locus-tag class description GJQ55_00005 IPR003593 AAA+ ATPase domain GJQ55_00005 IPR001957 Chromosomal replication control, initiator DnaA GJQ55_00005 IPR020591 Chromosomal replication control, initiator DnaA-like GJQ55_00005 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GJQ55_00005 IPR013317 Chromosomal replication initiator protein DnaA GJQ55_00005 IPR013159 Chromosomal replication initiator, DnaA C-terminal GJQ55_00005 IPR024633 DnaA N-terminal domain GJQ55_00005 IPR038454 DnaA, N-terminal domain superfamily GJQ55_00005 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_00005 IPR010921 Trp repressor/replication initiator GJQ55_00010 IPR001001 DNA polymerase III, beta sliding clamp GJQ55_00010 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GJQ55_00010 IPR022637 DNA polymerase III, beta sliding clamp, central GJQ55_00010 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GJQ55_00015 IPR042174 DNA-binding RecF, domain 2 GJQ55_00015 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_00015 IPR003395 RecF/RecN/SMC, N-terminal GJQ55_00015 IPR001238 DNA-binding, RecF GJQ55_00015 IPR018078 DNA-binding, RecF, conserved site GJQ55_00020 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup GJQ55_00020 IPR002288 DNA gyrase B subunit, C-terminal GJQ55_00020 IPR011557 DNA gyrase, subunit B GJQ55_00020 IPR041423 DNA gyrase subunit B insert domain GJQ55_00020 IPR003594 Histidine kinase/HSP90-like ATPase GJQ55_00020 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GJQ55_00020 IPR020568 Ribosomal protein S5 domain 2-type fold GJQ55_00020 IPR001241 DNA topoisomerase, type IIA GJQ55_00020 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GJQ55_00020 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GJQ55_00020 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GJQ55_00020 IPR018522 DNA topoisomerase, type IIA, conserved site GJQ55_00020 IPR006171 TOPRIM domain GJQ55_00020 IPR034160 DNA gyrase subunit B, TOPRIM domain GJQ55_00035 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GJQ55_00035 IPR023214 HAD superfamily GJQ55_00035 IPR006543 Histidinol-phosphate phosphatase GJQ55_00035 IPR036412 HAD-like superfamily GJQ55_00035 IPR006549 HAD-superfamily hydrolase,subfamily IIIA GJQ55_00040 IPR008909 DALR anticodon binding GJQ55_00040 IPR015944 Glycine-tRNA ligase, beta subunit GJQ55_00040 IPR006194 Glycine-tRNA synthetase, heterodimeric GJQ55_00045 IPR006194 Glycine-tRNA synthetase, heterodimeric GJQ55_00045 IPR002310 Glycine-tRNA ligase, alpha subunit GJQ55_00050 IPR000060 BCCT transporter family GJQ55_00050 IPR018093 BCCT transporter, conserved site GJQ55_00060 IPR011006 CheY-like superfamily GJQ55_00060 IPR001789 Signal transduction response regulator, receiver domain GJQ55_00065 IPR004960 Bacterial lipid A biosynthesis acyltransferase GJQ55_00065 IPR011921 Lipid A biosynthesis myristoyltransferase GJQ55_00070 IPR023729 K(+)/H(+) antiporter NhaP2 GJQ55_00070 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GJQ55_00070 IPR005170 Transporter-associated domain GJQ55_00070 IPR030151 K(+)/H(+) antiporter NhaP GJQ55_00070 IPR006037 Regulator of K+ conductance, C-terminal GJQ55_00070 IPR016169 FAD-binding, type PCMH, subdomain 2 GJQ55_00070 IPR036318 FAD-binding, type PCMH-like superfamily GJQ55_00070 IPR006153 Cation/H+ exchanger GJQ55_00070 IPR038770 Sodium/solute symporter superfamily GJQ55_00075 IPR006015 Universal stress protein A family GJQ55_00075 IPR006016 UspA GJQ55_00080 IPR002645 STAS domain GJQ55_00080 IPR001902 SLC26A/SulP transporter GJQ55_00080 IPR036513 STAS domain superfamily GJQ55_00080 IPR018045 Sulphate anion transporter, conserved site GJQ55_00080 IPR011547 SLC26A/SulP transporter domain GJQ55_00085 IPR003445 Cation transporter GJQ55_00085 IPR004772 TrkH potassium transport family GJQ55_00090 IPR006036 Potassium uptake protein TrkA GJQ55_00090 IPR036291 NAD(P)-binding domain superfamily GJQ55_00090 IPR006037 Regulator of K+ conductance, C-terminal GJQ55_00090 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GJQ55_00090 IPR003148 Regulator of K+ conductance, N-terminal GJQ55_00095 IPR004573 rRNA small subunit methyltransferase B GJQ55_00095 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase GJQ55_00095 IPR023267 RNA (C5-cytosine) methyltransferase GJQ55_00095 IPR006027 NusB/RsmB/TIM44 GJQ55_00095 IPR035926 NusB-like superfamily GJQ55_00095 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GJQ55_00095 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GJQ55_00100 IPR041711 Methionyl-tRNA formyltransferase, N-terminal domain GJQ55_00100 IPR001555 Phosphoribosylglycinamide formyltransferase, active site GJQ55_00100 IPR036477 Formyl transferase, N-terminal domain superfamily GJQ55_00100 IPR011034 Formyl transferase-like, C-terminal domain superfamily GJQ55_00100 IPR037022 Formyl transferase, C-terminal domain superfamily GJQ55_00100 IPR005793 Formyl transferase, C-terminal GJQ55_00100 IPR005794 Methionyl-tRNA formyltransferase GJQ55_00100 IPR002376 Formyl transferase, N-terminal GJQ55_00105 IPR023635 Peptide deformylase GJQ55_00105 IPR036821 Peptide deformylase superfamily GJQ55_00115 IPR036388 Winged helix-like DNA-binding domain superfamily GJQ55_00115 IPR003488 DNA recombination-mediator protein A GJQ55_00115 IPR041614 DprA, winged helix domain GJQ55_00120 IPR023535 Threonylcarbamoyl-AMP synthase GJQ55_00120 IPR006070 YrdC-like domain GJQ55_00120 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily GJQ55_00125 IPR001260 Coproporphyrinogen III oxidase, aerobic GJQ55_00125 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GJQ55_00125 IPR018375 Coproporphyrinogen III oxidase, conserved site GJQ55_00130 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase GJQ55_00130 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GJQ55_00130 IPR022893 Shikimate dehydrogenase family GJQ55_00130 IPR041121 SDH, C-terminal GJQ55_00130 IPR036291 NAD(P)-binding domain superfamily GJQ55_00130 IPR011342 Shikimate dehydrogenase GJQ55_00155 IPR017856 Integrase-like, N-terminal GJQ55_00155 IPR002876 Transcriptional regulator TACO1-like GJQ55_00155 IPR026564 Transcriptional regulator TACO1-like, domain 3 GJQ55_00155 IPR029072 YebC-like GJQ55_00170 IPR038296 Antitoxin ParD superfamily GJQ55_00170 IPR022789 Antitoxin ParD GJQ55_00170 IPR010985 Ribbon-helix-helix GJQ55_00180 IPR011004 Trimeric LpxA-like superfamily GJQ55_00180 IPR001451 Hexapeptide repeat GJQ55_00185 IPR001567 Peptidase M3A/M3B catalytic domain GJQ55_00185 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 GJQ55_00210 IPR036188 FAD/NAD(P)-binding domain superfamily GJQ55_00210 IPR006231 Malate:quinone-oxidoreductase GJQ55_00215 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GJQ55_00215 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 GJQ55_00215 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal GJQ55_00215 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain GJQ55_00215 IPR036291 NAD(P)-binding domain superfamily GJQ55_00220 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal GJQ55_00225 IPR029035 DHS-like NAD/FAD-binding domain superfamily GJQ55_00225 IPR012136 NADP transhydrogenase, beta subunit GJQ55_00225 IPR034300 NADP transhydrogenase beta-like domain GJQ55_00230 IPR023480 Uncharacterised protein family UPF0312/YceI GJQ55_00230 IPR007372 Lipid/polyisoprenoid-binding, YceI-like GJQ55_00230 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily GJQ55_00235 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GJQ55_00235 IPR016174 Di-haem cytochrome, transmembrane GJQ55_00240 IPR005119 LysR, substrate-binding GJQ55_00240 IPR000847 Transcription regulator HTH, LysR GJQ55_00240 IPR036388 Winged helix-like DNA-binding domain superfamily GJQ55_00240 IPR036390 Winged helix DNA-binding domain superfamily GJQ55_00245 IPR003782 Copper chaperone SCO1/SenC GJQ55_00245 IPR036249 Thioredoxin-like superfamily GJQ55_00250 IPR023828 Peptidase S8, subtilisin, Ser-active site GJQ55_00250 IPR022398 Peptidase S8, subtilisin, His-active site GJQ55_00250 IPR023827 Peptidase S8, subtilisin, Asp-active site GJQ55_00250 IPR036852 Peptidase S8/S53 domain superfamily GJQ55_00250 IPR000209 Peptidase S8/S53 domain GJQ55_00250 IPR007280 Peptidase, C-terminal, archaeal/bacterial GJQ55_00250 IPR034176 Peptidase MprA-like catalytic domain GJQ55_00250 IPR015500 Peptidase S8, subtilisin-related GJQ55_00255 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 GJQ55_00255 IPR004482 Mg chelatase-related protein GJQ55_00255 IPR025158 Mg chelatase-related protein, C-terminal domain GJQ55_00255 IPR000523 Magnesium chelatase ChlI domain GJQ55_00255 IPR020568 Ribosomal protein S5 domain 2-type fold GJQ55_00255 IPR003593 AAA+ ATPase domain GJQ55_00255 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_00265 IPR034739 UvrD/AddA helicase, N-terminal GJQ55_00265 IPR014016 UvrD-like helicase, ATP-binding domain GJQ55_00265 IPR005752 ATP-dependent DNA helicase Rep GJQ55_00265 IPR000212 DNA helicase, UvrD/REP type GJQ55_00265 IPR014017 UvrD-like DNA helicase, C-terminal GJQ55_00265 IPR013986 DExx box DNA helicase domain superfamily GJQ55_00265 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_00275 IPR001633 EAL domain GJQ55_00275 IPR029787 Nucleotide cyclase GJQ55_00275 IPR005330 MHYT domain GJQ55_00275 IPR000160 GGDEF domain GJQ55_00275 IPR035919 EAL domain superfamily GJQ55_00285 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GJQ55_00285 IPR036641 HPT domain superfamily GJQ55_00285 IPR019247 Histidine kinase BarA, N-terminal GJQ55_00285 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GJQ55_00285 IPR011006 CheY-like superfamily GJQ55_00285 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GJQ55_00285 IPR003660 HAMP domain GJQ55_00285 IPR003594 Histidine kinase/HSP90-like ATPase GJQ55_00285 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GJQ55_00285 IPR005467 Histidine kinase domain GJQ55_00285 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GJQ55_00285 IPR001789 Signal transduction response regulator, receiver domain GJQ55_00290 IPR003607 HD/PDEase domain GJQ55_00290 IPR037522 HD-GYP domain GJQ55_00290 IPR001789 Signal transduction response regulator, receiver domain GJQ55_00290 IPR011006 CheY-like superfamily GJQ55_00320 IPR017932 Glutamine amidotransferase type 2 domain GJQ55_00320 IPR029055 Nucleophile aminohydrolases, N-terminal GJQ55_00320 IPR035466 GlmS/AgaS, SIS domain 1 GJQ55_00320 IPR035490 GlmS/FrlB, SIS domain 2 GJQ55_00320 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GJQ55_00320 IPR001347 Sugar isomerase (SIS) GJQ55_00325 IPR014036 DeoR C-terminal sensor domain GJQ55_00325 IPR001034 DeoR-type HTH domain GJQ55_00325 IPR037171 NagB/RpiA transferase-like GJQ55_00325 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GJQ55_00325 IPR036388 Winged helix-like DNA-binding domain superfamily GJQ55_00325 IPR036390 Winged helix DNA-binding domain superfamily GJQ55_00330 IPR000160 GGDEF domain GJQ55_00330 IPR029787 Nucleotide cyclase GJQ55_00340 IPR013766 Thioredoxin domain GJQ55_00340 IPR017937 Thioredoxin, conserved site GJQ55_00340 IPR036249 Thioredoxin-like superfamily GJQ55_00340 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL GJQ55_00340 IPR012336 Thioredoxin-like fold GJQ55_00345 IPR009056 Cytochrome c-like domain GJQ55_00345 IPR036909 Cytochrome c-like domain superfamily GJQ55_00345 IPR024167 Cytochrome c4-like GJQ55_00350 IPR002323 Cytochrome c, class IE GJQ55_00350 IPR036909 Cytochrome c-like domain superfamily GJQ55_00350 IPR009056 Cytochrome c-like domain GJQ55_00355 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_00355 IPR006073 GTP binding domain GJQ55_00355 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GJQ55_00355 IPR030393 EngB-type guanine nucleotide-binding (G) domain GJQ55_00360 IPR001626 ABC transporter, TroCD-like GJQ55_00360 IPR037294 ABC transporter, BtuC-like GJQ55_00365 IPR017882 Zinc import ATP-binding protein ZnuC GJQ55_00365 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_00365 IPR003439 ABC transporter-like GJQ55_00365 IPR003593 AAA+ ATPase domain GJQ55_00370 IPR036388 Winged helix-like DNA-binding domain superfamily GJQ55_00370 IPR036390 Winged helix DNA-binding domain superfamily GJQ55_00370 IPR002481 Ferric-uptake regulator GJQ55_00375 IPR035520 High-affinity zinc uptake system protein ZnuA GJQ55_00375 IPR006127 Periplasmic solute binding protein, ZnuA-like GJQ55_00380 IPR011004 Trimeric LpxA-like superfamily GJQ55_00380 IPR025877 MobA-like NTP transferase GJQ55_00380 IPR029044 Nucleotide-diphospho-sugar transferases GJQ55_00380 IPR001451 Hexapeptide repeat GJQ55_00380 IPR038009 GlmU, C-terminal LbH domain GJQ55_00380 IPR018357 Hexapeptide transferase, conserved site GJQ55_00380 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GJQ55_00385 IPR005261 Conserved hypothetical protein CHP00659 GJQ55_00385 IPR007300 CidB/LrgB family GJQ55_00390 IPR005538 LrgA/CidA family GJQ55_00400 IPR002549 Transmembrane protein TqsA-like GJQ55_00405 IPR036388 Winged helix-like DNA-binding domain superfamily GJQ55_00405 IPR001867 OmpR/PhoB-type DNA-binding domain GJQ55_00405 IPR001789 Signal transduction response regulator, receiver domain GJQ55_00405 IPR011006 CheY-like superfamily GJQ55_00405 IPR039420 Transcriptional regulatory protein WalR-like GJQ55_00410 IPR003660 HAMP domain GJQ55_00410 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GJQ55_00410 IPR005467 Histidine kinase domain GJQ55_00410 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GJQ55_00410 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GJQ55_00410 IPR031930 2-component histidine kinase, sensor domain GJQ55_00410 IPR038428 2-component histidine kinase, sensor domain superfamily GJQ55_00410 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GJQ55_00410 IPR003594 Histidine kinase/HSP90-like ATPase GJQ55_00415 IPR036291 NAD(P)-binding domain superfamily GJQ55_00415 IPR001891 Malic oxidoreductase GJQ55_00415 IPR012302 Malic enzyme, NAD-binding GJQ55_00415 IPR015884 Malic enzyme, conserved site GJQ55_00415 IPR037062 Malic enzyme, N-terminal domain superfamily GJQ55_00415 IPR012301 Malic enzyme, N-terminal domain GJQ55_00425 IPR005225 Small GTP-binding protein domain GJQ55_00425 IPR009000 Translation protein, beta-barrel domain superfamily GJQ55_00425 IPR042116 GTP-binding protein TypA/BipA, C-terminal GJQ55_00425 IPR006298 GTP-binding protein TypA GJQ55_00425 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_00425 IPR031157 Tr-type G domain, conserved site GJQ55_00425 IPR004161 Translation elongation factor EFTu-like, domain 2 GJQ55_00425 IPR000640 Elongation factor EFG, domain V-like GJQ55_00425 IPR035647 EF-G domain III/V-like GJQ55_00425 IPR035651 BipA, domain V GJQ55_00425 IPR000795 Transcription factor, GTP-binding domain GJQ55_00430 IPR008147 Glutamine synthetase, beta-Grasp domain GJQ55_00430 IPR027302 Glutamine synthetase, N-terminal conserved site GJQ55_00430 IPR001637 Glutamine synthetase class-I, adenylation site GJQ55_00430 IPR004809 Glutamine synthetase type I GJQ55_00430 IPR036651 Glutamine synthetase, N-terminal domain superfamily GJQ55_00430 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GJQ55_00430 IPR008146 Glutamine synthetase, catalytic domain GJQ55_00430 IPR027303 Glutamine synthetase, glycine-rich site GJQ55_00445 IPR037171 NagB/RpiA transferase-like GJQ55_00445 IPR002698 5-formyltetrahydrofolate cyclo-ligase GJQ55_00445 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily GJQ55_00455 IPR036192 Cell division protein ZapA-like superfamily GJQ55_00455 IPR007838 Cell division protein ZapA-like GJQ55_00470 IPR001714 Peptidase M24, methionine aminopeptidase GJQ55_00470 IPR000994 Peptidase M24 GJQ55_00470 IPR036005 Creatinase/aminopeptidase-like GJQ55_00470 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal GJQ55_00470 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site GJQ55_00470 IPR007865 Aminopeptidase P, N-terminal GJQ55_00475 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GJQ55_00475 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GJQ55_00475 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase GJQ55_00475 IPR036188 FAD/NAD(P)-binding domain superfamily GJQ55_00475 IPR002938 FAD-binding domain GJQ55_00480 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GJQ55_00480 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GJQ55_00480 IPR036188 FAD/NAD(P)-binding domain superfamily GJQ55_00480 IPR002938 FAD-binding domain GJQ55_00485 IPR029069 HotDog domain superfamily GJQ55_00485 IPR033120 Hotdog acyl-CoA thioesterase (ACOT)-type domain GJQ55_00485 IPR006683 Thioesterase domain GJQ55_00485 IPR040170 Cytosolic acyl coenzyme A thioester hydrolase GJQ55_00490 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit GJQ55_00490 IPR004681 TRAP transporter large membrane protein DctM GJQ55_00505 IPR011864 Phosphate ABC transporter, permease protein PstC GJQ55_00505 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GJQ55_00505 IPR035906 MetI-like superfamily GJQ55_00510 IPR005672 Phosphate transport system permease protein PstA GJQ55_00510 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GJQ55_00510 IPR035906 MetI-like superfamily GJQ55_00515 IPR005670 Phosphate transport system permease protein 1 GJQ55_00515 IPR003593 AAA+ ATPase domain GJQ55_00515 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_00515 IPR015850 ABC transporter, phosphate import, PstB GJQ55_00515 IPR017871 ABC transporter, conserved site GJQ55_00515 IPR003439 ABC transporter-like GJQ55_00520 IPR026022 PhoU domain GJQ55_00520 IPR038078 PhoU-like domain superfamily GJQ55_00520 IPR028366 Phosphate transport system protein PhoU GJQ55_00525 IPR002299 Porin, Neisseria sp. type GJQ55_00525 IPR023614 Porin domain superfamily GJQ55_00525 IPR033900 Porin domain, Gram-negative type GJQ55_00525 IPR013793 Porin, Gram-negative type, conserved site GJQ55_00525 IPR001702 Porin, Gram-negative type GJQ55_00530 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GJQ55_00530 IPR005467 Histidine kinase domain GJQ55_00530 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GJQ55_00530 IPR000014 PAS domain GJQ55_00530 IPR035965 PAS domain superfamily GJQ55_00530 IPR013767 PAS fold GJQ55_00530 IPR021766 Phosphate regulon sensor protein PhoR GJQ55_00530 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GJQ55_00530 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GJQ55_00530 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GJQ55_00530 IPR003594 Histidine kinase/HSP90-like ATPase GJQ55_00535 IPR011006 CheY-like superfamily GJQ55_00535 IPR001867 OmpR/PhoB-type DNA-binding domain GJQ55_00535 IPR016032 Signal transduction response regulator, C-terminal effector GJQ55_00535 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GJQ55_00535 IPR001789 Signal transduction response regulator, receiver domain GJQ55_00535 IPR039420 Transcriptional regulatory protein WalR-like GJQ55_00535 IPR036388 Winged helix-like DNA-binding domain superfamily GJQ55_00555 IPR001537 tRNA/rRNA methyltransferase, SpoU type GJQ55_00555 IPR029028 Alpha/beta knot methyltransferases GJQ55_00555 IPR022724 RNA methyltransferase, SpoU/TrmH type, C-terminal GJQ55_00555 IPR033671 tRNA (guanosine(18)-2'-O)-methyltransferase GJQ55_00555 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal GJQ55_00560 IPR022985 Sulfate transporter CysZ GJQ55_00565 IPR011006 CheY-like superfamily GJQ55_00565 IPR001789 Signal transduction response regulator, receiver domain GJQ55_00570 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GJQ55_00570 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GJQ55_00570 IPR005467 Histidine kinase domain GJQ55_00570 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GJQ55_00570 IPR003594 Histidine kinase/HSP90-like ATPase GJQ55_00570 IPR035965 PAS domain superfamily GJQ55_00570 IPR013767 PAS fold GJQ55_00570 IPR021766 Phosphate regulon sensor protein PhoR GJQ55_00570 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GJQ55_00570 IPR000014 PAS domain GJQ55_00570 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GJQ55_00575 IPR011006 CheY-like superfamily GJQ55_00575 IPR016032 Signal transduction response regulator, C-terminal effector GJQ55_00575 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GJQ55_00575 IPR001789 Signal transduction response regulator, receiver domain GJQ55_00575 IPR001867 OmpR/PhoB-type DNA-binding domain GJQ55_00575 IPR036388 Winged helix-like DNA-binding domain superfamily GJQ55_00575 IPR039420 Transcriptional regulatory protein WalR-like GJQ55_00580 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GJQ55_00580 IPR039653 Prenyltransferase GJQ55_00580 IPR000537 UbiA prenyltransferase family GJQ55_00585 IPR007440 Chorismate--pyruvate lyase GJQ55_00585 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily GJQ55_00590 IPR024934 Rubredoxin-like domain GJQ55_00590 IPR024935 Rubredoxin domain GJQ55_00590 IPR024922 Rubredoxin GJQ55_00590 IPR018527 Rubredoxin, iron-binding site GJQ55_00595 IPR023753 FAD/NAD(P)-binding domain GJQ55_00595 IPR036188 FAD/NAD(P)-binding domain superfamily GJQ55_00595 IPR041364 Rubredoxin binding domain GJQ55_00600 IPR000119 Histone-like DNA-binding protein GJQ55_00600 IPR020816 Histone-like DNA-binding protein, conserved site GJQ55_00600 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GJQ55_00615 IPR034703 Proton/glutamate-aspartate symporter GltP GJQ55_00615 IPR033380 Glutamate-aspartate symport protein GltP/GltT GJQ55_00615 IPR001991 Sodium:dicarboxylate symporter GJQ55_00615 IPR036458 Sodium:dicarboxylate symporter superfamily GJQ55_00615 IPR018107 Sodium:dicarboxylate symporter, conserved site GJQ55_00625 IPR036269 Rho termination factor, N-terminal domain superfamily GJQ55_00625 IPR041703 Transcription termination factor Rho, ATP binding domain GJQ55_00625 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_00625 IPR012340 Nucleic acid-binding, OB-fold GJQ55_00625 IPR011129 Cold shock domain GJQ55_00625 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GJQ55_00625 IPR011112 Rho termination factor, N-terminal GJQ55_00625 IPR003593 AAA+ ATPase domain GJQ55_00625 IPR011113 Rho termination factor, RNA-binding domain GJQ55_00625 IPR004665 Transcription termination factor Rho GJQ55_00630 IPR005746 Thioredoxin GJQ55_00630 IPR013766 Thioredoxin domain GJQ55_00630 IPR036249 Thioredoxin-like superfamily GJQ55_00630 IPR017937 Thioredoxin, conserved site GJQ55_00635 IPR030673 Pyrophosphatase, GppA/Ppx-type GJQ55_00635 IPR003695 Ppx/GppA phosphatase GJQ55_00635 IPR022371 Exopolyphosphatase GJQ55_00640 IPR008972 Cupredoxin GJQ55_00640 IPR011706 Multicopper oxidase, type 2 GJQ55_00640 IPR001117 Multicopper oxidase, type 1 GJQ55_00640 IPR006376 Copper-resistance protein CopA GJQ55_00640 IPR033138 Multicopper oxidases, conserved site GJQ55_00640 IPR011707 Multicopper oxidase, type 3 GJQ55_00640 IPR002355 Multicopper oxidase, copper-binding site GJQ55_00640 IPR034284 Copper resistance protein, first cupredoxin domain GJQ55_00640 IPR034282 Copper resistance protein CopA, second cupredoxin domain GJQ55_00640 IPR034279 Copper resistance protein, third cupredoxin domain GJQ55_00640 IPR006311 Twin-arginine translocation pathway, signal sequence GJQ55_00640 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal GJQ55_00650 IPR036832 Polyphosphate kinase N-terminal domain superfamily GJQ55_00650 IPR003414 Polyphosphate kinase GJQ55_00650 IPR041108 Polyphosphate kinase, C-terminal domain 1 GJQ55_00650 IPR024953 Polyphosphate kinase middle domain GJQ55_00650 IPR025198 Polyphosphate kinase N-terminal domain GJQ55_00650 IPR036830 Polyphosphate kinase middle domain superfamily GJQ55_00650 IPR025200 Polyphosphate kinase C-terminal domain 2 GJQ55_00655 IPR013785 Aldolase-type TIM barrel GJQ55_00655 IPR030656 Delta-aminolevulinic acid dehydratase, active site GJQ55_00655 IPR001731 Delta-aminolevulinic acid dehydratase GJQ55_00660 IPR006683 Thioesterase domain GJQ55_00660 IPR003736 Phenylacetic acid degradation-related domain GJQ55_00660 IPR029069 HotDog domain superfamily GJQ55_00670 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GJQ55_00670 IPR037171 NagB/RpiA transferase-like GJQ55_00670 IPR004788 Ribose 5-phosphate isomerase, type A GJQ55_00675 IPR001721 Threonine dehydratase, ACT-like domain GJQ55_00675 IPR001926 Pyridoxal-phosphate dependent enzyme GJQ55_00675 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GJQ55_00675 IPR038110 Threonine dehydratase, ACT-like domain superfamily GJQ55_00675 IPR005787 Threonine dehydratase, biosynthetic GJQ55_00675 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme GJQ55_00680 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GJQ55_00680 IPR002123 Phospholipid/glycerol acyltransferase GJQ55_00685 IPR002625 Smr domain GJQ55_00685 IPR036063 Smr domain superfamily GJQ55_00700 IPR025110 AMP-binding enzyme, C-terminal domain GJQ55_00700 IPR020845 AMP-binding, conserved site GJQ55_00700 IPR000873 AMP-dependent synthetase/ligase GJQ55_00700 IPR042099 AMP-dependent synthetase-like superfamily GJQ55_00710 IPR029058 Alpha/Beta hydrolase fold GJQ55_00710 IPR000073 Alpha/beta hydrolase fold-1 GJQ55_00710 IPR008220 Homoserine/serine acetyltransferase MetX-like GJQ55_00715 IPR010743 Methionine biosynthesis MetW GJQ55_00715 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase GJQ55_00715 IPR000073 Alpha/beta hydrolase fold-1 GJQ55_00715 IPR008220 Homoserine/serine acetyltransferase MetX-like GJQ55_00715 IPR029058 Alpha/Beta hydrolase fold GJQ55_00725 IPR020922 dITP/XTP pyrophosphatase GJQ55_00725 IPR002637 Ham1-like protein GJQ55_00725 IPR029001 Inosine triphosphate pyrophosphatase-like GJQ55_00730 IPR023404 Radical SAM, alpha/beta horseshoe GJQ55_00730 IPR007197 Radical SAM GJQ55_00730 IPR004559 Heme chaperone HemW-like GJQ55_00730 IPR010723 HemN, C-terminal GJQ55_00730 IPR006638 Elp3/MiaB/NifB GJQ55_00730 IPR034505 Anaerobic coproporphyrinogen-III oxidase GJQ55_00735 IPR022826 3-deoxy-D-manno-octulosonic acid kinase GJQ55_00735 IPR011009 Protein kinase-like domain superfamily GJQ55_00740 IPR002201 Glycosyl transferase, family 9 GJQ55_00750 IPR036393 Acetylglutamate kinase-like superfamily GJQ55_00750 IPR001048 Aspartate/glutamate/uridylate kinase GJQ55_00750 IPR027795 CASTOR, ACT domain GJQ55_00755 IPR010462 Ectoine synthase GJQ55_00755 IPR014710 RmlC-like jelly roll fold GJQ55_00755 IPR011051 RmlC-like cupin domain superfamily GJQ55_00760 IPR015424 Pyridoxal phosphate-dependent transferase GJQ55_00760 IPR005814 Aminotransferase class-III GJQ55_00760 IPR012773 Ectoine biosynthetic protein GJQ55_00760 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GJQ55_00760 IPR004637 2,4-diaminobutyrate 4-transaminase GJQ55_00760 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GJQ55_00765 IPR000182 GNAT domain GJQ55_00765 IPR012772 L-2,4-diaminobutyric acid acetyltransferase GJQ55_00765 IPR016181 Acyl-CoA N-acyltransferase GJQ55_00775 IPR020610 Thiolase, active site GJQ55_00775 IPR016039 Thiolase-like GJQ55_00775 IPR002155 Thiolase GJQ55_00775 IPR020615 Thiolase, acyl-enzyme intermediate active site GJQ55_00775 IPR020617 Thiolase, C-terminal GJQ55_00775 IPR020616 Thiolase, N-terminal GJQ55_00775 IPR020613 Thiolase, conserved site GJQ55_00785 IPR019820 Sec-independent periplasmic protein translocase, conserved site GJQ55_00785 IPR002033 Sec-independent periplasmic protein translocase TatC GJQ55_00790 IPR003369 Sec-independent protein translocase protein TatA/B/E GJQ55_00790 IPR018448 Twin-arginine translocation protein TatB GJQ55_00795 IPR003369 Sec-independent protein translocase protein TatA/B/E GJQ55_00795 IPR006312 Sec-independent protein translocase protein TatA/E GJQ55_00800 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GJQ55_00800 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like GJQ55_00805 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily GJQ55_00805 IPR026660 Phosphoribosyl-AMP cyclohydrolase GJQ55_00805 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GJQ55_00810 IPR011009 Protein kinase-like domain superfamily GJQ55_00810 IPR010232 Probable protein kinase UbiB GJQ55_00810 IPR004147 UbiB domain GJQ55_00820 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase GJQ55_00820 IPR004033 UbiE/COQ5 methyltransferase GJQ55_00820 IPR023576 UbiE/COQ5 methyltransferase, conserved site GJQ55_00835 IPR029058 Alpha/Beta hydrolase fold GJQ55_00835 IPR002925 Dienelactone hydrolase GJQ55_00835 IPR002471 Peptidase S9, serine active site GJQ55_00840 IPR018045 Sulphate anion transporter, conserved site GJQ55_00840 IPR011547 SLC26A/SulP transporter domain GJQ55_00840 IPR001902 SLC26A/SulP transporter GJQ55_00840 IPR002645 STAS domain GJQ55_00840 IPR036513 STAS domain superfamily GJQ55_00845 IPR003746 Protein of unknown function DUF167 GJQ55_00845 IPR036591 YggU-like superfamily GJQ55_00845 IPR005228 Conserved hypothetical protein CHP00251 GJQ55_00850 IPR003425 CCB3/YggT GJQ55_00855 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal GJQ55_00855 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain GJQ55_00855 IPR000304 Pyrroline-5-carboxylate reductase GJQ55_00855 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GJQ55_00855 IPR036291 NAD(P)-binding domain superfamily GJQ55_00860 IPR001608 Alanine racemase, N-terminal GJQ55_00860 IPR029066 PLP-binding barrel GJQ55_00860 IPR011078 Pyridoxal phosphate homeostasis protein GJQ55_00865 IPR003593 AAA+ ATPase domain GJQ55_00865 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_00865 IPR006321 Pilus retraction protein PilT GJQ55_00865 IPR001482 Type II/IV secretion system protein GJQ55_00870 IPR006321 Pilus retraction protein PilT GJQ55_00870 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_00870 IPR001482 Type II/IV secretion system protein GJQ55_00875 IPR029787 Nucleotide cyclase GJQ55_00875 IPR005330 MHYT domain GJQ55_00875 IPR000160 GGDEF domain GJQ55_00875 IPR035919 EAL domain superfamily GJQ55_00875 IPR001633 EAL domain GJQ55_00880 IPR007346 Endonuclease I GJQ55_00885 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GJQ55_00885 IPR035906 MetI-like superfamily GJQ55_00885 IPR005769 ABC transporter, permease PhnE/PtxC GJQ55_00890 IPR039562 Membrane fusion protein, biotin-lipoyl like domain GJQ55_00895 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_00895 IPR003593 AAA+ ATPase domain GJQ55_00895 IPR000412 ABC-2 transporter GJQ55_00895 IPR003439 ABC transporter-like GJQ55_00895 IPR017871 ABC transporter, conserved site GJQ55_00900 IPR000412 ABC-2 transporter GJQ55_00905 IPR011399 Nitrous oxide reductase expression regulator NosR GJQ55_00905 IPR007329 FMN-binding GJQ55_00905 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain GJQ55_00910 IPR023644 Nitrous-oxide reductase GJQ55_00910 IPR041114 Nitrous oxide reductase, propeller repeat 1 GJQ55_00910 IPR001505 Copper centre Cu(A) GJQ55_00910 IPR008972 Cupredoxin GJQ55_00910 IPR011045 Nitrous oxide reductase, N-terminal GJQ55_00910 IPR041142 Nitrous oxide reductase, propeller repeat 2 GJQ55_00910 IPR006311 Twin-arginine translocation pathway, signal sequence GJQ55_00910 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal GJQ55_00910 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GJQ55_00910 IPR034205 Nitrous-oxide reductase, C-terminal GJQ55_00910 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GJQ55_00915 IPR006633 Carbohydrate-binding/sugar hydrolysis domain GJQ55_00915 IPR026464 Nitrous oxide reductase family maturation protein NosD GJQ55_00915 IPR022441 Parallel beta-helix repeat-2 GJQ55_00915 IPR006626 Parallel beta-helix repeat GJQ55_00915 IPR012334 Pectin lyase fold GJQ55_00915 IPR011050 Pectin lyase fold/virulence factor GJQ55_00915 IPR007742 Periplasmic copper-binding protein NosD, beta helix domain GJQ55_00920 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_00920 IPR017871 ABC transporter, conserved site GJQ55_00920 IPR003439 ABC transporter-like GJQ55_00920 IPR003593 AAA+ ATPase domain GJQ55_00925 IPR032688 ABC-2 family transporter protein GJQ55_00930 IPR008719 Nitrous oxide reductase accessory protein NosL GJQ55_00935 IPR003369 Sec-independent protein translocase protein TatA/B/E GJQ55_00935 IPR006312 Sec-independent protein translocase protein TatA/E GJQ55_00945 IPR010102 Succinate semialdehyde dehydrogenase GJQ55_00945 IPR016161 Aldehyde/histidinol dehydrogenase GJQ55_00945 IPR016163 Aldehyde dehydrogenase, C-terminal GJQ55_00945 IPR016160 Aldehyde dehydrogenase, cysteine active site GJQ55_00945 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GJQ55_00945 IPR016162 Aldehyde dehydrogenase, N-terminal GJQ55_00945 IPR015590 Aldehyde dehydrogenase domain GJQ55_00955 IPR036291 NAD(P)-binding domain superfamily GJQ55_00955 IPR011032 GroES-like superfamily GJQ55_00955 IPR013154 Alcohol dehydrogenase, N-terminal GJQ55_00955 IPR013149 Alcohol dehydrogenase, C-terminal GJQ55_00955 IPR020843 Polyketide synthase, enoylreductase domain GJQ55_00955 IPR014188 Acrylyl-CoA reductase AcuI GJQ55_00975 IPR003841 Sodium-dependent phosphate transport protein GJQ55_00975 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein GJQ55_00980 IPR029056 Ribokinase-like GJQ55_00980 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GJQ55_00980 IPR011611 Carbohydrate kinase PfkB GJQ55_00985 IPR030855 Bifunctional ligase/repressor BirA GJQ55_00985 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GJQ55_00985 IPR004409 Biotin operon repressor, helix-turn-helix domain GJQ55_00985 IPR003142 Biotin protein ligase, C-terminal GJQ55_00985 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GJQ55_00985 IPR013196 Helix-turn-helix, type 11 GJQ55_00985 IPR008988 Transcriptional repressor, C-terminal GJQ55_00985 IPR036388 Winged helix-like DNA-binding domain superfamily GJQ55_00985 IPR036390 Winged helix DNA-binding domain superfamily GJQ55_00990 IPR004619 Type III pantothenate kinase GJQ55_01015 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal GJQ55_01015 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GJQ55_01015 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal GJQ55_01015 IPR009000 Translation protein, beta-barrel domain superfamily GJQ55_01015 IPR000795 Transcription factor, GTP-binding domain GJQ55_01015 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_01015 IPR031157 Tr-type G domain, conserved site GJQ55_01015 IPR033720 Elongation factor Tu, domain 2 GJQ55_01015 IPR004161 Translation elongation factor EFTu-like, domain 2 GJQ55_01015 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain GJQ55_01015 IPR005225 Small GTP-binding protein domain GJQ55_01025 IPR005807 SecE subunit of protein translocation complex, bacterial-like GJQ55_01025 IPR038379 SecE superfamily GJQ55_01025 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GJQ55_01030 IPR008991 Translation protein SH3-like domain superfamily GJQ55_01030 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site GJQ55_01030 IPR001062 Transcription antitermination protein, NusG GJQ55_01030 IPR005824 KOW GJQ55_01030 IPR036735 NusG, N-terminal domain superfamily GJQ55_01030 IPR006645 NusG, N-terminal GJQ55_01030 IPR014722 Ribosomal protein L2, domain 2 GJQ55_01035 IPR020784 Ribosomal protein L11, N-terminal GJQ55_01035 IPR020783 Ribosomal protein L11, C-terminal GJQ55_01035 IPR036769 Ribosomal protein L11, C-terminal domain superfamily GJQ55_01035 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily GJQ55_01035 IPR000911 Ribosomal protein L11/L12 GJQ55_01035 IPR006519 Ribosomal protein L11, bacterial-type GJQ55_01040 IPR005878 Ribosomal protein L1, bacterial-type GJQ55_01040 IPR002143 Ribosomal protein L1 GJQ55_01040 IPR023674 Ribosomal protein L1-like GJQ55_01040 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein GJQ55_01040 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich GJQ55_01040 IPR023673 Ribosomal protein L1, conserved site GJQ55_01045 IPR001790 Ribosomal protein L10P GJQ55_01045 IPR022973 Ribosomal protein L10 GJQ55_01045 IPR002363 Ribosomal protein L10, eubacterial, conserved site GJQ55_01050 IPR000206 Ribosomal protein L7/L12 GJQ55_01050 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like GJQ55_01050 IPR013823 Ribosomal protein L7/L12, C-terminal GJQ55_01050 IPR008932 Ribosomal protein L7/L12, oligomerisation GJQ55_01050 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily GJQ55_01055 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GJQ55_01055 IPR014724 RNA polymerase Rpb2, OB-fold GJQ55_01055 IPR007641 RNA polymerase Rpb2, domain 7 GJQ55_01055 IPR007645 RNA polymerase Rpb2, domain 3 GJQ55_01055 IPR007642 RNA polymerase Rpb2, domain 2 GJQ55_01055 IPR015712 DNA-directed RNA polymerase, subunit 2 GJQ55_01055 IPR007121 RNA polymerase, beta subunit, conserved site GJQ55_01055 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GJQ55_01055 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GJQ55_01055 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain GJQ55_01055 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GJQ55_01055 IPR007644 RNA polymerase, beta subunit, protrusion GJQ55_01060 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GJQ55_01060 IPR000722 RNA polymerase, alpha subunit GJQ55_01060 IPR006592 RNA polymerase, N-terminal GJQ55_01060 IPR007080 RNA polymerase Rpb1, domain 1 GJQ55_01060 IPR007066 RNA polymerase Rpb1, domain 3 GJQ55_01060 IPR042102 RNA polymerase Rpb1, domain 3 superfamily GJQ55_01060 IPR038120 RNA polymerase Rpb1, funnel domain superfamily GJQ55_01060 IPR007081 RNA polymerase Rpb1, domain 5 GJQ55_01060 IPR007083 RNA polymerase Rpb1, domain 4 GJQ55_01065 IPR005679 Ribosomal protein S12, bacterial-type GJQ55_01065 IPR012340 Nucleic acid-binding, OB-fold GJQ55_01065 IPR006032 Ribosomal protein S12/S23 GJQ55_01070 IPR000235 Ribosomal protein S5/S7 GJQ55_01070 IPR005717 Ribosomal protein S7, bacterial/organellar-type GJQ55_01070 IPR023798 Ribosomal protein S7 domain GJQ55_01070 IPR036823 Ribosomal protein S7 domain superfamily GJQ55_01075 IPR004540 Translation elongation factor EFG/EF2 GJQ55_01075 IPR005517 Translation elongation factor EFG/EF2, domain IV GJQ55_01075 IPR005225 Small GTP-binding protein domain GJQ55_01075 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup GJQ55_01075 IPR020568 Ribosomal protein S5 domain 2-type fold GJQ55_01075 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_01075 IPR009000 Translation protein, beta-barrel domain superfamily GJQ55_01075 IPR004161 Translation elongation factor EFTu-like, domain 2 GJQ55_01075 IPR031157 Tr-type G domain, conserved site GJQ55_01075 IPR035647 EF-G domain III/V-like GJQ55_01075 IPR041095 Elongation Factor G, domain II GJQ55_01075 IPR009022 Elongation factor G, domain III GJQ55_01075 IPR035649 EFG, domain V GJQ55_01075 IPR000640 Elongation factor EFG, domain V-like GJQ55_01075 IPR000795 Transcription factor, GTP-binding domain GJQ55_01080 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal GJQ55_01080 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GJQ55_01080 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal GJQ55_01080 IPR009000 Translation protein, beta-barrel domain superfamily GJQ55_01080 IPR000795 Transcription factor, GTP-binding domain GJQ55_01080 IPR005225 Small GTP-binding protein domain GJQ55_01080 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_01080 IPR033720 Elongation factor Tu, domain 2 GJQ55_01080 IPR031157 Tr-type G domain, conserved site GJQ55_01080 IPR004161 Translation elongation factor EFTu-like, domain 2 GJQ55_01080 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain GJQ55_01085 IPR041095 Elongation Factor G, domain II GJQ55_01085 IPR005517 Translation elongation factor EFG/EF2, domain IV GJQ55_01085 IPR004540 Translation elongation factor EFG/EF2 GJQ55_01085 IPR009000 Translation protein, beta-barrel domain superfamily GJQ55_01085 IPR000795 Transcription factor, GTP-binding domain GJQ55_01085 IPR005225 Small GTP-binding protein domain GJQ55_01085 IPR009022 Elongation factor G, domain III GJQ55_01085 IPR035647 EF-G domain III/V-like GJQ55_01085 IPR000640 Elongation factor EFG, domain V-like GJQ55_01085 IPR004161 Translation elongation factor EFTu-like, domain 2 GJQ55_01085 IPR031157 Tr-type G domain, conserved site GJQ55_01085 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_01085 IPR020568 Ribosomal protein S5 domain 2-type fold GJQ55_01085 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup GJQ55_01085 IPR035649 EFG, domain V GJQ55_01090 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal GJQ55_01090 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GJQ55_01090 IPR009000 Translation protein, beta-barrel domain superfamily GJQ55_01090 IPR000795 Transcription factor, GTP-binding domain GJQ55_01090 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain GJQ55_01090 IPR004161 Translation elongation factor EFTu-like, domain 2 GJQ55_01090 IPR033720 Elongation factor Tu, domain 2 GJQ55_01090 IPR031157 Tr-type G domain, conserved site GJQ55_01090 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_01090 IPR005225 Small GTP-binding protein domain GJQ55_01090 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal GJQ55_01095 IPR001848 Ribosomal protein S10 GJQ55_01095 IPR018268 Ribosomal protein S10, conserved site GJQ55_01095 IPR027486 Ribosomal protein S10 domain GJQ55_01095 IPR036838 Ribosomal protein S10 domain superfamily GJQ55_01100 IPR000597 Ribosomal protein L3 GJQ55_01100 IPR019927 Ribosomal protein L3, bacterial/organelle-type GJQ55_01100 IPR019926 Ribosomal protein L3, conserved site GJQ55_01100 IPR009000 Translation protein, beta-barrel domain superfamily GJQ55_01105 IPR013005 50S ribosomal protein uL4 GJQ55_01105 IPR023574 Ribosomal protein L4 domain superfamily GJQ55_01105 IPR002136 Ribosomal protein L4/L1e GJQ55_01110 IPR013025 Ribosomal protein L25/L23 GJQ55_01110 IPR001014 Ribosomal protein L23/L25, conserved site GJQ55_01110 IPR012678 Ribosomal protein L23/L15e core domain superfamily GJQ55_01110 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily GJQ55_01115 IPR012340 Nucleic acid-binding, OB-fold GJQ55_01115 IPR014722 Ribosomal protein L2, domain 2 GJQ55_01115 IPR002171 Ribosomal protein L2 GJQ55_01115 IPR005880 Ribosomal protein L2, bacterial/organellar-type GJQ55_01115 IPR022669 Ribosomal protein L2, C-terminal GJQ55_01115 IPR022671 Ribosomal protein L2, conserved site GJQ55_01115 IPR014726 Ribosomal protein L2, domain 3 GJQ55_01115 IPR008991 Translation protein SH3-like domain superfamily GJQ55_01115 IPR022666 Ribosomal Proteins L2, RNA binding domain GJQ55_01120 IPR023575 Ribosomal protein S19, superfamily GJQ55_01120 IPR002222 Ribosomal protein S19/S15 GJQ55_01120 IPR020934 Ribosomal protein S19 conserved site GJQ55_01120 IPR005732 Ribosomal protein S19, bacterial-type GJQ55_01125 IPR036394 Ribosomal protein L22/L17 superfamily GJQ55_01125 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GJQ55_01125 IPR001063 Ribosomal protein L22/L17 GJQ55_01125 IPR018260 Ribosomal protein L22/L17, conserved site GJQ55_01130 IPR004087 K Homology domain GJQ55_01130 IPR015946 K homology domain-like, alpha/beta GJQ55_01130 IPR004044 K Homology domain, type 2 GJQ55_01130 IPR005704 Ribosomal protein S3, bacterial-type GJQ55_01130 IPR001351 Ribosomal protein S3, C-terminal GJQ55_01130 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GJQ55_01130 IPR018280 Ribosomal protein S3, conserved site GJQ55_01130 IPR009019 K homology domain superfamily, prokaryotic type GJQ55_01135 IPR016180 Ribosomal protein L10e/L16 GJQ55_01135 IPR036920 Ribosomal protein L10e/L16 superfamily GJQ55_01135 IPR020798 Ribosomal protein L16, conserved site GJQ55_01135 IPR000114 Ribosomal protein L16 GJQ55_01140 IPR018254 Ribosomal protein L29, conserved site GJQ55_01140 IPR036049 Ribosomal protein L29/L35 superfamily GJQ55_01140 IPR001854 Ribosomal protein L29/L35 GJQ55_01145 IPR012340 Nucleic acid-binding, OB-fold GJQ55_01145 IPR019984 30S ribosomal protein S17 GJQ55_01145 IPR000266 Ribosomal protein S17/S11 GJQ55_01145 IPR019979 Ribosomal protein S17, conserved site GJQ55_01150 IPR036853 Ribosomal protein L14 superfamily GJQ55_01150 IPR000218 Ribosomal protein L14P GJQ55_01150 IPR005745 Ribosomal protein L14P, bacterial-type GJQ55_01150 IPR019972 Ribosomal protein L14P, conserved site GJQ55_01155 IPR014722 Ribosomal protein L2, domain 2 GJQ55_01155 IPR005824 KOW GJQ55_01155 IPR041988 Ribosomal Protein L26/L24, KOW domain GJQ55_01155 IPR003256 Ribosomal protein L24 GJQ55_01155 IPR005825 Ribosomal protein L24/L26, conserved site GJQ55_01155 IPR008991 Translation protein SH3-like domain superfamily GJQ55_01160 IPR002132 Ribosomal protein L5 GJQ55_01160 IPR020930 Ribosomal protein L5, bacterial-type GJQ55_01160 IPR031309 Ribosomal protein L5, C-terminal GJQ55_01160 IPR020929 Ribosomal protein L5, conserved site GJQ55_01160 IPR022803 Ribosomal protein L5 domain superfamily GJQ55_01160 IPR031310 Ribosomal protein L5, N-terminal GJQ55_01165 IPR001209 Ribosomal protein S14 GJQ55_01165 IPR023036 Ribosomal protein S14, bacterial/plastid GJQ55_01165 IPR018271 Ribosomal protein S14, conserved site GJQ55_01170 IPR035987 Ribosomal protein S8 superfamily GJQ55_01170 IPR000630 Ribosomal protein S8 GJQ55_01175 IPR019906 Ribosomal protein L6, bacterial-type GJQ55_01175 IPR002358 Ribosomal protein L6, conserved site GJQ55_01175 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GJQ55_01175 IPR000702 Ribosomal protein L6 GJQ55_01175 IPR020040 Ribosomal protein L6, alpha-beta domain GJQ55_01180 IPR004389 Ribosomal protein L18, bacterial-type GJQ55_01180 IPR005484 Ribosomal protein L18 GJQ55_01185 IPR000851 Ribosomal protein S5 GJQ55_01185 IPR005712 Ribosomal protein S5, bacterial-type GJQ55_01185 IPR005324 Ribosomal protein S5, C-terminal GJQ55_01185 IPR020568 Ribosomal protein S5 domain 2-type fold GJQ55_01185 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup GJQ55_01185 IPR013810 Ribosomal protein S5, N-terminal GJQ55_01185 IPR018192 Ribosomal protein S5, N-terminal, conserved site GJQ55_01190 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain GJQ55_01190 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily GJQ55_01190 IPR005996 Ribosomal protein L30, bacterial-type GJQ55_01190 IPR018038 Ribosomal protein L30, conserved site GJQ55_01195 IPR036227 Ribosomal L18e/L15P superfamily GJQ55_01195 IPR030878 Ribosomal protein L15 GJQ55_01195 IPR005749 Ribosomal protein L15, bacterial-type GJQ55_01195 IPR001196 Ribosomal protein L15, conserved site GJQ55_01195 IPR021131 Ribosomal protein L18e/L15P GJQ55_01200 IPR026593 Protein translocase subunit SecY GJQ55_01200 IPR002208 SecY/SEC61-alpha family GJQ55_01200 IPR030659 SecY conserved site GJQ55_01200 IPR023201 SecY domain superfamily GJQ55_01205 IPR000473 Ribosomal protein L36 GJQ55_01205 IPR035977 Ribosomal protein L36 superfamily GJQ55_01210 IPR001892 Ribosomal protein S13 GJQ55_01210 IPR018269 Ribosomal protein S13, conserved site GJQ55_01210 IPR027437 30s ribosomal protein S13, C-terminal GJQ55_01210 IPR010979 Ribosomal protein S13-like, H2TH GJQ55_01210 IPR019980 Ribosomal protein S13, bacterial-type GJQ55_01215 IPR001971 Ribosomal protein S11 GJQ55_01215 IPR019981 Ribosomal protein S11, bacterial-type GJQ55_01215 IPR018102 Ribosomal S11, conserved site GJQ55_01215 IPR036967 Ribosomal protein S11 superfamily GJQ55_01220 IPR036986 RNA-binding S4 domain superfamily GJQ55_01220 IPR002942 RNA-binding S4 domain GJQ55_01220 IPR018079 Ribosomal protein S4, conserved site GJQ55_01220 IPR001912 Ribosomal protein S4/S9, N-terminal GJQ55_01220 IPR022801 Ribosomal protein S4/S9 GJQ55_01220 IPR005709 Ribosomal protein S4, bacterial-type GJQ55_01225 IPR011262 DNA-directed RNA polymerase, insert domain GJQ55_01225 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GJQ55_01225 IPR011773 DNA-directed RNA polymerase, alpha subunit GJQ55_01225 IPR036603 RNA polymerase, RBP11-like subunit GJQ55_01225 IPR011260 RNA polymerase, alpha subunit, C-terminal GJQ55_01225 IPR036643 DNA-directed RNA polymerase, insert domain superfamily GJQ55_01230 IPR000456 Ribosomal protein L17 GJQ55_01230 IPR036373 Ribosomal protein L17 superfamily GJQ55_01235 IPR004681 TRAP transporter large membrane protein DctM GJQ55_01235 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit GJQ55_01255 IPR000792 Transcription regulator LuxR, C-terminal GJQ55_01255 IPR036388 Winged helix-like DNA-binding domain superfamily GJQ55_01255 IPR035919 EAL domain superfamily GJQ55_01255 IPR001633 EAL domain GJQ55_01255 IPR016032 Signal transduction response regulator, C-terminal effector GJQ55_01260 IPR003593 AAA+ ATPase domain GJQ55_01260 IPR011006 CheY-like superfamily GJQ55_01260 IPR009057 Homeobox-like domain superfamily GJQ55_01260 IPR002197 DNA binding HTH domain, Fis-type GJQ55_01260 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_01260 IPR001789 Signal transduction response regulator, receiver domain GJQ55_01260 IPR002078 RNA polymerase sigma factor 54 interaction domain GJQ55_01260 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 GJQ55_01260 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 GJQ55_01260 IPR025944 Sigma-54 interaction domain, conserved site GJQ55_01265 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GJQ55_01270 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GJQ55_01275 IPR012994 Membrane bound YbgT-like GJQ55_01275 IPR011724 Cyd operon protein YbgT GJQ55_01280 IPR001763 Rhodanese-like domain GJQ55_01280 IPR036873 Rhodanese-like domain superfamily GJQ55_01295 IPR005281 Monovalent cation:proton antiporter, subunit B GJQ55_01295 IPR025383 Domain of unknown function DUF4040 GJQ55_01295 IPR007182 Na+/H+ antiporter MnhB subunit-related protein GJQ55_01295 IPR005663 Monovalent cation proton antiporter subunit A GJQ55_01295 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit GJQ55_01295 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal GJQ55_01300 IPR006673 Mnh complex subunit C1 GJQ55_01300 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like GJQ55_01305 IPR004775 Na(+)/H(+) antiporter subunit D1 GJQ55_01305 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit GJQ55_01310 IPR002758 Na+/H+ antiporter subunit E GJQ55_01315 IPR007208 Na(+)/H(+) antiporter subunit F-like GJQ55_01320 IPR005133 Na+/H+ antiporter subunit G GJQ55_01325 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup GJQ55_01325 IPR003593 AAA+ ATPase domain GJQ55_01325 IPR004504 DNA repair protein RadA GJQ55_01325 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_01325 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain GJQ55_01325 IPR020568 Ribosomal protein S5 domain 2-type fold GJQ55_01325 IPR041166 LapB, rubredoxin metal binding domain GJQ55_01330 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GJQ55_01330 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GJQ55_01330 IPR015424 Pyridoxal phosphate-dependent transferase GJQ55_01330 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GJQ55_01330 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GJQ55_01345 IPR006700 Ribosomal RNA small subunit methyltransferase E GJQ55_01345 IPR029028 Alpha/beta knot methyltransferases GJQ55_01345 IPR015947 PUA-like superfamily GJQ55_01345 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal GJQ55_01355 IPR006665 OmpA-like domain GJQ55_01355 IPR025713 Motility protein B, N-terminal domain GJQ55_01355 IPR036737 OmpA-like domain superfamily GJQ55_01360 IPR000540 Flagellar motor protein MotA, conserved site GJQ55_01360 IPR002898 MotA/TolQ/ExbB proton channel GJQ55_01365 IPR037004 Exonuclease VII, small subunit superfamily GJQ55_01365 IPR003761 Exonuclease VII, small subunit GJQ55_01370 IPR008949 Isoprenoid synthase domain superfamily GJQ55_01370 IPR033749 Polyprenyl synthetase, conserved site GJQ55_01370 IPR000092 Polyprenyl synthetase GJQ55_01375 IPR033248 Transketolase, C-terminal domain GJQ55_01375 IPR020826 Transketolase binding site GJQ55_01375 IPR005475 Transketolase-like, pyrimidine-binding domain GJQ55_01375 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GJQ55_01375 IPR029061 Thiamin diphosphate-binding fold GJQ55_01375 IPR005477 Deoxyxylulose-5-phosphate synthase GJQ55_01380 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GJQ55_01380 IPR035965 PAS domain superfamily GJQ55_01380 IPR000700 PAS-associated, C-terminal GJQ55_01380 IPR000014 PAS domain GJQ55_01380 IPR013767 PAS fold GJQ55_01380 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GJQ55_01380 IPR005467 Histidine kinase domain GJQ55_01380 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GJQ55_01380 IPR003594 Histidine kinase/HSP90-like ATPase GJQ55_01380 IPR003660 HAMP domain GJQ55_01380 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GJQ55_01385 IPR002078 RNA polymerase sigma factor 54 interaction domain GJQ55_01385 IPR025944 Sigma-54 interaction domain, conserved site GJQ55_01385 IPR003593 AAA+ ATPase domain GJQ55_01385 IPR011006 CheY-like superfamily GJQ55_01385 IPR009057 Homeobox-like domain superfamily GJQ55_01385 IPR002197 DNA binding HTH domain, Fis-type GJQ55_01385 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 GJQ55_01385 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 GJQ55_01385 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_01385 IPR001789 Signal transduction response regulator, receiver domain GJQ55_01390 IPR032677 GTP cyclohydrolase II GJQ55_01390 IPR000926 GTP cyclohydrolase II, RibA GJQ55_01390 IPR036144 RibA-like superfamily GJQ55_01395 IPR007395 Putative neutral zinc metallopeptidase GJQ55_01400 IPR011991 ArsR-like helix-turn-helix domain GJQ55_01400 IPR018334 ArsR-type transcription regulator, HTH motif GJQ55_01400 IPR001845 HTH ArsR-type DNA-binding domain GJQ55_01400 IPR036388 Winged helix-like DNA-binding domain superfamily GJQ55_01400 IPR036390 Winged helix DNA-binding domain superfamily GJQ55_01405 IPR004706 Arsenical-resistance protein Acr3 GJQ55_01405 IPR038770 Sodium/solute symporter superfamily GJQ55_01405 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GJQ55_01410 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GJQ55_01410 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GJQ55_01410 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GJQ55_01410 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GJQ55_01410 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GJQ55_01410 IPR036291 NAD(P)-binding domain superfamily GJQ55_01420 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 GJQ55_01420 IPR011032 GroES-like superfamily GJQ55_01420 IPR036291 NAD(P)-binding domain superfamily GJQ55_01420 IPR020843 Polyketide synthase, enoylreductase domain GJQ55_01420 IPR013154 Alcohol dehydrogenase, N-terminal GJQ55_01420 IPR013149 Alcohol dehydrogenase, C-terminal GJQ55_01420 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GJQ55_01435 IPR013785 Aldolase-type TIM barrel GJQ55_01435 IPR000644 CBS domain GJQ55_01435 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GJQ55_01435 IPR001093 IMP dehydrogenase/GMP reductase GJQ55_01435 IPR005990 Inosine-5'-monophosphate dehydrogenase GJQ55_01445 IPR001867 OmpR/PhoB-type DNA-binding domain GJQ55_01445 IPR001789 Signal transduction response regulator, receiver domain GJQ55_01445 IPR039420 Transcriptional regulatory protein WalR-like GJQ55_01445 IPR011006 CheY-like superfamily GJQ55_01445 IPR036388 Winged helix-like DNA-binding domain superfamily GJQ55_01450 IPR003594 Histidine kinase/HSP90-like ATPase GJQ55_01450 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GJQ55_01450 IPR005467 Histidine kinase domain GJQ55_01450 IPR003660 HAMP domain GJQ55_01450 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GJQ55_01450 IPR031930 2-component histidine kinase, sensor domain GJQ55_01450 IPR038428 2-component histidine kinase, sensor domain superfamily GJQ55_01450 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GJQ55_01450 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GJQ55_01460 IPR013785 Aldolase-type TIM barrel GJQ55_01460 IPR004136 Nitronate monooxygenase GJQ55_01465 IPR029058 Alpha/Beta hydrolase fold GJQ55_01465 IPR000073 Alpha/beta hydrolase fold-1 GJQ55_01470 IPR004961 Lipase chaperone GJQ55_01475 IPR022337 Inositol monophosphatase, SuhB GJQ55_01475 IPR033942 Inositol monophosphatase GJQ55_01475 IPR000760 Inositol monophosphatase-like GJQ55_01475 IPR020583 Inositol monophosphatase, metal-binding site GJQ55_01475 IPR020550 Inositol monophosphatase, conserved site GJQ55_01480 IPR013830 SGNH hydrolase-type esterase domain GJQ55_01480 IPR036514 SGNH hydrolase superfamily GJQ55_01485 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_01485 IPR003593 AAA+ ATPase domain GJQ55_01485 IPR003439 ABC transporter-like GJQ55_01485 IPR017871 ABC transporter, conserved site GJQ55_01490 IPR038766 Membrane component of ABC transporter, predicted GJQ55_01495 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_01495 IPR003495 CobW/HypB/UreG, nucleotide-binding domain GJQ55_01495 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal GJQ55_01505 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GJQ55_01505 IPR005218 Diacylglycerol/lipid kinase GJQ55_01505 IPR001206 Diacylglycerol kinase, catalytic domain GJQ55_01505 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily GJQ55_01520 IPR006683 Thioesterase domain GJQ55_01520 IPR029069 HotDog domain superfamily GJQ55_01520 IPR003736 Phenylacetic acid degradation-related domain GJQ55_01530 IPR004026 Ada DNA repair, metal-binding GJQ55_01530 IPR016221 Bifunctional regulatory protein Ada GJQ55_01530 IPR009057 Homeobox-like domain superfamily GJQ55_01530 IPR018060 DNA binding HTH domain, AraC-type GJQ55_01530 IPR018062 HTH domain AraC-type, conserved site GJQ55_01530 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GJQ55_01530 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GJQ55_01530 IPR035451 Ada-like domain superfamily GJQ55_01530 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GJQ55_01530 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GJQ55_01530 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain GJQ55_01530 IPR036388 Winged helix-like DNA-binding domain superfamily GJQ55_01535 IPR008963 Purple acid phosphatase-like, N-terminal GJQ55_01535 IPR006311 Twin-arginine translocation pathway, signal sequence GJQ55_01535 IPR038607 PhoD-like superfamily GJQ55_01535 IPR018946 Alkaline phosphatase D-related GJQ55_01535 IPR032093 Phospholipase D, N-terminal GJQ55_01540 IPR029058 Alpha/Beta hydrolase fold GJQ55_01540 IPR000073 Alpha/beta hydrolase fold-1 GJQ55_01540 IPR000639 Epoxide hydrolase-like GJQ55_01540 IPR023791 2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate hydrolase GJQ55_01545 IPR001107 Band 7 domain GJQ55_01545 IPR036013 Band 7/SPFH domain superfamily GJQ55_01545 IPR018080 Band 7/stomatin-like, conserved site GJQ55_01545 IPR001972 Stomatin family GJQ55_01555 IPR032816 SNARE associated Golgi protein GJQ55_01560 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GJQ55_01560 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GJQ55_01560 IPR015424 Pyridoxal phosphate-dependent transferase GJQ55_01560 IPR006237 L-methionine gamma-lyase GJQ55_01560 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GJQ55_01565 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain GJQ55_01565 IPR020103 Pseudouridine synthase, catalytic domain superfamily GJQ55_01565 IPR006145 Pseudouridine synthase, RsuA/RluA GJQ55_01565 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GJQ55_01565 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GJQ55_01565 IPR002942 RNA-binding S4 domain GJQ55_01565 IPR036986 RNA-binding S4 domain superfamily GJQ55_01615 IPR036188 FAD/NAD(P)-binding domain superfamily GJQ55_01615 IPR020946 Flavin monooxygenase-like GJQ55_01620 IPR029058 Alpha/Beta hydrolase fold GJQ55_01620 IPR000073 Alpha/beta hydrolase fold-1 GJQ55_01620 IPR000639 Epoxide hydrolase-like GJQ55_01620 IPR023791 2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate hydrolase GJQ55_01635 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GJQ55_01635 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GJQ55_01635 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC GJQ55_01650 IPR010918 PurM-like, C-terminal domain GJQ55_01650 IPR036676 PurM-like, C-terminal domain superfamily GJQ55_01650 IPR016188 PurM-like, N-terminal domain GJQ55_01650 IPR036921 PurM-like, N-terminal domain superfamily GJQ55_01650 IPR006283 Thiamine-monophosphate kinase GJQ55_01655 IPR035926 NusB-like superfamily GJQ55_01655 IPR011605 NusB antitermination factor GJQ55_01655 IPR006027 NusB/RsmB/TIM44 GJQ55_01660 IPR036467 Lumazine/riboflavin synthase superfamily GJQ55_01660 IPR002180 Lumazine/riboflavin synthase GJQ55_01660 IPR034964 Lumazine synthase GJQ55_01665 IPR032677 GTP cyclohydrolase II GJQ55_01665 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily GJQ55_01665 IPR036144 RibA-like superfamily GJQ55_01665 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GJQ55_01670 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily GJQ55_01670 IPR026017 Lumazine-binding domain GJQ55_01670 IPR001783 Lumazine-binding protein GJQ55_01670 IPR017938 Riboflavin synthase-like beta-barrel GJQ55_01675 IPR016192 APOBEC/CMP deaminase, zinc-binding GJQ55_01675 IPR002125 Cytidine and deoxycytidylate deaminase domain GJQ55_01675 IPR011549 Riboflavin-specific deaminase, C-terminal GJQ55_01675 IPR016193 Cytidine deaminase-like GJQ55_01675 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GJQ55_01675 IPR024072 Dihydrofolate reductase-like domain superfamily GJQ55_01675 IPR004794 Riboflavin biosynthesis protein RibD GJQ55_01680 IPR003796 Ribonucleotide reductase regulator NrdR-like GJQ55_01680 IPR005144 ATP-cone domain GJQ55_01690 IPR001085 Serine hydroxymethyltransferase GJQ55_01690 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GJQ55_01690 IPR039429 Serine hydroxymethyltransferase-like domain GJQ55_01690 IPR015424 Pyridoxal phosphate-dependent transferase GJQ55_01690 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GJQ55_01690 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GJQ55_01695 IPR029787 Nucleotide cyclase GJQ55_01695 IPR005330 MHYT domain GJQ55_01695 IPR000160 GGDEF domain GJQ55_01695 IPR035919 EAL domain superfamily GJQ55_01695 IPR001633 EAL domain GJQ55_01700 IPR003593 AAA+ ATPase domain GJQ55_01700 IPR003439 ABC transporter-like GJQ55_01700 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_01700 IPR022374 Energy-dependent translational throttle protein EttA GJQ55_01700 IPR017871 ABC transporter, conserved site GJQ55_01700 IPR032781 ABC-transporter extension domain GJQ55_01705 IPR009875 PilZ domain GJQ55_01705 IPR027021 Cyclic di-GMP binding protein, PA4608 type GJQ55_01710 IPR011234 Fumarylacetoacetase-like, C-terminal GJQ55_01710 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GJQ55_01715 IPR000424 Primosome PriB/single-strand DNA-binding GJQ55_01715 IPR011344 Single-stranded DNA-binding protein GJQ55_01715 IPR012340 Nucleic acid-binding, OB-fold GJQ55_01720 IPR036259 MFS transporter superfamily GJQ55_01720 IPR011701 Major facilitator superfamily GJQ55_01720 IPR020846 Major facilitator superfamily domain GJQ55_01725 IPR016032 Signal transduction response regulator, C-terminal effector GJQ55_01725 IPR036388 Winged helix-like DNA-binding domain superfamily GJQ55_01725 IPR000792 Transcription regulator LuxR, C-terminal GJQ55_01730 IPR003439 ABC transporter-like GJQ55_01730 IPR017871 ABC transporter, conserved site GJQ55_01730 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_01730 IPR004602 UvrABC system subunit A GJQ55_01730 IPR041552 UvrA DNA-binding domain GJQ55_01730 IPR041102 UvrA, interaction domain GJQ55_01755 IPR002912 ACT domain GJQ55_01755 IPR036412 HAD-like superfamily GJQ55_01755 IPR023214 HAD superfamily GJQ55_01755 IPR023190 Phosphoserine phosphatase, domain 2 GJQ55_01770 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 GJQ55_01770 IPR033177 Phosphatidylserine decarboxylase GJQ55_01770 IPR003817 Phosphatidylserine decarboxylase-related GJQ55_01775 IPR001763 Rhodanese-like domain GJQ55_01775 IPR036873 Rhodanese-like domain superfamily GJQ55_01775 IPR001307 Thiosulphate sulfurtransferase, conserved site GJQ55_01785 IPR000540 Flagellar motor protein MotA, conserved site GJQ55_01785 IPR022522 Flagellar motor stator, MotA GJQ55_01785 IPR002898 MotA/TolQ/ExbB proton channel GJQ55_01790 IPR025713 Motility protein B, N-terminal domain GJQ55_01790 IPR006665 OmpA-like domain GJQ55_01790 IPR036737 OmpA-like domain superfamily GJQ55_01795 IPR010914 RsgA GTPase domain GJQ55_01795 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_01795 IPR012340 Nucleic acid-binding, OB-fold GJQ55_01795 IPR004881 Ribosome biogenesis GTPase RsgA GJQ55_01795 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain GJQ55_01800 IPR036397 Ribonuclease H superfamily GJQ55_01800 IPR022894 Oligoribonuclease GJQ55_01800 IPR012337 Ribonuclease H-like superfamily GJQ55_01800 IPR013520 Exonuclease, RNase T/DNA polymerase III GJQ55_01805 IPR033416 Periplasmic sensor domain CHASE7 GJQ55_01805 IPR000160 GGDEF domain GJQ55_01805 IPR029787 Nucleotide cyclase GJQ55_01810 IPR004453 Epoxyqueuosine reductase QueG GJQ55_01810 IPR009051 Alpha-helical ferredoxin GJQ55_01810 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site GJQ55_01810 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain GJQ55_01810 IPR013542 Domain of unknown function DUF1730 GJQ55_01815 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GJQ55_01815 IPR029056 Ribokinase-like GJQ55_01815 IPR004443 YjeF N-terminal domain GJQ55_01815 IPR036652 YjeF N-terminal domain superfamily GJQ55_01815 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GJQ55_01820 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_01820 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GJQ55_01825 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GJQ55_01825 IPR021731 AMIN domain GJQ55_01830 IPR013507 DNA mismatch repair protein, S5 domain 2-like GJQ55_01830 IPR002099 DNA mismatch repair protein family, N-terminal GJQ55_01830 IPR020667 DNA mismatch repair protein, MutL GJQ55_01830 IPR014762 DNA mismatch repair, conserved site GJQ55_01830 IPR014790 MutL, C-terminal, dimerisation GJQ55_01830 IPR042120 MutL, C-terminal domain, dimerisation subdomain GJQ55_01830 IPR042121 MutL, C-terminal domain, regulatory subdomain GJQ55_01830 IPR037198 MutL, C-terminal domain superfamily GJQ55_01830 IPR020568 Ribosomal protein S5 domain 2-type fold GJQ55_01830 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup GJQ55_01830 IPR038973 DNA mismatch repair protein MutL/Mlh/Pms GJQ55_01830 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GJQ55_01835 IPR039657 Dimethylallyltransferase GJQ55_01835 IPR018022 IPP transferase GJQ55_01835 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_01840 IPR005001 RNA-binding protein Hfq GJQ55_01840 IPR010920 LSM domain superfamily GJQ55_01845 IPR042108 GTPase HflX, N-terminal domain superfamily GJQ55_01845 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_01845 IPR025121 GTPase HflX, N-terminal GJQ55_01845 IPR016496 GTPase HflX GJQ55_01845 IPR006073 GTP binding domain GJQ55_01845 IPR032305 GTP-binding protein, middle domain GJQ55_01845 IPR030394 HflX-type guanine nucleotide-binding (G) domain GJQ55_01845 IPR035647 EF-G domain III/V-like GJQ55_01850 IPR001107 Band 7 domain GJQ55_01850 IPR036013 Band 7/SPFH domain superfamily GJQ55_01850 IPR010201 HflK GJQ55_01850 IPR020980 Menbrane protein HflK, N-terminal GJQ55_01850 IPR001972 Stomatin family GJQ55_01855 IPR036013 Band 7/SPFH domain superfamily GJQ55_01855 IPR010200 HflC GJQ55_01855 IPR001107 Band 7 domain GJQ55_01865 IPR004517 ATP phosphoribosyltransferase regulatory subunit GJQ55_01865 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain GJQ55_01865 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GJQ55_01870 IPR018220 Adenylosuccinate synthase, GTP-binding site GJQ55_01870 IPR042109 Adenylosuccinate synthetase, domain 1 GJQ55_01870 IPR033128 Adenylosuccinate synthase, active site GJQ55_01870 IPR042110 Adenylosuccinate synthetase, domain 2 GJQ55_01870 IPR042111 Adenylosuccinate synthetase, domain 3 GJQ55_01870 IPR001114 Adenylosuccinate synthetase GJQ55_01870 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_01875 IPR023214 HAD superfamily GJQ55_01875 IPR036412 HAD-like superfamily GJQ55_01875 IPR006439 HAD hydrolase, subfamily IA GJQ55_01875 IPR023943 Enolase-phosphatase E1 GJQ55_01880 IPR023956 Acireductone dioxygenase ARD, bacteria GJQ55_01880 IPR014710 RmlC-like jelly roll fold GJQ55_01880 IPR011051 RmlC-like cupin domain superfamily GJQ55_01880 IPR004313 Acireductone dioxygenase ARD family GJQ55_01885 IPR017714 Methylthioribulose-1-phosphate dehydratase GJQ55_01885 IPR001303 Class II aldolase/adducin N-terminal GJQ55_01885 IPR036409 Class II aldolase/adducin N-terminal domain superfamily GJQ55_01890 IPR011559 Initiation factor 2B alpha/beta/delta GJQ55_01890 IPR005251 Methylthioribose-1-phosphate isomerase GJQ55_01890 IPR000649 Initiation factor 2B-related GJQ55_01890 IPR037171 NagB/RpiA transferase-like GJQ55_01895 IPR035476 Phosphoglucose isomerase, SIS domain 1 GJQ55_01895 IPR018189 Phosphoglucose isomerase, conserved site GJQ55_01895 IPR035482 Phosphoglucose isomerase, SIS domain 2 GJQ55_01895 IPR001672 Phosphoglucose isomerase (PGI) GJQ55_01895 IPR023096 Phosphoglucose isomerase, C-terminal GJQ55_01900 IPR009010 Aspartate decarboxylase-like domain superfamily GJQ55_01900 IPR003190 Aspartate decarboxylase GJQ55_01905 IPR003721 Pantoate-beta-alanine ligase GJQ55_01905 IPR042176 Pantoate-beta-alanine ligase, C-terminal domain GJQ55_01905 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold GJQ55_01910 IPR003700 Ketopantoate hydroxymethyltransferase GJQ55_01910 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GJQ55_01910 IPR040442 Pyruvate kinase-like domain superfamily GJQ55_01915 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GJQ55_01915 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily GJQ55_01920 IPR002646 Poly A polymerase, head domain GJQ55_01920 IPR025866 Polymerase A arginine-rich C-terminal domain GJQ55_01920 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain GJQ55_01920 IPR010206 Poly(A) polymerase I GJQ55_01930 IPR003593 AAA+ ATPase domain GJQ55_01930 IPR003439 ABC transporter-like GJQ55_01930 IPR017871 ABC transporter, conserved site GJQ55_01930 IPR015863 ABC transporter, hemin import, HmuV GJQ55_01930 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_01935 IPR037294 ABC transporter, BtuC-like GJQ55_01935 IPR000522 ABC transporter, permease protein, BtuC-like GJQ55_01950 IPR041465 SfsA, N-terminal OB domain GJQ55_01950 IPR005224 Sugar fermentation stimulation protein GJQ55_01950 IPR040452 Sugar fermentation stimulation protein, C-terminal GJQ55_01955 IPR004839 Aminotransferase, class I/classII GJQ55_01955 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GJQ55_01955 IPR015424 Pyridoxal phosphate-dependent transferase GJQ55_01955 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GJQ55_01960 IPR012784 RNA polymerase-binding transcription factor DksA GJQ55_01960 IPR037187 DksA, N-terminal domain superfamily GJQ55_01960 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria GJQ55_01960 IPR000962 Zinc finger, DksA/TraR C4-type GJQ55_01960 IPR020458 Zinc finger, DksA/TraR C4-type conserved site GJQ55_01965 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold GJQ55_01965 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GJQ55_01965 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GJQ55_01965 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GJQ55_01970 IPR003594 Histidine kinase/HSP90-like ATPase GJQ55_01970 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GJQ55_01970 IPR013655 PAS fold-3 GJQ55_01970 IPR035965 PAS domain superfamily GJQ55_01970 IPR013767 PAS fold GJQ55_01970 IPR001610 PAC motif GJQ55_01970 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GJQ55_01970 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GJQ55_01970 IPR005467 Histidine kinase domain GJQ55_01970 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GJQ55_01970 IPR000014 PAS domain GJQ55_01975 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 GJQ55_01975 IPR025944 Sigma-54 interaction domain, conserved site GJQ55_01975 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 GJQ55_01975 IPR002078 RNA polymerase sigma factor 54 interaction domain GJQ55_01975 IPR003593 AAA+ ATPase domain GJQ55_01975 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_01975 IPR002197 DNA binding HTH domain, Fis-type GJQ55_01975 IPR009057 Homeobox-like domain superfamily GJQ55_01975 IPR001789 Signal transduction response regulator, receiver domain GJQ55_01975 IPR011006 CheY-like superfamily GJQ55_01995 IPR036397 Ribonuclease H superfamily GJQ55_01995 IPR012337 Ribonuclease H-like superfamily GJQ55_01995 IPR023211 DNA polymerase, palm domain superfamily GJQ55_01995 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain GJQ55_01995 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain GJQ55_01995 IPR017964 DNA-directed DNA polymerase, family B, conserved site GJQ55_01995 IPR042087 DNA polymerase family B, C-terminal domain GJQ55_01995 IPR006172 DNA-directed DNA polymerase, family B GJQ55_02005 IPR005636 DTW GJQ55_02005 IPR039262 DTW domain-containing protein 2 GJQ55_02015 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site GJQ55_02015 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial GJQ55_02015 IPR005791 Protein translocase subunit SecD GJQ55_02015 IPR022645 Protein-export membrane protein SecD/SecF, bacterial GJQ55_02020 IPR004481 Sodium/potassium/calcium exchanger GJQ55_02020 IPR004837 Sodium/calcium exchanger membrane region GJQ55_02040 IPR029045 ClpP/crotonase-like domain superfamily GJQ55_02040 IPR001478 PDZ domain GJQ55_02040 IPR036034 PDZ superfamily GJQ55_02040 IPR004447 C-terminal-processing peptidase S41A GJQ55_02040 IPR005151 Tail specific protease GJQ55_02045 IPR011055 Duplicated hybrid motif GJQ55_02045 IPR011055 Duplicated hybrid motif GJQ55_02045 IPR016047 Peptidase M23 GJQ55_02045 IPR016047 Peptidase M23 GJQ55_02050 IPR006124 Metalloenzyme GJQ55_02050 IPR017850 Alkaline-phosphatase-like, core domain superfamily GJQ55_02050 IPR011258 BPG-independent PGAM, N-terminal GJQ55_02050 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GJQ55_02050 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GJQ55_02055 IPR036873 Rhodanese-like domain superfamily GJQ55_02055 IPR001763 Rhodanese-like domain GJQ55_02060 IPR035958 SecB-like superfamily GJQ55_02060 IPR003708 Bacterial protein export chaperone SecB GJQ55_02065 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GJQ55_02065 IPR012938 Glucose/Sorbosone dehydrogenase GJQ55_02065 IPR011042 Six-bladed beta-propeller, TolB-like GJQ55_02070 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal GJQ55_02070 IPR029028 Alpha/beta knot methyltransferases GJQ55_02070 IPR001537 tRNA/rRNA methyltransferase, SpoU type GJQ55_02070 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GJQ55_02080 IPR003593 AAA+ ATPase domain GJQ55_02080 IPR011006 CheY-like superfamily GJQ55_02080 IPR009057 Homeobox-like domain superfamily GJQ55_02080 IPR002197 DNA binding HTH domain, Fis-type GJQ55_02080 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_02080 IPR002078 RNA polymerase sigma factor 54 interaction domain GJQ55_02080 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 GJQ55_02080 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 GJQ55_02080 IPR025944 Sigma-54 interaction domain, conserved site GJQ55_02080 IPR010114 DNA-binding transcriptional regulator NtrC GJQ55_02080 IPR001789 Signal transduction response regulator, receiver domain GJQ55_02085 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GJQ55_02085 IPR013767 PAS fold GJQ55_02085 IPR035965 PAS domain superfamily GJQ55_02085 IPR000014 PAS domain GJQ55_02085 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GJQ55_02085 IPR005467 Histidine kinase domain GJQ55_02085 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GJQ55_02085 IPR003594 Histidine kinase/HSP90-like ATPase GJQ55_02085 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GJQ55_02095 IPR007360 Invasion gene expression up-regulator, SirB GJQ55_02100 IPR000727 Target SNARE coiled-coil homology domain GJQ55_02100 IPR004090 Chemotaxis methyl-accepting receptor GJQ55_02100 IPR033479 Double Cache domain 1 GJQ55_02100 IPR003660 HAMP domain GJQ55_02100 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GJQ55_02100 IPR029151 Periplasmic sensor-like domain superfamily GJQ55_02110 IPR001727 Gdt1 family GJQ55_02130 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GJQ55_02135 IPR005527 Cell division topological specificity factor MinE GJQ55_02135 IPR036707 Cell division topological specificity factor MinE superfamily GJQ55_02140 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain GJQ55_02140 IPR010223 ATP binding protein MinD, bacterial-type GJQ55_02140 IPR025501 ATP binding protein MinD GJQ55_02140 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_02145 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GJQ55_02145 IPR013033 Septum formation inhibitor MinC GJQ55_02145 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily GJQ55_02145 IPR007874 Septum formation inhibitor MinC, N-terminal GJQ55_02145 IPR038061 MinC, Proteobacteria, N-terminal domain superfamily GJQ55_02145 IPR005526 Septum formation inhibitor MinC, C-terminal GJQ55_02155 IPR022880 DNA polymerase IV GJQ55_02155 IPR017961 DNA polymerase, Y-family, little finger domain GJQ55_02155 IPR024728 DNA polymerase type-Y, HhH motif GJQ55_02155 IPR001126 UmuC domain GJQ55_02155 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GJQ55_02160 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase GJQ55_02160 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily GJQ55_02165 IPR001296 Glycosyl transferase, family 1 GJQ55_02165 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain GJQ55_02170 IPR020449 Transcription regulator HTH, AraC- type GJQ55_02170 IPR009057 Homeobox-like domain superfamily GJQ55_02170 IPR018060 DNA binding HTH domain, AraC-type GJQ55_02170 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal GJQ55_02210 IPR006076 FAD dependent oxidoreductase GJQ55_02210 IPR036188 FAD/NAD(P)-binding domain superfamily GJQ55_02210 IPR030862 L-2-hydroxyglutarate dehydrogenase GJQ55_02215 IPR038404 TRAP transporter solute receptor DctP superfamily GJQ55_02240 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain GJQ55_02240 IPR001296 Glycosyl transferase, family 1 GJQ55_02240 IPR017814 Mycothiol biosynthesis protein, MshA GJQ55_02245 IPR034718 Endolytic peptidoglycan transglycosylase RlpA GJQ55_02245 IPR009009 RlpA-like protein, double-psi beta-barrel domain GJQ55_02245 IPR012997 Rare lipoprotein A GJQ55_02245 IPR007730 Sporulation-like domain GJQ55_02245 IPR036680 Sporulation-like domain superfamily GJQ55_02245 IPR036908 RlpA-like domain superfamily GJQ55_02250 IPR023346 Lysozyme-like domain superfamily GJQ55_02250 IPR011757 Lytic transglycosylase MltB GJQ55_02250 IPR031304 Transglycosylase SLT domain 2 GJQ55_02255 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GJQ55_02255 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GJQ55_02255 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GJQ55_02260 IPR017790 Penicillin-binding protein 2 GJQ55_02260 IPR005311 Penicillin-binding protein, dimerisation domain GJQ55_02260 IPR012338 Beta-lactamase/transpeptidase-like GJQ55_02260 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GJQ55_02260 IPR001460 Penicillin-binding protein, transpeptidase GJQ55_02265 IPR029028 Alpha/beta knot methyltransferases GJQ55_02265 IPR003742 RNA methyltransferase RlmH GJQ55_02265 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal GJQ55_02270 IPR004394 Protein Iojap/ribosomal silencing factor RsfS GJQ55_02275 IPR004821 Cytidyltransferase-like domain GJQ55_02275 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GJQ55_02275 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold GJQ55_02280 IPR000965 GPR domain GJQ55_02280 IPR016161 Aldehyde/histidinol dehydrogenase GJQ55_02280 IPR016162 Aldehyde dehydrogenase, N-terminal GJQ55_02280 IPR015590 Aldehyde dehydrogenase domain GJQ55_02280 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GJQ55_02280 IPR016163 Aldehyde dehydrogenase, C-terminal GJQ55_02280 IPR012134 Glutamate-5-semialdehyde dehydrogenase GJQ55_02290 IPR035965 PAS domain superfamily GJQ55_02290 IPR000014 PAS domain GJQ55_02290 IPR035919 EAL domain superfamily GJQ55_02290 IPR029787 Nucleotide cyclase GJQ55_02290 IPR000160 GGDEF domain GJQ55_02290 IPR001633 EAL domain GJQ55_02290 IPR005330 MHYT domain GJQ55_02310 IPR023006 Uncharacterised protein family UPF0225 GJQ55_02310 IPR004027 SEC-C motif GJQ55_02310 IPR032710 NTF2-like domain superfamily GJQ55_02325 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GJQ55_02325 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GJQ55_02325 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GJQ55_02325 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GJQ55_02325 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GJQ55_02325 IPR012338 Beta-lactamase/transpeptidase-like GJQ55_02330 IPR027471 YbeD-like domain superfamily GJQ55_02330 IPR007454 Uncharacterised protein family UPF0250 GJQ55_02335 IPR020605 Octanoyltransferase, conserved site GJQ55_02335 IPR000544 Octanoyltransferase GJQ55_02335 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GJQ55_02340 IPR007197 Radical SAM GJQ55_02340 IPR003698 Lipoyl synthase GJQ55_02340 IPR031691 Lipoyl synthase, N-terminal GJQ55_02340 IPR006638 Elp3/MiaB/NifB GJQ55_02340 IPR013785 Aldolase-type TIM barrel GJQ55_02350 IPR013766 Thioredoxin domain GJQ55_02350 IPR017937 Thioredoxin, conserved site GJQ55_02350 IPR005746 Thioredoxin GJQ55_02350 IPR036249 Thioredoxin-like superfamily GJQ55_02360 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GJQ55_02360 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GJQ55_02360 IPR006359 Transcription elongation factor GreA GJQ55_02360 IPR028624 Transcription elongation factor GreA/GreB GJQ55_02360 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GJQ55_02360 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GJQ55_02360 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GJQ55_02360 IPR023459 Transcription elongation factor GreA/GreB family GJQ55_02365 IPR013766 Thioredoxin domain GJQ55_02365 IPR035671 DsbD gamma GJQ55_02365 IPR036249 Thioredoxin-like superfamily GJQ55_02365 IPR022910 Thiol:disulphide interchange protein DsbD GJQ55_02365 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GJQ55_02365 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain GJQ55_02365 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily GJQ55_02370 IPR008949 Isoprenoid synthase domain superfamily GJQ55_02370 IPR000092 Polyprenyl synthetase GJQ55_02370 IPR033749 Polyprenyl synthetase, conserved site GJQ55_02375 IPR036164 L21-like superfamily GJQ55_02375 IPR028909 Ribosomal protein L21-like GJQ55_02375 IPR001787 Ribosomal protein L21 GJQ55_02375 IPR018258 Ribosomal protein L21, conserved site GJQ55_02380 IPR001684 Ribosomal protein L27 GJQ55_02380 IPR018261 Ribosomal protein L27, conserved site GJQ55_02385 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_02385 IPR036726 GTP1/OBG domain superfamily GJQ55_02385 IPR006073 GTP binding domain GJQ55_02385 IPR006169 GTP1/OBG domain GJQ55_02385 IPR014100 GTP-binding protein Obg/CgtA GJQ55_02385 IPR035101 GTP-binding protein, Obg-type GJQ55_02385 IPR031167 OBG-type guanine nucleotide-binding (G) domain GJQ55_02385 IPR006074 GTP1/OBG, conserved site GJQ55_02390 IPR036974 PUA domain superfamily GJQ55_02390 IPR015947 PUA-like superfamily GJQ55_02390 IPR002478 PUA domain GJQ55_02390 IPR019797 Glutamate 5-kinase, conserved site GJQ55_02390 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GJQ55_02390 IPR011529 Glutamate 5-kinase GJQ55_02390 IPR041739 Glutamate-5-kinase domain GJQ55_02390 IPR001048 Aspartate/glutamate/uridylate kinase GJQ55_02390 IPR036393 Acetylglutamate kinase-like superfamily GJQ55_02390 IPR001057 Glutamate/acetylglutamate kinase GJQ55_02395 IPR013785 Aldolase-type TIM barrel GJQ55_02395 IPR006218 DAHP synthetase I/KDSA GJQ55_02395 IPR006269 3-deoxy-8-phosphooctulonate synthase GJQ55_02400 IPR036510 Ribosomal protein S20 superfamily GJQ55_02400 IPR002583 Ribosomal protein S20 GJQ55_02405 IPR004268 Peptidoglycan biosynthesis protein MurJ GJQ55_02410 IPR015864 FAD synthetase GJQ55_02410 IPR002606 Riboflavin kinase, bacterial GJQ55_02410 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GJQ55_02410 IPR023465 Riboflavin kinase domain superfamily GJQ55_02410 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold GJQ55_02410 IPR023468 Riboflavin kinase GJQ55_02415 IPR010663 Zinc finger, FPG/IleRS-type GJQ55_02415 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GJQ55_02415 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold GJQ55_02415 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GJQ55_02415 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GJQ55_02415 IPR002301 Isoleucine-tRNA ligase GJQ55_02415 IPR033708 Isoleucyl tRNA synthetase type 1, anticodon-binding domain GJQ55_02415 IPR002300 Aminoacyl-tRNA synthetase, class Ia GJQ55_02415 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GJQ55_02415 IPR023585 Isoleucine-tRNA ligase, type 1 GJQ55_02420 IPR001872 Peptidase A8, signal peptidase II GJQ55_02425 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GJQ55_02430 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GJQ55_02455 IPR008707 PilC beta-propeller domain GJQ55_02455 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily GJQ55_02465 IPR012902 Prokaryotic N-terminal methylation site GJQ55_02465 IPR028188 Type IV pilin PilA GJQ55_02470 IPR001789 Signal transduction response regulator, receiver domain GJQ55_02470 IPR025944 Sigma-54 interaction domain, conserved site GJQ55_02470 IPR002078 RNA polymerase sigma factor 54 interaction domain GJQ55_02470 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_02470 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 GJQ55_02470 IPR002197 DNA binding HTH domain, Fis-type GJQ55_02470 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 GJQ55_02470 IPR011006 CheY-like superfamily GJQ55_02470 IPR003593 AAA+ ATPase domain GJQ55_02470 IPR009057 Homeobox-like domain superfamily GJQ55_02475 IPR003594 Histidine kinase/HSP90-like ATPase GJQ55_02475 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GJQ55_02475 IPR005467 Histidine kinase domain GJQ55_02475 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GJQ55_02475 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GJQ55_02475 IPR000014 PAS domain GJQ55_02475 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GJQ55_02480 IPR003010 Carbon-nitrogen hydrolase GJQ55_02480 IPR036526 Carbon-nitrogen hydrolase superfamily GJQ55_02480 IPR014445 Glutamine-dependent NAD(+) synthetase GJQ55_02480 IPR022310 NAD/GMP synthase GJQ55_02480 IPR003694 NAD(+) synthetase GJQ55_02480 IPR000132 Nitrilase/cyanide hydratase, conserved site GJQ55_02480 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold GJQ55_02485 IPR017689 Outer membrane protein assembly factor BamD GJQ55_02485 IPR039565 Outer membrane lipoprotein BamD-like GJQ55_02485 IPR011990 Tetratricopeptide-like helical domain superfamily GJQ55_02490 IPR020103 Pseudouridine synthase, catalytic domain superfamily GJQ55_02490 IPR006225 Pseudouridine synthase, RluC/RluD GJQ55_02490 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GJQ55_02490 IPR006145 Pseudouridine synthase, RsuA/RluA GJQ55_02490 IPR002942 RNA-binding S4 domain GJQ55_02490 IPR036986 RNA-binding S4 domain superfamily GJQ55_02495 IPR003730 Multi-copper polyphenol oxidoreductase GJQ55_02495 IPR038371 Multi-copper polyphenol oxidoreductase superfamily GJQ55_02495 IPR011324 Cytotoxic necrotizing factor-like, catalytic GJQ55_02505 IPR012846 Acetolactate synthase, large subunit, biosynthetic GJQ55_02505 IPR039368 Acetolactate synthase large subunit, TPP binding domain GJQ55_02505 IPR029035 DHS-like NAD/FAD-binding domain superfamily GJQ55_02505 IPR029061 Thiamin diphosphate-binding fold GJQ55_02505 IPR012000 Thiamine pyrophosphate enzyme, central domain GJQ55_02505 IPR000399 TPP-binding enzyme, conserved site GJQ55_02505 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GJQ55_02505 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GJQ55_02510 IPR004789 Acetolactate synthase, small subunit GJQ55_02510 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal GJQ55_02510 IPR019455 Acetolactate synthase, small subunit, C-terminal GJQ55_02510 IPR002912 ACT domain GJQ55_02510 IPR039557 AHAS, ACT domain GJQ55_02515 IPR000352 Peptide chain release factor class I GJQ55_02520 IPR004254 AdipoR/Haemolysin-III-related GJQ55_02520 IPR005744 Hly-III GJQ55_02525 IPR000305 GIY-YIG endonuclease GJQ55_02525 IPR035901 GIY-YIG endonuclease superfamily GJQ55_02525 IPR022992 Uncharacterised protein family UPF0213, GIY-YIG endonuclease GJQ55_02545 IPR013356 Type II secretion system GspD GJQ55_02545 IPR004845 Type II secretion system GspD, conserved site GJQ55_02545 IPR038591 NolW-like superfamily GJQ55_02545 IPR004846 Type II/III secretion system GJQ55_02545 IPR001775 GspD/PilQ family GJQ55_02545 IPR005644 NolW-like GJQ55_02550 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein GJQ55_02550 IPR029001 Inosine triphosphate pyrophosphatase-like GJQ55_02555 IPR001189 Manganese/iron superoxide dismutase GJQ55_02555 IPR019833 Manganese/iron superoxide dismutase, binding site GJQ55_02555 IPR019832 Manganese/iron superoxide dismutase, C-terminal GJQ55_02555 IPR019831 Manganese/iron superoxide dismutase, N-terminal GJQ55_02555 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily GJQ55_02555 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily GJQ55_02585 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GJQ55_02585 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GJQ55_02585 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GJQ55_02585 IPR011167 Iron-dependent fumarate hydratase GJQ55_02585 IPR020557 Fumarate lyase, conserved site GJQ55_02590 IPR021826 Domain of unknown function DUF3412 GJQ55_02590 IPR037153 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH-like superfamily GJQ55_02590 IPR027820 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH, N-terminal GJQ55_02590 IPR031100 LOG family GJQ55_02595 IPR000644 CBS domain GJQ55_02595 IPR006668 Magnesium transporter, MgtE intracellular domain GJQ55_02595 IPR038076 MgtE, N-terminal domain superfamily GJQ55_02595 IPR038048 Magnesium transporter MgtE, transmembrane domain GJQ55_02595 IPR006669 Magnesium transporter MgtE GJQ55_02595 IPR006667 SLC41 divalent cation transporters, integral membrane domain GJQ55_02595 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GJQ55_02600 IPR024041 Ammonium transporter AmtB-like domain GJQ55_02600 IPR018047 Ammonium transporter, conserved site GJQ55_02600 IPR001905 Ammonium transporter GJQ55_02600 IPR029020 Ammonium/urea transporter GJQ55_02610 IPR002912 ACT domain GJQ55_02610 IPR041729 Formyltetrahydrofolate deformylase, C-terminal hydrolase domain GJQ55_02610 IPR002376 Formyl transferase, N-terminal GJQ55_02610 IPR036477 Formyl transferase, N-terminal domain superfamily GJQ55_02610 IPR004810 Formyltetrahydrofolate deformylase GJQ55_02615 IPR020616 Thiolase, N-terminal GJQ55_02615 IPR020613 Thiolase, conserved site GJQ55_02615 IPR002155 Thiolase GJQ55_02615 IPR020610 Thiolase, active site GJQ55_02615 IPR020615 Thiolase, acyl-enzyme intermediate active site GJQ55_02615 IPR016039 Thiolase-like GJQ55_02615 IPR020617 Thiolase, C-terminal GJQ55_02625 IPR010752 Protein of unknown function DUF1329 GJQ55_02635 IPR002575 Aminoglycoside phosphotransferase GJQ55_02635 IPR011009 Protein kinase-like domain superfamily GJQ55_02635 IPR032882 SrkA/RdoA protein kinase GJQ55_02640 IPR005222 Competence protein ComF GJQ55_02640 IPR000836 Phosphoribosyltransferase domain GJQ55_02640 IPR029057 Phosphoribosyltransferase-like GJQ55_02645 IPR024177 Biotin synthase GJQ55_02645 IPR007197 Radical SAM GJQ55_02645 IPR010722 Biotin and thiamin synthesis-associated domain GJQ55_02645 IPR013785 Aldolase-type TIM barrel GJQ55_02645 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GJQ55_02645 IPR006638 Elp3/MiaB/NifB GJQ55_02660 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain GJQ55_02660 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GJQ55_02660 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GJQ55_02660 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GJQ55_02660 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GJQ55_02660 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GJQ55_02660 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GJQ55_02665 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GJQ55_02665 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GJQ55_02665 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GJQ55_02665 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GJQ55_02665 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GJQ55_02665 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain GJQ55_02665 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GJQ55_02685 IPR005801 ADC synthase GJQ55_02685 IPR019999 Anthranilate synthase component I-like GJQ55_02685 IPR006805 Anthranilate synthase component I, N-terminal GJQ55_02685 IPR005256 Anthranilate synthase component I, PabB-like GJQ55_02685 IPR015890 Chorismate-utilising enzyme, C-terminal GJQ55_02690 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GJQ55_02690 IPR017926 Glutamine amidotransferase GJQ55_02690 IPR029062 Class I glutamine amidotransferase-like GJQ55_02695 IPR005940 Anthranilate phosphoribosyl transferase GJQ55_02695 IPR000312 Glycosyl transferase, family 3 GJQ55_02695 IPR017459 Glycosyl transferase family 3, N-terminal domain GJQ55_02695 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily GJQ55_02695 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily GJQ55_02700 IPR013785 Aldolase-type TIM barrel GJQ55_02700 IPR013798 Indole-3-glycerol phosphate synthase GJQ55_02700 IPR011060 Ribulose-phosphate binding barrel GJQ55_02700 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GJQ55_02710 IPR013785 Aldolase-type TIM barrel GJQ55_02710 IPR026019 Ribulose-phosphate 3-epimerase GJQ55_02710 IPR000056 Ribulose-phosphate 3-epimerase-like GJQ55_02710 IPR011060 Ribulose-phosphate binding barrel GJQ55_02715 IPR036412 HAD-like superfamily GJQ55_02715 IPR006439 HAD hydrolase, subfamily IA GJQ55_02715 IPR041492 Haloacid dehalogenase-like hydrolase GJQ55_02715 IPR023214 HAD superfamily GJQ55_02715 IPR023198 Phosphoglycolate phosphatase-like, domain 2 GJQ55_02715 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic GJQ55_02715 IPR037512 Phosphoglycolate phosphatase, prokaryotic GJQ55_02720 IPR001789 Signal transduction response regulator, receiver domain GJQ55_02720 IPR037522 HD-GYP domain GJQ55_02720 IPR021800 Domain of unknown function DUF3369 GJQ55_02720 IPR011006 CheY-like superfamily GJQ55_02720 IPR003607 HD/PDEase domain GJQ55_02725 IPR018488 Cyclic nucleotide-binding, conserved site GJQ55_02725 IPR000595 Cyclic nucleotide-binding domain GJQ55_02725 IPR012318 Crp-type HTH domain GJQ55_02725 IPR014710 RmlC-like jelly roll fold GJQ55_02725 IPR018335 Transcription regulator HTH, Crp-type, conserved site GJQ55_02725 IPR036388 Winged helix-like DNA-binding domain superfamily GJQ55_02725 IPR036390 Winged helix DNA-binding domain superfamily GJQ55_02725 IPR018490 Cyclic nucleotide-binding-like GJQ55_02730 IPR015946 K homology domain-like, alpha/beta GJQ55_02730 IPR003718 OsmC/Ohr family GJQ55_02730 IPR036102 OsmC/Ohr superfamily GJQ55_02735 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic GJQ55_02735 IPR009165 S-adenosylmethionine decarboxylase, bacterial GJQ55_02735 IPR016067 S-adenosylmethionine decarboxylase, core GJQ55_02750 IPR007848 Methyltransferase small domain GJQ55_02750 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase GJQ55_02750 IPR023543 rRNA small subunit methyltransferase C GJQ55_02750 IPR013675 Methyltransferase small, N-terminal GJQ55_02750 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GJQ55_02755 IPR000551 MerR-type HTH domain GJQ55_02755 IPR009061 Putative DNA-binding domain superfamily GJQ55_02760 IPR036513 STAS domain superfamily GJQ55_02760 IPR002645 STAS domain GJQ55_02760 IPR035965 PAS domain superfamily GJQ55_02760 IPR000700 PAS-associated, C-terminal GJQ55_02760 IPR000014 PAS domain GJQ55_02760 IPR001610 PAC motif GJQ55_02765 IPR008162 Inorganic pyrophosphatase GJQ55_02765 IPR036649 Inorganic pyrophosphatase superfamily GJQ55_02770 IPR039426 Vitamin B12 transporter BtuB-like GJQ55_02770 IPR012910 TonB-dependent receptor, plug domain GJQ55_02770 IPR037066 TonB-dependent receptor, plug domain superfamily GJQ55_02770 IPR000531 TonB-dependent receptor-like, beta-barrel GJQ55_02770 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily GJQ55_02770 IPR010917 TonB-dependent receptor, conserved site GJQ55_02770 IPR010105 TonB-dependent siderophore receptor GJQ55_02780 IPR028343 Fructose-1,6-bisphosphatase GJQ55_02780 IPR000146 Fructose-1,6-bisphosphatase class 1 GJQ55_02780 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal GJQ55_02785 IPR000713 Mur ligase, N-terminal catalytic domain GJQ55_02785 IPR013221 Mur ligase, central GJQ55_02785 IPR036615 Mur ligase, C-terminal domain superfamily GJQ55_02785 IPR036565 Mur-like, catalytic domain superfamily GJQ55_02785 IPR005757 Murein peptide ligase GJQ55_02785 IPR004101 Mur ligase, C-terminal GJQ55_02790 IPR004507 Flavin prenyltransferase UbiX-like GJQ55_02790 IPR036551 Flavin prenyltransferase-like GJQ55_02790 IPR003382 Flavoprotein GJQ55_02805 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GJQ55_02805 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain GJQ55_02805 IPR000727 Target SNARE coiled-coil homology domain GJQ55_02805 IPR004090 Chemotaxis methyl-accepting receptor GJQ55_02805 IPR003660 HAMP domain GJQ55_02825 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_02825 IPR005790 DNA polymerase III, delta subunit GJQ55_02825 IPR010372 DNA polymerase III delta, N-terminal GJQ55_02825 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GJQ55_02825 IPR032780 DNA polymerase III subunit delta, C-terminal GJQ55_02830 IPR007485 LPS-assembly lipoprotein LptE GJQ55_02835 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GJQ55_02835 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GJQ55_02835 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GJQ55_02835 IPR025709 Leucyl-tRNA synthetase, editing domain GJQ55_02835 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold GJQ55_02835 IPR002300 Aminoacyl-tRNA synthetase, class Ia GJQ55_02835 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GJQ55_02835 IPR002302 Leucine-tRNA ligase GJQ55_02845 IPR008040 Hydantoinaseoxoprolinase, N-terminal GJQ55_02845 IPR002821 Hydantoinase A/oxoprolinase GJQ55_02850 IPR000014 PAS domain GJQ55_02850 IPR013655 PAS fold-3 GJQ55_02850 IPR004090 Chemotaxis methyl-accepting receptor GJQ55_02850 IPR003660 HAMP domain GJQ55_02850 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GJQ55_02850 IPR001610 PAC motif GJQ55_02850 IPR035965 PAS domain superfamily GJQ55_02855 IPR036249 Thioredoxin-like superfamily GJQ55_02855 IPR004480 Monothiol glutaredoxin-related GJQ55_02855 IPR033658 Glutaredoxin, PICOT-like GJQ55_02855 IPR002109 Glutaredoxin GJQ55_02855 IPR014434 Monothiol glutaredoxin GJQ55_02860 IPR001789 Signal transduction response regulator, receiver domain GJQ55_02860 IPR011006 CheY-like superfamily GJQ55_02860 IPR016032 Signal transduction response regulator, C-terminal effector GJQ55_02860 IPR000792 Transcription regulator LuxR, C-terminal GJQ55_02865 IPR005119 LysR, substrate-binding GJQ55_02865 IPR036388 Winged helix-like DNA-binding domain superfamily GJQ55_02865 IPR036390 Winged helix DNA-binding domain superfamily GJQ55_02865 IPR000847 Transcription regulator HTH, LysR GJQ55_02885 IPR003333 Mycolic acid cyclopropane synthase GJQ55_02885 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase GJQ55_02900 IPR036291 NAD(P)-binding domain superfamily GJQ55_02900 IPR002347 Short-chain dehydrogenase/reductase SDR GJQ55_02915 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain GJQ55_02915 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily GJQ55_02915 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold GJQ55_02915 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily GJQ55_02915 IPR006050 DNA photolyase, N-terminal GJQ55_02915 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal GJQ55_02915 IPR002081 Cryptochrome/DNA photolyase class 1 GJQ55_02920 IPR009061 Putative DNA-binding domain superfamily GJQ55_02920 IPR000551 MerR-type HTH domain GJQ55_02935 IPR002937 Amine oxidase GJQ55_02935 IPR034721 Bacterial renalase GJQ55_02935 IPR036188 FAD/NAD(P)-binding domain superfamily GJQ55_02940 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GJQ55_02940 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GJQ55_02940 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain GJQ55_02940 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GJQ55_02940 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GJQ55_02940 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GJQ55_02940 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GJQ55_02945 IPR036291 NAD(P)-binding domain superfamily GJQ55_02945 IPR010099 Epimerase family protein SDR39U1 GJQ55_02945 IPR001509 NAD-dependent epimerase/dehydratase GJQ55_02945 IPR013549 Domain of unknown function DUF1731 GJQ55_02955 IPR005950 Molybdate ABC transporter, substrate-binding protein GJQ55_02960 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GJQ55_02960 IPR035906 MetI-like superfamily GJQ55_02960 IPR011867 Molybdate ABC transporter, permease protein GJQ55_02965 IPR005116 Transport-associated OB, type 1 GJQ55_02965 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_02965 IPR004606 Molybdenum-pterin binding GJQ55_02965 IPR011868 Molybdate ABC transporter, ATP-binding protein GJQ55_02965 IPR017871 ABC transporter, conserved site GJQ55_02965 IPR015852 ABC transporter, molybdenum import, ModC GJQ55_02965 IPR003439 ABC transporter-like GJQ55_02965 IPR003593 AAA+ ATPase domain GJQ55_02965 IPR008995 Molybdate/tungstate binding, C-terminal GJQ55_02970 IPR013785 Aldolase-type TIM barrel GJQ55_02970 IPR024188 Glutamate synthase large subunit-like protein GJQ55_02970 IPR002932 Glutamate synthase domain GJQ55_02970 IPR027283 Glutamate synthase large subunit-like protein, bacteria GJQ55_02975 IPR035807 Pyruvate dehydrogenase E1 component, N-terminal GJQ55_02975 IPR004660 Pyruvate dehydrogenase E1 component GJQ55_02975 IPR041621 Pyruvate dehydrogenase E1 component, middle domain GJQ55_02975 IPR029061 Thiamin diphosphate-binding fold GJQ55_02975 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GJQ55_02975 IPR005474 Transketolase, N-terminal GJQ55_02980 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily GJQ55_02980 IPR000089 Biotin/lipoyl attachment GJQ55_02980 IPR011053 Single hybrid motif GJQ55_02980 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GJQ55_02980 IPR004167 Peripheral subunit-binding domain GJQ55_02980 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex GJQ55_02980 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site GJQ55_02980 IPR036625 E3-binding domain superfamily GJQ55_02985 IPR029151 Periplasmic sensor-like domain superfamily GJQ55_02985 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GJQ55_02990 IPR036451 Cobalamin adenosyltransferase-like superfamily GJQ55_02990 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type GJQ55_02990 IPR016030 Cobalamin adenosyltransferase-like GJQ55_03000 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GJQ55_03000 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GJQ55_03000 IPR003710 Ketopantoate reductase ApbA/PanE GJQ55_03000 IPR013752 Ketopantoate reductase, C-terminal domain GJQ55_03000 IPR013332 Ketopantoate reductase, N-terminal domain GJQ55_03000 IPR036291 NAD(P)-binding domain superfamily GJQ55_03005 IPR036183 YajQ-like superfamily GJQ55_03005 IPR007551 Protein of unknown function DUF520 GJQ55_03005 IPR035570 UPF0234, N-terminal GJQ55_03005 IPR035571 UPF0234-like, C-terminal GJQ55_03010 IPR004752 AmpG-like permease/Acetyl-coenzyme A transporter 1 GJQ55_03010 IPR011701 Major facilitator superfamily GJQ55_03010 IPR020846 Major facilitator superfamily domain GJQ55_03010 IPR036259 MFS transporter superfamily GJQ55_03015 IPR000600 ROK family GJQ55_03025 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GJQ55_03025 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_03030 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GJQ55_03030 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GJQ55_03030 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily GJQ55_03030 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GJQ55_03040 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GJQ55_03050 IPR004485 Cobalamin biosynthesis CobD/CbiB GJQ55_03055 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GJQ55_03055 IPR015424 Pyridoxal phosphate-dependent transferase GJQ55_03055 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GJQ55_03055 IPR005860 L-threonine-O-3-phosphate decarboxylase GJQ55_03055 IPR004839 Aminotransferase, class I/classII GJQ55_03055 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GJQ55_03060 IPR023544 ABC transporter, vitamin B12-binding protein GJQ55_03060 IPR002491 ABC transporter periplasmic binding domain GJQ55_03065 IPR036909 Cytochrome c-like domain superfamily GJQ55_03065 IPR009056 Cytochrome c-like domain GJQ55_03080 IPR008331 Ferritin/DPS protein domain GJQ55_03080 IPR009078 Ferritin-like superfamily GJQ55_03080 IPR012347 Ferritin-like GJQ55_03080 IPR023188 DNA-binding protein Dps, conserved site GJQ55_03080 IPR002177 DNA-binding protein Dps GJQ55_03085 IPR003689 Zinc/iron permease GJQ55_03100 IPR008991 Translation protein SH3-like domain superfamily GJQ55_03100 IPR011768 Translation elongation factor P GJQ55_03100 IPR013185 Translation elongation factor, KOW-like GJQ55_03100 IPR020599 Translation elongation factor P/YeiP GJQ55_03100 IPR014722 Ribosomal protein L2, domain 2 GJQ55_03100 IPR012340 Nucleic acid-binding, OB-fold GJQ55_03100 IPR015365 Elongation factor P, C-terminal GJQ55_03100 IPR001059 Translation elongation factor P/YeiP, central GJQ55_03105 IPR029787 Nucleotide cyclase GJQ55_03105 IPR035919 EAL domain superfamily GJQ55_03105 IPR000160 GGDEF domain GJQ55_03105 IPR001633 EAL domain GJQ55_03105 IPR005330 MHYT domain GJQ55_03110 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) GJQ55_03110 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GJQ55_03110 IPR003594 Histidine kinase/HSP90-like ATPase GJQ55_03110 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GJQ55_03110 IPR005467 Histidine kinase domain GJQ55_03110 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GJQ55_03110 IPR029151 Periplasmic sensor-like domain superfamily GJQ55_03110 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GJQ55_03115 IPR029035 DHS-like NAD/FAD-binding domain superfamily GJQ55_03115 IPR026590 Sirtuin family, catalytic core domain GJQ55_03115 IPR027546 Sirtuin, class III GJQ55_03115 IPR026591 Sirtuin, catalytic core small domain superfamily GJQ55_03115 IPR003000 Sirtuin family GJQ55_03120 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GJQ55_03120 IPR029061 Thiamin diphosphate-binding fold GJQ55_03120 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GJQ55_03125 IPR013785 Aldolase-type TIM barrel GJQ55_03125 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GJQ55_03125 IPR000262 FMN-dependent dehydrogenase GJQ55_03125 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site GJQ55_03125 IPR020920 L-lactate dehydrogenase, bacterial GJQ55_03125 IPR037396 FMN hydroxy acid dehydrogenase domain GJQ55_03130 IPR014614 Uncharacterised conserved protein UCP036654 GJQ55_03130 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain GJQ55_03130 IPR036188 FAD/NAD(P)-binding domain superfamily GJQ55_03135 IPR025202 Phospholipase D-like domain GJQ55_03135 IPR030871 Cardiolipin synthase C GJQ55_03135 IPR001736 Phospholipase D/Transphosphatidylase GJQ55_03145 IPR023620 Small protein B GJQ55_03145 IPR000037 SsrA-binding protein GJQ55_03145 IPR020081 SsrA-binding protein, conserved site GJQ55_03150 IPR037272 Sodium:neurotransmitter symporter superfamily GJQ55_03150 IPR000175 Sodium:neurotransmitter symporter GJQ55_03155 IPR005031 Coenzyme Q-binding protein COQ10, START domain GJQ55_03155 IPR023393 START-like domain superfamily GJQ55_03160 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp GJQ55_03160 IPR005346 RnfH protein GJQ55_03160 IPR037021 RnfH superfamily GJQ55_03165 IPR026592 Outer membrane protein assembly factor BamE GJQ55_03165 IPR037873 BamE-like GJQ55_03165 IPR007450 Lipoprotein SmpA/OmlA GJQ55_03170 IPR002481 Ferric-uptake regulator GJQ55_03170 IPR036388 Winged helix-like DNA-binding domain superfamily GJQ55_03170 IPR036390 Winged helix DNA-binding domain superfamily GJQ55_03175 IPR004604 DNA recombination/repair protein RecN GJQ55_03175 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_03175 IPR003395 RecF/RecN/SMC, N-terminal GJQ55_03180 IPR013805 GrpE nucleotide exchange factor, coiled-coil GJQ55_03180 IPR000740 GrpE nucleotide exchange factor GJQ55_03180 IPR009012 GrpE nucleotide exchange factor, head GJQ55_03185 IPR018181 Heat shock protein 70, conserved site GJQ55_03185 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily GJQ55_03185 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily GJQ55_03185 IPR013126 Heat shock protein 70 family GJQ55_03185 IPR012725 Chaperone DnaK GJQ55_03190 IPR012724 Chaperone DnaJ GJQ55_03190 IPR002939 Chaperone DnaJ, C-terminal GJQ55_03190 IPR001623 DnaJ domain GJQ55_03190 IPR018253 DnaJ domain, conserved site GJQ55_03190 IPR008971 HSP40/DnaJ peptide-binding GJQ55_03190 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GJQ55_03190 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily GJQ55_03190 IPR036869 Chaperone J-domain superfamily GJQ55_03195 IPR036291 NAD(P)-binding domain superfamily GJQ55_03195 IPR022664 Dihydrodipicolinate reductase, conserved site GJQ55_03195 IPR000846 Dihydrodipicolinate reductase, N-terminal GJQ55_03195 IPR023940 Dihydrodipicolinate reductase GJQ55_03195 IPR022663 Dihydrodipicolinate reductase, C-terminal GJQ55_03200 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily GJQ55_03200 IPR001647 DNA-binding HTH domain, TetR-type GJQ55_03200 IPR009057 Homeobox-like domain superfamily GJQ55_03205 IPR006274 Carbamoyl-phosphate synthase, small subunit GJQ55_03205 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain GJQ55_03205 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily GJQ55_03205 IPR029062 Class I glutamine amidotransferase-like GJQ55_03205 IPR035686 Carbamoyl-phosphate synthase small subunit, GATase1 domain GJQ55_03205 IPR017926 Glutamine amidotransferase GJQ55_03210 IPR016185 Pre-ATP-grasp domain superfamily GJQ55_03210 IPR033937 Carbamoyl-phosphate synthase large chain, methylglyoxal synthase-like domain GJQ55_03210 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GJQ55_03210 IPR036914 Methylglyoxal synthase-like domain superfamily GJQ55_03210 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily GJQ55_03210 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GJQ55_03210 IPR011761 ATP-grasp fold GJQ55_03210 IPR011607 Methylglyoxal synthase-like domain GJQ55_03210 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain GJQ55_03210 IPR006275 Carbamoyl-phosphate synthase, large subunit GJQ55_03215 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GJQ55_03215 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GJQ55_03215 IPR006359 Transcription elongation factor GreA GJQ55_03215 IPR028624 Transcription elongation factor GreA/GreB GJQ55_03215 IPR023459 Transcription elongation factor GreA/GreB family GJQ55_03215 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GJQ55_03215 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GJQ55_03215 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GJQ55_03220 IPR033120 Hotdog acyl-CoA thioesterase (ACOT)-type domain GJQ55_03220 IPR029069 HotDog domain superfamily GJQ55_03220 IPR006683 Thioesterase domain GJQ55_03220 IPR040170 Cytosolic acyl coenzyme A thioester hydrolase GJQ55_03225 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GJQ55_03225 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ GJQ55_03225 IPR029069 HotDog domain superfamily GJQ55_03230 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GJQ55_03230 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal GJQ55_03230 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GJQ55_03230 IPR016039 Thiolase-like GJQ55_03235 IPR001890 RNA-binding, CRM domain GJQ55_03235 IPR017924 RNA-binding protein YhbY GJQ55_03235 IPR035920 YhbY-like superfamily GJQ55_03240 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase GJQ55_03240 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GJQ55_03240 IPR015507 Ribosomal RNA large subunit methyltransferase E GJQ55_03245 IPR037219 Peptidase M41-like GJQ55_03245 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_03245 IPR000642 Peptidase M41 GJQ55_03245 IPR011546 Peptidase M41, FtsH extracellular GJQ55_03245 IPR005936 Peptidase, FtsH GJQ55_03245 IPR003593 AAA+ ATPase domain GJQ55_03245 IPR003959 ATPase, AAA-type, core GJQ55_03245 IPR041569 AAA ATPase, AAA+ lid domain GJQ55_03245 IPR003960 ATPase, AAA-type, conserved site GJQ55_03250 IPR011005 Dihydropteroate synthase-like GJQ55_03250 IPR006390 Dihydropteroate synthase GJQ55_03250 IPR000489 Pterin-binding domain GJQ55_03255 IPR006352 Phosphoglucosamine mutase, bacterial type GJQ55_03255 IPR005841 Alpha-D-phosphohexomutase superfamily GJQ55_03255 IPR016066 Alpha-D-phosphohexomutase, conserved site GJQ55_03255 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GJQ55_03255 IPR005843 Alpha-D-phosphohexomutase, C-terminal GJQ55_03255 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GJQ55_03255 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GJQ55_03255 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GJQ55_03255 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GJQ55_03260 IPR013785 Aldolase-type TIM barrel GJQ55_03260 IPR035990 Triosephosphate isomerase superfamily GJQ55_03260 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GJQ55_03260 IPR000652 Triosephosphate isomerase GJQ55_03260 IPR020861 Triosephosphate isomerase, active site GJQ55_03265 IPR004692 Preprotein translocase SecG subunit GJQ55_03275 IPR035956 RimP, N-terminal domain superfamily GJQ55_03275 IPR028989 Ribosome maturation factor RimP, N-terminal GJQ55_03275 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily GJQ55_03275 IPR003728 Ribosome maturation factor RimP GJQ55_03275 IPR028998 Ribosome maturation factor RimP, C-terminal GJQ55_03280 IPR010214 Transcription termination factor NusA, C-terminal duplication GJQ55_03280 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GJQ55_03280 IPR015946 K homology domain-like, alpha/beta GJQ55_03280 IPR025249 KH domain, NusA-like GJQ55_03280 IPR009019 K homology domain superfamily, prokaryotic type GJQ55_03280 IPR012340 Nucleic acid-binding, OB-fold GJQ55_03280 IPR030842 Transcription termination/antitermination protein NusA, bacterial GJQ55_03280 IPR036555 NusA, N-terminal domain superfamily GJQ55_03280 IPR022967 RNA-binding domain, S1 GJQ55_03280 IPR003029 S1 domain GJQ55_03280 IPR013735 Transcription factor NusA, N-terminal GJQ55_03280 IPR010213 Transcription termination factor NusA GJQ55_03285 IPR009000 Translation protein, beta-barrel domain superfamily GJQ55_03285 IPR000795 Transcription factor, GTP-binding domain GJQ55_03285 IPR036925 Translation initiation factor IF-2, domain 3 superfamily GJQ55_03285 IPR005225 Small GTP-binding protein domain GJQ55_03285 IPR023115 Translation initiation factor IF- 2, domain 3 GJQ55_03285 IPR006847 Translation initiation factor IF-2, N-terminal GJQ55_03285 IPR013575 Initiation factor 2 associated domain, bacterial GJQ55_03285 IPR009061 Putative DNA-binding domain superfamily GJQ55_03285 IPR000178 Translation initiation factor aIF-2, bacterial-like GJQ55_03285 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_03285 IPR015760 Translation initiation factor IF- 2 GJQ55_03290 IPR020053 Ribosome-binding factor A, conserved site GJQ55_03290 IPR015946 K homology domain-like, alpha/beta GJQ55_03290 IPR000238 Ribosome-binding factor A GJQ55_03290 IPR023799 Ribosome-binding factor A domain superfamily GJQ55_03295 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GJQ55_03295 IPR014780 tRNA pseudouridine synthase II, TruB GJQ55_03295 IPR015947 PUA-like superfamily GJQ55_03295 IPR032819 tRNA pseudouridylate synthase B, C-terminal GJQ55_03295 IPR020103 Pseudouridine synthase, catalytic domain superfamily GJQ55_03295 IPR002501 Pseudouridine synthase II, N-terminal GJQ55_03300 IPR000589 Ribosomal protein S15 GJQ55_03300 IPR005290 Ribosomal protein S15, bacterial-type GJQ55_03300 IPR009068 S15/NS1, RNA-binding GJQ55_03305 IPR003029 S1 domain GJQ55_03305 IPR027408 PNPase/RNase PH domain superfamily GJQ55_03305 IPR022967 RNA-binding domain, S1 GJQ55_03305 IPR020568 Ribosomal protein S5 domain 2-type fold GJQ55_03305 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily GJQ55_03305 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GJQ55_03305 IPR012162 Polyribonucleotide nucleotidyltransferase GJQ55_03305 IPR015847 Exoribonuclease, phosphorolytic domain 2 GJQ55_03305 IPR036612 K Homology domain, type 1 superfamily GJQ55_03305 IPR004088 K Homology domain, type 1 GJQ55_03305 IPR004087 K Homology domain GJQ55_03305 IPR036345 Exoribonuclease, PH domain 2 superfamily GJQ55_03305 IPR001247 Exoribonuclease, phosphorolytic domain 1 GJQ55_03305 IPR012340 Nucleic acid-binding, OB-fold GJQ55_03325 IPR003719 Phenazine biosynthesis PhzF protein GJQ55_03330 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain GJQ55_03330 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like GJQ55_03330 IPR022712 Beta-Casp domain GJQ55_03330 IPR001279 Metallo-beta-lactamase GJQ55_03335 IPR028579 Putative thymidine phosphorylase GJQ55_03335 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GJQ55_03335 IPR013466 Thymidine phosphorylase/AMP phosphorylase GJQ55_03335 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GJQ55_03335 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GJQ55_03335 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GJQ55_03335 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily GJQ55_03335 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily GJQ55_03335 IPR000312 Glycosyl transferase, family 3 GJQ55_03335 IPR017459 Glycosyl transferase family 3, N-terminal domain GJQ55_03350 IPR036188 FAD/NAD(P)-binding domain superfamily GJQ55_03350 IPR020946 Flavin monooxygenase-like GJQ55_03355 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GJQ55_03355 IPR036388 Winged helix-like DNA-binding domain superfamily GJQ55_03355 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain GJQ55_03360 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GJQ55_03360 IPR036291 NAD(P)-binding domain superfamily GJQ55_03360 IPR020904 Short-chain dehydrogenase/reductase, conserved site GJQ55_03360 IPR002347 Short-chain dehydrogenase/reductase SDR GJQ55_03365 IPR003673 CoA-transferase family III GJQ55_03365 IPR023606 CoA-transferase family III domain superfamily GJQ55_03370 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GJQ55_03370 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GJQ55_03370 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GJQ55_03370 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GJQ55_03370 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GJQ55_03370 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GJQ55_03370 IPR006089 Acyl-CoA dehydrogenase, conserved site GJQ55_03375 IPR016039 Thiolase-like GJQ55_03375 IPR020615 Thiolase, acyl-enzyme intermediate active site GJQ55_03375 IPR020610 Thiolase, active site GJQ55_03375 IPR020616 Thiolase, N-terminal GJQ55_03375 IPR020613 Thiolase, conserved site GJQ55_03375 IPR020617 Thiolase, C-terminal GJQ55_03375 IPR002155 Thiolase GJQ55_03380 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GJQ55_03380 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GJQ55_03380 IPR036291 NAD(P)-binding domain superfamily GJQ55_03380 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GJQ55_03380 IPR001753 Enoyl-CoA hydratase/isomerase GJQ55_03380 IPR012802 Fatty oxidation complex, alpha subunit FadJ GJQ55_03380 IPR029045 ClpP/crotonase-like domain superfamily GJQ55_03385 IPR003607 HD/PDEase domain GJQ55_03385 IPR037522 HD-GYP domain GJQ55_03385 IPR001789 Signal transduction response regulator, receiver domain GJQ55_03385 IPR021800 Domain of unknown function DUF3369 GJQ55_03385 IPR011006 CheY-like superfamily GJQ55_03390 IPR033480 Single Cache domain 2 GJQ55_03390 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GJQ55_03390 IPR003660 HAMP domain GJQ55_03390 IPR004090 Chemotaxis methyl-accepting receptor GJQ55_03395 IPR006073 GTP binding domain GJQ55_03395 IPR012675 Beta-grasp domain superfamily GJQ55_03395 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GJQ55_03395 IPR031167 OBG-type guanine nucleotide-binding (G) domain GJQ55_03395 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_03395 IPR004095 TGS GJQ55_03395 IPR012676 TGS-like GJQ55_03395 IPR023192 TGS-like domain superfamily GJQ55_03395 IPR041706 YchF, N-terminal GJQ55_03395 IPR013029 YchF, C-terminal domain GJQ55_03400 IPR018171 Peptidyl-tRNA hydrolase, conserved site GJQ55_03400 IPR036416 Peptidyl-tRNA hydrolase superfamily GJQ55_03400 IPR001328 Peptidyl-tRNA hydrolase GJQ55_03405 IPR037121 Ribosomal protein L25, C-terminal GJQ55_03405 IPR020055 Ribosomal protein L25, short-form GJQ55_03405 IPR001021 Ribosomal protein L25, long-form GJQ55_03405 IPR020057 Ribosomal protein L25, beta domain GJQ55_03405 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GJQ55_03405 IPR029751 Ribosomal protein L25 GJQ55_03405 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal GJQ55_03410 IPR000836 Phosphoribosyltransferase domain GJQ55_03410 IPR029057 Phosphoribosyltransferase-like GJQ55_03410 IPR005946 Ribose-phosphate pyrophosphokinase GJQ55_03410 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type GJQ55_03410 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GJQ55_03410 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain GJQ55_03420 IPR006204 GHMP kinase N-terminal domain GJQ55_03420 IPR013750 GHMP kinase, C-terminal domain GJQ55_03420 IPR036554 GHMP kinase, C-terminal domain superfamily GJQ55_03420 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GJQ55_03420 IPR020568 Ribosomal protein S5 domain 2-type fold GJQ55_03420 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup GJQ55_03425 IPR029046 Lipoprotein localisation LolA/LolB/LppX GJQ55_03425 IPR004565 Outer membrane lipoprotein LolB GJQ55_03430 IPR013026 Tetratricopeptide repeat-containing domain GJQ55_03430 IPR011990 Tetratricopeptide-like helical domain superfamily GJQ55_03430 IPR019734 Tetratricopeptide repeat GJQ55_03435 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GJQ55_03435 IPR036291 NAD(P)-binding domain superfamily GJQ55_03435 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase GJQ55_03435 IPR018214 Glutamyl-tRNA reductase, conserved site GJQ55_03435 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GJQ55_03435 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily GJQ55_03435 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GJQ55_03435 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GJQ55_03440 IPR005139 Peptide chain release factor GJQ55_03440 IPR000352 Peptide chain release factor class I GJQ55_03440 IPR004373 Peptide chain release factor 1 GJQ55_03445 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GJQ55_03445 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase GJQ55_03445 IPR040758 Release factor glutamine methyltransferase, N-terminal domain GJQ55_03445 IPR025714 Methyltransferase domain GJQ55_03445 IPR004556 Methyltransferase HemK-like GJQ55_03445 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GJQ55_03450 IPR036188 FAD/NAD(P)-binding domain superfamily GJQ55_03450 IPR023753 FAD/NAD(P)-binding domain GJQ55_03455 IPR004515 Phosphoheptose isomerase GJQ55_03455 IPR035461 GmhA/DiaA GJQ55_03455 IPR001347 Sugar isomerase (SIS) GJQ55_03460 IPR011335 Restriction endonuclease type II-like GJQ55_03460 IPR011856 tRNA endonuclease-like domain superfamily GJQ55_03460 IPR003509 Uncharacterised protein family UPF0102 GJQ55_03465 IPR007443 Penicillin-binding protein activator LpoA GJQ55_03465 IPR028082 Periplasmic binding protein-like I GJQ55_03465 IPR011990 Tetratricopeptide-like helical domain superfamily GJQ55_03470 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GJQ55_03470 IPR035996 Tetrapyrrole methylase superfamily GJQ55_03470 IPR000878 Tetrapyrrole methylase GJQ55_03470 IPR008189 rRNA small subunit methyltransferase I GJQ55_03470 IPR014776 Tetrapyrrole methylase, subdomain 2 GJQ55_03470 IPR014777 Tetrapyrrole methylase, subdomain 1 GJQ55_03500 IPR008854 TPMT family GJQ55_03500 IPR025835 Thiopurine S-methyltransferase GJQ55_03500 IPR022474 Thiopurine S-methyltransferase, Se/Te detoxification GJQ55_03500 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase GJQ55_03505 IPR023368 Uncharacterised protein family UPF0066, conserved site GJQ55_03505 IPR040372 YaeB-like GJQ55_03505 IPR036413 YaeB-like superfamily GJQ55_03505 IPR036414 YaeB, N-terminal domain superfamily GJQ55_03505 IPR023370 TrmO-like, N-terminal domain GJQ55_03505 IPR041369 TrmO, C-terminal GJQ55_03510 IPR042117 OMPP1/FadL/TodX superfamily GJQ55_03510 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) GJQ55_03570 IPR002898 MotA/TolQ/ExbB proton channel GJQ55_03575 IPR002898 MotA/TolQ/ExbB proton channel GJQ55_03580 IPR003400 Biopolymer transport protein ExbD/TolR GJQ55_03585 IPR037682 TonB, C-terminal GJQ55_03585 IPR006260 TonB/TolA, C-terminal GJQ55_03585 IPR003538 Gram-negative bacterial TonB protein GJQ55_03600 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GJQ55_03605 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GJQ55_03605 IPR041728 GPAT/DHAPAT, acyltransferase domain GJQ55_03605 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GJQ55_03605 IPR002123 Phospholipid/glycerol acyltransferase GJQ55_03610 IPR007236 SlyX GJQ55_03615 IPR012340 Nucleic acid-binding, OB-fold GJQ55_03615 IPR002059 Cold-shock protein, DNA-binding GJQ55_03615 IPR019844 Cold-shock (CSD) domain GJQ55_03615 IPR011129 Cold shock domain GJQ55_03615 IPR012156 Cold shock, CspA GJQ55_03620 IPR033942 Inositol monophosphatase GJQ55_03620 IPR020583 Inositol monophosphatase, metal-binding site GJQ55_03620 IPR000760 Inositol monophosphatase-like GJQ55_03620 IPR020550 Inositol monophosphatase, conserved site GJQ55_03620 IPR022337 Inositol monophosphatase, SuhB GJQ55_03625 IPR001537 tRNA/rRNA methyltransferase, SpoU type GJQ55_03625 IPR029028 Alpha/beta knot methyltransferases GJQ55_03625 IPR004384 RNA methyltransferase TrmJ/LasT GJQ55_03625 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal GJQ55_03630 IPR018357 Hexapeptide transferase, conserved site GJQ55_03630 IPR042122 Serine acetyltransferase, N-terminal domain superfamily GJQ55_03630 IPR005881 Serine O-acetyltransferase GJQ55_03630 IPR011004 Trimeric LpxA-like superfamily GJQ55_03630 IPR001451 Hexapeptide repeat GJQ55_03635 IPR036390 Winged helix DNA-binding domain superfamily GJQ55_03635 IPR036388 Winged helix-like DNA-binding domain superfamily GJQ55_03635 IPR000944 Transcription regulator Rrf2-type GJQ55_03635 IPR030489 Transcription regulator Rrf2-type, conserved site GJQ55_03635 IPR010242 Transcription factor HTH, IscR GJQ55_03640 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GJQ55_03640 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GJQ55_03640 IPR015424 Pyridoxal phosphate-dependent transferase GJQ55_03640 IPR000192 Aminotransferase class V domain GJQ55_03640 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site GJQ55_03640 IPR010240 Cysteine desulfurase IscS GJQ55_03640 IPR016454 Cysteine desulfurase GJQ55_03645 IPR036850 Nucleoside diphosphate kinase-like domain superfamily GJQ55_03645 IPR034907 Nucleoside diphosphate kinase-like domain GJQ55_03645 IPR001564 Nucleoside diphosphate kinase GJQ55_03650 IPR013785 Aldolase-type TIM barrel GJQ55_03650 IPR040072 Methyltransferase (Class A) GJQ55_03650 IPR027492 Dual-specificity RNA methyltransferase RlmN GJQ55_03650 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GJQ55_03650 IPR007197 Radical SAM GJQ55_03660 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GJQ55_03660 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GJQ55_03660 IPR011005 Dihydropteroate synthase-like GJQ55_03665 IPR006195 Aminoacyl-tRNA synthetase, class II GJQ55_03665 IPR004154 Anticodon-binding GJQ55_03665 IPR036621 Anticodon-binding domain superfamily GJQ55_03665 IPR015807 Histidine-tRNA ligase GJQ55_03665 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain GJQ55_03665 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GJQ55_03665 IPR033656 Histidyl-anticodon-binding GJQ55_03670 IPR026039 Uncharacterised protein family UPF0070 GJQ55_03670 IPR018704 Tetratricopeptide repeat-like domain GJQ55_03670 IPR011990 Tetratricopeptide-like helical domain superfamily GJQ55_03675 IPR002372 Pyrrolo-quinoline quinone repeat GJQ55_03675 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GJQ55_03675 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily GJQ55_03675 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat GJQ55_03675 IPR017687 Outer membrane protein assembly factor BamB GJQ55_03680 IPR032859 GTPase Der, C-terminal KH-domain-like GJQ55_03680 IPR005225 Small GTP-binding protein domain GJQ55_03680 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_03680 IPR015946 K homology domain-like, alpha/beta GJQ55_03680 IPR006073 GTP binding domain GJQ55_03680 IPR031166 EngA-type guanine nucleotide-binding (G) domain GJQ55_03680 IPR016484 GTP-binding protein EngA GJQ55_03685 IPR004090 Chemotaxis methyl-accepting receptor GJQ55_03685 IPR003660 HAMP domain GJQ55_03685 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GJQ55_03685 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain GJQ55_03685 IPR000727 Target SNARE coiled-coil homology domain GJQ55_03695 IPR029045 ClpP/crotonase-like domain superfamily GJQ55_03695 IPR001753 Enoyl-CoA hydratase/isomerase GJQ55_03695 IPR014748 Enoyl-CoA hydratase, C-terminal GJQ55_03695 IPR011968 Phenylacetate degradation probable enoyl-CoA hydratase PaaB GJQ55_03700 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GJQ55_03700 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GJQ55_03700 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GJQ55_03700 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GJQ55_03700 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GJQ55_03700 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain GJQ55_03700 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GJQ55_03705 IPR023609 Transcription regulator HTH, RhaS GJQ55_03705 IPR003313 AraC-type arabinose-binding/dimerisation domain GJQ55_03705 IPR037923 Transcription regulator HTH-like GJQ55_03705 IPR018060 DNA binding HTH domain, AraC-type GJQ55_03705 IPR018062 HTH domain AraC-type, conserved site GJQ55_03705 IPR014710 RmlC-like jelly roll fold GJQ55_03705 IPR020449 Transcription regulator HTH, AraC- type GJQ55_03705 IPR009057 Homeobox-like domain superfamily GJQ55_03710 IPR007401 Protein of unknown function DUF454 GJQ55_03715 IPR029058 Alpha/Beta hydrolase fold GJQ55_03715 IPR000073 Alpha/beta hydrolase fold-1 GJQ55_03715 IPR000639 Epoxide hydrolase-like GJQ55_03725 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_03725 IPR011924 Lipoprotein releasing system, ATP-binding protein GJQ55_03725 IPR015854 ABC transporter, lipoprotein release, LolD GJQ55_03725 IPR017871 ABC transporter, conserved site GJQ55_03725 IPR003439 ABC transporter-like GJQ55_03725 IPR003593 AAA+ ATPase domain GJQ55_03730 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GJQ55_03730 IPR011276 TonB-dependent haem/haemoglobin receptor GJQ55_03730 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily GJQ55_03730 IPR010916 TonB box, conserved site GJQ55_03730 IPR037066 TonB-dependent receptor, plug domain superfamily GJQ55_03730 IPR000531 TonB-dependent receptor-like, beta-barrel GJQ55_03730 IPR012910 TonB-dependent receptor, plug domain GJQ55_03730 IPR039426 Vitamin B12 transporter BtuB-like GJQ55_03750 IPR023504 Bacteriohemerythrin-like protein GJQ55_03750 IPR012312 Haemerythrin-like GJQ55_03750 IPR012827 Haemerythrin, metal-binding domain GJQ55_03750 IPR035938 Hemerythrin-like superfamily GJQ55_03750 IPR016131 Haemerythrin, iron-binding site GJQ55_03755 IPR031312 Sodium/sulphate symporter, conserved site GJQ55_03755 IPR001898 Solute carrier family 13 GJQ55_03760 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GJQ55_03760 IPR002547 tRNA-binding domain GJQ55_03760 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold GJQ55_03760 IPR012340 Nucleic acid-binding, OB-fold GJQ55_03760 IPR033911 Methioninyl-tRNA synthetase core domain GJQ55_03760 IPR015413 Methionyl/Leucyl tRNA synthetase GJQ55_03760 IPR029038 Methionyl-tRNA synthetase, Zn-domain GJQ55_03760 IPR023458 Methionine-tRNA ligase, type 1 GJQ55_03760 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GJQ55_03760 IPR041872 Methionyl-tRNA synthetase, anticodon-binding domain GJQ55_03760 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GJQ55_03760 IPR014758 Methionyl-tRNA synthetase GJQ55_03765 IPR000644 CBS domain GJQ55_03765 IPR002550 CNNM, transmembrane domain GJQ55_03765 IPR036318 FAD-binding, type PCMH-like superfamily GJQ55_03765 IPR016169 FAD-binding, type PCMH, subdomain 2 GJQ55_03765 IPR005170 Transporter-associated domain GJQ55_03775 IPR004780 Signal recognition particle protein GJQ55_03775 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GJQ55_03775 IPR022941 Signal recognition particle, SRP54 subunit GJQ55_03775 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GJQ55_03775 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily GJQ55_03775 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GJQ55_03775 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_03775 IPR003593 AAA+ ATPase domain GJQ55_03775 IPR013822 Signal recognition particle SRP54, helical bundle GJQ55_03780 IPR005134 Uncharacterised protein family UPF0114 GJQ55_03780 IPR020761 Uncharacterised protein family UPF0114, bacteria GJQ55_03785 IPR021134 Bestrophin/UPF0187 GJQ55_03795 IPR013785 Aldolase-type TIM barrel GJQ55_03795 IPR036188 FAD/NAD(P)-binding domain superfamily GJQ55_03795 IPR023753 FAD/NAD(P)-binding domain GJQ55_03795 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GJQ55_03805 IPR004450 Threonine synthase-like GJQ55_03805 IPR037158 Threonine synthase, N-terminal domain superfamily GJQ55_03805 IPR029144 Threonine synthase, N-terminal GJQ55_03805 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme GJQ55_03805 IPR001926 Pyridoxal-phosphate dependent enzyme GJQ55_03805 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GJQ55_03815 IPR002024 Bacterioferritin GJQ55_03815 IPR012347 Ferritin-like GJQ55_03815 IPR009040 Ferritin-like diiron domain GJQ55_03815 IPR009078 Ferritin-like superfamily GJQ55_03815 IPR008331 Ferritin/DPS protein domain GJQ55_03820 IPR008331 Ferritin/DPS protein domain GJQ55_03820 IPR002024 Bacterioferritin GJQ55_03820 IPR009078 Ferritin-like superfamily GJQ55_03820 IPR009040 Ferritin-like diiron domain GJQ55_03820 IPR012347 Ferritin-like GJQ55_03840 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GJQ55_03840 IPR036291 NAD(P)-binding domain superfamily GJQ55_03840 IPR006398 2-hydroxy-3-oxopropionate reductase GJQ55_03840 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GJQ55_03840 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GJQ55_03840 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GJQ55_03840 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GJQ55_03840 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GJQ55_03845 IPR026040 Hydroxypyruvate isomerase-like GJQ55_03845 IPR013022 Xylose isomerase-like, TIM barrel domain GJQ55_03845 IPR036237 Xylose isomerase-like superfamily GJQ55_03850 IPR010710 Protein of unknown function DUF1289 GJQ55_03855 IPR012156 Cold shock, CspA GJQ55_03855 IPR011129 Cold shock domain GJQ55_03855 IPR019844 Cold-shock (CSD) domain GJQ55_03855 IPR002059 Cold-shock protein, DNA-binding GJQ55_03855 IPR012340 Nucleic acid-binding, OB-fold GJQ55_03860 IPR000160 GGDEF domain GJQ55_03860 IPR029787 Nucleotide cyclase GJQ55_03865 IPR005759 Endonuclease III GJQ55_03865 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal GJQ55_03865 IPR000445 Helix-hairpin-helix motif GJQ55_03865 IPR011257 DNA glycosylase GJQ55_03865 IPR004035 Endonuclease III, iron-sulphur binding site GJQ55_03865 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GJQ55_03865 IPR004036 Endonuclease III-like, conserved site-2 GJQ55_03865 IPR003265 HhH-GPD domain GJQ55_03870 IPR018146 Glyoxalase I, conserved site GJQ55_03870 IPR037523 Vicinal oxygen chelate (VOC) domain GJQ55_03870 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain GJQ55_03870 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase GJQ55_03870 IPR004361 Glyoxalase I GJQ55_03875 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GJQ55_03875 IPR014710 RmlC-like jelly roll fold GJQ55_03875 IPR011051 RmlC-like cupin domain superfamily GJQ55_03880 IPR005913 dTDP-4-dehydrorhamnose reductase family GJQ55_03880 IPR036291 NAD(P)-binding domain superfamily GJQ55_03880 IPR029903 RmlD-like substrate binding domain GJQ55_03885 IPR005888 dTDP-glucose 4,6-dehydratase GJQ55_03885 IPR016040 NAD(P)-binding domain GJQ55_03885 IPR036291 NAD(P)-binding domain superfamily GJQ55_03890 IPR026586 Type 2 tetrahydrodipicolinate N-succinyltransferase family GJQ55_03890 IPR011004 Trimeric LpxA-like superfamily GJQ55_03890 IPR019876 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, gammaproteobacteria GJQ55_03890 IPR032784 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain GJQ55_03890 IPR001451 Hexapeptide repeat GJQ55_03890 IPR038361 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain superfamily GJQ55_03895 IPR006660 Arsenate reductase-like GJQ55_03895 IPR036249 Thioredoxin-like superfamily GJQ55_03895 IPR006504 Transcriptional regulator Spx/MgsR GJQ55_03910 IPR005225 Small GTP-binding protein domain GJQ55_03910 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain GJQ55_03910 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_03910 IPR041069 FeoB, cytosolic helical domain GJQ55_03910 IPR003373 Ferrous iron transport protein B GJQ55_03910 IPR030389 FeoB-type guanine nucleotide-binding (G) domain GJQ55_03910 IPR011640 Ferrous iron transport protein B, C-terminal GJQ55_03915 IPR003373 Ferrous iron transport protein B GJQ55_03915 IPR011640 Ferrous iron transport protein B, C-terminal GJQ55_03915 IPR038157 Ferrous iron transporter, core domain GJQ55_03915 IPR041069 FeoB, cytosolic helical domain GJQ55_03915 IPR030389 FeoB-type guanine nucleotide-binding (G) domain GJQ55_03915 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain GJQ55_03915 IPR006073 GTP binding domain GJQ55_03915 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_03915 IPR005225 Small GTP-binding protein domain GJQ55_03915 IPR008988 Transcriptional repressor, C-terminal GJQ55_03915 IPR007167 Ferrous iron transporter FeoA domain GJQ55_03925 IPR003029 S1 domain GJQ55_03925 IPR004476 Ribonuclease II/ribonuclease R GJQ55_03925 IPR022966 Ribonuclease II/R, conserved site GJQ55_03925 IPR013223 Ribonuclease B, N-terminal OB domain GJQ55_03925 IPR011804 Ribonuclease II GJQ55_03925 IPR040476 RNase II/RNase R, cold shock domain GJQ55_03925 IPR011129 Cold shock domain GJQ55_03925 IPR001900 Ribonuclease II/R GJQ55_03925 IPR012340 Nucleic acid-binding, OB-fold GJQ55_03930 IPR018946 Alkaline phosphatase D-related GJQ55_03930 IPR006311 Twin-arginine translocation pathway, signal sequence GJQ55_03930 IPR008963 Purple acid phosphatase-like, N-terminal GJQ55_03930 IPR032093 Phospholipase D, N-terminal GJQ55_03930 IPR038607 PhoD-like superfamily GJQ55_03935 IPR004498 Ribosomal protein L11 methyltransferase GJQ55_03935 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase GJQ55_03940 IPR001279 Metallo-beta-lactamase GJQ55_03940 IPR022877 Protein of unknown funcion UPF0173 GJQ55_03940 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like GJQ55_03945 IPR002569 Peptide methionine sulphoxide reductase MsrA GJQ55_03945 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GJQ55_03950 IPR025669 AAA domain GJQ55_03950 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_03955 IPR018228 Deoxyribonuclease, TatD-related, conserved site GJQ55_03955 IPR032466 Metal-dependent hydrolase GJQ55_03955 IPR001130 TatD family GJQ55_03965 IPR010752 Protein of unknown function DUF1329 GJQ55_03970 IPR008258 Transglycosylase SLT domain 1 GJQ55_03970 IPR000189 Prokaryotic transglycosylase, active site GJQ55_03970 IPR024570 Murein transglycosylase-C, N-terminal GJQ55_03970 IPR023664 Murein transglycosylase-C GJQ55_03970 IPR023346 Lysozyme-like domain superfamily GJQ55_03975 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase GJQ55_03975 IPR004498 Ribosomal protein L11 methyltransferase GJQ55_03990 IPR000119 Histone-like DNA-binding protein GJQ55_03990 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GJQ55_03990 IPR005685 Integration host factor, beta subunit GJQ55_03990 IPR020816 Histone-like DNA-binding protein, conserved site GJQ55_04005 IPR014732 Orotidine 5'-phosphate decarboxylase GJQ55_04005 IPR011060 Ribulose-phosphate binding barrel GJQ55_04005 IPR001754 Orotidine 5'-phosphate decarboxylase domain GJQ55_04005 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GJQ55_04005 IPR013785 Aldolase-type TIM barrel GJQ55_04015 IPR014710 RmlC-like jelly roll fold GJQ55_04015 IPR005835 Nucleotidyl transferase domain GJQ55_04015 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GJQ55_04015 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase GJQ55_04015 IPR011051 RmlC-like cupin domain superfamily GJQ55_04015 IPR029044 Nucleotide-diphospho-sugar transferases GJQ55_04020 IPR005841 Alpha-D-phosphohexomutase superfamily GJQ55_04020 IPR016066 Alpha-D-phosphohexomutase, conserved site GJQ55_04020 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GJQ55_04020 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GJQ55_04020 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GJQ55_04020 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GJQ55_04020 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GJQ55_04020 IPR005843 Alpha-D-phosphohexomutase, C-terminal GJQ55_04030 IPR001296 Glycosyl transferase, family 1 GJQ55_04030 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain GJQ55_04030 IPR017814 Mycothiol biosynthesis protein, MshA GJQ55_04050 IPR006368 GDP-mannose 4,6-dehydratase GJQ55_04050 IPR016040 NAD(P)-binding domain GJQ55_04050 IPR036291 NAD(P)-binding domain superfamily GJQ55_04055 IPR016040 NAD(P)-binding domain GJQ55_04055 IPR036291 NAD(P)-binding domain superfamily GJQ55_04060 IPR001296 Glycosyl transferase, family 1 GJQ55_04060 IPR000368 Sucrose synthase GJQ55_04080 IPR000836 Phosphoribosyltransferase domain GJQ55_04080 IPR029057 Phosphoribosyltransferase-like GJQ55_04090 IPR005835 Nucleotidyl transferase domain GJQ55_04090 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GJQ55_04090 IPR029044 Nucleotide-diphospho-sugar transferases GJQ55_04095 IPR036291 NAD(P)-binding domain superfamily GJQ55_04095 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GJQ55_04095 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GJQ55_04095 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily GJQ55_04095 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GJQ55_04095 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GJQ55_04095 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GJQ55_04095 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GJQ55_04120 IPR029044 Nucleotide-diphospho-sugar transferases GJQ55_04120 IPR002495 Glycosyl transferase, family 8 GJQ55_04120 IPR001173 Glycosyltransferase 2-like GJQ55_04145 IPR001173 Glycosyltransferase 2-like GJQ55_04145 IPR029044 Nucleotide-diphospho-sugar transferases GJQ55_04150 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GJQ55_04150 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GJQ55_04150 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GJQ55_04150 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily GJQ55_04150 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GJQ55_04150 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GJQ55_04150 IPR036291 NAD(P)-binding domain superfamily GJQ55_04150 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GJQ55_04155 IPR002559 Transposase, IS4-like GJQ55_04155 IPR008490 Transposase InsH, N-terminal GJQ55_04165 IPR036291 NAD(P)-binding domain superfamily GJQ55_04165 IPR001509 NAD-dependent epimerase/dehydratase GJQ55_04170 IPR003362 Bacterial sugar transferase GJQ55_04170 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase GJQ55_04170 IPR017472 Undecaprenyl-phosphate galactose phosphotransferase, WbaP GJQ55_04190 IPR003593 AAA+ ATPase domain GJQ55_04190 IPR003439 ABC transporter-like GJQ55_04190 IPR017871 ABC transporter, conserved site GJQ55_04190 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_04205 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase GJQ55_04205 IPR010233 Ubiquinone biosynthesis O-methyltransferase GJQ55_04220 IPR029045 ClpP/crotonase-like domain superfamily GJQ55_04220 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GJQ55_04220 IPR001753 Enoyl-CoA hydratase/isomerase GJQ55_04220 IPR014748 Enoyl-CoA hydratase, C-terminal GJQ55_04225 IPR005119 LysR, substrate-binding GJQ55_04225 IPR000847 Transcription regulator HTH, LysR GJQ55_04225 IPR036388 Winged helix-like DNA-binding domain superfamily GJQ55_04225 IPR036390 Winged helix DNA-binding domain superfamily GJQ55_04235 IPR011051 RmlC-like cupin domain superfamily GJQ55_04235 IPR014710 RmlC-like jelly roll fold GJQ55_04235 IPR041602 Quercetin 2,3-dioxygenase, C-terminal cupin domain GJQ55_04235 IPR012093 Pirin GJQ55_04235 IPR003829 Pirin, N-terminal domain GJQ55_04245 IPR002912 ACT domain GJQ55_04245 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GJQ55_04245 IPR016204 Homoserine dehydrogenase GJQ55_04245 IPR001342 Homoserine dehydrogenase, catalytic GJQ55_04245 IPR019811 Homoserine dehydrogenase, conserved site GJQ55_04245 IPR036291 NAD(P)-binding domain superfamily GJQ55_04250 IPR036390 Winged helix DNA-binding domain superfamily GJQ55_04250 IPR005119 LysR, substrate-binding GJQ55_04250 IPR000847 Transcription regulator HTH, LysR GJQ55_04250 IPR036388 Winged helix-like DNA-binding domain superfamily GJQ55_04255 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GJQ55_04255 IPR025532 Glucose-6-phosphate 1-epimerase GJQ55_04255 IPR011013 Galactose mutarotase-like domain superfamily GJQ55_04255 IPR014718 Glycoside hydrolase-type carbohydrate-binding GJQ55_04265 IPR033704 dUTPase, trimeric GJQ55_04265 IPR011962 dCTP deaminase GJQ55_04265 IPR029054 dUTPase-like GJQ55_04265 IPR036157 dUTPase-like superfamily GJQ55_04280 IPR002641 Patatin-like phospholipase domain GJQ55_04280 IPR001423 Lysophospholipase patatin, conserved site GJQ55_04280 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GJQ55_04285 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase GJQ55_04285 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GJQ55_04285 IPR004556 Methyltransferase HemK-like GJQ55_04285 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GJQ55_04285 IPR007848 Methyltransferase small domain GJQ55_04290 IPR000453 Chorismate synthase GJQ55_04290 IPR020541 Chorismate synthase, conserved site GJQ55_04290 IPR035904 Chorismate synthase AroC superfamily GJQ55_04295 IPR036259 MFS transporter superfamily GJQ55_04295 IPR020846 Major facilitator superfamily domain GJQ55_04295 IPR024989 Major facilitator superfamily associated domain GJQ55_04310 IPR029058 Alpha/Beta hydrolase fold GJQ55_04310 IPR000073 Alpha/beta hydrolase fold-1 GJQ55_04310 IPR010963 Poly(R)-hydroxyalkanoic acid synthase, class I GJQ55_04310 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain GJQ55_04340 IPR004107 Integrase, SAM-like, N-terminal GJQ55_04340 IPR011010 DNA breaking-rejoining enzyme, catalytic core GJQ55_04340 IPR013762 Integrase-like, catalytic domain superfamily GJQ55_04340 IPR002104 Integrase, catalytic domain GJQ55_04340 IPR010998 Integrase/recombinase, N-terminal GJQ55_04350 IPR011791 Cd(II)/Pb(II)-responsive transcriptional regulator GJQ55_04350 IPR009061 Putative DNA-binding domain superfamily GJQ55_04350 IPR000551 MerR-type HTH domain GJQ55_04360 IPR001872 Peptidase A8, signal peptidase II GJQ55_04370 IPR034282 Copper resistance protein CopA, second cupredoxin domain GJQ55_04370 IPR034284 Copper resistance protein, first cupredoxin domain GJQ55_04370 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal GJQ55_04370 IPR006311 Twin-arginine translocation pathway, signal sequence GJQ55_04370 IPR008972 Cupredoxin GJQ55_04370 IPR034279 Copper resistance protein, third cupredoxin domain GJQ55_04370 IPR033138 Multicopper oxidases, conserved site GJQ55_04370 IPR001117 Multicopper oxidase, type 1 GJQ55_04370 IPR011706 Multicopper oxidase, type 2 GJQ55_04370 IPR002355 Multicopper oxidase, copper-binding site GJQ55_04370 IPR006376 Copper-resistance protein CopA GJQ55_04370 IPR011707 Multicopper oxidase, type 3 GJQ55_04375 IPR007939 Copper resistance B precursor GJQ55_04395 IPR009078 Ferritin-like superfamily GJQ55_04395 IPR008250 P-type ATPase, A domain superfamily GJQ55_04395 IPR023298 P-type ATPase, transmembrane domain superfamily GJQ55_04395 IPR018303 P-type ATPase, phosphorylation site GJQ55_04395 IPR023299 P-type ATPase, cytoplasmic domain N GJQ55_04395 IPR027256 P-type ATPase, subfamily IB GJQ55_04395 IPR001757 P-type ATPase GJQ55_04395 IPR012348 Ribonucleotide reductase-like GJQ55_04395 IPR011017 TRASH domain GJQ55_04395 IPR007029 YHS domain GJQ55_04395 IPR023214 HAD superfamily GJQ55_04395 IPR036412 HAD-like superfamily GJQ55_04400 IPR039420 Transcriptional regulatory protein WalR-like GJQ55_04400 IPR036388 Winged helix-like DNA-binding domain superfamily GJQ55_04400 IPR001789 Signal transduction response regulator, receiver domain GJQ55_04400 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response GJQ55_04400 IPR001867 OmpR/PhoB-type DNA-binding domain GJQ55_04400 IPR011006 CheY-like superfamily GJQ55_04400 IPR016032 Signal transduction response regulator, C-terminal effector GJQ55_04405 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GJQ55_04405 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GJQ55_04405 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GJQ55_04405 IPR005467 Histidine kinase domain GJQ55_04405 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GJQ55_04405 IPR003594 Histidine kinase/HSP90-like ATPase GJQ55_04405 IPR003660 HAMP domain GJQ55_04405 IPR006290 Heavy metal sensor kinase GJQ55_04410 IPR039420 Transcriptional regulatory protein WalR-like GJQ55_04410 IPR001789 Signal transduction response regulator, receiver domain GJQ55_04410 IPR016032 Signal transduction response regulator, C-terminal effector GJQ55_04410 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response GJQ55_04410 IPR001867 OmpR/PhoB-type DNA-binding domain GJQ55_04410 IPR011006 CheY-like superfamily GJQ55_04410 IPR036388 Winged helix-like DNA-binding domain superfamily GJQ55_04435 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain GJQ55_04435 IPR006143 RND efflux pump, membrane fusion protein GJQ55_04440 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GJQ55_04440 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GJQ55_04440 IPR001036 Acriflavin resistance protein GJQ55_04465 IPR005695 Cobalt/zinc/cadmium resistance protein CzcB GJQ55_04465 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain GJQ55_04465 IPR005695 Cobalt/zinc/cadmium resistance protein CzcB GJQ55_04465 IPR006143 RND efflux pump, membrane fusion protein GJQ55_04465 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain GJQ55_04465 IPR006143 RND efflux pump, membrane fusion protein GJQ55_04470 IPR001036 Acriflavin resistance protein GJQ55_04470 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GJQ55_04470 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GJQ55_04475 IPR036412 HAD-like superfamily GJQ55_04475 IPR023299 P-type ATPase, cytoplasmic domain N GJQ55_04475 IPR023298 P-type ATPase, transmembrane domain superfamily GJQ55_04475 IPR018303 P-type ATPase, phosphorylation site GJQ55_04475 IPR001757 P-type ATPase GJQ55_04475 IPR008250 P-type ATPase, A domain superfamily GJQ55_04475 IPR036163 Heavy metal-associated domain superfamily GJQ55_04475 IPR006121 Heavy metal-associated domain, HMA GJQ55_04475 IPR017969 Heavy-metal-associated, conserved site GJQ55_04475 IPR023214 HAD superfamily GJQ55_04475 IPR027256 P-type ATPase, subfamily IB GJQ55_04500 IPR036010 2Fe-2S ferredoxin-like superfamily GJQ55_04500 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GJQ55_04500 IPR012675 Beta-grasp domain superfamily GJQ55_04500 IPR017927 FAD-binding domain, ferredoxin reductase-type GJQ55_04500 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain GJQ55_04500 IPR001433 Oxidoreductase FAD/NAD(P)-binding GJQ55_04500 IPR000951 Phthalate dioxygenase reductase GJQ55_04500 IPR017938 Riboflavin synthase-like beta-barrel GJQ55_04500 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain GJQ55_04560 IPR019794 Peroxidase, active site GJQ55_04560 IPR000763 Catalase-peroxidase haem GJQ55_04560 IPR010255 Haem peroxidase superfamily GJQ55_04560 IPR002016 Haem peroxidase GJQ55_04570 IPR029055 Nucleophile aminohydrolases, N-terminal GJQ55_04570 IPR002692 Penicillin/GL-7-ACA/AHL/aculeacin-A acylase GJQ55_04570 IPR014395 Penicillin/GL-7-ACA/AHL acylase GJQ55_04570 IPR023343 Penicillin amidase type, domain 1 GJQ55_04575 IPR036291 NAD(P)-binding domain superfamily GJQ55_04575 IPR020904 Short-chain dehydrogenase/reductase, conserved site GJQ55_04575 IPR002347 Short-chain dehydrogenase/reductase SDR GJQ55_04585 IPR016059 DNA ligase, ATP-dependent, conserved site GJQ55_04585 IPR029319 DNA ligase, OB-like domain GJQ55_04585 IPR012340 Nucleic acid-binding, OB-fold GJQ55_04585 IPR012310 DNA ligase, ATP-dependent, central GJQ55_04590 IPR001667 DDH domain GJQ55_04590 IPR038763 DHH phosphoesterase superfamily GJQ55_04590 IPR003156 DHHA1 domain GJQ55_04590 IPR004610 Bacterial RecJ exonuclease GJQ55_04590 IPR041122 RecJ, OB domain GJQ55_04600 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GJQ55_04600 IPR001036 Acriflavin resistance protein GJQ55_04600 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GJQ55_04605 IPR006143 RND efflux pump, membrane fusion protein GJQ55_04605 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain GJQ55_04625 IPR034904 Fe-S cluster assembly domain superfamily GJQ55_04625 IPR002744 MIP18 family-like GJQ55_04630 IPR035903 HesB-like domain superfamily GJQ55_04630 IPR016092 FeS cluster insertion protein GJQ55_04630 IPR000361 FeS cluster biogenesis GJQ55_04630 IPR017870 FeS cluster insertion, C-terminal, conserved site GJQ55_04630 IPR011298 FeS assembly scaffold SufA GJQ55_04635 IPR010970 Cysteine desulfurase, SufS GJQ55_04635 IPR016454 Cysteine desulfurase GJQ55_04635 IPR015424 Pyridoxal phosphate-dependent transferase GJQ55_04635 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GJQ55_04635 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GJQ55_04635 IPR022471 Cysteine desulphurase, catalytic subunit, CsdA GJQ55_04635 IPR000192 Aminotransferase class V domain GJQ55_04640 IPR000825 SUF system FeS cluster assembly, SufBD GJQ55_04640 IPR037284 SUF system FeS cluster assembly, SufBD superfamily GJQ55_04640 IPR011542 SUF system FeS cluster assembly, SufD GJQ55_04645 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_04645 IPR010230 FeS cluster assembly SUF system, ATPase SufC GJQ55_04645 IPR003439 ABC transporter-like GJQ55_04645 IPR003593 AAA+ ATPase domain GJQ55_04645 IPR017871 ABC transporter, conserved site GJQ55_04650 IPR000825 SUF system FeS cluster assembly, SufBD GJQ55_04650 IPR037284 SUF system FeS cluster assembly, SufBD superfamily GJQ55_04650 IPR010231 SUF system FeS cluster assembly, SufB GJQ55_04665 IPR000594 THIF-type NAD/FAD binding fold GJQ55_04665 IPR035985 Ubiquitin-activating enzyme GJQ55_04670 IPR007358 Nucleoid-associated protein NdpA GJQ55_04675 IPR005764 Adenine phosphoribosyl transferase GJQ55_04675 IPR000836 Phosphoribosyltransferase domain GJQ55_04675 IPR029057 Phosphoribosyltransferase-like GJQ55_04680 IPR026033 Azaguanine-like transporters GJQ55_04680 IPR006043 Xanthine/uracil/vitamin C permease GJQ55_04690 IPR036249 Thioredoxin-like superfamily GJQ55_04690 IPR000889 Glutathione peroxidase GJQ55_04690 IPR029759 Glutathione peroxidase active site GJQ55_04695 IPR011042 Six-bladed beta-propeller, TolB-like GJQ55_04695 IPR003431 Beta propeller phytase GJQ55_04730 IPR010089 Flavoprotein WrbA-like GJQ55_04730 IPR005025 NADPH-dependent FMN reductase-like GJQ55_04730 IPR008254 Flavodoxin/nitric oxide synthase GJQ55_04730 IPR001226 Flavodoxin, conserved site GJQ55_04730 IPR029039 Flavoprotein-like superfamily GJQ55_04735 IPR006659 Arsenate reductase GJQ55_04735 IPR006660 Arsenate reductase-like GJQ55_04735 IPR036249 Thioredoxin-like superfamily GJQ55_04740 IPR023679 Uncharacterised protein family UPF0761, bacterial GJQ55_04740 IPR017039 Virulence factor BrkB GJQ55_04755 IPR005852 Phosphoglucomutase, alpha-D-glucose specific GJQ55_04755 IPR016066 Alpha-D-phosphohexomutase, conserved site GJQ55_04755 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GJQ55_04755 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GJQ55_04755 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GJQ55_04755 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GJQ55_04755 IPR005843 Alpha-D-phosphohexomutase, C-terminal GJQ55_04755 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GJQ55_04760 IPR036291 NAD(P)-binding domain superfamily GJQ55_04760 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain GJQ55_04760 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase GJQ55_04765 IPR008249 Uncharacterised protein family UPF0231 GJQ55_04770 IPR013520 Exonuclease, RNase T/DNA polymerase III GJQ55_04770 IPR005987 Ribonuclease T GJQ55_04770 IPR012337 Ribonuclease H-like superfamily GJQ55_04770 IPR036397 Ribonuclease H superfamily GJQ55_04775 IPR006680 Amidohydrolase-related GJQ55_04775 IPR032466 Metal-dependent hydrolase GJQ55_04775 IPR004721 Dihydroorotase homodimeric type GJQ55_04775 IPR002195 Dihydroorotase, conserved site GJQ55_04780 IPR006664 Outer membrane protein, bacterial GJQ55_04780 IPR006690 Outer membrane protein, OmpA-like, conserved site GJQ55_04780 IPR006665 OmpA-like domain GJQ55_04780 IPR036737 OmpA-like domain superfamily GJQ55_04785 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold GJQ55_04785 IPR001518 Argininosuccinate synthase GJQ55_04785 IPR023434 Argininosuccinate synthase, type 1 subfamily GJQ55_04785 IPR018223 Argininosuccinate synthase, conserved site GJQ55_04785 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GJQ55_04790 IPR002725 Protein of unknown function DUF45 GJQ55_04795 IPR005119 LysR, substrate-binding GJQ55_04795 IPR036388 Winged helix-like DNA-binding domain superfamily GJQ55_04795 IPR036390 Winged helix DNA-binding domain superfamily GJQ55_04795 IPR000847 Transcription regulator HTH, LysR GJQ55_04800 IPR017938 Riboflavin synthase-like beta-barrel GJQ55_04800 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain GJQ55_04800 IPR017927 FAD-binding domain, ferredoxin reductase-type GJQ55_04800 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GJQ55_04800 IPR033892 Ferredoxin--NADP reductase, bacteria GJQ55_04800 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain GJQ55_04800 IPR001433 Oxidoreductase FAD/NAD(P)-binding GJQ55_04815 IPR003660 HAMP domain GJQ55_04815 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GJQ55_04835 IPR020904 Short-chain dehydrogenase/reductase, conserved site GJQ55_04835 IPR002347 Short-chain dehydrogenase/reductase SDR GJQ55_04835 IPR036291 NAD(P)-binding domain superfamily GJQ55_04840 IPR032632 Peptidase M16, middle/third domain GJQ55_04840 IPR007863 Peptidase M16, C-terminal GJQ55_04840 IPR011765 Peptidase M16, N-terminal GJQ55_04840 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GJQ55_04840 IPR001431 Peptidase M16, zinc-binding site GJQ55_04850 IPR011006 CheY-like superfamily GJQ55_04850 IPR001867 OmpR/PhoB-type DNA-binding domain GJQ55_04850 IPR001789 Signal transduction response regulator, receiver domain GJQ55_04850 IPR039420 Transcriptional regulatory protein WalR-like GJQ55_04850 IPR036388 Winged helix-like DNA-binding domain superfamily GJQ55_04875 IPR002524 Cation efflux protein GJQ55_04875 IPR027470 Cation efflux protein, cytoplasmic domain GJQ55_04875 IPR036837 Cation efflux protein, cytoplasmic domain superfamily GJQ55_04875 IPR023783 Cation efflux pump FieF GJQ55_04875 IPR027469 Cation efflux transmembrane domain superfamily GJQ55_04885 IPR013515 Phytochrome, central region GJQ55_04885 IPR001294 Phytochrome GJQ55_04885 IPR016132 Phytochrome chromophore attachment domain GJQ55_04885 IPR029016 GAF-like domain superfamily GJQ55_04885 IPR000160 GGDEF domain GJQ55_04885 IPR003018 GAF domain GJQ55_04885 IPR035919 EAL domain superfamily GJQ55_04885 IPR029787 Nucleotide cyclase GJQ55_04885 IPR001633 EAL domain GJQ55_04890 IPR002123 Phospholipid/glycerol acyltransferase GJQ55_04895 IPR010766 DRTGG GJQ55_04895 IPR016475 Phosphate acetyltransferase, bacteria GJQ55_04895 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_04895 IPR004614 Phosphate acetyltransferase GJQ55_04895 IPR042113 Phosphate acetyltransferase, domain 1 GJQ55_04895 IPR042112 Phosphate acetyltransferase, domain 2 GJQ55_04895 IPR002505 Phosphate acetyl/butaryl transferase GJQ55_04895 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily GJQ55_04900 IPR004372 Acetate/propionate kinase GJQ55_04900 IPR000890 Aliphatic acid kinase, short-chain GJQ55_04900 IPR023865 Aliphatic acid kinase, short-chain, conserved site GJQ55_04910 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GJQ55_04935 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GJQ55_04935 IPR034505 Anaerobic coproporphyrinogen-III oxidase GJQ55_04935 IPR006638 Elp3/MiaB/NifB GJQ55_04935 IPR010723 HemN, C-terminal GJQ55_04935 IPR007197 Radical SAM GJQ55_04935 IPR023404 Radical SAM, alpha/beta horseshoe GJQ55_04940 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GJQ55_04940 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GJQ55_04940 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GJQ55_04940 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal GJQ55_04940 IPR005743 DNA gyrase, subunit A GJQ55_04940 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GJQ55_04940 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GJQ55_04950 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GJQ55_04950 IPR000192 Aminotransferase class V domain GJQ55_04950 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site GJQ55_04950 IPR022278 Phosphoserine aminotransferase GJQ55_04950 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GJQ55_04950 IPR015424 Pyridoxal phosphate-dependent transferase GJQ55_04955 IPR002912 ACT domain GJQ55_04955 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GJQ55_04955 IPR036263 Chorismate mutase type II superfamily GJQ55_04955 IPR036979 Chorismate mutase domain superfamily GJQ55_04955 IPR002701 Chorismate mutase II, prokaryotic-type GJQ55_04955 IPR010957 Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain GJQ55_04955 IPR001086 Prephenate dehydratase GJQ55_04955 IPR018528 Prephenate dehydratase, conserved site GJQ55_04960 IPR015424 Pyridoxal phosphate-dependent transferase GJQ55_04960 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GJQ55_04960 IPR004839 Aminotransferase, class I/classII GJQ55_04960 IPR005861 Histidinol-phosphate aminotransferase family GJQ55_04960 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GJQ55_04960 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GJQ55_04965 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GJQ55_04965 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site GJQ55_04965 IPR036968 Enolpyruvate transferase domain superfamily GJQ55_04965 IPR001986 Enolpyruvate transferase domain GJQ55_04965 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GJQ55_04970 IPR003136 Cytidylate kinase GJQ55_04970 IPR011994 Cytidylate kinase domain GJQ55_04970 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_04975 IPR022967 RNA-binding domain, S1 GJQ55_04975 IPR012340 Nucleic acid-binding, OB-fold GJQ55_04975 IPR000110 Ribosomal protein S1 GJQ55_04975 IPR003029 S1 domain GJQ55_04985 IPR002376 Formyl transferase, N-terminal GJQ55_04985 IPR036477 Formyl transferase, N-terminal domain superfamily GJQ55_04985 IPR004607 Phosphoribosylglycinamide formyltransferase GJQ55_04985 IPR001555 Phosphoribosylglycinamide formyltransferase, active site GJQ55_04990 IPR010918 PurM-like, C-terminal domain GJQ55_04990 IPR036676 PurM-like, C-terminal domain superfamily GJQ55_04990 IPR016188 PurM-like, N-terminal domain GJQ55_04990 IPR036921 PurM-like, N-terminal domain superfamily GJQ55_04990 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GJQ55_05000 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_05000 IPR022864 DnaA regulatory inactivator Hda, Enterobacteriaceae GJQ55_05000 IPR017788 DnaA regulatory inactivator Hda GJQ55_05000 IPR013317 Chromosomal replication initiator protein DnaA GJQ55_05000 IPR020591 Chromosomal replication control, initiator DnaA-like GJQ55_05005 IPR004839 Aminotransferase, class I/classII GJQ55_05005 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GJQ55_05005 IPR015424 Pyridoxal phosphate-dependent transferase GJQ55_05005 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GJQ55_05005 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GJQ55_05010 IPR036876 UVR domain superfamily GJQ55_05010 IPR024759 UvrB, YAD/RRR-motif-containing domain GJQ55_05010 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_05010 IPR001943 UVR domain GJQ55_05010 IPR014001 Helicase superfamily 1/2, ATP-binding domain GJQ55_05010 IPR001650 Helicase, C-terminal GJQ55_05010 IPR004807 UvrABC system, subunit B GJQ55_05010 IPR041471 UvrB, interaction domain GJQ55_05010 IPR006935 Helicase/UvrB, N-terminal GJQ55_05025 IPR039543 Lipid-binding protein POX18/YhbT/NSL-TP1 GJQ55_05025 IPR003033 SCP2 sterol-binding domain GJQ55_05025 IPR036527 SCP2 sterol-binding domain superfamily GJQ55_05025 IPR016830 Uncharacterised conserved protein UCP025550, lipid carrier protein, YhbT GJQ55_05030 IPR001539 Peptidase U32 GJQ55_05030 IPR036206 Thiamin phosphate synthase superfamily GJQ55_05035 IPR001539 Peptidase U32 GJQ55_05040 IPR014958 DGC GJQ55_05045 IPR008168 Cytochrome c, class IC GJQ55_05045 IPR009056 Cytochrome c-like domain GJQ55_05045 IPR036909 Cytochrome c-like domain superfamily GJQ55_05055 IPR024791 Cytochrome c oxidase subunit III GJQ55_05055 IPR000298 Cytochrome c oxidase subunit III-like GJQ55_05055 IPR035973 Cytochrome c oxidase subunit III-like superfamily GJQ55_05055 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GJQ55_05060 IPR002035 von Willebrand factor, type A GJQ55_05060 IPR036465 von Willebrand factor A-like domain superfamily GJQ55_05070 IPR023616 Cytochrome c oxidase-like, subunit I domain GJQ55_05070 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GJQ55_05070 IPR000883 Cytochrome c oxidase subunit I GJQ55_05070 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GJQ55_05075 IPR036909 Cytochrome c-like domain superfamily GJQ55_05075 IPR009056 Cytochrome c-like domain GJQ55_05080 IPR011704 ATPase, dynein-related, AAA domain GJQ55_05080 IPR013615 CbbQ/NirQ/NorQ, C-terminal GJQ55_05080 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_05085 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily GJQ55_05085 IPR039426 Vitamin B12 transporter BtuB-like GJQ55_05085 IPR012910 TonB-dependent receptor, plug domain GJQ55_05085 IPR037066 TonB-dependent receptor, plug domain superfamily GJQ55_05085 IPR000531 TonB-dependent receptor-like, beta-barrel GJQ55_05085 IPR010916 TonB box, conserved site GJQ55_05085 IPR010917 TonB-dependent receptor, conserved site GJQ55_05090 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily GJQ55_05090 IPR003143 Cytochrome cd1-nitrite reductase, C-terminal domain superfamily GJQ55_05090 IPR036909 Cytochrome c-like domain superfamily GJQ55_05090 IPR009056 Cytochrome c-like domain GJQ55_05110 IPR029095 NarX-like, N-terminal GJQ55_05110 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GJQ55_05110 IPR042295 NarX-like, N-terminal domain superfamily GJQ55_05110 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing GJQ55_05110 IPR005467 Histidine kinase domain GJQ55_05110 IPR003660 HAMP domain GJQ55_05110 IPR003594 Histidine kinase/HSP90-like ATPase GJQ55_05110 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GJQ55_05115 IPR006468 Nitrate reductase, alpha subunit GJQ55_05115 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GJQ55_05115 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GJQ55_05115 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GJQ55_05115 IPR006656 Molybdopterin oxidoreductase GJQ55_05115 IPR006657 Molybdopterin dinucleotide-binding domain GJQ55_05115 IPR037943 Nitrate reductase alpha subunit-like, MopB domain GJQ55_05115 IPR028189 Nitrate reductase, alpha subunit, N-terminal GJQ55_05115 IPR009010 Aspartate decarboxylase-like domain superfamily GJQ55_05120 IPR029263 Respiratory nitrate reductase beta, C-terminal GJQ55_05120 IPR038262 Nitrate reductase beta, C-terminal domain superfamily GJQ55_05120 IPR006547 Nitrate reductase, beta subunit GJQ55_05120 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain GJQ55_05125 IPR042291 Nitrate reductase chaperone, NarJ, domain 2 GJQ55_05125 IPR020945 DMSO/Nitrate reductase chaperone GJQ55_05125 IPR042290 Nitrate reductase chaperone, NarJ, domain 1 GJQ55_05125 IPR036411 TorD-like superfamily GJQ55_05125 IPR003765 Nitrate reductase chaperone, NarJ GJQ55_05130 IPR036197 NarG-like superfamily GJQ55_05130 IPR023234 NarG-like domain GJQ55_05130 IPR003816 Nitrate reductase, gamma subunit GJQ55_05135 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GJQ55_05135 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site GJQ55_05135 IPR023034 Peptidyl-prolyl isomerase SurA GJQ55_05135 IPR015391 SurA N-terminal GJQ55_05135 IPR027304 Trigger factor/SurA domain superfamily GJQ55_05145 IPR011701 Major facilitator superfamily GJQ55_05145 IPR036259 MFS transporter superfamily GJQ55_05145 IPR004737 Nitrate transporter GJQ55_05155 IPR004737 Nitrate transporter GJQ55_05155 IPR011701 Major facilitator superfamily GJQ55_05155 IPR020846 Major facilitator superfamily domain GJQ55_05155 IPR036259 MFS transporter superfamily GJQ55_05180 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GJQ55_05180 IPR003448 Molybdopterin biosynthesis MoaE GJQ55_05185 IPR012675 Beta-grasp domain superfamily GJQ55_05185 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp GJQ55_05185 IPR003749 Sulfur carrier ThiS/MoaD-like GJQ55_05190 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GJQ55_05190 IPR023045 Molybdenum cofactor biosynthesis C GJQ55_05190 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GJQ55_05195 IPR012245 Molybdenum cofactor biosynthesis protein MoaB GJQ55_05195 IPR036425 MoaB/Mog-like domain superfamily GJQ55_05195 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria GJQ55_05195 IPR008284 Molybdenum cofactor biosynthesis, conserved site GJQ55_05195 IPR001453 MoaB/Mog domain GJQ55_05200 IPR025877 MobA-like NTP transferase GJQ55_05200 IPR013482 Molybdenum cofactor guanylyltransferase GJQ55_05200 IPR029044 Nucleotide-diphospho-sugar transferases GJQ55_05205 IPR006638 Elp3/MiaB/NifB GJQ55_05205 IPR013785 Aldolase-type TIM barrel GJQ55_05205 IPR013483 Molybdenum cofactor biosynthesis protein A GJQ55_05205 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GJQ55_05205 IPR010505 Molybdenum cofactor synthesis C-terminal GJQ55_05205 IPR007197 Radical SAM GJQ55_05210 IPR000792 Transcription regulator LuxR, C-terminal GJQ55_05210 IPR036388 Winged helix-like DNA-binding domain superfamily GJQ55_05210 IPR016032 Signal transduction response regulator, C-terminal effector GJQ55_05210 IPR011006 CheY-like superfamily GJQ55_05210 IPR001789 Signal transduction response regulator, receiver domain GJQ55_05215 IPR036688 MoeA, C-terminal, domain IV superfamily GJQ55_05215 IPR036135 MoeA, N-terminal and linker domain superfamily GJQ55_05215 IPR005110 MoeA, N-terminal and linker domain GJQ55_05215 IPR005111 MoeA, C-terminal, domain IV GJQ55_05215 IPR001453 MoaB/Mog domain GJQ55_05215 IPR008284 Molybdenum cofactor biosynthesis, conserved site GJQ55_05215 IPR038987 Molybdopterin biosynthesis protein MoeA-like GJQ55_05215 IPR036425 MoaB/Mog-like domain superfamily GJQ55_05220 IPR035985 Ubiquitin-activating enzyme GJQ55_05220 IPR000594 THIF-type NAD/FAD binding fold GJQ55_05220 IPR012730 Molybdopterin synthase sulfurylase MoeB GJQ55_05225 IPR003593 AAA+ ATPase domain GJQ55_05225 IPR029016 GAF-like domain superfamily GJQ55_05225 IPR003018 GAF domain GJQ55_05225 IPR009057 Homeobox-like domain superfamily GJQ55_05225 IPR002197 DNA binding HTH domain, Fis-type GJQ55_05225 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_05225 IPR002078 RNA polymerase sigma factor 54 interaction domain GJQ55_05225 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 GJQ55_05225 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 GJQ55_05225 IPR025944 Sigma-54 interaction domain, conserved site GJQ55_05230 IPR023742 Iron-sulfur cluster repair protein YftE GJQ55_05230 IPR012312 Haemerythrin-like GJQ55_05230 IPR019903 Repair of iron centres family GJQ55_05235 IPR004671 Na+/H+ antiporter NhaB GJQ55_05240 IPR036425 MoaB/Mog-like domain superfamily GJQ55_05240 IPR001453 MoaB/Mog domain GJQ55_05240 IPR008284 Molybdenum cofactor biosynthesis, conserved site GJQ55_05245 IPR002818 DJ-1/PfpI GJQ55_05245 IPR006287 Protein/nucleic acid deglycase DJ-1 GJQ55_05245 IPR029062 Class I glutamine amidotransferase-like GJQ55_05250 IPR006694 Fatty acid hydroxylase GJQ55_05255 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal GJQ55_05255 IPR009057 Homeobox-like domain superfamily GJQ55_05255 IPR018060 DNA binding HTH domain, AraC-type GJQ55_05255 IPR020449 Transcription regulator HTH, AraC- type GJQ55_05260 IPR033728 Threonine-tRNA ligase catalytic core domain GJQ55_05260 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GJQ55_05260 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GJQ55_05260 IPR012676 TGS-like GJQ55_05260 IPR002320 Threonine-tRNA ligase, class IIa GJQ55_05260 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GJQ55_05260 IPR006195 Aminoacyl-tRNA synthetase, class II GJQ55_05260 IPR004095 TGS GJQ55_05260 IPR036621 Anticodon-binding domain superfamily GJQ55_05260 IPR012675 Beta-grasp domain superfamily GJQ55_05260 IPR004154 Anticodon-binding GJQ55_05265 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GJQ55_05265 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GJQ55_05265 IPR019813 Translation initiation factor 3, conserved site GJQ55_05265 IPR019815 Translation initiation factor 3, C-terminal GJQ55_05265 IPR019814 Translation initiation factor 3, N-terminal GJQ55_05265 IPR001288 Translation initiation factor 3 GJQ55_05270 IPR021137 Ribosomal protein L35 GJQ55_05270 IPR018265 Ribosomal protein L35, conserved site GJQ55_05270 IPR001706 Ribosomal protein L35, non-mitochondrial GJQ55_05270 IPR037229 Ribosomal protein L35 superfamily GJQ55_05275 IPR005813 Ribosomal protein L20 GJQ55_05275 IPR035566 Ribosomal protein L20, C-terminal GJQ55_05280 IPR006195 Aminoacyl-tRNA synthetase, class II GJQ55_05280 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GJQ55_05280 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GJQ55_05280 IPR002319 Phenylalanyl-tRNA synthetase GJQ55_05280 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GJQ55_05280 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GJQ55_05285 IPR033714 Phenylalanly tRNA synthetase, tRNA-binding-domain GJQ55_05285 IPR005147 tRNA synthetase, B5-domain GJQ55_05285 IPR002547 tRNA-binding domain GJQ55_05285 IPR041616 Phenylalanyl tRNA synthetase beta chain, core domain GJQ55_05285 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GJQ55_05285 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 GJQ55_05285 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily GJQ55_05285 IPR005121 Ferrodoxin-fold anticodon-binding domain GJQ55_05285 IPR009061 Putative DNA-binding domain superfamily GJQ55_05285 IPR005146 B3/B4 tRNA-binding domain GJQ55_05285 IPR012340 Nucleic acid-binding, OB-fold GJQ55_05290 IPR000119 Histone-like DNA-binding protein GJQ55_05290 IPR020816 Histone-like DNA-binding protein, conserved site GJQ55_05290 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GJQ55_05290 IPR005684 Integration host factor, alpha subunit GJQ55_05305 IPR035965 PAS domain superfamily GJQ55_05305 IPR013655 PAS fold-3 GJQ55_05305 IPR000700 PAS-associated, C-terminal GJQ55_05305 IPR000014 PAS domain GJQ55_05305 IPR001610 PAC motif GJQ55_05305 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GJQ55_05305 IPR004090 Chemotaxis methyl-accepting receptor GJQ55_05310 IPR025857 MacB-like periplasmic core domain GJQ55_05310 IPR017871 ABC transporter, conserved site GJQ55_05310 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_05310 IPR017911 ABC transporter, macrolide export, ATP-binding domain GJQ55_05310 IPR003838 ABC transporter permease protein domain GJQ55_05310 IPR003593 AAA+ ATPase domain GJQ55_05310 IPR003439 ABC transporter-like GJQ55_05315 IPR003593 AAA+ ATPase domain GJQ55_05315 IPR003838 ABC transporter permease protein domain GJQ55_05315 IPR003439 ABC transporter-like GJQ55_05315 IPR017871 ABC transporter, conserved site GJQ55_05315 IPR017911 ABC transporter, macrolide export, ATP-binding domain GJQ55_05315 IPR025857 MacB-like periplasmic core domain GJQ55_05315 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_05320 IPR003593 AAA+ ATPase domain GJQ55_05320 IPR003838 ABC transporter permease protein domain GJQ55_05320 IPR003439 ABC transporter-like GJQ55_05320 IPR025857 MacB-like periplasmic core domain GJQ55_05320 IPR017911 ABC transporter, macrolide export, ATP-binding domain GJQ55_05320 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_05320 IPR017871 ABC transporter, conserved site GJQ55_05330 IPR018636 Protein of unknown function DUF2058 GJQ55_05335 IPR011761 ATP-grasp fold GJQ55_05335 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type GJQ55_05335 IPR013815 ATP-grasp fold, subdomain 1 GJQ55_05335 IPR016185 Pre-ATP-grasp domain superfamily GJQ55_05335 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GJQ55_05335 IPR040686 Phosphoribosylaminoimidazole carboxylase, C-terminal domain GJQ55_05335 IPR011054 Rudiment single hybrid motif GJQ55_05340 IPR035893 PurE domain superfamily GJQ55_05340 IPR000031 PurE domain GJQ55_05340 IPR033747 Class I PurE GJQ55_05340 IPR024694 PurE, prokaryotic type GJQ55_05350 IPR025110 AMP-binding enzyme, C-terminal domain GJQ55_05350 IPR020845 AMP-binding, conserved site GJQ55_05350 IPR000873 AMP-dependent synthetase/ligase GJQ55_05350 IPR030310 Long-chain-fatty-acid--CoA ligase FadD17 GJQ55_05350 IPR042099 AMP-dependent synthetase-like superfamily GJQ55_05355 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GJQ55_05355 IPR006089 Acyl-CoA dehydrogenase, conserved site GJQ55_05355 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GJQ55_05355 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GJQ55_05355 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GJQ55_05355 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GJQ55_05355 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GJQ55_05360 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GJQ55_05360 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GJQ55_05360 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GJQ55_05360 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GJQ55_05360 IPR006089 Acyl-CoA dehydrogenase, conserved site GJQ55_05360 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GJQ55_05360 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GJQ55_05370 IPR005583 Peroxide stress protein YaaA GJQ55_05385 IPR000639 Epoxide hydrolase-like GJQ55_05385 IPR029058 Alpha/Beta hydrolase fold GJQ55_05385 IPR013595 Peptidase S33 tripeptidyl aminopeptidase-like, C-terminal GJQ55_05385 IPR000073 Alpha/beta hydrolase fold-1 GJQ55_05390 IPR036397 Ribonuclease H superfamily GJQ55_05390 IPR023607 Exodeoxyribonuclease I GJQ55_05390 IPR034748 Exonuclease I, C-terminal alpha-helical domain GJQ55_05390 IPR034747 Exonuclease I, SH3-like domain GJQ55_05390 IPR038649 Exonuclease I, SH3-like domain superfamily GJQ55_05390 IPR013620 Exodeoxyribonuclease I, C-terminal GJQ55_05390 IPR012337 Ribonuclease H-like superfamily GJQ55_05390 IPR013520 Exonuclease, RNase T/DNA polymerase III GJQ55_05400 IPR025105 Domain of unknown function DUF4010 GJQ55_05420 IPR010920 LSM domain superfamily GJQ55_05420 IPR006685 Mechanosensitive ion channel MscS GJQ55_05420 IPR011066 Mechanosensitive ion channel MscS, C-terminal GJQ55_05420 IPR030192 Miniconductance mechanosensitive channel YbdG GJQ55_05425 IPR002781 Transmembrane protein TauE-like GJQ55_05430 IPR028619 ATP-dependent RNA helicase DbpA GJQ55_05430 IPR014001 Helicase superfamily 1/2, ATP-binding domain GJQ55_05430 IPR001650 Helicase, C-terminal GJQ55_05430 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily GJQ55_05430 IPR011545 DEAD/DEAH box helicase domain GJQ55_05430 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain GJQ55_05430 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site GJQ55_05430 IPR014014 RNA helicase, DEAD-box type, Q motif GJQ55_05430 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_05435 IPR030390 RNA methyltransferase TrmA, active site GJQ55_05435 IPR030391 RNA methyltransferase TrmA, conserved site GJQ55_05435 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase GJQ55_05435 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GJQ55_05435 IPR010280 (Uracil-5)-methyltransferase family GJQ55_05440 IPR029069 HotDog domain superfamily GJQ55_05440 IPR003703 Acyl-CoA thioesterase GJQ55_05450 IPR037522 HD-GYP domain GJQ55_05450 IPR006675 HDIG domain GJQ55_05450 IPR006674 HD domain GJQ55_05450 IPR003607 HD/PDEase domain GJQ55_05450 IPR021812 Protein of unknown function DUF3391 GJQ55_05460 IPR011055 Duplicated hybrid motif GJQ55_05460 IPR016047 Peptidase M23 GJQ55_05460 IPR007340 Opacity-associated protein A GJQ55_05465 IPR025824 OB-fold nucleic acid binding domain GJQ55_05465 IPR020579 Exonuclease VII, large subunit, C-terminal GJQ55_05465 IPR020579 Exonuclease VII, large subunit, C-terminal GJQ55_05465 IPR003753 Exonuclease VII, large subunit GJQ55_05465 IPR003753 Exonuclease VII, large subunit GJQ55_05465 IPR025824 OB-fold nucleic acid binding domain GJQ55_05485 IPR000644 CBS domain GJQ55_05485 IPR013785 Aldolase-type TIM barrel GJQ55_05485 IPR005990 Inosine-5'-monophosphate dehydrogenase GJQ55_05485 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GJQ55_05485 IPR001093 IMP dehydrogenase/GMP reductase GJQ55_05490 IPR001674 GMP synthase, C-terminal GJQ55_05490 IPR017926 Glutamine amidotransferase GJQ55_05490 IPR029062 Class I glutamine amidotransferase-like GJQ55_05490 IPR004739 GMP synthase, glutamine amidotransferase GJQ55_05490 IPR022955 GMP synthase GJQ55_05490 IPR025777 GMP synthetase ATP pyrophosphatase domain GJQ55_05490 IPR022310 NAD/GMP synthase GJQ55_05490 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold GJQ55_05495 IPR013430 Toxin-antitoxin system, antidote protein, HigA GJQ55_05495 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GJQ55_05495 IPR001387 Cro/C1-type helix-turn-helix domain GJQ55_05500 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily GJQ55_05500 IPR007711 Toxin HigB-1 GJQ55_05505 IPR000620 EamA domain GJQ55_05520 IPR012156 Cold shock, CspA GJQ55_05520 IPR002059 Cold-shock protein, DNA-binding GJQ55_05520 IPR011129 Cold shock domain GJQ55_05520 IPR019844 Cold-shock (CSD) domain GJQ55_05520 IPR012340 Nucleic acid-binding, OB-fold GJQ55_05530 IPR036291 NAD(P)-binding domain superfamily GJQ55_05530 IPR005097 Saccharopine dehydrogenase, NADP binding domain GJQ55_05540 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GJQ55_05540 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GJQ55_05540 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GJQ55_05545 IPR011335 Restriction endonuclease type II-like GJQ55_05545 IPR009822 YaeQ GJQ55_05545 IPR038590 YaeQ superfamily GJQ55_05550 IPR036873 Rhodanese-like domain superfamily GJQ55_05550 IPR020936 Uncharacterised protein family UPF0176 GJQ55_05550 IPR040503 UPF0176, acylphosphatase-like domain GJQ55_05550 IPR001763 Rhodanese-like domain GJQ55_05565 IPR010968 Ion-translocating oxidoreductase complex subunit E GJQ55_05565 IPR003667 NqrDE/RnfAE GJQ55_05570 IPR007329 FMN-binding GJQ55_05570 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GJQ55_05575 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GJQ55_05575 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GJQ55_05580 IPR026902 RnfC Barrel sandwich hybrid domain GJQ55_05580 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain GJQ55_05580 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site GJQ55_05580 IPR009051 Alpha-helical ferredoxin GJQ55_05580 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GJQ55_05580 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain GJQ55_05580 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily GJQ55_05580 IPR019554 Soluble ligand binding domain GJQ55_05585 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site GJQ55_05585 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain GJQ55_05585 IPR007202 4Fe-4S domain GJQ55_05585 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GJQ55_05585 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GJQ55_05590 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GJQ55_05590 IPR003667 NqrDE/RnfAE GJQ55_05600 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GJQ55_05600 IPR035906 MetI-like superfamily GJQ55_05605 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GJQ55_05605 IPR035906 MetI-like superfamily GJQ55_05605 IPR025966 Oligopeptide transport permease C-like, N-terminal domain GJQ55_05610 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_05610 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GJQ55_05610 IPR017871 ABC transporter, conserved site GJQ55_05610 IPR003593 AAA+ ATPase domain GJQ55_05610 IPR003439 ABC transporter-like GJQ55_05620 IPR019591 Mrp/NBP35 ATP-binding protein GJQ55_05620 IPR000808 Mrp, conserved site GJQ55_05620 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_05620 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 GJQ55_05625 IPR023753 FAD/NAD(P)-binding domain GJQ55_05625 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GJQ55_05625 IPR013785 Aldolase-type TIM barrel GJQ55_05625 IPR036188 FAD/NAD(P)-binding domain superfamily GJQ55_05675 IPR001466 Beta-lactamase-related GJQ55_05675 IPR012338 Beta-lactamase/transpeptidase-like GJQ55_05680 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily GJQ55_05680 IPR003356 DNA methylase, adenine-specific GJQ55_05680 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase GJQ55_05685 IPR000055 Restriction endonuclease, type I, HsdS GJQ55_05695 IPR026287 Protein adenylyltransferase SoFic-like GJQ55_05695 IPR040198 Fido domain-containing protein GJQ55_05695 IPR025758 Fic/DOC N-terminal GJQ55_05695 IPR003812 Fido domain GJQ55_05695 IPR036597 Fido-like domain superfamily GJQ55_05700 IPR021810 Protein of unknown function DUF3387 GJQ55_05700 IPR014001 Helicase superfamily 1/2, ATP-binding domain GJQ55_05700 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_05700 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GJQ55_05700 IPR004473 Restriction endonuclease, type I, HsdR GJQ55_05700 IPR040980 SWI2/SNF2 ATPase GJQ55_05705 IPR024570 Murein transglycosylase-C, N-terminal GJQ55_05705 IPR000189 Prokaryotic transglycosylase, active site GJQ55_05705 IPR008258 Transglycosylase SLT domain 1 GJQ55_05705 IPR023664 Murein transglycosylase-C GJQ55_05705 IPR023346 Lysozyme-like domain superfamily GJQ55_05710 IPR006195 Aminoacyl-tRNA synthetase, class II GJQ55_05710 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GJQ55_05710 IPR033730 Prokaryote proline-tRNA ligase core domain GJQ55_05710 IPR004154 Anticodon-binding GJQ55_05710 IPR036621 Anticodon-binding domain superfamily GJQ55_05710 IPR002316 Proline-tRNA ligase, class IIa GJQ55_05710 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GJQ55_05710 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GJQ55_05710 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GJQ55_05710 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GJQ55_05720 IPR005019 Methyladenine glycosylase GJQ55_05720 IPR011257 DNA glycosylase GJQ55_05720 IPR004597 DNA-3-methyladenine glycosylase I GJQ55_05745 IPR000878 Tetrapyrrole methylase GJQ55_05745 IPR014777 Tetrapyrrole methylase, subdomain 1 GJQ55_05745 IPR035996 Tetrapyrrole methylase superfamily GJQ55_05745 IPR036291 NAD(P)-binding domain superfamily GJQ55_05745 IPR037115 Sirohaem synthase, dimerisation domain superfamily GJQ55_05745 IPR012409 Sirohaem synthase GJQ55_05745 IPR028281 Siroheme synthase, central domain GJQ55_05745 IPR019478 Sirohaem synthase, dimerisation domain GJQ55_05745 IPR006367 Sirohaem synthase, N-terminal GJQ55_05745 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GJQ55_05745 IPR014776 Tetrapyrrole methylase, subdomain 2 GJQ55_05745 IPR006366 Uroporphyrin-III C-methyltransferase GJQ55_05750 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GJQ55_05750 IPR006657 Molybdopterin dinucleotide-binding domain GJQ55_05750 IPR009010 Aspartate decarboxylase-like domain superfamily GJQ55_05750 IPR007419 BFD-like [2Fe-2S]-binding domain GJQ55_05750 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily GJQ55_05750 IPR041957 Nitrate reductase NapA-like, molybdopterin-binding domain GJQ55_05750 IPR006656 Molybdopterin oxidoreductase GJQ55_05750 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GJQ55_05755 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GJQ55_05755 IPR007419 BFD-like [2Fe-2S]-binding domain GJQ55_05755 IPR017121 Nitrite reductase [NAD(P)H], large subunit GJQ55_05755 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GJQ55_05755 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GJQ55_05755 IPR041575 NADH-rubredoxin oxidoreductase, C-terminal GJQ55_05755 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GJQ55_05755 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily GJQ55_05755 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GJQ55_05755 IPR023753 FAD/NAD(P)-binding domain GJQ55_05755 IPR036188 FAD/NAD(P)-binding domain superfamily GJQ55_05760 IPR017881 Nitrite reductase (NADH) small subunit GJQ55_05760 IPR012748 Rieske-like [2Fe-2S] domain, NirD-type GJQ55_05760 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GJQ55_05765 IPR017121 Nitrite reductase [NAD(P)H], large subunit GJQ55_05765 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GJQ55_05765 IPR041575 NADH-rubredoxin oxidoreductase, C-terminal GJQ55_05765 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GJQ55_05765 IPR007419 BFD-like [2Fe-2S]-binding domain GJQ55_05765 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GJQ55_05765 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GJQ55_05765 IPR036188 FAD/NAD(P)-binding domain superfamily GJQ55_05765 IPR023753 FAD/NAD(P)-binding domain GJQ55_05765 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily GJQ55_05780 IPR005561 ANTAR domain GJQ55_05780 IPR011006 CheY-like superfamily GJQ55_05780 IPR013587 Nitrate/nitrite sensing protein GJQ55_05780 IPR010910 Nitrate/nitrite sensing protein, bacterial GJQ55_05780 IPR036388 Winged helix-like DNA-binding domain superfamily GJQ55_05785 IPR003593 AAA+ ATPase domain GJQ55_05785 IPR003439 ABC transporter-like GJQ55_05785 IPR017871 ABC transporter, conserved site GJQ55_05785 IPR005890 Nitrate transport ATP-binding subunit C/D GJQ55_05785 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_05790 IPR035906 MetI-like superfamily GJQ55_05790 IPR005889 Nitrate transport permease GJQ55_05790 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GJQ55_05795 IPR006311 Twin-arginine translocation pathway, signal sequence GJQ55_05795 IPR029070 Chitinase insertion domain superfamily GJQ55_05800 IPR006638 Elp3/MiaB/NifB GJQ55_05800 IPR020612 Methylthiotransferase, conserved site GJQ55_05800 IPR007197 Radical SAM GJQ55_05800 IPR023404 Radical SAM, alpha/beta horseshoe GJQ55_05800 IPR022946 Uncharacterised protein family UPF0313 GJQ55_05800 IPR024560 Uncharacterised protein family UPF0313, C-terminal GJQ55_05800 IPR013704 Uncharacterised protein family UPF0313, N-terminal GJQ55_05830 IPR036291 NAD(P)-binding domain superfamily GJQ55_05830 IPR008141 Alanine dehydrogenase GJQ55_05830 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal GJQ55_05830 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GJQ55_05830 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain GJQ55_05835 IPR011335 Restriction endonuclease type II-like GJQ55_05835 IPR041500 RecC, C-terminal GJQ55_05835 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_05835 IPR013986 DExx box DNA helicase domain superfamily GJQ55_05835 IPR006697 RecBCD enzyme subunit RecC GJQ55_05840 IPR011335 Restriction endonuclease type II-like GJQ55_05840 IPR014017 UvrD-like DNA helicase, C-terminal GJQ55_05840 IPR000212 DNA helicase, UvrD/REP type GJQ55_05840 IPR011604 Exonuclease, phage-type/RecB, C-terminal GJQ55_05840 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_05840 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type GJQ55_05840 IPR034739 UvrD/AddA helicase, N-terminal GJQ55_05840 IPR014016 UvrD-like helicase, ATP-binding domain GJQ55_05840 IPR004586 RecBCD enzyme subunit RecB GJQ55_05845 IPR003593 AAA+ ATPase domain GJQ55_05845 IPR006344 RecBCD enzyme subunit RecD GJQ55_05845 IPR027785 UvrD-like helicase C-terminal domain GJQ55_05845 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_05845 IPR041851 RecBCD enzyme subunit RecD, N-terminal domain GJQ55_05865 IPR003776 YcaO-like domain GJQ55_05865 IPR041080 YcaO cyclodehydratase, C-terminal GJQ55_05870 IPR016185 Pre-ATP-grasp domain superfamily GJQ55_05870 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GJQ55_05870 IPR005482 Biotin carboxylase, C-terminal GJQ55_05870 IPR011054 Rudiment single hybrid motif GJQ55_05870 IPR005481 Biotin carboxylase-like, N-terminal domain GJQ55_05870 IPR011761 ATP-grasp fold GJQ55_05870 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GJQ55_05870 IPR011764 Biotin carboxylation domain GJQ55_05875 IPR000794 Beta-ketoacyl synthase GJQ55_05875 IPR014031 Beta-ketoacyl synthase, C-terminal GJQ55_05875 IPR014030 Beta-ketoacyl synthase, N-terminal GJQ55_05875 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain GJQ55_05875 IPR016039 Thiolase-like GJQ55_05875 IPR018201 Beta-ketoacyl synthase, active site GJQ55_05885 IPR031656 Alpha-glycerophosphate oxidase, C-terminal GJQ55_05885 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily GJQ55_05885 IPR006076 FAD dependent oxidoreductase GJQ55_05885 IPR036188 FAD/NAD(P)-binding domain superfamily GJQ55_05885 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GJQ55_05890 IPR013976 Metal-dependent hydrolase HDOD GJQ55_05890 IPR035919 EAL domain superfamily GJQ55_05890 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing GJQ55_05890 IPR001633 EAL domain GJQ55_05895 IPR024181 Chemotaxis response regulator CheV GJQ55_05895 IPR036061 CheW-like domain superfamily GJQ55_05895 IPR002545 CheW-like domain GJQ55_05895 IPR011006 CheY-like superfamily GJQ55_05895 IPR001789 Signal transduction response regulator, receiver domain GJQ55_05900 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GJQ55_05900 IPR005302 Molybdenum cofactor sulfurase, C-terminal GJQ55_05900 IPR012675 Beta-grasp domain superfamily GJQ55_05900 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GJQ55_05900 IPR036010 2Fe-2S ferredoxin-like superfamily GJQ55_05900 IPR011037 Pyruvate kinase-like, insert domain superfamily GJQ55_05900 IPR005303 MOSC, N-terminal beta barrel GJQ55_05905 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GJQ55_05905 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GJQ55_05905 IPR036291 NAD(P)-binding domain superfamily GJQ55_05905 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GJQ55_05905 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GJQ55_05905 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GJQ55_05905 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GJQ55_05910 IPR016143 Citrate synthase-like, small alpha subdomain GJQ55_05910 IPR002020 Citrate synthase GJQ55_05910 IPR019810 Citrate synthase active site GJQ55_05910 IPR024176 Citrate synthase, bacterial-type GJQ55_05910 IPR036969 Citrate synthase superfamily GJQ55_05910 IPR010953 Citrate synthase, type I GJQ55_05910 IPR016142 Citrate synthase-like, large alpha subdomain GJQ55_05915 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GJQ55_05915 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GJQ55_05915 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GJQ55_05915 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GJQ55_05920 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GJQ55_05920 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GJQ55_05920 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GJQ55_05925 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GJQ55_05925 IPR011281 Succinate dehydrogenase, flavoprotein subunit GJQ55_05925 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily GJQ55_05925 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GJQ55_05925 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GJQ55_05925 IPR036188 FAD/NAD(P)-binding domain superfamily GJQ55_05925 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain GJQ55_05925 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GJQ55_05930 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GJQ55_05930 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GJQ55_05930 IPR012675 Beta-grasp domain superfamily GJQ55_05930 IPR009051 Alpha-helical ferredoxin GJQ55_05930 IPR036010 2Fe-2S ferredoxin-like superfamily GJQ55_05930 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain GJQ55_05930 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GJQ55_05930 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site GJQ55_05935 IPR029061 Thiamin diphosphate-binding fold GJQ55_05935 IPR042179 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal domain superfamily GJQ55_05935 IPR005475 Transketolase-like, pyrimidine-binding domain GJQ55_05935 IPR001017 Dehydrogenase, E1 component GJQ55_05935 IPR011603 2-oxoglutarate dehydrogenase E1 component GJQ55_05935 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain GJQ55_05935 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal GJQ55_05940 IPR006255 Dihydrolipoamide succinyltransferase GJQ55_05940 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GJQ55_05940 IPR000089 Biotin/lipoyl attachment GJQ55_05940 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily GJQ55_05940 IPR036625 E3-binding domain superfamily GJQ55_05940 IPR004167 Peripheral subunit-binding domain GJQ55_05940 IPR011053 Single hybrid motif GJQ55_05940 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site GJQ55_05945 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GJQ55_05945 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GJQ55_05945 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GJQ55_05945 IPR006258 Dihydrolipoamide dehydrogenase GJQ55_05945 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GJQ55_05945 IPR023753 FAD/NAD(P)-binding domain GJQ55_05945 IPR036188 FAD/NAD(P)-binding domain superfamily GJQ55_05950 IPR016102 Succinyl-CoA synthetase-like GJQ55_05950 IPR005809 Succinate--CoA synthetase, beta subunit GJQ55_05950 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GJQ55_05950 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site GJQ55_05950 IPR013815 ATP-grasp fold, subdomain 1 GJQ55_05950 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type GJQ55_05950 IPR011761 ATP-grasp fold GJQ55_05955 IPR016102 Succinyl-CoA synthetase-like GJQ55_05955 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site GJQ55_05955 IPR003781 CoA-binding GJQ55_05955 IPR005810 Succinyl-CoA ligase, alpha subunit GJQ55_05955 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GJQ55_05955 IPR036291 NAD(P)-binding domain superfamily GJQ55_05955 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site GJQ55_05960 IPR000873 AMP-dependent synthetase/ligase GJQ55_05960 IPR020845 AMP-binding, conserved site GJQ55_05960 IPR042099 AMP-dependent synthetase-like superfamily GJQ55_05960 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain GJQ55_05960 IPR025110 AMP-binding enzyme, C-terminal domain GJQ55_05970 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_05970 IPR003593 AAA+ ATPase domain GJQ55_05970 IPR003439 ABC transporter-like GJQ55_05970 IPR017871 ABC transporter, conserved site GJQ55_05975 IPR000412 ABC-2 transporter GJQ55_05975 IPR013525 ABC-2 type transporter GJQ55_05980 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GJQ55_05980 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GJQ55_05980 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal GJQ55_05985 IPR001789 Signal transduction response regulator, receiver domain GJQ55_05985 IPR029787 Nucleotide cyclase GJQ55_05985 IPR011006 CheY-like superfamily GJQ55_05985 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GJQ55_06000 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GJQ55_06000 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GJQ55_06000 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 GJQ55_06000 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GJQ55_06000 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GJQ55_06000 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GJQ55_06000 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold GJQ55_06000 IPR033910 Glutamyl-tRNA synthetase GJQ55_06020 IPR023214 HAD superfamily GJQ55_06020 IPR036412 HAD-like superfamily GJQ55_06020 IPR010023 KdsC family GJQ55_06025 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GJQ55_06025 IPR029044 Nucleotide-diphospho-sugar transferases GJQ55_06025 IPR003329 Acylneuraminate cytidylyltransferase GJQ55_06030 IPR039143 Glucosamine 6-phosphate N-acetyltransferase GJQ55_06030 IPR016181 Acyl-CoA N-acyltransferase GJQ55_06030 IPR000182 GNAT domain GJQ55_06035 IPR039994 JmjC domain-containing GJQ55_06035 IPR003347 JmjC domain GJQ55_06040 IPR013539 Adenylosuccinate lyase PurB, C-terminal GJQ55_06040 IPR024083 Fumarase/histidase, N-terminal GJQ55_06040 IPR008948 L-Aspartase-like GJQ55_06040 IPR022761 Fumarate lyase, N-terminal GJQ55_06040 IPR020557 Fumarate lyase, conserved site GJQ55_06040 IPR000362 Fumarate lyase family GJQ55_06040 IPR004769 Adenylosuccinate lyase GJQ55_06055 IPR011076 Malate synthase-like superfamily GJQ55_06055 IPR023310 Malate synthase G, beta sub-domain GJQ55_06055 IPR001465 Malate synthase GJQ55_06055 IPR006253 Malate synthase G GJQ55_06070 IPR036366 PGBD superfamily GJQ55_06070 IPR002477 Peptidoglycan binding-like GJQ55_06070 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_06070 IPR036365 PGBD-like superfamily GJQ55_06070 IPR003593 AAA+ ATPase domain GJQ55_06080 IPR006555 ATP-dependent helicase, C-terminal GJQ55_06080 IPR010614 DEAD2 GJQ55_06080 IPR039000 ATP-dependent DNA helicase DinG GJQ55_06080 IPR014013 Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type GJQ55_06080 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_06080 IPR001650 Helicase, C-terminal GJQ55_06095 IPR003838 ABC transporter permease protein domain GJQ55_06095 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GJQ55_06095 IPR025857 MacB-like periplasmic core domain GJQ55_06100 IPR003593 AAA+ ATPase domain GJQ55_06100 IPR003439 ABC transporter-like GJQ55_06100 IPR017871 ABC transporter, conserved site GJQ55_06100 IPR015854 ABC transporter, lipoprotein release, LolD GJQ55_06100 IPR011924 Lipoprotein releasing system, ATP-binding protein GJQ55_06100 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_06110 IPR004797 Competence protein ComEC/Rec2 GJQ55_06110 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like GJQ55_06110 IPR035681 ComA-like, MBL domain GJQ55_06110 IPR004477 ComEC/Rec2-related protein GJQ55_06110 IPR001279 Metallo-beta-lactamase GJQ55_06115 IPR002898 MotA/TolQ/ExbB proton channel GJQ55_06120 IPR003400 Biopolymer transport protein ExbD/TolR GJQ55_06125 IPR003593 AAA+ ATPase domain GJQ55_06125 IPR011527 ABC transporter type 1, transmembrane domain GJQ55_06125 IPR036640 ABC transporter type 1, transmembrane domain superfamily GJQ55_06125 IPR003439 ABC transporter-like GJQ55_06125 IPR017871 ABC transporter, conserved site GJQ55_06125 IPR011917 ABC transporter, lipid A export, MsbA GJQ55_06125 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_06125 IPR039421 Type I protein exporter GJQ55_06130 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_06130 IPR003758 Tetraacyldisaccharide 4'-kinase GJQ55_06135 IPR005651 Trm112-like GJQ55_06140 IPR036196 Phosphotyrosine protein phosphatase I superfamily GJQ55_06140 IPR017867 Protein-tyrosine phosphatase, low molecular weight GJQ55_06140 IPR023485 Phosphotyrosine protein phosphatase I GJQ55_06145 IPR016166 FAD-binding domain, PCMH-type GJQ55_06145 IPR036318 FAD-binding, type PCMH-like superfamily GJQ55_06145 IPR006094 FAD linked oxidase, N-terminal GJQ55_06145 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GJQ55_06145 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GJQ55_06145 IPR016169 FAD-binding, type PCMH, subdomain 2 GJQ55_06145 IPR016167 FAD-binding, type PCMH, subdomain 1 GJQ55_06145 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GJQ55_06150 IPR010138 UDP-2,3-diacylglucosamine hydrolase GJQ55_06150 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GJQ55_06155 IPR029000 Cyclophilin-like domain superfamily GJQ55_06155 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GJQ55_06155 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GJQ55_06155 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GJQ55_06160 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GJQ55_06160 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold GJQ55_06160 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GJQ55_06160 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal GJQ55_06160 IPR004514 Glutamine-tRNA synthetase GJQ55_06160 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GJQ55_06160 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily GJQ55_06160 IPR022861 Glutamine-tRNA ligase, bacterial GJQ55_06160 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GJQ55_06160 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GJQ55_06165 IPR015803 Cysteine-tRNA ligase GJQ55_06165 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GJQ55_06165 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase GJQ55_06165 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold GJQ55_06165 IPR032678 tRNA synthetases class I, catalytic domain GJQ55_06165 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GJQ55_06170 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GJQ55_06170 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GJQ55_06170 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GJQ55_06170 IPR036291 NAD(P)-binding domain superfamily GJQ55_06170 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GJQ55_06195 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GJQ55_06195 IPR005215 Trigger factor GJQ55_06195 IPR008880 Trigger factor, C-terminal GJQ55_06195 IPR037041 Trigger factor, C-terminal domain superfamily GJQ55_06195 IPR008881 Trigger factor, ribosome-binding, bacterial GJQ55_06195 IPR036611 Trigger factor ribosome-binding domain superfamily GJQ55_06195 IPR027304 Trigger factor/SurA domain superfamily GJQ55_06200 IPR018215 ClpP, Ser active site GJQ55_06200 IPR033135 ClpP, histidine active site GJQ55_06200 IPR029045 ClpP/crotonase-like domain superfamily GJQ55_06200 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA GJQ55_06200 IPR001907 ATP-dependent Clp protease proteolytic subunit GJQ55_06205 IPR038366 Zinc finger, ClpX C4-type superfamily GJQ55_06205 IPR010603 Zinc finger, ClpX C4-type GJQ55_06205 IPR003959 ATPase, AAA-type, core GJQ55_06205 IPR004487 Clp protease, ATP-binding subunit ClpX GJQ55_06205 IPR019489 Clp ATPase, C-terminal GJQ55_06205 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_06205 IPR003593 AAA+ ATPase domain GJQ55_06210 IPR020568 Ribosomal protein S5 domain 2-type fold GJQ55_06210 IPR015947 PUA-like superfamily GJQ55_06210 IPR003111 Lon, substrate-binding domain GJQ55_06210 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup GJQ55_06210 IPR008269 Peptidase S16, Lon proteolytic domain GJQ55_06210 IPR027065 Lon protease GJQ55_06210 IPR003593 AAA+ ATPase domain GJQ55_06210 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_06210 IPR027543 Lon protease, bacterial GJQ55_06210 IPR004815 Lon protease, bacterial/eukaryotic-type GJQ55_06210 IPR003959 ATPase, AAA-type, core GJQ55_06215 IPR000119 Histone-like DNA-binding protein GJQ55_06215 IPR020816 Histone-like DNA-binding protein, conserved site GJQ55_06215 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GJQ55_06220 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GJQ55_06220 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site GJQ55_06220 IPR027304 Trigger factor/SurA domain superfamily GJQ55_06220 IPR023059 Foldase protein PrsA GJQ55_06225 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GJQ55_06225 IPR036291 NAD(P)-binding domain superfamily GJQ55_06225 IPR002347 Short-chain dehydrogenase/reductase SDR GJQ55_06230 IPR000914 Solute-binding protein family 5 domain GJQ55_06230 IPR030678 Peptide/nickel binding protein, MppA-type GJQ55_06230 IPR039424 Solute-binding protein family 5 GJQ55_06235 IPR008258 Transglycosylase SLT domain 1 GJQ55_06235 IPR018392 LysM domain GJQ55_06235 IPR023346 Lysozyme-like domain superfamily GJQ55_06235 IPR036779 LysM domain superfamily GJQ55_06235 IPR000189 Prokaryotic transglycosylase, active site GJQ55_06245 IPR012337 Ribonuclease H-like superfamily GJQ55_06245 IPR002156 Ribonuclease H domain GJQ55_06245 IPR036397 Ribonuclease H superfamily GJQ55_06245 IPR022892 Ribonuclease HI GJQ55_06250 IPR006309 DNA polymerase 3, epsilon subunit GJQ55_06250 IPR013520 Exonuclease, RNase T/DNA polymerase III GJQ55_06250 IPR012337 Ribonuclease H-like superfamily GJQ55_06250 IPR036397 Ribonuclease H superfamily GJQ55_06250 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GJQ55_06270 IPR011991 ArsR-like helix-turn-helix domain GJQ55_06270 IPR001845 HTH ArsR-type DNA-binding domain GJQ55_06270 IPR036388 Winged helix-like DNA-binding domain superfamily GJQ55_06270 IPR036390 Winged helix DNA-binding domain superfamily GJQ55_06275 IPR003374 ApbE-like superfamily GJQ55_06275 IPR042159 Flavin-trafficking protein ApbE GJQ55_06275 IPR024932 Flavin transferase ApbE GJQ55_06285 IPR036188 FAD/NAD(P)-binding domain superfamily GJQ55_06285 IPR023753 FAD/NAD(P)-binding domain GJQ55_06285 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GJQ55_06285 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GJQ55_06285 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GJQ55_06285 IPR022962 Soluble pyridine nucleotide transhydrogenase GJQ55_06300 IPR013785 Aldolase-type TIM barrel GJQ55_06300 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GJQ55_06300 IPR004730 Transaldolase type 1 GJQ55_06300 IPR018225 Transaldolase, active site GJQ55_06305 IPR018517 tRNA-dihydrouridine synthase, conserved site GJQ55_06305 IPR001269 tRNA-dihydrouridine synthase GJQ55_06305 IPR035587 DUS-like, FMN-binding domain GJQ55_06305 IPR013785 Aldolase-type TIM barrel GJQ55_06305 IPR004653 tRNA-dihydrouridine(20/20a) synthase GJQ55_06310 IPR007451 High frequency lysogenization protein HflD GJQ55_06310 IPR035932 HflD-like superfamily GJQ55_06315 IPR023382 Adenine nucleotide alpha hydrolase-like domains GJQ55_06315 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold GJQ55_06315 IPR004506 tRNA-specific 2-thiouridylase GJQ55_06320 IPR020476 NUDIX hydrolase GJQ55_06320 IPR015797 NUDIX hydrolase-like domain superfamily GJQ55_06320 IPR020084 NUDIX hydrolase, conserved site GJQ55_06320 IPR000086 NUDIX hydrolase domain GJQ55_06320 IPR033713 Phosphatase NudJ GJQ55_06325 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GJQ55_06325 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GJQ55_06325 IPR020103 Pseudouridine synthase, catalytic domain superfamily GJQ55_06325 IPR006145 Pseudouridine synthase, RsuA/RluA GJQ55_06325 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain GJQ55_06330 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GJQ55_06335 IPR012156 Cold shock, CspA GJQ55_06335 IPR011129 Cold shock domain GJQ55_06335 IPR019844 Cold-shock (CSD) domain GJQ55_06335 IPR002059 Cold-shock protein, DNA-binding GJQ55_06335 IPR012751 CspD, cold shock GJQ55_06335 IPR012340 Nucleic acid-binding, OB-fold GJQ55_06340 IPR022935 ATP-dependent Clp protease adaptor protein ClpS GJQ55_06340 IPR003769 Adaptor protein ClpS, core GJQ55_06340 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like GJQ55_06345 IPR028299 ClpA/B, conserved site 2 GJQ55_06345 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_06345 IPR041546 ClpA/ClpB, AAA lid domain GJQ55_06345 IPR018368 ClpA/B, conserved site 1 GJQ55_06345 IPR003593 AAA+ ATPase domain GJQ55_06345 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GJQ55_06345 IPR004176 Clp, N-terminal GJQ55_06345 IPR036628 Clp, N-terminal domain superfamily GJQ55_06345 IPR019489 Clp ATPase, C-terminal GJQ55_06345 IPR001270 ClpA/B family GJQ55_06345 IPR003959 ATPase, AAA-type, core GJQ55_06350 IPR004368 Translation initiation factor IF-1 GJQ55_06350 IPR006196 RNA-binding domain, S1, IF1 type GJQ55_06350 IPR012340 Nucleic acid-binding, OB-fold GJQ55_06350 IPR022967 RNA-binding domain, S1 GJQ55_06355 IPR016181 Acyl-CoA N-acyltransferase GJQ55_06355 IPR017138 Aspartate/glutamate leucyltransferase GJQ55_06355 IPR030700 N-end rule aminoacyl transferase GJQ55_06355 IPR007472 N-end rule aminoacyl transferase, C-terminal GJQ55_06355 IPR007471 N-end aminoacyl transferase, N-terminal GJQ55_06360 IPR016181 Acyl-CoA N-acyltransferase GJQ55_06360 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GJQ55_06360 IPR042203 Leucyl/phenylalanyl-tRNA-protein transferase, C-terminal GJQ55_06365 IPR036390 Winged helix DNA-binding domain superfamily GJQ55_06365 IPR036388 Winged helix-like DNA-binding domain superfamily GJQ55_06365 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_06365 IPR002543 FtsK domain GJQ55_06365 IPR041027 FtsK alpha domain GJQ55_06365 IPR018541 FtsK gamma domain GJQ55_06365 IPR025199 DNA translocase FtsK, 4TM region GJQ55_06370 IPR029046 Lipoprotein localisation LolA/LolB/LppX GJQ55_06370 IPR004564 Outer membrane lipoprotein carrier protein LolA-like GJQ55_06370 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GJQ55_06375 IPR003593 AAA+ ATPase domain GJQ55_06375 IPR032423 AAA C-terminal domain GJQ55_06375 IPR003959 ATPase, AAA-type, core GJQ55_06375 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GJQ55_06375 IPR021886 MgsA AAA+ ATPase C-terminal GJQ55_06375 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_06380 IPR003691 Putative fluoride ion transporter CrcB GJQ55_06385 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GJQ55_06385 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GJQ55_06385 IPR033729 Serine-tRNA ligase catalytic core domain GJQ55_06385 IPR015866 Serine-tRNA synthetase, type1, N-terminal GJQ55_06385 IPR002317 Serine-tRNA ligase, type1 GJQ55_06385 IPR006195 Aminoacyl-tRNA synthetase, class II GJQ55_06385 IPR042103 Serine-tRNA synthetase, type1, N-terminal domain superfamily GJQ55_06390 IPR028281 Siroheme synthase, central domain GJQ55_06390 IPR019478 Sirohaem synthase, dimerisation domain GJQ55_06390 IPR036291 NAD(P)-binding domain superfamily GJQ55_06390 IPR006367 Sirohaem synthase, N-terminal GJQ55_06390 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GJQ55_06390 IPR000878 Tetrapyrrole methylase GJQ55_06390 IPR035996 Tetrapyrrole methylase superfamily GJQ55_06390 IPR014777 Tetrapyrrole methylase, subdomain 1 GJQ55_06390 IPR014776 Tetrapyrrole methylase, subdomain 2 GJQ55_06390 IPR006366 Uroporphyrin-III C-methyltransferase GJQ55_06390 IPR012409 Sirohaem synthase GJQ55_06390 IPR037115 Sirohaem synthase, dimerisation domain superfamily GJQ55_06395 IPR004090 Chemotaxis methyl-accepting receptor GJQ55_06395 IPR029151 Periplasmic sensor-like domain superfamily GJQ55_06395 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GJQ55_06395 IPR003660 HAMP domain GJQ55_06395 IPR033479 Double Cache domain 1 GJQ55_06395 IPR000727 Target SNARE coiled-coil homology domain GJQ55_06400 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily GJQ55_06400 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily GJQ55_06400 IPR000312 Glycosyl transferase, family 3 GJQ55_06400 IPR005940 Anthranilate phosphoribosyl transferase GJQ55_06400 IPR017459 Glycosyl transferase family 3, N-terminal domain GJQ55_06405 IPR042072 DsrC-like protein, C-terminal domain GJQ55_06405 IPR025526 DsrC-like domain superfamily GJQ55_06405 IPR007453 Sulphur transfer protein DsrC/TusE GJQ55_06415 IPR017462 Sulphur relay, TusC/DsrF GJQ55_06415 IPR027396 DsrEFH-like GJQ55_06415 IPR003787 Sulphur relay, DsrE/F-like protein GJQ55_06415 IPR037450 Sulphur relay, TusC GJQ55_06420 IPR027396 DsrEFH-like GJQ55_06420 IPR003787 Sulphur relay, DsrE/F-like protein GJQ55_06420 IPR017463 Sulphur relay, TusD/DsrE GJQ55_06430 IPR023696 Ureohydrolase domain superfamily GJQ55_06430 IPR000286 Histone deacetylase family GJQ55_06430 IPR023801 Histone deacetylase domain GJQ55_06430 IPR037138 Histone deacetylase domain superfamily GJQ55_06435 IPR011761 ATP-grasp fold GJQ55_06435 IPR013815 ATP-grasp fold, subdomain 1 GJQ55_06435 IPR003781 CoA-binding GJQ55_06435 IPR000182 GNAT domain GJQ55_06435 IPR036291 NAD(P)-binding domain superfamily GJQ55_06435 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain GJQ55_06435 IPR016102 Succinyl-CoA synthetase-like GJQ55_06435 IPR016181 Acyl-CoA N-acyltransferase GJQ55_06440 IPR011006 CheY-like superfamily GJQ55_06440 IPR016032 Signal transduction response regulator, C-terminal effector GJQ55_06440 IPR001789 Signal transduction response regulator, receiver domain GJQ55_06440 IPR000792 Transcription regulator LuxR, C-terminal GJQ55_06445 IPR004791 UvrABC system, subunit C GJQ55_06445 IPR001162 UvrC family homology region GJQ55_06445 IPR035901 GIY-YIG endonuclease superfamily GJQ55_06445 IPR038476 UvrC homology region 2 superfamily GJQ55_06445 IPR036876 UVR domain superfamily GJQ55_06445 IPR001943 UVR domain GJQ55_06445 IPR000305 GIY-YIG endonuclease GJQ55_06445 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GJQ55_06445 IPR010994 RuvA domain 2-like GJQ55_06450 IPR000462 CDP-alcohol phosphatidyltransferase GJQ55_06450 IPR023762 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, bacterial GJQ55_06450 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GJQ55_06480 IPR011798 Adenosine 5'-phosphosulphate reductase GJQ55_06480 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GJQ55_06480 IPR002500 Phosphoadenosine phosphosulphate reductase GJQ55_06480 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold GJQ55_06485 IPR011863 Phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein GJQ55_06485 IPR023214 HAD superfamily GJQ55_06485 IPR036412 HAD-like superfamily GJQ55_06490 IPR005801 ADC synthase GJQ55_06490 IPR019999 Anthranilate synthase component I-like GJQ55_06490 IPR006805 Anthranilate synthase component I, N-terminal GJQ55_06490 IPR015890 Chorismate-utilising enzyme, C-terminal GJQ55_06490 IPR005802 Aminodeoxychorismate synthase, component I GJQ55_06525 IPR005177 Bifunctional kinase-pyrophosphorylase GJQ55_06525 IPR026530 Phosphoenolpyruvate synthase regulatory protein GJQ55_06530 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GJQ55_06530 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GJQ55_06530 IPR040442 Pyruvate kinase-like domain superfamily GJQ55_06530 IPR036637 Phosphohistidine domain superfamily GJQ55_06530 IPR023151 PEP-utilising enzyme, conserved site GJQ55_06530 IPR018274 PEP-utilising enzyme, active site GJQ55_06530 IPR000121 PEP-utilising enzyme, C-terminal GJQ55_06530 IPR006319 Phosphoenolpyruvate synthase GJQ55_06530 IPR008279 PEP-utilising enzyme, mobile domain GJQ55_06530 IPR013815 ATP-grasp fold, subdomain 1 GJQ55_06540 IPR010203 Regulator of ribonuclease activity A GJQ55_06540 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein GJQ55_06540 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily GJQ55_06545 IPR011711 GntR, C-terminal GJQ55_06545 IPR008920 Transcription regulator FadR/GntR, C-terminal GJQ55_06545 IPR000524 Transcription regulator HTH, GntR GJQ55_06545 IPR036388 Winged helix-like DNA-binding domain superfamily GJQ55_06545 IPR036390 Winged helix DNA-binding domain superfamily GJQ55_06550 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GJQ55_06550 IPR040442 Pyruvate kinase-like domain superfamily GJQ55_06550 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GJQ55_06550 IPR039556 ICL/PEPM domain GJQ55_06550 IPR012695 2-methylisocitrate lyase GJQ55_06555 IPR011278 2-methylcitrate synthase/citrate synthase type I GJQ55_06555 IPR016142 Citrate synthase-like, large alpha subdomain GJQ55_06555 IPR016143 Citrate synthase-like, small alpha subdomain GJQ55_06555 IPR002020 Citrate synthase GJQ55_06555 IPR019810 Citrate synthase active site GJQ55_06555 IPR024176 Citrate synthase, bacterial-type GJQ55_06555 IPR036969 Citrate synthase superfamily GJQ55_06560 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GJQ55_06560 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GJQ55_06560 IPR036008 Aconitase, iron-sulfur domain GJQ55_06560 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel GJQ55_06560 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GJQ55_06560 IPR012708 2-methylisocitrate dehydratase AcnD, Fe/S-dependent GJQ55_06560 IPR006249 Aconitase/Iron-responsive element-binding protein 2 GJQ55_06570 IPR012709 2-methyl-aconitate isomerase PrpF GJQ55_06570 IPR007400 PrpF protein GJQ55_06580 IPR022967 RNA-binding domain, S1 GJQ55_06580 IPR004659 Ribonuclease E/G GJQ55_06580 IPR003029 S1 domain GJQ55_06580 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GJQ55_06580 IPR021968 Polyribonucleotide phosphorylase C-terminal GJQ55_06580 IPR012340 Nucleic acid-binding, OB-fold GJQ55_06580 IPR028878 Ribonuclease E GJQ55_06590 IPR020103 Pseudouridine synthase, catalytic domain superfamily GJQ55_06590 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GJQ55_06590 IPR006145 Pseudouridine synthase, RsuA/RluA GJQ55_06590 IPR002942 RNA-binding S4 domain GJQ55_06590 IPR036986 RNA-binding S4 domain superfamily GJQ55_06590 IPR006225 Pseudouridine synthase, RluC/RluD GJQ55_06595 IPR041492 Haloacid dehalogenase-like hydrolase GJQ55_06595 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic GJQ55_06595 IPR037512 Phosphoglycolate phosphatase, prokaryotic GJQ55_06595 IPR023198 Phosphoglycolate phosphatase-like, domain 2 GJQ55_06595 IPR006439 HAD hydrolase, subfamily IA GJQ55_06595 IPR036412 HAD-like superfamily GJQ55_06595 IPR006549 HAD-superfamily hydrolase,subfamily IIIA GJQ55_06595 IPR023214 HAD superfamily GJQ55_06600 IPR004635 Peptidase S49, SppA GJQ55_06600 IPR002142 Peptidase S49 GJQ55_06600 IPR029045 ClpP/crotonase-like domain superfamily GJQ55_06605 IPR003772 Large ribosomal RNA subunit accumulation protein YceD GJQ55_06605 IPR039255 Large ribosomal RNA subunit accumulation protein YceD, bacteria GJQ55_06610 IPR002677 Ribosomal protein L32p GJQ55_06610 IPR011332 Zinc-binding ribosomal protein GJQ55_06615 IPR003664 Fatty acid synthesis PlsX protein GJQ55_06615 IPR012281 Phospholipid biosynthesis protein, PlsX-like GJQ55_06620 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GJQ55_06620 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GJQ55_06620 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GJQ55_06620 IPR014043 Acyl transferase GJQ55_06620 IPR001227 Acyl transferase domain superfamily GJQ55_06620 IPR024925 Malonyl CoA-acyl carrier protein transacylase GJQ55_06625 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GJQ55_06625 IPR036291 NAD(P)-binding domain superfamily GJQ55_06625 IPR020904 Short-chain dehydrogenase/reductase, conserved site GJQ55_06625 IPR002347 Short-chain dehydrogenase/reductase SDR GJQ55_06630 IPR009081 Phosphopantetheine binding ACP domain GJQ55_06630 IPR006162 Phosphopantetheine attachment site GJQ55_06630 IPR036736 ACP-like superfamily GJQ55_06630 IPR003231 Acyl carrier protein (ACP) GJQ55_06635 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GJQ55_06635 IPR000794 Beta-ketoacyl synthase GJQ55_06635 IPR018201 Beta-ketoacyl synthase, active site GJQ55_06635 IPR014031 Beta-ketoacyl synthase, C-terminal GJQ55_06635 IPR014030 Beta-ketoacyl synthase, N-terminal GJQ55_06635 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain GJQ55_06635 IPR016039 Thiolase-like GJQ55_06640 IPR036038 Aminotransferase-like, PLP-dependent enzymes GJQ55_06640 IPR018300 Aminotransferase, class IV, conserved site GJQ55_06640 IPR017824 Aminodeoxychorismate lyase, class IV GJQ55_06640 IPR001544 Aminotransferase class IV GJQ55_06645 IPR003770 Endolytic murein transglycosylase GJQ55_06650 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_06650 IPR039430 Thymidylate kinase-like domain GJQ55_06650 IPR018094 Thymidylate kinase GJQ55_06655 IPR004622 DNA polymerase III, delta prime subunit GJQ55_06655 IPR015199 DNA polymerase III, delta subunit, C-terminal GJQ55_06655 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_06665 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GJQ55_06665 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GJQ55_06665 IPR000192 Aminotransferase class V domain GJQ55_06665 IPR016454 Cysteine desulfurase GJQ55_06665 IPR015424 Pyridoxal phosphate-dependent transferase GJQ55_06665 IPR010970 Cysteine desulfurase, SufS GJQ55_06670 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GJQ55_06670 IPR011765 Peptidase M16, N-terminal GJQ55_06670 IPR007863 Peptidase M16, C-terminal GJQ55_06670 IPR013578 Peptidase M16C associated GJQ55_06680 IPR002898 MotA/TolQ/ExbB proton channel GJQ55_06685 IPR002898 MotA/TolQ/ExbB proton channel GJQ55_06690 IPR003400 Biopolymer transport protein ExbD/TolR GJQ55_06695 IPR003538 Gram-negative bacterial TonB protein GJQ55_06695 IPR006260 TonB/TolA, C-terminal GJQ55_06695 IPR037682 TonB, C-terminal GJQ55_06705 IPR005135 Endonuclease/exonuclease/phosphatase GJQ55_06705 IPR037493 Exodeoxyribonuclease III-like GJQ55_06705 IPR004808 AP endonuclease 1 GJQ55_06705 IPR036691 Endonuclease/exonuclease/phosphatase superfamily GJQ55_06705 IPR020847 AP endonuclease 1, binding site GJQ55_06705 IPR020848 AP endonuclease 1, conserved site GJQ55_06710 IPR037066 TonB-dependent receptor, plug domain superfamily GJQ55_06710 IPR010917 TonB-dependent receptor, conserved site GJQ55_06710 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily GJQ55_06710 IPR000531 TonB-dependent receptor-like, beta-barrel GJQ55_06710 IPR012910 TonB-dependent receptor, plug domain GJQ55_06710 IPR039426 Vitamin B12 transporter BtuB-like GJQ55_06710 IPR010105 TonB-dependent siderophore receptor GJQ55_06715 IPR003720 tRNA sulfurtransferase ThiI GJQ55_06715 IPR001763 Rhodanese-like domain GJQ55_06715 IPR020536 Thil, AANH domain GJQ55_06715 IPR036873 Rhodanese-like domain superfamily GJQ55_06715 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold GJQ55_06715 IPR026340 Thiazole biosynthesis domain GJQ55_06715 IPR004114 THUMP domain GJQ55_06720 IPR002104 Integrase, catalytic domain GJQ55_06720 IPR013762 Integrase-like, catalytic domain superfamily GJQ55_06720 IPR004107 Integrase, SAM-like, N-terminal GJQ55_06720 IPR011010 DNA breaking-rejoining enzyme, catalytic core GJQ55_06720 IPR023009 Tyrosine recombinase XerC/XerD GJQ55_06720 IPR010998 Integrase/recombinase, N-terminal GJQ55_06720 IPR011931 Tyrosine recombinase XerC GJQ55_06725 IPR029058 Alpha/Beta hydrolase fold GJQ55_06725 IPR022742 Serine aminopeptidase, S33 GJQ55_06730 IPR023772 DNA-binding HTH domain, TetR-type, conserved site GJQ55_06730 IPR009057 Homeobox-like domain superfamily GJQ55_06730 IPR001647 DNA-binding HTH domain, TetR-type GJQ55_06740 IPR003735 Metal-sensitive transcriptional repressor GJQ55_06740 IPR038390 Metal-sensitive transcriptional repressor superfamily GJQ55_06745 IPR036837 Cation efflux protein, cytoplasmic domain superfamily GJQ55_06745 IPR027469 Cation efflux transmembrane domain superfamily GJQ55_06745 IPR002524 Cation efflux protein GJQ55_06755 IPR014001 Helicase superfamily 1/2, ATP-binding domain GJQ55_06755 IPR001650 Helicase, C-terminal GJQ55_06755 IPR023949 RNA polymerase-associated protein RapA GJQ55_06755 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_06755 IPR022737 RNA polymerase recycling, bacterial, C-terminal GJQ55_06755 IPR038718 SNF2-like, N-terminal domain superfamily GJQ55_06755 IPR000330 SNF2-related, N-terminal domain GJQ55_06755 IPR040765 RapA, N-terminal Tudor like domain 1 GJQ55_06755 IPR040766 RapA, N-terminal Tudor-like domain 2 GJQ55_06760 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GJQ55_06760 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GJQ55_06760 IPR036188 FAD/NAD(P)-binding domain superfamily GJQ55_06760 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GJQ55_06760 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GJQ55_06760 IPR023753 FAD/NAD(P)-binding domain GJQ55_06775 IPR005628 General secretion pathway protein K GJQ55_06775 IPR038072 GspK, central domain superfamily GJQ55_06780 IPR010055 Type II secretion system protein J GJQ55_06780 IPR012902 Prokaryotic N-terminal methylation site GJQ55_06785 IPR003413 Type II secretion system protein I domain GJQ55_06785 IPR010052 Type II secretion system protein I GJQ55_06785 IPR012902 Prokaryotic N-terminal methylation site GJQ55_06790 IPR012902 Prokaryotic N-terminal methylation site GJQ55_06790 IPR022346 General secretion pathway, GspH GJQ55_06790 IPR002416 Type II secretion system protein H GJQ55_06795 IPR010054 General secretion pathway protein G GJQ55_06795 IPR012902 Prokaryotic N-terminal methylation site GJQ55_06795 IPR000983 Bacterial general secretion pathway protein G-type pilin GJQ55_06795 IPR013545 Type II secretion system protein G GJQ55_06800 IPR011850 General secretion pathway protein F GJQ55_06800 IPR001992 Type II secretion system conserved site GJQ55_06800 IPR018076 Type II secretion system F domain GJQ55_06800 IPR042094 Type II secretion system F domain superfamily GJQ55_06800 IPR003004 GspF/PilC family GJQ55_06805 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_06805 IPR001482 Type II/IV secretion system protein GJQ55_06805 IPR037257 General secretory system II, protein E, N-terminal superfamily GJQ55_06805 IPR013369 Type II secretion system GspE GJQ55_06805 IPR042181 Type II secretion system, protein E, N-terminal GJQ55_06810 IPR029035 DHS-like NAD/FAD-binding domain superfamily GJQ55_06810 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal GJQ55_06810 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GJQ55_06810 IPR033947 Electron transfer flavoprotein, alpha subunit, N-terminal GJQ55_06810 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal GJQ55_06810 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site GJQ55_06810 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold GJQ55_06815 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GJQ55_06815 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal GJQ55_06815 IPR012255 Electron transfer flavoprotein, beta subunit GJQ55_06815 IPR033948 Electron transfer flavoprotein, beta subunit, N-terminal GJQ55_06815 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold GJQ55_06820 IPR036188 FAD/NAD(P)-binding domain superfamily GJQ55_06820 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain GJQ55_06820 IPR040156 Electron transfer flavoprotein-ubiquinone oxidoreductase GJQ55_06825 IPR017726 Fe/S biogenesis protein NfuA GJQ55_06825 IPR000361 FeS cluster biogenesis GJQ55_06825 IPR034904 Fe-S cluster assembly domain superfamily GJQ55_06825 IPR035903 HesB-like domain superfamily GJQ55_06825 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GJQ55_06830 IPR011822 Cobalamin-dependent methionine synthase GJQ55_06830 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GJQ55_06830 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GJQ55_06830 IPR000489 Pterin-binding domain GJQ55_06830 IPR036594 Methionine synthase domain GJQ55_06830 IPR033706 Methionine synthase, B12-binding domain GJQ55_06830 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain GJQ55_06830 IPR003726 Homocysteine-binding domain GJQ55_06830 IPR011005 Dihydropteroate synthase-like GJQ55_06830 IPR036724 Cobalamin-binding domain superfamily GJQ55_06830 IPR006158 Cobalamin (vitamin B12)-binding domain GJQ55_06830 IPR036589 Homocysteine-binding domain superfamily GJQ55_06835 IPR002528 Multi antimicrobial extrusion protein GJQ55_06840 IPR030395 Glycerophosphodiester phosphodiesterase domain GJQ55_06840 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GJQ55_06845 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GJQ55_06845 IPR012798 Cobalamin (vitamin B12) biosynthesis CobG-like GJQ55_06845 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GJQ55_06845 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GJQ55_06845 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GJQ55_06855 IPR002142 Peptidase S49 GJQ55_06855 IPR013703 Peptidase S49, N-terminal proteobacteria GJQ55_06855 IPR029045 ClpP/crotonase-like domain superfamily GJQ55_06865 IPR007428 MlaA lipoprotein GJQ55_06870 IPR010222 RNA helicase HrpA GJQ55_06870 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_06870 IPR024590 RNA helicase HrpA, C-terminal GJQ55_06870 IPR001650 Helicase, C-terminal GJQ55_06870 IPR014001 Helicase superfamily 1/2, ATP-binding domain GJQ55_06870 IPR011709 Domain of unknown function DUF1605 GJQ55_06870 IPR011545 DEAD/DEAH box helicase domain GJQ55_06870 IPR003593 AAA+ ATPase domain GJQ55_06870 IPR007502 Helicase-associated domain GJQ55_06875 IPR020845 AMP-binding, conserved site GJQ55_06875 IPR000873 AMP-dependent synthetase/ligase GJQ55_06875 IPR042099 AMP-dependent synthetase-like superfamily GJQ55_06875 IPR025110 AMP-binding enzyme, C-terminal domain GJQ55_06880 IPR029058 Alpha/Beta hydrolase fold GJQ55_06880 IPR000073 Alpha/beta hydrolase fold-1 GJQ55_06880 IPR022742 Serine aminopeptidase, S33 GJQ55_06885 IPR029069 HotDog domain superfamily GJQ55_06885 IPR002539 MaoC-like dehydratase domain GJQ55_06945 IPR037219 Peptidase M41-like GJQ55_06945 IPR000642 Peptidase M41 GJQ55_06945 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_06945 IPR005936 Peptidase, FtsH GJQ55_06945 IPR003960 ATPase, AAA-type, conserved site GJQ55_06945 IPR003959 ATPase, AAA-type, core GJQ55_06945 IPR041569 AAA ATPase, AAA+ lid domain GJQ55_06945 IPR003593 AAA+ ATPase domain GJQ55_06965 IPR005358 Putative zinc- or iron-chelating domain containing protein GJQ55_06965 IPR008228 Uncharacterised conserved protein UCP006173 GJQ55_06970 IPR038068 YcgL-like superfamily GJQ55_06970 IPR027354 YcgL domain GJQ55_06975 IPR036397 Ribonuclease H superfamily GJQ55_06975 IPR012337 Ribonuclease H-like superfamily GJQ55_06975 IPR006292 Ribonuclease D GJQ55_06975 IPR002562 3'-5' exonuclease domain GJQ55_06975 IPR010997 HRDC-like superfamily GJQ55_06975 IPR002121 HRDC domain GJQ55_06980 IPR000093 DNA recombination protein RecR GJQ55_06980 IPR023627 Recombination protein RecR GJQ55_06980 IPR023628 Recombination protein RecR, C4-type zinc finger GJQ55_06980 IPR015967 Recombination protein RecR, conserved site GJQ55_06980 IPR006171 TOPRIM domain GJQ55_06980 IPR034137 RecR, TOPRIM domain GJQ55_06985 IPR004401 Nucleoid-associated protein YbaB/EbfC family GJQ55_06985 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily GJQ55_06990 IPR003593 AAA+ ATPase domain GJQ55_06990 IPR001270 ClpA/B family GJQ55_06990 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GJQ55_06990 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV GJQ55_06990 IPR022754 DNA polymerase III, gamma subunit, domain III GJQ55_06990 IPR012763 DNA polymerase III, subunit gamma/ tau GJQ55_06990 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily GJQ55_06990 IPR021029 DNA polymerase III, tau subunit, domain V GJQ55_06990 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_07005 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup GJQ55_07005 IPR027065 Lon protease GJQ55_07005 IPR020568 Ribosomal protein S5 domain 2-type fold GJQ55_07005 IPR041699 Lon protease, AAA domain GJQ55_07005 IPR008269 Peptidase S16, Lon proteolytic domain GJQ55_07010 IPR003594 Histidine kinase/HSP90-like ATPase GJQ55_07010 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GJQ55_07010 IPR005467 Histidine kinase domain GJQ55_07010 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GJQ55_07010 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GJQ55_07010 IPR036641 HPT domain superfamily GJQ55_07010 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GJQ55_07010 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GJQ55_07010 IPR001789 Signal transduction response regulator, receiver domain GJQ55_07010 IPR011006 CheY-like superfamily GJQ55_07035 IPR010386 tRNA-hydroxylase MiaE GJQ55_07035 IPR009078 Ferritin-like superfamily GJQ55_07035 IPR012347 Ferritin-like GJQ55_07040 IPR029069 HotDog domain superfamily GJQ55_07040 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GJQ55_07045 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GJQ55_07045 IPR002421 5'-3' exonuclease, N-terminal GJQ55_07045 IPR036279 5'-3' exonuclease, C-terminal domain superfamily GJQ55_07045 IPR020045 DNA polymerase I-like, H3TH domain GJQ55_07045 IPR038969 Flap endonuclease GJQ55_07045 IPR008918 Helix-hairpin-helix motif, class 2 GJQ55_07045 IPR029060 PIN-like domain superfamily GJQ55_07045 IPR022895 Flap endonuclease Xni GJQ55_07050 IPR003593 AAA+ ATPase domain GJQ55_07050 IPR003439 ABC transporter-like GJQ55_07050 IPR011527 ABC transporter type 1, transmembrane domain GJQ55_07050 IPR039421 Type I protein exporter GJQ55_07050 IPR036640 ABC transporter type 1, transmembrane domain superfamily GJQ55_07050 IPR017871 ABC transporter, conserved site GJQ55_07050 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_07065 IPR011545 DEAD/DEAH box helicase domain GJQ55_07065 IPR014001 Helicase superfamily 1/2, ATP-binding domain GJQ55_07065 IPR001650 Helicase, C-terminal GJQ55_07065 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_07065 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site GJQ55_07065 IPR023554 ATP-dependent RNA helicase RhlB type GJQ55_07065 IPR014014 RNA helicase, DEAD-box type, Q motif GJQ55_07070 IPR002528 Multi antimicrobial extrusion protein GJQ55_07070 IPR022913 Multidrug resistance protein MdtK GJQ55_07075 IPR036188 FAD/NAD(P)-binding domain superfamily GJQ55_07075 IPR023753 FAD/NAD(P)-binding domain GJQ55_07075 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GJQ55_07075 IPR009051 Alpha-helical ferredoxin GJQ55_07075 IPR028261 Dihydroprymidine dehydrogenase domain II GJQ55_07080 IPR020471 Aldo/keto reductase GJQ55_07080 IPR023210 NADP-dependent oxidoreductase domain GJQ55_07080 IPR036812 NADP-dependent oxidoreductase domain superfamily GJQ55_07085 IPR013766 Thioredoxin domain GJQ55_07085 IPR005746 Thioredoxin GJQ55_07085 IPR017937 Thioredoxin, conserved site GJQ55_07085 IPR036249 Thioredoxin-like superfamily GJQ55_07095 IPR002931 Transglutaminase-like GJQ55_07095 IPR021878 Protein-glutamine gamma-glutamyltransferase TgpA, N-terminal GJQ55_07095 IPR038765 Papain-like cysteine peptidase superfamily GJQ55_07095 IPR025403 Domain of unknown function DUF4129 GJQ55_07105 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_07105 IPR041628 ChlI/MoxR, AAA lid domain GJQ55_07105 IPR011703 ATPase, AAA-3 GJQ55_07110 IPR006234 O-succinylhomoserine sulfhydrylase GJQ55_07110 IPR015424 Pyridoxal phosphate-dependent transferase GJQ55_07110 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GJQ55_07110 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GJQ55_07110 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GJQ55_07115 IPR029055 Nucleophile aminohydrolases, N-terminal GJQ55_07115 IPR000836 Phosphoribosyltransferase domain GJQ55_07115 IPR029057 Phosphoribosyltransferase-like GJQ55_07115 IPR005854 Amidophosphoribosyltransferase GJQ55_07115 IPR035584 Amidophosphoribosyltransferase, N-terminal GJQ55_07115 IPR017932 Glutamine amidotransferase type 2 domain GJQ55_07120 IPR003825 Colicin V production, CvpA GJQ55_07130 IPR013221 Mur ligase, central GJQ55_07130 IPR036615 Mur ligase, C-terminal domain superfamily GJQ55_07130 IPR018109 Folylpolyglutamate synthetase, conserved site GJQ55_07130 IPR036565 Mur-like, catalytic domain superfamily GJQ55_07130 IPR001645 Folylpolyglutamate synthetase GJQ55_07130 IPR004101 Mur ligase, C-terminal GJQ55_07135 IPR013785 Aldolase-type TIM barrel GJQ55_07135 IPR011060 Ribulose-phosphate binding barrel GJQ55_07135 IPR018204 Tryptophan synthase, alpha chain, active site GJQ55_07135 IPR002028 Tryptophan synthase, alpha chain GJQ55_07140 IPR001926 Pyridoxal-phosphate dependent enzyme GJQ55_07140 IPR006653 Tryptophan synthase, beta chain, conserved site GJQ55_07140 IPR006654 Tryptophan synthase, beta chain GJQ55_07140 IPR023026 Tryptophan synthase beta chain/beta chain-like GJQ55_07140 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme GJQ55_07145 IPR013785 Aldolase-type TIM barrel GJQ55_07145 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GJQ55_07145 IPR011060 Ribulose-phosphate binding barrel GJQ55_07150 IPR001406 Pseudouridine synthase I, TruA GJQ55_07150 IPR020095 Pseudouridine synthase I, TruA, C-terminal GJQ55_07150 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GJQ55_07150 IPR020103 Pseudouridine synthase, catalytic domain superfamily GJQ55_07155 IPR018392 LysM domain GJQ55_07155 IPR036779 LysM domain superfamily GJQ55_07155 IPR020011 Motility protein FimV, C-terminal GJQ55_07155 IPR020012 Motility protein FimV, N-terminal GJQ55_07155 IPR011990 Tetratricopeptide-like helical domain superfamily GJQ55_07155 IPR038440 FimV, C-terminal domain superfamily GJQ55_07160 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GJQ55_07160 IPR036291 NAD(P)-binding domain superfamily GJQ55_07160 IPR012080 Aspartate-semialdehyde dehydrogenase GJQ55_07160 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type GJQ55_07160 IPR000534 Semialdehyde dehydrogenase, NAD-binding GJQ55_07160 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GJQ55_07165 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GJQ55_07165 IPR024084 Isopropylmalate dehydrogenase-like domain GJQ55_07165 IPR004429 Isopropylmalate dehydrogenase GJQ55_07170 IPR033940 3-isopropylmalate dehydratase, swivel domain GJQ55_07170 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GJQ55_07170 IPR004431 3-isopropylmalate dehydratase, small subunit GJQ55_07170 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel GJQ55_07175 IPR004430 3-isopropylmalate dehydratase, large subunit GJQ55_07175 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GJQ55_07175 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GJQ55_07175 IPR018136 Aconitase family, 4Fe-4S cluster binding site GJQ55_07175 IPR036008 Aconitase, iron-sulfur domain GJQ55_07175 IPR033941 3-Isopropylmalate dehydratase, catalytic domain GJQ55_07180 IPR000847 Transcription regulator HTH, LysR GJQ55_07180 IPR036388 Winged helix-like DNA-binding domain superfamily GJQ55_07180 IPR036390 Winged helix DNA-binding domain superfamily GJQ55_07185 IPR006016 UspA GJQ55_07190 IPR012147 Phosphate acetyl/butyryltransferase GJQ55_07190 IPR002505 Phosphate acetyl/butaryl transferase GJQ55_07205 IPR007848 Methyltransferase small domain GJQ55_07205 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase GJQ55_07205 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GJQ55_07205 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GJQ55_07220 IPR001539 Peptidase U32 GJQ55_07220 IPR032525 Peptidase family U32, C-terminal GJQ55_07225 IPR020103 Pseudouridine synthase, catalytic domain superfamily GJQ55_07225 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GJQ55_07225 IPR006145 Pseudouridine synthase, RsuA/RluA GJQ55_07240 IPR013078 Histidine phosphatase superfamily, clade-1 GJQ55_07240 IPR029033 Histidine phosphatase superfamily GJQ55_07250 IPR036291 NAD(P)-binding domain superfamily GJQ55_07250 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GJQ55_07250 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GJQ55_07250 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GJQ55_07250 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GJQ55_07250 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GJQ55_07260 IPR011006 CheY-like superfamily GJQ55_07260 IPR001867 OmpR/PhoB-type DNA-binding domain GJQ55_07260 IPR001789 Signal transduction response regulator, receiver domain GJQ55_07260 IPR039420 Transcriptional regulatory protein WalR-like GJQ55_07260 IPR036388 Winged helix-like DNA-binding domain superfamily GJQ55_07270 IPR036390 Winged helix DNA-binding domain superfamily GJQ55_07270 IPR036388 Winged helix-like DNA-binding domain superfamily GJQ55_07270 IPR000847 Transcription regulator HTH, LysR GJQ55_07270 IPR005119 LysR, substrate-binding GJQ55_07275 IPR013785 Aldolase-type TIM barrel GJQ55_07275 IPR006218 DAHP synthetase I/KDSA GJQ55_07275 IPR006219 DHAP synthase, class 1 GJQ55_07280 IPR016169 FAD-binding, type PCMH, subdomain 2 GJQ55_07280 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GJQ55_07280 IPR005170 Transporter-associated domain GJQ55_07280 IPR036318 FAD-binding, type PCMH-like superfamily GJQ55_07280 IPR006153 Cation/H+ exchanger GJQ55_07280 IPR006037 Regulator of K+ conductance, C-terminal GJQ55_07280 IPR038770 Sodium/solute symporter superfamily GJQ55_07280 IPR030151 K(+)/H(+) antiporter NhaP GJQ55_07280 IPR023729 K(+)/H(+) antiporter NhaP2 GJQ55_07285 IPR011006 CheY-like superfamily GJQ55_07285 IPR000160 GGDEF domain GJQ55_07285 IPR029787 Nucleotide cyclase GJQ55_07285 IPR001789 Signal transduction response regulator, receiver domain GJQ55_07315 IPR001789 Signal transduction response regulator, receiver domain GJQ55_07315 IPR011006 CheY-like superfamily GJQ55_07315 IPR003594 Histidine kinase/HSP90-like ATPase GJQ55_07315 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GJQ55_07315 IPR005467 Histidine kinase domain GJQ55_07315 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GJQ55_07315 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GJQ55_07315 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GJQ55_07320 IPR036390 Winged helix DNA-binding domain superfamily GJQ55_07320 IPR000835 MarR-type HTH domain GJQ55_07320 IPR036388 Winged helix-like DNA-binding domain superfamily GJQ55_07325 IPR000889 Glutathione peroxidase GJQ55_07325 IPR029759 Glutathione peroxidase active site GJQ55_07325 IPR029760 Glutathione peroxidase conserved site GJQ55_07325 IPR036249 Thioredoxin-like superfamily GJQ55_07330 IPR028427 Peptide methionine sulfoxide reductase GJQ55_07330 IPR002579 Peptide methionine sulphoxide reductase MrsB GJQ55_07330 IPR011057 Mss4-like superfamily GJQ55_07335 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GJQ55_07335 IPR004839 Aminotransferase, class I/classII GJQ55_07335 IPR015424 Pyridoxal phosphate-dependent transferase GJQ55_07335 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GJQ55_07345 IPR026045 Ferric binding protein GJQ55_07355 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_07355 IPR015853 ABC transporter, ferric cation import, FbpC GJQ55_07355 IPR041230 FbpC, C-terminal regulatory nucleotide binding domain GJQ55_07355 IPR003439 ABC transporter-like GJQ55_07355 IPR003593 AAA+ ATPase domain GJQ55_07355 IPR017871 ABC transporter, conserved site GJQ55_07360 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GJQ55_07360 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 GJQ55_07360 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GJQ55_07360 IPR020921 Erythronate-4-phosphate dehydrogenase GJQ55_07360 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain GJQ55_07360 IPR036291 NAD(P)-binding domain superfamily GJQ55_07360 IPR038251 PdxB, dimerisation domain superfamily GJQ55_07365 IPR006311 Twin-arginine translocation pathway, signal sequence GJQ55_07365 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GJQ55_07365 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GJQ55_07365 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE GJQ55_07365 IPR006657 Molybdopterin dinucleotide-binding domain GJQ55_07365 IPR009010 Aspartate decarboxylase-like domain superfamily GJQ55_07365 IPR006656 Molybdopterin oxidoreductase GJQ55_07370 IPR015933 Aconitase B, HEAT-like domain GJQ55_07370 IPR015929 Aconitase B, swivel GJQ55_07370 IPR015932 Aconitase, domain 2 GJQ55_07370 IPR036288 Aconitase B, HEAT-like domain superfamily GJQ55_07370 IPR004406 Aconitase B GJQ55_07370 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GJQ55_07370 IPR018136 Aconitase family, 4Fe-4S cluster binding site GJQ55_07370 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel GJQ55_07370 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GJQ55_07370 IPR036008 Aconitase, iron-sulfur domain GJQ55_07385 IPR010921 Trp repressor/replication initiator GJQ55_07385 IPR003593 AAA+ ATPase domain GJQ55_07385 IPR001957 Chromosomal replication control, initiator DnaA GJQ55_07385 IPR020591 Chromosomal replication control, initiator DnaA-like GJQ55_07385 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GJQ55_07385 IPR038454 DnaA, N-terminal domain superfamily GJQ55_07385 IPR013317 Chromosomal replication initiator protein DnaA GJQ55_07385 IPR013159 Chromosomal replication initiator, DnaA C-terminal GJQ55_07385 IPR024633 DnaA N-terminal domain GJQ55_07385 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_07390 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GJQ55_07390 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GJQ55_07390 IPR036008 Aconitase, iron-sulfur domain GJQ55_07390 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel GJQ55_07390 IPR006249 Aconitase/Iron-responsive element-binding protein 2 GJQ55_07390 IPR018136 Aconitase family, 4Fe-4S cluster binding site GJQ55_07390 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GJQ55_07395 IPR015932 Aconitase, domain 2 GJQ55_07395 IPR015929 Aconitase B, swivel GJQ55_07395 IPR015933 Aconitase B, HEAT-like domain GJQ55_07395 IPR004406 Aconitase B GJQ55_07395 IPR036008 Aconitase, iron-sulfur domain GJQ55_07395 IPR036288 Aconitase B, HEAT-like domain superfamily GJQ55_07395 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel GJQ55_07395 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GJQ55_07395 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GJQ55_07395 IPR018136 Aconitase family, 4Fe-4S cluster binding site GJQ55_07400 IPR002123 Phospholipid/glycerol acyltransferase GJQ55_07405 IPR029351 GAD domain GJQ55_07405 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GJQ55_07405 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GJQ55_07405 IPR006195 Aminoacyl-tRNA synthetase, class II GJQ55_07405 IPR004524 Aspartate-tRNA ligase, type 1 GJQ55_07405 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GJQ55_07405 IPR004115 GAD-like domain superfamily GJQ55_07405 IPR012340 Nucleic acid-binding, OB-fold GJQ55_07415 IPR017782 Hydroxyacylglutathione hydrolase GJQ55_07415 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain GJQ55_07415 IPR035680 Hydroxyacylglutathione hydrolase, MBL domain GJQ55_07415 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like GJQ55_07415 IPR001279 Metallo-beta-lactamase GJQ55_07440 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK GJQ55_07440 IPR041107 RimK, PreATP-grasp domain GJQ55_07440 IPR013815 ATP-grasp fold, subdomain 1 GJQ55_07440 IPR013651 ATP-grasp fold, RimK-type GJQ55_07440 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX GJQ55_07440 IPR011761 ATP-grasp fold GJQ55_07450 IPR041582 RimO, TRAM domain GJQ55_07450 IPR006638 Elp3/MiaB/NifB GJQ55_07450 IPR005839 Methylthiotransferase GJQ55_07450 IPR020612 Methylthiotransferase, conserved site GJQ55_07450 IPR013848 Methylthiotransferase, N-terminal GJQ55_07450 IPR038135 Methylthiotransferase, N-terminal domain superfamily GJQ55_07450 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GJQ55_07450 IPR007197 Radical SAM GJQ55_07450 IPR023404 Radical SAM, alpha/beta horseshoe GJQ55_07450 IPR002792 TRAM domain GJQ55_07455 IPR036986 RNA-binding S4 domain superfamily GJQ55_07455 IPR002942 RNA-binding S4 domain GJQ55_07455 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GJQ55_07455 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GJQ55_07455 IPR006145 Pseudouridine synthase, RsuA/RluA GJQ55_07455 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain GJQ55_07455 IPR020103 Pseudouridine synthase, catalytic domain superfamily GJQ55_07460 IPR001926 Pyridoxal-phosphate dependent enzyme GJQ55_07460 IPR006653 Tryptophan synthase, beta chain, conserved site GJQ55_07460 IPR006654 Tryptophan synthase, beta chain GJQ55_07460 IPR023026 Tryptophan synthase beta chain/beta chain-like GJQ55_07460 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme GJQ55_07460 IPR006316 Tryptophan synthase, beta chain-like GJQ55_07465 IPR004815 Lon protease, bacterial/eukaryotic-type GJQ55_07465 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_07465 IPR003111 Lon, substrate-binding domain GJQ55_07465 IPR027065 Lon protease GJQ55_07465 IPR008269 Peptidase S16, Lon proteolytic domain GJQ55_07465 IPR008268 Peptidase S16, active site GJQ55_07465 IPR027543 Lon protease, bacterial GJQ55_07465 IPR020568 Ribosomal protein S5 domain 2-type fold GJQ55_07465 IPR003593 AAA+ ATPase domain GJQ55_07465 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup GJQ55_07465 IPR003959 ATPase, AAA-type, core GJQ55_07465 IPR015947 PUA-like superfamily GJQ55_07470 IPR000868 Isochorismatase-like GJQ55_07470 IPR036380 Isochorismatase-like superfamily GJQ55_07475 IPR011008 Dimeric alpha-beta barrel GJQ55_07475 IPR006314 Dyp-type peroxidase GJQ55_07480 IPR016909 Ribosomal RNA large subunit methyltransferase F GJQ55_07480 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase GJQ55_07480 IPR010286 METTL16/RlmF family GJQ55_07485 IPR029062 Class I glutamine amidotransferase-like GJQ55_07485 IPR002818 DJ-1/PfpI GJQ55_07485 IPR009057 Homeobox-like domain superfamily GJQ55_07485 IPR018060 DNA binding HTH domain, AraC-type GJQ55_07485 IPR018062 HTH domain AraC-type, conserved site GJQ55_07485 IPR020449 Transcription regulator HTH, AraC- type GJQ55_07490 IPR024079 Metallopeptidase, catalytic domain superfamily GJQ55_07490 IPR010384 MtfA family GJQ55_07490 IPR042252 MtfA, N-terminal GJQ55_07495 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain GJQ55_07495 IPR016039 Thiolase-like GJQ55_07495 IPR000794 Beta-ketoacyl synthase GJQ55_07495 IPR014030 Beta-ketoacyl synthase, N-terminal GJQ55_07495 IPR014031 Beta-ketoacyl synthase, C-terminal GJQ55_07510 IPR001387 Cro/C1-type helix-turn-helix domain GJQ55_07510 IPR031807 HicB-like antitoxin of toxin-antitoxin system GJQ55_07510 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GJQ55_07510 IPR035069 TTHA1013/TTHA0281-like GJQ55_07525 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_07525 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GJQ55_07525 IPR021810 Protein of unknown function DUF3387 GJQ55_07525 IPR014001 Helicase superfamily 1/2, ATP-binding domain GJQ55_07525 IPR004473 Restriction endonuclease, type I, HsdR GJQ55_07525 IPR040980 SWI2/SNF2 ATPase GJQ55_07550 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain GJQ55_07550 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily GJQ55_07550 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase GJQ55_07550 IPR003356 DNA methylase, adenine-specific GJQ55_07550 IPR004546 Restriction endonuclease, type I, HsdM GJQ55_07550 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GJQ55_07555 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GJQ55_07555 IPR017938 Riboflavin synthase-like beta-barrel GJQ55_07555 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily GJQ55_07555 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain GJQ55_07555 IPR001433 Oxidoreductase FAD/NAD(P)-binding GJQ55_07555 IPR008254 Flavodoxin/nitric oxide synthase GJQ55_07555 IPR001094 Flavodoxin-like GJQ55_07555 IPR017927 FAD-binding domain, ferredoxin reductase-type GJQ55_07555 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding GJQ55_07555 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GJQ55_07555 IPR029039 Flavoprotein-like superfamily GJQ55_07575 IPR037066 TonB-dependent receptor, plug domain superfamily GJQ55_07575 IPR000531 TonB-dependent receptor-like, beta-barrel GJQ55_07575 IPR010916 TonB box, conserved site GJQ55_07575 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily GJQ55_07575 IPR010917 TonB-dependent receptor, conserved site GJQ55_07575 IPR039426 Vitamin B12 transporter BtuB-like GJQ55_07575 IPR012910 TonB-dependent receptor, plug domain GJQ55_07585 IPR023616 Cytochrome c oxidase-like, subunit I domain GJQ55_07585 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GJQ55_07585 IPR000883 Cytochrome c oxidase subunit I GJQ55_07585 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GJQ55_07585 IPR004677 Cytochrome c oxidase cbb3-type, subunit I GJQ55_07600 IPR008168 Cytochrome c, class IC GJQ55_07600 IPR038414 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal domain superfamily GJQ55_07600 IPR009056 Cytochrome c-like domain GJQ55_07600 IPR036909 Cytochrome c-like domain superfamily GJQ55_07600 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal GJQ55_07600 IPR004678 Cytochrome c oxidase cbb3-type, subunit III GJQ55_07605 IPR013783 Immunoglobulin-like fold GJQ55_07605 IPR032879 FixG, C-terminal immunoglobulin-like domain GJQ55_07605 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG GJQ55_07605 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site GJQ55_07605 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain GJQ55_07615 IPR036412 HAD-like superfamily GJQ55_07615 IPR008250 P-type ATPase, A domain superfamily GJQ55_07615 IPR023298 P-type ATPase, transmembrane domain superfamily GJQ55_07615 IPR001757 P-type ATPase GJQ55_07615 IPR027256 P-type ATPase, subfamily IB GJQ55_07615 IPR036163 Heavy metal-associated domain superfamily GJQ55_07615 IPR006121 Heavy metal-associated domain, HMA GJQ55_07615 IPR006122 Heavy metal-associated domain, copper ion-binding GJQ55_07615 IPR017969 Heavy-metal-associated, conserved site GJQ55_07615 IPR023214 HAD superfamily GJQ55_07615 IPR023299 P-type ATPase, cytoplasmic domain N GJQ55_07615 IPR018303 P-type ATPase, phosphorylation site GJQ55_07630 IPR036390 Winged helix DNA-binding domain superfamily GJQ55_07630 IPR036388 Winged helix-like DNA-binding domain superfamily GJQ55_07630 IPR018335 Transcription regulator HTH, Crp-type, conserved site GJQ55_07630 IPR014710 RmlC-like jelly roll fold GJQ55_07630 IPR012318 Crp-type HTH domain GJQ55_07630 IPR000595 Cyclic nucleotide-binding domain GJQ55_07630 IPR018490 Cyclic nucleotide-binding-like GJQ55_07635 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase GJQ55_07635 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal GJQ55_07635 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold GJQ55_07635 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type GJQ55_07645 IPR023459 Transcription elongation factor GreA/GreB family GJQ55_07645 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GJQ55_07645 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GJQ55_07645 IPR028624 Transcription elongation factor GreA/GreB GJQ55_07645 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GJQ55_07645 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GJQ55_07645 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GJQ55_07645 IPR006358 Transcription elongation factor GreB GJQ55_07650 IPR018253 DnaJ domain, conserved site GJQ55_07650 IPR008971 HSP40/DnaJ peptide-binding GJQ55_07650 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GJQ55_07650 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily GJQ55_07650 IPR036869 Chaperone J-domain superfamily GJQ55_07650 IPR012724 Chaperone DnaJ GJQ55_07650 IPR002939 Chaperone DnaJ, C-terminal GJQ55_07650 IPR001623 DnaJ domain GJQ55_07670 IPR006690 Outer membrane protein, OmpA-like, conserved site GJQ55_07670 IPR036737 OmpA-like domain superfamily GJQ55_07670 IPR006664 Outer membrane protein, bacterial GJQ55_07670 IPR006665 OmpA-like domain GJQ55_07680 IPR036065 BolA-like superfamily GJQ55_07680 IPR002634 BolA protein GJQ55_07695 IPR016478 GTPase, MTG1 GJQ55_07695 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_07695 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain GJQ55_07695 IPR023179 GTP-binding protein, orthogonal bundle domain superfamily GJQ55_07695 IPR019991 GTP-binding protein, ribosome biogenesis GJQ55_07695 IPR006073 GTP binding domain GJQ55_07705 IPR001279 Metallo-beta-lactamase GJQ55_07705 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like GJQ55_07710 IPR036388 Winged helix-like DNA-binding domain superfamily GJQ55_07710 IPR036390 Winged helix DNA-binding domain superfamily GJQ55_07710 IPR001845 HTH ArsR-type DNA-binding domain GJQ55_07710 IPR011991 ArsR-like helix-turn-helix domain GJQ55_07715 IPR002645 STAS domain GJQ55_07715 IPR036513 STAS domain superfamily GJQ55_07715 IPR011547 SLC26A/SulP transporter domain GJQ55_07715 IPR001902 SLC26A/SulP transporter GJQ55_07740 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_07740 IPR022488 Polyphosphate kinase-2-related GJQ55_07740 IPR022486 Polyphosphate kinase 2, PA0141 GJQ55_07745 IPR029787 Nucleotide cyclase GJQ55_07745 IPR000160 GGDEF domain GJQ55_07745 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GJQ55_07750 IPR018187 Asp/Glu racemase, active site 1 GJQ55_07750 IPR033134 Asp/Glu racemase, active site 2 GJQ55_07750 IPR004391 Glutamate racemase GJQ55_07750 IPR001920 Asp/Glu racemase GJQ55_07750 IPR015942 Asp/Glu/hydantoin racemase GJQ55_07755 IPR018234 GTP cyclohydrolase I, conserved site GJQ55_07755 IPR020602 GTP cyclohydrolase I domain GJQ55_07755 IPR001474 GTP cyclohydrolase I GJQ55_07760 IPR027379 Cardiolipin synthase N-terminal GJQ55_07760 IPR025202 Phospholipase D-like domain GJQ55_07760 IPR001736 Phospholipase D/Transphosphatidylase GJQ55_07760 IPR022924 Cardiolipin synthase GJQ55_07760 IPR030840 Cardiolipin synthase A GJQ55_07765 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GJQ55_07765 IPR005618 Outer membrane protein, OmpW GJQ55_07775 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain GJQ55_07775 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GJQ55_07775 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GJQ55_07775 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GJQ55_07775 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GJQ55_07775 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GJQ55_07775 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GJQ55_07780 IPR011008 Dimeric alpha-beta barrel GJQ55_07780 IPR014910 Putative monooxygenase YdhR GJQ55_07785 IPR025110 AMP-binding enzyme, C-terminal domain GJQ55_07785 IPR020845 AMP-binding, conserved site GJQ55_07785 IPR000873 AMP-dependent synthetase/ligase GJQ55_07785 IPR042099 AMP-dependent synthetase-like superfamily GJQ55_07790 IPR005804 Fatty acid desaturase domain GJQ55_07790 IPR012171 Fatty acid desaturase GJQ55_07800 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GJQ55_07800 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GJQ55_07800 IPR038071 UROD/MetE-like superfamily GJQ55_07800 IPR006276 Cobalamin-independent methionine synthase GJQ55_07820 IPR009061 Putative DNA-binding domain superfamily GJQ55_07820 IPR011788 Zn(II)-responsive transcriptional regulator GJQ55_07820 IPR000551 MerR-type HTH domain GJQ55_07825 IPR013515 Phytochrome, central region GJQ55_07825 IPR001294 Phytochrome GJQ55_07825 IPR001633 EAL domain GJQ55_07825 IPR029787 Nucleotide cyclase GJQ55_07825 IPR000160 GGDEF domain GJQ55_07825 IPR029016 GAF-like domain superfamily GJQ55_07825 IPR003018 GAF domain GJQ55_07825 IPR016132 Phytochrome chromophore attachment domain GJQ55_07825 IPR035919 EAL domain superfamily GJQ55_07830 IPR011054 Rudiment single hybrid motif GJQ55_07830 IPR011761 ATP-grasp fold GJQ55_07830 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type GJQ55_07830 IPR016185 Pre-ATP-grasp domain superfamily GJQ55_07830 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GJQ55_07830 IPR013815 ATP-grasp fold, subdomain 1 GJQ55_07840 IPR001451 Hexapeptide repeat GJQ55_07840 IPR011004 Trimeric LpxA-like superfamily GJQ55_07845 IPR000086 NUDIX hydrolase domain GJQ55_07845 IPR023735 Uncharacterised nudix hydrolase NudL GJQ55_07845 IPR000059 NUDIX hydrolase, NudL, conserved site GJQ55_07845 IPR015797 NUDIX hydrolase-like domain superfamily GJQ55_07850 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal GJQ55_07850 IPR017221 GTP cyclohydrolase 1 type 2//Nif3, bacteria GJQ55_07850 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily GJQ55_07850 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 GJQ55_07855 IPR033479 Double Cache domain 1 GJQ55_07855 IPR003660 HAMP domain GJQ55_07855 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GJQ55_07855 IPR029151 Periplasmic sensor-like domain superfamily GJQ55_07855 IPR000727 Target SNARE coiled-coil homology domain GJQ55_07855 IPR004090 Chemotaxis methyl-accepting receptor GJQ55_07860 IPR005358 Putative zinc- or iron-chelating domain containing protein GJQ55_07875 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GJQ55_07875 IPR020103 Pseudouridine synthase, catalytic domain superfamily GJQ55_07875 IPR006508 Pseudouridine synthase, RluA-like GJQ55_07875 IPR006145 Pseudouridine synthase, RsuA/RluA GJQ55_07885 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GJQ55_07885 IPR001036 Acriflavin resistance protein GJQ55_07885 IPR022831 Multidrug resistance protein MdtB GJQ55_07890 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) GJQ55_07890 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GJQ55_07890 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GJQ55_07890 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GJQ55_07890 IPR029151 Periplasmic sensor-like domain superfamily GJQ55_07890 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GJQ55_07890 IPR003594 Histidine kinase/HSP90-like ATPase GJQ55_07890 IPR033479 Double Cache domain 1 GJQ55_07890 IPR005467 Histidine kinase domain GJQ55_07895 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GJQ55_07895 IPR001036 Acriflavin resistance protein GJQ55_07895 IPR022831 Multidrug resistance protein MdtB GJQ55_07905 IPR003423 Outer membrane efflux protein GJQ55_07905 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GJQ55_07910 IPR029057 Phosphoribosyltransferase-like GJQ55_07910 IPR000836 Phosphoribosyltransferase domain GJQ55_07910 IPR005904 Hypoxanthine phosphoribosyl transferase GJQ55_07915 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GJQ55_07915 IPR036264 Bacterial exopeptidase dimerisation domain GJQ55_07915 IPR002933 Peptidase M20 GJQ55_07915 IPR011650 Peptidase M20, dimerisation domain GJQ55_07915 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GJQ55_07920 IPR025714 Methyltransferase domain GJQ55_07920 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase GJQ55_07920 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted GJQ55_07935 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GJQ55_07935 IPR033705 Valyl tRNA synthetase, anticodon-binding domain GJQ55_07935 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GJQ55_07935 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold GJQ55_07935 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GJQ55_07935 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GJQ55_07935 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GJQ55_07935 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GJQ55_07935 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GJQ55_07935 IPR002300 Aminoacyl-tRNA synthetase, class Ia GJQ55_07935 IPR002303 Valine-tRNA ligase GJQ55_07960 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA-type GJQ55_07960 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GJQ55_08025 IPR007235 Glycosyl transferase, family 28, C-terminal GJQ55_08025 IPR006326 UDP-glycosyltransferase, MGT GJQ55_08055 IPR011010 DNA breaking-rejoining enzyme, catalytic core GJQ55_08055 IPR013762 Integrase-like, catalytic domain superfamily GJQ55_08055 IPR002104 Integrase, catalytic domain GJQ55_08055 IPR011946 Integrase, integron-type GJQ55_08055 IPR004107 Integrase, SAM-like, N-terminal GJQ55_08055 IPR010998 Integrase/recombinase, N-terminal GJQ55_08060 IPR002303 Valine-tRNA ligase GJQ55_08060 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GJQ55_08060 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GJQ55_08060 IPR002300 Aminoacyl-tRNA synthetase, class Ia GJQ55_08060 IPR033705 Valyl tRNA synthetase, anticodon-binding domain GJQ55_08060 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GJQ55_08060 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold GJQ55_08060 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GJQ55_08060 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GJQ55_08060 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GJQ55_08060 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GJQ55_08065 IPR029028 Alpha/beta knot methyltransferases GJQ55_08065 IPR004384 RNA methyltransferase TrmJ/LasT GJQ55_08065 IPR001537 tRNA/rRNA methyltransferase, SpoU type GJQ55_08065 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal GJQ55_08075 IPR019793 Peroxidases heam-ligand binding site GJQ55_08075 IPR019794 Peroxidase, active site GJQ55_08075 IPR002016 Haem peroxidase GJQ55_08075 IPR000763 Catalase-peroxidase haem GJQ55_08075 IPR010255 Haem peroxidase superfamily GJQ55_08080 IPR000390 Small multidrug resistance protein family GJQ55_08085 IPR033674 Thioredoxin/glutathione peroxidase BtuE GJQ55_08085 IPR000889 Glutathione peroxidase GJQ55_08085 IPR029759 Glutathione peroxidase active site GJQ55_08085 IPR029760 Glutathione peroxidase conserved site GJQ55_08085 IPR036249 Thioredoxin-like superfamily GJQ55_08100 IPR006213 Bax inhibitor 1, conserved site GJQ55_08100 IPR006214 Bax inhibitor 1-related GJQ55_08105 IPR038404 TRAP transporter solute receptor DctP superfamily GJQ55_08110 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase GJQ55_08110 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GJQ55_08110 IPR007473 Ribosomal RNA large subunit methyltransferase J GJQ55_08115 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial GJQ55_08115 IPR022645 Protein-export membrane protein SecD/SecF, bacterial GJQ55_08115 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site GJQ55_08115 IPR005665 Protein-export membrane protein SecF, bacterial GJQ55_08120 IPR022645 Protein-export membrane protein SecD/SecF, bacterial GJQ55_08120 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site GJQ55_08120 IPR027398 SecD export protein N-terminal TM domain GJQ55_08120 IPR005791 Protein translocase subunit SecD GJQ55_08120 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial GJQ55_08125 IPR003849 Preprotein translocase YajC GJQ55_08130 IPR002616 tRNA-guanine(15) transglycosylase-like GJQ55_08130 IPR004803 tRNA-guanine transglycosylase GJQ55_08130 IPR036511 Queuine tRNA-ribosyltransferase-like GJQ55_08135 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily GJQ55_08135 IPR042119 QueA, domain 2 GJQ55_08135 IPR042118 QueA, domain 1 GJQ55_08135 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GJQ55_08160 IPR029151 Periplasmic sensor-like domain superfamily GJQ55_08160 IPR033463 Single cache domain 3 GJQ55_08160 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GJQ55_08160 IPR003660 HAMP domain GJQ55_08160 IPR004090 Chemotaxis methyl-accepting receptor GJQ55_08165 IPR001633 EAL domain GJQ55_08165 IPR001294 Phytochrome GJQ55_08165 IPR016132 Phytochrome chromophore attachment domain GJQ55_08165 IPR029787 Nucleotide cyclase GJQ55_08165 IPR000160 GGDEF domain GJQ55_08165 IPR029016 GAF-like domain superfamily GJQ55_08165 IPR003018 GAF domain GJQ55_08165 IPR035919 EAL domain superfamily GJQ55_08165 IPR013515 Phytochrome, central region GJQ55_08170 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GJQ55_08170 IPR023555 Thiol-disulphide oxidoreductase ResA GJQ55_08170 IPR013766 Thioredoxin domain GJQ55_08170 IPR036249 Thioredoxin-like superfamily GJQ55_08175 IPR036291 NAD(P)-binding domain superfamily GJQ55_08175 IPR002347 Short-chain dehydrogenase/reductase SDR GJQ55_08175 IPR020904 Short-chain dehydrogenase/reductase, conserved site GJQ55_08180 IPR001018 Beta-lactamase, class-B, conserved site GJQ55_08180 IPR001279 Metallo-beta-lactamase GJQ55_08180 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like GJQ55_08185 IPR005654 ATPase, AFG1-like GJQ55_08185 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_08185 IPR030870 Cell division protein ZapE GJQ55_08190 IPR029058 Alpha/Beta hydrolase fold GJQ55_08190 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GJQ55_08195 IPR002500 Phosphoadenosine phosphosulphate reductase GJQ55_08195 IPR011784 Sulphate adenylyltransferase, small subunit GJQ55_08195 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold GJQ55_08200 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_08200 IPR031157 Tr-type G domain, conserved site GJQ55_08200 IPR041757 Sulfate adenylyltransferase subunit CysN, GTP-binding domain GJQ55_08200 IPR002891 Adenylyl-sulfate kinase GJQ55_08200 IPR011779 Sulphate adenylyltransferase, large subunit GJQ55_08200 IPR005225 Small GTP-binding protein domain GJQ55_08200 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal GJQ55_08200 IPR009000 Translation protein, beta-barrel domain superfamily GJQ55_08200 IPR000795 Transcription factor, GTP-binding domain GJQ55_08210 IPR011009 Protein kinase-like domain superfamily GJQ55_08210 IPR016477 Fructosamine/Ketosamine-3-kinase GJQ55_08215 IPR012349 FMN-binding split barrel GJQ55_08215 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal GJQ55_08215 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative GJQ55_08215 IPR000659 Pyridoxamine 5'-phosphate oxidase GJQ55_08215 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GJQ55_08225 IPR030923 LPS export ABC transporter permease LptG GJQ55_08225 IPR005495 Permease LptG/LptF-related GJQ55_08230 IPR030922 LPS export ABC transporter permease LptF GJQ55_08230 IPR005495 Permease LptG/LptF-related GJQ55_08235 IPR023042 Peptidase M17, leucine aminopeptidase GJQ55_08235 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GJQ55_08235 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GJQ55_08235 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GJQ55_08240 IPR000415 Nitroreductase-like GJQ55_08240 IPR029479 Nitroreductase GJQ55_08245 IPR001789 Signal transduction response regulator, receiver domain GJQ55_08245 IPR029787 Nucleotide cyclase GJQ55_08245 IPR011006 CheY-like superfamily GJQ55_08245 IPR000160 GGDEF domain GJQ55_08255 IPR036291 NAD(P)-binding domain superfamily GJQ55_08255 IPR020904 Short-chain dehydrogenase/reductase, conserved site GJQ55_08255 IPR002347 Short-chain dehydrogenase/reductase SDR GJQ55_08265 IPR017927 FAD-binding domain, ferredoxin reductase-type GJQ55_08265 IPR017938 Riboflavin synthase-like beta-barrel GJQ55_08265 IPR001433 Oxidoreductase FAD/NAD(P)-binding GJQ55_08265 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain GJQ55_08265 IPR036010 2Fe-2S ferredoxin-like superfamily GJQ55_08265 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GJQ55_08265 IPR012675 Beta-grasp domain superfamily GJQ55_08265 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain GJQ55_08265 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GJQ55_08270 IPR003667 NqrDE/RnfAE GJQ55_08270 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GJQ55_08275 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GJQ55_08275 IPR003667 NqrDE/RnfAE GJQ55_08280 IPR007329 FMN-binding GJQ55_08280 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GJQ55_08285 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GJQ55_08285 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GJQ55_08290 IPR022615 Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain GJQ55_08290 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GJQ55_08295 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GJQ55_08295 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GJQ55_08295 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GJQ55_08295 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GJQ55_08295 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GJQ55_08295 IPR036291 NAD(P)-binding domain superfamily GJQ55_08300 IPR003711 CarD-like/TRCF domain GJQ55_08300 IPR036101 CarD-like/TRCF domain superfamily GJQ55_08300 IPR014001 Helicase superfamily 1/2, ATP-binding domain GJQ55_08300 IPR001650 Helicase, C-terminal GJQ55_08300 IPR004576 Transcription-repair coupling factor GJQ55_08300 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_08300 IPR037235 TRCF-like, C-terminal domain GJQ55_08300 IPR005118 Transcription-repair-coupling factor, C-terminal domain GJQ55_08300 IPR041471 UvrB, interaction domain GJQ55_08300 IPR011545 DEAD/DEAH box helicase domain GJQ55_08310 IPR010044 Methylthioadenosine phosphorylase (MTAP) GJQ55_08310 IPR000845 Nucleoside phosphorylase domain GJQ55_08310 IPR035994 Nucleoside phosphorylase superfamily GJQ55_08310 IPR018099 Purine phosphorylase, family 2, conserved site GJQ55_08315 IPR001764 Glycoside hydrolase, family 3, N-terminal GJQ55_08315 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GJQ55_08315 IPR017853 Glycoside hydrolase superfamily GJQ55_08315 IPR022956 Beta-hexosaminidase, bacterial GJQ55_08315 IPR019800 Glycoside hydrolase, family 3, active site GJQ55_08325 IPR009057 Homeobox-like domain superfamily GJQ55_08325 IPR023772 DNA-binding HTH domain, TetR-type, conserved site GJQ55_08325 IPR001647 DNA-binding HTH domain, TetR-type GJQ55_08330 IPR039418 LexA-like GJQ55_08330 IPR036286 LexA/Signal peptidase-like superfamily GJQ55_08330 IPR006199 LexA repressor, DNA-binding domain GJQ55_08330 IPR006197 Peptidase S24, LexA-like GJQ55_08330 IPR015927 Peptidase S24/S26A/S26B/S26C GJQ55_08330 IPR036388 Winged helix-like DNA-binding domain superfamily GJQ55_08330 IPR036390 Winged helix DNA-binding domain superfamily GJQ55_08330 IPR006200 Transcription regulator LexA GJQ55_08335 IPR004596 Cell division suppressor protein, SulA GJQ55_08335 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_08355 IPR003594 Histidine kinase/HSP90-like ATPase GJQ55_08355 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GJQ55_08355 IPR019805 Heat shock protein Hsp90, conserved site GJQ55_08355 IPR001404 Heat shock protein Hsp90 family GJQ55_08355 IPR020575 Heat shock protein Hsp90, N-terminal GJQ55_08355 IPR020568 Ribosomal protein S5 domain 2-type fold GJQ55_08355 IPR037196 HSP90, C-terminal domain GJQ55_08360 IPR013785 Aldolase-type TIM barrel GJQ55_08360 IPR036206 Thiamin phosphate synthase superfamily GJQ55_08360 IPR022998 Thiamine phosphate synthase/TenI GJQ55_08360 IPR034291 Thiamine phosphate synthase GJQ55_08365 IPR033983 Thiazole synthase ThiG GJQ55_08365 IPR008867 Thiazole synthase GJQ55_08365 IPR013785 Aldolase-type TIM barrel GJQ55_08375 IPR023209 D-amino-acid oxidase GJQ55_08375 IPR006076 FAD dependent oxidoreductase GJQ55_08375 IPR036188 FAD/NAD(P)-binding domain superfamily GJQ55_08375 IPR012727 Glycine oxidase ThiO GJQ55_08380 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GJQ55_08380 IPR037509 Phosphomethylpyrimidine synthase GJQ55_08380 IPR025747 ThiC-associated domain GJQ55_08380 IPR038521 ThiC/Bza superfamily GJQ55_08410 IPR018062 HTH domain AraC-type, conserved site GJQ55_08410 IPR018060 DNA binding HTH domain, AraC-type GJQ55_08410 IPR020449 Transcription regulator HTH, AraC- type GJQ55_08410 IPR009057 Homeobox-like domain superfamily GJQ55_08410 IPR003313 AraC-type arabinose-binding/dimerisation domain GJQ55_08410 IPR037923 Transcription regulator HTH-like GJQ55_08415 IPR000887 KDPG/KHG aldolase GJQ55_08415 IPR013785 Aldolase-type TIM barrel GJQ55_08415 IPR031337 KDPG/KHG aldolase, active site 1 GJQ55_08415 IPR031338 KDPG/KHG aldolase, active site 2 GJQ55_08420 IPR037237 IlvD/EDD, N-terminal domain GJQ55_08420 IPR004786 6-phosphogluconate dehydratase GJQ55_08420 IPR042096 Dihydroxy-acid dehydratase, C-terminal GJQ55_08420 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GJQ55_08420 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GJQ55_08425 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GJQ55_08425 IPR037171 NagB/RpiA transferase-like GJQ55_08425 IPR005900 6-phosphogluconolactonase, DevB-type GJQ55_08425 IPR039104 6-Phosphogluconolactonase GJQ55_08430 IPR001282 Glucose-6-phosphate dehydrogenase GJQ55_08430 IPR019796 Glucose-6-phosphate dehydrogenase, active site GJQ55_08430 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GJQ55_08430 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GJQ55_08430 IPR036291 NAD(P)-binding domain superfamily GJQ55_08440 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GJQ55_08440 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GJQ55_08440 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GJQ55_08460 IPR028923 SAICAR synthetase/ADE2, N-terminal GJQ55_08460 IPR033934 Bacterial and archaeal 5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide synthase GJQ55_08460 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GJQ55_08460 IPR018236 SAICAR synthetase, conserved site GJQ55_08465 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like GJQ55_08465 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain GJQ55_08465 IPR022712 Beta-Casp domain GJQ55_08465 IPR001279 Metallo-beta-lactamase GJQ55_08475 IPR020625 Schiff base-forming aldolase, active site GJQ55_08475 IPR013785 Aldolase-type TIM barrel GJQ55_08475 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GJQ55_08475 IPR002220 DapA-like GJQ55_08475 IPR020624 Schiff base-forming aldolase, conserved site GJQ55_08480 IPR002549 Transmembrane protein TqsA-like GJQ55_08485 IPR036868 TusA-like domain superfamily GJQ55_08485 IPR001455 TusA-like domain GJQ55_08485 IPR022931 Sulfur carrier protein TusA GJQ55_08490 IPR030873 Beta-barrel assembly-enhancing protease GJQ55_08490 IPR011716 Tetratricopeptide TPR-3 GJQ55_08490 IPR001915 Peptidase M48 GJQ55_08490 IPR011990 Tetratricopeptide-like helical domain superfamily GJQ55_08495 IPR003473 Quinolinate synthetase A GJQ55_08495 IPR036094 Quinolinate synthetase A superfamily GJQ55_08495 IPR023513 Quinolinate synthase A, type 1 GJQ55_08510 IPR032519 YbgF, trimerisation domain GJQ55_08510 IPR011990 Tetratricopeptide-like helical domain superfamily GJQ55_08510 IPR013026 Tetratricopeptide repeat-containing domain GJQ55_08510 IPR034706 Cell division coordinator CpoB GJQ55_08510 IPR039565 Outer membrane lipoprotein BamD-like GJQ55_08510 IPR014162 Cell division coordinator CpoB, C-terminal GJQ55_08515 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal GJQ55_08515 IPR039001 Peptidoglycan-associated lipoprotein GJQ55_08515 IPR006664 Outer membrane protein, bacterial GJQ55_08515 IPR006690 Outer membrane protein, OmpA-like, conserved site GJQ55_08515 IPR006665 OmpA-like domain GJQ55_08515 IPR036737 OmpA-like domain superfamily GJQ55_08520 IPR011042 Six-bladed beta-propeller, TolB-like GJQ55_08520 IPR014167 Tol-Pal system protein TolB GJQ55_08520 IPR007195 TolB, N-terminal GJQ55_08520 IPR036752 TolB, N-terminal domain superfamily GJQ55_08520 IPR011659 WD40-like Beta Propeller GJQ55_08530 IPR003400 Biopolymer transport protein ExbD/TolR GJQ55_08530 IPR014168 Tol-Pal system protein TolR GJQ55_08535 IPR002898 MotA/TolQ/ExbB proton channel GJQ55_08535 IPR014163 Tol-Pal system, TolQ GJQ55_08540 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GJQ55_08540 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GJQ55_08540 IPR006683 Thioesterase domain GJQ55_08540 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site GJQ55_08540 IPR029069 HotDog domain superfamily GJQ55_08545 IPR036390 Winged helix DNA-binding domain superfamily GJQ55_08545 IPR036388 Winged helix-like DNA-binding domain superfamily GJQ55_08545 IPR008823 RuvB C-terminal winged helix domain GJQ55_08545 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_08545 IPR004605 DNA helicase, Holliday junction RuvB-type GJQ55_08545 IPR041445 RuvB, AAA lid domain GJQ55_08545 IPR003593 AAA+ ATPase domain GJQ55_08545 IPR008824 RuvB-like P-loop domain GJQ55_08550 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GJQ55_08550 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GJQ55_08550 IPR012340 Nucleic acid-binding, OB-fold GJQ55_08550 IPR000085 Bacterial DNA recombination protein RuvA GJQ55_08550 IPR010994 RuvA domain 2-like GJQ55_08550 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GJQ55_08550 IPR036267 RuvA, C-terminal domain superfamily GJQ55_08555 IPR002176 Crossover junction endodeoxyribonuclease RuvC GJQ55_08555 IPR012337 Ribonuclease H-like superfamily GJQ55_08555 IPR036397 Ribonuclease H superfamily GJQ55_08555 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GJQ55_08565 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_08565 IPR018368 ClpA/B, conserved site 1 GJQ55_08565 IPR028299 ClpA/B, conserved site 2 GJQ55_08565 IPR001270 ClpA/B family GJQ55_08565 IPR041546 ClpA/ClpB, AAA lid domain GJQ55_08565 IPR036628 Clp, N-terminal domain superfamily GJQ55_08565 IPR019489 Clp ATPase, C-terminal GJQ55_08565 IPR017730 Chaperonin ClpB GJQ55_08565 IPR003959 ATPase, AAA-type, core GJQ55_08565 IPR004176 Clp, N-terminal GJQ55_08565 IPR003593 AAA+ ATPase domain GJQ55_08575 IPR000847 Transcription regulator HTH, LysR GJQ55_08575 IPR036388 Winged helix-like DNA-binding domain superfamily GJQ55_08575 IPR036390 Winged helix DNA-binding domain superfamily GJQ55_08575 IPR005119 LysR, substrate-binding GJQ55_08585 IPR040573 Tail specific protease, N-terminal domain GJQ55_08585 IPR020992 Tail specific protease, C-terminal GJQ55_08585 IPR029045 ClpP/crotonase-like domain superfamily GJQ55_08585 IPR036034 PDZ superfamily GJQ55_08585 IPR001478 PDZ domain GJQ55_08585 IPR005151 Tail specific protease GJQ55_08585 IPR004447 C-terminal-processing peptidase S41A GJQ55_08590 IPR001455 TusA-like domain GJQ55_08590 IPR036868 TusA-like domain superfamily GJQ55_08590 IPR022931 Sulfur carrier protein TusA GJQ55_08595 IPR012806 Acetyl-CoA C-acyltransferase FadI GJQ55_08595 IPR002155 Thiolase GJQ55_08595 IPR020615 Thiolase, acyl-enzyme intermediate active site GJQ55_08595 IPR020610 Thiolase, active site GJQ55_08595 IPR020617 Thiolase, C-terminal GJQ55_08595 IPR020613 Thiolase, conserved site GJQ55_08595 IPR020616 Thiolase, N-terminal GJQ55_08595 IPR016039 Thiolase-like GJQ55_08600 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GJQ55_08600 IPR020904 Short-chain dehydrogenase/reductase, conserved site GJQ55_08600 IPR002347 Short-chain dehydrogenase/reductase SDR GJQ55_08600 IPR036291 NAD(P)-binding domain superfamily GJQ55_08605 IPR001633 EAL domain GJQ55_08605 IPR029787 Nucleotide cyclase GJQ55_08605 IPR035919 EAL domain superfamily GJQ55_08605 IPR000160 GGDEF domain GJQ55_08605 IPR005330 MHYT domain GJQ55_08625 IPR011545 DEAD/DEAH box helicase domain GJQ55_08625 IPR007502 Helicase-associated domain GJQ55_08625 IPR014001 Helicase superfamily 1/2, ATP-binding domain GJQ55_08625 IPR001650 Helicase, C-terminal GJQ55_08625 IPR010225 ATP-dependent helicase HrpB GJQ55_08625 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_08625 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal GJQ55_08640 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily GJQ55_08640 IPR001783 Lumazine-binding protein GJQ55_08640 IPR026017 Lumazine-binding domain GJQ55_08640 IPR017938 Riboflavin synthase-like beta-barrel GJQ55_08645 IPR002641 Patatin-like phospholipase domain GJQ55_08645 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GJQ55_08665 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GJQ55_08665 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GJQ55_08665 IPR000241 Putative RNA methylase domain GJQ55_08665 IPR019614 S-adenosylmethionine-dependent methyltransferase GJQ55_08665 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase GJQ55_08665 IPR004114 THUMP domain GJQ55_08670 IPR007040 Ribosome modulation factor GJQ55_08670 IPR023200 Ribosome modulation factor domain superfamily GJQ55_08675 IPR013785 Aldolase-type TIM barrel GJQ55_08675 IPR005720 Dihydroorotate dehydrogenase domain GJQ55_08675 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GJQ55_08675 IPR005719 Dihydroorotate dehydrogenase, class 2 GJQ55_08675 IPR001295 Dihydroorotate dehydrogenase, conserved site GJQ55_08685 IPR007780 NAD-glutamate dehydrogenase, bacteria GJQ55_08685 IPR036291 NAD(P)-binding domain superfamily GJQ55_08685 IPR028971 NAD-glutamate dehydrogenase GJQ55_08690 IPR041628 ChlI/MoxR, AAA lid domain GJQ55_08690 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_08690 IPR011703 ATPase, AAA-3 GJQ55_08695 IPR002881 Domain of unknown function DUF58 GJQ55_08695 IPR036465 von Willebrand factor A-like domain superfamily GJQ55_08705 IPR024163 Aerotolerance regulator, N-terminal GJQ55_08705 IPR022933 Uncharacterised protein family UPF0353 GJQ55_08705 IPR002035 von Willebrand factor, type A GJQ55_08705 IPR036465 von Willebrand factor A-like domain superfamily GJQ55_08710 IPR022933 Uncharacterised protein family UPF0353 GJQ55_08710 IPR002035 von Willebrand factor, type A GJQ55_08710 IPR036465 von Willebrand factor A-like domain superfamily GJQ55_08720 IPR009056 Cytochrome c-like domain GJQ55_08720 IPR004852 Di-haem cytochrome c peroxidase GJQ55_08720 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase GJQ55_08720 IPR036909 Cytochrome c-like domain superfamily GJQ55_08725 IPR012340 Nucleic acid-binding, OB-fold GJQ55_08725 IPR004150 NAD-dependent DNA ligase, OB-fold GJQ55_08725 IPR013839 NAD-dependent DNA ligase, adenylation GJQ55_08725 IPR010994 RuvA domain 2-like GJQ55_08725 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GJQ55_08725 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GJQ55_08725 IPR001679 NAD-dependent DNA ligase GJQ55_08725 IPR001357 BRCT domain GJQ55_08725 IPR033136 NAD-dependent DNA ligase, conserved site GJQ55_08725 IPR018239 NAD-dependent DNA ligase, active site GJQ55_08725 IPR041663 DisA/LigA, helix-hairpin-helix motif GJQ55_08725 IPR036420 BRCT domain superfamily GJQ55_08725 IPR013840 NAD-dependent DNA ligase, N-terminal GJQ55_08730 IPR007449 ZipA, C-terminal FtsZ-binding domain GJQ55_08730 IPR011919 Cell division protein ZipA GJQ55_08730 IPR007449 ZipA, C-terminal FtsZ-binding domain GJQ55_08730 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GJQ55_08730 IPR011919 Cell division protein ZipA GJQ55_08730 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GJQ55_08735 IPR024704 Structural maintenance of chromosomes protein GJQ55_08735 IPR010935 SMCs flexible hinge GJQ55_08735 IPR036277 SMCs flexible hinge superfamily GJQ55_08735 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GJQ55_08735 IPR003395 RecF/RecN/SMC, N-terminal GJQ55_08735 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_08745 IPR005804 Fatty acid desaturase domain GJQ55_08745 IPR033885 Alkane/xylene monooxygenase GJQ55_08750 IPR005115 Uncharacterised domain UPF0126 GJQ55_08755 IPR000014 PAS domain GJQ55_08755 IPR013655 PAS fold-3 GJQ55_08755 IPR035965 PAS domain superfamily GJQ55_08755 IPR003660 HAMP domain GJQ55_08755 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GJQ55_08755 IPR001610 PAC motif GJQ55_08755 IPR004090 Chemotaxis methyl-accepting receptor GJQ55_08760 IPR000801 Putative esterase GJQ55_08760 IPR014186 S-formylglutathione hydrolase GJQ55_08760 IPR029058 Alpha/Beta hydrolase fold GJQ55_08765 IPR020843 Polyketide synthase, enoylreductase domain GJQ55_08765 IPR014183 Alcohol dehydrogenase class III GJQ55_08765 IPR013149 Alcohol dehydrogenase, C-terminal GJQ55_08765 IPR013154 Alcohol dehydrogenase, N-terminal GJQ55_08765 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GJQ55_08765 IPR036291 NAD(P)-binding domain superfamily GJQ55_08765 IPR011032 GroES-like superfamily GJQ55_08770 IPR020616 Thiolase, N-terminal GJQ55_08770 IPR020613 Thiolase, conserved site GJQ55_08770 IPR020617 Thiolase, C-terminal GJQ55_08770 IPR020610 Thiolase, active site GJQ55_08770 IPR020615 Thiolase, acyl-enzyme intermediate active site GJQ55_08770 IPR016039 Thiolase-like GJQ55_08770 IPR002155 Thiolase GJQ55_08770 IPR012805 Acetyl-CoA C-acyltransferase FadA GJQ55_08775 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GJQ55_08775 IPR036291 NAD(P)-binding domain superfamily GJQ55_08775 IPR012799 Fatty oxidation complex, alpha subunit FadB GJQ55_08775 IPR001753 Enoyl-CoA hydratase/isomerase GJQ55_08775 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GJQ55_08775 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GJQ55_08775 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GJQ55_08775 IPR029045 ClpP/crotonase-like domain superfamily GJQ55_08790 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GJQ55_08790 IPR017871 ABC transporter, conserved site GJQ55_08790 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_08790 IPR032781 ABC-transporter extension domain GJQ55_08790 IPR032524 ABC transporter Uup, C-terminal GJQ55_08790 IPR003593 AAA+ ATPase domain GJQ55_08790 IPR003439 ABC transporter-like GJQ55_08795 IPR005695 Cobalt/zinc/cadmium resistance protein CzcB GJQ55_08795 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain GJQ55_08795 IPR006143 RND efflux pump, membrane fusion protein GJQ55_08800 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GJQ55_08800 IPR001036 Acriflavin resistance protein GJQ55_08835 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal GJQ55_08835 IPR009057 Homeobox-like domain superfamily GJQ55_08835 IPR018060 DNA binding HTH domain, AraC-type GJQ55_08835 IPR020449 Transcription regulator HTH, AraC- type GJQ55_08855 IPR010752 Protein of unknown function DUF1329 GJQ55_08860 IPR037144 Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily GJQ55_08860 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold GJQ55_08860 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal GJQ55_08860 IPR012779 Peptidase M1, alanyl aminopeptidase GJQ55_08860 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GJQ55_08860 IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily GJQ55_08860 IPR042097 Aminopeptidase N-like , N-terminal GJQ55_08860 IPR027268 Peptidase M4/M1, CTD superfamily GJQ55_08860 IPR014782 Peptidase M1, membrane alanine aminopeptidase GJQ55_08875 IPR038236 GlpG peptidase, N-terminal domain superfamily GJQ55_08875 IPR022732 Peptidase S54, GlpG peptidase, N-terminal GJQ55_08875 IPR022764 Peptidase S54, rhomboid domain GJQ55_08875 IPR035952 Rhomboid-like superfamily GJQ55_08875 IPR023662 Rhomboid protease GlpG GJQ55_08880 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase GJQ55_08880 IPR041780 PrpE-like, metallophosphatase domain GJQ55_08880 IPR029052 Metallo-dependent phosphatase-like GJQ55_08880 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GJQ55_08880 IPR023937 Bis(5'-nucleosyl)-tetraphosphatase PrpE GJQ55_08885 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GJQ55_08885 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GJQ55_08885 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily GJQ55_08885 IPR002504 NAD kinase GJQ55_08900 IPR003601 DNA topoisomerase, type IA, domain 2 GJQ55_08900 IPR000380 DNA topoisomerase, type IA GJQ55_08900 IPR034149 DNA topoisomerase 1, TOPRIM domain GJQ55_08900 IPR006171 TOPRIM domain GJQ55_08900 IPR028612 DNA topoisomerase I, type IA GJQ55_08900 IPR005733 DNA topoisomerase I, bacterial-type GJQ55_08900 IPR013498 DNA topoisomerase, type IA, zn finger GJQ55_08900 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GJQ55_08900 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GJQ55_08900 IPR013497 DNA topoisomerase, type IA, central GJQ55_08900 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 GJQ55_08900 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 GJQ55_08900 IPR023406 DNA topoisomerase, type IA, active site GJQ55_08900 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 GJQ55_08900 IPR023405 DNA topoisomerase, type IA, core domain GJQ55_08925 IPR018060 DNA binding HTH domain, AraC-type GJQ55_08925 IPR020449 Transcription regulator HTH, AraC- type GJQ55_08925 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal GJQ55_08925 IPR009057 Homeobox-like domain superfamily GJQ55_08940 IPR008917 Transcription factor, Skn-1-like, DNA-binding domain superfamily GJQ55_08940 IPR020449 Transcription regulator HTH, AraC- type GJQ55_08940 IPR014710 RmlC-like jelly roll fold GJQ55_08940 IPR018060 DNA binding HTH domain, AraC-type GJQ55_08940 IPR009057 Homeobox-like domain superfamily GJQ55_08940 IPR011051 RmlC-like cupin domain superfamily GJQ55_08940 IPR018062 HTH domain AraC-type, conserved site GJQ55_08945 IPR029058 Alpha/Beta hydrolase fold GJQ55_08945 IPR000073 Alpha/beta hydrolase fold-1 GJQ55_08945 IPR000952 AB hydrolase 4, conserved site GJQ55_08945 IPR012020 AB hydrolase 4 family GJQ55_08955 IPR036286 LexA/Signal peptidase-like superfamily GJQ55_08955 IPR000223 Peptidase S26A, signal peptidase I GJQ55_08955 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GJQ55_08955 IPR019756 Peptidase S26A, signal peptidase I, serine active site GJQ55_08955 IPR019533 Peptidase S26 GJQ55_08955 IPR019758 Peptidase S26A, signal peptidase I, conserved site GJQ55_08965 IPR003607 HD/PDEase domain GJQ55_08965 IPR006261 dNTP triphosphohydrolase GJQ55_08965 IPR023024 dNTP triphosphohydrolase, type 3 GJQ55_08965 IPR006674 HD domain GJQ55_08965 IPR027432 Deoxyguanosinetriphosphate triphosphohydrolase, C-terminal GJQ55_08965 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain superfamily GJQ55_08970 IPR002771 Multiple antibiotic resistance (MarC)-related GJQ55_08985 IPR038377 Sodium/glucose symporter superfamily GJQ55_08985 IPR001734 Sodium/solute symporter GJQ55_08985 IPR019899 Sodium/solute symporter, VC2705 subfamily GJQ55_09005 IPR038188 TorS, sensor domain superfamily GJQ55_09005 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GJQ55_09005 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GJQ55_09005 IPR037952 Sensor histidine kinase TorS, sensor domain GJQ55_09005 IPR036641 HPT domain superfamily GJQ55_09005 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GJQ55_09005 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GJQ55_09005 IPR005467 Histidine kinase domain GJQ55_09005 IPR001789 Signal transduction response regulator, receiver domain GJQ55_09005 IPR003594 Histidine kinase/HSP90-like ATPase GJQ55_09005 IPR003660 HAMP domain GJQ55_09005 IPR011006 CheY-like superfamily GJQ55_09005 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GJQ55_09010 IPR011006 CheY-like superfamily GJQ55_09010 IPR001789 Signal transduction response regulator, receiver domain GJQ55_09010 IPR000792 Transcription regulator LuxR, C-terminal GJQ55_09010 IPR016032 Signal transduction response regulator, C-terminal effector GJQ55_09015 IPR011904 Acetate-CoA ligase GJQ55_09015 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain GJQ55_09015 IPR025110 AMP-binding enzyme, C-terminal domain GJQ55_09015 IPR020845 AMP-binding, conserved site GJQ55_09015 IPR000873 AMP-dependent synthetase/ligase GJQ55_09015 IPR042099 AMP-dependent synthetase-like superfamily GJQ55_09035 IPR005616 CcmH/CycL/Ccl2/NrfF family GJQ55_09035 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily GJQ55_09040 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GJQ55_09040 IPR013740 Redoxin GJQ55_09040 IPR036249 Thioredoxin-like superfamily GJQ55_09040 IPR017937 Thioredoxin, conserved site GJQ55_09040 IPR013766 Thioredoxin domain GJQ55_09045 IPR002541 Cytochrome c assembly protein GJQ55_09045 IPR003567 Cytochrome c-type biogenesis protein GJQ55_09045 IPR003568 Cytochrome c-type biogenesis protein CcmF GJQ55_09045 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal GJQ55_09050 IPR036127 CcmE-like superfamily GJQ55_09050 IPR004329 CcmE/CycJ protein GJQ55_09055 IPR007078 Haem exporter protein D (CcmD) GJQ55_09060 IPR003557 Cytochrome c-type biogenesis protein CcmC GJQ55_09060 IPR002541 Cytochrome c assembly protein GJQ55_09065 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria GJQ55_09065 IPR003544 Cytochrome c-type biogenesis protein CcmB GJQ55_09070 IPR003593 AAA+ ATPase domain GJQ55_09070 IPR003439 ABC transporter-like GJQ55_09070 IPR005895 ABC transporter, haem export, CcmA GJQ55_09070 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_09080 IPR006135 Type III secretion system substrate exporter GJQ55_09080 IPR006136 Flagellar biosynthetic protein FlhB GJQ55_09080 IPR029025 Type III secretion system substrate exporter, C-terminal GJQ55_09090 IPR003416 MgtC/SapB/SrpB/YhiD family GJQ55_09095 IPR011059 Metal-dependent hydrolase, composite domain superfamily GJQ55_09095 IPR023512 Deaminase MtaD/DadD GJQ55_09095 IPR032466 Metal-dependent hydrolase GJQ55_09095 IPR006680 Amidohydrolase-related GJQ55_09100 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase GJQ55_09100 IPR010233 Ubiquinone biosynthesis O-methyltransferase GJQ55_09105 IPR023214 HAD superfamily GJQ55_09105 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic GJQ55_09105 IPR023198 Phosphoglycolate phosphatase-like, domain 2 GJQ55_09105 IPR041492 Haloacid dehalogenase-like hydrolase GJQ55_09105 IPR006439 HAD hydrolase, subfamily IA GJQ55_09105 IPR036412 HAD-like superfamily GJQ55_09110 IPR036291 NAD(P)-binding domain superfamily GJQ55_09110 IPR020904 Short-chain dehydrogenase/reductase, conserved site GJQ55_09110 IPR002347 Short-chain dehydrogenase/reductase SDR GJQ55_09115 IPR000160 GGDEF domain GJQ55_09115 IPR029787 Nucleotide cyclase GJQ55_09120 IPR020103 Pseudouridine synthase, catalytic domain superfamily GJQ55_09120 IPR006145 Pseudouridine synthase, RsuA/RluA GJQ55_09120 IPR036986 RNA-binding S4 domain superfamily GJQ55_09120 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain GJQ55_09120 IPR002942 RNA-binding S4 domain GJQ55_09120 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GJQ55_09120 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GJQ55_09125 IPR036388 Winged helix-like DNA-binding domain superfamily GJQ55_09125 IPR005234 Chromosome segregation/condensation protein ScpB GJQ55_09125 IPR036390 Winged helix DNA-binding domain superfamily GJQ55_09130 IPR003768 Segregation and condensation protein A GJQ55_09135 IPR024109 Tryptophan-tRNA ligase, bacterial-type GJQ55_09135 IPR002306 Tryptophan-tRNA ligase GJQ55_09135 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold GJQ55_09135 IPR036913 YegP-like superfamily GJQ55_09135 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GJQ55_09135 IPR002305 Aminoacyl-tRNA synthetase, class Ic GJQ55_09140 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily GJQ55_09140 IPR006070 YrdC-like domain GJQ55_09145 IPR016195 Polymerase/histidinol phosphatase-like GJQ55_09145 IPR003141 Polymerase/histidinol phosphatase, N-terminal GJQ55_09145 IPR004013 PHP domain GJQ55_09150 IPR011008 Dimeric alpha-beta barrel GJQ55_09150 IPR005545 YCII-related GJQ55_09160 IPR029000 Cyclophilin-like domain superfamily GJQ55_09160 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GJQ55_09160 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GJQ55_09170 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC GJQ55_09170 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal GJQ55_09170 IPR008471 MnmC-like methyltransferase GJQ55_09170 IPR006076 FAD dependent oxidoreductase GJQ55_09170 IPR036188 FAD/NAD(P)-binding domain superfamily GJQ55_09170 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase GJQ55_09180 IPR036685 YehU-like superfamily GJQ55_09180 IPR010648 Uncharacterised protein family UPF0270 GJQ55_09190 IPR005804 Fatty acid desaturase domain GJQ55_09195 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GJQ55_09195 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GJQ55_09195 IPR012675 Beta-grasp domain superfamily GJQ55_09195 IPR017927 FAD-binding domain, ferredoxin reductase-type GJQ55_09195 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GJQ55_09195 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain GJQ55_09195 IPR001433 Oxidoreductase FAD/NAD(P)-binding GJQ55_09195 IPR017938 Riboflavin synthase-like beta-barrel GJQ55_09195 IPR036010 2Fe-2S ferredoxin-like superfamily GJQ55_09195 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain GJQ55_09200 IPR040442 Pyruvate kinase-like domain superfamily GJQ55_09200 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GJQ55_09200 IPR006254 Isocitrate lyase GJQ55_09200 IPR039556 ICL/PEPM domain GJQ55_09205 IPR004792 3-Dehydro-bile acid delta(4,6)-reductase-like GJQ55_09205 IPR036188 FAD/NAD(P)-binding domain superfamily GJQ55_09205 IPR023166 HI0933-like insert domain superfamily GJQ55_09215 IPR036397 Ribonuclease H superfamily GJQ55_09215 IPR012337 Ribonuclease H-like superfamily GJQ55_09215 IPR024567 Ribonuclease HII/HIII domain GJQ55_09215 IPR001352 Ribonuclease HII/HIII GJQ55_09215 IPR022898 Ribonuclease HII GJQ55_09220 IPR003835 Glycosyl transferase, family 19 GJQ55_09225 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal GJQ55_09225 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily GJQ55_09225 IPR001451 Hexapeptide repeat GJQ55_09225 IPR011004 Trimeric LpxA-like superfamily GJQ55_09225 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GJQ55_09230 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ GJQ55_09230 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GJQ55_09230 IPR029069 HotDog domain superfamily GJQ55_09235 IPR011004 Trimeric LpxA-like superfamily GJQ55_09235 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GJQ55_09235 IPR018357 Hexapeptide transferase, conserved site GJQ55_09235 IPR001451 Hexapeptide repeat GJQ55_09235 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GJQ55_09240 IPR024930 Skp domain superfamily GJQ55_09240 IPR005632 Chaperone protein Skp GJQ55_09245 IPR023707 Outer membrane protein assembly factor BamA GJQ55_09245 IPR039910 Surface antigen D15-like GJQ55_09245 IPR010827 POTRA domain, BamA/TamA-like GJQ55_09245 IPR000184 Bacterial surface antigen (D15) GJQ55_09245 IPR034746 POTRA domain GJQ55_09250 IPR001478 PDZ domain GJQ55_09250 IPR041489 PDZ domain 6 GJQ55_09250 IPR036034 PDZ superfamily GJQ55_09250 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GJQ55_09250 IPR008915 Peptidase M50 GJQ55_09255 IPR036291 NAD(P)-binding domain superfamily GJQ55_09255 IPR026877 DXP reductoisomerase C-terminal domain GJQ55_09255 IPR036169 DXP reductoisomerase, C-terminal domain superfamily GJQ55_09255 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GJQ55_09255 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GJQ55_09255 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GJQ55_09260 IPR000374 Phosphatidate cytidylyltransferase GJQ55_09265 IPR036424 Decaprenyl diphosphate synthase-like superfamily GJQ55_09265 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GJQ55_09265 IPR001441 Decaprenyl diphosphate synthase-like GJQ55_09270 IPR036191 RRF superfamily GJQ55_09270 IPR023584 Ribosome recycling factor domain GJQ55_09270 IPR002661 Ribosome recycling factor GJQ55_09275 IPR036393 Acetylglutamate kinase-like superfamily GJQ55_09275 IPR011817 Uridylate kinase GJQ55_09275 IPR015963 Uridylate kinase, bacteria GJQ55_09275 IPR001048 Aspartate/glutamate/uridylate kinase GJQ55_09280 IPR018101 Translation elongation factor Ts, conserved site GJQ55_09280 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GJQ55_09280 IPR009060 UBA-like superfamily GJQ55_09280 IPR036402 Elongation factor Ts, dimerisation domain superfamily GJQ55_09280 IPR001816 Translation elongation factor EFTs/EF1B GJQ55_09285 IPR001865 Ribosomal protein S2 GJQ55_09285 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GJQ55_09285 IPR018130 Ribosomal protein S2, conserved site GJQ55_09285 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily GJQ55_09290 IPR001714 Peptidase M24, methionine aminopeptidase GJQ55_09290 IPR000994 Peptidase M24 GJQ55_09290 IPR036005 Creatinase/aminopeptidase-like GJQ55_09290 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GJQ55_09295 IPR002912 ACT domain GJQ55_09295 IPR003607 HD/PDEase domain GJQ55_09295 IPR006674 HD domain GJQ55_09295 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GJQ55_09295 IPR002934 Polymerase, nucleotidyl transferase domain GJQ55_09295 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GJQ55_09300 IPR011051 RmlC-like cupin domain superfamily GJQ55_09300 IPR014710 RmlC-like jelly roll fold GJQ55_09300 IPR003829 Pirin, N-terminal domain GJQ55_09300 IPR008778 Pirin, C-terminal domain GJQ55_09300 IPR012093 Pirin GJQ55_09305 IPR011545 DEAD/DEAH box helicase domain GJQ55_09305 IPR028621 ATP-dependent RNA helicase SrmB GJQ55_09305 IPR014001 Helicase superfamily 1/2, ATP-binding domain GJQ55_09305 IPR001650 Helicase, C-terminal GJQ55_09305 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_09305 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site GJQ55_09305 IPR014014 RNA helicase, DEAD-box type, Q motif GJQ55_09325 IPR018317 Queuosine biosynthesis protein QueC GJQ55_09325 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold GJQ55_09330 IPR024924 7-carboxy-7-deazaguanine synthase-like GJQ55_09330 IPR013785 Aldolase-type TIM barrel GJQ55_09330 IPR030977 7-carboxy-7-deazaguanine synthase, Cx14CxxC-type GJQ55_09330 IPR007197 Radical SAM GJQ55_09335 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GJQ55_09335 IPR036736 ACP-like superfamily GJQ55_09335 IPR014043 Acyl transferase GJQ55_09335 IPR013154 Alcohol dehydrogenase, N-terminal GJQ55_09335 IPR011032 GroES-like superfamily GJQ55_09335 IPR018201 Beta-ketoacyl synthase, active site GJQ55_09335 IPR016039 Thiolase-like GJQ55_09335 IPR006162 Phosphopantetheine attachment site GJQ55_09335 IPR009081 Phosphopantetheine binding ACP domain GJQ55_09335 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GJQ55_09335 IPR013968 Polyketide synthase, ketoreductase domain GJQ55_09335 IPR042104 Polyketide synthase, dehydratase domain superfamily GJQ55_09335 IPR020843 Polyketide synthase, enoylreductase domain GJQ55_09335 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain GJQ55_09335 IPR032821 Ketoacyl-synthetase, C-terminal extension GJQ55_09335 IPR036291 NAD(P)-binding domain superfamily GJQ55_09335 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GJQ55_09335 IPR014030 Beta-ketoacyl synthase, N-terminal GJQ55_09335 IPR014031 Beta-ketoacyl synthase, C-terminal GJQ55_09335 IPR020807 Polyketide synthase, dehydratase domain GJQ55_09340 IPR036388 Winged helix-like DNA-binding domain superfamily GJQ55_09340 IPR005119 LysR, substrate-binding GJQ55_09340 IPR020890 Transcription regulator HTH, HdfR GJQ55_09340 IPR000847 Transcription regulator HTH, LysR GJQ55_09340 IPR036390 Winged helix DNA-binding domain superfamily GJQ55_09345 IPR007335 Protein of unknown function DUF413 GJQ55_09350 IPR011761 ATP-grasp fold GJQ55_09350 IPR013651 ATP-grasp fold, RimK-type GJQ55_09350 IPR013815 ATP-grasp fold, subdomain 1 GJQ55_09350 IPR021109 Aspartic peptidase domain superfamily GJQ55_09350 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK GJQ55_09350 IPR041107 RimK, PreATP-grasp domain GJQ55_09350 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX GJQ55_09355 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GJQ55_09355 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GJQ55_09355 IPR015424 Pyridoxal phosphate-dependent transferase GJQ55_09355 IPR005814 Aminotransferase class-III GJQ55_09355 IPR004636 Acetylornithine/Succinylornithine transaminase family GJQ55_09360 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GJQ55_09360 IPR006130 Aspartate/ornithine carbamoyltransferase GJQ55_09360 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GJQ55_09360 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GJQ55_09360 IPR002292 Ornithine/putrescine carbamoyltransferase GJQ55_09360 IPR024904 Ornithine carbamoyltransferase GJQ55_09365 IPR029787 Nucleotide cyclase GJQ55_09365 IPR000160 GGDEF domain GJQ55_09370 IPR018485 Carbohydrate kinase, FGGY, C-terminal GJQ55_09370 IPR018483 Carbohydrate kinase, FGGY, conserved site GJQ55_09370 IPR018484 Carbohydrate kinase, FGGY, N-terminal GJQ55_09370 IPR005999 Glycerol kinase GJQ55_09370 IPR000577 Carbohydrate kinase, FGGY GJQ55_09375 IPR000847 Transcription regulator HTH, LysR GJQ55_09375 IPR036388 Winged helix-like DNA-binding domain superfamily GJQ55_09375 IPR036390 Winged helix DNA-binding domain superfamily GJQ55_09375 IPR005119 LysR, substrate-binding GJQ55_09375 IPR037406 HTH-type transcriptional regulator MetR, PBP2 domain GJQ55_09380 IPR003660 HAMP domain GJQ55_09380 IPR003594 Histidine kinase/HSP90-like ATPase GJQ55_09380 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GJQ55_09380 IPR005467 Histidine kinase domain GJQ55_09380 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GJQ55_09380 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GJQ55_09380 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GJQ55_09385 IPR039420 Transcriptional regulatory protein WalR-like GJQ55_09385 IPR011006 CheY-like superfamily GJQ55_09385 IPR001867 OmpR/PhoB-type DNA-binding domain GJQ55_09385 IPR016032 Signal transduction response regulator, C-terminal effector GJQ55_09385 IPR001789 Signal transduction response regulator, receiver domain GJQ55_09385 IPR036388 Winged helix-like DNA-binding domain superfamily GJQ55_09390 IPR039718 Ribonucleoside-diphosphate reductase large subunit GJQ55_09390 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal GJQ55_09390 IPR013509 Ribonucleotide reductase large subunit, N-terminal GJQ55_09390 IPR005144 ATP-cone domain GJQ55_09390 IPR013346 Ribonucleotide reductase, class I , alpha subunit GJQ55_09390 IPR000788 Ribonucleotide reductase large subunit, C-terminal GJQ55_09395 IPR000358 Ribonucleotide reductase small subunit family GJQ55_09395 IPR009078 Ferritin-like superfamily GJQ55_09395 IPR012348 Ribonucleotide reductase-like GJQ55_09395 IPR033909 Ribonucleotide reductase small subunit GJQ55_09395 IPR030475 Ribonucleotide reductase small subunit, acitve site GJQ55_09400 IPR012675 Beta-grasp domain superfamily GJQ55_09400 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GJQ55_09400 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GJQ55_09400 IPR036010 2Fe-2S ferredoxin-like superfamily GJQ55_09410 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GJQ55_09410 IPR036249 Thioredoxin-like superfamily GJQ55_09410 IPR024706 Peroxiredoxin, AhpC-type GJQ55_09410 IPR013766 Thioredoxin domain GJQ55_09420 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal GJQ55_09420 IPR009057 Homeobox-like domain superfamily GJQ55_09420 IPR018060 DNA binding HTH domain, AraC-type GJQ55_09420 IPR020449 Transcription regulator HTH, AraC- type GJQ55_09440 IPR039315 Chemotaxis protein CheW GJQ55_09440 IPR036061 CheW-like domain superfamily GJQ55_09440 IPR002545 CheW-like domain GJQ55_09450 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_09450 IPR025669 AAA domain GJQ55_09455 IPR025713 Motility protein B, N-terminal domain GJQ55_09455 IPR036737 OmpA-like domain superfamily GJQ55_09455 IPR006665 OmpA-like domain GJQ55_09460 IPR000540 Flagellar motor protein MotA, conserved site GJQ55_09460 IPR002898 MotA/TolQ/ExbB proton channel GJQ55_09465 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GJQ55_09465 IPR011006 CheY-like superfamily GJQ55_09465 IPR035909 Methylesterase CheB, C-terminal GJQ55_09465 IPR001789 Signal transduction response regulator, receiver domain GJQ55_09465 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type GJQ55_09470 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GJQ55_09470 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GJQ55_09470 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GJQ55_09470 IPR004105 Histidine kinase CheA-like, homodimeric domain GJQ55_09470 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GJQ55_09470 IPR001789 Signal transduction response regulator, receiver domain GJQ55_09470 IPR036061 CheW-like domain superfamily GJQ55_09470 IPR002545 CheW-like domain GJQ55_09470 IPR011006 CheY-like superfamily GJQ55_09470 IPR003594 Histidine kinase/HSP90-like ATPase GJQ55_09470 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GJQ55_09470 IPR005467 Histidine kinase domain GJQ55_09470 IPR036641 HPT domain superfamily GJQ55_09475 IPR007439 Chemotaxis phosphatase, CheZ GJQ55_09480 IPR011006 CheY-like superfamily GJQ55_09480 IPR001789 Signal transduction response regulator, receiver domain GJQ55_09485 IPR000943 RNA polymerase sigma-70 GJQ55_09485 IPR007624 RNA polymerase sigma-70 region 3 GJQ55_09485 IPR007627 RNA polymerase sigma-70 region 2 GJQ55_09485 IPR007630 RNA polymerase sigma-70 region 4 GJQ55_09485 IPR012845 RNA polymerase sigma factor, FliA/WhiG GJQ55_09485 IPR013325 RNA polymerase sigma factor, region 2 GJQ55_09485 IPR014284 RNA polymerase sigma-70 like domain GJQ55_09485 IPR028617 RNA polymerase sigma factor FliA GJQ55_09485 IPR013324 RNA polymerase sigma factor, region 3/4-like GJQ55_09490 IPR025501 ATP binding protein MinD GJQ55_09490 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_09490 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 GJQ55_09495 IPR003593 AAA+ ATPase domain GJQ55_09495 IPR020006 Flagellar biosynthesis protein FlhF GJQ55_09495 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_09495 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GJQ55_09500 IPR001712 Type III secretion system FHIPEP GJQ55_09500 IPR006301 Flagellar biosynthesis protein FlhA GJQ55_09500 IPR025505 FHIPEP conserved site GJQ55_09500 IPR042194 FHIPEP, domain 1 GJQ55_09500 IPR042193 FHIPEP, domain 3 GJQ55_09500 IPR042196 FHIPEP, domain 4 GJQ55_09505 IPR006136 Flagellar biosynthetic protein FlhB GJQ55_09505 IPR006135 Type III secretion system substrate exporter GJQ55_09505 IPR029025 Type III secretion system substrate exporter, C-terminal GJQ55_09510 IPR006303 Flagellar biosynthesis protein FliR GJQ55_09510 IPR002010 Type III secretion system inner membrane R protein GJQ55_09515 IPR002191 Bacterial export protein family 3 GJQ55_09515 IPR006305 Flagellar biosynthesis protein FliQ GJQ55_09520 IPR005838 Type III secretion system inner membrane P protein GJQ55_09520 IPR005837 Flagellar transport protein FliP GJQ55_09530 IPR012826 Flagellar motor switch FliN GJQ55_09530 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GJQ55_09530 IPR001543 Surface presentation of antigen (SpoA) GJQ55_09530 IPR036429 SpoA-like superfamily GJQ55_09535 IPR028976 CheC-like superfamily GJQ55_09535 IPR001689 Flagellar motor switch protein FliM GJQ55_09535 IPR001543 Surface presentation of antigen (SpoA) GJQ55_09535 IPR036429 SpoA-like superfamily GJQ55_09560 IPR040627 T3SS EscN ATPase, C-terminal GJQ55_09560 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_09560 IPR020005 Flagellar export ATPase FliI, clade 1 GJQ55_09560 IPR005714 ATPase, type III secretion system, FliI/YscN GJQ55_09560 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GJQ55_09560 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GJQ55_09560 IPR003593 AAA+ ATPase domain GJQ55_09560 IPR032463 ATPase, type III secretion system, FliI GJQ55_09570 IPR000090 Flagellar motor switch protein FliG GJQ55_09570 IPR023087 Flagellar motor switch protein FliG, C-terminal GJQ55_09570 IPR011002 Flagellar motor switch protein FliG, alpha-helical GJQ55_09570 IPR032779 Flagellar motor switch protein FliG, middle domain GJQ55_09570 IPR028263 Flagellar motor switch protein FliG, N-terminal domain GJQ55_09575 IPR013556 Flagellar M-ring C-terminal GJQ55_09575 IPR006182 Secretory protein YscJ/FliF GJQ55_09575 IPR000067 Flagellar M-ring protein FliF GJQ55_09580 IPR001624 Flagellar hook-basal body complex protein FliE GJQ55_09585 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_09585 IPR002197 DNA binding HTH domain, Fis-type GJQ55_09585 IPR009057 Homeobox-like domain superfamily GJQ55_09585 IPR011006 CheY-like superfamily GJQ55_09585 IPR003593 AAA+ ATPase domain GJQ55_09585 IPR029995 Transcriptional activator SfnR/FlbD GJQ55_09585 IPR025944 Sigma-54 interaction domain, conserved site GJQ55_09585 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 GJQ55_09585 IPR001789 Signal transduction response regulator, receiver domain GJQ55_09585 IPR002078 RNA polymerase sigma factor 54 interaction domain GJQ55_09585 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 GJQ55_09590 IPR003594 Histidine kinase/HSP90-like ATPase GJQ55_09590 IPR000014 PAS domain GJQ55_09590 IPR035965 PAS domain superfamily GJQ55_09590 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GJQ55_09590 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GJQ55_09590 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GJQ55_09590 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GJQ55_09590 IPR005467 Histidine kinase domain GJQ55_09595 IPR003593 AAA+ ATPase domain GJQ55_09595 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 GJQ55_09595 IPR002078 RNA polymerase sigma factor 54 interaction domain GJQ55_09595 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_09595 IPR002197 DNA binding HTH domain, Fis-type GJQ55_09595 IPR009057 Homeobox-like domain superfamily GJQ55_09595 IPR010518 Flagellar regulatory FleQ GJQ55_09595 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 GJQ55_09595 IPR011006 CheY-like superfamily GJQ55_09595 IPR025944 Sigma-54 interaction domain, conserved site GJQ55_09600 IPR003713 Flagellar protein FliS GJQ55_09600 IPR036584 Flagellar protein FliS superfamily GJQ55_09610 IPR005122 Uracil-DNA glycosylase-like GJQ55_09610 IPR018085 Uracil-DNA glycosylase, active site GJQ55_09610 IPR002043 Uracil-DNA glycosylase family 1 GJQ55_09610 IPR036895 Uracil-DNA glycosylase-like domain superfamily GJQ55_09615 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GJQ55_09615 IPR012340 Nucleic acid-binding, OB-fold GJQ55_09615 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GJQ55_09615 IPR002313 Lysine-tRNA ligase, class II GJQ55_09615 IPR006195 Aminoacyl-tRNA synthetase, class II GJQ55_09615 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GJQ55_09635 IPR010810 Flagellin hook, IN motif GJQ55_09635 IPR040026 Flagellar hook-associated protein 2 GJQ55_09635 IPR003481 Flagellar hook-associated protein 2, N-terminal GJQ55_09635 IPR010809 Flagellar hook-associated protein 2, C-terminal GJQ55_09640 IPR035924 FlaG-like superfamily GJQ55_09640 IPR005186 FlaG protein GJQ55_09645 IPR001492 Flagellin GJQ55_09645 IPR001492 Flagellin GJQ55_09645 IPR001029 Flagellin, D0/D1 domain GJQ55_09645 IPR001029 Flagellin, D0/D1 domain GJQ55_09660 IPR001029 Flagellin, D0/D1 domain GJQ55_09660 IPR013384 Flagellar hook-associated protein 3 GJQ55_09670 IPR019301 Flagellar protein FlgJ, N-terminal GJQ55_09670 IPR013377 Peptidoglycan hydrolase FlgJ GJQ55_09670 IPR023346 Lysozyme-like domain superfamily GJQ55_09670 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GJQ55_09680 IPR001782 Flagellar P-ring protein GJQ55_09685 IPR000527 Flagellar L-ring protein GJQ55_09690 IPR001444 Flagellar basal body rod protein, N-terminal GJQ55_09690 IPR019776 Flagellar basal body rod protein, conserved site GJQ55_09690 IPR020013 Flagellar hook-basal body protein, FlgE/F/G GJQ55_09690 IPR010930 Flagellar basal-body/hook protein, C-terminal domain GJQ55_09690 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like GJQ55_09690 IPR012834 Flagellar basal-body rod FlgG GJQ55_09695 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like GJQ55_09695 IPR010930 Flagellar basal-body/hook protein, C-terminal domain GJQ55_09695 IPR019776 Flagellar basal body rod protein, conserved site GJQ55_09695 IPR020013 Flagellar hook-basal body protein, FlgE/F/G GJQ55_09695 IPR001444 Flagellar basal body rod protein, N-terminal GJQ55_09700 IPR011491 Flagellar hook protein FlgE GJQ55_09700 IPR037058 Flagellar hook protein FlgE superfamily GJQ55_09700 IPR001444 Flagellar basal body rod protein, N-terminal GJQ55_09700 IPR019776 Flagellar basal body rod protein, conserved site GJQ55_09700 IPR020013 Flagellar hook-basal body protein, FlgE/F/G GJQ55_09700 IPR010930 Flagellar basal-body/hook protein, C-terminal domain GJQ55_09700 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like GJQ55_09705 IPR025963 FlgD Tudor-like domain GJQ55_09705 IPR005648 Flagellar hook capping protein GJQ55_09705 IPR025965 FlgD Ig-like domain GJQ55_09710 IPR001444 Flagellar basal body rod protein, N-terminal GJQ55_09710 IPR019776 Flagellar basal body rod protein, conserved site GJQ55_09710 IPR010930 Flagellar basal-body/hook protein, C-terminal domain GJQ55_09710 IPR006299 Flagellar basal-body rod protein FlgC GJQ55_09715 IPR001444 Flagellar basal body rod protein, N-terminal GJQ55_09715 IPR019776 Flagellar basal body rod protein, conserved site GJQ55_09715 IPR006300 Flagellar basal-body rod protein FlgB GJQ55_09720 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase GJQ55_09720 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily GJQ55_09720 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal GJQ55_09720 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal GJQ55_09720 IPR026024 Chemotaxis protein methyltransferase CheR GJQ55_09720 IPR000780 MCP methyltransferase, CheR-type GJQ55_09725 IPR002545 CheW-like domain GJQ55_09725 IPR036061 CheW-like domain superfamily GJQ55_09725 IPR024181 Chemotaxis response regulator CheV GJQ55_09725 IPR001789 Signal transduction response regulator, receiver domain GJQ55_09725 IPR011006 CheY-like superfamily GJQ55_09745 IPR023787 Type III secretion system flagellar brake protein YcgR GJQ55_09745 IPR012349 FMN-binding split barrel GJQ55_09745 IPR009875 PilZ domain GJQ55_09745 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal GJQ55_09770 IPR035439 UPF0145 domain superfamily GJQ55_09770 IPR002765 Uncharacterised protein family UPF0145 GJQ55_09775 IPR002765 Uncharacterised protein family UPF0145 GJQ55_09775 IPR035439 UPF0145 domain superfamily GJQ55_09780 IPR011990 Tetratricopeptide-like helical domain superfamily GJQ55_09780 IPR013026 Tetratricopeptide repeat-containing domain GJQ55_09780 IPR030873 Beta-barrel assembly-enhancing protease GJQ55_09780 IPR001915 Peptidase M48 GJQ55_09780 IPR019734 Tetratricopeptide repeat GJQ55_09785 IPR036188 FAD/NAD(P)-binding domain superfamily GJQ55_09785 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GJQ55_09785 IPR005982 Thioredoxin reductase GJQ55_09785 IPR023753 FAD/NAD(P)-binding domain GJQ55_09800 IPR038404 TRAP transporter solute receptor DctP superfamily GJQ55_09810 IPR029060 PIN-like domain superfamily GJQ55_09810 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_09810 IPR003714 PhoH-like protein GJQ55_09810 IPR002716 PIN domain GJQ55_09820 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG GJQ55_09820 IPR031100 LOG family GJQ55_09825 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GJQ55_09825 IPR020103 Pseudouridine synthase, catalytic domain superfamily GJQ55_09825 IPR006145 Pseudouridine synthase, RsuA/RluA GJQ55_09830 IPR017937 Thioredoxin, conserved site GJQ55_09830 IPR012336 Thioredoxin-like fold GJQ55_09830 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GJQ55_09830 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal GJQ55_09830 IPR033954 Disulphide bond isomerase, DsbC/G GJQ55_09830 IPR036249 Thioredoxin-like superfamily GJQ55_09830 IPR013766 Thioredoxin domain GJQ55_09835 IPR038657 Ribosomal protein L19 superfamily GJQ55_09835 IPR001857 Ribosomal protein L19 GJQ55_09835 IPR008991 Translation protein SH3-like domain superfamily GJQ55_09835 IPR018257 Ribosomal protein L19, conserved site GJQ55_09840 IPR029028 Alpha/beta knot methyltransferases GJQ55_09840 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GJQ55_09840 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GJQ55_09840 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal GJQ55_09840 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain GJQ55_09845 IPR011961 16S rRNA processing protein RimM GJQ55_09845 IPR027275 PRC-barrel domain GJQ55_09845 IPR011033 PRC-barrel-like superfamily GJQ55_09845 IPR002676 RimM, N-terminal GJQ55_09845 IPR036976 RimM, N-terminal domain superfamily GJQ55_09845 IPR009000 Translation protein, beta-barrel domain superfamily GJQ55_09850 IPR023803 Ribosomal protein S16 domain superfamily GJQ55_09850 IPR000307 Ribosomal protein S16 GJQ55_09850 IPR020592 Ribosomal protein S16, conserved site GJQ55_09855 IPR003841 Sodium-dependent phosphate transport protein GJQ55_09855 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein GJQ55_09860 IPR001482 Type II/IV secretion system protein GJQ55_09860 IPR006321 Pilus retraction protein PilT GJQ55_09860 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_09870 IPR002934 Polymerase, nucleotidyl transferase domain GJQ55_09870 IPR025184 Domain of unknown function DUF4111 GJQ55_09870 IPR024172 Streptomycin 3''-adenylyltransferase GJQ55_09895 IPR017926 Glutamine amidotransferase GJQ55_09895 IPR010073 Phosphoribosylformylglycinamidine synthase PurL GJQ55_09895 IPR041609 Phosphoribosylformylglycinamidine synthase, linker domain GJQ55_09895 IPR010918 PurM-like, C-terminal domain GJQ55_09895 IPR036676 PurM-like, C-terminal domain superfamily GJQ55_09895 IPR036921 PurM-like, N-terminal domain superfamily GJQ55_09895 IPR029062 Class I glutamine amidotransferase-like GJQ55_09895 IPR040707 Phosphoribosylformylglycinamidine synthase, N-terminal GJQ55_09895 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily GJQ55_09900 IPR023346 Lysozyme-like domain superfamily GJQ55_09900 IPR023703 Membrane-bound lytic murein transglycosylase F GJQ55_09900 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF GJQ55_09900 IPR008258 Transglycosylase SLT domain 1 GJQ55_09905 IPR016192 APOBEC/CMP deaminase, zinc-binding GJQ55_09905 IPR002125 Cytidine and deoxycytidylate deaminase domain GJQ55_09905 IPR016193 Cytidine deaminase-like GJQ55_09905 IPR028883 tRNA-specific adenosine deaminase GJQ55_09915 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GJQ55_09915 IPR001950 SUI1 domain GJQ55_09915 IPR036877 SUI1 domain superfamily GJQ55_09920 IPR003594 Histidine kinase/HSP90-like ATPase GJQ55_09920 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GJQ55_09920 IPR005467 Histidine kinase domain GJQ55_09920 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GJQ55_09920 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GJQ55_09920 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF GJQ55_09920 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GJQ55_09925 IPR000485 AsnC-type HTH domain GJQ55_09925 IPR011008 Dimeric alpha-beta barrel GJQ55_09925 IPR019888 Transcription regulator AsnC-type GJQ55_09925 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain GJQ55_09925 IPR036390 Winged helix DNA-binding domain superfamily GJQ55_09925 IPR036388 Winged helix-like DNA-binding domain superfamily GJQ55_09925 IPR019885 Transcription regulator HTH, AsnC-type, conserved site GJQ55_09930 IPR000891 Pyruvate carboxyltransferase GJQ55_09930 IPR039371 LeuA, N-terminal catalytic TIM barrel domain GJQ55_09930 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily GJQ55_09930 IPR005668 2-isopropylmalate synthase GJQ55_09930 IPR013785 Aldolase-type TIM barrel GJQ55_09930 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GJQ55_09930 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GJQ55_09935 IPR000212 DNA helicase, UvrD/REP type GJQ55_09935 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_09935 IPR014016 UvrD-like helicase, ATP-binding domain GJQ55_09935 IPR034739 UvrD/AddA helicase, N-terminal GJQ55_09935 IPR005751 ATP-dependent DNA helicase PcrA GJQ55_09935 IPR014017 UvrD-like DNA helicase, C-terminal GJQ55_09935 IPR013986 DExx box DNA helicase domain superfamily GJQ55_09945 IPR010987 Glutathione S-transferase, C-terminal-like GJQ55_09945 IPR004045 Glutathione S-transferase, N-terminal GJQ55_09945 IPR036282 Glutathione S-transferase, C-terminal domain superfamily GJQ55_09945 IPR040079 Glutathione Transferase family GJQ55_09945 IPR036249 Thioredoxin-like superfamily GJQ55_09950 IPR014014 RNA helicase, DEAD-box type, Q motif GJQ55_09950 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site GJQ55_09950 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_09950 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily GJQ55_09950 IPR011545 DEAD/DEAH box helicase domain GJQ55_09950 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain GJQ55_09950 IPR034415 CsdA, RNA recognition motif GJQ55_09950 IPR021046 Cold-shock protein, DEAD box A, C-terminal GJQ55_09950 IPR028618 ATP-dependent RNA helicase DeaD GJQ55_09950 IPR014001 Helicase superfamily 1/2, ATP-binding domain GJQ55_09950 IPR001650 Helicase, C-terminal GJQ55_09955 IPR005467 Histidine kinase domain GJQ55_09955 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GJQ55_09955 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GJQ55_09955 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GJQ55_09955 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GJQ55_09955 IPR003594 Histidine kinase/HSP90-like ATPase GJQ55_09955 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF GJQ55_09960 IPR009664 Pyrimidine/purine nucleoside phosphorylase GJQ55_09960 IPR014710 RmlC-like jelly roll fold GJQ55_09960 IPR011051 RmlC-like cupin domain superfamily GJQ55_09970 IPR024530 Putative quorum-sensing-regulated virulence factor GJQ55_09975 IPR022310 NAD/GMP synthase GJQ55_09975 IPR025777 GMP synthetase ATP pyrophosphatase domain GJQ55_09975 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold GJQ55_09975 IPR004739 GMP synthase, glutamine amidotransferase GJQ55_09975 IPR022955 GMP synthase GJQ55_09975 IPR029062 Class I glutamine amidotransferase-like GJQ55_09975 IPR001674 GMP synthase, C-terminal GJQ55_09975 IPR017926 Glutamine amidotransferase GJQ55_09990 IPR029935 Uracil permease GJQ55_09990 IPR006042 Xanthine/uracil permease GJQ55_09990 IPR006043 Xanthine/uracil/vitamin C permease GJQ55_10000 IPR000836 Phosphoribosyltransferase domain GJQ55_10000 IPR029057 Phosphoribosyltransferase-like GJQ55_10000 IPR005765 Uracil phosphoribosyl transferase GJQ55_10000 IPR034332 Uracil phosphoribosyltransferase, bacterial-type GJQ55_10005 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GJQ55_10005 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site GJQ55_10010 IPR007536 Ribosomal RNA small subunit methyltransferase J GJQ55_10010 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase GJQ55_10015 IPR003824 Undecaprenyl-diphosphatase UppP GJQ55_10020 IPR000905 Gcp-like domain GJQ55_10020 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GJQ55_10030 IPR006259 Adenylate kinase subfamily GJQ55_10030 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_10030 IPR000850 Adenylate kinase/UMP-CMP kinase GJQ55_10030 IPR033690 Adenylate kinase, conserved site GJQ55_10030 IPR007862 Adenylate kinase, active site lid domain GJQ55_10035 IPR021135 Phosphoenolpyruvate carboxylase GJQ55_10035 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GJQ55_10035 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site GJQ55_10035 IPR033129 Phosphoenolpyruvate carboxylase, His active site GJQ55_10035 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GJQ55_10040 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core GJQ55_10040 IPR011551 NTP pyrophosphohydrolase MazG GJQ55_10045 IPR004095 TGS GJQ55_10045 IPR002912 ACT domain GJQ55_10045 IPR012675 Beta-grasp domain superfamily GJQ55_10045 IPR003607 HD/PDEase domain GJQ55_10045 IPR007685 RelA/SpoT GJQ55_10045 IPR004811 RelA/SpoT family GJQ55_10045 IPR012676 TGS-like GJQ55_10045 IPR033655 RelA, TGS domain GJQ55_10050 IPR010280 (Uracil-5)-methyltransferase family GJQ55_10050 IPR002792 TRAM domain GJQ55_10050 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase GJQ55_10050 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GJQ55_10050 IPR030391 RNA methyltransferase TrmA, conserved site GJQ55_10050 IPR030390 RNA methyltransferase TrmA, active site GJQ55_10050 IPR012340 Nucleic acid-binding, OB-fold GJQ55_10055 IPR005858 Cysteine synthase CysM GJQ55_10055 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GJQ55_10055 IPR001926 Pyridoxal-phosphate dependent enzyme GJQ55_10055 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme GJQ55_10055 IPR005856 Cysteine synthase GJQ55_10060 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GJQ55_10060 IPR001789 Signal transduction response regulator, receiver domain GJQ55_10060 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GJQ55_10060 IPR019247 Histidine kinase BarA, N-terminal GJQ55_10060 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GJQ55_10060 IPR011006 CheY-like superfamily GJQ55_10060 IPR003660 HAMP domain GJQ55_10060 IPR003594 Histidine kinase/HSP90-like ATPase GJQ55_10060 IPR036641 HPT domain superfamily GJQ55_10060 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GJQ55_10060 IPR005467 Histidine kinase domain GJQ55_10060 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GJQ55_10065 IPR008278 4'-phosphopantetheinyl transferase domain GJQ55_10065 IPR004568 Phosphopantetheine-protein transferase domain GJQ55_10065 IPR002582 Holo-[acyl carrier protein] synthase GJQ55_10065 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GJQ55_10070 IPR036130 Pyridoxine 5'-phosphate synthase GJQ55_10070 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GJQ55_10070 IPR013785 Aldolase-type TIM barrel GJQ55_10075 IPR003717 Recombination protein O, RecO GJQ55_10075 IPR037278 ARFGAP/RecO-like zinc finger GJQ55_10075 IPR012340 Nucleic acid-binding, OB-fold GJQ55_10075 IPR022572 DNA replication/recombination mediator RecO, N-terminal GJQ55_10080 IPR030388 Era-type guanine nucleotide-binding (G) domain GJQ55_10080 IPR005662 GTP-binding protein Era GJQ55_10080 IPR015946 K homology domain-like, alpha/beta GJQ55_10080 IPR004044 K Homology domain, type 2 GJQ55_10080 IPR009019 K homology domain superfamily, prokaryotic type GJQ55_10080 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_10080 IPR005225 Small GTP-binding protein domain GJQ55_10080 IPR006073 GTP binding domain GJQ55_10085 IPR000999 Ribonuclease III domain GJQ55_10085 IPR014720 Double-stranded RNA-binding domain GJQ55_10085 IPR011907 Ribonuclease III GJQ55_10085 IPR036389 Ribonuclease III, endonuclease domain superfamily GJQ55_10095 IPR000640 Elongation factor EFG, domain V-like GJQ55_10095 IPR004161 Translation elongation factor EFTu-like, domain 2 GJQ55_10095 IPR006297 Elongation factor 4 GJQ55_10095 IPR031157 Tr-type G domain, conserved site GJQ55_10095 IPR038363 LepA, C-terminal domain superfamily GJQ55_10095 IPR000795 Transcription factor, GTP-binding domain GJQ55_10095 IPR005225 Small GTP-binding protein domain GJQ55_10095 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_10095 IPR035647 EF-G domain III/V-like GJQ55_10095 IPR013842 GTP-binding protein LepA, C-terminal GJQ55_10095 IPR035654 Elongation factor 4, domain IV GJQ55_10100 IPR011782 Peptidase S1C, Do GJQ55_10100 IPR036034 PDZ superfamily GJQ55_10100 IPR001478 PDZ domain GJQ55_10100 IPR009003 Peptidase S1, PA clan GJQ55_10100 IPR001940 Peptidase S1C GJQ55_10110 IPR005588 MucB/RseB GJQ55_10110 IPR033434 MucB/RseB, N-terminal GJQ55_10110 IPR033436 MucB/RseB, C-terminal GJQ55_10110 IPR038484 MucB/RseB, C-terminal domain superfamily GJQ55_10115 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily GJQ55_10115 IPR005572 Anti sigma-E protein RseA, N-terminal GJQ55_10115 IPR005573 Anti sigma-E protein RseA, C-terminal GJQ55_10120 IPR036388 Winged helix-like DNA-binding domain superfamily GJQ55_10120 IPR014284 RNA polymerase sigma-70 like domain GJQ55_10120 IPR007627 RNA polymerase sigma-70 region 2 GJQ55_10120 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GJQ55_10120 IPR014286 RNA polymerase sigma-70 RpoE type GJQ55_10120 IPR013325 RNA polymerase sigma factor, region 2 GJQ55_10120 IPR013324 RNA polymerase sigma factor, region 3/4-like GJQ55_10120 IPR039425 RNA polymerase sigma-70 like GJQ55_10120 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GJQ55_10125 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain GJQ55_10125 IPR036188 FAD/NAD(P)-binding domain superfamily GJQ55_10125 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GJQ55_10125 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GJQ55_10125 IPR005288 L-aspartate oxidase GJQ55_10125 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily GJQ55_10135 IPR036714 Flavinator of succinate dehydrogenase superfamily GJQ55_10135 IPR005631 Flavinator of succinate dehydrogenase GJQ55_10140 IPR006222 Aminomethyltransferase, folate-binding domain GJQ55_10140 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal GJQ55_10140 IPR023758 tRNA-modifying protein YgfZ GJQ55_10140 IPR017703 YgfZ/GcvT conserved site GJQ55_10150 IPR029045 ClpP/crotonase-like domain superfamily GJQ55_10150 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GJQ55_10150 IPR001753 Enoyl-CoA hydratase/isomerase GJQ55_10150 IPR014748 Enoyl-CoA hydratase, C-terminal GJQ55_10160 IPR029058 Alpha/Beta hydrolase fold GJQ55_10160 IPR000073 Alpha/beta hydrolase fold-1 GJQ55_10160 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GJQ55_10170 IPR032781 ABC-transporter extension domain GJQ55_10170 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_10170 IPR003439 ABC transporter-like GJQ55_10170 IPR003593 AAA+ ATPase domain GJQ55_10175 IPR018490 Cyclic nucleotide-binding-like GJQ55_10175 IPR036390 Winged helix DNA-binding domain superfamily GJQ55_10175 IPR036388 Winged helix-like DNA-binding domain superfamily GJQ55_10175 IPR018335 Transcription regulator HTH, Crp-type, conserved site GJQ55_10175 IPR014710 RmlC-like jelly roll fold GJQ55_10175 IPR012318 Crp-type HTH domain GJQ55_10175 IPR000595 Cyclic nucleotide-binding domain GJQ55_10175 IPR018488 Cyclic nucleotide-binding, conserved site GJQ55_10180 IPR004680 Citrate transporter-like domain GJQ55_10180 IPR004672 Na+/H+ antiporter NhaD GJQ55_10190 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GJQ55_10190 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GJQ55_10190 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal GJQ55_10190 IPR012094 tRNA(Ile)-lysidine synthase GJQ55_10190 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold GJQ55_10190 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GJQ55_10195 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain GJQ55_10195 IPR041931 Bacterial DNA polymerase III alpha subunit, thumb domain GJQ55_10195 IPR040982 DNA polymerase III alpha subunit finger domain GJQ55_10195 IPR029460 DNA polymerase, helix-hairpin-helix motif GJQ55_10195 IPR004013 PHP domain GJQ55_10195 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GJQ55_10195 IPR003141 Polymerase/histidinol phosphatase, N-terminal GJQ55_10195 IPR016195 Polymerase/histidinol phosphatase-like GJQ55_10195 IPR004805 DNA polymerase III, alpha subunit GJQ55_10200 IPR041107 RimK, PreATP-grasp domain GJQ55_10200 IPR013651 ATP-grasp fold, RimK-type GJQ55_10200 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK GJQ55_10200 IPR011761 ATP-grasp fold GJQ55_10200 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX GJQ55_10200 IPR013815 ATP-grasp fold, subdomain 1 GJQ55_10210 IPR018228 Deoxyribonuclease, TatD-related, conserved site GJQ55_10210 IPR015991 Uncharacterised hydrolase TatD-type GJQ55_10210 IPR032466 Metal-dependent hydrolase GJQ55_10210 IPR001130 TatD family GJQ55_10215 IPR036467 Lumazine/riboflavin synthase superfamily GJQ55_10215 IPR002180 Lumazine/riboflavin synthase GJQ55_10215 IPR034964 Lumazine synthase GJQ55_10220 IPR011545 DEAD/DEAH box helicase domain GJQ55_10220 IPR028622 ATP-dependent RNA helicase RhlE GJQ55_10220 IPR014014 RNA helicase, DEAD-box type, Q motif GJQ55_10220 IPR001650 Helicase, C-terminal GJQ55_10220 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_10220 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site GJQ55_10220 IPR014001 Helicase superfamily 1/2, ATP-binding domain GJQ55_10225 IPR036291 NAD(P)-binding domain superfamily GJQ55_10225 IPR020904 Short-chain dehydrogenase/reductase, conserved site GJQ55_10225 IPR002347 Short-chain dehydrogenase/reductase SDR GJQ55_10230 IPR008258 Transglycosylase SLT domain 1 GJQ55_10230 IPR000189 Prokaryotic transglycosylase, active site GJQ55_10230 IPR023703 Membrane-bound lytic murein transglycosylase F GJQ55_10230 IPR023346 Lysozyme-like domain superfamily GJQ55_10230 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF GJQ55_10250 IPR018668 DNA-binding protein VF530-like GJQ55_10250 IPR036361 SAP domain superfamily GJQ55_10275 IPR001844 Chaperonin Cpn60 GJQ55_10275 IPR002423 Chaperonin Cpn60/TCP-1 family GJQ55_10275 IPR027409 GroEL-like apical domain superfamily GJQ55_10275 IPR027413 GroEL-like equatorial domain superfamily GJQ55_10275 IPR027410 TCP-1-like chaperonin intermediate domain superfamily GJQ55_10275 IPR018370 Chaperonin Cpn60, conserved site GJQ55_10280 IPR020818 GroES chaperonin family GJQ55_10280 IPR037124 GroES chaperonin superfamily GJQ55_10280 IPR018369 Chaperonin GroES, conserved site GJQ55_10280 IPR011032 GroES-like superfamily GJQ55_10295 IPR035926 NusB-like superfamily GJQ55_10295 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase GJQ55_10295 IPR004573 rRNA small subunit methyltransferase B GJQ55_10295 IPR023267 RNA (C5-cytosine) methyltransferase GJQ55_10295 IPR006027 NusB/RsmB/TIM44 GJQ55_10295 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GJQ55_10295 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GJQ55_10300 IPR000183 Ornithine/DAP/Arg decarboxylase GJQ55_10300 IPR002433 Ornithine decarboxylase GJQ55_10300 IPR029066 PLP-binding barrel GJQ55_10300 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GJQ55_10300 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site GJQ55_10300 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GJQ55_10300 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GJQ55_10300 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site GJQ55_10305 IPR011527 ABC transporter type 1, transmembrane domain GJQ55_10305 IPR003593 AAA+ ATPase domain GJQ55_10305 IPR036640 ABC transporter type 1, transmembrane domain superfamily GJQ55_10305 IPR003439 ABC transporter-like GJQ55_10305 IPR017871 ABC transporter, conserved site GJQ55_10305 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_10305 IPR039421 Type I protein exporter GJQ55_10310 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain GJQ55_10310 IPR023459 Transcription elongation factor GreA/GreB family GJQ55_10310 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GJQ55_10310 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GJQ55_10310 IPR028625 Regulator of nucleoside diphosphate kinase GJQ55_10320 IPR022764 Peptidase S54, rhomboid domain GJQ55_10320 IPR035952 Rhomboid-like superfamily GJQ55_10325 IPR029045 ClpP/crotonase-like domain superfamily GJQ55_10325 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GJQ55_10325 IPR001753 Enoyl-CoA hydratase/isomerase GJQ55_10325 IPR014748 Enoyl-CoA hydratase, C-terminal GJQ55_10330 IPR001015 Ferrochelatase GJQ55_10330 IPR019772 Ferrochelatase, active site GJQ55_10330 IPR033644 Ferrochelatase, C-terminal GJQ55_10330 IPR033659 Ferrochelatase, N-terminal GJQ55_10335 IPR036259 MFS transporter superfamily GJQ55_10335 IPR004734 Multidrug resistance protein GJQ55_10335 IPR011701 Major facilitator superfamily GJQ55_10335 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GJQ55_10335 IPR020846 Major facilitator superfamily domain GJQ55_10340 IPR032551 HTH-type transcriptional repressor, C-terminal GJQ55_10340 IPR023772 DNA-binding HTH domain, TetR-type, conserved site GJQ55_10340 IPR009057 Homeobox-like domain superfamily GJQ55_10340 IPR001647 DNA-binding HTH domain, TetR-type GJQ55_10360 IPR002792 TRAM domain GJQ55_10360 IPR023404 Radical SAM, alpha/beta horseshoe GJQ55_10360 IPR007197 Radical SAM GJQ55_10360 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GJQ55_10360 IPR020612 Methylthiotransferase, conserved site GJQ55_10360 IPR013848 Methylthiotransferase, N-terminal GJQ55_10360 IPR005839 Methylthiotransferase GJQ55_10360 IPR006638 Elp3/MiaB/NifB GJQ55_10360 IPR038135 Methylthiotransferase, N-terminal domain superfamily GJQ55_10365 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_10365 IPR003714 PhoH-like protein GJQ55_10370 IPR023091 Metalloprotease catalytic domain superfamily, predicted GJQ55_10370 IPR002036 Endoribonuclease YbeY GJQ55_10370 IPR020549 Endoribonuclease YbeY, conserved site GJQ55_10375 IPR000644 CBS domain GJQ55_10375 IPR036318 FAD-binding, type PCMH-like superfamily GJQ55_10375 IPR016169 FAD-binding, type PCMH, subdomain 2 GJQ55_10375 IPR005170 Transporter-associated domain GJQ55_10380 IPR004563 Apolipoprotein N-acyltransferase GJQ55_10380 IPR003010 Carbon-nitrogen hydrolase GJQ55_10380 IPR036526 Carbon-nitrogen hydrolase superfamily GJQ55_10390 IPR003561 Mutator MutT GJQ55_10390 IPR020476 NUDIX hydrolase GJQ55_10390 IPR015797 NUDIX hydrolase-like domain superfamily GJQ55_10390 IPR020084 NUDIX hydrolase, conserved site GJQ55_10390 IPR000086 NUDIX hydrolase domain GJQ55_10395 IPR042195 ArgJ beta chain, C-terminal domain GJQ55_10395 IPR016117 ArgJ-like domain superfamily GJQ55_10395 IPR002813 Arginine biosynthesis protein ArgJ GJQ55_10400 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_10400 IPR004027 SEC-C motif GJQ55_10400 IPR000185 Protein translocase subunit SecA GJQ55_10400 IPR020937 SecA conserved site GJQ55_10400 IPR011115 SecA DEAD-like, N-terminal GJQ55_10400 IPR014018 SecA motor DEAD GJQ55_10400 IPR011130 SecA, preprotein cross-linking domain GJQ55_10400 IPR011116 SecA Wing/Scaffold GJQ55_10400 IPR036266 SecA, Wing/Scaffold superfamily GJQ55_10400 IPR036670 SecA, preprotein cross-linking domain superfamily GJQ55_10405 IPR011055 Duplicated hybrid motif GJQ55_10405 IPR018392 LysM domain GJQ55_10405 IPR016047 Peptidase M23 GJQ55_10405 IPR013731 Opacity-associated protein A, N-terminal GJQ55_10410 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GJQ55_10410 IPR020568 Ribosomal protein S5 domain 2-type fold GJQ55_10410 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GJQ55_10410 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GJQ55_10415 IPR003008 Tubulin/FtsZ, GTPase domain GJQ55_10415 IPR036525 Tubulin/FtsZ, GTPase domain superfamily GJQ55_10415 IPR008280 Tubulin/FtsZ, C-terminal GJQ55_10415 IPR024757 Cell division protein FtsZ, C-terminal GJQ55_10415 IPR020805 Cell division protein FtsZ, conserved site GJQ55_10415 IPR000158 Cell division protein FtsZ GJQ55_10415 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain GJQ55_10420 IPR020823 Cell division protein FtsA GJQ55_10420 IPR003494 SHS2 domain inserted in FtsA GJQ55_10425 IPR005548 Cell division protein FtsQ/DivIB GJQ55_10425 IPR026579 Cell division protein FtsQ GJQ55_10425 IPR034746 POTRA domain GJQ55_10425 IPR013685 POTRA domain, FtsQ-type GJQ55_10430 IPR011761 ATP-grasp fold GJQ55_10430 IPR013815 ATP-grasp fold, subdomain 1 GJQ55_10430 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site GJQ55_10430 IPR005905 D-alanine--D-alanine ligase GJQ55_10430 IPR011095 D-alanine--D-alanine ligase, C-terminal GJQ55_10430 IPR011127 D-alanine--D-alanine ligase, N-terminal domain GJQ55_10430 IPR016185 Pre-ATP-grasp domain superfamily GJQ55_10435 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GJQ55_10435 IPR000713 Mur ligase, N-terminal catalytic domain GJQ55_10435 IPR013221 Mur ligase, central GJQ55_10435 IPR036565 Mur-like, catalytic domain superfamily GJQ55_10435 IPR004101 Mur ligase, C-terminal GJQ55_10435 IPR036615 Mur ligase, C-terminal domain superfamily GJQ55_10440 IPR006009 N-acetylglucosaminyltransferase, MurG GJQ55_10440 IPR007235 Glycosyl transferase, family 28, C-terminal GJQ55_10440 IPR004276 Glycosyltransferase family 28, N-terminal domain GJQ55_10445 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GJQ55_10445 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GJQ55_10445 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GJQ55_10450 IPR036565 Mur-like, catalytic domain superfamily GJQ55_10450 IPR036615 Mur ligase, C-terminal domain superfamily GJQ55_10450 IPR004101 Mur ligase, C-terminal GJQ55_10450 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GJQ55_10450 IPR013221 Mur ligase, central GJQ55_10455 IPR000715 Glycosyl transferase, family 4 GJQ55_10455 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GJQ55_10455 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site GJQ55_10460 IPR036565 Mur-like, catalytic domain superfamily GJQ55_10460 IPR004101 Mur ligase, C-terminal GJQ55_10460 IPR036615 Mur ligase, C-terminal domain superfamily GJQ55_10460 IPR013221 Mur ligase, central GJQ55_10460 IPR000713 Mur ligase, N-terminal catalytic domain GJQ55_10460 IPR035911 MurE/MurF, N-terminal GJQ55_10460 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GJQ55_10465 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GJQ55_10465 IPR035911 MurE/MurF, N-terminal GJQ55_10465 IPR000713 Mur ligase, N-terminal catalytic domain GJQ55_10465 IPR036615 Mur ligase, C-terminal domain superfamily GJQ55_10465 IPR004101 Mur ligase, C-terminal GJQ55_10465 IPR036565 Mur-like, catalytic domain superfamily GJQ55_10465 IPR013221 Mur ligase, central GJQ55_10470 IPR012338 Beta-lactamase/transpeptidase-like GJQ55_10470 IPR037532 Peptidoglycan D,D-transpeptidase FtsI GJQ55_10470 IPR005311 Penicillin-binding protein, dimerisation domain GJQ55_10470 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GJQ55_10470 IPR001460 Penicillin-binding protein, transpeptidase GJQ55_10475 IPR011922 Cell division protein FtsL GJQ55_10480 IPR002903 Ribosomal RNA small subunit methyltransferase H GJQ55_10480 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GJQ55_10480 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase GJQ55_10485 IPR035644 MraZ, C-terminal GJQ55_10485 IPR003444 Transcriptional regulator MraZ GJQ55_10485 IPR020603 MraZ domain GJQ55_10485 IPR035642 MraZ, N-terminal GJQ55_10485 IPR038619 MraZ superfamily GJQ55_10485 IPR007159 SpoVT-AbrB domain GJQ55_10485 IPR037914 SpoVT-AbrB domain superfamily GJQ55_10505 IPR013766 Thioredoxin domain GJQ55_10505 IPR019479 Peroxiredoxin, C-terminal GJQ55_10505 IPR036249 Thioredoxin-like superfamily GJQ55_10505 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GJQ55_10505 IPR024706 Peroxiredoxin, AhpC-type GJQ55_10515 IPR001036 Acriflavin resistance protein GJQ55_10515 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GJQ55_10520 IPR039562 Membrane fusion protein, biotin-lipoyl like domain GJQ55_10520 IPR022824 Multidrug resistance protein MdtA GJQ55_10520 IPR006143 RND efflux pump, membrane fusion protein GJQ55_10525 IPR023769 Nucleoid occlusion factor SlmA GJQ55_10525 IPR009057 Homeobox-like domain superfamily GJQ55_10525 IPR001647 DNA-binding HTH domain, TetR-type GJQ55_10525 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily GJQ55_10530 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site GJQ55_10530 IPR000089 Biotin/lipoyl attachment GJQ55_10530 IPR002930 Glycine cleavage system H-protein GJQ55_10530 IPR033753 Glycine cleavage system H-protein/Simiate GJQ55_10530 IPR017453 Glycine cleavage system H-protein, subgroup GJQ55_10530 IPR011053 Single hybrid motif GJQ55_10545 IPR001757 P-type ATPase GJQ55_10545 IPR023214 HAD superfamily GJQ55_10545 IPR036412 HAD-like superfamily GJQ55_10545 IPR008250 P-type ATPase, A domain superfamily GJQ55_10545 IPR023298 P-type ATPase, transmembrane domain superfamily GJQ55_10545 IPR023299 P-type ATPase, cytoplasmic domain N GJQ55_10545 IPR004014 Cation-transporting P-type ATPase, N-terminal GJQ55_10545 IPR006068 Cation-transporting P-type ATPase, C-terminal GJQ55_10545 IPR018303 P-type ATPase, phosphorylation site GJQ55_10550 IPR006231 Malate:quinone-oxidoreductase GJQ55_10550 IPR036188 FAD/NAD(P)-binding domain superfamily GJQ55_10555 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GJQ55_10560 IPR000089 Biotin/lipoyl attachment GJQ55_10560 IPR011053 Single hybrid motif GJQ55_10560 IPR001882 Biotin-binding site GJQ55_10560 IPR005776 Oxaloacetate decarboxylase, alpha subunit GJQ55_10560 IPR000891 Pyruvate carboxyltransferase GJQ55_10560 IPR013785 Aldolase-type TIM barrel GJQ55_10560 IPR003379 Carboxylase, conserved domain GJQ55_10565 IPR005899 Sodium ion-translocating decarboxylase GJQ55_10565 IPR023424 Oxaloacetate decarboxylase gamma chain, probable GJQ55_10570 IPR018517 tRNA-dihydrouridine synthase, conserved site GJQ55_10570 IPR032886 tRNA-dihydrouridine(16) synthase GJQ55_10570 IPR042270 tRNA-dihydrouridine(16) synthase, C-terminal GJQ55_10570 IPR013785 Aldolase-type TIM barrel GJQ55_10570 IPR035587 DUS-like, FMN-binding domain GJQ55_10570 IPR001269 tRNA-dihydrouridine synthase GJQ55_10580 IPR036282 Glutathione S-transferase, C-terminal domain superfamily GJQ55_10580 IPR040079 Glutathione Transferase family GJQ55_10580 IPR004045 Glutathione S-transferase, N-terminal GJQ55_10580 IPR036249 Thioredoxin-like superfamily GJQ55_10580 IPR010987 Glutathione S-transferase, C-terminal-like GJQ55_10585 IPR006219 DHAP synthase, class 1 GJQ55_10585 IPR006218 DAHP synthetase I/KDSA GJQ55_10585 IPR013785 Aldolase-type TIM barrel GJQ55_10590 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase GJQ55_10590 IPR027555 tRNA (mo5U34)-methyltransferase-like GJQ55_10590 IPR010017 tRNA U34 carboxymethyltransferase GJQ55_10595 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase GJQ55_10595 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GJQ55_10595 IPR041698 Methyltransferase domain 25 GJQ55_10600 IPR003798 DNA recombination RmuC GJQ55_10610 IPR004485 Cobalamin biosynthesis CobD/CbiB GJQ55_10610 IPR031347 Protein AmpE GJQ55_10615 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GJQ55_10615 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GJQ55_10620 IPR001463 Sodium:alanine symporter GJQ55_10625 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GJQ55_10625 IPR004393 Nicotinate-nucleotide pyrophosphorylase GJQ55_10625 IPR013785 Aldolase-type TIM barrel GJQ55_10625 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GJQ55_10625 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily GJQ55_10625 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GJQ55_10625 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD GJQ55_10630 IPR012902 Prokaryotic N-terminal methylation site GJQ55_10630 IPR001082 Fimbrial protein pilin GJQ55_10640 IPR001482 Type II/IV secretion system protein GJQ55_10640 IPR037257 General secretory system II, protein E, N-terminal superfamily GJQ55_10640 IPR013374 ATPase, type IV, pilus assembly, PilB GJQ55_10640 IPR042181 Type II secretion system, protein E, N-terminal GJQ55_10640 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_10640 IPR007831 General secretory system II, protein E, N-terminal GJQ55_10645 IPR003004 GspF/PilC family GJQ55_10645 IPR001992 Type II secretion system conserved site GJQ55_10645 IPR018076 Type II secretion system F domain GJQ55_10645 IPR042094 Type II secretion system F domain superfamily GJQ55_10650 IPR010627 Peptidase A24A, N-terminal GJQ55_10650 IPR014032 Peptidase A24A, prepilin type IV, bacterial GJQ55_10650 IPR000045 Prepilin type IV endopeptidase, peptidase domain GJQ55_10655 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_10655 IPR001977 Dephospho-CoA kinase GJQ55_10660 IPR005584 DNA gyrase inhibitor YacG GJQ55_10660 IPR013088 Zinc finger, NHR/GATA-type GJQ55_10670 IPR029787 Nucleotide cyclase GJQ55_10670 IPR005330 MHYT domain GJQ55_10670 IPR000160 GGDEF domain GJQ55_10670 IPR035919 EAL domain superfamily GJQ55_10670 IPR001633 EAL domain GJQ55_10680 IPR001789 Signal transduction response regulator, receiver domain GJQ55_10680 IPR011006 CheY-like superfamily GJQ55_10680 IPR001633 EAL domain GJQ55_10680 IPR035919 EAL domain superfamily GJQ55_10680 IPR000160 GGDEF domain GJQ55_10680 IPR029787 Nucleotide cyclase GJQ55_10685 IPR036441 Dehydroquinase, class II superfamily GJQ55_10685 IPR001874 Dehydroquinase, class II GJQ55_10685 IPR018509 Dehydroquinase, class II, conserved site GJQ55_10690 IPR004498 Ribosomal protein L11 methyltransferase GJQ55_10690 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase GJQ55_10700 IPR018517 tRNA-dihydrouridine synthase, conserved site GJQ55_10700 IPR001269 tRNA-dihydrouridine synthase GJQ55_10700 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GJQ55_10700 IPR013785 Aldolase-type TIM barrel GJQ55_10700 IPR035587 DUS-like, FMN-binding domain GJQ55_10700 IPR032887 tRNA-dihydrouridine synthase B GJQ55_10700 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GJQ55_10705 IPR002197 DNA binding HTH domain, Fis-type GJQ55_10705 IPR009057 Homeobox-like domain superfamily GJQ55_10705 IPR005412 DNA-binding protein Fis GJQ55_10710 IPR036914 Methylglyoxal synthase-like domain superfamily GJQ55_10710 IPR002695 Bifunctional purine biosynthesis protein PurH-like GJQ55_10710 IPR024051 AICAR transformylase, duplicated domain superfamily GJQ55_10710 IPR011607 Methylglyoxal synthase-like domain GJQ55_10710 IPR016193 Cytidine deaminase-like GJQ55_10715 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GJQ55_10715 IPR011054 Rudiment single hybrid motif GJQ55_10715 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily GJQ55_10715 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GJQ55_10715 IPR000115 Phosphoribosylglycinamide synthetase GJQ55_10715 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain GJQ55_10715 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GJQ55_10715 IPR013815 ATP-grasp fold, subdomain 1 GJQ55_10715 IPR016185 Pre-ATP-grasp domain superfamily GJQ55_10715 IPR011761 ATP-grasp fold GJQ55_10720 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GJQ55_10720 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GJQ55_10720 IPR005467 Histidine kinase domain GJQ55_10720 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GJQ55_10720 IPR003594 Histidine kinase/HSP90-like ATPase GJQ55_10720 IPR015387 LuxQ, periplasmic GJQ55_10720 IPR011006 CheY-like superfamily GJQ55_10720 IPR029151 Periplasmic sensor-like domain superfamily GJQ55_10720 IPR001789 Signal transduction response regulator, receiver domain GJQ55_10720 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GJQ55_10725 IPR041569 AAA ATPase, AAA+ lid domain GJQ55_10725 IPR003959 ATPase, AAA-type, core GJQ55_10725 IPR003960 ATPase, AAA-type, conserved site GJQ55_10725 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_10725 IPR011546 Peptidase M41, FtsH extracellular GJQ55_10725 IPR000642 Peptidase M41 GJQ55_10725 IPR037219 Peptidase M41-like GJQ55_10725 IPR003593 AAA+ ATPase domain GJQ55_10725 IPR005936 Peptidase, FtsH GJQ55_10730 IPR012347 Ferritin-like GJQ55_10730 IPR009078 Ferritin-like superfamily GJQ55_10730 IPR011566 Ubiquinone biosynthesis protein Coq7 GJQ55_10740 IPR023749 Co-chaperone DjlA GJQ55_10740 IPR029024 TerB-like GJQ55_10740 IPR036869 Chaperone J-domain superfamily GJQ55_10740 IPR001623 DnaJ domain GJQ55_10740 IPR007791 Co-chaperone DjlA, N-terminal GJQ55_10745 IPR029044 Nucleotide-diphospho-sugar transferases GJQ55_10745 IPR005835 Nucleotidyl transferase domain GJQ55_10750 IPR011009 Protein kinase-like domain superfamily GJQ55_10750 IPR002575 Aminoglycoside phosphotransferase GJQ55_10755 IPR007543 LptD, C-terminal GJQ55_10755 IPR005653 Organic solvent tolerance-like, N-terminal GJQ55_10755 IPR020889 LPS-assembly protein LptD GJQ55_10760 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GJQ55_10760 IPR027304 Trigger factor/SurA domain superfamily GJQ55_10760 IPR015391 SurA N-terminal GJQ55_10760 IPR023034 Peptidyl-prolyl isomerase SurA GJQ55_10765 IPR005255 PdxA family GJQ55_10765 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase GJQ55_10770 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase GJQ55_10770 IPR011530 Ribosomal RNA adenine dimethylase GJQ55_10770 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GJQ55_10770 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GJQ55_10770 IPR023165 rRNA adenine dimethylase-like GJQ55_10770 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm GJQ55_10775 IPR036767 ApaG domain superfamily GJQ55_10775 IPR007474 ApaG domain GJQ55_10775 IPR023065 Uncharacterised protein family ApaG GJQ55_10780 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GJQ55_10780 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GJQ55_10780 IPR029052 Metallo-dependent phosphatase-like GJQ55_10785 IPR001763 Rhodanese-like domain GJQ55_10785 IPR036873 Rhodanese-like domain superfamily GJQ55_10785 IPR023695 Thiosulfate sulfurtransferase, bacterial GJQ55_10810 IPR012006 tRNA nucleotidyltransferase, proteobacteria GJQ55_10810 IPR003607 HD/PDEase domain GJQ55_10810 IPR006674 HD domain GJQ55_10810 IPR002646 Poly A polymerase, head domain GJQ55_10810 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain GJQ55_10815 IPR006390 Dihydropteroate synthase GJQ55_10815 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GJQ55_10815 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily GJQ55_10815 IPR000489 Pterin-binding domain GJQ55_10815 IPR011005 Dihydropteroate synthase-like GJQ55_10820 IPR006156 Dihydroneopterin aldolase GJQ55_10820 IPR006157 Dihydroneopterin aldolase/epimerase domain GJQ55_10825 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GJQ55_10825 IPR000905 Gcp-like domain GJQ55_10825 IPR017861 Kae1/TsaD family GJQ55_10830 IPR038380 Ribosomal protein S21 superfamily GJQ55_10830 IPR001911 Ribosomal protein S21 GJQ55_10830 IPR018278 Ribosomal protein S21, conserved site GJQ55_10835 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GJQ55_10835 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 GJQ55_10835 IPR019004 Uncharacterised protein YqeY/Aim41 GJQ55_10835 IPR042184 YqeY/Aim41, N-terminal domain GJQ55_10840 IPR002694 Zinc finger, CHC2-type GJQ55_10840 IPR006171 TOPRIM domain GJQ55_10840 IPR034151 Bacterial DnaG primase, TOPRIM domain GJQ55_10840 IPR030846 DNA primase DnaG, bacteria GJQ55_10840 IPR036977 DNA Primase, CHC2-type zinc finger GJQ55_10840 IPR013173 DNA primase DnaG, DnaB-binding domain GJQ55_10840 IPR019475 DNA primase, DnaB-helicase binding domain GJQ55_10840 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily GJQ55_10840 IPR013264 DNA primase, catalytic core, N-terminal GJQ55_10840 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal GJQ55_10840 IPR006295 DNA primase, DnaG GJQ55_10845 IPR014284 RNA polymerase sigma-70 like domain GJQ55_10845 IPR000943 RNA polymerase sigma-70 GJQ55_10845 IPR009042 RNA polymerase sigma-70 region 1.2 GJQ55_10845 IPR007624 RNA polymerase sigma-70 region 3 GJQ55_10845 IPR013325 RNA polymerase sigma factor, region 2 GJQ55_10845 IPR007631 RNA polymerase sigma factor 70, non-essential domain GJQ55_10845 IPR007630 RNA polymerase sigma-70 region 4 GJQ55_10845 IPR036388 Winged helix-like DNA-binding domain superfamily GJQ55_10845 IPR028630 RNA polymerase sigma factor RpoD GJQ55_10845 IPR007627 RNA polymerase sigma-70 region 2 GJQ55_10845 IPR013324 RNA polymerase sigma factor, region 3/4-like GJQ55_10845 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GJQ55_10845 IPR007127 RNA polymerase sigma factor 70, region 1.1 GJQ55_10845 IPR042189 Sigma-70 factor, region 1.1 superfamily GJQ55_10855 IPR036884 [2Fe-2S]-binding domain superfamily GJQ55_10855 IPR036010 2Fe-2S ferredoxin-like superfamily GJQ55_10855 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GJQ55_10855 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GJQ55_10855 IPR002888 [2Fe-2S]-binding GJQ55_10860 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead GJQ55_10860 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GJQ55_10860 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GJQ55_10860 IPR012368 Oxidoreductase molybdopterin-binding subunit, IorB-related GJQ55_10860 IPR006311 Twin-arginine translocation pathway, signal sequence GJQ55_10860 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily GJQ55_10865 IPR003777 XdhC- CoxI GJQ55_10865 IPR027051 XdhC Rossmann domain GJQ55_10880 IPR042099 AMP-dependent synthetase-like superfamily GJQ55_10880 IPR000873 AMP-dependent synthetase/ligase GJQ55_10880 IPR025110 AMP-binding enzyme, C-terminal domain GJQ55_10880 IPR020845 AMP-binding, conserved site GJQ55_10890 IPR004779 Carboxylate/Amino Acid/Amine Transporter GJQ55_10890 IPR000620 EamA domain GJQ55_10895 IPR001123 Amino acid exporter protein, LeuE-type GJQ55_10895 IPR004778 Homoserine/Threonine efflux protein GJQ55_10900 IPR011006 CheY-like superfamily GJQ55_10900 IPR000160 GGDEF domain GJQ55_10900 IPR029787 Nucleotide cyclase GJQ55_10900 IPR001789 Signal transduction response regulator, receiver domain GJQ55_10925 IPR033664 tRNA 5-carboxymethoxyuridine methyltransferase GJQ55_10925 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase GJQ55_10950 IPR036107 Carbon storage regulator superfamily GJQ55_10950 IPR003751 Translational regulator CsrA GJQ55_10955 IPR002912 ACT domain GJQ55_10955 IPR041740 Aspartokinase catalytic domain GJQ55_10955 IPR001048 Aspartate/glutamate/uridylate kinase GJQ55_10955 IPR005260 Aspartate kinase, monofunctional class GJQ55_10955 IPR001341 Aspartate kinase GJQ55_10955 IPR018042 Aspartate kinase, conserved site GJQ55_10955 IPR036393 Acetylglutamate kinase-like superfamily GJQ55_10955 IPR027795 CASTOR, ACT domain GJQ55_10960 IPR003156 DHHA1 domain GJQ55_10960 IPR002318 Alanine-tRNA ligase, class IIc GJQ55_10960 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily GJQ55_10960 IPR018165 Alanyl-tRNA synthetase, class IIc, core domain GJQ55_10960 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GJQ55_10960 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GJQ55_10960 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GJQ55_10960 IPR009000 Translation protein, beta-barrel domain superfamily GJQ55_10960 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GJQ55_10980 IPR029058 Alpha/Beta hydrolase fold GJQ55_10980 IPR000639 Epoxide hydrolase-like GJQ55_10980 IPR000073 Alpha/beta hydrolase fold-1 GJQ55_10985 IPR036188 FAD/NAD(P)-binding domain superfamily GJQ55_10985 IPR023753 FAD/NAD(P)-binding domain GJQ55_10990 IPR003783 Regulatory protein RecX GJQ55_10990 IPR036388 Winged helix-like DNA-binding domain superfamily GJQ55_10995 IPR020587 DNA recombination and repair protein RecA, monomer-monomer interface GJQ55_10995 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain GJQ55_10995 IPR003593 AAA+ ATPase domain GJQ55_10995 IPR013765 DNA recombination and repair protein RecA GJQ55_10995 IPR023400 DNA recombination and repair protein RecA, C-terminal GJQ55_10995 IPR020584 DNA recombination/repair protein RecA, conserved site GJQ55_10995 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_11000 IPR036653 CinA-like, C-terminal GJQ55_11000 IPR008136 CinA, C-terminal GJQ55_11005 IPR036678 MutS, connector domain superfamily GJQ55_11005 IPR005748 DNA mismatch repair protein MutS GJQ55_11005 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GJQ55_11005 IPR017261 DNA mismatch repair protein MutS/MSH GJQ55_11005 IPR000432 DNA mismatch repair protein MutS, C-terminal GJQ55_11005 IPR007861 DNA mismatch repair protein MutS, clamp GJQ55_11005 IPR007696 DNA mismatch repair protein MutS, core GJQ55_11005 IPR016151 DNA mismatch repair protein MutS, N-terminal GJQ55_11005 IPR036187 DNA mismatch repair protein MutS, core domain superfamily GJQ55_11005 IPR007860 DNA mismatch repair protein MutS, connector domain GJQ55_11005 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_11010 IPR022569 Ferredoxin, C-terminal GJQ55_11010 IPR000813 7Fe ferredoxin GJQ55_11010 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site GJQ55_11010 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain GJQ55_11015 IPR012761 RNA polymerase sigma factor RpoS GJQ55_11015 IPR014284 RNA polymerase sigma-70 like domain GJQ55_11015 IPR000943 RNA polymerase sigma-70 GJQ55_11015 IPR009042 RNA polymerase sigma-70 region 1.2 GJQ55_11015 IPR007627 RNA polymerase sigma-70 region 2 GJQ55_11015 IPR007624 RNA polymerase sigma-70 region 3 GJQ55_11015 IPR007630 RNA polymerase sigma-70 region 4 GJQ55_11015 IPR013324 RNA polymerase sigma factor, region 3/4-like GJQ55_11015 IPR036388 Winged helix-like DNA-binding domain superfamily GJQ55_11015 IPR013325 RNA polymerase sigma factor, region 2 GJQ55_11020 IPR018392 LysM domain GJQ55_11020 IPR016047 Peptidase M23 GJQ55_11020 IPR011055 Duplicated hybrid motif GJQ55_11020 IPR036779 LysM domain superfamily GJQ55_11030 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GJQ55_11030 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase GJQ55_11035 IPR030048 Survival protein SurE GJQ55_11035 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GJQ55_11035 IPR036523 SurE-like phosphatase/nucleotidase superfamily GJQ55_11040 IPR011760 Pseudouridine synthase, TruD, insertion domain GJQ55_11040 IPR020119 Pseudouridine synthase TruD, conserved site GJQ55_11040 IPR001656 Pseudouridine synthase, TruD GJQ55_11040 IPR020103 Pseudouridine synthase, catalytic domain superfamily GJQ55_11040 IPR042214 Pseudouridine synthase, TruD, catalytic domain GJQ55_11045 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GJQ55_11045 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GJQ55_11045 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GJQ55_11050 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GJQ55_11050 IPR034683 Cytidylyltransferase IspD/TarI GJQ55_11050 IPR029044 Nucleotide-diphospho-sugar transferases GJQ55_11050 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GJQ55_11055 IPR023081 Cell division protein FtsB GJQ55_11055 IPR007060 Septum formation initiator FtsL/DivIC GJQ55_11060 IPR029017 Enolase-like, N-terminal GJQ55_11060 IPR020810 Enolase, C-terminal TIM barrel domain GJQ55_11060 IPR020809 Enolase, conserved site GJQ55_11060 IPR000941 Enolase GJQ55_11060 IPR036849 Enolase-like, C-terminal domain superfamily GJQ55_11060 IPR020811 Enolase, N-terminal GJQ55_11065 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_11065 IPR033828 CTP synthase GATase domain GJQ55_11065 IPR017456 CTP synthase, N-terminal GJQ55_11065 IPR004468 CTP synthase GJQ55_11065 IPR029062 Class I glutamine amidotransferase-like GJQ55_11065 IPR017926 Glutamine amidotransferase GJQ55_11075 IPR002898 MotA/TolQ/ExbB proton channel GJQ55_11075 IPR000540 Flagellar motor protein MotA, conserved site GJQ55_11080 IPR036737 OmpA-like domain superfamily GJQ55_11080 IPR006665 OmpA-like domain GJQ55_11080 IPR025713 Motility protein B, N-terminal domain GJQ55_11090 IPR003660 HAMP domain GJQ55_11090 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GJQ55_11100 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 GJQ55_11100 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily GJQ55_11105 IPR036034 PDZ superfamily GJQ55_11105 IPR001940 Peptidase S1C GJQ55_11105 IPR001478 PDZ domain GJQ55_11105 IPR011782 Peptidase S1C, Do GJQ55_11105 IPR009003 Peptidase S1, PA clan GJQ55_11110 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GJQ55_11110 IPR004839 Aminotransferase, class I/classII GJQ55_11110 IPR005861 Histidinol-phosphate aminotransferase family GJQ55_11110 IPR015424 Pyridoxal phosphate-dependent transferase GJQ55_11110 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GJQ55_11110 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GJQ55_11115 IPR001692 Histidinol dehydrogenase, conserved site GJQ55_11115 IPR022695 Histidinol dehydrogenase, monofunctional GJQ55_11115 IPR012131 Histidinol dehydrogenase GJQ55_11115 IPR016161 Aldehyde/histidinol dehydrogenase GJQ55_11120 IPR001348 ATP phosphoribosyltransferase HisG GJQ55_11120 IPR024893 ATP phosphoribosyltransferase HisG, short form GJQ55_11120 IPR018198 ATP phosphoribosyltransferase, conserved site GJQ55_11120 IPR013820 ATP phosphoribosyltransferase, catalytic domain GJQ55_11125 IPR001986 Enolpyruvate transferase domain GJQ55_11125 IPR036968 Enolpyruvate transferase domain superfamily GJQ55_11125 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GJQ55_11125 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GJQ55_11130 IPR002634 BolA protein GJQ55_11130 IPR036065 BolA-like superfamily GJQ55_11140 IPR003399 Mce/MlaD GJQ55_11140 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GJQ55_11145 IPR003453 ABC transport permease subunit MlaE, Proteobacteria GJQ55_11145 IPR030802 ABC transporter permease MalE GJQ55_11150 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_11150 IPR017871 ABC transporter, conserved site GJQ55_11150 IPR030296 Probable ABC transporter ATP-binding protein MlaF/Mkl GJQ55_11150 IPR003593 AAA+ ATPase domain GJQ55_11150 IPR003439 ABC transporter-like GJQ55_11155 IPR004481 Sodium/potassium/calcium exchanger GJQ55_11155 IPR004837 Sodium/calcium exchanger membrane region GJQ55_11160 IPR035474 KpsF-like, SIS domain GJQ55_11160 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GJQ55_11160 IPR000644 CBS domain GJQ55_11160 IPR001347 Sugar isomerase (SIS) GJQ55_11170 IPR014340 Lipopolysaccharide export system protein LptA GJQ55_11170 IPR005653 Organic solvent tolerance-like, N-terminal GJQ55_11175 IPR003593 AAA+ ATPase domain GJQ55_11175 IPR003439 ABC transporter-like GJQ55_11175 IPR017871 ABC transporter, conserved site GJQ55_11175 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GJQ55_11175 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal GJQ55_11175 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_11180 IPR000394 RNA polymerase sigma factor 54 GJQ55_11180 IPR007634 RNA polymerase sigma factor 54, DNA-binding GJQ55_11180 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily GJQ55_11180 IPR007046 RNA polymerase sigma factor 54, core-binding domain GJQ55_11185 IPR003489 Ribosome hibernation promoting factor/RaiA GJQ55_11185 IPR036567 Ribosome hibernation promotion factor-like GJQ55_11190 IPR016152 Phosphotransferase/anion transporter GJQ55_11190 IPR002178 PTS EIIA type-2 domain GJQ55_11190 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN GJQ55_11195 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_11195 IPR005337 RapZ-like family GJQ55_11200 IPR000032 Phosphocarrier protein HPr-like GJQ55_11200 IPR035895 HPr-like superfamily GJQ55_11200 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site GJQ55_11200 IPR002114 Phosphotransferase system, HPr serine phosphorylation site GJQ55_11205 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GJQ55_11205 IPR006667 SLC41 divalent cation transporters, integral membrane domain GJQ55_11205 IPR006669 Magnesium transporter MgtE GJQ55_11205 IPR038048 Magnesium transporter MgtE, transmembrane domain GJQ55_11205 IPR038076 MgtE, N-terminal domain superfamily GJQ55_11205 IPR006668 Magnesium transporter, MgtE intracellular domain GJQ55_11205 IPR000644 CBS domain GJQ55_11210 IPR023153 PSPTO4464-like domain superfamily GJQ55_11210 IPR006839 Ribosome-associated, YjgA GJQ55_11215 IPR003010 Carbon-nitrogen hydrolase GJQ55_11215 IPR036526 Carbon-nitrogen hydrolase superfamily GJQ55_11215 IPR001110 Uncharacterised protein family UPF0012, conserved site GJQ55_11225 IPR003029 S1 domain GJQ55_11225 IPR012340 Nucleic acid-binding, OB-fold GJQ55_11225 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GJQ55_11225 IPR004659 Ribonuclease E/G GJQ55_11225 IPR022967 RNA-binding domain, S1 GJQ55_11230 IPR029001 Inosine triphosphate pyrophosphatase-like GJQ55_11230 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein GJQ55_11240 IPR042175 Cell/Rod shape-determining protein MreC, domain 2 GJQ55_11240 IPR042177 Cell/Rod shape-determining protein MreC, domain 1 GJQ55_11240 IPR007221 Rod shape-determining protein MreC GJQ55_11245 IPR004753 Cell shape determining protein MreB GJQ55_11250 IPR003837 Glu-tRNAGln amidotransferase C subunit GJQ55_11250 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C GJQ55_11255 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GJQ55_11255 IPR023631 Amidase signature domain GJQ55_11255 IPR000120 Amidase GJQ55_11255 IPR036928 Amidase signature (AS) superfamily GJQ55_11255 IPR020556 Amidase, conserved site GJQ55_11260 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GJQ55_11260 IPR017959 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E GJQ55_11260 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GJQ55_11260 IPR018027 Asn/Gln amidotransferase GJQ55_11260 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GJQ55_11260 IPR042114 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 1 GJQ55_11260 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 GJQ55_11260 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GJQ55_11260 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GJQ55_11270 IPR007481 Stringent starvation protein B GJQ55_11270 IPR036760 SspB-like superfamily GJQ55_11275 IPR004046 Glutathione S-transferase, C-terminal GJQ55_11275 IPR036249 Thioredoxin-like superfamily GJQ55_11275 IPR034341 Stringent starvation protein A, N-terminal GJQ55_11275 IPR004045 Glutathione S-transferase, N-terminal GJQ55_11275 IPR040079 Glutathione Transferase family GJQ55_11275 IPR036282 Glutathione S-transferase, C-terminal domain superfamily GJQ55_11275 IPR010987 Glutathione S-transferase, C-terminal-like GJQ55_11280 IPR009056 Cytochrome c-like domain GJQ55_11280 IPR036909 Cytochrome c-like domain superfamily GJQ55_11280 IPR002326 Cytochrome c1 GJQ55_11285 IPR005798 Cytochrome b/b6, C-terminal GJQ55_11285 IPR036150 Cytochrome b/b6, C-terminal domain superfamily GJQ55_11285 IPR005797 Cytochrome b/b6, N-terminal GJQ55_11285 IPR027387 Cytochrome b/b6-like domain superfamily GJQ55_11285 IPR030689 Cytochrome b GJQ55_11285 IPR016174 Di-haem cytochrome, transmembrane GJQ55_11290 IPR014349 Rieske iron-sulphur protein GJQ55_11290 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GJQ55_11290 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GJQ55_11290 IPR005805 Rieske iron-sulphur protein, C-terminal GJQ55_11290 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GJQ55_11290 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal GJQ55_11295 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup GJQ55_11295 IPR000754 Ribosomal protein S9 GJQ55_11295 IPR023035 Ribosomal protein S9, bacterial/plastid GJQ55_11295 IPR020574 Ribosomal protein S9, conserved site GJQ55_11295 IPR020568 Ribosomal protein S5 domain 2-type fold GJQ55_11300 IPR005822 Ribosomal protein L13 GJQ55_11300 IPR005823 Ribosomal protein L13, bacterial-type GJQ55_11300 IPR023563 Ribosomal protein L13, conserved site GJQ55_11300 IPR036899 Ribosomal protein L13 superfamily GJQ55_11310 IPR000795 Transcription factor, GTP-binding domain GJQ55_11310 IPR009000 Translation protein, beta-barrel domain superfamily GJQ55_11310 IPR005225 Small GTP-binding protein domain GJQ55_11310 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily GJQ55_11310 IPR032090 Peptide chain release factor 3, C-terminal GJQ55_11310 IPR041732 Peptide chain release factor 3, GTP-binding domain GJQ55_11310 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_11310 IPR031157 Tr-type G domain, conserved site GJQ55_11310 IPR035647 EF-G domain III/V-like GJQ55_11310 IPR004548 Peptide chain release factor 3 GJQ55_11320 IPR011006 CheY-like superfamily GJQ55_11320 IPR001789 Signal transduction response regulator, receiver domain GJQ55_11330 IPR000182 GNAT domain GJQ55_11330 IPR016181 Acyl-CoA N-acyltransferase GJQ55_11330 IPR006464 N-acetyltransferase RimI/Ard1 GJQ55_11340 IPR005671 2-isopropylmalate synthase, bacterial-type GJQ55_11340 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GJQ55_11340 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GJQ55_11340 IPR013785 Aldolase-type TIM barrel GJQ55_11340 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily GJQ55_11340 IPR000891 Pyruvate carboxyltransferase GJQ55_11345 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain GJQ55_11345 IPR035671 DsbD gamma GJQ55_11345 IPR022910 Thiol:disulphide interchange protein DsbD GJQ55_11345 IPR017937 Thioredoxin, conserved site GJQ55_11345 IPR036249 Thioredoxin-like superfamily GJQ55_11345 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GJQ55_11345 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily GJQ55_11345 IPR013766 Thioredoxin domain GJQ55_11350 IPR024932 Flavin transferase ApbE GJQ55_11350 IPR003374 ApbE-like superfamily GJQ55_11350 IPR042159 Flavin-trafficking protein ApbE GJQ55_11360 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GJQ55_11360 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GJQ55_11360 IPR001278 Arginine-tRNA ligase GJQ55_11360 IPR005148 Arginyl tRNA synthetase N-terminal domain GJQ55_11360 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GJQ55_11360 IPR035684 Arginyl-tRNA synthetase, catalytic core domain GJQ55_11360 IPR008909 DALR anticodon binding GJQ55_11360 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold GJQ55_11365 IPR023048 NADH-azoreductase, FMN-dependent GJQ55_11365 IPR029039 Flavoprotein-like superfamily GJQ55_11365 IPR003680 Flavodoxin-like fold GJQ55_11370 IPR001279 Metallo-beta-lactamase GJQ55_11370 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like GJQ55_11370 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain GJQ55_11370 IPR042173 Ribonuclease J, domain 2 GJQ55_11370 IPR030854 Ribonuclease J, bacteria GJQ55_11370 IPR041636 Ribonuclease J, C-terminal GJQ55_11380 IPR004471 Branched-chain amino acid transport, AzlC GJQ55_11380 IPR011606 Branched-chain amino acid transport, permease GJQ55_11385 IPR008407 Branched-chain amino acid transport, AzlD GJQ55_11395 IPR004404 Dihydroxy-acid dehydratase GJQ55_11395 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GJQ55_11395 IPR042096 Dihydroxy-acid dehydratase, C-terminal GJQ55_11395 IPR037237 IlvD/EDD, N-terminal domain GJQ55_11395 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GJQ55_11400 IPR003593 AAA+ ATPase domain GJQ55_11400 IPR003439 ABC transporter-like GJQ55_11400 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_11405 IPR019808 Histidine triad, conserved site GJQ55_11405 IPR001310 Histidine triad (HIT) protein GJQ55_11405 IPR011146 HIT-like domain GJQ55_11405 IPR036265 HIT-like superfamily GJQ55_11425 IPR000462 CDP-alcohol phosphatidyltransferase GJQ55_11425 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase GJQ55_11430 IPR036390 Winged helix DNA-binding domain superfamily GJQ55_11430 IPR036388 Winged helix-like DNA-binding domain superfamily GJQ55_11430 IPR000847 Transcription regulator HTH, LysR GJQ55_11430 IPR037404 HTH-type transcriptional activator IlvY, PBP2 domain GJQ55_11430 IPR005119 LysR, substrate-binding GJQ55_11435 IPR013116 Ketol-acid reductoisomerase, N-terminal GJQ55_11435 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GJQ55_11435 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GJQ55_11435 IPR013023 Ketol-acid reductoisomerase GJQ55_11435 IPR000506 Ketol-acid reductoisomerase, C-terminal GJQ55_11435 IPR036291 NAD(P)-binding domain superfamily GJQ55_11440 IPR001633 EAL domain GJQ55_11440 IPR035919 EAL domain superfamily GJQ55_11440 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain GJQ55_11445 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GJQ55_11445 IPR015424 Pyridoxal phosphate-dependent transferase GJQ55_11445 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GJQ55_11445 IPR019880 4-dedimethylamino-4-oxo-anhydrotetracycline transaminase OxyQ GJQ55_11445 IPR004839 Aminotransferase, class I/classII GJQ55_11450 IPR003808 Fe-S metabolism associated domain, SufE-like GJQ55_11455 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GJQ55_11455 IPR003660 HAMP domain GJQ55_11460 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_11460 IPR003593 AAA+ ATPase domain GJQ55_11460 IPR025857 MacB-like periplasmic core domain GJQ55_11460 IPR017911 ABC transporter, macrolide export, ATP-binding domain GJQ55_11460 IPR017871 ABC transporter, conserved site GJQ55_11460 IPR003439 ABC transporter-like GJQ55_11460 IPR003838 ABC transporter permease protein domain GJQ55_11465 IPR017911 ABC transporter, macrolide export, ATP-binding domain GJQ55_11465 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_11465 IPR017871 ABC transporter, conserved site GJQ55_11465 IPR003593 AAA+ ATPase domain GJQ55_11465 IPR003838 ABC transporter permease protein domain GJQ55_11465 IPR003439 ABC transporter-like GJQ55_11465 IPR025857 MacB-like periplasmic core domain GJQ55_11475 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GJQ55_11475 IPR003423 Outer membrane efflux protein GJQ55_11480 IPR013785 Aldolase-type TIM barrel GJQ55_11480 IPR000771 Fructose-bisphosphate aldolase, class-II GJQ55_11480 IPR006412 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype GJQ55_11485 IPR001576 Phosphoglycerate kinase GJQ55_11485 IPR015911 Phosphoglycerate kinase, conserved site GJQ55_11485 IPR015824 Phosphoglycerate kinase, N-terminal GJQ55_11485 IPR036043 Phosphoglycerate kinase superfamily GJQ55_11490 IPR036291 NAD(P)-binding domain superfamily GJQ55_11490 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GJQ55_11490 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GJQ55_11490 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GJQ55_11490 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GJQ55_11490 IPR006422 D-erythrose-4-phosphate dehydrogenase GJQ55_11490 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GJQ55_11495 IPR011251 Luciferase-like domain GJQ55_11495 IPR036661 Luciferase-like domain superfamily GJQ55_11495 IPR019949 Luciferase family oxidoreductase, group 1 GJQ55_11505 IPR037152 L-asparaginase, N-terminal domain superfamily GJQ55_11505 IPR041725 Type I (cytosolic) L-asparaginase GJQ55_11505 IPR027474 L-asparaginase, N-terminal GJQ55_11505 IPR040919 Asparaginase/glutaminase, C-terminal GJQ55_11505 IPR027473 L-asparaginase, C-terminal GJQ55_11505 IPR006033 Type I L-asparaginase family GJQ55_11505 IPR036152 Asparaginase/glutaminase-like superfamily GJQ55_11505 IPR006034 Asparaginase/glutaminase-like GJQ55_11505 IPR020827 Asparaginase/glutaminase, active site 1 GJQ55_11505 IPR027475 Asparaginase/glutaminase, active site 2 GJQ55_11510 IPR011009 Protein kinase-like domain superfamily GJQ55_11510 IPR003846 Protein adenylyltransferase SelO GJQ55_11515 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase GJQ55_11515 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GJQ55_11515 IPR005835 Nucleotidyl transferase domain GJQ55_11515 IPR029044 Nucleotide-diphospho-sugar transferases GJQ55_11515 IPR014710 RmlC-like jelly roll fold GJQ55_11515 IPR011051 RmlC-like cupin domain superfamily GJQ55_11520 IPR029052 Metallo-dependent phosphatase-like GJQ55_11520 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GJQ55_11520 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase GJQ55_11525 IPR020103 Pseudouridine synthase, catalytic domain superfamily GJQ55_11525 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GJQ55_11525 IPR006145 Pseudouridine synthase, RsuA/RluA GJQ55_11525 IPR002942 RNA-binding S4 domain GJQ55_11525 IPR036986 RNA-binding S4 domain superfamily GJQ55_11525 IPR006225 Pseudouridine synthase, RluC/RluD GJQ55_11550 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily GJQ55_11550 IPR009614 Toxin YoeB GJQ55_11555 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM GJQ55_11555 IPR036165 YefM-like superfamily GJQ55_11560 IPR036188 FAD/NAD(P)-binding domain superfamily GJQ55_11560 IPR028348 FAD dependent protein GJQ55_11565 IPR029064 50S ribosomal protein L30e-like GJQ55_11565 IPR001537 tRNA/rRNA methyltransferase, SpoU type GJQ55_11565 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GJQ55_11565 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal GJQ55_11565 IPR029028 Alpha/beta knot methyltransferases GJQ55_11575 IPR005119 LysR, substrate-binding GJQ55_11575 IPR037406 HTH-type transcriptional regulator MetR, PBP2 domain GJQ55_11575 IPR000847 Transcription regulator HTH, LysR GJQ55_11575 IPR036388 Winged helix-like DNA-binding domain superfamily GJQ55_11575 IPR036390 Winged helix DNA-binding domain superfamily GJQ55_11585 IPR038071 UROD/MetE-like superfamily GJQ55_11585 IPR006276 Cobalamin-independent methionine synthase GJQ55_11585 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GJQ55_11585 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GJQ55_11590 IPR002781 Transmembrane protein TauE-like GJQ55_11595 IPR036291 NAD(P)-binding domain superfamily GJQ55_11595 IPR020904 Short-chain dehydrogenase/reductase, conserved site GJQ55_11595 IPR002347 Short-chain dehydrogenase/reductase SDR GJQ55_11605 IPR033247 Transketolase family GJQ55_11605 IPR005474 Transketolase, N-terminal GJQ55_11605 IPR033248 Transketolase, C-terminal domain GJQ55_11605 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GJQ55_11605 IPR005478 Transketolase, bacterial-like GJQ55_11605 IPR005475 Transketolase-like, pyrimidine-binding domain GJQ55_11605 IPR029061 Thiamin diphosphate-binding fold GJQ55_11605 IPR020826 Transketolase binding site GJQ55_11610 IPR020988 Peptidase U32, collagenase GJQ55_11610 IPR001539 Peptidase U32 GJQ55_11615 IPR004681 TRAP transporter large membrane protein DctM GJQ55_11615 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit GJQ55_11625 IPR026289 Solute binding protein, TakP-like GJQ55_11625 IPR041722 Alpha-keto acid binding periplasmic protein GJQ55_11625 IPR018389 TRAP transporter solute receptor DctP/TeaA GJQ55_11625 IPR038404 TRAP transporter solute receptor DctP superfamily GJQ55_11630 IPR007351 Uncharacterised protein YjbR GJQ55_11630 IPR038056 YjbR-like superfamily GJQ55_11635 IPR029066 PLP-binding barrel GJQ55_11635 IPR011079 Alanine racemase, C-terminal GJQ55_11635 IPR001608 Alanine racemase, N-terminal GJQ55_11635 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GJQ55_11635 IPR000821 Alanine racemase GJQ55_11635 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site GJQ55_11665 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_11665 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal GJQ55_11665 IPR007693 DNA helicase, DnaB-like, N-terminal GJQ55_11665 IPR007692 DNA helicase, DnaB type GJQ55_11665 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GJQ55_11665 IPR003593 AAA+ ATPase domain GJQ55_11665 IPR007694 DNA helicase, DnaB-like, C-terminal GJQ55_11670 IPR000244 Ribosomal protein L9 GJQ55_11670 IPR009027 Ribosomal protein L9/RNase H1, N-terminal GJQ55_11670 IPR020594 Ribosomal protein L9, bacteria/chloroplast GJQ55_11670 IPR020069 Ribosomal protein L9, C-terminal GJQ55_11670 IPR036791 Ribosomal protein L9, C-terminal domain superfamily GJQ55_11670 IPR020070 Ribosomal protein L9, N-terminal GJQ55_11670 IPR036935 Ribosomal protein L9, N-terminal domain superfamily GJQ55_11680 IPR001648 Ribosomal protein S18 GJQ55_11680 IPR018275 Ribosomal protein S18, conserved site GJQ55_11680 IPR036870 Ribosomal protein S18 superfamily GJQ55_11685 IPR020815 Ribosomal protein S6, conserved site GJQ55_11685 IPR020814 Ribosomal protein S6, plastid/chloroplast GJQ55_11685 IPR035980 Ribosomal protein S6 superfamily GJQ55_11685 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 GJQ55_11685 IPR000529 Ribosomal protein S6 GJQ55_11700 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GJQ55_11700 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GJQ55_11700 IPR023042 Peptidase M17, leucine aminopeptidase GJQ55_11700 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GJQ55_11705 IPR001765 Carbonic anhydrase GJQ55_11705 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GJQ55_11705 IPR036874 Carbonic anhydrase superfamily GJQ55_11710 IPR011053 Single hybrid motif GJQ55_11710 IPR013785 Aldolase-type TIM barrel GJQ55_11710 IPR000089 Biotin/lipoyl attachment GJQ55_11710 IPR003379 Carboxylase, conserved domain GJQ55_11710 IPR005776 Oxaloacetate decarboxylase, alpha subunit GJQ55_11710 IPR000891 Pyruvate carboxyltransferase GJQ55_11710 IPR001882 Biotin-binding site GJQ55_11715 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GJQ55_11715 IPR011761 ATP-grasp fold GJQ55_11715 IPR005481 Biotin carboxylase-like, N-terminal domain GJQ55_11715 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GJQ55_11715 IPR016185 Pre-ATP-grasp domain superfamily GJQ55_11715 IPR011054 Rudiment single hybrid motif GJQ55_11715 IPR005482 Biotin carboxylase, C-terminal GJQ55_11715 IPR011764 Biotin carboxylation domain GJQ55_11720 IPR005119 LysR, substrate-binding GJQ55_11720 IPR000847 Transcription regulator HTH, LysR GJQ55_11720 IPR036388 Winged helix-like DNA-binding domain superfamily GJQ55_11720 IPR036390 Winged helix DNA-binding domain superfamily GJQ55_11725 IPR012081 Alkyl hydroperoxide reductase subunit F GJQ55_11725 IPR036188 FAD/NAD(P)-binding domain superfamily GJQ55_11725 IPR036249 Thioredoxin-like superfamily GJQ55_11725 IPR012336 Thioredoxin-like fold GJQ55_11725 IPR023753 FAD/NAD(P)-binding domain GJQ55_11725 IPR002109 Glutaredoxin GJQ55_11725 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GJQ55_11730 IPR017559 Alkyl hydroperoxide reductase subunit C GJQ55_11730 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GJQ55_11730 IPR024706 Peroxiredoxin, AhpC-type GJQ55_11730 IPR019479 Peroxiredoxin, C-terminal GJQ55_11730 IPR036249 Thioredoxin-like superfamily GJQ55_11730 IPR013766 Thioredoxin domain GJQ55_11735 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal GJQ55_11735 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GJQ55_11735 IPR001537 tRNA/rRNA methyltransferase, SpoU type GJQ55_11735 IPR029028 Alpha/beta knot methyltransferases GJQ55_11735 IPR029064 50S ribosomal protein L30e-like GJQ55_11735 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB GJQ55_11735 IPR004441 RNA methyltransferase TrmH family GJQ55_11740 IPR040476 RNase II/RNase R, cold shock domain GJQ55_11740 IPR012340 Nucleic acid-binding, OB-fold GJQ55_11740 IPR011129 Cold shock domain GJQ55_11740 IPR001900 Ribonuclease II/R GJQ55_11740 IPR022966 Ribonuclease II/R, conserved site GJQ55_11740 IPR004476 Ribonuclease II/ribonuclease R GJQ55_11740 IPR011805 Ribonuclease R GJQ55_11740 IPR013668 Ribonuclease R winged-helix domain GJQ55_11740 IPR022967 RNA-binding domain, S1 GJQ55_11740 IPR003029 S1 domain GJQ55_11740 IPR013223 Ribonuclease B, N-terminal OB domain GJQ55_11750 IPR004090 Chemotaxis methyl-accepting receptor GJQ55_11750 IPR003660 HAMP domain GJQ55_11750 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GJQ55_11750 IPR033480 Single Cache domain 2 GJQ55_11755 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_11755 IPR003593 AAA+ ATPase domain GJQ55_11755 IPR019489 Clp ATPase, C-terminal GJQ55_11755 IPR004491 Heat shock protein HslU GJQ55_11755 IPR003959 ATPase, AAA-type, core GJQ55_11760 IPR022281 ATP-dependent protease, HslV subunit GJQ55_11760 IPR029055 Nucleophile aminohydrolases, N-terminal GJQ55_11760 IPR001353 Proteasome, subunit alpha/beta GJQ55_11760 IPR023333 Proteasome B-type subunit GJQ55_11765 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GJQ55_11785 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like GJQ55_11785 IPR001279 Metallo-beta-lactamase GJQ55_11795 IPR002150 Ribosomal protein L31 GJQ55_11795 IPR027491 Ribosomal protein L31 type A GJQ55_11795 IPR042105 Ribosomal protein L31 superfamily GJQ55_11795 IPR034704 L28p-like GJQ55_11800 IPR040498 PriA DNA helicase, Cys-rich region (CRR) domain GJQ55_11800 IPR042115 Primosomal protein N', 3' DNA-binding domain superfamily GJQ55_11800 IPR041222 Primosomal protein N', 3' DNA-binding domain GJQ55_11800 IPR041236 Primosomal protein N, C-terminal domain GJQ55_11800 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_11800 IPR014001 Helicase superfamily 1/2, ATP-binding domain GJQ55_11800 IPR011545 DEAD/DEAH box helicase domain GJQ55_11800 IPR005259 Primosomal protein N' GJQ55_11800 IPR001650 Helicase, C-terminal GJQ55_11805 IPR026037 Phosphatidylglycerophosphatase A GJQ55_11805 IPR036681 PgpA-like superfamily GJQ55_11805 IPR007686 YutG/PgpA domain GJQ55_11810 IPR009057 Homeobox-like domain superfamily GJQ55_11810 IPR001647 DNA-binding HTH domain, TetR-type GJQ55_11810 IPR019915 Transcription regulator, pyrimidine utilisation, RutR GJQ55_11810 IPR013573 Transcription regulator YcdC, C-terminal GJQ55_11810 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily GJQ55_11820 IPR038071 UROD/MetE-like superfamily GJQ55_11820 IPR006361 Uroporphyrinogen decarboxylase HemE GJQ55_11820 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GJQ55_11830 IPR028261 Dihydroprymidine dehydrogenase domain II GJQ55_11830 IPR036188 FAD/NAD(P)-binding domain superfamily GJQ55_11830 IPR023753 FAD/NAD(P)-binding domain GJQ55_11830 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GJQ55_11830 IPR009051 Alpha-helical ferredoxin GJQ55_11835 IPR002489 Glutamate synthase, alpha subunit, C-terminal GJQ55_11835 IPR013785 Aldolase-type TIM barrel GJQ55_11835 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GJQ55_11835 IPR006982 Glutamate synthase, central-N GJQ55_11835 IPR002932 Glutamate synthase domain GJQ55_11835 IPR029055 Nucleophile aminohydrolases, N-terminal GJQ55_11835 IPR017932 Glutamine amidotransferase type 2 domain GJQ55_11845 IPR016037 3-dehydroquinate synthase AroB GJQ55_11845 IPR030963 3-dehydroquinate synthase family GJQ55_11845 IPR030960 3-dehydroquinate synthase domain GJQ55_11850 IPR023000 Shikimate kinase, conserved site GJQ55_11850 IPR000623 Shikimate kinase/Threonine synthase-like 1 GJQ55_11850 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_11850 IPR031322 Shikimate kinase/gluconokinase GJQ55_11855 IPR021731 AMIN domain GJQ55_11855 IPR001775 GspD/PilQ family GJQ55_11855 IPR005644 NolW-like GJQ55_11855 IPR038591 NolW-like superfamily GJQ55_11855 IPR013355 Type IV pilus secretin PilQ GJQ55_11855 IPR011662 Secretin/TonB, short N-terminal domain GJQ55_11855 IPR004846 Type II/III secretion system GJQ55_11855 IPR004845 Type II secretion system GspD, conserved site GJQ55_11860 IPR007446 Pilus assembly protein PilP GJQ55_11865 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 GJQ55_11865 IPR007445 Pilus assembly protein, PilO GJQ55_11870 IPR007813 Fimbrial assembly PilN GJQ55_11875 IPR005883 Type IV pilus assembly protein PilM GJQ55_11875 IPR003494 SHS2 domain inserted in FtsA GJQ55_11880 IPR012338 Beta-lactamase/transpeptidase-like GJQ55_11880 IPR001264 Glycosyl transferase, family 51 GJQ55_11880 IPR023346 Lysozyme-like domain superfamily GJQ55_11880 IPR036950 Penicillin binding protein transglycosylase domain GJQ55_11880 IPR031376 Penicillin-binding protein, OB-like domain GJQ55_11880 IPR001460 Penicillin-binding protein, transpeptidase GJQ55_11885 IPR016166 FAD-binding domain, PCMH-type GJQ55_11885 IPR036318 FAD-binding, type PCMH-like superfamily GJQ55_11885 IPR016164 FAD-linked oxidase-like, C-terminal GJQ55_11885 IPR004113 FAD-linked oxidase, C-terminal GJQ55_11885 IPR004490 Glycolate oxidase subunit GlcD GJQ55_11885 IPR006094 FAD linked oxidase, N-terminal GJQ55_11885 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 GJQ55_11890 IPR036291 NAD(P)-binding domain superfamily GJQ55_11890 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GJQ55_11890 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 GJQ55_11890 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GJQ55_11890 IPR002912 ACT domain GJQ55_11890 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site GJQ55_11895 IPR004651 Histidine biosynthesis, HisF GJQ55_11895 IPR013785 Aldolase-type TIM barrel GJQ55_11895 IPR006062 Histidine biosynthesis GJQ55_11895 IPR011060 Ribulose-phosphate binding barrel GJQ55_11900 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GJQ55_11900 IPR011060 Ribulose-phosphate binding barrel GJQ55_11900 IPR006062 Histidine biosynthesis GJQ55_11900 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GJQ55_11900 IPR013785 Aldolase-type TIM barrel GJQ55_11905 IPR010139 Imidazole glycerol phosphate synthase, subunit H GJQ55_11905 IPR029062 Class I glutamine amidotransferase-like GJQ55_11905 IPR017926 Glutamine amidotransferase GJQ55_11910 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily GJQ55_11910 IPR000807 Imidazoleglycerol-phosphate dehydratase GJQ55_11910 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GJQ55_11910 IPR020568 Ribosomal protein S5 domain 2-type fold GJQ55_11925 IPR029787 Nucleotide cyclase GJQ55_11925 IPR005330 MHYT domain GJQ55_11925 IPR001633 EAL domain GJQ55_11925 IPR000160 GGDEF domain GJQ55_11925 IPR035919 EAL domain superfamily GJQ55_11930 IPR005760 A/G-specific adenine glycosylase MutY GJQ55_11930 IPR011257 DNA glycosylase GJQ55_11930 IPR004036 Endonuclease III-like, conserved site-2 GJQ55_11930 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GJQ55_11930 IPR004035 Endonuclease III, iron-sulphur binding site GJQ55_11930 IPR015797 NUDIX hydrolase-like domain superfamily GJQ55_11930 IPR000445 Helix-hairpin-helix motif GJQ55_11930 IPR003265 HhH-GPD domain GJQ55_11930 IPR029119 MutY, C-terminal GJQ55_11930 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal GJQ55_11935 IPR036766 Fe(II) trafficking protein YggX superfamily GJQ55_11935 IPR007457 Fe(II) trafficking protein YggX GJQ55_11970 IPR002305 Aminoacyl-tRNA synthetase, class Ic GJQ55_11970 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold GJQ55_11970 IPR002942 RNA-binding S4 domain GJQ55_11970 IPR036986 RNA-binding S4 domain superfamily GJQ55_11970 IPR002307 Tyrosine-tRNA ligase GJQ55_11970 IPR024088 Tyrosine-tRNA ligase, bacterial-type GJQ55_11970 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GJQ55_11975 IPR016047 Peptidase M23 GJQ55_11975 IPR007340 Opacity-associated protein A GJQ55_11975 IPR011055 Duplicated hybrid motif GJQ55_11980 IPR005338 Anhydro-N-acetylmuramic acid kinase GJQ55_11985 IPR035903 HesB-like domain superfamily GJQ55_11985 IPR016092 FeS cluster insertion protein GJQ55_11985 IPR017870 FeS cluster insertion, C-terminal, conserved site GJQ55_11985 IPR023063 FeS cluster insertion protein ErpA GJQ55_11985 IPR000361 FeS cluster biogenesis GJQ55_12000 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GJQ55_12000 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GJQ55_12000 IPR036291 NAD(P)-binding domain superfamily GJQ55_12000 IPR000534 Semialdehyde dehydrogenase, NAD-binding GJQ55_12000 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GJQ55_12005 IPR014743 Chloride channel, core GJQ55_12005 IPR001807 Chloride channel, voltage gated GJQ55_12005 IPR023790 Chloride channel, voltage-gated, ClcB GJQ55_12010 IPR005265 Protoporphyrinogen oxidase HemJ-like GJQ55_12015 IPR005814 Aminotransferase class-III GJQ55_12015 IPR015424 Pyridoxal phosphate-dependent transferase GJQ55_12015 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GJQ55_12015 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GJQ55_12015 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GJQ55_12025 IPR004090 Chemotaxis methyl-accepting receptor GJQ55_12025 IPR003660 HAMP domain GJQ55_12025 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GJQ55_12035 IPR012338 Beta-lactamase/transpeptidase-like GJQ55_12035 IPR001264 Glycosyl transferase, family 51 GJQ55_12035 IPR023346 Lysozyme-like domain superfamily GJQ55_12035 IPR011813 Penicillin-binding protein 1B GJQ55_12035 IPR036950 Penicillin binding protein transglycosylase domain GJQ55_12035 IPR001460 Penicillin-binding protein, transpeptidase GJQ55_12035 IPR028166 Bifunctional transglycosylase second domain GJQ55_12040 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GJQ55_12045 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GJQ55_12045 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme GJQ55_12045 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GJQ55_12050 IPR001544 Aminotransferase class IV GJQ55_12050 IPR018300 Aminotransferase, class IV, conserved site GJQ55_12050 IPR036038 Aminotransferase-like, PLP-dependent enzymes GJQ55_12050 IPR005785 Branched-chain amino acid aminotransferase I GJQ55_12050 IPR033939 Branched-chain aminotransferase GJQ55_12055 IPR017932 Glutamine amidotransferase type 2 domain GJQ55_12055 IPR029055 Nucleophile aminohydrolases, N-terminal GJQ55_12055 IPR026869 Putative glutamine amidotransferase type 2 GJQ55_12075 IPR001952 Alkaline phosphatase GJQ55_12075 IPR018299 Alkaline phosphatase, active site GJQ55_12075 IPR017850 Alkaline-phosphatase-like, core domain superfamily GJQ55_12080 IPR000380 DNA topoisomerase, type IA GJQ55_12080 IPR023406 DNA topoisomerase, type IA, active site GJQ55_12080 IPR005738 DNA topoisomerase III GJQ55_12080 IPR006171 TOPRIM domain GJQ55_12080 IPR034144 DNA topoisomerase 3-like, TOPRIM domain GJQ55_12080 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GJQ55_12080 IPR023405 DNA topoisomerase, type IA, core domain GJQ55_12080 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 GJQ55_12080 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 GJQ55_12080 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 GJQ55_12080 IPR003601 DNA topoisomerase, type IA, domain 2 GJQ55_12080 IPR013497 DNA topoisomerase, type IA, central GJQ55_12085 IPR013589 Bacterial transglutaminase-like, N-terminal GJQ55_12085 IPR038765 Papain-like cysteine peptidase superfamily GJQ55_12085 IPR002931 Transglutaminase-like GJQ55_12095 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_12095 IPR041628 ChlI/MoxR, AAA lid domain GJQ55_12095 IPR011703 ATPase, AAA-3 GJQ55_12100 IPR036390 Winged helix DNA-binding domain superfamily GJQ55_12100 IPR036388 Winged helix-like DNA-binding domain superfamily GJQ55_12100 IPR001845 HTH ArsR-type DNA-binding domain GJQ55_12100 IPR018334 ArsR-type transcription regulator, HTH motif GJQ55_12100 IPR011991 ArsR-like helix-turn-helix domain GJQ55_12105 IPR002133 S-adenosylmethionine synthetase GJQ55_12105 IPR022636 S-adenosylmethionine synthetase superfamily GJQ55_12105 IPR022630 S-adenosylmethionine synthetase, C-terminal GJQ55_12105 IPR022631 S-adenosylmethionine synthetase, conserved site GJQ55_12105 IPR022629 S-adenosylmethionine synthetase, central domain GJQ55_12105 IPR022628 S-adenosylmethionine synthetase, N-terminal GJQ55_12115 IPR042172 Adenosylhomocysteinase-like superfamily GJQ55_12115 IPR000043 Adenosylhomocysteinase-like GJQ55_12115 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain GJQ55_12115 IPR036291 NAD(P)-binding domain superfamily GJQ55_12115 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GJQ55_12120 IPR003171 Methylenetetrahydrofolate reductase GJQ55_12120 IPR004621 Eukaryotic-type methylenetetrahydrofolate reductase GJQ55_12120 IPR029041 FAD-linked oxidoreductase-like GJQ55_12120 IPR004620 5,10-methylenetetrahydrofolate reductase GJQ55_12130 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GJQ55_12130 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase GJQ55_12130 IPR005835 Nucleotidyl transferase domain GJQ55_12130 IPR029044 Nucleotide-diphospho-sugar transferases GJQ55_12130 IPR014710 RmlC-like jelly roll fold GJQ55_12130 IPR011051 RmlC-like cupin domain superfamily GJQ55_12135 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GJQ55_12135 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GJQ55_12135 IPR016066 Alpha-D-phosphohexomutase, conserved site GJQ55_12135 IPR005841 Alpha-D-phosphohexomutase superfamily GJQ55_12135 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GJQ55_12135 IPR005843 Alpha-D-phosphohexomutase, C-terminal GJQ55_12135 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GJQ55_12135 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GJQ55_12145 IPR001173 Glycosyltransferase 2-like GJQ55_12145 IPR029044 Nucleotide-diphospho-sugar transferases GJQ55_12150 IPR001296 Glycosyl transferase, family 1 GJQ55_12155 IPR007016 O-antigen ligase-related GJQ55_12165 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type GJQ55_12165 IPR035909 Methylesterase CheB, C-terminal GJQ55_12165 IPR011006 CheY-like superfamily GJQ55_12165 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GJQ55_12165 IPR001789 Signal transduction response regulator, receiver domain GJQ55_12170 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GJQ55_12170 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GJQ55_12170 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GJQ55_12170 IPR036641 HPT domain superfamily GJQ55_12170 IPR005467 Histidine kinase domain GJQ55_12170 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GJQ55_12170 IPR003594 Histidine kinase/HSP90-like ATPase GJQ55_12170 IPR004105 Histidine kinase CheA-like, homodimeric domain GJQ55_12170 IPR001789 Signal transduction response regulator, receiver domain GJQ55_12170 IPR002545 CheW-like domain GJQ55_12170 IPR036061 CheW-like domain superfamily GJQ55_12170 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GJQ55_12170 IPR011006 CheY-like superfamily GJQ55_12175 IPR026024 Chemotaxis protein methyltransferase CheR GJQ55_12175 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal GJQ55_12175 IPR000780 MCP methyltransferase, CheR-type GJQ55_12175 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal GJQ55_12175 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily GJQ55_12175 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase GJQ55_12180 IPR004090 Chemotaxis methyl-accepting receptor GJQ55_12180 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GJQ55_12180 IPR003660 HAMP domain GJQ55_12180 IPR029095 NarX-like, N-terminal GJQ55_12185 IPR039315 Chemotaxis protein CheW GJQ55_12185 IPR036061 CheW-like domain superfamily GJQ55_12185 IPR002545 CheW-like domain GJQ55_12190 IPR011006 CheY-like superfamily GJQ55_12190 IPR001789 Signal transduction response regulator, receiver domain GJQ55_12195 IPR011006 CheY-like superfamily GJQ55_12195 IPR001789 Signal transduction response regulator, receiver domain GJQ55_12200 IPR016185 Pre-ATP-grasp domain superfamily GJQ55_12200 IPR004215 Prokaryotic glutathione synthetase, N-terminal GJQ55_12200 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GJQ55_12200 IPR011761 ATP-grasp fold GJQ55_12200 IPR013815 ATP-grasp fold, subdomain 1 GJQ55_12200 IPR006284 Glutathione synthetase, prokaryotic GJQ55_12210 IPR003774 Protein of unknown function UPF0301 GJQ55_12215 IPR037027 YqgF/RNase H-like domain superfamily GJQ55_12215 IPR012337 Ribonuclease H-like superfamily GJQ55_12215 IPR005227 Putative pre-16S rRNA nuclease GJQ55_12215 IPR006641 YqgF/RNase H-like domain GJQ55_12220 IPR023050 Bifunctional protein PyrR GJQ55_12220 IPR029057 Phosphoribosyltransferase-like GJQ55_12220 IPR000836 Phosphoribosyltransferase domain GJQ55_12225 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GJQ55_12225 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GJQ55_12225 IPR006130 Aspartate/ornithine carbamoyltransferase GJQ55_12225 IPR002082 Aspartate carbamoyltransferase GJQ55_12225 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GJQ55_12230 IPR006680 Amidohydrolase-related GJQ55_12230 IPR004722 Dihydroorotase GJQ55_12230 IPR011059 Metal-dependent hydrolase, composite domain superfamily GJQ55_12230 IPR032466 Metal-dependent hydrolase GJQ55_12235 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal GJQ55_12235 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily GJQ55_12235 IPR039901 3-deoxy-D-manno-octulosonic acid transferase GJQ55_12240 IPR029056 Ribokinase-like GJQ55_12240 IPR011914 RfaE bifunctional protein, domain II GJQ55_12240 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold GJQ55_12240 IPR011611 Carbohydrate kinase PfkB GJQ55_12240 IPR004821 Cytidyltransferase-like domain GJQ55_12240 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GJQ55_12240 IPR023030 Bifunctional protein HldE GJQ55_12240 IPR011913 RfaE bifunctional protein, domain I GJQ55_12245 IPR004960 Bacterial lipid A biosynthesis acyltransferase GJQ55_12245 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GJQ55_12255 IPR007831 General secretory system II, protein E, N-terminal GJQ55_12255 IPR037257 General secretory system II, protein E, N-terminal superfamily GJQ55_12255 IPR042181 Type II secretion system, protein E, N-terminal GJQ55_12255 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_12255 IPR013374 ATPase, type IV, pilus assembly, PilB GJQ55_12255 IPR001482 Type II/IV secretion system protein GJQ55_12255 IPR003593 AAA+ ATPase domain GJQ55_12265 IPR010169 Acetylornithine deacetylase ArgE GJQ55_12265 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GJQ55_12265 IPR036264 Bacterial exopeptidase dimerisation domain GJQ55_12265 IPR002933 Peptidase M20 GJQ55_12265 IPR011650 Peptidase M20, dimerisation domain GJQ55_12270 IPR036393 Acetylglutamate kinase-like superfamily GJQ55_12270 IPR016181 Acyl-CoA N-acyltransferase GJQ55_12270 IPR001048 Aspartate/glutamate/uridylate kinase GJQ55_12270 IPR000182 GNAT domain GJQ55_12270 IPR010167 Amino-acid N-acetyltransferase GJQ55_12270 IPR033719 N-acetylglutamate synthase, kinase-like domain GJQ55_12290 IPR001796 Dihydrofolate reductase domain GJQ55_12290 IPR012259 Dihydrofolate reductase GJQ55_12290 IPR024072 Dihydrofolate reductase-like domain superfamily GJQ55_12290 IPR017925 Dihydrofolate reductase conserved site GJQ55_12295 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain GJQ55_12295 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily GJQ55_12295 IPR000398 Thymidylate synthase GJQ55_12295 IPR020940 Thymidylate synthase, active site GJQ55_12300 IPR001640 Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase Lgt GJQ55_12305 IPR002781 Transmembrane protein TauE-like GJQ55_12315 IPR005490 L,D-transpeptidase catalytic domain GJQ55_12315 IPR038063 L,D-transpeptidase catalytic domain-like GJQ55_12320 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily GJQ55_12320 IPR006311 Twin-arginine translocation pathway, signal sequence GJQ55_12320 IPR010275 Protein of unknown function DUF882 GJQ55_12325 IPR008731 Phosphotransferase system, enzyme I N-terminal GJQ55_12325 IPR040442 Pyruvate kinase-like domain superfamily GJQ55_12325 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GJQ55_12325 IPR036618 PtsI, HPr-binding domain superfamily GJQ55_12325 IPR006318 Phosphotransferase system, enzyme I-like GJQ55_12325 IPR023151 PEP-utilising enzyme, conserved site GJQ55_12325 IPR000121 PEP-utilising enzyme, C-terminal GJQ55_12325 IPR018274 PEP-utilising enzyme, active site GJQ55_12325 IPR008279 PEP-utilising enzyme, mobile domain GJQ55_12325 IPR029016 GAF-like domain superfamily GJQ55_12325 IPR036637 Phosphohistidine domain superfamily GJQ55_12325 IPR003018 GAF domain GJQ55_12330 IPR020476 NUDIX hydrolase GJQ55_12330 IPR015797 NUDIX hydrolase-like domain superfamily GJQ55_12330 IPR020084 NUDIX hydrolase, conserved site GJQ55_12330 IPR000086 NUDIX hydrolase domain GJQ55_12330 IPR022927 RNA pyrophosphohydrolase RppH GJQ55_12335 IPR036412 HAD-like superfamily GJQ55_12335 IPR023214 HAD superfamily GJQ55_12335 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like GJQ55_12345 IPR015947 PUA-like superfamily GJQ55_12345 IPR036974 PUA domain superfamily GJQ55_12345 IPR041532 RlmI, PUA-like domain GJQ55_12345 IPR023542 rRNA large subunit methyltransferase I GJQ55_12345 IPR019614 S-adenosylmethionine-dependent methyltransferase GJQ55_12345 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase GJQ55_12345 IPR002478 PUA domain GJQ55_12355 IPR018389 TRAP transporter solute receptor DctP/TeaA GJQ55_12355 IPR038404 TRAP transporter solute receptor DctP superfamily GJQ55_12355 IPR026289 Solute binding protein, TakP-like GJQ55_12355 IPR041722 Alpha-keto acid binding periplasmic protein GJQ55_12360 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_12360 IPR034739 UvrD/AddA helicase, N-terminal GJQ55_12360 IPR014016 UvrD-like helicase, ATP-binding domain GJQ55_12360 IPR005753 DNA helicase, ATP-dependent, UvrD type GJQ55_12360 IPR014017 UvrD-like DNA helicase, C-terminal GJQ55_12360 IPR000212 DNA helicase, UvrD/REP type GJQ55_12360 IPR013986 DExx box DNA helicase domain superfamily GJQ55_12365 IPR000281 Helix-turn-helix protein RpiR GJQ55_12365 IPR035472 RpiR-like, SIS domain GJQ55_12365 IPR001347 Sugar isomerase (SIS) GJQ55_12365 IPR036388 Winged helix-like DNA-binding domain superfamily GJQ55_12365 IPR009057 Homeobox-like domain superfamily GJQ55_12375 IPR024041 Ammonium transporter AmtB-like domain GJQ55_12375 IPR018047 Ammonium transporter, conserved site GJQ55_12375 IPR001905 Ammonium transporter GJQ55_12375 IPR029020 Ammonium/urea transporter GJQ55_12380 IPR017918 Nitrogen regulatory protein PII, conserved site GJQ55_12380 IPR002187 Nitrogen regulatory protein PII GJQ55_12380 IPR011322 Nitrogen regulatory PII-like, alpha/beta GJQ55_12380 IPR002332 Nitrogen regulatory protein P-II, urydylation site GJQ55_12380 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal GJQ55_12390 IPR007475 Ubiquinone biosynthesis accessory factor UbiK GJQ55_12400 IPR000160 GGDEF domain GJQ55_12400 IPR035919 EAL domain superfamily GJQ55_12400 IPR001633 EAL domain GJQ55_12400 IPR029787 Nucleotide cyclase GJQ55_12400 IPR005330 MHYT domain GJQ55_12410 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GJQ55_12410 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GJQ55_12410 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GJQ55_12410 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GJQ55_12410 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GJQ55_12410 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GJQ55_12410 IPR006089 Acyl-CoA dehydrogenase, conserved site GJQ55_12415 IPR036291 NAD(P)-binding domain superfamily GJQ55_12415 IPR002347 Short-chain dehydrogenase/reductase SDR GJQ55_12415 IPR020904 Short-chain dehydrogenase/reductase, conserved site GJQ55_12415 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GJQ55_12430 IPR002347 Short-chain dehydrogenase/reductase SDR GJQ55_12430 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GJQ55_12430 IPR020904 Short-chain dehydrogenase/reductase, conserved site GJQ55_12430 IPR036291 NAD(P)-binding domain superfamily GJQ55_12435 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GJQ55_12435 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GJQ55_12435 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GJQ55_12435 IPR014362 Glutamate dehydrogenase GJQ55_12435 IPR036291 NAD(P)-binding domain superfamily GJQ55_12435 IPR033922 NAD(P) binding domain of glutamate dehydrogenase GJQ55_12435 IPR033524 Leu/Phe/Val dehydrogenases active site GJQ55_12440 IPR003423 Outer membrane efflux protein GJQ55_12440 IPR010130 Type I secretion outer membrane protein, TolC GJQ55_12445 IPR020084 NUDIX hydrolase, conserved site GJQ55_12445 IPR000086 NUDIX hydrolase domain GJQ55_12445 IPR015797 NUDIX hydrolase-like domain superfamily GJQ55_12445 IPR004385 Nucleoside diphosphate pyrophosphatase GJQ55_12455 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GJQ55_12455 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GJQ55_12455 IPR029052 Metallo-dependent phosphatase-like GJQ55_12460 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA GJQ55_12460 IPR029058 Alpha/Beta hydrolase fold GJQ55_12465 IPR003594 Histidine kinase/HSP90-like ATPase GJQ55_12465 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GJQ55_12465 IPR001241 DNA topoisomerase, type IIA GJQ55_12465 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GJQ55_12465 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GJQ55_12465 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GJQ55_12465 IPR018522 DNA topoisomerase, type IIA, conserved site GJQ55_12465 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GJQ55_12465 IPR006171 TOPRIM domain GJQ55_12465 IPR002288 DNA gyrase B subunit, C-terminal GJQ55_12465 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup GJQ55_12465 IPR020568 Ribosomal protein S5 domain 2-type fold GJQ55_12470 IPR005330 MHYT domain GJQ55_12470 IPR035919 EAL domain superfamily GJQ55_12470 IPR001633 EAL domain GJQ55_12470 IPR000160 GGDEF domain GJQ55_12470 IPR029787 Nucleotide cyclase GJQ55_12475 IPR012093 Pirin GJQ55_12475 IPR008778 Pirin, C-terminal domain GJQ55_12475 IPR003829 Pirin, N-terminal domain GJQ55_12475 IPR014710 RmlC-like jelly roll fold GJQ55_12475 IPR011051 RmlC-like cupin domain superfamily GJQ55_12480 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GJQ55_12480 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal GJQ55_12480 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GJQ55_12480 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GJQ55_12480 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GJQ55_12480 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GJQ55_12480 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GJQ55_12485 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase GJQ55_12485 IPR030374 Polyamine biosynthesis domain GJQ55_12485 IPR035246 Spermidine synthase, tetramerisation domain GJQ55_12485 IPR037163 Spermidine synthase, tetramerisation domain superfamily GJQ55_12485 IPR001045 Spermidine/spermine synthases GJQ55_12485 IPR030373 Polyamine biosynthesis domain, conserved site GJQ55_12490 IPR024685 Adenylate cyclase class-I, N-terminal domain GJQ55_12490 IPR024686 Adenylate cyclase class-I, conserved site GJQ55_12490 IPR000274 Adenylate cyclase, class-I GJQ55_12500 IPR029066 PLP-binding barrel GJQ55_12500 IPR000183 Ornithine/DAP/Arg decarboxylase GJQ55_12500 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site GJQ55_12500 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GJQ55_12500 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GJQ55_12500 IPR002986 Diaminopimelate decarboxylase, LysA GJQ55_12500 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GJQ55_12505 IPR018510 Diaminopimelate epimerase, active site GJQ55_12505 IPR001653 Diaminopimelate epimerase, DapF GJQ55_12515 IPR006439 HAD hydrolase, subfamily IA GJQ55_12515 IPR036412 HAD-like superfamily GJQ55_12515 IPR041492 Haloacid dehalogenase-like hydrolase GJQ55_12515 IPR023214 HAD superfamily GJQ55_12525 IPR002323 Cytochrome c, class IE GJQ55_12525 IPR009056 Cytochrome c-like domain GJQ55_12525 IPR036909 Cytochrome c-like domain superfamily GJQ55_12530 IPR023346 Lysozyme-like domain superfamily GJQ55_12530 IPR023664 Murein transglycosylase-C GJQ55_12530 IPR024570 Murein transglycosylase-C, N-terminal GJQ55_12530 IPR000189 Prokaryotic transglycosylase, active site GJQ55_12530 IPR008258 Transglycosylase SLT domain 1 GJQ55_12535 IPR014014 RNA helicase, DEAD-box type, Q motif GJQ55_12535 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site GJQ55_12535 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_12535 IPR001650 Helicase, C-terminal GJQ55_12535 IPR014001 Helicase superfamily 1/2, ATP-binding domain GJQ55_12535 IPR028622 ATP-dependent RNA helicase RhlE GJQ55_12535 IPR011545 DEAD/DEAH box helicase domain GJQ55_12540 IPR025985 YnbE-like lipoprotein GJQ55_12550 IPR007156 LemA GJQ55_12550 IPR023353 LemA-like domain superfamily GJQ55_12555 IPR001915 Peptidase M48 GJQ55_12555 IPR022919 Peptidase M48, protease HtpX, putative GJQ55_12560 IPR000943 RNA polymerase sigma-70 GJQ55_12560 IPR014284 RNA polymerase sigma-70 like domain GJQ55_12560 IPR007630 RNA polymerase sigma-70 region 4 GJQ55_12560 IPR013325 RNA polymerase sigma factor, region 2 GJQ55_12560 IPR013324 RNA polymerase sigma factor, region 3/4-like GJQ55_12560 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GJQ55_12560 IPR009042 RNA polymerase sigma-70 region 1.2 GJQ55_12560 IPR007627 RNA polymerase sigma-70 region 2 GJQ55_12565 IPR004513 Cell division protein FtsX GJQ55_12565 IPR040690 FtsX, extracellular domain GJQ55_12570 IPR003593 AAA+ ATPase domain GJQ55_12570 IPR003439 ABC transporter-like GJQ55_12570 IPR017871 ABC transporter, conserved site GJQ55_12570 IPR005286 Cell division protein FtsE, ATP-binding GJQ55_12570 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_12575 IPR003593 AAA+ ATPase domain GJQ55_12575 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_12575 IPR013822 Signal recognition particle SRP54, helical bundle GJQ55_12575 IPR004390 Signal-recognition particle receptor FtsY GJQ55_12575 IPR036225 SRP/SRP receptor, N-terminal GJQ55_12575 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily GJQ55_12575 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GJQ55_12585 IPR004398 RNA methyltransferase, RsmD GJQ55_12585 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase GJQ55_12585 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GJQ55_12595 IPR003012 Tetracycline transcriptional regulator, TetR GJQ55_12595 IPR004111 Tetracycline repressor TetR, C-terminal GJQ55_12595 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily GJQ55_12595 IPR009057 Homeobox-like domain superfamily GJQ55_12595 IPR023772 DNA-binding HTH domain, TetR-type, conserved site GJQ55_12595 IPR001647 DNA-binding HTH domain, TetR-type GJQ55_12600 IPR016161 Aldehyde/histidinol dehydrogenase GJQ55_12600 IPR016163 Aldehyde dehydrogenase, C-terminal GJQ55_12600 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GJQ55_12600 IPR016162 Aldehyde dehydrogenase, N-terminal GJQ55_12600 IPR015590 Aldehyde dehydrogenase domain GJQ55_12600 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GJQ55_12610 IPR036188 FAD/NAD(P)-binding domain superfamily GJQ55_12610 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GJQ55_12610 IPR012132 Glucose-methanol-choline oxidoreductase GJQ55_12610 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GJQ55_12615 IPR001980 Phosphopantetheine adenylyltransferase GJQ55_12615 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold GJQ55_12615 IPR004821 Cytidyltransferase-like domain GJQ55_12620 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site GJQ55_12620 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain GJQ55_12625 IPR029055 Nucleophile aminohydrolases, N-terminal GJQ55_12625 IPR000101 Gamma-glutamyltranspeptidase GJQ55_12630 IPR003848 Domain of unknown function DUF218 GJQ55_12640 IPR020629 Formamidopyrimidine-DNA glycosylase GJQ55_12640 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GJQ55_12640 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GJQ55_12640 IPR010979 Ribosomal protein S13-like, H2TH GJQ55_12640 IPR000214 Zinc finger, DNA glycosylase/AP lyase-type GJQ55_12640 IPR010663 Zinc finger, FPG/IleRS-type GJQ55_12640 IPR035937 MutM-like, N-terminal GJQ55_12640 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GJQ55_12645 IPR038584 Ribosomal protein L33 superfamily GJQ55_12645 IPR018264 Ribosomal protein L33, conserved site GJQ55_12645 IPR011332 Zinc-binding ribosomal protein GJQ55_12645 IPR001705 Ribosomal protein L33 GJQ55_12650 IPR034704 L28p-like GJQ55_12650 IPR037147 Ribosomal protein L28/L24 superfamily GJQ55_12650 IPR001383 Ribosomal protein L28 GJQ55_12650 IPR026569 Ribosomal protein L28/L24 GJQ55_12655 IPR001405 Uncharacterised protein family UPF0758 GJQ55_12655 IPR037518 MPN domain GJQ55_12655 IPR020891 Uncharacterised protein family UPF0758, conserved site GJQ55_12655 IPR010994 RuvA domain 2-like GJQ55_12655 IPR025657 RadC-like JAB domain GJQ55_12660 IPR035929 CoaB-like superfamily GJQ55_12660 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal GJQ55_12660 IPR036551 Flavin prenyltransferase-like GJQ55_12660 IPR003382 Flavoprotein GJQ55_12660 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GJQ55_12665 IPR033704 dUTPase, trimeric GJQ55_12665 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GJQ55_12665 IPR036157 dUTPase-like superfamily GJQ55_12665 IPR029054 dUTPase-like GJQ55_12670 IPR016066 Alpha-D-phosphohexomutase, conserved site GJQ55_12670 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GJQ55_12670 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GJQ55_12670 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GJQ55_12670 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GJQ55_12670 IPR005841 Alpha-D-phosphohexomutase superfamily GJQ55_12670 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GJQ55_12670 IPR005843 Alpha-D-phosphohexomutase, C-terminal GJQ55_12675 IPR041727 N-Acetyl-L-glutamate kinase, cyclic GJQ55_12675 IPR001057 Glutamate/acetylglutamate kinase GJQ55_12675 IPR001048 Aspartate/glutamate/uridylate kinase GJQ55_12675 IPR037528 Acetylglutamate kinase ArgB GJQ55_12675 IPR004662 Acetylglutamate kinase family GJQ55_12675 IPR036393 Acetylglutamate kinase-like superfamily GJQ55_12680 IPR023769 Nucleoid occlusion factor SlmA GJQ55_12680 IPR001647 DNA-binding HTH domain, TetR-type GJQ55_12680 IPR009057 Homeobox-like domain superfamily GJQ55_12680 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily GJQ55_12690 IPR023031 Orotate phosphoribosyltransferase GJQ55_12690 IPR004467 Orotate phosphoribosyl transferase domain GJQ55_12690 IPR000836 Phosphoribosyltransferase domain GJQ55_12690 IPR029057 Phosphoribosyltransferase-like GJQ55_12700 IPR015847 Exoribonuclease, phosphorolytic domain 2 GJQ55_12700 IPR036345 Exoribonuclease, PH domain 2 superfamily GJQ55_12700 IPR027408 PNPase/RNase PH domain superfamily GJQ55_12700 IPR020568 Ribosomal protein S5 domain 2-type fold GJQ55_12700 IPR002381 Ribonuclease PH, bacterial-type GJQ55_12700 IPR018336 Ribonuclease PH, conserved site GJQ55_12700 IPR001247 Exoribonuclease, phosphorolytic domain 1 GJQ55_12705 IPR005229 Conserved hypothetical protein CHP00255 GJQ55_12705 IPR013551 Domain of unknown function DUF1732 GJQ55_12705 IPR013527 YicC-like, N-terminal GJQ55_12710 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_12710 IPR008145 Guanylate kinase/L-type calcium channel beta subunit GJQ55_12710 IPR017665 Guanylate kinase GJQ55_12710 IPR020590 Guanylate kinase, conserved site GJQ55_12710 IPR008144 Guanylate kinase-like domain GJQ55_12715 IPR003716 DNA-directed RNA polymerase, omega subunit GJQ55_12715 IPR006110 RNA polymerase, subunit omega/K/RPB6 GJQ55_12715 IPR012293 RNA polymerase subunit, RPB6/omega GJQ55_12715 IPR036161 RPB6/omega subunit-like superfamily GJQ55_12720 IPR002912 ACT domain GJQ55_12720 IPR003607 HD/PDEase domain GJQ55_12720 IPR004811 RelA/SpoT family GJQ55_12720 IPR007685 RelA/SpoT GJQ55_12720 IPR004095 TGS GJQ55_12720 IPR012676 TGS-like GJQ55_12720 IPR033655 RelA, TGS domain GJQ55_12720 IPR012675 Beta-grasp domain superfamily GJQ55_12725 IPR006056 RidA family GJQ55_12725 IPR019897 RidA, conserved site GJQ55_12725 IPR035959 RutC-like superfamily GJQ55_12725 IPR006175 YjgF/YER057c/UK114 family GJQ55_12735 IPR005119 LysR, substrate-binding GJQ55_12735 IPR000847 Transcription regulator HTH, LysR GJQ55_12735 IPR036390 Winged helix DNA-binding domain superfamily GJQ55_12735 IPR036388 Winged helix-like DNA-binding domain superfamily GJQ55_12740 IPR004609 ATP-dependent DNA helicase RecG GJQ55_12740 IPR001650 Helicase, C-terminal GJQ55_12740 IPR012340 Nucleic acid-binding, OB-fold GJQ55_12740 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_12740 IPR033454 RecG, wedge domain GJQ55_12740 IPR011545 DEAD/DEAH box helicase domain GJQ55_12740 IPR014001 Helicase superfamily 1/2, ATP-binding domain GJQ55_12755 IPR022919 Peptidase M48, protease HtpX, putative GJQ55_12755 IPR001915 Peptidase M48 GJQ55_12760 IPR030148 Catecholate siderophore receptor Fiu GJQ55_12760 IPR012910 TonB-dependent receptor, plug domain GJQ55_12760 IPR039423 TonB-dependent receptor-like GJQ55_12760 IPR000531 TonB-dependent receptor-like, beta-barrel GJQ55_12760 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily GJQ55_12760 IPR010105 TonB-dependent siderophore receptor GJQ55_12760 IPR037066 TonB-dependent receptor, plug domain superfamily GJQ55_12780 IPR002575 Aminoglycoside phosphotransferase GJQ55_12780 IPR005280 Homoserine kinase, type II GJQ55_12780 IPR011009 Protein kinase-like domain superfamily GJQ55_12790 IPR002298 DNA polymerase A GJQ55_12790 IPR036397 Ribonuclease H superfamily GJQ55_12790 IPR012337 Ribonuclease H-like superfamily GJQ55_12790 IPR029060 PIN-like domain superfamily GJQ55_12790 IPR008918 Helix-hairpin-helix motif, class 2 GJQ55_12790 IPR018320 DNA polymerase 1 GJQ55_12790 IPR020045 DNA polymerase I-like, H3TH domain GJQ55_12790 IPR001098 DNA-directed DNA polymerase, family A, palm domain GJQ55_12790 IPR019760 DNA-directed DNA polymerase, family A, conserved site GJQ55_12790 IPR036279 5'-3' exonuclease, C-terminal domain superfamily GJQ55_12790 IPR002421 5'-3' exonuclease, N-terminal GJQ55_12790 IPR002562 3'-5' exonuclease domain GJQ55_12790 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GJQ55_12800 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GJQ55_12800 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GJQ55_12800 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GJQ55_12800 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GJQ55_12800 IPR006089 Acyl-CoA dehydrogenase, conserved site GJQ55_12800 IPR041504 Adaptive response protein AidB, N-terminal GJQ55_12800 IPR034184 Putative acyl-CoA dehydrogenase AidB GJQ55_12805 IPR004680 Citrate transporter-like domain GJQ55_12805 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GJQ55_12805 IPR006037 Regulator of K+ conductance, C-terminal GJQ55_12805 IPR031312 Sodium/sulphate symporter, conserved site GJQ55_12815 IPR031312 Sodium/sulphate symporter, conserved site GJQ55_12815 IPR004680 Citrate transporter-like domain GJQ55_12815 IPR006037 Regulator of K+ conductance, C-terminal GJQ55_12815 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GJQ55_12825 IPR015797 NUDIX hydrolase-like domain superfamily GJQ55_12825 IPR020084 NUDIX hydrolase, conserved site GJQ55_12825 IPR000086 NUDIX hydrolase domain GJQ55_12830 IPR006439 HAD hydrolase, subfamily IA GJQ55_12830 IPR023214 HAD superfamily GJQ55_12830 IPR036412 HAD-like superfamily GJQ55_12830 IPR041492 Haloacid dehalogenase-like hydrolase GJQ55_12835 IPR025708 Heat shock protein 15 GJQ55_12835 IPR002942 RNA-binding S4 domain GJQ55_12835 IPR036986 RNA-binding S4 domain superfamily GJQ55_12840 IPR000397 Heat shock protein Hsp33 GJQ55_12840 IPR016154 Heat shock protein Hsp33, C-terminal GJQ55_12840 IPR016153 Heat shock protein Hsp33, N-terminal GJQ55_12840 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily GJQ55_12845 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GJQ55_12845 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GJQ55_12845 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GJQ55_12915 IPR041692 HHH domain 9 GJQ55_12915 IPR010994 RuvA domain 2-like GJQ55_12915 IPR022967 RNA-binding domain, S1 GJQ55_12915 IPR003029 S1 domain GJQ55_12915 IPR023323 Tex-like domain superfamily GJQ55_12915 IPR023319 Tex-like protein, HTH domain superfamily GJQ55_12915 IPR018974 Tex-like protein, N-terminal GJQ55_12915 IPR032639 Tex protein, YqgF-like domain GJQ55_12915 IPR006641 YqgF/RNase H-like domain GJQ55_12915 IPR037027 YqgF/RNase H-like domain superfamily GJQ55_12915 IPR012337 Ribonuclease H-like superfamily GJQ55_12915 IPR012340 Nucleic acid-binding, OB-fold GJQ55_12925 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GJQ55_12925 IPR007370 Glutamate--cysteine ligase GJQ55_12925 IPR006334 Glutamate--cysteine ligase, monofunctional GJQ55_12935 IPR023380 DsbB-like superfamily GJQ55_12935 IPR022920 Disulphide bond formation protein DsbB GJQ55_12935 IPR003752 Disulphide bond formation protein DsbB/BdbC GJQ55_12940 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GJQ55_12940 IPR038309 Rsd/AlgQ superfamily GJQ55_12970 IPR017871 ABC transporter, conserved site GJQ55_12970 IPR032781 ABC-transporter extension domain GJQ55_12970 IPR003593 AAA+ ATPase domain GJQ55_12970 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_12970 IPR003439 ABC transporter-like GJQ55_12980 IPR016169 FAD-binding, type PCMH, subdomain 2 GJQ55_12980 IPR036318 FAD-binding, type PCMH-like superfamily GJQ55_12980 IPR005170 Transporter-associated domain GJQ55_12980 IPR002550 CNNM, transmembrane domain GJQ55_12980 IPR000644 CBS domain GJQ55_12985 IPR003593 AAA+ ATPase domain GJQ55_12985 IPR011527 ABC transporter type 1, transmembrane domain GJQ55_12985 IPR036640 ABC transporter type 1, transmembrane domain superfamily GJQ55_12985 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC GJQ55_12985 IPR003439 ABC transporter-like GJQ55_12985 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_12985 IPR017871 ABC transporter, conserved site GJQ55_12990 IPR036640 ABC transporter type 1, transmembrane domain superfamily GJQ55_12990 IPR039421 Type I protein exporter GJQ55_12990 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_12990 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD GJQ55_12990 IPR017871 ABC transporter, conserved site GJQ55_12990 IPR003593 AAA+ ATPase domain GJQ55_12990 IPR011527 ABC transporter type 1, transmembrane domain GJQ55_12990 IPR003439 ABC transporter-like GJQ55_13010 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GJQ55_13010 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase GJQ55_13015 IPR006696 Protein of unknown function DUF423 GJQ55_13020 IPR023677 UbiD decarboxylyase, bacteria GJQ55_13020 IPR002830 UbiD decarboxylyase family GJQ55_13025 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain GJQ55_13025 IPR017927 FAD-binding domain, ferredoxin reductase-type GJQ55_13025 IPR017938 Riboflavin synthase-like beta-barrel GJQ55_13025 IPR001433 Oxidoreductase FAD/NAD(P)-binding GJQ55_13030 IPR010920 LSM domain superfamily GJQ55_13030 IPR008910 Conserved TM helix GJQ55_13030 IPR023408 Mechanosensitive ion channel MscS domain superfamily GJQ55_13030 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GJQ55_13030 IPR006686 Mechanosensitive ion channel MscS, conserved site GJQ55_13030 IPR006685 Mechanosensitive ion channel MscS GJQ55_13030 IPR011066 Mechanosensitive ion channel MscS, C-terminal GJQ55_13035 IPR028082 Periplasmic binding protein-like I GJQ55_13035 IPR000709 Leu/Ile/Val-binding protein GJQ55_13035 IPR028081 Leucine-binding protein domain GJQ55_13045 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX GJQ55_13050 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GJQ55_13050 IPR039793 Uroporphyrinogen-III synthase GJQ55_13050 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GJQ55_13055 IPR000860 Porphobilinogen deaminase GJQ55_13055 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GJQ55_13055 IPR022417 Porphobilinogen deaminase, N-terminal GJQ55_13055 IPR022418 Porphobilinogen deaminase, C-terminal GJQ55_13055 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GJQ55_13060 IPR011006 CheY-like superfamily GJQ55_13060 IPR001789 Signal transduction response regulator, receiver domain GJQ55_13060 IPR007492 LytTR DNA-binding domain GJQ55_13065 IPR029016 GAF-like domain superfamily GJQ55_13065 IPR003594 Histidine kinase/HSP90-like ATPase GJQ55_13065 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GJQ55_13065 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GJQ55_13065 IPR010559 Signal transduction histidine kinase, internal region GJQ55_13070 IPR022761 Fumarate lyase, N-terminal GJQ55_13070 IPR008948 L-Aspartase-like GJQ55_13070 IPR000362 Fumarate lyase family GJQ55_13070 IPR020557 Fumarate lyase, conserved site GJQ55_13070 IPR009049 Argininosuccinate lyase GJQ55_13070 IPR029419 Argininosuccinate lyase, C-terminal GJQ55_13080 IPR005330 MHYT domain GJQ55_13080 IPR000160 GGDEF domain GJQ55_13080 IPR035919 EAL domain superfamily GJQ55_13080 IPR001633 EAL domain GJQ55_13080 IPR029787 Nucleotide cyclase GJQ55_13080 IPR035965 PAS domain superfamily GJQ55_13090 IPR036390 Winged helix DNA-binding domain superfamily GJQ55_13090 IPR005119 LysR, substrate-binding GJQ55_13090 IPR036388 Winged helix-like DNA-binding domain superfamily GJQ55_13090 IPR000847 Transcription regulator HTH, LysR GJQ55_13095 IPR029787 Nucleotide cyclase GJQ55_13095 IPR005330 MHYT domain GJQ55_13095 IPR000160 GGDEF domain GJQ55_13095 IPR035919 EAL domain superfamily GJQ55_13095 IPR001633 EAL domain GJQ55_13105 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily GJQ55_13105 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GJQ55_13105 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain GJQ55_13105 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal GJQ55_13105 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GJQ55_13110 IPR003593 AAA+ ATPase domain GJQ55_13110 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GJQ55_13110 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GJQ55_13110 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GJQ55_13110 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal GJQ55_13110 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_13110 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GJQ55_13110 IPR005722 ATP synthase, F1 complex, beta subunit GJQ55_13115 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GJQ55_13115 IPR000131 ATP synthase, F1 complex, gamma subunit GJQ55_13115 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site GJQ55_13120 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GJQ55_13120 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_13120 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GJQ55_13120 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GJQ55_13120 IPR005294 ATP synthase, F1 complex, alpha subunit GJQ55_13120 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily GJQ55_13120 IPR000793 ATP synthase, alpha subunit, C-terminal GJQ55_13120 IPR033732 ATP synthase, F1 complex, alpha subunit nucleotide-binding domain GJQ55_13120 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily GJQ55_13125 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily GJQ55_13125 IPR000711 ATPase, OSCP/delta subunit GJQ55_13130 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily GJQ55_13130 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GJQ55_13130 IPR005864 ATP synthase, F0 complex, subunit b, bacterial GJQ55_13135 IPR002379 V-ATPase proteolipid subunit C-like domain GJQ55_13135 IPR035921 F/V-ATP synthase subunit C superfamily GJQ55_13135 IPR000454 ATP synthase, F0 complex, subunit C GJQ55_13135 IPR038662 F1F0 ATP synthase subunit C superfamily GJQ55_13135 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GJQ55_13135 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site GJQ55_13140 IPR000568 ATP synthase, F0 complex, subunit A GJQ55_13140 IPR023011 ATP synthase, F0 complex, subunit A, active site GJQ55_13140 IPR035908 ATP synthase, F0 complex, subunit A superfamily GJQ55_13150 IPR041468 ParB/Spo0J, HTH domain GJQ55_13150 IPR004437 ParB/RepB/Spo0J partition protein GJQ55_13150 IPR036086 ParB/Sulfiredoxin superfamily GJQ55_13150 IPR003115 ParB/Sulfiredoxin GJQ55_13155 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_13155 IPR025669 AAA domain GJQ55_13160 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase GJQ55_13160 IPR003682 rRNA small subunit methyltransferase G GJQ55_13165 IPR036259 MFS transporter superfamily GJQ55_13165 IPR010645 Uncharacterised MFS-type transporter YbfB GJQ55_13180 IPR001789 Signal transduction response regulator, receiver domain GJQ55_13180 IPR001867 OmpR/PhoB-type DNA-binding domain GJQ55_13180 IPR036388 Winged helix-like DNA-binding domain superfamily GJQ55_13180 IPR039420 Transcriptional regulatory protein WalR-like GJQ55_13180 IPR016032 Signal transduction response regulator, C-terminal effector GJQ55_13180 IPR011006 CheY-like superfamily GJQ55_13185 IPR003594 Histidine kinase/HSP90-like ATPase GJQ55_13185 IPR003660 HAMP domain GJQ55_13185 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GJQ55_13185 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GJQ55_13185 IPR036890 Histidine kinase/HSP90-like ATPase superfamily GJQ55_13185 IPR005467 Histidine kinase domain GJQ55_13205 IPR020595 MnmG-related, conserved site GJQ55_13205 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GJQ55_13205 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GJQ55_13205 IPR026904 GidA associated domain 3 GJQ55_13205 IPR036188 FAD/NAD(P)-binding domain superfamily GJQ55_13230 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GJQ55_13230 IPR016174 Di-haem cytochrome, transmembrane GJQ55_13235 IPR029787 Nucleotide cyclase GJQ55_13235 IPR005330 MHYT domain GJQ55_13235 IPR000160 GGDEF domain GJQ55_13235 IPR035919 EAL domain superfamily GJQ55_13235 IPR001633 EAL domain GJQ55_13245 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GJQ55_13245 IPR027417 P-loop containing nucleoside triphosphate hydrolase GJQ55_13245 IPR025867 MnmE, helical domain GJQ55_13245 IPR027368 tRNA modification GTPase MnmE domain 2 GJQ55_13245 IPR005225 Small GTP-binding protein domain GJQ55_13245 IPR006073 GTP binding domain GJQ55_13245 IPR018948 GTP-binding protein TrmE, N-terminal GJQ55_13245 IPR031168 TrmE-type guanine nucleotide-binding domain GJQ55_13245 IPR004520 tRNA modification GTPase MnmE GJQ55_13250 IPR038221 YidC, periplasmic domain superfamily GJQ55_13250 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GJQ55_13250 IPR038210 Membrane insertase YidC, periplasmic domain GJQ55_13250 IPR028055 Membrane insertase YidC/Oxa1, C-terminal GJQ55_13250 IPR019998 Membrane insertase YidC GJQ55_13250 IPR028053 Membrane insertase YidC, N-terminal GJQ55_13255 IPR002696 Putative membrane protein insertion efficiency factor GJQ55_13260 IPR020568 Ribosomal protein S5 domain 2-type fold GJQ55_13260 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup GJQ55_13260 IPR000100 Ribonuclease P GJQ55_13260 IPR020539 Ribonuclease P, conserved site GJQ55_13265 IPR000271 Ribosomal protein L34 GJQ55_13265 IPR020939 Ribosomal protein L34, conserved site