4029 SM00316 Ribosomal protein S1-like RNA-binding domain Varpa_4029 SM00322 K homology RNA-binding domain Varpa_4030 SM01387 Varpa_4030 Varpa_4036 SM01012 Varpa_4036 Varpa_4039 SM00382 ATPases associated with a variety of cellular activities Varpa_4040 SM01012 Varpa_4040 Varpa_4042 SM00220 Serine/Threonine protein kinases, catalytic domain Varpa_4042 SM00331 Sigma factor PP2C-like phosphatases Varpa_4042 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain Varpa_4045 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Varpa_4050 SM00382 ATPases associated with a variety of cellular activities Varpa_4065 SM00822 Varpa_4065 Varpa_4066 SM00829 Enoylreductase Varpa_4067 SM00382 ATPases associated with a variety of cellular activities Varpa_4072 SM00342 helix_turn_helix, arabinose operon control protein Varpa_4075 SM00852 Probable molybdopterin binding domain Varpa_4082 SM00448 cheY-homologous receiver domain Varpa_4082 SM00862 Transcriptional regulatory protein, C terminal Varpa_4083 SM00387 Histidine kinase-like ATPases Varpa_4083 SM00388 His Kinase A (phosphoacceptor) domain Varpa_4085 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Varpa_4085 SM00387 Histidine kinase-like ATPases Varpa_4085 SM00388 His Kinase A (phosphoacceptor) domain Varpa_4085 SM00448 cheY-homologous receiver domain Varpa_4086 SM00448 cheY-homologous receiver domain Varpa_4087 SM00448 cheY-homologous receiver domain Varpa_4087 SM00862 Transcriptional regulatory protein, C terminal Varpa_4095 SM00422 helix_turn_helix, mercury resistance Varpa_4097 SM00829 Enoylreductase Varpa_4105 SM00342 helix_turn_helix, arabinose operon control protein Varpa_4108 SM00342 helix_turn_helix, arabinose operon control protein Varpa_4114 SM00347 helix_turn_helix multiple antibiotic resistance protein Varpa_4125 SM00382 ATPases associated with a variety of cellular activities Varpa_4134 SM00533 DNA-binding domain of DNA mismatch repair MUTS family Varpa_4134 SM00534 ATPase domain of DNA mismatch repair MUTS family Varpa_4141 SM00421 helix_turn_helix, Lux Regulon Varpa_4141 SM00448 cheY-homologous receiver domain Varpa_4143 SM00387 Histidine kinase-like ATPases Varpa_4147 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Varpa_4157 SM00387 Histidine kinase-like ATPases Varpa_4158 SM00448 cheY-homologous receiver domain Varpa_4158 SM00850 LytTr DNA-binding domain Varpa_4162 SM00470 ParB-like nuclease domain Varpa_4170 SM00849 Metallo-beta-lactamase superfamily Varpa_4172 SM00850 LytTr DNA-binding domain Varpa_4179 SM00382 ATPases associated with a variety of cellular activities Varpa_4185 SM00116 Domain in cystathionine beta-synthase and other proteins. Varpa_4187 SM00422 helix_turn_helix, mercury resistance Varpa_4189 SM00822 Varpa_4189 Varpa_4190 SM00448 cheY-homologous receiver domain Varpa_4196 SM00833 Cobalamin synthesis protein cobW C-terminal domain Varpa_4198 SM00342 helix_turn_helix, arabinose operon control protein Varpa_4223 SM00318 Staphylococcal nuclease homologues Varpa_4228 SM00100 Cyclic nucleotide-monophosphate binding domain Varpa_4228 SM00419 helix_turn_helix, cAMP Regulatory protein Varpa_4233 SM00345 helix_turn_helix gluconate operon transcriptional repressor Varpa_4233 SM00895 Varpa_4233 Varpa_4234 SM00062 Bacterial periplasmic substrate-binding proteins Varpa_4237 SM00382 ATPases associated with a variety of cellular activities Varpa_4253 SM00422 helix_turn_helix, mercury resistance Varpa_4255 SM00382 ATPases associated with a variety of cellular activities Varpa_4256 SM00487 DEAD-like helicases superfamily Varpa_4256 SM00490 helicase superfamily c-terminal domain Varpa_4258 SM00382 ATPases associated with a variety of cellular activities Varpa_4262 SM00345 helix_turn_helix gluconate operon transcriptional repressor Varpa_4262 SM00895 Varpa_4262 Varpa_4266 SM01007 Class II Aldolase and Adducin N-terminal domain Varpa_4270 SM00347 helix_turn_helix multiple antibiotic resistance protein Varpa_4273 SM00091 PAS domain Varpa_4273 SM00387 Histidine kinase-like ATPases Varpa_4273 SM00388 His Kinase A (phosphoacceptor) domain Varpa_4277 SM00382 ATPases associated with a variety of cellular activities Varpa_4297 SM00450 Rhodanese Homology Domain Varpa_4302 SM00342 helix_turn_helix, arabinose operon control protein Varpa_4302 SM00478 endonuclease III Varpa_4302 SM01009 AlkA N-terminal domain Varpa_4317 SM00382 ATPases associated with a variety of cellular activities Varpa_4320 SM00382 ATPases associated with a variety of cellular activities Varpa_4324 SM00823 Phosphopantetheine attachment site Varpa_4325 SM00823 Phosphopantetheine attachment site Varpa_4326 SM00822 Varpa_4326 Varpa_4326 SM00823 Phosphopantetheine attachment site Varpa_4326 SM00825 Beta-ketoacyl synthase Varpa_4326 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. Varpa_4327 SM00823 Phosphopantetheine attachment site Varpa_4329 SM00923 MbtH-like protein Varpa_4342 SM00382 ATPases associated with a variety of cellular activities Varpa_4343 SM00382 ATPases associated with a variety of cellular activities Varpa_4346 SM01329 Varpa_4346 Varpa_4366 SM01207 Varpa_4366 Varpa_4376 SM00382 ATPases associated with a variety of cellular activities Varpa_4382 SM00507 HNH nucleases Varpa_4389 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Varpa_4400 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Varpa_4404 SM00346 helix_turn_helix isocitrate lyase regulation Varpa_4407 SM00346 helix_turn_helix isocitrate lyase regulation Varpa_4419 SM00346 helix_turn_helix isocitrate lyase regulation Varpa_4431 SM00382 ATPases associated with a variety of cellular activities Varpa_4432 SM00062 Bacterial periplasmic substrate-binding proteins Varpa_4434 SM00345 helix_turn_helix gluconate operon transcriptional repressor Varpa_4440 SM00382 ATPases associated with a variety of cellular activities Varpa_4441 SM00382 ATPases associated with a variety of cellular activities Varpa_4456 SM00155 Phospholipase D. Active site motifs. Varpa_4463 SM00788 Adenylosuccinate synthetase Varpa_4466 SM01091 Transporter associated domain Varpa_4470 SM00345 helix_turn_helix gluconate operon transcriptional repressor Varpa_4471 SM00421 helix_turn_helix, Lux Regulon Varpa_4472 SM00342 helix_turn_helix, arabinose operon control protein Varpa_4474 SM01007 Class II Aldolase and Adducin N-terminal domain Varpa_4476 SM00062 Bacterial periplasmic substrate-binding proteins Varpa_4480 SM00450 Rhodanese Homology Domain Varpa_4482 SM00487 DEAD-like helicases superfamily Varpa_4482 SM00490 helicase superfamily c-terminal domain Varpa_4487 SM00822 Varpa_4487 Varpa_4488 SM00342 helix_turn_helix, arabinose operon control protein Varpa_4491 SM00342 helix_turn_helix, arabinose operon control protein Varpa_4495 SM00342 helix_turn_helix, arabinose operon control protein Varpa_4503 SM00091 PAS domain Varpa_4503 SM00267 diguanylate cyclase Varpa_4505 SM00052 Putative diguanylate phosphodiesterase Varpa_4510 SM00382 ATPases associated with a variety of cellular activities Varpa_4513 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Varpa_4514 SM01092 CO dehydrogenase flavoprotein C-terminal domain Varpa_4517 SM00923 MbtH-like protein Varpa_4519 SM00823 Phosphopantetheine attachment site Varpa_4529 SM00226 Low molecular weight phosphatase family Varpa_4531 SM00831 Cation transporter/ATPase, N-terminus Varpa_4539 SM00345 helix_turn_helix gluconate operon transcriptional repressor Varpa_4539 SM00895 Varpa_4539 Varpa_4544 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. Varpa_4550 SM00347 helix_turn_helix multiple antibiotic resistance protein Varpa_4561 SM00345 helix_turn_helix gluconate operon transcriptional repressor Varpa_4561 SM00895 Varpa_4561 Varpa_4566 SM00345 helix_turn_helix gluconate operon transcriptional repressor Varpa_4566 SM00895 Varpa_4566 Varpa_4575 SM00919 Malic enzyme, NAD binding domain Varpa_4575 SM01274 Varpa_4575 Varpa_4584 SM00382 ATPases associated with a variety of cellular activities Varpa_4588 SM00387 Histidine kinase-like ATPases Varpa_4588 SM00388 His Kinase A (phosphoacceptor) domain Varpa_4589 SM00448 cheY-homologous receiver domain Varpa_4589 SM00862 Transcriptional regulatory protein, C terminal Varpa_4595 SM00344 helix_turn_helix ASNC type Varpa_4609 SM00450 Rhodanese Homology Domain Varpa_4612 SM00248 ankyrin repeats Varpa_4622 SM00342 helix_turn_helix, arabinose operon control protein Varpa_4626 SM00342 helix_turn_helix, arabinose operon control protein Varpa_4635 SM00421 helix_turn_helix, Lux Regulon Varpa_4635 SM00448 cheY-homologous receiver domain Varpa_4636 SM00387 Histidine kinase-like ATPases Varpa_4636 SM01049 Varpa_4636 Varpa_4639 SM00450 Rhodanese Homology Domain Varpa_4640 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Varpa_4640 SM00387 Histidine kinase-like ATPases Varpa_4640 SM00388 His Kinase A (phosphoacceptor) domain Varpa_4641 SM00448 cheY-homologous receiver domain Varpa_4641 SM00862 Transcriptional regulatory protein, C terminal Varpa_4647 SM00382 ATPases associated with a variety of cellular activities Varpa_4648 SM00382 ATPases associated with a variety of cellular activities Varpa_4659 SM00481 DNA polymerase alpha chain like domain Varpa_4664 SM00421 helix_turn_helix, Lux Regulon Varpa_4664 SM00448 cheY-homologous receiver domain Varpa_4665 SM00387 Histidine kinase-like ATPases Varpa_4665 SM00388 His Kinase A (phosphoacceptor) domain Varpa_4668 SM00448 cheY-homologous receiver domain Varpa_4668 SM00862 Transcriptional regulatory protein, C terminal Varpa_4675 SM00226 Low molecular weight phosphatase family Varpa_4689 SM00984 UDP binding domain Varpa_4696 SM00463 Small MutS-related domain Varpa_4700 SM00062 Bacterial periplasmic substrate-binding proteins Varpa_4703 SM00382 ATPases associated with a variety of cellular activities Varpa_4705 SM00342 helix_turn_helix, arabinose operon control protein Varpa_4707 SM01092 CO dehydrogenase flavoprotein C-terminal domain Varpa_4708 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Varpa_4716 SM00387 Histidine kinase-like ATPases Varpa_4717 SM00448 cheY-homologous receiver domain Varpa_4727 SM00062 Bacterial periplasmic substrate-binding proteins Varpa_4728 SM00382 ATPases associated with a variety of cellular activities Varpa_4731 SM00450 Rhodanese Homology Domain Varpa_4736 SM00382 ATPases associated with a variety of cellular activities Varpa_4748 SM00344 helix_turn_helix ASNC type Varpa_4752 SM01329 Varpa_4752 Varpa_4769 SM00450 Rhodanese Homology Domain Varpa_4770 SM00855 Phosphoglycerate mutase family Varpa_4771 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Varpa_4771 SM00245 tail specific protease Varpa_4774 SM00448 cheY-homologous receiver domain Varpa_4775 SM00421 helix_turn_helix, Lux Regulon Varpa_4775 SM00448 cheY-homologous receiver domain Varpa_4776 SM00387 Histidine kinase-like ATPases Varpa_4782 SM00749 bacterial OsmY and nodulation domain Varpa_4786 SM01034 Sensors of blue-light using FAD Varpa_4794 SM00834 Putative regulatory protein Varpa_4798 SM00978 Varpa_4798 Varpa_4808 SM00382 ATPases associated with a variety of cellular activities Varpa_4811 SM00344 helix_turn_helix ASNC type Varpa_4814 SM00382 ATPases associated with a variety of cellular activities Varpa_4818 SM00937 Varpa_4818 Varpa_4822 SM01091 Transporter associated domain Varpa_4827 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase Varpa_4832 SM00382 ATPases associated with a variety of cellular activities Varpa_4844 SM00957 SecA DEAD-like domain Varpa_4844 SM00958 SecA preprotein cross-linking domain Varpa_4853 SM00421 helix_turn_helix, Lux Regulon Varpa_4853 SM00448 cheY-homologous receiver domain Varpa_4854 SM00387 Histidine kinase-like ATPases Varpa_4854 SM00388 His Kinase A (phosphoacceptor) domain Varpa_4854 SM00448 cheY-homologous receiver domain Varpa_4860 SM00966 SpoVT / AbrB like domain Varpa_4861 SM00988 UreE urease accessory protein, N-terminal domain Varpa_4863 SM00382 ATPases associated with a variety of cellular activities Varpa_4869 SM00448 cheY-homologous receiver domain Varpa_4869 SM00862 Transcriptional regulatory protein, C terminal Varpa_4873 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Varpa_4873 SM00387 Histidine kinase-like ATPases Varpa_4873 SM00388 His Kinase A (phosphoacceptor) domain Varpa_4874 SM00448 cheY-homologous receiver domain Varpa_4874 SM00862 Transcriptional regulatory protein, C terminal Varpa_4882 SM00347 helix_turn_helix multiple antibiotic resistance protein Varpa_4883 SM01329 Varpa_4883 Varpa_4900 SM00354 helix_turn _helix lactose operon repressor Varpa_4902 SM00903 Flavin reductase like domain Varpa_4905 SM00342 helix_turn_helix, arabinose operon control protein Varpa_4919 SM00347 helix_turn_helix multiple antibiotic resistance protein Varpa_4920 SM00062 Bacterial periplasmic substrate-binding proteins Varpa_4922 SM00347 helix_turn_helix multiple antibiotic resistance protein Varpa_4930 SM00240 Forkhead associated domain Varpa_4932 SM00858 Varpa_4932 Varpa_4938 SM00342 helix_turn_helix, arabinose operon control protein Varpa_4939 SM00347 helix_turn_helix multiple antibiotic resistance protein Varpa_4946 SM00869 Autotransporter beta-domain Varpa_4947 SM00862 Transcriptional regulatory protein, C terminal Varpa_4948 SM00448 cheY-homologous receiver domain Varpa_4948 SM00862 Transcriptional regulatory protein, C terminal Varpa_4955 SM00729 Elongator protein 3, MiaB family, Radical SAM Varpa_4958 SM00331 Sigma factor PP2C-like phosphatases Varpa_4958 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain Varpa_4959 SM00220 Serine/Threonine protein kinases, catalytic domain Varpa_4961 SM00072 Guanylate kinase homologues. Varpa_4962 SM01409 Varpa_4962 Varpa_4963 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Varpa_4963 SM00954 Region found in RelA / SpoT proteins Varpa_4968 SM00421 helix_turn_helix, Lux Regulon Varpa_4969 SM00257 Lysin motif Varpa_4973 SM00382 ATPases associated with a variety of cellular activities Varpa_4986 SM00530 Helix-turn-helix XRE-family like proteins Varpa_4987 SM00421 helix_turn_helix, Lux Regulon Varpa_4990 SM00382 ATPases associated with a variety of cellular activities Varpa_4992 SM00478 endonuclease III Varpa_4994 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain Varpa_4994 SM01232 Varpa_4994 Varpa_4995 SM00028 Tetratricopeptide repeats Varpa_4998 SM01400 Varpa_4998 Varpa_5005 SM00382 ATPases associated with a variety of cellular activities Varpa_5006 SM00382 ATPases associated with a variety of cellular activities Varpa_5014 SM00855 Phosphoglycerate mutase family Varpa_5019 SM00797 Allophanate hydrolase subunit 2 Varpa_5020 SM00796 Allophanate hydrolase subunit 1 Varpa_5027 SM00382 ATPases associated with a variety of cellular activities Varpa_5027 SM00962 SRP54-type protein, GTPase domain Varpa_5027 SM00963 SRP54-type protein, helical bundle domain Varpa_5028 SM00387 Histidine kinase-like ATPases Varpa_5028 SM00388 His Kinase A (phosphoacceptor) domain Varpa_5028 SM00448 cheY-homologous receiver domain Varpa_5029 SM00421 helix_turn_helix, Lux Regulon Varpa_5029 SM00448 cheY-homologous receiver domain Varpa_5033 SM00419 helix_turn_helix, cAMP Regulatory protein Varpa_5034 SM00419 helix_turn_helix, cAMP Regulatory protein Varpa_5035 SM00862 Transcriptional regulatory protein, C terminal Varpa_5038 SM00382 ATPases associated with a variety of cellular activities Varpa_5070 SM00347 helix_turn_helix multiple antibiotic resistance protein Varpa_5094 SM00100 Cyclic nucleotide-monophosphate binding domain Varpa_5095 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain Varpa_5101 SM00347 helix_turn_helix multiple antibiotic resistance protein Varpa_5107 SM00382 ATPases associated with a variety of cellular activities Varpa_5108 SM00226 Low molecular weight phosphatase family Varpa_5115 SM00486 DNA polymerase type-B family Varpa_5118 SM00028 Tetratricopeptide repeats Varpa_5119 SM00869 Autotransporter beta-domain Varpa_5122 SM00421 helix_turn_helix, Lux Regulon Varpa_5122 SM00448 cheY-homologous receiver domain Varpa_5123 SM00387 Histidine kinase-like ATPases Varpa_5123 SM00388 His Kinase A (phosphoacceptor) domain Varpa_5123 SM00448 cheY-homologous receiver domain Varpa_5140 SM00882 Coenzyme A transferase Varpa_5141 SM00882 Coenzyme A transferase Varpa_5142 SM00346 helix_turn_helix isocitrate lyase regulation Varpa_5146 SM00028 Tetratricopeptide repeats Varpa_5150 SM00858 Varpa_5150 Varpa_5156 SM00028 Tetratricopeptide repeats Varpa_5161 SM00382 ATPases associated with a variety of cellular activities Varpa_5164 SM00382 ATPases associated with a variety of cellular activities Varpa_5174 SM00382 ATPases associated with a variety of cellular activities Varpa_5183 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Varpa_5183 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Varpa_5184 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Varpa_5195 SM00881 CoA binding domain Varpa_5199 SM00091 PAS domain Varpa_5202 SM00100 Cyclic nucleotide-monophosphate binding domain Varpa_5203 SM00749 bacterial OsmY and nodulation domain Varpa_5209 SM00530 Helix-turn-helix XRE-family like proteins Varpa_5216 SM00563 Phosphate acyltransferases Varpa_5220 SM00732 Likely ribonuclease with RNase H fold. Varpa_5223 SM00073 Histidine Phosphotransfer domain Varpa_5223 SM00260 Two component signalling adaptor domain Varpa_5223 SM00387 Histidine kinase-like ATPases Varpa_5223 SM00448 cheY-homologous receiver domain Varpa_5223 SM01231 Varpa_5223 Varpa_5224 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Varpa_5226 SM00448 cheY-homologous receiver domain Varpa_5227 SM00448 cheY-homologous receiver domain Varpa_5232 SM00798 AICARFT/IMPCHase bienzyme Varpa_5232 SM00851 MGS-like domain Varpa_5242 SM00382 ATPases associated with a variety of cellular activities Varpa_5244 SM00354 helix_turn _helix lactose operon repressor Varpa_5256 SM00530 Helix-turn-helix XRE-family like proteins Varpa_5268 SM00421 helix_turn_helix, Lux Regulon Varpa_5281 SM01351 Varpa_5281 Varpa_5284 SM00382 ATPases associated with a variety of cellular activities Varpa_5289 SM00563 Phosphate acyltransferases Varpa_5293 SM00278 Helix-hairpin-helix DNA-binding motif class 1 Varpa_5312 SM00996 S-adenosyl-L-homocysteine hydrolase Varpa_5312 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain Varpa_5322 SM00382 ATPases associated with a variety of cellular activities Varpa_5330 SM00382 ATPases associated with a variety of cellular activities Varpa_5351 SM00346 helix_turn_helix isocitrate lyase regulation Varpa_5355 SM00878 Biotin carboxylase C-terminal domain Varpa_5361 SM00342 helix_turn_helix, arabinose operon control protein Varpa_5367 SM00387 Histidine kinase-like ATPases Varpa_5367 SM00388 His Kinase A (phosphoacceptor) domain Varpa_5367 SM00448 cheY-homologous receiver domain Varpa_5368 SM00421 helix_turn_helix, Lux Regulon Varpa_5375 SM00947 Carbonic anhydrase Varpa_5376 SM00422 helix_turn_helix, mercury resistance Varpa_5377 SM00849 Metallo-beta-lactamase superfamily Varpa_5378 SM00364 Leucine-rich repeats, bacterial type Varpa_5378 SM00369 Leucine-rich repeats, typical (most populated) subfamily Varpa_5383 SM00345 helix_turn_helix gluconate operon transcriptional repressor Varpa_5383 SM00895 Varpa_5383 Varpa_5384 SM00382 ATPases associated with a variety of cellular activities Varpa_5389 SM00563 Phosphate acyltransferases Varpa_5395 SM00046 Diacylglycerol kinase catalytic domain (presumed) Varpa_5397 SM00014 Acid phosphatase homologues Varpa_5398 SM00870 Varpa_5398 Varpa_5403 SM00822 Varpa_5403 Varpa_5405 SM00382 ATPases associated with a variety of cellular activities Varpa_5406 SM00382 ATPases associated with a variety of cellular activities Varpa_5411 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Varpa_5416 SM00382 ATPases associated with a variety of cellular activities Varpa_5420 SM00116 Domain in cystathionine beta-synthase and other proteins. Varpa_5420 SM01091 Transporter associated domain Varpa_5422 SM00344 helix_turn_helix ASNC type Varpa_5424 SM00062 Bacterial periplasmic substrate-binding proteins Varpa_5427 SM00849 Metallo-beta-lactamase superfamily Varpa_5428 SM00382 ATPases associated with a variety of cellular activities Varpa_5429 SM00155 Phospholipase D. Active site motifs. Varpa_5440 SM00421 helix_turn_helix, Lux Regulon Varpa_5455 SM00878 Biotin carboxylase C-terminal domain Varpa_5470 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Varpa_5472 SM00344 helix_turn_helix ASNC type Varpa_5477 SM00749 bacterial OsmY and nodulation domain Varpa_5497 SM00487 DEAD-like helicases superfamily Varpa_5497 SM00490 helicase superfamily c-terminal domain Varpa_5505 SM00382 ATPases associated with a variety of cellular activities Varpa_5508 SM00382 ATPases associated with a variety of cellular activities Varpa_5519 SM00729 Elongator protein 3, MiaB family, Radical SAM Varpa_5528 SM00382 ATPases associated with a variety of cellular activities Varpa_5528 SM01086 C-terminal, D2-small domain, of ClpB protein Varpa_5555 SM00387 Histidine kinase-like ATPases Varpa_5555 SM00388 His Kinase A (phosphoacceptor) domain Varpa_5556 SM00382 ATPases associated with a variety of cellular activities Varpa_5556 SM00448 cheY-homologous receiver domain Varpa_5561 SM00342 helix_turn_helix, arabinose operon control protein Varpa_5568 SM00829 Enoylreductase Varpa_5569 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Varpa_5569 SM00387 Histidine kinase-like ATPases Varpa_5569 SM00388 His Kinase A (phosphoacceptor) domain Varpa_5570 SM00448 cheY-homologous receiver domain Varpa_5570 SM00862 Transcriptional regulatory protein, C terminal Varpa_5586 SM00322 K homology RNA-binding domain Varpa_5589 SM01382 Varpa_5589 Varpa_5589 SM01383 Varpa_5589 Varpa_5595 SM01403 Varpa_5595 Varpa_5597 SM00838 Elongation factor G C-terminus Varpa_5597 SM00889 Elongation factor G, domain IV Varpa_5600 SM00936 Penicillin-binding protein 5, C-terminal domain Varpa_5605 SM01004 Delta-aminolevulinic acid dehydratase Varpa_5612 SM00822 Varpa_5612 Varpa_5617 SM00382 ATPases associated with a variety of cellular activities Varpa_5618 SM00382 ATPases associated with a variety of cellular activities Varpa_5621 SM00342 helix_turn_helix, arabinose operon control protein Varpa_5628 SM00257 Lysin motif Varpa_5631 SM00450 Rhodanese Homology Domain Varpa_5640 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Varpa_5647 SM00382 ATPases associated with a variety of cellular activities Varpa_5649 SM00347 helix_turn_helix multiple antibiotic resistance protein Varpa_5657 SM00984 UDP binding domain Varpa_5663 SM00327 von Willebrand factor (vWF) type A domain Varpa_5669 SM00387 Histidine kinase-like ATPases Varpa_5673 SM00829 Enoylreductase Varpa_5676 SM00387 Histidine kinase-like ATPases Varpa_5676 SM00388 His Kinase A (phosphoacceptor) domain Varpa_5677 SM00448 cheY-homologous receiver domain Varpa_5677 SM00862 Transcriptional regulatory protein, C terminal Varpa_5679 SM00363 S4 RNA-binding domain Varpa_5684 SM00195 Dual specificity phosphatase, catalytic domain Varpa_5685 SM00829 Enoylreductase Varpa_5686 SM00838 Elongation factor G C-terminus Varpa_5686 SM00889 Elongation factor G, domain IV Varpa_5689 SM00448 cheY-homologous receiver domain Varpa_5689 SM00862 Transcriptional regulatory protein, C terminal Varpa_5690 SM00387 Histidine kinase-like ATPases Varpa_5690 SM00388 His Kinase A (phosphoacceptor) domain Varpa_5704 SM00849 Metallo-beta-lactamase superfamily Varpa_5708 SM00419 helix_turn_helix, cAMP Regulatory protein Varpa_5710 SM00382 ATPases associated with a variety of cellular activities Varpa_5715 SM00382 ATPases associated with a variety of cellular activities Varpa_5728 SM00421 helix_turn_helix, Lux Regulon Varpa_5729 SM00564 beta-propeller repeat Varpa_5735 SM00564 beta-propeller repeat Varpa_5737 SM00382 ATPases associated with a variety of cellular activities Varpa_5742 SM00861 Transketolase, pyrimidine binding domain Varpa_5743 SM00822 Varpa_5743 Varpa_5749 SM00347 helix_turn_helix multiple antibiotic resistance protein Varpa_5754 SM00342 helix_turn_helix, arabinose operon control protein Varpa_5757 SM00662 RNA polymerases D Varpa_5758 SM00363 S4 RNA-binding domain Varpa_5758 SM01390 Varpa_5758 Varpa_5771 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. Varpa_5772 SM01374 Varpa_5772 Varpa_5784 SM00869 Autotransporter beta-domain Varpa_5786 SM00487 DEAD-like helicases superfamily Varpa_5786 SM00490 helicase superfamily c-terminal domain Varpa_5798 SM00563 Phosphate acyltransferases Varpa_5800 SM00530 Helix-turn-helix XRE-family like proteins Varpa_5801 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family Varpa_5802 SM00986 Uracil DNA glycosylase superfamily Varpa_5802 SM00987 UreE urease accessory protein, C-terminal domain Varpa_5805 SM00420 helix_turn_helix, Deoxyribose operon repressor Varpa_5805 SM01134 Varpa_5805 Varpa_5811 SM01001 AIR carboxylase Varpa_5813 SM00530 Helix-turn-helix XRE-family like proteins Varpa_5819 SM00344 helix_turn_helix ASNC type Varpa_5828 SM00849 Metallo-beta-lactamase superfamily Varpa_5835 SM00257 Lysin motif Varpa_5841 SM01323 Varpa_5841 Varpa_5843 SM00344 helix_turn_helix ASNC type Varpa_5848 SM00062 Bacterial periplasmic substrate-binding proteins Varpa_5848 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. Varpa_5852 SM00382 ATPases associated with a variety of cellular activities Varpa_5862 SM01007 Class II Aldolase and Adducin N-terminal domain Varpa_5865 SM00861 Transketolase, pyrimidine binding domain Varpa_5866 SM00344 helix_turn_helix ASNC type Varpa_5869 SM00925 MltA specific insert domain Varpa_5872 SM00421 helix_turn_helix, Lux Regulon Varpa_5872 SM00448 cheY-homologous receiver domain Varpa_5873 SM00091 PAS domain Varpa_5873 SM00387 Histidine kinase-like ATPases Varpa_5873 SM00388 His Kinase A (phosphoacceptor) domain Varpa_5891 SM01322 Varpa_5891 Varpa_5909 SM00849 Metallo-beta-lactamase superfamily Varpa_5910 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain Varpa_5910 SM01080 Varpa_5910 Varpa_5911 SM00240 Forkhead associated domain Varpa_5912 SM00331 Sigma factor PP2C-like phosphatases Varpa_5912 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain Varpa_5914 SM00881 CoA binding domain Varpa_5916 SM00859 Semialdehyde dehydrogenase, NAD binding domain Varpa_5921 SM00382 ATPases associated with a variety of cellular activities Varpa_5923 SM00448 cheY-homologous receiver domain Varpa_5923 SM00862 Transcriptional regulatory protein, C terminal Varpa_5925 SM00387 Histidine kinase-like ATPases Varpa_5925 SM00388 His Kinase A (phosphoacceptor) domain Varpa_5929 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain Varpa_5930 SM00151 SWI complex, BAF60b domains Varpa_5930 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain Varpa_5930 SM00437 Bacterial DNA topoisomerase I DNA-binding domain Varpa_5930 SM00493 Varpa_5930 Varpa_5935 SM00345 helix_turn_helix gluconate operon transcriptional repressor Varpa_5939 SM00487 DEAD-like helicases superfamily Varpa_5939 SM00490 helicase superfamily c-terminal domain Varpa_5945 SM00345 helix_turn_helix gluconate operon transcriptional repressor Varpa_5945 SM00895 Varpa_5945 Varpa_5951 SM01130 Varpa_5951 Varpa_5953 SM00530 Helix-turn-helix XRE-family like proteins Varpa_5960 SM00880 Varpa_5960 Varpa_5960 SM01118 Varpa_5960 Varpa_5965 SM01329 Varpa_5965 Varpa_5973 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Varpa_5974 SM00861 Transketolase, pyrimidine binding domain Varpa_5977 SM01011 Aminopeptidase P, N-terminal domain Varpa_5982 SM01359 Varpa_5982 Varpa_5982 SM01360 Varpa_5982 Varpa_5991 SM00919 Malic enzyme, NAD binding domain Varpa_5991 SM01274 Varpa_5991 Varpa_5994 SM00650 Ribosomal RNA adenine dimethylases Varpa_6011 SM00360 RNA recognition motif Varpa_6015 SM00116 Domain in cystathionine beta-synthase and other proteins. Varpa_6018 SM00100 Cyclic nucleotide-monophosphate binding domain Varpa_6021 SM01234 Varpa_6021