locus-tag class description Vapar_0001 PF00308 Bacterial dnaA protein Vapar_0001 PF11638 DnaA N-terminal domain Vapar_0001 PF08299 Bacterial dnaA protein helix-turn-helix Vapar_0002 PF00712 DNA polymerase III beta subunit, N-terminal domain Vapar_0002 PF02768 DNA polymerase III beta subunit, C-terminal domain Vapar_0002 PF02767 DNA polymerase III beta subunit, central domain Vapar_0003 PF00204 DNA gyrase B Vapar_0003 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vapar_0003 PF18053 DNA gyrase B subunit insert domain Vapar_0003 PF00986 DNA gyrase B subunit, carboxyl terminus Vapar_0003 PF01751 Toprim domain Vapar_0008 PF00149 Calcineurin-like phosphoesterase Vapar_0010 PF09411 Lipid A 3-O-deacylase (PagL) Vapar_0011 PF03706 Lysylphosphatidylglycerol synthase TM region Vapar_0012 PF13091 PLD-like domain Vapar_0013 PF03372 Endonuclease/Exonuclease/phosphatase family Vapar_0017 PF02678 Pirin Vapar_0017 PF05726 Pirin C-terminal cupin domain Vapar_0019 PF00912 Transglycosylase Vapar_0023 PF06123 Inner membrane protein CreD Vapar_0024 PF00912 Transglycosylase Vapar_0024 PF00905 Penicillin binding protein transpeptidase domain Vapar_0024 PF17092 Penicillin-binding protein OB-like domain Vapar_0026 PF00512 His Kinase A (phospho-acceptor) domain Vapar_0026 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vapar_0026 PF00672 HAMP domain Vapar_0027 PF00072 Response regulator receiver domain Vapar_0027 PF00486 Transcriptional regulatory protein, C terminal Vapar_0029 PF00376 MerR family regulatory protein Vapar_0029 PF09278 MerR, DNA binding Vapar_0030 PF00403 Heavy-metal-associated domain Vapar_0031 PF00403 Heavy-metal-associated domain Vapar_0032 PF00583 Acetyltransferase (GNAT) family Vapar_0033 PF00109 Beta-ketoacyl synthase, N-terminal domain Vapar_0033 PF02801 Beta-ketoacyl synthase, C-terminal domain Vapar_0036 PF00486 Transcriptional regulatory protein, C terminal Vapar_0036 PF00072 Response regulator receiver domain Vapar_0037 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vapar_0037 PF00512 His Kinase A (phospho-acceptor) domain Vapar_0039 PF00724 NADH:flavin oxidoreductase / NADH oxidase family Vapar_0041 PF00378 Enoyl-CoA hydratase/isomerase Vapar_0042 PF00043 Glutathione S-transferase, C-terminal domain Vapar_0042 PF02798 Glutathione S-transferase, N-terminal domain Vapar_0045 PF13932 GidA associated domain Vapar_0045 PF01134 Glucose inhibited division protein A Vapar_0046 PF02527 rRNA small subunit methyltransferase G Vapar_0047 PF01810 LysE type translocator Vapar_0048 PF13614 AAA domain Vapar_0050 PF02195 ParB-like nuclease domain Vapar_0050 PF17762 HTH domain found in ParB protein Vapar_0052 PF02913 FAD linked oxidases, C-terminal domain Vapar_0052 PF01565 FAD binding domain Vapar_0054 PF01923 Cobalamin adenosyltransferase Vapar_0061 PF03466 LysR substrate binding domain Vapar_0061 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_0065 PF03776 Septum formation topological specificity factor MinE Vapar_0066 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Vapar_0067 PF03775 Septum formation inhibitor MinC, C-terminal domain Vapar_0067 PF05209 Septum formation inhibitor MinC, N-terminal domain Vapar_0068 PF00860 Permease family Vapar_0069 PF03061 Thioesterase superfamily Vapar_0071 PF13193 AMP-binding enzyme C-terminal domain Vapar_0071 PF00501 AMP-binding enzyme Vapar_0072 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Vapar_0072 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Vapar_0073 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_0074 PF05853 beta-keto acid cleavage enzyme Vapar_0076 PF00743 Flavin-binding monooxygenase-like Vapar_0077 PF02954 Bacterial regulatory protein, Fis family Vapar_0077 PF00158 Sigma-54 interaction domain Vapar_0077 PF01590 GAF domain Vapar_0078 PF01361 Tautomerase enzyme Vapar_0080 PF03466 LysR substrate binding domain Vapar_0080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_0081 PF07519 Tannase and feruloyl esterase Vapar_0082 PF12833 Helix-turn-helix domain Vapar_0082 PF02311 AraC-like ligand binding domain Vapar_0083 PF00005 ABC transporter Vapar_0084 PF00005 ABC transporter Vapar_0084 PF12399 Branched-chain amino acid ATP-binding cassette transporter Vapar_0086 PF02653 Branched-chain amino acid transport system / permease component Vapar_0089 PF13193 AMP-binding enzyme C-terminal domain Vapar_0089 PF00501 AMP-binding enzyme Vapar_0092 PF01202 Shikimate kinase Vapar_0099 PF07992 Pyridine nucleotide-disulphide oxidoreductase Vapar_0101 PF04199 Putative cyclase Vapar_0102 PF00528 Binding-protein-dependent transport system inner membrane component Vapar_0103 PF00528 Binding-protein-dependent transport system inner membrane component Vapar_0104 PF00005 ABC transporter Vapar_0107 PF13193 AMP-binding enzyme C-terminal domain Vapar_0107 PF00501 AMP-binding enzyme Vapar_0108 PF02743 Cache domain Vapar_0108 PF00211 Adenylate and Guanylate cyclase catalytic domain Vapar_0108 PF00672 HAMP domain Vapar_0109 PF09859 Oxygenase, catalysing oxidative methylation of damaged DNA Vapar_0110 PF01557 Fumarylacetoacetate (FAA) hydrolase family Vapar_0111 PF01425 Amidase Vapar_0112 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Vapar_0114 PF03480 Bacterial extracellular solute-binding protein, family 7 Vapar_0115 PF01614 Bacterial transcriptional regulator Vapar_0115 PF09339 IclR helix-turn-helix domain Vapar_0116 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV Vapar_0117 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_0117 PF03466 LysR substrate binding domain Vapar_0118 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Vapar_0118 PF02770 Acyl-CoA dehydrogenase, middle domain Vapar_0118 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Vapar_0119 PF02515 CoA-transferase family III Vapar_0123 PF03167 Uracil DNA glycosylase superfamily Vapar_0124 PF01979 Amidohydrolase family Vapar_0125 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_0127 PF00107 Zinc-binding dehydrogenase Vapar_0127 PF08240 Alcohol dehydrogenase GroES-like domain Vapar_0128 PF05853 beta-keto acid cleavage enzyme Vapar_0130 PF04444 Catechol dioxygenase N terminus Vapar_0130 PF00775 Dioxygenase Vapar_0131 PF00356 Bacterial regulatory proteins, lacI family Vapar_0134 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_0134 PF03466 LysR substrate binding domain Vapar_0135 PF00795 Carbon-nitrogen hydrolase Vapar_0137 PF04960 Glutaminase Vapar_0140 PF01613 Flavin reductase like domain Vapar_0141 PF07670 Nucleoside recognition Vapar_0142 PF13091 PLD-like domain Vapar_0145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_0145 PF03466 LysR substrate binding domain Vapar_0147 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain Vapar_0147 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain Vapar_0149 PF00291 Pyridoxal-phosphate dependent enzyme Vapar_0149 PF13291 ACT domain Vapar_0150 PF17862 AAA+ lid domain Vapar_0150 PF00004 ATPase family associated with various cellular activities (AAA) Vapar_0150 PF01434 Peptidase family M41 Vapar_0152 PF01156 Inosine-uridine preferring nucleoside hydrolase Vapar_0153 PF00570 HRDC domain Vapar_0153 PF16124 RecQ zinc-binding Vapar_0153 PF09382 RQC domain Vapar_0153 PF00270 DEAD/DEAH box helicase Vapar_0153 PF00271 Helicase conserved C-terminal domain Vapar_0155 PF00528 Binding-protein-dependent transport system inner membrane component Vapar_0156 PF00005 ABC transporter Vapar_0157 PF07702 UTRA domain Vapar_0157 PF00392 Bacterial regulatory proteins, gntR family Vapar_0158 PF00221 Aromatic amino acid lyase Vapar_0159 PF01175 Urocanase Rossmann-like domain Vapar_0159 PF17392 Urocanase C-terminal domain Vapar_0159 PF17391 Urocanase N-terminal domain Vapar_0163 PF05962 HutD Vapar_0164 PF01979 Amidohydrolase family Vapar_0165 PF01979 Amidohydrolase family Vapar_0167 PF02965 Vitamin B12 dependent methionine synthase, activation domain Vapar_0167 PF02310 B12 binding domain Vapar_0167 PF02607 B12 binding domain Vapar_0167 PF00809 Pterin binding enzyme Vapar_0167 PF02574 Homocysteine S-methyltransferase Vapar_0171 PF02574 Homocysteine S-methyltransferase Vapar_0171 PF02607 B12 binding domain Vapar_0171 PF02310 B12 binding domain Vapar_0171 PF02965 Vitamin B12 dependent methionine synthase, activation domain Vapar_0171 PF00809 Pterin binding enzyme Vapar_0175 PF01979 Amidohydrolase family Vapar_0176 PF17938 Tetracyclin repressor-like, C-terminal domain Vapar_0176 PF00440 Bacterial regulatory proteins, tetR family Vapar_0177 PF00175 Oxidoreductase NAD-binding domain Vapar_0177 PF00970 Oxidoreductase FAD-binding domain Vapar_0178 PF00037 4Fe-4S binding domain Vapar_0182 PF13458 Periplasmic binding protein Vapar_0183 PF02653 Branched-chain amino acid transport system / permease component Vapar_0185 PF00005 ABC transporter Vapar_0185 PF12399 Branched-chain amino acid ATP-binding cassette transporter Vapar_0186 PF00005 ABC transporter Vapar_0187 PF00857 Isochorismatase family Vapar_0189 PF01799 [2Fe-2S] binding domain Vapar_0189 PF00111 2Fe-2S iron-sulfur cluster binding domain Vapar_0190 PF00034 Cytochrome c Vapar_0190 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase Vapar_0190 PF13442 Cytochrome C oxidase, cbb3-type, subunit III Vapar_0200 PF07724 AAA domain (Cdc48 subfamily) Vapar_0200 PF00004 ATPase family associated with various cellular activities (AAA) Vapar_0200 PF17871 AAA lid domain Vapar_0200 PF10431 C-terminal, D2-small domain, of ClpB protein Vapar_0201 PF04717 Type VI secretion system, phage-baseplate injector Vapar_0201 PF16671 Actin cross-linking domain Vapar_0212 PF13677 Membrane MotB of proton-channel complex MotA/MotB Vapar_0212 PF00691 OmpA family Vapar_0215 PF00069 Protein kinase domain Vapar_0215 PF13360 PQQ-like domain Vapar_0216 PF01078 Magnesium chelatase, subunit ChlI Vapar_0216 PF13335 Magnesium chelatase, subunit ChlI C-terminal Vapar_0218 PF00543 Nitrogen regulatory protein P-II Vapar_0219 PF00909 Ammonium Transporter Family Vapar_0220 PF08450 SMP-30/Gluconolactonase/LRE-like region Vapar_0221 PF03466 LysR substrate binding domain Vapar_0221 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_0222 PF02913 FAD linked oxidases, C-terminal domain Vapar_0222 PF01565 FAD binding domain Vapar_0223 PF01565 FAD binding domain Vapar_0224 PF13183 4Fe-4S dicluster domain Vapar_0224 PF02754 Cysteine-rich domain Vapar_0226 PF00255 Glutathione peroxidase Vapar_0228 PF07690 Major Facilitator Superfamily Vapar_0229 PF01168 Alanine racemase, N-terminal domain Vapar_0229 PF00842 Alanine racemase, C-terminal domain Vapar_0231 PF03466 LysR substrate binding domain Vapar_0231 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_0234 PF08546 Ketopantoate reductase PanE/ApbA C terminal Vapar_0234 PF02558 Ketopantoate reductase PanE/ApbA Vapar_0235 PF00596 Class II Aldolase and Adducin N-terminal domain Vapar_0236 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_0237 PF00920 Dehydratase family Vapar_0239 PF03328 HpcH/HpaI aldolase/citrate lyase family Vapar_0240 PF01557 Fumarylacetoacetate (FAA) hydrolase family Vapar_0242 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase Vapar_0243 PF00171 Aldehyde dehydrogenase family Vapar_0244 PF01557 Fumarylacetoacetate (FAA) hydrolase family Vapar_0245 PF01557 Fumarylacetoacetate (FAA) hydrolase family Vapar_0246 PF01047 MarR family Vapar_0248 PF05593 RHS Repeat Vapar_0248 PF03527 RHS protein Vapar_0248 PF03527 RHS protein Vapar_0248 PF05593 RHS Repeat Vapar_0250 PF04717 Type VI secretion system, phage-baseplate injector Vapar_0251 PF18073 Rubredoxin metal binding domain Vapar_0253 PF04381 Putative exonuclease, RdgC Vapar_0254 PF01063 Amino-transferase class IV Vapar_0258 PF00672 HAMP domain Vapar_0258 PF00512 His Kinase A (phospho-acceptor) domain Vapar_0258 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vapar_0259 PF00486 Transcriptional regulatory protein, C terminal Vapar_0259 PF00072 Response regulator receiver domain Vapar_0260 PF01266 FAD dependent oxidoreductase Vapar_0262 PF00109 Beta-ketoacyl synthase, N-terminal domain Vapar_0262 PF02801 Beta-ketoacyl synthase, C-terminal domain Vapar_0263 PF07690 Major Facilitator Superfamily Vapar_0265 PF01425 Amidase Vapar_0267 PF00528 Binding-protein-dependent transport system inner membrane component Vapar_0268 PF00005 ABC transporter Vapar_0270 PF02608 ABC transporter substrate-binding protein PnrA-like Vapar_0273 PF00857 Isochorismatase family Vapar_0275 PF00857 Isochorismatase family Vapar_0276 PF07729 FCD domain Vapar_0276 PF00392 Bacterial regulatory proteins, gntR family Vapar_0277 PF03372 Endonuclease/Exonuclease/phosphatase family Vapar_0278 PF00156 Phosphoribosyl transferase domain Vapar_0280 PF02637 GatB domain Vapar_0280 PF02934 GatB/GatE catalytic domain Vapar_0281 PF01425 Amidase Vapar_0282 PF02686 Glu-tRNAGln amidotransferase C subunit Vapar_0286 PF03717 Penicillin-binding Protein dimerisation domain Vapar_0286 PF00905 Penicillin binding protein transpeptidase domain Vapar_0288 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_0289 PF04209 homogentisate 1,2-dioxygenase Vapar_0291 PF01494 FAD binding domain Vapar_0292 PF00753 Metallo-beta-lactamase superfamily Vapar_0294 PF02146 Sir2 family Vapar_0298 PF09383 NIL domain Vapar_0298 PF00005 ABC transporter Vapar_0299 PF02405 Permease MlaE Vapar_0300 PF03466 LysR substrate binding domain Vapar_0300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_0301 PF00732 GMC oxidoreductase Vapar_0301 PF05199 GMC oxidoreductase Vapar_0303 PF01266 FAD dependent oxidoreductase Vapar_0304 PF04324 BFD-like [2Fe-2S] binding domain Vapar_0304 PF07992 Pyridine nucleotide-disulphide oxidoreductase Vapar_0306 PF00528 Binding-protein-dependent transport system inner membrane component Vapar_0307 PF00528 Binding-protein-dependent transport system inner membrane component Vapar_0308 PF00005 ABC transporter Vapar_0308 PF08402 TOBE domain Vapar_0310 PF00171 Aldehyde dehydrogenase family Vapar_0313 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Vapar_0313 PF00205 Thiamine pyrophosphate enzyme, central domain Vapar_0313 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Vapar_0315 PF01925 Sulfite exporter TauE/SafE Vapar_0317 PF01970 Tripartite tricarboxylate transporter TctA family Vapar_0318 PF07331 Tripartite tricarboxylate transporter TctB family Vapar_0319 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Vapar_0321 PF01253 Translation initiation factor SUI1 Vapar_0322 PF00271 Helicase conserved C-terminal domain Vapar_0322 PF00270 DEAD/DEAH box helicase Vapar_0323 PF16200 C-terminal region of band_7 Vapar_0323 PF01145 SPFH domain / Band 7 family Vapar_0324 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Vapar_0324 PF02770 Acyl-CoA dehydrogenase, middle domain Vapar_0324 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Vapar_0326 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Vapar_0326 PF00289 Biotin carboxylase, N-terminal domain Vapar_0326 PF02785 Biotin carboxylase C-terminal domain Vapar_0327 PF01039 Carboxyl transferase domain Vapar_0328 PF00990 Diguanylate cyclase, GGDEF domain Vapar_0328 PF03707 Bacterial signalling protein N terminal repeat Vapar_0328 PF00563 EAL domain Vapar_0330 PF04286 Protein of unknown function (DUF445) Vapar_0331 PF07687 Peptidase dimerisation domain Vapar_0331 PF01546 Peptidase family M20/M25/M40 Vapar_0332 PF03009 Glycerophosphoryl diester phosphodiesterase family Vapar_0333 PF07687 Peptidase dimerisation domain Vapar_0333 PF01546 Peptidase family M20/M25/M40 Vapar_0336 PF00384 Molybdopterin oxidoreductase Vapar_0336 PF01568 Molydopterin dinucleotide binding domain Vapar_0336 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Vapar_0340 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Vapar_0340 PF00370 FGGY family of carbohydrate kinases, N-terminal domain Vapar_0341 PF00107 Zinc-binding dehydrogenase Vapar_0341 PF08240 Alcohol dehydrogenase GroES-like domain Vapar_0342 PF02653 Branched-chain amino acid transport system / permease component Vapar_0343 PF00005 ABC transporter Vapar_0344 PF13407 Periplasmic binding protein domain Vapar_0345 PF12833 Helix-turn-helix domain Vapar_0346 PF02515 CoA-transferase family III Vapar_0352 PF03466 LysR substrate binding domain Vapar_0352 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_0353 PF07883 Cupin domain Vapar_0354 PF01557 Fumarylacetoacetate (FAA) hydrolase family Vapar_0355 PF01494 FAD binding domain Vapar_0356 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_0357 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_0358 PF04324 BFD-like [2Fe-2S] binding domain Vapar_0358 PF07992 Pyridine nucleotide-disulphide oxidoreductase Vapar_0362 PF00005 ABC transporter Vapar_0363 PF00005 ABC transporter Vapar_0363 PF12399 Branched-chain amino acid ATP-binding cassette transporter Vapar_0364 PF11862 Domain of unknown function (DUF3382) Vapar_0364 PF02653 Branched-chain amino acid transport system / permease component Vapar_0365 PF02653 Branched-chain amino acid transport system / permease component Vapar_0367 PF00137 ATP synthase subunit C Vapar_0369 PF01791 DeoC/LacD family aldolase Vapar_0370 PF00248 Aldo/keto reductase family Vapar_0371 PF02653 Branched-chain amino acid transport system / permease component Vapar_0372 PF00005 ABC transporter Vapar_0374 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Vapar_0374 PF00370 FGGY family of carbohydrate kinases, N-terminal domain Vapar_0375 PF16901 C-terminal domain of alpha-glycerophosphate oxidase Vapar_0375 PF01266 FAD dependent oxidoreductase Vapar_0378 PF17755 UvrA DNA-binding domain Vapar_0378 PF17760 UvrA interaction domain Vapar_0379 PF00436 Single-strand binding protein family Vapar_0382 PF01709 Transcriptional regulator Vapar_0386 PF00296 Luciferase-like monooxygenase Vapar_0390 PF01627 Hpt domain Vapar_0390 PF00486 Transcriptional regulatory protein, C terminal Vapar_0390 PF00072 Response regulator receiver domain Vapar_0391 PF05222 Alanine dehydrogenase/PNT, N-terminal domain Vapar_0391 PF01262 Alanine dehydrogenase/PNT, C-terminal domain Vapar_0392 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch Vapar_0393 PF02233 NAD(P) transhydrogenase beta subunit Vapar_0394 PF13193 AMP-binding enzyme C-terminal domain Vapar_0394 PF00501 AMP-binding enzyme Vapar_0395 PF00528 Binding-protein-dependent transport system inner membrane component Vapar_0396 PF00528 Binding-protein-dependent transport system inner membrane component Vapar_0396 PF12911 N-terminal TM domain of oligopeptide transport permease C Vapar_0397 PF00005 ABC transporter Vapar_0397 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Vapar_0398 PF00005 ABC transporter Vapar_0398 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Vapar_0399 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Vapar_0400 PF01048 Phosphorylase superfamily Vapar_0401 PF01544 CorA-like Mg2+ transporter protein Vapar_0402 PF13361 UvrD-like helicase C-terminal domain Vapar_0402 PF00580 UvrD/REP helicase N-terminal domain Vapar_0403 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein Vapar_0404 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 Vapar_0405 PF02603 HPr Serine kinase N terminus Vapar_0405 PF07475 HPr Serine kinase C-terminal domain Vapar_0406 PF01475 Ferric uptake regulator family Vapar_0407 PF04355 SmpA / OmlA family Vapar_0408 PF01113 Dihydrodipicolinate reductase, N-terminus Vapar_0408 PF05173 Dihydrodipicolinate reductase, C-terminus Vapar_0409 PF01618 MotA/TolQ/ExbB proton channel family Vapar_0410 PF02472 Biopolymer transport protein ExbD/TolR Vapar_0411 PF00343 Carbohydrate phosphorylase Vapar_0412 PF08323 Starch synthase catalytic domain Vapar_0412 PF00534 Glycosyl transferases group 1 Vapar_0413 PF00483 Nucleotidyl transferase Vapar_0414 PF18390 Glycogen debranching enzyme C-terminal domain Vapar_0414 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) Vapar_0414 PF00128 Alpha amylase, catalytic domain Vapar_0415 PF00128 Alpha amylase, catalytic domain Vapar_0415 PF02806 Alpha amylase, C-terminal all-beta domain Vapar_0415 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) Vapar_0416 PF00128 Alpha amylase, catalytic domain Vapar_0417 PF13454 FAD-NAD(P)-binding Vapar_0421 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_0422 PF13603 Leucyl-tRNA synthetase, Domain 2 Vapar_0422 PF08264 Anticodon-binding domain of tRNA Vapar_0422 PF09334 tRNA synthetases class I (M) Vapar_0422 PF00133 tRNA synthetases class I (I, L, M and V) Vapar_0425 PF00171 Aldehyde dehydrogenase family Vapar_0427 PF02705 K+ potassium transporter Vapar_0431 PF03594 Benzoate membrane transport protein Vapar_0432 PF02951 Prokaryotic glutathione synthetase, N-terminal domain Vapar_0432 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain Vapar_0434 PF00593 TonB dependent receptor Vapar_0434 PF07715 TonB-dependent Receptor Plug Domain Vapar_0435 PF13230 Glutamine amidotransferases class-II Vapar_0437 PF07690 Major Facilitator Superfamily Vapar_0438 PF10005 zinc-ribbon domain Vapar_0438 PF15887 Putative zinc-binding metallo-peptidase Vapar_0440 PF00365 Phosphofructokinase Vapar_0441 PF00114 Pilin (bacterial filament) Vapar_0441 PF07963 Prokaryotic N-terminal methylation motif Vapar_0444 PF00378 Enoyl-CoA hydratase/isomerase Vapar_0445 PF02803 Thiolase, C-terminal domain Vapar_0445 PF00108 Thiolase, N-terminal domain Vapar_0447 PF03466 LysR substrate binding domain Vapar_0447 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_0451 PF06250 YhcG PDDEXK nuclease domain Vapar_0451 PF17761 DUF1016 N-terminal domain Vapar_0452 PF01274 Malate synthase Vapar_0453 PF13419 Haloacid dehalogenase-like hydrolase Vapar_0454 PF01614 Bacterial transcriptional regulator Vapar_0454 PF09339 IclR helix-turn-helix domain Vapar_0455 PF00682 HMGL-like Vapar_0456 PF02515 CoA-transferase family III Vapar_0457 PF03466 LysR substrate binding domain Vapar_0457 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_0461 PF00750 tRNA synthetases class I (R) Vapar_0461 PF05746 DALR anticodon binding domain Vapar_0461 PF03485 Arginyl tRNA synthetase N terminal domain Vapar_0463 PF01323 DSBA-like thioredoxin domain Vapar_0463 PF00085 Thioredoxin Vapar_0464 PF03968 OstA-like protein Vapar_0465 PF00005 ABC transporter Vapar_0466 PF04552 Sigma-54, DNA binding domain Vapar_0466 PF04963 Sigma-54 factor, core binding domain Vapar_0466 PF00309 Sigma-54 factor, Activator interacting domain (AID) Vapar_0467 PF13091 PLD-like domain Vapar_0472 PF00512 His Kinase A (phospho-acceptor) domain Vapar_0472 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vapar_0473 PF01170 Putative RNA methylase family UPF0020 Vapar_0473 PF02926 THUMP domain Vapar_0478 PF01645 Conserved region in glutamate synthase Vapar_0479 PF07517 SecA DEAD-like domain Vapar_0479 PF02810 SEC-C motif Vapar_0479 PF07516 SecA Wing and Scaffold domain Vapar_0479 PF01043 SecA preprotein cross-linking domain Vapar_0483 PF02464 Competence-damaged protein Vapar_0484 PF04608 Phosphatidylglycerophosphatase A Vapar_0485 PF07690 Major Facilitator Superfamily Vapar_0487 PF02769 AIR synthase related protein, C-terminal domain Vapar_0487 PF00586 AIR synthase related protein, N-terminal domain Vapar_0488 PF00857 Isochorismatase family Vapar_0489 PF01965 DJ-1/PfpI family Vapar_0489 PF12833 Helix-turn-helix domain Vapar_0490 PF04107 Glutamate-cysteine ligase family 2(GCS2) Vapar_0493 PF04379 ApaG domain Vapar_0494 PF00834 Ribulose-phosphate 3 epimerase family Vapar_0497 PF02735 Ku70/Ku80 beta-barrel domain Vapar_0498 PF04679 ATP dependent DNA ligase C terminal region Vapar_0498 PF01068 ATP dependent DNA ligase domain Vapar_0498 PF13298 DNA polymerase Ligase (LigD) Vapar_0501 PF18011 C-terminal domain found in long catalases Vapar_0501 PF00199 Catalase Vapar_0501 PF06628 Catalase-related immune-responsive Vapar_0508 PF00512 His Kinase A (phospho-acceptor) domain Vapar_0508 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vapar_0510 PF01627 Hpt domain Vapar_0510 PF00672 HAMP domain Vapar_0510 PF00072 Response regulator receiver domain Vapar_0510 PF00512 His Kinase A (phospho-acceptor) domain Vapar_0510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vapar_0515 PF00691 OmpA family Vapar_0515 PF13677 Membrane MotB of proton-channel complex MotA/MotB Vapar_0519 PF00069 Protein kinase domain Vapar_0530 PF17871 AAA lid domain Vapar_0530 PF07724 AAA domain (Cdc48 subfamily) Vapar_0530 PF10431 C-terminal, D2-small domain, of ClpB protein Vapar_0530 PF00004 ATPase family associated with various cellular activities (AAA) Vapar_0531 PF04717 Type VI secretion system, phage-baseplate injector Vapar_0536 PF04717 Type VI secretion system, phage-baseplate injector Vapar_0548 PF05638 Type VI secretion system effector, Hcp Vapar_0555 PF00196 Bacterial regulatory proteins, luxR family Vapar_0555 PF00072 Response regulator receiver domain Vapar_0558 PF00586 AIR synthase related protein, N-terminal domain Vapar_0558 PF02769 AIR synthase related protein, C-terminal domain Vapar_0561 PF00795 Carbon-nitrogen hydrolase Vapar_0563 PF00155 Aminotransferase class I and II Vapar_0563 PF00392 Bacterial regulatory proteins, gntR family Vapar_0571 PF13419 Haloacid dehalogenase-like hydrolase Vapar_0573 PF00425 chorismate binding enzyme Vapar_0573 PF04715 Anthranilate synthase component I, N terminal region Vapar_0575 PF00117 Glutamine amidotransferase class-I Vapar_0576 PF01212 Beta-eliminating lyase Vapar_0577 PF01810 LysE type translocator Vapar_0578 PF02885 Glycosyl transferase family, helical bundle domain Vapar_0578 PF00591 Glycosyl transferase family, a/b domain Vapar_0579 PF00218 Indole-3-glycerol phosphate synthase Vapar_0580 PF03167 Uracil DNA glycosylase superfamily Vapar_0581 PF03144 Elongation factor Tu domain 2 Vapar_0581 PF03143 Elongation factor Tu C-terminal domain Vapar_0581 PF00009 Elongation factor Tu GTP binding domain Vapar_0583 PF00467 KOW motif Vapar_0583 PF02357 Transcription termination factor nusG Vapar_0584 PF03946 Ribosomal protein L11, N-terminal domain Vapar_0584 PF00298 Ribosomal protein L11, RNA binding domain Vapar_0585 PF00687 Ribosomal protein L1p/L10e family Vapar_0586 PF00466 Ribosomal protein L10 Vapar_0587 PF00542 Ribosomal protein L7/L12 C-terminal domain Vapar_0587 PF16320 Ribosomal protein L7/L12 dimerisation domain Vapar_0588 PF00562 RNA polymerase Rpb2, domain 6 Vapar_0588 PF04560 RNA polymerase Rpb2, domain 7 Vapar_0588 PF04565 RNA polymerase Rpb2, domain 3 Vapar_0588 PF10385 RNA polymerase beta subunit external 1 domain Vapar_0588 PF04561 RNA polymerase Rpb2, domain 2 Vapar_0588 PF04563 RNA polymerase beta subunit Vapar_0589 PF05000 RNA polymerase Rpb1, domain 4 Vapar_0589 PF04998 RNA polymerase Rpb1, domain 5 Vapar_0589 PF04983 RNA polymerase Rpb1, domain 3 Vapar_0589 PF00623 RNA polymerase Rpb1, domain 2 Vapar_0589 PF04997 RNA polymerase Rpb1, domain 1 Vapar_0591 PF01189 16S rRNA methyltransferase RsmB/F Vapar_0591 PF01029 NusB family Vapar_0593 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vapar_0593 PF00672 HAMP domain Vapar_0593 PF00989 PAS fold Vapar_0593 PF00512 His Kinase A (phospho-acceptor) domain Vapar_0594 PF00072 Response regulator receiver domain Vapar_0594 PF02954 Bacterial regulatory protein, Fis family Vapar_0594 PF00158 Sigma-54 interaction domain Vapar_0595 PF01527 Transposase Vapar_0596 PF01381 Helix-turn-helix Vapar_0610 PF13609 Gram-negative porin Vapar_0612 PF00135 Carboxylesterase family Vapar_0616 PF01557 Fumarylacetoacetate (FAA) hydrolase family Vapar_0617 PF01042 Endoribonuclease L-PSP Vapar_0618 PF02615 Malate/L-lactate dehydrogenase Vapar_0620 PF00528 Binding-protein-dependent transport system inner membrane component Vapar_0621 PF00005 ABC transporter Vapar_0622 PF09084 NMT1/THI5 like Vapar_0623 PF01494 FAD binding domain Vapar_0625 PF00392 Bacterial regulatory proteins, gntR family Vapar_0625 PF07729 FCD domain Vapar_0626 PF14525 AraC-binding-like domain Vapar_0626 PF12833 Helix-turn-helix domain Vapar_0628 PF00175 Oxidoreductase NAD-binding domain Vapar_0628 PF00111 2Fe-2S iron-sulfur cluster binding domain Vapar_0629 PF12833 Helix-turn-helix domain Vapar_0630 PF00355 Rieske [2Fe-2S] domain Vapar_0632 PF00005 ABC transporter Vapar_0633 PF12399 Branched-chain amino acid ATP-binding cassette transporter Vapar_0633 PF00005 ABC transporter Vapar_0635 PF02653 Branched-chain amino acid transport system / permease component Vapar_0636 PF00848 Ring hydroxylating alpha subunit (catalytic domain) Vapar_0636 PF00355 Rieske [2Fe-2S] domain Vapar_0637 PF00866 Ring hydroxylating beta subunit Vapar_0638 PF00857 Isochorismatase family Vapar_0639 PF12833 Helix-turn-helix domain Vapar_0639 PF14525 AraC-binding-like domain Vapar_0647 PF04199 Putative cyclase Vapar_0652 PF17645 Arylmalonate decarboxylase Vapar_0653 PF00795 Carbon-nitrogen hydrolase Vapar_0654 PF01557 Fumarylacetoacetate (FAA) hydrolase family Vapar_0655 PF07883 Cupin domain Vapar_0656 PF01494 FAD binding domain Vapar_0660 PF03466 LysR substrate binding domain Vapar_0660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_0661 PF02798 Glutathione S-transferase, N-terminal domain Vapar_0662 PF00175 Oxidoreductase NAD-binding domain Vapar_0662 PF00042 Globin Vapar_0662 PF00970 Oxidoreductase FAD-binding domain Vapar_0664 PF05717 IS66 Orf2 like protein Vapar_0665 PF13007 Transposase C of IS166 homeodomain Vapar_0665 PF13005 zinc-finger binding domain of transposase IS66 Vapar_0665 PF03050 Transposase IS66 family Vapar_0665 PF13817 IS66 C-terminal element Vapar_0671 PF00561 alpha/beta hydrolase fold Vapar_0674 PF03466 LysR substrate binding domain Vapar_0674 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_0678 PF12911 N-terminal TM domain of oligopeptide transport permease C Vapar_0678 PF00528 Binding-protein-dependent transport system inner membrane component Vapar_0681 PF01695 IstB-like ATP binding protein Vapar_0686 PF13356 Arm DNA-binding domain Vapar_0686 PF00589 Phage integrase family Vapar_0687 PF00672 HAMP domain Vapar_0687 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Vapar_0687 PF02203 Tar ligand binding domain homologue Vapar_0689 PF00156 Phosphoribosyl transferase domain Vapar_0689 PF01738 Dienelactone hydrolase family Vapar_0691 PF00924 Mechanosensitive ion channel Vapar_0696 PF00115 Cytochrome C and Quinol oxidase polypeptide I Vapar_0697 PF00116 Cytochrome C oxidase subunit II, periplasmic domain Vapar_0697 PF02790 Cytochrome C oxidase subunit II, transmembrane domain Vapar_0699 PF00497 Bacterial extracellular solute-binding proteins, family 3 Vapar_0700 PF13360 PQQ-like domain Vapar_0702 PF00534 Glycosyl transferases group 1 Vapar_0702 PF13439 Glycosyltransferase Family 4 Vapar_0706 PF00571 CBS domain Vapar_0708 PF04945 YHS domain Vapar_0709 PF01425 Amidase Vapar_0710 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_0711 PF03466 LysR substrate binding domain Vapar_0711 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_0712 PF00216 Bacterial DNA-binding protein Vapar_0713 PF03466 LysR substrate binding domain Vapar_0713 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_0715 PF00990 Diguanylate cyclase, GGDEF domain Vapar_0715 PF03707 Bacterial signalling protein N terminal repeat Vapar_0715 PF00563 EAL domain Vapar_0716 PF08448 PAS fold Vapar_0716 PF00563 EAL domain Vapar_0716 PF00990 Diguanylate cyclase, GGDEF domain Vapar_0716 PF13426 PAS domain Vapar_0716 PF05231 MASE1 Vapar_0716 PF08447 PAS fold Vapar_0717 PF00512 His Kinase A (phospho-acceptor) domain Vapar_0717 PF00672 HAMP domain Vapar_0717 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vapar_0718 PF02540 NAD synthase Vapar_0719 PF02253 Phospholipase A1 Vapar_0721 PF13361 UvrD-like helicase C-terminal domain Vapar_0721 PF00580 UvrD/REP helicase N-terminal domain Vapar_0722 PF03547 Membrane transport protein Vapar_0726 PF18074 Primosomal protein N C-terminal domain Vapar_0726 PF00270 DEAD/DEAH box helicase Vapar_0726 PF17764 3′ DNA-binding domain (3′BD) Vapar_0726 PF00271 Helicase conserved C-terminal domain Vapar_0726 PF18319 PriA DNA helicase Cys-rich region (CRR) domain Vapar_0727 PF01208 Uroporphyrinogen decarboxylase (URO-D) Vapar_0728 PF07690 Major Facilitator Superfamily Vapar_0729 PF00578 AhpC/TSA family Vapar_0730 PF02683 Cytochrome C biogenesis protein transmembrane region Vapar_0730 PF11412 Disulphide bond corrector protein DsbC Vapar_0730 PF13098 Thioredoxin-like domain Vapar_0731 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Vapar_0731 PF01411 tRNA synthetases class II (A) Vapar_0731 PF02272 DHHA1 domain Vapar_0732 PF07995 Glucose / Sorbosone dehydrogenase Vapar_0734 PF00107 Zinc-binding dehydrogenase Vapar_0734 PF08240 Alcohol dehydrogenase GroES-like domain Vapar_0735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_0735 PF03466 LysR substrate binding domain Vapar_0736 PF00106 short chain dehydrogenase Vapar_0737 PF02633 Creatinine amidohydrolase Vapar_0738 PF00291 Pyridoxal-phosphate dependent enzyme Vapar_0739 PF01810 LysE type translocator Vapar_0741 PF02567 Phenazine biosynthesis-like protein Vapar_0742 PF13417 Glutathione S-transferase, N-terminal domain Vapar_0742 PF00043 Glutathione S-transferase, C-terminal domain Vapar_0743 PF01810 LysE type translocator Vapar_0745 PF00155 Aminotransferase class I and II Vapar_0746 PF00892 EamA-like transporter family Vapar_0751 PF01266 FAD dependent oxidoreductase Vapar_0752 PF16363 GDP-mannose 4,6 dehydratase Vapar_0753 PF04321 RmlD substrate binding domain Vapar_0754 PF00483 Nucleotidyl transferase Vapar_0755 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase Vapar_0756 PF16363 GDP-mannose 4,6 dehydratase Vapar_0757 PF16363 GDP-mannose 4,6 dehydratase Vapar_0758 PF13439 Glycosyltransferase Family 4 Vapar_0761 PF13439 Glycosyltransferase Family 4 Vapar_0764 PF00005 ABC transporter Vapar_0765 PF01061 ABC-2 type transporter Vapar_0766 PF01050 Mannose-6-phosphate isomerase Vapar_0766 PF00483 Nucleotidyl transferase Vapar_0767 PF00535 Glycosyl transferase family 2 Vapar_0769 PF00535 Glycosyl transferase family 2 Vapar_0770 PF01757 Acyltransferase family Vapar_0772 PF00953 Glycosyl transferase family 4 Vapar_0773 PF00696 Amino acid kinase family Vapar_0774 PF00535 Glycosyl transferase family 2 Vapar_0775 PF00535 Glycosyl transferase family 2 Vapar_0776 PF16363 GDP-mannose 4,6 dehydratase Vapar_0777 PF00440 Bacterial regulatory proteins, tetR family Vapar_0778 PF00199 Catalase Vapar_0778 PF06628 Catalase-related immune-responsive Vapar_0781 PF00892 EamA-like transporter family Vapar_0782 PF02615 Malate/L-lactate dehydrogenase Vapar_0783 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus Vapar_0783 PF08666 SAF domain Vapar_0784 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Vapar_0786 PF03480 Bacterial extracellular solute-binding protein, family 7 Vapar_0787 PF00392 Bacterial regulatory proteins, gntR family Vapar_0787 PF07729 FCD domain Vapar_0790 PF01557 Fumarylacetoacetate (FAA) hydrolase family Vapar_0791 PF07702 UTRA domain Vapar_0791 PF00392 Bacterial regulatory proteins, gntR family Vapar_0792 PF13458 Periplasmic binding protein Vapar_0793 PF02653 Branched-chain amino acid transport system / permease component Vapar_0794 PF02653 Branched-chain amino acid transport system / permease component Vapar_0794 PF11862 Domain of unknown function (DUF3382) Vapar_0795 PF00005 ABC transporter Vapar_0795 PF12399 Branched-chain amino acid ATP-binding cassette transporter Vapar_0796 PF00005 ABC transporter Vapar_0797 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_0798 PF00330 Aconitase family (aconitate hydratase) Vapar_0799 PF00694 Aconitase C-terminal domain Vapar_0801 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_0802 PF02538 Hydantoinase B/oxoprolinase Vapar_0803 PF01968 Hydantoinase/oxoprolinase Vapar_0803 PF05378 Hydantoinase/oxoprolinase N-terminal region Vapar_0807 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_0807 PF03466 LysR substrate binding domain Vapar_0808 PF00106 short chain dehydrogenase Vapar_0810 PF02770 Acyl-CoA dehydrogenase, middle domain Vapar_0810 PF12806 Acetyl-CoA dehydrogenase C-terminal like Vapar_0810 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Vapar_0810 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Vapar_0812 PF00378 Enoyl-CoA hydratase/isomerase Vapar_0812 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Vapar_0812 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Vapar_0813 PF04480 Protein of unknown function (DUF559) Vapar_0814 PF00108 Thiolase, N-terminal domain Vapar_0814 PF02803 Thiolase, C-terminal domain Vapar_0817 PF00106 short chain dehydrogenase Vapar_0819 PF01323 DSBA-like thioredoxin domain Vapar_0820 PF00378 Enoyl-CoA hydratase/isomerase Vapar_0821 PF13458 Periplasmic binding protein Vapar_0822 PF03061 Thioesterase superfamily Vapar_0823 PF00664 ABC transporter transmembrane region Vapar_0823 PF00005 ABC transporter Vapar_0824 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Vapar_0824 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Vapar_0825 PF01425 Amidase Vapar_0826 PF03466 LysR substrate binding domain Vapar_0826 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_0827 PF10415 Fumarase C C-terminus Vapar_0827 PF00206 Lyase Vapar_0828 PF00497 Bacterial extracellular solute-binding proteins, family 3 Vapar_0829 PF00528 Binding-protein-dependent transport system inner membrane component Vapar_0830 PF00528 Binding-protein-dependent transport system inner membrane component Vapar_0831 PF00005 ABC transporter Vapar_0832 PF01156 Inosine-uridine preferring nucleoside hydrolase Vapar_0833 PF03480 Bacterial extracellular solute-binding protein, family 7 Vapar_0834 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Vapar_0835 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component Vapar_0836 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_0837 PF00501 AMP-binding enzyme Vapar_0837 PF13193 AMP-binding enzyme C-terminal domain Vapar_0838 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_0839 PF02515 CoA-transferase family III Vapar_0840 PF00378 Enoyl-CoA hydratase/isomerase Vapar_0841 PF02770 Acyl-CoA dehydrogenase, middle domain Vapar_0841 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Vapar_0841 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Vapar_0842 PF02770 Acyl-CoA dehydrogenase, middle domain Vapar_0842 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Vapar_0842 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Vapar_0843 PF00108 Thiolase, N-terminal domain Vapar_0843 PF02803 Thiolase, C-terminal domain Vapar_0844 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Vapar_0844 PF00378 Enoyl-CoA hydratase/isomerase Vapar_0844 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Vapar_0845 PF03466 LysR substrate binding domain Vapar_0845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_0846 PF04115 Ureidoglycolate lyase Vapar_0848 PF01425 Amidase Vapar_0849 PF00005 ABC transporter Vapar_0849 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Vapar_0850 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Vapar_0850 PF00005 ABC transporter Vapar_0851 PF00528 Binding-protein-dependent transport system inner membrane component Vapar_0851 PF12911 N-terminal TM domain of oligopeptide transport permease C Vapar_0852 PF00528 Binding-protein-dependent transport system inner membrane component Vapar_0853 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Vapar_0854 PF01979 Amidohydrolase family Vapar_0859 PF01435 Peptidase family M48 Vapar_0862 PF17516 ProQ C-terminal domain Vapar_0862 PF04352 ProQ/FINO family Vapar_0863 PF01613 Flavin reductase like domain Vapar_0865 PF00291 Pyridoxal-phosphate dependent enzyme Vapar_0866 PF01047 MarR family Vapar_0868 PF07869 Protein of unknown function (DUF1656) Vapar_0869 PF13533 Biotin-lipoyl like Vapar_0870 PF02321 Outer membrane efflux protein Vapar_0871 PF07690 Major Facilitator Superfamily Vapar_0873 PF00849 RNA pseudouridylate synthase Vapar_0873 PF01479 S4 domain Vapar_0874 PF00753 Metallo-beta-lactamase superfamily Vapar_0874 PF16123 Hydroxyacylglutathione hydrolase C-terminus Vapar_0875 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_0881 PF04185 Phosphoesterase family Vapar_0881 PF05506 Domain of unknown function (DUF756) Vapar_0883 PF01925 Sulfite exporter TauE/SafE Vapar_0886 PF07883 Cupin domain Vapar_0886 PF12833 Helix-turn-helix domain Vapar_0891 PF01695 IstB-like ATP binding protein Vapar_0894 PF04717 Type VI secretion system, phage-baseplate injector Vapar_0896 PF03466 LysR substrate binding domain Vapar_0896 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_0899 PF01678 Diaminopimelate epimerase Vapar_0902 PF02899 Phage integrase, N-terminal SAM-like domain Vapar_0902 PF00589 Phage integrase family Vapar_0903 PF10672 S-adenosylmethionine-dependent methyltransferase Vapar_0903 PF17785 PUA-like domain Vapar_0904 PF02492 CobW/HypB/UreG, nucleotide-binding domain Vapar_0904 PF07683 Cobalamin synthesis protein cobW C-terminal domain Vapar_0906 PF01258 Prokaryotic dksA/traR C4-type zinc finger Vapar_0908 PF00227 Proteasome subunit Vapar_0909 PF00004 ATPase family associated with various cellular activities (AAA) Vapar_0909 PF07724 AAA domain (Cdc48 subfamily) Vapar_0910 PF02381 MraZ protein, putative antitoxin-like Vapar_0911 PF01795 MraW methylase family Vapar_0912 PF04999 Cell division protein FtsL Vapar_0913 PF00905 Penicillin binding protein transpeptidase domain Vapar_0913 PF03717 Penicillin-binding Protein dimerisation domain Vapar_0914 PF02875 Mur ligase family, glutamate ligase domain Vapar_0914 PF08245 Mur ligase middle domain Vapar_0915 PF08245 Mur ligase middle domain Vapar_0915 PF02875 Mur ligase family, glutamate ligase domain Vapar_0915 PF01225 Mur ligase family, catalytic domain Vapar_0916 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 Vapar_0916 PF00953 Glycosyl transferase family 4 Vapar_0917 PF08245 Mur ligase middle domain Vapar_0917 PF02875 Mur ligase family, glutamate ligase domain Vapar_0918 PF01098 Cell cycle protein Vapar_0919 PF04101 Glycosyltransferase family 28 C-terminal domain Vapar_0919 PF03033 Glycosyltransferase family 28 N-terminal domain Vapar_0920 PF02875 Mur ligase family, glutamate ligase domain Vapar_0920 PF08245 Mur ligase middle domain Vapar_0920 PF01225 Mur ligase family, catalytic domain Vapar_0921 PF01820 D-ala D-ala ligase N-terminus Vapar_0921 PF07478 D-ala D-ala ligase C-terminus Vapar_0922 PF03799 Cell division protein FtsQ Vapar_0922 PF08478 POTRA domain, FtsQ-type Vapar_0923 PF02491 SHS2 domain inserted in FTSA Vapar_0924 PF12327 FtsZ family, C-terminal domain Vapar_0924 PF00091 Tubulin/FtsZ family, GTPase domain Vapar_0925 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase Vapar_0928 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_0928 PF03466 LysR substrate binding domain Vapar_0929 PF00464 Serine hydroxymethyltransferase Vapar_0930 PF02075 Crossover junction endodeoxyribonuclease RuvC Vapar_0934 PF00912 Transglycosylase Vapar_0935 PF01488 Shikimate / quinate 5-dehydrogenase Vapar_0935 PF18317 Shikimate 5'-dehydrogenase C-terminal domain Vapar_0935 PF08501 Shikimate dehydrogenase substrate binding domain Vapar_0937 PF17876 Cold shock domain Vapar_0937 PF00575 S1 RNA binding domain Vapar_0937 PF00773 RNB domain Vapar_0937 PF08206 Ribonuclease B OB domain Vapar_0938 PF05728 Uncharacterised protein family (UPF0227) Vapar_0939 PF00072 Response regulator receiver domain Vapar_0939 PF00196 Bacterial regulatory proteins, luxR family Vapar_0941 PF01098 Cell cycle protein Vapar_0942 PF01523 Putative modulator of DNA gyrase Vapar_0944 PF00793 DAHP synthetase I family Vapar_0946 PF01225 Mur ligase family, catalytic domain Vapar_0946 PF02875 Mur ligase family, glutamate ligase domain Vapar_0946 PF08245 Mur ligase middle domain Vapar_0948 PF00578 AhpC/TSA family Vapar_0949 PF00364 Biotin-requiring enzyme Vapar_0950 PF00289 Biotin carboxylase, N-terminal domain Vapar_0950 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Vapar_0950 PF02785 Biotin carboxylase C-terminal domain Vapar_0953 PF00294 pfkB family carbohydrate kinase Vapar_0955 PF00268 Ribonucleotide reductase, small chain Vapar_0956 PF00317 Ribonucleotide reductase, all-alpha domain Vapar_0956 PF02867 Ribonucleotide reductase, barrel domain Vapar_0956 PF03477 ATP cone domain Vapar_0957 PF01510 N-acetylmuramoyl-L-alanine amidase Vapar_0958 PF00158 Sigma-54 interaction domain Vapar_0958 PF00072 Response regulator receiver domain Vapar_0958 PF02954 Bacterial regulatory protein, Fis family Vapar_0959 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vapar_0959 PF00512 His Kinase A (phospho-acceptor) domain Vapar_0962 PF02978 Signal peptide binding domain Vapar_0962 PF02881 SRP54-type protein, helical bundle domain Vapar_0962 PF00448 SRP54-type protein, GTPase domain Vapar_0965 PF00072 Response regulator receiver domain Vapar_0965 PF00158 Sigma-54 interaction domain Vapar_0967 PF00512 His Kinase A (phospho-acceptor) domain Vapar_0967 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vapar_0968 PF04055 Radical SAM superfamily Vapar_0968 PF01938 TRAM domain Vapar_0968 PF00919 Uncharacterized protein family UPF0004 Vapar_0970 PF13533 Biotin-lipoyl like Vapar_0971 PF00873 AcrB/AcrD/AcrF family Vapar_0972 PF00300 Histidine phosphatase superfamily (branch 1) Vapar_0974 PF01171 PP-loop family Vapar_0976 PF00106 short chain dehydrogenase Vapar_0978 PF02668 Taurine catabolism dioxygenase TauD, TfdA family Vapar_0979 PF17263 Family of unknown function (DUF5329) Vapar_0980 PF00459 Inositol monophosphatase family Vapar_0982 PF00480 ROK family Vapar_0983 PF00155 Aminotransferase class I and II Vapar_0983 PF00392 Bacterial regulatory proteins, gntR family Vapar_0985 PF00982 Glycosyltransferase family 20 Vapar_0986 PF00723 Glycosyl hydrolases family 15 Vapar_0987 PF02358 Trehalose-phosphatase Vapar_0988 PF01743 Poly A polymerase head domain Vapar_0988 PF12627 Probable RNA and SrmB- binding site of polymerase A Vapar_0988 PF01966 HD domain Vapar_0990 PF00043 Glutathione S-transferase, C-terminal domain Vapar_0990 PF02798 Glutathione S-transferase, N-terminal domain Vapar_0991 PF02308 MgtC family Vapar_0992 PF14718 Soluble lytic murein transglycosylase L domain Vapar_0992 PF01464 Transglycosylase SLT domain Vapar_0993 PF01812 5-formyltetrahydrofolate cyclo-ligase family Vapar_0994 PF03466 LysR substrate binding domain Vapar_0994 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_0997 PF00027 Cyclic nucleotide-binding domain Vapar_0997 PF13545 Crp-like helix-turn-helix domain Vapar_0999 PF12804 MobA-like NTP transferase domain Vapar_0999 PF00132 Bacterial transferase hexapeptide (six repeats) Vapar_1000 PF01037 Lrp/AsnC ligand binding domain Vapar_1001 PF01380 SIS domain Vapar_1002 PF12728 Helix-turn-helix domain Vapar_1002 PF02661 Fic/DOC family Vapar_1003 PF00793 DAHP synthetase I family Vapar_1009 PF01541 GIY-YIG catalytic domain Vapar_1010 PF00676 Dehydrogenase E1 component Vapar_1010 PF12573 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal Vapar_1011 PF02779 Transketolase, pyrimidine binding domain Vapar_1011 PF02780 Transketolase, C-terminal domain Vapar_1012 PF02817 e3 binding domain Vapar_1012 PF00364 Biotin-requiring enzyme Vapar_1012 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Vapar_1014 PF01077 Nitrite and sulphite reductase 4Fe-4S domain Vapar_1014 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Vapar_1018 PF11760 Cobalamin synthesis G N-terminal Vapar_1018 PF11761 Cobalamin biosynthesis central region Vapar_1018 PF01890 Cobalamin synthesis G C-terminus Vapar_1020 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Vapar_1021 PF01888 CbiD Vapar_1022 PF02570 Precorrin-8X methylmutase Vapar_1024 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Vapar_1026 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_1027 PF00180 Isocitrate/isopropylmalate dehydrogenase Vapar_1028 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_1028 PF03466 LysR substrate binding domain Vapar_1030 PF13406 Transglycosylase SLT domain Vapar_1035 PF00892 EamA-like transporter family Vapar_1036 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_1036 PF03466 LysR substrate binding domain Vapar_1037 PF01225 Mur ligase family, catalytic domain Vapar_1037 PF02875 Mur ligase family, glutamate ligase domain Vapar_1037 PF08245 Mur ligase middle domain Vapar_1039 PF01263 Aldose 1-epimerase Vapar_1040 PF08450 SMP-30/Gluconolactonase/LRE-like region Vapar_1042 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_1042 PF03466 LysR substrate binding domain Vapar_1043 PF00171 Aldehyde dehydrogenase family Vapar_1044 PF13407 Periplasmic binding protein domain Vapar_1045 PF13407 Periplasmic binding protein domain Vapar_1046 PF00005 ABC transporter Vapar_1047 PF02653 Branched-chain amino acid transport system / permease component Vapar_1048 PF00005 ABC transporter Vapar_1049 PF02653 Branched-chain amino acid transport system / permease component Vapar_1050 PF02653 Branched-chain amino acid transport system / permease component Vapar_1051 PF00920 Dehydratase family Vapar_1052 PF00701 Dihydrodipicolinate synthetase family Vapar_1053 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_1053 PF03466 LysR substrate binding domain Vapar_1059 PF02875 Mur ligase family, glutamate ligase domain Vapar_1059 PF08245 Mur ligase middle domain Vapar_1059 PF08443 RimK-like ATP-grasp domain Vapar_1060 PF00664 ABC transporter transmembrane region Vapar_1060 PF00005 ABC transporter Vapar_1062 PF01757 Acyltransferase family Vapar_1063 PF06508 Queuosine biosynthesis protein QueC Vapar_1064 PF06472 ABC transporter transmembrane region 2 Vapar_1064 PF00005 ABC transporter Vapar_1067 PF07690 Major Facilitator Superfamily Vapar_1068 PF05506 Domain of unknown function (DUF756) Vapar_1068 PF04185 Phosphoesterase family Vapar_1071 PF00482 Type II secretion system (T2SS), protein F Vapar_1072 PF00437 Type II/IV secretion system protein Vapar_1073 PF00263 Bacterial type II and III secretion system protein Vapar_1073 PF03958 Bacterial type II/III secretion system short domain Vapar_1078 PF11612 Type II secretion system (T2SS), protein J Vapar_1078 PF07963 Prokaryotic N-terminal methylation motif Vapar_1079 PF02501 Type II secretion system (T2SS), protein I Vapar_1079 PF07963 Prokaryotic N-terminal methylation motif Vapar_1081 PF08334 Type II secretion system (T2SS), protein G Vapar_1081 PF07963 Prokaryotic N-terminal methylation motif Vapar_1083 PF00585 C-terminal regulatory domain of Threonine dehydratase Vapar_1083 PF00291 Pyridoxal-phosphate dependent enzyme Vapar_1085 PF13609 Gram-negative porin Vapar_1086 PF02566 OsmC-like protein Vapar_1087 PF03232 Ubiquinone biosynthesis protein COQ7 Vapar_1088 PF13609 Gram-negative porin Vapar_1089 PF00528 Binding-protein-dependent transport system inner membrane component Vapar_1091 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Vapar_1092 PF12911 N-terminal TM domain of oligopeptide transport permease C Vapar_1092 PF00528 Binding-protein-dependent transport system inner membrane component Vapar_1093 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Vapar_1093 PF00005 ABC transporter Vapar_1094 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Vapar_1094 PF00005 ABC transporter Vapar_1095 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase Vapar_1096 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain Vapar_1096 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain Vapar_1098 PF00528 Binding-protein-dependent transport system inner membrane component Vapar_1099 PF08402 TOBE domain Vapar_1099 PF00005 ABC transporter Vapar_1102 PF00923 Transaldolase/Fructose-6-phosphate aldolase Vapar_1103 PF00342 Phosphoglucose isomerase Vapar_1105 PF04166 Pyridoxal phosphate biosynthetic protein PdxA Vapar_1106 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_1107 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_1107 PF03466 LysR substrate binding domain Vapar_1109 PF00528 Binding-protein-dependent transport system inner membrane component Vapar_1110 PF00528 Binding-protein-dependent transport system inner membrane component Vapar_1111 PF03459 TOBE domain Vapar_1111 PF17912 MalK OB fold domain Vapar_1111 PF00005 ABC transporter Vapar_1112 PF08125 Mannitol dehydrogenase C-terminal domain Vapar_1112 PF01232 Mannitol dehydrogenase Rossmann domain Vapar_1114 PF00923 Transaldolase/Fructose-6-phosphate aldolase Vapar_1115 PF00294 pfkB family carbohydrate kinase Vapar_1116 PF12833 Helix-turn-helix domain Vapar_1116 PF00072 Response regulator receiver domain Vapar_1117 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Vapar_1117 PF00370 FGGY family of carbohydrate kinases, N-terminal domain Vapar_1118 PF00118 TCP-1/cpn60 chaperonin family Vapar_1119 PF00166 Chaperonin 10 Kd subunit Vapar_1120 PF00593 TonB dependent receptor Vapar_1120 PF07715 TonB-dependent Receptor Plug Domain Vapar_1121 PF13091 PLD-like domain Vapar_1122 PF00593 TonB dependent receptor Vapar_1122 PF07715 TonB-dependent Receptor Plug Domain Vapar_1125 PF07715 TonB-dependent Receptor Plug Domain Vapar_1125 PF00593 TonB dependent receptor Vapar_1126 PF02773 S-adenosylmethionine synthetase, C-terminal domain Vapar_1126 PF02772 S-adenosylmethionine synthetase, central domain Vapar_1126 PF00438 S-adenosylmethionine synthetase, N-terminal domain Vapar_1128 PF03279 Bacterial lipid A biosynthesis acyltransferase Vapar_1129 PF00561 alpha/beta hydrolase fold Vapar_1130 PF01926 50S ribosome-binding GTPase Vapar_1131 PF13442 Cytochrome C oxidase, cbb3-type, subunit III Vapar_1132 PF05140 ResB-like family Vapar_1133 PF01578 Cytochrome C assembly protein Vapar_1134 PF00174 Oxidoreductase molybdopterin binding domain Vapar_1135 PF01794 Ferric reductase like transmembrane component Vapar_1136 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Vapar_1136 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain Vapar_1138 PF01491 Frataxin-like domain Vapar_1139 PF17092 Penicillin-binding protein OB-like domain Vapar_1139 PF00912 Transglycosylase Vapar_1139 PF00905 Penicillin binding protein transpeptidase domain Vapar_1144 PF07660 Secretin and TonB N terminus short domain Vapar_1144 PF11741 AMIN domain Vapar_1144 PF00263 Bacterial type II and III secretion system protein Vapar_1144 PF03958 Bacterial type II/III secretion system short domain Vapar_1145 PF01202 Shikimate kinase Vapar_1146 PF01761 3-dehydroquinate synthase Vapar_1147 PF13286 Phosphohydrolase-associated domain Vapar_1147 PF01966 HD domain Vapar_1152 PF01645 Conserved region in glutamate synthase Vapar_1152 PF04898 Glutamate synthase central domain Vapar_1152 PF01493 GXGXG motif Vapar_1152 PF00310 Glutamine amidotransferases class-II Vapar_1153 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Vapar_1153 PF07992 Pyridine nucleotide-disulphide oxidoreductase Vapar_1154 PF00005 ABC transporter Vapar_1155 PF02405 Permease MlaE Vapar_1156 PF02470 MlaD protein Vapar_1157 PF04333 MlaA lipoprotein Vapar_1160 PF00005 ABC transporter Vapar_1161 PF01061 ABC-2 type transporter Vapar_1162 PF01722 BolA-like protein Vapar_1163 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Vapar_1164 PF01634 ATP phosphoribosyltransferase Vapar_1167 PF00155 Aminotransferase class I and II Vapar_1168 PF00475 Imidazoleglycerol-phosphate dehydratase Vapar_1169 PF00117 Glutamine amidotransferase class-I Vapar_1170 PF00977 Histidine biosynthesis protein Vapar_1173 PF00375 Sodium:dicarboxylate symporter family Vapar_1175 PF00977 Histidine biosynthesis protein Vapar_1176 PF01502 Phosphoribosyl-AMP cyclohydrolase Vapar_1177 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase Vapar_1179 PF01230 HIT domain Vapar_1180 PF02416 mttA/Hcf106 family Vapar_1181 PF02416 mttA/Hcf106 family Vapar_1182 PF00902 Sec-independent protein translocase protein (TatC) Vapar_1183 PF17820 PDZ domain Vapar_1183 PF13180 PDZ domain Vapar_1184 PF08946 Osmosensory transporter coiled coil Vapar_1184 PF00083 Sugar (and other) transporter Vapar_1185 PF01784 NIF3 (NGG1p interacting factor 3) Vapar_1186 PF04166 Pyridoxal phosphate biosynthetic protein PdxA Vapar_1187 PF01741 Large-conductance mechanosensitive channel, MscL Vapar_1189 PF02563 Polysaccharide biosynthesis/export protein Vapar_1189 PF10531 SLBB domain Vapar_1190 PF01451 Low molecular weight phosphotyrosine protein phosphatase Vapar_1191 PF02706 Chain length determinant protein Vapar_1191 PF13807 G-rich domain on putative tyrosine kinase Vapar_1191 PF13614 AAA domain Vapar_1192 PF02397 Bacterial sugar transferase Vapar_1194 PF00534 Glycosyl transferases group 1 Vapar_1194 PF13439 Glycosyltransferase Family 4 Vapar_1197 PF06082 Exopolysaccharide biosynthesis protein YbjH Vapar_1200 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal Vapar_1200 PF00355 Rieske [2Fe-2S] domain Vapar_1201 PF00032 Cytochrome b(C-terminal)/b6/petD Vapar_1201 PF00033 Cytochrome b/b6/petB Vapar_1202 PF02167 Cytochrome C1 family Vapar_1203 PF00043 Glutathione S-transferase, C-terminal domain Vapar_1203 PF02798 Glutathione S-transferase, N-terminal domain Vapar_1204 PF04386 Stringent starvation protein B Vapar_1208 PF17768 RecJ OB domain Vapar_1208 PF02272 DHHA1 domain Vapar_1208 PF01368 DHH family Vapar_1210 PF02687 FtsX-like permease family Vapar_1210 PF12704 MacB-like periplasmic core domain Vapar_1211 PF00005 ABC transporter Vapar_1212 PF00574 Clp protease Vapar_1213 PF01042 Endoribonuclease L-PSP Vapar_1214 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Vapar_1214 PF12793 Sugar transport-related sRNA regulator N-term Vapar_1215 PF00528 Binding-protein-dependent transport system inner membrane component Vapar_1216 PF12911 N-terminal TM domain of oligopeptide transport permease C Vapar_1216 PF00528 Binding-protein-dependent transport system inner membrane component Vapar_1217 PF00005 ABC transporter Vapar_1217 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Vapar_1218 PF00005 ABC transporter Vapar_1218 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Vapar_1220 PF01418 Helix-turn-helix domain, rpiR family Vapar_1220 PF01380 SIS domain Vapar_1221 PF07969 Amidohydrolase family Vapar_1222 PF01613 Flavin reductase like domain Vapar_1226 PF00171 Aldehyde dehydrogenase family Vapar_1226 PF01575 MaoC like domain Vapar_1227 PF00005 ABC transporter Vapar_1228 PF12399 Branched-chain amino acid ATP-binding cassette transporter Vapar_1228 PF00005 ABC transporter Vapar_1231 PF00111 2Fe-2S iron-sulfur cluster binding domain Vapar_1231 PF00970 Oxidoreductase FAD-binding domain Vapar_1231 PF00175 Oxidoreductase NAD-binding domain Vapar_1232 PF01883 Iron-sulfur cluster assembly protein Vapar_1233 PF05138 Phenylacetic acid catabolic protein Vapar_1234 PF06243 Phenylacetic acid degradation B Vapar_1235 PF05138 Phenylacetic acid catabolic protein Vapar_1237 PF03061 Thioesterase superfamily Vapar_1238 PF00378 Enoyl-CoA hydratase/isomerase Vapar_1239 PF00132 Bacterial transferase hexapeptide (six repeats) Vapar_1240 PF00440 Bacterial regulatory proteins, tetR family Vapar_1241 PF13519 von Willebrand factor type A domain Vapar_1241 PF07584 Aerotolerance regulator N-terminal Vapar_1242 PF01882 Protein of unknown function DUF58 Vapar_1243 PF17863 AAA lid domain Vapar_1243 PF07726 ATPase family associated with various cellular activities (AAA) Vapar_1244 PF00595 PDZ domain Vapar_1245 PF01026 TatD related DNase Vapar_1249 PF00437 Type II/IV secretion system protein Vapar_1249 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain Vapar_1251 PF01970 Tripartite tricarboxylate transporter TctA family Vapar_1252 PF03466 LysR substrate binding domain Vapar_1252 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_1253 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_1256 PF00106 short chain dehydrogenase Vapar_1258 PF00107 Zinc-binding dehydrogenase Vapar_1258 PF08240 Alcohol dehydrogenase GroES-like domain Vapar_1260 PF02690 Na+/Pi-cotransporter Vapar_1261 PF00149 Calcineurin-like phosphoesterase Vapar_1262 PF00005 ABC transporter Vapar_1262 PF03459 TOBE domain Vapar_1263 PF00528 Binding-protein-dependent transport system inner membrane component Vapar_1264 PF00528 Binding-protein-dependent transport system inner membrane component Vapar_1266 PF00356 Bacterial regulatory proteins, lacI family Vapar_1267 PF01252 Signal peptidase (SPase) II Vapar_1268 PF08264 Anticodon-binding domain of tRNA Vapar_1268 PF00133 tRNA synthetases class I (I, L, M and V) Vapar_1268 PF06827 Zinc finger found in FPG and IleRS Vapar_1269 PF01687 Riboflavin kinase Vapar_1269 PF06574 FAD synthetase Vapar_1271 PF00378 Enoyl-CoA hydratase/isomerase Vapar_1273 PF02770 Acyl-CoA dehydrogenase, middle domain Vapar_1273 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Vapar_1273 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Vapar_1274 PF02770 Acyl-CoA dehydrogenase, middle domain Vapar_1274 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Vapar_1274 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Vapar_1275 PF00551 Formyl transferase Vapar_1279 PF01029 NusB family Vapar_1279 PF01189 16S rRNA methyltransferase RsmB/F Vapar_1281 PF00471 Ribosomal protein L33 Vapar_1282 PF00830 Ribosomal L28 family Vapar_1283 PF07992 Pyridine nucleotide-disulphide oxidoreductase Vapar_1284 PF13545 Crp-like helix-turn-helix domain Vapar_1284 PF00027 Cyclic nucleotide-binding domain Vapar_1285 PF09397 Ftsk gamma domain Vapar_1285 PF01580 FtsK/SpoIIIE family Vapar_1285 PF17854 FtsK alpha domain Vapar_1285 PF13491 4TM region of DNA translocase FtsK/SpoIIIE Vapar_1286 PF03548 Outer membrane lipoprotein carrier protein LolA Vapar_1287 PF12002 MgsA AAA+ ATPase C terminal Vapar_1287 PF16193 AAA C-terminal domain Vapar_1287 PF00004 ATPase family associated with various cellular activities (AAA) Vapar_1288 PF02653 Branched-chain amino acid transport system / permease component Vapar_1289 PF11862 Domain of unknown function (DUF3382) Vapar_1289 PF02653 Branched-chain amino acid transport system / permease component Vapar_1290 PF12399 Branched-chain amino acid ATP-binding cassette transporter Vapar_1290 PF00005 ABC transporter Vapar_1291 PF00005 ABC transporter Vapar_1292 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_1293 PF00111 2Fe-2S iron-sulfur cluster binding domain Vapar_1293 PF00970 Oxidoreductase FAD-binding domain Vapar_1293 PF00175 Oxidoreductase NAD-binding domain Vapar_1296 PF00291 Pyridoxal-phosphate dependent enzyme Vapar_1297 PF09297 NADH pyrophosphatase zinc ribbon domain Vapar_1297 PF00293 NUDIX domain Vapar_1297 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain Vapar_1298 PF01206 Sulfurtransferase TusA Vapar_1299 PF00483 Nucleotidyl transferase Vapar_1300 PF08264 Anticodon-binding domain of tRNA Vapar_1300 PF10458 Valyl tRNA synthetase tRNA binding arm Vapar_1300 PF00133 tRNA synthetases class I (I, L, M and V) Vapar_1301 PF03883 Peroxide stress protein YaaA Vapar_1303 PF08386 TAP-like protein Vapar_1303 PF00561 alpha/beta hydrolase fold Vapar_1304 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term Vapar_1304 PF14489 QueF-like protein Vapar_1305 PF00106 short chain dehydrogenase Vapar_1307 PF03466 LysR substrate binding domain Vapar_1307 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_1308 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Vapar_1308 PF13378 Enolase C-terminal domain-like Vapar_1309 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_1310 PF17645 Arylmalonate decarboxylase Vapar_1312 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Vapar_1312 PF02770 Acyl-CoA dehydrogenase, middle domain Vapar_1312 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Vapar_1314 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Vapar_1314 PF02770 Acyl-CoA dehydrogenase, middle domain Vapar_1314 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Vapar_1315 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_1316 PF00501 AMP-binding enzyme Vapar_1316 PF13193 AMP-binding enzyme C-terminal domain Vapar_1323 PF11798 IMS family HHH motif Vapar_1323 PF00817 impB/mucB/samB family Vapar_1323 PF11799 impB/mucB/samB family C-terminal domain Vapar_1330 PF00083 Sugar (and other) transporter Vapar_1331 PF01070 FMN-dependent dehydrogenase Vapar_1332 PF03466 LysR substrate binding domain Vapar_1332 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_1335 PF02560 Cyanate lyase C-terminal domain Vapar_1336 PF00106 short chain dehydrogenase Vapar_1337 PF00392 Bacterial regulatory proteins, gntR family Vapar_1337 PF00155 Aminotransferase class I and II Vapar_1338 PF00155 Aminotransferase class I and II Vapar_1341 PF07690 Major Facilitator Superfamily Vapar_1342 PF00392 Bacterial regulatory proteins, gntR family Vapar_1342 PF07729 FCD domain Vapar_1343 PF00912 Transglycosylase Vapar_1343 PF00905 Penicillin binding protein transpeptidase domain Vapar_1345 PF01810 LysE type translocator Vapar_1349 PF00581 Rhodanese-like domain Vapar_1354 PF01661 Macro domain Vapar_1361 PF00206 Lyase Vapar_1361 PF14698 Argininosuccinate lyase C-terminal Vapar_1362 PF07694 5TMR of 5TMR-LYT Vapar_1362 PF06580 Histidine kinase Vapar_1363 PF04397 LytTr DNA-binding domain Vapar_1363 PF00072 Response regulator receiver domain Vapar_1364 PF01594 AI-2E family transporter Vapar_1370 PF03466 LysR substrate binding domain Vapar_1370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_1371 PF07690 Major Facilitator Superfamily Vapar_1373 PF00311 Phosphoenolpyruvate carboxylase Vapar_1374 PF03900 Porphobilinogen deaminase, C-terminal domain Vapar_1374 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain Vapar_1378 PF12111 Polyribonucleotide phosphorylase C terminal Vapar_1378 PF10150 Ribonuclease E/G family Vapar_1378 PF00575 S1 RNA binding domain Vapar_1379 PF00849 RNA pseudouridylate synthase Vapar_1379 PF01479 S4 domain Vapar_1382 PF06965 Na+/H+ antiporter 1 Vapar_1382 PF01343 Peptidase family S49 Vapar_1383 PF07690 Major Facilitator Superfamily Vapar_1384 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Vapar_1385 PF02545 Maf-like protein Vapar_1386 PF02620 Large ribosomal RNA subunit accumulation protein YceD Vapar_1387 PF01783 Ribosomal L32p protein family Vapar_1388 PF02504 Fatty acid synthesis protein Vapar_1389 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal Vapar_1389 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Vapar_1390 PF00698 Acyl transferase domain Vapar_1392 PF00550 Phosphopantetheine attachment site Vapar_1393 PF02801 Beta-ketoacyl synthase, C-terminal domain Vapar_1393 PF00109 Beta-ketoacyl synthase, N-terminal domain Vapar_1395 PF08281 Sigma-70, region 4 Vapar_1395 PF04542 Sigma-70 region 2 Vapar_1398 PF13180 PDZ domain Vapar_1398 PF17820 PDZ domain Vapar_1399 PF00009 Elongation factor Tu GTP binding domain Vapar_1399 PF03144 Elongation factor Tu domain 2 Vapar_1399 PF06421 GTP-binding protein LepA C-terminus Vapar_1399 PF00679 Elongation factor G C-terminus Vapar_1400 PF10502 Signal peptidase, peptidase S26 Vapar_1402 PF14622 Ribonuclease-III-like Vapar_1402 PF00035 Double-stranded RNA binding motif Vapar_1403 PF07650 KH domain Vapar_1403 PF01926 50S ribosome-binding GTPase Vapar_1404 PF11967 Recombination protein O N terminal Vapar_1404 PF02565 Recombination protein O C terminal Vapar_1405 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ Vapar_1406 PF01648 4'-phosphopantetheinyl transferase superfamily Vapar_1407 PF00933 Glycosyl hydrolase family 3 N terminal domain Vapar_1408 PF01863 Protein of unknown function DUF45 Vapar_1409 PF00012 Hsp70 protein Vapar_1410 PF01336 OB-fold nucleic acid binding domain Vapar_1410 PF00152 tRNA synthetases class II (D, K and N) Vapar_1412 PF02325 YGGT family Vapar_1413 PF01039 Carboxyl transferase domain Vapar_1413 PF17848 Acetyl-coA carboxylase zinc finger domain Vapar_1414 PF00290 Tryptophan synthase alpha chain Vapar_1415 PF00291 Pyridoxal-phosphate dependent enzyme Vapar_1416 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase Vapar_1417 PF01416 tRNA pseudouridine synthase Vapar_1419 PF01118 Semialdehyde dehydrogenase, NAD binding domain Vapar_1419 PF02774 Semialdehyde dehydrogenase, dimerisation domain Vapar_1420 PF00180 Isocitrate/isopropylmalate dehydrogenase Vapar_1421 PF00694 Aconitase C-terminal domain Vapar_1422 PF00330 Aconitase family (aconitate hydratase) Vapar_1423 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_1423 PF03466 LysR substrate binding domain Vapar_1425 PF00285 Citrate synthase, C-terminal domain Vapar_1426 PF03937 Flavinator of succinate dehydrogenase Vapar_1427 PF13085 2Fe-2S iron-sulfur cluster binding domain Vapar_1428 PF02910 Fumarate reductase flavoprotein C-term Vapar_1428 PF00890 FAD binding domain Vapar_1431 PF07702 UTRA domain Vapar_1431 PF00392 Bacterial regulatory proteins, gntR family Vapar_1432 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain Vapar_1432 PF00056 lactate/malate dehydrogenase, NAD binding domain Vapar_1436 PF06434 Aconitate hydratase 2 N-terminus Vapar_1436 PF11791 Aconitate B N-terminal domain Vapar_1436 PF00330 Aconitase family (aconitate hydratase) Vapar_1437 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Vapar_1437 PF09317 Domain of unknown function (DUF1974) Vapar_1437 PF02770 Acyl-CoA dehydrogenase, middle domain Vapar_1437 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Vapar_1440 PF00694 Aconitase C-terminal domain Vapar_1440 PF00330 Aconitase family (aconitate hydratase) Vapar_1443 PF02421 Ferrous iron transport protein B Vapar_1443 PF07664 Ferrous iron transport protein B C terminus Vapar_1443 PF07670 Nucleoside recognition Vapar_1445 PF01494 FAD binding domain Vapar_1447 PF03301 Tryptophan 2,3-dioxygenase Vapar_1448 PF00266 Aminotransferase class-V Vapar_1449 PF04199 Putative cyclase Vapar_1451 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Vapar_1451 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Vapar_1452 PF00202 Aminotransferase class-III Vapar_1454 PF01649 Ribosomal protein S20 Vapar_1455 PF03023 Lipid II flippase MurJ Vapar_1456 PF13369 Transglutaminase-like superfamily Vapar_1458 PF03795 YCII-related domain Vapar_1459 PF03795 YCII-related domain Vapar_1460 PF08281 Sigma-70, region 4 Vapar_1460 PF04542 Sigma-70 region 2 Vapar_1461 PF02311 AraC-like ligand binding domain Vapar_1461 PF12833 Helix-turn-helix domain Vapar_1465 PF00586 AIR synthase related protein, N-terminal domain Vapar_1465 PF02769 AIR synthase related protein, C-terminal domain Vapar_1466 PF00308 Bacterial dnaA protein Vapar_1467 PF01743 Poly A polymerase head domain Vapar_1467 PF12627 Probable RNA and SrmB- binding site of polymerase A Vapar_1467 PF12626 Polymerase A arginine-rich C-terminus Vapar_1468 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) Vapar_1469 PF01865 Protein of unknown function DUF47 Vapar_1470 PF01384 Phosphate transporter family Vapar_1473 PF00886 Ribosomal protein S16 Vapar_1474 PF01782 RimM N-terminal domain Vapar_1474 PF05239 PRC-barrel domain Vapar_1475 PF01746 tRNA (Guanine-1)-methyltransferase Vapar_1476 PF01245 Ribosomal protein L19 Vapar_1477 PF00293 NUDIX domain Vapar_1478 PF17113 Regulatory signalling modulator protein AmpE Vapar_1478 PF03186 CobD/Cbib protein Vapar_1479 PF00155 Aminotransferase class I and II Vapar_1480 PF03193 RsgA GTPase Vapar_1481 PF01329 Pterin 4 alpha carbinolamine dehydratase Vapar_1482 PF01435 Peptidase family M48 Vapar_1483 PF00929 Exonuclease Vapar_1484 PF00271 Helicase conserved C-terminal domain Vapar_1484 PF00270 DEAD/DEAH box helicase Vapar_1485 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Vapar_1485 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus Vapar_1486 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Vapar_1486 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain Vapar_1486 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Vapar_1488 PF00109 Beta-ketoacyl synthase, N-terminal domain Vapar_1488 PF08240 Alcohol dehydrogenase GroES-like domain Vapar_1488 PF00550 Phosphopantetheine attachment site Vapar_1488 PF08659 KR domain Vapar_1488 PF00107 Zinc-binding dehydrogenase Vapar_1488 PF16197 Ketoacyl-synthetase C-terminal extension Vapar_1488 PF02801 Beta-ketoacyl synthase, C-terminal domain Vapar_1488 PF14765 Polyketide synthase dehydratase Vapar_1488 PF00698 Acyl transferase domain Vapar_1492 PF00111 2Fe-2S iron-sulfur cluster binding domain Vapar_1492 PF00175 Oxidoreductase NAD-binding domain Vapar_1493 PF00848 Ring hydroxylating alpha subunit (catalytic domain) Vapar_1493 PF00355 Rieske [2Fe-2S] domain Vapar_1495 PF13193 AMP-binding enzyme C-terminal domain Vapar_1495 PF00501 AMP-binding enzyme Vapar_1498 PF04199 Putative cyclase Vapar_1500 PF13458 Periplasmic binding protein Vapar_1501 PF13458 Periplasmic binding protein Vapar_1502 PF00848 Ring hydroxylating alpha subunit (catalytic domain) Vapar_1502 PF00355 Rieske [2Fe-2S] domain Vapar_1505 PF02653 Branched-chain amino acid transport system / permease component Vapar_1506 PF00005 ABC transporter Vapar_1506 PF12399 Branched-chain amino acid ATP-binding cassette transporter Vapar_1507 PF00005 ABC transporter Vapar_1508 PF13193 AMP-binding enzyme C-terminal domain Vapar_1508 PF00501 AMP-binding enzyme Vapar_1510 PF00106 short chain dehydrogenase Vapar_1515 PF00106 short chain dehydrogenase Vapar_1519 PF00263 Bacterial type II and III secretion system protein Vapar_1519 PF13629 Pilus formation protein N terminal region Vapar_1519 PF04972 BON domain Vapar_1528 PF00437 Type II/IV secretion system protein Vapar_1531 PF00196 Bacterial regulatory proteins, luxR family Vapar_1531 PF00072 Response regulator receiver domain Vapar_1533 PF07859 alpha/beta hydrolase fold Vapar_1534 PF00478 IMP dehydrogenase / GMP reductase domain Vapar_1535 PF00127 Copper binding proteins, plastocyanin/azurin family Vapar_1536 PF00580 UvrD/REP helicase N-terminal domain Vapar_1536 PF13361 UvrD-like helicase C-terminal domain Vapar_1540 PF01636 Phosphotransferase enzyme family Vapar_1542 PF01367 5'-3' exonuclease, C-terminal SAM fold Vapar_1542 PF00476 DNA polymerase family A Vapar_1542 PF01612 3'-5' exonuclease Vapar_1542 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain Vapar_1543 PF01546 Peptidase family M20/M25/M40 Vapar_1543 PF07687 Peptidase dimerisation domain Vapar_1544 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_1544 PF03466 LysR substrate binding domain Vapar_1545 PF01266 FAD dependent oxidoreductase Vapar_1546 PF00497 Bacterial extracellular solute-binding proteins, family 3 Vapar_1548 PF01738 Dienelactone hydrolase family Vapar_1551 PF07969 Amidohydrolase family Vapar_1552 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Vapar_1552 PF00005 ABC transporter Vapar_1553 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Vapar_1553 PF00005 ABC transporter Vapar_1554 PF00528 Binding-protein-dependent transport system inner membrane component Vapar_1555 PF00528 Binding-protein-dependent transport system inner membrane component Vapar_1556 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Vapar_1557 PF07364 Metallopeptidase family M81 Vapar_1557 PF07171 MlrC C-terminus Vapar_1558 PF01266 FAD dependent oxidoreductase Vapar_1559 PF01381 Helix-turn-helix Vapar_1559 PF07883 Cupin domain Vapar_1560 PF01546 Peptidase family M20/M25/M40 Vapar_1560 PF07687 Peptidase dimerisation domain Vapar_1561 PF11737 Protein of unknown function (DUF3300) Vapar_1564 PF00005 ABC transporter Vapar_1566 PF00581 Rhodanese-like domain Vapar_1569 PF02609 Exonuclease VII small subunit Vapar_1570 PF00348 Polyprenyl synthetase Vapar_1571 PF02779 Transketolase, pyrimidine binding domain Vapar_1571 PF13292 1-deoxy-D-xylulose-5-phosphate synthase Vapar_1571 PF02780 Transketolase, C-terminal domain Vapar_1572 PF03480 Bacterial extracellular solute-binding protein, family 7 Vapar_1573 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Vapar_1575 PF03781 Sulfatase-modifying factor enzyme 1 Vapar_1575 PF12867 DinB superfamily Vapar_1576 PF07690 Major Facilitator Superfamily Vapar_1577 PF12728 Helix-turn-helix domain Vapar_1577 PF12727 PBP superfamily domain Vapar_1578 PF00202 Aminotransferase class-III Vapar_1579 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_1579 PF03466 LysR substrate binding domain Vapar_1580 PF00392 Bacterial regulatory proteins, gntR family Vapar_1580 PF07702 UTRA domain Vapar_1582 PF02653 Branched-chain amino acid transport system / permease component Vapar_1584 PF00005 ABC transporter Vapar_1584 PF12399 Branched-chain amino acid ATP-binding cassette transporter Vapar_1585 PF00005 ABC transporter Vapar_1586 PF01546 Peptidase family M20/M25/M40 Vapar_1586 PF07687 Peptidase dimerisation domain Vapar_1587 PF07364 Metallopeptidase family M81 Vapar_1587 PF07171 MlrC C-terminus Vapar_1588 PF00528 Binding-protein-dependent transport system inner membrane component Vapar_1589 PF00005 ABC transporter Vapar_1590 PF12849 PBP superfamily domain Vapar_1593 PF00111 2Fe-2S iron-sulfur cluster binding domain Vapar_1593 PF01799 [2Fe-2S] binding domain Vapar_1594 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase Vapar_1594 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Vapar_1596 PF00004 ATPase family associated with various cellular activities (AAA) Vapar_1596 PF05362 Lon protease (S16) C-terminal proteolytic domain Vapar_1596 PF02190 ATP-dependent protease La (LON) substrate-binding domain Vapar_1599 PF02625 XdhC and CoxI family Vapar_1599 PF13478 XdhC Rossmann domain Vapar_1600 PF03334 Na+/H+ antiporter subunit Vapar_1601 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) Vapar_1603 PF00361 Proton-conducting membrane transporter Vapar_1604 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L Vapar_1605 PF00361 Proton-conducting membrane transporter Vapar_1605 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter Vapar_1605 PF13244 Domain of unknown function (DUF4040) Vapar_1605 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Vapar_1606 PF02537 CrcB-like protein, Camphor Resistance (CrcB) Vapar_1607 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Vapar_1609 PF03480 Bacterial extracellular solute-binding protein, family 7 Vapar_1611 PF18073 Rubredoxin metal binding domain Vapar_1613 PF00216 Bacterial DNA-binding protein Vapar_1614 PF00575 S1 RNA binding domain Vapar_1615 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Vapar_1616 PF02153 Prephenate dehydrogenase Vapar_1617 PF00800 Prephenate dehydratase Vapar_1617 PF01842 ACT domain Vapar_1617 PF01817 Chorismate mutase type II Vapar_1618 PF00266 Aminotransferase class-V Vapar_1620 PF03989 DNA gyrase C-terminal domain, beta-propeller Vapar_1620 PF00521 DNA gyrase/topoisomerase IV, subunit A Vapar_1621 PF00691 OmpA family Vapar_1623 PF13419 Haloacid dehalogenase-like hydrolase Vapar_1624 PF13847 Methyltransferase domain Vapar_1624 PF10119 Predicted methyltransferase regulatory domain Vapar_1626 PF01479 S4 domain Vapar_1626 PF00849 RNA pseudouridylate synthase Vapar_1631 PF02464 Competence-damaged protein Vapar_1631 PF18146 Damage-inducible protein CinA KH domain Vapar_1631 PF00994 Probable molybdopterin binding domain Vapar_1634 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vapar_1634 PF00512 His Kinase A (phospho-acceptor) domain Vapar_1634 PF00989 PAS fold Vapar_1635 PF00158 Sigma-54 interaction domain Vapar_1635 PF02954 Bacterial regulatory protein, Fis family Vapar_1635 PF00072 Response regulator receiver domain Vapar_1637 PF03372 Endonuclease/Exonuclease/phosphatase family Vapar_1638 PF00106 short chain dehydrogenase Vapar_1641 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_1642 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_1642 PF03466 LysR substrate binding domain Vapar_1643 PF03466 LysR substrate binding domain Vapar_1643 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_1644 PF13378 Enolase C-terminal domain-like Vapar_1645 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_1647 PF00106 short chain dehydrogenase Vapar_1648 PF00440 Bacterial regulatory proteins, tetR family Vapar_1649 PF01266 FAD dependent oxidoreductase Vapar_1651 PF00171 Aldehyde dehydrogenase family Vapar_1655 PF01545 Cation efflux family Vapar_1655 PF16916 Dimerisation domain of Zinc Transporter Vapar_1657 PF06745 KaiC Vapar_1658 PF00989 PAS fold Vapar_1658 PF16736 Single Cache-like Vapar_1658 PF00512 His Kinase A (phospho-acceptor) domain Vapar_1658 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vapar_1659 PF03706 Lysylphosphatidylglycerol synthase TM region Vapar_1660 PF01068 ATP dependent DNA ligase domain Vapar_1660 PF04679 ATP dependent DNA ligase C terminal region Vapar_1660 PF13298 DNA polymerase Ligase (LigD) Vapar_1663 PF00186 Dihydrofolate reductase Vapar_1664 PF00303 Thymidylate synthase Vapar_1665 PF02979 Nitrile hydratase, alpha chain Vapar_1668 PF01565 FAD binding domain Vapar_1668 PF02913 FAD linked oxidases, C-terminal domain Vapar_1670 PF03631 Virulence factor BrkB Vapar_1672 PF00085 Thioredoxin Vapar_1673 PF13460 NAD(P)H-binding Vapar_1674 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_1674 PF03466 LysR substrate binding domain Vapar_1676 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_1677 PF00561 alpha/beta hydrolase fold Vapar_1677 PF08386 TAP-like protein Vapar_1678 PF01053 Cys/Met metabolism PLP-dependent enzyme Vapar_1681 PF00962 Adenosine/AMP deaminase Vapar_1682 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_1682 PF03466 LysR substrate binding domain Vapar_1686 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_1687 PF00355 Rieske [2Fe-2S] domain Vapar_1690 PF08241 Methyltransferase domain Vapar_1693 PF04055 Radical SAM superfamily Vapar_1694 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase Vapar_1694 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain Vapar_1698 PF04994 TfoX C-terminal domain Vapar_1698 PF04993 TfoX N-terminal domain Vapar_1699 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Vapar_1701 PF00756 Putative esterase Vapar_1702 PF00561 alpha/beta hydrolase fold Vapar_1703 PF00107 Zinc-binding dehydrogenase Vapar_1703 PF08240 Alcohol dehydrogenase GroES-like domain Vapar_1704 PF02798 Glutathione S-transferase, N-terminal domain Vapar_1706 PF00355 Rieske [2Fe-2S] domain Vapar_1706 PF00111 2Fe-2S iron-sulfur cluster binding domain Vapar_1707 PF01220 Dehydroquinase class II Vapar_1708 PF04293 SpoVR like protein Vapar_1709 PF04285 Protein of unknown function (DUF444) Vapar_1710 PF08298 PrkA AAA domain Vapar_1710 PF06798 PrkA serine protein kinase C-terminal domain Vapar_1711 PF00226 DnaJ domain Vapar_1711 PF01556 DnaJ C terminal domain Vapar_1711 PF00684 DnaJ central domain Vapar_1712 PF00012 Hsp70 protein Vapar_1713 PF01025 GrpE Vapar_1714 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Vapar_1716 PF02666 Phosphatidylserine decarboxylase Vapar_1717 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_1718 PF10282 Lactonase, 7-bladed beta-propeller Vapar_1721 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus Vapar_1721 PF08666 SAF domain Vapar_1722 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Vapar_1724 PF03480 Bacterial extracellular solute-binding protein, family 7 Vapar_1725 PF08450 SMP-30/Gluconolactonase/LRE-like region Vapar_1726 PF01370 NAD dependent epimerase/dehydratase family Vapar_1727 PF07729 FCD domain Vapar_1727 PF00392 Bacterial regulatory proteins, gntR family Vapar_1728 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_1729 PF00701 Dihydrodipicolinate synthetase family Vapar_1731 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Vapar_1731 PF13378 Enolase C-terminal domain-like Vapar_1732 PF00171 Aldehyde dehydrogenase family Vapar_1734 PF03466 LysR substrate binding domain Vapar_1734 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_1735 PF00528 Binding-protein-dependent transport system inner membrane component Vapar_1740 PF00005 ABC transporter Vapar_1741 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Vapar_1742 PF00440 Bacterial regulatory proteins, tetR family Vapar_1743 PF13091 PLD-like domain Vapar_1743 PF13396 Phospholipase_D-nuclease N-terminal Vapar_1744 PF13417 Glutathione S-transferase, N-terminal domain Vapar_1745 PF01717 Cobalamin-independent synthase, Catalytic domain Vapar_1746 PF07729 FCD domain Vapar_1746 PF00392 Bacterial regulatory proteins, gntR family Vapar_1747 PF13458 Periplasmic binding protein Vapar_1750 PF00005 ABC transporter Vapar_1750 PF12399 Branched-chain amino acid ATP-binding cassette transporter Vapar_1751 PF00005 ABC transporter Vapar_1752 PF07519 Tannase and feruloyl esterase Vapar_1755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_1755 PF03466 LysR substrate binding domain Vapar_1756 PF00682 HMGL-like Vapar_1757 PF02515 CoA-transferase family III Vapar_1758 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_1759 PF00893 Small Multidrug Resistance protein Vapar_1761 PF07690 Major Facilitator Superfamily Vapar_1762 PF04546 Sigma-70, non-essential region Vapar_1762 PF04542 Sigma-70 region 2 Vapar_1762 PF04545 Sigma-70, region 4 Vapar_1762 PF03979 Sigma-70 factor, region 1.1 Vapar_1762 PF00140 Sigma-70 factor, region 1.2 Vapar_1762 PF04539 Sigma-70 region 3 Vapar_1763 PF01807 CHC2 zinc finger Vapar_1763 PF08275 DNA primase catalytic core, N-terminal domain Vapar_1763 PF13662 Toprim domain Vapar_1763 PF10410 DnaB-helicase binding domain of primase Vapar_1763 PF08278 DNA primase DnaG DnaB-binding Vapar_1764 PF03631 Virulence factor BrkB Vapar_1765 PF00106 short chain dehydrogenase Vapar_1766 PF09361 Phasin protein Vapar_1768 PF00850 Histone deacetylase domain Vapar_1769 PF03061 Thioesterase superfamily Vapar_1771 PF05532 CsbD-like Vapar_1772 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain Vapar_1772 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family Vapar_1774 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Vapar_1774 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Vapar_1775 PF02646 RmuC family Vapar_1777 PF03641 Possible lysine decarboxylase Vapar_1778 PF00378 Enoyl-CoA hydratase/isomerase Vapar_1779 PF09285 Elongation factor P, C-terminal Vapar_1779 PF01132 Elongation factor P (EF-P) OB domain Vapar_1779 PF08207 Elongation factor P (EF-P) KOW-like domain Vapar_1783 PF01541 GIY-YIG catalytic domain Vapar_1783 PF02151 UvrB/uvrC motif Vapar_1783 PF08459 UvrC Helix-hairpin-helix N-terminal Vapar_1784 PF01066 CDP-alcohol phosphatidyltransferase Vapar_1786 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_1786 PF03466 LysR substrate binding domain Vapar_1787 PF00561 alpha/beta hydrolase fold Vapar_1788 PF00180 Isocitrate/isopropylmalate dehydrogenase Vapar_1789 PF00216 Bacterial DNA-binding protein Vapar_1796 PF00109 Beta-ketoacyl synthase, N-terminal domain Vapar_1796 PF00107 Zinc-binding dehydrogenase Vapar_1796 PF00698 Acyl transferase domain Vapar_1796 PF02801 Beta-ketoacyl synthase, C-terminal domain Vapar_1796 PF16197 Ketoacyl-synthetase C-terminal extension Vapar_1796 PF08659 KR domain Vapar_1796 PF00550 Phosphopantetheine attachment site Vapar_1796 PF14765 Polyketide synthase dehydratase Vapar_1796 PF08240 Alcohol dehydrogenase GroES-like domain Vapar_1797 PF01975 Survival protein SurE Vapar_1799 PF01476 LysM domain Vapar_1799 PF01551 Peptidase family M23 Vapar_1800 PF04545 Sigma-70, region 4 Vapar_1800 PF00140 Sigma-70 factor, region 1.2 Vapar_1800 PF04542 Sigma-70 region 2 Vapar_1800 PF04539 Sigma-70 region 3 Vapar_1801 PF05958 tRNA (Uracil-5-)-methyltransferase Vapar_1802 PF01027 Inhibitor of apoptosis-promoting Bax1 Vapar_1803 PF03928 Haem-degrading Vapar_1805 PF02472 Biopolymer transport protein ExbD/TolR Vapar_1806 PF01618 MotA/TolQ/ExbB proton channel family Vapar_1808 PF00593 TonB dependent receptor Vapar_1808 PF07715 TonB-dependent Receptor Plug Domain Vapar_1809 PF13640 2OG-Fe(II) oxygenase superfamily Vapar_1809 PF18331 PKHD-type hydroxylase C-terminal domain Vapar_1812 PF00210 Ferritin-like domain Vapar_1813 PF00578 AhpC/TSA family Vapar_1813 PF10417 C-terminal domain of 1-Cys peroxiredoxin Vapar_1814 PF13192 Thioredoxin domain Vapar_1814 PF07992 Pyridine nucleotide-disulphide oxidoreductase Vapar_1815 PF03618 Kinase/pyrophosphorylase Vapar_1816 PF02896 PEP-utilising enzyme, TIM barrel domain Vapar_1816 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain Vapar_1816 PF00391 PEP-utilising enzyme, mobile domain Vapar_1818 PF01250 Ribosomal protein S6 Vapar_1820 PF01084 Ribosomal protein S18 Vapar_1821 PF03948 Ribosomal protein L9, C-terminal domain Vapar_1821 PF01281 Ribosomal protein L9, N-terminal domain Vapar_1822 PF00772 DnaB-like helicase N terminal domain Vapar_1822 PF03796 DnaB-like helicase C terminal domain Vapar_1825 PF01878 EVE domain Vapar_1827 PF02562 PhoH-like protein Vapar_1827 PF13638 PIN domain Vapar_1828 PF00578 AhpC/TSA family Vapar_1830 PF00155 Aminotransferase class I and II Vapar_1831 PF00742 Homoserine dehydrogenase Vapar_1831 PF01842 ACT domain Vapar_1831 PF03447 Homoserine dehydrogenase, NAD binding domain Vapar_1832 PF00291 Pyridoxal-phosphate dependent enzyme Vapar_1832 PF14821 Threonine synthase N terminus Vapar_1833 PF03205 Molybdopterin guanine dinucleotide synthesis protein B Vapar_1834 PF03454 MoeA C-terminal region (domain IV) Vapar_1834 PF03453 MoeA N-terminal region (domain I and II) Vapar_1834 PF00994 Probable molybdopterin binding domain Vapar_1835 PF02597 ThiS family Vapar_1836 PF00701 Dihydrodipicolinate synthetase family Vapar_1837 PF02391 MoaE protein Vapar_1838 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_1839 PF00004 ATPase family associated with various cellular activities (AAA) Vapar_1839 PF10431 C-terminal, D2-small domain, of ClpB protein Vapar_1839 PF02861 Clp amino terminal domain, pathogenicity island component Vapar_1839 PF17871 AAA lid domain Vapar_1839 PF07724 AAA domain (Cdc48 subfamily) Vapar_1841 PF02803 Thiolase, C-terminal domain Vapar_1841 PF00108 Thiolase, N-terminal domain Vapar_1842 PF00472 RF-1 domain Vapar_1844 PF01740 STAS domain Vapar_1844 PF00916 Sulfate permease family Vapar_1846 PF02801 Beta-ketoacyl synthase, C-terminal domain Vapar_1846 PF00109 Beta-ketoacyl synthase, N-terminal domain Vapar_1847 PF00550 Phosphopantetheine attachment site Vapar_1852 PF03960 ArsC family Vapar_1854 PF00885 6,7-dimethyl-8-ribityllumazine synthase Vapar_1855 PF06224 Winged helix DNA-binding domain Vapar_1858 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Vapar_1858 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Vapar_1860 PF00005 ABC transporter Vapar_1861 PF09084 NMT1/THI5 like Vapar_1862 PF00528 Binding-protein-dependent transport system inner membrane component Vapar_1863 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_1864 PF17938 Tetracyclin repressor-like, C-terminal domain Vapar_1864 PF00440 Bacterial regulatory proteins, tetR family Vapar_1865 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Vapar_1865 PF00205 Thiamine pyrophosphate enzyme, central domain Vapar_1865 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Vapar_1869 PF00463 Isocitrate lyase family Vapar_1870 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Vapar_1870 PF02824 TGS domain Vapar_1870 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Vapar_1870 PF03129 Anticodon binding domain Vapar_1871 PF05198 Translation initiation factor IF-3, N-terminal domain Vapar_1871 PF00707 Translation initiation factor IF-3, C-terminal domain Vapar_1872 PF01632 Ribosomal protein L35 Vapar_1873 PF00453 Ribosomal protein L20 Vapar_1874 PF01409 tRNA synthetases class II core domain (F) Vapar_1874 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain Vapar_1875 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain Vapar_1875 PF01588 Putative tRNA binding domain Vapar_1875 PF03483 B3/4 domain Vapar_1875 PF03484 tRNA synthetase B5 domain Vapar_1875 PF03147 Ferredoxin-fold anticodon binding domain Vapar_1876 PF00216 Bacterial DNA-binding protein Vapar_1878 PF01381 Helix-turn-helix Vapar_1881 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_1883 PF03480 Bacterial extracellular solute-binding protein, family 7 Vapar_1884 PF01053 Cys/Met metabolism PLP-dependent enzyme Vapar_1886 PF00005 ABC transporter Vapar_1887 PF00528 Binding-protein-dependent transport system inner membrane component Vapar_1889 PF00497 Bacterial extracellular solute-binding proteins, family 3 Vapar_1891 PF00132 Bacterial transferase hexapeptide (six repeats) Vapar_1894 PF00266 Aminotransferase class-V Vapar_1895 PF07992 Pyridine nucleotide-disulphide oxidoreductase Vapar_1895 PF13192 Thioredoxin domain Vapar_1899 PF00528 Binding-protein-dependent transport system inner membrane component Vapar_1900 PF00005 ABC transporter Vapar_1902 PF03358 NADPH-dependent FMN reductase Vapar_1905 PF03180 NLPA lipoprotein Vapar_1906 PF00296 Luciferase-like monooxygenase Vapar_1909 PF00005 ABC transporter Vapar_1910 PF00528 Binding-protein-dependent transport system inner membrane component Vapar_1911 PF00528 Binding-protein-dependent transport system inner membrane component Vapar_1914 PF00512 His Kinase A (phospho-acceptor) domain Vapar_1914 PF00072 Response regulator receiver domain Vapar_1914 PF08448 PAS fold Vapar_1914 PF13426 PAS domain Vapar_1914 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vapar_1915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_1915 PF03466 LysR substrate binding domain Vapar_1916 PF00857 Isochorismatase family Vapar_1925 PF10531 SLBB domain Vapar_1925 PF02563 Polysaccharide biosynthesis/export protein Vapar_1926 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain Vapar_1926 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain Vapar_1926 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Vapar_1927 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Vapar_1927 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Vapar_1928 PF00132 Bacterial transferase hexapeptide (six repeats) Vapar_1929 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family Vapar_1934 PF02397 Bacterial sugar transferase Vapar_1937 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family Vapar_1939 PF02719 Polysaccharide biosynthesis protein Vapar_1940 PF13614 AAA domain Vapar_1940 PF13807 G-rich domain on putative tyrosine kinase Vapar_1940 PF02706 Chain length determinant protein Vapar_1941 PF01451 Low molecular weight phosphotyrosine protein phosphatase Vapar_1942 PF06082 Exopolysaccharide biosynthesis protein YbjH Vapar_1944 PF07005 Sugar-binding N-terminal domain Vapar_1944 PF17042 Nucleotide-binding C-terminal domain Vapar_1945 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain Vapar_1945 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain Vapar_1947 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Vapar_1948 PF03480 Bacterial extracellular solute-binding protein, family 7 Vapar_1949 PF00356 Bacterial regulatory proteins, lacI family Vapar_1950 PF03328 HpcH/HpaI aldolase/citrate lyase family Vapar_1951 PF00171 Aldehyde dehydrogenase family Vapar_1952 PF08666 SAF domain Vapar_1952 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus Vapar_1953 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_1954 PF03466 LysR substrate binding domain Vapar_1954 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_1960 PF03358 NADPH-dependent FMN reductase Vapar_1961 PF03960 ArsC family Vapar_1962 PF01022 Bacterial regulatory protein, arsR family Vapar_1963 PF01758 Sodium Bile acid symporter family Vapar_1965 PF08495 FIST N domain Vapar_1965 PF10442 FIST C domain Vapar_1965 PF00990 Diguanylate cyclase, GGDEF domain Vapar_1965 PF00563 EAL domain Vapar_1966 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain Vapar_1966 PF00437 Type II/IV secretion system protein Vapar_1967 PF03707 Bacterial signalling protein N terminal repeat Vapar_1967 PF00563 EAL domain Vapar_1967 PF00990 Diguanylate cyclase, GGDEF domain Vapar_1968 PF16657 Maltogenic Amylase, C-terminal domain Vapar_1968 PF00128 Alpha amylase, catalytic domain Vapar_1969 PF00128 Alpha amylase, catalytic domain Vapar_1970 PF05139 Erythromycin esterase Vapar_1970 PF00156 Phosphoribosyl transferase domain Vapar_1971 PF05139 Erythromycin esterase Vapar_1971 PF00156 Phosphoribosyl transferase domain Vapar_1973 PF00011 Hsp20/alpha crystallin family Vapar_1974 PF00011 Hsp20/alpha crystallin family Vapar_1978 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) Vapar_1978 PF00128 Alpha amylase, catalytic domain Vapar_1978 PF02806 Alpha amylase, C-terminal all-beta domain Vapar_1979 PF00128 Alpha amylase, catalytic domain Vapar_1979 PF11896 Domain of unknown function (DUF3416) Vapar_1980 PF00128 Alpha amylase, catalytic domain Vapar_1980 PF16657 Maltogenic Amylase, C-terminal domain Vapar_1982 PF00128 Alpha amylase, catalytic domain Vapar_1982 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) Vapar_1983 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) Vapar_1983 PF11941 Domain of unknown function (DUF3459) Vapar_1983 PF00128 Alpha amylase, catalytic domain Vapar_1984 PF02446 4-alpha-glucanotransferase Vapar_1991 PF01209 ubiE/COQ5 methyltransferase family Vapar_1999 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Vapar_1999 PF00205 Thiamine pyrophosphate enzyme, central domain Vapar_1999 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Vapar_2001 PF00571 CBS domain Vapar_2002 PF00857 Isochorismatase family Vapar_2010 PF18011 C-terminal domain found in long catalases Vapar_2010 PF00199 Catalase Vapar_2010 PF06628 Catalase-related immune-responsive Vapar_2011 PF01266 FAD dependent oxidoreductase Vapar_2012 PF16653 Saccharopine dehydrogenase C-terminal domain Vapar_2012 PF03435 Saccharopine dehydrogenase NADP binding domain Vapar_2014 PF13091 PLD-like domain Vapar_2015 PF01551 Peptidase family M23 Vapar_2015 PF01476 LysM domain Vapar_2016 PF05981 CreA protein Vapar_2017 PF00293 NUDIX domain Vapar_2017 PF09297 NADH pyrophosphatase zinc ribbon domain Vapar_2018 PF01557 Fumarylacetoacetate (FAA) hydrolase family Vapar_2019 PF13417 Glutathione S-transferase, N-terminal domain Vapar_2022 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus Vapar_2023 PF00108 Thiolase, N-terminal domain Vapar_2023 PF02803 Thiolase, C-terminal domain Vapar_2024 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_2024 PF03466 LysR substrate binding domain Vapar_2025 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_2027 PF02515 CoA-transferase family III Vapar_2028 PF03328 HpcH/HpaI aldolase/citrate lyase family Vapar_2029 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_2030 PF18146 Damage-inducible protein CinA KH domain Vapar_2030 PF02464 Competence-damaged protein Vapar_2030 PF00994 Probable molybdopterin binding domain Vapar_2031 PF00106 short chain dehydrogenase Vapar_2032 PF00375 Sodium:dicarboxylate symporter family Vapar_2033 PF00999 Sodium/hydrogen exchanger family Vapar_2033 PF02254 TrkA-N domain Vapar_2035 PF01842 ACT domain Vapar_2035 PF00742 Homoserine dehydrogenase Vapar_2035 PF03447 Homoserine dehydrogenase, NAD binding domain Vapar_2039 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_2042 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_2044 PF02525 Flavodoxin-like fold Vapar_2045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_2045 PF03466 LysR substrate binding domain Vapar_2047 PF01037 Lrp/AsnC ligand binding domain Vapar_2048 PF00205 Thiamine pyrophosphate enzyme, central domain Vapar_2048 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Vapar_2048 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Vapar_2049 PF00999 Sodium/hydrogen exchanger family Vapar_2052 PF00586 AIR synthase related protein, N-terminal domain Vapar_2052 PF02769 AIR synthase related protein, C-terminal domain Vapar_2054 PF12867 DinB superfamily Vapar_2054 PF03781 Sulfatase-modifying factor enzyme 1 Vapar_2056 PF00005 ABC transporter Vapar_2057 PF00528 Binding-protein-dependent transport system inner membrane component Vapar_2058 PF00528 Binding-protein-dependent transport system inner membrane component Vapar_2064 PF07715 TonB-dependent Receptor Plug Domain Vapar_2064 PF00593 TonB dependent receptor Vapar_2068 PF00593 TonB dependent receptor Vapar_2068 PF07715 TonB-dependent Receptor Plug Domain Vapar_2070 PF00528 Binding-protein-dependent transport system inner membrane component Vapar_2071 PF00528 Binding-protein-dependent transport system inner membrane component Vapar_2071 PF12911 N-terminal TM domain of oligopeptide transport permease C Vapar_2072 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Vapar_2072 PF00005 ABC transporter Vapar_2075 PF02261 Aspartate decarboxylase Vapar_2078 PF02195 ParB-like nuclease domain Vapar_2080 PF05284 Protein of unknown function (DUF736) Vapar_2087 PF13614 AAA domain Vapar_2090 PF10502 Signal peptidase, peptidase S26 Vapar_2092 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_2092 PF03466 LysR substrate binding domain Vapar_2094 PF02515 CoA-transferase family III Vapar_2095 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_2096 PF18158 Adaptive response protein AidB N-terminal domain Vapar_2096 PF02770 Acyl-CoA dehydrogenase, middle domain Vapar_2096 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Vapar_2097 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_2097 PF03466 LysR substrate binding domain Vapar_2098 PF00583 Acetyltransferase (GNAT) family Vapar_2101 PF13458 Periplasmic binding protein Vapar_2102 PF00005 ABC transporter Vapar_2103 PF12399 Branched-chain amino acid ATP-binding cassette transporter Vapar_2103 PF00005 ABC transporter Vapar_2104 PF11862 Domain of unknown function (DUF3382) Vapar_2104 PF02653 Branched-chain amino acid transport system / permease component Vapar_2105 PF02653 Branched-chain amino acid transport system / permease component Vapar_2106 PF00155 Aminotransferase class I and II Vapar_2107 PF01323 DSBA-like thioredoxin domain Vapar_2110 PF12833 Helix-turn-helix domain Vapar_2110 PF14525 AraC-binding-like domain Vapar_2111 PF02979 Nitrile hydratase, alpha chain Vapar_2112 PF02211 Nitrile hydratase beta subunit Vapar_2113 PF00665 Integrase core domain Vapar_2114 PF01695 IstB-like ATP binding protein Vapar_2115 PF07519 Tannase and feruloyl esterase Vapar_2118 PF07715 TonB-dependent Receptor Plug Domain Vapar_2118 PF00593 TonB dependent receptor Vapar_2121 PF00589 Phage integrase family Vapar_2122 PF01207 Dihydrouridine synthase (Dus) Vapar_2124 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_2125 PF09339 IclR helix-turn-helix domain Vapar_2126 PF07729 FCD domain Vapar_2126 PF00392 Bacterial regulatory proteins, gntR family Vapar_2130 PF01039 Carboxyl transferase domain Vapar_2131 PF00289 Biotin carboxylase, N-terminal domain Vapar_2131 PF02785 Biotin carboxylase C-terminal domain Vapar_2131 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Vapar_2132 PF06968 Biotin and Thiamin Synthesis associated domain Vapar_2132 PF04055 Radical SAM superfamily Vapar_2134 PF01037 Lrp/AsnC ligand binding domain Vapar_2135 PF00892 EamA-like transporter family Vapar_2137 PF04060 Putative Fe-S cluster Vapar_2139 PF00155 Aminotransferase class I and II Vapar_2141 PF02082 Transcriptional regulator Vapar_2142 PF00266 Aminotransferase class-V Vapar_2143 PF01592 NifU-like N terminal domain Vapar_2144 PF01521 Iron-sulphur cluster biosynthesis Vapar_2145 PF07743 HSCB C-terminal oligomerisation domain Vapar_2146 PF00012 Hsp70 protein Vapar_2147 PF00111 2Fe-2S iron-sulfur cluster binding domain Vapar_2148 PF00929 Exonuclease Vapar_2152 PF01266 FAD dependent oxidoreductase Vapar_2155 PF01180 Dihydroorotate dehydrogenase Vapar_2156 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) Vapar_2158 PF01432 Peptidase family M3 Vapar_2159 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Vapar_2159 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain Vapar_2160 PF00072 Response regulator receiver domain Vapar_2160 PF00196 Bacterial regulatory proteins, luxR family Vapar_2161 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vapar_2161 PF00989 PAS fold Vapar_2161 PF00512 His Kinase A (phospho-acceptor) domain Vapar_2162 PF17831 Pyruvate dehydrogenase E1 component middle domain Vapar_2162 PF00456 Transketolase, thiamine diphosphate binding domain Vapar_2163 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Vapar_2163 PF02817 e3 binding domain Vapar_2163 PF00364 Biotin-requiring enzyme Vapar_2164 PF00227 Proteasome subunit Vapar_2165 PF07992 Pyridine nucleotide-disulphide oxidoreductase Vapar_2165 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Vapar_2166 PF00877 NlpC/P60 family Vapar_2167 PF07995 Glucose / Sorbosone dehydrogenase Vapar_2170 PF16177 Acetyl-coenzyme A synthetase N-terminus Vapar_2170 PF00501 AMP-binding enzyme Vapar_2170 PF13193 AMP-binding enzyme C-terminal domain Vapar_2171 PF02779 Transketolase, pyrimidine binding domain Vapar_2171 PF16870 2-oxoglutarate dehydrogenase C-terminal Vapar_2171 PF00676 Dehydrogenase E1 component Vapar_2171 PF16078 2-oxoglutarate dehydrogenase N-terminus Vapar_2172 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Vapar_2172 PF00364 Biotin-requiring enzyme Vapar_2172 PF02817 e3 binding domain Vapar_2173 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Vapar_2173 PF07992 Pyridine nucleotide-disulphide oxidoreductase Vapar_2174 PF03969 AFG1-like ATPase Vapar_2178 PF13307 Helicase C-terminal domain Vapar_2178 PF06733 DEAD_2 Vapar_2179 PF13525 Outer membrane lipoprotein Vapar_2180 PF00849 RNA pseudouridylate synthase Vapar_2180 PF01479 S4 domain Vapar_2181 PF04079 Segregation and condensation complex subunit ScpB Vapar_2182 PF00849 RNA pseudouridylate synthase Vapar_2182 PF01479 S4 domain Vapar_2183 PF00334 Nucleoside diphosphate kinase Vapar_2184 PF04055 Radical SAM superfamily Vapar_2187 PF04551 GcpE protein Vapar_2188 PF03129 Anticodon binding domain Vapar_2188 PF13393 Histidyl-tRNA synthetase Vapar_2190 PF13360 PQQ-like domain Vapar_2191 PF01926 50S ribosome-binding GTPase Vapar_2191 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal Vapar_2192 PF17209 Hfq protein Vapar_2193 PF13167 GTP-binding GTPase N-terminal Vapar_2193 PF16360 GTP-binding GTPase Middle Region Vapar_2193 PF01926 50S ribosome-binding GTPase Vapar_2194 PF01145 SPFH domain / Band 7 family Vapar_2194 PF12221 Bacterial membrane protein N terminal Vapar_2195 PF01145 SPFH domain / Band 7 family Vapar_2197 PF13393 Histidyl-tRNA synthetase Vapar_2198 PF00709 Adenylosuccinate synthetase Vapar_2203 PF01053 Cys/Met metabolism PLP-dependent enzyme Vapar_2205 PF13472 GDSL-like Lipase/Acylhydrolase family Vapar_2206 PF00005 ABC transporter Vapar_2208 PF08032 RNA 2'-O ribose methyltransferase substrate binding Vapar_2208 PF00588 SpoU rRNA Methylase family Vapar_2213 PF00248 Aldo/keto reductase family Vapar_2214 PF02417 Chromate transporter Vapar_2216 PF03631 Virulence factor BrkB Vapar_2221 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_2223 PF01970 Tripartite tricarboxylate transporter TctA family Vapar_2225 PF11842 Domain of unknown function (DUF3362) Vapar_2225 PF08497 Radical SAM N-terminal Vapar_2225 PF04055 Radical SAM superfamily Vapar_2229 PF02515 CoA-transferase family III Vapar_2234 PF00378 Enoyl-CoA hydratase/isomerase Vapar_2236 PF01168 Alanine racemase, N-terminal domain Vapar_2236 PF14031 Putative serine dehydratase domain Vapar_2259 PF01313 Bacterial export proteins, family 3 Vapar_2260 PF01311 Bacterial export proteins, family 1 Vapar_2261 PF01312 FlhB HrpN YscU SpaS Family Vapar_2262 PF00771 FHIPEP family Vapar_2263 PF00460 Flagella basal body rod protein Vapar_2263 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Vapar_2264 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Vapar_2264 PF00460 Flagella basal body rod protein Vapar_2266 PF02107 Flagellar L-ring protein Vapar_2267 PF02119 Flagellar P-ring protein Vapar_2269 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Vapar_2269 PF00460 Flagella basal body rod protein Vapar_2270 PF02049 Flagellar hook-basal body complex protein FliE Vapar_2271 PF08345 Flagellar M-ring protein C-terminal Vapar_2271 PF01514 Secretory protein of YscJ/FliF family Vapar_2274 PF02874 ATP synthase alpha/beta family, beta-barrel domain Vapar_2274 PF18269 T3SS EscN ATPase C-terminal domain Vapar_2274 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Vapar_2277 PF03963 Flagellar hook capping protein - N-terminal region Vapar_2278 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Vapar_2278 PF00460 Flagella basal body rod protein Vapar_2278 PF07559 Flagellar basal body protein FlaE Vapar_2280 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term Vapar_2282 PF00813 FliP family Vapar_2283 PF00140 Sigma-70 factor, region 1.2 Vapar_2283 PF04542 Sigma-70 region 2 Vapar_2283 PF04539 Sigma-70 region 3 Vapar_2283 PF04545 Sigma-70, region 4 Vapar_2295 PF01609 Transposase DDE domain Vapar_2295 PF05598 Transposase domain (DUF772) Vapar_2301 PF13356 Arm DNA-binding domain Vapar_2301 PF00589 Phage integrase family Vapar_2303 PF00043 Glutathione S-transferase, C-terminal domain Vapar_2303 PF02798 Glutathione S-transferase, N-terminal domain Vapar_2304 PF07992 Pyridine nucleotide-disulphide oxidoreductase Vapar_2306 PF13090 Polyphosphate kinase C-terminal domain 2 Vapar_2306 PF17941 Polyphosphate kinase C-terminal domain 1 Vapar_2306 PF02503 Polyphosphate kinase middle domain Vapar_2306 PF13089 Polyphosphate kinase N-terminal domain Vapar_2310 PF02541 Ppx/GppA phosphatase family Vapar_2311 PF12849 PBP superfamily domain Vapar_2312 PF00528 Binding-protein-dependent transport system inner membrane component Vapar_2313 PF00528 Binding-protein-dependent transport system inner membrane component Vapar_2314 PF00005 ABC transporter Vapar_2315 PF01895 PhoU domain Vapar_2316 PF00486 Transcriptional regulatory protein, C terminal Vapar_2316 PF00072 Response regulator receiver domain Vapar_2317 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vapar_2317 PF00512 His Kinase A (phospho-acceptor) domain Vapar_2317 PF11808 Phosphate regulon sensor protein PhoR Vapar_2317 PF00989 PAS fold Vapar_2318 PF01554 MatE Vapar_2320 PF01197 Ribosomal protein L31 Vapar_2321 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Vapar_2321 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Vapar_2322 PF07497 Rho termination factor, RNA-binding domain Vapar_2322 PF07498 Rho termination factor, N-terminal domain Vapar_2322 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Vapar_2323 PF00085 Thioredoxin Vapar_2330 PF12169 DNA polymerase III subunits gamma and tau domain III Vapar_2330 PF12170 DNA polymerase III tau subunit V interacting with alpha Vapar_2330 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding Vapar_2331 PF02575 YbaB/EbfC DNA-binding family Vapar_2332 PF02132 RecR protein Vapar_2332 PF13662 Toprim domain Vapar_2335 PF00005 ABC transporter Vapar_2336 PF00528 Binding-protein-dependent transport system inner membrane component Vapar_2337 PF01476 LysM domain Vapar_2337 PF01464 Transglycosylase SLT domain Vapar_2338 PF00753 Metallo-beta-lactamase superfamily Vapar_2338 PF16123 Hydroxyacylglutathione hydrolase C-terminus Vapar_2339 PF01209 ubiE/COQ5 methyltransferase family Vapar_2340 PF00075 RNase H Vapar_2341 PF03454 MoeA C-terminal region (domain IV) Vapar_2341 PF00994 Probable molybdopterin binding domain Vapar_2341 PF03453 MoeA N-terminal region (domain I and II) Vapar_2342 PF12804 MobA-like NTP transferase domain Vapar_2343 PF04055 Radical SAM superfamily Vapar_2343 PF06463 Molybdenum Cofactor Synthesis C Vapar_2344 PF00171 Aldehyde dehydrogenase family Vapar_2346 PF13091 PLD-like domain Vapar_2357 PF03030 Inorganic H+ pyrophosphatase Vapar_2358 PF00719 Inorganic pyrophosphatase Vapar_2360 PF00795 Carbon-nitrogen hydrolase Vapar_2360 PF02540 NAD synthase Vapar_2361 PF00543 Nitrogen regulatory protein P-II Vapar_2362 PF03641 Possible lysine decarboxylase Vapar_2363 PF01219 Prokaryotic diacylglycerol kinase Vapar_2368 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Vapar_2368 PF00205 Thiamine pyrophosphate enzyme, central domain Vapar_2368 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Vapar_2369 PF10369 Small subunit of acetolactate synthase Vapar_2371 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain Vapar_2371 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain Vapar_2372 PF01066 CDP-alcohol phosphatidyltransferase Vapar_2373 PF00682 HMGL-like Vapar_2373 PF08502 LeuA allosteric (dimerisation) domain Vapar_2374 PF00682 HMGL-like Vapar_2374 PF08502 LeuA allosteric (dimerisation) domain Vapar_2375 PF00768 D-alanyl-D-alanine carboxypeptidase Vapar_2376 PF09339 IclR helix-turn-helix domain Vapar_2376 PF01614 Bacterial transcriptional regulator Vapar_2377 PF04376 Arginine-tRNA-protein transferase, N terminus Vapar_2377 PF04377 Arginine-tRNA-protein transferase, C terminus Vapar_2378 PF03588 Leucyl/phenylalanyl-tRNA protein transferase Vapar_2379 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Vapar_2379 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase Vapar_2380 PF12833 Helix-turn-helix domain Vapar_2382 PF01494 FAD binding domain Vapar_2383 PF09339 IclR helix-turn-helix domain Vapar_2383 PF01614 Bacterial transcriptional regulator Vapar_2384 PF00486 Transcriptional regulatory protein, C terminal Vapar_2384 PF00072 Response regulator receiver domain Vapar_2385 PF00512 His Kinase A (phospho-acceptor) domain Vapar_2385 PF08521 Two-component sensor kinase N-terminal Vapar_2385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vapar_2386 PF17820 PDZ domain Vapar_2386 PF13180 PDZ domain Vapar_2394 PF07715 TonB-dependent Receptor Plug Domain Vapar_2394 PF00593 TonB dependent receptor Vapar_2395 PF02581 Thiamine monophosphate synthase Vapar_2396 PF05690 Thiazole biosynthesis protein ThiG Vapar_2398 PF01266 FAD dependent oxidoreductase Vapar_2399 PF08543 Phosphomethylpyrimidine kinase Vapar_2401 PF00202 Aminotransferase class-III Vapar_2403 PF11953 Domain of unknown function (DUF3470) Vapar_2403 PF00037 4Fe-4S binding domain Vapar_2404 PF00009 Elongation factor Tu GTP binding domain Vapar_2405 PF01507 Phosphoadenosine phosphosulfate reductase family Vapar_2406 PF01507 Phosphoadenosine phosphosulfate reductase family Vapar_2409 PF00665 Integrase core domain Vapar_2410 PF00873 AcrB/AcrD/AcrF family Vapar_2412 PF02321 Outer membrane efflux protein Vapar_2414 PF02954 Bacterial regulatory protein, Fis family Vapar_2414 PF00158 Sigma-54 interaction domain Vapar_2414 PF00072 Response regulator receiver domain Vapar_2417 PF10503 Esterase PHB depolymerase Vapar_2418 PF00005 ABC transporter Vapar_2418 PF12399 Branched-chain amino acid ATP-binding cassette transporter Vapar_2420 PF00005 ABC transporter Vapar_2425 PF00762 Ferrochelatase Vapar_2449 PF00114 Pilin (bacterial filament) Vapar_2449 PF07963 Prokaryotic N-terminal methylation motif Vapar_2473 PF00574 Clp protease Vapar_2501 PF13419 Haloacid dehalogenase-like hydrolase Vapar_2504 PF01593 Flavin containing amine oxidoreductase Vapar_2507 PF02705 K+ potassium transporter Vapar_2508 PF13533 Biotin-lipoyl like Vapar_2509 PF00873 AcrB/AcrD/AcrF family Vapar_2510 PF05697 Bacterial trigger factor protein (TF) Vapar_2510 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Vapar_2510 PF05698 Bacterial trigger factor protein (TF) C-terminus Vapar_2511 PF00574 Clp protease Vapar_2512 PF10431 C-terminal, D2-small domain, of ClpB protein Vapar_2512 PF06689 ClpX C4-type zinc finger Vapar_2512 PF07724 AAA domain (Cdc48 subfamily) Vapar_2513 PF02190 ATP-dependent protease La (LON) substrate-binding domain Vapar_2513 PF00004 ATPase family associated with various cellular activities (AAA) Vapar_2513 PF05362 Lon protease (S16) C-terminal proteolytic domain Vapar_2517 PF01177 Asp/Glu/Hydantoin racemase Vapar_2519 PF04069 Substrate binding domain of ABC-type glycine betaine transport system Vapar_2520 PF00528 Binding-protein-dependent transport system inner membrane component Vapar_2521 PF00571 CBS domain Vapar_2521 PF00005 ABC transporter Vapar_2522 PF10415 Fumarase C C-terminus Vapar_2522 PF00206 Lyase Vapar_2523 PF13460 NAD(P)H-binding Vapar_2524 PF03466 LysR substrate binding domain Vapar_2524 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_2525 PF03350 Uncharacterized protein family, UPF0114 Vapar_2526 PF00501 AMP-binding enzyme Vapar_2526 PF16177 Acetyl-coenzyme A synthetase N-terminus Vapar_2526 PF13193 AMP-binding enzyme C-terminal domain Vapar_2528 PF00034 Cytochrome c Vapar_2530 PF00920 Dehydratase family Vapar_2531 PF03466 LysR substrate binding domain Vapar_2531 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_2532 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_2532 PF03466 LysR substrate binding domain Vapar_2534 PF01790 Prolipoprotein diacylglyceryl transferase Vapar_2535 PF07729 FCD domain Vapar_2535 PF00392 Bacterial regulatory proteins, gntR family Vapar_2537 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_2538 PF00501 AMP-binding enzyme Vapar_2538 PF13193 AMP-binding enzyme C-terminal domain Vapar_2541 PF00795 Carbon-nitrogen hydrolase Vapar_2542 PF02311 AraC-like ligand binding domain Vapar_2542 PF12833 Helix-turn-helix domain Vapar_2544 PF01925 Sulfite exporter TauE/SafE Vapar_2547 PF07715 TonB-dependent Receptor Plug Domain Vapar_2547 PF00593 TonB dependent receptor Vapar_2548 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Vapar_2548 PF07685 CobB/CobQ-like glutamine amidotransferase domain Vapar_2549 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase Vapar_2551 PF01032 FecCD transport family Vapar_2552 PF00005 ABC transporter Vapar_2553 PF12557 Cob(I)alamin adenosyltransferase N terminal Vapar_2553 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP Vapar_2554 PF00881 Nitroreductase family Vapar_2555 PF03186 CobD/Cbib protein Vapar_2556 PF00155 Aminotransferase class I and II Vapar_2557 PF03788 LrgA family Vapar_2560 PF03466 LysR substrate binding domain Vapar_2560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_2561 PF07859 alpha/beta hydrolase fold Vapar_2562 PF13533 Biotin-lipoyl like Vapar_2563 PF00873 AcrB/AcrD/AcrF family Vapar_2564 PF02321 Outer membrane efflux protein Vapar_2565 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Vapar_2565 PF07685 CobB/CobQ-like glutamine amidotransferase domain Vapar_2566 PF02277 Phosphoribosyltransferase Vapar_2567 PF02654 Cobalamin-5-phosphate synthase Vapar_2571 PF10576 Iron-sulfur binding domain of endonuclease III Vapar_2571 PF00633 Helix-hairpin-helix motif Vapar_2571 PF00730 HhH-GPD superfamily base excision DNA repair protein Vapar_2572 PF00155 Aminotransferase class I and II Vapar_2578 PF00271 Helicase conserved C-terminal domain Vapar_2578 PF02559 CarD-like/TRCF domain Vapar_2578 PF03461 TRCF domain Vapar_2578 PF17757 UvrB interaction domain Vapar_2578 PF00270 DEAD/DEAH box helicase Vapar_2579 PF02542 YgbB family Vapar_2579 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Vapar_2580 PF02542 YgbB family Vapar_2580 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Vapar_2581 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vapar_2581 PF00512 His Kinase A (phospho-acceptor) domain Vapar_2581 PF00672 HAMP domain Vapar_2582 PF00486 Transcriptional regulatory protein, C terminal Vapar_2582 PF00072 Response regulator receiver domain Vapar_2585 PF00106 short chain dehydrogenase Vapar_2587 PF13291 ACT domain Vapar_2587 PF04607 Region found in RelA / SpoT proteins Vapar_2587 PF02824 TGS domain Vapar_2589 PF05233 PHB accumulation regulatory domain Vapar_2589 PF07879 PHB/PHA accumulation regulator DNA-binding domain Vapar_2590 PF00919 Uncharacterized protein family UPF0004 Vapar_2590 PF18693 TRAM domain Vapar_2590 PF04055 Radical SAM superfamily Vapar_2593 PF06803 Protein of unknown function (DUF1232) Vapar_2596 PF03853 YjeF-related protein N-terminus Vapar_2596 PF01256 Carbohydrate kinase Vapar_2597 PF01266 FAD dependent oxidoreductase Vapar_2598 PF01425 Amidase Vapar_2599 PF00318 Ribosomal protein S2 Vapar_2600 PF00889 Elongation factor TS Vapar_2601 PF00696 Amino acid kinase family Vapar_2602 PF01765 Ribosome recycling factor Vapar_2603 PF01255 Putative undecaprenyl diphosphate synthase Vapar_2605 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase Vapar_2605 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain Vapar_2605 PF13288 DXP reductoisomerase C-terminal domain Vapar_2606 PF02163 Peptidase family M50 Vapar_2606 PF17820 PDZ domain Vapar_2607 PF07244 Surface antigen variable number repeat Vapar_2607 PF01103 Surface antigen Vapar_2609 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD Vapar_2609 PF14602 Hexapeptide repeat of succinyl-transferase Vapar_2609 PF00132 Bacterial transferase hexapeptide (six repeats) Vapar_2610 PF07977 FabA-like domain Vapar_2611 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 Vapar_2611 PF00132 Bacterial transferase hexapeptide (six repeats) Vapar_2612 PF02684 Lipid-A-disaccharide synthetase Vapar_2613 PF01351 Ribonuclease HII Vapar_2614 PF08032 RNA 2'-O ribose methyltransferase substrate binding Vapar_2614 PF00588 SpoU rRNA Methylase family Vapar_2615 PF00117 Glutamine amidotransferase class-I Vapar_2615 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain Vapar_2617 PF02142 MGS-like domain Vapar_2617 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain Vapar_2617 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Vapar_2619 PF03449 Transcription elongation factor, N-terminal Vapar_2619 PF01272 Transcription elongation factor, GreA/GreB, C-term Vapar_2622 PF01985 CRS1 / YhbY (CRM) domain Vapar_2623 PF01728 FtsJ-like methyltransferase Vapar_2624 PF01434 Peptidase family M41 Vapar_2624 PF06480 FtsH Extracellular Vapar_2624 PF17862 AAA+ lid domain Vapar_2624 PF00004 ATPase family associated with various cellular activities (AAA) Vapar_2625 PF00809 Pterin binding enzyme Vapar_2626 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Vapar_2626 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Vapar_2626 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Vapar_2626 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Vapar_2628 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Vapar_2628 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Vapar_2628 PF02770 Acyl-CoA dehydrogenase, middle domain Vapar_2630 PF13545 Crp-like helix-turn-helix domain Vapar_2630 PF00027 Cyclic nucleotide-binding domain Vapar_2631 PF00378 Enoyl-CoA hydratase/isomerase Vapar_2632 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain Vapar_2632 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Vapar_2632 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Vapar_2633 PF07690 Major Facilitator Superfamily Vapar_2634 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Vapar_2634 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Vapar_2636 PF00717 Peptidase S24-like Vapar_2636 PF01726 LexA DNA binding domain Vapar_2637 PF17763 Glutaminase/Asparaginase C-terminal domain Vapar_2637 PF00710 Asparaginase, N-terminal Vapar_2638 PF05191 Adenylate kinase, active site lid Vapar_2639 PF02348 Cytidylyltransferase Vapar_2640 PF03966 Trm112p-like protein Vapar_2641 PF02606 Tetraacyldisaccharide-1-P 4'-kinase Vapar_2642 PF02472 Biopolymer transport protein ExbD/TolR Vapar_2643 PF01618 MotA/TolQ/ExbB proton channel family Vapar_2644 PF13742 OB-fold nucleic acid binding domain Vapar_2644 PF02601 Exonuclease VII, large subunit Vapar_2645 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain Vapar_2645 PF02777 Iron/manganese superoxide dismutases, C-terminal domain Vapar_2649 PF00180 Isocitrate/isopropylmalate dehydrogenase Vapar_2650 PF02617 ATP-dependent Clp protease adaptor protein ClpS Vapar_2651 PF10431 C-terminal, D2-small domain, of ClpB protein Vapar_2651 PF00004 ATPase family associated with various cellular activities (AAA) Vapar_2651 PF07724 AAA domain (Cdc48 subfamily) Vapar_2651 PF17871 AAA lid domain Vapar_2651 PF02861 Clp amino terminal domain, pathogenicity island component Vapar_2652 PF13091 PLD-like domain Vapar_2652 PF13396 Phospholipase_D-nuclease N-terminal Vapar_2653 PF00929 Exonuclease Vapar_2653 PF08411 Exonuclease C-terminal Vapar_2654 PF07969 Amidohydrolase family Vapar_2659 PF01048 Phosphorylase superfamily Vapar_2660 PF02608 ABC transporter substrate-binding protein PnrA-like Vapar_2666 PF04542 Sigma-70 region 2 Vapar_2666 PF08281 Sigma-70, region 4 Vapar_2667 PF06532 Negative regulator of sigma F Vapar_2668 PF05872 Bacterial protein of unknown function (DUF853) Vapar_2671 PF07977 FabA-like domain Vapar_2682 PF01209 ubiE/COQ5 methyltransferase family Vapar_2683 PF01709 Transcriptional regulator Vapar_2684 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain Vapar_2684 PF02843 Phosphoribosylglycinamide synthetase, C domain Vapar_2684 PF02844 Phosphoribosylglycinamide synthetase, N domain Vapar_2685 PF01218 Coproporphyrinogen III oxidase Vapar_2686 PF01467 Cytidylyltransferase-like Vapar_2688 PF02590 Predicted SPOUT methyltransferase Vapar_2689 PF02545 Maf-like protein Vapar_2690 PF00575 S1 RNA binding domain Vapar_2690 PF10150 Ribonuclease E/G family Vapar_2691 PF00664 ABC transporter transmembrane region Vapar_2691 PF00005 ABC transporter Vapar_2692 PF04052 TolB amino-terminal domain Vapar_2692 PF07676 WD40-like Beta Propeller Repeat Vapar_2693 PF00691 OmpA family Vapar_2695 PF00899 ThiF family Vapar_2702 PF01695 IstB-like ATP binding protein Vapar_2703 PF00665 Integrase core domain Vapar_2716 PF05175 Methyltransferase small domain Vapar_2717 PF07687 Peptidase dimerisation domain Vapar_2717 PF01546 Peptidase family M20/M25/M40 Vapar_2718 PF00437 Type II/IV secretion system protein Vapar_2719 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal Vapar_2719 PF14602 Hexapeptide repeat of succinyl-transferase Vapar_2719 PF00132 Bacterial transferase hexapeptide (six repeats) Vapar_2720 PF00155 Aminotransferase class I and II Vapar_2721 PF01810 LysE type translocator Vapar_2722 PF00696 Amino acid kinase family Vapar_2722 PF00583 Acetyltransferase (GNAT) family Vapar_2723 PF11898 Domain of unknown function (DUF3418) Vapar_2723 PF04408 Helicase associated domain (HA2) Vapar_2723 PF00270 DEAD/DEAH box helicase Vapar_2723 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold Vapar_2723 PF00271 Helicase conserved C-terminal domain Vapar_2725 PF00155 Aminotransferase class I and II Vapar_2726 PF03466 LysR substrate binding domain Vapar_2726 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_2730 PF00883 Cytosol aminopeptidase family, catalytic domain Vapar_2730 PF02789 Cytosol aminopeptidase family, N-terminal domain Vapar_2733 PF13458 Periplasmic binding protein Vapar_2736 PF01145 SPFH domain / Band 7 family Vapar_2738 PF01276 Orn/Lys/Arg decarboxylase, major domain Vapar_2738 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain Vapar_2738 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain Vapar_2739 PF14743 DNA ligase OB-like domain Vapar_2739 PF01068 ATP dependent DNA ligase domain Vapar_2741 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Vapar_2742 PF00528 Binding-protein-dependent transport system inner membrane component Vapar_2743 PF00528 Binding-protein-dependent transport system inner membrane component Vapar_2743 PF12911 N-terminal TM domain of oligopeptide transport permease C Vapar_2744 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Vapar_2744 PF00005 ABC transporter Vapar_2745 PF06779 Uncharacterised MFS-type transporter YbfB Vapar_2746 PF02576 RimP N-terminal domain Vapar_2747 PF08529 NusA N-terminal domain Vapar_2747 PF13184 NusA-like KH domain Vapar_2748 PF00009 Elongation factor Tu GTP binding domain Vapar_2748 PF11987 Translation-initiation factor 2 Vapar_2748 PF08364 Bacterial translation initiation factor IF-2 associated region Vapar_2748 PF04760 Translation initiation factor IF-2, N-terminal region Vapar_2749 PF02033 Ribosome-binding factor A Vapar_2750 PF01509 TruB family pseudouridylate synthase (N terminal domain) Vapar_2750 PF16198 tRNA pseudouridylate synthase B C-terminal domain Vapar_2755 PF04542 Sigma-70 region 2 Vapar_2755 PF08281 Sigma-70, region 4 Vapar_2757 PF01668 SmpB protein Vapar_2758 PF03364 Polyketide cyclase / dehydrase and lipid transport Vapar_2759 PF03658 RnfH family Ubiquitin Vapar_2761 PF00571 CBS domain Vapar_2761 PF00478 IMP dehydrogenase / GMP reductase domain Vapar_2764 PF00958 GMP synthase C terminal domain Vapar_2764 PF02540 NAD synthase Vapar_2764 PF00117 Glutamine amidotransferase class-I Vapar_2765 PF01638 HxlR-like helix-turn-helix Vapar_2768 PF00491 Arginase family Vapar_2769 PF00561 alpha/beta hydrolase fold Vapar_2771 PF02954 Bacterial regulatory protein, Fis family Vapar_2771 PF00158 Sigma-54 interaction domain Vapar_2771 PF06506 Propionate catabolism activator Vapar_2772 PF02515 CoA-transferase family III Vapar_2773 PF00682 HMGL-like Vapar_2776 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_2777 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_2778 PF03466 LysR substrate binding domain Vapar_2778 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_2780 PF01042 Endoribonuclease L-PSP Vapar_2782 PF00005 ABC transporter Vapar_2783 PF00950 ABC 3 transport family Vapar_2784 PF01297 Zinc-uptake complex component A periplasmic Vapar_2786 PF00775 Dioxygenase Vapar_2786 PF04444 Catechol dioxygenase N terminus Vapar_2790 PF13426 PAS domain Vapar_2790 PF00512 His Kinase A (phospho-acceptor) domain Vapar_2790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vapar_2790 PF13493 Domain of unknown function (DUF4118) Vapar_2790 PF08447 PAS fold Vapar_2790 PF00989 PAS fold Vapar_2791 PF00072 Response regulator receiver domain Vapar_2791 PF00196 Bacterial regulatory proteins, luxR family Vapar_2796 PF14437 MafB19-like deaminase Vapar_2797 PF02016 LD-carboxypeptidase N-terminal domain Vapar_2797 PF17676 LD-carboxypeptidase C-terminal domain Vapar_2799 PF16701 Adenylate cyclase regulatory domain Vapar_2799 PF00211 Adenylate and Guanylate cyclase catalytic domain Vapar_2802 PF00512 His Kinase A (phospho-acceptor) domain Vapar_2802 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vapar_2803 PF01339 CheB methylesterase Vapar_2804 PF01739 CheR methyltransferase, SAM binding domain Vapar_2804 PF03705 CheR methyltransferase, all-alpha domain Vapar_2806 PF13307 Helicase C-terminal domain Vapar_2810 PF00202 Aminotransferase class-III Vapar_2813 PF00248 Aldo/keto reductase family Vapar_2814 PF06719 AraC-type transcriptional regulator N-terminus Vapar_2814 PF12833 Helix-turn-helix domain Vapar_2816 PF00403 Heavy-metal-associated domain Vapar_2818 PF00115 Cytochrome C and Quinol oxidase polypeptide I Vapar_2821 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP Vapar_2821 PF13442 Cytochrome C oxidase, cbb3-type, subunit III Vapar_2822 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase Vapar_2822 PF12801 4Fe-4S binding domain Vapar_2822 PF13746 4Fe-4S dicluster domain Vapar_2824 PF06969 HemN C-terminal domain Vapar_2824 PF04055 Radical SAM superfamily Vapar_2826 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase Vapar_2826 PF09363 XFP C-terminal domain Vapar_2826 PF09364 XFP N-terminal domain Vapar_2829 PF00582 Universal stress protein family Vapar_2835 PF05567 Neisseria PilC beta-propeller domain Vapar_2839 PF07963 Prokaryotic N-terminal methylation motif Vapar_2839 PF00114 Pilin (bacterial filament) Vapar_2844 PF12951 Passenger-associated-transport-repeat Vapar_2844 PF12951 Passenger-associated-transport-repeat Vapar_2845 PF03793 PASTA domain Vapar_2845 PF00069 Protein kinase domain Vapar_2847 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Vapar_2848 PF00355 Rieske [2Fe-2S] domain Vapar_2849 PF18267 Rubredoxin NAD+ reductase C-terminal domain Vapar_2849 PF07992 Pyridine nucleotide-disulphide oxidoreductase Vapar_2849 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain Vapar_2849 PF01077 Nitrite and sulphite reductase 4Fe-4S domain Vapar_2849 PF04324 BFD-like [2Fe-2S] binding domain Vapar_2850 PF07311 Dodecin Vapar_2851 PF01894 Uncharacterised protein family UPF0047 Vapar_2854 PF12796 Ankyrin repeats (3 copies) Vapar_2855 PF01026 TatD related DNase Vapar_2857 PF09115 DNA polymerase III, delta subunit, C terminal Vapar_2858 PF02223 Thymidylate kinase Vapar_2859 PF02618 YceG-like family Vapar_2860 PF01571 Aminomethyltransferase folate-binding domain Vapar_2863 PF07859 alpha/beta hydrolase fold Vapar_2864 PF00465 Iron-containing alcohol dehydrogenase Vapar_2865 PF04717 Type VI secretion system, phage-baseplate injector Vapar_2865 PF16671 Actin cross-linking domain Vapar_2871 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_2873 PF01850 PIN domain Vapar_2875 PF09371 Tex-like protein N-terminal domain Vapar_2875 PF00575 S1 RNA binding domain Vapar_2875 PF17674 HHH domain Vapar_2875 PF16921 Tex protein YqgF-like domain Vapar_2876 PF07729 FCD domain Vapar_2876 PF00392 Bacterial regulatory proteins, gntR family Vapar_2879 PF08240 Alcohol dehydrogenase GroES-like domain Vapar_2879 PF00107 Zinc-binding dehydrogenase Vapar_2880 PF00528 Binding-protein-dependent transport system inner membrane component Vapar_2882 PF00005 ABC transporter Vapar_2883 PF13378 Enolase C-terminal domain-like Vapar_2883 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Vapar_2884 PF01232 Mannitol dehydrogenase Rossmann domain Vapar_2884 PF08125 Mannitol dehydrogenase C-terminal domain Vapar_2889 PF01554 MatE Vapar_2891 PF07690 Major Facilitator Superfamily Vapar_2893 PF02470 MlaD protein Vapar_2894 PF04403 Paraquat-inducible protein A Vapar_2895 PF04403 Paraquat-inducible protein A Vapar_2896 PF07690 Major Facilitator Superfamily Vapar_2897 PF07690 Major Facilitator Superfamily Vapar_2898 PF01435 Peptidase family M48 Vapar_2901 PF03466 LysR substrate binding domain Vapar_2901 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_2903 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain Vapar_2903 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain Vapar_2904 PF01565 FAD binding domain Vapar_2904 PF02913 FAD linked oxidases, C-terminal domain Vapar_2904 PF13183 4Fe-4S dicluster domain Vapar_2905 PF00392 Bacterial regulatory proteins, gntR family Vapar_2905 PF07729 FCD domain Vapar_2906 PF00266 Aminotransferase class-V Vapar_2909 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_2909 PF03466 LysR substrate binding domain Vapar_2910 PF07690 Major Facilitator Superfamily Vapar_2911 PF00248 Aldo/keto reductase family Vapar_2912 PF02525 Flavodoxin-like fold Vapar_2913 PF03466 LysR substrate binding domain Vapar_2913 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_2914 PF00106 short chain dehydrogenase Vapar_2916 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Vapar_2916 PF18158 Adaptive response protein AidB N-terminal domain Vapar_2916 PF02770 Acyl-CoA dehydrogenase, middle domain Vapar_2917 PF00107 Zinc-binding dehydrogenase Vapar_2917 PF16884 N-terminal domain of oxidoreductase Vapar_2922 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Vapar_2922 PF12806 Acetyl-CoA dehydrogenase C-terminal like Vapar_2922 PF02770 Acyl-CoA dehydrogenase, middle domain Vapar_2922 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Vapar_2923 PF02803 Thiolase, C-terminal domain Vapar_2923 PF00108 Thiolase, N-terminal domain Vapar_2924 PF07687 Peptidase dimerisation domain Vapar_2924 PF01546 Peptidase family M20/M25/M40 Vapar_2925 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Vapar_2925 PF00378 Enoyl-CoA hydratase/isomerase Vapar_2925 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Vapar_2926 PF00005 ABC transporter Vapar_2927 PF00005 ABC transporter Vapar_2927 PF12399 Branched-chain amino acid ATP-binding cassette transporter Vapar_2929 PF02653 Branched-chain amino acid transport system / permease component Vapar_2932 PF13193 AMP-binding enzyme C-terminal domain Vapar_2932 PF00501 AMP-binding enzyme Vapar_2933 PF00135 Carboxylesterase family Vapar_2935 PF02696 Uncharacterized ACR, YdiU/UPF0061 family Vapar_2936 PF01641 SelR domain Vapar_2937 PF04279 Intracellular septation protein A Vapar_2940 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal Vapar_2940 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain Vapar_2940 PF02769 AIR synthase related protein, C-terminal domain Vapar_2941 PF00557 Metallopeptidase family M24 Vapar_2943 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Vapar_2943 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Vapar_2943 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Vapar_2943 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Vapar_2944 PF00528 Binding-protein-dependent transport system inner membrane component Vapar_2945 PF00528 Binding-protein-dependent transport system inner membrane component Vapar_2946 PF00497 Bacterial extracellular solute-binding proteins, family 3 Vapar_2948 PF01327 Polypeptide deformylase Vapar_2950 PF12826 Helix-hairpin-helix motif Vapar_2950 PF00533 BRCA1 C Terminus (BRCT) domain Vapar_2950 PF03119 NAD-dependent DNA ligase C4 zinc finger domain Vapar_2950 PF01653 NAD-dependent DNA ligase adenylation domain Vapar_2950 PF03120 NAD-dependent DNA ligase OB-fold domain Vapar_2952 PF06470 SMC proteins Flexible Hinge Domain Vapar_2952 PF02463 RecF/RecN/SMC N terminal domain Vapar_2955 PF07804 HipA-like C-terminal domain Vapar_2955 PF13657 HipA N-terminal domain Vapar_2957 PF02600 Disulfide bond formation protein DsbB Vapar_2958 PF00005 ABC transporter Vapar_2958 PF17850 CysA C-terminal regulatory domain Vapar_2958 PF12857 TOBE-like domain Vapar_2959 PF00528 Binding-protein-dependent transport system inner membrane component Vapar_2960 PF00528 Binding-protein-dependent transport system inner membrane component Vapar_2963 PF10417 C-terminal domain of 1-Cys peroxiredoxin Vapar_2963 PF00578 AhpC/TSA family Vapar_2964 PF03466 LysR substrate binding domain Vapar_2964 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_2965 PF02525 Flavodoxin-like fold Vapar_2966 PF03358 NADPH-dependent FMN reductase Vapar_2967 PF08546 Ketopantoate reductase PanE/ApbA C terminal Vapar_2967 PF02558 Ketopantoate reductase PanE/ApbA Vapar_2969 PF04820 Tryptophan halogenase Vapar_2970 PF00132 Bacterial transferase hexapeptide (six repeats) Vapar_2971 PF03459 TOBE domain Vapar_2972 PF01053 Cys/Met metabolism PLP-dependent enzyme Vapar_2973 PF00005 ABC transporter Vapar_2974 PF09084 NMT1/THI5 like Vapar_2975 PF00528 Binding-protein-dependent transport system inner membrane component Vapar_2976 PF00296 Luciferase-like monooxygenase Vapar_2978 PF09084 NMT1/THI5 like Vapar_2980 PF03358 NADPH-dependent FMN reductase Vapar_2982 PF04362 Bacterial Fe(2+) trafficking Vapar_2983 PF01266 FAD dependent oxidoreductase Vapar_2983 PF05430 S-adenosyl-L-methionine-dependent methyltransferase Vapar_2987 PF00672 HAMP domain Vapar_2987 PF00989 PAS fold Vapar_2987 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vapar_2987 PF18698 Histidine kinase sensor domain Vapar_2987 PF00512 His Kinase A (phospho-acceptor) domain Vapar_2988 PF00072 Response regulator receiver domain Vapar_2988 PF00486 Transcriptional regulatory protein, C terminal Vapar_2989 PF01292 Prokaryotic cytochrome b561 Vapar_2990 PF00174 Oxidoreductase molybdopterin binding domain Vapar_2992 PF01625 Peptide methionine sulfoxide reductase Vapar_2993 PF00274 Fructose-bisphosphate aldolase class-I Vapar_2994 PF01266 FAD dependent oxidoreductase Vapar_2995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_2995 PF03466 LysR substrate binding domain Vapar_2999 PF00376 MerR family regulatory protein Vapar_2999 PF09278 MerR, DNA binding Vapar_3001 PF01112 Asparaginase Vapar_3002 PF00005 ABC transporter Vapar_3002 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Vapar_3003 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Vapar_3004 PF00528 Binding-protein-dependent transport system inner membrane component Vapar_3005 PF00528 Binding-protein-dependent transport system inner membrane component Vapar_3005 PF12911 N-terminal TM domain of oligopeptide transport permease C Vapar_3006 PF03576 Peptidase family S58 Vapar_3008 PF01970 Tripartite tricarboxylate transporter TctA family Vapar_3010 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_3011 PF00072 Response regulator receiver domain Vapar_3011 PF00486 Transcriptional regulatory protein, C terminal Vapar_3012 PF08521 Two-component sensor kinase N-terminal Vapar_3012 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vapar_3012 PF00512 His Kinase A (phospho-acceptor) domain Vapar_3014 PF03976 Polyphosphate kinase 2 (PPK2) Vapar_3018 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Vapar_3018 PF00037 4Fe-4S binding domain Vapar_3018 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Vapar_3019 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Vapar_3019 PF00037 4Fe-4S binding domain Vapar_3019 PF00384 Molybdopterin oxidoreductase Vapar_3019 PF01568 Molydopterin dinucleotide binding domain Vapar_3019 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Vapar_3020 PF02634 FdhD/NarQ family Vapar_3022 PF01116 Fructose-bisphosphate aldolase class-II Vapar_3023 PF00162 Phosphoglycerate kinase Vapar_3024 PF00456 Transketolase, thiamine diphosphate binding domain Vapar_3024 PF02779 Transketolase, pyrimidine binding domain Vapar_3024 PF02780 Transketolase, C-terminal domain Vapar_3025 PF00485 Phosphoribulokinase / Uridine kinase family Vapar_3026 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain Vapar_3027 PF13419 Haloacid dehalogenase-like hydrolase Vapar_3029 PF13419 Haloacid dehalogenase-like hydrolase Vapar_3030 PF00004 ATPase family associated with various cellular activities (AAA) Vapar_3030 PF17866 AAA lid domain Vapar_3031 PF00101 Ribulose bisphosphate carboxylase, small chain Vapar_3032 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain Vapar_3032 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain Vapar_3033 PF03466 LysR substrate binding domain Vapar_3033 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_3035 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_3039 PF00005 ABC transporter Vapar_3040 PF13360 PQQ-like domain Vapar_3041 PF13442 Cytochrome C oxidase, cbb3-type, subunit III Vapar_3047 PF17863 AAA lid domain Vapar_3047 PF07726 ATPase family associated with various cellular activities (AAA) Vapar_3053 PF13186 Iron-sulfur cluster-binding domain Vapar_3053 PF04055 Radical SAM superfamily Vapar_3054 PF05402 Coenzyme PQQ synthesis protein D (PqqD) Vapar_3055 PF03070 TENA/THI-4/PQQC family Vapar_3056 PF12706 Beta-lactamase superfamily domain Vapar_3057 PF08042 PqqA family Vapar_3058 PF00561 alpha/beta hydrolase fold Vapar_3059 PF05231 MASE1 Vapar_3059 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vapar_3059 PF07730 Histidine kinase Vapar_3060 PF00196 Bacterial regulatory proteins, luxR family Vapar_3060 PF00072 Response regulator receiver domain Vapar_3062 PF00425 chorismate binding enzyme Vapar_3062 PF00117 Glutamine amidotransferase class-I Vapar_3062 PF04715 Anthranilate synthase component I, N terminal region Vapar_3065 PF01913 Formylmethanofuran-tetrahydromethanopterin formyltransferase Vapar_3065 PF02741 FTR, proximal lobe Vapar_3066 PF07969 Amidohydrolase family Vapar_3073 PF04476 4-HFC-P synthase Vapar_3077 PF00158 Sigma-54 interaction domain Vapar_3077 PF01590 GAF domain Vapar_3077 PF02954 Bacterial regulatory protein, Fis family Vapar_3079 PF08714 Formaldehyde-activating enzyme (Fae) Vapar_3082 PF02289 Cyclohydrolase (MCH) Vapar_3084 PF09176 Methylene-tetrahydromethanopterin dehydrogenase, N-terminal Vapar_3086 PF01842 ACT domain Vapar_3086 PF00696 Amino acid kinase family Vapar_3086 PF13840 ACT domain Vapar_3087 PF01171 PP-loop family Vapar_3087 PF09179 TilS substrate binding domain Vapar_3088 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit Vapar_3089 PF02805 Metal binding domain of Ada Vapar_3089 PF06029 AlkA N-terminal domain Vapar_3089 PF00730 HhH-GPD superfamily base excision DNA repair protein Vapar_3089 PF12833 Helix-turn-helix domain Vapar_3090 PF01406 tRNA synthetases class I (C) catalytic domain Vapar_3090 PF09190 DALR domain Vapar_3092 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Vapar_3093 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Vapar_3094 PF00149 Calcineurin-like phosphoesterase Vapar_3095 PF06167 Glucose-regulated metallo-peptidase M90 Vapar_3099 PF01464 Transglycosylase SLT domain Vapar_3099 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain Vapar_3100 PF00464 Serine hydroxymethyltransferase Vapar_3101 PF03477 ATP cone domain Vapar_3103 PF05567 Neisseria PilC beta-propeller domain Vapar_3108 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Vapar_3108 PF01872 RibD C-terminal domain Vapar_3109 PF00677 Lumazine binding domain Vapar_3110 PF00925 GTP cyclohydrolase II Vapar_3110 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase Vapar_3111 PF00885 6,7-dimethyl-8-ribityllumazine synthase Vapar_3112 PF01029 NusB family Vapar_3113 PF00155 Aminotransferase class I and II Vapar_3114 PF03061 Thioesterase superfamily Vapar_3115 PF01618 MotA/TolQ/ExbB proton channel family Vapar_3116 PF02472 Biopolymer transport protein ExbD/TolR Vapar_3118 PF01336 OB-fold nucleic acid binding domain Vapar_3118 PF02811 PHP domain Vapar_3118 PF14579 Helix-hairpin-helix motif Vapar_3118 PF17657 Bacterial DNA polymerase III alpha subunit finger domain Vapar_3118 PF07733 Bacterial DNA polymerase III alpha NTPase domain Vapar_3120 PF02678 Pirin Vapar_3120 PF05726 Pirin C-terminal cupin domain Vapar_3121 PF03358 NADPH-dependent FMN reductase Vapar_3123 PF02678 Pirin Vapar_3123 PF17954 Quercetinase C-terminal cupin domain Vapar_3125 PF01266 FAD dependent oxidoreductase Vapar_3125 PF05430 S-adenosyl-L-methionine-dependent methyltransferase Vapar_3126 PF00749 tRNA synthetases class I (E and Q), catalytic domain Vapar_3127 PF02390 Putative methyltransferase Vapar_3129 PF00027 Cyclic nucleotide-binding domain Vapar_3129 PF13545 Crp-like helix-turn-helix domain Vapar_3131 PF00596 Class II Aldolase and Adducin N-terminal domain Vapar_3132 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_3132 PF03466 LysR substrate binding domain Vapar_3133 PF00890 FAD binding domain Vapar_3133 PF04205 FMN-binding domain Vapar_3133 PF03358 NADPH-dependent FMN reductase Vapar_3135 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_3136 PF01915 Glycosyl hydrolase family 3 C-terminal domain Vapar_3136 PF00933 Glycosyl hydrolase family 3 N terminal domain Vapar_3136 PF14310 Fibronectin type III-like domain Vapar_3140 PF03069 Acetamidase/Formamidase family Vapar_3141 PF00005 ABC transporter Vapar_3142 PF00005 ABC transporter Vapar_3142 PF08402 TOBE domain Vapar_3146 PF00072 Response regulator receiver domain Vapar_3146 PF00512 His Kinase A (phospho-acceptor) domain Vapar_3146 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vapar_3146 PF01627 Hpt domain Vapar_3147 PF00072 Response regulator receiver domain Vapar_3149 PF00360 Phytochrome region Vapar_3149 PF08446 PAS fold Vapar_3149 PF00512 His Kinase A (phospho-acceptor) domain Vapar_3149 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vapar_3149 PF01590 GAF domain Vapar_3152 PF12833 Helix-turn-helix domain Vapar_3156 PF01433 Peptidase family M1 domain Vapar_3156 PF11838 ERAP1-like C-terminal domain Vapar_3157 PF07690 Major Facilitator Superfamily Vapar_3158 PF13609 Gram-negative porin Vapar_3160 PF00355 Rieske [2Fe-2S] domain Vapar_3162 PF01494 FAD binding domain Vapar_3163 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_3165 PF00171 Aldehyde dehydrogenase family Vapar_3166 PF03447 Homoserine dehydrogenase, NAD binding domain Vapar_3166 PF01958 Domain of unknown function DUF108 Vapar_3167 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Vapar_3167 PF00205 Thiamine pyrophosphate enzyme, central domain Vapar_3167 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Vapar_3169 PF01614 Bacterial transcriptional regulator Vapar_3169 PF09339 IclR helix-turn-helix domain Vapar_3173 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_3174 PF01266 FAD dependent oxidoreductase Vapar_3175 PF08546 Ketopantoate reductase PanE/ApbA C terminal Vapar_3175 PF02558 Ketopantoate reductase PanE/ApbA Vapar_3176 PF01411 tRNA synthetases class II (A) Vapar_3176 PF02272 DHHA1 domain Vapar_3176 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Vapar_3184 PF00501 AMP-binding enzyme Vapar_3184 PF00202 Aminotransferase class-III Vapar_3184 PF00550 Phosphopantetheine attachment site Vapar_3184 PF02801 Beta-ketoacyl synthase, C-terminal domain Vapar_3184 PF13193 AMP-binding enzyme C-terminal domain Vapar_3184 PF00668 Condensation domain Vapar_3184 PF16197 Ketoacyl-synthetase C-terminal extension Vapar_3184 PF00109 Beta-ketoacyl synthase, N-terminal domain Vapar_3185 PF00550 Phosphopantetheine attachment site Vapar_3185 PF00668 Condensation domain Vapar_3185 PF13193 AMP-binding enzyme C-terminal domain Vapar_3185 PF00975 Thioesterase domain Vapar_3185 PF00501 AMP-binding enzyme Vapar_3189 PF02563 Polysaccharide biosynthesis/export protein Vapar_3189 PF10531 SLBB domain Vapar_3190 PF13614 AAA domain Vapar_3190 PF02706 Chain length determinant protein Vapar_3190 PF13807 G-rich domain on putative tyrosine kinase Vapar_3191 PF02397 Bacterial sugar transferase Vapar_3192 PF01370 NAD dependent epimerase/dehydratase family Vapar_3198 PF00534 Glycosyl transferases group 1 Vapar_3198 PF13579 Glycosyl transferase 4-like domain Vapar_3199 PF00196 Bacterial regulatory proteins, luxR family Vapar_3199 PF00072 Response regulator receiver domain Vapar_3200 PF01050 Mannose-6-phosphate isomerase Vapar_3200 PF00483 Nucleotidyl transferase Vapar_3204 PF07733 Bacterial DNA polymerase III alpha NTPase domain Vapar_3204 PF02811 PHP domain Vapar_3204 PF14579 Helix-hairpin-helix motif Vapar_3204 PF17657 Bacterial DNA polymerase III alpha subunit finger domain Vapar_3209 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_3210 PF13609 Gram-negative porin Vapar_3213 PF00330 Aconitase family (aconitate hydratase) Vapar_3216 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_3217 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_3219 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase Vapar_3221 PF00072 Response regulator receiver domain Vapar_3221 PF00196 Bacterial regulatory proteins, luxR family Vapar_3223 PF00005 ABC transporter Vapar_3223 PF00664 ABC transporter transmembrane region Vapar_3226 PF01926 50S ribosome-binding GTPase Vapar_3226 PF12631 MnmE helical domain Vapar_3226 PF10396 GTP-binding protein TrmE N-terminus Vapar_3228 PF03006 Haemolysin-III related Vapar_3230 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Vapar_3232 PF01022 Bacterial regulatory protein, arsR family Vapar_3234 PF01066 CDP-alcohol phosphatidyltransferase Vapar_3235 PF00106 short chain dehydrogenase Vapar_3235 PF00300 Histidine phosphatase superfamily (branch 1) Vapar_3236 PF01556 DnaJ C terminal domain Vapar_3236 PF00226 DnaJ domain Vapar_3239 PF00691 OmpA family Vapar_3245 PF03352 Methyladenine glycosylase Vapar_3248 PF08267 Cobalamin-independent synthase, N-terminal domain Vapar_3248 PF01717 Cobalamin-independent synthase, Catalytic domain Vapar_3249 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_3249 PF03466 LysR substrate binding domain Vapar_3250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_3250 PF03466 LysR substrate binding domain Vapar_3251 PF07690 Major Facilitator Superfamily Vapar_3253 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase Vapar_3253 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase Vapar_3254 PF00378 Enoyl-CoA hydratase/isomerase Vapar_3257 PF00171 Aldehyde dehydrogenase family Vapar_3258 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_3258 PF03466 LysR substrate binding domain Vapar_3260 PF02515 CoA-transferase family III Vapar_3261 PF01144 Coenzyme A transferase Vapar_3262 PF01144 Coenzyme A transferase Vapar_3263 PF00072 Response regulator receiver domain Vapar_3263 PF00196 Bacterial regulatory proteins, luxR family Vapar_3265 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_3266 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Vapar_3267 PF00682 HMGL-like Vapar_3268 PF02515 CoA-transferase family III Vapar_3270 PF03466 LysR substrate binding domain Vapar_3270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_3271 PF00171 Aldehyde dehydrogenase family Vapar_3273 PF04349 Periplasmic glucan biosynthesis protein, MdoG Vapar_3274 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase Vapar_3274 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Vapar_3275 PF13520 Amino acid permease Vapar_3276 PF06751 Ethanolamine ammonia lyase large subunit (EutB) Vapar_3277 PF05985 Ethanolamine ammonia-lyase light chain (EutC) Vapar_3282 PF08019 Phosphoethanolamine transferase EptA/EptB Vapar_3282 PF00884 Sulfatase Vapar_3283 PF01569 PAP2 superfamily Vapar_3285 PF00072 Response regulator receiver domain Vapar_3285 PF00486 Transcriptional regulatory protein, C terminal Vapar_3286 PF00512 His Kinase A (phospho-acceptor) domain Vapar_3286 PF08521 Two-component sensor kinase N-terminal Vapar_3286 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vapar_3287 PF03061 Thioesterase superfamily Vapar_3290 PF01968 Hydantoinase/oxoprolinase Vapar_3290 PF05378 Hydantoinase/oxoprolinase N-terminal region Vapar_3292 PF07286 Protein of unknown function (DUF1445) Vapar_3293 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_3293 PF03466 LysR substrate binding domain Vapar_3294 PF01370 NAD dependent epimerase/dehydratase family Vapar_3295 PF03480 Bacterial extracellular solute-binding protein, family 7 Vapar_3297 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Vapar_3299 PF08669 Glycine cleavage T-protein C-terminal barrel domain Vapar_3299 PF01571 Aminomethyltransferase folate-binding domain Vapar_3300 PF01597 Glycine cleavage H-protein Vapar_3301 PF02347 Glycine cleavage system P-protein Vapar_3305 PF03060 Nitronate monooxygenase Vapar_3307 PF03466 LysR substrate binding domain Vapar_3307 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_3309 PF03480 Bacterial extracellular solute-binding protein, family 7 Vapar_3310 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Vapar_3310 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component Vapar_3311 PF00456 Transketolase, thiamine diphosphate binding domain Vapar_3312 PF02780 Transketolase, C-terminal domain Vapar_3312 PF02779 Transketolase, pyrimidine binding domain Vapar_3313 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase Vapar_3313 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase Vapar_3319 PF07690 Major Facilitator Superfamily Vapar_3319 PF00083 Sugar (and other) transporter Vapar_3320 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Vapar_3321 PF00561 alpha/beta hydrolase fold Vapar_3322 PF07690 Major Facilitator Superfamily Vapar_3324 PF10397 Adenylosuccinate lyase C-terminus Vapar_3324 PF00206 Lyase Vapar_3325 PF01488 Shikimate / quinate 5-dehydrogenase Vapar_3325 PF18317 Shikimate 5'-dehydrogenase C-terminal domain Vapar_3325 PF08501 Shikimate dehydrogenase substrate binding domain Vapar_3326 PF03480 Bacterial extracellular solute-binding protein, family 7 Vapar_3327 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Vapar_3328 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component Vapar_3329 PF08501 Shikimate dehydrogenase substrate binding domain Vapar_3329 PF01488 Shikimate / quinate 5-dehydrogenase Vapar_3329 PF18317 Shikimate 5'-dehydrogenase C-terminal domain Vapar_3330 PF01614 Bacterial transcriptional regulator Vapar_3330 PF09339 IclR helix-turn-helix domain Vapar_3331 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_3332 PF00486 Transcriptional regulatory protein, C terminal Vapar_3332 PF00072 Response regulator receiver domain Vapar_3333 PF00512 His Kinase A (phospho-acceptor) domain Vapar_3333 PF08521 Two-component sensor kinase N-terminal Vapar_3333 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vapar_3337 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase Vapar_3337 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase Vapar_3339 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Vapar_3339 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Vapar_3340 PF00107 Zinc-binding dehydrogenase Vapar_3340 PF08240 Alcohol dehydrogenase GroES-like domain Vapar_3341 PF00356 Bacterial regulatory proteins, lacI family Vapar_3341 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family Vapar_3342 PF08450 SMP-30/Gluconolactonase/LRE-like region Vapar_3343 PF00005 ABC transporter Vapar_3344 PF02653 Branched-chain amino acid transport system / permease component Vapar_3347 PF08402 TOBE domain Vapar_3347 PF00005 ABC transporter Vapar_3349 PF00528 Binding-protein-dependent transport system inner membrane component Vapar_3350 PF00528 Binding-protein-dependent transport system inner membrane component Vapar_3352 PF00005 ABC transporter Vapar_3353 PF02653 Branched-chain amino acid transport system / permease component Vapar_3354 PF13407 Periplasmic binding protein domain Vapar_3358 PF01264 Chorismate synthase Vapar_3365 PF08173 Membrane bound YbgT-like protein Vapar_3366 PF02322 Cytochrome bd terminal oxidase subunit II Vapar_3367 PF01654 Cytochrome bd terminal oxidase subunit I Vapar_3368 PF00005 ABC transporter Vapar_3368 PF00664 ABC transporter transmembrane region Vapar_3369 PF00664 ABC transporter transmembrane region Vapar_3369 PF00005 ABC transporter Vapar_3372 PF12806 Acetyl-CoA dehydrogenase C-terminal like Vapar_3372 PF02770 Acyl-CoA dehydrogenase, middle domain Vapar_3372 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Vapar_3372 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Vapar_3373 PF01012 Electron transfer flavoprotein domain Vapar_3373 PF00766 Electron transfer flavoprotein FAD-binding domain Vapar_3374 PF01012 Electron transfer flavoprotein domain Vapar_3375 PF00924 Mechanosensitive ion channel Vapar_3375 PF12795 Mechanosensitive ion channel porin domain Vapar_3375 PF12794 Mechanosensitive ion channel inner membrane domain 1 Vapar_3376 PF00850 Histone deacetylase domain Vapar_3377 PF17863 AAA lid domain Vapar_3377 PF07726 ATPase family associated with various cellular activities (AAA) Vapar_3379 PF13559 Domain of unknown function (DUF4129) Vapar_3379 PF11992 Domain of unknown function (DUF3488) Vapar_3379 PF01841 Transglutaminase-like superfamily Vapar_3380 PF13406 Transglycosylase SLT domain Vapar_3383 PF02801 Beta-ketoacyl synthase, C-terminal domain Vapar_3383 PF00109 Beta-ketoacyl synthase, N-terminal domain Vapar_3386 PF00005 ABC transporter Vapar_3393 PF00528 Binding-protein-dependent transport system inner membrane component Vapar_3394 PF00528 Binding-protein-dependent transport system inner membrane component Vapar_3395 PF17912 MalK OB fold domain Vapar_3395 PF00005 ABC transporter Vapar_3396 PF17912 MalK OB fold domain Vapar_3396 PF00005 ABC transporter Vapar_3396 PF03459 TOBE domain Vapar_3397 PF01266 FAD dependent oxidoreductase Vapar_3397 PF16901 C-terminal domain of alpha-glycerophosphate oxidase Vapar_3398 PF00455 DeoR C terminal sensor domain Vapar_3398 PF08220 DeoR-like helix-turn-helix domain Vapar_3399 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Vapar_3399 PF00370 FGGY family of carbohydrate kinases, N-terminal domain Vapar_3401 PF00884 Sulfatase Vapar_3401 PF08019 Phosphoethanolamine transferase EptA/EptB Vapar_3403 PF14403 Circularly permuted ATP-grasp type 2 Vapar_3404 PF00753 Metallo-beta-lactamase superfamily Vapar_3404 PF03772 Competence protein Vapar_3406 PF14403 Circularly permuted ATP-grasp type 2 Vapar_3406 PF04168 A predicted alpha-helical domain with a conserved ER motif. Vapar_3407 PF08379 Bacterial transglutaminase-like N-terminal region Vapar_3407 PF01841 Transglutaminase-like superfamily Vapar_3410 PF00083 Sugar (and other) transporter Vapar_3412 PF00356 Bacterial regulatory proteins, lacI family Vapar_3413 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Vapar_3413 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Vapar_3414 PF00294 pfkB family carbohydrate kinase Vapar_3416 PF00005 ABC transporter Vapar_3418 PF00528 Binding-protein-dependent transport system inner membrane component Vapar_3419 PF00528 Binding-protein-dependent transport system inner membrane component Vapar_3421 PF00857 Isochorismatase family Vapar_3423 PF12706 Beta-lactamase superfamily domain Vapar_3425 PF00521 DNA gyrase/topoisomerase IV, subunit A Vapar_3427 PF01551 Peptidase family M23 Vapar_3427 PF10145 Phage-related minor tail protein Vapar_3427 PF01464 Transglycosylase SLT domain Vapar_3428 PF00986 DNA gyrase B subunit, carboxyl terminus Vapar_3428 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vapar_3428 PF00204 DNA gyrase B Vapar_3428 PF01751 Toprim domain Vapar_3432 PF00701 Dihydrodipicolinate synthetase family Vapar_3433 PF06804 NlpB/DapX lipoprotein Vapar_3434 PF00753 Metallo-beta-lactamase superfamily Vapar_3437 PF08007 Cupin superfamily protein Vapar_3438 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Vapar_3440 PF00692 dUTPase Vapar_3442 PF04127 DNA / pantothenate metabolism flavoprotein Vapar_3442 PF02441 Flavoprotein Vapar_3443 PF06418 CTP synthase N-terminus Vapar_3443 PF00117 Glutamine amidotransferase class-I Vapar_3444 PF00793 DAHP synthetase I family Vapar_3446 PF00113 Enolase, C-terminal TIM barrel domain Vapar_3446 PF03952 Enolase, N-terminal domain Vapar_3447 PF04977 Septum formation initiator Vapar_3448 PF04973 Nicotinamide mononucleotide transporter Vapar_3451 PF01430 Hsp33 protein Vapar_3452 PF00132 Bacterial transferase hexapeptide (six repeats) Vapar_3453 PF04305 Protein of unknown function (DUF455) Vapar_3455 PF02803 Thiolase, C-terminal domain Vapar_3455 PF00108 Thiolase, N-terminal domain Vapar_3457 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_3458 PF02899 Phage integrase, N-terminal SAM-like domain Vapar_3458 PF00589 Phage integrase family Vapar_3459 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_3461 PF08331 Domain of unknown function (DUF1730) Vapar_3462 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE Vapar_3463 PF11741 AMIN domain Vapar_3463 PF01520 N-acetylmuramoyl-L-alanine amidase Vapar_3465 PF09335 SNARE associated Golgi protein Vapar_3466 PF01119 DNA mismatch repair protein, C-terminal domain Vapar_3466 PF08676 MutL C terminal dimerisation domain Vapar_3469 PF02687 FtsX-like permease family Vapar_3469 PF12704 MacB-like periplasmic core domain Vapar_3469 PF00005 ABC transporter Vapar_3470 PF00291 Pyridoxal-phosphate dependent enzyme Vapar_3472 PF05721 Phytanoyl-CoA dioxygenase (PhyH) Vapar_3474 PF03795 YCII-related domain Vapar_3475 PF04542 Sigma-70 region 2 Vapar_3475 PF08281 Sigma-70, region 4 Vapar_3476 PF00144 Beta-lactamase Vapar_3478 PF01804 Penicillin amidase Vapar_3479 PF00291 Pyridoxal-phosphate dependent enzyme Vapar_3482 PF00149 Calcineurin-like phosphoesterase Vapar_3484 PF02653 Branched-chain amino acid transport system / permease component Vapar_3486 PF00005 ABC transporter Vapar_3487 PF00005 ABC transporter Vapar_3487 PF12399 Branched-chain amino acid ATP-binding cassette transporter Vapar_3489 PF07690 Major Facilitator Superfamily Vapar_3490 PF00529 HlyD membrane-fusion protein of T1SS Vapar_3490 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Vapar_3491 PF02321 Outer membrane efflux protein Vapar_3492 PF01047 MarR family Vapar_3493 PF00664 ABC transporter transmembrane region Vapar_3493 PF00005 ABC transporter Vapar_3495 PF00293 NUDIX domain Vapar_3497 PF00361 Proton-conducting membrane transporter Vapar_3498 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus Vapar_3498 PF00361 Proton-conducting membrane transporter Vapar_3499 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Vapar_3499 PF00361 Proton-conducting membrane transporter Vapar_3500 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L Vapar_3501 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 Vapar_3502 PF12838 4Fe-4S dicluster domain Vapar_3503 PF00146 NADH dehydrogenase Vapar_3504 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Vapar_3504 PF00384 Molybdopterin oxidoreductase Vapar_3504 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal Vapar_3505 PF10531 SLBB domain Vapar_3505 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Vapar_3505 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Vapar_3507 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit Vapar_3508 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit Vapar_3509 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit Vapar_3510 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 Vapar_3511 PF03840 Preprotein translocase SecG subunit Vapar_3512 PF00121 Triosephosphate isomerase Vapar_3513 PF02801 Beta-ketoacyl synthase, C-terminal domain Vapar_3513 PF00109 Beta-ketoacyl synthase, N-terminal domain Vapar_3513 PF14765 Polyketide synthase dehydratase Vapar_3513 PF08659 KR domain Vapar_3513 PF16197 Ketoacyl-synthetase C-terminal extension Vapar_3513 PF00107 Zinc-binding dehydrogenase Vapar_3513 PF00550 Phosphopantetheine attachment site Vapar_3513 PF00698 Acyl transferase domain Vapar_3513 PF08240 Alcohol dehydrogenase GroES-like domain Vapar_3514 PF00575 S1 RNA binding domain Vapar_3514 PF03725 3' exoribonuclease family, domain 2 Vapar_3514 PF01138 3' exoribonuclease family, domain 1 Vapar_3514 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain Vapar_3514 PF00013 KH domain Vapar_3515 PF00312 Ribosomal protein S15 Vapar_3517 PF13458 Periplasmic binding protein Vapar_3520 PF00814 Glycoprotease family Vapar_3521 PF08376 Nitrate and nitrite sensing Vapar_3521 PF03861 ANTAR domain Vapar_3523 PF00528 Binding-protein-dependent transport system inner membrane component Vapar_3524 PF00005 ABC transporter Vapar_3525 PF03861 ANTAR domain Vapar_3525 PF00072 Response regulator receiver domain Vapar_3526 PF07690 Major Facilitator Superfamily Vapar_3527 PF03793 PASTA domain Vapar_3527 PF00069 Protein kinase domain Vapar_3528 PF04324 BFD-like [2Fe-2S] binding domain Vapar_3528 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain Vapar_3528 PF07992 Pyridine nucleotide-disulphide oxidoreductase Vapar_3528 PF01077 Nitrite and sulphite reductase 4Fe-4S domain Vapar_3528 PF18267 Rubredoxin NAD+ reductase C-terminal domain Vapar_3529 PF00355 Rieske [2Fe-2S] domain Vapar_3530 PF04324 BFD-like [2Fe-2S] binding domain Vapar_3530 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Vapar_3530 PF00384 Molybdopterin oxidoreductase Vapar_3530 PF01568 Molydopterin dinucleotide binding domain Vapar_3531 PF00591 Glycosyl transferase family, a/b domain Vapar_3531 PF02885 Glycosyl transferase family, helical bundle domain Vapar_3532 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Vapar_3533 PF08402 TOBE domain Vapar_3533 PF00005 ABC transporter Vapar_3535 PF00528 Binding-protein-dependent transport system inner membrane component Vapar_3536 PF00528 Binding-protein-dependent transport system inner membrane component Vapar_3538 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family Vapar_3540 PF01165 Ribosomal protein S21 Vapar_3541 PF09424 Yqey-like protein Vapar_3542 PF00293 NUDIX domain Vapar_3549 PF00211 Adenylate and Guanylate cyclase catalytic domain Vapar_3549 PF13191 AAA ATPase domain Vapar_3550 PF12833 Helix-turn-helix domain Vapar_3551 PF01557 Fumarylacetoacetate (FAA) hydrolase family Vapar_3552 PF01523 Putative modulator of DNA gyrase Vapar_3553 PF04751 Protein of unknown function (DUF615) Vapar_3554 PF00994 Probable molybdopterin binding domain Vapar_3555 PF00873 AcrB/AcrD/AcrF family Vapar_3556 PF00529 HlyD membrane-fusion protein of T1SS Vapar_3556 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Vapar_3557 PF02321 Outer membrane efflux protein Vapar_3559 PF00486 Transcriptional regulatory protein, C terminal Vapar_3559 PF00072 Response regulator receiver domain Vapar_3560 PF00512 His Kinase A (phospho-acceptor) domain Vapar_3560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vapar_3560 PF00672 HAMP domain Vapar_3561 PF00999 Sodium/hydrogen exchanger family Vapar_3562 PF00403 Heavy-metal-associated domain Vapar_3563 PF13411 MerR HTH family regulatory protein Vapar_3564 PF00132 Bacterial transferase hexapeptide (six repeats) Vapar_3565 PF00588 SpoU rRNA Methylase family Vapar_3566 PF00459 Inositol monophosphatase family Vapar_3567 PF12805 FUSC-like inner membrane protein yccS Vapar_3569 PF01037 Lrp/AsnC ligand binding domain Vapar_3571 PF04235 Protein of unknown function (DUF418) Vapar_3572 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_3572 PF03466 LysR substrate binding domain Vapar_3573 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_3574 PF12802 MarR family Vapar_3575 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_3576 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_3577 PF00884 Sulfatase Vapar_3579 PF00990 Diguanylate cyclase, GGDEF domain Vapar_3579 PF00563 EAL domain Vapar_3579 PF03707 Bacterial signalling protein N terminal repeat Vapar_3582 PF03150 Di-haem cytochrome c peroxidase Vapar_3582 PF00034 Cytochrome c Vapar_3586 PF08021 Siderophore-interacting FAD-binding domain Vapar_3586 PF04954 Siderophore-interacting protein Vapar_3587 PF01544 CorA-like Mg2+ transporter protein Vapar_3589 PF01624 MutS domain I Vapar_3589 PF05188 MutS domain II Vapar_3589 PF05192 MutS domain III Vapar_3589 PF05190 MutS family domain IV Vapar_3589 PF00488 MutS domain V Vapar_3592 PF00072 Response regulator receiver domain Vapar_3592 PF00196 Bacterial regulatory proteins, luxR family Vapar_3594 PF07730 Histidine kinase Vapar_3594 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vapar_3594 PF00672 HAMP domain Vapar_3596 PF00067 Cytochrome P450 Vapar_3597 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_3599 PF02673 Bacitracin resistance protein BacA Vapar_3601 PF00497 Bacterial extracellular solute-binding proteins, family 3 Vapar_3602 PF00202 Aminotransferase class-III Vapar_3603 PF01380 SIS domain Vapar_3603 PF01418 Helix-turn-helix domain, rpiR family Vapar_3605 PF02321 Outer membrane efflux protein Vapar_3606 PF00873 AcrB/AcrD/AcrF family Vapar_3607 PF00873 AcrB/AcrD/AcrF family Vapar_3608 PF13533 Biotin-lipoyl like Vapar_3610 PF04116 Fatty acid hydroxylase superfamily Vapar_3612 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vapar_3612 PF00672 HAMP domain Vapar_3612 PF02743 Cache domain Vapar_3612 PF06580 Histidine kinase Vapar_3613 PF00072 Response regulator receiver domain Vapar_3613 PF04397 LytTr DNA-binding domain Vapar_3615 PF00749 tRNA synthetases class I (E and Q), catalytic domain Vapar_3615 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain Vapar_3620 PF00753 Metallo-beta-lactamase superfamily Vapar_3620 PF10996 Beta-Casp domain Vapar_3620 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain Vapar_3621 PF00909 Ammonium Transporter Family Vapar_3622 PF04397 LytTr DNA-binding domain Vapar_3622 PF00072 Response regulator receiver domain Vapar_3629 PF01926 50S ribosome-binding GTPase Vapar_3631 PF00571 CBS domain Vapar_3631 PF01380 SIS domain Vapar_3633 PF13411 MerR HTH family regulatory protein Vapar_3635 PF00106 short chain dehydrogenase Vapar_3637 PF04262 Glutamate-cysteine ligase Vapar_3639 PF02230 Phospholipase/Carboxylesterase Vapar_3643 PF00378 Enoyl-CoA hydratase/isomerase Vapar_3648 PF05661 Protein of unknown function (DUF808) Vapar_3651 PF09905 DNA-binding protein VF530 Vapar_3652 PF00111 2Fe-2S iron-sulfur cluster binding domain Vapar_3654 PF00849 RNA pseudouridylate synthase Vapar_3655 PF00582 Universal stress protein family Vapar_3658 PF00665 Integrase core domain Vapar_3659 PF10017 Histidine-specific methyltransferase, SAM-dependent Vapar_3660 PF03781 Sulfatase-modifying factor enzyme 1 Vapar_3660 PF12867 DinB superfamily Vapar_3661 PF07992 Pyridine nucleotide-disulphide oxidoreductase Vapar_3662 PF00565 Staphylococcal nuclease homologue Vapar_3663 PF00501 AMP-binding enzyme Vapar_3663 PF13193 AMP-binding enzyme C-terminal domain Vapar_3664 PF02566 OsmC-like protein Vapar_3665 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_3667 PF00497 Bacterial extracellular solute-binding proteins, family 3 Vapar_3668 PF00528 Binding-protein-dependent transport system inner membrane component Vapar_3669 PF00528 Binding-protein-dependent transport system inner membrane component Vapar_3670 PF00005 ABC transporter Vapar_3673 PF03009 Glycerophosphoryl diester phosphodiesterase family Vapar_3676 PF01266 FAD dependent oxidoreductase Vapar_3677 PF03576 Peptidase family S58 Vapar_3681 PF00005 ABC transporter Vapar_3681 PF12848 ABC transporter Vapar_3682 PF00271 Helicase conserved C-terminal domain Vapar_3682 PF00270 DEAD/DEAH box helicase Vapar_3684 PF00005 ABC transporter Vapar_3684 PF17912 MalK OB fold domain Vapar_3684 PF03459 TOBE domain Vapar_3685 PF00528 Binding-protein-dependent transport system inner membrane component Vapar_3686 PF00528 Binding-protein-dependent transport system inner membrane component Vapar_3688 PF07729 FCD domain Vapar_3688 PF00392 Bacterial regulatory proteins, gntR family Vapar_3689 PF00920 Dehydratase family Vapar_3691 PF01081 KDPG and KHG aldolase Vapar_3692 PF00596 Class II Aldolase and Adducin N-terminal domain Vapar_3699 PF13416 Bacterial extracellular solute-binding protein Vapar_3701 PF08402 TOBE domain Vapar_3701 PF00005 ABC transporter Vapar_3703 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Vapar_3705 PF01757 Acyltransferase family Vapar_3707 PF01081 KDPG and KHG aldolase Vapar_3708 PF00920 Dehydratase family Vapar_3712 PF12804 MobA-like NTP transferase domain Vapar_3712 PF00132 Bacterial transferase hexapeptide (six repeats) Vapar_3713 PF01243 Pyridoxamine 5'-phosphate oxidase Vapar_3713 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region Vapar_3716 PF03547 Membrane transport protein Vapar_3719 PF01625 Peptide methionine sulfoxide reductase Vapar_3720 PF17922 Tetracyclin repressor-like, C-terminal domain Vapar_3720 PF00440 Bacterial regulatory proteins, tetR family Vapar_3724 PF00534 Glycosyl transferases group 1 Vapar_3724 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) Vapar_3725 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Vapar_3725 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Vapar_3725 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Vapar_3725 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Vapar_3726 PF12833 Helix-turn-helix domain Vapar_3726 PF02805 Metal binding domain of Ada Vapar_3727 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain Vapar_3727 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain Vapar_3728 PF00892 EamA-like transporter family Vapar_3732 PF02798 Glutathione S-transferase, N-terminal domain Vapar_3736 PF00664 ABC transporter transmembrane region Vapar_3736 PF00005 ABC transporter Vapar_3738 PF00551 Formyl transferase Vapar_3740 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) Vapar_3741 PF07715 TonB-dependent Receptor Plug Domain Vapar_3741 PF00593 TonB dependent receptor Vapar_3742 PF00550 Phosphopantetheine attachment site Vapar_3742 PF00975 Thioesterase domain Vapar_3742 PF00501 AMP-binding enzyme Vapar_3742 PF00668 Condensation domain Vapar_3742 PF13193 AMP-binding enzyme C-terminal domain Vapar_3743 PF13193 AMP-binding enzyme C-terminal domain Vapar_3743 PF00668 Condensation domain Vapar_3743 PF00501 AMP-binding enzyme Vapar_3743 PF00550 Phosphopantetheine attachment site Vapar_3744 PF00501 AMP-binding enzyme Vapar_3744 PF13193 AMP-binding enzyme C-terminal domain Vapar_3744 PF00668 Condensation domain Vapar_3744 PF00550 Phosphopantetheine attachment site Vapar_3745 PF00550 Phosphopantetheine attachment site Vapar_3745 PF00109 Beta-ketoacyl synthase, N-terminal domain Vapar_3745 PF16197 Ketoacyl-synthetase C-terminal extension Vapar_3745 PF00668 Condensation domain Vapar_3745 PF00698 Acyl transferase domain Vapar_3745 PF02801 Beta-ketoacyl synthase, C-terminal domain Vapar_3746 PF00501 AMP-binding enzyme Vapar_3746 PF13193 AMP-binding enzyme C-terminal domain Vapar_3746 PF00668 Condensation domain Vapar_3746 PF00550 Phosphopantetheine attachment site Vapar_3747 PF02668 Taurine catabolism dioxygenase TauD, TfdA family Vapar_3749 PF00975 Thioesterase domain Vapar_3750 PF03621 MbtH-like protein Vapar_3755 PF07687 Peptidase dimerisation domain Vapar_3755 PF01546 Peptidase family M20/M25/M40 Vapar_3756 PF01569 PAP2 superfamily Vapar_3757 PF00749 tRNA synthetases class I (E and Q), catalytic domain Vapar_3758 PF01053 Cys/Met metabolism PLP-dependent enzyme Vapar_3759 PF00156 Phosphoribosyl transferase domain Vapar_3762 PF08245 Mur ligase middle domain Vapar_3762 PF02875 Mur ligase family, glutamate ligase domain Vapar_3763 PF03960 ArsC family Vapar_3765 PF06865 Pyrimidine/purine nucleoside phosphorylase Vapar_3766 PF00764 Arginosuccinate synthase Vapar_3768 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain Vapar_3768 PF01565 FAD binding domain Vapar_3769 PF04461 Protein of unknown function (DUF520) Vapar_3771 PF01042 Endoribonuclease L-PSP Vapar_3772 PF02660 Glycerol-3-phosphate acyltransferase Vapar_3773 PF04073 Aminoacyl-tRNA editing domain Vapar_3774 PF00248 Aldo/keto reductase family Vapar_3775 PF00561 alpha/beta hydrolase fold Vapar_3778 PF04717 Type VI secretion system, phage-baseplate injector Vapar_3786 PF03180 NLPA lipoprotein Vapar_3787 PF00528 Binding-protein-dependent transport system inner membrane component Vapar_3788 PF00005 ABC transporter Vapar_3788 PF09383 NIL domain Vapar_3789 PF03180 NLPA lipoprotein Vapar_3792 PF13419 Haloacid dehalogenase-like hydrolase Vapar_3793 PF01433 Peptidase family M1 domain Vapar_3793 PF17432 Domain of unknown function (DUF3458_C) ARM repeats Vapar_3793 PF11940 Domain of unknown function (DUF3458) Ig-like fold Vapar_3795 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain Vapar_3805 PF13356 Arm DNA-binding domain Vapar_3805 PF00589 Phage integrase family Vapar_3808 PF01515 Phosphate acetyl/butaryl transferase Vapar_3810 PF10518 TAT (twin-arginine translocation) pathway signal sequence Vapar_3810 PF00111 2Fe-2S iron-sulfur cluster binding domain Vapar_3810 PF01799 [2Fe-2S] binding domain Vapar_3811 PF03450 CO dehydrogenase flavoprotein C-terminal domain Vapar_3811 PF00941 FAD binding domain in molybdopterin dehydrogenase Vapar_3812 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Vapar_3812 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase Vapar_3813 PF04976 DMSO reductase anchor subunit (DmsC) Vapar_3814 PF12800 4Fe-4S binding domain Vapar_3814 PF13247 4Fe-4S dicluster domain Vapar_3815 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Vapar_3815 PF00384 Molybdopterin oxidoreductase Vapar_3815 PF01568 Molydopterin dinucleotide binding domain Vapar_3816 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_3816 PF03466 LysR substrate binding domain Vapar_3817 PF00392 Bacterial regulatory proteins, gntR family Vapar_3817 PF07702 UTRA domain Vapar_3818 PF08666 SAF domain Vapar_3819 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus Vapar_3820 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Vapar_3820 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Vapar_3821 PF02615 Malate/L-lactate dehydrogenase Vapar_3823 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_3824 PF00871 Acetokinase family Vapar_3825 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Vapar_3825 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Vapar_3825 PF00205 Thiamine pyrophosphate enzyme, central domain Vapar_3826 PF01614 Bacterial transcriptional regulator Vapar_3826 PF09339 IclR helix-turn-helix domain Vapar_3827 PF12556 Cobaltochelatase CobS subunit N terminal Vapar_3827 PF08406 CbbQ/NirQ/NorQ C-terminal Vapar_3827 PF07728 AAA domain (dynein-related subfamily) Vapar_3828 PF06213 Cobalamin biosynthesis protein CobT Vapar_3828 PF11775 Cobalamin biosynthesis protein CobT VWA domain Vapar_3830 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_3831 PF00171 Aldehyde dehydrogenase family Vapar_3832 PF00501 AMP-binding enzyme Vapar_3832 PF13193 AMP-binding enzyme C-terminal domain Vapar_3835 PF09339 IclR helix-turn-helix domain Vapar_3835 PF01614 Bacterial transcriptional regulator Vapar_3836 PF00732 GMC oxidoreductase Vapar_3836 PF05199 GMC oxidoreductase Vapar_3837 PF00083 Sugar (and other) transporter Vapar_3838 PF00196 Bacterial regulatory proteins, luxR family Vapar_3838 PF03472 Autoinducer binding domain Vapar_3840 PF00111 2Fe-2S iron-sulfur cluster binding domain Vapar_3840 PF01799 [2Fe-2S] binding domain Vapar_3841 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase Vapar_3842 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase Vapar_3842 PF13442 Cytochrome C oxidase, cbb3-type, subunit III Vapar_3842 PF00034 Cytochrome c Vapar_3843 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_3843 PF03466 LysR substrate binding domain Vapar_3844 PF00528 Binding-protein-dependent transport system inner membrane component Vapar_3846 PF04069 Substrate binding domain of ABC-type glycine betaine transport system Vapar_3847 PF00665 Integrase core domain Vapar_3848 PF00155 Aminotransferase class I and II Vapar_3848 PF00392 Bacterial regulatory proteins, gntR family Vapar_3853 PF12951 Passenger-associated-transport-repeat Vapar_3855 PF00571 CBS domain Vapar_3855 PF03471 Transporter associated domain Vapar_3855 PF01595 Cyclin M transmembrane N-terminal domain Vapar_3856 PF00149 Calcineurin-like phosphoesterase Vapar_3858 PF00155 Aminotransferase class I and II Vapar_3858 PF00392 Bacterial regulatory proteins, gntR family Vapar_3859 PF04717 Type VI secretion system, phage-baseplate injector Vapar_3865 PF09084 NMT1/THI5 like Vapar_3867 PF00005 ABC transporter Vapar_3868 PF00528 Binding-protein-dependent transport system inner membrane component Vapar_3869 PF09084 NMT1/THI5 like Vapar_3870 PF00596 Class II Aldolase and Adducin N-terminal domain Vapar_3871 PF00296 Luciferase-like monooxygenase Vapar_3873 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Vapar_3873 PF08028 Acyl-CoA dehydrogenase, C-terminal domain Vapar_3873 PF02770 Acyl-CoA dehydrogenase, middle domain Vapar_3874 PF09084 NMT1/THI5 like Vapar_3875 PF05995 Cysteine dioxygenase type I Vapar_3878 PF00271 Helicase conserved C-terminal domain Vapar_3878 PF00270 DEAD/DEAH box helicase Vapar_3879 PF04228 Putative neutral zinc metallopeptidase Vapar_3880 PF00692 dUTPase Vapar_3881 PF01979 Amidohydrolase family Vapar_3882 PF02608 ABC transporter substrate-binding protein PnrA-like Vapar_3883 PF01804 Penicillin amidase Vapar_3884 PF02311 AraC-like ligand binding domain Vapar_3884 PF12833 Helix-turn-helix domain Vapar_3885 PF03466 LysR substrate binding domain Vapar_3885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_3886 PF07690 Major Facilitator Superfamily Vapar_3887 PF00962 Adenosine/AMP deaminase Vapar_3888 PF00034 Cytochrome c Vapar_3889 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_3889 PF03466 LysR substrate binding domain Vapar_3890 PF00107 Zinc-binding dehydrogenase Vapar_3890 PF08240 Alcohol dehydrogenase GroES-like domain Vapar_3892 PF01965 DJ-1/PfpI family Vapar_3893 PF01965 DJ-1/PfpI family Vapar_3894 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_3895 PF04909 Amidohydrolase Vapar_3896 PF02515 CoA-transferase family III Vapar_3897 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_3898 PF03328 HpcH/HpaI aldolase/citrate lyase family Vapar_3899 PF03466 LysR substrate binding domain Vapar_3899 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_3900 PF02608 ABC transporter substrate-binding protein PnrA-like Vapar_3904 PF00860 Permease family Vapar_3905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_3905 PF03466 LysR substrate binding domain Vapar_3906 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase Vapar_3906 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Vapar_3907 PF00111 2Fe-2S iron-sulfur cluster binding domain Vapar_3907 PF01799 [2Fe-2S] binding domain Vapar_3909 PF03466 LysR substrate binding domain Vapar_3909 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_3912 PF01070 FMN-dependent dehydrogenase Vapar_3915 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Vapar_3919 PF00690 Cation transporter/ATPase, N-terminus Vapar_3919 PF00689 Cation transporting ATPase, C-terminus Vapar_3920 PF00171 Aldehyde dehydrogenase family Vapar_3921 PF05161 MOFRL family Vapar_3921 PF13660 Domain of unknown function (DUF4147) Vapar_3925 PF00576 HIUase/Transthyretin family Vapar_3926 PF07729 FCD domain Vapar_3926 PF00392 Bacterial regulatory proteins, gntR family Vapar_3928 PF07687 Peptidase dimerisation domain Vapar_3928 PF01546 Peptidase family M20/M25/M40 Vapar_3929 PF07687 Peptidase dimerisation domain Vapar_3929 PF01546 Peptidase family M20/M25/M40 Vapar_3930 PF00561 alpha/beta hydrolase fold Vapar_3932 PF00497 Bacterial extracellular solute-binding proteins, family 3 Vapar_3935 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin Vapar_3936 PF01177 Asp/Glu/Hydantoin racemase Vapar_3938 PF00440 Bacterial regulatory proteins, tetR family Vapar_3939 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family Vapar_3941 PF00860 Permease family Vapar_3942 PF00248 Aldo/keto reductase family Vapar_3943 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vapar_3943 PF00989 PAS fold Vapar_3943 PF00512 His Kinase A (phospho-acceptor) domain Vapar_3944 PF00196 Bacterial regulatory proteins, luxR family Vapar_3944 PF00072 Response regulator receiver domain Vapar_3945 PF00083 Sugar (and other) transporter Vapar_3947 PF00535 Glycosyl transferase family 2 Vapar_3948 PF00375 Sodium:dicarboxylate symporter family Vapar_3950 PF01594 AI-2E family transporter Vapar_3953 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_3953 PF03466 LysR substrate binding domain Vapar_3954 PF00205 Thiamine pyrophosphate enzyme, central domain Vapar_3954 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Vapar_3954 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Vapar_3955 PF01261 Xylose isomerase-like TIM barrel Vapar_3956 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase Vapar_3956 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase Vapar_3957 PF04820 Tryptophan halogenase Vapar_3958 PF00390 Malic enzyme, N-terminal domain Vapar_3958 PF03949 Malic enzyme, NAD binding domain Vapar_3958 PF01515 Phosphate acetyl/butaryl transferase Vapar_3960 PF00005 ABC transporter Vapar_3961 PF00528 Binding-protein-dependent transport system inner membrane component Vapar_3966 PF01037 Lrp/AsnC ligand binding domain Vapar_3967 PF01266 FAD dependent oxidoreductase Vapar_3968 PF00355 Rieske [2Fe-2S] domain Vapar_3970 PF14437 MafB19-like deaminase Vapar_3971 PF01774 UreD urease accessory protein Vapar_3972 PF03466 LysR substrate binding domain Vapar_3972 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_3975 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_3976 PF01053 Cys/Met metabolism PLP-dependent enzyme Vapar_3980 PF00593 TonB dependent receptor Vapar_3980 PF07715 TonB-dependent Receptor Plug Domain Vapar_3981 PF04328 Selenoprotein, putative Vapar_3982 PF02554 Carbon starvation protein CstA Vapar_3982 PF13722 5TM C-terminal transporter carbon starvation CstA Vapar_3984 PF00877 NlpC/P60 family Vapar_3992 PF00196 Bacterial regulatory proteins, luxR family Vapar_3992 PF00072 Response regulator receiver domain Vapar_3993 PF17200 Single Cache domain 2 Vapar_3993 PF07730 Histidine kinase Vapar_3996 PF00248 Aldo/keto reductase family Vapar_3997 PF09423 PhoD-like phosphatase Vapar_3997 PF16655 PhoD-like phosphatase, N-terminal domain Vapar_3998 PF03009 Glycerophosphoryl diester phosphodiesterase family Vapar_3999 PF00528 Binding-protein-dependent transport system inner membrane component Vapar_4000 PF00528 Binding-protein-dependent transport system inner membrane component Vapar_4001 PF13416 Bacterial extracellular solute-binding protein Vapar_4003 PF04198 Putative sugar-binding domain Vapar_4003 PF00325 Bacterial regulatory proteins, crp family Vapar_4005 PF08281 Sigma-70, region 4 Vapar_4005 PF04542 Sigma-70 region 2 Vapar_4007 PF07690 Major Facilitator Superfamily Vapar_4008 PF00005 ABC transporter Vapar_4009 PF00005 ABC transporter Vapar_4009 PF12399 Branched-chain amino acid ATP-binding cassette transporter Vapar_4010 PF02653 Branched-chain amino acid transport system / permease component Vapar_4011 PF02653 Branched-chain amino acid transport system / permease component Vapar_4015 PF07690 Major Facilitator Superfamily Vapar_4019 PF03976 Polyphosphate kinase 2 (PPK2) Vapar_4021 PF02811 PHP domain Vapar_4023 PF01300 Telomere recombination Vapar_4024 PF02163 Peptidase family M50 Vapar_4025 PF00579 tRNA synthetases class I (W and Y) Vapar_4026 PF00196 Bacterial regulatory proteins, luxR family Vapar_4026 PF00072 Response regulator receiver domain Vapar_4027 PF18698 Histidine kinase sensor domain Vapar_4027 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vapar_4027 PF00672 HAMP domain Vapar_4027 PF00512 His Kinase A (phospho-acceptor) domain Vapar_4028 PF02403 Seryl-tRNA synthetase N-terminal domain Vapar_4028 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Vapar_4030 PF13291 ACT domain Vapar_4030 PF00291 Pyridoxal-phosphate dependent enzyme Vapar_4031 PF02401 LytB protein Vapar_4032 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Vapar_4033 PF04002 RadC-like JAB domain Vapar_4034 PF01713 Smr domain Vapar_4035 PF07992 Pyridine nucleotide-disulphide oxidoreductase Vapar_4035 PF14759 Reductase C-terminal Vapar_4037 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase Vapar_4037 PF12241 Trans-2-enoyl-CoA reductase catalytic region Vapar_4037 PF07055 Enoyl reductase FAD binding domain Vapar_4038 PF00497 Bacterial extracellular solute-binding proteins, family 3 Vapar_4039 PF00528 Binding-protein-dependent transport system inner membrane component Vapar_4040 PF00528 Binding-protein-dependent transport system inner membrane component Vapar_4041 PF00005 ABC transporter Vapar_4042 PF03171 2OG-Fe(II) oxygenase superfamily Vapar_4042 PF14226 non-haem dioxygenase in morphine synthesis N-terminal Vapar_4044 PF13419 Haloacid dehalogenase-like hydrolase Vapar_4045 PF00083 Sugar (and other) transporter Vapar_4045 PF07690 Major Facilitator Superfamily Vapar_4046 PF06481 COX Aromatic Rich Motif Vapar_4046 PF00116 Cytochrome C oxidase subunit II, periplasmic domain Vapar_4047 PF00115 Cytochrome C and Quinol oxidase polypeptide I Vapar_4048 PF00510 Cytochrome c oxidase subunit III Vapar_4049 PF03626 Prokaryotic Cytochrome C oxidase subunit IV Vapar_4051 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vapar_4051 PF00512 His Kinase A (phospho-acceptor) domain Vapar_4052 PF00072 Response regulator receiver domain Vapar_4053 PF03006 Haemolysin-III related Vapar_4057 PF02634 FdhD/NarQ family Vapar_4061 PF13247 4Fe-4S dicluster domain Vapar_4062 PF00384 Molybdopterin oxidoreductase Vapar_4062 PF01568 Molydopterin dinucleotide binding domain Vapar_4062 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Vapar_4065 PF08331 Domain of unknown function (DUF1730) Vapar_4068 PF03459 TOBE domain Vapar_4068 PF00005 ABC transporter Vapar_4070 PF00528 Binding-protein-dependent transport system inner membrane component Vapar_4071 PF03459 TOBE domain Vapar_4071 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_4072 PF01568 Molydopterin dinucleotide binding domain Vapar_4072 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Vapar_4072 PF00384 Molybdopterin oxidoreductase Vapar_4073 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Vapar_4073 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Vapar_4073 PF10531 SLBB domain Vapar_4074 PF03466 LysR substrate binding domain Vapar_4074 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_4075 PF10609 NUBPL iron-transfer P-loop NTPase Vapar_4077 PF04337 Protein of unknown function, DUF480 Vapar_4078 PF09992 Phosphodiester glycosidase Vapar_4079 PF18324 Hypothetical protein TT1725 Vapar_4079 PF00180 Isocitrate/isopropylmalate dehydrogenase Vapar_4080 PF00132 Bacterial transferase hexapeptide (six repeats) Vapar_4080 PF14602 Hexapeptide repeat of succinyl-transferase Vapar_4080 PF12804 MobA-like NTP transferase domain Vapar_4081 PF09334 tRNA synthetases class I (M) Vapar_4081 PF01588 Putative tRNA binding domain Vapar_4082 PF07729 FCD domain Vapar_4082 PF00392 Bacterial regulatory proteins, gntR family Vapar_4085 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_4086 PF02515 CoA-transferase family III Vapar_4088 PF01740 STAS domain Vapar_4088 PF00916 Sulfate permease family Vapar_4091 PF02616 Segregation and condensation protein ScpA Vapar_4092 PF02910 Fumarate reductase flavoprotein C-term Vapar_4092 PF00890 FAD binding domain Vapar_4093 PF02548 Ketopantoate hydroxymethyltransferase Vapar_4094 PF02569 Pantoate-beta-alanine ligase Vapar_4097 PF02445 Quinolinate synthetase A protein Vapar_4098 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain Vapar_4098 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain Vapar_4099 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Vapar_4099 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus Vapar_4100 PF02556 Preprotein translocase subunit SecB Vapar_4101 PF00462 Glutaredoxin Vapar_4102 PF00581 Rhodanese-like domain Vapar_4103 PF00300 Histidine phosphatase superfamily (branch 1) Vapar_4104 PF13180 PDZ domain Vapar_4104 PF03572 Peptidase family S41 Vapar_4105 PF00899 ThiF family Vapar_4106 PF05170 AsmA family Vapar_4108 PF00072 Response regulator receiver domain Vapar_4108 PF00196 Bacterial regulatory proteins, luxR family Vapar_4109 PF05231 MASE1 Vapar_4109 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vapar_4109 PF07730 Histidine kinase Vapar_4115 PF04972 BON domain Vapar_4117 PF00893 Small Multidrug Resistance protein Vapar_4119 PF01227 GTP cyclohydrolase I Vapar_4120 PF03372 Endonuclease/Exonuclease/phosphatase family Vapar_4121 PF00293 NUDIX domain Vapar_4122 PF02938 GAD domain Vapar_4122 PF01336 OB-fold nucleic acid binding domain Vapar_4122 PF00152 tRNA synthetases class II (D, K and N) Vapar_4125 PF00474 Sodium:solute symporter family Vapar_4126 PF03109 ABC1 family Vapar_4129 PF01209 ubiE/COQ5 methyltransferase family Vapar_4133 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Vapar_4133 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Vapar_4134 PF13416 Bacterial extracellular solute-binding protein Vapar_4135 PF00528 Binding-protein-dependent transport system inner membrane component Vapar_4136 PF00528 Binding-protein-dependent transport system inner membrane component Vapar_4137 PF17912 MalK OB fold domain Vapar_4137 PF00005 ABC transporter Vapar_4138 PF03009 Glycerophosphoryl diester phosphodiesterase family Vapar_4139 PF12794 Mechanosensitive ion channel inner membrane domain 1 Vapar_4139 PF00924 Mechanosensitive ion channel Vapar_4139 PF12795 Mechanosensitive ion channel porin domain Vapar_4140 PF01312 FlhB HrpN YscU SpaS Family Vapar_4141 PF00771 FHIPEP family Vapar_4142 PF00448 SRP54-type protein, GTPase domain Vapar_4144 PF04545 Sigma-70, region 4 Vapar_4144 PF04542 Sigma-70 region 2 Vapar_4144 PF04539 Sigma-70 region 3 Vapar_4148 PF00583 Acetyltransferase (GNAT) family Vapar_4150 PF04344 Chemotaxis phosphatase, CheZ Vapar_4151 PF00072 Response regulator receiver domain Vapar_4152 PF00072 Response regulator receiver domain Vapar_4152 PF01339 CheB methylesterase Vapar_4154 PF03705 CheR methyltransferase, all-alpha domain Vapar_4154 PF01739 CheR methyltransferase, SAM binding domain Vapar_4155 PF00563 EAL domain Vapar_4155 PF08668 HDOD domain Vapar_4156 PF01584 CheW-like domain Vapar_4156 PF02895 Signal transducing histidine kinase, homodimeric domain Vapar_4156 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vapar_4156 PF01627 Hpt domain Vapar_4156 PF09078 CheY binding Vapar_4157 PF13677 Membrane MotB of proton-channel complex MotA/MotB Vapar_4157 PF00691 OmpA family Vapar_4158 PF01618 MotA/TolQ/ExbB proton channel family Vapar_4159 PF05280 Flagellar transcriptional activator (FlhC) Vapar_4160 PF05247 Flagellar transcriptional activator (FlhD) Vapar_4164 PF02561 Flagellar protein FliS Vapar_4165 PF02465 Flagellar hook-associated protein 2 N-terminus Vapar_4165 PF07195 Flagellar hook-associated protein 2 C-terminus Vapar_4166 PF08884 Flagellin D3 domain Vapar_4166 PF00700 Bacterial flagellin C-terminal helical region Vapar_4166 PF00669 Bacterial flagellin N-terminal helical region Vapar_4168 PF08345 Flagellar M-ring protein C-terminal Vapar_4168 PF01514 Secretory protein of YscJ/FliF family Vapar_4169 PF14842 FliG N-terminal domain Vapar_4169 PF14841 FliG middle domain Vapar_4169 PF01706 FliG C-terminal domain Vapar_4170 PF02108 Flagellar assembly protein FliH Vapar_4171 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Vapar_4171 PF18269 T3SS EscN ATPase C-terminal domain Vapar_4172 PF02050 Flagellar FliJ protein Vapar_4174 PF03748 Flagellar basal body-associated protein FliL Vapar_4175 PF02154 Flagellar motor switch protein FliM Vapar_4175 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term Vapar_4176 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term Vapar_4177 PF04347 Flagellar biosynthesis protein, FliO Vapar_4178 PF00813 FliP family Vapar_4179 PF01313 Bacterial export proteins, family 3 Vapar_4180 PF01311 Bacterial export proteins, family 1 Vapar_4181 PF00669 Bacterial flagellin N-terminal helical region Vapar_4182 PF00460 Flagella basal body rod protein Vapar_4182 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Vapar_4183 PF02203 Tar ligand binding domain homologue Vapar_4183 PF00672 HAMP domain Vapar_4183 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Vapar_4184 PF02203 Tar ligand binding domain homologue Vapar_4184 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Vapar_4184 PF00672 HAMP domain Vapar_4185 PF02203 Tar ligand binding domain homologue Vapar_4185 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Vapar_4185 PF00672 HAMP domain Vapar_4186 PF00672 HAMP domain Vapar_4186 PF02203 Tar ligand binding domain homologue Vapar_4186 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Vapar_4187 PF01584 CheW-like domain Vapar_4188 PF00672 HAMP domain Vapar_4188 PF17200 Single Cache domain 2 Vapar_4188 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Vapar_4189 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Vapar_4189 PF00672 HAMP domain Vapar_4189 PF02203 Tar ligand binding domain homologue Vapar_4190 PF01584 CheW-like domain Vapar_4191 PF10135 Rod binding protein Vapar_4191 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase Vapar_4193 PF02107 Flagellar L-ring protein Vapar_4194 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Vapar_4194 PF00460 Flagella basal body rod protein Vapar_4195 PF00460 Flagella basal body rod protein Vapar_4195 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Vapar_4196 PF07559 Flagellar basal body protein FlaE Vapar_4196 PF00460 Flagella basal body rod protein Vapar_4196 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Vapar_4197 PF13861 FlgD Tudor-like domain Vapar_4197 PF13860 FlgD Ig-like domain Vapar_4197 PF03963 Flagellar hook capping protein - N-terminal region Vapar_4198 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Vapar_4198 PF00460 Flagella basal body rod protein Vapar_4199 PF00460 Flagella basal body rod protein Vapar_4205 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain Vapar_4205 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain Vapar_4205 PF01488 Shikimate / quinate 5-dehydrogenase Vapar_4206 PF03462 PCRF domain Vapar_4206 PF00472 RF-1 domain Vapar_4207 PF17827 PrmC N-terminal domain Vapar_4207 PF05175 Methyltransferase small domain Vapar_4208 PF00462 Glutaredoxin Vapar_4210 PF00571 CBS domain Vapar_4210 PF01595 Cyclin M transmembrane N-terminal domain Vapar_4210 PF03471 Transporter associated domain Vapar_4211 PF01464 Transglycosylase SLT domain Vapar_4211 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain Vapar_4212 PF04073 Aminoacyl-tRNA editing domain Vapar_4212 PF03129 Anticodon binding domain Vapar_4212 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Vapar_4213 PF00293 NUDIX domain Vapar_4215 PF01472 PUA domain Vapar_4215 PF00696 Amino acid kinase family Vapar_4216 PF01926 50S ribosome-binding GTPase Vapar_4216 PF01018 GTP1/OBG Vapar_4217 PF01016 Ribosomal L27 protein Vapar_4218 PF00829 Ribosomal prokaryotic L21 protein Vapar_4219 PF00348 Polyprenyl synthetase Vapar_4220 PF00437 Type II/IV secretion system protein Vapar_4220 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain Vapar_4221 PF00482 Type II secretion system (T2SS), protein F Vapar_4222 PF06750 Bacterial Peptidase A24 N-terminal domain Vapar_4222 PF01478 Type IV leader peptidase family Vapar_4223 PF01121 Dephospho-CoA kinase Vapar_4224 PF03062 MBOAT, membrane-bound O-acyltransferase family Vapar_4226 PF07072 Cell division protein Vapar_4227 PF03884 DNA gyrase inhibitor YacG Vapar_4228 PF01757 Acyltransferase family Vapar_4229 PF00293 NUDIX domain Vapar_4231 PF01960 ArgJ family Vapar_4232 PF01043 SecA preprotein cross-linking domain Vapar_4232 PF07516 SecA Wing and Scaffold domain Vapar_4232 PF02810 SEC-C motif Vapar_4232 PF07517 SecA DEAD-like domain Vapar_4234 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_4235 PF00291 Pyridoxal-phosphate dependent enzyme Vapar_4236 PF03466 LysR substrate binding domain Vapar_4236 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_4238 PF00072 Response regulator receiver domain Vapar_4239 PF00072 Response regulator receiver domain Vapar_4239 PF01627 Hpt domain Vapar_4239 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vapar_4239 PF00512 His Kinase A (phospho-acceptor) domain Vapar_4240 PF00547 Urease, gamma subunit Vapar_4242 PF00699 Urease beta subunit Vapar_4243 PF01979 Amidohydrolase family Vapar_4243 PF00449 Urease alpha-subunit, N-terminal domain Vapar_4246 PF02814 UreE urease accessory protein, N-terminal domain Vapar_4246 PF05194 UreE urease accessory protein, C-terminal domain Vapar_4247 PF01730 UreF Vapar_4248 PF02492 CobW/HypB/UreG, nucleotide-binding domain Vapar_4252 PF13609 Gram-negative porin Vapar_4254 PF01103 Surface antigen Vapar_4254 PF07244 Surface antigen variable number repeat Vapar_4255 PF00072 Response regulator receiver domain Vapar_4255 PF00486 Transcriptional regulatory protein, C terminal Vapar_4258 PF00672 HAMP domain Vapar_4258 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vapar_4258 PF00512 His Kinase A (phospho-acceptor) domain Vapar_4259 PF00486 Transcriptional regulatory protein, C terminal Vapar_4259 PF00072 Response regulator receiver domain Vapar_4261 PF05170 AsmA family Vapar_4266 PF00216 Bacterial DNA-binding protein Vapar_4267 PF02321 Outer membrane efflux protein Vapar_4271 PF00378 Enoyl-CoA hydratase/isomerase Vapar_4272 PF02515 CoA-transferase family III Vapar_4274 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_4274 PF03466 LysR substrate binding domain Vapar_4275 PF07729 FCD domain Vapar_4275 PF00392 Bacterial regulatory proteins, gntR family Vapar_4276 PF01177 Asp/Glu/Hydantoin racemase Vapar_4277 PF01979 Amidohydrolase family Vapar_4280 PF07690 Major Facilitator Superfamily Vapar_4282 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Vapar_4282 PF12806 Acetyl-CoA dehydrogenase C-terminal like Vapar_4282 PF02770 Acyl-CoA dehydrogenase, middle domain Vapar_4282 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Vapar_4284 PF00561 alpha/beta hydrolase fold Vapar_4285 PF00111 2Fe-2S iron-sulfur cluster binding domain Vapar_4285 PF01799 [2Fe-2S] binding domain Vapar_4286 PF00941 FAD binding domain in molybdopterin dehydrogenase Vapar_4286 PF03450 CO dehydrogenase flavoprotein C-terminal domain Vapar_4287 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase Vapar_4287 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Vapar_4288 PF00355 Rieske [2Fe-2S] domain Vapar_4289 PF14759 Reductase C-terminal Vapar_4289 PF07992 Pyridine nucleotide-disulphide oxidoreductase Vapar_4290 PF00848 Ring hydroxylating alpha subunit (catalytic domain) Vapar_4290 PF00355 Rieske [2Fe-2S] domain Vapar_4294 PF00857 Isochorismatase family Vapar_4295 PF13458 Periplasmic binding protein Vapar_4296 PF02653 Branched-chain amino acid transport system / permease component Vapar_4298 PF12399 Branched-chain amino acid ATP-binding cassette transporter Vapar_4298 PF00005 ABC transporter Vapar_4299 PF00005 ABC transporter Vapar_4301 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_4301 PF03466 LysR substrate binding domain Vapar_4303 PF02685 Glucokinase Vapar_4303 PF01418 Helix-turn-helix domain, rpiR family Vapar_4303 PF01380 SIS domain Vapar_4304 PF08546 Ketopantoate reductase PanE/ApbA C terminal Vapar_4304 PF02558 Ketopantoate reductase PanE/ApbA Vapar_4306 PF00378 Enoyl-CoA hydratase/isomerase Vapar_4307 PF02515 CoA-transferase family III Vapar_4308 PF00106 short chain dehydrogenase Vapar_4309 PF00108 Thiolase, N-terminal domain Vapar_4309 PF02803 Thiolase, C-terminal domain Vapar_4311 PF04303 PrpF protein Vapar_4313 PF12833 Helix-turn-helix domain Vapar_4313 PF02311 AraC-like ligand binding domain Vapar_4314 PF01695 IstB-like ATP binding protein Vapar_4316 PF04632 Fusaric acid resistance protein family Vapar_4317 PF07869 Protein of unknown function (DUF1656) Vapar_4318 PF13533 Biotin-lipoyl like Vapar_4320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_4320 PF03466 LysR substrate binding domain Vapar_4321 PF13426 PAS domain Vapar_4321 PF00990 Diguanylate cyclase, GGDEF domain Vapar_4321 PF00563 EAL domain Vapar_4323 PF04055 Radical SAM superfamily Vapar_4323 PF06969 HemN C-terminal domain Vapar_4324 PF01725 Ham1 family Vapar_4325 PF01138 3' exoribonuclease family, domain 1 Vapar_4325 PF03725 3' exoribonuclease family, domain 2 Vapar_4327 PF03793 PASTA domain Vapar_4327 PF00069 Protein kinase domain Vapar_4328 PF03755 YicC-like family, N-terminal region Vapar_4328 PF08340 Domain of unknown function (DUF1732) Vapar_4329 PF00625 Guanylate kinase Vapar_4330 PF01192 RNA polymerase Rpb6 Vapar_4331 PF02824 TGS domain Vapar_4331 PF04607 Region found in RelA / SpoT proteins Vapar_4331 PF13291 ACT domain Vapar_4332 PF01272 Transcription elongation factor, GreA/GreB, C-term Vapar_4332 PF03449 Transcription elongation factor, N-terminal Vapar_4335 PF01628 HrcA protein C terminal domain Vapar_4335 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding Vapar_4336 PF01513 ATP-NAD kinase Vapar_4337 PF02463 RecF/RecN/SMC N terminal domain Vapar_4338 PF03668 P-loop ATPase protein family Vapar_4339 PF14815 NUDIX domain Vapar_4339 PF00730 HhH-GPD superfamily base excision DNA repair protein Vapar_4339 PF00633 Helix-hairpin-helix motif Vapar_4340 PF00350 Dynamin family Vapar_4341 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain Vapar_4341 PF06827 Zinc finger found in FPG and IleRS Vapar_4341 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain Vapar_4344 PF08544 GHMP kinases C terminal Vapar_4344 PF00288 GHMP kinases N terminal domain Vapar_4345 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase Vapar_4345 PF14572 Phosphoribosyl synthetase-associated domain Vapar_4346 PF14693 Ribosomal protein TL5, C-terminal domain Vapar_4346 PF01386 Ribosomal L25p family Vapar_4347 PF01195 Peptidyl-tRNA hydrolase Vapar_4349 PF00037 4Fe-4S binding domain Vapar_4350 PF00528 Binding-protein-dependent transport system inner membrane component Vapar_4351 PF12911 N-terminal TM domain of oligopeptide transport permease C Vapar_4351 PF00528 Binding-protein-dependent transport system inner membrane component Vapar_4352 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Vapar_4352 PF00005 ABC transporter Vapar_4353 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Vapar_4353 PF00005 ABC transporter Vapar_4354 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Vapar_4355 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Vapar_4356 PF01425 Amidase Vapar_4358 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_4358 PF03466 LysR substrate binding domain Vapar_4361 PF07969 Amidohydrolase family Vapar_4362 PF00300 Histidine phosphatase superfamily (branch 1) Vapar_4363 PF12697 Alpha/beta hydrolase family Vapar_4364 PF01470 Pyroglutamyl peptidase Vapar_4366 PF02626 Carboxyltransferase domain, subdomain A and B Vapar_4367 PF02682 Carboxyltransferase domain, subdomain C and D Vapar_4368 PF01467 Cytidylyltransferase-like Vapar_4372 PF05193 Peptidase M16 inactive domain Vapar_4373 PF05193 Peptidase M16 inactive domain Vapar_4373 PF00675 Insulinase (Peptidase family M16) Vapar_4374 PF02881 SRP54-type protein, helical bundle domain Vapar_4374 PF00448 SRP54-type protein, GTPase domain Vapar_4376 PF00512 His Kinase A (phospho-acceptor) domain Vapar_4376 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vapar_4376 PF18415 Histidine kinase receptor ArcB trans-membrane domain Vapar_4377 PF00196 Bacterial regulatory proteins, luxR family Vapar_4377 PF00072 Response regulator receiver domain Vapar_4379 PF04545 Sigma-70, region 4 Vapar_4379 PF04542 Sigma-70 region 2 Vapar_4379 PF00140 Sigma-70 factor, region 1.2 Vapar_4380 PF08713 DNA alkylation repair enzyme Vapar_4381 PF02630 SCO1/SenC Vapar_4382 PF01040 UbiA prenyltransferase family Vapar_4387 PF00510 Cytochrome c oxidase subunit III Vapar_4389 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 Vapar_4391 PF00115 Cytochrome C and Quinol oxidase polypeptide I Vapar_4392 PF02790 Cytochrome C oxidase subunit II, transmembrane domain Vapar_4392 PF00116 Cytochrome C oxidase subunit II, periplasmic domain Vapar_4394 PF08241 Methyltransferase domain Vapar_4395 PF00156 Phosphoribosyl transferase domain Vapar_4396 PF00588 SpoU rRNA Methylase family Vapar_4398 PF10609 NUBPL iron-transfer P-loop NTPase Vapar_4398 PF01883 Iron-sulfur cluster assembly protein Vapar_4399 PF02525 Flavodoxin-like fold Vapar_4400 PF02254 TrkA-N domain Vapar_4400 PF00999 Sodium/hydrogen exchanger family Vapar_4402 PF00378 Enoyl-CoA hydratase/isomerase Vapar_4403 PF00501 AMP-binding enzyme Vapar_4403 PF07993 Male sterility protein Vapar_4403 PF00550 Phosphopantetheine attachment site Vapar_4404 PF00106 short chain dehydrogenase Vapar_4405 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_4406 PF02770 Acyl-CoA dehydrogenase, middle domain Vapar_4406 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Vapar_4406 PF12806 Acetyl-CoA dehydrogenase C-terminal like Vapar_4406 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Vapar_4410 PF06983 3-demethylubiquinone-9 3-methyltransferase Vapar_4413 PF07690 Major Facilitator Superfamily Vapar_4414 PF07237 Protein of unknown function (DUF1428) Vapar_4418 PF00672 HAMP domain Vapar_4418 PF00211 Adenylate and Guanylate cyclase catalytic domain Vapar_4418 PF02743 Cache domain Vapar_4419 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain Vapar_4419 PF01137 RNA 3'-terminal phosphate cyclase Vapar_4421 PF01139 tRNA-splicing ligase RtcB Vapar_4422 PF01795 MraW methylase family Vapar_4423 PF00158 Sigma-54 interaction domain Vapar_4423 PF06956 Regulator of RNA terminal phosphate cyclase Vapar_4424 PF02423 Ornithine cyclodeaminase/mu-crystallin family Vapar_4426 PF17991 Thioredoxin like C-terminal domain Vapar_4426 PF00578 AhpC/TSA family Vapar_4426 PF02683 Cytochrome C biogenesis protein transmembrane region Vapar_4427 PF00512 His Kinase A (phospho-acceptor) domain Vapar_4427 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vapar_4427 PF00672 HAMP domain Vapar_4428 PF02566 OsmC-like protein Vapar_4429 PF00072 Response regulator receiver domain Vapar_4429 PF00486 Transcriptional regulatory protein, C terminal Vapar_4431 PF09278 MerR, DNA binding Vapar_4431 PF00376 MerR family regulatory protein Vapar_4433 PF00108 Thiolase, N-terminal domain Vapar_4433 PF02803 Thiolase, C-terminal domain Vapar_4434 PF01144 Coenzyme A transferase Vapar_4435 PF01144 Coenzyme A transferase Vapar_4436 PF01614 Bacterial transcriptional regulator Vapar_4436 PF09339 IclR helix-turn-helix domain Vapar_4438 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_4439 PF00196 Bacterial regulatory proteins, luxR family Vapar_4439 PF00072 Response regulator receiver domain Vapar_4445 PF13629 Pilus formation protein N terminal region Vapar_4445 PF00263 Bacterial type II and III secretion system protein Vapar_4445 PF04972 BON domain Vapar_4447 PF00437 Type II/IV secretion system protein Vapar_4454 PF00072 Response regulator receiver domain Vapar_4454 PF02954 Bacterial regulatory protein, Fis family Vapar_4454 PF00158 Sigma-54 interaction domain Vapar_4456 PF00529 HlyD membrane-fusion protein of T1SS Vapar_4456 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Vapar_4457 PF03412 Peptidase C39 family Vapar_4457 PF00664 ABC transporter transmembrane region Vapar_4457 PF00005 ABC transporter Vapar_4459 PF01225 Mur ligase family, catalytic domain Vapar_4459 PF02875 Mur ligase family, glutamate ligase domain Vapar_4459 PF08245 Mur ligase middle domain Vapar_4460 PF00691 OmpA family Vapar_4463 PF03466 LysR substrate binding domain Vapar_4463 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_4464 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal Vapar_4464 PF00775 Dioxygenase Vapar_4466 PF00034 Cytochrome c Vapar_4467 PF01434 Peptidase family M41 Vapar_4467 PF17862 AAA+ lid domain Vapar_4467 PF00004 ATPase family associated with various cellular activities (AAA) Vapar_4471 PF04357 TamB, inner membrane protein subunit of TAM complex Vapar_4473 PF03466 LysR substrate binding domain Vapar_4473 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_4475 PF07690 Major Facilitator Superfamily Vapar_4477 PF03466 LysR substrate binding domain Vapar_4477 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_4478 PF00224 Pyruvate kinase, barrel domain Vapar_4478 PF02887 Pyruvate kinase, alpha/beta domain Vapar_4479 PF08546 Ketopantoate reductase PanE/ApbA C terminal Vapar_4479 PF02558 Ketopantoate reductase PanE/ApbA Vapar_4481 PF02629 CoA binding domain Vapar_4481 PF00549 CoA-ligase Vapar_4482 PF00549 CoA-ligase Vapar_4482 PF08442 ATP-grasp domain Vapar_4484 PF02515 CoA-transferase family III Vapar_4485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vapar_4485 PF00512 His Kinase A (phospho-acceptor) domain Vapar_4485 PF00989 PAS fold Vapar_4486 PF02515 CoA-transferase family III Vapar_4487 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Vapar_4487 PF00205 Thiamine pyrophosphate enzyme, central domain Vapar_4487 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Vapar_4491 PF01970 Tripartite tricarboxylate transporter TctA family Vapar_4495 PF00589 Phage integrase family Vapar_4495 PF13356 Arm DNA-binding domain Vapar_4501 PF14319 Transposase zinc-binding domain Vapar_4501 PF04986 Putative transposase Vapar_4502 PF13495 Phage integrase, N-terminal SAM-like domain Vapar_4502 PF00589 Phage integrase family Vapar_4522 PF08479 POTRA domain, ShlB-type Vapar_4522 PF17287 POTRA domain Vapar_4522 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB Vapar_4525 PF13332 Hemagglutinin repeat Vapar_4525 PF04829 Pre-toxin domain with VENN motif Vapar_4525 PF13018 Extended Signal Peptide of Type V secretion system Vapar_4525 PF05860 haemagglutination activity domain Vapar_4534 PF01381 Helix-turn-helix Vapar_4536 PF14579 Helix-hairpin-helix motif Vapar_4536 PF17657 Bacterial DNA polymerase III alpha subunit finger domain Vapar_4536 PF02811 PHP domain Vapar_4536 PF07733 Bacterial DNA polymerase III alpha NTPase domain Vapar_4558 PF00565 Staphylococcal nuclease homologue Vapar_4565 PF01230 HIT domain Vapar_4567 PF13538 UvrD-like helicase C-terminal domain Vapar_4568 PF00580 UvrD/REP helicase N-terminal domain Vapar_4568 PF13361 UvrD-like helicase C-terminal domain Vapar_4568 PF12705 PD-(D/E)XK nuclease superfamily Vapar_4569 PF17946 RecC C-terminal domain Vapar_4572 PF04286 Protein of unknown function (DUF445) Vapar_4577 PF01661 Macro domain Vapar_4580 PF00149 Calcineurin-like phosphoesterase Vapar_4585 PF00176 SNF2 family N-terminal domain Vapar_4585 PF12419 SNF2 Helicase protein Vapar_4585 PF00271 Helicase conserved C-terminal domain Vapar_4592 PF04851 Type III restriction enzyme, res subunit Vapar_4592 PF08774 VRR-NUC domain Vapar_4593 PF01555 DNA methylase Vapar_4593 PF18273 Type III R-M EcoP15I C-terminal domain Vapar_4600 PF00529 HlyD membrane-fusion protein of T1SS Vapar_4601 PF03412 Peptidase C39 family Vapar_4601 PF00005 ABC transporter Vapar_4601 PF00664 ABC transporter transmembrane region Vapar_4603 PF03372 Endonuclease/Exonuclease/phosphatase family Vapar_4604 PF00072 Response regulator receiver domain Vapar_4604 PF00486 Transcriptional regulatory protein, C terminal Vapar_4604 PF01627 Hpt domain Vapar_4605 PF00072 Response regulator receiver domain Vapar_4605 PF00486 Transcriptional regulatory protein, C terminal Vapar_4606 PF00486 Transcriptional regulatory protein, C terminal Vapar_4606 PF00072 Response regulator receiver domain Vapar_4607 PF02702 Osmosensitive K+ channel His kinase sensor domain Vapar_4607 PF00512 His Kinase A (phospho-acceptor) domain Vapar_4607 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vapar_4607 PF13492 GAF domain Vapar_4607 PF13493 Domain of unknown function (DUF4118) Vapar_4608 PF07715 TonB-dependent Receptor Plug Domain Vapar_4608 PF00593 TonB dependent receptor Vapar_4609 PF12852 Cupin Vapar_4609 PF12833 Helix-turn-helix domain Vapar_4612 PF01553 Acyltransferase Vapar_4613 PF01979 Amidohydrolase family Vapar_4614 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Vapar_4614 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Vapar_4615 PF00156 Phosphoribosyl transferase domain Vapar_4616 PF03652 Holliday junction resolvase Vapar_4617 PF02622 Uncharacterized ACR, COG1678 Vapar_4618 PF00875 DNA photolyase Vapar_4618 PF03441 FAD binding domain of DNA photolyase Vapar_4622 PF01584 CheW-like domain Vapar_4622 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vapar_4622 PF01627 Hpt domain Vapar_4622 PF00072 Response regulator receiver domain Vapar_4623 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term Vapar_4623 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Vapar_4625 PF00072 Response regulator receiver domain Vapar_4626 PF00072 Response regulator receiver domain Vapar_4627 PF00301 Rubredoxin Vapar_4629 PF00202 Aminotransferase class-III Vapar_4630 PF01808 AICARFT/IMPCHase bienzyme Vapar_4630 PF02142 MGS-like domain Vapar_4631 PF02954 Bacterial regulatory protein, Fis family Vapar_4632 PF01207 Dihydrouridine synthase (Dus) Vapar_4633 PF09335 SNARE associated Golgi protein Vapar_4635 PF01926 50S ribosome-binding GTPase Vapar_4635 PF06071 Protein of unknown function (DUF933) Vapar_4636 PF13407 Periplasmic binding protein domain Vapar_4637 PF00005 ABC transporter Vapar_4638 PF02653 Branched-chain amino acid transport system / permease component Vapar_4639 PF00356 Bacterial regulatory proteins, lacI family Vapar_4640 PF00294 pfkB family carbohydrate kinase Vapar_4641 PF05025 RbsD / FucU transport protein family Vapar_4643 PF01494 FAD binding domain Vapar_4644 PF13098 Thioredoxin-like domain Vapar_4644 PF10411 Disulfide bond isomerase protein N-terminus Vapar_4646 PF00378 Enoyl-CoA hydratase/isomerase Vapar_4650 PF13532 2OG-Fe(II) oxygenase superfamily Vapar_4651 PF00392 Bacterial regulatory proteins, gntR family Vapar_4651 PF00155 Aminotransferase class I and II Vapar_4653 PF00034 Cytochrome c Vapar_4654 PF13442 Cytochrome C oxidase, cbb3-type, subunit III Vapar_4654 PF00034 Cytochrome c Vapar_4656 PF01545 Cation efflux family Vapar_4657 PF05491 RuvB C-terminal winged helix domain Vapar_4657 PF17864 RuvB AAA lid domain Vapar_4657 PF05496 Holliday junction DNA helicase RuvB P-loop domain Vapar_4658 PF01066 CDP-alcohol phosphatidyltransferase Vapar_4659 PF12146 Serine aminopeptidase, S33 Vapar_4659 PF12147 Putative methyltransferase Vapar_4660 PF00782 Dual specificity phosphatase, catalytic domain Vapar_4665 PF01330 RuvA N terminal domain Vapar_4665 PF07499 RuvA, C-terminal domain Vapar_4666 PF02562 PhoH-like protein Vapar_4667 PF02130 Uncharacterized protein family UPF0054 Vapar_4668 PF02580 D-Tyr-tRNA(Tyr) deacylase Vapar_4669 PF01545 Cation efflux family Vapar_4669 PF16916 Dimerisation domain of Zinc Transporter Vapar_4673 PF04225 Opacity-associated protein A LysM-like domain Vapar_4673 PF01551 Peptidase family M23 Vapar_4674 PF03702 Anhydro-N-acetylmuramic acid kinase Vapar_4675 PF07690 Major Facilitator Superfamily Vapar_4676 PF01521 Iron-sulphur cluster biosynthesis Vapar_4677 PF00380 Ribosomal protein S9/S16 Vapar_4678 PF00572 Ribosomal protein L13 Vapar_4679 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ Vapar_4680 PF03330 Lytic transglycolase Vapar_4681 PF02219 Methylenetetrahydrofolate reductase Vapar_4682 PF01728 FtsJ-like methyltransferase Vapar_4682 PF01479 S4 domain Vapar_4683 PF05221 S-adenosyl-L-homocysteine hydrolase Vapar_4683 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain Vapar_4686 PF16658 Class II release factor RF3, C-terminal domain Vapar_4686 PF00009 Elongation factor Tu GTP binding domain Vapar_4686 PF03144 Elongation factor Tu domain 2 Vapar_4689 PF00005 ABC transporter Vapar_4689 PF13732 Domain of unknown function (DUF4162) Vapar_4691 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_4692 PF00850 Histone deacetylase domain Vapar_4693 PF02423 Ornithine cyclodeaminase/mu-crystallin family Vapar_4694 PF00155 Aminotransferase class I and II Vapar_4694 PF00392 Bacterial regulatory proteins, gntR family Vapar_4695 PF00202 Aminotransferase class-III Vapar_4696 PF00005 ABC transporter Vapar_4696 PF08402 TOBE domain Vapar_4698 PF00528 Binding-protein-dependent transport system inner membrane component Vapar_4699 PF00528 Binding-protein-dependent transport system inner membrane component Vapar_4700 PF00491 Arginase family Vapar_4701 PF00171 Aldehyde dehydrogenase family Vapar_4702 PF00005 ABC transporter Vapar_4702 PF17755 UvrA DNA-binding domain Vapar_4702 PF17760 UvrA interaction domain Vapar_4706 PF08946 Osmosensory transporter coiled coil Vapar_4706 PF00083 Sugar (and other) transporter Vapar_4710 PF00682 HMGL-like Vapar_4711 PF00708 Acylphosphatase Vapar_4712 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Vapar_4712 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Vapar_4712 PF02770 Acyl-CoA dehydrogenase, middle domain Vapar_4713 PF02515 CoA-transferase family III Vapar_4714 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_4716 PF01614 Bacterial transcriptional regulator Vapar_4716 PF09339 IclR helix-turn-helix domain Vapar_4717 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Vapar_4719 PF00364 Biotin-requiring enzyme Vapar_4719 PF02785 Biotin carboxylase C-terminal domain Vapar_4719 PF00289 Biotin carboxylase, N-terminal domain Vapar_4719 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Vapar_4721 PF00378 Enoyl-CoA hydratase/isomerase Vapar_4722 PF01039 Carboxyl transferase domain Vapar_4723 PF13193 AMP-binding enzyme C-terminal domain Vapar_4723 PF00501 AMP-binding enzyme Vapar_4724 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Vapar_4724 PF02770 Acyl-CoA dehydrogenase, middle domain Vapar_4724 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Vapar_4727 PF13419 Haloacid dehalogenase-like hydrolase Vapar_4728 PF13667 ThiC-associated domain Vapar_4728 PF01964 Radical SAM ThiC family Vapar_4730 PF02770 Acyl-CoA dehydrogenase, middle domain Vapar_4730 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Vapar_4730 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Vapar_4731 PF07687 Peptidase dimerisation domain Vapar_4731 PF01546 Peptidase family M20/M25/M40 Vapar_4732 PF00108 Thiolase, N-terminal domain Vapar_4732 PF02803 Thiolase, C-terminal domain Vapar_4733 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) Vapar_4734 PF00484 Carbonic anhydrase Vapar_4735 PF13411 MerR HTH family regulatory protein Vapar_4738 PF00849 RNA pseudouridylate synthase Vapar_4743 PF05746 DALR anticodon binding domain Vapar_4743 PF02092 Glycyl-tRNA synthetase beta subunit Vapar_4744 PF02091 Glycyl-tRNA synthetase alpha subunit Vapar_4745 PF00781 Diacylglycerol kinase catalytic domain Vapar_4746 PF00149 Calcineurin-like phosphoesterase Vapar_4747 PF01569 PAP2 superfamily Vapar_4748 PF00710 Asparaginase, N-terminal Vapar_4748 PF17763 Glutaminase/Asparaginase C-terminal domain Vapar_4750 PF00484 Carbonic anhydrase Vapar_4752 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_4752 PF03466 LysR substrate binding domain Vapar_4753 PF07690 Major Facilitator Superfamily Vapar_4756 PF01979 Amidohydrolase family Vapar_4757 PF02633 Creatinine amidohydrolase Vapar_4759 PF00005 ABC transporter Vapar_4760 PF00528 Binding-protein-dependent transport system inner membrane component Vapar_4762 PF00795 Carbon-nitrogen hydrolase Vapar_4763 PF03471 Transporter associated domain Vapar_4763 PF00571 CBS domain Vapar_4765 PF01037 Lrp/AsnC ligand binding domain Vapar_4765 PF13404 AsnC-type helix-turn-helix domain Vapar_4766 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Vapar_4767 PF00497 Bacterial extracellular solute-binding proteins, family 3 Vapar_4768 PF00351 Biopterin-dependent aromatic amino acid hydroxylase Vapar_4769 PF00501 AMP-binding enzyme Vapar_4769 PF13193 AMP-binding enzyme C-terminal domain Vapar_4772 PF13091 PLD-like domain Vapar_4774 PF07715 TonB-dependent Receptor Plug Domain Vapar_4774 PF00593 TonB dependent receptor Vapar_4779 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_4781 PF01494 FAD binding domain Vapar_4788 PF00202 Aminotransferase class-III Vapar_4789 PF00551 Formyl transferase Vapar_4792 PF02785 Biotin carboxylase C-terminal domain Vapar_4792 PF00289 Biotin carboxylase, N-terminal domain Vapar_4792 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Vapar_4793 PF13193 AMP-binding enzyme C-terminal domain Vapar_4793 PF00501 AMP-binding enzyme Vapar_4794 PF00440 Bacterial regulatory proteins, tetR family Vapar_4795 PF13458 Periplasmic binding protein Vapar_4796 PF00667 FAD binding domain Vapar_4796 PF00258 Flavodoxin Vapar_4796 PF00175 Oxidoreductase NAD-binding domain Vapar_4796 PF00067 Cytochrome P450 Vapar_4798 PF00440 Bacterial regulatory proteins, tetR family Vapar_4801 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain Vapar_4801 PF06974 Protein of unknown function (DUF1298) Vapar_4802 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain Vapar_4802 PF00326 Prolyl oligopeptidase family Vapar_4803 PF00491 Arginase family Vapar_4808 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain Vapar_4808 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Vapar_4810 PF01619 Proline dehydrogenase Vapar_4810 PF14850 DNA-binding domain of Proline dehydrogenase Vapar_4810 PF18327 Proline utilization A proline dehydrogenase N-terminal domain Vapar_4810 PF00171 Aldehyde dehydrogenase family Vapar_4811 PF01037 Lrp/AsnC ligand binding domain Vapar_4812 PF01168 Alanine racemase, N-terminal domain Vapar_4813 PF00437 Type II/IV secretion system protein Vapar_4814 PF00437 Type II/IV secretion system protein Vapar_4815 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase Vapar_4815 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase Vapar_4817 PF13580 SIS domain Vapar_4818 PF02021 Uncharacterised protein family UPF0102 Vapar_4819 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Vapar_4821 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_4822 PF00501 AMP-binding enzyme Vapar_4822 PF13193 AMP-binding enzyme C-terminal domain Vapar_4826 PF02525 Flavodoxin-like fold Vapar_4827 PF03466 LysR substrate binding domain Vapar_4827 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_4830 PF00440 Bacterial regulatory proteins, tetR family Vapar_4830 PF08361 MAATS-type transcriptional repressor, C-terminal region Vapar_4831 PF00529 HlyD membrane-fusion protein of T1SS Vapar_4831 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Vapar_4832 PF00873 AcrB/AcrD/AcrF family Vapar_4833 PF02321 Outer membrane efflux protein Vapar_4836 PF00561 alpha/beta hydrolase fold Vapar_4838 PF00296 Luciferase-like monooxygenase Vapar_4839 PF00857 Isochorismatase family Vapar_4840 PF01042 Endoribonuclease L-PSP Vapar_4841 PF00561 alpha/beta hydrolase fold Vapar_4842 PF00881 Nitroreductase family Vapar_4843 PF01613 Flavin reductase like domain Vapar_4844 PF00440 Bacterial regulatory proteins, tetR family Vapar_4844 PF08362 YcdC-like protein, C-terminal region Vapar_4845 PF14226 non-haem dioxygenase in morphine synthesis N-terminal Vapar_4845 PF03171 2OG-Fe(II) oxygenase superfamily Vapar_4848 PF00005 ABC transporter Vapar_4857 PF00085 Thioredoxin Vapar_4858 PF00270 DEAD/DEAH box helicase Vapar_4858 PF00271 Helicase conserved C-terminal domain Vapar_4858 PF08494 DEAD/H associated Vapar_4859 PF01068 ATP dependent DNA ligase domain Vapar_4859 PF04679 ATP dependent DNA ligase C terminal region Vapar_4859 PF04675 DNA ligase N terminus Vapar_4860 PF04679 ATP dependent DNA ligase C terminal region Vapar_4860 PF01068 ATP dependent DNA ligase domain Vapar_4860 PF04675 DNA ligase N terminus Vapar_4863 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Vapar_4863 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Vapar_4864 PF13407 Periplasmic binding protein domain Vapar_4865 PF02653 Branched-chain amino acid transport system / permease component Vapar_4866 PF00005 ABC transporter Vapar_4867 PF00480 ROK family Vapar_4867 PF01047 MarR family Vapar_4868 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain Vapar_4868 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain Vapar_4869 PF02874 ATP synthase alpha/beta family, beta-barrel domain Vapar_4869 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Vapar_4871 PF00231 ATP synthase Vapar_4872 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Vapar_4872 PF00306 ATP synthase alpha/beta chain, C terminal domain Vapar_4872 PF02874 ATP synthase alpha/beta family, beta-barrel domain Vapar_4873 PF00213 ATP synthase delta (OSCP) subunit Vapar_4874 PF00430 ATP synthase B/B' CF(0) Vapar_4875 PF00137 ATP synthase subunit C Vapar_4876 PF00119 ATP synthase A chain Vapar_4878 PF01063 Amino-transferase class IV Vapar_4879 PF04359 Protein of unknown function (DUF493) Vapar_4880 PF03099 Biotin/lipoate A/B protein ligase family Vapar_4881 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family Vapar_4881 PF04055 Radical SAM superfamily Vapar_4882 PF07690 Major Facilitator Superfamily Vapar_4883 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_4883 PF03466 LysR substrate binding domain Vapar_4884 PF13193 AMP-binding enzyme C-terminal domain Vapar_4884 PF00501 AMP-binding enzyme Vapar_4885 PF03600 Citrate transporter Vapar_4889 PF00107 Zinc-binding dehydrogenase Vapar_4889 PF16884 N-terminal domain of oxidoreductase Vapar_4890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vapar_4890 PF00672 HAMP domain Vapar_4890 PF00512 His Kinase A (phospho-acceptor) domain Vapar_4890 PF16750 Sensor domain of 2-component histidine kinase Vapar_4891 PF00072 Response regulator receiver domain Vapar_4891 PF00486 Transcriptional regulatory protein, C terminal Vapar_4896 PF05524 PEP-utilising enzyme, N-terminal Vapar_4896 PF02896 PEP-utilising enzyme, TIM barrel domain Vapar_4896 PF00391 PEP-utilising enzyme, mobile domain Vapar_4897 PF00381 PTS HPr component phosphorylation site Vapar_4899 PF07690 Major Facilitator Superfamily Vapar_4901 PF00578 AhpC/TSA family Vapar_4903 PF08534 Redoxin Vapar_4904 PF00366 Ribosomal protein S17 Vapar_4905 PF00831 Ribosomal L29 protein Vapar_4906 PF00252 Ribosomal protein L16p/L10e Vapar_4907 PF07650 KH domain Vapar_4907 PF00189 Ribosomal protein S3, C-terminal domain Vapar_4908 PF00237 Ribosomal protein L22p/L17e Vapar_4909 PF00203 Ribosomal protein S19 Vapar_4910 PF03947 Ribosomal Proteins L2, C-terminal domain Vapar_4910 PF00181 Ribosomal Proteins L2, RNA binding domain Vapar_4911 PF00276 Ribosomal protein L23 Vapar_4912 PF00573 Ribosomal protein L4/L1 family Vapar_4913 PF00297 Ribosomal protein L3 Vapar_4916 PF00338 Ribosomal protein S10p/S20e Vapar_4917 PF03144 Elongation factor Tu domain 2 Vapar_4917 PF03143 Elongation factor Tu C-terminal domain Vapar_4917 PF00009 Elongation factor Tu GTP binding domain Vapar_4918 PF14492 Elongation Factor G, domain II Vapar_4918 PF00679 Elongation factor G C-terminus Vapar_4918 PF03764 Elongation factor G, domain IV Vapar_4918 PF00009 Elongation factor Tu GTP binding domain Vapar_4918 PF03144 Elongation factor Tu domain 2 Vapar_4919 PF00177 Ribosomal protein S7p/S5e Vapar_4920 PF00164 Ribosomal protein S12/S23 Vapar_4921 PF00768 D-alanyl-D-alanine carboxypeptidase Vapar_4921 PF07943 Penicillin-binding protein 5, C-terminal domain Vapar_4922 PF02129 X-Pro dipeptidyl-peptidase (S15 family) Vapar_4926 PF00490 Delta-aminolevulinic acid dehydratase Vapar_4927 PF01544 CorA-like Mg2+ transporter protein Vapar_4929 PF03466 LysR substrate binding domain Vapar_4929 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_4930 PF01738 Dienelactone hydrolase family Vapar_4931 PF01323 DSBA-like thioredoxin domain Vapar_4933 PF01914 MarC family integral membrane protein Vapar_4936 PF00501 AMP-binding enzyme Vapar_4937 PF00005 ABC transporter Vapar_4938 PF00005 ABC transporter Vapar_4938 PF12399 Branched-chain amino acid ATP-binding cassette transporter Vapar_4940 PF02653 Branched-chain amino acid transport system / permease component Vapar_4942 PF07859 alpha/beta hydrolase fold Vapar_4943 PF02222 ATP-grasp domain Vapar_4944 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Vapar_4944 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Vapar_4947 PF03309 Type III pantothenate kinase Vapar_4948 PF04972 BON domain Vapar_4948 PF01476 LysM domain Vapar_4950 PF03480 Bacterial extracellular solute-binding protein, family 7 Vapar_4952 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Vapar_4953 PF02896 PEP-utilising enzyme, TIM barrel domain Vapar_4953 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain Vapar_4953 PF00391 PEP-utilising enzyme, mobile domain Vapar_4955 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Vapar_4955 PF07992 Pyridine nucleotide-disulphide oxidoreductase Vapar_4956 PF02558 Ketopantoate reductase PanE/ApbA Vapar_4956 PF08546 Ketopantoate reductase PanE/ApbA C terminal Vapar_4957 PF01048 Phosphorylase superfamily Vapar_4957 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus Vapar_4958 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_4960 PF00067 Cytochrome P450 Vapar_4962 PF02798 Glutathione S-transferase, N-terminal domain Vapar_4963 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_4963 PF03466 LysR substrate binding domain Vapar_4964 PF00005 ABC transporter Vapar_4965 PF01061 ABC-2 type transporter Vapar_4966 PF01047 MarR family Vapar_4967 PF02566 OsmC-like protein Vapar_4969 PF01636 Phosphotransferase enzyme family Vapar_4970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_4970 PF03466 LysR substrate binding domain Vapar_4971 PF18158 Adaptive response protein AidB N-terminal domain Vapar_4971 PF02770 Acyl-CoA dehydrogenase, middle domain Vapar_4971 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Vapar_4972 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_4973 PF02515 CoA-transferase family III Vapar_4976 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vapar_4976 PF00183 Hsp90 protein Vapar_4978 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_4978 PF03466 LysR substrate binding domain Vapar_4979 PF08240 Alcohol dehydrogenase GroES-like domain Vapar_4979 PF00107 Zinc-binding dehydrogenase Vapar_4980 PF00230 Major intrinsic protein Vapar_4982 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vapar_4982 PF08521 Two-component sensor kinase N-terminal Vapar_4982 PF00512 His Kinase A (phospho-acceptor) domain Vapar_4983 PF00072 Response regulator receiver domain Vapar_4983 PF00486 Transcriptional regulatory protein, C terminal Vapar_4985 PF00849 RNA pseudouridylate synthase Vapar_4985 PF01479 S4 domain Vapar_4986 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase Vapar_4986 PF04101 Glycosyltransferase family 28 C-terminal domain Vapar_4990 PF00072 Response regulator receiver domain Vapar_4990 PF00486 Transcriptional regulatory protein, C terminal Vapar_4991 PF00512 His Kinase A (phospho-acceptor) domain Vapar_4991 PF13492 GAF domain Vapar_4991 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vapar_4991 PF13493 Domain of unknown function (DUF4118) Vapar_4991 PF02702 Osmosensitive K+ channel His kinase sensor domain Vapar_4992 PF07690 Major Facilitator Superfamily Vapar_4993 PF02669 K+-transporting ATPase, c chain Vapar_4995 PF03814 Potassium-transporting ATPase A subunit Vapar_4998 PF02777 Iron/manganese superoxide dismutases, C-terminal domain Vapar_4998 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain Vapar_5000 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_5001 PF16123 Hydroxyacylglutathione hydrolase C-terminus Vapar_5001 PF00753 Metallo-beta-lactamase superfamily Vapar_5003 PF00106 short chain dehydrogenase Vapar_5005 PF13545 Crp-like helix-turn-helix domain Vapar_5005 PF00027 Cyclic nucleotide-binding domain Vapar_5006 PF00501 AMP-binding enzyme Vapar_5007 PF00005 ABC transporter Vapar_5007 PF12399 Branched-chain amino acid ATP-binding cassette transporter Vapar_5011 PF00005 ABC transporter Vapar_5012 PF00501 AMP-binding enzyme Vapar_5012 PF13193 AMP-binding enzyme C-terminal domain Vapar_5013 PF01965 DJ-1/PfpI family Vapar_5015 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_5018 PF13360 PQQ-like domain Vapar_5018 PF13442 Cytochrome C oxidase, cbb3-type, subunit III Vapar_5020 PF01011 PQQ enzyme repeat Vapar_5021 PF00480 ROK family Vapar_5021 PF01325 Iron dependent repressor, N-terminal DNA binding domain Vapar_5022 PF00005 ABC transporter Vapar_5023 PF02653 Branched-chain amino acid transport system / permease component Vapar_5024 PF13407 Periplasmic binding protein domain Vapar_5026 PF00497 Bacterial extracellular solute-binding proteins, family 3 Vapar_5027 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_5027 PF03466 LysR substrate binding domain Vapar_5028 PF00175 Oxidoreductase NAD-binding domain Vapar_5028 PF00258 Flavodoxin Vapar_5028 PF00667 FAD binding domain Vapar_5029 PF00593 TonB dependent receptor Vapar_5029 PF07715 TonB-dependent Receptor Plug Domain Vapar_5030 PF00676 Dehydrogenase E1 component Vapar_5031 PF02780 Transketolase, C-terminal domain Vapar_5031 PF02779 Transketolase, pyrimidine binding domain Vapar_5034 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_5034 PF03466 LysR substrate binding domain Vapar_5035 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_5038 PF01494 FAD binding domain Vapar_5040 PF00378 Enoyl-CoA hydratase/isomerase Vapar_5041 PF02770 Acyl-CoA dehydrogenase, middle domain Vapar_5041 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Vapar_5041 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Vapar_5042 PF13193 AMP-binding enzyme C-terminal domain Vapar_5042 PF00501 AMP-binding enzyme Vapar_5044 PF01196 Ribosomal protein L17 Vapar_5045 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain Vapar_5045 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain Vapar_5045 PF01000 RNA polymerase Rpb3/RpoA insert domain Vapar_5046 PF00163 Ribosomal protein S4/S9 N-terminal domain Vapar_5046 PF01479 S4 domain Vapar_5047 PF00411 Ribosomal protein S11 Vapar_5048 PF00416 Ribosomal protein S13/S18 Vapar_5049 PF00444 Ribosomal protein L36 Vapar_5050 PF00344 SecY translocase Vapar_5051 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A Vapar_5052 PF00327 Ribosomal protein L30p/L7e Vapar_5053 PF00333 Ribosomal protein S5, N-terminal domain Vapar_5053 PF03719 Ribosomal protein S5, C-terminal domain Vapar_5054 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast Vapar_5055 PF00347 Ribosomal protein L6 Vapar_5056 PF00410 Ribosomal protein S8 Vapar_5057 PF00253 Ribosomal protein S14p/S29e Vapar_5058 PF00281 Ribosomal protein L5 Vapar_5058 PF00673 ribosomal L5P family C-terminus Vapar_5059 PF00467 KOW motif Vapar_5059 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 Vapar_5060 PF00238 Ribosomal protein L14p/L23e Vapar_5062 PF03807 NADP oxidoreductase coenzyme F420-dependent Vapar_5062 PF14748 Pyrroline-5-carboxylate reductase dimerisation Vapar_5064 PF01040 UbiA prenyltransferase family Vapar_5065 PF00210 Ferritin-like domain Vapar_5066 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_5066 PF03466 LysR substrate binding domain Vapar_5067 PF01810 LysE type translocator Vapar_5068 PF00270 DEAD/DEAH box helicase Vapar_5068 PF00271 Helicase conserved C-terminal domain Vapar_5068 PF17191 RecG wedge domain Vapar_5069 PF02547 Queuosine biosynthesis protein Vapar_5071 PF01702 Queuine tRNA-ribosyltransferase Vapar_5082 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family Vapar_5085 PF00814 Glycoprotease family Vapar_5087 PF00455 DeoR C terminal sensor domain Vapar_5087 PF08220 DeoR-like helix-turn-helix domain Vapar_5088 PF00293 NUDIX domain Vapar_5089 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family Vapar_5091 PF01300 Telomere recombination Vapar_5091 PF03481 Putative GTP-binding controlling metal-binding Vapar_5092 PF02222 ATP-grasp domain Vapar_5092 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain Vapar_5093 PF00731 AIR carboxylase Vapar_5094 PF00085 Thioredoxin Vapar_5096 PF01259 SAICAR synthetase Vapar_5097 PF01116 Fructose-bisphosphate aldolase class-II Vapar_5098 PF01037 Lrp/AsnC ligand binding domain Vapar_5099 PF00291 Pyridoxal-phosphate dependent enzyme Vapar_5100 PF00224 Pyruvate kinase, barrel domain Vapar_5100 PF02887 Pyruvate kinase, alpha/beta domain Vapar_5101 PF00162 Phosphoglycerate kinase Vapar_5102 PF03466 LysR substrate binding domain Vapar_5102 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_5105 PF01494 FAD binding domain Vapar_5111 PF02911 Formyl transferase, C-terminal domain Vapar_5111 PF00551 Formyl transferase Vapar_5113 PF01327 Polypeptide deformylase Vapar_5115 PF02481 DNA recombination-mediator protein A Vapar_5115 PF17782 DprA winged helix domain Vapar_5116 PF04361 Protein of unknown function (DUF494) Vapar_5118 PF07549 SecD/SecF GG Motif Vapar_5118 PF02355 Protein export membrane protein Vapar_5119 PF13721 SecD export protein N-terminal TM region Vapar_5119 PF02355 Protein export membrane protein Vapar_5119 PF07549 SecD/SecF GG Motif Vapar_5120 PF02699 Preprotein translocase subunit Vapar_5122 PF01037 Lrp/AsnC ligand binding domain Vapar_5123 PF00497 Bacterial extracellular solute-binding proteins, family 3 Vapar_5124 PF00528 Binding-protein-dependent transport system inner membrane component Vapar_5125 PF05977 Transmembrane secretion effector Vapar_5129 PF00115 Cytochrome C and Quinol oxidase polypeptide I Vapar_5130 PF00116 Cytochrome C oxidase subunit II, periplasmic domain Vapar_5132 PF02633 Creatinine amidohydrolase Vapar_5133 PF00005 ABC transporter Vapar_5134 PF00528 Binding-protein-dependent transport system inner membrane component Vapar_5135 PF04030 D-arabinono-1,4-lactone oxidase Vapar_5135 PF01565 FAD binding domain Vapar_5138 PF00111 2Fe-2S iron-sulfur cluster binding domain Vapar_5138 PF00175 Oxidoreductase NAD-binding domain Vapar_5140 PF01042 Endoribonuclease L-PSP Vapar_5142 PF01261 Xylose isomerase-like TIM barrel Vapar_5143 PF00596 Class II Aldolase and Adducin N-terminal domain Vapar_5144 PF17042 Nucleotide-binding C-terminal domain Vapar_5144 PF07005 Sugar-binding N-terminal domain Vapar_5145 PF01370 NAD dependent epimerase/dehydratase family Vapar_5146 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase Vapar_5146 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase Vapar_5147 PF07690 Major Facilitator Superfamily Vapar_5148 PF07729 FCD domain Vapar_5148 PF00392 Bacterial regulatory proteins, gntR family Vapar_5149 PF00456 Transketolase, thiamine diphosphate binding domain Vapar_5149 PF17831 Pyruvate dehydrogenase E1 component middle domain Vapar_5150 PF01037 Lrp/AsnC ligand binding domain Vapar_5155 PF00691 OmpA family Vapar_5155 PF04972 BON domain Vapar_5156 PF00196 Bacterial regulatory proteins, luxR family Vapar_5156 PF00072 Response regulator receiver domain Vapar_5157 PF00989 PAS fold Vapar_5157 PF00512 His Kinase A (phospho-acceptor) domain Vapar_5157 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vapar_5158 PF00795 Carbon-nitrogen hydrolase Vapar_5160 PF03710 Glutamate-ammonia ligase adenylyltransferase Vapar_5160 PF08335 GlnD PII-uridylyltransferase Vapar_5161 PF05036 Sporulation related domain Vapar_5161 PF03330 Lytic transglycolase Vapar_5162 PF02627 Carboxymuconolactone decarboxylase family Vapar_5163 PF12680 SnoaL-like domain Vapar_5163 PF08281 Sigma-70, region 4 Vapar_5163 PF04542 Sigma-70 region 2 Vapar_5165 PF00255 Glutathione peroxidase Vapar_5166 PF13417 Glutathione S-transferase, N-terminal domain Vapar_5166 PF00043 Glutathione S-transferase, C-terminal domain Vapar_5167 PF08328 Adenylosuccinate lyase C-terminal Vapar_5167 PF00206 Lyase Vapar_5169 PF00593 TonB dependent receptor Vapar_5169 PF07660 Secretin and TonB N terminus short domain Vapar_5169 PF07715 TonB-dependent Receptor Plug Domain Vapar_5170 PF07152 YaeQ protein Vapar_5173 PF03741 Integral membrane protein TerC family Vapar_5175 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV Vapar_5176 PF01435 Peptidase family M48 Vapar_5176 PF13181 Tetratricopeptide repeat Vapar_5177 PF01967 MoaC family Vapar_5179 PF05567 Neisseria PilC beta-propeller domain Vapar_5185 PF00114 Pilin (bacterial filament) Vapar_5185 PF07963 Prokaryotic N-terminal methylation motif Vapar_5187 PF00211 Adenylate and Guanylate cyclase catalytic domain Vapar_5188 PF16697 Inner membrane component of T3SS, cytoplasmic domain Vapar_5190 PF03741 Integral membrane protein TerC family Vapar_5191 PF02629 CoA binding domain Vapar_5191 PF00549 CoA-ligase Vapar_5192 PF08442 ATP-grasp domain Vapar_5192 PF00549 CoA-ligase Vapar_5193 PF01118 Semialdehyde dehydrogenase, NAD binding domain Vapar_5194 PF02631 RecX family Vapar_5195 PF00154 recA bacterial DNA recombination protein Vapar_5197 PF00072 Response regulator receiver domain Vapar_5197 PF00486 Transcriptional regulatory protein, C terminal Vapar_5198 PF08521 Two-component sensor kinase N-terminal Vapar_5198 PF00512 His Kinase A (phospho-acceptor) domain Vapar_5198 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vapar_5200 PF02237 Biotin protein ligase C terminal domain Vapar_5200 PF03099 Biotin/lipoate A/B protein ligase family Vapar_5200 PF08279 HTH domain Vapar_5202 PF01751 Toprim domain Vapar_5202 PF01131 DNA topoisomerase Vapar_5203 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_5204 PF03466 LysR substrate binding domain Vapar_5204 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_5205 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_5208 PF07722 Peptidase C26 Vapar_5211 PF01176 Translation initiation factor 1A / IF-1 Vapar_5212 PF03880 DbpA RNA binding domain Vapar_5212 PF00270 DEAD/DEAH box helicase Vapar_5212 PF00271 Helicase conserved C-terminal domain Vapar_5216 PF07729 FCD domain Vapar_5216 PF00392 Bacterial regulatory proteins, gntR family Vapar_5217 PF17806 Sarcosine oxidase A3 domain Vapar_5217 PF07992 Pyridine nucleotide-disulphide oxidoreductase Vapar_5219 PF01266 FAD dependent oxidoreductase Vapar_5220 PF05544 Proline racemase Vapar_5221 PF13458 Periplasmic binding protein Vapar_5222 PF00701 Dihydrodipicolinate synthetase family Vapar_5223 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_5224 PF01546 Peptidase family M20/M25/M40 Vapar_5224 PF07687 Peptidase dimerisation domain Vapar_5225 PF00202 Aminotransferase class-III Vapar_5227 PF00850 Histone deacetylase domain Vapar_5228 PF07729 FCD domain Vapar_5228 PF00392 Bacterial regulatory proteins, gntR family Vapar_5230 PF00202 Aminotransferase class-III Vapar_5231 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Vapar_5232 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Vapar_5232 PF00005 ABC transporter Vapar_5233 PF00528 Binding-protein-dependent transport system inner membrane component Vapar_5233 PF12911 N-terminal TM domain of oligopeptide transport permease C Vapar_5234 PF00528 Binding-protein-dependent transport system inner membrane component Vapar_5235 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Vapar_5236 PF00596 Class II Aldolase and Adducin N-terminal domain Vapar_5237 PF05726 Pirin C-terminal cupin domain Vapar_5237 PF02678 Pirin Vapar_5239 PF03466 LysR substrate binding domain Vapar_5239 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_5241 PF00528 Binding-protein-dependent transport system inner membrane component Vapar_5242 PF00528 Binding-protein-dependent transport system inner membrane component Vapar_5243 PF00497 Bacterial extracellular solute-binding proteins, family 3 Vapar_5244 PF01063 Amino-transferase class IV Vapar_5245 PF00005 ABC transporter Vapar_5246 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Vapar_5248 PF01425 Amidase Vapar_5250 PF05726 Pirin C-terminal cupin domain Vapar_5250 PF02678 Pirin Vapar_5252 PF01447 Thermolysin metallopeptidase, catalytic domain Vapar_5252 PF02868 Thermolysin metallopeptidase, alpha-helical domain Vapar_5252 PF16485 Protealysin propeptide Vapar_5254 PF01566 Natural resistance-associated macrophage protein Vapar_5255 PF03992 Antibiotic biosynthesis monooxygenase Vapar_5258 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Vapar_5258 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Vapar_5259 PF02779 Transketolase, pyrimidine binding domain Vapar_5259 PF02780 Transketolase, C-terminal domain Vapar_5259 PF00456 Transketolase, thiamine diphosphate binding domain Vapar_5260 PF02675 S-adenosylmethionine decarboxylase Vapar_5261 PF00483 Nucleotidyl transferase Vapar_5262 PF00557 Metallopeptidase family M24 Vapar_5262 PF05195 Aminopeptidase P, N-terminal domain Vapar_5263 PF03466 LysR substrate binding domain Vapar_5263 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_5270 PF03949 Malic enzyme, NAD binding domain Vapar_5270 PF00390 Malic enzyme, N-terminal domain Vapar_5270 PF01515 Phosphate acetyl/butaryl transferase Vapar_5271 PF00545 ribonuclease Vapar_5273 PF00398 Ribosomal RNA adenine dimethylase Vapar_5274 PF09312 SurA N-terminal domain Vapar_5274 PF00639 PPIC-type PPIASE domain Vapar_5275 PF04453 LPS transport system D Vapar_5276 PF01636 Phosphotransferase enzyme family Vapar_5277 PF04452 RNA methyltransferase Vapar_5280 PF07690 Major Facilitator Superfamily Vapar_5281 PF12146 Serine aminopeptidase, S33 Vapar_5285 PF00027 Cyclic nucleotide-binding domain Vapar_5285 PF00520 Ion transport protein Vapar_5286 PF01205 Uncharacterized protein family UPF0029 Vapar_5286 PF09186 Domain of unknown function (DUF1949) Vapar_5287 PF08241 Methyltransferase domain Vapar_5288 PF00561 alpha/beta hydrolase fold Vapar_5289 PF01169 Uncharacterized protein family UPF0016 Vapar_5290 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Vapar_5291 PF00106 short chain dehydrogenase Vapar_5294 PF00571 CBS domain Vapar_5294 PF01380 SIS domain Vapar_5295 PF02254 TrkA-N domain Vapar_5295 PF02080 TrkA-C domain Vapar_5295 PF00999 Sodium/hydrogen exchanger family Vapar_5297 PF00027 Cyclic nucleotide-binding domain Vapar_5297 PF04960 Glutaminase Vapar_5297 PF01740 STAS domain Vapar_5298 PF12631 MnmE helical domain Vapar_5298 PF01926 50S ribosome-binding GTPase Vapar_5298 PF10396 GTP-binding protein TrmE N-terminus Vapar_5299 PF14849 YidC periplasmic domain Vapar_5299 PF02096 60Kd inner membrane protein Vapar_5300 PF01809 Putative membrane protein insertion efficiency factor Vapar_5301 PF00825 Ribonuclease P Vapar_5302 PF00468 Ribosomal protein L34 Vapar_5304 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_5304 PF03466 LysR substrate binding domain Vapar_5305 PF01613 Flavin reductase like domain Vapar_5306 PF08028 Acyl-CoA dehydrogenase, C-terminal domain Vapar_5306 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Vapar_5308 PF03466 LysR substrate binding domain Vapar_5308 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_5309 PF00465 Iron-containing alcohol dehydrogenase Vapar_5310 PF00775 Dioxygenase Vapar_5310 PF04444 Catechol dioxygenase N terminus Vapar_5312 PF07690 Major Facilitator Superfamily Vapar_5316 PF00392 Bacterial regulatory proteins, gntR family Vapar_5316 PF07729 FCD domain Vapar_5318 PF00005 ABC transporter Vapar_5319 PF02653 Branched-chain amino acid transport system / permease component Vapar_5321 PF13378 Enolase C-terminal domain-like Vapar_5321 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Vapar_5323 PF05336 L-rhamnose mutarotase Vapar_5326 PF00106 short chain dehydrogenase Vapar_5327 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_5328 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Vapar_5328 PF13378 Enolase C-terminal domain-like Vapar_5329 PF13378 Enolase C-terminal domain-like Vapar_5329 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Vapar_5330 PF03480 Bacterial extracellular solute-binding protein, family 7 Vapar_5331 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component Vapar_5332 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Vapar_5333 PF08240 Alcohol dehydrogenase GroES-like domain Vapar_5333 PF00107 Zinc-binding dehydrogenase Vapar_5334 PF17831 Pyruvate dehydrogenase E1 component middle domain Vapar_5334 PF00456 Transketolase, thiamine diphosphate binding domain Vapar_5335 PF00364 Biotin-requiring enzyme Vapar_5335 PF02817 e3 binding domain Vapar_5335 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Vapar_5336 PF07992 Pyridine nucleotide-disulphide oxidoreductase Vapar_5336 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Vapar_5337 PF00561 alpha/beta hydrolase fold Vapar_5338 PF00390 Malic enzyme, N-terminal domain Vapar_5338 PF01515 Phosphate acetyl/butaryl transferase Vapar_5338 PF03949 Malic enzyme, NAD binding domain Vapar_5339 PF00375 Sodium:dicarboxylate symporter family Vapar_5340 PF07992 Pyridine nucleotide-disulphide oxidoreductase Vapar_5341 PF02803 Thiolase, C-terminal domain Vapar_5341 PF00108 Thiolase, N-terminal domain Vapar_5342 PF00106 short chain dehydrogenase Vapar_5344 PF02743 Cache domain Vapar_5344 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vapar_5344 PF00512 His Kinase A (phospho-acceptor) domain Vapar_5345 PF00158 Sigma-54 interaction domain Vapar_5345 PF00072 Response regulator receiver domain Vapar_5345 PF02954 Bacterial regulatory protein, Fis family Vapar_5346 PF14759 Reductase C-terminal Vapar_5346 PF07992 Pyridine nucleotide-disulphide oxidoreductase Vapar_5347 PF00355 Rieske [2Fe-2S] domain Vapar_5348 PF13577 SnoaL-like domain Vapar_5349 PF00848 Ring hydroxylating alpha subunit (catalytic domain) Vapar_5349 PF00355 Rieske [2Fe-2S] domain Vapar_5350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_5350 PF03466 LysR substrate binding domain Vapar_5351 PF04752 ChaC-like protein Vapar_5352 PF00501 AMP-binding enzyme Vapar_5352 PF13193 AMP-binding enzyme C-terminal domain Vapar_5353 PF01323 DSBA-like thioredoxin domain Vapar_5354 PF00106 short chain dehydrogenase Vapar_5355 PF03060 Nitronate monooxygenase Vapar_5356 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Vapar_5356 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Vapar_5356 PF12806 Acetyl-CoA dehydrogenase C-terminal like Vapar_5356 PF02770 Acyl-CoA dehydrogenase, middle domain Vapar_5357 PF00108 Thiolase, N-terminal domain Vapar_5357 PF02803 Thiolase, C-terminal domain Vapar_5358 PF00440 Bacterial regulatory proteins, tetR family Vapar_5360 PF02321 Outer membrane efflux protein Vapar_5360 PF08139 Prokaryotic membrane lipoprotein lipid attachment site Vapar_5361 PF00440 Bacterial regulatory proteins, tetR family Vapar_5363 PF00873 AcrB/AcrD/AcrF family Vapar_5364 PF00106 short chain dehydrogenase Vapar_5365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_5365 PF03466 LysR substrate binding domain Vapar_5366 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin Vapar_5367 PF00501 AMP-binding enzyme Vapar_5367 PF16177 Acetyl-coenzyme A synthetase N-terminus Vapar_5367 PF13193 AMP-binding enzyme C-terminal domain Vapar_5369 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase Vapar_5370 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG Vapar_5372 PF01039 Carboxyl transferase domain Vapar_5373 PF06857 Malonate decarboxylase delta subunit (MdcD) Vapar_5374 PF16957 Malonate decarboxylase, alpha subunit, transporter Vapar_5377 PF03466 LysR substrate binding domain Vapar_5377 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_5378 PF12833 Helix-turn-helix domain Vapar_5380 PF01738 Dienelactone hydrolase family Vapar_5381 PF00175 Oxidoreductase NAD-binding domain Vapar_5381 PF00111 2Fe-2S iron-sulfur cluster binding domain Vapar_5382 PF00848 Ring hydroxylating alpha subunit (catalytic domain) Vapar_5382 PF00355 Rieske [2Fe-2S] domain Vapar_5383 PF00866 Ring hydroxylating beta subunit Vapar_5386 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_5387 PF01494 FAD binding domain Vapar_5388 PF03466 LysR substrate binding domain Vapar_5388 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_5395 PF16123 Hydroxyacylglutathione hydrolase C-terminus Vapar_5395 PF00753 Metallo-beta-lactamase superfamily Vapar_5396 PF02627 Carboxymuconolactone decarboxylase family Vapar_5399 PF00732 GMC oxidoreductase Vapar_5399 PF05199 GMC oxidoreductase Vapar_5401 PF00196 Bacterial regulatory proteins, luxR family Vapar_5402 PF00196 Bacterial regulatory proteins, luxR family Vapar_5403 PF00196 Bacterial regulatory proteins, luxR family Vapar_5403 PF00072 Response regulator receiver domain Vapar_5404 PF00196 Bacterial regulatory proteins, luxR family Vapar_5404 PF00072 Response regulator receiver domain Vapar_5409 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_5409 PF03466 LysR substrate binding domain Vapar_5410 PF00561 alpha/beta hydrolase fold Vapar_5412 PF01738 Dienelactone hydrolase family Vapar_5414 PF13409 Glutathione S-transferase, N-terminal domain Vapar_5415 PF01425 Amidase Vapar_5416 PF03301 Tryptophan 2,3-dioxygenase Vapar_5418 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Vapar_5419 PF03358 NADPH-dependent FMN reductase Vapar_5420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_5420 PF03466 LysR substrate binding domain Vapar_5424 PF09411 Lipid A 3-O-deacylase (PagL) Vapar_5425 PF02311 AraC-like ligand binding domain Vapar_5425 PF12833 Helix-turn-helix domain Vapar_5426 PF07690 Major Facilitator Superfamily Vapar_5427 PF02798 Glutathione S-transferase, N-terminal domain Vapar_5427 PF00043 Glutathione S-transferase, C-terminal domain Vapar_5431 PF02798 Glutathione S-transferase, N-terminal domain Vapar_5431 PF00043 Glutathione S-transferase, C-terminal domain Vapar_5435 PF02627 Carboxymuconolactone decarboxylase family Vapar_5436 PF05368 NmrA-like family Vapar_5439 PF00199 Catalase Vapar_5439 PF06628 Catalase-related immune-responsive Vapar_5440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_5440 PF03466 LysR substrate binding domain Vapar_5442 PF01757 Acyltransferase family Vapar_5445 PF00561 alpha/beta hydrolase fold Vapar_5448 PF00072 Response regulator receiver domain Vapar_5448 PF00486 Transcriptional regulatory protein, C terminal Vapar_5449 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vapar_5449 PF00989 PAS fold Vapar_5449 PF00512 His Kinase A (phospho-acceptor) domain Vapar_5449 PF16736 Single Cache-like Vapar_5452 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_5453 PF01212 Beta-eliminating lyase Vapar_5454 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_5454 PF03466 LysR substrate binding domain Vapar_5455 PF13378 Enolase C-terminal domain-like Vapar_5455 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Vapar_5456 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Vapar_5457 PF00576 HIUase/Transthyretin family Vapar_5458 PF00576 HIUase/Transthyretin family Vapar_5459 PF01014 Uricase Vapar_5459 PF09349 OHCU decarboxylase Vapar_5460 PF07690 Major Facilitator Superfamily Vapar_5461 PF03466 LysR substrate binding domain Vapar_5461 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_5463 PF00199 Catalase Vapar_5463 PF06628 Catalase-related immune-responsive Vapar_5467 PF00561 alpha/beta hydrolase fold Vapar_5468 PF07690 Major Facilitator Superfamily Vapar_5470 PF07969 Amidohydrolase family Vapar_5472 PF00857 Isochorismatase family Vapar_5473 PF17954 Quercetinase C-terminal cupin domain Vapar_5473 PF02678 Pirin Vapar_5474 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_5474 PF03466 LysR substrate binding domain Vapar_5476 PF00571 CBS domain Vapar_5478 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase Vapar_5478 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II Vapar_5478 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Vapar_5479 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Vapar_5479 PF07992 Pyridine nucleotide-disulphide oxidoreductase Vapar_5479 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Vapar_5482 PF07519 Tannase and feruloyl esterase Vapar_5484 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase Vapar_5485 PF00111 2Fe-2S iron-sulfur cluster binding domain Vapar_5485 PF01799 [2Fe-2S] binding domain Vapar_5488 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Vapar_5488 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase Vapar_5489 PF00941 FAD binding domain in molybdopterin dehydrogenase Vapar_5489 PF03450 CO dehydrogenase flavoprotein C-terminal domain Vapar_5490 PF10518 TAT (twin-arginine translocation) pathway signal sequence Vapar_5490 PF00111 2Fe-2S iron-sulfur cluster binding domain Vapar_5490 PF01799 [2Fe-2S] binding domain Vapar_5491 PF12833 Helix-turn-helix domain Vapar_5491 PF06719 AraC-type transcriptional regulator N-terminus Vapar_5492 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_5494 PF13577 SnoaL-like domain Vapar_5497 PF13607 Succinyl-CoA ligase like flavodoxin domain Vapar_5497 PF13380 CoA binding domain Vapar_5497 PF00583 Acetyltransferase (GNAT) family Vapar_5498 PF00378 Enoyl-CoA hydratase/isomerase Vapar_5500 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Vapar_5500 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Vapar_5500 PF02770 Acyl-CoA dehydrogenase, middle domain Vapar_5501 PF01613 Flavin reductase like domain Vapar_5502 PF00296 Luciferase-like monooxygenase Vapar_5503 PF03466 LysR substrate binding domain Vapar_5503 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_5507 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_5512 PF02515 CoA-transferase family III Vapar_5513 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Vapar_5513 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Vapar_5514 PF00732 GMC oxidoreductase Vapar_5514 PF05199 GMC oxidoreductase Vapar_5516 PF00005 ABC transporter Vapar_5517 PF00528 Binding-protein-dependent transport system inner membrane component Vapar_5519 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Vapar_5519 PF13378 Enolase C-terminal domain-like Vapar_5523 PF01915 Glycosyl hydrolase family 3 C-terminal domain Vapar_5523 PF00933 Glycosyl hydrolase family 3 N terminal domain Vapar_5523 PF14310 Fibronectin type III-like domain Vapar_5526 PF06472 ABC transporter transmembrane region 2 Vapar_5526 PF00005 ABC transporter Vapar_5528 PF00128 Alpha amylase, catalytic domain Vapar_5531 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_5532 PF00701 Dihydrodipicolinate synthetase family Vapar_5534 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Vapar_5534 PF13378 Enolase C-terminal domain-like Vapar_5535 PF00528 Binding-protein-dependent transport system inner membrane component Vapar_5536 PF00528 Binding-protein-dependent transport system inner membrane component Vapar_5537 PF08402 TOBE domain Vapar_5537 PF00005 ABC transporter Vapar_5539 PF07729 FCD domain Vapar_5539 PF00392 Bacterial regulatory proteins, gntR family Vapar_5541 PF02311 AraC-like ligand binding domain Vapar_5541 PF12833 Helix-turn-helix domain Vapar_5542 PF14492 Elongation Factor G, domain II Vapar_5542 PF03764 Elongation factor G, domain IV Vapar_5542 PF00009 Elongation factor Tu GTP binding domain Vapar_5542 PF00679 Elongation factor G C-terminus Vapar_5545 PF02652 L-lactate permease Vapar_5547 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_5548 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Vapar_5548 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Vapar_5548 PF00205 Thiamine pyrophosphate enzyme, central domain Vapar_5551 PF00106 short chain dehydrogenase Vapar_5552 PF00724 NADH:flavin oxidoreductase / NADH oxidase family Vapar_5556 PF00072 Response regulator receiver domain Vapar_5556 PF00196 Bacterial regulatory proteins, luxR family Vapar_5557 PF07690 Major Facilitator Superfamily Vapar_5558 PF17200 Single Cache domain 2 Vapar_5558 PF07730 Histidine kinase Vapar_5560 PF05658 Head domain of trimeric autotransporter adhesin Vapar_5560 PF13018 Extended Signal Peptide of Type V secretion system Vapar_5560 PF03895 YadA-like membrane anchor domain Vapar_5560 PF05662 Coiled stalk of trimeric autotransporter adhesin Vapar_5561 PF01389 OmpA-like transmembrane domain Vapar_5561 PF00691 OmpA family Vapar_5565 PF03060 Nitronate monooxygenase Vapar_5566 PF00753 Metallo-beta-lactamase superfamily Vapar_5568 PF04143 Sulphur transport Vapar_5571 PF01569 PAP2 superfamily Vapar_5572 PF00535 Glycosyl transferase family 2 Vapar_5573 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase Vapar_5575 PF00027 Cyclic nucleotide-binding domain Vapar_5575 PF00325 Bacterial regulatory proteins, crp family Vapar_5576 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Vapar_5576 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Vapar_5577 PF00582 Universal stress protein family Vapar_5579 PF00072 Response regulator receiver domain Vapar_5579 PF00486 Transcriptional regulatory protein, C terminal Vapar_5580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vapar_5580 PF13426 PAS domain Vapar_5580 PF00072 Response regulator receiver domain Vapar_5583 PF03466 LysR substrate binding domain Vapar_5583 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_5584 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_5585 PF03737 Aldolase/RraA Vapar_5586 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Vapar_5586 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Vapar_5587 PF16653 Saccharopine dehydrogenase C-terminal domain Vapar_5587 PF03435 Saccharopine dehydrogenase NADP binding domain Vapar_5588 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Vapar_5588 PF00205 Thiamine pyrophosphate enzyme, central domain Vapar_5588 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Vapar_5589 PF01266 FAD dependent oxidoreductase Vapar_5591 PF00528 Binding-protein-dependent transport system inner membrane component Vapar_5592 PF00005 ABC transporter Vapar_5594 PF01037 Lrp/AsnC ligand binding domain Vapar_5596 PF03466 LysR substrate binding domain Vapar_5596 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_5597 PF01042 Endoribonuclease L-PSP Vapar_5598 PF00392 Bacterial regulatory proteins, gntR family Vapar_5598 PF07729 FCD domain Vapar_5599 PF00180 Isocitrate/isopropylmalate dehydrogenase Vapar_5599 PF03737 Aldolase/RraA Vapar_5600 PF07729 FCD domain Vapar_5600 PF00392 Bacterial regulatory proteins, gntR family Vapar_5601 PF01979 Amidohydrolase family Vapar_5604 PF00701 Dihydrodipicolinate synthetase family Vapar_5605 PF07992 Pyridine nucleotide-disulphide oxidoreductase Vapar_5605 PF04324 BFD-like [2Fe-2S] binding domain Vapar_5606 PF07687 Peptidase dimerisation domain Vapar_5606 PF01546 Peptidase family M20/M25/M40 Vapar_5607 PF00005 ABC transporter Vapar_5610 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_5611 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_5614 PF05683 Fumarase C-terminus Vapar_5614 PF05681 Fumarate hydratase (Fumerase) Vapar_5615 PF00890 FAD binding domain Vapar_5615 PF02910 Fumarate reductase flavoprotein C-term Vapar_5618 PF13183 4Fe-4S dicluster domain Vapar_5618 PF13085 2Fe-2S iron-sulfur cluster binding domain Vapar_5622 PF03466 LysR substrate binding domain Vapar_5622 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_5623 PF01425 Amidase Vapar_5624 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_5625 PF07690 Major Facilitator Superfamily Vapar_5628 PF01037 Lrp/AsnC ligand binding domain Vapar_5629 PF00202 Aminotransferase class-III Vapar_5630 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Vapar_5633 PF01266 FAD dependent oxidoreductase Vapar_5634 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Vapar_5635 PF00528 Binding-protein-dependent transport system inner membrane component Vapar_5636 PF12911 N-terminal TM domain of oligopeptide transport permease C Vapar_5636 PF00528 Binding-protein-dependent transport system inner membrane component Vapar_5637 PF00005 ABC transporter Vapar_5637 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Vapar_5638 PF00180 Isocitrate/isopropylmalate dehydrogenase Vapar_5639 PF00171 Aldehyde dehydrogenase family Vapar_5640 PF00376 MerR family regulatory protein Vapar_5640 PF09278 MerR, DNA binding Vapar_5641 PF00293 NUDIX domain Vapar_5644 PF00392 Bacterial regulatory proteins, gntR family Vapar_5644 PF00155 Aminotransferase class I and II Vapar_5650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_5650 PF03466 LysR substrate binding domain Vapar_5651 PF02515 CoA-transferase family III Vapar_5652 PF00775 Dioxygenase Vapar_5652 PF04444 Catechol dioxygenase N terminus Vapar_5654 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_5655 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_5656 PF13427 Domain of unknown function (DUF4111) Vapar_5656 PF01909 Nucleotidyltransferase domain Vapar_5658 PF16655 PhoD-like phosphatase, N-terminal domain Vapar_5658 PF09423 PhoD-like phosphatase Vapar_5662 PF00135 Carboxylesterase family Vapar_5663 PF12833 Helix-turn-helix domain Vapar_5663 PF12852 Cupin Vapar_5667 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Vapar_5668 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component Vapar_5668 PF03480 Bacterial extracellular solute-binding protein, family 7 Vapar_5669 PF00501 AMP-binding enzyme Vapar_5669 PF13193 AMP-binding enzyme C-terminal domain Vapar_5674 PF03466 LysR substrate binding domain Vapar_5674 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_5675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_5675 PF03466 LysR substrate binding domain Vapar_5676 PF00701 Dihydrodipicolinate synthetase family Vapar_5677 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_5679 PF13378 Enolase C-terminal domain-like Vapar_5680 PF04717 Type VI secretion system, phage-baseplate injector Vapar_5681 PF05593 RHS Repeat Vapar_5681 PF03527 RHS protein Vapar_5681 PF14220 Domain of unknown function (DUF4329) Vapar_5686 PF07731 Multicopper oxidase Vapar_5686 PF07732 Multicopper oxidase Vapar_5690 PF00171 Aldehyde dehydrogenase family Vapar_5691 PF00072 Response regulator receiver domain Vapar_5691 PF00990 Diguanylate cyclase, GGDEF domain Vapar_5692 PF07690 Major Facilitator Superfamily Vapar_5693 PF00355 Rieske [2Fe-2S] domain Vapar_5694 PF00111 2Fe-2S iron-sulfur cluster binding domain Vapar_5694 PF00175 Oxidoreductase NAD-binding domain Vapar_5695 PF01047 MarR family Vapar_5697 PF00920 Dehydratase family Vapar_5698 PF03328 HpcH/HpaI aldolase/citrate lyase family Vapar_5699 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_5700 PF08501 Shikimate dehydrogenase substrate binding domain Vapar_5700 PF01488 Shikimate / quinate 5-dehydrogenase Vapar_5700 PF18317 Shikimate 5'-dehydrogenase C-terminal domain Vapar_5701 PF00528 Binding-protein-dependent transport system inner membrane component Vapar_5702 PF00528 Binding-protein-dependent transport system inner membrane component Vapar_5704 PF00392 Bacterial regulatory proteins, gntR family Vapar_5704 PF07729 FCD domain Vapar_5705 PF08402 TOBE domain Vapar_5705 PF00005 ABC transporter Vapar_5709 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_5710 PF03737 Aldolase/RraA Vapar_5711 PF00920 Dehydratase family Vapar_5712 PF00392 Bacterial regulatory proteins, gntR family Vapar_5712 PF07729 FCD domain Vapar_5714 PF08659 KR domain Vapar_5714 PF00107 Zinc-binding dehydrogenase Vapar_5714 PF16197 Ketoacyl-synthetase C-terminal extension Vapar_5714 PF00109 Beta-ketoacyl synthase, N-terminal domain Vapar_5714 PF02801 Beta-ketoacyl synthase, C-terminal domain Vapar_5714 PF00698 Acyl transferase domain Vapar_5714 PF14765 Polyketide synthase dehydratase Vapar_5714 PF00550 Phosphopantetheine attachment site Vapar_5714 PF08240 Alcohol dehydrogenase GroES-like domain Vapar_5716 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_5717 PF01557 Fumarylacetoacetate (FAA) hydrolase family Vapar_5720 PF03358 NADPH-dependent FMN reductase Vapar_5721 PF03480 Bacterial extracellular solute-binding protein, family 7 Vapar_5722 PF01220 Dehydroquinase class II Vapar_5723 PF03480 Bacterial extracellular solute-binding protein, family 7 Vapar_5729 PF03741 Integral membrane protein TerC family Vapar_5738 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Vapar_5741 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_5742 PF03737 Aldolase/RraA Vapar_5743 PF04909 Amidohydrolase Vapar_5744 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_5744 PF03466 LysR substrate binding domain Vapar_5745 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase Vapar_5745 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase Vapar_5747 PF03466 LysR substrate binding domain Vapar_5747 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_5750 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_5751 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_5752 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Vapar_5752 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Vapar_5754 PF00557 Metallopeptidase family M24 Vapar_5758 PF02777 Iron/manganese superoxide dismutases, C-terminal domain Vapar_5761 PF02515 CoA-transferase family III Vapar_5762 PF12852 Cupin Vapar_5762 PF12833 Helix-turn-helix domain Vapar_5763 PF13193 AMP-binding enzyme C-terminal domain Vapar_5763 PF00501 AMP-binding enzyme Vapar_5769 PF13452 N-terminal half of MaoC dehydratase Vapar_5773 PF00501 AMP-binding enzyme Vapar_5773 PF13193 AMP-binding enzyme C-terminal domain Vapar_5774 PF00378 Enoyl-CoA hydratase/isomerase Vapar_5776 PF02803 Thiolase, C-terminal domain Vapar_5776 PF00108 Thiolase, N-terminal domain Vapar_5777 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_5778 PF08241 Methyltransferase domain Vapar_5779 PF03551 Transcriptional regulator PadR-like family Vapar_5779 PF13847 Methyltransferase domain Vapar_5780 PF00561 alpha/beta hydrolase fold Vapar_5787 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_5787 PF03466 LysR substrate binding domain Vapar_5788 PF00561 alpha/beta hydrolase fold Vapar_5789 PF00106 short chain dehydrogenase Vapar_5792 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_5794 PF12805 FUSC-like inner membrane protein yccS Vapar_5796 PF01965 DJ-1/PfpI family Vapar_5799 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_5799 PF03466 LysR substrate binding domain Vapar_5801 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_5802 PF03737 Aldolase/RraA Vapar_5805 PF13404 AsnC-type helix-turn-helix domain Vapar_5805 PF01037 Lrp/AsnC ligand binding domain Vapar_5806 PF04715 Anthranilate synthase component I, N terminal region Vapar_5806 PF00425 chorismate binding enzyme Vapar_5806 PF00117 Glutamine amidotransferase class-I Vapar_5808 PF00765 Autoinducer synthase Vapar_5809 PF00196 Bacterial regulatory proteins, luxR family Vapar_5809 PF03472 Autoinducer binding domain Vapar_5810 PF01965 DJ-1/PfpI family Vapar_5810 PF12833 Helix-turn-helix domain Vapar_5811 PF17762 HTH domain found in ParB protein Vapar_5811 PF02195 ParB-like nuclease domain Vapar_5812 PF13614 AAA domain Vapar_5816 PF03135 CagE, TrbE, VirB family, component of type IV transporter system Vapar_5817 PF07996 Type IV secretion system proteins Vapar_5820 PF03524 Conjugal transfer protein Vapar_5821 PF03743 Bacterial conjugation TrbI-like protein Vapar_5822 PF00437 Type II/IV secretion system protein Vapar_5823 PF02534 Type IV secretory system Conjugative DNA transfer Vapar_5830 PF04221 RelB antitoxin Vapar_5838 PF12951 Passenger-associated-transport-repeat Vapar_5838 PF12951 Passenger-associated-transport-repeat Vapar_5841 PF10091 Putative glucoamylase Vapar_5841 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain Vapar_5841 PF06165 Glycosyltransferase family 36 Vapar_5842 PF00497 Bacterial extracellular solute-binding proteins, family 3 Vapar_5843 PF00528 Binding-protein-dependent transport system inner membrane component Vapar_5844 PF00528 Binding-protein-dependent transport system inner membrane component Vapar_5846 PF00005 ABC transporter Vapar_5849 PF01695 IstB-like ATP binding protein Vapar_5850 PF00665 Integrase core domain Vapar_5866 PF03466 LysR substrate binding domain Vapar_5866 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_5871 PF00501 AMP-binding enzyme Vapar_5871 PF13193 AMP-binding enzyme C-terminal domain Vapar_5872 PF00378 Enoyl-CoA hydratase/isomerase Vapar_5873 PF02803 Thiolase, C-terminal domain Vapar_5873 PF00108 Thiolase, N-terminal domain Vapar_5874 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Vapar_5874 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Vapar_5874 PF00378 Enoyl-CoA hydratase/isomerase Vapar_5876 PF00378 Enoyl-CoA hydratase/isomerase Vapar_5877 PF02515 CoA-transferase family III Vapar_5878 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_5880 PF04909 Amidohydrolase Vapar_5882 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_5882 PF03466 LysR substrate binding domain Vapar_5884 PF00144 Beta-lactamase Vapar_5885 PF01546 Peptidase family M20/M25/M40 Vapar_5885 PF07687 Peptidase dimerisation domain Vapar_5886 PF00171 Aldehyde dehydrogenase family Vapar_5887 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_5888 PF01370 NAD dependent epimerase/dehydratase family Vapar_5889 PF13378 Enolase C-terminal domain-like Vapar_5889 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Vapar_5890 PF13609 Gram-negative porin Vapar_5891 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_5893 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_5893 PF03466 LysR substrate binding domain Vapar_5895 PF01799 [2Fe-2S] binding domain Vapar_5895 PF00111 2Fe-2S iron-sulfur cluster binding domain Vapar_5896 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase Vapar_5917 PF07804 HipA-like C-terminal domain Vapar_5917 PF13657 HipA N-terminal domain Vapar_5924 PF00403 Heavy-metal-associated domain Vapar_5924 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Vapar_5924 PF07992 Pyridine nucleotide-disulphide oxidoreductase Vapar_5927 PF13609 Gram-negative porin Vapar_5928 PF17926 Tetracyclin repressor-like, C-terminal domain Vapar_5928 PF00440 Bacterial regulatory proteins, tetR family Vapar_5930 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_5936 PF13657 HipA N-terminal domain Vapar_5936 PF07804 HipA-like C-terminal domain Vapar_5938 PF04760 Translation initiation factor IF-2, N-terminal region Vapar_5938 PF08364 Bacterial translation initiation factor IF-2 associated region Vapar_5938 PF11987 Translation-initiation factor 2 Vapar_5938 PF00009 Elongation factor Tu GTP binding domain Vapar_5941 PF00486 Transcriptional regulatory protein, C terminal Vapar_5941 PF00072 Response regulator receiver domain Vapar_5946 PF03466 LysR substrate binding domain Vapar_5946 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_5947 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Vapar_5948 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Vapar_5948 PF00005 ABC transporter Vapar_5949 PF12911 N-terminal TM domain of oligopeptide transport permease C Vapar_5949 PF00528 Binding-protein-dependent transport system inner membrane component Vapar_5950 PF00528 Binding-protein-dependent transport system inner membrane component Vapar_5953 PF03466 LysR substrate binding domain Vapar_5953 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_5957 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Vapar_5957 PF00529 HlyD membrane-fusion protein of T1SS Vapar_5958 PF00664 ABC transporter transmembrane region Vapar_5958 PF00005 ABC transporter Vapar_5961 PF13609 Gram-negative porin Vapar_5962 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_5963 PF02492 CobW/HypB/UreG, nucleotide-binding domain Vapar_5963 PF07683 Cobalamin synthesis protein cobW C-terminal domain Vapar_5965 PF02538 Hydantoinase B/oxoprolinase Vapar_5966 PF05378 Hydantoinase/oxoprolinase N-terminal region Vapar_5966 PF01968 Hydantoinase/oxoprolinase Vapar_5967 PF01557 Fumarylacetoacetate (FAA) hydrolase family Vapar_5968 PF03466 LysR substrate binding domain Vapar_5968 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_5972 PF00005 ABC transporter Vapar_5973 PF12399 Branched-chain amino acid ATP-binding cassette transporter Vapar_5973 PF00005 ABC transporter Vapar_5974 PF11862 Domain of unknown function (DUF3382) Vapar_5974 PF02653 Branched-chain amino acid transport system / permease component Vapar_5975 PF02653 Branched-chain amino acid transport system / permease component Vapar_5976 PF13193 AMP-binding enzyme C-terminal domain Vapar_5976 PF00501 AMP-binding enzyme Vapar_5977 PF00171 Aldehyde dehydrogenase family Vapar_5982 PF13817 IS66 C-terminal element Vapar_5982 PF03050 Transposase IS66 family Vapar_5982 PF13007 Transposase C of IS166 homeodomain Vapar_5982 PF13005 zinc-finger binding domain of transposase IS66 Vapar_5992 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vapar_5992 PF00512 His Kinase A (phospho-acceptor) domain Vapar_5992 PF07689 KaiB domain Vapar_6002 PF02261 Aspartate decarboxylase Vapar_6006 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Vapar_6006 PF00005 ABC transporter Vapar_6007 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Vapar_6007 PF00005 ABC transporter Vapar_6009 PF00528 Binding-protein-dependent transport system inner membrane component Vapar_6010 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Vapar_6011 PF03576 Peptidase family S58 Vapar_6013 PF03449 Transcription elongation factor, N-terminal Vapar_6013 PF01272 Transcription elongation factor, GreA/GreB, C-term Vapar_6015 PF00136 DNA polymerase family B Vapar_6015 PF03104 DNA polymerase family B, exonuclease domain Vapar_6017 PF08447 PAS fold Vapar_6017 PF05231 MASE1 Vapar_6017 PF00990 Diguanylate cyclase, GGDEF domain Vapar_6017 PF00563 EAL domain Vapar_6017 PF13426 PAS domain Vapar_6017 PF08448 PAS fold Vapar_6020 PF01970 Tripartite tricarboxylate transporter TctA family Vapar_6024 PF04055 Radical SAM superfamily Vapar_6025 PF00561 alpha/beta hydrolase fold Vapar_6028 PF08450 SMP-30/Gluconolactonase/LRE-like region Vapar_6029 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_6030 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_6031 PF05035 2-keto-3-deoxy-galactonokinase Vapar_6032 PF13378 Enolase C-terminal domain-like Vapar_6032 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Vapar_6033 PF00701 Dihydrodipicolinate synthetase family Vapar_6035 PF00583 Acetyltransferase (GNAT) family Vapar_6037 PF00248 Aldo/keto reductase family Vapar_6038 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_6038 PF03466 LysR substrate binding domain Vapar_6042 PF02233 NAD(P) transhydrogenase beta subunit Vapar_6043 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch Vapar_6044 PF05222 Alanine dehydrogenase/PNT, N-terminal domain Vapar_6044 PF01262 Alanine dehydrogenase/PNT, C-terminal domain Vapar_6045 PF00857 Isochorismatase family Vapar_6046 PF01361 Tautomerase enzyme Vapar_6048 PF01979 Amidohydrolase family Vapar_6050 PF02558 Ketopantoate reductase PanE/ApbA Vapar_6050 PF02317 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain Vapar_6051 PF00005 ABC transporter Vapar_6052 PF00528 Binding-protein-dependent transport system inner membrane component Vapar_6054 PF07729 FCD domain Vapar_6054 PF00392 Bacterial regulatory proteins, gntR family Vapar_6056 PF02492 CobW/HypB/UreG, nucleotide-binding domain Vapar_6056 PF07683 Cobalamin synthesis protein cobW C-terminal domain Vapar_6058 PF01979 Amidohydrolase family Vapar_6059 PF00557 Metallopeptidase family M24 Vapar_6059 PF01321 Creatinase/Prolidase N-terminal domain Vapar_6060 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Vapar_6060 PF13378 Enolase C-terminal domain-like Vapar_6063 PF01979 Amidohydrolase family Vapar_6064 PF12697 Alpha/beta hydrolase family Vapar_6065 PF01557 Fumarylacetoacetate (FAA) hydrolase family Vapar_6068 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_6069 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_6070 PF01425 Amidase Vapar_6071 PF03737 Aldolase/RraA Vapar_6072 PF03466 LysR substrate binding domain Vapar_6072 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_6077 PF03458 UPF0126 domain Vapar_6079 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_6080 PF00440 Bacterial regulatory proteins, tetR family Vapar_6082 PF08240 Alcohol dehydrogenase GroES-like domain Vapar_6082 PF00107 Zinc-binding dehydrogenase Vapar_6083 PF00106 short chain dehydrogenase Vapar_6083 PF00561 alpha/beta hydrolase fold Vapar_6084 PF00561 alpha/beta hydrolase fold Vapar_6084 PF08386 TAP-like protein Vapar_6086 PF13657 HipA N-terminal domain Vapar_6086 PF07804 HipA-like C-terminal domain Vapar_6088 PF00005 ABC transporter Vapar_6089 PF00528 Binding-protein-dependent transport system inner membrane component Vapar_6091 PF00005 ABC transporter Vapar_6092 PF07969 Amidohydrolase family Vapar_6093 PF00005 ABC transporter Vapar_6094 PF00005 ABC transporter Vapar_6095 PF06007 Phosphonate metabolism protein PhnJ Vapar_6096 PF05861 Bacterial phosphonate metabolism protein (PhnI) Vapar_6098 PF06754 Phosphonate metabolism protein PhnG Vapar_6099 PF00392 Bacterial regulatory proteins, gntR family Vapar_6100 PF06299 Protein of unknown function (DUF1045) Vapar_6103 PF13493 Domain of unknown function (DUF4118) Vapar_6103 PF00512 His Kinase A (phospho-acceptor) domain Vapar_6103 PF00989 PAS fold Vapar_6103 PF08447 PAS fold Vapar_6103 PF13426 PAS domain Vapar_6103 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vapar_6104 PF03707 Bacterial signalling protein N terminal repeat Vapar_6104 PF00563 EAL domain Vapar_6104 PF00990 Diguanylate cyclase, GGDEF domain Vapar_6105 PF03480 Bacterial extracellular solute-binding protein, family 7 Vapar_6106 PF03707 Bacterial signalling protein N terminal repeat Vapar_6106 PF00990 Diguanylate cyclase, GGDEF domain Vapar_6106 PF00563 EAL domain Vapar_6108 PF13614 AAA domain Vapar_6108 PF00376 MerR family regulatory protein Vapar_6109 PF02195 ParB-like nuclease domain Vapar_6109 PF17762 HTH domain found in ParB protein Vapar_6113 PF04909 Amidohydrolase Vapar_6114 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_6114 PF03466 LysR substrate binding domain Vapar_6115 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_6120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vapar_6120 PF00512 His Kinase A (phospho-acceptor) domain Vapar_6121 PF00072 Response regulator receiver domain Vapar_6121 PF00196 Bacterial regulatory proteins, luxR family Vapar_6122 PF04116 Fatty acid hydroxylase superfamily Vapar_6123 PF00144 Beta-lactamase Vapar_6126 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_6126 PF03466 LysR substrate binding domain Vapar_6130 PF00171 Aldehyde dehydrogenase family Vapar_6131 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_6132 PF00465 Iron-containing alcohol dehydrogenase Vapar_6134 PF00005 ABC transporter Vapar_6135 PF00005 ABC transporter Vapar_6138 PF04444 Catechol dioxygenase N terminus Vapar_6138 PF00775 Dioxygenase Vapar_6141 PF00356 Bacterial regulatory proteins, lacI family Vapar_6141 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family Vapar_6142 PF02447 GntP family permease Vapar_6143 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Vapar_6143 PF00370 FGGY family of carbohydrate kinases, N-terminal domain Vapar_6144 PF12833 Helix-turn-helix domain Vapar_6144 PF17853 GGDEF-like domain Vapar_6145 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_6146 PF00378 Enoyl-CoA hydratase/isomerase Vapar_6147 PF13380 CoA binding domain Vapar_6147 PF13607 Succinyl-CoA ligase like flavodoxin domain Vapar_6147 PF00583 Acetyltransferase (GNAT) family Vapar_6148 PF03972 MmgE/PrpD family Vapar_6149 PF07519 Tannase and feruloyl esterase Vapar_6150 PF13545 Crp-like helix-turn-helix domain Vapar_6150 PF00027 Cyclic nucleotide-binding domain Vapar_6151 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_6151 PF03466 LysR substrate binding domain Vapar_6154 PF04909 Amidohydrolase Vapar_6156 PF02515 CoA-transferase family III Vapar_6157 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_6158 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Vapar_6158 PF02770 Acyl-CoA dehydrogenase, middle domain Vapar_6158 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Vapar_6159 PF00378 Enoyl-CoA hydratase/isomerase Vapar_6160 PF05231 MASE1 Vapar_6160 PF08447 PAS fold Vapar_6160 PF00990 Diguanylate cyclase, GGDEF domain Vapar_6160 PF08448 PAS fold Vapar_6160 PF13426 PAS domain Vapar_6160 PF00563 EAL domain Vapar_6161 PF06441 Epoxide hydrolase N terminus Vapar_6166 PF00196 Bacterial regulatory proteins, luxR family Vapar_6166 PF00072 Response regulator receiver domain Vapar_6167 PF00196 Bacterial regulatory proteins, luxR family Vapar_6168 PF00512 His Kinase A (phospho-acceptor) domain Vapar_6168 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vapar_6168 PF00672 HAMP domain Vapar_6169 PF00072 Response regulator receiver domain Vapar_6169 PF00196 Bacterial regulatory proteins, luxR family Vapar_6170 PF00512 His Kinase A (phospho-acceptor) domain Vapar_6170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vapar_6170 PF13493 Domain of unknown function (DUF4118) Vapar_6170 PF08447 PAS fold Vapar_6170 PF13426 PAS domain Vapar_6170 PF00989 PAS fold Vapar_6172 PF17991 Thioredoxin like C-terminal domain Vapar_6172 PF02683 Cytochrome C biogenesis protein transmembrane region Vapar_6172 PF00578 AhpC/TSA family Vapar_6173 PF17754 MftR C-terminal domain Vapar_6173 PF00440 Bacterial regulatory proteins, tetR family Vapar_6174 PF00550 Phosphopantetheine attachment site Vapar_6174 PF00107 Zinc-binding dehydrogenase Vapar_6174 PF08659 KR domain Vapar_6174 PF14765 Polyketide synthase dehydratase Vapar_6174 PF08240 Alcohol dehydrogenase GroES-like domain Vapar_6174 PF02801 Beta-ketoacyl synthase, C-terminal domain Vapar_6174 PF00109 Beta-ketoacyl synthase, N-terminal domain Vapar_6174 PF00698 Acyl transferase domain Vapar_6174 PF16197 Ketoacyl-synthetase C-terminal extension Vapar_6177 PF00378 Enoyl-CoA hydratase/isomerase Vapar_6178 PF00440 Bacterial regulatory proteins, tetR family Vapar_6179 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_6181 PF00501 AMP-binding enzyme Vapar_6181 PF13193 AMP-binding enzyme C-terminal domain Vapar_6182 PF03466 LysR substrate binding domain Vapar_6182 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_6183 PF01970 Tripartite tricarboxylate transporter TctA family Vapar_6185 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_6186 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_6187 PF10282 Lactonase, 7-bladed beta-propeller Vapar_6188 PF00694 Aconitase C-terminal domain Vapar_6188 PF00330 Aconitase family (aconitate hydratase) Vapar_6191 PF03466 LysR substrate binding domain Vapar_6191 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_6193 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_6194 PF14031 Putative serine dehydratase domain Vapar_6194 PF01168 Alanine racemase, N-terminal domain Vapar_6199 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_6199 PF03466 LysR substrate binding domain Vapar_6200 PF07690 Major Facilitator Superfamily Vapar_6201 PF00561 alpha/beta hydrolase fold Vapar_6203 PF02627 Carboxymuconolactone decarboxylase family Vapar_6204 PF00440 Bacterial regulatory proteins, tetR family Vapar_6205 PF00106 short chain dehydrogenase Vapar_6206 PF00107 Zinc-binding dehydrogenase Vapar_6206 PF08240 Alcohol dehydrogenase GroES-like domain Vapar_6210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_6210 PF03466 LysR substrate binding domain Vapar_6211 PF09277 Erythronolide synthase, docking Vapar_6211 PF00698 Acyl transferase domain Vapar_6211 PF08240 Alcohol dehydrogenase GroES-like domain Vapar_6211 PF08990 Erythronolide synthase docking Vapar_6211 PF14765 Polyketide synthase dehydratase Vapar_6211 PF00550 Phosphopantetheine attachment site Vapar_6211 PF08659 KR domain Vapar_6211 PF00109 Beta-ketoacyl synthase, N-terminal domain Vapar_6211 PF16197 Ketoacyl-synthetase C-terminal extension Vapar_6211 PF02801 Beta-ketoacyl synthase, C-terminal domain Vapar_6214 PF02515 CoA-transferase family III Vapar_6217 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_6219 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Vapar_6219 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Vapar_6219 PF02770 Acyl-CoA dehydrogenase, middle domain Vapar_6221 PF13193 AMP-binding enzyme C-terminal domain Vapar_6221 PF00501 AMP-binding enzyme Vapar_6222 PF00881 Nitroreductase family Vapar_6224 PF01252 Signal peptidase (SPase) II Vapar_6230 PF07728 AAA domain (dynein-related subfamily) Vapar_6231 PF13569 Domain of unknown function (DUF4132) Vapar_6233 PF05762 VWA domain containing CoxE-like protein Vapar_6236 PF00589 Phage integrase family Vapar_6236 PF02899 Phage integrase, N-terminal SAM-like domain Vapar_6246 PF12801 4Fe-4S binding domain Vapar_6246 PF04205 FMN-binding domain Vapar_6247 PF12706 Beta-lactamase superfamily domain Vapar_6248 PF02954 Bacterial regulatory protein, Fis family Vapar_6248 PF13426 PAS domain Vapar_6248 PF00158 Sigma-54 interaction domain Vapar_6251 PF00501 AMP-binding enzyme Vapar_6251 PF13193 AMP-binding enzyme C-terminal domain Vapar_6251 PF16177 Acetyl-coenzyme A synthetase N-terminus Vapar_6256 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Vapar_6256 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Vapar_6257 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_6259 PF01209 ubiE/COQ5 methyltransferase family Vapar_6260 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_6261 PF00920 Dehydratase family Vapar_6262 PF04909 Amidohydrolase Vapar_6263 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_6263 PF03466 LysR substrate binding domain Vapar_6264 PF00701 Dihydrodipicolinate synthetase family Vapar_6266 PF00528 Binding-protein-dependent transport system inner membrane component Vapar_6267 PF00528 Binding-protein-dependent transport system inner membrane component Vapar_6268 PF08402 TOBE domain Vapar_6268 PF00005 ABC transporter Vapar_6269 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Vapar_6269 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Vapar_6270 PF00561 alpha/beta hydrolase fold Vapar_6271 PF00171 Aldehyde dehydrogenase family Vapar_6278 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_6279 PF00180 Isocitrate/isopropylmalate dehydrogenase Vapar_6280 PF07729 FCD domain Vapar_6280 PF00392 Bacterial regulatory proteins, gntR family Vapar_6283 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family Vapar_6283 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain Vapar_6284 PF00795 Carbon-nitrogen hydrolase Vapar_6284 PF02540 NAD synthase Vapar_6285 PF01467 Cytidylyltransferase-like Vapar_6285 PF00293 NUDIX domain Vapar_6286 PF03747 ADP-ribosylglycohydrolase Vapar_6287 PF07519 Tannase and feruloyl esterase Vapar_6288 PF00486 Transcriptional regulatory protein, C terminal Vapar_6288 PF00072 Response regulator receiver domain Vapar_6289 PF00512 His Kinase A (phospho-acceptor) domain Vapar_6289 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vapar_6290 PF03741 Integral membrane protein TerC family Vapar_6295 PF09382 RQC domain Vapar_6295 PF16124 RecQ zinc-binding Vapar_6295 PF00270 DEAD/DEAH box helicase Vapar_6295 PF00570 HRDC domain Vapar_6295 PF00271 Helicase conserved C-terminal domain Vapar_6297 PF04304 Protein of unknown function (DUF454) Vapar_6299 PF00873 AcrB/AcrD/AcrF family Vapar_6300 PF00529 HlyD membrane-fusion protein of T1SS Vapar_6300 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Vapar_6303 PF07995 Glucose / Sorbosone dehydrogenase Vapar_6305 PF05114 Protein of unknown function (DUF692) Vapar_6309 PF00355 Rieske [2Fe-2S] domain Vapar_6310 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_6311 PF07690 Major Facilitator Superfamily Vapar_6312 PF05973 Phage derived protein Gp49-like (DUF891) Vapar_6313 PF01381 Helix-turn-helix Vapar_6314 PF00106 short chain dehydrogenase Vapar_6315 PF04542 Sigma-70 region 2 Vapar_6315 PF08281 Sigma-70, region 4 Vapar_6320 PF01799 [2Fe-2S] binding domain Vapar_6320 PF00111 2Fe-2S iron-sulfur cluster binding domain Vapar_6321 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase Vapar_6323 PF02954 Bacterial regulatory protein, Fis family Vapar_6323 PF00158 Sigma-54 interaction domain Vapar_6324 PF00175 Oxidoreductase NAD-binding domain Vapar_6324 PF00042 Globin Vapar_6324 PF00970 Oxidoreductase FAD-binding domain Vapar_6327 PF13091 PLD-like domain Vapar_6328 PF00171 Aldehyde dehydrogenase family Vapar_6330 PF00571 CBS domain Vapar_6331 PF01965 DJ-1/PfpI family Vapar_6335 PF00654 Voltage gated chloride channel Vapar_6337 PF12833 Helix-turn-helix domain Vapar_6337 PF12852 Cupin Vapar_6344 PF03466 LysR substrate binding domain Vapar_6344 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_6345 PF03401 Tripartite tricarboxylate transporter family receptor Vapar_6346 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain Vapar_6346 PF02129 X-Pro dipeptidyl-peptidase (S15 family) Vapar_6347 PF12833 Helix-turn-helix domain Vapar_6349 PF03783 Curli production assembly/transport component CsgG Vapar_6351 PF13332 Hemagglutinin repeat Vapar_6351 PF13018 Extended Signal Peptide of Type V secretion system Vapar_6351 PF05860 haemagglutination activity domain Vapar_6351 PF04829 Pre-toxin domain with VENN motif Vapar_6356 PF08479 POTRA domain, ShlB-type Vapar_6356 PF17287 POTRA domain Vapar_6356 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB Vapar_6359 PF03737 Aldolase/RraA Vapar_6361 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vapar_6361 PF03466 LysR substrate binding domain Vapar_6362 PF00364 Biotin-requiring enzyme Vapar_6363 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Vapar_6363 PF02785 Biotin carboxylase C-terminal domain Vapar_6363 PF00289 Biotin carboxylase, N-terminal domain Vapar_6364 PF02682 Carboxyltransferase domain, subdomain C and D Vapar_6365 PF02626 Carboxyltransferase domain, subdomain A and B Vapar_6367 PF03746 LamB/YcsF family Vapar_6368 PF00106 short chain dehydrogenase Vapar_6369 PF00528 Binding-protein-dependent transport system inner membrane component Vapar_6370 PF00528 Binding-protein-dependent transport system inner membrane component Vapar_6371 PF00005 ABC transporter Vapar_6377 PF07331 Tripartite tricarboxylate transporter TctB family Vapar_6378 PF01970 Tripartite tricarboxylate transporter TctA family Vapar_6379 PF03060 Nitronate monooxygenase Vapar_6380 PF08281 Sigma-70, region 4 Vapar_6380 PF04542 Sigma-70 region 2 Vapar_6382 PF00034 Cytochrome c