locus-tag class description JVX96_00005 PF06745 KaiC JVX96_00010 PF00497 Bacterial extracellular solute-binding proteins, family 3 JVX96_00010 PF00072 Response regulator receiver domain JVX96_00010 PF00989 PAS fold JVX96_00010 PF01627 Hpt domain JVX96_00010 PF00512 His Kinase A (phospho-acceptor) domain JVX96_00010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JVX96_00020 PF01970 Tripartite tricarboxylate transporter TctA family JVX96_00025 PF07331 Tripartite tricarboxylate transporter TctB family JVX96_00030 PF00512 His Kinase A (phospho-acceptor) domain JVX96_00030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JVX96_00030 PF00672 HAMP domain JVX96_00035 PF00072 Response regulator receiver domain JVX96_00035 PF00486 Transcriptional regulatory protein, C terminal JVX96_00050 PF13609 Gram-negative porin JVX96_00060 PF07244 Surface antigen variable number repeat JVX96_00060 PF01103 Surface antigen JVX96_00065 PF04444 Catechol dioxygenase N terminus JVX96_00065 PF00775 Dioxygenase JVX96_00075 PF00512 His Kinase A (phospho-acceptor) domain JVX96_00075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JVX96_00075 PF00672 HAMP domain JVX96_00080 PF00072 Response regulator receiver domain JVX96_00080 PF00486 Transcriptional regulatory protein, C terminal JVX96_00085 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JVX96_00085 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JVX96_00085 PF02770 Acyl-CoA dehydrogenase, middle domain JVX96_00095 PF12805 FUSC-like inner membrane protein yccS JVX96_00105 PF01027 Inhibitor of apoptosis-promoting Bax1 JVX96_00110 PF02082 Transcriptional regulator JVX96_00115 PF00529 HlyD membrane-fusion protein of T1SS JVX96_00115 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JVX96_00120 PF00873 AcrB/AcrD/AcrF family JVX96_00125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_00125 PF03466 LysR substrate binding domain JVX96_00140 PF00106 short chain dehydrogenase JVX96_00145 PF06719 AraC-type transcriptional regulator N-terminus JVX96_00145 PF12833 Helix-turn-helix domain JVX96_00170 PF00155 Aminotransferase class I and II JVX96_00170 PF00392 Bacterial regulatory proteins, gntR family JVX96_00175 PF17991 Thioredoxin like C-terminal domain JVX96_00175 PF02683 Cytochrome C biogenesis protein transmembrane region JVX96_00175 PF00578 AhpC/TSA family JVX96_00180 PF01641 SelR domain JVX96_00200 PF07715 TonB-dependent Receptor Plug Domain JVX96_00200 PF00593 TonB dependent receptor JVX96_00205 PF07690 Major Facilitator Superfamily JVX96_00210 PF11954 Domain of unknown function (DUF3471) JVX96_00210 PF00144 Beta-lactamase JVX96_00215 PF07364 Metallopeptidase family M81 JVX96_00215 PF07171 MlrC C-terminus JVX96_00220 PF14031 Putative serine dehydratase domain JVX96_00220 PF01168 Alanine racemase, N-terminal domain JVX96_00225 PF01618 MotA/TolQ/ExbB proton channel family JVX96_00230 PF02472 Biopolymer transport protein ExbD/TolR JVX96_00255 PF00512 His Kinase A (phospho-acceptor) domain JVX96_00255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JVX96_00265 PF01904 Protein of unknown function DUF72 JVX96_00315 PF04055 Radical SAM superfamily JVX96_00315 PF06969 HemN C-terminal domain JVX96_00320 PF01725 Ham1 family JVX96_00325 PF01138 3' exoribonuclease family, domain 1 JVX96_00325 PF03725 3' exoribonuclease family, domain 2 JVX96_00335 PF03793 PASTA domain JVX96_00335 PF00069 Protein kinase domain JVX96_00340 PF08340 Domain of unknown function (DUF1732) JVX96_00340 PF03755 YicC-like family, N-terminal region JVX96_00345 PF00625 Guanylate kinase JVX96_00350 PF01192 RNA polymerase Rpb6 JVX96_00355 PF13291 ACT domain JVX96_00355 PF02824 TGS domain JVX96_00355 PF04607 Region found in RelA / SpoT proteins JVX96_00360 PF03449 Transcription elongation factor, N-terminal JVX96_00360 PF01272 Transcription elongation factor, GreA/GreB, C-term JVX96_00375 PF03466 LysR substrate binding domain JVX96_00375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_00380 PF03328 HpcH/HpaI aldolase/citrate lyase family JVX96_00385 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_00390 PF02515 CoA-transferase family III JVX96_00395 PF04909 Amidohydrolase JVX96_00400 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_00405 PF00563 EAL domain JVX96_00405 PF03707 Bacterial signalling protein N terminal repeat JVX96_00405 PF00990 Diguanylate cyclase, GGDEF domain JVX96_00420 PF13356 Arm DNA-binding domain JVX96_00420 PF00589 Phage integrase family JVX96_00455 PF05598 Transposase domain (DUF772) JVX96_00455 PF01609 Transposase DDE domain JVX96_00465 PF13193 AMP-binding enzyme C-terminal domain JVX96_00465 PF00501 AMP-binding enzyme JVX96_00470 PF00596 Class II Aldolase and Adducin N-terminal domain JVX96_00475 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JVX96_00475 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JVX96_00485 PF01070 FMN-dependent dehydrogenase JVX96_00490 PF00596 Class II Aldolase and Adducin N-terminal domain JVX96_00495 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_00505 PF00005 ABC transporter JVX96_00510 PF12399 Branched-chain amino acid ATP-binding cassette transporter JVX96_00510 PF00005 ABC transporter JVX96_00520 PF02653 Branched-chain amino acid transport system / permease component JVX96_00530 PF13609 Gram-negative porin JVX96_00535 PF03466 LysR substrate binding domain JVX96_00535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_00540 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_00550 PF00465 Iron-containing alcohol dehydrogenase JVX96_00555 PF00378 Enoyl-CoA hydratase/isomerase JVX96_00560 PF02515 CoA-transferase family III JVX96_00565 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JVX96_00565 PF02770 Acyl-CoA dehydrogenase, middle domain JVX96_00565 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JVX96_00570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_00570 PF03466 LysR substrate binding domain JVX96_00575 PF00378 Enoyl-CoA hydratase/isomerase JVX96_00580 PF13607 Succinyl-CoA ligase like flavodoxin domain JVX96_00580 PF13380 CoA binding domain JVX96_00585 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JVX96_00585 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JVX96_00585 PF02770 Acyl-CoA dehydrogenase, middle domain JVX96_00590 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JVX96_00590 PF02770 Acyl-CoA dehydrogenase, middle domain JVX96_00590 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JVX96_00595 PF01609 Transposase DDE domain JVX96_00595 PF05598 Transposase domain (DUF772) JVX96_00610 PF01609 Transposase DDE domain JVX96_00610 PF05598 Transposase domain (DUF772) JVX96_00695 PF06480 FtsH Extracellular JVX96_00695 PF17862 AAA+ lid domain JVX96_00695 PF00004 ATPase family associated with various cellular activities (AAA) JVX96_00695 PF01434 Peptidase family M41 JVX96_00715 PF00580 UvrD/REP helicase N-terminal domain JVX96_00715 PF13361 UvrD-like helicase C-terminal domain JVX96_00730 PF14464 Prokaryotic homologs of the JAB domain JVX96_00785 PF01628 HrcA protein C terminal domain JVX96_00785 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding JVX96_00790 PF01513 ATP-NAD kinase JVX96_00795 PF02463 RecF/RecN/SMC N terminal domain JVX96_00800 PF03668 P-loop ATPase protein family JVX96_00805 PF00730 HhH-GPD superfamily base excision DNA repair protein JVX96_00805 PF14815 NUDIX domain JVX96_00805 PF00633 Helix-hairpin-helix motif JVX96_00810 PF00350 Dynamin family JVX96_00815 PF06827 Zinc finger found in FPG and IleRS JVX96_00815 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain JVX96_00815 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain JVX96_00830 PF08544 GHMP kinases C terminal JVX96_00830 PF00288 GHMP kinases N terminal domain JVX96_00840 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase JVX96_00840 PF14572 Phosphoribosyl synthetase-associated domain JVX96_00845 PF01386 Ribosomal L25p family JVX96_00845 PF14693 Ribosomal protein TL5, C-terminal domain JVX96_00850 PF01195 Peptidyl-tRNA hydrolase JVX96_00860 PF00037 4Fe-4S binding domain JVX96_00865 PF00528 Binding-protein-dependent transport system inner membrane component JVX96_00870 PF12911 N-terminal TM domain of oligopeptide transport permease C JVX96_00870 PF00528 Binding-protein-dependent transport system inner membrane component JVX96_00875 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JVX96_00875 PF00005 ABC transporter JVX96_00880 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JVX96_00880 PF00005 ABC transporter JVX96_00885 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JVX96_00890 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JVX96_00895 PF01425 Amidase JVX96_00910 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JVX96_00925 PF03466 LysR substrate binding domain JVX96_00925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_00940 PF00300 Histidine phosphatase superfamily (branch 1) JVX96_00950 PF12697 Alpha/beta hydrolase family JVX96_00955 PF03746 LamB/YcsF family JVX96_00960 PF02626 Carboxyltransferase domain, subdomain A and B JVX96_00965 PF02682 Carboxyltransferase domain, subdomain C and D JVX96_00970 PF01467 Cytidylyltransferase-like JVX96_00980 PF01810 LysE type translocator JVX96_00985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_00985 PF03466 LysR substrate binding domain JVX96_00990 PF05193 Peptidase M16 inactive domain JVX96_00995 PF05193 Peptidase M16 inactive domain JVX96_00995 PF00675 Insulinase (Peptidase family M16) JVX96_01000 PF00448 SRP54-type protein, GTPase domain JVX96_01000 PF02881 SRP54-type protein, helical bundle domain JVX96_01010 PF00072 Response regulator receiver domain JVX96_01010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JVX96_01010 PF00512 His Kinase A (phospho-acceptor) domain JVX96_01010 PF01627 Hpt domain JVX96_01010 PF00672 HAMP domain JVX96_01015 PF00196 Bacterial regulatory proteins, luxR family JVX96_01015 PF00072 Response regulator receiver domain JVX96_01025 PF00140 Sigma-70 factor, region 1.2 JVX96_01025 PF04542 Sigma-70 region 2 JVX96_01025 PF04545 Sigma-70, region 4 JVX96_01030 PF08713 DNA alkylation repair enzyme JVX96_01035 PF02630 SCO1/SenC JVX96_01040 PF01040 UbiA prenyltransferase family JVX96_01065 PF00510 Cytochrome c oxidase subunit III JVX96_01075 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 JVX96_01080 PF00115 Cytochrome C and Quinol oxidase polypeptide I JVX96_01085 PF02790 Cytochrome C oxidase subunit II, transmembrane domain JVX96_01085 PF00116 Cytochrome C oxidase subunit II, periplasmic domain JVX96_01095 PF08241 Methyltransferase domain JVX96_01105 PF00588 SpoU rRNA Methylase family JVX96_01115 PF01575 MaoC like domain JVX96_01125 PF02525 Flavodoxin-like fold JVX96_01130 PF00999 Sodium/hydrogen exchanger family JVX96_01130 PF02254 TrkA-N domain JVX96_01140 PF00378 Enoyl-CoA hydratase/isomerase JVX96_01145 PF07993 Male sterility protein JVX96_01145 PF00501 AMP-binding enzyme JVX96_01145 PF00550 Phosphopantetheine attachment site JVX96_01150 PF00106 short chain dehydrogenase JVX96_01155 PF13458 Periplasmic binding protein JVX96_01165 PF12399 Branched-chain amino acid ATP-binding cassette transporter JVX96_01165 PF00005 ABC transporter JVX96_01170 PF00005 ABC transporter JVX96_01175 PF07519 Tannase and feruloyl esterase JVX96_01180 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JVX96_01180 PF02770 Acyl-CoA dehydrogenase, middle domain JVX96_01180 PF12806 Acetyl-CoA dehydrogenase C-terminal like JVX96_01180 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JVX96_01205 PF07690 Major Facilitator Superfamily JVX96_01210 PF07237 Protein of unknown function (DUF1428) JVX96_01220 PF00775 Dioxygenase JVX96_01220 PF04444 Catechol dioxygenase N terminus JVX96_01225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_01225 PF03466 LysR substrate binding domain JVX96_01240 PF00211 Adenylate and Guanylate cyclase catalytic domain JVX96_01240 PF02743 Cache domain JVX96_01240 PF00672 HAMP domain JVX96_01250 PF00465 Iron-containing alcohol dehydrogenase JVX96_01255 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain JVX96_01255 PF01137 RNA 3'-terminal phosphate cyclase JVX96_01260 PF10127 RNA repair pathway DNA polymerase beta family JVX96_01265 PF00753 Metallo-beta-lactamase superfamily JVX96_01275 PF01139 tRNA-splicing ligase RtcB JVX96_01290 PF00158 Sigma-54 interaction domain JVX96_01290 PF06956 Regulator of RNA terminal phosphate cyclase JVX96_01315 PF12146 Serine aminopeptidase, S33 JVX96_01320 PF02423 Ornithine cyclodeaminase/mu-crystallin family JVX96_01350 PF00108 Thiolase, N-terminal domain JVX96_01350 PF02803 Thiolase, C-terminal domain JVX96_01355 PF01144 Coenzyme A transferase JVX96_01360 PF01144 Coenzyme A transferase JVX96_01365 PF01614 Bacterial transcriptional regulator JVX96_01365 PF09339 IclR helix-turn-helix domain JVX96_01370 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_01390 PF00005 ABC transporter JVX96_01395 PF00005 ABC transporter JVX96_01405 PF00171 Aldehyde dehydrogenase family JVX96_01455 PF00263 Bacterial type II and III secretion system protein JVX96_01455 PF04972 BON domain JVX96_01455 PF13629 Pilus formation protein N terminal region JVX96_01465 PF00437 Type II/IV secretion system protein JVX96_01505 PF00072 Response regulator receiver domain JVX96_01505 PF00158 Sigma-54 interaction domain JVX96_01505 PF02954 Bacterial regulatory protein, Fis family JVX96_01515 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JVX96_01515 PF00529 HlyD membrane-fusion protein of T1SS JVX96_01520 PF00664 ABC transporter transmembrane region JVX96_01520 PF00005 ABC transporter JVX96_01520 PF03412 Peptidase C39 family JVX96_01525 PF08245 Mur ligase middle domain JVX96_01525 PF01225 Mur ligase family, catalytic domain JVX96_01525 PF02875 Mur ligase family, glutamate ligase domain JVX96_01530 PF00691 OmpA family JVX96_01545 PF03466 LysR substrate binding domain JVX96_01545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_01550 PF00775 Dioxygenase JVX96_01550 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal JVX96_01560 PF00034 Cytochrome c JVX96_01565 PF17862 AAA+ lid domain JVX96_01565 PF01434 Peptidase family M41 JVX96_01565 PF00004 ATPase family associated with various cellular activities (AAA) JVX96_01590 PF04357 TamB, inner membrane protein subunit of TAM complex JVX96_01615 PF02203 Tar ligand binding domain homologue JVX96_01615 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JVX96_01615 PF00672 HAMP domain JVX96_01635 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JVX96_01640 PF00892 EamA-like transporter family JVX96_01650 PF00005 ABC transporter JVX96_01655 PF12399 Branched-chain amino acid ATP-binding cassette transporter JVX96_01655 PF00005 ABC transporter JVX96_01665 PF13458 Periplasmic binding protein JVX96_01675 PF00890 FAD binding domain JVX96_01685 PF12833 Helix-turn-helix domain JVX96_01685 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term JVX96_01690 PF01553 Acyltransferase JVX96_01695 PF01979 Amidohydrolase family JVX96_01700 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JVX96_01700 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JVX96_01705 PF00156 Phosphoribosyl transferase domain JVX96_01710 PF03652 Holliday junction resolvase JVX96_01715 PF02622 Uncharacterized ACR, COG1678 JVX96_01720 PF00875 DNA photolyase JVX96_01720 PF03441 FAD binding domain of DNA photolyase JVX96_01725 PF00072 Response regulator receiver domain JVX96_01725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JVX96_01725 PF01584 CheW-like domain JVX96_01725 PF02895 Signal transducing histidine kinase, homodimeric domain JVX96_01725 PF01627 Hpt domain JVX96_01730 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JVX96_01730 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term JVX96_01740 PF00072 Response regulator receiver domain JVX96_01745 PF00072 Response regulator receiver domain JVX96_01750 PF00301 Rubredoxin JVX96_01760 PF00202 Aminotransferase class-III JVX96_01770 PF02142 MGS-like domain JVX96_01770 PF01808 AICARFT/IMPCHase bienzyme JVX96_01775 PF02954 Bacterial regulatory protein, Fis family JVX96_01780 PF01207 Dihydrouridine synthase (Dus) JVX96_01785 PF09335 SNARE associated Golgi protein JVX96_01805 PF06071 Protein of unknown function (DUF933) JVX96_01805 PF01926 50S ribosome-binding GTPase JVX96_01810 PF13407 Periplasmic binding protein domain JVX96_01815 PF00005 ABC transporter JVX96_01820 PF02653 Branched-chain amino acid transport system / permease component JVX96_01825 PF00356 Bacterial regulatory proteins, lacI family JVX96_01830 PF00294 pfkB family carbohydrate kinase JVX96_01835 PF05025 RbsD / FucU transport protein family JVX96_01845 PF01494 FAD binding domain JVX96_01850 PF10411 Disulfide bond isomerase protein N-terminus JVX96_01850 PF13098 Thioredoxin-like domain JVX96_01865 PF00893 Small Multidrug Resistance protein JVX96_01870 PF00378 Enoyl-CoA hydratase/isomerase JVX96_01895 PF02630 SCO1/SenC JVX96_01910 PF13193 AMP-binding enzyme C-terminal domain JVX96_01910 PF00501 AMP-binding enzyme JVX96_01920 PF00149 Calcineurin-like phosphoesterase JVX96_01950 PF00072 Response regulator receiver domain JVX96_01950 PF00990 Diguanylate cyclase, GGDEF domain JVX96_01955 PF02803 Thiolase, C-terminal domain JVX96_01955 PF00108 Thiolase, N-terminal domain JVX96_01960 PF00106 short chain dehydrogenase JVX96_01965 PF17874 MalT-like TPR region JVX96_01965 PF00196 Bacterial regulatory proteins, luxR family JVX96_01985 PF02770 Acyl-CoA dehydrogenase, middle domain JVX96_01985 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JVX96_01985 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JVX96_01990 PF13193 AMP-binding enzyme C-terminal domain JVX96_01990 PF00501 AMP-binding enzyme JVX96_01995 PF02515 CoA-transferase family III JVX96_02000 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JVX96_02000 PF02770 Acyl-CoA dehydrogenase, middle domain JVX96_02000 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JVX96_02005 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JVX96_02005 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JVX96_02005 PF02770 Acyl-CoA dehydrogenase, middle domain JVX96_02015 PF04116 Fatty acid hydroxylase superfamily JVX96_02025 PF17864 RuvB AAA lid domain JVX96_02025 PF05496 Holliday junction DNA helicase RuvB P-loop domain JVX96_02025 PF05491 RuvB C-terminal winged helix domain JVX96_02030 PF01066 CDP-alcohol phosphatidyltransferase JVX96_02035 PF12147 Putative methyltransferase JVX96_02035 PF12146 Serine aminopeptidase, S33 JVX96_02040 PF00782 Dual specificity phosphatase, catalytic domain JVX96_02070 PF07499 RuvA, C-terminal domain JVX96_02070 PF01330 RuvA N terminal domain JVX96_02075 PF02562 PhoH-like protein JVX96_02080 PF02130 Uncharacterized protein family UPF0054 JVX96_02085 PF02580 D-Tyr-tRNA(Tyr) deacylase JVX96_02090 PF16916 Dimerisation domain of Zinc Transporter JVX96_02090 PF01545 Cation efflux family JVX96_02105 PF01479 S4 domain JVX96_02105 PF00579 tRNA synthetases class I (W and Y) JVX96_02115 PF03702 Anhydro-N-acetylmuramic acid kinase JVX96_02120 PF07690 Major Facilitator Superfamily JVX96_02125 PF01521 Iron-sulphur cluster biosynthesis JVX96_02130 PF00380 Ribosomal protein S9/S16 JVX96_02135 PF00572 Ribosomal protein L13 JVX96_02140 PF13180 PDZ domain JVX96_02150 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ JVX96_02155 PF03330 Lytic transglycolase JVX96_02160 PF02219 Methylenetetrahydrofolate reductase JVX96_02165 PF01728 FtsJ-like methyltransferase JVX96_02165 PF01479 S4 domain JVX96_02170 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain JVX96_02170 PF05221 S-adenosyl-L-homocysteine hydrolase JVX96_02190 PF16658 Class II release factor RF3, C-terminal domain JVX96_02190 PF03144 Elongation factor Tu domain 2 JVX96_02190 PF00009 Elongation factor Tu GTP binding domain JVX96_02205 PF00005 ABC transporter JVX96_02215 PF07690 Major Facilitator Superfamily JVX96_02225 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_02230 PF00850 Histone deacetylase domain JVX96_02235 PF02423 Ornithine cyclodeaminase/mu-crystallin family JVX96_02240 PF01546 Peptidase family M20/M25/M40 JVX96_02240 PF07687 Peptidase dimerisation domain JVX96_02245 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_02250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_02250 PF03466 LysR substrate binding domain JVX96_02255 PF17760 UvrA interaction domain JVX96_02255 PF17755 UvrA DNA-binding domain JVX96_02255 PF00005 ABC transporter JVX96_02270 PF08946 Osmosensory transporter coiled coil JVX96_02270 PF00083 Sugar (and other) transporter JVX96_02290 PF01810 LysE type translocator JVX96_02295 PF00682 HMGL-like JVX96_02300 PF02770 Acyl-CoA dehydrogenase, middle domain JVX96_02300 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JVX96_02300 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JVX96_02305 PF02515 CoA-transferase family III JVX96_02310 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_02320 PF01614 Bacterial transcriptional regulator JVX96_02320 PF09339 IclR helix-turn-helix domain JVX96_02325 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JVX96_02335 PF14834 Glutathione S-transferase, C-terminal domain JVX96_02335 PF02798 Glutathione S-transferase, N-terminal domain JVX96_02345 PF00364 Biotin-requiring enzyme JVX96_02345 PF00289 Biotin carboxylase, N-terminal domain JVX96_02345 PF02785 Biotin carboxylase C-terminal domain JVX96_02345 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JVX96_02360 PF00378 Enoyl-CoA hydratase/isomerase JVX96_02370 PF01039 Carboxyl transferase domain JVX96_02375 PF00501 AMP-binding enzyme JVX96_02375 PF13193 AMP-binding enzyme C-terminal domain JVX96_02380 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JVX96_02380 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JVX96_02380 PF02770 Acyl-CoA dehydrogenase, middle domain JVX96_02395 PF13419 Haloacid dehalogenase-like hydrolase JVX96_02400 PF13667 ThiC-associated domain JVX96_02400 PF01964 Radical SAM ThiC family JVX96_02410 PF00196 Bacterial regulatory proteins, luxR family JVX96_02415 PF01425 Amidase JVX96_02420 PF00149 Calcineurin-like phosphoesterase JVX96_02425 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JVX96_02425 PF02770 Acyl-CoA dehydrogenase, middle domain JVX96_02425 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JVX96_02430 PF01546 Peptidase family M20/M25/M40 JVX96_02430 PF07687 Peptidase dimerisation domain JVX96_02435 PF02803 Thiolase, C-terminal domain JVX96_02435 PF00108 Thiolase, N-terminal domain JVX96_02440 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) JVX96_02445 PF00484 Carbonic anhydrase JVX96_02450 PF13411 MerR HTH family regulatory protein JVX96_02465 PF00849 RNA pseudouridylate synthase JVX96_02500 PF02092 Glycyl-tRNA synthetase beta subunit JVX96_02500 PF05746 DALR anticodon binding domain JVX96_02505 PF02091 Glycyl-tRNA synthetase alpha subunit JVX96_02510 PF00781 Diacylglycerol kinase catalytic domain JVX96_02520 PF01569 PAP2 superfamily JVX96_02525 PF00710 Asparaginase, N-terminal JVX96_02525 PF17763 Glutaminase/Asparaginase C-terminal domain JVX96_02565 PF01979 Amidohydrolase family JVX96_02570 PF02633 Creatinine amidohydrolase JVX96_02580 PF00005 ABC transporter JVX96_02585 PF00528 Binding-protein-dependent transport system inner membrane component JVX96_02595 PF00795 Carbon-nitrogen hydrolase JVX96_02600 PF03471 Transporter associated domain JVX96_02600 PF00571 CBS domain JVX96_02610 PF01037 Lrp/AsnC ligand binding domain JVX96_02615 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JVX96_02620 PF00497 Bacterial extracellular solute-binding proteins, family 3 JVX96_02625 PF00351 Biopterin-dependent aromatic amino acid hydroxylase JVX96_02630 PF00501 AMP-binding enzyme JVX96_02630 PF13193 AMP-binding enzyme C-terminal domain JVX96_02665 PF00005 ABC transporter JVX96_02665 PF12848 ABC transporter JVX96_02665 PF16326 ABC transporter C-terminal domain JVX96_02670 PF13091 PLD-like domain JVX96_02700 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_02710 PF01494 FAD binding domain JVX96_02750 PF03783 Curli production assembly/transport component CsgG JVX96_02760 PF00202 Aminotransferase class-III JVX96_02765 PF00551 Formyl transferase JVX96_02780 PF02785 Biotin carboxylase C-terminal domain JVX96_02780 PF00289 Biotin carboxylase, N-terminal domain JVX96_02780 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JVX96_02785 PF00501 AMP-binding enzyme JVX96_02785 PF13193 AMP-binding enzyme C-terminal domain JVX96_02790 PF00440 Bacterial regulatory proteins, tetR family JVX96_02795 PF13458 Periplasmic binding protein JVX96_02800 PF00175 Oxidoreductase NAD-binding domain JVX96_02800 PF00067 Cytochrome P450 JVX96_02800 PF00258 Flavodoxin JVX96_02800 PF00667 FAD binding domain JVX96_02820 PF00440 Bacterial regulatory proteins, tetR family JVX96_02835 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain JVX96_02835 PF06974 Protein of unknown function (DUF1298) JVX96_02840 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain JVX96_02840 PF00326 Prolyl oligopeptidase family JVX96_02845 PF00491 Arginase family JVX96_02860 PF17863 AAA lid domain JVX96_02860 PF07726 ATPase family associated with various cellular activities (AAA) JVX96_02900 PF01047 MarR family JVX96_02920 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain JVX96_02920 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase JVX96_02930 PF01037 Lrp/AsnC ligand binding domain JVX96_02935 PF01168 Alanine racemase, N-terminal domain JVX96_02940 PF00437 Type II/IV secretion system protein JVX96_02945 PF00437 Type II/IV secretion system protein JVX96_02955 PF13411 MerR HTH family regulatory protein JVX96_02960 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JVX96_02960 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JVX96_02970 PF13580 SIS domain JVX96_02975 PF02021 Uncharacterised protein family UPF0102 JVX96_02980 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JVX96_02985 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family JVX96_02990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_02990 PF03466 LysR substrate binding domain JVX96_03025 PF00440 Bacterial regulatory proteins, tetR family JVX96_03025 PF08361 MAATS-type transcriptional repressor, C-terminal region JVX96_03030 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JVX96_03030 PF00529 HlyD membrane-fusion protein of T1SS JVX96_03035 PF00873 AcrB/AcrD/AcrF family JVX96_03040 PF02321 Outer membrane efflux protein JVX96_03065 PF00296 Luciferase-like monooxygenase JVX96_03070 PF00857 Isochorismatase family JVX96_03075 PF01042 Endoribonuclease L-PSP JVX96_03080 PF00561 alpha/beta hydrolase fold JVX96_03085 PF00881 Nitroreductase family JVX96_03090 PF01613 Flavin reductase like domain JVX96_03095 PF08362 YcdC-like protein, C-terminal region JVX96_03095 PF00440 Bacterial regulatory proteins, tetR family JVX96_03100 PF03171 2OG-Fe(II) oxygenase superfamily JVX96_03100 PF14226 non-haem dioxygenase in morphine synthesis N-terminal JVX96_03110 PF02608 ABC transporter substrate-binding protein PnrA-like JVX96_03115 PF00005 ABC transporter JVX96_03125 PF02653 Branched-chain amino acid transport system / permease component JVX96_03135 PF03171 2OG-Fe(II) oxygenase superfamily JVX96_03135 PF14226 non-haem dioxygenase in morphine synthesis N-terminal JVX96_03140 PF13416 Bacterial extracellular solute-binding protein JVX96_03145 PF08402 TOBE domain JVX96_03145 PF00005 ABC transporter JVX96_03150 PF00528 Binding-protein-dependent transport system inner membrane component JVX96_03155 PF00528 Binding-protein-dependent transport system inner membrane component JVX96_03185 PF00085 Thioredoxin JVX96_03190 PF00271 Helicase conserved C-terminal domain JVX96_03190 PF00270 DEAD/DEAH box helicase JVX96_03190 PF08494 DEAD/H associated JVX96_03195 PF04679 ATP dependent DNA ligase C terminal region JVX96_03195 PF01068 ATP dependent DNA ligase domain JVX96_03195 PF04675 DNA ligase N terminus JVX96_03200 PF04679 ATP dependent DNA ligase C terminal region JVX96_03200 PF01068 ATP dependent DNA ligase domain JVX96_03200 PF04675 DNA ligase N terminus JVX96_03215 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JVX96_03215 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JVX96_03220 PF13407 Periplasmic binding protein domain JVX96_03225 PF02653 Branched-chain amino acid transport system / permease component JVX96_03230 PF00005 ABC transporter JVX96_03235 PF01047 MarR family JVX96_03235 PF00480 ROK family JVX96_03240 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain JVX96_03240 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain JVX96_03245 PF02874 ATP synthase alpha/beta family, beta-barrel domain JVX96_03245 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JVX96_03255 PF00231 ATP synthase JVX96_03260 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JVX96_03260 PF00306 ATP synthase alpha/beta chain, C terminal domain JVX96_03260 PF02874 ATP synthase alpha/beta family, beta-barrel domain JVX96_03265 PF00213 ATP synthase delta (OSCP) subunit JVX96_03270 PF00430 ATP synthase B/B' CF(0) JVX96_03275 PF00137 ATP synthase subunit C JVX96_03280 PF00119 ATP synthase A chain JVX96_03290 PF01063 Amino-transferase class IV JVX96_03295 PF04359 Protein of unknown function (DUF493) JVX96_03300 PF12706 Beta-lactamase superfamily domain JVX96_03305 PF03099 Biotin/lipoate A/B protein ligase family JVX96_03310 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family JVX96_03310 PF04055 Radical SAM superfamily JVX96_03365 PF13676 TIR domain JVX96_03380 PF13193 AMP-binding enzyme C-terminal domain JVX96_03380 PF00501 AMP-binding enzyme JVX96_03390 PF02954 Bacterial regulatory protein, Fis family JVX96_03390 PF00072 Response regulator receiver domain JVX96_03390 PF00158 Sigma-54 interaction domain JVX96_03400 PF07690 Major Facilitator Superfamily JVX96_03405 PF03600 Citrate transporter JVX96_03430 PF00107 Zinc-binding dehydrogenase JVX96_03430 PF16884 N-terminal domain of oxidoreductase JVX96_03435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JVX96_03435 PF00512 His Kinase A (phospho-acceptor) domain JVX96_03435 PF16750 Sensor domain of 2-component histidine kinase JVX96_03435 PF00672 HAMP domain JVX96_03440 PF00486 Transcriptional regulatory protein, C terminal JVX96_03440 PF00072 Response regulator receiver domain JVX96_03470 PF05524 PEP-utilising enzyme, N-terminal JVX96_03470 PF02896 PEP-utilising enzyme, TIM barrel domain JVX96_03470 PF00391 PEP-utilising enzyme, mobile domain JVX96_03475 PF00381 PTS HPr component phosphorylation site JVX96_03490 PF08534 Redoxin JVX96_03495 PF01322 Cytochrome C' JVX96_03510 PF08534 Redoxin JVX96_03515 PF00366 Ribosomal protein S17 JVX96_03520 PF00831 Ribosomal L29 protein JVX96_03525 PF00252 Ribosomal protein L16p/L10e JVX96_03530 PF07650 KH domain JVX96_03530 PF00189 Ribosomal protein S3, C-terminal domain JVX96_03535 PF00237 Ribosomal protein L22p/L17e JVX96_03540 PF00203 Ribosomal protein S19 JVX96_03545 PF00181 Ribosomal Proteins L2, RNA binding domain JVX96_03545 PF03947 Ribosomal Proteins L2, C-terminal domain JVX96_03550 PF00276 Ribosomal protein L23 JVX96_03555 PF00573 Ribosomal protein L4/L1 family JVX96_03560 PF00297 Ribosomal protein L3 JVX96_03575 PF00338 Ribosomal protein S10p/S20e JVX96_03580 PF00009 Elongation factor Tu GTP binding domain JVX96_03580 PF03144 Elongation factor Tu domain 2 JVX96_03580 PF03143 Elongation factor Tu C-terminal domain JVX96_03585 PF14492 Elongation Factor G, domain II JVX96_03585 PF03764 Elongation factor G, domain IV JVX96_03585 PF00009 Elongation factor Tu GTP binding domain JVX96_03585 PF00679 Elongation factor G C-terminus JVX96_03585 PF03144 Elongation factor Tu domain 2 JVX96_03590 PF00177 Ribosomal protein S7p/S5e JVX96_03595 PF00164 Ribosomal protein S12/S23 JVX96_03600 PF07943 Penicillin-binding protein 5, C-terminal domain JVX96_03600 PF00768 D-alanyl-D-alanine carboxypeptidase JVX96_03605 PF02129 X-Pro dipeptidyl-peptidase (S15 family) JVX96_03620 PF03653 Uncharacterised protein family (UPF0093) JVX96_03625 PF00490 Delta-aminolevulinic acid dehydratase JVX96_03630 PF01544 CorA-like Mg2+ transporter protein JVX96_03645 PF03466 LysR substrate binding domain JVX96_03645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_03650 PF01738 Dienelactone hydrolase family JVX96_03655 PF01323 DSBA-like thioredoxin domain JVX96_03665 PF01914 MarC family integral membrane protein JVX96_03680 PF00501 AMP-binding enzyme JVX96_03685 PF00005 ABC transporter JVX96_03690 PF12399 Branched-chain amino acid ATP-binding cassette transporter JVX96_03690 PF00005 ABC transporter JVX96_03700 PF02653 Branched-chain amino acid transport system / permease component JVX96_03710 PF07859 alpha/beta hydrolase fold JVX96_03715 PF02222 ATP-grasp domain JVX96_03720 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JVX96_03720 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JVX96_03730 PF00144 Beta-lactamase JVX96_03735 PF03309 Type III pantothenate kinase JVX96_03740 PF00356 Bacterial regulatory proteins, lacI family JVX96_03750 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JVX96_03750 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JVX96_03760 PF03480 Bacterial extracellular solute-binding protein, family 7 JVX96_03770 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component JVX96_03770 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component JVX96_03795 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JVX96_03795 PF07992 Pyridine nucleotide-disulphide oxidoreductase JVX96_03800 PF02558 Ketopantoate reductase PanE/ApbA JVX96_03800 PF08546 Ketopantoate reductase PanE/ApbA C terminal JVX96_03810 PF00528 Binding-protein-dependent transport system inner membrane component JVX96_03815 PF08402 TOBE domain JVX96_03815 PF00005 ABC transporter JVX96_03820 PF13416 Bacterial extracellular solute-binding protein JVX96_03835 PF01048 Phosphorylase superfamily JVX96_03835 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus JVX96_03840 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_03850 PF00067 Cytochrome P450 JVX96_03860 PF02798 Glutathione S-transferase, N-terminal domain JVX96_03865 PF03466 LysR substrate binding domain JVX96_03865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_03885 PF00005 ABC transporter JVX96_03890 PF01061 ABC-2 type transporter JVX96_03900 PF01047 MarR family JVX96_03905 PF02566 OsmC-like protein JVX96_03910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_03910 PF03466 LysR substrate binding domain JVX96_03915 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_03920 PF07969 Amidohydrolase family JVX96_03930 PF01636 Phosphotransferase enzyme family JVX96_03935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_03935 PF03466 LysR substrate binding domain JVX96_03940 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JVX96_03940 PF02770 Acyl-CoA dehydrogenase, middle domain JVX96_03940 PF18158 Adaptive response protein AidB N-terminal domain JVX96_03945 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_03950 PF02515 CoA-transferase family III JVX96_03955 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JVX96_03955 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JVX96_03955 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JVX96_03985 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_03990 PF05762 VWA domain containing CoxE-like protein JVX96_04005 PF00183 Hsp90 protein JVX96_04010 PF07728 AAA domain (dynein-related subfamily) JVX96_04030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JVX96_04030 PF00183 Hsp90 protein JVX96_04045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_04045 PF03466 LysR substrate binding domain JVX96_04050 PF08659 KR domain JVX96_04050 PF02801 Beta-ketoacyl synthase, C-terminal domain JVX96_04050 PF14765 Polyketide synthase dehydratase JVX96_04050 PF00698 Acyl transferase domain JVX96_04050 PF08240 Alcohol dehydrogenase GroES-like domain JVX96_04050 PF00109 Beta-ketoacyl synthase, N-terminal domain JVX96_04050 PF00107 Zinc-binding dehydrogenase JVX96_04050 PF00550 Phosphopantetheine attachment site JVX96_04050 PF16197 Ketoacyl-synthetase C-terminal extension JVX96_04060 PF08521 Two-component sensor kinase N-terminal JVX96_04060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JVX96_04060 PF00512 His Kinase A (phospho-acceptor) domain JVX96_04065 PF00072 Response regulator receiver domain JVX96_04065 PF00486 Transcriptional regulatory protein, C terminal JVX96_04075 PF00849 RNA pseudouridylate synthase JVX96_04075 PF01479 S4 domain JVX96_04080 PF00293 NUDIX domain JVX96_04080 PF01467 Cytidylyltransferase-like JVX96_04085 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family JVX96_04090 PF04101 Glycosyltransferase family 28 C-terminal domain JVX96_04090 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase JVX96_04110 PF00486 Transcriptional regulatory protein, C terminal JVX96_04110 PF00072 Response regulator receiver domain JVX96_04115 PF02702 Osmosensitive K+ channel His kinase sensor domain JVX96_04115 PF13493 Domain of unknown function (DUF4118) JVX96_04115 PF13492 GAF domain JVX96_04115 PF00512 His Kinase A (phospho-acceptor) domain JVX96_04115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JVX96_04125 PF02669 K+-transporting ATPase, c chain JVX96_04135 PF03814 Potassium-transporting ATPase A subunit JVX96_04145 PF13533 Biotin-lipoyl like JVX96_04150 PF00873 AcrB/AcrD/AcrF family JVX96_04155 PF02321 Outer membrane efflux protein JVX96_04165 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain JVX96_04165 PF02777 Iron/manganese superoxide dismutases, C-terminal domain JVX96_04170 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_04175 PF00753 Metallo-beta-lactamase superfamily JVX96_04185 PF00106 short chain dehydrogenase JVX96_04195 PF00027 Cyclic nucleotide-binding domain JVX96_04195 PF13545 Crp-like helix-turn-helix domain JVX96_04200 PF00501 AMP-binding enzyme JVX96_04205 PF00005 ABC transporter JVX96_04205 PF12399 Branched-chain amino acid ATP-binding cassette transporter JVX96_04225 PF00005 ABC transporter JVX96_04230 PF13193 AMP-binding enzyme C-terminal domain JVX96_04230 PF00501 AMP-binding enzyme JVX96_04240 PF00285 Citrate synthase, C-terminal domain JVX96_04245 PF00285 Citrate synthase, C-terminal domain JVX96_04250 PF01965 DJ-1/PfpI family JVX96_04255 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_04270 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JVX96_04270 PF13360 PQQ-like domain JVX96_04280 PF00480 ROK family JVX96_04280 PF01325 Iron dependent repressor, N-terminal DNA binding domain JVX96_04285 PF00005 ABC transporter JVX96_04290 PF02653 Branched-chain amino acid transport system / permease component JVX96_04295 PF13407 Periplasmic binding protein domain JVX96_04315 PF13091 PLD-like domain JVX96_04315 PF13396 Phospholipase_D-nuclease N-terminal JVX96_04320 PF00072 Response regulator receiver domain JVX96_04320 PF00196 Bacterial regulatory proteins, luxR family JVX96_04325 PF00557 Metallopeptidase family M24 JVX96_04335 PF00676 Dehydrogenase E1 component JVX96_04340 PF02779 Transketolase, pyrimidine binding domain JVX96_04340 PF02780 Transketolase, C-terminal domain JVX96_04355 PF03466 LysR substrate binding domain JVX96_04355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_04360 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_04375 PF01494 FAD binding domain JVX96_04385 PF00378 Enoyl-CoA hydratase/isomerase JVX96_04390 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JVX96_04390 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JVX96_04390 PF02770 Acyl-CoA dehydrogenase, middle domain JVX96_04395 PF00501 AMP-binding enzyme JVX96_04395 PF13193 AMP-binding enzyme C-terminal domain JVX96_04410 PF01196 Ribosomal protein L17 JVX96_04415 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain JVX96_04415 PF01000 RNA polymerase Rpb3/RpoA insert domain JVX96_04415 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain JVX96_04420 PF01479 S4 domain JVX96_04420 PF00163 Ribosomal protein S4/S9 N-terminal domain JVX96_04425 PF00411 Ribosomal protein S11 JVX96_04430 PF00416 Ribosomal protein S13/S18 JVX96_04435 PF00444 Ribosomal protein L36 JVX96_04440 PF00344 SecY translocase JVX96_04445 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A JVX96_04450 PF00327 Ribosomal protein L30p/L7e JVX96_04455 PF00333 Ribosomal protein S5, N-terminal domain JVX96_04455 PF03719 Ribosomal protein S5, C-terminal domain JVX96_04460 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast JVX96_04465 PF00347 Ribosomal protein L6 JVX96_04470 PF00410 Ribosomal protein S8 JVX96_04475 PF00253 Ribosomal protein S14p/S29e JVX96_04480 PF00673 ribosomal L5P family C-terminus JVX96_04480 PF00281 Ribosomal protein L5 JVX96_04485 PF00467 KOW motif JVX96_04485 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 JVX96_04490 PF00238 Ribosomal protein L14p/L23e JVX96_04500 PF14748 Pyrroline-5-carboxylate reductase dimerisation JVX96_04500 PF03807 NADP oxidoreductase coenzyme F420-dependent JVX96_04510 PF01040 UbiA prenyltransferase family JVX96_04515 PF00210 Ferritin-like domain JVX96_04520 PF03466 LysR substrate binding domain JVX96_04520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_04525 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JVX96_04525 PF00364 Biotin-requiring enzyme JVX96_04525 PF00289 Biotin carboxylase, N-terminal domain JVX96_04525 PF02785 Biotin carboxylase C-terminal domain JVX96_04530 PF02682 Carboxyltransferase domain, subdomain C and D JVX96_04535 PF03746 LamB/YcsF family JVX96_04540 PF01470 Pyroglutamyl peptidase JVX96_04560 PF01810 LysE type translocator JVX96_04565 PF00270 DEAD/DEAH box helicase JVX96_04565 PF00271 Helicase conserved C-terminal domain JVX96_04565 PF17191 RecG wedge domain JVX96_04570 PF01370 NAD dependent epimerase/dehydratase family JVX96_04570 PF08338 Domain of unknown function (DUF1731) JVX96_04580 PF02547 Queuosine biosynthesis protein JVX96_04585 PF01702 Queuine tRNA-ribosyltransferase JVX96_04640 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family JVX96_04655 PF00814 Glycoprotease family JVX96_04660 PF08220 DeoR-like helix-turn-helix domain JVX96_04660 PF00455 DeoR C terminal sensor domain JVX96_04665 PF00293 NUDIX domain JVX96_04670 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family JVX96_04680 PF01300 Telomere recombination JVX96_04680 PF03481 Putative GTP-binding controlling metal-binding JVX96_04685 PF02222 ATP-grasp domain JVX96_04685 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain JVX96_04690 PF00731 AIR carboxylase JVX96_04695 PF00085 Thioredoxin JVX96_04705 PF01259 SAICAR synthetase JVX96_04710 PF01116 Fructose-bisphosphate aldolase class-II JVX96_04720 PF01037 Lrp/AsnC ligand binding domain JVX96_04725 PF00291 Pyridoxal-phosphate dependent enzyme JVX96_04730 PF02887 Pyruvate kinase, alpha/beta domain JVX96_04730 PF00224 Pyruvate kinase, barrel domain JVX96_04735 PF00162 Phosphoglycerate kinase JVX96_04740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_04740 PF03466 LysR substrate binding domain JVX96_04755 PF01494 FAD binding domain JVX96_04770 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_04785 PF02911 Formyl transferase, C-terminal domain JVX96_04785 PF00551 Formyl transferase JVX96_04795 PF01327 Polypeptide deformylase JVX96_04805 PF17782 DprA winged helix domain JVX96_04805 PF02481 DNA recombination-mediator protein A JVX96_04810 PF04361 Protein of unknown function (DUF494) JVX96_04820 PF07549 SecD/SecF GG Motif JVX96_04820 PF02355 Protein export membrane protein JVX96_04825 PF02355 Protein export membrane protein JVX96_04825 PF13721 SecD export protein N-terminal TM region JVX96_04825 PF07549 SecD/SecF GG Motif JVX96_04830 PF02699 Preprotein translocase subunit JVX96_04840 PF01037 Lrp/AsnC ligand binding domain JVX96_04850 PF00497 Bacterial extracellular solute-binding proteins, family 3 JVX96_04855 PF00528 Binding-protein-dependent transport system inner membrane component JVX96_04860 PF05977 Transmembrane secretion effector JVX96_04865 PF02633 Creatinine amidohydrolase JVX96_04870 PF00005 ABC transporter JVX96_04875 PF00528 Binding-protein-dependent transport system inner membrane component JVX96_04895 PF00111 2Fe-2S iron-sulfur cluster binding domain JVX96_04895 PF00175 Oxidoreductase NAD-binding domain JVX96_04905 PF01042 Endoribonuclease L-PSP JVX96_04915 PF01261 Xylose isomerase-like TIM barrel JVX96_04920 PF00596 Class II Aldolase and Adducin N-terminal domain JVX96_04925 PF17042 Nucleotide-binding C-terminal domain JVX96_04925 PF07005 Sugar-binding N-terminal domain JVX96_04930 PF01370 NAD dependent epimerase/dehydratase family JVX96_04935 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JVX96_04935 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JVX96_04940 PF00392 Bacterial regulatory proteins, gntR family JVX96_04940 PF07729 FCD domain JVX96_04945 PF00456 Transketolase, thiamine diphosphate binding domain JVX96_04945 PF17831 Pyruvate dehydrogenase E1 component middle domain JVX96_04950 PF01037 Lrp/AsnC ligand binding domain JVX96_04980 PF00072 Response regulator receiver domain JVX96_04980 PF00196 Bacterial regulatory proteins, luxR family JVX96_04985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JVX96_04985 PF00989 PAS fold JVX96_04985 PF00512 His Kinase A (phospho-acceptor) domain JVX96_04990 PF00795 Carbon-nitrogen hydrolase JVX96_05000 PF08335 GlnD PII-uridylyltransferase JVX96_05000 PF03710 Glutamate-ammonia ligase adenylyltransferase JVX96_05005 PF05036 Sporulation related domain JVX96_05005 PF03330 Lytic transglycolase JVX96_05010 PF02627 Carboxymuconolactone decarboxylase family JVX96_05015 PF08281 Sigma-70, region 4 JVX96_05015 PF12680 SnoaL-like domain JVX96_05015 PF04542 Sigma-70 region 2 JVX96_05025 PF00255 Glutathione peroxidase JVX96_05030 PF01593 Flavin containing amine oxidoreductase JVX96_05050 PF00106 short chain dehydrogenase JVX96_05055 PF00043 Glutathione S-transferase, C-terminal domain JVX96_05055 PF13417 Glutathione S-transferase, N-terminal domain JVX96_05060 PF08328 Adenylosuccinate lyase C-terminal JVX96_05060 PF00206 Lyase JVX96_05065 PF07152 YaeQ protein JVX96_05080 PF03741 Integral membrane protein TerC family JVX96_05090 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV JVX96_05095 PF01435 Peptidase family M48 JVX96_05095 PF13181 Tetratricopeptide repeat JVX96_05100 PF01967 MoaC family JVX96_05105 PF07963 Prokaryotic N-terminal methylation motif JVX96_05105 PF08334 Type II secretion system (T2SS), protein G JVX96_05110 PF05567 Neisseria PilC beta-propeller domain JVX96_05120 PF07963 Prokaryotic N-terminal methylation motif JVX96_05130 PF07963 Prokaryotic N-terminal methylation motif JVX96_05130 PF00114 Pilin (bacterial filament) JVX96_05135 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor JVX96_05135 PF07963 Prokaryotic N-terminal methylation motif JVX96_05140 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor JVX96_05140 PF07963 Prokaryotic N-terminal methylation motif JVX96_05160 PF05567 Neisseria PilC beta-propeller domain JVX96_05165 PF00884 Sulfatase JVX96_05165 PF08019 Phosphoethanolamine transferase EptA/EptB JVX96_05170 PF00665 Integrase core domain JVX96_05175 PF01695 IstB-like ATP binding protein JVX96_05180 PF00114 Pilin (bacterial filament) JVX96_05180 PF07963 Prokaryotic N-terminal methylation motif JVX96_05185 PF07963 Prokaryotic N-terminal methylation motif JVX96_05185 PF00114 Pilin (bacterial filament) JVX96_05195 PF00211 Adenylate and Guanylate cyclase catalytic domain JVX96_05200 PF00498 FHA domain JVX96_05210 PF03741 Integral membrane protein TerC family JVX96_05215 PF00549 CoA-ligase JVX96_05215 PF02629 CoA binding domain JVX96_05220 PF08442 ATP-grasp domain JVX96_05220 PF00549 CoA-ligase JVX96_05225 PF01118 Semialdehyde dehydrogenase, NAD binding domain JVX96_05235 PF09339 IclR helix-turn-helix domain JVX96_05235 PF01614 Bacterial transcriptional regulator JVX96_05245 PF03737 Aldolase/RraA JVX96_05255 PF08666 SAF domain JVX96_05255 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus JVX96_05260 PF00528 Binding-protein-dependent transport system inner membrane component JVX96_05265 PF00528 Binding-protein-dependent transport system inner membrane component JVX96_05270 PF00005 ABC transporter JVX96_05275 PF00497 Bacterial extracellular solute-binding proteins, family 3 JVX96_05280 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JVX96_05280 PF13378 Enolase C-terminal domain-like JVX96_05290 PF02631 RecX family JVX96_05295 PF00154 recA bacterial DNA recombination protein JVX96_05305 PF00486 Transcriptional regulatory protein, C terminal JVX96_05305 PF00072 Response regulator receiver domain JVX96_05310 PF08521 Two-component sensor kinase N-terminal JVX96_05310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JVX96_05310 PF00512 His Kinase A (phospho-acceptor) domain JVX96_05320 PF02237 Biotin protein ligase C terminal domain JVX96_05320 PF08279 HTH domain JVX96_05320 PF03099 Biotin/lipoate A/B protein ligase family JVX96_05330 PF01131 DNA topoisomerase JVX96_05330 PF01751 Toprim domain JVX96_05335 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_05340 PF03466 LysR substrate binding domain JVX96_05340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_05345 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_05360 PF07722 Peptidase C26 JVX96_05375 PF00155 Aminotransferase class I and II JVX96_05375 PF00392 Bacterial regulatory proteins, gntR family JVX96_05380 PF07690 Major Facilitator Superfamily JVX96_05390 PF01176 Translation initiation factor 1A / IF-1 JVX96_05395 PF03880 DbpA RNA binding domain JVX96_05395 PF00270 DEAD/DEAH box helicase JVX96_05395 PF00271 Helicase conserved C-terminal domain JVX96_05400 PF01554 MatE JVX96_05415 PF03466 LysR substrate binding domain JVX96_05415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_05420 PF00892 EamA-like transporter family JVX96_05425 PF01361 Tautomerase enzyme JVX96_05430 PF00392 Bacterial regulatory proteins, gntR family JVX96_05430 PF07729 FCD domain JVX96_05435 PF17806 Sarcosine oxidase A3 domain JVX96_05435 PF07992 Pyridine nucleotide-disulphide oxidoreductase JVX96_05445 PF01266 FAD dependent oxidoreductase JVX96_05450 PF05544 Proline racemase JVX96_05455 PF13458 Periplasmic binding protein JVX96_05460 PF00701 Dihydrodipicolinate synthetase family JVX96_05475 PF13193 AMP-binding enzyme C-terminal domain JVX96_05475 PF00501 AMP-binding enzyme JVX96_05480 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_05485 PF13657 HipA N-terminal domain JVX96_05485 PF07804 HipA-like C-terminal domain JVX96_05495 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_05500 PF07687 Peptidase dimerisation domain JVX96_05500 PF01546 Peptidase family M20/M25/M40 JVX96_05505 PF05726 Pirin C-terminal cupin domain JVX96_05505 PF02678 Pirin JVX96_05515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_05515 PF03466 LysR substrate binding domain JVX96_05520 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JVX96_05540 PF05726 Pirin C-terminal cupin domain JVX96_05540 PF02678 Pirin JVX96_05550 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_05555 PF00180 Isocitrate/isopropylmalate dehydrogenase JVX96_05560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_05560 PF03466 LysR substrate binding domain JVX96_05565 PF01566 Natural resistance-associated macrophage protein JVX96_05570 PF03992 Antibiotic biosynthesis monooxygenase JVX96_05575 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JVX96_05575 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JVX96_05580 PF02779 Transketolase, pyrimidine binding domain JVX96_05580 PF02780 Transketolase, C-terminal domain JVX96_05580 PF00456 Transketolase, thiamine diphosphate binding domain JVX96_05585 PF02675 S-adenosylmethionine decarboxylase JVX96_05590 PF00483 Nucleotidyl transferase JVX96_05595 PF05195 Aminopeptidase P, N-terminal domain JVX96_05595 PF00557 Metallopeptidase family M24 JVX96_05620 PF00912 Transglycosylase JVX96_05620 PF06832 Penicillin-Binding Protein C-terminus Family JVX96_05620 PF00905 Penicillin binding protein transpeptidase domain JVX96_05625 PF00207 Alpha-2-macroglobulin family JVX96_05625 PF07703 Alpha-2-macroglobulin bait region domain JVX96_05625 PF11974 Bacterial alpha-2-macroglobulin MG3 domain JVX96_05625 PF17962 Bacterial macroglobulin domain 6 JVX96_05625 PF01835 MG2 domain JVX96_05625 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain JVX96_05625 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain JVX96_05670 PF03949 Malic enzyme, NAD binding domain JVX96_05670 PF01515 Phosphate acetyl/butaryl transferase JVX96_05670 PF00390 Malic enzyme, N-terminal domain JVX96_05675 PF00545 ribonuclease JVX96_05690 PF00398 Ribosomal RNA adenine dimethylase JVX96_05695 PF00639 PPIC-type PPIASE domain JVX96_05695 PF09312 SurA N-terminal domain JVX96_05700 PF04453 LPS transport system D JVX96_05705 PF01636 Phosphotransferase enzyme family JVX96_05710 PF04452 RNA methyltransferase JVX96_05725 PF13569 Domain of unknown function (DUF4132) JVX96_05730 PF12146 Serine aminopeptidase, S33 JVX96_05750 PF00027 Cyclic nucleotide-binding domain JVX96_05750 PF00520 Ion transport protein JVX96_05755 PF01205 Uncharacterized protein family UPF0029 JVX96_05755 PF09186 Domain of unknown function (DUF1949) JVX96_05760 PF00561 alpha/beta hydrolase fold JVX96_05760 PF07021 Methionine biosynthesis protein MetW JVX96_05770 PF01169 Uncharacterized protein family UPF0016 JVX96_05775 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) JVX96_05795 PF01380 SIS domain JVX96_05795 PF00571 CBS domain JVX96_05800 PF02254 TrkA-N domain JVX96_05800 PF02080 TrkA-C domain JVX96_05800 PF00999 Sodium/hydrogen exchanger family JVX96_05810 PF00027 Cyclic nucleotide-binding domain JVX96_05810 PF01740 STAS domain JVX96_05810 PF04960 Glutaminase JVX96_05815 PF12631 MnmE helical domain JVX96_05815 PF01926 50S ribosome-binding GTPase JVX96_05815 PF10396 GTP-binding protein TrmE N-terminus JVX96_05820 PF02096 60Kd inner membrane protein JVX96_05820 PF14849 YidC periplasmic domain JVX96_05825 PF01809 Putative membrane protein insertion efficiency factor JVX96_05830 PF00825 Ribonuclease P JVX96_05835 PF00468 Ribosomal protein L34 JVX96_05840 PF11638 DnaA N-terminal domain JVX96_05840 PF08299 Bacterial dnaA protein helix-turn-helix JVX96_05840 PF00308 Bacterial dnaA protein JVX96_05845 PF00712 DNA polymerase III beta subunit, N-terminal domain JVX96_05845 PF02768 DNA polymerase III beta subunit, C-terminal domain JVX96_05845 PF02767 DNA polymerase III beta subunit, central domain JVX96_05850 PF01751 Toprim domain JVX96_05850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JVX96_05850 PF18053 DNA gyrase B subunit insert domain JVX96_05850 PF00986 DNA gyrase B subunit, carboxyl terminus JVX96_05850 PF00204 DNA gyrase B JVX96_05875 PF00149 Calcineurin-like phosphoesterase JVX96_05885 PF09411 Lipid A 3-O-deacylase (PagL) JVX96_05890 PF03706 Lysylphosphatidylglycerol synthase TM region JVX96_05895 PF13091 PLD-like domain JVX96_05900 PF03372 Endonuclease/Exonuclease/phosphatase family JVX96_05920 PF05726 Pirin C-terminal cupin domain JVX96_05920 PF02678 Pirin JVX96_05925 PF00583 Acetyltransferase (GNAT) family JVX96_05930 PF00912 Transglycosylase JVX96_05950 PF06123 Inner membrane protein CreD JVX96_05955 PF00933 Glycosyl hydrolase family 3 N terminal domain JVX96_05960 PF00905 Penicillin binding protein transpeptidase domain JVX96_05960 PF17092 Penicillin-binding protein OB-like domain JVX96_05960 PF00912 Transglycosylase JVX96_05970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JVX96_05970 PF00512 His Kinase A (phospho-acceptor) domain JVX96_05970 PF00672 HAMP domain JVX96_05975 PF00072 Response regulator receiver domain JVX96_05975 PF00486 Transcriptional regulatory protein, C terminal JVX96_05985 PF00376 MerR family regulatory protein JVX96_05985 PF09278 MerR, DNA binding JVX96_05990 PF00403 Heavy-metal-associated domain JVX96_05995 PF00403 Heavy-metal-associated domain JVX96_06000 PF00583 Acetyltransferase (GNAT) family JVX96_06005 PF04116 Fatty acid hydroxylase superfamily JVX96_06010 PF02801 Beta-ketoacyl synthase, C-terminal domain JVX96_06010 PF00109 Beta-ketoacyl synthase, N-terminal domain JVX96_06015 PF00550 Phosphopantetheine attachment site JVX96_06025 PF00072 Response regulator receiver domain JVX96_06025 PF00486 Transcriptional regulatory protein, C terminal JVX96_06030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JVX96_06030 PF00512 His Kinase A (phospho-acceptor) domain JVX96_06035 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JVX96_06050 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JVX96_06060 PF00378 Enoyl-CoA hydratase/isomerase JVX96_06065 PF00043 Glutathione S-transferase, C-terminal domain JVX96_06065 PF02798 Glutathione S-transferase, N-terminal domain JVX96_06085 PF01134 Glucose inhibited division protein A JVX96_06085 PF13932 GidA associated domain JVX96_06090 PF02527 rRNA small subunit methyltransferase G JVX96_06095 PF01810 LysE type translocator JVX96_06100 PF13614 AAA domain JVX96_06110 PF17762 HTH domain found in ParB protein JVX96_06110 PF02195 ParB-like nuclease domain JVX96_06120 PF01565 FAD binding domain JVX96_06120 PF02913 FAD linked oxidases, C-terminal domain JVX96_06125 PF01923 Cobalamin adenosyltransferase JVX96_06145 PF13458 Periplasmic binding protein JVX96_06150 PF02653 Branched-chain amino acid transport system / permease component JVX96_06160 PF00005 ABC transporter JVX96_06160 PF12399 Branched-chain amino acid ATP-binding cassette transporter JVX96_06165 PF00005 ABC transporter JVX96_06185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_06185 PF03466 LysR substrate binding domain JVX96_06210 PF03776 Septum formation topological specificity factor MinE JVX96_06215 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain JVX96_06220 PF03775 Septum formation inhibitor MinC, C-terminal domain JVX96_06220 PF05209 Septum formation inhibitor MinC, N-terminal domain JVX96_06225 PF00860 Permease family JVX96_06230 PF03061 Thioesterase superfamily JVX96_06240 PF00378 Enoyl-CoA hydratase/isomerase JVX96_06250 PF00668 Condensation domain JVX96_06250 PF00550 Phosphopantetheine attachment site JVX96_06250 PF00501 AMP-binding enzyme JVX96_06250 PF13193 AMP-binding enzyme C-terminal domain JVX96_06250 PF00975 Thioesterase domain JVX96_06255 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JVX96_06255 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JVX96_06265 PF05853 beta-keto acid cleavage enzyme JVX96_06280 PF00743 Flavin-binding monooxygenase-like JVX96_06295 PF02954 Bacterial regulatory protein, Fis family JVX96_06295 PF00158 Sigma-54 interaction domain JVX96_06295 PF01590 GAF domain JVX96_06300 PF00005 ABC transporter JVX96_06305 PF00005 ABC transporter JVX96_06305 PF12399 Branched-chain amino acid ATP-binding cassette transporter JVX96_06315 PF02653 Branched-chain amino acid transport system / permease component JVX96_06330 PF13193 AMP-binding enzyme C-terminal domain JVX96_06330 PF00501 AMP-binding enzyme JVX96_06335 PF00171 Aldehyde dehydrogenase family JVX96_06345 PF01202 Shikimate kinase JVX96_06350 PF00378 Enoyl-CoA hydratase/isomerase JVX96_06360 PF00970 Oxidoreductase FAD-binding domain JVX96_06360 PF00037 4Fe-4S binding domain JVX96_06360 PF00175 Oxidoreductase NAD-binding domain JVX96_06380 PF07992 Pyridine nucleotide-disulphide oxidoreductase JVX96_06405 PF04199 Putative cyclase JVX96_06410 PF00528 Binding-protein-dependent transport system inner membrane component JVX96_06415 PF00528 Binding-protein-dependent transport system inner membrane component JVX96_06420 PF00005 ABC transporter JVX96_06435 PF13193 AMP-binding enzyme C-terminal domain JVX96_06435 PF00501 AMP-binding enzyme JVX96_06445 PF00672 HAMP domain JVX96_06445 PF00211 Adenylate and Guanylate cyclase catalytic domain JVX96_06445 PF02743 Cache domain JVX96_06450 PF09859 Oxygenase, catalysing oxidative methylation of damaged DNA JVX96_06465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_06465 PF03466 LysR substrate binding domain JVX96_06470 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JVX96_06470 PF02770 Acyl-CoA dehydrogenase, middle domain JVX96_06470 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JVX96_06475 PF02515 CoA-transferase family III JVX96_06485 PF03466 LysR substrate binding domain JVX96_06485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_06495 PF07687 Peptidase dimerisation domain JVX96_06495 PF01546 Peptidase family M20/M25/M40 JVX96_06500 PF03315 Serine dehydratase beta chain JVX96_06500 PF03313 Serine dehydratase alpha chain JVX96_06510 PF03167 Uracil DNA glycosylase superfamily JVX96_06515 PF01979 Amidohydrolase family JVX96_06520 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_06535 PF05853 beta-keto acid cleavage enzyme JVX96_06545 PF04444 Catechol dioxygenase N terminus JVX96_06545 PF00775 Dioxygenase JVX96_06550 PF00356 Bacterial regulatory proteins, lacI family JVX96_06570 PF03466 LysR substrate binding domain JVX96_06570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_06585 PF00092 von Willebrand factor type A domain JVX96_06590 PF08406 CbbQ/NirQ/NorQ C-terminal JVX96_06590 PF07728 AAA domain (dynein-related subfamily) JVX96_06595 PF00795 Carbon-nitrogen hydrolase JVX96_06600 PF00005 ABC transporter JVX96_06605 PF00005 ABC transporter JVX96_06610 PF02653 Branched-chain amino acid transport system / permease component JVX96_06615 PF02653 Branched-chain amino acid transport system / permease component JVX96_06620 PF13458 Periplasmic binding protein JVX96_06640 PF04960 Glutaminase JVX96_06650 PF03466 LysR substrate binding domain JVX96_06650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_06665 PF00005 ABC transporter JVX96_06670 PF00528 Binding-protein-dependent transport system inner membrane component JVX96_06680 PF01613 Flavin reductase like domain JVX96_06685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_06685 PF03466 LysR substrate binding domain JVX96_06690 PF14864 Alkyl sulfatase C-terminal JVX96_06690 PF14863 Alkyl sulfatase dimerisation JVX96_06690 PF00753 Metallo-beta-lactamase superfamily JVX96_06695 PF07670 Nucleoside recognition JVX96_06700 PF13091 PLD-like domain JVX96_06710 PF00005 ABC transporter JVX96_06715 PF00005 ABC transporter JVX96_06715 PF12399 Branched-chain amino acid ATP-binding cassette transporter JVX96_06730 PF13458 Periplasmic binding protein JVX96_06735 PF00111 2Fe-2S iron-sulfur cluster binding domain JVX96_06740 PF00120 Glutamine synthetase, catalytic domain JVX96_06745 PF00355 Rieske [2Fe-2S] domain JVX96_06755 PF00440 Bacterial regulatory proteins, tetR family JVX96_06760 PF01425 Amidase JVX96_06775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_06775 PF03466 LysR substrate binding domain JVX96_06810 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain JVX96_06810 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain JVX96_06820 PF00291 Pyridoxal-phosphate dependent enzyme JVX96_06820 PF13291 ACT domain JVX96_06825 PF00004 ATPase family associated with various cellular activities (AAA) JVX96_06825 PF17862 AAA+ lid domain JVX96_06825 PF01434 Peptidase family M41 JVX96_06835 PF01156 Inosine-uridine preferring nucleoside hydrolase JVX96_06840 PF04909 Amidohydrolase JVX96_06845 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_06850 PF03466 LysR substrate binding domain JVX96_06850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_06855 PF00271 Helicase conserved C-terminal domain JVX96_06855 PF16124 RecQ zinc-binding JVX96_06855 PF09382 RQC domain JVX96_06855 PF00270 DEAD/DEAH box helicase JVX96_06855 PF00570 HRDC domain JVX96_06865 PF00528 Binding-protein-dependent transport system inner membrane component JVX96_06870 PF00005 ABC transporter JVX96_06875 PF00392 Bacterial regulatory proteins, gntR family JVX96_06875 PF07702 UTRA domain JVX96_06880 PF00221 Aromatic amino acid lyase JVX96_06885 PF17391 Urocanase N-terminal domain JVX96_06885 PF01175 Urocanase Rossmann-like domain JVX96_06885 PF17392 Urocanase C-terminal domain JVX96_06895 PF00497 Bacterial extracellular solute-binding proteins, family 3 JVX96_06900 PF00528 Binding-protein-dependent transport system inner membrane component JVX96_06905 PF05962 HutD JVX96_06910 PF01979 Amidohydrolase family JVX96_06915 PF01979 Amidohydrolase family JVX96_06925 PF02607 B12 binding domain JVX96_06925 PF00809 Pterin binding enzyme JVX96_06925 PF02310 B12 binding domain JVX96_06925 PF02965 Vitamin B12 dependent methionine synthase, activation domain JVX96_06925 PF02574 Homocysteine S-methyltransferase JVX96_06935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_06935 PF03466 LysR substrate binding domain JVX96_06945 PF03280 Proteobacterial lipase chaperone protein JVX96_06950 PF00561 alpha/beta hydrolase fold JVX96_06955 PF02965 Vitamin B12 dependent methionine synthase, activation domain JVX96_06955 PF02310 B12 binding domain JVX96_06955 PF00809 Pterin binding enzyme JVX96_06955 PF02574 Homocysteine S-methyltransferase JVX96_06955 PF02607 B12 binding domain JVX96_06975 PF01979 Amidohydrolase family JVX96_06980 PF17938 Tetracyclin repressor-like, C-terminal domain JVX96_06980 PF00440 Bacterial regulatory proteins, tetR family JVX96_06985 PF00175 Oxidoreductase NAD-binding domain JVX96_06985 PF00970 Oxidoreductase FAD-binding domain JVX96_06990 PF00037 4Fe-4S binding domain JVX96_07010 PF13458 Periplasmic binding protein JVX96_07020 PF00005 ABC transporter JVX96_07020 PF12399 Branched-chain amino acid ATP-binding cassette transporter JVX96_07025 PF00005 ABC transporter JVX96_07030 PF00857 Isochorismatase family JVX96_07040 PF01799 [2Fe-2S] binding domain JVX96_07040 PF00111 2Fe-2S iron-sulfur cluster binding domain JVX96_07045 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase JVX96_07045 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JVX96_07045 PF00034 Cytochrome c JVX96_07060 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 JVX96_07065 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath JVX96_07080 PF04965 Gene 25-like lysozyme JVX96_07085 PF05947 Type VI secretion system, TssF JVX96_07095 PF10431 C-terminal, D2-small domain, of ClpB protein JVX96_07095 PF17871 AAA lid domain JVX96_07095 PF07724 AAA domain (Cdc48 subfamily) JVX96_07095 PF00004 ATPase family associated with various cellular activities (AAA) JVX96_07100 PF04717 Type VI secretion system, phage-baseplate injector JVX96_07100 PF06715 Gp5 C-terminal repeat (3 copies) JVX96_07150 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE JVX96_07155 PF13677 Membrane MotB of proton-channel complex MotA/MotB JVX96_07155 PF00691 OmpA family JVX96_07160 PF14331 ImcF-related N-terminal domain JVX96_07160 PF06761 Intracellular multiplication and human macrophage-killing JVX96_07160 PF06744 Type VI secretion protein IcmF C-terminal JVX96_07170 PF00069 Protein kinase domain JVX96_07170 PF13191 AAA ATPase domain JVX96_07175 PF01078 Magnesium chelatase, subunit ChlI JVX96_07175 PF13335 Magnesium chelatase, subunit ChlI C-terminal JVX96_07185 PF00543 Nitrogen regulatory protein P-II JVX96_07190 PF00909 Ammonium Transporter Family JVX96_07195 PF08450 SMP-30/Gluconolactonase/LRE-like region JVX96_07200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_07200 PF03466 LysR substrate binding domain JVX96_07205 PF01565 FAD binding domain JVX96_07205 PF02913 FAD linked oxidases, C-terminal domain JVX96_07210 PF01565 FAD binding domain JVX96_07215 PF02754 Cysteine-rich domain JVX96_07215 PF13183 4Fe-4S dicluster domain JVX96_07225 PF00255 Glutathione peroxidase JVX96_07235 PF07690 Major Facilitator Superfamily JVX96_07240 PF01168 Alanine racemase, N-terminal domain JVX96_07240 PF00842 Alanine racemase, C-terminal domain JVX96_07250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_07250 PF03466 LysR substrate binding domain JVX96_07260 PF13411 MerR HTH family regulatory protein JVX96_07265 PF02558 Ketopantoate reductase PanE/ApbA JVX96_07265 PF08546 Ketopantoate reductase PanE/ApbA C terminal JVX96_07270 PF00596 Class II Aldolase and Adducin N-terminal domain JVX96_07275 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_07280 PF00920 Dehydratase family JVX96_07290 PF03328 HpcH/HpaI aldolase/citrate lyase family JVX96_07295 PF01557 Fumarylacetoacetate (FAA) hydrolase family JVX96_07315 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_07320 PF00171 Aldehyde dehydrogenase family JVX96_07325 PF01557 Fumarylacetoacetate (FAA) hydrolase family JVX96_07330 PF01557 Fumarylacetoacetate (FAA) hydrolase family JVX96_07335 PF01047 MarR family JVX96_07345 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_07350 PF18073 Rubredoxin metal binding domain JVX96_07355 PF02028 BCCT, betaine/carnitine/choline family transporter JVX96_07370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_07370 PF03466 LysR substrate binding domain JVX96_07375 PF07690 Major Facilitator Superfamily JVX96_07380 PF01546 Peptidase family M20/M25/M40 JVX96_07380 PF07687 Peptidase dimerisation domain JVX96_07385 PF04381 Putative exonuclease, RdgC JVX96_07390 PF01063 Amino-transferase class IV JVX96_07410 PF00512 His Kinase A (phospho-acceptor) domain JVX96_07410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JVX96_07410 PF00672 HAMP domain JVX96_07415 PF00072 Response regulator receiver domain JVX96_07415 PF00486 Transcriptional regulatory protein, C terminal JVX96_07420 PF01266 FAD dependent oxidoreductase JVX96_07430 PF02801 Beta-ketoacyl synthase, C-terminal domain JVX96_07430 PF00109 Beta-ketoacyl synthase, N-terminal domain JVX96_07435 PF07690 Major Facilitator Superfamily JVX96_07440 PF01435 Peptidase family M48 JVX96_07445 PF01425 Amidase JVX96_07450 PF09084 NMT1/THI5 like JVX96_07455 PF00528 Binding-protein-dependent transport system inner membrane component JVX96_07460 PF00005 ABC transporter JVX96_07470 PF01425 Amidase JVX96_07480 PF02608 ABC transporter substrate-binding protein PnrA-like JVX96_07490 PF02653 Branched-chain amino acid transport system / permease component JVX96_07495 PF00795 Carbon-nitrogen hydrolase JVX96_07500 PF00857 Isochorismatase family JVX96_07505 PF00005 ABC transporter JVX96_07510 PF00857 Isochorismatase family JVX96_07515 PF07729 FCD domain JVX96_07515 PF00392 Bacterial regulatory proteins, gntR family JVX96_07520 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_07525 PF01494 FAD binding domain JVX96_07530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_07530 PF03466 LysR substrate binding domain JVX96_07535 PF03372 Endonuclease/Exonuclease/phosphatase family JVX96_07540 PF00156 Phosphoribosyl transferase domain JVX96_07550 PF02934 GatB/GatE catalytic domain JVX96_07550 PF02637 GatB domain JVX96_07555 PF01425 Amidase JVX96_07560 PF02686 Glu-tRNAGln amidotransferase C subunit JVX96_07570 PF04085 rod shape-determining protein MreC JVX96_07580 PF03717 Penicillin-binding Protein dimerisation domain JVX96_07580 PF00905 Penicillin binding protein transpeptidase domain JVX96_07585 PF01557 Fumarylacetoacetate (FAA) hydrolase family JVX96_07590 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_07595 PF04209 homogentisate 1,2-dioxygenase JVX96_07605 PF01494 FAD binding domain JVX96_07620 PF02146 Sir2 family JVX96_07640 PF09383 NIL domain JVX96_07640 PF00005 ABC transporter JVX96_07645 PF02405 Permease MlaE JVX96_07650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_07650 PF03466 LysR substrate binding domain JVX96_07655 PF00171 Aldehyde dehydrogenase family JVX96_07660 PF00732 GMC oxidoreductase JVX96_07660 PF05199 GMC oxidoreductase JVX96_07665 PF02909 Tetracyclin repressor-like, C-terminal domain JVX96_07665 PF00440 Bacterial regulatory proteins, tetR family JVX96_07670 PF07690 Major Facilitator Superfamily JVX96_07680 PF01494 FAD binding domain JVX96_07685 PF07992 Pyridine nucleotide-disulphide oxidoreductase JVX96_07685 PF04324 BFD-like [2Fe-2S] binding domain JVX96_07695 PF00528 Binding-protein-dependent transport system inner membrane component JVX96_07700 PF00528 Binding-protein-dependent transport system inner membrane component JVX96_07705 PF08402 TOBE domain JVX96_07705 PF00005 ABC transporter JVX96_07725 PF00171 Aldehyde dehydrogenase family JVX96_07735 PF00155 Aminotransferase class I and II JVX96_07745 PF00909 Ammonium Transporter Family JVX96_07750 PF01925 Sulfite exporter TauE/SafE JVX96_07755 PF01970 Tripartite tricarboxylate transporter TctA family JVX96_07760 PF07331 Tripartite tricarboxylate transporter TctB family JVX96_07765 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) JVX96_07775 PF01253 Translation initiation factor SUI1 JVX96_07780 PF00270 DEAD/DEAH box helicase JVX96_07780 PF00271 Helicase conserved C-terminal domain JVX96_07785 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JVX96_07785 PF02770 Acyl-CoA dehydrogenase, middle domain JVX96_07785 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JVX96_07790 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JVX96_07790 PF02770 Acyl-CoA dehydrogenase, middle domain JVX96_07790 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JVX96_07800 PF00364 Biotin-requiring enzyme JVX96_07800 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JVX96_07800 PF00289 Biotin carboxylase, N-terminal domain JVX96_07800 PF02785 Biotin carboxylase C-terminal domain JVX96_07805 PF01039 Carboxyl transferase domain JVX96_07810 PF00563 EAL domain JVX96_07810 PF03707 Bacterial signalling protein N terminal repeat JVX96_07810 PF00990 Diguanylate cyclase, GGDEF domain JVX96_07820 PF04286 Protein of unknown function (DUF445) JVX96_07825 PF01546 Peptidase family M20/M25/M40 JVX96_07825 PF07687 Peptidase dimerisation domain JVX96_07835 PF01546 Peptidase family M20/M25/M40 JVX96_07835 PF07687 Peptidase dimerisation domain JVX96_07850 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JVX96_07850 PF00384 Molybdopterin oxidoreductase JVX96_07850 PF01568 Molydopterin dinucleotide binding domain JVX96_07865 PF02515 CoA-transferase family III JVX96_07895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_07895 PF03466 LysR substrate binding domain JVX96_07900 PF07883 Cupin domain JVX96_07905 PF01557 Fumarylacetoacetate (FAA) hydrolase family JVX96_07910 PF01494 FAD binding domain JVX96_07915 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_07920 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_07925 PF13932 GidA associated domain JVX96_07925 PF01134 Glucose inhibited division protein A JVX96_07955 PF02653 Branched-chain amino acid transport system / permease component JVX96_07960 PF11862 Domain of unknown function (DUF3382) JVX96_07960 PF02653 Branched-chain amino acid transport system / permease component JVX96_07965 PF00005 ABC transporter JVX96_07965 PF12399 Branched-chain amino acid ATP-binding cassette transporter JVX96_07970 PF00005 ABC transporter JVX96_07985 PF00890 FAD binding domain JVX96_07990 PF13417 Glutathione S-transferase, N-terminal domain JVX96_07990 PF00043 Glutathione S-transferase, C-terminal domain JVX96_08000 PF00916 Sulfate permease family JVX96_08000 PF01740 STAS domain JVX96_08005 PF00005 ABC transporter JVX96_08010 PF12399 Branched-chain amino acid ATP-binding cassette transporter JVX96_08010 PF00005 ABC transporter JVX96_08015 PF11862 Domain of unknown function (DUF3382) JVX96_08015 PF02653 Branched-chain amino acid transport system / permease component JVX96_08020 PF02653 Branched-chain amino acid transport system / permease component JVX96_08030 PF00137 ATP synthase subunit C JVX96_08040 PF01791 DeoC/LacD family aldolase JVX96_08045 PF00248 Aldo/keto reductase family JVX96_08050 PF02653 Branched-chain amino acid transport system / permease component JVX96_08055 PF00005 ABC transporter JVX96_08065 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JVX96_08065 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JVX96_08070 PF01266 FAD dependent oxidoreductase JVX96_08070 PF16901 C-terminal domain of alpha-glycerophosphate oxidase JVX96_08075 PF07702 UTRA domain JVX96_08075 PF00392 Bacterial regulatory proteins, gntR family JVX96_08080 PF17760 UvrA interaction domain JVX96_08080 PF17755 UvrA DNA-binding domain JVX96_08085 PF00654 Voltage gated chloride channel JVX96_08090 PF00436 Single-strand binding protein family JVX96_08095 PF01709 Transcriptional regulator JVX96_08105 PF03466 LysR substrate binding domain JVX96_08105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_08110 PF00202 Aminotransferase class-III JVX96_08120 PF07690 Major Facilitator Superfamily JVX96_08130 PF00005 ABC transporter JVX96_08140 PF02632 BioY family JVX96_08155 PF00857 Isochorismatase family JVX96_08185 PF00296 Luciferase-like monooxygenase JVX96_08190 PF13193 AMP-binding enzyme C-terminal domain JVX96_08190 PF00501 AMP-binding enzyme JVX96_08210 PF00486 Transcriptional regulatory protein, C terminal JVX96_08210 PF00072 Response regulator receiver domain JVX96_08215 PF01262 Alanine dehydrogenase/PNT, C-terminal domain JVX96_08215 PF05222 Alanine dehydrogenase/PNT, N-terminal domain JVX96_08220 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch JVX96_08225 PF02233 NAD(P) transhydrogenase beta subunit JVX96_08230 PF00501 AMP-binding enzyme JVX96_08230 PF13193 AMP-binding enzyme C-terminal domain JVX96_08235 PF00528 Binding-protein-dependent transport system inner membrane component JVX96_08240 PF12911 N-terminal TM domain of oligopeptide transport permease C JVX96_08240 PF00528 Binding-protein-dependent transport system inner membrane component JVX96_08245 PF00005 ABC transporter JVX96_08245 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JVX96_08250 PF00005 ABC transporter JVX96_08250 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JVX96_08255 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JVX96_08260 PF01048 Phosphorylase superfamily JVX96_08265 PF01544 CorA-like Mg2+ transporter protein JVX96_08270 PF13361 UvrD-like helicase C-terminal domain JVX96_08270 PF00580 UvrD/REP helicase N-terminal domain JVX96_08275 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein JVX96_08280 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JVX96_08285 PF02603 HPr Serine kinase N terminus JVX96_08285 PF07475 HPr Serine kinase C-terminal domain JVX96_08290 PF01475 Ferric uptake regulator family JVX96_08295 PF04355 SmpA / OmlA family JVX96_08300 PF01113 Dihydrodipicolinate reductase, N-terminus JVX96_08300 PF05173 Dihydrodipicolinate reductase, C-terminus JVX96_08305 PF01618 MotA/TolQ/ExbB proton channel family JVX96_08310 PF02472 Biopolymer transport protein ExbD/TolR JVX96_08320 PF00343 Carbohydrate phosphorylase JVX96_08325 PF00534 Glycosyl transferases group 1 JVX96_08325 PF08323 Starch synthase catalytic domain JVX96_08330 PF00483 Nucleotidyl transferase JVX96_08335 PF00128 Alpha amylase, catalytic domain JVX96_08335 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JVX96_08335 PF18390 Glycogen debranching enzyme C-terminal domain JVX96_08340 PF00128 Alpha amylase, catalytic domain JVX96_08340 PF02806 Alpha amylase, C-terminal all-beta domain JVX96_08340 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JVX96_08345 PF00128 Alpha amylase, catalytic domain JVX96_08355 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_08360 PF13603 Leucyl-tRNA synthetase, Domain 2 JVX96_08360 PF00133 tRNA synthetases class I (I, L, M and V) JVX96_08360 PF09334 tRNA synthetases class I (M) JVX96_08360 PF08264 Anticodon-binding domain of tRNA JVX96_08375 PF00171 Aldehyde dehydrogenase family JVX96_08385 PF02705 K+ potassium transporter JVX96_08400 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain JVX96_08400 PF02951 Prokaryotic glutathione synthetase, N-terminal domain JVX96_08405 PF00593 TonB dependent receptor JVX96_08405 PF07715 TonB-dependent Receptor Plug Domain JVX96_08410 PF13230 Glutamine amidotransferases class-II JVX96_08420 PF07690 Major Facilitator Superfamily JVX96_08425 PF10005 zinc-ribbon domain JVX96_08425 PF15887 Putative zinc-binding metallo-peptidase JVX96_08435 PF00365 Phosphofructokinase JVX96_08440 PF00378 Enoyl-CoA hydratase/isomerase JVX96_08445 PF00108 Thiolase, N-terminal domain JVX96_08445 PF02803 Thiolase, C-terminal domain JVX96_08455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_08455 PF03466 LysR substrate binding domain JVX96_08460 PF02469 Fasciclin domain JVX96_08480 PF06250 YhcG PDDEXK nuclease domain JVX96_08480 PF17761 DUF1016 N-terminal domain JVX96_08485 PF01274 Malate synthase JVX96_08490 PF00155 Aminotransferase class I and II JVX96_08495 PF01614 Bacterial transcriptional regulator JVX96_08495 PF09339 IclR helix-turn-helix domain JVX96_08500 PF00682 HMGL-like JVX96_08505 PF02515 CoA-transferase family III JVX96_08510 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_08515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_08515 PF03466 LysR substrate binding domain JVX96_08530 PF05746 DALR anticodon binding domain JVX96_08530 PF00750 tRNA synthetases class I (R) JVX96_08530 PF03485 Arginyl tRNA synthetase N terminal domain JVX96_08540 PF00085 Thioredoxin JVX96_08540 PF01323 DSBA-like thioredoxin domain JVX96_08545 PF03968 OstA-like protein JVX96_08550 PF12399 Branched-chain amino acid ATP-binding cassette transporter JVX96_08550 PF00005 ABC transporter JVX96_08555 PF00309 Sigma-54 factor, Activator interacting domain (AID) JVX96_08555 PF04552 Sigma-54, DNA binding domain JVX96_08555 PF04963 Sigma-54 factor, core binding domain JVX96_08560 PF13091 PLD-like domain JVX96_08585 PF01292 Prokaryotic cytochrome b561 JVX96_08590 PF00512 His Kinase A (phospho-acceptor) domain JVX96_08590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JVX96_08595 PF01170 Putative RNA methylase family UPF0020 JVX96_08595 PF02926 THUMP domain JVX96_08630 PF01645 Conserved region in glutamate synthase JVX96_08635 PF03695 Uncharacterised protein family (UPF0149) JVX96_08635 PF02810 SEC-C motif JVX96_08655 PF02464 Competence-damaged protein JVX96_08665 PF07690 Major Facilitator Superfamily JVX96_08670 PF02769 AIR synthase related protein, C-terminal domain JVX96_08670 PF00586 AIR synthase related protein, N-terminal domain JVX96_08675 PF04107 Glutamate-cysteine ligase family 2(GCS2) JVX96_08690 PF04379 ApaG domain JVX96_08695 PF00834 Ribulose-phosphate 3 epimerase family JVX96_08710 PF02735 Ku70/Ku80 beta-barrel domain JVX96_08715 PF01068 ATP dependent DNA ligase domain JVX96_08715 PF04679 ATP dependent DNA ligase C terminal region JVX96_08715 PF13298 DNA polymerase Ligase (LigD) JVX96_08730 PF06628 Catalase-related immune-responsive JVX96_08730 PF00199 Catalase JVX96_08730 PF18011 C-terminal domain found in long catalases JVX96_08740 PF08479 POTRA domain, ShlB-type JVX96_08740 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB JVX96_08745 PF05860 haemagglutination activity domain JVX96_08765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JVX96_08765 PF00512 His Kinase A (phospho-acceptor) domain JVX96_08775 PF00512 His Kinase A (phospho-acceptor) domain JVX96_08775 PF18415 Histidine kinase receptor ArcB trans-membrane domain JVX96_08775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JVX96_08790 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE JVX96_08795 PF00691 OmpA family JVX96_08795 PF13677 Membrane MotB of proton-channel complex MotA/MotB JVX96_08800 PF06761 Intracellular multiplication and human macrophage-killing JVX96_08800 PF14331 ImcF-related N-terminal domain JVX96_08800 PF06744 Type VI secretion protein IcmF C-terminal JVX96_08810 PF00069 Protein kinase domain JVX96_08840 PF07024 ImpE protein JVX96_08845 PF04965 Gene 25-like lysozyme JVX96_08850 PF05947 Type VI secretion system, TssF JVX96_08860 PF00004 ATPase family associated with various cellular activities (AAA) JVX96_08860 PF07724 AAA domain (Cdc48 subfamily) JVX96_08860 PF17871 AAA lid domain JVX96_08860 PF10431 C-terminal, D2-small domain, of ClpB protein JVX96_08865 PF04717 Type VI secretion system, phage-baseplate injector JVX96_08865 PF06715 Gp5 C-terminal repeat (3 copies) JVX96_08890 PF04717 Type VI secretion system, phage-baseplate injector JVX96_08890 PF06715 Gp5 C-terminal repeat (3 copies) JVX96_08950 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath JVX96_08955 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 JVX96_08960 PF06812 ImpA, N-terminal, type VI secretion system JVX96_08980 PF00072 Response regulator receiver domain JVX96_08980 PF00196 Bacterial regulatory proteins, luxR family JVX96_08995 PF00586 AIR synthase related protein, N-terminal domain JVX96_08995 PF02769 AIR synthase related protein, C-terminal domain JVX96_09010 PF00795 Carbon-nitrogen hydrolase JVX96_09020 PF00392 Bacterial regulatory proteins, gntR family JVX96_09020 PF00155 Aminotransferase class I and II JVX96_09025 PF02082 Transcriptional regulator JVX96_09030 PF01062 Bestrophin, RFP-TM, chloride channel JVX96_09040 PF13419 Haloacid dehalogenase-like hydrolase JVX96_09050 PF04715 Anthranilate synthase component I, N terminal region JVX96_09050 PF00425 chorismate binding enzyme JVX96_09060 PF00117 Glutamine amidotransferase class-I JVX96_09065 PF01212 Beta-eliminating lyase JVX96_09070 PF01810 LysE type translocator JVX96_09075 PF00591 Glycosyl transferase family, a/b domain JVX96_09075 PF02885 Glycosyl transferase family, helical bundle domain JVX96_09080 PF00218 Indole-3-glycerol phosphate synthase JVX96_09085 PF03167 Uracil DNA glycosylase superfamily JVX96_09105 PF03143 Elongation factor Tu C-terminal domain JVX96_09105 PF03144 Elongation factor Tu domain 2 JVX96_09105 PF00009 Elongation factor Tu GTP binding domain JVX96_09120 PF02357 Transcription termination factor nusG JVX96_09120 PF00467 KOW motif JVX96_09125 PF00298 Ribosomal protein L11, RNA binding domain JVX96_09125 PF03946 Ribosomal protein L11, N-terminal domain JVX96_09130 PF00687 Ribosomal protein L1p/L10e family JVX96_09135 PF00466 Ribosomal protein L10 JVX96_09140 PF16320 Ribosomal protein L7/L12 dimerisation domain JVX96_09140 PF00542 Ribosomal protein L7/L12 C-terminal domain JVX96_09145 PF04560 RNA polymerase Rpb2, domain 7 JVX96_09145 PF10385 RNA polymerase beta subunit external 1 domain JVX96_09145 PF04565 RNA polymerase Rpb2, domain 3 JVX96_09145 PF04563 RNA polymerase beta subunit JVX96_09145 PF00562 RNA polymerase Rpb2, domain 6 JVX96_09145 PF04561 RNA polymerase Rpb2, domain 2 JVX96_09150 PF05000 RNA polymerase Rpb1, domain 4 JVX96_09150 PF04983 RNA polymerase Rpb1, domain 3 JVX96_09150 PF00623 RNA polymerase Rpb1, domain 2 JVX96_09150 PF04997 RNA polymerase Rpb1, domain 1 JVX96_09150 PF04998 RNA polymerase Rpb1, domain 5 JVX96_09160 PF01029 NusB family JVX96_09160 PF01189 16S rRNA methyltransferase RsmB/F JVX96_09170 PF00672 HAMP domain JVX96_09170 PF00989 PAS fold JVX96_09170 PF00512 His Kinase A (phospho-acceptor) domain JVX96_09170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JVX96_09175 PF02954 Bacterial regulatory protein, Fis family JVX96_09175 PF00072 Response regulator receiver domain JVX96_09175 PF00158 Sigma-54 interaction domain JVX96_09190 PF03706 Lysylphosphatidylglycerol synthase TM region JVX96_09195 PF03061 Thioesterase superfamily JVX96_09200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JVX96_09200 PF00512 His Kinase A (phospho-acceptor) domain JVX96_09200 PF01627 Hpt domain JVX96_09200 PF00989 PAS fold JVX96_09200 PF00072 Response regulator receiver domain JVX96_09200 PF00497 Bacterial extracellular solute-binding proteins, family 3 JVX96_09205 PF00072 Response regulator receiver domain JVX96_09205 PF00486 Transcriptional regulatory protein, C terminal JVX96_09210 PF17961 Bacterial Ig domain JVX96_09210 PF04650 YSIRK type signal peptide JVX96_09210 PF10425 C-terminus of bacterial fibrinogen-binding adhesin JVX96_09210 PF17210 SdrD B-like domain JVX96_09210 PF00746 LPXTG cell wall anchor motif JVX96_09225 PF03649 Uncharacterised protein family (UPF0014) JVX96_09230 PF00005 ABC transporter JVX96_09235 PF00593 TonB dependent receptor JVX96_09235 PF07715 TonB-dependent Receptor Plug Domain JVX96_09240 PF00171 Aldehyde dehydrogenase family JVX96_09250 PF00691 OmpA family JVX96_09250 PF13677 Membrane MotB of proton-channel complex MotA/MotB JVX96_09265 PF02540 NAD synthase JVX96_09270 PF02253 Phospholipase A1 JVX96_09280 PF13361 UvrD-like helicase C-terminal domain JVX96_09280 PF00580 UvrD/REP helicase N-terminal domain JVX96_09285 PF03547 Membrane transport protein JVX96_09305 PF00271 Helicase conserved C-terminal domain JVX96_09305 PF17764 3′ DNA-binding domain (3′BD) JVX96_09305 PF18074 Primosomal protein N C-terminal domain JVX96_09305 PF18319 PriA DNA helicase Cys-rich region (CRR) domain JVX96_09305 PF00270 DEAD/DEAH box helicase JVX96_09310 PF01208 Uroporphyrinogen decarboxylase (URO-D) JVX96_09315 PF07690 Major Facilitator Superfamily JVX96_09325 PF00578 AhpC/TSA family JVX96_09330 PF02683 Cytochrome C biogenesis protein transmembrane region JVX96_09330 PF13098 Thioredoxin-like domain JVX96_09330 PF11412 Disulphide bond corrector protein DsbC JVX96_09335 PF01411 tRNA synthetases class II (A) JVX96_09335 PF02272 DHHA1 domain JVX96_09335 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JVX96_09340 PF07995 Glucose / Sorbosone dehydrogenase JVX96_09350 PF00107 Zinc-binding dehydrogenase JVX96_09350 PF08240 Alcohol dehydrogenase GroES-like domain JVX96_09355 PF03466 LysR substrate binding domain JVX96_09355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_09360 PF00106 short chain dehydrogenase JVX96_09370 PF00535 Glycosyl transferase family 2 JVX96_09375 PF01522 Polysaccharide deacetylase JVX96_09375 PF14883 Hypothetical glycosyl hydrolase family 13 JVX96_09385 PF02633 Creatinine amidohydrolase JVX96_09390 PF00291 Pyridoxal-phosphate dependent enzyme JVX96_09395 PF01810 LysE type translocator JVX96_09405 PF02567 Phenazine biosynthesis-like protein JVX96_09410 PF00043 Glutathione S-transferase, C-terminal domain JVX96_09410 PF13417 Glutathione S-transferase, N-terminal domain JVX96_09415 PF02567 Phenazine biosynthesis-like protein JVX96_09420 PF01810 LysE type translocator JVX96_09425 PF00155 Aminotransferase class I and II JVX96_09430 PF00892 EamA-like transporter family JVX96_09440 PF00155 Aminotransferase class I and II JVX96_09440 PF00392 Bacterial regulatory proteins, gntR family JVX96_09460 PF01266 FAD dependent oxidoreductase JVX96_09465 PF16363 GDP-mannose 4,6 dehydratase JVX96_09470 PF04321 RmlD substrate binding domain JVX96_09475 PF00483 Nucleotidyl transferase JVX96_09480 PF01370 NAD dependent epimerase/dehydratase family JVX96_09485 PF00483 Nucleotidyl transferase JVX96_09495 PF00535 Glycosyl transferase family 2 JVX96_09505 PF00483 Nucleotidyl transferase JVX96_09510 PF16363 GDP-mannose 4,6 dehydratase JVX96_09515 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family JVX96_09525 PF00456 Transketolase, thiamine diphosphate binding domain JVX96_09530 PF02780 Transketolase, C-terminal domain JVX96_09530 PF02779 Transketolase, pyrimidine binding domain JVX96_09540 PF00535 Glycosyl transferase family 2 JVX96_09545 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase JVX96_09550 PF16363 GDP-mannose 4,6 dehydratase JVX96_09555 PF00535 Glycosyl transferase family 2 JVX96_09565 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family JVX96_09570 PF00535 Glycosyl transferase family 2 JVX96_09575 PF00534 Glycosyl transferases group 1 JVX96_09575 PF13439 Glycosyltransferase Family 4 JVX96_09590 PF00005 ABC transporter JVX96_09595 PF01061 ABC-2 type transporter JVX96_09600 PF00535 Glycosyl transferase family 2 JVX96_09605 PF00535 Glycosyl transferase family 2 JVX96_09615 PF00953 Glycosyl transferase family 4 JVX96_09620 PF00696 Amino acid kinase family JVX96_09625 PF00440 Bacterial regulatory proteins, tetR family JVX96_09630 PF02615 Malate/L-lactate dehydrogenase JVX96_09640 PF08666 SAF domain JVX96_09640 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus JVX96_09645 PF00392 Bacterial regulatory proteins, gntR family JVX96_09645 PF07729 FCD domain JVX96_09655 PF01557 Fumarylacetoacetate (FAA) hydrolase family JVX96_09660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_09660 PF03466 LysR substrate binding domain JVX96_09665 PF00106 short chain dehydrogenase JVX96_09690 PF12806 Acetyl-CoA dehydrogenase C-terminal like JVX96_09690 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JVX96_09690 PF02770 Acyl-CoA dehydrogenase, middle domain JVX96_09690 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JVX96_09700 PF00378 Enoyl-CoA hydratase/isomerase JVX96_09700 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JVX96_09700 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JVX96_09705 PF04480 Protein of unknown function (DUF559) JVX96_09710 PF02803 Thiolase, C-terminal domain JVX96_09710 PF00108 Thiolase, N-terminal domain JVX96_09720 PF00106 short chain dehydrogenase JVX96_09725 PF01323 DSBA-like thioredoxin domain JVX96_09730 PF00378 Enoyl-CoA hydratase/isomerase JVX96_09735 PF13458 Periplasmic binding protein JVX96_09740 PF03061 Thioesterase superfamily JVX96_09745 PF00005 ABC transporter JVX96_09745 PF00664 ABC transporter transmembrane region JVX96_09750 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JVX96_09750 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JVX96_09755 PF01425 Amidase JVX96_09760 PF03466 LysR substrate binding domain JVX96_09760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_09765 PF00206 Lyase JVX96_09765 PF10415 Fumarase C C-terminus JVX96_09770 PF00497 Bacterial extracellular solute-binding proteins, family 3 JVX96_09775 PF00528 Binding-protein-dependent transport system inner membrane component JVX96_09780 PF00528 Binding-protein-dependent transport system inner membrane component JVX96_09785 PF00005 ABC transporter JVX96_09790 PF03466 LysR substrate binding domain JVX96_09790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_09795 PF04205 FMN-binding domain JVX96_09795 PF03358 NADPH-dependent FMN reductase JVX96_09795 PF00890 FAD binding domain JVX96_09805 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_09810 PF01156 Inosine-uridine preferring nucleoside hydrolase JVX96_09825 PF01965 DJ-1/PfpI family JVX96_09830 PF03480 Bacterial extracellular solute-binding protein, family 7 JVX96_09835 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component JVX96_09835 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component JVX96_09840 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component JVX96_09860 PF03060 Nitronate monooxygenase JVX96_09865 PF00766 Electron transfer flavoprotein FAD-binding domain JVX96_09865 PF01012 Electron transfer flavoprotein domain JVX96_09870 PF01012 Electron transfer flavoprotein domain JVX96_09875 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_09880 PF00501 AMP-binding enzyme JVX96_09880 PF13193 AMP-binding enzyme C-terminal domain JVX96_09885 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_09890 PF02515 CoA-transferase family III JVX96_09895 PF00378 Enoyl-CoA hydratase/isomerase JVX96_09900 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JVX96_09900 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JVX96_09900 PF02770 Acyl-CoA dehydrogenase, middle domain JVX96_09905 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JVX96_09905 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JVX96_09905 PF02770 Acyl-CoA dehydrogenase, middle domain JVX96_09910 PF00108 Thiolase, N-terminal domain JVX96_09910 PF02803 Thiolase, C-terminal domain JVX96_09915 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JVX96_09915 PF00378 Enoyl-CoA hydratase/isomerase JVX96_09915 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JVX96_09920 PF03466 LysR substrate binding domain JVX96_09920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_09925 PF00990 Diguanylate cyclase, GGDEF domain JVX96_09930 PF01161 Phosphatidylethanolamine-binding protein JVX96_09945 PF03167 Uracil DNA glycosylase superfamily JVX96_09955 PF01979 Amidohydrolase family JVX96_09970 PF01435 Peptidase family M48 JVX96_09980 PF01613 Flavin reductase like domain JVX96_09995 PF00291 Pyridoxal-phosphate dependent enzyme JVX96_10005 PF01047 MarR family JVX96_10015 PF07869 Protein of unknown function (DUF1656) JVX96_10020 PF13533 Biotin-lipoyl like JVX96_10025 PF02321 Outer membrane efflux protein JVX96_10030 PF07690 Major Facilitator Superfamily JVX96_10040 PF01479 S4 domain JVX96_10040 PF00849 RNA pseudouridylate synthase JVX96_10050 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_10075 PF00474 Sodium:solute symporter family JVX96_10080 PF01979 Amidohydrolase family JVX96_10090 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JVX96_10105 PF00248 Aldo/keto reductase family JVX96_10110 PF07690 Major Facilitator Superfamily JVX96_10165 PF01804 Penicillin amidase JVX96_10175 PF08281 Sigma-70, region 4 JVX96_10175 PF04542 Sigma-70 region 2 JVX96_10190 PF03466 LysR substrate binding domain JVX96_10190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_10195 PF00857 Isochorismatase family JVX96_10205 PF01979 Amidohydrolase family JVX96_10205 PF13382 Adenine deaminase C-terminal domain JVX96_10215 PF07690 Major Facilitator Superfamily JVX96_10220 PF01678 Diaminopimelate epimerase JVX96_10235 PF00589 Phage integrase family JVX96_10235 PF02899 Phage integrase, N-terminal SAM-like domain JVX96_10240 PF17785 PUA-like domain JVX96_10240 PF10672 S-adenosylmethionine-dependent methyltransferase JVX96_10245 PF02492 CobW/HypB/UreG, nucleotide-binding domain JVX96_10245 PF07683 Cobalamin synthesis protein cobW C-terminal domain JVX96_10255 PF01258 Prokaryotic dksA/traR C4-type zinc finger JVX96_10265 PF00227 Proteasome subunit JVX96_10270 PF00004 ATPase family associated with various cellular activities (AAA) JVX96_10270 PF07724 AAA domain (Cdc48 subfamily) JVX96_10275 PF02381 MraZ protein, putative antitoxin-like JVX96_10280 PF01795 MraW methylase family JVX96_10290 PF00905 Penicillin binding protein transpeptidase domain JVX96_10290 PF03717 Penicillin-binding Protein dimerisation domain JVX96_10295 PF02875 Mur ligase family, glutamate ligase domain JVX96_10295 PF08245 Mur ligase middle domain JVX96_10300 PF01225 Mur ligase family, catalytic domain JVX96_10300 PF08245 Mur ligase middle domain JVX96_10300 PF02875 Mur ligase family, glutamate ligase domain JVX96_10305 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 JVX96_10305 PF00953 Glycosyl transferase family 4 JVX96_10310 PF02875 Mur ligase family, glutamate ligase domain JVX96_10310 PF08245 Mur ligase middle domain JVX96_10315 PF01098 Cell cycle protein JVX96_10320 PF03033 Glycosyltransferase family 28 N-terminal domain JVX96_10320 PF04101 Glycosyltransferase family 28 C-terminal domain JVX96_10325 PF08245 Mur ligase middle domain JVX96_10325 PF02875 Mur ligase family, glutamate ligase domain JVX96_10325 PF01225 Mur ligase family, catalytic domain JVX96_10330 PF07478 D-ala D-ala ligase C-terminus JVX96_10330 PF01820 D-ala D-ala ligase N-terminus JVX96_10335 PF03799 Cell division protein FtsQ JVX96_10335 PF08478 POTRA domain, FtsQ-type JVX96_10340 PF02491 SHS2 domain inserted in FTSA JVX96_10345 PF00091 Tubulin/FtsZ family, GTPase domain JVX96_10345 PF12327 FtsZ family, C-terminal domain JVX96_10350 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase JVX96_10360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_10360 PF03466 LysR substrate binding domain JVX96_10365 PF00464 Serine hydroxymethyltransferase JVX96_10370 PF02075 Crossover junction endodeoxyribonuclease RuvC JVX96_10390 PF00912 Transglycosylase JVX96_10395 PF08501 Shikimate dehydrogenase substrate binding domain JVX96_10395 PF18317 Shikimate 5'-dehydrogenase C-terminal domain JVX96_10395 PF01488 Shikimate / quinate 5-dehydrogenase JVX96_10405 PF00773 RNB domain JVX96_10405 PF17876 Cold shock domain JVX96_10405 PF08206 Ribonuclease B OB domain JVX96_10405 PF00575 S1 RNA binding domain JVX96_10410 PF05728 Uncharacterised protein family (UPF0227) JVX96_10415 PF00196 Bacterial regulatory proteins, luxR family JVX96_10415 PF00072 Response regulator receiver domain JVX96_10425 PF01098 Cell cycle protein JVX96_10430 PF01523 Putative modulator of DNA gyrase JVX96_10440 PF00793 DAHP synthetase I family JVX96_10450 PF02875 Mur ligase family, glutamate ligase domain JVX96_10450 PF08245 Mur ligase middle domain JVX96_10450 PF01225 Mur ligase family, catalytic domain JVX96_10460 PF00578 AhpC/TSA family JVX96_10465 PF00364 Biotin-requiring enzyme JVX96_10470 PF02785 Biotin carboxylase C-terminal domain JVX96_10470 PF00289 Biotin carboxylase, N-terminal domain JVX96_10470 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JVX96_10485 PF00294 pfkB family carbohydrate kinase JVX96_10495 PF00268 Ribonucleotide reductase, small chain JVX96_10500 PF03477 ATP cone domain JVX96_10500 PF02867 Ribonucleotide reductase, barrel domain JVX96_10500 PF00317 Ribonucleotide reductase, all-alpha domain JVX96_10505 PF01510 N-acetylmuramoyl-L-alanine amidase JVX96_10510 PF02954 Bacterial regulatory protein, Fis family JVX96_10510 PF00158 Sigma-54 interaction domain JVX96_10510 PF00072 Response regulator receiver domain JVX96_10515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JVX96_10515 PF00512 His Kinase A (phospho-acceptor) domain JVX96_10525 PF01578 Cytochrome C assembly protein JVX96_10530 PF00448 SRP54-type protein, GTPase domain JVX96_10530 PF02881 SRP54-type protein, helical bundle domain JVX96_10530 PF02978 Signal peptide binding domain JVX96_10545 PF13360 PQQ-like domain JVX96_10545 PF01011 PQQ enzyme repeat JVX96_10550 PF00535 Glycosyl transferase family 2 JVX96_10560 PF00158 Sigma-54 interaction domain JVX96_10560 PF00072 Response regulator receiver domain JVX96_10570 PF00512 His Kinase A (phospho-acceptor) domain JVX96_10570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JVX96_10575 PF01938 TRAM domain JVX96_10575 PF04055 Radical SAM superfamily JVX96_10575 PF00919 Uncharacterized protein family UPF0004 JVX96_10585 PF13533 Biotin-lipoyl like JVX96_10590 PF00873 AcrB/AcrD/AcrF family JVX96_10595 PF00300 Histidine phosphatase superfamily (branch 1) JVX96_10605 PF01171 PP-loop family JVX96_10630 PF02668 Taurine catabolism dioxygenase TauD, TfdA family JVX96_10640 PF00005 ABC transporter JVX96_10645 PF00528 Binding-protein-dependent transport system inner membrane component JVX96_10650 PF00459 Inositol monophosphatase family JVX96_10660 PF00480 ROK family JVX96_10675 PF00982 Glycosyltransferase family 20 JVX96_10680 PF00723 Glycosyl hydrolases family 15 JVX96_10685 PF02358 Trehalose-phosphatase JVX96_10690 PF12627 Probable RNA and SrmB- binding site of polymerase A JVX96_10690 PF01966 HD domain JVX96_10690 PF01743 Poly A polymerase head domain JVX96_10695 PF03922 OmpW family JVX96_10700 PF02798 Glutathione S-transferase, N-terminal domain JVX96_10700 PF14497 Glutathione S-transferase, C-terminal domain JVX96_10705 PF02308 MgtC family JVX96_10710 PF01464 Transglycosylase SLT domain JVX96_10710 PF14718 Soluble lytic murein transglycosylase L domain JVX96_10715 PF01812 5-formyltetrahydrofolate cyclo-ligase family JVX96_10720 PF03466 LysR substrate binding domain JVX96_10720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_10735 PF13545 Crp-like helix-turn-helix domain JVX96_10735 PF00027 Cyclic nucleotide-binding domain JVX96_10740 PF03466 LysR substrate binding domain JVX96_10740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_10745 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_10750 PF13380 CoA binding domain JVX96_10750 PF13607 Succinyl-CoA ligase like flavodoxin domain JVX96_10755 PF01575 MaoC like domain JVX96_10765 PF00378 Enoyl-CoA hydratase/isomerase JVX96_10770 PF00108 Thiolase, N-terminal domain JVX96_10770 PF02803 Thiolase, C-terminal domain JVX96_10775 PF02515 CoA-transferase family III JVX96_10785 PF00132 Bacterial transferase hexapeptide (six repeats) JVX96_10785 PF12804 MobA-like NTP transferase domain JVX96_10795 PF01380 SIS domain JVX96_10800 PF07715 TonB-dependent Receptor Plug Domain JVX96_10800 PF00593 TonB dependent receptor JVX96_10805 PF04304 Protein of unknown function (DUF454) JVX96_10815 PF18327 Proline utilization A proline dehydrogenase N-terminal domain JVX96_10815 PF14850 DNA-binding domain of Proline dehydrogenase JVX96_10815 PF01619 Proline dehydrogenase JVX96_10815 PF00171 Aldehyde dehydrogenase family JVX96_10835 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JVX96_10855 PF01979 Amidohydrolase family JVX96_10860 PF00561 alpha/beta hydrolase fold JVX96_10860 PF08386 TAP-like protein JVX96_10865 PF01557 Fumarylacetoacetate (FAA) hydrolase family JVX96_10895 PF01225 Mur ligase family, catalytic domain JVX96_10895 PF08245 Mur ligase middle domain JVX96_10895 PF02875 Mur ligase family, glutamate ligase domain JVX96_10905 PF01263 Aldose 1-epimerase JVX96_10910 PF08450 SMP-30/Gluconolactonase/LRE-like region JVX96_10920 PF03466 LysR substrate binding domain JVX96_10920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_10925 PF00171 Aldehyde dehydrogenase family JVX96_10930 PF13407 Periplasmic binding protein domain JVX96_10935 PF13407 Periplasmic binding protein domain JVX96_10940 PF00005 ABC transporter JVX96_10945 PF02653 Branched-chain amino acid transport system / permease component JVX96_10950 PF00005 ABC transporter JVX96_10955 PF02653 Branched-chain amino acid transport system / permease component JVX96_10960 PF02653 Branched-chain amino acid transport system / permease component JVX96_10965 PF00920 Dehydratase family JVX96_10970 PF00701 Dihydrodipicolinate synthetase family JVX96_10990 PF08245 Mur ligase middle domain JVX96_10990 PF02875 Mur ligase family, glutamate ligase domain JVX96_10990 PF08443 RimK-like ATP-grasp domain JVX96_10995 PF08443 RimK-like ATP-grasp domain JVX96_10995 PF08245 Mur ligase middle domain JVX96_10995 PF02875 Mur ligase family, glutamate ligase domain JVX96_11000 PF00005 ABC transporter JVX96_11000 PF00664 ABC transporter transmembrane region JVX96_11015 PF00245 Alkaline phosphatase JVX96_11020 PF00245 Alkaline phosphatase JVX96_11030 PF06508 Queuosine biosynthesis protein QueC JVX96_11035 PF06472 ABC transporter transmembrane region 2 JVX96_11035 PF00005 ABC transporter JVX96_11050 PF00005 ABC transporter JVX96_11050 PF08402 TOBE domain JVX96_11055 PF00528 Binding-protein-dependent transport system inner membrane component JVX96_11060 PF01266 FAD dependent oxidoreductase JVX96_11065 PF13419 Haloacid dehalogenase-like hydrolase JVX96_11070 PF07690 Major Facilitator Superfamily JVX96_11080 PF00034 Cytochrome c JVX96_11085 PF00034 Cytochrome c JVX96_11085 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JVX96_11090 PF01979 Amidohydrolase family JVX96_11100 PF00482 Type II secretion system (T2SS), protein F JVX96_11105 PF00437 Type II/IV secretion system protein JVX96_11110 PF03958 Bacterial type II/III secretion system short domain JVX96_11110 PF00263 Bacterial type II and III secretion system protein JVX96_11135 PF11612 Type II secretion system (T2SS), protein J JVX96_11135 PF07963 Prokaryotic N-terminal methylation motif JVX96_11140 PF07963 Prokaryotic N-terminal methylation motif JVX96_11140 PF02501 Type II secretion system (T2SS), protein I JVX96_11150 PF07963 Prokaryotic N-terminal methylation motif JVX96_11150 PF08334 Type II secretion system (T2SS), protein G JVX96_11160 PF00291 Pyridoxal-phosphate dependent enzyme JVX96_11160 PF00585 C-terminal regulatory domain of Threonine dehydratase JVX96_11170 PF13609 Gram-negative porin JVX96_11175 PF02566 OsmC-like protein JVX96_11180 PF03232 Ubiquinone biosynthesis protein COQ7 JVX96_11185 PF13609 Gram-negative porin JVX96_11190 PF00528 Binding-protein-dependent transport system inner membrane component JVX96_11195 PF01546 Peptidase family M20/M25/M40 JVX96_11195 PF07687 Peptidase dimerisation domain JVX96_11205 PF00528 Binding-protein-dependent transport system inner membrane component JVX96_11205 PF12911 N-terminal TM domain of oligopeptide transport permease C JVX96_11210 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JVX96_11210 PF00005 ABC transporter JVX96_11215 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JVX96_11215 PF00005 ABC transporter JVX96_11220 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase JVX96_11225 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain JVX96_11225 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain JVX96_11235 PF00528 Binding-protein-dependent transport system inner membrane component JVX96_11240 PF00005 ABC transporter JVX96_11240 PF08402 TOBE domain JVX96_11255 PF00923 Transaldolase/Fructose-6-phosphate aldolase JVX96_11260 PF00342 Phosphoglucose isomerase JVX96_11270 PF04166 Pyridoxal phosphate biosynthetic protein PdxA JVX96_11275 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_11280 PF03466 LysR substrate binding domain JVX96_11280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_11290 PF00528 Binding-protein-dependent transport system inner membrane component JVX96_11295 PF00528 Binding-protein-dependent transport system inner membrane component JVX96_11300 PF17912 MalK OB fold domain JVX96_11300 PF03459 TOBE domain JVX96_11300 PF00005 ABC transporter JVX96_11305 PF01232 Mannitol dehydrogenase Rossmann domain JVX96_11305 PF08125 Mannitol dehydrogenase C-terminal domain JVX96_11315 PF00923 Transaldolase/Fructose-6-phosphate aldolase JVX96_11320 PF00294 pfkB family carbohydrate kinase JVX96_11325 PF12833 Helix-turn-helix domain JVX96_11325 PF00072 Response regulator receiver domain JVX96_11330 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JVX96_11330 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JVX96_11340 PF07690 Major Facilitator Superfamily JVX96_11350 PF00118 TCP-1/cpn60 chaperonin family JVX96_11355 PF00166 Chaperonin 10 Kd subunit JVX96_11360 PF04542 Sigma-70 region 2 JVX96_11360 PF08281 Sigma-70, region 4 JVX96_11370 PF07715 TonB-dependent Receptor Plug Domain JVX96_11380 PF00175 Oxidoreductase NAD-binding domain JVX96_11380 PF00258 Flavodoxin JVX96_11380 PF00667 FAD binding domain JVX96_11390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JVX96_11390 PF08521 Two-component sensor kinase N-terminal JVX96_11390 PF00512 His Kinase A (phospho-acceptor) domain JVX96_11395 PF00486 Transcriptional regulatory protein, C terminal JVX96_11395 PF00072 Response regulator receiver domain JVX96_11400 PF13091 PLD-like domain JVX96_11405 PF07715 TonB-dependent Receptor Plug Domain JVX96_11405 PF00593 TonB dependent receptor JVX96_11420 PF07715 TonB-dependent Receptor Plug Domain JVX96_11420 PF00593 TonB dependent receptor JVX96_11425 PF00528 Binding-protein-dependent transport system inner membrane component JVX96_11430 PF00005 ABC transporter JVX96_11440 PF00486 Transcriptional regulatory protein, C terminal JVX96_11440 PF00072 Response regulator receiver domain JVX96_11445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JVX96_11445 PF00512 His Kinase A (phospho-acceptor) domain JVX96_11450 PF02773 S-adenosylmethionine synthetase, C-terminal domain JVX96_11450 PF00438 S-adenosylmethionine synthetase, N-terminal domain JVX96_11450 PF02772 S-adenosylmethionine synthetase, central domain JVX96_11460 PF03279 Bacterial lipid A biosynthesis acyltransferase JVX96_11465 PF00561 alpha/beta hydrolase fold JVX96_11470 PF01926 50S ribosome-binding GTPase JVX96_11475 PF00034 Cytochrome c JVX96_11480 PF05140 ResB-like family JVX96_11485 PF01578 Cytochrome C assembly protein JVX96_11490 PF00174 Oxidoreductase molybdopterin binding domain JVX96_11495 PF01794 Ferric reductase like transmembrane component JVX96_11500 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain JVX96_11500 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain JVX96_11510 PF01491 Frataxin-like domain JVX96_11515 PF00905 Penicillin binding protein transpeptidase domain JVX96_11515 PF00912 Transglycosylase JVX96_11515 PF17092 Penicillin-binding protein OB-like domain JVX96_11520 PF11104 Type IV pilus assembly protein PilM; JVX96_11525 PF05137 Fimbrial assembly protein (PilN) JVX96_11535 PF04351 Pilus assembly protein, PilP JVX96_11540 PF00263 Bacterial type II and III secretion system protein JVX96_11540 PF11741 AMIN domain JVX96_11540 PF03958 Bacterial type II/III secretion system short domain JVX96_11540 PF07660 Secretin and TonB N terminus short domain JVX96_11545 PF01202 Shikimate kinase JVX96_11550 PF01761 3-dehydroquinate synthase JVX96_11555 PF13286 Phosphohydrolase-associated domain JVX96_11555 PF01966 HD domain JVX96_11585 PF04898 Glutamate synthase central domain JVX96_11585 PF01645 Conserved region in glutamate synthase JVX96_11585 PF01493 GXGXG motif JVX96_11585 PF00310 Glutamine amidotransferases class-II JVX96_11590 PF07992 Pyridine nucleotide-disulphide oxidoreductase JVX96_11590 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster JVX96_11595 PF00005 ABC transporter JVX96_11600 PF02405 Permease MlaE JVX96_11605 PF02470 MlaD protein JVX96_11610 PF04333 MlaA lipoprotein JVX96_11625 PF00005 ABC transporter JVX96_11630 PF01061 ABC-2 type transporter JVX96_11635 PF01722 BolA-like protein JVX96_11640 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JVX96_11645 PF01634 ATP phosphoribosyltransferase JVX96_11650 PF00815 Histidinol dehydrogenase JVX96_11665 PF00155 Aminotransferase class I and II JVX96_11670 PF00475 Imidazoleglycerol-phosphate dehydratase JVX96_11675 PF00117 Glutamine amidotransferase class-I JVX96_11680 PF00977 Histidine biosynthesis protein JVX96_11690 PF00497 Bacterial extracellular solute-binding proteins, family 3 JVX96_11695 PF00375 Sodium:dicarboxylate symporter family JVX96_11705 PF00977 Histidine biosynthesis protein JVX96_11710 PF01502 Phosphoribosyl-AMP cyclohydrolase JVX96_11715 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase JVX96_11725 PF01230 HIT domain JVX96_11730 PF02416 mttA/Hcf106 family JVX96_11735 PF02416 mttA/Hcf106 family JVX96_11740 PF00902 Sec-independent protein translocase protein (TatC) JVX96_11745 PF17820 PDZ domain JVX96_11745 PF13180 PDZ domain JVX96_11750 PF07690 Major Facilitator Superfamily JVX96_11755 PF01784 NIF3 (NGG1p interacting factor 3) JVX96_11760 PF04166 Pyridoxal phosphate biosynthetic protein PdxA JVX96_11765 PF01741 Large-conductance mechanosensitive channel, MscL JVX96_11780 PF00196 Bacterial regulatory proteins, luxR family JVX96_11780 PF00072 Response regulator receiver domain JVX96_11785 PF00355 Rieske [2Fe-2S] domain JVX96_11785 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal JVX96_11790 PF00033 Cytochrome b/b6/petB JVX96_11790 PF00032 Cytochrome b(C-terminal)/b6/petD JVX96_11795 PF02167 Cytochrome C1 family JVX96_11800 PF00043 Glutathione S-transferase, C-terminal domain JVX96_11800 PF02798 Glutathione S-transferase, N-terminal domain JVX96_11805 PF04386 Stringent starvation protein B JVX96_11815 PF00990 Diguanylate cyclase, GGDEF domain JVX96_11815 PF00563 EAL domain JVX96_11815 PF03707 Bacterial signalling protein N terminal repeat JVX96_11820 PF02272 DHHA1 domain JVX96_11820 PF01368 DHH family JVX96_11820 PF17768 RecJ OB domain JVX96_11830 PF12704 MacB-like periplasmic core domain JVX96_11830 PF02687 FtsX-like permease family JVX96_11835 PF00005 ABC transporter JVX96_11845 PF04542 Sigma-70 region 2 JVX96_11845 PF08281 Sigma-70, region 4 JVX96_11845 PF12680 SnoaL-like domain JVX96_11850 PF00574 Clp protease JVX96_11855 PF01042 Endoribonuclease L-PSP JVX96_11860 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JVX96_11865 PF10282 Lactonase, 7-bladed beta-propeller JVX96_11870 PF00528 Binding-protein-dependent transport system inner membrane component JVX96_11875 PF12911 N-terminal TM domain of oligopeptide transport permease C JVX96_11875 PF00528 Binding-protein-dependent transport system inner membrane component JVX96_11880 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JVX96_11880 PF00005 ABC transporter JVX96_11885 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JVX96_11885 PF00005 ABC transporter JVX96_11895 PF01418 Helix-turn-helix domain, rpiR family JVX96_11895 PF01380 SIS domain JVX96_11900 PF07969 Amidohydrolase family JVX96_11910 PF03466 LysR substrate binding domain JVX96_11910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_11915 PF00497 Bacterial extracellular solute-binding proteins, family 3 JVX96_11945 PF01740 STAS domain JVX96_11945 PF00916 Sulfate permease family JVX96_11950 PF00111 2Fe-2S iron-sulfur cluster binding domain JVX96_11950 PF01799 [2Fe-2S] binding domain JVX96_11955 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase JVX96_11960 PF00034 Cytochrome c JVX96_11960 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JVX96_11970 PF03741 Integral membrane protein TerC family JVX96_11970 PF03471 Transporter associated domain JVX96_11975 PF01613 Flavin reductase like domain JVX96_11995 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase JVX96_12000 PF00535 Glycosyl transferase family 2 JVX96_12005 PF01569 PAP2 superfamily JVX96_12025 PF00171 Aldehyde dehydrogenase family JVX96_12025 PF01575 MaoC like domain JVX96_12030 PF00005 ABC transporter JVX96_12035 PF00005 ABC transporter JVX96_12050 PF00970 Oxidoreductase FAD-binding domain JVX96_12050 PF00111 2Fe-2S iron-sulfur cluster binding domain JVX96_12050 PF00175 Oxidoreductase NAD-binding domain JVX96_12055 PF01883 Iron-sulfur cluster assembly protein JVX96_12060 PF05138 Phenylacetic acid catabolic protein JVX96_12065 PF06243 Phenylacetic acid degradation B JVX96_12070 PF05138 Phenylacetic acid catabolic protein JVX96_12075 PF14535 AMP-binding enzyme C-terminal domain JVX96_12075 PF00501 AMP-binding enzyme JVX96_12080 PF03061 Thioesterase superfamily JVX96_12085 PF00378 Enoyl-CoA hydratase/isomerase JVX96_12090 PF00132 Bacterial transferase hexapeptide (six repeats) JVX96_12095 PF00440 Bacterial regulatory proteins, tetR family JVX96_12105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_12105 PF03466 LysR substrate binding domain JVX96_12110 PF00497 Bacterial extracellular solute-binding proteins, family 3 JVX96_12120 PF07584 Aerotolerance regulator N-terminal JVX96_12120 PF13519 von Willebrand factor type A domain JVX96_12125 PF01882 Protein of unknown function DUF58 JVX96_12130 PF17863 AAA lid domain JVX96_12130 PF07726 ATPase family associated with various cellular activities (AAA) JVX96_12135 PF00595 PDZ domain JVX96_12140 PF01026 TatD related DNase JVX96_12160 PF00437 Type II/IV secretion system protein JVX96_12160 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain JVX96_12170 PF01970 Tripartite tricarboxylate transporter TctA family JVX96_12180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_12180 PF03466 LysR substrate binding domain JVX96_12185 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_12200 PF00106 short chain dehydrogenase JVX96_12210 PF00107 Zinc-binding dehydrogenase JVX96_12210 PF08240 Alcohol dehydrogenase GroES-like domain JVX96_12220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_12220 PF03466 LysR substrate binding domain JVX96_12225 PF13593 SBF-like CPA transporter family (DUF4137) JVX96_12230 PF02690 Na+/Pi-cotransporter JVX96_12235 PF00149 Calcineurin-like phosphoesterase JVX96_12240 PF00005 ABC transporter JVX96_12240 PF08402 TOBE domain JVX96_12245 PF00528 Binding-protein-dependent transport system inner membrane component JVX96_12250 PF00528 Binding-protein-dependent transport system inner membrane component JVX96_12260 PF00356 Bacterial regulatory proteins, lacI family JVX96_12265 PF01252 Signal peptidase (SPase) II JVX96_12270 PF00133 tRNA synthetases class I (I, L, M and V) JVX96_12270 PF08264 Anticodon-binding domain of tRNA JVX96_12270 PF06827 Zinc finger found in FPG and IleRS JVX96_12275 PF06574 FAD synthetase JVX96_12275 PF01687 Riboflavin kinase JVX96_12285 PF00378 Enoyl-CoA hydratase/isomerase JVX96_12295 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JVX96_12295 PF02770 Acyl-CoA dehydrogenase, middle domain JVX96_12295 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JVX96_12300 PF02770 Acyl-CoA dehydrogenase, middle domain JVX96_12300 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JVX96_12300 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JVX96_12305 PF00551 Formyl transferase JVX96_12325 PF01189 16S rRNA methyltransferase RsmB/F JVX96_12325 PF01029 NusB family JVX96_12335 PF00471 Ribosomal protein L33 JVX96_12340 PF00830 Ribosomal L28 family JVX96_12345 PF07992 Pyridine nucleotide-disulphide oxidoreductase JVX96_12350 PF00027 Cyclic nucleotide-binding domain JVX96_12350 PF13545 Crp-like helix-turn-helix domain JVX96_12355 PF13491 4TM region of DNA translocase FtsK/SpoIIIE JVX96_12355 PF17854 FtsK alpha domain JVX96_12355 PF01580 FtsK/SpoIIIE family JVX96_12355 PF09397 Ftsk gamma domain JVX96_12360 PF03548 Outer membrane lipoprotein carrier protein LolA JVX96_12365 PF00004 ATPase family associated with various cellular activities (AAA) JVX96_12365 PF12002 MgsA AAA+ ATPase C terminal JVX96_12365 PF16193 AAA C-terminal domain JVX96_12370 PF02653 Branched-chain amino acid transport system / permease component JVX96_12375 PF11862 Domain of unknown function (DUF3382) JVX96_12375 PF02653 Branched-chain amino acid transport system / permease component JVX96_12380 PF12399 Branched-chain amino acid ATP-binding cassette transporter JVX96_12380 PF00005 ABC transporter JVX96_12385 PF00005 ABC transporter JVX96_12390 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_12395 PF00175 Oxidoreductase NAD-binding domain JVX96_12395 PF00970 Oxidoreductase FAD-binding domain JVX96_12395 PF00111 2Fe-2S iron-sulfur cluster binding domain JVX96_12400 PF01370 NAD dependent epimerase/dehydratase family JVX96_12410 PF00291 Pyridoxal-phosphate dependent enzyme JVX96_12415 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain JVX96_12415 PF00293 NUDIX domain JVX96_12415 PF09297 NADH pyrophosphatase zinc ribbon domain JVX96_12420 PF01206 Sulfurtransferase TusA JVX96_12425 PF00483 Nucleotidyl transferase JVX96_12430 PF10458 Valyl tRNA synthetase tRNA binding arm JVX96_12430 PF00133 tRNA synthetases class I (I, L, M and V) JVX96_12430 PF08264 Anticodon-binding domain of tRNA JVX96_12435 PF03883 Peroxide stress protein YaaA JVX96_12445 PF00561 alpha/beta hydrolase fold JVX96_12450 PF14489 QueF-like protein JVX96_12450 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term JVX96_12455 PF00106 short chain dehydrogenase JVX96_12465 PF03466 LysR substrate binding domain JVX96_12465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_12470 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JVX96_12470 PF13378 Enolase C-terminal domain-like JVX96_12475 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_12480 PF17645 Arylmalonate decarboxylase JVX96_12490 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JVX96_12490 PF02770 Acyl-CoA dehydrogenase, middle domain JVX96_12490 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JVX96_12500 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JVX96_12500 PF02770 Acyl-CoA dehydrogenase, middle domain JVX96_12500 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JVX96_12505 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_12510 PF13193 AMP-binding enzyme C-terminal domain JVX96_12510 PF00501 AMP-binding enzyme JVX96_12540 PF00817 impB/mucB/samB family JVX96_12540 PF11799 impB/mucB/samB family C-terminal domain JVX96_12540 PF11798 IMS family HHH motif JVX96_12545 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family JVX96_12555 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_12560 PF03466 LysR substrate binding domain JVX96_12560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_12565 PF07519 Tannase and feruloyl esterase JVX96_12575 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_12580 PF00392 Bacterial regulatory proteins, gntR family JVX96_12580 PF07729 FCD domain JVX96_12585 PF13609 Gram-negative porin JVX96_12595 PF00005 ABC transporter JVX96_12600 PF02653 Branched-chain amino acid transport system / permease component JVX96_12610 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JVX96_12610 PF13378 Enolase C-terminal domain-like JVX96_12630 PF00083 Sugar (and other) transporter JVX96_12635 PF01070 FMN-dependent dehydrogenase JVX96_12640 PF03466 LysR substrate binding domain JVX96_12640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_12655 PF02560 Cyanate lyase C-terminal domain JVX96_12660 PF00106 short chain dehydrogenase JVX96_12670 PF12146 Serine aminopeptidase, S33 JVX96_12680 PF00196 Bacterial regulatory proteins, luxR family JVX96_12690 PF03971 Monomeric isocitrate dehydrogenase JVX96_12695 PF00005 ABC transporter JVX96_12705 PF07690 Major Facilitator Superfamily JVX96_12710 PF07729 FCD domain JVX96_12710 PF00392 Bacterial regulatory proteins, gntR family JVX96_12715 PF03466 LysR substrate binding domain JVX96_12720 PF04536 TPM domain JVX96_12725 PF00912 Transglycosylase JVX96_12725 PF00905 Penicillin binding protein transpeptidase domain JVX96_12735 PF01810 LysE type translocator JVX96_12750 PF13508 Acetyltransferase (GNAT) domain JVX96_12750 PF00583 Acetyltransferase (GNAT) family JVX96_12755 PF01425 Amidase JVX96_12765 PF00083 Sugar (and other) transporter JVX96_12775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_12780 PF00144 Beta-lactamase JVX96_12785 PF00905 Penicillin binding protein transpeptidase domain JVX96_12800 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JVX96_12830 PF04545 Sigma-70, region 4 JVX96_12830 PF04542 Sigma-70 region 2 JVX96_12850 PF02321 Outer membrane efflux protein JVX96_12855 PF00873 AcrB/AcrD/AcrF family JVX96_12860 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JVX96_12860 PF00529 HlyD membrane-fusion protein of T1SS JVX96_12875 PF00206 Lyase JVX96_12875 PF14698 Argininosuccinate lyase C-terminal JVX96_12885 PF04397 LytTr DNA-binding domain JVX96_12885 PF00072 Response regulator receiver domain JVX96_12890 PF01594 AI-2E family transporter JVX96_12900 PF03466 LysR substrate binding domain JVX96_12900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_12905 PF07690 Major Facilitator Superfamily JVX96_12920 PF10091 Putative glucoamylase JVX96_12920 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain JVX96_12920 PF06165 Glycosyltransferase family 36 JVX96_12930 PF00311 Phosphoenolpyruvate carboxylase JVX96_12935 PF03900 Porphobilinogen deaminase, C-terminal domain JVX96_12935 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain JVX96_12955 PF10150 Ribonuclease E/G family JVX96_12955 PF00575 S1 RNA binding domain JVX96_12955 PF12111 Polyribonucleotide phosphorylase C terminal JVX96_12960 PF01479 S4 domain JVX96_12960 PF00849 RNA pseudouridylate synthase JVX96_12965 PF13419 Haloacid dehalogenase-like hydrolase JVX96_12975 PF06965 Na+/H+ antiporter 1 JVX96_12975 PF01343 Peptidase family S49 JVX96_12980 PF07690 Major Facilitator Superfamily JVX96_12985 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JVX96_12990 PF02545 Maf-like protein JVX96_12995 PF02620 Large ribosomal RNA subunit accumulation protein YceD JVX96_13000 PF01783 Ribosomal L32p protein family JVX96_13005 PF02504 Fatty acid synthesis protein JVX96_13010 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JVX96_13010 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JVX96_13015 PF00698 Acyl transferase domain JVX96_13025 PF00550 Phosphopantetheine attachment site JVX96_13030 PF02801 Beta-ketoacyl synthase, C-terminal domain JVX96_13030 PF00109 Beta-ketoacyl synthase, N-terminal domain JVX96_13040 PF04542 Sigma-70 region 2 JVX96_13040 PF08281 Sigma-70, region 4 JVX96_13055 PF13180 PDZ domain JVX96_13060 PF00679 Elongation factor G C-terminus JVX96_13060 PF03144 Elongation factor Tu domain 2 JVX96_13060 PF00009 Elongation factor Tu GTP binding domain JVX96_13060 PF06421 GTP-binding protein LepA C-terminus JVX96_13065 PF10502 Signal peptidase, peptidase S26 JVX96_13075 PF14622 Ribonuclease-III-like JVX96_13075 PF00035 Double-stranded RNA binding motif JVX96_13080 PF07650 KH domain JVX96_13080 PF01926 50S ribosome-binding GTPase JVX96_13085 PF02565 Recombination protein O C terminal JVX96_13085 PF11967 Recombination protein O N terminal JVX96_13090 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ JVX96_13095 PF01648 4'-phosphopantetheinyl transferase superfamily JVX96_13100 PF00933 Glycosyl hydrolase family 3 N terminal domain JVX96_13105 PF01863 Protein of unknown function DUF45 JVX96_13110 PF00012 Hsp70 protein JVX96_13115 PF01336 OB-fold nucleic acid binding domain JVX96_13115 PF00152 tRNA synthetases class II (D, K and N) JVX96_13125 PF02325 YGGT family JVX96_13130 PF17848 Acetyl-coA carboxylase zinc finger domain JVX96_13130 PF01039 Carboxyl transferase domain JVX96_13135 PF00290 Tryptophan synthase alpha chain JVX96_13140 PF00291 Pyridoxal-phosphate dependent enzyme JVX96_13145 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase JVX96_13150 PF01416 tRNA pseudouridine synthase JVX96_13160 PF02774 Semialdehyde dehydrogenase, dimerisation domain JVX96_13160 PF01118 Semialdehyde dehydrogenase, NAD binding domain JVX96_13165 PF00180 Isocitrate/isopropylmalate dehydrogenase JVX96_13170 PF00694 Aconitase C-terminal domain JVX96_13175 PF00330 Aconitase family (aconitate hydratase) JVX96_13180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_13180 PF03466 LysR substrate binding domain JVX96_13185 PF00285 Citrate synthase, C-terminal domain JVX96_13190 PF03937 Flavinator of succinate dehydrogenase JVX96_13195 PF13085 2Fe-2S iron-sulfur cluster binding domain JVX96_13200 PF02910 Fumarate reductase flavoprotein C-term JVX96_13200 PF00890 FAD binding domain JVX96_13215 PF07702 UTRA domain JVX96_13215 PF00392 Bacterial regulatory proteins, gntR family JVX96_13220 PF00056 lactate/malate dehydrogenase, NAD binding domain JVX96_13220 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JVX96_13240 PF11791 Aconitate B N-terminal domain JVX96_13240 PF06434 Aconitate hydratase 2 N-terminus JVX96_13240 PF00330 Aconitase family (aconitate hydratase) JVX96_13245 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JVX96_13245 PF02770 Acyl-CoA dehydrogenase, middle domain JVX96_13245 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JVX96_13245 PF09317 Domain of unknown function (DUF1974) JVX96_13260 PF00330 Aconitase family (aconitate hydratase) JVX96_13260 PF00694 Aconitase C-terminal domain JVX96_13270 PF03239 Iron permease FTR1 family JVX96_13280 PF04261 Dyp-type peroxidase family JVX96_13285 PF13473 Cupredoxin-like domain JVX96_13285 PF09375 Imelysin JVX96_13295 PF02421 Ferrous iron transport protein B JVX96_13295 PF07664 Ferrous iron transport protein B C terminus JVX96_13295 PF07670 Nucleoside recognition JVX96_13305 PF01494 FAD binding domain JVX96_13315 PF03301 Tryptophan 2,3-dioxygenase JVX96_13320 PF00266 Aminotransferase class-V JVX96_13325 PF04199 Putative cyclase JVX96_13340 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JVX96_13340 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JVX96_13345 PF00202 Aminotransferase class-III JVX96_13355 PF01649 Ribosomal protein S20 JVX96_13360 PF03023 Lipid II flippase MurJ JVX96_13365 PF13369 Transglutaminase-like superfamily JVX96_13375 PF03795 YCII-related domain JVX96_13380 PF04542 Sigma-70 region 2 JVX96_13380 PF08281 Sigma-70, region 4 JVX96_13385 PF12833 Helix-turn-helix domain JVX96_13385 PF02311 AraC-like ligand binding domain JVX96_13405 PF02769 AIR synthase related protein, C-terminal domain JVX96_13405 PF00586 AIR synthase related protein, N-terminal domain JVX96_13410 PF00308 Bacterial dnaA protein JVX96_13415 PF12627 Probable RNA and SrmB- binding site of polymerase A JVX96_13415 PF12626 Polymerase A arginine-rich C-terminus JVX96_13415 PF01743 Poly A polymerase head domain JVX96_13420 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) JVX96_13425 PF03458 UPF0126 domain JVX96_13430 PF01865 Protein of unknown function DUF47 JVX96_13435 PF01384 Phosphate transporter family JVX96_13450 PF00886 Ribosomal protein S16 JVX96_13455 PF01782 RimM N-terminal domain JVX96_13455 PF05239 PRC-barrel domain JVX96_13460 PF01746 tRNA (Guanine-1)-methyltransferase JVX96_13465 PF01245 Ribosomal protein L19 JVX96_13470 PF00293 NUDIX domain JVX96_13475 PF17113 Regulatory signalling modulator protein AmpE JVX96_13475 PF03186 CobD/Cbib protein JVX96_13480 PF00155 Aminotransferase class I and II JVX96_13490 PF03193 RsgA GTPase JVX96_13495 PF01329 Pterin 4 alpha carbinolamine dehydratase JVX96_13500 PF01435 Peptidase family M48 JVX96_13505 PF00929 Exonuclease JVX96_13510 PF00270 DEAD/DEAH box helicase JVX96_13510 PF00271 Helicase conserved C-terminal domain JVX96_13520 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain JVX96_13520 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JVX96_13520 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JVX96_13525 PF00561 alpha/beta hydrolase fold JVX96_13530 PF00107 Zinc-binding dehydrogenase JVX96_13530 PF08240 Alcohol dehydrogenase GroES-like domain JVX96_13550 PF00175 Oxidoreductase NAD-binding domain JVX96_13550 PF00111 2Fe-2S iron-sulfur cluster binding domain JVX96_13555 PF00355 Rieske [2Fe-2S] domain JVX96_13555 PF00848 Ring hydroxylating alpha subunit (catalytic domain) JVX96_13565 PF13193 AMP-binding enzyme C-terminal domain JVX96_13565 PF00501 AMP-binding enzyme JVX96_13580 PF04199 Putative cyclase JVX96_13590 PF13458 Periplasmic binding protein JVX96_13595 PF13458 Periplasmic binding protein JVX96_13600 PF00355 Rieske [2Fe-2S] domain JVX96_13600 PF00848 Ring hydroxylating alpha subunit (catalytic domain) JVX96_13615 PF02653 Branched-chain amino acid transport system / permease component JVX96_13620 PF00005 ABC transporter JVX96_13620 PF12399 Branched-chain amino acid ATP-binding cassette transporter JVX96_13625 PF00005 ABC transporter JVX96_13630 PF00501 AMP-binding enzyme JVX96_13630 PF13193 AMP-binding enzyme C-terminal domain JVX96_13640 PF00106 short chain dehydrogenase JVX96_13690 PF00486 Transcriptional regulatory protein, C terminal JVX96_13690 PF00072 Response regulator receiver domain JVX96_13705 PF00106 short chain dehydrogenase JVX96_13715 PF07859 alpha/beta hydrolase fold JVX96_13720 PF00478 IMP dehydrogenase / GMP reductase domain JVX96_13725 PF00580 UvrD/REP helicase N-terminal domain JVX96_13725 PF13361 UvrD-like helicase C-terminal domain JVX96_13745 PF01636 Phosphotransferase enzyme family JVX96_13755 PF01367 5'-3' exonuclease, C-terminal SAM fold JVX96_13755 PF00476 DNA polymerase family A JVX96_13755 PF01612 3'-5' exonuclease JVX96_13755 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain JVX96_13760 PF01546 Peptidase family M20/M25/M40 JVX96_13760 PF07687 Peptidase dimerisation domain JVX96_13765 PF03466 LysR substrate binding domain JVX96_13765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_13770 PF01266 FAD dependent oxidoreductase JVX96_13775 PF00497 Bacterial extracellular solute-binding proteins, family 3 JVX96_13785 PF01738 Dienelactone hydrolase family JVX96_13800 PF07969 Amidohydrolase family JVX96_13805 PF00005 ABC transporter JVX96_13805 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JVX96_13810 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JVX96_13810 PF00005 ABC transporter JVX96_13815 PF00528 Binding-protein-dependent transport system inner membrane component JVX96_13820 PF00528 Binding-protein-dependent transport system inner membrane component JVX96_13825 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JVX96_13830 PF07364 Metallopeptidase family M81 JVX96_13830 PF07171 MlrC C-terminus JVX96_13835 PF01266 FAD dependent oxidoreductase JVX96_13840 PF07883 Cupin domain JVX96_13840 PF01381 Helix-turn-helix JVX96_13845 PF07687 Peptidase dimerisation domain JVX96_13845 PF01546 Peptidase family M20/M25/M40 JVX96_13850 PF11737 Protein of unknown function (DUF3300) JVX96_13865 PF00005 ABC transporter JVX96_13875 PF00581 Rhodanese-like domain JVX96_13890 PF02609 Exonuclease VII small subunit JVX96_13895 PF00348 Polyprenyl synthetase JVX96_13900 PF13292 1-deoxy-D-xylulose-5-phosphate synthase JVX96_13900 PF02780 Transketolase, C-terminal domain JVX96_13900 PF02779 Transketolase, pyrimidine binding domain JVX96_13905 PF00005 ABC transporter JVX96_13910 PF12399 Branched-chain amino acid ATP-binding cassette transporter JVX96_13910 PF00005 ABC transporter JVX96_13915 PF11862 Domain of unknown function (DUF3382) JVX96_13915 PF02653 Branched-chain amino acid transport system / permease component JVX96_13920 PF02653 Branched-chain amino acid transport system / permease component JVX96_13925 PF13458 Periplasmic binding protein JVX96_13930 PF03480 Bacterial extracellular solute-binding protein, family 7 JVX96_13935 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component JVX96_13950 PF00083 Sugar (and other) transporter JVX96_13955 PF00202 Aminotransferase class-III JVX96_13960 PF03466 LysR substrate binding domain JVX96_13960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_13965 PF00392 Bacterial regulatory proteins, gntR family JVX96_13965 PF07702 UTRA domain JVX96_13975 PF02653 Branched-chain amino acid transport system / permease component JVX96_13980 PF11862 Domain of unknown function (DUF3382) JVX96_13980 PF02653 Branched-chain amino acid transport system / permease component JVX96_13985 PF00005 ABC transporter JVX96_13990 PF00005 ABC transporter JVX96_13995 PF07687 Peptidase dimerisation domain JVX96_13995 PF01546 Peptidase family M20/M25/M40 JVX96_14000 PF07364 Metallopeptidase family M81 JVX96_14000 PF07171 MlrC C-terminus JVX96_14010 PF02954 Bacterial regulatory protein, Fis family JVX96_14010 PF01590 GAF domain JVX96_14015 PF01799 [2Fe-2S] binding domain JVX96_14015 PF00111 2Fe-2S iron-sulfur cluster binding domain JVX96_14020 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain JVX96_14020 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase JVX96_14030 PF00004 ATPase family associated with various cellular activities (AAA) JVX96_14030 PF05362 Lon protease (S16) C-terminal proteolytic domain JVX96_14030 PF02190 ATP-dependent protease La (LON) substrate-binding domain JVX96_14045 PF13478 XdhC Rossmann domain JVX96_14045 PF02625 XdhC and CoxI family JVX96_14050 PF03334 Na+/H+ antiporter subunit JVX96_14055 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) JVX96_14065 PF00361 Proton-conducting membrane transporter JVX96_14070 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L JVX96_14075 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter JVX96_14075 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus JVX96_14075 PF13244 Domain of unknown function (DUF4040) JVX96_14075 PF00361 Proton-conducting membrane transporter JVX96_14080 PF02537 CrcB-like protein, Camphor Resistance (CrcB) JVX96_14090 PF18073 Rubredoxin metal binding domain JVX96_14100 PF00216 Bacterial DNA-binding protein JVX96_14105 PF00575 S1 RNA binding domain JVX96_14110 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JVX96_14115 PF02153 Prephenate dehydrogenase JVX96_14115 PF01842 ACT domain JVX96_14120 PF01842 ACT domain JVX96_14120 PF01817 Chorismate mutase type II JVX96_14120 PF00800 Prephenate dehydratase JVX96_14125 PF00266 Aminotransferase class-V JVX96_14135 PF00521 DNA gyrase/topoisomerase IV, subunit A JVX96_14135 PF03989 DNA gyrase C-terminal domain, beta-propeller JVX96_14140 PF00691 OmpA family JVX96_14150 PF13419 Haloacid dehalogenase-like hydrolase JVX96_14160 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain JVX96_14160 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JVX96_14165 PF00171 Aldehyde dehydrogenase family JVX96_14170 PF01425 Amidase JVX96_14175 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JVX96_14180 PF00005 ABC transporter JVX96_14180 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JVX96_14185 PF00005 ABC transporter JVX96_14185 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JVX96_14190 PF12911 N-terminal TM domain of oligopeptide transport permease C JVX96_14190 PF00528 Binding-protein-dependent transport system inner membrane component JVX96_14195 PF00528 Binding-protein-dependent transport system inner membrane component JVX96_14200 PF00180 Isocitrate/isopropylmalate dehydrogenase JVX96_14205 PF00512 His Kinase A (phospho-acceptor) domain JVX96_14205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JVX96_14210 PF00248 Aldo/keto reductase family JVX96_14215 PF00860 Permease family JVX96_14220 PF16363 GDP-mannose 4,6 dehydratase JVX96_14235 PF01177 Asp/Glu/Hydantoin racemase JVX96_14240 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin JVX96_14245 PF00486 Transcriptional regulatory protein, C terminal JVX96_14245 PF00072 Response regulator receiver domain JVX96_14250 PF00512 His Kinase A (phospho-acceptor) domain JVX96_14250 PF00672 HAMP domain JVX96_14250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JVX96_14265 PF02321 Outer membrane efflux protein JVX96_14270 PF00664 ABC transporter transmembrane region JVX96_14270 PF03412 Peptidase C39 family JVX96_14270 PF00005 ABC transporter JVX96_14285 PF05247 Flagellar transcriptional activator (FlhD) JVX96_14310 PF00149 Calcineurin-like phosphoesterase JVX96_14315 PF04235 Protein of unknown function (DUF418) JVX96_14350 PF01648 4'-phosphopantetheinyl transferase superfamily JVX96_14355 PF02798 Glutathione S-transferase, N-terminal domain JVX96_14375 PF03435 Saccharopine dehydrogenase NADP binding domain JVX96_14380 PF00501 AMP-binding enzyme JVX96_14380 PF13193 AMP-binding enzyme C-terminal domain JVX96_14385 PF13193 AMP-binding enzyme C-terminal domain JVX96_14385 PF00501 AMP-binding enzyme JVX96_14400 PF00892 EamA-like transporter family JVX96_14405 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain JVX96_14405 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain JVX96_14410 PF12833 Helix-turn-helix domain JVX96_14410 PF02805 Metal binding domain of Ada JVX96_14415 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JVX96_14415 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JVX96_14415 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JVX96_14415 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JVX96_14420 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) JVX96_14420 PF00534 Glycosyl transferases group 1 JVX96_14440 PF17922 Tetracyclin repressor-like, C-terminal domain JVX96_14440 PF00440 Bacterial regulatory proteins, tetR family JVX96_14445 PF01625 Peptide methionine sulfoxide reductase JVX96_14475 PF01243 Pyridoxamine 5'-phosphate oxidase JVX96_14475 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region JVX96_14480 PF00132 Bacterial transferase hexapeptide (six repeats) JVX96_14480 PF12804 MobA-like NTP transferase domain JVX96_14480 PF14602 Hexapeptide repeat of succinyl-transferase JVX96_14500 PF00920 Dehydratase family JVX96_14505 PF01081 KDPG and KHG aldolase JVX96_14520 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JVX96_14530 PF17845 FbpC C-terminal regulatory nucleotide binding domain JVX96_14530 PF00005 ABC transporter JVX96_14540 PF13416 Bacterial extracellular solute-binding protein JVX96_14575 PF00596 Class II Aldolase and Adducin N-terminal domain JVX96_14580 PF01081 KDPG and KHG aldolase JVX96_14590 PF00920 Dehydratase family JVX96_14595 PF07729 FCD domain JVX96_14595 PF00392 Bacterial regulatory proteins, gntR family JVX96_14605 PF00528 Binding-protein-dependent transport system inner membrane component JVX96_14610 PF00528 Binding-protein-dependent transport system inner membrane component JVX96_14615 PF03459 TOBE domain JVX96_14615 PF00005 ABC transporter JVX96_14615 PF17912 MalK OB fold domain JVX96_14625 PF00270 DEAD/DEAH box helicase JVX96_14625 PF00271 Helicase conserved C-terminal domain JVX96_14630 PF12848 ABC transporter JVX96_14630 PF00005 ABC transporter JVX96_14635 PF02627 Carboxymuconolactone decarboxylase family JVX96_14640 PF13411 MerR HTH family regulatory protein JVX96_14650 PF03576 Peptidase family S58 JVX96_14655 PF01266 FAD dependent oxidoreductase JVX96_14675 PF00394 Multicopper oxidase JVX96_14675 PF07731 Multicopper oxidase JVX96_14675 PF07732 Multicopper oxidase JVX96_14695 PF03009 Glycerophosphoryl diester phosphodiesterase family JVX96_14705 PF00072 Response regulator receiver domain JVX96_14705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JVX96_14705 PF13426 PAS domain JVX96_14710 PF00583 Acetyltransferase (GNAT) family JVX96_14720 PF00005 ABC transporter JVX96_14725 PF00528 Binding-protein-dependent transport system inner membrane component JVX96_14730 PF00528 Binding-protein-dependent transport system inner membrane component JVX96_14735 PF00497 Bacterial extracellular solute-binding proteins, family 3 JVX96_14745 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_14750 PF02566 OsmC-like protein JVX96_14755 PF13193 AMP-binding enzyme C-terminal domain JVX96_14755 PF00501 AMP-binding enzyme JVX96_14765 PF00565 Staphylococcal nuclease homologue JVX96_14770 PF07992 Pyridine nucleotide-disulphide oxidoreductase JVX96_14775 PF03781 Sulfatase-modifying factor enzyme 1 JVX96_14775 PF12867 DinB superfamily JVX96_14780 PF10017 Histidine-specific methyltransferase, SAM-dependent JVX96_14795 PF00582 Universal stress protein family JVX96_14800 PF00849 RNA pseudouridylate synthase JVX96_14810 PF00111 2Fe-2S iron-sulfur cluster binding domain JVX96_14815 PF09905 DNA-binding protein VF530 JVX96_14835 PF05661 Protein of unknown function (DUF808) JVX96_14860 PF00378 Enoyl-CoA hydratase/isomerase JVX96_14870 PF07690 Major Facilitator Superfamily JVX96_14875 PF03466 LysR substrate binding domain JVX96_14875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_14900 PF02492 CobW/HypB/UreG, nucleotide-binding domain JVX96_14900 PF07683 Cobalamin synthesis protein cobW C-terminal domain JVX96_14910 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_14920 PF02230 Phospholipase/Carboxylesterase JVX96_14930 PF04262 Glutamate-cysteine ligase JVX96_14935 PF00072 Response regulator receiver domain JVX96_14935 PF01339 CheB methylesterase JVX96_14940 PF00106 short chain dehydrogenase JVX96_14950 PF13411 MerR HTH family regulatory protein JVX96_14960 PF01743 Poly A polymerase head domain JVX96_14960 PF00571 CBS domain JVX96_14965 PF01926 50S ribosome-binding GTPase JVX96_14995 PF00909 Ammonium Transporter Family JVX96_15025 PF00849 RNA pseudouridylate synthase JVX96_15035 PF00749 tRNA synthetases class I (E and Q), catalytic domain JVX96_15035 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain JVX96_15045 PF04397 LytTr DNA-binding domain JVX96_15045 PF00072 Response regulator receiver domain JVX96_15050 PF07694 5TMR of 5TMR-LYT JVX96_15050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JVX96_15050 PF06580 Histidine kinase JVX96_15060 PF04116 Fatty acid hydroxylase superfamily JVX96_15070 PF13533 Biotin-lipoyl like JVX96_15075 PF00873 AcrB/AcrD/AcrF family JVX96_15080 PF00873 AcrB/AcrD/AcrF family JVX96_15085 PF02321 Outer membrane efflux protein JVX96_15095 PF07729 FCD domain JVX96_15095 PF00392 Bacterial regulatory proteins, gntR family JVX96_15100 PF01380 SIS domain JVX96_15100 PF01418 Helix-turn-helix domain, rpiR family JVX96_15105 PF00202 Aminotransferase class-III JVX96_15110 PF00497 Bacterial extracellular solute-binding proteins, family 3 JVX96_15125 PF02673 Bacitracin resistance protein BacA JVX96_15130 PF07730 Histidine kinase JVX96_15130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JVX96_15130 PF00672 HAMP domain JVX96_15135 PF00196 Bacterial regulatory proteins, luxR family JVX96_15135 PF00072 Response regulator receiver domain JVX96_15140 PF00583 Acetyltransferase (GNAT) family JVX96_15150 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JVX96_15155 PF00528 Binding-protein-dependent transport system inner membrane component JVX96_15160 PF12911 N-terminal TM domain of oligopeptide transport permease C JVX96_15160 PF00528 Binding-protein-dependent transport system inner membrane component JVX96_15165 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JVX96_15165 PF00005 ABC transporter JVX96_15180 PF01425 Amidase JVX96_15195 PF05190 MutS family domain IV JVX96_15195 PF00488 MutS domain V JVX96_15195 PF05188 MutS domain II JVX96_15195 PF01624 MutS domain I JVX96_15195 PF05192 MutS domain III JVX96_15200 PF00990 Diguanylate cyclase, GGDEF domain JVX96_15200 PF01590 GAF domain JVX96_15200 PF00563 EAL domain JVX96_15200 PF00360 Phytochrome region JVX96_15205 PF01544 CorA-like Mg2+ transporter protein JVX96_15215 PF07690 Major Facilitator Superfamily JVX96_15220 PF04954 Siderophore-interacting protein JVX96_15220 PF08021 Siderophore-interacting FAD-binding domain JVX96_15230 PF01494 FAD binding domain JVX96_15240 PF00593 TonB dependent receptor JVX96_15240 PF07660 Secretin and TonB N terminus short domain JVX96_15240 PF07715 TonB-dependent Receptor Plug Domain JVX96_15250 PF04542 Sigma-70 region 2 JVX96_15250 PF08281 Sigma-70, region 4 JVX96_15285 PF00580 UvrD/REP helicase N-terminal domain JVX96_15285 PF12705 PD-(D/E)XK nuclease superfamily JVX96_15285 PF13361 UvrD-like helicase C-terminal domain JVX96_15300 PF00884 Sulfatase JVX96_15310 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_15315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_15315 PF03466 LysR substrate binding domain JVX96_15320 PF04235 Protein of unknown function (DUF418) JVX96_15330 PF12805 FUSC-like inner membrane protein yccS JVX96_15335 PF00459 Inositol monophosphatase family JVX96_15340 PF00588 SpoU rRNA Methylase family JVX96_15345 PF00132 Bacterial transferase hexapeptide (six repeats) JVX96_15350 PF13411 MerR HTH family regulatory protein JVX96_15355 PF00403 Heavy-metal-associated domain JVX96_15360 PF00999 Sodium/hydrogen exchanger family JVX96_15365 PF00512 His Kinase A (phospho-acceptor) domain JVX96_15365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JVX96_15365 PF00672 HAMP domain JVX96_15370 PF00072 Response regulator receiver domain JVX96_15370 PF00486 Transcriptional regulatory protein, C terminal JVX96_15380 PF02321 Outer membrane efflux protein JVX96_15385 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JVX96_15385 PF00529 HlyD membrane-fusion protein of T1SS JVX96_15390 PF00873 AcrB/AcrD/AcrF family JVX96_15395 PF00141 Peroxidase JVX96_15405 PF00994 Probable molybdopterin binding domain JVX96_15410 PF04751 Protein of unknown function (DUF615) JVX96_15415 PF01523 Putative modulator of DNA gyrase JVX96_15430 PF00293 NUDIX domain JVX96_15440 PF01165 Ribosomal protein S21 JVX96_15450 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family JVX96_15465 PF00005 ABC transporter JVX96_15465 PF00664 ABC transporter transmembrane region JVX96_15465 PF03412 Peptidase C39 family JVX96_15485 PF00528 Binding-protein-dependent transport system inner membrane component JVX96_15490 PF00528 Binding-protein-dependent transport system inner membrane component JVX96_15500 PF08402 TOBE domain JVX96_15500 PF00005 ABC transporter JVX96_15505 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JVX96_15510 PF02885 Glycosyl transferase family, helical bundle domain JVX96_15510 PF00591 Glycosyl transferase family, a/b domain JVX96_15515 PF01568 Molydopterin dinucleotide binding domain JVX96_15515 PF04324 BFD-like [2Fe-2S] binding domain JVX96_15515 PF00384 Molybdopterin oxidoreductase JVX96_15515 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JVX96_15520 PF00355 Rieske [2Fe-2S] domain JVX96_15525 PF18267 Rubredoxin NAD+ reductase C-terminal domain JVX96_15525 PF04324 BFD-like [2Fe-2S] binding domain JVX96_15525 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JVX96_15525 PF07992 Pyridine nucleotide-disulphide oxidoreductase JVX96_15525 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JVX96_15530 PF00069 Protein kinase domain JVX96_15530 PF03793 PASTA domain JVX96_15535 PF07690 Major Facilitator Superfamily JVX96_15540 PF00072 Response regulator receiver domain JVX96_15540 PF03861 ANTAR domain JVX96_15545 PF00005 ABC transporter JVX96_15550 PF00528 Binding-protein-dependent transport system inner membrane component JVX96_15560 PF08376 Nitrate and nitrite sensing JVX96_15560 PF03861 ANTAR domain JVX96_15565 PF00814 Glycoprotease family JVX96_15580 PF13458 Periplasmic binding protein JVX96_15585 PF00155 Aminotransferase class I and II JVX96_15590 PF00312 Ribosomal protein S15 JVX96_15595 PF00575 S1 RNA binding domain JVX96_15595 PF03725 3' exoribonuclease family, domain 2 JVX96_15595 PF01138 3' exoribonuclease family, domain 1 JVX96_15595 PF00013 KH domain JVX96_15595 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain JVX96_15600 PF00698 Acyl transferase domain JVX96_15600 PF00109 Beta-ketoacyl synthase, N-terminal domain JVX96_15600 PF00107 Zinc-binding dehydrogenase JVX96_15600 PF14765 Polyketide synthase dehydratase JVX96_15600 PF16197 Ketoacyl-synthetase C-terminal extension JVX96_15600 PF02801 Beta-ketoacyl synthase, C-terminal domain JVX96_15600 PF08240 Alcohol dehydrogenase GroES-like domain JVX96_15600 PF08659 KR domain JVX96_15600 PF00550 Phosphopantetheine attachment site JVX96_15605 PF00121 Triosephosphate isomerase JVX96_15610 PF03840 Preprotein translocase SecG subunit JVX96_15620 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 JVX96_15625 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit JVX96_15630 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit JVX96_15635 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit JVX96_15645 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit JVX96_15645 PF10531 SLBB domain JVX96_15645 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region JVX96_15650 PF00384 Molybdopterin oxidoreductase JVX96_15650 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region JVX96_15650 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal JVX96_15655 PF00146 NADH dehydrogenase JVX96_15660 PF12838 4Fe-4S dicluster domain JVX96_15665 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 JVX96_15670 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L JVX96_15675 PF00361 Proton-conducting membrane transporter JVX96_15675 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus JVX96_15680 PF00361 Proton-conducting membrane transporter JVX96_15680 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus JVX96_15685 PF00361 Proton-conducting membrane transporter JVX96_15695 PF00293 NUDIX domain JVX96_15705 PF00664 ABC transporter transmembrane region JVX96_15705 PF00005 ABC transporter JVX96_15710 PF01047 MarR family JVX96_15715 PF02321 Outer membrane efflux protein JVX96_15720 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JVX96_15720 PF00529 HlyD membrane-fusion protein of T1SS JVX96_15725 PF07690 Major Facilitator Superfamily JVX96_15735 PF12399 Branched-chain amino acid ATP-binding cassette transporter JVX96_15735 PF00005 ABC transporter JVX96_15740 PF09383 NIL domain JVX96_15740 PF00005 ABC transporter JVX96_15755 PF02653 Branched-chain amino acid transport system / permease component JVX96_15790 PF03747 ADP-ribosylglycohydrolase JVX96_15805 PF04542 Sigma-70 region 2 JVX96_15805 PF08281 Sigma-70, region 4 JVX96_15810 PF03795 YCII-related domain JVX96_15820 PF05721 Phytanoyl-CoA dioxygenase (PhyH) JVX96_15830 PF00291 Pyridoxal-phosphate dependent enzyme JVX96_15835 PF00005 ABC transporter JVX96_15850 PF08676 MutL C terminal dimerisation domain JVX96_15850 PF01119 DNA mismatch repair protein, C-terminal domain JVX96_15855 PF09335 SNARE associated Golgi protein JVX96_15865 PF01520 N-acetylmuramoyl-L-alanine amidase JVX96_15865 PF11741 AMIN domain JVX96_15870 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE JVX96_15875 PF08331 Domain of unknown function (DUF1730) JVX96_15880 PF03960 ArsC family JVX96_15890 PF00885 6,7-dimethyl-8-ribityllumazine synthase JVX96_15895 PF00593 TonB dependent receptor JVX96_15895 PF07715 TonB-dependent Receptor Plug Domain JVX96_15900 PF06224 Winged helix DNA-binding domain JVX96_15920 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JVX96_15920 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JVX96_15930 PF00005 ABC transporter JVX96_15935 PF09084 NMT1/THI5 like JVX96_15940 PF00528 Binding-protein-dependent transport system inner membrane component JVX96_15945 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_15950 PF17938 Tetracyclin repressor-like, C-terminal domain JVX96_15950 PF00440 Bacterial regulatory proteins, tetR family JVX96_15955 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JVX96_15955 PF00205 Thiamine pyrophosphate enzyme, central domain JVX96_15955 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JVX96_15965 PF12833 Helix-turn-helix domain JVX96_15965 PF12852 Cupin JVX96_15985 PF00463 Isocitrate lyase family JVX96_15990 PF02824 TGS domain JVX96_15990 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JVX96_15990 PF03129 Anticodon binding domain JVX96_15990 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JVX96_15995 PF00707 Translation initiation factor IF-3, C-terminal domain JVX96_15995 PF05198 Translation initiation factor IF-3, N-terminal domain JVX96_16000 PF01632 Ribosomal protein L35 JVX96_16005 PF00453 Ribosomal protein L20 JVX96_16010 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain JVX96_16010 PF01409 tRNA synthetases class II core domain (F) JVX96_16015 PF03483 B3/4 domain JVX96_16015 PF03484 tRNA synthetase B5 domain JVX96_16015 PF03147 Ferredoxin-fold anticodon binding domain JVX96_16015 PF01588 Putative tRNA binding domain JVX96_16015 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain JVX96_16020 PF00216 Bacterial DNA-binding protein JVX96_16070 PF03783 Curli production assembly/transport component CsgG JVX96_16095 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_16105 PF03352 Methyladenine glycosylase JVX96_16115 PF01556 DnaJ C terminal domain JVX96_16115 PF00226 DnaJ domain JVX96_16120 PF00300 Histidine phosphatase superfamily (branch 1) JVX96_16120 PF00106 short chain dehydrogenase JVX96_16125 PF01804 Penicillin amidase JVX96_16130 PF02798 Glutathione S-transferase, N-terminal domain JVX96_16130 PF00043 Glutathione S-transferase, C-terminal domain JVX96_16135 PF01066 CDP-alcohol phosphatidyltransferase JVX96_16140 PF00117 Glutamine amidotransferase class-I JVX96_16140 PF02540 NAD synthase JVX96_16140 PF00958 GMP synthase C terminal domain JVX96_16170 PF03466 LysR substrate binding domain JVX96_16170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_16175 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_16180 PF03737 Aldolase/RraA JVX96_16185 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JVX96_16185 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JVX96_16195 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_16200 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_16220 PF04909 Amidohydrolase JVX96_16225 PF03006 Haemolysin-III related JVX96_16240 PF01661 Macro domain JVX96_16245 PF03480 Bacterial extracellular solute-binding protein, family 7 JVX96_16245 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component JVX96_16250 PF11987 Translation-initiation factor 2 JVX96_16250 PF08364 Bacterial translation initiation factor IF-2 associated region JVX96_16250 PF04760 Translation initiation factor IF-2, N-terminal region JVX96_16250 PF00009 Elongation factor Tu GTP binding domain JVX96_16250 PF03144 Elongation factor Tu domain 2 JVX96_16260 PF00440 Bacterial regulatory proteins, tetR family JVX96_16270 PF00005 ABC transporter JVX96_16270 PF00664 ABC transporter transmembrane region JVX96_16285 PF00005 ABC transporter JVX96_16285 PF12399 Branched-chain amino acid ATP-binding cassette transporter JVX96_16290 PF00005 ABC transporter JVX96_16295 PF03466 LysR substrate binding domain JVX96_16295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_16300 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase JVX96_16320 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_16325 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_16340 PF00330 Aconitase family (aconitate hydratase) JVX96_16350 PF00920 Dehydratase family JVX96_16355 PF13609 Gram-negative porin JVX96_16360 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_16370 PF03466 LysR substrate binding domain JVX96_16370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_16395 PF07733 Bacterial DNA polymerase III alpha NTPase domain JVX96_16395 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JVX96_16395 PF14579 Helix-hairpin-helix motif JVX96_16395 PF02811 PHP domain JVX96_16420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_16420 PF03466 LysR substrate binding domain JVX96_16430 PF01425 Amidase JVX96_16435 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_16440 PF03466 LysR substrate binding domain JVX96_16440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_16530 PF08546 Ketopantoate reductase PanE/ApbA C terminal JVX96_16530 PF02558 Ketopantoate reductase PanE/ApbA JVX96_16535 PF01433 Peptidase family M1 domain JVX96_16535 PF11838 ERAP1-like C-terminal domain JVX96_16545 PF00497 Bacterial extracellular solute-binding proteins, family 3 JVX96_16545 PF01464 Transglycosylase SLT domain JVX96_16560 PF01590 GAF domain JVX96_16560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JVX96_16560 PF00512 His Kinase A (phospho-acceptor) domain JVX96_16560 PF08446 PAS fold JVX96_16560 PF00360 Phytochrome region JVX96_16565 PF00072 Response regulator receiver domain JVX96_16570 PF08448 PAS fold JVX96_16570 PF00072 Response regulator receiver domain JVX96_16570 PF00512 His Kinase A (phospho-acceptor) domain JVX96_16570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JVX96_16570 PF13188 PAS domain JVX96_16600 PF00072 Response regulator receiver domain JVX96_16605 PF01627 Hpt domain JVX96_16605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JVX96_16605 PF00072 Response regulator receiver domain JVX96_16605 PF00512 His Kinase A (phospho-acceptor) domain JVX96_16625 PF08402 TOBE domain JVX96_16625 PF00005 ABC transporter JVX96_16630 PF00005 ABC transporter JVX96_16635 PF03069 Acetamidase/Formamidase family JVX96_16650 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JVX96_16650 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JVX96_16665 PF14310 Fibronectin type III-like domain JVX96_16665 PF00933 Glycosyl hydrolase family 3 N terminal domain JVX96_16665 PF01915 Glycosyl hydrolase family 3 C-terminal domain JVX96_16670 PF00596 Class II Aldolase and Adducin N-terminal domain JVX96_16680 PF13545 Crp-like helix-turn-helix domain JVX96_16680 PF00027 Cyclic nucleotide-binding domain JVX96_16700 PF02390 Putative methyltransferase JVX96_16705 PF00749 tRNA synthetases class I (E and Q), catalytic domain JVX96_16710 PF01266 FAD dependent oxidoreductase JVX96_16710 PF05430 S-adenosyl-L-methionine-dependent methyltransferase JVX96_16715 PF03466 LysR substrate binding domain JVX96_16715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_16720 PF02678 Pirin JVX96_16720 PF17954 Quercetinase C-terminal cupin domain JVX96_16725 PF07681 DoxX JVX96_16730 PF03358 NADPH-dependent FMN reductase JVX96_16735 PF05726 Pirin C-terminal cupin domain JVX96_16735 PF02678 Pirin JVX96_16740 PF01970 Tripartite tricarboxylate transporter TctA family JVX96_16750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JVX96_16750 PF00512 His Kinase A (phospho-acceptor) domain JVX96_16755 PF00072 Response regulator receiver domain JVX96_16755 PF00486 Transcriptional regulatory protein, C terminal JVX96_16760 PF17773 UPF0176 acylphosphatase like domain JVX96_16760 PF00581 Rhodanese-like domain JVX96_16765 PF02811 PHP domain JVX96_16765 PF01336 OB-fold nucleic acid binding domain JVX96_16765 PF14579 Helix-hairpin-helix motif JVX96_16765 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JVX96_16765 PF07733 Bacterial DNA polymerase III alpha NTPase domain JVX96_16775 PF03717 Penicillin-binding Protein dimerisation domain JVX96_16775 PF00905 Penicillin binding protein transpeptidase domain JVX96_16785 PF02472 Biopolymer transport protein ExbD/TolR JVX96_16790 PF01618 MotA/TolQ/ExbB proton channel family JVX96_16795 PF03061 Thioesterase superfamily JVX96_16800 PF00155 Aminotransferase class I and II JVX96_16805 PF01029 NusB family JVX96_16810 PF00885 6,7-dimethyl-8-ribityllumazine synthase JVX96_16815 PF00925 GTP cyclohydrolase II JVX96_16815 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase JVX96_16820 PF00677 Lumazine binding domain JVX96_16825 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JVX96_16825 PF01872 RibD C-terminal domain JVX96_16830 PF07963 Prokaryotic N-terminal methylation motif JVX96_16830 PF00114 Pilin (bacterial filament) JVX96_16850 PF05567 Neisseria PilC beta-propeller domain JVX96_16855 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor JVX96_16855 PF07963 Prokaryotic N-terminal methylation motif JVX96_16860 PF03477 ATP cone domain JVX96_16865 PF00464 Serine hydroxymethyltransferase JVX96_16870 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain JVX96_16870 PF01464 Transglycosylase SLT domain JVX96_16895 PF06167 Glucose-regulated metallo-peptidase M90 JVX96_16900 PF00149 Calcineurin-like phosphoesterase JVX96_16905 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD JVX96_16910 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD JVX96_16920 PF01406 tRNA synthetases class I (C) catalytic domain JVX96_16920 PF09190 DALR domain JVX96_16925 PF12833 Helix-turn-helix domain JVX96_16925 PF02805 Metal binding domain of Ada JVX96_16925 PF00730 HhH-GPD superfamily base excision DNA repair protein JVX96_16925 PF06029 AlkA N-terminal domain JVX96_16930 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit JVX96_16935 PF09179 TilS substrate binding domain JVX96_16935 PF01171 PP-loop family JVX96_16940 PF00696 Amino acid kinase family JVX96_16940 PF01842 ACT domain JVX96_16940 PF13840 ACT domain JVX96_16950 PF00561 alpha/beta hydrolase fold JVX96_16960 PF00672 HAMP domain JVX96_16960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JVX96_16960 PF07730 Histidine kinase JVX96_16965 PF00034 Cytochrome c JVX96_16985 PF03976 Polyphosphate kinase 2 (PPK2) JVX96_16990 PF01479 S4 domain JVX96_16995 PF08521 Two-component sensor kinase N-terminal JVX96_16995 PF00512 His Kinase A (phospho-acceptor) domain JVX96_16995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JVX96_17000 PF00486 Transcriptional regulatory protein, C terminal JVX96_17000 PF00072 Response regulator receiver domain JVX96_17005 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_17015 PF01970 Tripartite tricarboxylate transporter TctA family JVX96_17020 PF00893 Small Multidrug Resistance protein JVX96_17025 PF00873 AcrB/AcrD/AcrF family JVX96_17030 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JVX96_17035 PF02321 Outer membrane efflux protein JVX96_17045 PF00072 Response regulator receiver domain JVX96_17045 PF00158 Sigma-54 interaction domain JVX96_17045 PF02954 Bacterial regulatory protein, Fis family JVX96_17070 PF10503 Esterase PHB depolymerase JVX96_17075 PF00005 ABC transporter JVX96_17075 PF12399 Branched-chain amino acid ATP-binding cassette transporter JVX96_17080 PF00005 ABC transporter JVX96_17105 PF17991 Thioredoxin like C-terminal domain JVX96_17105 PF02683 Cytochrome C biogenesis protein transmembrane region JVX96_17105 PF00578 AhpC/TSA family JVX96_17110 PF00762 Ferrochelatase JVX96_17115 PF13419 Haloacid dehalogenase-like hydrolase JVX96_17125 PF01810 LysE type translocator JVX96_17135 PF01593 Flavin containing amine oxidoreductase JVX96_17150 PF02705 K+ potassium transporter JVX96_17155 PF13533 Biotin-lipoyl like JVX96_17160 PF00873 AcrB/AcrD/AcrF family JVX96_17175 PF05698 Bacterial trigger factor protein (TF) C-terminus JVX96_17175 PF05697 Bacterial trigger factor protein (TF) JVX96_17175 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JVX96_17180 PF00574 Clp protease JVX96_17185 PF10431 C-terminal, D2-small domain, of ClpB protein JVX96_17185 PF06689 ClpX C4-type zinc finger JVX96_17185 PF07724 AAA domain (Cdc48 subfamily) JVX96_17190 PF00004 ATPase family associated with various cellular activities (AAA) JVX96_17190 PF05362 Lon protease (S16) C-terminal proteolytic domain JVX96_17190 PF02190 ATP-dependent protease La (LON) substrate-binding domain JVX96_17220 PF01177 Asp/Glu/Hydantoin racemase JVX96_17230 PF04069 Substrate binding domain of ABC-type glycine betaine transport system JVX96_17235 PF00528 Binding-protein-dependent transport system inner membrane component JVX96_17240 PF00571 CBS domain JVX96_17240 PF00005 ABC transporter JVX96_17245 PF00206 Lyase JVX96_17245 PF10415 Fumarase C C-terminus JVX96_17250 PF13460 NAD(P)H-binding JVX96_17255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_17255 PF03466 LysR substrate binding domain JVX96_17260 PF03350 Uncharacterized protein family, UPF0114 JVX96_17265 PF16177 Acetyl-coenzyme A synthetase N-terminus JVX96_17265 PF13193 AMP-binding enzyme C-terminal domain JVX96_17265 PF00501 AMP-binding enzyme JVX96_17275 PF00034 Cytochrome c JVX96_17285 PF00920 Dehydratase family JVX96_17290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_17290 PF03466 LysR substrate binding domain JVX96_17295 PF01790 Prolipoprotein diacylglyceryl transferase JVX96_17300 PF00392 Bacterial regulatory proteins, gntR family JVX96_17300 PF07729 FCD domain JVX96_17310 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_17315 PF00378 Enoyl-CoA hydratase/isomerase JVX96_17320 PF00501 AMP-binding enzyme JVX96_17320 PF13193 AMP-binding enzyme C-terminal domain JVX96_17330 PF00795 Carbon-nitrogen hydrolase JVX96_17335 PF12833 Helix-turn-helix domain JVX96_17340 PF01925 Sulfite exporter TauE/SafE JVX96_17355 PF00654 Voltage gated chloride channel JVX96_17360 PF07715 TonB-dependent Receptor Plug Domain JVX96_17360 PF00593 TonB dependent receptor JVX96_17365 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain JVX96_17365 PF07685 CobB/CobQ-like glutamine amidotransferase domain JVX96_17370 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase JVX96_17380 PF01032 FecCD transport family JVX96_17385 PF00005 ABC transporter JVX96_17390 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP JVX96_17390 PF12557 Cob(I)alamin adenosyltransferase N terminal JVX96_17395 PF00881 Nitroreductase family JVX96_17410 PF02514 CobN/Magnesium Chelatase JVX96_17415 PF03186 CobD/Cbib protein JVX96_17425 PF03788 LrgA family JVX96_17430 PF04172 LrgB-like family JVX96_17445 PF07317 Flagellar regulator YcgR JVX96_17445 PF07238 PilZ domain JVX96_17450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_17450 PF03466 LysR substrate binding domain JVX96_17455 PF07859 alpha/beta hydrolase fold JVX96_17460 PF00529 HlyD membrane-fusion protein of T1SS JVX96_17460 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JVX96_17465 PF00873 AcrB/AcrD/AcrF family JVX96_17470 PF02321 Outer membrane efflux protein JVX96_17480 PF07685 CobB/CobQ-like glutamine amidotransferase domain JVX96_17480 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain JVX96_17485 PF02277 Phosphoribosyltransferase JVX96_17490 PF02654 Cobalamin-5-phosphate synthase JVX96_17500 PF00196 Bacterial regulatory proteins, luxR family JVX96_17500 PF00072 Response regulator receiver domain JVX96_17505 PF00672 HAMP domain JVX96_17505 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JVX96_17505 PF02203 Tar ligand binding domain homologue JVX96_17515 PF00633 Helix-hairpin-helix motif JVX96_17515 PF10576 Iron-sulfur binding domain of endonuclease III JVX96_17515 PF00730 HhH-GPD superfamily base excision DNA repair protein JVX96_17520 PF00155 Aminotransferase class I and II JVX96_17530 PF00850 Histone deacetylase domain JVX96_17550 PF17757 UvrB interaction domain JVX96_17550 PF03461 TRCF domain JVX96_17550 PF00270 DEAD/DEAH box helicase JVX96_17550 PF00271 Helicase conserved C-terminal domain JVX96_17550 PF02559 CarD-like/TRCF domain JVX96_17555 PF02542 YgbB family JVX96_17555 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase JVX96_17560 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase JVX96_17560 PF02542 YgbB family JVX96_17565 PF00512 His Kinase A (phospho-acceptor) domain JVX96_17565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JVX96_17565 PF00672 HAMP domain JVX96_17570 PF00486 Transcriptional regulatory protein, C terminal JVX96_17570 PF00072 Response regulator receiver domain JVX96_17585 PF00106 short chain dehydrogenase JVX96_17595 PF02824 TGS domain JVX96_17595 PF04607 Region found in RelA / SpoT proteins JVX96_17595 PF13291 ACT domain JVX96_17610 PF05233 PHB accumulation regulatory domain JVX96_17610 PF07879 PHB/PHA accumulation regulator DNA-binding domain JVX96_17615 PF00919 Uncharacterized protein family UPF0004 JVX96_17615 PF18693 TRAM domain JVX96_17615 PF04055 Radical SAM superfamily JVX96_17630 PF00575 S1 RNA binding domain JVX96_17630 PF00773 RNB domain JVX96_17630 PF08461 Ribonuclease R winged-helix domain JVX96_17630 PF17876 Cold shock domain JVX96_17630 PF08206 Ribonuclease B OB domain JVX96_17640 PF01256 Carbohydrate kinase JVX96_17640 PF03853 YjeF-related protein N-terminus JVX96_17650 PF01266 FAD dependent oxidoreductase JVX96_17655 PF01425 Amidase JVX96_17660 PF00318 Ribosomal protein S2 JVX96_17665 PF00889 Elongation factor TS JVX96_17670 PF00696 Amino acid kinase family JVX96_17675 PF01765 Ribosome recycling factor JVX96_17680 PF01255 Putative undecaprenyl diphosphate synthase JVX96_17690 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain JVX96_17690 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase JVX96_17690 PF13288 DXP reductoisomerase C-terminal domain JVX96_17695 PF02163 Peptidase family M50 JVX96_17695 PF17820 PDZ domain JVX96_17700 PF01103 Surface antigen JVX96_17700 PF07244 Surface antigen variable number repeat JVX96_17710 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD JVX96_17710 PF14602 Hexapeptide repeat of succinyl-transferase JVX96_17710 PF00132 Bacterial transferase hexapeptide (six repeats) JVX96_17715 PF07977 FabA-like domain JVX96_17720 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 JVX96_17720 PF00132 Bacterial transferase hexapeptide (six repeats) JVX96_17725 PF02684 Lipid-A-disaccharide synthetase JVX96_17730 PF01351 Ribonuclease HII JVX96_17735 PF00588 SpoU rRNA Methylase family JVX96_17735 PF08032 RNA 2'-O ribose methyltransferase substrate binding JVX96_17740 PF00117 Glutamine amidotransferase class-I JVX96_17740 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain JVX96_17745 PF02142 MGS-like domain JVX96_17745 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain JVX96_17745 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JVX96_17755 PF03449 Transcription elongation factor, N-terminal JVX96_17755 PF01272 Transcription elongation factor, GreA/GreB, C-term JVX96_17770 PF01985 CRS1 / YhbY (CRM) domain JVX96_17775 PF01728 FtsJ-like methyltransferase JVX96_17780 PF01434 Peptidase family M41 JVX96_17780 PF06480 FtsH Extracellular JVX96_17780 PF00004 ATPase family associated with various cellular activities (AAA) JVX96_17780 PF17862 AAA+ lid domain JVX96_17785 PF00809 Pterin binding enzyme JVX96_17790 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JVX96_17790 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JVX96_17790 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JVX96_17790 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JVX96_17795 PF00583 Acetyltransferase (GNAT) family JVX96_17800 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JVX96_17800 PF02770 Acyl-CoA dehydrogenase, middle domain JVX96_17800 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JVX96_17810 PF13545 Crp-like helix-turn-helix domain JVX96_17810 PF00027 Cyclic nucleotide-binding domain JVX96_17815 PF00378 Enoyl-CoA hydratase/isomerase JVX96_17820 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JVX96_17820 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JVX96_17820 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain JVX96_17825 PF07690 Major Facilitator Superfamily JVX96_17830 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JVX96_17830 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JVX96_17840 PF00717 Peptidase S24-like JVX96_17840 PF01726 LexA DNA binding domain JVX96_17845 PF00710 Asparaginase, N-terminal JVX96_17845 PF17763 Glutaminase/Asparaginase C-terminal domain JVX96_17850 PF05191 Adenylate kinase, active site lid JVX96_17855 PF02348 Cytidylyltransferase JVX96_17860 PF03966 Trm112p-like protein JVX96_17865 PF02606 Tetraacyldisaccharide-1-P 4'-kinase JVX96_17870 PF02472 Biopolymer transport protein ExbD/TolR JVX96_17875 PF01618 MotA/TolQ/ExbB proton channel family JVX96_17880 PF13742 OB-fold nucleic acid binding domain JVX96_17880 PF02601 Exonuclease VII, large subunit JVX96_17885 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain JVX96_17885 PF02777 Iron/manganese superoxide dismutases, C-terminal domain JVX96_17905 PF00180 Isocitrate/isopropylmalate dehydrogenase JVX96_17910 PF02617 ATP-dependent Clp protease adaptor protein ClpS JVX96_17915 PF10431 C-terminal, D2-small domain, of ClpB protein JVX96_17915 PF07724 AAA domain (Cdc48 subfamily) JVX96_17915 PF02861 Clp amino terminal domain, pathogenicity island component JVX96_17915 PF17871 AAA lid domain JVX96_17915 PF00004 ATPase family associated with various cellular activities (AAA) JVX96_17920 PF13396 Phospholipase_D-nuclease N-terminal JVX96_17920 PF13091 PLD-like domain JVX96_17925 PF08411 Exonuclease C-terminal JVX96_17925 PF00929 Exonuclease JVX96_17930 PF00132 Bacterial transferase hexapeptide (six repeats) JVX96_17945 PF07969 Amidohydrolase family JVX96_17960 PF02653 Branched-chain amino acid transport system / permease component JVX96_17965 PF02653 Branched-chain amino acid transport system / permease component JVX96_17970 PF00005 ABC transporter JVX96_17980 PF01048 Phosphorylase superfamily JVX96_17990 PF02608 ABC transporter substrate-binding protein PnrA-like JVX96_18010 PF04542 Sigma-70 region 2 JVX96_18010 PF08281 Sigma-70, region 4 JVX96_18015 PF06532 Negative regulator of sigma F JVX96_18020 PF05872 Bacterial protein of unknown function (DUF853) JVX96_18035 PF07977 FabA-like domain JVX96_18055 PF01522 Polysaccharide deacetylase JVX96_18090 PF01209 ubiE/COQ5 methyltransferase family JVX96_18095 PF01709 Transcriptional regulator JVX96_18100 PF02843 Phosphoribosylglycinamide synthetase, C domain JVX96_18100 PF02844 Phosphoribosylglycinamide synthetase, N domain JVX96_18100 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain JVX96_18105 PF01218 Coproporphyrinogen III oxidase JVX96_18110 PF01467 Cytidylyltransferase-like JVX96_18120 PF02590 Predicted SPOUT methyltransferase JVX96_18125 PF02545 Maf-like protein JVX96_18130 PF10150 Ribonuclease E/G family JVX96_18130 PF00575 S1 RNA binding domain JVX96_18135 PF00664 ABC transporter transmembrane region JVX96_18135 PF00005 ABC transporter JVX96_18140 PF04052 TolB amino-terminal domain JVX96_18140 PF07676 WD40-like Beta Propeller Repeat JVX96_18145 PF00691 OmpA family JVX96_18155 PF00899 ThiF family JVX96_18170 PF07690 Major Facilitator Superfamily JVX96_18180 PF04055 Radical SAM superfamily JVX96_18185 PF09856 Predicted transcriptional regulator (DUF2083) JVX96_18185 PF01381 Helix-turn-helix JVX96_18185 PF06114 IrrE N-terminal-like domain JVX96_18195 PF00285 Citrate synthase, C-terminal domain JVX96_18200 PF00330 Aconitase family (aconitate hydratase) JVX96_18200 PF00694 Aconitase C-terminal domain JVX96_18205 PF04303 PrpF protein JVX96_18220 PF00873 AcrB/AcrD/AcrF family JVX96_18225 PF00529 HlyD membrane-fusion protein of T1SS JVX96_18225 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JVX96_18235 PF02469 Fasciclin domain JVX96_18260 PF00005 ABC transporter JVX96_18260 PF12848 ABC transporter JVX96_18265 PF05175 Methyltransferase small domain JVX96_18270 PF01546 Peptidase family M20/M25/M40 JVX96_18270 PF07687 Peptidase dimerisation domain JVX96_18275 PF00437 Type II/IV secretion system protein JVX96_18280 PF00132 Bacterial transferase hexapeptide (six repeats) JVX96_18280 PF14602 Hexapeptide repeat of succinyl-transferase JVX96_18280 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal JVX96_18285 PF00155 Aminotransferase class I and II JVX96_18295 PF01810 LysE type translocator JVX96_18300 PF00696 Amino acid kinase family JVX96_18300 PF00583 Acetyltransferase (GNAT) family JVX96_18305 PF04408 Helicase associated domain (HA2) JVX96_18305 PF00270 DEAD/DEAH box helicase JVX96_18305 PF11898 Domain of unknown function (DUF3418) JVX96_18305 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold JVX96_18305 PF00271 Helicase conserved C-terminal domain JVX96_18315 PF00155 Aminotransferase class I and II JVX96_18320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_18320 PF03466 LysR substrate binding domain JVX96_18330 PF03739 Lipopolysaccharide export system permease LptF/LptG JVX96_18340 PF00883 Cytosol aminopeptidase family, catalytic domain JVX96_18340 PF02789 Cytosol aminopeptidase family, N-terminal domain JVX96_18355 PF13458 Periplasmic binding protein JVX96_18375 PF01145 SPFH domain / Band 7 family JVX96_18385 PF01276 Orn/Lys/Arg decarboxylase, major domain JVX96_18385 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain JVX96_18385 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain JVX96_18390 PF14743 DNA ligase OB-like domain JVX96_18390 PF01068 ATP dependent DNA ligase domain JVX96_18400 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JVX96_18405 PF00528 Binding-protein-dependent transport system inner membrane component JVX96_18410 PF12911 N-terminal TM domain of oligopeptide transport permease C JVX96_18410 PF00528 Binding-protein-dependent transport system inner membrane component JVX96_18415 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JVX96_18415 PF00005 ABC transporter JVX96_18420 PF06779 Uncharacterised MFS-type transporter YbfB JVX96_18425 PF02576 RimP N-terminal domain JVX96_18430 PF13184 NusA-like KH domain JVX96_18430 PF08529 NusA N-terminal domain JVX96_18435 PF08364 Bacterial translation initiation factor IF-2 associated region JVX96_18435 PF00009 Elongation factor Tu GTP binding domain JVX96_18435 PF04760 Translation initiation factor IF-2, N-terminal region JVX96_18435 PF11987 Translation-initiation factor 2 JVX96_18440 PF02033 Ribosome-binding factor A JVX96_18445 PF01509 TruB family pseudouridylate synthase (N terminal domain) JVX96_18445 PF16198 tRNA pseudouridylate synthase B C-terminal domain JVX96_18450 PF03144 Elongation factor Tu domain 2 JVX96_18450 PF00009 Elongation factor Tu GTP binding domain JVX96_18450 PF00679 Elongation factor G C-terminus JVX96_18470 PF08281 Sigma-70, region 4 JVX96_18470 PF04542 Sigma-70 region 2 JVX96_18480 PF01668 SmpB protein JVX96_18485 PF03364 Polyketide cyclase / dehydrase and lipid transport JVX96_18490 PF03658 RnfH family Ubiquitin JVX96_18500 PF00571 CBS domain JVX96_18500 PF00478 IMP dehydrogenase / GMP reductase domain JVX96_18515 PF00117 Glutamine amidotransferase class-I JVX96_18515 PF00958 GMP synthase C terminal domain JVX96_18515 PF02540 NAD synthase JVX96_18525 PF00107 Zinc-binding dehydrogenase JVX96_18525 PF08240 Alcohol dehydrogenase GroES-like domain JVX96_18530 PF00561 alpha/beta hydrolase fold JVX96_18535 PF08240 Alcohol dehydrogenase GroES-like domain JVX96_18535 PF00107 Zinc-binding dehydrogenase JVX96_18545 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JVX96_18575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_18575 PF03466 LysR substrate binding domain JVX96_18580 PF00175 Oxidoreductase NAD-binding domain JVX96_18580 PF00970 Oxidoreductase FAD-binding domain JVX96_18580 PF00111 2Fe-2S iron-sulfur cluster binding domain JVX96_18585 PF00848 Ring hydroxylating alpha subunit (catalytic domain) JVX96_18585 PF00355 Rieske [2Fe-2S] domain JVX96_18590 PF13577 SnoaL-like domain JVX96_18600 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_18605 PF00355 Rieske [2Fe-2S] domain JVX96_18620 PF13493 Domain of unknown function (DUF4118) JVX96_18620 PF08447 PAS fold JVX96_18620 PF00989 PAS fold JVX96_18620 PF00512 His Kinase A (phospho-acceptor) domain JVX96_18620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JVX96_18620 PF13426 PAS domain JVX96_18625 PF00072 Response regulator receiver domain JVX96_18625 PF00196 Bacterial regulatory proteins, luxR family JVX96_18650 PF14437 MafB19-like deaminase JVX96_18655 PF17676 LD-carboxypeptidase C-terminal domain JVX96_18655 PF02016 LD-carboxypeptidase N-terminal domain JVX96_18665 PF16701 Adenylate cyclase regulatory domain JVX96_18665 PF00211 Adenylate and Guanylate cyclase catalytic domain JVX96_18695 PF00072 Response regulator receiver domain JVX96_18695 PF09456 RcsC Alpha-Beta-Loop (ABL) JVX96_18695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JVX96_18695 PF00512 His Kinase A (phospho-acceptor) domain JVX96_18700 PF01339 CheB methylesterase JVX96_18705 PF01739 CheR methyltransferase, SAM binding domain JVX96_18705 PF03705 CheR methyltransferase, all-alpha domain JVX96_18710 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) JVX96_18710 PF00672 HAMP domain JVX96_18710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JVX96_18710 PF01627 Hpt domain JVX96_18710 PF00512 His Kinase A (phospho-acceptor) domain JVX96_18710 PF00072 Response regulator receiver domain JVX96_18720 PF01810 LysE type translocator JVX96_18730 PF04851 Type III restriction enzyme, res subunit JVX96_18730 PF13307 Helicase C-terminal domain JVX96_18730 PF00929 Exonuclease JVX96_18750 PF02585 GlcNAc-PI de-N-acetylase JVX96_18750 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase JVX96_18775 PF00202 Aminotransferase class-III JVX96_18780 PF00155 Aminotransferase class I and II JVX96_18790 PF00248 Aldo/keto reductase family JVX96_18795 PF12833 Helix-turn-helix domain JVX96_18795 PF06719 AraC-type transcriptional regulator N-terminus JVX96_18800 PF01545 Cation efflux family JVX96_18800 PF16916 Dimerisation domain of Zinc Transporter JVX96_18810 PF01042 Endoribonuclease L-PSP JVX96_18815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_18815 PF03466 LysR substrate binding domain JVX96_18820 PF07690 Major Facilitator Superfamily JVX96_18845 PF00248 Aldo/keto reductase family JVX96_18865 PF02423 Ornithine cyclodeaminase/mu-crystallin family JVX96_18870 PF01568 Molydopterin dinucleotide binding domain JVX96_18870 PF00384 Molybdopterin oxidoreductase JVX96_18875 PF02667 Short chain fatty acid transporter JVX96_18880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_18880 PF03466 LysR substrate binding domain JVX96_18895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JVX96_18895 PF07689 KaiB domain JVX96_18895 PF00512 His Kinase A (phospho-acceptor) domain JVX96_18900 PF00296 Luciferase-like monooxygenase JVX96_18905 PF00296 Luciferase-like monooxygenase JVX96_18915 PF00005 ABC transporter JVX96_18920 PF00497 Bacterial extracellular solute-binding proteins, family 3 JVX96_18930 PF00296 Luciferase-like monooxygenase JVX96_18955 PF00196 Bacterial regulatory proteins, luxR family JVX96_18955 PF00072 Response regulator receiver domain JVX96_18970 PF00392 Bacterial regulatory proteins, gntR family JVX96_18970 PF07729 FCD domain JVX96_18980 PF00528 Binding-protein-dependent transport system inner membrane component JVX96_18985 PF00528 Binding-protein-dependent transport system inner membrane component JVX96_18990 PF00005 ABC transporter JVX96_19000 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family JVX96_19005 PF00291 Pyridoxal-phosphate dependent enzyme JVX96_19010 PF13607 Succinyl-CoA ligase like flavodoxin domain JVX96_19010 PF13380 CoA binding domain JVX96_19010 PF00583 Acetyltransferase (GNAT) family JVX96_19015 PF01451 Low molecular weight phosphotyrosine protein phosphatase JVX96_19020 PF16822 SGNH hydrolase-like domain, acetyltransferase AlgX JVX96_19025 PF03062 MBOAT, membrane-bound O-acyltransferase family JVX96_19040 PF00296 Luciferase-like monooxygenase JVX96_19055 PF07311 Dodecin JVX96_19065 PF00005 ABC transporter JVX96_19075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_19075 PF03466 LysR substrate binding domain JVX96_19085 PF01168 Alanine racemase, N-terminal domain JVX96_19085 PF14031 Putative serine dehydratase domain JVX96_19090 PF00483 Nucleotidyl transferase JVX96_19090 PF01050 Mannose-6-phosphate isomerase JVX96_19095 PF00196 Bacterial regulatory proteins, luxR family JVX96_19095 PF00072 Response regulator receiver domain JVX96_19100 PF16363 GDP-mannose 4,6 dehydratase JVX96_19105 PF00534 Glycosyl transferases group 1 JVX96_19105 PF13579 Glycosyl transferase 4-like domain JVX96_19135 PF16363 GDP-mannose 4,6 dehydratase JVX96_19140 PF01370 NAD dependent epimerase/dehydratase family JVX96_19145 PF02397 Bacterial sugar transferase JVX96_19150 PF13614 AAA domain JVX96_19150 PF02706 Chain length determinant protein JVX96_19150 PF13807 G-rich domain on putative tyrosine kinase JVX96_19155 PF02563 Polysaccharide biosynthesis/export protein JVX96_19155 PF10531 SLBB domain JVX96_19175 PF00975 Thioesterase domain JVX96_19175 PF00668 Condensation domain JVX96_19175 PF13193 AMP-binding enzyme C-terminal domain JVX96_19175 PF00501 AMP-binding enzyme JVX96_19175 PF00550 Phosphopantetheine attachment site JVX96_19180 PF00202 Aminotransferase class-III JVX96_19180 PF16197 Ketoacyl-synthetase C-terminal extension JVX96_19180 PF00109 Beta-ketoacyl synthase, N-terminal domain JVX96_19180 PF00668 Condensation domain JVX96_19180 PF00550 Phosphopantetheine attachment site JVX96_19180 PF00501 AMP-binding enzyme JVX96_19180 PF02801 Beta-ketoacyl synthase, C-terminal domain JVX96_19180 PF13193 AMP-binding enzyme C-terminal domain JVX96_19190 PF01551 Peptidase family M23 JVX96_19190 PF01476 LysM domain JVX96_19200 PF12320 Type 5 capsule protein repressor C-terminal domain JVX96_19200 PF00149 Calcineurin-like phosphoesterase JVX96_19205 PF13175 AAA ATPase domain JVX96_19210 PF00455 DeoR C terminal sensor domain JVX96_19210 PF08220 DeoR-like helix-turn-helix domain JVX96_19215 PF04185 Phosphoesterase family JVX96_19215 PF05506 Domain of unknown function (DUF756) JVX96_19245 PF12796 Ankyrin repeats (3 copies) JVX96_19250 PF01026 TatD related DNase JVX96_19260 PF09115 DNA polymerase III, delta subunit, C terminal JVX96_19265 PF02223 Thymidylate kinase JVX96_19270 PF02618 YceG-like family JVX96_19275 PF01571 Aminomethyltransferase folate-binding domain JVX96_19290 PF07859 alpha/beta hydrolase fold JVX96_19295 PF00465 Iron-containing alcohol dehydrogenase JVX96_19300 PF04717 Type VI secretion system, phage-baseplate injector JVX96_19300 PF06715 Gp5 C-terminal repeat (3 copies) JVX96_19340 PF02321 Outer membrane efflux protein JVX96_19355 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_19360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JVX96_19360 PF00672 HAMP domain JVX96_19360 PF00512 His Kinase A (phospho-acceptor) domain JVX96_19365 PF00486 Transcriptional regulatory protein, C terminal JVX96_19365 PF00072 Response regulator receiver domain JVX96_19375 PF00873 AcrB/AcrD/AcrF family JVX96_19380 PF02321 Outer membrane efflux protein JVX96_19400 PF01850 PIN domain JVX96_19410 PF00575 S1 RNA binding domain JVX96_19410 PF17674 HHH domain JVX96_19410 PF16921 Tex protein YqgF-like domain JVX96_19410 PF09371 Tex-like protein N-terminal domain JVX96_19415 PF13185 GAF domain JVX96_19415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JVX96_19415 PF07730 Histidine kinase JVX96_19420 PF00072 Response regulator receiver domain JVX96_19420 PF01339 CheB methylesterase JVX96_19460 PF01554 MatE JVX96_19470 PF02824 TGS domain JVX96_19470 PF13291 ACT domain JVX96_19470 PF04607 Region found in RelA / SpoT proteins JVX96_19475 PF00743 Flavin-binding monooxygenase-like JVX96_19480 PF07690 Major Facilitator Superfamily JVX96_19490 PF02470 MlaD protein JVX96_19495 PF04403 Paraquat-inducible protein A JVX96_19500 PF04403 Paraquat-inducible protein A JVX96_19505 PF07690 Major Facilitator Superfamily JVX96_19510 PF07690 Major Facilitator Superfamily JVX96_19530 PF01435 Peptidase family M48 JVX96_19535 PF07690 Major Facilitator Superfamily JVX96_19550 PF03466 LysR substrate binding domain JVX96_19550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_19560 PF03466 LysR substrate binding domain JVX96_19560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_19570 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain JVX96_19570 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain JVX96_19580 PF13183 4Fe-4S dicluster domain JVX96_19580 PF02913 FAD linked oxidases, C-terminal domain JVX96_19580 PF01565 FAD binding domain JVX96_19585 PF00392 Bacterial regulatory proteins, gntR family JVX96_19585 PF07729 FCD domain JVX96_19590 PF00266 Aminotransferase class-V JVX96_19595 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_19605 PF03466 LysR substrate binding domain JVX96_19605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_19610 PF07690 Major Facilitator Superfamily JVX96_19620 PF00990 Diguanylate cyclase, GGDEF domain JVX96_19625 PF00563 EAL domain JVX96_19625 PF00990 Diguanylate cyclase, GGDEF domain JVX96_19625 PF03707 Bacterial signalling protein N terminal repeat JVX96_19640 PF02659 Putative manganese efflux pump JVX96_19645 PF03466 LysR substrate binding domain JVX96_19645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_19650 PF02525 Flavodoxin-like fold JVX96_19655 PF00106 short chain dehydrogenase JVX96_19665 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JVX96_19665 PF02770 Acyl-CoA dehydrogenase, middle domain JVX96_19665 PF18158 Adaptive response protein AidB N-terminal domain JVX96_19670 PF16884 N-terminal domain of oxidoreductase JVX96_19670 PF00107 Zinc-binding dehydrogenase JVX96_19695 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JVX96_19695 PF02770 Acyl-CoA dehydrogenase, middle domain JVX96_19695 PF12806 Acetyl-CoA dehydrogenase C-terminal like JVX96_19695 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JVX96_19700 PF02803 Thiolase, C-terminal domain JVX96_19700 PF00108 Thiolase, N-terminal domain JVX96_19705 PF01546 Peptidase family M20/M25/M40 JVX96_19705 PF07687 Peptidase dimerisation domain JVX96_19710 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JVX96_19710 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JVX96_19710 PF00378 Enoyl-CoA hydratase/isomerase JVX96_19715 PF00005 ABC transporter JVX96_19720 PF00005 ABC transporter JVX96_19720 PF12399 Branched-chain amino acid ATP-binding cassette transporter JVX96_19730 PF02653 Branched-chain amino acid transport system / permease component JVX96_19745 PF00501 AMP-binding enzyme JVX96_19745 PF13193 AMP-binding enzyme C-terminal domain JVX96_19750 PF00135 Carboxylesterase family JVX96_19760 PF02696 Uncharacterized ACR, YdiU/UPF0061 family JVX96_19765 PF01641 SelR domain JVX96_19770 PF04279 Intracellular septation protein A JVX96_19785 PF02769 AIR synthase related protein, C-terminal domain JVX96_19785 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain JVX96_19785 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal JVX96_19790 PF00557 Metallopeptidase family M24 JVX96_19795 PF08335 GlnD PII-uridylyltransferase JVX96_19795 PF01909 Nucleotidyltransferase domain JVX96_19795 PF01966 HD domain JVX96_19800 PF13185 GAF domain JVX96_19800 PF00990 Diguanylate cyclase, GGDEF domain JVX96_19805 PF13426 PAS domain JVX96_19805 PF00563 EAL domain JVX96_19805 PF00990 Diguanylate cyclase, GGDEF domain JVX96_19805 PF08448 PAS fold JVX96_19805 PF08447 PAS fold JVX96_19805 PF05231 MASE1 JVX96_19820 PF13614 AAA domain JVX96_19825 PF07238 PilZ domain JVX96_19825 PF00535 Glycosyl transferase family 2 JVX96_19825 PF03552 Cellulose synthase JVX96_19830 PF03170 Bacterial cellulose synthase subunit JVX96_19835 PF01270 Glycosyl hydrolases family 8 JVX96_19840 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) JVX96_19845 PF03707 Bacterial signalling protein N terminal repeat JVX96_19845 PF00990 Diguanylate cyclase, GGDEF domain JVX96_19845 PF00563 EAL domain JVX96_19860 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JVX96_19860 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JVX96_19860 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JVX96_19860 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JVX96_19865 PF12804 MobA-like NTP transferase domain JVX96_19865 PF00132 Bacterial transferase hexapeptide (six repeats) JVX96_19865 PF03479 Plants and Prokaryotes Conserved (PCC) domain JVX96_19870 PF01842 ACT domain JVX96_19870 PF00742 Homoserine dehydrogenase JVX96_19870 PF03447 Homoserine dehydrogenase, NAD binding domain JVX96_19875 PF00528 Binding-protein-dependent transport system inner membrane component JVX96_19880 PF00528 Binding-protein-dependent transport system inner membrane component JVX96_19885 PF00497 Bacterial extracellular solute-binding proteins, family 3 JVX96_19890 PF07681 DoxX JVX96_19895 PF01327 Polypeptide deformylase JVX96_19905 PF00533 BRCA1 C Terminus (BRCT) domain JVX96_19905 PF01653 NAD-dependent DNA ligase adenylation domain JVX96_19905 PF03120 NAD-dependent DNA ligase OB-fold domain JVX96_19905 PF03119 NAD-dependent DNA ligase C4 zinc finger domain JVX96_19905 PF12826 Helix-hairpin-helix motif JVX96_19915 PF06470 SMC proteins Flexible Hinge Domain JVX96_19915 PF02463 RecF/RecN/SMC N terminal domain JVX96_19930 PF02321 Outer membrane efflux protein JVX96_19935 PF02687 FtsX-like permease family JVX96_19935 PF12704 MacB-like periplasmic core domain JVX96_19935 PF00005 ABC transporter JVX96_19940 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JVX96_19945 PF02600 Disulfide bond formation protein DsbB JVX96_19950 PF12857 TOBE-like domain JVX96_19950 PF17850 CysA C-terminal regulatory domain JVX96_19950 PF00005 ABC transporter JVX96_19955 PF00528 Binding-protein-dependent transport system inner membrane component JVX96_19960 PF00528 Binding-protein-dependent transport system inner membrane component JVX96_19975 PF00578 AhpC/TSA family JVX96_19975 PF10417 C-terminal domain of 1-Cys peroxiredoxin JVX96_19980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_19980 PF03466 LysR substrate binding domain JVX96_19985 PF02525 Flavodoxin-like fold JVX96_19990 PF03358 NADPH-dependent FMN reductase JVX96_19995 PF08546 Ketopantoate reductase PanE/ApbA C terminal JVX96_19995 PF02558 Ketopantoate reductase PanE/ApbA JVX96_20000 PF07804 HipA-like C-terminal domain JVX96_20005 PF04820 Tryptophan halogenase JVX96_20015 PF00266 Aminotransferase class-V JVX96_20030 PF00132 Bacterial transferase hexapeptide (six repeats) JVX96_20050 PF03459 TOBE domain JVX96_20055 PF00881 Nitroreductase family JVX96_20060 PF01053 Cys/Met metabolism PLP-dependent enzyme JVX96_20065 PF00005 ABC transporter JVX96_20070 PF09084 NMT1/THI5 like JVX96_20075 PF00528 Binding-protein-dependent transport system inner membrane component JVX96_20080 PF00296 Luciferase-like monooxygenase JVX96_20085 PF09084 NMT1/THI5 like JVX96_20095 PF03358 NADPH-dependent FMN reductase JVX96_20105 PF04362 Bacterial Fe(2+) trafficking JVX96_20110 PF05430 S-adenosyl-L-methionine-dependent methyltransferase JVX96_20110 PF01266 FAD dependent oxidoreductase JVX96_20130 PF03009 Glycerophosphoryl diester phosphodiesterase family JVX96_20135 PF00378 Enoyl-CoA hydratase/isomerase JVX96_20140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JVX96_20140 PF00989 PAS fold JVX96_20140 PF00512 His Kinase A (phospho-acceptor) domain JVX96_20140 PF00672 HAMP domain JVX96_20140 PF18698 Histidine kinase sensor domain JVX96_20145 PF00486 Transcriptional regulatory protein, C terminal JVX96_20145 PF00072 Response regulator receiver domain JVX96_20150 PF01292 Prokaryotic cytochrome b561 JVX96_20155 PF00174 Oxidoreductase molybdopterin binding domain JVX96_20165 PF01625 Peptide methionine sulfoxide reductase JVX96_20190 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain JVX96_20190 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain JVX96_20195 PF00274 Fructose-bisphosphate aldolase class-I JVX96_20215 PF01266 FAD dependent oxidoreductase JVX96_20220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_20220 PF03466 LysR substrate binding domain JVX96_20225 PF02142 MGS-like domain JVX96_20230 PF00583 Acetyltransferase (GNAT) family JVX96_20245 PF01757 Acyltransferase family JVX96_20255 PF01112 Asparaginase JVX96_20260 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JVX96_20260 PF00005 ABC transporter JVX96_20265 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JVX96_20270 PF00528 Binding-protein-dependent transport system inner membrane component JVX96_20275 PF00528 Binding-protein-dependent transport system inner membrane component JVX96_20275 PF12911 N-terminal TM domain of oligopeptide transport permease C JVX96_20280 PF03576 Peptidase family S58 JVX96_20310 PF01507 Phosphoadenosine phosphosulfate reductase family JVX96_20315 PF01507 Phosphoadenosine phosphosulfate reductase family JVX96_20320 PF00009 Elongation factor Tu GTP binding domain JVX96_20325 PF11953 Domain of unknown function (DUF3470) JVX96_20325 PF00037 4Fe-4S binding domain JVX96_20335 PF00202 Aminotransferase class-III JVX96_20345 PF02743 Cache domain JVX96_20345 PF00211 Adenylate and Guanylate cyclase catalytic domain JVX96_20345 PF00672 HAMP domain JVX96_20355 PF08543 Phosphomethylpyrimidine kinase JVX96_20360 PF01266 FAD dependent oxidoreductase JVX96_20370 PF05690 Thiazole biosynthesis protein ThiG JVX96_20375 PF02581 Thiamine monophosphate synthase JVX96_20380 PF07715 TonB-dependent Receptor Plug Domain JVX96_20380 PF00593 TonB dependent receptor JVX96_20400 PF02694 Uncharacterised BCR, YnfA/UPF0060 family JVX96_20405 PF03449 Transcription elongation factor, N-terminal JVX96_20405 PF01272 Transcription elongation factor, GreA/GreB, C-term JVX96_20420 PF00196 Bacterial regulatory proteins, luxR family JVX96_20420 PF17874 MalT-like TPR region JVX96_20435 PF13180 PDZ domain JVX96_20435 PF17820 PDZ domain JVX96_20440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JVX96_20440 PF00512 His Kinase A (phospho-acceptor) domain JVX96_20445 PF00486 Transcriptional regulatory protein, C terminal JVX96_20445 PF00072 Response regulator receiver domain JVX96_20450 PF09339 IclR helix-turn-helix domain JVX96_20450 PF01614 Bacterial transcriptional regulator JVX96_20455 PF01494 FAD binding domain JVX96_20470 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain JVX96_20470 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase JVX96_20475 PF03588 Leucyl/phenylalanyl-tRNA protein transferase JVX96_20480 PF04377 Arginine-tRNA-protein transferase, C terminus JVX96_20480 PF04376 Arginine-tRNA-protein transferase, N terminus JVX96_20485 PF01614 Bacterial transcriptional regulator JVX96_20485 PF09339 IclR helix-turn-helix domain JVX96_20490 PF00768 D-alanyl-D-alanine carboxypeptidase JVX96_20495 PF08502 LeuA allosteric (dimerisation) domain JVX96_20495 PF00682 HMGL-like JVX96_20500 PF08502 LeuA allosteric (dimerisation) domain JVX96_20500 PF00682 HMGL-like JVX96_20505 PF01066 CDP-alcohol phosphatidyltransferase JVX96_20510 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain JVX96_20510 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain JVX96_20520 PF10369 Small subunit of acetolactate synthase JVX96_20525 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JVX96_20525 PF00205 Thiamine pyrophosphate enzyme, central domain JVX96_20525 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JVX96_20550 PF01219 Prokaryotic diacylglycerol kinase JVX96_20555 PF03641 Possible lysine decarboxylase JVX96_20560 PF00543 Nitrogen regulatory protein P-II JVX96_20565 PF02540 NAD synthase JVX96_20565 PF00795 Carbon-nitrogen hydrolase JVX96_20580 PF00719 Inorganic pyrophosphatase JVX96_20585 PF03030 Inorganic H+ pyrophosphatase JVX96_20595 PF01061 ABC-2 type transporter JVX96_20610 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JVX96_20670 PF13091 PLD-like domain JVX96_20680 PF00171 Aldehyde dehydrogenase family JVX96_20685 PF02535 ZIP Zinc transporter JVX96_20690 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain JVX96_20690 PF02777 Iron/manganese superoxide dismutases, C-terminal domain JVX96_20700 PF06463 Molybdenum Cofactor Synthesis C JVX96_20700 PF04055 Radical SAM superfamily JVX96_20705 PF12804 MobA-like NTP transferase domain JVX96_20710 PF00994 Probable molybdopterin binding domain JVX96_20710 PF03453 MoeA N-terminal region (domain I and II) JVX96_20710 PF03454 MoeA C-terminal region (domain IV) JVX96_20720 PF00075 RNase H JVX96_20730 PF00753 Metallo-beta-lactamase superfamily JVX96_20730 PF16123 Hydroxyacylglutathione hydrolase C-terminus JVX96_20735 PF01464 Transglycosylase SLT domain JVX96_20735 PF01476 LysM domain JVX96_20740 PF06772 Bacterial low temperature requirement A protein (LtrA) JVX96_20745 PF00528 Binding-protein-dependent transport system inner membrane component JVX96_20750 PF00005 ABC transporter JVX96_20765 PF13662 Toprim domain JVX96_20765 PF02132 RecR protein JVX96_20770 PF02575 YbaB/EbfC DNA-binding family JVX96_20775 PF12169 DNA polymerase III subunits gamma and tau domain III JVX96_20775 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding JVX96_20775 PF12170 DNA polymerase III tau subunit V interacting with alpha JVX96_20790 PF13361 UvrD-like helicase C-terminal domain JVX96_20790 PF12705 PD-(D/E)XK nuclease superfamily JVX96_20790 PF00580 UvrD/REP helicase N-terminal domain JVX96_20800 PF00085 Thioredoxin JVX96_20805 PF07498 Rho termination factor, N-terminal domain JVX96_20805 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JVX96_20805 PF07497 Rho termination factor, RNA-binding domain JVX96_20810 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JVX96_20810 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JVX96_20815 PF01197 Ribosomal protein L31 JVX96_20825 PF01554 MatE JVX96_20830 PF00989 PAS fold JVX96_20830 PF11808 Phosphate regulon sensor protein PhoR JVX96_20830 PF00512 His Kinase A (phospho-acceptor) domain JVX96_20830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JVX96_20835 PF00486 Transcriptional regulatory protein, C terminal JVX96_20835 PF00072 Response regulator receiver domain JVX96_20840 PF01895 PhoU domain JVX96_20845 PF00005 ABC transporter JVX96_20850 PF00528 Binding-protein-dependent transport system inner membrane component JVX96_20855 PF00528 Binding-protein-dependent transport system inner membrane component JVX96_20860 PF12849 PBP superfamily domain JVX96_20865 PF02541 Ppx/GppA phosphatase family JVX96_20875 PF13089 Polyphosphate kinase N-terminal domain JVX96_20875 PF17941 Polyphosphate kinase C-terminal domain 1 JVX96_20875 PF13090 Polyphosphate kinase C-terminal domain 2 JVX96_20875 PF02503 Polyphosphate kinase middle domain JVX96_20885 PF07992 Pyridine nucleotide-disulphide oxidoreductase JVX96_20885 PF13192 Thioredoxin domain JVX96_21040 PF07484 Phage Tail Collar Domain JVX96_21095 PF02463 RecF/RecN/SMC N terminal domain JVX96_21190 PF00043 Glutathione S-transferase, C-terminal domain JVX96_21190 PF02798 Glutathione S-transferase, N-terminal domain JVX96_21210 PF01546 Peptidase family M20/M25/M40 JVX96_21210 PF07687 Peptidase dimerisation domain JVX96_21215 PF12697 Alpha/beta hydrolase family JVX96_21220 PF00155 Aminotransferase class I and II JVX96_21230 PF00392 Bacterial regulatory proteins, gntR family JVX96_21230 PF07729 FCD domain JVX96_21235 PF02668 Taurine catabolism dioxygenase TauD, TfdA family JVX96_21240 PF00596 Class II Aldolase and Adducin N-terminal domain JVX96_21245 PF00528 Binding-protein-dependent transport system inner membrane component JVX96_21255 PF00005 ABC transporter JVX96_21265 PF01425 Amidase JVX96_21275 PF14031 Putative serine dehydratase domain JVX96_21275 PF01168 Alanine racemase, N-terminal domain JVX96_21280 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JVX96_21280 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JVX96_21280 PF02770 Acyl-CoA dehydrogenase, middle domain JVX96_21290 PF00378 Enoyl-CoA hydratase/isomerase JVX96_21310 PF01037 Lrp/AsnC ligand binding domain JVX96_21320 PF02515 CoA-transferase family III JVX96_21330 PF00892 EamA-like transporter family JVX96_21335 PF13426 PAS domain JVX96_21335 PF00990 Diguanylate cyclase, GGDEF domain JVX96_21335 PF00563 EAL domain JVX96_21340 PF17158 Membrane-associated sensor, integral membrane domain JVX96_21340 PF00990 Diguanylate cyclase, GGDEF domain JVX96_21345 PF08497 Radical SAM N-terminal JVX96_21345 PF11842 Domain of unknown function (DUF3362) JVX96_21345 PF04055 Radical SAM superfamily JVX96_21350 PF01047 MarR family JVX96_21350 PF00583 Acetyltransferase (GNAT) family JVX96_21360 PF06314 Acetoacetate decarboxylase (ADC) JVX96_21380 PF03631 Virulence factor BrkB JVX96_21390 PF02417 Chromate transporter JVX96_21395 PF00248 Aldo/keto reductase family JVX96_21425 PF00588 SpoU rRNA Methylase family JVX96_21425 PF08032 RNA 2'-O ribose methyltransferase substrate binding JVX96_21440 PF00005 ABC transporter JVX96_21445 PF13472 GDSL-like Lipase/Acylhydrolase family JVX96_21455 PF01053 Cys/Met metabolism PLP-dependent enzyme JVX96_21475 PF00709 Adenylosuccinate synthetase JVX96_21480 PF13393 Histidyl-tRNA synthetase JVX96_21490 PF01145 SPFH domain / Band 7 family JVX96_21495 PF01145 SPFH domain / Band 7 family JVX96_21495 PF12221 Bacterial membrane protein N terminal JVX96_21500 PF16360 GTP-binding GTPase Middle Region JVX96_21500 PF13167 GTP-binding GTPase N-terminal JVX96_21500 PF01926 50S ribosome-binding GTPase JVX96_21505 PF17209 Hfq protein JVX96_21510 PF01926 50S ribosome-binding GTPase JVX96_21510 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal JVX96_21515 PF13360 PQQ-like domain JVX96_21525 PF13393 Histidyl-tRNA synthetase JVX96_21525 PF03129 Anticodon binding domain JVX96_21530 PF04551 GcpE protein JVX96_21545 PF04055 Radical SAM superfamily JVX96_21550 PF00334 Nucleoside diphosphate kinase JVX96_21555 PF00849 RNA pseudouridylate synthase JVX96_21555 PF01479 S4 domain JVX96_21560 PF04079 Segregation and condensation complex subunit ScpB JVX96_21565 PF01479 S4 domain JVX96_21565 PF00849 RNA pseudouridylate synthase JVX96_21570 PF13525 Outer membrane lipoprotein JVX96_21575 PF13307 Helicase C-terminal domain JVX96_21575 PF06733 DEAD_2 JVX96_21595 PF03969 AFG1-like ATPase JVX96_21600 PF07992 Pyridine nucleotide-disulphide oxidoreductase JVX96_21600 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JVX96_21605 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JVX96_21605 PF00364 Biotin-requiring enzyme JVX96_21605 PF02817 e3 binding domain JVX96_21610 PF16078 2-oxoglutarate dehydrogenase N-terminus JVX96_21610 PF00676 Dehydrogenase E1 component JVX96_21610 PF16870 2-oxoglutarate dehydrogenase C-terminal JVX96_21610 PF02779 Transketolase, pyrimidine binding domain JVX96_21615 PF00501 AMP-binding enzyme JVX96_21615 PF16177 Acetyl-coenzyme A synthetase N-terminus JVX96_21615 PF13193 AMP-binding enzyme C-terminal domain JVX96_21630 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal JVX96_21630 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal JVX96_21640 PF00877 NlpC/P60 family JVX96_21645 PF07992 Pyridine nucleotide-disulphide oxidoreductase JVX96_21645 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JVX96_21650 PF00227 Proteasome subunit JVX96_21655 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JVX96_21655 PF02817 e3 binding domain JVX96_21655 PF00364 Biotin-requiring enzyme JVX96_21660 PF17831 Pyruvate dehydrogenase E1 component middle domain JVX96_21660 PF00456 Transketolase, thiamine diphosphate binding domain JVX96_21665 PF00512 His Kinase A (phospho-acceptor) domain JVX96_21665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JVX96_21665 PF00989 PAS fold JVX96_21670 PF00072 Response regulator receiver domain JVX96_21670 PF00196 Bacterial regulatory proteins, luxR family JVX96_21675 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain JVX96_21675 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain JVX96_21680 PF01432 Peptidase family M3 JVX96_21690 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) JVX96_21695 PF01180 Dihydroorotate dehydrogenase JVX96_21710 PF01266 FAD dependent oxidoreductase JVX96_21720 PF00929 Exonuclease JVX96_21725 PF00111 2Fe-2S iron-sulfur cluster binding domain JVX96_21730 PF00012 Hsp70 protein JVX96_21735 PF07743 HSCB C-terminal oligomerisation domain JVX96_21740 PF01521 Iron-sulphur cluster biosynthesis JVX96_21745 PF01592 NifU-like N terminal domain JVX96_21750 PF00266 Aminotransferase class-V JVX96_21755 PF02082 Transcriptional regulator JVX96_21760 PF04851 Type III restriction enzyme, res subunit JVX96_21760 PF17757 UvrB interaction domain JVX96_21760 PF12344 Ultra-violet resistance protein B JVX96_21760 PF02151 UvrB/uvrC motif JVX96_21760 PF00271 Helicase conserved C-terminal domain JVX96_21765 PF00155 Aminotransferase class I and II JVX96_21775 PF04060 Putative Fe-S cluster JVX96_21785 PF00892 EamA-like transporter family JVX96_21790 PF01037 Lrp/AsnC ligand binding domain JVX96_21800 PF06968 Biotin and Thiamin Synthesis associated domain JVX96_21800 PF04055 Radical SAM superfamily JVX96_21805 PF02785 Biotin carboxylase C-terminal domain JVX96_21805 PF00289 Biotin carboxylase, N-terminal domain JVX96_21805 PF18140 Propionyl-coenzyme A carboxylase BT domain JVX96_21805 PF00364 Biotin-requiring enzyme JVX96_21805 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JVX96_21810 PF01039 Carboxyl transferase domain JVX96_21825 PF02310 B12 binding domain JVX96_21825 PF01642 Methylmalonyl-CoA mutase JVX96_21830 PF07729 FCD domain JVX96_21830 PF00392 Bacterial regulatory proteins, gntR family JVX96_21835 PF09339 IclR helix-turn-helix domain JVX96_21840 PF01207 Dihydrouridine synthase (Dus) JVX96_21845 PF00072 Response regulator receiver domain JVX96_21845 PF02954 Bacterial regulatory protein, Fis family JVX96_21845 PF00158 Sigma-54 interaction domain JVX96_21865 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JVX96_21865 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JVX96_21865 PF00205 Thiamine pyrophosphate enzyme, central domain JVX96_21870 PF01037 Lrp/AsnC ligand binding domain JVX96_21875 PF00691 OmpA family JVX96_21880 PF01738 Dienelactone hydrolase family JVX96_21885 PF01613 Flavin reductase like domain JVX96_21900 PF12833 Helix-turn-helix domain JVX96_21900 PF14525 AraC-binding-like domain JVX96_21925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_21925 PF03466 LysR substrate binding domain JVX96_21930 PF02525 Flavodoxin-like fold JVX96_21940 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_21955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_21955 PF03466 LysR substrate binding domain JVX96_21965 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_21970 PF03480 Bacterial extracellular solute-binding protein, family 7 JVX96_22000 PF00440 Bacterial regulatory proteins, tetR family JVX96_22000 PF08362 YcdC-like protein, C-terminal region JVX96_22005 PF03167 Uracil DNA glycosylase superfamily JVX96_22010 PF05199 GMC oxidoreductase JVX96_22010 PF00732 GMC oxidoreductase JVX96_22025 PF00005 ABC transporter JVX96_22035 PF02653 Branched-chain amino acid transport system / permease component JVX96_22040 PF01979 Amidohydrolase family JVX96_22095 PF00155 Aminotransferase class I and II JVX96_22095 PF00392 Bacterial regulatory proteins, gntR family JVX96_22100 PF01068 ATP dependent DNA ligase domain JVX96_22100 PF04679 ATP dependent DNA ligase C terminal region JVX96_22115 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) JVX96_22130 PF01497 Periplasmic binding protein JVX96_22135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JVX96_22135 PF00512 His Kinase A (phospho-acceptor) domain JVX96_22135 PF00360 Phytochrome region JVX96_22135 PF01590 GAF domain JVX96_22135 PF08446 PAS fold JVX96_22160 PF07728 AAA domain (dynein-related subfamily) JVX96_22160 PF13519 von Willebrand factor type A domain JVX96_22160 PF17863 AAA lid domain JVX96_22165 PF02514 CobN/Magnesium Chelatase JVX96_22170 PF07683 Cobalamin synthesis protein cobW C-terminal domain JVX96_22170 PF02492 CobW/HypB/UreG, nucleotide-binding domain JVX96_22185 PF07715 TonB-dependent Receptor Plug Domain JVX96_22185 PF00593 TonB dependent receptor JVX96_22200 PF02254 TrkA-N domain JVX96_22200 PF00999 Sodium/hydrogen exchanger family JVX96_22205 PF00375 Sodium:dicarboxylate symporter family JVX96_22210 PF00106 short chain dehydrogenase JVX96_22215 PF01965 DJ-1/PfpI family JVX96_22220 PF00994 Probable molybdopterin binding domain JVX96_22220 PF18146 Damage-inducible protein CinA KH domain JVX96_22220 PF02464 Competence-damaged protein JVX96_22225 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_22230 PF03328 HpcH/HpaI aldolase/citrate lyase family JVX96_22235 PF02515 CoA-transferase family III JVX96_22245 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_22250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_22250 PF03466 LysR substrate binding domain JVX96_22260 PF02798 Glutathione S-transferase, N-terminal domain JVX96_22270 PF02803 Thiolase, C-terminal domain JVX96_22270 PF00108 Thiolase, N-terminal domain JVX96_22275 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus JVX96_22285 PF02578 Multi-copper polyphenol oxidoreductase laccase JVX96_22290 PF13417 Glutathione S-transferase, N-terminal domain JVX96_22300 PF01557 Fumarylacetoacetate (FAA) hydrolase family JVX96_22310 PF05981 CreA protein JVX96_22315 PF01476 LysM domain JVX96_22315 PF01551 Peptidase family M23 JVX96_22325 PF13091 PLD-like domain JVX96_22335 PF03466 LysR substrate binding domain JVX96_22335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_22340 PF08267 Cobalamin-independent synthase, N-terminal domain JVX96_22340 PF01717 Cobalamin-independent synthase, Catalytic domain JVX96_22345 PF13532 2OG-Fe(II) oxygenase superfamily JVX96_22350 PF00005 ABC transporter JVX96_22350 PF00664 ABC transporter transmembrane region JVX96_22370 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JVX96_22370 PF00672 HAMP domain JVX96_22370 PF02203 Tar ligand binding domain homologue JVX96_22395 PF02446 4-alpha-glucanotransferase JVX96_22405 PF00128 Alpha amylase, catalytic domain JVX96_22405 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JVX96_22415 PF16657 Maltogenic Amylase, C-terminal domain JVX96_22415 PF00128 Alpha amylase, catalytic domain JVX96_22420 PF11896 Domain of unknown function (DUF3416) JVX96_22420 PF00128 Alpha amylase, catalytic domain JVX96_22425 PF00128 Alpha amylase, catalytic domain JVX96_22425 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JVX96_22425 PF02806 Alpha amylase, C-terminal all-beta domain JVX96_22445 PF13180 PDZ domain JVX96_22450 PF00793 DAHP synthetase I family JVX96_22460 PF00437 Type II/IV secretion system protein JVX96_22460 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain JVX96_22470 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JVX96_22470 PF02203 Tar ligand binding domain homologue JVX96_22470 PF00672 HAMP domain JVX96_22480 PF03466 LysR substrate binding domain JVX96_22480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_22485 PF04909 Amidohydrolase JVX96_22490 PF03737 Aldolase/RraA JVX96_22495 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit JVX96_22495 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase JVX96_22500 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_22510 PF01565 FAD binding domain JVX96_22510 PF02913 FAD linked oxidases, C-terminal domain JVX96_22515 PF07063 Domain of unknown function (DUF1338) JVX96_22550 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JVX96_22550 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JVX96_22555 PF00378 Enoyl-CoA hydratase/isomerase JVX96_22560 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JVX96_22560 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JVX96_22560 PF02770 Acyl-CoA dehydrogenase, middle domain JVX96_22570 PF00171 Aldehyde dehydrogenase family JVX96_22575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_22575 PF03466 LysR substrate binding domain JVX96_22580 PF00155 Aminotransferase class I and II JVX96_22590 PF02515 CoA-transferase family III JVX96_22595 PF01144 Coenzyme A transferase JVX96_22600 PF01144 Coenzyme A transferase JVX96_22605 PF00196 Bacterial regulatory proteins, luxR family JVX96_22605 PF00072 Response regulator receiver domain JVX96_22615 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_22620 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JVX96_22625 PF00682 HMGL-like JVX96_22630 PF02515 CoA-transferase family III JVX96_22645 PF00171 Aldehyde dehydrogenase family JVX96_22650 PF01590 GAF domain JVX96_22650 PF02954 Bacterial regulatory protein, Fis family JVX96_22650 PF00158 Sigma-54 interaction domain JVX96_22660 PF04349 Periplasmic glucan biosynthesis protein, MdoG JVX96_22670 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JVX96_22670 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase JVX96_22675 PF13520 Amino acid permease JVX96_22680 PF06751 Ethanolamine ammonia lyase large subunit (EutB) JVX96_22685 PF05985 Ethanolamine ammonia-lyase light chain (EutC) JVX96_22690 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JVX96_22690 PF00034 Cytochrome c JVX96_22695 PF05199 GMC oxidoreductase JVX96_22695 PF00732 GMC oxidoreductase JVX96_22700 PF13618 Gluconate 2-dehydrogenase subunit 3 JVX96_22710 PF08019 Phosphoethanolamine transferase EptA/EptB JVX96_22710 PF00884 Sulfatase JVX96_22715 PF01569 PAP2 superfamily JVX96_22725 PF00072 Response regulator receiver domain JVX96_22725 PF00486 Transcriptional regulatory protein, C terminal JVX96_22730 PF08521 Two-component sensor kinase N-terminal JVX96_22730 PF00512 His Kinase A (phospho-acceptor) domain JVX96_22730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JVX96_22760 PF01370 NAD dependent epimerase/dehydratase family JVX96_22765 PF03480 Bacterial extracellular solute-binding protein, family 7 JVX96_22775 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component JVX96_22775 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component JVX96_22785 PF07690 Major Facilitator Superfamily JVX96_22810 PF03466 LysR substrate binding domain JVX96_22810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_22815 PF00501 AMP-binding enzyme JVX96_22830 PF07690 Major Facilitator Superfamily JVX96_22855 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JVX96_22860 PF01571 Aminomethyltransferase folate-binding domain JVX96_22860 PF08669 Glycine cleavage T-protein C-terminal barrel domain JVX96_22865 PF01597 Glycine cleavage H-protein JVX96_22870 PF02347 Glycine cleavage system P-protein JVX96_22885 PF08359 YsiA-like protein, C-terminal region JVX96_22885 PF00440 Bacterial regulatory proteins, tetR family JVX96_22895 PF03060 Nitronate monooxygenase JVX96_22905 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JVX96_22920 PF03942 DTW domain JVX96_22930 PF12833 Helix-turn-helix domain JVX96_22960 PF07519 Tannase and feruloyl esterase JVX96_22985 PF00083 Sugar (and other) transporter JVX96_22985 PF07690 Major Facilitator Superfamily JVX96_22990 PF01261 Xylose isomerase-like TIM barrel JVX96_22990 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JVX96_22995 PF00561 alpha/beta hydrolase fold JVX96_23000 PF07690 Major Facilitator Superfamily JVX96_23010 PF10397 Adenylosuccinate lyase C-terminus JVX96_23010 PF00206 Lyase JVX96_23015 PF18317 Shikimate 5'-dehydrogenase C-terminal domain JVX96_23015 PF08501 Shikimate dehydrogenase substrate binding domain JVX96_23015 PF01488 Shikimate / quinate 5-dehydrogenase JVX96_23020 PF08501 Shikimate dehydrogenase substrate binding domain JVX96_23020 PF01488 Shikimate / quinate 5-dehydrogenase JVX96_23020 PF18317 Shikimate 5'-dehydrogenase C-terminal domain JVX96_23025 PF01614 Bacterial transcriptional regulator JVX96_23025 PF09339 IclR helix-turn-helix domain JVX96_23035 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_23040 PF00486 Transcriptional regulatory protein, C terminal JVX96_23040 PF00072 Response regulator receiver domain JVX96_23045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JVX96_23045 PF00512 His Kinase A (phospho-acceptor) domain JVX96_23065 PF00005 ABC transporter JVX96_23070 PF02653 Branched-chain amino acid transport system / permease component JVX96_23075 PF13407 Periplasmic binding protein domain JVX96_23090 PF05593 RHS Repeat JVX96_23090 PF03527 RHS protein JVX96_23110 PF05593 RHS Repeat JVX96_23110 PF03527 RHS protein JVX96_23115 PF04717 Type VI secretion system, phage-baseplate injector JVX96_23115 PF06715 Gp5 C-terminal repeat (3 copies) JVX96_23120 PF00149 Calcineurin-like phosphoesterase JVX96_23130 PF01264 Chorismate synthase JVX96_23140 PF00561 alpha/beta hydrolase fold JVX96_23150 PF00593 TonB dependent receptor JVX96_23150 PF07715 TonB-dependent Receptor Plug Domain JVX96_23155 PF18331 PKHD-type hydroxylase C-terminal domain JVX96_23155 PF13640 2OG-Fe(II) oxygenase superfamily JVX96_23160 PF00378 Enoyl-CoA hydratase/isomerase JVX96_23175 PF13452 N-terminal half of MaoC dehydratase JVX96_23185 PF13193 AMP-binding enzyme C-terminal domain JVX96_23185 PF00501 AMP-binding enzyme JVX96_23195 PF12951 Passenger-associated-transport-repeat JVX96_23205 PF08173 Membrane bound YbgT-like protein JVX96_23210 PF02322 Cytochrome bd terminal oxidase subunit II JVX96_23215 PF01654 Cytochrome bd terminal oxidase subunit I JVX96_23220 PF00664 ABC transporter transmembrane region JVX96_23220 PF00005 ABC transporter JVX96_23225 PF00005 ABC transporter JVX96_23225 PF00664 ABC transporter transmembrane region JVX96_23240 PF12806 Acetyl-CoA dehydrogenase C-terminal like JVX96_23240 PF02770 Acyl-CoA dehydrogenase, middle domain JVX96_23240 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JVX96_23240 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JVX96_23245 PF01012 Electron transfer flavoprotein domain JVX96_23245 PF00766 Electron transfer flavoprotein FAD-binding domain JVX96_23250 PF01012 Electron transfer flavoprotein domain JVX96_23255 PF00596 Class II Aldolase and Adducin N-terminal domain JVX96_23260 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JVX96_23265 PF00528 Binding-protein-dependent transport system inner membrane component JVX96_23270 PF00528 Binding-protein-dependent transport system inner membrane component JVX96_23270 PF12911 N-terminal TM domain of oligopeptide transport permease C JVX96_23275 PF00005 ABC transporter JVX96_23275 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JVX96_23280 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JVX96_23285 PF00202 Aminotransferase class-III JVX96_23290 PF00850 Histone deacetylase domain JVX96_23305 PF00106 short chain dehydrogenase JVX96_23305 PF00300 Histidine phosphatase superfamily (branch 1) JVX96_23310 PF00850 Histone deacetylase domain JVX96_23320 PF00202 Aminotransferase class-III JVX96_23325 PF00924 Mechanosensitive ion channel JVX96_23325 PF12795 Mechanosensitive ion channel porin domain JVX96_23325 PF12794 Mechanosensitive ion channel inner membrane domain 1 JVX96_23330 PF00850 Histone deacetylase domain JVX96_23335 PF17863 AAA lid domain JVX96_23335 PF07726 ATPase family associated with various cellular activities (AAA) JVX96_23345 PF01841 Transglutaminase-like superfamily JVX96_23345 PF13559 Domain of unknown function (DUF4129) JVX96_23345 PF11992 Domain of unknown function (DUF3488) JVX96_23350 PF13406 Transglycosylase SLT domain JVX96_23365 PF00109 Beta-ketoacyl synthase, N-terminal domain JVX96_23365 PF02801 Beta-ketoacyl synthase, C-terminal domain JVX96_23370 PF00550 Phosphopantetheine attachment site JVX96_23380 PF00005 ABC transporter JVX96_23395 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JVX96_23395 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JVX96_23405 PF01266 FAD dependent oxidoreductase JVX96_23405 PF16901 C-terminal domain of alpha-glycerophosphate oxidase JVX96_23410 PF08220 DeoR-like helix-turn-helix domain JVX96_23410 PF00455 DeoR C terminal sensor domain JVX96_23415 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JVX96_23415 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JVX96_23425 PF08019 Phosphoethanolamine transferase EptA/EptB JVX96_23425 PF00884 Sulfatase JVX96_23430 PF08479 POTRA domain, ShlB-type JVX96_23430 PF17287 POTRA domain JVX96_23430 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB JVX96_23440 PF07262 CDI immunity protein JVX96_23445 PF05860 haemagglutination activity domain JVX96_23445 PF04829 Pre-toxin domain with VENN motif JVX96_23445 PF13332 Hemagglutinin repeat JVX96_23445 PF05860 haemagglutination activity domain JVX96_23445 PF13018 Extended Signal Peptide of Type V secretion system JVX96_23445 PF13018 Extended Signal Peptide of Type V secretion system JVX96_23445 PF13332 Hemagglutinin repeat JVX96_23445 PF04829 Pre-toxin domain with VENN motif JVX96_23455 PF14403 Circularly permuted ATP-grasp type 2 JVX96_23460 PF00378 Enoyl-CoA hydratase/isomerase JVX96_23465 PF03772 Competence protein JVX96_23465 PF00753 Metallo-beta-lactamase superfamily JVX96_23475 PF14403 Circularly permuted ATP-grasp type 2 JVX96_23475 PF04168 A predicted alpha-helical domain with a conserved ER motif. JVX96_23480 PF00497 Bacterial extracellular solute-binding proteins, family 3 JVX96_23485 PF01841 Transglutaminase-like superfamily JVX96_23485 PF08379 Bacterial transglutaminase-like N-terminal region JVX96_23510 PF03691 Uncharacterised protein family (UPF0167) JVX96_23520 PF03466 LysR substrate binding domain JVX96_23520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_23525 PF00037 4Fe-4S binding domain JVX96_23530 PF00378 Enoyl-CoA hydratase/isomerase JVX96_23535 PF02515 CoA-transferase family III JVX96_23545 PF00528 Binding-protein-dependent transport system inner membrane component JVX96_23550 PF00005 ABC transporter JVX96_23560 PF06715 Gp5 C-terminal repeat (3 copies) JVX96_23560 PF04717 Type VI secretion system, phage-baseplate injector JVX96_23565 PF01476 LysM domain JVX96_23565 PF05257 CHAP domain JVX96_23575 PF09456 RcsC Alpha-Beta-Loop (ABL) JVX96_23575 PF00512 His Kinase A (phospho-acceptor) domain JVX96_23575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JVX96_23575 PF00072 Response regulator receiver domain JVX96_23585 PF00486 Transcriptional regulatory protein, C terminal JVX96_23585 PF00072 Response regulator receiver domain JVX96_23595 PF01494 FAD binding domain JVX96_23600 PF05199 GMC oxidoreductase JVX96_23600 PF00732 GMC oxidoreductase JVX96_23605 PF00356 Bacterial regulatory proteins, lacI family JVX96_23610 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JVX96_23610 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JVX96_23615 PF00294 pfkB family carbohydrate kinase JVX96_23625 PF00005 ABC transporter JVX96_23630 PF00497 Bacterial extracellular solute-binding proteins, family 3 JVX96_23635 PF00528 Binding-protein-dependent transport system inner membrane component JVX96_23640 PF00528 Binding-protein-dependent transport system inner membrane component JVX96_23645 PF00857 Isochorismatase family JVX96_23655 PF12706 Beta-lactamase superfamily domain JVX96_23665 PF00521 DNA gyrase/topoisomerase IV, subunit A JVX96_23670 PF01464 Transglycosylase SLT domain JVX96_23670 PF01551 Peptidase family M23 JVX96_23670 PF10145 Phage-related minor tail protein JVX96_23680 PF00986 DNA gyrase B subunit, carboxyl terminus JVX96_23680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JVX96_23680 PF00204 DNA gyrase B JVX96_23680 PF01751 Toprim domain JVX96_23685 PF07690 Major Facilitator Superfamily JVX96_23700 PF00701 Dihydrodipicolinate synthetase family JVX96_23705 PF06804 NlpB/DapX lipoprotein JVX96_23725 PF08007 Cupin superfamily protein JVX96_23730 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JVX96_23740 PF00692 dUTPase JVX96_23750 PF04127 DNA / pantothenate metabolism flavoprotein JVX96_23750 PF02441 Flavoprotein JVX96_23755 PF06418 CTP synthase N-terminus JVX96_23755 PF00117 Glutamine amidotransferase class-I JVX96_23765 PF03952 Enolase, N-terminal domain JVX96_23765 PF00113 Enolase, C-terminal TIM barrel domain JVX96_23770 PF04977 Septum formation initiator JVX96_23775 PF04973 Nicotinamide mononucleotide transporter JVX96_23790 PF01430 Hsp33 protein JVX96_23795 PF00132 Bacterial transferase hexapeptide (six repeats) JVX96_23800 PF04305 Protein of unknown function (DUF455) JVX96_23810 PF02803 Thiolase, C-terminal domain JVX96_23810 PF00108 Thiolase, N-terminal domain JVX96_23815 PF00440 Bacterial regulatory proteins, tetR family JVX96_23820 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_23825 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_23835 PF02899 Phage integrase, N-terminal SAM-like domain JVX96_23835 PF00589 Phage integrase family JVX96_23840 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_23855 PF07690 Major Facilitator Superfamily JVX96_23870 PF00550 Phosphopantetheine attachment site JVX96_23875 PF00109 Beta-ketoacyl synthase, N-terminal domain JVX96_23875 PF02801 Beta-ketoacyl synthase, C-terminal domain JVX96_23880 PF07715 TonB-dependent Receptor Plug Domain JVX96_23880 PF07660 Secretin and TonB N terminus short domain JVX96_23880 PF00593 TonB dependent receptor JVX96_23885 PF04773 FecR protein JVX96_23885 PF16220 Domain of unknown function (DUF4880) JVX96_23890 PF04542 Sigma-70 region 2 JVX96_23890 PF08281 Sigma-70, region 4 JVX96_23895 PF03466 LysR substrate binding domain JVX96_23895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_23905 PF10696 Protein of unknown function (DUF2501) JVX96_23910 PF01740 STAS domain JVX96_23910 PF00916 Sulfate permease family JVX96_23915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_23915 PF03466 LysR substrate binding domain JVX96_23925 PF00472 RF-1 domain JVX96_23930 PF00108 Thiolase, N-terminal domain JVX96_23930 PF02803 Thiolase, C-terminal domain JVX96_23940 PF02861 Clp amino terminal domain, pathogenicity island component JVX96_23940 PF10431 C-terminal, D2-small domain, of ClpB protein JVX96_23940 PF17871 AAA lid domain JVX96_23940 PF07724 AAA domain (Cdc48 subfamily) JVX96_23940 PF00004 ATPase family associated with various cellular activities (AAA) JVX96_23945 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_23950 PF02391 MoaE protein JVX96_23955 PF00701 Dihydrodipicolinate synthetase family JVX96_23965 PF03453 MoeA N-terminal region (domain I and II) JVX96_23965 PF00994 Probable molybdopterin binding domain JVX96_23965 PF03454 MoeA C-terminal region (domain IV) JVX96_23970 PF03205 Molybdopterin guanine dinucleotide synthesis protein B JVX96_23975 PF14821 Threonine synthase N terminus JVX96_23975 PF00291 Pyridoxal-phosphate dependent enzyme JVX96_23980 PF00742 Homoserine dehydrogenase JVX96_23980 PF01842 ACT domain JVX96_23980 PF03447 Homoserine dehydrogenase, NAD binding domain JVX96_23990 PF00155 Aminotransferase class I and II JVX96_24000 PF00578 AhpC/TSA family JVX96_24005 PF02562 PhoH-like protein JVX96_24005 PF13638 PIN domain JVX96_24015 PF01878 EVE domain JVX96_24030 PF00772 DnaB-like helicase N terminal domain JVX96_24030 PF03796 DnaB-like helicase C terminal domain JVX96_24035 PF03948 Ribosomal protein L9, C-terminal domain JVX96_24035 PF01281 Ribosomal protein L9, N-terminal domain JVX96_24040 PF01084 Ribosomal protein S18 JVX96_24050 PF01250 Ribosomal protein S6 JVX96_24060 PF02896 PEP-utilising enzyme, TIM barrel domain JVX96_24060 PF00391 PEP-utilising enzyme, mobile domain JVX96_24060 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain JVX96_24065 PF03618 Kinase/pyrophosphorylase JVX96_24070 PF07992 Pyridine nucleotide-disulphide oxidoreductase JVX96_24070 PF13192 Thioredoxin domain JVX96_24075 PF00578 AhpC/TSA family JVX96_24075 PF10417 C-terminal domain of 1-Cys peroxiredoxin JVX96_24080 PF00210 Ferritin-like domain JVX96_24100 PF02424 ApbE family JVX96_24105 PF00175 Oxidoreductase NAD-binding domain JVX96_24105 PF00258 Flavodoxin JVX96_24105 PF00667 FAD binding domain JVX96_24110 PF13640 2OG-Fe(II) oxygenase superfamily JVX96_24110 PF18331 PKHD-type hydroxylase C-terminal domain JVX96_24125 PF01618 MotA/TolQ/ExbB proton channel family JVX96_24130 PF02472 Biopolymer transport protein ExbD/TolR JVX96_24140 PF03928 Haem-degrading JVX96_24145 PF01027 Inhibitor of apoptosis-promoting Bax1 JVX96_24150 PF05958 tRNA (Uracil-5-)-methyltransferase JVX96_24155 PF04539 Sigma-70 region 3 JVX96_24155 PF04545 Sigma-70, region 4 JVX96_24155 PF00140 Sigma-70 factor, region 1.2 JVX96_24155 PF04542 Sigma-70 region 2 JVX96_24160 PF01551 Peptidase family M23 JVX96_24160 PF01476 LysM domain JVX96_24170 PF01975 Survival protein SurE JVX96_24175 PF00107 Zinc-binding dehydrogenase JVX96_24175 PF14765 Polyketide synthase dehydratase JVX96_24175 PF16197 Ketoacyl-synthetase C-terminal extension JVX96_24175 PF08240 Alcohol dehydrogenase GroES-like domain JVX96_24175 PF00109 Beta-ketoacyl synthase, N-terminal domain JVX96_24175 PF00550 Phosphopantetheine attachment site JVX96_24175 PF08659 KR domain JVX96_24175 PF00698 Acyl transferase domain JVX96_24175 PF02801 Beta-ketoacyl synthase, C-terminal domain JVX96_24185 PF10137 Predicted nucleotide-binding protein containing TIR-like domain JVX96_24245 PF01381 Helix-turn-helix JVX96_24250 PF07963 Prokaryotic N-terminal methylation motif JVX96_24250 PF00114 Pilin (bacterial filament) JVX96_24255 PF07963 Prokaryotic N-terminal methylation motif JVX96_24255 PF00114 Pilin (bacterial filament) JVX96_24455 PF13391 HNH endonuclease JVX96_24470 PF01555 DNA methylase JVX96_24605 PF00216 Bacterial DNA-binding protein JVX96_24610 PF00180 Isocitrate/isopropylmalate dehydrogenase JVX96_24615 PF00561 alpha/beta hydrolase fold JVX96_24620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_24620 PF03466 LysR substrate binding domain JVX96_24630 PF01066 CDP-alcohol phosphatidyltransferase JVX96_24635 PF01541 GIY-YIG catalytic domain JVX96_24635 PF02151 UvrB/uvrC motif JVX96_24635 PF08459 UvrC Helix-hairpin-helix N-terminal JVX96_24655 PF09285 Elongation factor P, C-terminal JVX96_24655 PF08207 Elongation factor P (EF-P) KOW-like domain JVX96_24655 PF01132 Elongation factor P (EF-P) OB domain JVX96_24660 PF03641 Possible lysine decarboxylase JVX96_24670 PF02646 RmuC family JVX96_24675 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JVX96_24675 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JVX96_24685 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family JVX96_24685 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain JVX96_24690 PF05532 CsbD-like JVX96_24705 PF00850 Histone deacetylase domain JVX96_24710 PF09361 Phasin protein JVX96_24715 PF00106 short chain dehydrogenase JVX96_24720 PF03631 Virulence factor BrkB JVX96_24725 PF10410 DnaB-helicase binding domain of primase JVX96_24725 PF08278 DNA primase DnaG DnaB-binding JVX96_24725 PF08275 DNA primase catalytic core, N-terminal domain JVX96_24725 PF01807 CHC2 zinc finger JVX96_24730 PF00140 Sigma-70 factor, region 1.2 JVX96_24730 PF04542 Sigma-70 region 2 JVX96_24730 PF04539 Sigma-70 region 3 JVX96_24730 PF04545 Sigma-70, region 4 JVX96_24730 PF04546 Sigma-70, non-essential region JVX96_24730 PF03979 Sigma-70 factor, region 1.1 JVX96_24735 PF07690 Major Facilitator Superfamily JVX96_24745 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_24750 PF02515 CoA-transferase family III JVX96_24755 PF00682 HMGL-like JVX96_24760 PF03466 LysR substrate binding domain JVX96_24760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_24775 PF00005 ABC transporter JVX96_24780 PF12399 Branched-chain amino acid ATP-binding cassette transporter JVX96_24780 PF00005 ABC transporter JVX96_24795 PF13458 Periplasmic binding protein JVX96_24800 PF00111 2Fe-2S iron-sulfur cluster binding domain JVX96_24800 PF00970 Oxidoreductase FAD-binding domain JVX96_24805 PF07729 FCD domain JVX96_24805 PF00392 Bacterial regulatory proteins, gntR family JVX96_24810 PF00355 Rieske [2Fe-2S] domain JVX96_24815 PF01717 Cobalamin-independent synthase, Catalytic domain JVX96_24820 PF13417 Glutathione S-transferase, N-terminal domain JVX96_24825 PF13396 Phospholipase_D-nuclease N-terminal JVX96_24825 PF13091 PLD-like domain JVX96_24840 PF00528 Binding-protein-dependent transport system inner membrane component JVX96_24850 PF00171 Aldehyde dehydrogenase family JVX96_24855 PF13378 Enolase C-terminal domain-like JVX96_24855 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JVX96_24860 PF00701 Dihydrodipicolinate synthetase family JVX96_24865 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_24870 PF07729 FCD domain JVX96_24870 PF00392 Bacterial regulatory proteins, gntR family JVX96_24875 PF01370 NAD dependent epimerase/dehydratase family JVX96_24880 PF08450 SMP-30/Gluconolactonase/LRE-like region JVX96_24885 PF03480 Bacterial extracellular solute-binding protein, family 7 JVX96_24890 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component JVX96_24895 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component JVX96_24900 PF08666 SAF domain JVX96_24900 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus JVX96_24915 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_24920 PF02666 Phosphatidylserine decarboxylase JVX96_24930 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JVX96_24935 PF01025 GrpE JVX96_24940 PF00012 Hsp70 protein JVX96_24945 PF00226 DnaJ domain JVX96_24945 PF01556 DnaJ C terminal domain JVX96_24945 PF00684 DnaJ central domain JVX96_24950 PF08298 PrkA AAA domain JVX96_24950 PF06798 PrkA serine protein kinase C-terminal domain JVX96_24955 PF04285 Protein of unknown function (DUF444) JVX96_24960 PF04293 SpoVR like protein JVX96_24965 PF01220 Dehydroquinase class II JVX96_24990 PF02798 Glutathione S-transferase, N-terminal domain JVX96_24995 PF08240 Alcohol dehydrogenase GroES-like domain JVX96_24995 PF00107 Zinc-binding dehydrogenase JVX96_25000 PF00561 alpha/beta hydrolase fold JVX96_25005 PF00756 Putative esterase JVX96_25015 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JVX96_25020 PF04993 TfoX N-terminal domain JVX96_25020 PF04994 TfoX C-terminal domain JVX96_25040 PF02040 Arsenical pump membrane protein JVX96_25045 PF03960 ArsC family JVX96_25050 PF03358 NADPH-dependent FMN reductase JVX96_25060 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JVX96_25060 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain JVX96_25080 PF00873 AcrB/AcrD/AcrF family JVX96_25085 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JVX96_25085 PF00529 HlyD membrane-fusion protein of T1SS JVX96_25090 PF02321 Outer membrane efflux protein JVX96_25095 PF00266 Aminotransferase class-V JVX96_25100 PF01037 Lrp/AsnC ligand binding domain JVX96_25105 PF04055 Radical SAM superfamily JVX96_25120 PF08241 Methyltransferase domain JVX96_25160 PF03466 LysR substrate binding domain JVX96_25160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_25165 PF00962 Adenosine/AMP deaminase JVX96_25170 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_25180 PF01053 Cys/Met metabolism PLP-dependent enzyme JVX96_25185 PF00561 alpha/beta hydrolase fold JVX96_25185 PF08386 TAP-like protein JVX96_25190 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_25195 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_25205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_25205 PF03466 LysR substrate binding domain JVX96_25215 PF00085 Thioredoxin JVX96_25225 PF03631 Virulence factor BrkB JVX96_25235 PF01565 FAD binding domain JVX96_25235 PF02913 FAD linked oxidases, C-terminal domain JVX96_25240 PF00303 Thymidylate synthase JVX96_25245 PF00186 Dihydrofolate reductase JVX96_25260 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain JVX96_25260 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase JVX96_25265 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 JVX96_25270 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath JVX96_25295 PF00004 ATPase family associated with various cellular activities (AAA) JVX96_25295 PF10431 C-terminal, D2-small domain, of ClpB protein JVX96_25295 PF17871 AAA lid domain JVX96_25295 PF07724 AAA domain (Cdc48 subfamily) JVX96_25300 PF06715 Gp5 C-terminal repeat (3 copies) JVX96_25300 PF04717 Type VI secretion system, phage-baseplate injector JVX96_25325 PF00375 Sodium:dicarboxylate symporter family JVX96_25335 PF00375 Sodium:dicarboxylate symporter family JVX96_25375 PF07715 TonB-dependent Receptor Plug Domain JVX96_25375 PF00593 TonB dependent receptor JVX96_25390 PF00072 Response regulator receiver domain JVX96_25390 PF00196 Bacterial regulatory proteins, luxR family JVX96_25395 PF00072 Response regulator receiver domain JVX96_25395 PF00486 Transcriptional regulatory protein, C terminal JVX96_25400 PF00512 His Kinase A (phospho-acceptor) domain JVX96_25400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JVX96_25400 PF00672 HAMP domain JVX96_25405 PF13609 Gram-negative porin JVX96_25415 PF00072 Response regulator receiver domain JVX96_25415 PF00486 Transcriptional regulatory protein, C terminal JVX96_25420 PF04453 LPS transport system D JVX96_25425 PF00497 Bacterial extracellular solute-binding proteins, family 3 JVX96_25430 PF00005 ABC transporter JVX96_25435 PF00528 Binding-protein-dependent transport system inner membrane component JVX96_25440 PF00528 Binding-protein-dependent transport system inner membrane component JVX96_25445 PF00106 short chain dehydrogenase JVX96_25450 PF03746 LamB/YcsF family JVX96_25460 PF02626 Carboxyltransferase domain, subdomain A and B JVX96_25465 PF02682 Carboxyltransferase domain, subdomain C and D JVX96_25470 PF02785 Biotin carboxylase C-terminal domain JVX96_25470 PF00289 Biotin carboxylase, N-terminal domain JVX96_25470 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JVX96_25475 PF00364 Biotin-requiring enzyme JVX96_25480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_25480 PF03466 LysR substrate binding domain JVX96_25485 PF00155 Aminotransferase class I and II JVX96_25490 PF03737 Aldolase/RraA JVX96_25495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_25495 PF03466 LysR substrate binding domain JVX96_25500 PF00701 Dihydrodipicolinate synthetase family JVX96_25505 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_25515 PF13378 Enolase C-terminal domain-like JVX96_25520 PF03372 Endonuclease/Exonuclease/phosphatase family JVX96_25530 PF00072 Response regulator receiver domain JVX96_25530 PF02954 Bacterial regulatory protein, Fis family JVX96_25530 PF00158 Sigma-54 interaction domain JVX96_25535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JVX96_25535 PF00512 His Kinase A (phospho-acceptor) domain JVX96_25535 PF00989 PAS fold JVX96_25545 PF03951 Glutamine synthetase, beta-Grasp domain JVX96_25545 PF00120 Glutamine synthetase, catalytic domain JVX96_25550 PF02464 Competence-damaged protein JVX96_25550 PF00994 Probable molybdopterin binding domain JVX96_25550 PF18146 Damage-inducible protein CinA KH domain JVX96_25575 PF01479 S4 domain JVX96_25575 PF00849 RNA pseudouridylate synthase JVX96_25585 PF10119 Predicted methyltransferase regulatory domain JVX96_25585 PF13847 Methyltransferase domain JVX96_25610 PF00216 Bacterial DNA-binding protein JVX96_25630 PF00749 tRNA synthetases class I (E and Q), catalytic domain JVX96_25635 PF01053 Cys/Met metabolism PLP-dependent enzyme JVX96_25640 PF00156 Phosphoribosyl transferase domain JVX96_25655 PF02875 Mur ligase family, glutamate ligase domain JVX96_25655 PF08245 Mur ligase middle domain JVX96_25660 PF03960 ArsC family JVX96_25670 PF06865 Pyrimidine/purine nucleoside phosphorylase JVX96_25675 PF00764 Arginosuccinate synthase JVX96_25685 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain JVX96_25685 PF01565 FAD binding domain JVX96_25690 PF04461 Protein of unknown function (DUF520) JVX96_25700 PF01042 Endoribonuclease L-PSP JVX96_25705 PF02660 Glycerol-3-phosphate acyltransferase JVX96_25710 PF04073 Aminoacyl-tRNA editing domain JVX96_25715 PF00248 Aldo/keto reductase family JVX96_25720 PF00561 alpha/beta hydrolase fold JVX96_25725 PF00248 Aldo/keto reductase family JVX96_25730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_25730 PF03466 LysR substrate binding domain JVX96_25735 PF03180 NLPA lipoprotein JVX96_25740 PF00296 Luciferase-like monooxygenase JVX96_25750 PF03180 NLPA lipoprotein JVX96_25755 PF00528 Binding-protein-dependent transport system inner membrane component JVX96_25760 PF09383 NIL domain JVX96_25760 PF00005 ABC transporter JVX96_25765 PF03180 NLPA lipoprotein JVX96_25775 PF13419 Haloacid dehalogenase-like hydrolase JVX96_25780 PF17432 Domain of unknown function (DUF3458_C) ARM repeats JVX96_25780 PF11940 Domain of unknown function (DUF3458) Ig-like fold JVX96_25780 PF01433 Peptidase family M1 domain JVX96_25785 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain JVX96_25815 PF03527 RHS protein JVX96_25815 PF05593 RHS Repeat JVX96_25830 PF06715 Gp5 C-terminal repeat (3 copies) JVX96_25830 PF04717 Type VI secretion system, phage-baseplate injector JVX96_25840 PF02146 Sir2 family JVX96_25845 PF01515 Phosphate acetyl/butaryl transferase JVX96_25855 PF02653 Branched-chain amino acid transport system / permease component JVX96_25860 PF00005 ABC transporter JVX96_25865 PF13407 Periplasmic binding protein domain JVX96_25870 PF02653 Branched-chain amino acid transport system / permease component JVX96_25875 PF00294 pfkB family carbohydrate kinase JVX96_25875 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) JVX96_25880 PF05025 RbsD / FucU transport protein family JVX96_25885 PF00171 Aldehyde dehydrogenase family JVX96_25890 PF01791 DeoC/LacD family aldolase JVX96_25895 PF00455 DeoR C terminal sensor domain JVX96_25895 PF08220 DeoR-like helix-turn-helix domain JVX96_25900 PF13404 AsnC-type helix-turn-helix domain JVX96_25900 PF01037 Lrp/AsnC ligand binding domain JVX96_25915 PF04976 DMSO reductase anchor subunit (DmsC) JVX96_25920 PF13247 4Fe-4S dicluster domain JVX96_25920 PF12800 4Fe-4S binding domain JVX96_25925 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JVX96_25925 PF01568 Molydopterin dinucleotide binding domain JVX96_25925 PF00384 Molybdopterin oxidoreductase JVX96_25930 PF03466 LysR substrate binding domain JVX96_25930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_25935 PF00871 Acetokinase family JVX96_25940 PF00205 Thiamine pyrophosphate enzyme, central domain JVX96_25940 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JVX96_25940 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JVX96_25945 PF01614 Bacterial transcriptional regulator JVX96_25945 PF09339 IclR helix-turn-helix domain JVX96_25950 PF07728 AAA domain (dynein-related subfamily) JVX96_25950 PF08406 CbbQ/NirQ/NorQ C-terminal JVX96_25950 PF12556 Cobaltochelatase CobS subunit N terminal JVX96_25955 PF06213 Cobalamin biosynthesis protein CobT JVX96_25955 PF11775 Cobalamin biosynthesis protein CobT VWA domain JVX96_25975 PF09339 IclR helix-turn-helix domain JVX96_25975 PF01614 Bacterial transcriptional regulator JVX96_25980 PF00732 GMC oxidoreductase JVX96_25980 PF05199 GMC oxidoreductase JVX96_25985 PF07690 Major Facilitator Superfamily JVX96_25985 PF00083 Sugar (and other) transporter JVX96_25990 PF00196 Bacterial regulatory proteins, luxR family JVX96_25990 PF03472 Autoinducer binding domain JVX96_26000 PF12951 Passenger-associated-transport-repeat JVX96_26025 PF00563 EAL domain JVX96_26025 PF03707 Bacterial signalling protein N terminal repeat JVX96_26025 PF00990 Diguanylate cyclase, GGDEF domain JVX96_26040 PF01209 ubiE/COQ5 methyltransferase family JVX96_26045 PF16925 Tetracyclin repressor-like, C-terminal domain JVX96_26045 PF00440 Bacterial regulatory proteins, tetR family JVX96_26050 PF00732 GMC oxidoreductase JVX96_26050 PF05199 GMC oxidoreductase JVX96_26055 PF02515 CoA-transferase family III JVX96_26060 PF00378 Enoyl-CoA hydratase/isomerase JVX96_26065 PF08240 Alcohol dehydrogenase GroES-like domain JVX96_26065 PF00107 Zinc-binding dehydrogenase JVX96_26070 PF16867 Dimethlysulfonioproprionate lyase JVX96_26085 PF00717 Peptidase S24-like JVX96_26085 PF01726 LexA DNA binding domain JVX96_26105 PF01272 Transcription elongation factor, GreA/GreB, C-term JVX96_26105 PF03449 Transcription elongation factor, N-terminal JVX96_26110 PF00196 Bacterial regulatory proteins, luxR family JVX96_26110 PF00072 Response regulator receiver domain JVX96_26115 PF17200 Single Cache domain 2 JVX96_26115 PF07730 Histidine kinase JVX96_26125 PF07690 Major Facilitator Superfamily JVX96_26135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JVX96_26135 PF00512 His Kinase A (phospho-acceptor) domain JVX96_26135 PF00672 HAMP domain JVX96_26140 PF00486 Transcriptional regulatory protein, C terminal JVX96_26140 PF00072 Response regulator receiver domain JVX96_26145 PF00873 AcrB/AcrD/AcrF family JVX96_26150 PF13533 Biotin-lipoyl like JVX96_26155 PF08139 Prokaryotic membrane lipoprotein lipid attachment site JVX96_26155 PF02321 Outer membrane efflux protein JVX96_26160 PF00248 Aldo/keto reductase family JVX96_26165 PF09423 PhoD-like phosphatase JVX96_26165 PF16655 PhoD-like phosphatase, N-terminal domain JVX96_26170 PF07690 Major Facilitator Superfamily JVX96_26175 PF00005 ABC transporter JVX96_26180 PF00005 ABC transporter JVX96_26180 PF12399 Branched-chain amino acid ATP-binding cassette transporter JVX96_26185 PF02653 Branched-chain amino acid transport system / permease component JVX96_26190 PF02653 Branched-chain amino acid transport system / permease component JVX96_26215 PF03976 Polyphosphate kinase 2 (PPK2) JVX96_26220 PF01384 Phosphate transporter family JVX96_26230 PF02811 PHP domain JVX96_26240 PF01300 Telomere recombination JVX96_26245 PF02163 Peptidase family M50 JVX96_26250 PF00579 tRNA synthetases class I (W and Y) JVX96_26255 PF00196 Bacterial regulatory proteins, luxR family JVX96_26255 PF00072 Response regulator receiver domain JVX96_26260 PF00512 His Kinase A (phospho-acceptor) domain JVX96_26260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JVX96_26260 PF00672 HAMP domain JVX96_26260 PF00989 PAS fold JVX96_26260 PF18698 Histidine kinase sensor domain JVX96_26265 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV JVX96_26270 PF01134 Glucose inhibited division protein A JVX96_26270 PF13932 GidA associated domain JVX96_26275 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_26280 PF03466 LysR substrate binding domain JVX96_26280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_26285 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JVX96_26285 PF00356 Bacterial regulatory proteins, lacI family JVX96_26290 PF08240 Alcohol dehydrogenase GroES-like domain JVX96_26290 PF00107 Zinc-binding dehydrogenase JVX96_26295 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JVX96_26295 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JVX96_26310 PF00723 Glycosyl hydrolases family 15 JVX96_26315 PF04542 Sigma-70 region 2 JVX96_26315 PF04545 Sigma-70, region 4 JVX96_26315 PF04539 Sigma-70 region 3 JVX96_26325 PF00448 SRP54-type protein, GTPase domain JVX96_26330 PF00771 FHIPEP family JVX96_26335 PF01312 FlhB HrpN YscU SpaS Family JVX96_26340 PF04344 Chemotaxis phosphatase, CheZ JVX96_26345 PF00072 Response regulator receiver domain JVX96_26350 PF00072 Response regulator receiver domain JVX96_26350 PF01339 CheB methylesterase JVX96_26355 PF03975 CheD chemotactic sensory transduction JVX96_26360 PF03705 CheR methyltransferase, all-alpha domain JVX96_26360 PF01739 CheR methyltransferase, SAM binding domain JVX96_26365 PF08668 HDOD domain JVX96_26365 PF00563 EAL domain JVX96_26370 PF02895 Signal transducing histidine kinase, homodimeric domain JVX96_26370 PF09078 CheY binding JVX96_26370 PF01584 CheW-like domain JVX96_26370 PF01627 Hpt domain JVX96_26370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JVX96_26375 PF00691 OmpA family JVX96_26375 PF13677 Membrane MotB of proton-channel complex MotA/MotB JVX96_26380 PF01618 MotA/TolQ/ExbB proton channel family JVX96_26385 PF05280 Flagellar transcriptional activator (FlhC) JVX96_26390 PF05247 Flagellar transcriptional activator (FlhD) JVX96_26395 PF01312 FlhB HrpN YscU SpaS Family JVX96_26410 PF02561 Flagellar protein FliS JVX96_26415 PF02465 Flagellar hook-associated protein 2 N-terminus JVX96_26415 PF07195 Flagellar hook-associated protein 2 C-terminus JVX96_26420 PF03646 FlaG protein JVX96_26425 PF00700 Bacterial flagellin C-terminal helical region JVX96_26425 PF08884 Flagellin D3 domain JVX96_26425 PF00669 Bacterial flagellin N-terminal helical region JVX96_26430 PF02049 Flagellar hook-basal body complex protein FliE JVX96_26435 PF01514 Secretory protein of YscJ/FliF family JVX96_26435 PF08345 Flagellar M-ring protein C-terminal JVX96_26440 PF01706 FliG C-terminal domain JVX96_26440 PF14841 FliG middle domain JVX96_26440 PF14842 FliG N-terminal domain JVX96_26445 PF02108 Flagellar assembly protein FliH JVX96_26450 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JVX96_26450 PF18269 T3SS EscN ATPase C-terminal domain JVX96_26455 PF02050 Flagellar FliJ protein JVX96_26465 PF03748 Flagellar basal body-associated protein FliL JVX96_26470 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term JVX96_26470 PF02154 Flagellar motor switch protein FliM JVX96_26475 PF16973 Flagellar motor switch protein FliN N-terminal JVX96_26475 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term JVX96_26480 PF04347 Flagellar biosynthesis protein, FliO JVX96_26485 PF00813 FliP family JVX96_26490 PF01313 Bacterial export proteins, family 3 JVX96_26495 PF01311 Bacterial export proteins, family 1 JVX96_26500 PF00793 DAHP synthetase I family JVX96_26505 PF00669 Bacterial flagellin N-terminal helical region JVX96_26510 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JVX96_26510 PF00460 Flagella basal body rod protein JVX96_26515 PF02203 Tar ligand binding domain homologue JVX96_26515 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JVX96_26515 PF00672 HAMP domain JVX96_26520 PF02203 Tar ligand binding domain homologue JVX96_26520 PF00672 HAMP domain JVX96_26520 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JVX96_26525 PF02203 Tar ligand binding domain homologue JVX96_26525 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JVX96_26525 PF00672 HAMP domain JVX96_26530 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JVX96_26530 PF00672 HAMP domain JVX96_26530 PF02203 Tar ligand binding domain homologue JVX96_26535 PF01584 CheW-like domain JVX96_26540 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JVX96_26540 PF08447 PAS fold JVX96_26545 PF00672 HAMP domain JVX96_26545 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JVX96_26545 PF02203 Tar ligand binding domain homologue JVX96_26550 PF00672 HAMP domain JVX96_26550 PF02203 Tar ligand binding domain homologue JVX96_26550 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JVX96_26560 PF02203 Tar ligand binding domain homologue JVX96_26560 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JVX96_26560 PF00672 HAMP domain JVX96_26565 PF01584 CheW-like domain JVX96_26570 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase JVX96_26570 PF10135 Rod binding protein JVX96_26575 PF02119 Flagellar P-ring protein JVX96_26580 PF02107 Flagellar L-ring protein JVX96_26585 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JVX96_26585 PF00460 Flagella basal body rod protein JVX96_26590 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JVX96_26590 PF00460 Flagella basal body rod protein JVX96_26595 PF07559 Flagellar basal body protein FlaE JVX96_26595 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JVX96_26595 PF00460 Flagella basal body rod protein JVX96_26600 PF13860 FlgD Ig-like domain JVX96_26600 PF03963 Flagellar hook capping protein - N-terminal region JVX96_26600 PF13861 FlgD Tudor-like domain JVX96_26605 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JVX96_26605 PF00460 Flagella basal body rod protein JVX96_26610 PF00460 Flagella basal body rod protein JVX96_26640 PF02403 Seryl-tRNA synthetase N-terminal domain JVX96_26640 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JVX96_26645 PF00291 Pyridoxal-phosphate dependent enzyme JVX96_26650 PF02401 LytB protein JVX96_26655 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JVX96_26660 PF04002 RadC-like JAB domain JVX96_26665 PF01713 Smr domain JVX96_26670 PF02872 5'-nucleotidase, C-terminal domain JVX96_26670 PF00149 Calcineurin-like phosphoesterase JVX96_26675 PF07992 Pyridine nucleotide-disulphide oxidoreductase JVX96_26675 PF14759 Reductase C-terminal JVX96_26685 PF12241 Trans-2-enoyl-CoA reductase catalytic region JVX96_26685 PF07055 Enoyl reductase FAD binding domain JVX96_26685 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase JVX96_26690 PF00497 Bacterial extracellular solute-binding proteins, family 3 JVX96_26695 PF00528 Binding-protein-dependent transport system inner membrane component JVX96_26700 PF00528 Binding-protein-dependent transport system inner membrane component JVX96_26705 PF00005 ABC transporter JVX96_26710 PF03171 2OG-Fe(II) oxygenase superfamily JVX96_26710 PF14226 non-haem dioxygenase in morphine synthesis N-terminal JVX96_26720 PF13419 Haloacid dehalogenase-like hydrolase JVX96_26725 PF00083 Sugar (and other) transporter JVX96_26725 PF07690 Major Facilitator Superfamily JVX96_26730 PF00116 Cytochrome C oxidase subunit II, periplasmic domain JVX96_26730 PF06481 COX Aromatic Rich Motif JVX96_26735 PF00115 Cytochrome C and Quinol oxidase polypeptide I JVX96_26740 PF00510 Cytochrome c oxidase subunit III JVX96_26745 PF03626 Prokaryotic Cytochrome C oxidase subunit IV JVX96_26760 PF00072 Response regulator receiver domain JVX96_26765 PF03006 Haemolysin-III related JVX96_26770 PF04102 SlyX JVX96_26775 PF07690 Major Facilitator Superfamily JVX96_26780 PF03466 LysR substrate binding domain JVX96_26780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_26815 PF13247 4Fe-4S dicluster domain JVX96_26815 PF12800 4Fe-4S binding domain JVX96_26815 PF09163 Formate dehydrogenase N, transmembrane JVX96_26820 PF01292 Prokaryotic cytochrome b561 JVX96_26825 PF04216 Protein involved in formate dehydrogenase formation JVX96_26830 PF12390 Selenocysteine synthase N terminal JVX96_26830 PF03841 L-seryl-tRNA selenium transferase JVX96_26835 PF09107 Elongation factor SelB, winged helix JVX96_26835 PF03144 Elongation factor Tu domain 2 JVX96_26835 PF00009 Elongation factor Tu GTP binding domain JVX96_26835 PF09106 Elongation factor SelB, winged helix JVX96_26845 PF00586 AIR synthase related protein, N-terminal domain JVX96_26845 PF02769 AIR synthase related protein, C-terminal domain JVX96_26855 PF00005 ABC transporter JVX96_26860 PF00528 Binding-protein-dependent transport system inner membrane component JVX96_26865 PF00528 Binding-protein-dependent transport system inner membrane component JVX96_26870 PF00581 Rhodanese-like domain JVX96_26900 PF05860 haemagglutination activity domain JVX96_26900 PF13332 Hemagglutinin repeat JVX96_26900 PF13018 Extended Signal Peptide of Type V secretion system JVX96_26900 PF04829 Pre-toxin domain with VENN motif JVX96_26910 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB JVX96_26910 PF17287 POTRA domain JVX96_26910 PF08479 POTRA domain, ShlB-type JVX96_26915 PF02634 FdhD/NarQ family JVX96_26925 PF00384 Molybdopterin oxidoreductase JVX96_26930 PF03459 TOBE domain JVX96_26930 PF00005 ABC transporter JVX96_26940 PF00528 Binding-protein-dependent transport system inner membrane component JVX96_26950 PF03459 TOBE domain JVX96_26950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_26955 PF07690 Major Facilitator Superfamily JVX96_26960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_26960 PF03466 LysR substrate binding domain JVX96_26965 PF10609 NUBPL iron-transfer P-loop NTPase JVX96_26980 PF00291 Pyridoxal-phosphate dependent enzyme JVX96_26985 PF07687 Peptidase dimerisation domain JVX96_26985 PF01546 Peptidase family M20/M25/M40 JVX96_26990 PF01037 Lrp/AsnC ligand binding domain JVX96_26995 PF06736 Protein of unknown function (DUF1211) JVX96_27010 PF04337 Protein of unknown function, DUF480 JVX96_27015 PF00180 Isocitrate/isopropylmalate dehydrogenase JVX96_27015 PF18324 Hypothetical protein TT1725 JVX96_27030 PF09334 tRNA synthetases class I (M) JVX96_27030 PF01588 Putative tRNA binding domain JVX96_27035 PF00916 Sulfate permease family JVX96_27035 PF01740 STAS domain JVX96_27050 PF02616 Segregation and condensation protein ScpA JVX96_27055 PF02910 Fumarate reductase flavoprotein C-term JVX96_27055 PF00890 FAD binding domain JVX96_27060 PF02569 Pantoate-beta-alanine ligase JVX96_27070 PF01242 6-pyruvoyl tetrahydropterin synthase JVX96_27075 PF02445 Quinolinate synthetase A protein JVX96_27080 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain JVX96_27080 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain JVX96_27085 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus JVX96_27085 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus JVX96_27090 PF02556 Preprotein translocase subunit SecB JVX96_27095 PF00462 Glutaredoxin JVX96_27100 PF00581 Rhodanese-like domain JVX96_27105 PF00300 Histidine phosphatase superfamily (branch 1) JVX96_27110 PF13180 PDZ domain JVX96_27110 PF03572 Peptidase family S41 JVX96_27115 PF00899 ThiF family JVX96_27120 PF05170 AsmA family JVX96_27130 PF00196 Bacterial regulatory proteins, luxR family JVX96_27130 PF00072 Response regulator receiver domain JVX96_27135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JVX96_27135 PF05231 MASE1 JVX96_27135 PF07730 Histidine kinase JVX96_27165 PF04972 BON domain JVX96_27170 PF05532 CsbD-like JVX96_27180 PF00893 Small Multidrug Resistance protein JVX96_27190 PF01227 GTP cyclohydrolase I JVX96_27200 PF00293 NUDIX domain JVX96_27205 PF00152 tRNA synthetases class II (D, K and N) JVX96_27205 PF02938 GAD domain JVX96_27205 PF01336 OB-fold nucleic acid binding domain JVX96_27220 PF00474 Sodium:solute symporter family JVX96_27225 PF03109 ABC1 family JVX96_27240 PF01209 ubiE/COQ5 methyltransferase family JVX96_27260 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JVX96_27260 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JVX96_27265 PF13416 Bacterial extracellular solute-binding protein JVX96_27270 PF00528 Binding-protein-dependent transport system inner membrane component JVX96_27275 PF00528 Binding-protein-dependent transport system inner membrane component JVX96_27280 PF00005 ABC transporter JVX96_27280 PF17912 MalK OB fold domain JVX96_27285 PF03009 Glycerophosphoryl diester phosphodiesterase family JVX96_27290 PF12794 Mechanosensitive ion channel inner membrane domain 1 JVX96_27290 PF00924 Mechanosensitive ion channel JVX96_27290 PF12795 Mechanosensitive ion channel porin domain JVX96_27295 PF01037 Lrp/AsnC ligand binding domain JVX96_27305 PF02653 Branched-chain amino acid transport system / permease component JVX96_27310 PF00005 ABC transporter JVX96_27325 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain JVX96_27325 PF01488 Shikimate / quinate 5-dehydrogenase JVX96_27325 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain JVX96_27330 PF03462 PCRF domain JVX96_27330 PF00472 RF-1 domain JVX96_27335 PF05175 Methyltransferase small domain JVX96_27335 PF17827 PrmC N-terminal domain JVX96_27340 PF00462 Glutaredoxin JVX96_27350 PF01595 Cyclin M transmembrane N-terminal domain JVX96_27350 PF03471 Transporter associated domain JVX96_27350 PF00571 CBS domain JVX96_27355 PF01464 Transglycosylase SLT domain JVX96_27355 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain JVX96_27360 PF04073 Aminoacyl-tRNA editing domain JVX96_27360 PF03129 Anticodon binding domain JVX96_27360 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JVX96_27365 PF00293 NUDIX domain JVX96_27375 PF01472 PUA domain JVX96_27375 PF00696 Amino acid kinase family JVX96_27380 PF01926 50S ribosome-binding GTPase JVX96_27380 PF01018 GTP1/OBG JVX96_27385 PF01016 Ribosomal L27 protein JVX96_27390 PF00829 Ribosomal prokaryotic L21 protein JVX96_27395 PF00348 Polyprenyl synthetase JVX96_27405 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain JVX96_27405 PF00437 Type II/IV secretion system protein JVX96_27410 PF00482 Type II secretion system (T2SS), protein F JVX96_27415 PF01478 Type IV leader peptidase family JVX96_27415 PF06750 Bacterial Peptidase A24 N-terminal domain JVX96_27420 PF01121 Dephospho-CoA kinase JVX96_27425 PF03062 MBOAT, membrane-bound O-acyltransferase family JVX96_27435 PF07072 Cell division protein JVX96_27440 PF03884 DNA gyrase inhibitor YacG JVX96_27445 PF01757 Acyltransferase family JVX96_27450 PF01757 Acyltransferase family JVX96_27455 PF00293 NUDIX domain JVX96_27465 PF01960 ArgJ family JVX96_27470 PF02810 SEC-C motif JVX96_27470 PF01043 SecA preprotein cross-linking domain JVX96_27470 PF07517 SecA DEAD-like domain JVX96_27470 PF07516 SecA Wing and Scaffold domain JVX96_27480 PF02423 Ornithine cyclodeaminase/mu-crystallin family JVX96_27485 PF00291 Pyridoxal-phosphate dependent enzyme JVX96_27490 PF13309 HTH domain JVX96_27490 PF08348 YheO-like PAS domain JVX96_27500 PF03466 LysR substrate binding domain JVX96_27500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_27510 PF00072 Response regulator receiver domain JVX96_27515 PF00072 Response regulator receiver domain JVX96_27515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JVX96_27515 PF00512 His Kinase A (phospho-acceptor) domain JVX96_27515 PF01627 Hpt domain JVX96_27520 PF00547 Urease, gamma subunit JVX96_27530 PF00699 Urease beta subunit JVX96_27535 PF00449 Urease alpha-subunit, N-terminal domain JVX96_27535 PF01979 Amidohydrolase family JVX96_27540 PF02814 UreE urease accessory protein, N-terminal domain JVX96_27540 PF05194 UreE urease accessory protein, C-terminal domain JVX96_27545 PF01730 UreF JVX96_27550 PF02492 CobW/HypB/UreG, nucleotide-binding domain JVX96_27570 PF00484 Carbonic anhydrase JVX96_27580 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_27590 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JVX96_27590 PF02770 Acyl-CoA dehydrogenase, middle domain JVX96_27590 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JVX96_27595 PF02515 CoA-transferase family III JVX96_27600 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_27610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_27610 PF03466 LysR substrate binding domain JVX96_27615 PF00296 Luciferase-like monooxygenase JVX96_27620 PF01613 Flavin reductase like domain JVX96_27625 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JVX96_27625 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JVX96_27625 PF02770 Acyl-CoA dehydrogenase, middle domain JVX96_27635 PF00378 Enoyl-CoA hydratase/isomerase JVX96_27640 PF13380 CoA binding domain JVX96_27640 PF13607 Succinyl-CoA ligase like flavodoxin domain JVX96_27645 PF00106 short chain dehydrogenase JVX96_27655 PF13577 SnoaL-like domain JVX96_27665 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_27670 PF03466 LysR substrate binding domain JVX96_27670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_27685 PF00561 alpha/beta hydrolase fold JVX96_27690 PF00005 ABC transporter JVX96_27695 PF00528 Binding-protein-dependent transport system inner membrane component JVX96_27705 PF01494 FAD binding domain JVX96_27745 PF03707 Bacterial signalling protein N terminal repeat JVX96_27745 PF00990 Diguanylate cyclase, GGDEF domain JVX96_27745 PF00563 EAL domain JVX96_27755 PF00144 Beta-lactamase JVX96_27765 PF01596 O-methyltransferase JVX96_27770 PF00440 Bacterial regulatory proteins, tetR family JVX96_27785 PF01965 DJ-1/PfpI family JVX96_27785 PF12833 Helix-turn-helix domain JVX96_27835 PF02472 Biopolymer transport protein ExbD/TolR JVX96_27840 PF01618 MotA/TolQ/ExbB proton channel family JVX96_27895 PF00155 Aminotransferase class I and II JVX96_27895 PF00392 Bacterial regulatory proteins, gntR family JVX96_27900 PF00005 ABC transporter JVX96_27905 PF01546 Peptidase family M20/M25/M40 JVX96_27905 PF07687 Peptidase dimerisation domain JVX96_27910 PF04324 BFD-like [2Fe-2S] binding domain JVX96_27910 PF07992 Pyridine nucleotide-disulphide oxidoreductase JVX96_27915 PF00701 Dihydrodipicolinate synthetase family JVX96_27920 PF00497 Bacterial extracellular solute-binding proteins, family 3 JVX96_27925 PF00528 Binding-protein-dependent transport system inner membrane component JVX96_27930 PF01979 Amidohydrolase family JVX96_27930 PF00449 Urease alpha-subunit, N-terminal domain JVX96_27935 PF07729 FCD domain JVX96_27935 PF00392 Bacterial regulatory proteins, gntR family JVX96_27950 PF00330 Aconitase family (aconitate hydratase) JVX96_27960 PF02653 Branched-chain amino acid transport system / permease component JVX96_27970 PF00005 ABC transporter JVX96_27970 PF12399 Branched-chain amino acid ATP-binding cassette transporter JVX96_27975 PF00005 ABC transporter JVX96_27990 PF03466 LysR substrate binding domain JVX96_27990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_27995 PF02515 CoA-transferase family III JVX96_28000 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_28005 PF00561 alpha/beta hydrolase fold JVX96_28010 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component JVX96_28015 PF03480 Bacterial extracellular solute-binding protein, family 7 JVX96_28015 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component JVX96_28020 PF00501 AMP-binding enzyme JVX96_28020 PF13193 AMP-binding enzyme C-terminal domain JVX96_28025 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JVX96_28025 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JVX96_28045 PF03466 LysR substrate binding domain JVX96_28045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_28065 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_28070 PF01557 Fumarylacetoacetate (FAA) hydrolase family JVX96_28080 PF03358 NADPH-dependent FMN reductase JVX96_28085 PF00563 EAL domain JVX96_28085 PF00360 Phytochrome region JVX96_28085 PF01590 GAF domain JVX96_28085 PF00990 Diguanylate cyclase, GGDEF domain JVX96_28090 PF09339 IclR helix-turn-helix domain JVX96_28090 PF01614 Bacterial transcriptional regulator JVX96_28095 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_28100 PF04909 Amidohydrolase JVX96_28105 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_28110 PF03737 Aldolase/RraA JVX96_28115 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JVX96_28115 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JVX96_28120 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_28125 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_28130 PF04909 Amidohydrolase JVX96_28135 PF08450 SMP-30/Gluconolactonase/LRE-like region JVX96_28140 PF12951 Passenger-associated-transport-repeat JVX96_28140 PF00082 Subtilase family JVX96_28140 PF03797 Autotransporter beta-domain JVX96_28150 PF00529 HlyD membrane-fusion protein of T1SS JVX96_28150 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JVX96_28155 PF00873 AcrB/AcrD/AcrF family JVX96_28160 PF02321 Outer membrane efflux protein JVX96_28170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JVX96_28170 PF00512 His Kinase A (phospho-acceptor) domain JVX96_28170 PF16527 Two-component sensor protein CpxA, periplasmic domain JVX96_28170 PF00672 HAMP domain JVX96_28175 PF00072 Response regulator receiver domain JVX96_28175 PF00486 Transcriptional regulatory protein, C terminal JVX96_28180 PF02321 Outer membrane efflux protein JVX96_28190 PF00873 AcrB/AcrD/AcrF family JVX96_28205 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JVX96_28210 PF00005 ABC transporter JVX96_28210 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JVX96_28215 PF00528 Binding-protein-dependent transport system inner membrane component JVX96_28215 PF12911 N-terminal TM domain of oligopeptide transport permease C JVX96_28220 PF00528 Binding-protein-dependent transport system inner membrane component JVX96_28225 PF13454 FAD-NAD(P)-binding JVX96_28230 PF03466 LysR substrate binding domain JVX96_28230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_28250 PF01434 Peptidase family M41 JVX96_28250 PF17862 AAA+ lid domain JVX96_28250 PF00004 ATPase family associated with various cellular activities (AAA) JVX96_28265 PF00005 ABC transporter JVX96_28270 PF13533 Biotin-lipoyl like JVX96_28275 PF02321 Outer membrane efflux protein JVX96_28295 PF00591 Glycosyl transferase family, a/b domain JVX96_28295 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain JVX96_28295 PF02885 Glycosyl transferase family, helical bundle domain JVX96_28300 PF01814 Hemerythrin HHE cation binding domain JVX96_28355 PF02867 Ribonucleotide reductase, barrel domain JVX96_28355 PF00317 Ribonucleotide reductase, all-alpha domain JVX96_28355 PF03477 ATP cone domain JVX96_28375 PF13380 CoA binding domain JVX96_28375 PF00583 Acetyltransferase (GNAT) family JVX96_28375 PF13607 Succinyl-CoA ligase like flavodoxin domain JVX96_28385 PF00011 Hsp20/alpha crystallin family JVX96_28390 PF00850 Histone deacetylase domain JVX96_28395 PF00474 Sodium:solute symporter family JVX96_28400 PF04341 Protein of unknown function, DUF485 JVX96_28405 PF16177 Acetyl-coenzyme A synthetase N-terminus JVX96_28405 PF00501 AMP-binding enzyme JVX96_28405 PF13193 AMP-binding enzyme C-terminal domain JVX96_28425 PF14759 Reductase C-terminal JVX96_28425 PF07992 Pyridine nucleotide-disulphide oxidoreductase JVX96_28435 PF01355 High potential iron-sulfur protein JVX96_28450 PF13180 PDZ domain JVX96_28460 PF13180 PDZ domain JVX96_28465 PF01258 Prokaryotic dksA/traR C4-type zinc finger JVX96_28475 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus JVX96_28475 PF00561 alpha/beta hydrolase fold JVX96_28490 PF00582 Universal stress protein family JVX96_28510 PF01292 Prokaryotic cytochrome b561 JVX96_28530 PF00107 Zinc-binding dehydrogenase JVX96_28530 PF08240 Alcohol dehydrogenase GroES-like domain JVX96_28555 PF00753 Metallo-beta-lactamase superfamily JVX96_28565 PF04143 Sulphur transport JVX96_28575 PF00582 Universal stress protein family JVX96_28590 PF04972 BON domain JVX96_28595 PF00072 Response regulator receiver domain JVX96_28595 PF01339 CheB methylesterase JVX96_28610 PF09364 XFP N-terminal domain JVX96_28610 PF09363 XFP C-terminal domain JVX96_28610 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase JVX96_28625 PF00072 Response regulator receiver domain JVX96_28625 PF00486 Transcriptional regulatory protein, C terminal JVX96_28630 PF13426 PAS domain JVX96_28630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JVX96_28630 PF00072 Response regulator receiver domain JVX96_28635 PF13545 Crp-like helix-turn-helix domain JVX96_28635 PF00027 Cyclic nucleotide-binding domain JVX96_28640 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JVX96_28640 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JVX96_28655 PF08240 Alcohol dehydrogenase GroES-like domain JVX96_28655 PF00107 Zinc-binding dehydrogenase JVX96_28660 PF08240 Alcohol dehydrogenase GroES-like domain JVX96_28665 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain JVX96_28665 PF10996 Beta-Casp domain JVX96_28665 PF00753 Metallo-beta-lactamase superfamily JVX96_28675 PF06100 MCRA family JVX96_28700 PF00717 Peptidase S24-like JVX96_28700 PF01381 Helix-turn-helix JVX96_28715 PF04055 Radical SAM superfamily JVX96_28715 PF06969 HemN C-terminal domain JVX96_28730 PF12801 4Fe-4S binding domain JVX96_28730 PF13746 4Fe-4S dicluster domain JVX96_28730 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase JVX96_28735 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JVX96_28735 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP JVX96_28750 PF00115 Cytochrome C and Quinol oxidase polypeptide I JVX96_28760 PF00403 Heavy-metal-associated domain JVX96_28775 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JVX96_28775 PF13360 PQQ-like domain JVX96_28785 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component JVX96_28790 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component JVX96_28795 PF01220 Dehydroquinase class II JVX96_28800 PF03480 Bacterial extracellular solute-binding protein, family 7 JVX96_28810 PF03480 Bacterial extracellular solute-binding protein, family 7 JVX96_28815 PF16295 Tetracyclin repressor-like, C-terminal domain JVX96_28815 PF00440 Bacterial regulatory proteins, tetR family JVX96_28825 PF01740 STAS domain JVX96_28825 PF08678 Rsbr N terminal JVX96_28830 PF01740 STAS domain JVX96_28835 PF13581 Histidine kinase-like ATPase domain JVX96_28845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JVX96_28845 PF00072 Response regulator receiver domain JVX96_28845 PF09308 LuxQ, periplasmic JVX96_28845 PF00512 His Kinase A (phospho-acceptor) domain JVX96_28850 PF00512 His Kinase A (phospho-acceptor) domain JVX96_28850 PF00072 Response regulator receiver domain JVX96_28850 PF00989 PAS fold JVX96_28850 PF01627 Hpt domain JVX96_28850 PF18415 Histidine kinase receptor ArcB trans-membrane domain JVX96_28850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JVX96_28855 PF00205 Thiamine pyrophosphate enzyme, central domain JVX96_28855 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JVX96_28855 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JVX96_28860 PF01970 Tripartite tricarboxylate transporter TctA family JVX96_28870 PF01970 Tripartite tricarboxylate transporter TctA family JVX96_28875 PF07331 Tripartite tricarboxylate transporter TctB family JVX96_28880 PF00512 His Kinase A (phospho-acceptor) domain JVX96_28880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JVX96_28880 PF00672 HAMP domain JVX96_28885 PF00072 Response regulator receiver domain JVX96_28885 PF00486 Transcriptional regulatory protein, C terminal JVX96_28900 PF00270 DEAD/DEAH box helicase JVX96_28900 PF08494 DEAD/H associated JVX96_28900 PF00271 Helicase conserved C-terminal domain JVX96_28905 PF02308 MgtC family JVX96_28910 PF00171 Aldehyde dehydrogenase family JVX96_28915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_28915 PF03466 LysR substrate binding domain JVX96_28920 PF06250 YhcG PDDEXK nuclease domain JVX96_28920 PF17761 DUF1016 N-terminal domain JVX96_28945 PF00990 Diguanylate cyclase, GGDEF domain JVX96_28950 PF03707 Bacterial signalling protein N terminal repeat JVX96_28950 PF00990 Diguanylate cyclase, GGDEF domain JVX96_28950 PF00563 EAL domain JVX96_28955 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JVX96_28955 PF00205 Thiamine pyrophosphate enzyme, central domain JVX96_28955 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JVX96_28960 PF00528 Binding-protein-dependent transport system inner membrane component JVX96_28965 PF00005 ABC transporter JVX96_28975 PF03466 LysR substrate binding domain JVX96_28975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_28980 PF03466 LysR substrate binding domain JVX96_28980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_28985 PF05506 Domain of unknown function (DUF756) JVX96_28985 PF04185 Phosphoesterase family JVX96_29000 PF00171 Aldehyde dehydrogenase family JVX96_29005 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase JVX96_29010 PF07690 Major Facilitator Superfamily JVX96_29015 PF00465 Iron-containing alcohol dehydrogenase JVX96_29030 PF00005 ABC transporter JVX96_29030 PF00664 ABC transporter transmembrane region JVX96_29050 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) JVX96_29065 PF07660 Secretin and TonB N terminus short domain JVX96_29065 PF00593 TonB dependent receptor JVX96_29065 PF07715 TonB-dependent Receptor Plug Domain JVX96_29070 PF00550 Phosphopantetheine attachment site JVX96_29070 PF00668 Condensation domain JVX96_29070 PF13193 AMP-binding enzyme C-terminal domain JVX96_29070 PF00501 AMP-binding enzyme JVX96_29075 PF00975 Thioesterase domain JVX96_29075 PF00668 Condensation domain JVX96_29075 PF00550 Phosphopantetheine attachment site JVX96_29075 PF13193 AMP-binding enzyme C-terminal domain JVX96_29075 PF00501 AMP-binding enzyme JVX96_29080 PF00501 AMP-binding enzyme JVX96_29080 PF13193 AMP-binding enzyme C-terminal domain JVX96_29080 PF00668 Condensation domain JVX96_29080 PF07993 Male sterility protein JVX96_29080 PF00550 Phosphopantetheine attachment site JVX96_29085 PF00501 AMP-binding enzyme JVX96_29085 PF00668 Condensation domain JVX96_29085 PF00550 Phosphopantetheine attachment site JVX96_29085 PF13193 AMP-binding enzyme C-terminal domain JVX96_29090 PF00668 Condensation domain JVX96_29090 PF00698 Acyl transferase domain JVX96_29090 PF00550 Phosphopantetheine attachment site JVX96_29090 PF16197 Ketoacyl-synthetase C-terminal extension JVX96_29090 PF02801 Beta-ketoacyl synthase, C-terminal domain JVX96_29090 PF00109 Beta-ketoacyl synthase, N-terminal domain JVX96_29095 PF13193 AMP-binding enzyme C-terminal domain JVX96_29095 PF00501 AMP-binding enzyme JVX96_29095 PF00668 Condensation domain JVX96_29095 PF00550 Phosphopantetheine attachment site JVX96_29100 PF00975 Thioesterase domain JVX96_29105 PF03621 MbtH-like protein JVX96_29115 PF08281 Sigma-70, region 4 JVX96_29115 PF04542 Sigma-70 region 2 JVX96_29120 PF01804 Penicillin amidase JVX96_29140 PF00672 HAMP domain JVX96_29140 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JVX96_29140 PF02203 Tar ligand binding domain homologue JVX96_29145 PF00072 Response regulator receiver domain JVX96_29145 PF00196 Bacterial regulatory proteins, luxR family JVX96_29150 PF00512 His Kinase A (phospho-acceptor) domain JVX96_29150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JVX96_29160 PF00890 FAD binding domain JVX96_29170 PF01968 Hydantoinase/oxoprolinase JVX96_29170 PF05378 Hydantoinase/oxoprolinase N-terminal region JVX96_29175 PF02538 Hydantoinase B/oxoprolinase JVX96_29180 PF00694 Aconitase C-terminal domain JVX96_29185 PF00330 Aconitase family (aconitate hydratase) JVX96_29190 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_29195 PF00005 ABC transporter JVX96_29200 PF00005 ABC transporter JVX96_29200 PF12399 Branched-chain amino acid ATP-binding cassette transporter JVX96_29205 PF02653 Branched-chain amino acid transport system / permease component JVX96_29205 PF11862 Domain of unknown function (DUF3382) JVX96_29210 PF02653 Branched-chain amino acid transport system / permease component JVX96_29215 PF13458 Periplasmic binding protein JVX96_29220 PF00392 Bacterial regulatory proteins, gntR family JVX96_29220 PF07702 UTRA domain JVX96_29225 PF00934 PE family JVX96_29225 PF01436 NHL repeat JVX96_29230 PF00072 Response regulator receiver domain JVX96_29230 PF00158 Sigma-54 interaction domain JVX96_29230 PF02954 Bacterial regulatory protein, Fis family JVX96_29235 PF02743 Cache domain JVX96_29235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JVX96_29235 PF00512 His Kinase A (phospho-acceptor) domain JVX96_29240 PF00375 Sodium:dicarboxylate symporter family JVX96_29275 PF02567 Phenazine biosynthesis-like protein JVX96_29280 PF01817 Chorismate mutase type II JVX96_29280 PF01842 ACT domain JVX96_29280 PF00800 Prephenate dehydratase JVX96_29300 PF04002 RadC-like JAB domain JVX96_29305 PF13362 Toprim domain JVX96_29305 PF18818 Metallopeptidase superfamily domain JVX96_29305 PF08401 Domain of unknown function (DUF1738) JVX96_29310 PF07883 Cupin domain JVX96_29310 PF01381 Helix-turn-helix JVX96_29315 PF01381 Helix-turn-helix JVX96_29340 PF03466 LysR substrate binding domain JVX96_29340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_29345 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JVX96_29345 PF02770 Acyl-CoA dehydrogenase, middle domain JVX96_29345 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JVX96_29345 PF12806 Acetyl-CoA dehydrogenase C-terminal like JVX96_29355 PF00561 alpha/beta hydrolase fold JVX96_29360 PF01799 [2Fe-2S] binding domain JVX96_29360 PF00111 2Fe-2S iron-sulfur cluster binding domain JVX96_29365 PF00941 FAD binding domain in molybdopterin dehydrogenase JVX96_29365 PF03450 CO dehydrogenase flavoprotein C-terminal domain JVX96_29370 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain JVX96_29370 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase JVX96_29375 PF00355 Rieske [2Fe-2S] domain JVX96_29380 PF14759 Reductase C-terminal JVX96_29380 PF07992 Pyridine nucleotide-disulphide oxidoreductase JVX96_29385 PF00355 Rieske [2Fe-2S] domain JVX96_29385 PF00848 Ring hydroxylating alpha subunit (catalytic domain) JVX96_29405 PF00857 Isochorismatase family JVX96_29410 PF13458 Periplasmic binding protein JVX96_29415 PF02653 Branched-chain amino acid transport system / permease component JVX96_29425 PF12399 Branched-chain amino acid ATP-binding cassette transporter JVX96_29425 PF00005 ABC transporter JVX96_29430 PF08402 TOBE domain JVX96_29430 PF00005 ABC transporter JVX96_29435 PF07690 Major Facilitator Superfamily JVX96_29440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_29440 PF03466 LysR substrate binding domain JVX96_29450 PF01418 Helix-turn-helix domain, rpiR family JVX96_29450 PF01380 SIS domain JVX96_29450 PF02685 Glucokinase JVX96_29455 PF08546 Ketopantoate reductase PanE/ApbA C terminal JVX96_29455 PF02558 Ketopantoate reductase PanE/ApbA JVX96_29465 PF00378 Enoyl-CoA hydratase/isomerase JVX96_29470 PF02515 CoA-transferase family III JVX96_29480 PF02803 Thiolase, C-terminal domain JVX96_29480 PF00108 Thiolase, N-terminal domain JVX96_29490 PF04303 PrpF protein JVX96_29500 PF02311 AraC-like ligand binding domain JVX96_29500 PF12833 Helix-turn-helix domain JVX96_29510 PF04632 Fusaric acid resistance protein family JVX96_29515 PF07869 Protein of unknown function (DUF1656) JVX96_29520 PF00529 HlyD membrane-fusion protein of T1SS JVX96_29520 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JVX96_29530 PF03466 LysR substrate binding domain JVX96_29530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_29535 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_29545 PF02515 CoA-transferase family III JVX96_29550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_29550 PF03466 LysR substrate binding domain JVX96_29565 PF13458 Periplasmic binding protein JVX96_29570 PF02653 Branched-chain amino acid transport system / permease component JVX96_29580 PF12399 Branched-chain amino acid ATP-binding cassette transporter JVX96_29580 PF00005 ABC transporter JVX96_29585 PF00005 ABC transporter JVX96_29590 PF05853 beta-keto acid cleavage enzyme JVX96_29595 PF00106 short chain dehydrogenase JVX96_29600 PF07519 Tannase and feruloyl esterase JVX96_29605 PF00135 Carboxylesterase family JVX96_29625 PF00356 Bacterial regulatory proteins, lacI family JVX96_29630 PF03480 Bacterial extracellular solute-binding protein, family 7 JVX96_29635 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component JVX96_29645 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain JVX96_29645 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain JVX96_29650 PF17042 Nucleotide-binding C-terminal domain JVX96_29650 PF07005 Sugar-binding N-terminal domain JVX96_29660 PF12833 Helix-turn-helix domain JVX96_29665 PF00072 Response regulator receiver domain JVX96_29665 PF00486 Transcriptional regulatory protein, C terminal JVX96_29670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JVX96_29670 PF00512 His Kinase A (phospho-acceptor) domain JVX96_29670 PF00672 HAMP domain JVX96_29685 PF12951 Passenger-associated-transport-repeat JVX96_29685 PF12951 Passenger-associated-transport-repeat JVX96_29705 PF02321 Outer membrane efflux protein JVX96_29710 PF00873 AcrB/AcrD/AcrF family JVX96_29715 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JVX96_29715 PF00529 HlyD membrane-fusion protein of T1SS JVX96_29755 PF01695 IstB-like ATP binding protein JVX96_29790 PF04539 Sigma-70 region 3 JVX96_29790 PF04545 Sigma-70, region 4 JVX96_29790 PF04542 Sigma-70 region 2 JVX96_29795 PF00813 FliP family JVX96_29805 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term JVX96_29815 PF07559 Flagellar basal body protein FlaE JVX96_29815 PF00460 Flagella basal body rod protein JVX96_29815 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JVX96_29820 PF03963 Flagellar hook capping protein - N-terminal region JVX96_29835 PF18269 T3SS EscN ATPase C-terminal domain JVX96_29835 PF02874 ATP synthase alpha/beta family, beta-barrel domain JVX96_29835 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JVX96_29850 PF01514 Secretory protein of YscJ/FliF family JVX96_29850 PF08345 Flagellar M-ring protein C-terminal JVX96_29855 PF02049 Flagellar hook-basal body complex protein FliE JVX96_29860 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JVX96_29860 PF00460 Flagella basal body rod protein JVX96_29870 PF02119 Flagellar P-ring protein JVX96_29875 PF02107 Flagellar L-ring protein JVX96_29885 PF00460 Flagella basal body rod protein JVX96_29885 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JVX96_29890 PF00460 Flagella basal body rod protein JVX96_29890 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JVX96_29895 PF00771 FHIPEP family JVX96_29900 PF01312 FlhB HrpN YscU SpaS Family JVX96_29905 PF01311 Bacterial export proteins, family 1 JVX96_29910 PF01313 Bacterial export proteins, family 3 JVX96_29940 PF01555 DNA methylase JVX96_29940 PF18273 Type III R-M EcoP15I C-terminal domain JVX96_29945 PF04851 Type III restriction enzyme, res subunit JVX96_29945 PF08774 VRR-NUC domain JVX96_29955 PF00665 Integrase core domain JVX96_29960 PF01695 IstB-like ATP binding protein JVX96_29970 PF01527 Transposase JVX96_29995 PF00117 Glutamine amidotransferase class-I JVX96_29995 PF04715 Anthranilate synthase component I, N terminal region JVX96_29995 PF00425 chorismate binding enzyme JVX96_30005 PF00765 Autoinducer synthase JVX96_30010 PF03472 Autoinducer binding domain JVX96_30010 PF00196 Bacterial regulatory proteins, luxR family JVX96_30020 PF17762 HTH domain found in ParB protein JVX96_30020 PF02195 ParB-like nuclease domain JVX96_30025 PF13614 AAA domain JVX96_30045 PF03135 CagE, TrbE, VirB family, component of type IV transporter system JVX96_30050 PF07996 Type IV secretion system proteins JVX96_30055 PF04610 TrbL/VirB6 plasmid conjugal transfer protein JVX96_30060 PF04335 VirB8 protein JVX96_30065 PF03524 Conjugal transfer protein JVX96_30070 PF03743 Bacterial conjugation TrbI-like protein JVX96_30075 PF00437 Type II/IV secretion system protein JVX96_30080 PF02534 Type IV secretory system Conjugative DNA transfer JVX96_30100 PF00384 Molybdopterin oxidoreductase JVX96_30105 PF00210 Ferritin-like domain JVX96_30110 PF00486 Transcriptional regulatory protein, C terminal JVX96_30110 PF00072 Response regulator receiver domain JVX96_30120 PF00512 His Kinase A (phospho-acceptor) domain JVX96_30120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JVX96_30125 PF00561 alpha/beta hydrolase fold JVX96_30135 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_30140 PF01979 Amidohydrolase family JVX96_30150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_30150 PF03466 LysR substrate binding domain JVX96_30155 PF03466 LysR substrate binding domain JVX96_30155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_30160 PF07690 Major Facilitator Superfamily JVX96_30165 PF07690 Major Facilitator Superfamily JVX96_30185 PF12399 Branched-chain amino acid ATP-binding cassette transporter JVX96_30185 PF00005 ABC transporter JVX96_30190 PF00005 ABC transporter JVX96_30200 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JVX96_30205 PF01799 [2Fe-2S] binding domain JVX96_30205 PF00111 2Fe-2S iron-sulfur cluster binding domain JVX96_30210 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase JVX96_30210 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JVX96_30210 PF00034 Cytochrome c JVX96_30220 PF01494 FAD binding domain JVX96_30230 PF03466 LysR substrate binding domain JVX96_30230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_30235 PF00171 Aldehyde dehydrogenase family JVX96_30240 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_30245 PF00109 Beta-ketoacyl synthase, N-terminal domain JVX96_30245 PF02801 Beta-ketoacyl synthase, C-terminal domain JVX96_30245 PF00107 Zinc-binding dehydrogenase JVX96_30245 PF08240 Alcohol dehydrogenase GroES-like domain JVX96_30245 PF00698 Acyl transferase domain JVX96_30245 PF08659 KR domain JVX96_30245 PF16197 Ketoacyl-synthetase C-terminal extension JVX96_30245 PF14765 Polyketide synthase dehydratase JVX96_30245 PF00550 Phosphopantetheine attachment site JVX96_30270 PF01037 Lrp/AsnC ligand binding domain JVX96_30275 PF00202 Aminotransferase class-III JVX96_30280 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JVX96_30300 PF01266 FAD dependent oxidoreductase JVX96_30305 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JVX96_30310 PF00528 Binding-protein-dependent transport system inner membrane component JVX96_30315 PF12911 N-terminal TM domain of oligopeptide transport permease C JVX96_30315 PF00528 Binding-protein-dependent transport system inner membrane component JVX96_30320 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JVX96_30320 PF00005 ABC transporter JVX96_30325 PF00180 Isocitrate/isopropylmalate dehydrogenase JVX96_30330 PF00171 Aldehyde dehydrogenase family JVX96_30335 PF00171 Aldehyde dehydrogenase family JVX96_30340 PF01266 FAD dependent oxidoreductase JVX96_30345 PF03972 MmgE/PrpD family JVX96_30350 PF00583 Acetyltransferase (GNAT) family JVX96_30350 PF13607 Succinyl-CoA ligase like flavodoxin domain JVX96_30350 PF13380 CoA binding domain JVX96_30355 PF00378 Enoyl-CoA hydratase/isomerase JVX96_30360 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_30370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_30370 PF03466 LysR substrate binding domain JVX96_30375 PF02558 Ketopantoate reductase PanE/ApbA JVX96_30375 PF08546 Ketopantoate reductase PanE/ApbA C terminal JVX96_30385 PF01575 MaoC like domain JVX96_30385 PF00171 Aldehyde dehydrogenase family JVX96_30390 PF02515 CoA-transferase family III JVX96_30395 PF08501 Shikimate dehydrogenase substrate binding domain JVX96_30395 PF01488 Shikimate / quinate 5-dehydrogenase JVX96_30395 PF18317 Shikimate 5'-dehydrogenase C-terminal domain JVX96_30400 PF01220 Dehydroquinase class II JVX96_30410 PF00378 Enoyl-CoA hydratase/isomerase JVX96_30425 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_30430 PF01614 Bacterial transcriptional regulator JVX96_30435 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JVX96_30435 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JVX96_30435 PF02770 Acyl-CoA dehydrogenase, middle domain JVX96_30440 PF13380 CoA binding domain JVX96_30440 PF00583 Acetyltransferase (GNAT) family JVX96_30440 PF13607 Succinyl-CoA ligase like flavodoxin domain JVX96_30445 PF02515 CoA-transferase family III JVX96_30450 PF03060 Nitronate monooxygenase JVX96_30460 PF00356 Bacterial regulatory proteins, lacI family JVX96_30470 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_30480 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_30485 PF00106 short chain dehydrogenase JVX96_30485 PF00561 alpha/beta hydrolase fold JVX96_30510 PF00563 EAL domain JVX96_30510 PF03707 Bacterial signalling protein N terminal repeat JVX96_30510 PF00990 Diguanylate cyclase, GGDEF domain JVX96_30520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_30520 PF03466 LysR substrate binding domain JVX96_30525 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_30535 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JVX96_30535 PF13426 PAS domain JVX96_30535 PF08447 PAS fold JVX96_30540 PF00196 Bacterial regulatory proteins, luxR family JVX96_30555 PF05532 CsbD-like JVX96_30565 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JVX96_30565 PF00128 Alpha amylase, catalytic domain JVX96_30570 PF00012 Hsp70 protein JVX96_30585 PF18011 C-terminal domain found in long catalases JVX96_30585 PF00199 Catalase JVX96_30585 PF06628 Catalase-related immune-responsive JVX96_30590 PF00512 His Kinase A (phospho-acceptor) domain JVX96_30590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JVX96_30590 PF00072 Response regulator receiver domain JVX96_30590 PF09308 LuxQ, periplasmic JVX96_30605 PF16124 RecQ zinc-binding JVX96_30605 PF00270 DEAD/DEAH box helicase JVX96_30605 PF00271 Helicase conserved C-terminal domain JVX96_30605 PF09382 RQC domain JVX96_30605 PF00570 HRDC domain JVX96_30615 PF13460 NAD(P)H-binding JVX96_30620 PF03466 LysR substrate binding domain JVX96_30620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_30635 PF00072 Response regulator receiver domain JVX96_30635 PF00196 Bacterial regulatory proteins, luxR family JVX96_30650 PF10503 Esterase PHB depolymerase JVX96_30665 PF17755 UvrA DNA-binding domain JVX96_30685 PF00384 Molybdopterin oxidoreductase JVX96_30695 PF00111 2Fe-2S iron-sulfur cluster binding domain JVX96_30695 PF01799 [2Fe-2S] binding domain JVX96_30695 PF10518 TAT (twin-arginine translocation) pathway signal sequence JVX96_30700 PF03450 CO dehydrogenase flavoprotein C-terminal domain JVX96_30700 PF00941 FAD binding domain in molybdopterin dehydrogenase JVX96_30705 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase JVX96_30705 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain JVX96_30710 PF03471 Transporter associated domain JVX96_30710 PF00999 Sodium/hydrogen exchanger family JVX96_30720 PF03707 Bacterial signalling protein N terminal repeat JVX96_30720 PF00563 EAL domain JVX96_30720 PF00990 Diguanylate cyclase, GGDEF domain JVX96_30740 PF00690 Cation transporter/ATPase, N-terminus JVX96_30740 PF00689 Cation transporting ATPase, C-terminus JVX96_30745 PF00582 Universal stress protein family JVX96_30750 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JVX96_30750 PF00005 ABC transporter JVX96_30755 PF00528 Binding-protein-dependent transport system inner membrane component JVX96_30755 PF12911 N-terminal TM domain of oligopeptide transport permease C JVX96_30760 PF00528 Binding-protein-dependent transport system inner membrane component JVX96_30770 PF00593 TonB dependent receptor JVX96_30770 PF07715 TonB-dependent Receptor Plug Domain JVX96_30790 PF00005 ABC transporter JVX96_30805 PF01817 Chorismate mutase type II JVX96_30810 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_30830 PF13614 AAA domain JVX96_30830 PF00376 MerR family regulatory protein JVX96_30845 PF00011 Hsp20/alpha crystallin family JVX96_30850 PF00011 Hsp20/alpha crystallin family JVX96_30860 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_30865 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_30870 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_30875 PF00043 Glutathione S-transferase, C-terminal domain JVX96_30875 PF02798 Glutathione S-transferase, N-terminal domain JVX96_30880 PF00043 Glutathione S-transferase, C-terminal domain JVX96_30880 PF02798 Glutathione S-transferase, N-terminal domain JVX96_30885 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_30890 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JVX96_30890 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JVX96_30915 PF12146 Serine aminopeptidase, S33 JVX96_30925 PF01494 FAD binding domain JVX96_30930 PF00171 Aldehyde dehydrogenase family JVX96_30935 PF00171 Aldehyde dehydrogenase family JVX96_30960 PF07044 Protein of unknown function (DUF1329) JVX96_30970 PF00171 Aldehyde dehydrogenase family JVX96_30975 PF12833 Helix-turn-helix domain JVX96_30995 PF00202 Aminotransferase class-III JVX96_31005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JVX96_31005 PF00512 His Kinase A (phospho-acceptor) domain JVX96_31005 PF00672 HAMP domain JVX96_31010 PF00486 Transcriptional regulatory protein, C terminal JVX96_31010 PF00072 Response regulator receiver domain JVX96_31015 PF04794 YdjC-like protein JVX96_31030 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JVX96_31035 PF00005 ABC transporter JVX96_31035 PF02687 FtsX-like permease family JVX96_31035 PF12704 MacB-like periplasmic core domain JVX96_31040 PF02321 Outer membrane efflux protein JVX96_31050 PF00563 EAL domain JVX96_31050 PF12792 CSS motif domain associated with EAL JVX96_31060 PF07943 Penicillin-binding protein 5, C-terminal domain JVX96_31060 PF00768 D-alanyl-D-alanine carboxypeptidase JVX96_31070 PF00892 EamA-like transporter family JVX96_31100 PF00171 Aldehyde dehydrogenase family JVX96_31105 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase JVX96_31120 PF00005 ABC transporter JVX96_31130 PF00266 Aminotransferase class-V JVX96_31135 PF00136 DNA polymerase family B JVX96_31135 PF03104 DNA polymerase family B, exonuclease domain JVX96_31140 PF00871 Acetokinase family JVX96_31145 PF00905 Penicillin binding protein transpeptidase domain JVX96_31145 PF03717 Penicillin-binding Protein dimerisation domain JVX96_31150 PF07690 Major Facilitator Superfamily JVX96_31155 PF01638 HxlR-like helix-turn-helix JVX96_31175 PF00158 Sigma-54 interaction domain JVX96_31180 PF08028 Acyl-CoA dehydrogenase, C-terminal domain JVX96_31180 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JVX96_31185 PF00296 Luciferase-like monooxygenase JVX96_31190 PF08028 Acyl-CoA dehydrogenase, C-terminal domain JVX96_31190 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JVX96_31195 PF03358 NADPH-dependent FMN reductase JVX96_31200 PF00296 Luciferase-like monooxygenase JVX96_31205 PF12399 Branched-chain amino acid ATP-binding cassette transporter JVX96_31205 PF00005 ABC transporter JVX96_31210 PF02653 Branched-chain amino acid transport system / permease component JVX96_31215 PF02653 Branched-chain amino acid transport system / permease component JVX96_31225 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JVX96_31225 PF08028 Acyl-CoA dehydrogenase, C-terminal domain JVX96_31230 PF00005 ABC transporter JVX96_31240 PF04244 Deoxyribodipyrimidine photo-lyase-related protein JVX96_31245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_31245 PF03466 LysR substrate binding domain JVX96_31250 PF07690 Major Facilitator Superfamily JVX96_31260 PF01569 PAP2 superfamily JVX96_31270 PF03466 LysR substrate binding domain JVX96_31270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_31280 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_31295 PF13458 Periplasmic binding protein JVX96_31315 PF00378 Enoyl-CoA hydratase/isomerase JVX96_31335 PF00501 AMP-binding enzyme JVX96_31335 PF14535 AMP-binding enzyme C-terminal domain JVX96_31345 PF00111 2Fe-2S iron-sulfur cluster binding domain JVX96_31345 PF00970 Oxidoreductase FAD-binding domain JVX96_31345 PF00175 Oxidoreductase NAD-binding domain JVX96_31360 PF00005 ABC transporter JVX96_31360 PF12399 Branched-chain amino acid ATP-binding cassette transporter JVX96_31365 PF00005 ABC transporter JVX96_31370 PF01565 FAD binding domain JVX96_31370 PF02913 FAD linked oxidases, C-terminal domain JVX96_31375 PF01037 Lrp/AsnC ligand binding domain JVX96_31390 PF01042 Endoribonuclease L-PSP JVX96_31395 PF07690 Major Facilitator Superfamily JVX96_31435 PF13936 Helix-turn-helix domain JVX96_31435 PF00665 Integrase core domain JVX96_31440 PF00355 Rieske [2Fe-2S] domain JVX96_31450 PF02653 Branched-chain amino acid transport system / permease component JVX96_31460 PF00005 ABC transporter JVX96_31470 PF13458 Periplasmic binding protein JVX96_31475 PF03466 LysR substrate binding domain JVX96_31475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_31480 PF00596 Class II Aldolase and Adducin N-terminal domain JVX96_31490 PF01425 Amidase JVX96_31495 PF00970 Oxidoreductase FAD-binding domain JVX96_31495 PF00175 Oxidoreductase NAD-binding domain JVX96_31495 PF00111 2Fe-2S iron-sulfur cluster binding domain JVX96_31505 PF17991 Thioredoxin like C-terminal domain JVX96_31505 PF02683 Cytochrome C biogenesis protein transmembrane region JVX96_31505 PF00578 AhpC/TSA family JVX96_31510 PF00561 alpha/beta hydrolase fold JVX96_31515 PF00072 Response regulator receiver domain JVX96_31515 PF00486 Transcriptional regulatory protein, C terminal JVX96_31520 PF00512 His Kinase A (phospho-acceptor) domain JVX96_31520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JVX96_31520 PF00672 HAMP domain JVX96_31525 PF02566 OsmC-like protein JVX96_31530 PF01738 Dienelactone hydrolase family JVX96_31535 PF07995 Glucose / Sorbosone dehydrogenase JVX96_31545 PF00216 Bacterial DNA-binding protein JVX96_31550 PF00877 NlpC/P60 family JVX96_31560 PF01494 FAD binding domain JVX96_31565 PF13722 5TM C-terminal transporter carbon starvation CstA JVX96_31565 PF02554 Carbon starvation protein CstA JVX96_31570 PF04328 Selenoprotein, putative JVX96_31575 PF01546 Peptidase family M20/M25/M40 JVX96_31575 PF07687 Peptidase dimerisation domain JVX96_31585 PF03466 LysR substrate binding domain JVX96_31585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_31590 PF13193 AMP-binding enzyme C-terminal domain JVX96_31590 PF00501 AMP-binding enzyme JVX96_31595 PF02770 Acyl-CoA dehydrogenase, middle domain JVX96_31595 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JVX96_31595 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JVX96_31600 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_31605 PF07859 alpha/beta hydrolase fold JVX96_31610 PF08212 Lipocalin-like domain JVX96_31615 PF01053 Cys/Met metabolism PLP-dependent enzyme JVX96_31620 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_31635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_31635 PF03466 LysR substrate binding domain JVX96_31640 PF00593 TonB dependent receptor JVX96_31640 PF07715 TonB-dependent Receptor Plug Domain JVX96_31645 PF00563 EAL domain JVX96_31645 PF00990 Diguanylate cyclase, GGDEF domain JVX96_31645 PF03707 Bacterial signalling protein N terminal repeat JVX96_31650 PF01557 Fumarylacetoacetate (FAA) hydrolase family JVX96_31660 PF01494 FAD binding domain JVX96_31670 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_31675 PF07690 Major Facilitator Superfamily JVX96_31690 PF08468 Methyltransferase small domain N-terminal JVX96_31690 PF05175 Methyltransferase small domain JVX96_31720 PF01774 UreD urease accessory protein JVX96_31725 PF14437 MafB19-like deaminase JVX96_31735 PF00355 Rieske [2Fe-2S] domain JVX96_31740 PF13188 PAS domain JVX96_31740 PF00563 EAL domain JVX96_31740 PF00990 Diguanylate cyclase, GGDEF domain JVX96_31740 PF03707 Bacterial signalling protein N terminal repeat JVX96_31745 PF01266 FAD dependent oxidoreductase JVX96_31750 PF01037 Lrp/AsnC ligand binding domain JVX96_31765 PF00144 Beta-lactamase JVX96_31765 PF11954 Domain of unknown function (DUF3471) JVX96_31770 PF01638 HxlR-like helix-turn-helix JVX96_31780 PF00072 Response regulator receiver domain JVX96_31780 PF00486 Transcriptional regulatory protein, C terminal JVX96_31785 PF00512 His Kinase A (phospho-acceptor) domain JVX96_31785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JVX96_31800 PF00072 Response regulator receiver domain JVX96_31800 PF00486 Transcriptional regulatory protein, C terminal JVX96_31805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JVX96_31805 PF00512 His Kinase A (phospho-acceptor) domain JVX96_31815 PF00528 Binding-protein-dependent transport system inner membrane component JVX96_31820 PF00005 ABC transporter JVX96_31830 PF00390 Malic enzyme, N-terminal domain JVX96_31830 PF03949 Malic enzyme, NAD binding domain JVX96_31830 PF01515 Phosphate acetyl/butaryl transferase JVX96_31835 PF04820 Tryptophan halogenase JVX96_31840 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JVX96_31840 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JVX96_31845 PF01261 Xylose isomerase-like TIM barrel JVX96_31850 PF00205 Thiamine pyrophosphate enzyme, central domain JVX96_31850 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JVX96_31850 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JVX96_31855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_31855 PF03466 LysR substrate binding domain JVX96_31870 PF01594 AI-2E family transporter JVX96_31880 PF00375 Sodium:dicarboxylate symporter family JVX96_31895 PF00563 EAL domain JVX96_31895 PF00990 Diguanylate cyclase, GGDEF domain JVX96_31895 PF03707 Bacterial signalling protein N terminal repeat JVX96_31900 PF01546 Peptidase family M20/M25/M40 JVX96_31900 PF07687 Peptidase dimerisation domain JVX96_31905 PF01546 Peptidase family M20/M25/M40 JVX96_31905 PF07687 Peptidase dimerisation domain JVX96_31915 PF07729 FCD domain JVX96_31915 PF00392 Bacterial regulatory proteins, gntR family JVX96_31920 PF00576 HIUase/Transthyretin family JVX96_31940 PF13660 Domain of unknown function (DUF4147) JVX96_31940 PF05161 MOFRL family JVX96_31945 PF00171 Aldehyde dehydrogenase family JVX96_31950 PF02308 MgtC family JVX96_31955 PF00690 Cation transporter/ATPase, N-terminus JVX96_31955 PF00689 Cation transporting ATPase, C-terminus JVX96_31975 PF01451 Low molecular weight phosphotyrosine protein phosphatase JVX96_31990 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component JVX96_32005 PF01070 FMN-dependent dehydrogenase JVX96_32020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_32020 PF03466 LysR substrate binding domain JVX96_32030 PF01925 Sulfite exporter TauE/SafE JVX96_32035 PF00111 2Fe-2S iron-sulfur cluster binding domain JVX96_32035 PF01799 [2Fe-2S] binding domain JVX96_32040 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain JVX96_32040 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase JVX96_32045 PF03466 LysR substrate binding domain JVX96_32045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_32050 PF00860 Permease family JVX96_32055 PF00005 ABC transporter JVX96_32070 PF02608 ABC transporter substrate-binding protein PnrA-like JVX96_32075 PF00069 Protein kinase domain JVX96_32090 PF18381 YcaO cyclodehydratase C-terminal domain JVX96_32090 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding JVX96_32120 PF01266 FAD dependent oxidoreductase JVX96_32125 PF00005 ABC transporter JVX96_32130 PF00528 Binding-protein-dependent transport system inner membrane component JVX96_32135 PF00497 Bacterial extracellular solute-binding proteins, family 3 JVX96_32145 PF00962 Adenosine/AMP deaminase JVX96_32150 PF07690 Major Facilitator Superfamily JVX96_32155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_32155 PF03466 LysR substrate binding domain JVX96_32160 PF02311 AraC-like ligand binding domain JVX96_32160 PF12833 Helix-turn-helix domain JVX96_32170 PF01425 Amidase JVX96_32175 PF00999 Sodium/hydrogen exchanger family JVX96_32180 PF10011 Predicted membrane protein (DUF2254) JVX96_32205 PF07331 Tripartite tricarboxylate transporter TctB family JVX96_32210 PF01970 Tripartite tricarboxylate transporter TctA family JVX96_32215 PF01551 Peptidase family M23 JVX96_32215 PF01476 LysM domain JVX96_32225 PF00083 Sugar (and other) transporter JVX96_32230 PF07992 Pyridine nucleotide-disulphide oxidoreductase JVX96_32230 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region JVX96_32230 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster JVX96_32235 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II JVX96_32235 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase JVX96_32235 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg JVX96_32245 PF00571 CBS domain JVX96_32255 PF02447 GntP family permease JVX96_32260 PF00679 Elongation factor G C-terminus JVX96_32260 PF03764 Elongation factor G, domain IV JVX96_32260 PF14492 Elongation Factor G, domain II JVX96_32260 PF00009 Elongation factor Tu GTP binding domain JVX96_32265 PF00392 Bacterial regulatory proteins, gntR family JVX96_32265 PF00155 Aminotransferase class I and II JVX96_32270 PF00155 Aminotransferase class I and II JVX96_32295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_32295 PF03466 LysR substrate binding domain JVX96_32310 PF00072 Response regulator receiver domain JVX96_32310 PF00196 Bacterial regulatory proteins, luxR family JVX96_32315 PF00512 His Kinase A (phospho-acceptor) domain JVX96_32315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JVX96_32315 PF00989 PAS fold JVX96_32325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_32325 PF03466 LysR substrate binding domain JVX96_32330 PF00083 Sugar (and other) transporter JVX96_32330 PF07690 Major Facilitator Superfamily JVX96_32360 PF02608 ABC transporter substrate-binding protein PnrA-like JVX96_32365 PF02515 CoA-transferase family III JVX96_32380 PF02515 CoA-transferase family III JVX96_32385 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_32390 PF00392 Bacterial regulatory proteins, gntR family JVX96_32390 PF07729 FCD domain JVX96_32395 PF00111 2Fe-2S iron-sulfur cluster binding domain JVX96_32395 PF00970 Oxidoreductase FAD-binding domain JVX96_32400 PF00355 Rieske [2Fe-2S] domain JVX96_32410 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_32415 PF07729 FCD domain JVX96_32415 PF00392 Bacterial regulatory proteins, gntR family JVX96_32420 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JVX96_32420 PF02770 Acyl-CoA dehydrogenase, middle domain JVX96_32420 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JVX96_32425 PF07729 FCD domain JVX96_32425 PF00392 Bacterial regulatory proteins, gntR family JVX96_32430 PF01144 Coenzyme A transferase JVX96_32435 PF01144 Coenzyme A transferase JVX96_32440 PF02515 CoA-transferase family III JVX96_32445 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_32460 PF13193 AMP-binding enzyme C-terminal domain JVX96_32460 PF00501 AMP-binding enzyme JVX96_32465 PF13193 AMP-binding enzyme C-terminal domain JVX96_32465 PF00501 AMP-binding enzyme JVX96_32475 PF03060 Nitronate monooxygenase JVX96_32485 PF00378 Enoyl-CoA hydratase/isomerase JVX96_32490 PF01575 MaoC like domain JVX96_32495 PF14765 Polyketide synthase dehydratase JVX96_32495 PF00550 Phosphopantetheine attachment site JVX96_32495 PF08659 KR domain JVX96_32495 PF02801 Beta-ketoacyl synthase, C-terminal domain JVX96_32495 PF00698 Acyl transferase domain JVX96_32495 PF00109 Beta-ketoacyl synthase, N-terminal domain JVX96_32495 PF08240 Alcohol dehydrogenase GroES-like domain JVX96_32495 PF16197 Ketoacyl-synthetase C-terminal extension JVX96_32500 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JVX96_32500 PF02770 Acyl-CoA dehydrogenase, middle domain JVX96_32500 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JVX96_32505 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JVX96_32505 PF02770 Acyl-CoA dehydrogenase, middle domain JVX96_32505 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JVX96_32520 PF13193 AMP-binding enzyme C-terminal domain JVX96_32520 PF00501 AMP-binding enzyme JVX96_32525 PF02770 Acyl-CoA dehydrogenase, middle domain JVX96_32525 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JVX96_32525 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JVX96_32535 PF12833 Helix-turn-helix domain JVX96_32535 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term JVX96_32540 PF00501 AMP-binding enzyme JVX96_32540 PF13193 AMP-binding enzyme C-terminal domain JVX96_32550 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JVX96_32550 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JVX96_32550 PF02770 Acyl-CoA dehydrogenase, middle domain JVX96_32560 PF02515 CoA-transferase family III JVX96_32575 PF00378 Enoyl-CoA hydratase/isomerase JVX96_32585 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JVX96_32585 PF00378 Enoyl-CoA hydratase/isomerase JVX96_32585 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JVX96_32590 PF02803 Thiolase, C-terminal domain JVX96_32590 PF00108 Thiolase, N-terminal domain JVX96_32595 PF00550 Phosphopantetheine attachment site JVX96_32595 PF14765 Polyketide synthase dehydratase JVX96_32595 PF16197 Ketoacyl-synthetase C-terminal extension JVX96_32595 PF08659 KR domain JVX96_32595 PF02801 Beta-ketoacyl synthase, C-terminal domain JVX96_32595 PF00698 Acyl transferase domain JVX96_32595 PF08240 Alcohol dehydrogenase GroES-like domain JVX96_32595 PF00109 Beta-ketoacyl synthase, N-terminal domain JVX96_32595 PF00107 Zinc-binding dehydrogenase JVX96_32600 PF03401 Tripartite tricarboxylate transporter family receptor JVX96_32605 PF00111 2Fe-2S iron-sulfur cluster binding domain JVX96_32605 PF00175 Oxidoreductase NAD-binding domain JVX96_32610 PF00067 Cytochrome P450 JVX96_32615 PF00171 Aldehyde dehydrogenase family JVX96_32625 PF12833 Helix-turn-helix domain JVX96_32625 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term JVX96_32630 PF00378 Enoyl-CoA hydratase/isomerase JVX96_32635 PF02770 Acyl-CoA dehydrogenase, middle domain JVX96_32635 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JVX96_32635 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JVX96_32640 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JVX96_32640 PF02770 Acyl-CoA dehydrogenase, middle domain JVX96_32640 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JVX96_32645 PF01979 Amidohydrolase family JVX96_32650 PF00692 dUTPase JVX96_32655 PF04228 Putative neutral zinc metallopeptidase JVX96_32660 PF00270 DEAD/DEAH box helicase JVX96_32660 PF00271 Helicase conserved C-terminal domain JVX96_32675 PF05995 Cysteine dioxygenase type I JVX96_32680 PF09084 NMT1/THI5 like JVX96_32685 PF02770 Acyl-CoA dehydrogenase, middle domain JVX96_32685 PF08028 Acyl-CoA dehydrogenase, C-terminal domain JVX96_32685 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JVX96_32695 PF00296 Luciferase-like monooxygenase JVX96_32700 PF00596 Class II Aldolase and Adducin N-terminal domain JVX96_32705 PF09084 NMT1/THI5 like JVX96_32720 PF03707 Bacterial signalling protein N terminal repeat JVX96_32720 PF00990 Diguanylate cyclase, GGDEF domain JVX96_32720 PF00563 EAL domain JVX96_32725 PF01557 Fumarylacetoacetate (FAA) hydrolase family JVX96_32730 PF12833 Helix-turn-helix domain JVX96_32735 PF00392 Bacterial regulatory proteins, gntR family JVX96_32735 PF00155 Aminotransferase class I and II JVX96_32745 PF00149 Calcineurin-like phosphoesterase JVX96_32750 PF01595 Cyclin M transmembrane N-terminal domain JVX96_32750 PF03471 Transporter associated domain JVX96_32750 PF00571 CBS domain JVX96_32760 PF04552 Sigma-54, DNA binding domain JVX96_32760 PF00309 Sigma-54 factor, Activator interacting domain (AID) JVX96_32760 PF04963 Sigma-54 factor, core binding domain JVX96_32765 PF00709 Adenylosuccinate synthetase JVX96_32770 PF00990 Diguanylate cyclase, GGDEF domain JVX96_32770 PF00563 EAL domain JVX96_32770 PF05231 MASE1 JVX96_32770 PF08447 PAS fold JVX96_32770 PF08448 PAS fold JVX96_32770 PF13426 PAS domain JVX96_32790 PF03466 LysR substrate binding domain JVX96_32790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_32795 PF02525 Flavodoxin-like fold JVX96_32815 PF07683 Cobalamin synthesis protein cobW C-terminal domain JVX96_32815 PF02492 CobW/HypB/UreG, nucleotide-binding domain JVX96_32820 PF01979 Amidohydrolase family JVX96_32825 PF00005 ABC transporter JVX96_32825 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JVX96_32830 PF00005 ABC transporter JVX96_32830 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JVX96_32835 PF00528 Binding-protein-dependent transport system inner membrane component JVX96_32835 PF12911 N-terminal TM domain of oligopeptide transport permease C JVX96_32840 PF00528 Binding-protein-dependent transport system inner membrane component JVX96_32845 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JVX96_32860 PF00155 Aminotransferase class I and II JVX96_32860 PF00392 Bacterial regulatory proteins, gntR family JVX96_32865 PF04069 Substrate binding domain of ABC-type glycine betaine transport system JVX96_32870 PF00005 ABC transporter JVX96_32875 PF00528 Binding-protein-dependent transport system inner membrane component JVX96_32880 PF03466 LysR substrate binding domain JVX96_32880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_32885 PF03466 LysR substrate binding domain JVX96_32885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_32890 PF00561 alpha/beta hydrolase fold JVX96_32895 PF00106 short chain dehydrogenase JVX96_32905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JVX96_32905 PF00512 His Kinase A (phospho-acceptor) domain JVX96_32905 PF00989 PAS fold JVX96_32905 PF16736 Single Cache-like JVX96_32915 PF00072 Response regulator receiver domain JVX96_32915 PF00486 Transcriptional regulatory protein, C terminal JVX96_32920 PF04355 SmpA / OmlA family JVX96_32920 PF00691 OmpA family JVX96_32925 PF03895 YadA-like membrane anchor domain JVX96_32925 PF13018 Extended Signal Peptide of Type V secretion system JVX96_32925 PF05662 Coiled stalk of trimeric autotransporter adhesin JVX96_32925 PF05658 Head domain of trimeric autotransporter adhesin JVX96_32930 PF03466 LysR substrate binding domain JVX96_32930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JVX96_32935 PF01118 Semialdehyde dehydrogenase, NAD binding domain