locus-tag class description B7L28_00005 PF00308 Bacterial dnaA protein B7L28_00005 PF08299 Bacterial dnaA protein helix-turn-helix B7L28_00005 PF11638 DnaA N-terminal domain B7L28_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain B7L28_00010 PF02767 DNA polymerase III beta subunit, central domain B7L28_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain B7L28_00020 PF02463 RecF/RecN/SMC N terminal domain B7L28_00035 PF01751 Toprim domain B7L28_00035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B7L28_00035 PF00986 DNA gyrase B subunit, carboxyl terminus B7L28_00035 PF00204 DNA gyrase B B7L28_00040 PF00324 Amino acid permease B7L28_00045 PF01906 Putative heavy-metal-binding B7L28_00050 PF00873 AcrB/AcrD/AcrF family B7L28_00060 PF00571 CBS domain B7L28_00060 PF03471 Transporter associated domain B7L28_00060 PF01595 Cyclin M transmembrane N-terminal domain B7L28_00080 PF00535 Glycosyl transferase family 2 B7L28_00095 PF01075 Glycosyltransferase family 9 (heptosyltransferase) B7L28_00100 PF00132 Bacterial transferase hexapeptide (six repeats) B7L28_00120 PF00534 Glycosyl transferases group 1 B7L28_00150 PF01933 Uncharacterised protein family UPF0052 B7L28_00155 PF14527 WhiA LAGLIDADG-like domain B7L28_00155 PF02650 WhiA C-terminal HTH domain B7L28_00155 PF10298 WhiA N-terminal LAGLIDADG-like domain B7L28_00165 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain B7L28_00165 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain B7L28_00175 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain B7L28_00175 PF00117 Glutamine amidotransferase class-I B7L28_00180 PF02142 MGS-like domain B7L28_00180 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain B7L28_00180 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain B7L28_00185 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B B7L28_00190 PF01180 Dihydroorotate dehydrogenase B7L28_00195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B7L28_00195 PF03466 LysR substrate binding domain B7L28_00205 PF01205 Uncharacterized protein family UPF0029 B7L28_00205 PF09186 Domain of unknown function (DUF1949) B7L28_00210 PF00403 Heavy-metal-associated domain B7L28_00220 PF04297 Putative helix-turn-helix protein, YlxM / p13 like B7L28_00225 PF00448 SRP54-type protein, GTPase domain B7L28_00225 PF02881 SRP54-type protein, helical bundle domain B7L28_00225 PF02978 Signal peptide binding domain B7L28_00230 PF00886 Ribosomal protein S16 B7L28_00245 PF05239 PRC-barrel domain B7L28_00245 PF01782 RimM N-terminal domain B7L28_00250 PF01746 tRNA (Guanine-1)-methyltransferase B7L28_00285 PF09936 SAM-dependent RNA methyltransferase B7L28_00290 PF01709 Transcriptional regulator B7L28_00295 PF02075 Crossover junction endodeoxyribonuclease RuvC B7L28_00300 PF01330 RuvA N terminal domain B7L28_00300 PF07499 RuvA, C-terminal domain B7L28_00310 PF08486 Stage II sporulation protein B7L28_00310 PF04122 Putative cell wall binding repeat 2 B7L28_00315 PF02547 Queuosine biosynthesis protein B7L28_00320 PF01702 Queuine tRNA-ribosyltransferase B7L28_00325 PF02699 Preprotein translocase subunit B7L28_00335 PF02355 Protein export membrane protein B7L28_00335 PF07549 SecD/SecF GG Motif B7L28_00340 PF07549 SecD/SecF GG Motif B7L28_00340 PF02355 Protein export membrane protein B7L28_00345 PF07690 Major Facilitator Superfamily B7L28_00375 PF00395 S-layer homology domain B7L28_00380 PF05658 Head domain of trimeric autotransporter adhesin B7L28_00380 PF03895 YadA-like membrane anchor domain B7L28_00380 PF05662 Coiled stalk of trimeric autotransporter adhesin B7L28_00400 PF00933 Glycosyl hydrolase family 3 N terminal domain B7L28_00410 PF00395 S-layer homology domain B7L28_00425 PF00395 S-layer homology domain B7L28_00430 PF00395 S-layer homology domain B7L28_00455 PF02463 RecF/RecN/SMC N terminal domain B7L28_00475 PF10119 Predicted methyltransferase regulatory domain B7L28_00475 PF13847 Methyltransferase domain B7L28_00480 PF03895 YadA-like membrane anchor domain B7L28_00480 PF05658 Head domain of trimeric autotransporter adhesin B7L28_00480 PF05662 Coiled stalk of trimeric autotransporter adhesin B7L28_00490 PF05662 Coiled stalk of trimeric autotransporter adhesin B7L28_00490 PF05658 Head domain of trimeric autotransporter adhesin B7L28_00490 PF03895 YadA-like membrane anchor domain B7L28_00490 PF13018 Extended Signal Peptide of Type V secretion system B7L28_00515 PF05726 Pirin C-terminal cupin domain B7L28_00515 PF02678 Pirin B7L28_00530 PF01435 Peptidase family M48 B7L28_00545 PF01618 MotA/TolQ/ExbB proton channel family B7L28_00550 PF02472 Biopolymer transport protein ExbD/TolR B7L28_00560 PF00593 TonB dependent receptor B7L28_00560 PF07715 TonB-dependent Receptor Plug Domain B7L28_00570 PF01032 FecCD transport family B7L28_00575 PF00005 ABC transporter B7L28_00580 PF07715 TonB-dependent Receptor Plug Domain B7L28_00580 PF00593 TonB dependent receptor B7L28_00585 PF07715 TonB-dependent Receptor Plug Domain B7L28_00585 PF00593 TonB dependent receptor B7L28_00590 PF01497 Periplasmic binding protein B7L28_00595 PF01032 FecCD transport family B7L28_00600 PF00005 ABC transporter B7L28_00605 PF17863 AAA lid domain B7L28_00605 PF07728 AAA domain (dynein-related subfamily) B7L28_00605 PF13519 von Willebrand factor type A domain B7L28_00610 PF13519 von Willebrand factor type A domain B7L28_00610 PF17863 AAA lid domain B7L28_00610 PF07728 AAA domain (dynein-related subfamily) B7L28_00615 PF02514 CobN/Magnesium Chelatase B7L28_00625 PF07715 TonB-dependent Receptor Plug Domain B7L28_00625 PF00593 TonB dependent receptor B7L28_00630 PF00155 Aminotransferase class I and II B7L28_00645 PF01494 FAD binding domain B7L28_00655 PF01012 Electron transfer flavoprotein domain B7L28_00660 PF00766 Electron transfer flavoprotein FAD-binding domain B7L28_00660 PF01012 Electron transfer flavoprotein domain B7L28_00670 PF00106 short chain dehydrogenase B7L28_00685 PF00528 Binding-protein-dependent transport system inner membrane component B7L28_00695 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle B7L28_00700 PF08352 Oligopeptide/dipeptide transporter, C-terminal region B7L28_00700 PF00005 ABC transporter B7L28_00705 PF08352 Oligopeptide/dipeptide transporter, C-terminal region B7L28_00705 PF00005 ABC transporter B7L28_00735 PF00682 HMGL-like B7L28_00735 PF08502 LeuA allosteric (dimerisation) domain B7L28_00740 PF00330 Aconitase family (aconitate hydratase) B7L28_00745 PF00694 Aconitase C-terminal domain B7L28_00750 PF00180 Isocitrate/isopropylmalate dehydrogenase B7L28_00755 PF00893 Small Multidrug Resistance protein B7L28_00765 PF00753 Metallo-beta-lactamase superfamily B7L28_00765 PF00258 Flavodoxin B7L28_00765 PF00301 Rubredoxin B7L28_00780 PF06827 Zinc finger found in FPG and IleRS B7L28_00780 PF00133 tRNA synthetases class I (I, L, M and V) B7L28_00780 PF08264 Anticodon-binding domain of tRNA B7L28_00785 PF07804 HipA-like C-terminal domain B7L28_00810 PF00497 Bacterial extracellular solute-binding proteins, family 3 B7L28_00830 PF12838 4Fe-4S dicluster domain B7L28_00835 PF02540 NAD synthase B7L28_00835 PF00958 GMP synthase C terminal domain B7L28_00835 PF00117 Glutamine amidotransferase class-I B7L28_00840 PF02086 D12 class N6 adenine-specific DNA methyltransferase B7L28_00885 PF09500 Putative thioesterase (yiiD_Cterm) B7L28_00885 PF00583 Acetyltransferase (GNAT) family B7L28_00890 PF00950 ABC 3 transport family B7L28_00895 PF00950 ABC 3 transport family B7L28_00900 PF00005 ABC transporter B7L28_00905 PF01297 Zinc-uptake complex component A periplasmic B7L28_00930 PF03063 Prismane/CO dehydrogenase family B7L28_00935 PF12706 Beta-lactamase superfamily domain B7L28_00945 PF07690 Major Facilitator Superfamily B7L28_00950 PF00325 Bacterial regulatory proteins, crp family B7L28_00950 PF00027 Cyclic nucleotide-binding domain B7L28_00955 PF14710 Respiratory nitrate reductase alpha N-terminal B7L28_00955 PF00384 Molybdopterin oxidoreductase B7L28_00955 PF01568 Molydopterin dinucleotide binding domain B7L28_00960 PF14711 Respiratory nitrate reductase beta C-terminal B7L28_00960 PF13247 4Fe-4S dicluster domain B7L28_00965 PF02613 Nitrate reductase delta subunit B7L28_00970 PF02665 Nitrate reductase gamma subunit B7L28_00985 PF07690 Major Facilitator Superfamily B7L28_00990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B7L28_00990 PF03466 LysR substrate binding domain B7L28_00995 PF01810 LysE type translocator B7L28_01000 PF03601 Conserved hypothetical protein 698 B7L28_01005 PF00484 Carbonic anhydrase B7L28_01015 PF00202 Aminotransferase class-III B7L28_01020 PF03605 Anaerobic c4-dicarboxylate membrane transporter B7L28_01030 PF01475 Ferric uptake regulator family B7L28_01035 PF00950 ABC 3 transport family B7L28_01040 PF00005 ABC transporter B7L28_01045 PF01297 Zinc-uptake complex component A periplasmic B7L28_01080 PF01168 Alanine racemase, N-terminal domain B7L28_01080 PF00842 Alanine racemase, C-terminal domain B7L28_01085 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain B7L28_01085 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain B7L28_01090 PF04055 Radical SAM superfamily B7L28_01095 PF01228 Glycine radical B7L28_01095 PF02901 Pyruvate formate lyase-like B7L28_01100 PF02901 Pyruvate formate lyase-like B7L28_01100 PF01228 Glycine radical B7L28_01105 PF00892 EamA-like transporter family B7L28_01115 PF09383 NIL domain B7L28_01115 PF00005 ABC transporter B7L28_01120 PF00528 Binding-protein-dependent transport system inner membrane component B7L28_01125 PF03180 NLPA lipoprotein B7L28_01130 PF00939 Sodium:sulfate symporter transmembrane region B7L28_01150 PF00395 S-layer homology domain B7L28_01170 PF01470 Pyroglutamyl peptidase B7L28_01175 PF04966 Carbohydrate-selective porin, OprB family B7L28_01175 PF00395 S-layer homology domain B7L28_01180 PF13407 Periplasmic binding protein domain B7L28_01185 PF02653 Branched-chain amino acid transport system / permease component B7L28_01190 PF00005 ABC transporter B7L28_01195 PF05025 RbsD / FucU transport protein family B7L28_01200 PF00294 pfkB family carbohydrate kinase B7L28_01215 PF00005 ABC transporter B7L28_01220 PF00005 ABC transporter B7L28_01225 PF02361 Cobalt transport protein B7L28_01225 PF00005 ABC transporter B7L28_01245 PF02811 PHP domain B7L28_01250 PF01634 ATP phosphoribosyltransferase B7L28_01255 PF00815 Histidinol dehydrogenase B7L28_01260 PF00475 Imidazoleglycerol-phosphate dehydratase B7L28_01265 PF00977 Histidine biosynthesis protein B7L28_01270 PF00977 Histidine biosynthesis protein B7L28_01275 PF01502 Phosphoribosyl-AMP cyclohydrolase B7L28_01280 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase B7L28_01285 PF00155 Aminotransferase class I and II B7L28_01290 PF00117 Glutamine amidotransferase class-I B7L28_01295 PF02554 Carbon starvation protein CstA B7L28_01295 PF13722 5TM C-terminal transporter carbon starvation CstA B7L28_01300 PF00909 Ammonium Transporter Family B7L28_01305 PF00543 Nitrogen regulatory protein P-II B7L28_01345 PF14489 QueF-like protein B7L28_01355 PF06426 Serine acetyltransferase, N-terminal B7L28_01355 PF00132 Bacterial transferase hexapeptide (six repeats) B7L28_01360 PF00210 Ferritin-like domain B7L28_01375 PF01566 Natural resistance-associated macrophage protein B7L28_01385 PF03883 Peroxide stress protein YaaA B7L28_01390 PF06968 Biotin and Thiamin Synthesis associated domain B7L28_01390 PF04055 Radical SAM superfamily B7L28_01400 PF03144 Elongation factor Tu domain 2 B7L28_01400 PF03764 Elongation factor G, domain IV B7L28_01400 PF00009 Elongation factor Tu GTP binding domain B7L28_01400 PF00679 Elongation factor G C-terminus B7L28_01400 PF14492 Elongation Factor G, domain II B7L28_01405 PF04074 YhcH/YjgK/YiaL B7L28_01410 PF00892 EamA-like transporter family B7L28_01420 PF18543 Intracellular delivery domain B7L28_01420 PF02661 Fic/DOC family B7L28_01430 PF01546 Peptidase family M20/M25/M40 B7L28_01430 PF07687 Peptidase dimerisation domain B7L28_01435 PF07690 Major Facilitator Superfamily B7L28_01455 PF00591 Glycosyl transferase family, a/b domain B7L28_01455 PF02885 Glycosyl transferase family, helical bundle domain B7L28_01455 PF00117 Glutamine amidotransferase class-I B7L28_01470 PF00291 Pyridoxal-phosphate dependent enzyme B7L28_01475 PF00290 Tryptophan synthase alpha chain B7L28_01485 PF05656 Protein of unknown function (DUF805) B7L28_01495 PF01053 Cys/Met metabolism PLP-dependent enzyme B7L28_01500 PF00155 Aminotransferase class I and II B7L28_01505 PF04204 Homoserine O-succinyltransferase B7L28_01510 PF01053 Cys/Met metabolism PLP-dependent enzyme B7L28_01520 PF02632 BioY family B7L28_01530 PF03773 Predicted permease B7L28_01535 PF07683 Cobalamin synthesis protein cobW C-terminal domain B7L28_01535 PF02492 CobW/HypB/UreG, nucleotide-binding domain B7L28_01540 PF07687 Peptidase dimerisation domain B7L28_01540 PF01546 Peptidase family M20/M25/M40 B7L28_01545 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain B7L28_01545 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain B7L28_01545 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family B7L28_01550 PF02540 NAD synthase B7L28_01555 PF17763 Glutaminase/Asparaginase C-terminal domain B7L28_01555 PF00710 Asparaginase, N-terminal B7L28_01565 PF00924 Mechanosensitive ion channel B7L28_01565 PF05552 Conserved TM helix B7L28_01570 PF00768 D-alanyl-D-alanine carboxypeptidase B7L28_01570 PF07943 Penicillin-binding protein 5, C-terminal domain B7L28_01580 PF08331 Domain of unknown function (DUF1730) B7L28_01590 PF01799 [2Fe-2S] binding domain B7L28_01590 PF00111 2Fe-2S iron-sulfur cluster binding domain B7L28_01595 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain B7L28_01595 PF01799 [2Fe-2S] binding domain B7L28_01595 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase B7L28_01605 PF02348 Cytidylyltransferase B7L28_01610 PF02625 XdhC and CoxI family B7L28_01610 PF13478 XdhC Rossmann domain B7L28_01615 PF02625 XdhC and CoxI family B7L28_01615 PF13478 XdhC Rossmann domain B7L28_01625 PF02457 DisA bacterial checkpoint controller nucleotide-binding B7L28_01640 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II B7L28_01640 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III B7L28_01640 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I B7L28_01640 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain B7L28_01650 PF01380 SIS domain B7L28_01655 PF00579 tRNA synthetases class I (W and Y) B7L28_01665 PF00497 Bacterial extracellular solute-binding proteins, family 3 B7L28_01670 PF00528 Binding-protein-dependent transport system inner membrane component B7L28_01675 PF00005 ABC transporter B7L28_01685 PF00582 Universal stress protein family B7L28_01690 PF01022 Bacterial regulatory protein, arsR family B7L28_01705 PF00528 Binding-protein-dependent transport system inner membrane component B7L28_01710 PF03459 TOBE domain B7L28_01710 PF00005 ABC transporter B7L28_01720 PF08543 Phosphomethylpyrimidine kinase B7L28_01725 PF02110 Hydroxyethylthiazole kinase family B7L28_01730 PF02915 Rubrerythrin B7L28_01740 PF02769 AIR synthase related protein, C-terminal domain B7L28_01740 PF00586 AIR synthase related protein, N-terminal domain B7L28_01755 PF13784 Fic/DOC family N-terminal B7L28_01755 PF02661 Fic/DOC family B7L28_01760 PF00881 Nitroreductase family B7L28_01765 PF04226 Transglycosylase associated protein B7L28_01770 PF05532 CsbD-like B7L28_01775 PF01926 50S ribosome-binding GTPase B7L28_01775 PF06071 Protein of unknown function (DUF933) B7L28_01785 PF01113 Dihydrodipicolinate reductase, N-terminus B7L28_01785 PF16654 Diaminopimelic acid dehydrogenase C-terminal domain B7L28_01790 PF03797 Autotransporter beta-domain B7L28_01790 PF03212 Pertactin B7L28_01810 PF01250 Ribosomal protein S6 B7L28_01815 PF00436 Single-strand binding protein family B7L28_01820 PF01084 Ribosomal protein S18 B7L28_01830 PF02390 Putative methyltransferase B7L28_01835 PF01098 Cell cycle protein B7L28_01840 PF00860 Permease family B7L28_01845 PF01972 Serine dehydrogenase proteinase B7L28_01845 PF01957 NfeD-like C-terminal, partner-binding B7L28_01850 PF12127 SigmaW regulon antibacterial B7L28_01880 PF07687 Peptidase dimerisation domain B7L28_01880 PF01546 Peptidase family M20/M25/M40 B7L28_01890 PF00497 Bacterial extracellular solute-binding proteins, family 3 B7L28_01895 PF02574 Homocysteine S-methyltransferase B7L28_01900 PF00528 Binding-protein-dependent transport system inner membrane component B7L28_01905 PF00005 ABC transporter B7L28_01920 PF01613 Flavin reductase like domain B7L28_01920 PF00753 Metallo-beta-lactamase superfamily B7L28_01925 PF00586 AIR synthase related protein, N-terminal domain B7L28_01925 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain B7L28_01925 PF02769 AIR synthase related protein, C-terminal domain B7L28_01930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B7L28_01930 PF03466 LysR substrate binding domain B7L28_01935 PF00156 Phosphoribosyl transferase domain B7L28_01950 PF00731 AIR carboxylase B7L28_01955 PF01259 SAICAR synthetase B7L28_01960 PF13537 Glutamine amidotransferase domain B7L28_01960 PF00156 Phosphoribosyl transferase domain B7L28_01965 PF02769 AIR synthase related protein, C-terminal domain B7L28_01965 PF00586 AIR synthase related protein, N-terminal domain B7L28_01970 PF00551 Formyl transferase B7L28_01975 PF01808 AICARFT/IMPCHase bienzyme B7L28_01975 PF02142 MGS-like domain B7L28_01980 PF02843 Phosphoribosylglycinamide synthetase, C domain B7L28_01980 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain B7L28_01980 PF02844 Phosphoribosylglycinamide synthetase, N domain B7L28_01985 PF00425 chorismate binding enzyme B7L28_01990 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain B7L28_01990 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain B7L28_01990 PF16582 Middle domain of thiamine pyrophosphate B7L28_01995 PF00561 alpha/beta hydrolase fold B7L28_02000 PF00378 Enoyl-CoA hydratase/isomerase B7L28_02005 PF13193 AMP-binding enzyme C-terminal domain B7L28_02005 PF00501 AMP-binding enzyme B7L28_02010 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain B7L28_02010 PF13378 Enolase C-terminal domain-like B7L28_02070 PF00795 Carbon-nitrogen hydrolase B7L28_02075 PF01522 Polysaccharide deacetylase B7L28_02075 PF14883 Hypothetical glycosyl hydrolase family 13 B7L28_02080 PF09992 Phosphodiester glycosidase B7L28_02080 PF12708 Pectate lyase superfamily protein B7L28_02090 PF01075 Glycosyltransferase family 9 (heptosyltransferase) B7L28_02100 PF00364 Biotin-requiring enzyme B7L28_02100 PF00682 HMGL-like B7L28_02100 PF02436 Conserved carboxylase domain B7L28_02105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B7L28_02105 PF00672 HAMP domain B7L28_02105 PF13426 PAS domain B7L28_02105 PF00512 His Kinase A (phospho-acceptor) domain B7L28_02110 PF00486 Transcriptional regulatory protein, C terminal B7L28_02110 PF00072 Response regulator receiver domain B7L28_02115 PF13180 PDZ domain B7L28_02120 PF03551 Transcriptional regulator PadR-like family B7L28_02135 PF00156 Phosphoribosyl transferase domain B7L28_02140 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family B7L28_02145 PF14579 Helix-hairpin-helix motif B7L28_02145 PF00929 Exonuclease B7L28_02145 PF02811 PHP domain B7L28_02145 PF07733 Bacterial DNA polymerase III alpha NTPase domain B7L28_02145 PF11490 DNA polymerase III polC-type N-terminus II B7L28_02145 PF17657 Bacterial DNA polymerase III alpha subunit finger domain B7L28_02150 PF01791 DeoC/LacD family aldolase B7L28_02155 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain B7L28_02155 PF02885 Glycosyl transferase family, helical bundle domain B7L28_02155 PF00591 Glycosyl transferase family, a/b domain B7L28_02160 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region B7L28_02165 PF03180 NLPA lipoprotein B7L28_02170 PF01040 UbiA prenyltransferase family B7L28_02185 PF01042 Endoribonuclease L-PSP B7L28_02190 PF03313 Serine dehydratase alpha chain B7L28_02195 PF07690 Major Facilitator Superfamily B7L28_02210 PF14437 MafB19-like deaminase B7L28_02215 PF03458 UPF0126 domain B7L28_02230 PF01063 Amino-transferase class IV B7L28_02235 PF00005 ABC transporter B7L28_02235 PF09383 NIL domain B7L28_02240 PF00528 Binding-protein-dependent transport system inner membrane component B7L28_02245 PF01371 Trp repressor protein B7L28_02250 PF01925 Sulfite exporter TauE/SafE B7L28_02265 PF06803 Protein of unknown function (DUF1232) B7L28_02270 PF03061 Thioesterase superfamily B7L28_02275 PF01177 Asp/Glu/Hydantoin racemase B7L28_02295 PF00850 Histone deacetylase domain B7L28_02300 PF01138 3' exoribonuclease family, domain 1 B7L28_02300 PF03725 3' exoribonuclease family, domain 2 B7L28_02305 PF01725 Ham1 family B7L28_02315 PF02675 S-adenosylmethionine decarboxylase B7L28_02320 PF00390 Malic enzyme, N-terminal domain B7L28_02320 PF03949 Malic enzyme, NAD binding domain B7L28_02345 PF17871 AAA lid domain B7L28_02345 PF00004 ATPase family associated with various cellular activities (AAA) B7L28_02345 PF10431 C-terminal, D2-small domain, of ClpB protein B7L28_02345 PF07724 AAA domain (Cdc48 subfamily) B7L28_02350 PF03746 LamB/YcsF family B7L28_02355 PF01566 Natural resistance-associated macrophage protein B7L28_02360 PF02682 Carboxyltransferase domain, subdomain C and D B7L28_02365 PF02626 Carboxyltransferase domain, subdomain A and B B7L28_02370 PF03895 YadA-like membrane anchor domain B7L28_02370 PF05658 Head domain of trimeric autotransporter adhesin B7L28_02370 PF05662 Coiled stalk of trimeric autotransporter adhesin B7L28_02380 PF01554 MatE B7L28_02385 PF02540 NAD synthase B7L28_02385 PF00958 GMP synthase C terminal domain B7L28_02385 PF00117 Glutamine amidotransferase class-I B7L28_02395 PF01594 AI-2E family transporter B7L28_02405 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain B7L28_02405 PF07992 Pyridine nucleotide-disulphide oxidoreductase B7L28_02415 PF00375 Sodium:dicarboxylate symporter family B7L28_02420 PF01209 ubiE/COQ5 methyltransferase family B7L28_02445 PF01522 Polysaccharide deacetylase B7L28_02450 PF00994 Probable molybdopterin binding domain B7L28_02460 PF01384 Phosphate transporter family B7L28_02465 PF02082 Transcriptional regulator B7L28_02470 PF01654 Cytochrome bd terminal oxidase subunit I B7L28_02475 PF02322 Cytochrome bd terminal oxidase subunit II B7L28_02480 PF00664 ABC transporter transmembrane region B7L28_02480 PF00005 ABC transporter B7L28_02500 PF00528 Binding-protein-dependent transport system inner membrane component B7L28_02505 PF00528 Binding-protein-dependent transport system inner membrane component B7L28_02505 PF12911 N-terminal TM domain of oligopeptide transport permease C B7L28_02510 PF08352 Oligopeptide/dipeptide transporter, C-terminal region B7L28_02510 PF00005 ABC transporter B7L28_02515 PF00005 ABC transporter B7L28_02515 PF08352 Oligopeptide/dipeptide transporter, C-terminal region B7L28_02525 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle B7L28_02530 PF17676 LD-carboxypeptidase C-terminal domain B7L28_02530 PF02016 LD-carboxypeptidase N-terminal domain B7L28_02535 PF01546 Peptidase family M20/M25/M40 B7L28_02535 PF07687 Peptidase dimerisation domain B7L28_02540 PF12848 ABC transporter B7L28_02540 PF00005 ABC transporter B7L28_02545 PF01227 GTP cyclohydrolase I B7L28_02550 PF00809 Pterin binding enzyme B7L28_02555 PF02152 Dihydroneopterin aldolase B7L28_02560 PF01227 GTP cyclohydrolase I B7L28_02560 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) B7L28_02570 PF04226 Transglycosylase associated protein B7L28_02575 PF00056 lactate/malate dehydrogenase, NAD binding domain B7L28_02575 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain B7L28_02585 PF00575 S1 RNA binding domain B7L28_02595 PF11734 TilS substrate C-terminal domain B7L28_02595 PF01171 PP-loop family B7L28_02600 PF11734 TilS substrate C-terminal domain B7L28_02600 PF00156 Phosphoribosyl transferase domain B7L28_02600 PF01171 PP-loop family B7L28_02605 PF00004 ATPase family associated with various cellular activities (AAA) B7L28_02605 PF06480 FtsH Extracellular B7L28_02605 PF01434 Peptidase family M41 B7L28_02605 PF17862 AAA+ lid domain B7L28_02625 PF02237 Biotin protein ligase C terminal domain B7L28_02625 PF03099 Biotin/lipoate A/B protein ligase family B7L28_02625 PF08279 HTH domain B7L28_02630 PF03309 Type III pantothenate kinase B7L28_02635 PF01207 Dihydrouridine synthase (Dus) B7L28_02640 PF03449 Transcription elongation factor, N-terminal B7L28_02640 PF01272 Transcription elongation factor, GreA/GreB, C-term B7L28_02645 PF00152 tRNA synthetases class II (D, K and N) B7L28_02645 PF01336 OB-fold nucleic acid binding domain B7L28_02650 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain B7L28_02650 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain B7L28_02650 PF01276 Orn/Lys/Arg decarboxylase, major domain B7L28_02655 PF13520 Amino acid permease B7L28_02665 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) B7L28_02665 PF02403 Seryl-tRNA synthetase N-terminal domain B7L28_02670 PF00923 Transaldolase/Fructose-6-phosphate aldolase B7L28_02675 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded B7L28_02680 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) B7L28_02705 PF02405 Permease MlaE B7L28_02710 PF00005 ABC transporter B7L28_02750 PF00132 Bacterial transferase hexapeptide (six repeats) B7L28_02750 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD B7L28_02755 PF03279 Bacterial lipid A biosynthesis acyltransferase B7L28_02760 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase B7L28_02765 PF07977 FabA-like domain B7L28_02770 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 B7L28_02770 PF00132 Bacterial transferase hexapeptide (six repeats) B7L28_02775 PF06230 LpxI C-terminal domain B7L28_02775 PF17930 LpxI N-terminal domain B7L28_02780 PF02684 Lipid-A-disaccharide synthetase B7L28_02785 PF00005 ABC transporter B7L28_02785 PF00664 ABC transporter transmembrane region B7L28_02790 PF00534 Glycosyl transferases group 1 B7L28_02790 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) B7L28_02795 PF02606 Tetraacyldisaccharide-1-P 4'-kinase B7L28_02800 PF02348 Cytidylyltransferase B7L28_02805 PF00793 DAHP synthetase I family B7L28_02810 PF01380 SIS domain B7L28_02810 PF00571 CBS domain B7L28_02835 PF00005 ABC transporter B7L28_02845 PF11283 Protein of unknown function (DUF3084) B7L28_02855 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) B7L28_02855 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 B7L28_02860 PF10502 Signal peptidase, peptidase S26 B7L28_02865 PF00395 S-layer homology domain B7L28_02875 PF00665 Integrase core domain B7L28_02880 PF01695 IstB-like ATP binding protein B7L28_02885 PF03459 TOBE domain B7L28_02900 PF06965 Na+/H+ antiporter 1 B7L28_02905 PF06965 Na+/H+ antiporter 1 B7L28_02910 PF07501 G5 domain B7L28_02910 PF03990 G5-linked-Ubiquitin-like domain B7L28_02910 PF06725 3D domain B7L28_02915 PF09182 Bacterial purine repressor, N-terminal B7L28_02915 PF00156 Phosphoribosyl transferase domain B7L28_02920 PF00132 Bacterial transferase hexapeptide (six repeats) B7L28_02920 PF12804 MobA-like NTP transferase domain B7L28_02925 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase B7L28_02925 PF14572 Phosphoribosyl synthetase-associated domain B7L28_02930 PF01195 Peptidyl-tRNA hydrolase B7L28_02935 PF01276 Orn/Lys/Arg decarboxylase, major domain B7L28_02935 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain B7L28_02945 PF12169 DNA polymerase III subunits gamma and tau domain III B7L28_02950 PF04468 PSP1 C-terminal conserved region B7L28_02955 PF05175 Methyltransferase small domain B7L28_02960 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases B7L28_02965 PF08264 Anticodon-binding domain of tRNA B7L28_02965 PF09334 tRNA synthetases class I (M) B7L28_02965 PF01588 Putative tRNA binding domain B7L28_02970 PF01026 TatD related DNase B7L28_02975 PF02541 Ppx/GppA phosphatase family B7L28_02985 PF13090 Polyphosphate kinase C-terminal domain 2 B7L28_02985 PF13089 Polyphosphate kinase N-terminal domain B7L28_02985 PF02503 Polyphosphate kinase middle domain B7L28_02985 PF17941 Polyphosphate kinase C-terminal domain 1 B7L28_02990 PF01476 LysM domain B7L28_02990 PF06725 3D domain B7L28_02995 PF01625 Peptide methionine sulfoxide reductase B7L28_02995 PF01641 SelR domain B7L28_03000 PF01717 Cobalamin-independent synthase, Catalytic domain B7L28_03005 PF03466 LysR substrate binding domain B7L28_03005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B7L28_03010 PF13331 Domain of unknown function (DUF4093) B7L28_03010 PF01751 Toprim domain B7L28_03015 PF00398 Ribosomal RNA adenine dimethylase B7L28_03020 PF03616 Sodium/glutamate symporter B7L28_03025 PF03144 Elongation factor Tu domain 2 B7L28_03025 PF16658 Class II release factor RF3, C-terminal domain B7L28_03025 PF00009 Elongation factor Tu GTP binding domain B7L28_03030 PF01131 DNA topoisomerase B7L28_03030 PF01751 Toprim domain B7L28_03035 PF00270 DEAD/DEAH box helicase B7L28_03035 PF00271 Helicase conserved C-terminal domain B7L28_03045 PF04023 FeoA domain B7L28_03045 PF07670 Nucleoside recognition B7L28_03045 PF02421 Ferrous iron transport protein B B7L28_03045 PF17910 FeoB cytosolic helical domain B7L28_03045 PF07664 Ferrous iron transport protein B C terminus B7L28_03085 PF04055 Radical SAM superfamily B7L28_03085 PF06463 Molybdenum Cofactor Synthesis C B7L28_03090 PF07503 HypF finger B7L28_03090 PF01300 Telomere recombination B7L28_03090 PF00708 Acylphosphatase B7L28_03090 PF17788 HypF Kae1-like domain B7L28_03095 PF01455 HupF/HypC family B7L28_03100 PF01924 Hydrogenase formation hypA family B7L28_03105 PF00586 AIR synthase related protein, N-terminal domain B7L28_03105 PF02769 AIR synthase related protein, C-terminal domain B7L28_03125 PF00483 Nucleotidyl transferase B7L28_03135 PF02632 BioY family B7L28_03145 PF04073 Aminoacyl-tRNA editing domain B7L28_03155 PF16363 GDP-mannose 4,6 dehydratase B7L28_03165 PF00342 Phosphoglucose isomerase B7L28_03175 PF00263 Bacterial type II and III secretion system protein B7L28_03175 PF03958 Bacterial type II/III secretion system short domain B7L28_03190 PF02653 Branched-chain amino acid transport system / permease component B7L28_03195 PF02653 Branched-chain amino acid transport system / permease component B7L28_03195 PF11862 Domain of unknown function (DUF3382) B7L28_03200 PF12399 Branched-chain amino acid ATP-binding cassette transporter B7L28_03200 PF00005 ABC transporter B7L28_03205 PF00005 ABC transporter B7L28_03215 PF02719 Polysaccharide biosynthesis protein B7L28_03225 PF13614 AAA domain B7L28_03230 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family B7L28_03235 PF02397 Bacterial sugar transferase B7L28_03240 PF04991 LicD family B7L28_03245 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase B7L28_03250 PF16363 GDP-mannose 4,6 dehydratase B7L28_03280 PF01370 NAD dependent epimerase/dehydratase family B7L28_03285 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain B7L28_03285 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain B7L28_03300 PF13597 Anaerobic ribonucleoside-triphosphate reductase B7L28_03300 PF03477 ATP cone domain B7L28_03315 PF12464 Maltose acetyltransferase B7L28_03315 PF00132 Bacterial transferase hexapeptide (six repeats) B7L28_03315 PF14602 Hexapeptide repeat of succinyl-transferase B7L28_03320 PF03060 Nitronate monooxygenase B7L28_03325 PF00301 Rubredoxin B7L28_03340 PF01783 Ribosomal L32p protein family B7L28_03350 PF02504 Fatty acid synthesis protein B7L28_03355 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal B7L28_03355 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III B7L28_03360 PF03060 Nitronate monooxygenase B7L28_03365 PF00698 Acyl transferase domain B7L28_03375 PF00550 Phosphopantetheine attachment site B7L28_03380 PF03060 Nitronate monooxygenase B7L28_03385 PF00109 Beta-ketoacyl synthase, N-terminal domain B7L28_03385 PF02801 Beta-ketoacyl synthase, C-terminal domain B7L28_03390 PF14622 Ribonuclease-III-like B7L28_03390 PF00035 Double-stranded RNA binding motif B7L28_03400 PF02463 RecF/RecN/SMC N terminal domain B7L28_03400 PF06470 SMC proteins Flexible Hinge Domain B7L28_03405 PF02881 SRP54-type protein, helical bundle domain B7L28_03405 PF00448 SRP54-type protein, GTPase domain B7L28_03415 PF12344 Ultra-violet resistance protein B B7L28_03415 PF00271 Helicase conserved C-terminal domain B7L28_03415 PF04851 Type III restriction enzyme, res subunit B7L28_03415 PF02151 UvrB/uvrC motif B7L28_03415 PF17757 UvrB interaction domain B7L28_03420 PF17755 UvrA DNA-binding domain B7L28_03420 PF17760 UvrA interaction domain B7L28_03425 PF01541 GIY-YIG catalytic domain B7L28_03425 PF08459 UvrC Helix-hairpin-helix N-terminal B7L28_03425 PF02151 UvrB/uvrC motif B7L28_03425 PF12826 Helix-hairpin-helix motif B7L28_03430 PF01554 MatE B7L28_03435 PF03741 Integral membrane protein TerC family B7L28_03440 PF03741 Integral membrane protein TerC family B7L28_03445 PF01938 TRAM domain B7L28_03445 PF05958 tRNA (Uracil-5-)-methyltransferase B7L28_03465 PF07715 TonB-dependent Receptor Plug Domain B7L28_03465 PF00593 TonB dependent receptor B7L28_03515 PF04055 Radical SAM superfamily B7L28_03525 PF01661 Macro domain B7L28_03535 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain B7L28_03535 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain B7L28_03540 PF01557 Fumarylacetoacetate (FAA) hydrolase family B7L28_03550 PF01063 Amino-transferase class IV B7L28_03565 PF00155 Aminotransferase class I and II B7L28_03565 PF00392 Bacterial regulatory proteins, gntR family B7L28_03570 PF10609 NUBPL iron-transfer P-loop NTPase B7L28_03575 PF00939 Sodium:sulfate symporter transmembrane region B7L28_03580 PF02127 Aminopeptidase I zinc metalloprotease (M18) B7L28_03585 PF00682 HMGL-like B7L28_03585 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain B7L28_03585 PF00364 Biotin-requiring enzyme B7L28_03585 PF00289 Biotin carboxylase, N-terminal domain B7L28_03585 PF02436 Conserved carboxylase domain B7L28_03585 PF02785 Biotin carboxylase C-terminal domain B7L28_03590 PF03477 ATP cone domain B7L28_03600 PF13580 SIS domain B7L28_03605 PF01467 Cytidylyltransferase-like B7L28_03605 PF00294 pfkB family carbohydrate kinase B7L28_03610 PF01370 NAD dependent epimerase/dehydratase family B7L28_03620 PF01075 Glycosyltransferase family 9 (heptosyltransferase) B7L28_03625 PF01075 Glycosyltransferase family 9 (heptosyltransferase) B7L28_03635 PF02127 Aminopeptidase I zinc metalloprotease (M18) B7L28_03655 PF02653 Branched-chain amino acid transport system / permease component B7L28_03660 PF00005 ABC transporter B7L28_03665 PF00312 Ribosomal protein S15 B7L28_03670 PF00013 KH domain B7L28_03670 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain B7L28_03670 PF01138 3' exoribonuclease family, domain 1 B7L28_03670 PF03725 3' exoribonuclease family, domain 2 B7L28_03670 PF00575 S1 RNA binding domain B7L28_03675 PF00692 dUTPase B7L28_03680 PF00004 ATPase family associated with various cellular activities (AAA) B7L28_03680 PF17862 AAA+ lid domain B7L28_03680 PF01434 Peptidase family M41 B7L28_03720 PF00293 NUDIX domain B7L28_03725 PF01676 Metalloenzyme superfamily B7L28_03730 PF01649 Ribosomal protein S20 B7L28_03735 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain B7L28_03735 PF01367 5'-3' exonuclease, C-terminal SAM fold B7L28_03735 PF00476 DNA polymerase family A B7L28_03740 PF01121 Dephospho-CoA kinase B7L28_03745 PF01464 Transglycosylase SLT domain B7L28_03745 PF14718 Soluble lytic murein transglycosylase L domain B7L28_03760 PF13184 NusA-like KH domain B7L28_03760 PF08529 NusA N-terminal domain B7L28_03760 PF00575 S1 RNA binding domain B7L28_03770 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family B7L28_03775 PF11987 Translation-initiation factor 2 B7L28_03775 PF00009 Elongation factor Tu GTP binding domain B7L28_03775 PF04760 Translation initiation factor IF-2, N-terminal region B7L28_03780 PF02033 Ribosome-binding factor A B7L28_03790 PF16198 tRNA pseudouridylate synthase B C-terminal domain B7L28_03790 PF01509 TruB family pseudouridylate synthase (N terminal domain) B7L28_03795 PF01687 Riboflavin kinase B7L28_03795 PF06574 FAD synthetase B7L28_03800 PF01202 Shikimate kinase B7L28_03805 PF13538 UvrD-like helicase C-terminal domain B7L28_03805 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain B7L28_03805 PF14490 Helix-hairpin-helix containing domain B7L28_03810 PF00156 Phosphoribosyl transferase domain B7L28_03815 PF01966 HD domain B7L28_03815 PF00072 Response regulator receiver domain B7L28_03820 PF00497 Bacterial extracellular solute-binding proteins, family 3 B7L28_03825 PF00528 Binding-protein-dependent transport system inner membrane component B7L28_03830 PF00005 ABC transporter B7L28_03835 PF00313 'Cold-shock' DNA-binding domain B7L28_03840 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein B7L28_03840 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus B7L28_03845 PF07517 SecA DEAD-like domain B7L28_03845 PF07516 SecA Wing and Scaffold domain B7L28_03845 PF02810 SEC-C motif B7L28_03845 PF01043 SecA preprotein cross-linking domain B7L28_03850 PF03462 PCRF domain B7L28_03850 PF00472 RF-1 domain B7L28_03870 PF00456 Transketolase, thiamine diphosphate binding domain B7L28_03875 PF02780 Transketolase, C-terminal domain B7L28_03875 PF02779 Transketolase, pyrimidine binding domain B7L28_03880 PF00005 ABC transporter B7L28_03885 PF02687 FtsX-like permease family B7L28_03885 PF18075 FtsX extracellular domain B7L28_03890 PF01551 Peptidase family M23 B7L28_03895 PF03572 Peptidase family S41 B7L28_03895 PF13180 PDZ domain B7L28_03900 PF01018 GTP1/OBG B7L28_03900 PF09269 Domain of unknown function (DUF1967) B7L28_03900 PF01926 50S ribosome-binding GTPase B7L28_03910 PF00696 Amino acid kinase family B7L28_03910 PF01472 PUA domain B7L28_03915 PF00171 Aldehyde dehydrogenase family B7L28_03920 PF01467 Cytidylyltransferase-like B7L28_03925 PF01966 HD domain B7L28_03930 PF03816 Cell envelope-related transcriptional attenuator domain B7L28_03940 PF13509 S1 domain B7L28_03940 PF17783 CvfB-like winged helix domain B7L28_03945 PF02254 TrkA-N domain B7L28_03945 PF02080 TrkA-C domain B7L28_03950 PF02386 Cation transport protein B7L28_03955 PF00753 Metallo-beta-lactamase superfamily B7L28_03985 PF04463 Protein of unknown function (DUF523) B7L28_03995 PF02616 Segregation and condensation protein ScpA B7L28_04000 PF04079 Segregation and condensation complex subunit ScpB B7L28_04005 PF00849 RNA pseudouridylate synthase B7L28_04005 PF01479 S4 domain B7L28_04015 PF02224 Cytidylate kinase B7L28_04025 PF00575 S1 RNA binding domain B7L28_04025 PF02401 LytB protein B7L28_04030 PF01926 50S ribosome-binding GTPase B7L28_04030 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal B7L28_04035 PF02660 Glycerol-3-phosphate acyltransferase B7L28_04040 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus B7L28_04040 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus B7L28_04050 PF01467 Cytidylyltransferase-like B7L28_04070 PF08340 Domain of unknown function (DUF1732) B7L28_04070 PF03755 YicC-like family, N-terminal region B7L28_04075 PF04025 Domain of unknown function (DUF370) B7L28_04080 PF00625 Guanylate kinase B7L28_04085 PF01192 RNA polymerase Rpb6 B7L28_04090 PF04127 DNA / pantothenate metabolism flavoprotein B7L28_04090 PF02441 Flavoprotein B7L28_04095 PF02772 S-adenosylmethionine synthetase, central domain B7L28_04095 PF02773 S-adenosylmethionine synthetase, C-terminal domain B7L28_04095 PF00438 S-adenosylmethionine synthetase, N-terminal domain B7L28_04100 PF18074 Primosomal protein N C-terminal domain B7L28_04100 PF18319 PriA DNA helicase Cys-rich region (CRR) domain B7L28_04100 PF17764 3′ DNA-binding domain (3′BD) B7L28_04100 PF00271 Helicase conserved C-terminal domain B7L28_04100 PF04851 Type III restriction enzyme, res subunit B7L28_04105 PF01327 Polypeptide deformylase B7L28_04110 PF02911 Formyl transferase, C-terminal domain B7L28_04110 PF00551 Formyl transferase B7L28_04120 PF01189 16S rRNA methyltransferase RsmB/F B7L28_04120 PF01029 NusB family B7L28_04125 PF04055 Radical SAM superfamily B7L28_04135 PF03793 PASTA domain B7L28_04135 PF00069 Protein kinase domain B7L28_04145 PF00834 Ribulose-phosphate 3 epimerase family B7L28_04150 PF00318 Ribosomal protein S2 B7L28_04155 PF00889 Elongation factor TS B7L28_04160 PF00696 Amino acid kinase family B7L28_04165 PF01765 Ribosome recycling factor B7L28_04175 PF01255 Putative undecaprenyl diphosphate synthase B7L28_04185 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain B7L28_04185 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase B7L28_04185 PF13288 DXP reductoisomerase C-terminal domain B7L28_04190 PF17820 PDZ domain B7L28_04190 PF02163 Peptidase family M50 B7L28_04195 PF04551 GcpE protein B7L28_04200 PF04073 Aminoacyl-tRNA editing domain B7L28_04200 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) B7L28_04200 PF03129 Anticodon binding domain B7L28_04205 PF02811 PHP domain B7L28_04215 PF00919 Uncharacterized protein family UPF0004 B7L28_04215 PF01938 TRAM domain B7L28_04215 PF04055 Radical SAM superfamily B7L28_04220 PF05192 MutS domain III B7L28_04220 PF05188 MutS domain II B7L28_04220 PF01624 MutS domain I B7L28_04220 PF05190 MutS family domain IV B7L28_04220 PF00488 MutS domain V B7L28_04225 PF01119 DNA mismatch repair protein, C-terminal domain B7L28_04225 PF08676 MutL C terminal dimerisation domain B7L28_04230 PF04445 Putative SAM-dependent methyltransferase B7L28_04240 PF06838 Methionine gamma-lyase B7L28_04250 PF03144 Elongation factor Tu domain 2 B7L28_04250 PF00009 Elongation factor Tu GTP binding domain B7L28_04250 PF06421 GTP-binding protein LepA C-terminus B7L28_04250 PF00679 Elongation factor G C-terminus B7L28_04255 PF04055 Radical SAM superfamily B7L28_04255 PF06969 HemN C-terminal domain B7L28_04265 PF01628 HrcA protein C terminal domain B7L28_04270 PF01025 GrpE B7L28_04280 PF00684 DnaJ central domain B7L28_04280 PF01556 DnaJ C terminal domain B7L28_04280 PF00226 DnaJ domain B7L28_04290 PF04452 RNA methyltransferase B7L28_04295 PF00919 Uncharacterized protein family UPF0004 B7L28_04295 PF04055 Radical SAM superfamily B7L28_04295 PF01938 TRAM domain B7L28_04300 PF01230 HIT domain B7L28_04305 PF01165 Ribosomal protein S21 B7L28_04310 PF02637 GatB domain B7L28_04310 PF02934 GatB/GatE catalytic domain B7L28_04315 PF00120 Glutamine synthetase, catalytic domain B7L28_04315 PF03951 Glutamine synthetase, beta-Grasp domain B7L28_04320 PF06146 Phosphate-starvation-inducible E B7L28_04325 PF08534 Redoxin B7L28_04330 PF00005 ABC transporter B7L28_04330 PF00664 ABC transporter transmembrane region B7L28_04335 PF00664 ABC transporter transmembrane region B7L28_04335 PF00005 ABC transporter B7L28_04340 PF00588 SpoU rRNA Methylase family B7L28_04340 PF08032 RNA 2'-O ribose methyltransferase substrate binding B7L28_04360 PF03447 Homoserine dehydrogenase, NAD binding domain B7L28_04360 PF01842 ACT domain B7L28_04360 PF00742 Homoserine dehydrogenase B7L28_04365 PF00288 GHMP kinases N terminal domain B7L28_04365 PF08544 GHMP kinases C terminal B7L28_04370 PF01435 Peptidase family M48 B7L28_04375 PF00334 Nucleoside diphosphate kinase B7L28_04380 PF01923 Cobalamin adenosyltransferase B7L28_04390 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase B7L28_04395 PF07685 CobB/CobQ-like glutamine amidotransferase domain B7L28_04400 PF03186 CobD/Cbib protein B7L28_04410 PF00288 GHMP kinases N terminal domain B7L28_04415 PF00155 Aminotransferase class I and II B7L28_04420 PF00300 Histidine phosphatase superfamily (branch 1) B7L28_04425 PF01479 S4 domain B7L28_04425 PF00849 RNA pseudouridylate synthase B7L28_04430 PF01321 Creatinase/Prolidase N-terminal domain B7L28_04430 PF00557 Metallopeptidase family M24 B7L28_04435 PF09285 Elongation factor P, C-terminal B7L28_04435 PF08207 Elongation factor P (EF-P) KOW-like domain B7L28_04435 PF01132 Elongation factor P (EF-P) OB domain B7L28_04450 PF01029 NusB family B7L28_04455 PF00814 Glycoprotease family B7L28_04460 PF02601 Exonuclease VII, large subunit B7L28_04460 PF13742 OB-fold nucleic acid binding domain B7L28_04465 PF02609 Exonuclease VII small subunit B7L28_04470 PF00348 Polyprenyl synthetase B7L28_04480 PF01728 FtsJ-like methyltransferase B7L28_04480 PF01479 S4 domain B7L28_04485 PF01513 ATP-NAD kinase B7L28_04495 PF01316 Arginine repressor, DNA binding domain B7L28_04495 PF02863 Arginine repressor, C-terminal domain B7L28_04500 PF13476 AAA domain B7L28_04505 PF05173 Dihydrodipicolinate reductase, C-terminus B7L28_04505 PF01113 Dihydrodipicolinate reductase, N-terminus B7L28_04510 PF01118 Semialdehyde dehydrogenase, NAD binding domain B7L28_04510 PF02774 Semialdehyde dehydrogenase, dimerisation domain B7L28_04515 PF00701 Dihydrodipicolinate synthetase family B7L28_04520 PF01726 LexA DNA binding domain B7L28_04520 PF00717 Peptidase S24-like B7L28_04530 PF00589 Phage integrase family B7L28_04535 PF04294 VanW like protein B7L28_04540 PF01569 PAP2 superfamily B7L28_04565 PF13649 Methyltransferase domain B7L28_04570 PF01979 Amidohydrolase family B7L28_04575 PF05221 S-adenosyl-L-homocysteine hydrolase B7L28_04575 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain B7L28_04580 PF01008 Initiation factor 2 subunit family B7L28_04585 PF01048 Phosphorylase superfamily B7L28_04590 PF01430 Hsp33 protein B7L28_04595 PF00885 6,7-dimethyl-8-ribityllumazine synthase B7L28_04600 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase B7L28_04600 PF00925 GTP cyclohydrolase II B7L28_04605 PF00677 Lumazine binding domain B7L28_04610 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region B7L28_04610 PF01872 RibD C-terminal domain B7L28_04615 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain B7L28_04615 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain B7L28_04615 PF00205 Thiamine pyrophosphate enzyme, central domain B7L28_04625 PF11490 DNA polymerase III polC-type N-terminus II B7L28_04625 PF07733 Bacterial DNA polymerase III alpha NTPase domain B7L28_04625 PF14579 Helix-hairpin-helix motif B7L28_04625 PF02811 PHP domain B7L28_04625 PF00929 Exonuclease B7L28_04625 PF17657 Bacterial DNA polymerase III alpha subunit finger domain B7L28_04640 PF10531 SLBB domain B7L28_04645 PF02073 Thermophilic metalloprotease (M29) B7L28_04650 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region B7L28_04660 PF00704 Glycosyl hydrolases family 18 B7L28_04660 PF01476 LysM domain B7L28_04665 PF01790 Prolipoprotein diacylglyceryl transferase B7L28_04670 PF01134 Glucose inhibited division protein A B7L28_04675 PF01751 Toprim domain B7L28_04675 PF01396 Topoisomerase DNA binding C4 zinc finger B7L28_04675 PF01131 DNA topoisomerase B7L28_04680 PF02481 DNA recombination-mediator protein A B7L28_04685 PF13335 Magnesium chelatase, subunit ChlI C-terminal B7L28_04685 PF01078 Magnesium chelatase, subunit ChlI B7L28_04690 PF02021 Uncharacterised protein family UPF0102 B7L28_04695 PF01351 Ribonuclease HII B7L28_04700 PF01926 50S ribosome-binding GTPase B7L28_04705 PF01245 Ribosomal protein L19 B7L28_04715 PF02092 Glycyl-tRNA synthetase beta subunit B7L28_04715 PF05746 DALR anticodon binding domain B7L28_04720 PF02091 Glycyl-tRNA synthetase alpha subunit B7L28_04730 PF00872 Transposase, Mutator family B7L28_04735 PF00665 Integrase core domain B7L28_04740 PF01695 IstB-like ATP binding protein B7L28_04760 PF08479 POTRA domain, ShlB-type B7L28_04760 PF17287 POTRA domain B7L28_04760 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB B7L28_04765 PF09861 Lactate racemase N-terminal domain B7L28_04770 PF01969 Protein of unknown function DUF111 B7L28_04775 PF00731 AIR carboxylase B7L28_04790 PF03471 Transporter associated domain B7L28_04790 PF00571 CBS domain B7L28_04790 PF01595 Cyclin M transmembrane N-terminal domain B7L28_04795 PF01926 50S ribosome-binding GTPase B7L28_04795 PF07650 KH domain B7L28_04800 PF02130 Uncharacterized protein family UPF0054 B7L28_04805 PF02562 PhoH-like protein B7L28_04810 PF04055 Radical SAM superfamily B7L28_04810 PF16199 Radical_SAM C-terminal domain B7L28_04825 PF02934 GatB/GatE catalytic domain B7L28_04825 PF02637 GatB domain B7L28_04830 PF01425 Amidase B7L28_04835 PF02686 Glu-tRNAGln amidotransferase C subunit B7L28_04840 PF03119 NAD-dependent DNA ligase C4 zinc finger domain B7L28_04840 PF00533 BRCA1 C Terminus (BRCT) domain B7L28_04840 PF01653 NAD-dependent DNA ligase adenylation domain B7L28_04840 PF03120 NAD-dependent DNA ligase OB-fold domain B7L28_04840 PF12826 Helix-hairpin-helix motif B7L28_04845 PF00580 UvrD/REP helicase N-terminal domain B7L28_04845 PF13361 UvrD-like helicase C-terminal domain B7L28_04850 PF01368 DHH family B7L28_04850 PF02833 DHHA2 domain B7L28_04855 PF00873 AcrB/AcrD/AcrF family B7L28_04860 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion B7L28_04870 PF00155 Aminotransferase class I and II B7L28_04875 PF03744 6-carboxyhexanoate--CoA ligase B7L28_04925 PF01668 SmpB protein B7L28_04930 PF17876 Cold shock domain B7L28_04930 PF08206 Ribonuclease B OB domain B7L28_04930 PF00773 RNB domain B7L28_04930 PF00575 S1 RNA binding domain B7L28_04935 PF03840 Preprotein translocase SecG subunit B7L28_04940 PF04542 Sigma-70 region 2 B7L28_04940 PF08281 Sigma-70, region 4 B7L28_04950 PF08032 RNA 2'-O ribose methyltransferase substrate binding B7L28_04950 PF00588 SpoU rRNA Methylase family B7L28_04955 PF00636 Ribonuclease III domain B7L28_04960 PF09190 DALR domain B7L28_04960 PF01406 tRNA synthetases class I (C) catalytic domain B7L28_04965 PF01758 Sodium Bile acid symporter family B7L28_04970 PF00749 tRNA synthetases class I (E and Q), catalytic domain B7L28_04975 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase B7L28_04975 PF02542 YgbB family B7L28_04985 PF18073 Rubredoxin metal binding domain B7L28_04990 PF00004 ATPase family associated with various cellular activities (AAA) B7L28_04990 PF07724 AAA domain (Cdc48 subfamily) B7L28_04990 PF17871 AAA lid domain B7L28_04990 PF02861 Clp amino terminal domain, pathogenicity island component B7L28_04990 PF10431 C-terminal, D2-small domain, of ClpB protein B7L28_04995 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain B7L28_05000 PF02151 UvrB/uvrC motif B7L28_05005 PF05848 CtsR N-terminal HTH domain B7L28_05005 PF17727 CtsR C-terminal dimerization domain B7L28_05020 PF01592 NifU-like N terminal domain B7L28_05025 PF00266 Aminotransferase class-V B7L28_05035 PF01458 Uncharacterized protein family (UPF0051) B7L28_05040 PF00005 ABC transporter B7L28_05045 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain B7L28_05045 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain B7L28_05055 PF00118 TCP-1/cpn60 chaperonin family B7L28_05060 PF00166 Chaperonin 10 Kd subunit B7L28_05065 PF03861 ANTAR domain B7L28_05065 PF00072 Response regulator receiver domain B7L28_05070 PF12282 Signal transduction histidine kinase B7L28_05070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B7L28_05070 PF07568 Histidine kinase B7L28_05075 PF00814 Glycoprotease family B7L28_05080 PF00583 Acetyltransferase (GNAT) family B7L28_05085 PF00814 Glycoprotease family B7L28_05090 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE B7L28_05095 PF02769 AIR synthase related protein, C-terminal domain B7L28_05095 PF00586 AIR synthase related protein, N-terminal domain B7L28_05105 PF11741 AMIN domain B7L28_05105 PF01520 N-acetylmuramoyl-L-alanine amidase B7L28_05110 PF13567 Domain of unknown function (DUF4131) B7L28_05110 PF00753 Metallo-beta-lactamase superfamily B7L28_05110 PF03772 Competence protein B7L28_05115 PF03853 YjeF-related protein N-terminus B7L28_05115 PF01256 Carbohydrate kinase B7L28_05120 PF01648 4'-phosphopantetheinyl transferase superfamily B7L28_05130 PF01797 Transposase IS200 like B7L28_05140 PF01975 Survival protein SurE B7L28_05150 PF01066 CDP-alcohol phosphatidyltransferase B7L28_05155 PF02666 Phosphatidylserine decarboxylase B7L28_05160 PF03808 Glycosyl transferase WecB/TagA/CpsF family B7L28_05165 PF00571 CBS domain B7L28_05165 PF00478 IMP dehydrogenase / GMP reductase domain B7L28_05170 PF01361 Tautomerase enzyme B7L28_05175 PF00271 Helicase conserved C-terminal domain B7L28_05175 PF00270 DEAD/DEAH box helicase B7L28_05175 PF17191 RecG wedge domain B7L28_05180 PF00830 Ribosomal L28 family B7L28_05185 PF01966 HD domain B7L28_05185 PF13286 Phosphohydrolase-associated domain B7L28_05190 PF03618 Kinase/pyrophosphorylase B7L28_05195 PF00571 CBS domain B7L28_05195 PF08279 HTH domain B7L28_05200 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain B7L28_05200 PF02896 PEP-utilising enzyme, TIM barrel domain B7L28_05200 PF00391 PEP-utilising enzyme, mobile domain B7L28_05225 PF00665 Integrase core domain B7L28_05240 PF00579 tRNA synthetases class I (W and Y) B7L28_05240 PF01479 S4 domain B7L28_05245 PF00912 Transglycosylase B7L28_05245 PF00905 Penicillin binding protein transpeptidase domain B7L28_05250 PF00488 MutS domain V B7L28_05250 PF01713 Smr domain B7L28_05255 PF01136 Peptidase family U32 B7L28_05255 PF12392 Collagenase B7L28_05260 PF01588 Putative tRNA binding domain B7L28_05260 PF03147 Ferredoxin-fold anticodon binding domain B7L28_05260 PF03484 tRNA synthetase B5 domain B7L28_05260 PF03483 B3/4 domain B7L28_05260 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain B7L28_05265 PF01409 tRNA synthetases class II core domain (F) B7L28_05265 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain B7L28_05275 PF12704 MacB-like periplasmic core domain B7L28_05275 PF00005 ABC transporter B7L28_05275 PF02687 FtsX-like permease family B7L28_05280 PF00005 ABC transporter B7L28_05285 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion B7L28_05285 PF00529 HlyD membrane-fusion protein of T1SS B7L28_05290 PF00365 Phosphofructokinase B7L28_05295 PF01202 Shikimate kinase B7L28_05340 PF08334 Type II secretion system (T2SS), protein G B7L28_05340 PF07963 Prokaryotic N-terminal methylation motif B7L28_05345 PF00482 Type II secretion system (T2SS), protein F B7L28_05350 PF00437 Type II/IV secretion system protein B7L28_05355 PF00437 Type II/IV secretion system protein B7L28_05360 PF00113 Enolase, C-terminal TIM barrel domain B7L28_05360 PF03952 Enolase, N-terminal domain B7L28_05370 PF00121 Triosephosphate isomerase B7L28_05375 PF00162 Phosphoglycerate kinase B7L28_05380 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain B7L28_05380 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain B7L28_05385 PF04198 Putative sugar-binding domain B7L28_05395 PF00464 Serine hydroxymethyltransferase B7L28_05400 PF02502 Ribose/Galactose Isomerase B7L28_05405 PF01451 Low molecular weight phosphotyrosine protein phosphatase B7L28_05410 PF03481 Putative GTP-binding controlling metal-binding B7L28_05410 PF01300 Telomere recombination B7L28_05415 PF05175 Methyltransferase small domain B7L28_05415 PF17827 PrmC N-terminal domain B7L28_05420 PF00472 RF-1 domain B7L28_05420 PF03462 PCRF domain B7L28_05425 PF07136 Protein of unknown function (DUF1385) B7L28_05430 PF01197 Ribosomal protein L31 B7L28_05445 PF10576 Iron-sulfur binding domain of endonuclease III B7L28_05445 PF00633 Helix-hairpin-helix motif B7L28_05445 PF00730 HhH-GPD superfamily base excision DNA repair protein B7L28_05465 PF12327 FtsZ family, C-terminal domain B7L28_05465 PF00091 Tubulin/FtsZ family, GTPase domain B7L28_05470 PF06947 Protein of unknown function (DUF1290) B7L28_05485 PF01820 D-ala D-ala ligase N-terminus B7L28_05485 PF07478 D-ala D-ala ligase C-terminus B7L28_05490 PF08245 Mur ligase middle domain B7L28_05490 PF01225 Mur ligase family, catalytic domain B7L28_05490 PF02875 Mur ligase family, glutamate ligase domain B7L28_05495 PF04101 Glycosyltransferase family 28 C-terminal domain B7L28_05495 PF03033 Glycosyltransferase family 28 N-terminal domain B7L28_05500 PF02875 Mur ligase family, glutamate ligase domain B7L28_05500 PF08245 Mur ligase middle domain B7L28_05505 PF00953 Glycosyl transferase family 4 B7L28_05510 PF01225 Mur ligase family, catalytic domain B7L28_05510 PF02875 Mur ligase family, glutamate ligase domain B7L28_05510 PF08245 Mur ligase middle domain B7L28_05515 PF01225 Mur ligase family, catalytic domain B7L28_05515 PF02875 Mur ligase family, glutamate ligase domain B7L28_05515 PF08245 Mur ligase middle domain B7L28_05520 PF04999 Cell division protein FtsL B7L28_05530 PF02381 MraZ protein, putative antitoxin-like B7L28_05540 PF00085 Thioredoxin B7L28_05550 PF00749 tRNA synthetases class I (E and Q), catalytic domain B7L28_05555 PF05193 Peptidase M16 inactive domain B7L28_05555 PF00675 Insulinase (Peptidase family M16) B7L28_05555 PF08367 Peptidase M16C associated B7L28_05565 PF13840 ACT domain B7L28_05565 PF00696 Amino acid kinase family B7L28_05570 PF01880 Desulfoferrodoxin B7L28_05575 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP B7L28_05580 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain B7L28_05580 PF07685 CobB/CobQ-like glutamine amidotransferase domain B7L28_05585 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases B7L28_05590 PF06180 Cobalt chelatase (CbiK) B7L28_05600 PF01695 IstB-like ATP binding protein B7L28_05605 PF00665 Integrase core domain B7L28_05625 PF06180 Cobalt chelatase (CbiK) B7L28_05635 PF00005 ABC transporter B7L28_05640 PF01032 FecCD transport family B7L28_05645 PF02570 Precorrin-8X methylmutase B7L28_05650 PF02571 Precorrin-6x reductase CbiJ/CobK B7L28_05655 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases B7L28_05660 PF01890 Cobalamin synthesis G C-terminus B7L28_05660 PF11760 Cobalamin synthesis G N-terminal B7L28_05660 PF11761 Cobalamin biosynthesis central region B7L28_05665 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases B7L28_05670 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases B7L28_05675 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases B7L28_05680 PF01888 CbiD B7L28_05685 PF04461 Protein of unknown function (DUF520) B7L28_05695 PF00849 RNA pseudouridylate synthase B7L28_05700 PF01116 Fructose-bisphosphate aldolase class-II B7L28_05705 PF01943 Polysaccharide biosynthesis protein B7L28_05705 PF14667 Polysaccharide biosynthesis C-terminal domain B7L28_05715 PF07722 Peptidase C26 B7L28_05720 PF13520 Amino acid permease B7L28_05730 PF13419 Haloacid dehalogenase-like hydrolase B7L28_05800 PF07728 AAA domain (dynein-related subfamily) B7L28_05810 PF13166 AAA domain B7L28_05860 PF01632 Ribosomal protein L35 B7L28_05865 PF00707 Translation initiation factor IF-3, C-terminal domain B7L28_05865 PF05198 Translation initiation factor IF-3, N-terminal domain B7L28_05870 PF00939 Sodium:sulfate symporter transmembrane region B7L28_05880 PF02824 TGS domain B7L28_05880 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) B7L28_05880 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain B7L28_05880 PF03129 Anticodon binding domain B7L28_05910 PF06949 Protein of unknown function (DUF1292) B7L28_05915 PF03652 Holliday junction resolvase B7L28_05920 PF06135 IreB regulatory phosphoprotein B7L28_05930 PF00877 NlpC/P60 family B7L28_05930 PF01476 LysM domain B7L28_05935 PF00535 Glycosyl transferase family 2 B7L28_05945 PF01750 Hydrogenase maturation protease B7L28_05955 PF00374 Nickel-dependent hydrogenase B7L28_05960 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal B7L28_05960 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit B7L28_05975 PF01784 NIF3 (NGG1p interacting factor 3) B7L28_05990 PF01227 GTP cyclohydrolase I B7L28_05995 PF04055 Radical SAM superfamily B7L28_06005 PF04539 Sigma-70 region 3 B7L28_06005 PF04542 Sigma-70 region 2 B7L28_06005 PF00140 Sigma-70 factor, region 1.2 B7L28_06005 PF03979 Sigma-70 factor, region 1.1 B7L28_06005 PF04545 Sigma-70, region 4 B7L28_06010 PF08275 DNA primase catalytic core, N-terminal domain B7L28_06010 PF10410 DnaB-helicase binding domain of primase B7L28_06010 PF01807 CHC2 zinc finger B7L28_06015 PF01966 HD domain B7L28_06015 PF12072 Domain of unknown function (DUF3552) B7L28_06015 PF00013 KH domain B7L28_06025 PF00154 recA bacterial DNA recombination protein B7L28_06030 PF00994 Probable molybdopterin binding domain B7L28_06030 PF18146 Damage-inducible protein CinA KH domain B7L28_06030 PF02464 Competence-damaged protein B7L28_06035 PF00919 Uncharacterized protein family UPF0004 B7L28_06035 PF18693 TRAM domain B7L28_06035 PF04055 Radical SAM superfamily B7L28_06045 PF11842 Domain of unknown function (DUF3362) B7L28_06045 PF04055 Radical SAM superfamily B7L28_06045 PF08497 Radical SAM N-terminal B7L28_06055 PF13491 4TM region of DNA translocase FtsK/SpoIIIE B7L28_06055 PF17854 FtsK alpha domain B7L28_06055 PF01580 FtsK/SpoIIIE family B7L28_06055 PF09397 Ftsk gamma domain B7L28_06060 PF00004 ATPase family associated with various cellular activities (AAA) B7L28_06060 PF16193 AAA C-terminal domain B7L28_06060 PF12002 MgsA AAA+ ATPase C terminal B7L28_06070 PF02938 GAD domain B7L28_06070 PF01336 OB-fold nucleic acid binding domain B7L28_06070 PF00152 tRNA synthetases class II (D, K and N) B7L28_06075 PF13393 Histidyl-tRNA synthetase B7L28_06075 PF03129 Anticodon binding domain B7L28_06080 PF04055 Radical SAM superfamily B7L28_06085 PF01475 Ferric uptake regulator family B7L28_06090 PF00753 Metallo-beta-lactamase superfamily B7L28_06095 PF04607 Region found in RelA / SpoT proteins B7L28_06095 PF13291 ACT domain B7L28_06095 PF02824 TGS domain B7L28_06100 PF17768 RecJ OB domain B7L28_06100 PF10141 Single-strand DNA-specific exonuclease, C terminal domain B7L28_06100 PF02272 DHHA1 domain B7L28_06100 PF01368 DHH family B7L28_06105 PF06968 Biotin and Thiamin Synthesis associated domain B7L28_06105 PF04055 Radical SAM superfamily B7L28_06110 PF03649 Uncharacterised protein family (UPF0014) B7L28_06115 PF00005 ABC transporter B7L28_06120 PF01016 Ribosomal L27 protein B7L28_06130 PF00829 Ribosomal prokaryotic L21 protein B7L28_06140 PF00575 S1 RNA binding domain B7L28_06140 PF10150 Ribonuclease E/G family B7L28_06155 PF01098 Cell cycle protein B7L28_06160 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain B7L28_06165 PF00905 Penicillin binding protein transpeptidase domain B7L28_06175 PF04085 rod shape-determining protein MreC B7L28_06185 PF04002 RadC-like JAB domain B7L28_06190 PF02545 Maf-like protein B7L28_06200 PF00871 Acetokinase family B7L28_06210 PF05636 HIGH Nucleotidyl Transferase B7L28_06215 PF00156 Phosphoribosyl transferase domain B7L28_06220 PF01479 S4 domain B7L28_06220 PF00849 RNA pseudouridylate synthase B7L28_06240 PF02080 TrkA-C domain B7L28_06240 PF03600 Citrate transporter B7L28_06250 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit B7L28_06255 PF00364 Biotin-requiring enzyme B7L28_06265 PF01039 Carboxyl transferase domain B7L28_06280 PF01642 Methylmalonyl-CoA mutase B7L28_06280 PF02310 B12 binding domain B7L28_06290 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain B7L28_06290 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain B7L28_06300 PF02875 Mur ligase family, glutamate ligase domain B7L28_06300 PF08245 Mur ligase middle domain B7L28_06305 PF10458 Valyl tRNA synthetase tRNA binding arm B7L28_06305 PF00133 tRNA synthetases class I (I, L, M and V) B7L28_06305 PF08264 Anticodon-binding domain of tRNA B7L28_06310 PF00902 Sec-independent protein translocase protein (TatC) B7L28_06315 PF00348 Polyprenyl synthetase B7L28_06320 PF01926 50S ribosome-binding GTPase B7L28_06325 PF00004 ATPase family associated with various cellular activities (AAA) B7L28_06325 PF05362 Lon protease (S16) C-terminal proteolytic domain B7L28_06325 PF02190 ATP-dependent protease La (LON) substrate-binding domain B7L28_06330 PF06689 ClpX C4-type zinc finger B7L28_06330 PF10431 C-terminal, D2-small domain, of ClpB protein B7L28_06330 PF07724 AAA domain (Cdc48 subfamily) B7L28_06335 PF00574 Clp protease B7L28_06340 PF05697 Bacterial trigger factor protein (TF) B7L28_06340 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase B7L28_06340 PF05698 Bacterial trigger factor protein (TF) C-terminus B7L28_06345 PF00478 IMP dehydrogenase / GMP reductase domain B7L28_06345 PF00571 CBS domain B7L28_06350 PF02590 Predicted SPOUT methyltransferase B7L28_06355 PF00753 Metallo-beta-lactamase superfamily B7L28_06360 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain B7L28_06365 PF00258 Flavodoxin B7L28_06380 PF00749 tRNA synthetases class I (E and Q), catalytic domain B7L28_06380 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain B7L28_06385 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain B7L28_06385 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain B7L28_06390 PF01741 Large-conductance mechanosensitive channel, MscL B7L28_06395 PF02463 RecF/RecN/SMC N terminal domain B7L28_06405 PF14821 Threonine synthase N terminus B7L28_06405 PF00291 Pyridoxal-phosphate dependent enzyme B7L28_06410 PF04261 Dyp-type peroxidase family B7L28_06430 PF04055 Radical SAM superfamily B7L28_06430 PF06463 Molybdenum Cofactor Synthesis C B7L28_06440 PF00860 Permease family B7L28_06445 PF04961 Formiminotransferase-cyclodeaminase B7L28_06450 PF01268 Formate--tetrahydrofolate ligase B7L28_06455 PF00939 Sodium:sulfate symporter transmembrane region B7L28_06460 PF05683 Fumarase C-terminus B7L28_06465 PF05681 Fumarate hydratase (Fumerase) B7L28_06470 PF17853 GGDEF-like domain B7L28_06470 PF12833 Helix-turn-helix domain B7L28_06485 PF12833 Helix-turn-helix domain B7L28_06485 PF17853 GGDEF-like domain B7L28_06490 PF03453 MoeA N-terminal region (domain I and II) B7L28_06490 PF03454 MoeA C-terminal region (domain IV) B7L28_06490 PF00994 Probable molybdopterin binding domain B7L28_06495 PF12804 MobA-like NTP transferase domain B7L28_06500 PF09515 Thiamine transporter protein (Thia_YuaJ) B7L28_06505 PF00478 IMP dehydrogenase / GMP reductase domain B7L28_06510 PF07690 Major Facilitator Superfamily B7L28_06520 PF00117 Glutamine amidotransferase class-I B7L28_06520 PF00958 GMP synthase C terminal domain B7L28_06520 PF03352 Methyladenine glycosylase B7L28_06520 PF13673 Acetyltransferase (GNAT) domain B7L28_06520 PF13302 Acetyltransferase (GNAT) domain B7L28_06535 PF09827 CRISPR associated protein Cas2 B7L28_06540 PF01867 CRISPR associated protein Cas1 B7L28_06545 PF09659 CRISPR-associated protein (Cas_Csm6) B7L28_06550 PF10040 CRISPR-associated endoribonuclease Cas6 B7L28_06555 PF03787 RAMP superfamily B7L28_06560 PF17953 CRISPR Csm4 C-terminal domain B7L28_06565 PF03787 RAMP superfamily B7L28_06575 PF18211 Csm1 subunit domain B B7L28_06580 PF03606 C4-dicarboxylate anaerobic carrier B7L28_06585 PF01546 Peptidase family M20/M25/M40 B7L28_06585 PF07687 Peptidase dimerisation domain B7L28_06595 PF00202 Aminotransferase class-III B7L28_06600 PF00696 Amino acid kinase family B7L28_06605 PF01118 Semialdehyde dehydrogenase, NAD binding domain B7L28_06610 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain B7L28_06610 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain B7L28_06615 PF01546 Peptidase family M20/M25/M40 B7L28_06615 PF07687 Peptidase dimerisation domain B7L28_06620 PF00484 Carbonic anhydrase B7L28_06625 PF10369 Small subunit of acetolactate synthase B7L28_06625 PF01842 ACT domain B7L28_06630 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain B7L28_06630 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain B7L28_06630 PF00205 Thiamine pyrophosphate enzyme, central domain B7L28_06650 PF13649 Methyltransferase domain B7L28_06655 PF13749 Putative ATP-dependent DNA helicase recG C-terminal B7L28_06655 PF00270 DEAD/DEAH box helicase B7L28_06655 PF17191 RecG wedge domain B7L28_06660 PF04011 LemA family B7L28_06675 PF01451 Low molecular weight phosphotyrosine protein phosphatase B7L28_06705 PF08331 Domain of unknown function (DUF1730) B7L28_06710 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain B7L28_06710 PF01565 FAD binding domain B7L28_06715 PF06133 Control of competence regulator ComK, YlbF/YmcA B7L28_06720 PF00588 SpoU rRNA Methylase family B7L28_06725 PF01967 MoaC family B7L28_06730 PF12706 Beta-lactamase superfamily domain B7L28_06750 PF02080 TrkA-C domain B7L28_06750 PF02254 TrkA-N domain B7L28_06755 PF02386 Cation transport protein B7L28_06760 PF00294 pfkB family carbohydrate kinase B7L28_06765 PF04055 Radical SAM superfamily B7L28_06780 PF02472 Biopolymer transport protein ExbD/TolR B7L28_06785 PF01618 MotA/TolQ/ExbB proton channel family B7L28_06790 PF07715 TonB-dependent Receptor Plug Domain B7L28_06790 PF00593 TonB dependent receptor B7L28_06795 PF12833 Helix-turn-helix domain B7L28_06795 PF07883 Cupin domain B7L28_06805 PF03611 PTS system sugar-specific permease component B7L28_06810 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit B7L28_06815 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 B7L28_06820 PF02256 Iron hydrogenase small subunit B7L28_06820 PF02906 Iron only hydrogenase large subunit, C-terminal domain B7L28_06820 PF00037 4Fe-4S binding domain B7L28_06820 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region B7L28_06825 PF12848 ABC transporter B7L28_06825 PF00005 ABC transporter B7L28_06825 PF16326 ABC transporter C-terminal domain B7L28_06835 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase B7L28_06835 PF04101 Glycosyltransferase family 28 C-terminal domain B7L28_06840 PF00216 Bacterial DNA-binding protein B7L28_06845 PF03819 MazG nucleotide pyrophosphohydrolase domain B7L28_06850 PF01943 Polysaccharide biosynthesis protein B7L28_06850 PF14667 Polysaccharide biosynthesis C-terminal domain B7L28_06855 PF17757 UvrB interaction domain B7L28_06855 PF03461 TRCF domain B7L28_06855 PF02559 CarD-like/TRCF domain B7L28_06855 PF00270 DEAD/DEAH box helicase B7L28_06855 PF00271 Helicase conserved C-terminal domain B7L28_06915 PF17284 Spermidine synthase tetramerisation domain B7L28_06925 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD B7L28_06930 PF00899 ThiF family B7L28_06940 PF13476 AAA domain B7L28_06945 PF00149 Calcineurin-like phosphoesterase B7L28_06945 PF12320 Type 5 capsule protein repressor C-terminal domain B7L28_06950 PF01261 Xylose isomerase-like TIM barrel B7L28_06955 PF01475 Ferric uptake regulator family B7L28_06960 PF00271 Helicase conserved C-terminal domain B7L28_06960 PF00270 DEAD/DEAH box helicase B7L28_06965 PF00665 Integrase core domain B7L28_06970 PF01695 IstB-like ATP binding protein B7L28_06975 PF00291 Pyridoxal-phosphate dependent enzyme B7L28_07005 PF00171 Aldehyde dehydrogenase family B7L28_07010 PF17674 HHH domain B7L28_07010 PF00575 S1 RNA binding domain B7L28_07010 PF09371 Tex-like protein N-terminal domain B7L28_07010 PF16921 Tex protein YqgF-like domain B7L28_07015 PF00186 Dihydrofolate reductase B7L28_07020 PF00303 Thymidylate synthase B7L28_07025 PF00271 Helicase conserved C-terminal domain B7L28_07025 PF00570 HRDC domain B7L28_07025 PF16124 RecQ zinc-binding B7L28_07025 PF09382 RQC domain B7L28_07025 PF00270 DEAD/DEAH box helicase B7L28_07030 PF00474 Sodium:solute symporter family B7L28_07040 PF13847 Methyltransferase domain B7L28_07040 PF10119 Predicted methyltransferase regulatory domain B7L28_07045 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain B7L28_07045 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase B7L28_07045 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II B7L28_07045 PF12838 4Fe-4S dicluster domain B7L28_07045 PF10371 Domain of unknown function B7L28_07045 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg B7L28_07050 PF03466 LysR substrate binding domain B7L28_07050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B7L28_07060 PF07690 Major Facilitator Superfamily B7L28_07065 PF01027 Inhibitor of apoptosis-promoting Bax1 B7L28_07080 PF04223 Citrate lyase, alpha subunit (CitF) B7L28_07085 PF03328 HpcH/HpaI aldolase/citrate lyase family B7L28_07090 PF06857 Malonate decarboxylase delta subunit (MdcD) B7L28_07095 PF00939 Sodium:sulfate symporter transmembrane region B7L28_07100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B7L28_07100 PF03466 LysR substrate binding domain B7L28_07105 PF02887 Pyruvate kinase, alpha/beta domain B7L28_07105 PF00224 Pyruvate kinase, barrel domain B7L28_07105 PF00391 PEP-utilising enzyme, mobile domain B7L28_07110 PF01336 OB-fold nucleic acid binding domain B7L28_07110 PF14579 Helix-hairpin-helix motif B7L28_07110 PF17657 Bacterial DNA polymerase III alpha subunit finger domain B7L28_07110 PF07733 Bacterial DNA polymerase III alpha NTPase domain B7L28_07110 PF02811 PHP domain B7L28_07130 PF05594 Haemagluttinin repeat B7L28_07130 PF13332 Hemagglutinin repeat B7L28_07130 PF05860 haemagglutination activity domain B7L28_07130 PF04829 Pre-toxin domain with VENN motif B7L28_07150 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB B7L28_07150 PF17287 POTRA domain B7L28_07150 PF08479 POTRA domain, ShlB-type B7L28_07190 PF00202 Aminotransferase class-III B7L28_07195 PF00490 Delta-aminolevulinic acid dehydratase B7L28_07200 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases B7L28_07205 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain B7L28_07205 PF03900 Porphobilinogen deaminase, C-terminal domain B7L28_07210 PF01488 Shikimate / quinate 5-dehydrogenase B7L28_07210 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain B7L28_07210 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain B7L28_07215 PF14824 Sirohaem biosynthesis protein central B7L28_07220 PF17774 Putative RNA-binding domain in YlmH B7L28_07220 PF01479 S4 domain B7L28_07225 PF14748 Pyrroline-5-carboxylate reductase dimerisation B7L28_07225 PF03807 NADP oxidoreductase coenzyme F420-dependent B7L28_07230 PF04472 Cell division protein SepF B7L28_07235 PF01168 Alanine racemase, N-terminal domain B7L28_07250 PF04239 Protein of unknown function (DUF421) B7L28_07265 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain B7L28_07265 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain B7L28_07270 PF00005 ABC transporter B7L28_07275 PF10369 Small subunit of acetolactate synthase B7L28_07275 PF01842 ACT domain B7L28_07280 PF00205 Thiamine pyrophosphate enzyme, central domain B7L28_07280 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain B7L28_07280 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain B7L28_07285 PF00291 Pyridoxal-phosphate dependent enzyme B7L28_07285 PF13291 ACT domain B7L28_07290 PF00920 Dehydratase family B7L28_07295 PF00939 Sodium:sulfate symporter transmembrane region B7L28_07310 PF02416 mttA/Hcf106 family B7L28_07315 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase B7L28_07320 PF00378 Enoyl-CoA hydratase/isomerase B7L28_07330 PF00572 Ribosomal protein L13 B7L28_07335 PF00163 Ribosomal protein S4/S9 N-terminal domain B7L28_07335 PF01479 S4 domain B7L28_07340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family B7L28_07340 PF03466 LysR substrate binding domain B7L28_07345 PF02694 Uncharacterised BCR, YnfA/UPF0060 family B7L28_07395 PF02277 Phosphoribosyltransferase B7L28_07400 PF02277 Phosphoribosyltransferase B7L28_07405 PF01842 ACT domain B7L28_07405 PF02153 Prephenate dehydrogenase B7L28_07410 PF01554 MatE B7L28_07425 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain B7L28_07430 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II B7L28_07430 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase B7L28_07430 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg B7L28_07435 PF01416 tRNA pseudouridine synthase B7L28_07440 PF02361 Cobalt transport protein B7L28_07445 PF00005 ABC transporter B7L28_07450 PF00005 ABC transporter B7L28_07455 PF01196 Ribosomal protein L17 B7L28_07460 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain B7L28_07460 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain B7L28_07460 PF01000 RNA polymerase Rpb3/RpoA insert domain B7L28_07465 PF00411 Ribosomal protein S11 B7L28_07475 PF00444 Ribosomal protein L36 B7L28_07480 PF01176 Translation initiation factor 1A / IF-1 B7L28_07485 PF00557 Metallopeptidase family M24 B7L28_07495 PF00344 SecY translocase B7L28_07500 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A B7L28_07505 PF00327 Ribosomal protein L30p/L7e B7L28_07510 PF00333 Ribosomal protein S5, N-terminal domain B7L28_07510 PF03719 Ribosomal protein S5, C-terminal domain B7L28_07515 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast B7L28_07520 PF00347 Ribosomal protein L6 B7L28_07525 PF00410 Ribosomal protein S8 B7L28_07530 PF00253 Ribosomal protein S14p/S29e B7L28_07535 PF00281 Ribosomal protein L5 B7L28_07535 PF00673 ribosomal L5P family C-terminus B7L28_07540 PF00467 KOW motif B7L28_07540 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 B7L28_07545 PF00238 Ribosomal protein L14p/L23e B7L28_07550 PF00366 Ribosomal protein S17 B7L28_07555 PF00831 Ribosomal L29 protein B7L28_07560 PF00252 Ribosomal protein L16p/L10e B7L28_07565 PF00189 Ribosomal protein S3, C-terminal domain B7L28_07565 PF07650 KH domain B7L28_07570 PF00237 Ribosomal protein L22p/L17e B7L28_07575 PF00203 Ribosomal protein S19 B7L28_07580 PF03947 Ribosomal Proteins L2, C-terminal domain B7L28_07580 PF00181 Ribosomal Proteins L2, RNA binding domain B7L28_07585 PF00276 Ribosomal protein L23 B7L28_07590 PF00573 Ribosomal protein L4/L1 family B7L28_07595 PF00297 Ribosomal protein L3 B7L28_07600 PF00338 Ribosomal protein S10p/S20e B7L28_07605 PF03144 Elongation factor Tu domain 2 B7L28_07605 PF03143 Elongation factor Tu C-terminal domain B7L28_07605 PF00009 Elongation factor Tu GTP binding domain B7L28_07610 PF03144 Elongation factor Tu domain 2 B7L28_07610 PF00009 Elongation factor Tu GTP binding domain B7L28_07610 PF03764 Elongation factor G, domain IV B7L28_07610 PF14492 Elongation Factor G, domain II B7L28_07610 PF00679 Elongation factor G C-terminus B7L28_07615 PF00177 Ribosomal protein S7p/S5e B7L28_07620 PF00164 Ribosomal protein S12/S23 B7L28_07630 PF04997 RNA polymerase Rpb1, domain 1 B7L28_07630 PF04998 RNA polymerase Rpb1, domain 5 B7L28_07630 PF05000 RNA polymerase Rpb1, domain 4 B7L28_07630 PF04983 RNA polymerase Rpb1, domain 3 B7L28_07630 PF00623 RNA polymerase Rpb1, domain 2 B7L28_07635 PF04560 RNA polymerase Rpb2, domain 7 B7L28_07635 PF04561 RNA polymerase Rpb2, domain 2 B7L28_07635 PF00562 RNA polymerase Rpb2, domain 6 B7L28_07635 PF10385 RNA polymerase beta subunit external 1 domain B7L28_07635 PF04565 RNA polymerase Rpb2, domain 3 B7L28_07635 PF04563 RNA polymerase beta subunit B7L28_07640 PF10415 Fumarase C C-terminus B7L28_07640 PF00206 Lyase B7L28_07645 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase B7L28_07650 PF00542 Ribosomal protein L7/L12 C-terminal domain B7L28_07650 PF16320 Ribosomal protein L7/L12 dimerisation domain B7L28_07655 PF00466 Ribosomal protein L10 B7L28_07660 PF00687 Ribosomal protein L1p/L10e family B7L28_07665 PF00298 Ribosomal protein L11, RNA binding domain B7L28_07665 PF03946 Ribosomal protein L11, N-terminal domain B7L28_07670 PF00467 KOW motif B7L28_07670 PF02357 Transcription termination factor nusG B7L28_07675 PF00584 SecE/Sec61-gamma subunits of protein translocation complex B7L28_07680 PF00471 Ribosomal protein L33 B7L28_07685 PF00115 Cytochrome C and Quinol oxidase polypeptide I B7L28_07695 PF03143 Elongation factor Tu C-terminal domain B7L28_07695 PF03144 Elongation factor Tu domain 2 B7L28_07695 PF00009 Elongation factor Tu GTP binding domain B7L28_07735 PF02492 CobW/HypB/UreG, nucleotide-binding domain B7L28_07740 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA B7L28_07745 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain B7L28_07745 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain B7L28_07750 PF03717 Penicillin-binding Protein dimerisation domain B7L28_07750 PF00905 Penicillin binding protein transpeptidase domain B7L28_07755 PF13735 tRNA nucleotidyltransferase domain 2 putative B7L28_07755 PF01743 Poly A polymerase head domain B7L28_07755 PF12627 Probable RNA and SrmB- binding site of polymerase A B7L28_07760 PF03313 Serine dehydratase alpha chain B7L28_07765 PF01842 ACT domain B7L28_07765 PF03315 Serine dehydratase beta chain B7L28_07770 PF03063 Prismane/CO dehydrogenase family B7L28_07785 PF04260 Protein of unknown function (DUF436) B7L28_07795 PF05681 Fumarate hydratase (Fumerase) B7L28_07820 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain B7L28_07820 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain B7L28_07825 PF02874 ATP synthase alpha/beta family, beta-barrel domain B7L28_07825 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain B7L28_07830 PF00231 ATP synthase B7L28_07835 PF02874 ATP synthase alpha/beta family, beta-barrel domain B7L28_07835 PF00306 ATP synthase alpha/beta chain, C terminal domain B7L28_07835 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain B7L28_07840 PF00213 ATP synthase delta (OSCP) subunit B7L28_07845 PF00430 ATP synthase B/B' CF(0) B7L28_07850 PF00137 ATP synthase subunit C B7L28_07855 PF00119 ATP synthase A chain B7L28_07870 PF02350 UDP-N-acetylglucosamine 2-epimerase B7L28_07875 PF00953 Glycosyl transferase family 4 B7L28_07880 PF05167 Uncharacterised ACR (DUF711) B7L28_07890 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III B7L28_07890 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I B7L28_07890 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain B7L28_07890 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II B7L28_07895 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 B7L28_07895 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) B7L28_07900 PF08544 GHMP kinases C terminal B7L28_07900 PF00288 GHMP kinases N terminal domain B7L28_07905 PF00392 Bacterial regulatory proteins, gntR family B7L28_07905 PF07729 FCD domain B7L28_07910 PF01235 Sodium:alanine symporter family B7L28_07915 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase B7L28_07915 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain B7L28_07925 PF06508 Queuosine biosynthesis protein QueC B7L28_07930 PF03372 Endonuclease/Exonuclease/phosphatase family B7L28_07945 PF00293 NUDIX domain B7L28_07955 PF01695 IstB-like ATP binding protein B7L28_07975 PF01797 Transposase IS200 like B7L28_07980 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle B7L28_07985 PF08352 Oligopeptide/dipeptide transporter, C-terminal region B7L28_07985 PF00005 ABC transporter B7L28_07990 PF08352 Oligopeptide/dipeptide transporter, C-terminal region B7L28_07990 PF00005 ABC transporter B7L28_07995 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle B7L28_08005 PF00528 Binding-protein-dependent transport system inner membrane component B7L28_08010 PF08352 Oligopeptide/dipeptide transporter, C-terminal region B7L28_08010 PF00005 ABC transporter B7L28_08015 PF00005 ABC transporter B7L28_08015 PF08352 Oligopeptide/dipeptide transporter, C-terminal region B7L28_08020 PF00528 Binding-protein-dependent transport system inner membrane component B7L28_08020 PF12911 N-terminal TM domain of oligopeptide transport permease C B7L28_08025 PF00528 Binding-protein-dependent transport system inner membrane component B7L28_08030 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle B7L28_08035 PF07715 TonB-dependent Receptor Plug Domain B7L28_08035 PF00593 TonB dependent receptor B7L28_08045 PF01032 FecCD transport family B7L28_08050 PF00005 ABC transporter B7L28_08055 PF01032 FecCD transport family B7L28_08060 PF00593 TonB dependent receptor B7L28_08060 PF07715 TonB-dependent Receptor Plug Domain B7L28_08080 PF13520 Amino acid permease B7L28_08085 PF14698 Argininosuccinate lyase C-terminal B7L28_08085 PF00206 Lyase B7L28_08090 PF00764 Arginosuccinate synthase B7L28_08095 PF00905 Penicillin binding protein transpeptidase domain B7L28_08095 PF00912 Transglycosylase B7L28_08100 PF02583 Metal-sensitive transcriptional repressor B7L28_08105 PF00381 PTS HPr component phosphorylation site B7L28_08110 PF00391 PEP-utilising enzyme, mobile domain B7L28_08110 PF05524 PEP-utilising enzyme, N-terminal B7L28_08110 PF02896 PEP-utilising enzyme, TIM barrel domain B7L28_08115 PF01678 Diaminopimelate epimerase B7L28_08120 PF03553 Na+/H+ antiporter family B7L28_08125 PF00294 pfkB family carbohydrate kinase B7L28_08130 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 B7L28_08130 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit B7L28_08135 PF01797 Transposase IS200 like B7L28_08155 PF00291 Pyridoxal-phosphate dependent enzyme B7L28_08160 PF02082 Transcriptional regulator B7L28_08165 PF00578 AhpC/TSA family B7L28_08175 PF06418 CTP synthase N-terminus B7L28_08175 PF00117 Glutamine amidotransferase class-I B7L28_08180 PF00750 tRNA synthetases class I (R) B7L28_08180 PF05746 DALR anticodon binding domain B7L28_08180 PF03485 Arginyl tRNA synthetase N terminal domain B7L28_08190 PF01541 GIY-YIG catalytic domain B7L28_08195 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD B7L28_08210 PF05525 Branched-chain amino acid transport protein B7L28_08215 PF00384 Molybdopterin oxidoreductase B7L28_08215 PF04879 Molybdopterin oxidoreductase Fe4S4 domain B7L28_08215 PF01568 Molydopterin dinucleotide binding domain B7L28_08220 PF02615 Malate/L-lactate dehydrogenase B7L28_08225 PF02652 L-lactate permease B7L28_08230 PF07690 Major Facilitator Superfamily B7L28_08240 PF02780 Transketolase, C-terminal domain B7L28_08240 PF02779 Transketolase, pyrimidine binding domain B7L28_08240 PF13292 1-deoxy-D-xylulose-5-phosphate synthase B7L28_08250 PF02277 Phosphoribosyltransferase B7L28_08255 PF00293 NUDIX domain B7L28_08275 PF00465 Iron-containing alcohol dehydrogenase B7L28_08290 PF00317 Ribonucleotide reductase, all-alpha domain B7L28_08290 PF02867 Ribonucleotide reductase, barrel domain B7L28_08290 PF03477 ATP cone domain B7L28_08295 PF00268 Ribonucleotide reductase, small chain B7L28_08305 PF13673 Acetyltransferase (GNAT) domain B7L28_08310 PF00793 DAHP synthetase I family B7L28_08310 PF18152 DAHP synthase ferredoxin-like domain B7L28_08315 PF01761 3-dehydroquinate synthase B7L28_08320 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) B7L28_08325 PF01264 Chorismate synthase B7L28_08330 PF01817 Chorismate mutase type II B7L28_08330 PF00800 Prephenate dehydratase B7L28_08335 PF01488 Shikimate / quinate 5-dehydrogenase B7L28_08335 PF08501 Shikimate dehydrogenase substrate binding domain B7L28_08350 PF01487 Type I 3-dehydroquinase B7L28_08355 PF07690 Major Facilitator Superfamily B7L28_08360 PF02082 Transcriptional regulator B7L28_08365 PF00860 Permease family B7L28_08385 PF00324 Amino acid permease B7L28_08400 PF00849 RNA pseudouridylate synthase B7L28_08400 PF01479 S4 domain B7L28_08405 PF13361 UvrD-like helicase C-terminal domain B7L28_08405 PF00580 UvrD/REP helicase N-terminal domain B7L28_08420 PF02575 YbaB/EbfC DNA-binding family B7L28_08425 PF12169 DNA polymerase III subunits gamma and tau domain III B7L28_08435 PF01493 GXGXG motif B7L28_08435 PF01645 Conserved region in glutamate synthase B7L28_08435 PF04898 Glutamate synthase central domain B7L28_08435 PF00310 Glutamine amidotransferases class-II B7L28_08455 PF01208 Uroporphyrinogen decarboxylase (URO-D) B7L28_08460 PF13514 AAA domain B7L28_08465 PF00149 Calcineurin-like phosphoesterase B7L28_08470 PF06968 Biotin and Thiamin Synthesis associated domain B7L28_08470 PF04055 Radical SAM superfamily B7L28_08475 PF01479 S4 domain B7L28_08475 PF00849 RNA pseudouridylate synthase B7L28_08495 PF00248 Aldo/keto reductase family B7L28_08500 PF05437 Branched-chain amino acid transport protein (AzlD) B7L28_08505 PF03591 AzlC protein B7L28_08510 PF00465 Iron-containing alcohol dehydrogenase B7L28_08515 PF03180 NLPA lipoprotein B7L28_08520 PF00881 Nitroreductase family B7L28_08520 PF01996 F420-0:Gamma-glutamyl ligase B7L28_08525 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain B7L28_08525 PF04324 BFD-like [2Fe-2S] binding domain B7L28_08525 PF01077 Nitrite and sulphite reductase 4Fe-4S domain B7L28_08525 PF07992 Pyridine nucleotide-disulphide oxidoreductase B7L28_08525 PF13806 Rieske-like [2Fe-2S] domain B7L28_08525 PF18267 Rubredoxin NAD+ reductase C-terminal domain B7L28_08530 PF00375 Sodium:dicarboxylate symporter family B7L28_08535 PF02589 LUD domain B7L28_08540 PF11870 Domain of unknown function (DUF3390) B7L28_08540 PF13183 4Fe-4S dicluster domain B7L28_08540 PF02589 LUD domain B7L28_08545 PF02754 Cysteine-rich domain B7L28_08570 PF03169 OPT oligopeptide transporter protein B7L28_08575 PF00206 Lyase B7L28_08575 PF10415 Fumarase C C-terminus B7L28_08580 PF00149 Calcineurin-like phosphoesterase B7L28_08585 PF00730 HhH-GPD superfamily base excision DNA repair protein B7L28_08585 PF14815 NUDIX domain B7L28_08585 PF00633 Helix-hairpin-helix motif B7L28_08590 PF00293 NUDIX domain B7L28_08620 PF00665 Integrase core domain B7L28_08635 PF02537 CrcB-like protein, Camphor Resistance (CrcB) B7L28_08645 PF00392 Bacterial regulatory proteins, gntR family B7L28_08645 PF07729 FCD domain B7L28_08650 PF00781 Diacylglycerol kinase catalytic domain B7L28_08655 PF00580 UvrD/REP helicase N-terminal domain B7L28_08655 PF12705 PD-(D/E)XK nuclease superfamily B7L28_08655 PF13361 UvrD-like helicase C-terminal domain B7L28_08660 PF13361 UvrD-like helicase C-terminal domain B7L28_08660 PF12705 PD-(D/E)XK nuclease superfamily B7L28_08695 PF00403 Heavy-metal-associated domain B7L28_08705 PF11799 impB/mucB/samB family C-terminal domain B7L28_08705 PF11798 IMS family HHH motif B7L28_08705 PF00817 impB/mucB/samB family B7L28_08710 PF03796 DnaB-like helicase C terminal domain B7L28_08710 PF00772 DnaB-like helicase N terminal domain B7L28_08720 PF02272 DHHA1 domain B7L28_08720 PF01368 DHH family B7L28_08730 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain B7L28_08730 PF00753 Metallo-beta-lactamase superfamily B7L28_08730 PF17770 Ribonuclease J C-terminal domain B7L28_08735 PF05656 Protein of unknown function (DUF805) B7L28_08745 PF00005 ABC transporter B7L28_08750 PF00528 Binding-protein-dependent transport system inner membrane component B7L28_08760 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase B7L28_08765 PF09335 SNARE associated Golgi protein B7L28_08775 PF02754 Cysteine-rich domain B7L28_08780 PF13085 2Fe-2S iron-sulfur cluster binding domain B7L28_08780 PF13183 4Fe-4S dicluster domain B7L28_08785 PF00890 FAD binding domain B7L28_08785 PF02910 Fumarate reductase flavoprotein C-term B7L28_08790 PF00072 Response regulator receiver domain B7L28_08790 PF00486 Transcriptional regulatory protein, C terminal B7L28_08795 PF00672 HAMP domain B7L28_08795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase B7L28_08795 PF00512 His Kinase A (phospho-acceptor) domain B7L28_08800 PF04286 Protein of unknown function (DUF445) B7L28_08805 PF04286 Protein of unknown function (DUF445) B7L28_08815 PF01638 HxlR-like helix-turn-helix B7L28_08820 PF13460 NAD(P)H-binding B7L28_08830 PF04405 Domain of Unknown function (DUF542) B7L28_08830 PF01814 Hemerythrin HHE cation binding domain B7L28_08835 PF01515 Phosphate acetyl/butaryl transferase B7L28_08840 PF13635 Domain of unknown function (DUF4143) B7L28_08840 PF13173 AAA domain B7L28_08855 PF07992 Pyridine nucleotide-disulphide oxidoreductase B7L28_08855 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster B7L28_08860 PF00155 Aminotransferase class I and II B7L28_08870 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain B7L28_08870 PF02777 Iron/manganese superoxide dismutases, C-terminal domain B7L28_08880 PF04608 Phosphatidylglycerophosphatase A B7L28_08885 PF03831 PhnA domain B7L28_08885 PF08274 PhnA Zinc-Ribbon B7L28_08890 PF13411 MerR HTH family regulatory protein B7L28_08975 PF00544 Pectate lyase B7L28_08990 PF01022 Bacterial regulatory protein, arsR family B7L28_08995 PF00709 Adenylosuccinate synthetase B7L28_09005 PF00206 Lyase B7L28_09005 PF10397 Adenylosuccinate lyase C-terminus B7L28_09020 PF02472 Biopolymer transport protein ExbD/TolR B7L28_09025 PF01618 MotA/TolQ/ExbB proton channel family B7L28_09040 PF02310 B12 binding domain B7L28_09040 PF01642 Methylmalonyl-CoA mutase B7L28_09045 PF01642 Methylmalonyl-CoA mutase B7L28_09045 PF02310 B12 binding domain B7L28_09075 PF02913 FAD linked oxidases, C-terminal domain B7L28_09075 PF01565 FAD binding domain B7L28_09085 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ B7L28_09095 PF09861 Lactate racemase N-terminal domain B7L28_09100 PF00654 Voltage gated chloride channel B7L28_09105 PF00465 Iron-containing alcohol dehydrogenase B7L28_09110 PF00933 Glycosyl hydrolase family 3 N terminal domain B7L28_09110 PF01915 Glycosyl hydrolase family 3 C-terminal domain B7L28_09120 PF02163 Peptidase family M50 B7L28_09135 PF01047 MarR family B7L28_09165 PF03960 ArsC family B7L28_09170 PF01381 Helix-turn-helix B7L28_09225 PF01797 Transposase IS200 like B7L28_09240 PF05656 Protein of unknown function (DUF805) B7L28_09255 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region B7L28_09255 PF00037 4Fe-4S binding domain B7L28_09255 PF02256 Iron hydrogenase small subunit B7L28_09255 PF02906 Iron only hydrogenase large subunit, C-terminal domain B7L28_09275 PF03989 DNA gyrase C-terminal domain, beta-propeller B7L28_09275 PF00521 DNA gyrase/topoisomerase IV, subunit A B7L28_09280 PF07690 Major Facilitator Superfamily B7L28_09295 PF17746 SfsA N-terminal OB domain B7L28_09295 PF03749 Sugar fermentation stimulation protein RE domain B7L28_09310 PF04324 BFD-like [2Fe-2S] binding domain B7L28_09310 PF01077 Nitrite and sulphite reductase 4Fe-4S domain B7L28_09310 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain B7L28_09310 PF07992 Pyridine nucleotide-disulphide oxidoreductase B7L28_09310 PF18267 Rubredoxin NAD+ reductase C-terminal domain B7L28_09350 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP B7L28_09360 PF01551 Peptidase family M23 B7L28_09360 PF01464 Transglycosylase SLT domain B7L28_09360 PF10145 Phage-related minor tail protein B7L28_09370 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal B7L28_09370 PF01926 50S ribosome-binding GTPase B7L28_09375 PF17762 HTH domain found in ParB protein B7L28_09375 PF02195 ParB-like nuclease domain B7L28_09380 PF13614 AAA domain B7L28_09390 PF00809 Pterin binding enzyme B7L28_09390 PF02965 Vitamin B12 dependent methionine synthase, activation domain B7L28_09390 PF02574 Homocysteine S-methyltransferase B7L28_09390 PF02310 B12 binding domain B7L28_09390 PF02607 B12 binding domain B7L28_09395 PF02574 Homocysteine S-methyltransferase B7L28_09395 PF02219 Methylenetetrahydrofolate reductase B7L28_09400 PF02527 rRNA small subunit methyltransferase G B7L28_09405 PF13932 GidA associated domain B7L28_09405 PF01134 Glucose inhibited division protein A B7L28_09415 PF01424 R3H domain B7L28_09415 PF14804 Jag N-terminus B7L28_09420 PF14849 YidC periplasmic domain B7L28_09420 PF02096 60Kd inner membrane protein B7L28_09425 PF01809 Putative membrane protein insertion efficiency factor B7L28_09430 PF00825 Ribonuclease P B7L28_09435 PF00468 Ribosomal protein L34