locus-tag class description VA249_00010 IPR003593 AAA+ ATPase domain VA249_00010 IPR001957 Chromosomal replication control, initiator DnaA VA249_00010 IPR020591 Chromosomal replication control, initiator DnaA-like VA249_00010 IPR018312 Chromosomal replication control, initiator DnaA, conserved site VA249_00010 IPR013317 Chromosomal replication initiator protein DnaA VA249_00010 IPR013159 Chromosomal replication initiator, DnaA C-terminal VA249_00010 IPR024633 DnaA N-terminal domain VA249_00010 IPR038454 DnaA, N-terminal domain superfamily VA249_00010 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_00010 IPR010921 Trp repressor/replication initiator VA249_00020 IPR001001 DNA polymerase III, beta sliding clamp VA249_00020 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal VA249_00020 IPR022637 DNA polymerase III, beta sliding clamp, central VA249_00020 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal VA249_00030 IPR042174 DNA-binding RecF, domain 2 VA249_00030 IPR003395 RecF/RecN/SMC, N-terminal VA249_00030 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_00030 IPR018078 DNA-binding, RecF, conserved site VA249_00030 IPR001238 DNA-binding, RecF VA249_00040 IPR006171 TOPRIM domain VA249_00040 IPR018522 DNA topoisomerase, type IIA, conserved site VA249_00040 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 VA249_00040 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal VA249_00040 IPR013760 DNA topoisomerase, type IIA-like domain superfamily VA249_00040 IPR001241 DNA topoisomerase, type IIA VA249_00040 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VA249_00040 IPR020568 Ribosomal protein S5 domain 2-type fold VA249_00040 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VA249_00040 IPR003594 Histidine kinase/HSP90-like ATPase VA249_00040 IPR041423 DNA gyrase subunit B insert domain VA249_00040 IPR011557 DNA gyrase, subunit B VA249_00040 IPR002288 DNA gyrase B subunit, C-terminal VA249_00040 IPR034160 DNA gyrase subunit B, TOPRIM domain VA249_00050 IPR008978 HSP20-like chaperone VA249_00050 IPR023728 Small heat shock protein IbpA VA249_00050 IPR002068 Alpha crystallin/Hsp20 domain VA249_00050 IPR037913 Small heat shock protein IbpA/IbpB, ACD domain VA249_00060 IPR004839 Aminotransferase, class I/classII VA249_00060 IPR015424 Pyridoxal phosphate-dependent transferase VA249_00060 IPR015421 Pyridoxal phosphate-dependent transferase, major domain VA249_00070 IPR008909 DALR anticodon binding VA249_00070 IPR015944 Glycine-tRNA ligase, beta subunit VA249_00070 IPR006194 Glycine-tRNA synthetase, heterodimeric VA249_00080 IPR006194 Glycine-tRNA synthetase, heterodimeric VA249_00080 IPR002310 Glycine-tRNA ligase, alpha subunit VA249_00090 IPR001727 Gdt1 family VA249_00110 IPR022931 Sulfur carrier protein TusA VA249_00110 IPR001455 TusA-like domain VA249_00110 IPR036868 TusA-like domain superfamily VA249_00130 IPR037402 HTH-type transcriptional regulator YidZ, PBP2 domain VA249_00130 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_00130 IPR036390 Winged helix DNA-binding domain superfamily VA249_00130 IPR000847 Transcription regulator HTH, LysR VA249_00130 IPR005119 LysR, substrate-binding VA249_00130 IPR023746 Transcription regulator HTH, YidZ VA249_00140 IPR014188 Acrylyl-CoA reductase AcuI VA249_00140 IPR013149 Alcohol dehydrogenase, C-terminal VA249_00140 IPR013154 Alcohol dehydrogenase, N-terminal VA249_00140 IPR011032 GroES-like superfamily VA249_00140 IPR036291 NAD(P)-binding domain superfamily VA249_00140 IPR020843 Polyketide synthase, enoylreductase domain VA249_00150 IPR020616 Thiolase, N-terminal VA249_00150 IPR020613 Thiolase, conserved site VA249_00150 IPR020617 Thiolase, C-terminal VA249_00150 IPR020610 Thiolase, active site VA249_00150 IPR002155 Thiolase VA249_00150 IPR016039 Thiolase-like VA249_00150 IPR012805 Acetyl-CoA C-acyltransferase FadA VA249_00150 IPR020615 Thiolase, acyl-enzyme intermediate active site VA249_00160 IPR001753 Enoyl-CoA hydratase/isomerase VA249_00160 IPR036291 NAD(P)-binding domain superfamily VA249_00160 IPR012799 Fatty oxidation complex, alpha subunit FadB VA249_00160 IPR029045 ClpP/crotonase-like domain superfamily VA249_00160 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal VA249_00160 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily VA249_00160 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding VA249_00160 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site VA249_00170 IPR035647 EF-G domain III/V-like VA249_00170 IPR023582 Impact family VA249_00170 IPR015796 Impact family, bacterial/archaeal VA249_00170 IPR001498 Impact, N-terminal VA249_00170 IPR036956 Impact, N-terminal domain superfamily VA249_00170 IPR020568 Ribosomal protein S5 domain 2-type fold VA249_00170 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal VA249_00170 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site VA249_00180 IPR003445 Cation transporter VA249_00180 IPR004772 TrkH potassium transport family VA249_00190 IPR026816 Flavodoxin domain VA249_00190 IPR029039 Flavoprotein-like superfamily VA249_00190 IPR008254 Flavodoxin/nitric oxide synthase VA249_00190 IPR001226 Flavodoxin, conserved site VA249_00200 IPR003691 Putative fluoride ion transporter CrcB VA249_00210 IPR037509 Phosphomethylpyrimidine synthase VA249_00210 IPR025747 ThiC-associated domain VA249_00210 IPR038521 ThiC/Bza superfamily VA249_00210 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B VA249_00220 IPR034291 Thiamine phosphate synthase VA249_00220 IPR022998 Thiamine phosphate synthase/TenI VA249_00220 IPR013785 Aldolase-type TIM barrel VA249_00220 IPR036206 Thiamin phosphate synthase superfamily VA249_00230 IPR012731 Thiazole biosynthesis adenylyltransferase ThiF VA249_00230 IPR000594 THIF-type NAD/FAD binding fold VA249_00230 IPR035985 Ubiquitin-activating enzyme VA249_00240 IPR012675 Beta-grasp domain superfamily VA249_00240 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp VA249_00240 IPR010035 ThiS, thiamine-biosynthesis VA249_00240 IPR003749 Sulfur carrier ThiS/MoaD-like VA249_00250 IPR008867 Thiazole synthase VA249_00250 IPR033983 Thiazole synthase ThiG VA249_00250 IPR013785 Aldolase-type TIM barrel VA249_00260 IPR013785 Aldolase-type TIM barrel VA249_00260 IPR010722 Biotin and thiamin synthesis-associated domain VA249_00260 IPR007197 Radical SAM VA249_00260 IPR012726 Thiazole biosynthesis ThiH VA249_00260 IPR034428 ThiH/NocL/HydG-like VA249_00270 IPR000994 Peptidase M24 VA249_00270 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site VA249_00270 IPR001714 Peptidase M24, methionine aminopeptidase VA249_00270 IPR036005 Creatinase/aminopeptidase-like VA249_00270 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal VA249_00270 IPR000587 Creatinase, N-terminal VA249_00270 IPR001714 Peptidase M24, methionine aminopeptidase VA249_00270 IPR000994 Peptidase M24 VA249_00270 IPR000587 Creatinase, N-terminal VA249_00270 IPR036005 Creatinase/aminopeptidase-like VA249_00270 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal VA249_00270 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site VA249_00280 IPR037402 HTH-type transcriptional regulator YidZ, PBP2 domain VA249_00280 IPR036390 Winged helix DNA-binding domain superfamily VA249_00280 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_00280 IPR023746 Transcription regulator HTH, YidZ VA249_00280 IPR005119 LysR, substrate-binding VA249_00280 IPR000847 Transcription regulator HTH, LysR VA249_00290 IPR023697 Multidrug resistance protein MdtL VA249_00290 IPR011701 Major facilitator superfamily VA249_00290 IPR020846 Major facilitator superfamily domain VA249_00290 IPR036259 MFS transporter superfamily VA249_00290 IPR005829 Sugar transporter, conserved site VA249_00330 IPR007801 Uncharacterised protein family UPF0276 VA249_00330 IPR036237 Xylose isomerase-like superfamily VA249_00350 IPR014016 UvrD-like helicase, ATP-binding domain VA249_00350 IPR034739 UvrD/AddA helicase, N-terminal VA249_00350 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_00350 IPR000212 DNA helicase, UvrD/REP type VA249_00350 IPR014017 UvrD-like DNA helicase, C-terminal VA249_00350 IPR005753 DNA helicase, ATP-dependent, UvrD type VA249_00350 IPR013986 DExx box DNA helicase domain superfamily VA249_00360 IPR000101 Gamma-glutamyltranspeptidase VA249_00360 IPR029055 Nucleophile aminohydrolases, N-terminal VA249_00370 IPR004778 Homoserine/Threonine efflux protein VA249_00370 IPR001123 Amino acid exporter protein, LeuE-type VA249_00390 IPR000620 EamA domain VA249_00390 IPR004626 RarD protein VA249_00400 IPR018982 RQC domain VA249_00400 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain VA249_00400 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_00400 IPR002121 HRDC domain VA249_00400 IPR010997 HRDC-like superfamily VA249_00400 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_00400 IPR014001 Helicase superfamily 1/2, ATP-binding domain VA249_00400 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial VA249_00400 IPR004589 DNA helicase, ATP-dependent, RecQ type VA249_00400 IPR011545 DEAD/DEAH box helicase domain VA249_00400 IPR001650 Helicase, C-terminal VA249_00420 IPR003744 Queuosine precursor transporter VA249_00430 IPR023709 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase VA249_00430 IPR003695 Ppx/GppA phosphatase VA249_00430 IPR030673 Pyrophosphatase, GppA/Ppx-type VA249_00440 IPR014014 RNA helicase, DEAD-box type, Q motif VA249_00440 IPR023554 ATP-dependent RNA helicase RhlB type VA249_00440 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VA249_00440 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_00440 IPR014001 Helicase superfamily 1/2, ATP-binding domain VA249_00440 IPR011545 DEAD/DEAH box helicase domain VA249_00440 IPR001650 Helicase, C-terminal VA249_00450 IPR005746 Thioredoxin VA249_00450 IPR036249 Thioredoxin-like superfamily VA249_00450 IPR017937 Thioredoxin, conserved site VA249_00450 IPR013766 Thioredoxin domain VA249_00460 IPR011112 Rho termination factor, N-terminal VA249_00460 IPR004665 Transcription termination factor Rho VA249_00460 IPR011113 Rho termination factor, RNA-binding domain VA249_00460 IPR036269 Rho termination factor, N-terminal domain superfamily VA249_00460 IPR041703 Transcription termination factor Rho, ATP binding domain VA249_00460 IPR011129 Cold shock domain VA249_00460 IPR012340 Nucleic acid-binding, OB-fold VA249_00460 IPR003593 AAA+ ATPase domain VA249_00460 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_00460 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain VA249_00480 IPR002830 UbiD decarboxylyase family VA249_00490 IPR036010 2Fe-2S ferredoxin-like superfamily VA249_00490 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain VA249_00490 IPR001055 Adrenodoxin VA249_00490 IPR012675 Beta-grasp domain superfamily VA249_00490 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria VA249_00490 IPR018298 Adrenodoxin, iron-sulphur binding site VA249_00500 IPR017927 FAD-binding domain, ferredoxin reductase-type VA249_00500 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VA249_00500 IPR001433 Oxidoreductase FAD/NAD(P)-binding VA249_00500 IPR017938 Riboflavin synthase-like beta-barrel VA249_00520 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX VA249_00530 IPR039793 Uroporphyrinogen-III synthase VA249_00530 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily VA249_00530 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase VA249_00540 IPR000860 Porphobilinogen deaminase VA249_00540 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site VA249_00540 IPR022417 Porphobilinogen deaminase, N-terminal VA249_00540 IPR022418 Porphobilinogen deaminase, C-terminal VA249_00540 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily VA249_00550 IPR000274 Adenylate cyclase, class-I VA249_00550 IPR024686 Adenylate cyclase class-I, conserved site VA249_00550 IPR024685 Adenylate cyclase class-I, N-terminal domain VA249_00560 IPR002908 Frataxin/CyaY VA249_00560 IPR036524 Frataxin/CyaY superfamily VA249_00560 IPR020895 Frataxin conserved site VA249_00570 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site VA249_00570 IPR029066 PLP-binding barrel VA249_00570 IPR000183 Ornithine/DAP/Arg decarboxylase VA249_00570 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal VA249_00570 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal VA249_00570 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal VA249_00570 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site VA249_00570 IPR002986 Diaminopimelate decarboxylase, LysA VA249_00580 IPR018510 Diaminopimelate epimerase, active site VA249_00580 IPR001653 Diaminopimelate epimerase, DapF VA249_00600 IPR011010 DNA breaking-rejoining enzyme, catalytic core VA249_00600 IPR013762 Integrase-like, catalytic domain superfamily VA249_00600 IPR002104 Integrase, catalytic domain VA249_00600 IPR010998 Integrase/recombinase, N-terminal VA249_00600 IPR004107 Integrase, SAM-like, N-terminal VA249_00600 IPR011931 Tyrosine recombinase XerC VA249_00600 IPR023009 Tyrosine recombinase XerC/XerD VA249_00610 IPR036412 HAD-like superfamily VA249_00610 IPR006439 HAD hydrolase, subfamily IA VA249_00610 IPR041492 Haloacid dehalogenase-like hydrolase VA249_00610 IPR023214 HAD superfamily VA249_00620 IPR039262 DTW domain-containing protein 2 VA249_00620 IPR005636 DTW VA249_00650 IPR000150 Cof family VA249_00650 IPR036412 HAD-like superfamily VA249_00650 IPR006379 HAD-superfamily hydrolase, subfamily IIB VA249_00650 IPR023214 HAD superfamily VA249_00660 IPR029058 Alpha/Beta hydrolase fold VA249_00660 IPR022742 Serine aminopeptidase, S33 VA249_00670 IPR001123 Amino acid exporter protein, LeuE-type VA249_00680 IPR011991 ArsR-like helix-turn-helix domain VA249_00680 IPR001845 HTH ArsR-type DNA-binding domain VA249_00680 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_00680 IPR036390 Winged helix DNA-binding domain superfamily VA249_00690 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I VA249_00690 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain VA249_00690 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain VA249_00690 IPR036291 NAD(P)-binding domain superfamily VA249_00690 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site VA249_00690 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family VA249_00740 IPR019635 Protein of unknown function DUF2500 VA249_00790 IPR002052 DNA methylase, N-6 adenine-specific, conserved site VA249_00790 IPR004398 RNA methyltransferase, RsmD VA249_00790 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VA249_00800 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain VA249_00800 IPR003593 AAA+ ATPase domain VA249_00800 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_00800 IPR013822 Signal recognition particle SRP54, helical bundle VA249_00800 IPR004390 Signal-recognition particle receptor FtsY VA249_00800 IPR036225 SRP/SRP receptor, N-terminal VA249_00800 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily VA249_00810 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_00810 IPR005286 Cell division protein FtsE, ATP-binding VA249_00810 IPR017871 ABC transporter, conserved site VA249_00810 IPR003439 ABC transporter-like VA249_00810 IPR003593 AAA+ ATPase domain VA249_00820 IPR004513 Cell division protein FtsX VA249_00820 IPR040690 FtsX, extracellular domain VA249_00830 IPR007630 RNA polymerase sigma-70 region 4 VA249_00830 IPR013324 RNA polymerase sigma factor, region 3/4-like VA249_00830 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria VA249_00830 IPR014284 RNA polymerase sigma-70 like domain VA249_00830 IPR000943 RNA polymerase sigma-70 VA249_00830 IPR009042 RNA polymerase sigma-70 region 1.2 VA249_00830 IPR007627 RNA polymerase sigma-70 region 2 VA249_00830 IPR013325 RNA polymerase sigma factor, region 2 VA249_00850 IPR001763 Rhodanese-like domain VA249_00850 IPR023695 Thiosulfate sulfurtransferase, bacterial VA249_00850 IPR036873 Rhodanese-like domain superfamily VA249_00860 IPR035952 Rhomboid-like superfamily VA249_00860 IPR022764 Peptidase S54, rhomboid domain VA249_00860 IPR022732 Peptidase S54, GlpG peptidase, N-terminal VA249_00860 IPR023662 Rhomboid protease GlpG VA249_00860 IPR038236 GlpG peptidase, N-terminal domain superfamily VA249_00870 IPR005503 Flagellar basal body-associated protein FliL VA249_00880 IPR007440 Chorismate--pyruvate lyase VA249_00880 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily VA249_00890 IPR006370 4-hydroxybenzoate polyprenyltransferase-like VA249_00890 IPR039653 Prenyltransferase VA249_00890 IPR000537 UbiA prenyltransferase family VA249_00900 IPR002123 Phospholipid/glycerol acyltransferase VA249_00900 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB VA249_00900 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase VA249_00900 IPR041728 GPAT/DHAPAT, acyltransferase domain VA249_00910 IPR036390 Winged helix DNA-binding domain superfamily VA249_00910 IPR006200 Transcription regulator LexA VA249_00910 IPR039418 LexA-like VA249_00910 IPR036286 LexA/Signal peptidase-like superfamily VA249_00910 IPR006199 LexA repressor, DNA-binding domain VA249_00910 IPR006197 Peptidase S24, LexA-like VA249_00910 IPR015927 Peptidase S24/S26A/S26B/S26C VA249_00910 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_00930 IPR002528 Multi antimicrobial extrusion protein VA249_00940 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily VA249_00940 IPR036188 FAD/NAD(P)-binding domain superfamily VA249_00940 IPR022962 Soluble pyridine nucleotide transhydrogenase VA249_00940 IPR023753 FAD/NAD(P)-binding domain VA249_00940 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I VA249_00940 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VA249_00950 IPR009057 Homeobox-like domain superfamily VA249_00950 IPR023764 Transcriptional repressor HTH, FabR VA249_00950 IPR001647 DNA-binding HTH domain, TetR-type VA249_00970 IPR030390 RNA methyltransferase TrmA, active site VA249_00970 IPR030391 RNA methyltransferase TrmA, conserved site VA249_00970 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VA249_00970 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA VA249_00970 IPR010280 (Uracil-5)-methyltransferase family VA249_00980 IPR039426 Vitamin B12 transporter BtuB-like VA249_00980 IPR010101 TonB-dependent vitamin B12 transporter BtuB VA249_00980 IPR012910 TonB-dependent receptor, plug domain VA249_00980 IPR037066 TonB-dependent receptor, plug domain superfamily VA249_00980 IPR000531 TonB-dependent receptor-like, beta-barrel VA249_00980 IPR010916 TonB box, conserved site VA249_00980 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily VA249_01000 IPR018187 Asp/Glu racemase, active site 1 VA249_01000 IPR001920 Asp/Glu racemase VA249_01000 IPR004391 Glutamate racemase VA249_01000 IPR015942 Asp/Glu/hydantoin racemase VA249_01020 IPR025166 Integrase, DNA-binding domain VA249_01020 IPR038488 Integrase, DNA-binding domain superfamily VA249_01020 IPR004107 Integrase, SAM-like, N-terminal VA249_01020 IPR002104 Integrase, catalytic domain VA249_01020 IPR010998 Integrase/recombinase, N-terminal VA249_01020 IPR011010 DNA breaking-rejoining enzyme, catalytic core VA249_01020 IPR013762 Integrase-like, catalytic domain superfamily VA249_01100 IPR010975 Phosphotransferase system, alpha-glucoside-specific IIBC component VA249_01100 IPR036878 Glucose permease domain IIB VA249_01100 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site VA249_01100 IPR003352 Phosphotransferase system, EIIC VA249_01100 IPR013013 Phosphotransferase system, EIIC component, type 1 VA249_01100 IPR001996 Phosphotransferase system, IIB component, type 1 VA249_01100 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component VA249_01110 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal VA249_01110 IPR022616 Glycosyl hydrolase, family 4, C-terminal VA249_01110 IPR036291 NAD(P)-binding domain superfamily VA249_01110 IPR001088 Glycoside hydrolase, family 4 VA249_01110 IPR019802 Glycoside hydrolase, family 4, conserved site VA249_01120 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily VA249_01120 IPR000524 Transcription regulator HTH, GntR VA249_01120 IPR011663 UbiC transcription regulator-associated VA249_01120 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_01120 IPR036390 Winged helix DNA-binding domain superfamily VA249_01170 IPR001736 Phospholipase D/Transphosphatidylase VA249_01170 IPR016270 CDP-alcohol phosphatidyltransferase class-II family VA249_01170 IPR025202 Phospholipase D-like domain VA249_01190 IPR006094 FAD linked oxidase, N-terminal VA249_01190 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily VA249_01190 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal VA249_01190 IPR016169 FAD-binding, type PCMH, subdomain 2 VA249_01190 IPR016167 FAD-binding, type PCMH, subdomain 1 VA249_01190 IPR036318 FAD-binding, type PCMH-like superfamily VA249_01190 IPR016166 FAD-binding domain, PCMH-type VA249_01190 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase VA249_01200 IPR030855 Bifunctional ligase/repressor BirA VA249_01200 IPR008988 Transcriptional repressor, C-terminal VA249_01200 IPR013196 Helix-turn-helix, type 11 VA249_01200 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain VA249_01200 IPR003142 Biotin protein ligase, C-terminal VA249_01200 IPR004409 Biotin operon repressor, helix-turn-helix domain VA249_01200 IPR004408 Biotin--acetyl-CoA-carboxylase ligase VA249_01200 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_01200 IPR036390 Winged helix DNA-binding domain superfamily VA249_01210 IPR006083 Phosphoribulokinase/uridine kinase VA249_01210 IPR004566 Pantothenate kinase VA249_01210 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_01220 IPR006083 Phosphoribulokinase/uridine kinase VA249_01220 IPR004566 Pantothenate kinase VA249_01220 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_01230 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain VA249_01230 IPR004161 Translation elongation factor EFTu-like, domain 2 VA249_01230 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle VA249_01230 IPR005225 Small GTP-binding protein domain VA249_01230 IPR000795 Transcription factor, GTP-binding domain VA249_01230 IPR009000 Translation protein, beta-barrel domain superfamily VA249_01230 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal VA249_01230 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal VA249_01230 IPR033720 Elongation factor Tu, domain 2 VA249_01230 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_01230 IPR031157 Tr-type G domain, conserved site VA249_01240 IPR005807 SecE subunit of protein translocation complex, bacterial-like VA249_01240 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit VA249_01240 IPR038379 SecE superfamily VA249_01250 IPR008991 Translation protein SH3-like domain superfamily VA249_01250 IPR005824 KOW VA249_01250 IPR006645 NusG, N-terminal VA249_01250 IPR036735 NusG, N-terminal domain superfamily VA249_01250 IPR014722 Ribosomal protein L2, domain 2 VA249_01250 IPR001062 Transcription antitermination protein, NusG VA249_01250 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site VA249_01260 IPR000911 Ribosomal protein L11/L12 VA249_01260 IPR020784 Ribosomal protein L11, N-terminal VA249_01260 IPR006519 Ribosomal protein L11, bacterial-type VA249_01260 IPR020783 Ribosomal protein L11, C-terminal VA249_01260 IPR036769 Ribosomal protein L11, C-terminal domain superfamily VA249_01260 IPR020785 Ribosomal protein L11, conserved site VA249_01260 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily VA249_01270 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein VA249_01270 IPR023674 Ribosomal protein L1-like VA249_01270 IPR002143 Ribosomal protein L1 VA249_01270 IPR005878 Ribosomal protein L1, bacterial-type VA249_01270 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich VA249_01270 IPR023673 Ribosomal protein L1, conserved site VA249_01280 IPR001790 Ribosomal protein L10P VA249_01280 IPR022973 Ribosomal protein L10 VA249_01290 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily VA249_01290 IPR008932 Ribosomal protein L7/L12, oligomerisation VA249_01290 IPR013823 Ribosomal protein L7/L12, C-terminal VA249_01290 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like VA249_01290 IPR000206 Ribosomal protein L7/L12 VA249_01300 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain VA249_01300 IPR015712 DNA-directed RNA polymerase, subunit 2 VA249_01300 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain VA249_01300 IPR007121 RNA polymerase, beta subunit, conserved site VA249_01300 IPR007644 RNA polymerase, beta subunit, protrusion VA249_01300 IPR007642 RNA polymerase Rpb2, domain 2 VA249_01300 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily VA249_01300 IPR037034 RNA polymerase Rpb2, domain 2 superfamily VA249_01300 IPR007641 RNA polymerase Rpb2, domain 7 VA249_01300 IPR014724 RNA polymerase Rpb2, OB-fold VA249_01300 IPR007645 RNA polymerase Rpb2, domain 3 VA249_01300 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type VA249_01310 IPR012754 DNA-directed RNA polymerase, subunit beta-prime VA249_01310 IPR000722 RNA polymerase, alpha subunit VA249_01310 IPR006592 RNA polymerase, N-terminal VA249_01310 IPR007080 RNA polymerase Rpb1, domain 1 VA249_01310 IPR007066 RNA polymerase Rpb1, domain 3 VA249_01310 IPR042102 RNA polymerase Rpb1, domain 3 superfamily VA249_01310 IPR007083 RNA polymerase Rpb1, domain 4 VA249_01310 IPR007081 RNA polymerase Rpb1, domain 5 VA249_01310 IPR038120 RNA polymerase Rpb1, funnel domain superfamily VA249_01320 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ VA249_01320 IPR038309 Rsd/AlgQ superfamily VA249_01320 IPR023785 Regulator of RNA polymerase sigma(70) subunit, Rsd VA249_01330 IPR022925 NADH pyrophosphatase NudC VA249_01330 IPR020084 NUDIX hydrolase, conserved site VA249_01330 IPR000086 NUDIX hydrolase domain VA249_01330 IPR015376 Zinc ribbon, NADH pyrophosphatase VA249_01330 IPR015797 NUDIX hydrolase-like domain superfamily VA249_01340 IPR006361 Uroporphyrinogen decarboxylase HemE VA249_01340 IPR038071 UROD/MetE-like superfamily VA249_01340 IPR000257 Uroporphyrinogen decarboxylase (URO-D) VA249_01350 IPR005122 Uracil-DNA glycosylase-like VA249_01350 IPR036895 Uracil-DNA glycosylase-like domain superfamily VA249_01360 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VA249_01360 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain VA249_01360 IPR036291 NAD(P)-binding domain superfamily VA249_01360 IPR023514 Glyoxylate/hydroxypyruvate reductase A VA249_01370 IPR007338 Protein of unknown function DUF416 VA249_01370 IPR023381 YP001051499.1-like domain superfamily VA249_01380 IPR000644 CBS domain VA249_01380 IPR002550 CNNM, transmembrane domain VA249_01390 IPR000119 Histone-like DNA-binding protein VA249_01390 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily VA249_01390 IPR020816 Histone-like DNA-binding protein, conserved site VA249_01410 IPR013815 ATP-grasp fold, subdomain 1 VA249_01410 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain VA249_01410 IPR000115 Phosphoribosylglycinamide synthetase VA249_01410 IPR020560 Phosphoribosylglycinamide synthetase, C-domain VA249_01410 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily VA249_01410 IPR020559 Phosphoribosylglycinamide synthetase, conserved site VA249_01410 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal VA249_01410 IPR011054 Rudiment single hybrid motif VA249_01410 IPR016185 Pre-ATP-grasp domain superfamily VA249_01410 IPR011761 ATP-grasp fold VA249_01420 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain VA249_01420 IPR000115 Phosphoribosylglycinamide synthetase VA249_01420 IPR020560 Phosphoribosylglycinamide synthetase, C-domain VA249_01420 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily VA249_01420 IPR020559 Phosphoribosylglycinamide synthetase, conserved site VA249_01420 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal VA249_01420 IPR011054 Rudiment single hybrid motif VA249_01420 IPR016185 Pre-ATP-grasp domain superfamily VA249_01420 IPR011761 ATP-grasp fold VA249_01420 IPR013815 ATP-grasp fold, subdomain 1 VA249_01430 IPR016193 Cytidine deaminase-like VA249_01430 IPR024051 AICAR transformylase, duplicated domain superfamily VA249_01430 IPR002695 Bifunctional purine biosynthesis protein PurH-like VA249_01430 IPR036914 Methylglyoxal synthase-like domain superfamily VA249_01430 IPR011607 Methylglyoxal synthase-like domain VA249_01440 IPR009061 Putative DNA-binding domain superfamily VA249_01440 IPR011788 Zn(II)-responsive transcriptional regulator VA249_01440 IPR000551 MerR-type HTH domain VA249_01450 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_01450 IPR040970 CadC C-terminal domain 1 VA249_01450 IPR011990 Tetratricopeptide-like helical domain superfamily VA249_01450 IPR016032 Signal transduction response regulator, C-terminal effector VA249_01450 IPR001867 OmpR/PhoB-type DNA-binding domain VA249_01450 IPR039420 Transcriptional regulatory protein WalR-like VA249_01460 IPR004754 Amino acid antiporter VA249_01460 IPR002293 Amino acid/polyamine transporter I VA249_01470 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 VA249_01470 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily VA249_01470 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal VA249_01470 IPR000310 Orn/Lys/Arg decarboxylase, major domain VA249_01470 IPR011193 Ornithine/lysine/arginine decarboxylase VA249_01470 IPR015424 Pyridoxal phosphate-dependent transferase VA249_01470 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal VA249_01470 IPR015421 Pyridoxal phosphate-dependent transferase, major domain VA249_01490 IPR029787 Nucleotide cyclase VA249_01490 IPR000014 PAS domain VA249_01490 IPR000700 PAS-associated, C-terminal VA249_01490 IPR035965 PAS domain superfamily VA249_01490 IPR013656 PAS fold-4 VA249_01490 IPR000160 GGDEF domain VA249_01500 IPR005412 DNA-binding protein Fis VA249_01500 IPR009057 Homeobox-like domain superfamily VA249_01500 IPR002197 DNA binding HTH domain, Fis-type VA249_01510 IPR013785 Aldolase-type TIM barrel VA249_01510 IPR032887 tRNA-dihydrouridine synthase B VA249_01510 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal VA249_01510 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 VA249_01510 IPR001269 tRNA-dihydrouridine synthase VA249_01510 IPR018517 tRNA-dihydrouridine synthase, conserved site VA249_01510 IPR035587 DUS-like, FMN-binding domain VA249_01520 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VA249_01520 IPR004498 Ribosomal protein L11 methyltransferase VA249_01530 IPR011054 Rudiment single hybrid motif VA249_01530 IPR013815 ATP-grasp fold, subdomain 1 VA249_01530 IPR011761 ATP-grasp fold VA249_01530 IPR016185 Pre-ATP-grasp domain superfamily VA249_01530 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain VA249_01530 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase VA249_01530 IPR011764 Biotin carboxylation domain VA249_01530 IPR005481 Biotin carboxylase-like, N-terminal domain VA249_01530 IPR005482 Biotin carboxylase, C-terminal VA249_01540 IPR001249 Acetyl-CoA biotin carboxyl carrier VA249_01540 IPR001882 Biotin-binding site VA249_01540 IPR000089 Biotin/lipoyl attachment VA249_01540 IPR011053 Single hybrid motif VA249_01550 IPR001874 Dehydroquinase, class II VA249_01550 IPR018509 Dehydroquinase, class II, conserved site VA249_01550 IPR036441 Dehydroquinase, class II superfamily VA249_01560 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain VA249_01560 IPR025110 AMP-binding enzyme, C-terminal domain VA249_01560 IPR000873 AMP-dependent synthetase/ligase VA249_01560 IPR042099 AMP-dependent synthetase-like superfamily VA249_01560 IPR011904 Acetate-CoA ligase VA249_01560 IPR020845 AMP-binding, conserved site VA249_01590 IPR026032 Probable 3-phenylpropionic acid transporter VA249_01590 IPR024989 Major facilitator superfamily associated domain VA249_01590 IPR036259 MFS transporter superfamily VA249_01600 IPR011006 CheY-like superfamily VA249_01600 IPR003594 Histidine kinase/HSP90-like ATPase VA249_01600 IPR005467 Histidine kinase domain VA249_01600 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain VA249_01600 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily VA249_01600 IPR036641 HPT domain superfamily VA249_01600 IPR037952 Sensor histidine kinase TorS, sensor domain VA249_01600 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VA249_01600 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain VA249_01600 IPR001789 Signal transduction response regulator, receiver domain VA249_01600 IPR038188 TorS, sensor domain superfamily VA249_01600 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VA249_01600 IPR003660 HAMP domain VA249_01620 IPR038377 Sodium/glucose symporter superfamily VA249_01620 IPR001734 Sodium/solute symporter VA249_01620 IPR019899 Sodium/solute symporter, VC2705 subfamily VA249_01640 IPR002771 Multiple antibiotic resistance (MarC)-related VA249_01650 IPR001789 Signal transduction response regulator, receiver domain VA249_01650 IPR000792 Transcription regulator LuxR, C-terminal VA249_01650 IPR011006 CheY-like superfamily VA249_01650 IPR016032 Signal transduction response regulator, C-terminal effector VA249_01660 IPR003834 Cytochrome C biogenesis protein, transmembrane domain VA249_01660 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain VA249_01660 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily VA249_01660 IPR022910 Thiol:disulphide interchange protein DsbD VA249_01660 IPR013766 Thioredoxin domain VA249_01660 IPR017937 Thioredoxin, conserved site VA249_01660 IPR036249 Thioredoxin-like superfamily VA249_01660 IPR035671 DsbD gamma VA249_01670 IPR004668 Anaerobic c4-dicarboxylate membrane transporter VA249_01680 IPR008948 L-Aspartase-like VA249_01680 IPR004708 Aspartate ammonia-lyase VA249_01680 IPR018951 Fumarase C, C-terminal VA249_01680 IPR020557 Fumarate lyase, conserved site VA249_01680 IPR000362 Fumarate lyase family VA249_01680 IPR024083 Fumarase/histidase, N-terminal VA249_01680 IPR022761 Fumarate lyase, N-terminal VA249_01690 IPR007313 FxsA cytoplasmic membrane protein VA249_01700 IPR029028 Alpha/beta knot methyltransferases VA249_01700 IPR001537 tRNA/rRNA methyltransferase, SpoU type VA249_01700 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase VA249_01700 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VA249_01710 IPR038515 CpxA, periplasmic domain superfamily VA249_01710 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VA249_01710 IPR003660 HAMP domain VA249_01710 IPR003594 Histidine kinase/HSP90-like ATPase VA249_01710 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VA249_01710 IPR005467 Histidine kinase domain VA249_01710 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain VA249_01710 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily VA249_01710 IPR032404 Two-component sensor protein CpxA, periplasmic domain VA249_01720 IPR011006 CheY-like superfamily VA249_01720 IPR001867 OmpR/PhoB-type DNA-binding domain VA249_01720 IPR001789 Signal transduction response regulator, receiver domain VA249_01720 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_01720 IPR039420 Transcriptional regulatory protein WalR-like VA249_01730 IPR012899 LTXXQ motif family protein VA249_01740 IPR027469 Cation efflux transmembrane domain superfamily VA249_01740 IPR023783 Cation efflux pump FieF VA249_01740 IPR002524 Cation efflux protein VA249_01740 IPR027470 Cation efflux protein, cytoplasmic domain VA249_01740 IPR036837 Cation efflux protein, cytoplasmic domain superfamily VA249_01750 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type VA249_01750 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic VA249_01750 IPR015912 Phosphofructokinase, conserved site VA249_01750 IPR000023 Phosphofructokinase domain VA249_01750 IPR035966 Phosphofructokinase superfamily VA249_01750 IPR022953 ATP-dependent 6-phosphofructokinase VA249_01760 IPR002528 Multi antimicrobial extrusion protein VA249_01770 IPR018369 Chaperonin GroES, conserved site VA249_01770 IPR020818 GroES chaperonin family VA249_01770 IPR037124 GroES chaperonin superfamily VA249_01770 IPR011032 GroES-like superfamily VA249_01780 IPR018370 Chaperonin Cpn60, conserved site VA249_01780 IPR001844 Chaperonin Cpn60 VA249_01780 IPR002423 Chaperonin Cpn60/TCP-1 family VA249_01780 IPR027409 GroEL-like apical domain superfamily VA249_01780 IPR027413 GroEL-like equatorial domain superfamily VA249_01780 IPR027410 TCP-1-like chaperonin intermediate domain superfamily VA249_01800 IPR003416 MgtC/SapB/SrpB/YhiD family VA249_01810 IPR013785 Aldolase-type TIM barrel VA249_01810 IPR022462 Lysine-2,3-aminomutase-like VA249_01810 IPR007197 Radical SAM VA249_01810 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase VA249_01820 IPR015365 Elongation factor P, C-terminal VA249_01820 IPR011768 Translation elongation factor P VA249_01820 IPR013852 Translation elongation factor P/YeiP, conserved site VA249_01820 IPR001059 Translation elongation factor P/YeiP, central VA249_01820 IPR008991 Translation protein SH3-like domain superfamily VA249_01820 IPR020599 Translation elongation factor P/YeiP VA249_01820 IPR014722 Ribosomal protein L2, domain 2 VA249_01820 IPR012340 Nucleic acid-binding, OB-fold VA249_01820 IPR013185 Translation elongation factor, KOW-like VA249_01830 IPR003418 Fumarate reductase, subunit D VA249_01830 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit VA249_01840 IPR003510 Fumarate reductase, subunit C VA249_01840 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit VA249_01850 IPR009051 Alpha-helical ferredoxin VA249_01850 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal VA249_01850 IPR012675 Beta-grasp domain superfamily VA249_01850 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein VA249_01850 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site VA249_01850 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VA249_01850 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VA249_01850 IPR036010 2Fe-2S ferredoxin-like superfamily VA249_01850 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain VA249_01860 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain VA249_01860 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily VA249_01860 IPR005884 Fumarate reductase, flavoprotein subunit VA249_01860 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit VA249_01860 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily VA249_01860 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site VA249_01860 IPR036188 FAD/NAD(P)-binding domain superfamily VA249_01860 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal VA249_01870 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) VA249_01870 IPR004525 Elongation factor P--(R)-beta-lysine ligase VA249_01870 IPR006195 Aminoacyl-tRNA synthetase, class II VA249_01890 IPR023772 DNA-binding HTH domain, TetR-type, conserved site VA249_01890 IPR009057 Homeobox-like domain superfamily VA249_01890 IPR001647 DNA-binding HTH domain, TetR-type VA249_01890 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily VA249_01890 IPR013571 Transcription regulator QacR, C-terminal VA249_01910 IPR011055 Duplicated hybrid motif VA249_01910 IPR016047 Peptidase M23 VA249_01920 IPR001451 Hexapeptide repeat VA249_01920 IPR018357 Hexapeptide transferase, conserved site VA249_01920 IPR010493 Serine acetyltransferase, N-terminal VA249_01920 IPR042122 Serine acetyltransferase, N-terminal domain superfamily VA249_01920 IPR005881 Serine O-acetyltransferase VA249_01920 IPR011004 Trimeric LpxA-like superfamily VA249_01930 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily VA249_01930 IPR013328 6-phosphogluconate dehydrogenase, domain 2 VA249_01930 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent VA249_01930 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal VA249_01930 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal VA249_01930 IPR036291 NAD(P)-binding domain superfamily VA249_01940 IPR003708 Bacterial protein export chaperone SecB VA249_01940 IPR035958 SecB-like superfamily VA249_01950 IPR001763 Rhodanese-like domain VA249_01950 IPR036873 Rhodanese-like domain superfamily VA249_01960 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent VA249_01960 IPR011258 BPG-independent PGAM, N-terminal VA249_01960 IPR006124 Metalloenzyme VA249_01960 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily VA249_01960 IPR017850 Alkaline-phosphatase-like, core domain superfamily VA249_01980 IPR033479 Double Cache domain 1 VA249_01980 IPR003660 HAMP domain VA249_01980 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VA249_01980 IPR029151 Periplasmic sensor-like domain superfamily VA249_01990 IPR031312 Sodium/sulphate symporter, conserved site VA249_01990 IPR001898 Solute carrier family 13 VA249_02010 IPR033177 Phosphatidylserine decarboxylase VA249_02010 IPR003817 Phosphatidylserine decarboxylase-related VA249_02010 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 VA249_02020 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_02020 IPR004881 Ribosome biogenesis GTPase RsgA VA249_02020 IPR010914 RsgA GTPase domain VA249_02020 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain VA249_02030 IPR036397 Ribonuclease H superfamily VA249_02030 IPR013520 Exonuclease, RNase T/DNA polymerase III VA249_02030 IPR022894 Oligoribonuclease VA249_02030 IPR012337 Ribonuclease H-like superfamily VA249_02040 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VA249_02040 IPR013542 Domain of unknown function DUF1730 VA249_02040 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VA249_02040 IPR004453 Epoxyqueuosine reductase QueG VA249_02050 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_02050 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE VA249_02060 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain VA249_02070 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VA249_02070 IPR020568 Ribosomal protein S5 domain 2-type fold VA249_02070 IPR037198 MutL, C-terminal domain superfamily VA249_02070 IPR042121 MutL, C-terminal domain, regulatory subdomain VA249_02070 IPR042120 MutL, C-terminal domain, dimerisation subdomain VA249_02070 IPR038973 DNA mismatch repair protein MutL/Mlh/Pms VA249_02070 IPR013507 DNA mismatch repair protein, S5 domain 2-like VA249_02070 IPR002099 DNA mismatch repair protein family, N-terminal VA249_02070 IPR020667 DNA mismatch repair protein, MutL VA249_02070 IPR014762 DNA mismatch repair, conserved site VA249_02070 IPR014790 MutL, C-terminal, dimerisation VA249_02070 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VA249_02080 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_02080 IPR018022 IPP transferase VA249_02080 IPR039657 Dimethylallyltransferase VA249_02090 IPR005001 RNA-binding protein Hfq VA249_02090 IPR010920 LSM domain superfamily VA249_02100 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_02100 IPR025121 GTPase HflX, N-terminal VA249_02100 IPR016496 GTPase HflX VA249_02100 IPR042108 GTPase HflX, N-terminal domain superfamily VA249_02100 IPR032305 GTP-binding protein, middle domain VA249_02100 IPR030394 HflX-type guanine nucleotide-binding (G) domain VA249_02100 IPR035647 EF-G domain III/V-like VA249_02100 IPR006073 GTP binding domain VA249_02110 IPR001107 Band 7 domain VA249_02110 IPR036013 Band 7/SPFH domain superfamily VA249_02110 IPR010201 HflK VA249_02110 IPR020980 Menbrane protein HflK, N-terminal VA249_02110 IPR001972 Stomatin family VA249_02120 IPR010200 HflC VA249_02120 IPR036013 Band 7/SPFH domain superfamily VA249_02120 IPR001107 Band 7 domain VA249_02130 IPR019201 Protein of unknown function DUF2065 VA249_02140 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_02140 IPR001114 Adenylosuccinate synthetase VA249_02140 IPR018220 Adenylosuccinate synthase, GTP-binding site VA249_02140 IPR042110 Adenylosuccinate synthetase, domain 2 VA249_02140 IPR042109 Adenylosuccinate synthetase, domain 1 VA249_02140 IPR033128 Adenylosuccinate synthase, active site VA249_02140 IPR042111 Adenylosuccinate synthetase, domain 3 VA249_02150 IPR006597 Sel1-like repeat VA249_02150 IPR011990 Tetratricopeptide-like helical domain superfamily VA249_02160 IPR000971 Globin VA249_02160 IPR009050 Globin-like superfamily VA249_02160 IPR023950 Flavohemoprotein VA249_02160 IPR001433 Oxidoreductase FAD/NAD(P)-binding VA249_02160 IPR017938 Riboflavin synthase-like beta-barrel VA249_02160 IPR012292 Globin/Protoglobin VA249_02160 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VA249_02160 IPR017927 FAD-binding domain, ferredoxin reductase-type VA249_02160 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase VA249_02160 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain VA249_02170 IPR030489 Transcription regulator Rrf2-type, conserved site VA249_02170 IPR000944 Transcription regulator Rrf2-type VA249_02170 IPR023761 Transcriptional repressor HTH, NsrR VA249_02170 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_02170 IPR036390 Winged helix DNA-binding domain superfamily VA249_02180 IPR011129 Cold shock domain VA249_02180 IPR040476 RNase II/RNase R, cold shock domain VA249_02180 IPR012340 Nucleic acid-binding, OB-fold VA249_02180 IPR013223 Ribonuclease B, N-terminal OB domain VA249_02180 IPR001900 Ribonuclease II/R VA249_02180 IPR022966 Ribonuclease II/R, conserved site VA249_02180 IPR004476 Ribonuclease II/ribonuclease R VA249_02180 IPR013668 Ribonuclease R winged-helix domain VA249_02180 IPR022967 RNA-binding domain, S1 VA249_02180 IPR003029 S1 domain VA249_02180 IPR011805 Ribonuclease R VA249_02190 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB VA249_02190 IPR029064 50S ribosomal protein L30e-like VA249_02190 IPR004441 RNA methyltransferase TrmH family VA249_02190 IPR001537 tRNA/rRNA methyltransferase, SpoU type VA249_02190 IPR013123 RNA 2-O ribose methyltransferase, substrate binding VA249_02190 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VA249_02190 IPR029028 Alpha/beta knot methyltransferases VA249_02200 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic VA249_02200 IPR037512 Phosphoglycolate phosphatase, prokaryotic VA249_02200 IPR006439 HAD hydrolase, subfamily IA VA249_02200 IPR006549 HAD-superfamily hydrolase,subfamily IIIA VA249_02200 IPR041492 Haloacid dehalogenase-like hydrolase VA249_02200 IPR036412 HAD-like superfamily VA249_02200 IPR023198 Phosphoglycolate phosphatase-like, domain 2 VA249_02200 IPR023214 HAD superfamily VA249_02210 IPR002305 Aminoacyl-tRNA synthetase, class Ic VA249_02210 IPR002306 Tryptophan-tRNA ligase VA249_02210 IPR024109 Tryptophan-tRNA ligase, bacterial-type VA249_02210 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VA249_02220 IPR029062 Class I glutamine amidotransferase-like VA249_02220 IPR017926 Glutamine amidotransferase VA249_02220 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain VA249_02230 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria VA249_02230 IPR004636 Acetylornithine/Succinylornithine transaminase family VA249_02230 IPR005814 Aminotransferase class-III VA249_02230 IPR015424 Pyridoxal phosphate-dependent transferase VA249_02230 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 VA249_02230 IPR015421 Pyridoxal phosphate-dependent transferase, major domain VA249_02240 IPR017650 Arginine N-succinyltransferase VA249_02240 IPR007041 Arginine N-succinyltransferase AstA/AruG VA249_02240 IPR016181 Acyl-CoA N-acyltransferase VA249_02250 IPR016161 Aldehyde/histidinol dehydrogenase VA249_02250 IPR016163 Aldehyde dehydrogenase, C-terminal VA249_02250 IPR016160 Aldehyde dehydrogenase, cysteine active site VA249_02250 IPR029510 Aldehyde dehydrogenase, glutamic acid active site VA249_02250 IPR016162 Aldehyde dehydrogenase, N-terminal VA249_02250 IPR015590 Aldehyde dehydrogenase domain VA249_02250 IPR017649 Succinylglutamate-semialdehyde dehydrogenase VA249_02270 IPR036390 Winged helix DNA-binding domain superfamily VA249_02270 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_02270 IPR018335 Transcription regulator HTH, Crp-type, conserved site VA249_02270 IPR012318 Crp-type HTH domain VA249_02270 IPR000595 Cyclic nucleotide-binding domain VA249_02270 IPR018488 Cyclic nucleotide-binding, conserved site VA249_02270 IPR014710 RmlC-like jelly roll fold VA249_02270 IPR018490 Cyclic nucleotide-binding-like VA249_02280 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_02280 IPR006082 Phosphoribulokinase VA249_02280 IPR006083 Phosphoribulokinase/uridine kinase VA249_02290 IPR036685 YehU-like superfamily VA249_02290 IPR010648 Uncharacterised protein family UPF0270 VA249_02300 IPR000073 Alpha/beta hydrolase fold-1 VA249_02300 IPR000952 AB hydrolase 4, conserved site VA249_02300 IPR012020 AB hydrolase 4 family VA249_02300 IPR029058 Alpha/Beta hydrolase fold VA249_02320 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_02320 IPR032781 ABC-transporter extension domain VA249_02320 IPR003439 ABC transporter-like VA249_02320 IPR003593 AAA+ ATPase domain VA249_02320 IPR017871 ABC transporter, conserved site VA249_02330 IPR029039 Flavoprotein-like superfamily VA249_02330 IPR023947 Glutathione-regulated potassium-efflux system ancillary protein KefG VA249_02330 IPR003680 Flavodoxin-like fold VA249_02340 IPR004771 K+/H+ exchanger VA249_02340 IPR020884 Glutathione-regulated potassium-efflux system protein KefB VA249_02340 IPR038770 Sodium/solute symporter superfamily VA249_02340 IPR036291 NAD(P)-binding domain superfamily VA249_02340 IPR003148 Regulator of K+ conductance, N-terminal VA249_02340 IPR006153 Cation/H+ exchanger VA249_02350 IPR038770 Sodium/solute symporter superfamily VA249_02350 IPR003148 Regulator of K+ conductance, N-terminal VA249_02350 IPR036291 NAD(P)-binding domain superfamily VA249_02350 IPR020884 Glutathione-regulated potassium-efflux system protein KefB VA249_02350 IPR004771 K+/H+ exchanger VA249_02350 IPR006153 Cation/H+ exchanger VA249_02370 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain VA249_02380 IPR000246 Peptidase T2, asparaginase 2 VA249_02380 IPR029055 Nucleophile aminohydrolases, N-terminal VA249_02390 IPR007236 SlyX VA249_02410 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily VA249_02410 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal VA249_02410 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain VA249_02420 IPR039446 Transcriptional regulator DauR-like VA249_02420 IPR039445 Transcriptional regulator DauR-like, HTH domain VA249_02420 IPR013559 YheO-like VA249_02430 IPR027396 DsrEFH-like VA249_02430 IPR003787 Sulphur relay, DsrE/F-like protein VA249_02430 IPR017463 Sulphur relay, TusD/DsrE VA249_02440 IPR017462 Sulphur relay, TusC/DsrF VA249_02440 IPR027396 DsrEFH-like VA249_02440 IPR003787 Sulphur relay, DsrE/F-like protein VA249_02450 IPR027396 DsrEFH-like VA249_02450 IPR023526 Sulphur relay, TusB VA249_02450 IPR007215 Sulphur relay, TusB/DsrH VA249_02460 IPR012340 Nucleic acid-binding, OB-fold VA249_02460 IPR006032 Ribosomal protein S12/S23 VA249_02460 IPR005679 Ribosomal protein S12, bacterial-type VA249_02470 IPR000235 Ribosomal protein S5/S7 VA249_02470 IPR020606 Ribosomal protein S7, conserved site VA249_02470 IPR023798 Ribosomal protein S7 domain VA249_02470 IPR005717 Ribosomal protein S7, bacterial/organellar-type VA249_02470 IPR036823 Ribosomal protein S7 domain superfamily VA249_02480 IPR000640 Elongation factor EFG, domain V-like VA249_02480 IPR005517 Translation elongation factor EFG/EF2, domain IV VA249_02480 IPR004540 Translation elongation factor EFG/EF2 VA249_02480 IPR009000 Translation protein, beta-barrel domain superfamily VA249_02480 IPR000795 Transcription factor, GTP-binding domain VA249_02480 IPR005225 Small GTP-binding protein domain VA249_02480 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VA249_02480 IPR004161 Translation elongation factor EFTu-like, domain 2 VA249_02480 IPR035649 EFG, domain V VA249_02480 IPR035647 EF-G domain III/V-like VA249_02480 IPR031157 Tr-type G domain, conserved site VA249_02480 IPR020568 Ribosomal protein S5 domain 2-type fold VA249_02480 IPR009022 Elongation factor G, domain III VA249_02480 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_02480 IPR041095 Elongation Factor G, domain II VA249_02490 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal VA249_02490 IPR005225 Small GTP-binding protein domain VA249_02490 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_02490 IPR009000 Translation protein, beta-barrel domain superfamily VA249_02490 IPR031157 Tr-type G domain, conserved site VA249_02490 IPR000795 Transcription factor, GTP-binding domain VA249_02490 IPR004161 Translation elongation factor EFTu-like, domain 2 VA249_02490 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain VA249_02490 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal VA249_02490 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle VA249_02490 IPR033720 Elongation factor Tu, domain 2 VA249_02500 IPR007419 BFD-like [2Fe-2S]-binding domain VA249_02500 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily VA249_02510 IPR002024 Bacterioferritin VA249_02510 IPR012347 Ferritin-like VA249_02510 IPR009040 Ferritin-like diiron domain VA249_02510 IPR009078 Ferritin-like superfamily VA249_02510 IPR008331 Ferritin/DPS protein domain VA249_02520 IPR037062 Malic enzyme, N-terminal domain superfamily VA249_02520 IPR012302 Malic enzyme, NAD-binding VA249_02520 IPR012301 Malic enzyme, N-terminal domain VA249_02520 IPR015884 Malic enzyme, conserved site VA249_02520 IPR036291 NAD(P)-binding domain superfamily VA249_02520 IPR001891 Malic oxidoreductase VA249_02530 IPR002084 Methionine repressor MetJ VA249_02530 IPR023453 Methionine repressor MetJ domain superfamily VA249_02530 IPR010985 Ribbon-helix-helix VA249_02540 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme VA249_02540 IPR011821 O-succinylhomoserine (thiol)-lyase VA249_02540 IPR015424 Pyridoxal phosphate-dependent transferase VA249_02540 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 VA249_02540 IPR015421 Pyridoxal phosphate-dependent transferase, major domain VA249_02550 IPR036291 NAD(P)-binding domain superfamily VA249_02550 IPR019811 Homoserine dehydrogenase, conserved site VA249_02550 IPR001342 Homoserine dehydrogenase, catalytic VA249_02550 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I VA249_02550 IPR036393 Acetylglutamate kinase-like superfamily VA249_02550 IPR001341 Aspartate kinase VA249_02550 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding VA249_02550 IPR001048 Aspartate/glutamate/uridylate kinase VA249_02550 IPR018042 Aspartate kinase, conserved site VA249_02550 IPR041743 Bifunctional aspartokinase/homoserine dehydrogenase, N-terminal catalytic domain VA249_02560 IPR004620 5,10-methylenetetrahydrofolate reductase VA249_02560 IPR003171 Methylenetetrahydrofolate reductase VA249_02560 IPR029041 FAD-linked oxidoreductase-like VA249_02580 IPR021135 Phosphoenolpyruvate carboxylase VA249_02580 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type VA249_02580 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site VA249_02580 IPR033129 Phosphoenolpyruvate carboxylase, His active site VA249_02580 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily VA249_02590 IPR011650 Peptidase M20, dimerisation domain VA249_02590 IPR036264 Bacterial exopeptidase dimerisation domain VA249_02590 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site VA249_02590 IPR010169 Acetylornithine deacetylase ArgE VA249_02590 IPR002933 Peptidase M20 VA249_02600 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 VA249_02600 IPR036291 NAD(P)-binding domain superfamily VA249_02600 IPR000534 Semialdehyde dehydrogenase, NAD-binding VA249_02600 IPR012280 Semialdehyde dehydrogenase, dimerisation domain VA249_02600 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site VA249_02610 IPR004662 Acetylglutamate kinase family VA249_02610 IPR037528 Acetylglutamate kinase ArgB VA249_02610 IPR001048 Aspartate/glutamate/uridylate kinase VA249_02610 IPR041731 N-Acetyl-L-glutamate kinase, noncyclic VA249_02610 IPR036393 Acetylglutamate kinase-like superfamily VA249_02620 IPR001518 Argininosuccinate synthase VA249_02620 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VA249_02620 IPR018223 Argininosuccinate synthase, conserved site VA249_02620 IPR023434 Argininosuccinate synthase, type 1 subfamily VA249_02620 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body VA249_02630 IPR016181 Acyl-CoA N-acyltransferase VA249_02630 IPR029419 Argininosuccinate lyase, C-terminal VA249_02630 IPR009049 Argininosuccinate lyase VA249_02630 IPR011244 Bifunctional argininosuccinate lyase/acetyltransferase VA249_02630 IPR024083 Fumarase/histidase, N-terminal VA249_02630 IPR000362 Fumarate lyase family VA249_02630 IPR022761 Fumarate lyase, N-terminal VA249_02630 IPR000182 GNAT domain VA249_02630 IPR008948 L-Aspartase-like VA249_02630 IPR020557 Fumarate lyase, conserved site VA249_02640 IPR014025 Glutaredoxin subgroup VA249_02640 IPR011767 Glutaredoxin active site VA249_02640 IPR002109 Glutaredoxin VA249_02640 IPR011906 Glutaredoxin domain VA249_02640 IPR037944 Peroxiredoxin-5-like VA249_02640 IPR036249 Thioredoxin-like superfamily VA249_02640 IPR013740 Redoxin VA249_02650 IPR005119 LysR, substrate-binding VA249_02650 IPR000847 Transcription regulator HTH, LysR VA249_02650 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_02650 IPR036390 Winged helix DNA-binding domain superfamily VA249_02660 IPR001460 Penicillin-binding protein, transpeptidase VA249_02660 IPR031376 Penicillin-binding protein, OB-like domain VA249_02660 IPR036950 Penicillin binding protein transglycosylase domain VA249_02660 IPR023346 Lysozyme-like domain superfamily VA249_02660 IPR012338 Beta-lactamase/transpeptidase-like VA249_02660 IPR001264 Glycosyl transferase, family 51 VA249_02710 IPR004846 Type II/III secretion system VA249_02710 IPR004845 Type II secretion system GspD, conserved site VA249_02710 IPR021731 AMIN domain VA249_02710 IPR001775 GspD/PilQ family VA249_02710 IPR005644 NolW-like VA249_02710 IPR038591 NolW-like superfamily VA249_02710 IPR013355 Type IV pilus secretin PilQ VA249_02710 IPR011662 Secretin/TonB, short N-terminal domain VA249_02720 IPR023000 Shikimate kinase, conserved site VA249_02720 IPR000623 Shikimate kinase/Threonine synthase-like 1 VA249_02720 IPR031322 Shikimate kinase/gluconokinase VA249_02720 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_02730 IPR030963 3-dehydroquinate synthase family VA249_02730 IPR016037 3-dehydroquinate synthase AroB VA249_02730 IPR030960 3-dehydroquinate synthase domain VA249_02750 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VA249_02750 IPR012263 Adenine modification methylase, M.EcoRV-type VA249_02750 IPR002052 DNA methylase, N-6 adenine-specific, conserved site VA249_02750 IPR023095 Adenine-specific methyltransferase, domain 2 VA249_02750 IPR012327 D12 class N6 adenine-specific DNA methyltransferase VA249_02760 IPR013785 Aldolase-type TIM barrel VA249_02760 IPR026019 Ribulose-phosphate 3-epimerase VA249_02760 IPR000056 Ribulose-phosphate 3-epimerase-like VA249_02760 IPR011060 Ribulose-phosphate binding barrel VA249_02770 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 VA249_02770 IPR020815 Ribosomal protein S6, conserved site VA249_02770 IPR020814 Ribosomal protein S6, plastid/chloroplast VA249_02770 IPR000529 Ribosomal protein S6 VA249_02770 IPR035980 Ribosomal protein S6 superfamily VA249_02780 IPR012340 Nucleic acid-binding, OB-fold VA249_02780 IPR000424 Primosome PriB/single-strand DNA-binding VA249_02780 IPR023646 Primosomal replication protein PriB VA249_02790 IPR001648 Ribosomal protein S18 VA249_02790 IPR018275 Ribosomal protein S18, conserved site VA249_02790 IPR036870 Ribosomal protein S18 superfamily VA249_02800 IPR036935 Ribosomal protein L9, N-terminal domain superfamily VA249_02800 IPR020070 Ribosomal protein L9, N-terminal VA249_02800 IPR036791 Ribosomal protein L9, C-terminal domain superfamily VA249_02800 IPR000244 Ribosomal protein L9 VA249_02800 IPR020069 Ribosomal protein L9, C-terminal VA249_02800 IPR020594 Ribosomal protein L9, bacteria/chloroplast VA249_02800 IPR009027 Ribosomal protein L9/RNase H1, N-terminal VA249_02820 IPR007692 DNA helicase, DnaB type VA249_02820 IPR003593 AAA+ ATPase domain VA249_02820 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily VA249_02820 IPR007694 DNA helicase, DnaB-like, C-terminal VA249_02820 IPR007693 DNA helicase, DnaB-like, N-terminal VA249_02820 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal VA249_02820 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_02830 IPR011079 Alanine racemase, C-terminal VA249_02830 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal VA249_02830 IPR000821 Alanine racemase VA249_02830 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site VA249_02830 IPR001608 Alanine racemase, N-terminal VA249_02830 IPR029066 PLP-binding barrel VA249_02850 IPR035917 YjbQ-like superfamily VA249_02850 IPR001602 Uncharacterised protein family UPF0047 VA249_02860 IPR023096 Phosphoglucose isomerase, C-terminal VA249_02860 IPR018189 Phosphoglucose isomerase, conserved site VA249_02860 IPR035476 Phosphoglucose isomerase, SIS domain 1 VA249_02860 IPR001672 Phosphoglucose isomerase (PGI) VA249_02860 IPR035482 Phosphoglucose isomerase, SIS domain 2 VA249_02880 IPR002481 Ferric-uptake regulator VA249_02880 IPR036390 Winged helix DNA-binding domain superfamily VA249_02880 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_02890 IPR013785 Aldolase-type TIM barrel VA249_02890 IPR035587 DUS-like, FMN-binding domain VA249_02890 IPR004653 tRNA-dihydrouridine(20/20a) synthase VA249_02890 IPR001269 tRNA-dihydrouridine synthase VA249_02890 IPR018517 tRNA-dihydrouridine synthase, conserved site VA249_02930 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria VA249_02930 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily VA249_02930 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VA249_02930 IPR029039 Flavoprotein-like superfamily VA249_02930 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase VA249_02930 IPR008254 Flavodoxin/nitric oxide synthase VA249_02930 IPR017938 Riboflavin synthase-like beta-barrel VA249_02930 IPR017927 FAD-binding domain, ferredoxin reductase-type VA249_02930 IPR001433 Oxidoreductase FAD/NAD(P)-binding VA249_02930 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding VA249_02930 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain VA249_02930 IPR001094 Flavodoxin-like VA249_02940 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit VA249_02940 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain VA249_02940 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily VA249_02940 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site VA249_02940 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain VA249_02950 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase VA249_02950 IPR002500 Phosphoadenosine phosphosulphate reductase VA249_02950 IPR011800 Phosphoadenosine phosphosulphate reductase CysH VA249_02950 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VA249_02960 IPR038717 Tc1-like transposase, DDE domain VA249_02980 IPR006153 Cation/H+ exchanger VA249_02980 IPR018422 Cation/H+ exchanger, CPA1 family VA249_02980 IPR038770 Sodium/solute symporter superfamily VA249_02990 IPR036594 Methionine synthase domain VA249_02990 IPR003726 Homocysteine-binding domain VA249_02990 IPR011005 Dihydropteroate synthase-like VA249_02990 IPR036724 Cobalamin-binding domain superfamily VA249_02990 IPR036589 Homocysteine-binding domain superfamily VA249_02990 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain VA249_02990 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily VA249_02990 IPR011822 Cobalamin-dependent methionine synthase VA249_02990 IPR006158 Cobalamin (vitamin B12)-binding domain VA249_02990 IPR033706 Methionine synthase, B12-binding domain VA249_02990 IPR004223 Vitamin B12-dependent methionine synthase, activation domain VA249_02990 IPR000489 Pterin-binding domain VA249_03000 IPR001048 Aspartate/glutamate/uridylate kinase VA249_03000 IPR036393 Acetylglutamate kinase-like superfamily VA249_03000 IPR002912 ACT domain VA249_03000 IPR041745 Lysine-sensitive aspartokinase 3, N-terminal catalytic domain VA249_03000 IPR018042 Aspartate kinase, conserved site VA249_03000 IPR001341 Aspartate kinase VA249_03000 IPR005260 Aspartate kinase, monofunctional class VA249_03010 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site VA249_03010 IPR015424 Pyridoxal phosphate-dependent transferase VA249_03010 IPR015421 Pyridoxal phosphate-dependent transferase, major domain VA249_03010 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase VA249_03010 IPR000192 Aminotransferase class V domain VA249_03010 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 VA249_03030 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_03030 IPR004602 UvrABC system subunit A VA249_03030 IPR041552 UvrA DNA-binding domain VA249_03030 IPR041102 UvrA, interaction domain VA249_03030 IPR017871 ABC transporter, conserved site VA249_03030 IPR003439 ABC transporter-like VA249_03040 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type VA249_03040 IPR005835 Nucleotidyl transferase domain VA249_03040 IPR029044 Nucleotide-diphospho-sugar transferases VA249_03050 IPR016032 Signal transduction response regulator, C-terminal effector VA249_03050 IPR000792 Transcription regulator LuxR, C-terminal VA249_03050 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_03060 IPR011344 Single-stranded DNA-binding protein VA249_03060 IPR012340 Nucleic acid-binding, OB-fold VA249_03060 IPR000424 Primosome PriB/single-strand DNA-binding VA249_03070 IPR001633 EAL domain VA249_03070 IPR029787 Nucleotide cyclase VA249_03070 IPR035919 EAL domain superfamily VA249_03070 IPR000160 GGDEF domain VA249_03070 IPR033423 Gammaproteobacterial periplasmic sensor domain GAPES4 VA249_03110 IPR004846 Type II/III secretion system VA249_03110 IPR001775 GspD/PilQ family VA249_03110 IPR013356 Type II secretion system GspD VA249_03110 IPR038591 NolW-like superfamily VA249_03110 IPR005644 NolW-like VA249_03110 IPR004845 Type II secretion system GspD, conserved site VA249_03120 IPR003593 AAA+ ATPase domain VA249_03120 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_03120 IPR002477 Peptidoglycan binding-like VA249_03120 IPR036365 PGBD-like superfamily VA249_03120 IPR036366 PGBD superfamily VA249_03140 IPR013374 ATPase, type IV, pilus assembly, PilB VA249_03140 IPR003593 AAA+ ATPase domain VA249_03140 IPR042181 Type II secretion system, protein E, N-terminal VA249_03140 IPR001482 Type II/IV secretion system protein VA249_03140 IPR037257 General secretory system II, protein E, N-terminal superfamily VA249_03140 IPR007831 General secretory system II, protein E, N-terminal VA249_03140 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_03160 IPR018076 Type II secretion system F domain VA249_03160 IPR042094 Type II secretion system F domain superfamily VA249_03160 IPR003004 GspF/PilC family VA249_03180 IPR012902 Prokaryotic N-terminal methylation site VA249_03180 IPR001082 Fimbrial protein pilin VA249_03250 IPR004753 Cell shape determining protein MreB VA249_03260 IPR042175 Cell/Rod shape-determining protein MreC, domain 2 VA249_03260 IPR042177 Cell/Rod shape-determining protein MreC, domain 1 VA249_03260 IPR007221 Rod shape-determining protein MreC VA249_03270 IPR007227 Cell shape-determining protein MreD VA249_03270 IPR026034 Cell shape-determining protein MreD, proteobacterial type VA249_03280 IPR029001 Inosine triphosphate pyrophosphatase-like VA249_03280 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein VA249_03290 IPR004659 Ribonuclease E/G VA249_03290 IPR012340 Nucleic acid-binding, OB-fold VA249_03290 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G VA249_03290 IPR022967 RNA-binding domain, S1 VA249_03290 IPR003029 S1 domain VA249_03300 IPR011836 Conserved hypothetical protein CHP02099 VA249_03300 IPR032712 AsmA-like, C-terminal VA249_03300 IPR025263 Domain of unknown function DUF3971 VA249_03310 IPR001110 Uncharacterised protein family UPF0012, conserved site VA249_03310 IPR003010 Carbon-nitrogen hydrolase VA249_03310 IPR036526 Carbon-nitrogen hydrolase superfamily VA249_03320 IPR036059 Metalloprotease TldD/PmbA superfamily VA249_03320 IPR035068 Metalloprotease TldD/PmbA, N-terminal VA249_03320 IPR002510 Metalloprotease TldD/PmbA VA249_03320 IPR025502 TldD VA249_03330 IPR002716 PIN domain VA249_03330 IPR029060 PIN-like domain superfamily VA249_03330 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_03330 IPR003714 PhoH-like protein VA249_03340 IPR040765 RapA, N-terminal Tudor like domain 1 VA249_03340 IPR040766 RapA, N-terminal Tudor-like domain 2 VA249_03340 IPR038718 SNF2-like, N-terminal domain superfamily VA249_03340 IPR022737 RNA polymerase recycling, bacterial, C-terminal VA249_03340 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_03340 IPR023949 RNA polymerase-associated protein RapA VA249_03340 IPR014001 Helicase superfamily 1/2, ATP-binding domain VA249_03340 IPR001650 Helicase, C-terminal VA249_03340 IPR000330 SNF2-related, N-terminal domain VA249_03350 IPR006145 Pseudouridine synthase, RsuA/RluA VA249_03350 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site VA249_03350 IPR006225 Pseudouridine synthase, RluC/RluD VA249_03350 IPR020103 Pseudouridine synthase, catalytic domain superfamily VA249_03360 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VA249_03360 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VA249_03360 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain VA249_03360 IPR036291 NAD(P)-binding domain superfamily VA249_03370 IPR023153 PSPTO4464-like domain superfamily VA249_03370 IPR006839 Ribosome-associated, YjgA VA249_03380 IPR002510 Metalloprotease TldD/PmbA VA249_03380 IPR036059 Metalloprotease TldD/PmbA superfamily VA249_03380 IPR035068 Metalloprotease TldD/PmbA, N-terminal VA249_03390 IPR000644 CBS domain VA249_03390 IPR006667 SLC41 divalent cation transporters, integral membrane domain VA249_03390 IPR006669 Magnesium transporter MgtE VA249_03390 IPR038048 Magnesium transporter MgtE, transmembrane domain VA249_03390 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily VA249_03390 IPR038076 MgtE, N-terminal domain superfamily VA249_03390 IPR006668 Magnesium transporter, MgtE intracellular domain VA249_03400 IPR035895 HPr-like superfamily VA249_03400 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site VA249_03400 IPR000032 Phosphocarrier protein HPr-like VA249_03400 IPR002114 Phosphotransferase system, HPr serine phosphorylation site VA249_03410 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_03410 IPR005337 RapZ-like family VA249_03420 IPR016152 Phosphotransferase/anion transporter VA249_03420 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN VA249_03420 IPR002178 PTS EIIA type-2 domain VA249_03430 IPR036567 Ribosome hibernation promotion factor-like VA249_03430 IPR003489 Ribosome hibernation promoting factor/RaiA VA249_03440 IPR007046 RNA polymerase sigma factor 54, core-binding domain VA249_03440 IPR007634 RNA polymerase sigma factor 54, DNA-binding VA249_03440 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily VA249_03440 IPR000394 RNA polymerase sigma factor 54 VA249_03450 IPR003593 AAA+ ATPase domain VA249_03450 IPR003439 ABC transporter-like VA249_03450 IPR017871 ABC transporter, conserved site VA249_03450 IPR030921 LPS export ABC transporter, ATP-binding protein LptB VA249_03450 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_03450 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal VA249_03460 IPR014340 Lipopolysaccharide export system protein LptA VA249_03460 IPR005653 Organic solvent tolerance-like, N-terminal VA249_03480 IPR001347 Sugar isomerase (SIS) VA249_03480 IPR000644 CBS domain VA249_03480 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type VA249_03480 IPR035474 KpsF-like, SIS domain VA249_03490 IPR004481 Sodium/potassium/calcium exchanger VA249_03490 IPR004837 Sodium/calcium exchanger membrane region VA249_03500 IPR003593 AAA+ ATPase domain VA249_03500 IPR003439 ABC transporter-like VA249_03500 IPR017871 ABC transporter, conserved site VA249_03500 IPR030296 Probable ABC transporter ATP-binding protein MlaF/Mkl VA249_03500 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_03510 IPR003453 ABC transport permease subunit MlaE, Proteobacteria VA249_03510 IPR030802 ABC transporter permease MalE VA249_03520 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD VA249_03520 IPR003399 Mce/MlaD VA249_03530 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC VA249_03530 IPR042245 Tgt2/MlaC superfamily VA249_03550 IPR002634 BolA protein VA249_03550 IPR036065 BolA-like superfamily VA249_03560 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase VA249_03560 IPR036968 Enolpyruvate transferase domain superfamily VA249_03560 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta VA249_03560 IPR001986 Enolpyruvate transferase domain VA249_03570 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase VA249_03570 IPR002123 Phospholipid/glycerol acyltransferase VA249_03580 IPR006175 YjgF/YER057c/UK114 family VA249_03580 IPR035959 RutC-like superfamily VA249_03580 IPR006056 RidA family VA249_03580 IPR019897 RidA, conserved site VA249_03590 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal VA249_03590 IPR002801 Aspartate transcarbamylase regulatory subunit VA249_03590 IPR036792 Aspartate carbamoyltransferase regulatory subunit, C-terminal domain superfamily VA249_03590 IPR036793 Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily VA249_03590 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal VA249_03600 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding VA249_03600 IPR006130 Aspartate/ornithine carbamoyltransferase VA249_03600 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily VA249_03600 IPR002082 Aspartate carbamoyltransferase VA249_03600 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain VA249_03610 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding VA249_03610 IPR024904 Ornithine carbamoyltransferase VA249_03610 IPR002292 Ornithine/putrescine carbamoyltransferase VA249_03610 IPR006130 Aspartate/ornithine carbamoyltransferase VA249_03610 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily VA249_03610 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain VA249_03620 IPR003876 Arginine deiminase VA249_03630 IPR009671 Regulator of ribonuclease activity B domain VA249_03630 IPR016716 Regulator of ribonuclease activity B VA249_03630 IPR036701 RraB-like superfamily VA249_03650 IPR000182 GNAT domain VA249_03650 IPR016181 Acyl-CoA N-acyltransferase VA249_03670 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site VA249_03670 IPR002303 Valine-tRNA ligase VA249_03670 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm VA249_03670 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm VA249_03670 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VA249_03670 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding VA249_03670 IPR002300 Aminoacyl-tRNA synthetase, class Ia VA249_03670 IPR033705 Valyl tRNA synthetase, anticodon-binding domain VA249_03670 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding VA249_03670 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily VA249_03670 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain VA249_03680 IPR007459 DNA polymerase III chi subunit, HolC VA249_03680 IPR036768 DNA polymerase III subunit chi superfamily VA249_03690 IPR023042 Peptidase M17, leucine aminopeptidase VA249_03690 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B VA249_03690 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal VA249_03690 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal VA249_03700 IPR030922 LPS export ABC transporter permease LptF VA249_03700 IPR005495 Permease LptG/LptF-related VA249_03710 IPR030923 LPS export ABC transporter permease LptG VA249_03710 IPR005495 Permease LptG/LptF-related VA249_03750 IPR001110 Uncharacterised protein family UPF0012, conserved site VA249_03750 IPR003010 Carbon-nitrogen hydrolase VA249_03750 IPR036526 Carbon-nitrogen hydrolase superfamily VA249_03750 IPR016181 Acyl-CoA N-acyltransferase VA249_03750 IPR000182 GNAT domain VA249_03760 IPR011006 CheY-like superfamily VA249_03760 IPR003607 HD/PDEase domain VA249_03760 IPR001789 Signal transduction response regulator, receiver domain VA249_03760 IPR037522 HD-GYP domain VA249_03770 IPR016161 Aldehyde/histidinol dehydrogenase VA249_03770 IPR016163 Aldehyde dehydrogenase, C-terminal VA249_03770 IPR016160 Aldehyde dehydrogenase, cysteine active site VA249_03770 IPR029510 Aldehyde dehydrogenase, glutamic acid active site VA249_03770 IPR016162 Aldehyde dehydrogenase, N-terminal VA249_03770 IPR015590 Aldehyde dehydrogenase domain VA249_03770 IPR010102 Succinate semialdehyde dehydrogenase VA249_03780 IPR003660 HAMP domain VA249_03780 IPR033480 Single Cache domain 2 VA249_03780 IPR000727 Target SNARE coiled-coil homology domain VA249_03780 IPR004090 Chemotaxis methyl-accepting receptor VA249_03780 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VA249_03790 IPR023346 Lysozyme-like domain superfamily VA249_03790 IPR023664 Murein transglycosylase-C VA249_03790 IPR024570 Murein transglycosylase-C, N-terminal VA249_03790 IPR000189 Prokaryotic transglycosylase, active site VA249_03790 IPR008258 Transglycosylase SLT domain 1 VA249_03800 IPR007457 Fe(II) trafficking protein YggX VA249_03800 IPR036766 Fe(II) trafficking protein YggX superfamily VA249_03810 IPR003265 HhH-GPD domain VA249_03810 IPR029119 MutY, C-terminal VA249_03810 IPR015797 NUDIX hydrolase-like domain superfamily VA249_03810 IPR000445 Helix-hairpin-helix motif VA249_03810 IPR005760 A/G-specific adenine glycosylase MutY VA249_03810 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal VA249_03810 IPR004036 Endonuclease III-like, conserved site-2 VA249_03810 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif VA249_03810 IPR004035 Endonuclease III, iron-sulphur binding site VA249_03810 IPR011257 DNA glycosylase VA249_03820 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VA249_03820 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type VA249_03830 IPR017985 DNA methylase, N-4 cytosine-specific, conserved site VA249_03830 IPR012327 D12 class N6 adenine-specific DNA methyltransferase VA249_03830 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VA249_03840 IPR015868 Glutaminase VA249_03840 IPR012338 Beta-lactamase/transpeptidase-like VA249_03850 IPR010723 HemN, C-terminal VA249_03850 IPR004559 Heme chaperone HemW-like VA249_03850 IPR007197 Radical SAM VA249_03850 IPR023404 Radical SAM, alpha/beta horseshoe VA249_03850 IPR034505 Anaerobic coproporphyrinogen-III oxidase VA249_03850 IPR006638 Elp3/MiaB/NifB VA249_03860 IPR020922 dITP/XTP pyrophosphatase VA249_03860 IPR002637 Ham1-like protein VA249_03860 IPR029001 Inosine triphosphate pyrophosphatase-like VA249_03880 IPR003746 Protein of unknown function DUF167 VA249_03880 IPR005228 Conserved hypothetical protein CHP00251 VA249_03880 IPR036591 YggU-like superfamily VA249_03890 IPR003425 CCB3/YggT VA249_03900 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily VA249_03900 IPR000304 Pyrroline-5-carboxylate reductase VA249_03900 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal VA249_03900 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain VA249_03900 IPR036291 NAD(P)-binding domain superfamily VA249_03910 IPR001608 Alanine racemase, N-terminal VA249_03910 IPR029066 PLP-binding barrel VA249_03910 IPR011078 Pyridoxal phosphate homeostasis protein VA249_03920 IPR001482 Type II/IV secretion system protein VA249_03920 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_03920 IPR003593 AAA+ ATPase domain VA249_03920 IPR006321 Pilus retraction protein PilT VA249_03930 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_03930 IPR001482 Type II/IV secretion system protein VA249_03930 IPR006321 Pilus retraction protein PilT VA249_03940 IPR012337 Ribonuclease H-like superfamily VA249_03940 IPR005227 Putative pre-16S rRNA nuclease VA249_03940 IPR006641 YqgF/RNase H-like domain VA249_03940 IPR037027 YqgF/RNase H-like domain superfamily VA249_03950 IPR003774 Protein of unknown function UPF0301 VA249_03960 IPR004218 Prokaryotic glutathione synthetase, ATP-binding VA249_03960 IPR013815 ATP-grasp fold, subdomain 1 VA249_03960 IPR016185 Pre-ATP-grasp domain superfamily VA249_03960 IPR004215 Prokaryotic glutathione synthetase, N-terminal VA249_03960 IPR006284 Glutathione synthetase, prokaryotic VA249_03960 IPR011761 ATP-grasp fold VA249_03970 IPR015947 PUA-like superfamily VA249_03970 IPR029028 Alpha/beta knot methyltransferases VA249_03970 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VA249_03970 IPR006700 Ribosomal RNA small subunit methyltransferase E VA249_03980 IPR007346 Endonuclease I VA249_03990 IPR006640 SprT-like VA249_03990 IPR035240 SprT-like, zinc ribbon domain VA249_03990 IPR023483 Uncharacterised protein family SprT VA249_04010 IPR022631 S-adenosylmethionine synthetase, conserved site VA249_04010 IPR022630 S-adenosylmethionine synthetase, C-terminal VA249_04010 IPR022629 S-adenosylmethionine synthetase, central domain VA249_04010 IPR022628 S-adenosylmethionine synthetase, N-terminal VA249_04010 IPR002133 S-adenosylmethionine synthetase VA249_04010 IPR022636 S-adenosylmethionine synthetase superfamily VA249_04020 IPR005474 Transketolase, N-terminal VA249_04020 IPR033247 Transketolase family VA249_04020 IPR033248 Transketolase, C-terminal domain VA249_04020 IPR005475 Transketolase-like, pyrimidine-binding domain VA249_04020 IPR005478 Transketolase, bacterial-like VA249_04020 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II VA249_04020 IPR020826 Transketolase binding site VA249_04020 IPR029061 Thiamin diphosphate-binding fold VA249_04040 IPR006422 D-erythrose-4-phosphate dehydrogenase VA249_04040 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family VA249_04040 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain VA249_04040 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain VA249_04040 IPR036291 NAD(P)-binding domain superfamily VA249_04050 IPR036043 Phosphoglycerate kinase superfamily VA249_04050 IPR015911 Phosphoglycerate kinase, conserved site VA249_04050 IPR001576 Phosphoglycerate kinase VA249_04050 IPR015824 Phosphoglycerate kinase, N-terminal VA249_04060 IPR013785 Aldolase-type TIM barrel VA249_04060 IPR000771 Fructose-bisphosphate aldolase, class-II VA249_04060 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype VA249_04080 IPR008910 Conserved TM helix VA249_04080 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 VA249_04080 IPR023408 Mechanosensitive ion channel MscS domain superfamily VA249_04080 IPR011066 Mechanosensitive ion channel MscS, C-terminal VA249_04080 IPR006685 Mechanosensitive ion channel MscS VA249_04080 IPR006686 Mechanosensitive ion channel MscS, conserved site VA249_04080 IPR010920 LSM domain superfamily VA249_04100 IPR023445 Arginine exporter protein ArgO, enterobacteria VA249_04100 IPR001123 Amino acid exporter protein, LeuE-type VA249_04100 IPR004777 L-lysine exporter/arginine exporter VA249_04110 IPR036390 Winged helix DNA-binding domain superfamily VA249_04110 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_04110 IPR005119 LysR, substrate-binding VA249_04110 IPR023490 HTH-type transcriptional regulator ArgP, Gammaproteobacteria VA249_04110 IPR000847 Transcription regulator HTH, LysR VA249_04110 IPR017685 HTH-type transcriptional regulator ArgP VA249_04120 IPR007497 Protein of unknown function DUF541 VA249_04130 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain VA249_04130 IPR036291 NAD(P)-binding domain superfamily VA249_04130 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VA249_04130 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VA249_04130 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 VA249_04130 IPR002912 ACT domain VA249_04140 IPR037171 NagB/RpiA transferase-like VA249_04140 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup VA249_04140 IPR004788 Ribose 5-phosphate isomerase, type A VA249_04150 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily VA249_04150 IPR002698 5-formyltetrahydrofolate cyclo-ligase VA249_04150 IPR037171 NagB/RpiA transferase-like VA249_04160 IPR007838 Cell division protein ZapA-like VA249_04160 IPR023771 Cell division protein ZapA, eubacteria VA249_04160 IPR036192 Cell division protein ZapA-like superfamily VA249_04170 IPR011978 Uncharacterised protein family UPF0149 VA249_04170 IPR036255 YgfB-like superfamily VA249_04180 IPR036188 FAD/NAD(P)-binding domain superfamily VA249_04180 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site VA249_04180 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase VA249_04180 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 VA249_04180 IPR002938 FAD-binding domain VA249_04190 IPR002938 FAD-binding domain VA249_04190 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 VA249_04190 IPR036188 FAD/NAD(P)-binding domain superfamily VA249_04190 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site VA249_04220 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal VA249_04220 IPR023758 tRNA-modifying protein YgfZ VA249_04220 IPR017703 YgfZ/GcvT conserved site VA249_04230 IPR005631 Flavinator of succinate dehydrogenase VA249_04230 IPR036714 Flavinator of succinate dehydrogenase superfamily VA249_04240 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain VA249_04240 IPR036188 FAD/NAD(P)-binding domain superfamily VA249_04240 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily VA249_04240 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal VA249_04240 IPR005288 L-aspartate oxidase VA249_04240 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily VA249_04250 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_04250 IPR013324 RNA polymerase sigma factor, region 3/4-like VA249_04250 IPR013325 RNA polymerase sigma factor, region 2 VA249_04250 IPR014286 RNA polymerase sigma-70 RpoE type VA249_04250 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site VA249_04250 IPR007627 RNA polymerase sigma-70 region 2 VA249_04250 IPR039425 RNA polymerase sigma-70 like VA249_04250 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 VA249_04250 IPR014284 RNA polymerase sigma-70 like domain VA249_04260 IPR005573 Anti sigma-E protein RseA, C-terminal VA249_04260 IPR005572 Anti sigma-E protein RseA, N-terminal VA249_04260 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily VA249_04260 IPR026279 Sigma-E factor negative regulatory protein RseA VA249_04270 IPR005588 MucB/RseB VA249_04270 IPR033436 MucB/RseB, C-terminal VA249_04270 IPR033434 MucB/RseB, N-terminal VA249_04270 IPR038484 MucB/RseB, C-terminal domain superfamily VA249_04280 IPR007359 Positive regulator of sigma(E), RseC/MucC VA249_04280 IPR026268 Protein RseC VA249_04290 IPR035647 EF-G domain III/V-like VA249_04290 IPR000640 Elongation factor EFG, domain V-like VA249_04290 IPR009000 Translation protein, beta-barrel domain superfamily VA249_04290 IPR000795 Transcription factor, GTP-binding domain VA249_04290 IPR005225 Small GTP-binding protein domain VA249_04290 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_04290 IPR006297 Elongation factor 4 VA249_04290 IPR013842 GTP-binding protein LepA, C-terminal VA249_04290 IPR038363 LepA, C-terminal domain superfamily VA249_04290 IPR031157 Tr-type G domain, conserved site VA249_04290 IPR035654 Elongation factor 4, domain IV VA249_04290 IPR004161 Translation elongation factor EFTu-like, domain 2 VA249_04300 IPR019756 Peptidase S26A, signal peptidase I, serine active site VA249_04300 IPR019533 Peptidase S26 VA249_04300 IPR019758 Peptidase S26A, signal peptidase I, conserved site VA249_04300 IPR000223 Peptidase S26A, signal peptidase I VA249_04300 IPR019757 Peptidase S26A, signal peptidase I, lysine active site VA249_04300 IPR036286 LexA/Signal peptidase-like superfamily VA249_04310 IPR036389 Ribonuclease III, endonuclease domain superfamily VA249_04310 IPR011907 Ribonuclease III VA249_04310 IPR014720 Double-stranded RNA-binding domain VA249_04310 IPR000999 Ribonuclease III domain VA249_04320 IPR030388 Era-type guanine nucleotide-binding (G) domain VA249_04320 IPR005662 GTP-binding protein Era VA249_04320 IPR006073 GTP binding domain VA249_04320 IPR004044 K Homology domain, type 2 VA249_04320 IPR009019 K homology domain superfamily, prokaryotic type VA249_04320 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_04320 IPR005225 Small GTP-binding protein domain VA249_04320 IPR015946 K homology domain-like, alpha/beta VA249_04330 IPR022572 DNA replication/recombination mediator RecO, N-terminal VA249_04330 IPR012340 Nucleic acid-binding, OB-fold VA249_04330 IPR003717 Recombination protein O, RecO VA249_04330 IPR037278 ARFGAP/RecO-like zinc finger VA249_04340 IPR013785 Aldolase-type TIM barrel VA249_04340 IPR036130 Pyridoxine 5'-phosphate synthase VA249_04340 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ VA249_04350 IPR008278 4'-phosphopantetheinyl transferase domain VA249_04350 IPR037143 4'-phosphopantetheinyl transferase domain superfamily VA249_04350 IPR002582 Holo-[acyl carrier protein] synthase VA249_04350 IPR004568 Phosphopantetheine-protein transferase domain VA249_04360 IPR003660 HAMP domain VA249_04360 IPR011006 CheY-like superfamily VA249_04360 IPR001789 Signal transduction response regulator, receiver domain VA249_04360 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VA249_04360 IPR036641 HPT domain superfamily VA249_04360 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain VA249_04360 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily VA249_04360 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain VA249_04360 IPR005467 Histidine kinase domain VA249_04360 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VA249_04360 IPR003594 Histidine kinase/HSP90-like ATPase VA249_04360 IPR019247 Histidine kinase BarA, N-terminal VA249_04370 IPR030390 RNA methyltransferase TrmA, active site VA249_04370 IPR030391 RNA methyltransferase TrmA, conserved site VA249_04370 IPR012340 Nucleic acid-binding, OB-fold VA249_04370 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VA249_04370 IPR002792 TRAM domain VA249_04370 IPR010280 (Uracil-5)-methyltransferase family VA249_04370 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD VA249_04380 IPR002912 ACT domain VA249_04380 IPR012675 Beta-grasp domain superfamily VA249_04380 IPR003607 HD/PDEase domain VA249_04380 IPR004811 RelA/SpoT family VA249_04380 IPR012676 TGS-like VA249_04380 IPR004095 TGS VA249_04380 IPR007685 RelA/SpoT VA249_04380 IPR033655 RelA, TGS domain VA249_04390 IPR011551 NTP pyrophosphohydrolase MazG VA249_04390 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core VA249_04400 IPR029062 Class I glutamine amidotransferase-like VA249_04400 IPR004468 CTP synthase VA249_04400 IPR017456 CTP synthase, N-terminal VA249_04400 IPR017926 Glutamine amidotransferase VA249_04400 IPR033828 CTP synthase GATase domain VA249_04400 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_04410 IPR020811 Enolase, N-terminal VA249_04410 IPR020809 Enolase, conserved site VA249_04410 IPR036849 Enolase-like, C-terminal domain superfamily VA249_04410 IPR000941 Enolase VA249_04410 IPR029017 Enolase-like, N-terminal VA249_04410 IPR020810 Enolase, C-terminal TIM barrel domain VA249_04420 IPR023081 Cell division protein FtsB VA249_04420 IPR007060 Septum formation initiator FtsL/DivIC VA249_04430 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase VA249_04430 IPR034683 Cytidylyltransferase IspD/TarI VA249_04430 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site VA249_04430 IPR029044 Nucleotide-diphospho-sugar transferases VA249_04440 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase VA249_04440 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site VA249_04440 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily VA249_04450 IPR020119 Pseudouridine synthase TruD, conserved site VA249_04450 IPR001656 Pseudouridine synthase, TruD VA249_04450 IPR020103 Pseudouridine synthase, catalytic domain superfamily VA249_04450 IPR011760 Pseudouridine synthase, TruD, insertion domain VA249_04450 IPR042214 Pseudouridine synthase, TruD, catalytic domain VA249_04460 IPR030048 Survival protein SurE VA249_04460 IPR002828 Survival protein SurE-like phosphatase/nucleotidase VA249_04460 IPR036523 SurE-like phosphatase/nucleotidase superfamily VA249_04470 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VA249_04470 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase VA249_04480 IPR011055 Duplicated hybrid motif VA249_04480 IPR018392 LysM domain VA249_04480 IPR016047 Peptidase M23 VA249_04480 IPR036779 LysM domain superfamily VA249_04490 IPR014284 RNA polymerase sigma-70 like domain VA249_04490 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_04490 IPR013324 RNA polymerase sigma factor, region 3/4-like VA249_04490 IPR013325 RNA polymerase sigma factor, region 2 VA249_04490 IPR012761 RNA polymerase sigma factor RpoS VA249_04490 IPR007624 RNA polymerase sigma-70 region 3 VA249_04490 IPR007627 RNA polymerase sigma-70 region 2 VA249_04490 IPR009042 RNA polymerase sigma-70 region 1.2 VA249_04490 IPR000943 RNA polymerase sigma-70 VA249_04490 IPR007630 RNA polymerase sigma-70 region 4 VA249_04500 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_04500 IPR036678 MutS, connector domain superfamily VA249_04500 IPR007860 DNA mismatch repair protein MutS, connector domain VA249_04500 IPR036187 DNA mismatch repair protein MutS, core domain superfamily VA249_04500 IPR007696 DNA mismatch repair protein MutS, core VA249_04500 IPR007861 DNA mismatch repair protein MutS, clamp VA249_04500 IPR000432 DNA mismatch repair protein MutS, C-terminal VA249_04500 IPR017261 DNA mismatch repair protein MutS/MSH VA249_04500 IPR005748 DNA mismatch repair protein MutS VA249_04500 IPR016151 DNA mismatch repair protein MutS, N-terminal VA249_04500 IPR007695 DNA mismatch repair protein MutS-like, N-terminal VA249_04510 IPR036653 CinA-like, C-terminal VA249_04510 IPR008136 CinA, C-terminal VA249_04520 IPR003593 AAA+ ATPase domain VA249_04520 IPR013765 DNA recombination and repair protein RecA VA249_04520 IPR020587 DNA recombination and repair protein RecA, monomer-monomer interface VA249_04520 IPR020584 DNA recombination/repair protein RecA, conserved site VA249_04520 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain VA249_04520 IPR023400 DNA recombination and repair protein RecA, C-terminal VA249_04520 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_04530 IPR003783 Regulatory protein RecX VA249_04530 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_04540 IPR009000 Translation protein, beta-barrel domain superfamily VA249_04540 IPR003156 DHHA1 domain VA249_04540 IPR012947 Threonyl/alanyl tRNA synthetase, SAD VA249_04540 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal VA249_04540 IPR018165 Alanyl-tRNA synthetase, class IIc, core domain VA249_04540 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily VA249_04540 IPR002318 Alanine-tRNA ligase, class IIc VA249_04540 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria VA249_04540 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily VA249_04550 IPR036393 Acetylglutamate kinase-like superfamily VA249_04550 IPR002912 ACT domain VA249_04550 IPR041740 Aspartokinase catalytic domain VA249_04550 IPR001048 Aspartate/glutamate/uridylate kinase VA249_04550 IPR005260 Aspartate kinase, monofunctional class VA249_04550 IPR001341 Aspartate kinase VA249_04550 IPR018042 Aspartate kinase, conserved site VA249_04550 IPR027795 CASTOR, ACT domain VA249_04560 IPR003751 Translational regulator CsrA VA249_04560 IPR036107 Carbon storage regulator superfamily VA249_04620 IPR016032 Signal transduction response regulator, C-terminal effector VA249_04620 IPR000792 Transcription regulator LuxR, C-terminal VA249_04620 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_04630 IPR023424 Oxaloacetate decarboxylase gamma chain, probable VA249_04630 IPR005899 Sodium ion-translocating decarboxylase VA249_04640 IPR013785 Aldolase-type TIM barrel VA249_04640 IPR000891 Pyruvate carboxyltransferase VA249_04640 IPR000089 Biotin/lipoyl attachment VA249_04640 IPR001882 Biotin-binding site VA249_04640 IPR003379 Carboxylase, conserved domain VA249_04640 IPR005776 Oxaloacetate decarboxylase, alpha subunit VA249_04640 IPR011053 Single hybrid motif VA249_04650 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit VA249_04660 IPR013154 Alcohol dehydrogenase, N-terminal VA249_04660 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site VA249_04660 IPR011032 GroES-like superfamily VA249_04660 IPR036291 NAD(P)-binding domain superfamily VA249_04660 IPR020843 Polyketide synthase, enoylreductase domain VA249_04660 IPR013149 Alcohol dehydrogenase, C-terminal VA249_04670 IPR032816 SNARE associated Golgi protein VA249_04680 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like VA249_04680 IPR011765 Peptidase M16, N-terminal VA249_04680 IPR001431 Peptidase M16, zinc-binding site VA249_04680 IPR007863 Peptidase M16, C-terminal VA249_04690 IPR006334 Glutamate--cysteine ligase, monofunctional VA249_04690 IPR007370 Glutamate--cysteine ligase VA249_04690 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain VA249_04710 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like VA249_04710 IPR003815 S-ribosylhomocysteinase (LuxS) VA249_04710 IPR037005 S-ribosylhomocysteinase (LuxS) superfamily VA249_04720 IPR000644 CBS domain VA249_04720 IPR002550 CNNM, transmembrane domain VA249_04720 IPR036318 FAD-binding, type PCMH-like superfamily VA249_04720 IPR016169 FAD-binding, type PCMH, subdomain 2 VA249_04720 IPR005170 Transporter-associated domain VA249_04730 IPR002541 Cytochrome c assembly protein VA249_04740 IPR003593 AAA+ ATPase domain VA249_04740 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_04740 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily VA249_04740 IPR013822 Signal recognition particle SRP54, helical bundle VA249_04740 IPR004125 Signal recognition particle, SRP54 subunit, M-domain VA249_04740 IPR004780 Signal recognition particle protein VA249_04740 IPR022941 Signal recognition particle, SRP54 subunit VA249_04740 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily VA249_04740 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain VA249_04750 IPR020592 Ribosomal protein S16, conserved site VA249_04750 IPR023803 Ribosomal protein S16 domain superfamily VA249_04750 IPR000307 Ribosomal protein S16 VA249_04760 IPR011961 16S rRNA processing protein RimM VA249_04760 IPR027275 PRC-barrel domain VA249_04760 IPR011033 PRC-barrel-like superfamily VA249_04760 IPR002676 RimM, N-terminal VA249_04760 IPR009000 Translation protein, beta-barrel domain superfamily VA249_04760 IPR036976 RimM, N-terminal domain superfamily VA249_04770 IPR029028 Alpha/beta knot methyltransferases VA249_04770 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria VA249_04770 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal VA249_04770 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VA249_04770 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain VA249_04780 IPR008991 Translation protein SH3-like domain superfamily VA249_04780 IPR001857 Ribosomal protein L19 VA249_04780 IPR038657 Ribosomal protein L19 superfamily VA249_04780 IPR018257 Ribosomal protein L19, conserved site VA249_04790 IPR005584 DNA gyrase inhibitor YacG VA249_04790 IPR013088 Zinc finger, NHR/GATA-type VA249_04800 IPR009777 Cell division protein ZapD VA249_04800 IPR027462 Z ring-associated protein D, C-terminal VA249_04800 IPR036268 ZapD domain superfamily VA249_04810 IPR001977 Dephospho-CoA kinase VA249_04810 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_04820 IPR010627 Peptidase A24A, N-terminal VA249_04820 IPR014032 Peptidase A24A, prepilin type IV, bacterial VA249_04820 IPR000045 Prepilin type IV endopeptidase, peptidase domain VA249_04830 IPR001992 Type II secretion system conserved site VA249_04830 IPR018076 Type II secretion system F domain VA249_04830 IPR042094 Type II secretion system F domain superfamily VA249_04830 IPR003004 GspF/PilC family VA249_04840 IPR013374 ATPase, type IV, pilus assembly, PilB VA249_04840 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_04840 IPR001482 Type II/IV secretion system protein VA249_04840 IPR037257 General secretory system II, protein E, N-terminal superfamily VA249_04840 IPR007831 General secretory system II, protein E, N-terminal VA249_04840 IPR042181 Type II secretion system, protein E, N-terminal VA249_04850 IPR012902 Prokaryotic N-terminal methylation site VA249_04850 IPR001082 Fimbrial protein pilin VA249_04860 IPR013785 Aldolase-type TIM barrel VA249_04860 IPR004393 Nicotinate-nucleotide pyrophosphorylase VA249_04860 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD VA249_04860 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal VA249_04860 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily VA249_04860 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal VA249_04860 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal VA249_04870 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily VA249_04870 IPR002502 N-acetylmuramoyl-L-alanine amidase domain VA249_04880 IPR008920 Transcription regulator FadR/GntR, C-terminal VA249_04880 IPR000524 Transcription regulator HTH, GntR VA249_04880 IPR036390 Winged helix DNA-binding domain superfamily VA249_04880 IPR011711 GntR, C-terminal VA249_04880 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_04890 IPR035807 Pyruvate dehydrogenase E1 component, N-terminal VA249_04890 IPR004660 Pyruvate dehydrogenase E1 component VA249_04890 IPR041621 Pyruvate dehydrogenase E1 component, middle domain VA249_04890 IPR029061 Thiamin diphosphate-binding fold VA249_04890 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II VA249_04890 IPR005474 Transketolase, N-terminal VA249_04900 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain VA249_04900 IPR004167 Peripheral subunit-binding domain VA249_04900 IPR036625 E3-binding domain superfamily VA249_04900 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily VA249_04900 IPR000089 Biotin/lipoyl attachment VA249_04900 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex VA249_04900 IPR011053 Single hybrid motif VA249_04900 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site VA249_04910 IPR036188 FAD/NAD(P)-binding domain superfamily VA249_04910 IPR023753 FAD/NAD(P)-binding domain VA249_04910 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily VA249_04910 IPR006258 Dihydrolipoamide dehydrogenase VA249_04910 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I VA249_04910 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VA249_04910 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site VA249_04920 IPR001647 DNA-binding HTH domain, TetR-type VA249_04920 IPR009057 Homeobox-like domain superfamily VA249_04920 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily VA249_04930 IPR005904 Hypoxanthine phosphoribosyl transferase VA249_04930 IPR000836 Phosphoribosyltransferase domain VA249_04930 IPR029057 Phosphoribosyltransferase-like VA249_04940 IPR001765 Carbonic anhydrase VA249_04940 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site VA249_04940 IPR036874 Carbonic anhydrase superfamily VA249_04950 IPR036513 STAS domain superfamily VA249_04950 IPR002645 STAS domain VA249_04950 IPR011547 SLC26A/SulP transporter domain VA249_04950 IPR001902 SLC26A/SulP transporter VA249_04960 IPR003593 AAA+ ATPase domain VA249_04960 IPR003439 ABC transporter-like VA249_04960 IPR017871 ABC transporter, conserved site VA249_04960 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_04970 IPR013525 ABC-2 type transporter VA249_04970 IPR000412 ABC-2 transporter VA249_04980 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VA249_04980 IPR042176 Pantoate-beta-alanine ligase, C-terminal domain VA249_04980 IPR004821 Cytidyltransferase-like domain VA249_04980 IPR003721 Pantoate-beta-alanine ligase VA249_04990 IPR040442 Pyruvate kinase-like domain superfamily VA249_04990 IPR003700 Ketopantoate hydroxymethyltransferase VA249_04990 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily VA249_05000 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK VA249_05000 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily VA249_05010 IPR025866 Polymerase A arginine-rich C-terminal domain VA249_05010 IPR002646 Poly A polymerase, head domain VA249_05010 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain VA249_05010 IPR010206 Poly(A) polymerase I VA249_05020 IPR022380 Glutamyl-Q tRNA(Asp) synthetase VA249_05020 IPR000924 Glutamyl/glutaminyl-tRNA synthetase VA249_05020 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain VA249_05020 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VA249_05030 IPR012784 RNA polymerase-binding transcription factor DksA VA249_05030 IPR037187 DksA, N-terminal domain superfamily VA249_05030 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria VA249_05030 IPR000962 Zinc finger, DksA/TraR C4-type VA249_05030 IPR020458 Zinc finger, DksA/TraR C4-type conserved site VA249_05040 IPR005224 Sugar fermentation stimulation protein VA249_05040 IPR040452 Sugar fermentation stimulation protein, C-terminal VA249_05040 IPR041465 SfsA, N-terminal OB domain VA249_05050 IPR011545 DEAD/DEAH box helicase domain VA249_05050 IPR014001 Helicase superfamily 1/2, ATP-binding domain VA249_05050 IPR001650 Helicase, C-terminal VA249_05050 IPR010225 ATP-dependent helicase HrpB VA249_05050 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_05050 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal VA249_05050 IPR007502 Helicase-associated domain VA249_05060 IPR012338 Beta-lactamase/transpeptidase-like VA249_05060 IPR001264 Glycosyl transferase, family 51 VA249_05060 IPR023346 Lysozyme-like domain superfamily VA249_05060 IPR011813 Penicillin-binding protein 1B VA249_05060 IPR036950 Penicillin binding protein transglycosylase domain VA249_05060 IPR001460 Penicillin-binding protein, transpeptidase VA249_05060 IPR028166 Bifunctional transglycosylase second domain VA249_05070 IPR001423 Lysophospholipase patatin, conserved site VA249_05070 IPR002641 Patatin-like phospholipase domain VA249_05070 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase VA249_05080 IPR018136 Aconitase family, 4Fe-4S cluster binding site VA249_05080 IPR015932 Aconitase, domain 2 VA249_05080 IPR015929 Aconitase B, swivel VA249_05080 IPR036288 Aconitase B, HEAT-like domain superfamily VA249_05080 IPR015933 Aconitase B, HEAT-like domain VA249_05080 IPR004406 Aconitase B VA249_05080 IPR036008 Aconitase, iron-sulfur domain VA249_05080 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 VA249_05080 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel VA249_05080 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain VA249_05090 IPR015932 Aconitase, domain 2 VA249_05090 IPR015929 Aconitase B, swivel VA249_05090 IPR036288 Aconitase B, HEAT-like domain superfamily VA249_05090 IPR015933 Aconitase B, HEAT-like domain VA249_05090 IPR004406 Aconitase B VA249_05090 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 VA249_05090 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain VA249_05090 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel VA249_05090 IPR018136 Aconitase family, 4Fe-4S cluster binding site VA249_05090 IPR036008 Aconitase, iron-sulfur domain VA249_05100 IPR004381 Glycerate kinase VA249_05100 IPR018197 Glycerate kinase, restriction-enzyme-like fold VA249_05100 IPR036129 Glycerate kinase superfamily VA249_05100 IPR018193 Glycerate kinase, flavodoxin-like fold VA249_05110 IPR003474 Gluconate transporter VA249_05120 IPR041522 CdaR, GGDEF-like domain VA249_05120 IPR008599 Putative sugar diacid recognition VA249_05120 IPR025736 PucR C-terminal helix-turn-helix domain VA249_05120 IPR042070 PucR C-terminal helix-turn-helix domain superfamily VA249_05130 IPR008249 Uncharacterised protein family UPF0231 VA249_05140 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal VA249_05140 IPR002332 Nitrogen regulatory protein P-II, urydylation site VA249_05140 IPR017918 Nitrogen regulatory protein PII, conserved site VA249_05140 IPR002187 Nitrogen regulatory protein PII VA249_05140 IPR011322 Nitrogen regulatory PII-like, alpha/beta VA249_05150 IPR029020 Ammonium/urea transporter VA249_05150 IPR001905 Ammonium transporter VA249_05150 IPR018047 Ammonium transporter, conserved site VA249_05150 IPR024041 Ammonium transporter AmtB-like domain VA249_05160 IPR026045 Ferric binding protein VA249_05160 IPR006059 Bacterial extracellular solute-binding protein VA249_05180 IPR017879 ABC transporter, spermidine/putrescine import ATP-binding protein, PotA VA249_05180 IPR003593 AAA+ ATPase domain VA249_05180 IPR003439 ABC transporter-like VA249_05180 IPR017871 ABC transporter, conserved site VA249_05180 IPR008995 Molybdate/tungstate binding, C-terminal VA249_05180 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_05180 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit VA249_05180 IPR013611 Transport-associated OB, type 2 VA249_05190 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I VA249_05190 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III VA249_05190 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II VA249_05190 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III VA249_05190 IPR005843 Alpha-D-phosphohexomutase, C-terminal VA249_05190 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily VA249_05190 IPR016066 Alpha-D-phosphohexomutase, conserved site VA249_05190 IPR005841 Alpha-D-phosphohexomutase superfamily VA249_05200 IPR037018 Glycoside hydrolase family 65, N-terminal domain superfamily VA249_05200 IPR037828 N,N'-diacetylchitobiose phosphorylase, N-terminal VA249_05200 IPR033432 Glycosyl hydrolase 36, catalytic domain VA249_05200 IPR011013 Galactose mutarotase-like domain superfamily VA249_05200 IPR010383 Glycosyl hydrolase 94 VA249_05200 IPR012341 Six-hairpin glycosidase-like superfamily VA249_05200 IPR008928 Six-hairpin glycosidase superfamily VA249_05200 IPR009342 Putative carbohydrate binding domain VA249_05210 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal VA249_05210 IPR029018 Beta-hexosaminidase-like, domain 2 VA249_05210 IPR017853 Glycoside hydrolase superfamily VA249_05210 IPR025705 Beta-hexosaminidase VA249_05210 IPR015883 Glycoside hydrolase family 20, catalytic domain VA249_05220 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type VA249_05240 IPR003593 AAA+ ATPase domain VA249_05240 IPR003439 ABC transporter-like VA249_05240 IPR017871 ABC transporter, conserved site VA249_05240 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal VA249_05240 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_05250 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_05250 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal VA249_05250 IPR017871 ABC transporter, conserved site VA249_05250 IPR003439 ABC transporter-like VA249_05250 IPR003593 AAA+ ATPase domain VA249_05260 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VA249_05260 IPR035906 MetI-like superfamily VA249_05260 IPR025966 Oligopeptide transport permease C-like, N-terminal domain VA249_05270 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VA249_05270 IPR035906 MetI-like superfamily VA249_05280 IPR039424 Solute-binding protein family 5 VA249_05280 IPR000914 Solute-binding protein family 5 domain VA249_05280 IPR030678 Peptide/nickel binding protein, MppA-type VA249_05280 IPR023765 Solute-binding protein family 5, conserved site VA249_05290 IPR015387 LuxQ, periplasmic VA249_05290 IPR011006 CheY-like superfamily VA249_05290 IPR003594 Histidine kinase/HSP90-like ATPase VA249_05290 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VA249_05290 IPR005467 Histidine kinase domain VA249_05290 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain VA249_05290 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily VA249_05290 IPR035965 PAS domain superfamily VA249_05290 IPR029151 Periplasmic sensor-like domain superfamily VA249_05290 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VA249_05290 IPR001789 Signal transduction response regulator, receiver domain VA249_05300 IPR002052 DNA methylase, N-6 adenine-specific, conserved site VA249_05300 IPR013675 Methyltransferase small, N-terminal VA249_05300 IPR023543 rRNA small subunit methyltransferase C VA249_05300 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VA249_05300 IPR007848 Methyltransferase small domain VA249_05310 IPR002549 Transmembrane protein TqsA-like VA249_05320 IPR015421 Pyridoxal phosphate-dependent transferase, major domain VA249_05320 IPR005814 Aminotransferase class-III VA249_05320 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase VA249_05320 IPR015424 Pyridoxal phosphate-dependent transferase VA249_05320 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 VA249_05330 IPR017870 FeS cluster insertion, C-terminal, conserved site VA249_05330 IPR016092 FeS cluster insertion protein VA249_05330 IPR000361 FeS cluster biogenesis VA249_05330 IPR023063 FeS cluster insertion protein ErpA VA249_05330 IPR035903 HesB-like domain superfamily VA249_05340 IPR039562 Membrane fusion protein, biotin-lipoyl like domain VA249_05350 IPR001036 Acriflavin resistance protein VA249_05350 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VA249_05360 IPR018392 LysM domain VA249_05360 IPR013731 Opacity-associated protein A, N-terminal VA249_05360 IPR016047 Peptidase M23 VA249_05360 IPR011055 Duplicated hybrid motif VA249_05370 IPR002942 RNA-binding S4 domain VA249_05370 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site VA249_05370 IPR002305 Aminoacyl-tRNA synthetase, class Ic VA249_05370 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VA249_05370 IPR036986 RNA-binding S4 domain superfamily VA249_05370 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 VA249_05370 IPR002307 Tyrosine-tRNA ligase VA249_05370 IPR024088 Tyrosine-tRNA ligase, bacterial-type VA249_05390 IPR012338 Beta-lactamase/transpeptidase-like VA249_05390 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C VA249_05400 IPR023614 Porin domain superfamily VA249_05400 IPR033900 Porin domain, Gram-negative type VA249_05410 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal VA249_05410 IPR023459 Transcription elongation factor GreA/GreB family VA249_05410 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal VA249_05410 IPR028624 Transcription elongation factor GreA/GreB VA249_05410 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily VA249_05410 IPR018151 Transcription elongation factor, GreA/GreB, conserved site VA249_05410 IPR006359 Transcription elongation factor GreA VA249_05410 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily VA249_05420 IPR017924 RNA-binding protein YhbY VA249_05420 IPR035920 YhbY-like superfamily VA249_05420 IPR001890 RNA-binding, CRM domain VA249_05430 IPR015507 Ribosomal RNA large subunit methyltransferase E VA249_05430 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VA249_05430 IPR002877 Ribosomal RNA methyltransferase FtsJ domain VA249_05440 IPR003593 AAA+ ATPase domain VA249_05440 IPR000642 Peptidase M41 VA249_05440 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_05440 IPR005936 Peptidase, FtsH VA249_05440 IPR003960 ATPase, AAA-type, conserved site VA249_05440 IPR003959 ATPase, AAA-type, core VA249_05440 IPR041569 AAA ATPase, AAA+ lid domain VA249_05440 IPR037219 Peptidase M41-like VA249_05440 IPR011546 Peptidase M41, FtsH extracellular VA249_05450 IPR006390 Dihydropteroate synthase VA249_05450 IPR011005 Dihydropteroate synthase-like VA249_05450 IPR000489 Pterin-binding domain VA249_05460 IPR006352 Phosphoglucosamine mutase, bacterial type VA249_05460 IPR005841 Alpha-D-phosphohexomutase superfamily VA249_05460 IPR016066 Alpha-D-phosphohexomutase, conserved site VA249_05460 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily VA249_05460 IPR005843 Alpha-D-phosphohexomutase, C-terminal VA249_05460 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III VA249_05460 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II VA249_05460 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III VA249_05460 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I VA249_05470 IPR004692 Preprotein translocase SecG subunit VA249_05480 IPR003728 Ribosome maturation factor RimP VA249_05480 IPR028998 Ribosome maturation factor RimP, C-terminal VA249_05480 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily VA249_05480 IPR028989 Ribosome maturation factor RimP, N-terminal VA249_05480 IPR035956 RimP, N-terminal domain superfamily VA249_05490 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical VA249_05490 IPR015946 K homology domain-like, alpha/beta VA249_05490 IPR025249 KH domain, NusA-like VA249_05490 IPR009019 K homology domain superfamily, prokaryotic type VA249_05490 IPR012340 Nucleic acid-binding, OB-fold VA249_05490 IPR010213 Transcription termination factor NusA VA249_05490 IPR030842 Transcription termination/antitermination protein NusA, bacterial VA249_05490 IPR036555 NusA, N-terminal domain superfamily VA249_05490 IPR022967 RNA-binding domain, S1 VA249_05490 IPR003029 S1 domain VA249_05490 IPR010214 Transcription termination factor NusA, C-terminal duplication VA249_05490 IPR013735 Transcription factor NusA, N-terminal VA249_05500 IPR005225 Small GTP-binding protein domain VA249_05500 IPR009000 Translation protein, beta-barrel domain superfamily VA249_05500 IPR036925 Translation initiation factor IF-2, domain 3 superfamily VA249_05500 IPR023115 Translation initiation factor IF- 2, domain 3 VA249_05500 IPR015760 Translation initiation factor IF- 2 VA249_05500 IPR000795 Transcription factor, GTP-binding domain VA249_05500 IPR000178 Translation initiation factor aIF-2, bacterial-like VA249_05500 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_05500 IPR006847 Translation initiation factor IF-2, N-terminal VA249_05500 IPR013575 Initiation factor 2 associated domain, bacterial VA249_05500 IPR009061 Putative DNA-binding domain superfamily VA249_05510 IPR023799 Ribosome-binding factor A domain superfamily VA249_05510 IPR015946 K homology domain-like, alpha/beta VA249_05510 IPR000238 Ribosome-binding factor A VA249_05510 IPR020053 Ribosome-binding factor A, conserved site VA249_05520 IPR014780 tRNA pseudouridine synthase II, TruB VA249_05520 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal VA249_05520 IPR032819 tRNA pseudouridylate synthase B, C-terminal VA249_05520 IPR036974 PUA domain superfamily VA249_05520 IPR015947 PUA-like superfamily VA249_05520 IPR002501 Pseudouridine synthase II, N-terminal VA249_05520 IPR020103 Pseudouridine synthase, catalytic domain superfamily VA249_05530 IPR009068 S15/NS1, RNA-binding VA249_05530 IPR005290 Ribosomal protein S15, bacterial-type VA249_05530 IPR000589 Ribosomal protein S15 VA249_05540 IPR022967 RNA-binding domain, S1 VA249_05540 IPR003029 S1 domain VA249_05540 IPR020568 Ribosomal protein S5 domain 2-type fold VA249_05540 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain VA249_05540 IPR027408 PNPase/RNase PH domain superfamily VA249_05540 IPR001247 Exoribonuclease, phosphorolytic domain 1 VA249_05540 IPR015847 Exoribonuclease, phosphorolytic domain 2 VA249_05540 IPR012162 Polyribonucleotide nucleotidyltransferase VA249_05540 IPR012340 Nucleic acid-binding, OB-fold VA249_05540 IPR036345 Exoribonuclease, PH domain 2 superfamily VA249_05540 IPR004087 K Homology domain VA249_05540 IPR004088 K Homology domain, type 1 VA249_05540 IPR036612 K Homology domain, type 1 superfamily VA249_05550 IPR019734 Tetratricopeptide repeat VA249_05550 IPR011990 Tetratricopeptide-like helical domain superfamily VA249_05550 IPR013105 Tetratricopeptide repeat 2 VA249_05550 IPR013026 Tetratricopeptide repeat-containing domain VA249_05550 IPR023605 Lipoprotein NlpI VA249_05560 IPR000835 MarR-type HTH domain VA249_05560 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_05560 IPR036390 Winged helix DNA-binding domain superfamily VA249_05570 IPR002528 Multi antimicrobial extrusion protein VA249_05580 IPR001539 Peptidase U32 VA249_05590 IPR001539 Peptidase U32 VA249_05590 IPR036206 Thiamin phosphate synthase superfamily VA249_05600 IPR001633 EAL domain VA249_05600 IPR035919 EAL domain superfamily VA249_05600 IPR000160 GGDEF domain VA249_05600 IPR005330 MHYT domain VA249_05600 IPR029787 Nucleotide cyclase VA249_05610 IPR039543 Lipid-binding protein POX18/YhbT/NSL-TP1 VA249_05610 IPR036527 SCP2 sterol-binding domain superfamily VA249_05610 IPR016830 Uncharacterised conserved protein UCP025550, lipid carrier protein, YhbT VA249_05610 IPR003033 SCP2 sterol-binding domain VA249_05620 IPR000182 GNAT domain VA249_05620 IPR016181 Acyl-CoA N-acyltransferase VA249_05660 IPR004161 Translation elongation factor EFTu-like, domain 2 VA249_05660 IPR009000 Translation protein, beta-barrel domain superfamily VA249_05660 IPR000795 Transcription factor, GTP-binding domain VA249_05660 IPR005225 Small GTP-binding protein domain VA249_05660 IPR041732 Peptide chain release factor 3, GTP-binding domain VA249_05660 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily VA249_05660 IPR032090 Peptide chain release factor 3, C-terminal VA249_05660 IPR004548 Peptide chain release factor 3 VA249_05660 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_05660 IPR035647 EF-G domain III/V-like VA249_05660 IPR031157 Tr-type G domain, conserved site VA249_05680 IPR001130 TatD family VA249_05680 IPR018228 Deoxyribonuclease, TatD-related, conserved site VA249_05680 IPR032466 Metal-dependent hydrolase VA249_05690 IPR011657 Concentrative nucleoside transporter C-terminal domain VA249_05690 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain VA249_05690 IPR002668 Concentrative nucleoside transporter N-terminal domain VA249_05690 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial VA249_05690 IPR008276 Concentrative nucleoside transporter VA249_05700 IPR013785 Aldolase-type TIM barrel VA249_05700 IPR011343 Deoxyribose-phosphate aldolase VA249_05700 IPR002915 DeoC/FbaB/ lacD aldolase VA249_05700 IPR023649 Deoxyribose-phosphate aldolase type II VA249_05710 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily VA249_05710 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic VA249_05710 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal VA249_05710 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily VA249_05710 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site VA249_05710 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase VA249_05710 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily VA249_05710 IPR017459 Glycosyl transferase family 3, N-terminal domain VA249_05710 IPR000312 Glycosyl transferase, family 3 VA249_05710 IPR013465 Thymidine phosphorylase VA249_05720 IPR024052 Phosphopentomutase DeoB cap domain superfamily VA249_05720 IPR010045 Phosphopentomutase VA249_05720 IPR006124 Metalloenzyme VA249_05720 IPR017850 Alkaline-phosphatase-like, core domain superfamily VA249_05730 IPR018016 Nucleoside phosphorylase, conserved site VA249_05730 IPR000845 Nucleoside phosphorylase domain VA249_05730 IPR035994 Nucleoside phosphorylase superfamily VA249_05730 IPR004402 Purine nucleoside phosphorylase DeoD-type VA249_05750 IPR023190 Phosphoserine phosphatase, domain 2 VA249_05750 IPR036412 HAD-like superfamily VA249_05750 IPR041449 Phosphoserine phosphatase, N-terminal VA249_05750 IPR023214 HAD superfamily VA249_05770 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VA249_05770 IPR003593 AAA+ ATPase domain VA249_05770 IPR004504 DNA repair protein RadA VA249_05770 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_05770 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain VA249_05770 IPR020568 Ribosomal protein S5 domain 2-type fold VA249_05770 IPR041166 LapB, rubredoxin metal binding domain VA249_05780 IPR005517 Translation elongation factor EFG/EF2, domain IV VA249_05780 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_05780 IPR031157 Tr-type G domain, conserved site VA249_05780 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VA249_05780 IPR005225 Small GTP-binding protein domain VA249_05780 IPR000795 Transcription factor, GTP-binding domain VA249_05780 IPR004161 Translation elongation factor EFTu-like, domain 2 VA249_05780 IPR035647 EF-G domain III/V-like VA249_05780 IPR035649 EFG, domain V VA249_05780 IPR004540 Translation elongation factor EFG/EF2 VA249_05780 IPR009022 Elongation factor G, domain III VA249_05780 IPR041095 Elongation Factor G, domain II VA249_05780 IPR009000 Translation protein, beta-barrel domain superfamily VA249_05780 IPR000640 Elongation factor EFG, domain V-like VA249_05780 IPR020568 Ribosomal protein S5 domain 2-type fold VA249_05790 IPR042099 AMP-dependent synthetase-like superfamily VA249_05790 IPR020845 AMP-binding, conserved site VA249_05790 IPR000873 AMP-dependent synthetase/ligase VA249_05810 IPR005119 LysR, substrate-binding VA249_05810 IPR036390 Winged helix DNA-binding domain superfamily VA249_05810 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_05810 IPR000847 Transcription regulator HTH, LysR VA249_05820 IPR000843 LacI-type HTH domain VA249_05820 IPR028082 Periplasmic binding protein-like I VA249_05820 IPR010982 Lambda repressor-like, DNA-binding domain superfamily VA249_05830 IPR005886 UDP-glucose 4-epimerase VA249_05830 IPR036291 NAD(P)-binding domain superfamily VA249_05830 IPR016040 NAD(P)-binding domain VA249_05840 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal VA249_05840 IPR001937 Galactose-1-phosphate uridyl transferase, class I VA249_05840 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site VA249_05840 IPR036265 HIT-like superfamily VA249_05840 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal VA249_05850 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VA249_05850 IPR013750 GHMP kinase, C-terminal domain VA249_05850 IPR036554 GHMP kinase, C-terminal domain superfamily VA249_05850 IPR019539 Galactokinase galactose-binding domain VA249_05850 IPR000705 Galactokinase VA249_05850 IPR022963 Galactokinase, bacterial VA249_05850 IPR020568 Ribosomal protein S5 domain 2-type fold VA249_05850 IPR006204 GHMP kinase N-terminal domain VA249_05850 IPR006203 GHMP kinase, ATP-binding, conserved site VA249_05850 IPR006206 Mevalonate/galactokinase VA249_05850 IPR019741 Galactokinase, conserved site VA249_05860 IPR018052 Aldose 1-epimerase, conserved site VA249_05860 IPR015443 Aldose 1-epimerase VA249_05860 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase VA249_05860 IPR011013 Galactose mutarotase-like domain superfamily VA249_05860 IPR014718 Glycoside hydrolase-type carbohydrate-binding VA249_05860 IPR013458 Aldose 1-epimerase, bacterial VA249_05870 IPR000843 LacI-type HTH domain VA249_05870 IPR010982 Lambda repressor-like, DNA-binding domain superfamily VA249_05870 IPR028082 Periplasmic binding protein-like I VA249_05900 IPR008258 Transglycosylase SLT domain 1 VA249_05900 IPR000189 Prokaryotic transglycosylase, active site VA249_05900 IPR024570 Murein transglycosylase-C, N-terminal VA249_05900 IPR023664 Murein transglycosylase-C VA249_05900 IPR023346 Lysozyme-like domain superfamily VA249_05910 IPR031656 Alpha-glycerophosphate oxidase, C-terminal VA249_05910 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase VA249_05910 IPR036188 FAD/NAD(P)-binding domain superfamily VA249_05910 IPR006076 FAD dependent oxidoreductase VA249_05910 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily VA249_05920 IPR005999 Glycerol kinase VA249_05920 IPR000577 Carbohydrate kinase, FGGY VA249_05920 IPR018485 Carbohydrate kinase, FGGY, C-terminal VA249_05920 IPR018484 Carbohydrate kinase, FGGY, N-terminal VA249_05920 IPR018483 Carbohydrate kinase, FGGY, conserved site VA249_05930 IPR018483 Carbohydrate kinase, FGGY, conserved site VA249_05930 IPR005999 Glycerol kinase VA249_05930 IPR018484 Carbohydrate kinase, FGGY, N-terminal VA249_05930 IPR000577 Carbohydrate kinase, FGGY VA249_05930 IPR018485 Carbohydrate kinase, FGGY, C-terminal VA249_05950 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase VA249_05950 IPR015421 Pyridoxal phosphate-dependent transferase, major domain VA249_05950 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site VA249_05950 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 VA249_05950 IPR000192 Aminotransferase class V domain VA249_05950 IPR015424 Pyridoxal phosphate-dependent transferase VA249_05960 IPR017627 Conserved hypothetical protein CHP03214, putative allantoin-urate catabolism protein VA249_05960 IPR013096 Cupin 2, conserved barrel VA249_05960 IPR008579 Domain of unknown function DUF861, cupin-3 VA249_05960 IPR014710 RmlC-like jelly roll fold VA249_05960 IPR011051 RmlC-like cupin domain superfamily VA249_05970 IPR003964 Carbamate kinase VA249_05970 IPR036393 Acetylglutamate kinase-like superfamily VA249_05970 IPR001048 Aspartate/glutamate/uridylate kinase VA249_05980 IPR005119 LysR, substrate-binding VA249_05980 IPR036390 Winged helix DNA-binding domain superfamily VA249_05980 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_05980 IPR000847 Transcription regulator HTH, LysR VA249_05990 IPR005811 ATP-citrate lyase/succinyl-CoA ligase VA249_05990 IPR003781 CoA-binding VA249_05990 IPR016102 Succinyl-CoA synthetase-like VA249_06000 IPR024033 Uncharacterised domain superfamily, YlbE VA249_06000 IPR009499 Protein of unknown function DUF1116 VA249_06010 IPR021530 Protein of unknown function DUF2877 VA249_06020 IPR036111 Malate/L-sulfolactate/L-lactate dehydrogenase-like superfamily VA249_06020 IPR003767 Malate/L-lactate dehydrogenase-like VA249_06020 IPR017590 Ureidoglycolate dehydrogenase VA249_06030 IPR017591 Allantoate amidohydrolase VA249_06030 IPR010158 Amidase, carbamoylase-type VA249_06030 IPR036264 Bacterial exopeptidase dimerisation domain VA249_06030 IPR002933 Peptidase M20 VA249_06050 IPR036458 Sodium:dicarboxylate symporter superfamily VA249_06050 IPR018107 Sodium:dicarboxylate symporter, conserved site VA249_06050 IPR001991 Sodium:dicarboxylate symporter VA249_06050 IPR033380 Glutamate-aspartate symport protein GltP/GltT VA249_06050 IPR034703 Proton/glutamate-aspartate symporter GltP VA249_06060 IPR012681 Nucleobase cation symporter-1, NCS1 VA249_06060 IPR001248 Purine-cytosine permease VA249_06060 IPR038271 Purine-cytosine permease superfamily VA249_06070 IPR017593 Allantoinase VA249_06070 IPR006680 Amidohydrolase-related VA249_06070 IPR011059 Metal-dependent hydrolase, composite domain superfamily VA249_06070 IPR032466 Metal-dependent hydrolase VA249_06080 IPR024060 Ureidoglycolate lyase domain superfamily VA249_06080 IPR023525 Ureidoglycolate lyase, bacterial VA249_06080 IPR011051 RmlC-like cupin domain superfamily VA249_06080 IPR007247 Ureidoglycolate lyase VA249_06090 IPR029035 DHS-like NAD/FAD-binding domain superfamily VA249_06090 IPR006397 Glyoxylate carboligase VA249_06090 IPR029061 Thiamin diphosphate-binding fold VA249_06090 IPR012000 Thiamine pyrophosphate enzyme, central domain VA249_06090 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain VA249_06090 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding VA249_06100 IPR013022 Xylose isomerase-like, TIM barrel domain VA249_06100 IPR036237 Xylose isomerase-like superfamily VA249_06100 IPR026040 Hydroxypyruvate isomerase-like VA249_06100 IPR017643 Hydroxypyruvate isomerase VA249_06110 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site VA249_06110 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily VA249_06110 IPR013328 6-phosphogluconate dehydrogenase, domain 2 VA249_06110 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding VA249_06110 IPR015815 3-hydroxyisobutyrate dehydrogenase-related VA249_06110 IPR036291 NAD(P)-binding domain superfamily VA249_06110 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain VA249_06110 IPR006398 2-hydroxy-3-oxopropionate reductase VA249_06120 IPR018197 Glycerate kinase, restriction-enzyme-like fold VA249_06120 IPR018193 Glycerate kinase, flavodoxin-like fold VA249_06120 IPR036129 Glycerate kinase superfamily VA249_06120 IPR004381 Glycerate kinase VA249_06130 IPR011004 Trimeric LpxA-like superfamily VA249_06130 IPR019876 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, gammaproteobacteria VA249_06130 IPR001451 Hexapeptide repeat VA249_06130 IPR032784 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain VA249_06130 IPR038361 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain superfamily VA249_06130 IPR026586 Type 2 tetrahydrodipicolinate N-succinyltransferase family VA249_06160 IPR009813 Uncharacterised protein family YebG VA249_06160 IPR038627 YebG-like superfamily VA249_06170 IPR000847 Transcription regulator HTH, LysR VA249_06170 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_06170 IPR036390 Winged helix DNA-binding domain superfamily VA249_06170 IPR005119 LysR, substrate-binding VA249_06190 IPR013986 DExx box DNA helicase domain superfamily VA249_06190 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_06190 IPR006697 RecBCD enzyme subunit RecC VA249_06190 IPR041500 RecC, C-terminal VA249_06190 IPR011335 Restriction endonuclease type II-like VA249_06200 IPR014016 UvrD-like helicase, ATP-binding domain VA249_06200 IPR011335 Restriction endonuclease type II-like VA249_06200 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_06200 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type VA249_06200 IPR011604 Exonuclease, phage-type/RecB, C-terminal VA249_06200 IPR034739 UvrD/AddA helicase, N-terminal VA249_06200 IPR014017 UvrD-like DNA helicase, C-terminal VA249_06200 IPR004586 RecBCD enzyme subunit RecB VA249_06200 IPR000212 DNA helicase, UvrD/REP type VA249_06210 IPR006344 RecBCD enzyme subunit RecD VA249_06210 IPR041851 RecBCD enzyme subunit RecD, N-terminal domain VA249_06210 IPR027785 UvrD-like helicase C-terminal domain VA249_06210 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_06210 IPR003593 AAA+ ATPase domain VA249_06220 IPR036393 Acetylglutamate kinase-like superfamily VA249_06220 IPR016181 Acyl-CoA N-acyltransferase VA249_06220 IPR001048 Aspartate/glutamate/uridylate kinase VA249_06220 IPR000182 GNAT domain VA249_06220 IPR033719 N-acetylglutamate synthase, kinase-like domain VA249_06220 IPR010167 Amino-acid N-acetyltransferase VA249_06240 IPR026044 Membrane-bound lytic murein transglycosylase A VA249_06240 IPR010611 3D domain VA249_06240 IPR034654 MltA, 3D domain VA249_06240 IPR005300 Lytic transglycosylase MltA, domain B VA249_06240 IPR036908 RlpA-like domain superfamily VA249_06250 IPR035985 Ubiquitin-activating enzyme VA249_06250 IPR000594 THIF-type NAD/FAD binding fold VA249_06260 IPR017763 Cysteine desulfurase, sulphur acceptor subunit CsdE VA249_06260 IPR003808 Fe-S metabolism associated domain, SufE-like VA249_06270 IPR022471 Cysteine desulphurase, catalytic subunit, CsdA VA249_06270 IPR015421 Pyridoxal phosphate-dependent transferase, major domain VA249_06270 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 VA249_06270 IPR000192 Aminotransferase class V domain VA249_06270 IPR016454 Cysteine desulfurase VA249_06270 IPR010970 Cysteine desulfurase, SufS VA249_06270 IPR015424 Pyridoxal phosphate-dependent transferase VA249_06280 IPR029062 Class I glutamine amidotransferase-like VA249_06280 IPR006287 Protein/nucleic acid deglycase DJ-1 VA249_06280 IPR002818 DJ-1/PfpI VA249_06290 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily VA249_06290 IPR003710 Ketopantoate reductase ApbA/PanE VA249_06290 IPR013328 6-phosphogluconate dehydrogenase, domain 2 VA249_06290 IPR013332 Ketopantoate reductase, N-terminal domain VA249_06290 IPR036291 NAD(P)-binding domain superfamily VA249_06290 IPR013752 Ketopantoate reductase, C-terminal domain VA249_06300 IPR003055 Nucleoside-specific channel-forming protein Tsx VA249_06300 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like VA249_06300 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily VA249_06330 IPR039425 RNA polymerase sigma-70 like VA249_06330 IPR014284 RNA polymerase sigma-70 like domain VA249_06330 IPR007630 RNA polymerase sigma-70 region 4 VA249_06330 IPR013325 RNA polymerase sigma factor, region 2 VA249_06330 IPR013324 RNA polymerase sigma factor, region 3/4-like VA249_06330 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_06330 IPR007627 RNA polymerase sigma-70 region 2 VA249_06370 IPR004752 AmpG-like permease/Acetyl-coenzyme A transporter 1 VA249_06370 IPR011701 Major facilitator superfamily VA249_06370 IPR020846 Major facilitator superfamily domain VA249_06370 IPR036259 MFS transporter superfamily VA249_06380 IPR029000 Cyclophilin-like domain superfamily VA249_06380 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site VA249_06380 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain VA249_06400 IPR007848 Methyltransferase small domain VA249_06400 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD VA249_06400 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VA249_06410 IPR002634 BolA protein VA249_06410 IPR036065 BolA-like superfamily VA249_06420 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A VA249_06420 IPR022615 Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain VA249_06430 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B VA249_06430 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD VA249_06440 IPR007329 FMN-binding VA249_06440 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C VA249_06450 IPR003667 NqrDE/RnfAE VA249_06450 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D VA249_06460 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E VA249_06460 IPR003667 NqrDE/RnfAE VA249_06470 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F VA249_06470 IPR017938 Riboflavin synthase-like beta-barrel VA249_06470 IPR001433 Oxidoreductase FAD/NAD(P)-binding VA249_06470 IPR036010 2Fe-2S ferredoxin-like superfamily VA249_06470 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VA249_06470 IPR012675 Beta-grasp domain superfamily VA249_06470 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain VA249_06470 IPR017927 FAD-binding domain, ferredoxin reductase-type VA249_06470 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase VA249_06470 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain VA249_06480 IPR024932 Flavin transferase ApbE VA249_06480 IPR003374 ApbE-like superfamily VA249_06480 IPR042159 Flavin-trafficking protein ApbE VA249_06500 IPR001789 Signal transduction response regulator, receiver domain VA249_06500 IPR029787 Nucleotide cyclase VA249_06500 IPR011006 CheY-like superfamily VA249_06500 IPR000160 GGDEF domain VA249_06510 IPR003660 HAMP domain VA249_06510 IPR033479 Double Cache domain 1 VA249_06510 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding VA249_06510 IPR029151 Periplasmic sensor-like domain superfamily VA249_06510 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VA249_06520 IPR001126 UmuC domain VA249_06520 IPR024728 DNA polymerase type-Y, HhH motif VA249_06520 IPR022880 DNA polymerase IV VA249_06520 IPR017961 DNA polymerase, Y-family, little finger domain VA249_06520 IPR036775 DNA polymerase, Y-family, little finger domain superfamily VA249_06530 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_06530 IPR018982 RQC domain VA249_06530 IPR011545 DEAD/DEAH box helicase domain VA249_06530 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_06530 IPR002121 HRDC domain VA249_06530 IPR010997 HRDC-like superfamily VA249_06530 IPR001650 Helicase, C-terminal VA249_06530 IPR014001 Helicase superfamily 1/2, ATP-binding domain VA249_06530 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial VA249_06530 IPR004589 DNA helicase, ATP-dependent, RecQ type VA249_06530 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain VA249_06540 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily VA249_06540 IPR018151 Transcription elongation factor, GreA/GreB, conserved site VA249_06540 IPR006359 Transcription elongation factor GreA VA249_06540 IPR028624 Transcription elongation factor GreA/GreB VA249_06540 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal VA249_06540 IPR023459 Transcription elongation factor GreA/GreB family VA249_06540 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal VA249_06540 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily VA249_06560 IPR037272 Sodium:neurotransmitter symporter superfamily VA249_06560 IPR000175 Sodium:neurotransmitter symporter VA249_06580 IPR009624 Uncharacterised protein family UPF0253 VA249_06600 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) VA249_06600 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 VA249_06600 IPR006195 Aminoacyl-tRNA synthetase, class II VA249_06600 IPR004154 Anticodon-binding VA249_06600 IPR036621 Anticodon-binding domain superfamily VA249_06600 IPR002316 Proline-tRNA ligase, class IIa VA249_06600 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily VA249_06600 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain VA249_06600 IPR033730 Prokaryote proline-tRNA ligase core domain VA249_06600 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type VA249_06610 IPR023370 TrmO-like, N-terminal domain VA249_06610 IPR023368 Uncharacterised protein family UPF0066, conserved site VA249_06610 IPR041369 TrmO, C-terminal VA249_06610 IPR036413 YaeB-like superfamily VA249_06610 IPR040372 YaeB-like VA249_06610 IPR036414 YaeB, N-terminal domain superfamily VA249_06620 IPR004697 p-Aminobenzoyl-glutamate transport protein AbgT VA249_06620 IPR011540 AbgT, Proteobacteria VA249_06630 IPR003791 Protein of unknown function UPF0178 VA249_06670 IPR036814 YqcC-like superfamily VA249_06670 IPR007384 Protein of unknown function UCP006257 VA249_06670 IPR023376 YqcC-like domain VA249_06680 IPR006145 Pseudouridine synthase, RsuA/RluA VA249_06680 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site VA249_06680 IPR020103 Pseudouridine synthase, catalytic domain superfamily VA249_06690 IPR020911 Uncharacterised protein family UPF0325 VA249_06700 IPR006674 HD domain VA249_06700 IPR002912 ACT domain VA249_06700 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme VA249_06700 IPR002934 Polymerase, nucleotidyl transferase domain VA249_06700 IPR003607 HD/PDEase domain VA249_06700 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase VA249_06710 IPR000994 Peptidase M24 VA249_06710 IPR036005 Creatinase/aminopeptidase-like VA249_06710 IPR001714 Peptidase M24, methionine aminopeptidase VA249_06710 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 VA249_06720 IPR001865 Ribosomal protein S2 VA249_06720 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily VA249_06720 IPR018130 Ribosomal protein S2, conserved site VA249_06720 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid VA249_06730 IPR018101 Translation elongation factor Ts, conserved site VA249_06730 IPR001816 Translation elongation factor EFTs/EF1B VA249_06730 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation VA249_06730 IPR009060 UBA-like superfamily VA249_06730 IPR036402 Elongation factor Ts, dimerisation domain superfamily VA249_06740 IPR001048 Aspartate/glutamate/uridylate kinase VA249_06740 IPR011817 Uridylate kinase VA249_06740 IPR036393 Acetylglutamate kinase-like superfamily VA249_06740 IPR015963 Uridylate kinase, bacteria VA249_06750 IPR002661 Ribosome recycling factor VA249_06750 IPR023584 Ribosome recycling factor domain VA249_06750 IPR036191 RRF superfamily VA249_06760 IPR001441 Decaprenyl diphosphate synthase-like VA249_06760 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site VA249_06760 IPR036424 Decaprenyl diphosphate synthase-like superfamily VA249_06770 IPR000374 Phosphatidate cytidylyltransferase VA249_06780 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal VA249_06780 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase VA249_06780 IPR036291 NAD(P)-binding domain superfamily VA249_06780 IPR036169 DXP reductoisomerase, C-terminal domain superfamily VA249_06780 IPR026877 DXP reductoisomerase C-terminal domain VA249_06780 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal VA249_06790 IPR036034 PDZ superfamily VA249_06790 IPR041489 PDZ domain 6 VA249_06790 IPR001478 PDZ domain VA249_06790 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase VA249_06790 IPR008915 Peptidase M50 VA249_06800 IPR039910 Surface antigen D15-like VA249_06800 IPR000184 Bacterial surface antigen (D15) VA249_06800 IPR034746 POTRA domain VA249_06800 IPR023707 Outer membrane protein assembly factor BamA VA249_06800 IPR010827 POTRA domain, BamA/TamA-like VA249_06810 IPR024930 Skp domain superfamily VA249_06810 IPR005632 Chaperone protein Skp VA249_06820 IPR011004 Trimeric LpxA-like superfamily VA249_06820 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD VA249_06820 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region VA249_06820 IPR001451 Hexapeptide repeat VA249_06830 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ VA249_06830 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ VA249_06830 IPR029069 HotDog domain superfamily VA249_06840 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal VA249_06840 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily VA249_06840 IPR001451 Hexapeptide repeat VA249_06840 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase VA249_06840 IPR011004 Trimeric LpxA-like superfamily VA249_06850 IPR003835 Glycosyl transferase, family 19 VA249_06860 IPR036397 Ribonuclease H superfamily VA249_06860 IPR001352 Ribonuclease HII/HIII VA249_06860 IPR024567 Ribonuclease HII/HIII domain VA249_06860 IPR022898 Ribonuclease HII VA249_06860 IPR012337 Ribonuclease H-like superfamily VA249_06870 IPR041931 Bacterial DNA polymerase III alpha subunit, thumb domain VA249_06870 IPR040982 DNA polymerase III alpha subunit finger domain VA249_06870 IPR029460 DNA polymerase, helix-hairpin-helix motif VA249_06870 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type VA249_06870 IPR004013 PHP domain VA249_06870 IPR003141 Polymerase/histidinol phosphatase, N-terminal VA249_06870 IPR016195 Polymerase/histidinol phosphatase-like VA249_06870 IPR004805 DNA polymerase III, alpha subunit VA249_06870 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain VA249_06880 IPR001095 Acetyl-CoA carboxylase, alpha subunit VA249_06880 IPR029045 ClpP/crotonase-like domain superfamily VA249_06880 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal VA249_06890 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain VA249_06890 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal VA249_06890 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal VA249_06890 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VA249_06890 IPR012094 tRNA(Ile)-lysidine synthase VA249_06890 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal VA249_06900 IPR009056 Cytochrome c-like domain VA249_06900 IPR036909 Cytochrome c-like domain superfamily VA249_06910 IPR002187 Nitrogen regulatory protein PII VA249_06910 IPR011322 Nitrogen regulatory PII-like, alpha/beta VA249_06910 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal VA249_06910 IPR017918 Nitrogen regulatory protein PII, conserved site VA249_06910 IPR002332 Nitrogen regulatory protein P-II, urydylation site VA249_06920 IPR036691 Endonuclease/exonuclease/phosphatase superfamily VA249_06920 IPR022958 Uncharacterised protein family UPF0294 VA249_06940 IPR008258 Transglycosylase SLT domain 1 VA249_06940 IPR000189 Prokaryotic transglycosylase, active site VA249_06940 IPR018392 LysM domain VA249_06940 IPR036779 LysM domain superfamily VA249_06940 IPR023346 Lysozyme-like domain superfamily VA249_06950 IPR017782 Hydroxyacylglutathione hydrolase VA249_06950 IPR001279 Metallo-beta-lactamase VA249_06950 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VA249_06950 IPR035680 Hydroxyacylglutathione hydrolase, MBL domain VA249_06950 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain VA249_06960 IPR026669 Arsenite methyltransferase-like VA249_06960 IPR013216 Methyltransferase type 11 VA249_06960 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VA249_06970 IPR012337 Ribonuclease H-like superfamily VA249_06970 IPR002156 Ribonuclease H domain VA249_06970 IPR036397 Ribonuclease H superfamily VA249_06970 IPR022892 Ribonuclease HI VA249_06980 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain VA249_06980 IPR006309 DNA polymerase 3, epsilon subunit VA249_06980 IPR013520 Exonuclease, RNase T/DNA polymerase III VA249_06980 IPR036397 Ribonuclease H superfamily VA249_06980 IPR012337 Ribonuclease H-like superfamily VA249_07010 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain VA249_07010 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal VA249_07010 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal VA249_07010 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal VA249_07010 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily VA249_07010 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type VA249_07010 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily VA249_07020 IPR035461 GmhA/DiaA VA249_07020 IPR004515 Phosphoheptose isomerase VA249_07020 IPR001347 Sugar isomerase (SIS) VA249_07030 IPR017932 Glutamine amidotransferase type 2 domain VA249_07030 IPR029055 Nucleophile aminohydrolases, N-terminal VA249_07030 IPR026869 Putative glutamine amidotransferase type 2 VA249_07050 IPR001555 Phosphoribosylglycinamide formyltransferase, active site VA249_07050 IPR036477 Formyl transferase, N-terminal domain superfamily VA249_07050 IPR004607 Phosphoribosylglycinamide formyltransferase VA249_07050 IPR002376 Formyl transferase, N-terminal VA249_07060 IPR010918 PurM-like, C-terminal domain VA249_07060 IPR036676 PurM-like, C-terminal domain superfamily VA249_07060 IPR016188 PurM-like, N-terminal domain VA249_07060 IPR036921 PurM-like, N-terminal domain superfamily VA249_07060 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase VA249_07070 IPR000836 Phosphoribosyltransferase domain VA249_07070 IPR029057 Phosphoribosyltransferase-like VA249_07070 IPR034332 Uracil phosphoribosyltransferase, bacterial-type VA249_07070 IPR005765 Uracil phosphoribosyl transferase VA249_07080 IPR029935 Uracil permease VA249_07080 IPR006043 Xanthine/uracil/vitamin C permease VA249_07080 IPR006042 Xanthine/uracil permease VA249_07110 IPR010089 Flavoprotein WrbA-like VA249_07110 IPR008254 Flavodoxin/nitric oxide synthase VA249_07110 IPR001226 Flavodoxin, conserved site VA249_07110 IPR029039 Flavoprotein-like superfamily VA249_07110 IPR005025 NADPH-dependent FMN reductase-like VA249_07120 IPR036249 Thioredoxin-like superfamily VA249_07120 IPR006660 Arsenate reductase-like VA249_07120 IPR006659 Arsenate reductase VA249_07130 IPR019734 Tetratricopeptide repeat VA249_07130 IPR011990 Tetratricopeptide-like helical domain superfamily VA249_07130 IPR013026 Tetratricopeptide repeat-containing domain VA249_07130 IPR030873 Beta-barrel assembly-enhancing protease VA249_07130 IPR001915 Peptidase M48 VA249_07150 IPR002549 Transmembrane protein TqsA-like VA249_07160 IPR036249 Thioredoxin-like superfamily VA249_07160 IPR013766 Thioredoxin domain VA249_07160 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant VA249_07170 IPR002912 ACT domain VA249_07170 IPR016867 Glycine cleavage system transcriptional repressor VA249_07180 IPR020625 Schiff base-forming aldolase, active site VA249_07180 IPR013785 Aldolase-type TIM barrel VA249_07180 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA VA249_07180 IPR002220 DapA-like VA249_07180 IPR020624 Schiff base-forming aldolase, conserved site VA249_07190 IPR010653 NlpB/DapX lipoprotein VA249_07190 IPR014524 Outer membrane protein assembly factor BamC VA249_07190 IPR042268 Outer membrane protein assembly factor BamC, C-terminal VA249_07220 IPR011650 Peptidase M20, dimerisation domain VA249_07220 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria VA249_07220 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site VA249_07220 IPR036264 Bacterial exopeptidase dimerisation domain VA249_07220 IPR002933 Peptidase M20 VA249_07230 IPR006504 Transcriptional regulator Spx/MgsR VA249_07230 IPR006660 Arsenate reductase-like VA249_07230 IPR036249 Thioredoxin-like superfamily VA249_07280 IPR023009 Tyrosine recombinase XerC/XerD VA249_07280 IPR011010 DNA breaking-rejoining enzyme, catalytic core VA249_07280 IPR013762 Integrase-like, catalytic domain superfamily VA249_07280 IPR002104 Integrase, catalytic domain VA249_07280 IPR010998 Integrase/recombinase, N-terminal VA249_07280 IPR004107 Integrase, SAM-like, N-terminal VA249_07280 IPR011931 Tyrosine recombinase XerC VA249_07330 IPR012337 Ribonuclease H-like superfamily VA249_07330 IPR036397 Ribonuclease H superfamily VA249_07330 IPR025948 HTH-like domain VA249_07330 IPR001584 Integrase, catalytic core VA249_07460 IPR006314 Dyp-type peroxidase VA249_07460 IPR011008 Dimeric alpha-beta barrel VA249_07470 IPR010810 Flagellin hook, IN motif VA249_07470 IPR001029 Flagellin, D0/D1 domain VA249_07470 IPR042187 Flagellin, C-terminal domain, subdomain 2 VA249_07470 IPR001492 Flagellin VA249_07480 IPR010810 Flagellin hook, IN motif VA249_07480 IPR001029 Flagellin, D0/D1 domain VA249_07480 IPR042187 Flagellin, C-terminal domain, subdomain 2 VA249_07480 IPR001492 Flagellin VA249_07490 IPR042187 Flagellin, C-terminal domain, subdomain 2 VA249_07490 IPR001492 Flagellin VA249_07490 IPR010810 Flagellin hook, IN motif VA249_07490 IPR001029 Flagellin, D0/D1 domain VA249_07500 IPR035924 FlaG-like superfamily VA249_07500 IPR005186 FlaG protein VA249_07510 IPR003481 Flagellar hook-associated protein 2, N-terminal VA249_07510 IPR010809 Flagellar hook-associated protein 2, C-terminal VA249_07510 IPR040026 Flagellar hook-associated protein 2 VA249_07510 IPR010810 Flagellin hook, IN motif VA249_07530 IPR036584 Flagellar protein FliS superfamily VA249_07530 IPR003713 Flagellar protein FliS VA249_07540 IPR011006 CheY-like superfamily VA249_07540 IPR025944 Sigma-54 interaction domain, conserved site VA249_07540 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VA249_07540 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VA249_07540 IPR002078 RNA polymerase sigma factor 54 interaction domain VA249_07540 IPR003593 AAA+ ATPase domain VA249_07540 IPR002197 DNA binding HTH domain, Fis-type VA249_07540 IPR009057 Homeobox-like domain superfamily VA249_07540 IPR010518 Flagellar regulatory FleQ VA249_07540 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_07550 IPR003594 Histidine kinase/HSP90-like ATPase VA249_07550 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VA249_07550 IPR005467 Histidine kinase domain VA249_07550 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain VA249_07550 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily VA249_07550 IPR000014 PAS domain VA249_07550 IPR035965 PAS domain superfamily VA249_07550 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VA249_07560 IPR029995 Transcriptional activator SfnR/FlbD VA249_07560 IPR025944 Sigma-54 interaction domain, conserved site VA249_07560 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VA249_07560 IPR002078 RNA polymerase sigma factor 54 interaction domain VA249_07560 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VA249_07560 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_07560 IPR002197 DNA binding HTH domain, Fis-type VA249_07560 IPR001789 Signal transduction response regulator, receiver domain VA249_07560 IPR009057 Homeobox-like domain superfamily VA249_07560 IPR011006 CheY-like superfamily VA249_07560 IPR003593 AAA+ ATPase domain VA249_07570 IPR001624 Flagellar hook-basal body complex protein FliE VA249_07580 IPR013556 Flagellar M-ring C-terminal VA249_07580 IPR000067 Flagellar M-ring protein FliF VA249_07580 IPR006182 Secretory protein YscJ/FliF VA249_07590 IPR028263 Flagellar motor switch protein FliG, N-terminal domain VA249_07590 IPR032779 Flagellar motor switch protein FliG, middle domain VA249_07590 IPR011002 Flagellar motor switch protein FliG, alpha-helical VA249_07590 IPR000090 Flagellar motor switch protein FliG VA249_07590 IPR023087 Flagellar motor switch protein FliG, C-terminal VA249_07610 IPR040627 T3SS EscN ATPase, C-terminal VA249_07610 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_07610 IPR005714 ATPase, type III secretion system, FliI/YscN VA249_07610 IPR020005 Flagellar export ATPase FliI, clade 1 VA249_07610 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain VA249_07610 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site VA249_07610 IPR003593 AAA+ ATPase domain VA249_07610 IPR032463 ATPase, type III secretion system, FliI VA249_07650 IPR028976 CheC-like superfamily VA249_07650 IPR001689 Flagellar motor switch protein FliM VA249_07650 IPR001543 Surface presentation of antigen (SpoA) VA249_07650 IPR036429 SpoA-like superfamily VA249_07660 IPR036429 SpoA-like superfamily VA249_07660 IPR012826 Flagellar motor switch FliN VA249_07660 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb VA249_07660 IPR001543 Surface presentation of antigen (SpoA) VA249_07670 IPR022781 Flagellar biosynthesis protein, FliO VA249_07680 IPR005837 Flagellar transport protein FliP VA249_07680 IPR005838 Type III secretion system inner membrane P protein VA249_07690 IPR002191 Bacterial export protein family 3 VA249_07690 IPR006305 Flagellar biosynthesis protein FliQ VA249_07700 IPR006303 Flagellar biosynthesis protein FliR VA249_07700 IPR002010 Type III secretion system inner membrane R protein VA249_07710 IPR006136 Flagellar biosynthetic protein FlhB VA249_07710 IPR006135 Type III secretion system substrate exporter VA249_07710 IPR029025 Type III secretion system substrate exporter, C-terminal VA249_07720 IPR042194 FHIPEP, domain 1 VA249_07720 IPR042193 FHIPEP, domain 3 VA249_07720 IPR042196 FHIPEP, domain 4 VA249_07720 IPR025505 FHIPEP conserved site VA249_07720 IPR006301 Flagellar biosynthesis protein FlhA VA249_07720 IPR001712 Type III secretion system FHIPEP VA249_07730 IPR003593 AAA+ ATPase domain VA249_07730 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_07730 IPR020006 Flagellar biosynthesis protein FlhF VA249_07730 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain VA249_07740 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 VA249_07740 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_07740 IPR025501 ATP binding protein MinD VA249_07750 IPR014284 RNA polymerase sigma-70 like domain VA249_07750 IPR000943 RNA polymerase sigma-70 VA249_07750 IPR007627 RNA polymerase sigma-70 region 2 VA249_07750 IPR007624 RNA polymerase sigma-70 region 3 VA249_07750 IPR007630 RNA polymerase sigma-70 region 4 VA249_07750 IPR012845 RNA polymerase sigma factor, FliA/WhiG VA249_07750 IPR013324 RNA polymerase sigma factor, region 3/4-like VA249_07750 IPR028617 RNA polymerase sigma factor FliA VA249_07750 IPR013325 RNA polymerase sigma factor, region 2 VA249_07760 IPR011006 CheY-like superfamily VA249_07760 IPR001789 Signal transduction response regulator, receiver domain VA249_07770 IPR007439 Chemotaxis phosphatase, CheZ VA249_07780 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain VA249_07780 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VA249_07780 IPR004105 Histidine kinase CheA-like, homodimeric domain VA249_07780 IPR036641 HPT domain superfamily VA249_07780 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily VA249_07780 IPR005467 Histidine kinase domain VA249_07780 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VA249_07780 IPR001789 Signal transduction response regulator, receiver domain VA249_07780 IPR011006 CheY-like superfamily VA249_07780 IPR002545 CheW-like domain VA249_07780 IPR036061 CheW-like domain superfamily VA249_07780 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily VA249_07780 IPR003594 Histidine kinase/HSP90-like ATPase VA249_07790 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type VA249_07790 IPR035909 Methylesterase CheB, C-terminal VA249_07790 IPR011006 CheY-like superfamily VA249_07790 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase VA249_07790 IPR001789 Signal transduction response regulator, receiver domain VA249_07800 IPR025669 AAA domain VA249_07800 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_07820 IPR002545 CheW-like domain VA249_07820 IPR039315 Chemotaxis protein CheW VA249_07820 IPR036061 CheW-like domain superfamily VA249_07840 IPR003593 AAA+ ATPase domain VA249_07840 IPR003439 ABC transporter-like VA249_07840 IPR017871 ABC transporter, conserved site VA249_07840 IPR005895 ABC transporter, haem export, CcmA VA249_07840 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_07850 IPR003544 Cytochrome c-type biogenesis protein CcmB VA249_07850 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria VA249_07860 IPR002541 Cytochrome c assembly protein VA249_07860 IPR003557 Cytochrome c-type biogenesis protein CcmC VA249_07880 IPR036127 CcmE-like superfamily VA249_07880 IPR004329 CcmE/CycJ protein VA249_07890 IPR002541 Cytochrome c assembly protein VA249_07890 IPR003567 Cytochrome c-type biogenesis protein VA249_07890 IPR003568 Cytochrome c-type biogenesis protein CcmF VA249_07890 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal VA249_07900 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE VA249_07900 IPR013740 Redoxin VA249_07900 IPR036249 Thioredoxin-like superfamily VA249_07900 IPR017937 Thioredoxin, conserved site VA249_07900 IPR013766 Thioredoxin domain VA249_07910 IPR019734 Tetratricopeptide repeat VA249_07910 IPR011990 Tetratricopeptide-like helical domain superfamily VA249_07910 IPR005616 CcmH/CycL/Ccl2/NrfF family VA249_07910 IPR017560 Cytochrome c-type biogenesis protein CcmI VA249_07910 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily VA249_07910 IPR013026 Tetratricopeptide repeat-containing domain VA249_07920 IPR019734 Tetratricopeptide repeat VA249_07920 IPR005616 CcmH/CycL/Ccl2/NrfF family VA249_07920 IPR013026 Tetratricopeptide repeat-containing domain VA249_07920 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily VA249_07920 IPR011990 Tetratricopeptide-like helical domain superfamily VA249_07930 IPR007428 MlaA lipoprotein VA249_07940 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) VA249_07940 IPR042117 OMPP1/FadL/TodX superfamily VA249_07950 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) VA249_07950 IPR042117 OMPP1/FadL/TodX superfamily VA249_07970 IPR013324 RNA polymerase sigma factor, region 3/4-like VA249_07970 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_07970 IPR013325 RNA polymerase sigma factor, region 2 VA249_07970 IPR014284 RNA polymerase sigma-70 like domain VA249_07970 IPR007627 RNA polymerase sigma-70 region 2 VA249_07970 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site VA249_07970 IPR039425 RNA polymerase sigma-70 like VA249_07970 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 VA249_07980 IPR012806 Acetyl-CoA C-acyltransferase FadI VA249_07980 IPR002155 Thiolase VA249_07980 IPR016039 Thiolase-like VA249_07980 IPR020617 Thiolase, C-terminal VA249_07980 IPR020613 Thiolase, conserved site VA249_07980 IPR020616 Thiolase, N-terminal VA249_07990 IPR036291 NAD(P)-binding domain superfamily VA249_07990 IPR012802 Fatty oxidation complex, alpha subunit FadJ VA249_07990 IPR001753 Enoyl-CoA hydratase/isomerase VA249_07990 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site VA249_07990 IPR029045 ClpP/crotonase-like domain superfamily VA249_07990 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding VA249_07990 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site VA249_07990 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal VA249_07990 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily VA249_08010 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like VA249_08010 IPR011765 Peptidase M16, N-terminal VA249_08010 IPR001431 Peptidase M16, zinc-binding site VA249_08010 IPR007863 Peptidase M16, C-terminal VA249_08010 IPR032632 Peptidase M16, middle/third domain VA249_08020 IPR013078 Histidine phosphatase superfamily, clade-1 VA249_08020 IPR029033 Histidine phosphatase superfamily VA249_08020 IPR004449 Phosphohistidine phosphatase SixA VA249_08030 IPR022990 Uncharacterised protein family UPF0115 VA249_08030 IPR002625 Smr domain VA249_08030 IPR036063 Smr domain superfamily VA249_08040 IPR004556 Methyltransferase HemK-like VA249_08040 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific VA249_08040 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase VA249_08040 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VA249_08040 IPR007848 Methyltransferase small domain VA249_08040 IPR002052 DNA methylase, N-6 adenine-specific, conserved site VA249_08050 IPR000453 Chorismate synthase VA249_08050 IPR035904 Chorismate synthase AroC superfamily VA249_08050 IPR020541 Chorismate synthase, conserved site VA249_08060 IPR005115 Uncharacterised domain UPF0126 VA249_08070 IPR007411 Elongation factor P hydroxylase VA249_08080 IPR014987 Uncharacterised protein family YfcL VA249_08090 IPR005025 NADPH-dependent FMN reductase-like VA249_08090 IPR029039 Flavoprotein-like superfamily VA249_08100 IPR006076 FAD dependent oxidoreductase VA249_08100 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal VA249_08100 IPR008471 MnmC-like methyltransferase VA249_08100 IPR036188 FAD/NAD(P)-binding domain superfamily VA249_08100 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC VA249_08110 IPR000794 Beta-ketoacyl synthase VA249_08110 IPR018201 Beta-ketoacyl synthase, active site VA249_08110 IPR014031 Beta-ketoacyl synthase, C-terminal VA249_08110 IPR014030 Beta-ketoacyl synthase, N-terminal VA249_08110 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain VA249_08110 IPR016039 Thiolase-like VA249_08120 IPR005119 LysR, substrate-binding VA249_08120 IPR037416 Nodulation protein D, PBP2 VA249_08120 IPR000847 Transcription regulator HTH, LysR VA249_08120 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_08120 IPR036390 Winged helix DNA-binding domain superfamily VA249_08130 IPR010917 TonB-dependent receptor, conserved site VA249_08130 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily VA249_08130 IPR010916 TonB box, conserved site VA249_08130 IPR012910 TonB-dependent receptor, plug domain VA249_08130 IPR039426 Vitamin B12 transporter BtuB-like VA249_08130 IPR000531 TonB-dependent receptor-like, beta-barrel VA249_08130 IPR037066 TonB-dependent receptor, plug domain superfamily VA249_08150 IPR021570 LamB-type porin N-terminal domain VA249_08150 IPR003192 Porin, LamB-type VA249_08150 IPR036998 Porin, LamB-type superfamily VA249_08160 IPR000843 LacI-type HTH domain VA249_08160 IPR010982 Lambda repressor-like, DNA-binding domain superfamily VA249_08160 IPR028082 Periplasmic binding protein-like I VA249_08170 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site VA249_08170 IPR003352 Phosphotransferase system, EIIC VA249_08170 IPR013013 Phosphotransferase system, EIIC component, type 1 VA249_08170 IPR001996 Phosphotransferase system, IIB component, type 1 VA249_08170 IPR010973 Phosphotransferase system, sucrose-specific IIBC component VA249_08170 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component VA249_08170 IPR036878 Glucose permease domain IIB VA249_08180 IPR029056 Ribokinase-like VA249_08180 IPR002139 Ribokinase/fructokinase VA249_08180 IPR011611 Carbohydrate kinase PfkB VA249_08180 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site VA249_08190 IPR013189 Glycosyl hydrolase family 32, C-terminal VA249_08190 IPR006232 Sucrose-6-phosphate hydrolase VA249_08190 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily VA249_08190 IPR018053 Glycoside hydrolase, family 32, active site VA249_08190 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily VA249_08190 IPR001362 Glycoside hydrolase, family 32 VA249_08190 IPR013148 Glycosyl hydrolase family 32, N-terminal VA249_08200 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VA249_08200 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain VA249_08200 IPR020921 Erythronate-4-phosphate dehydrogenase VA249_08200 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain VA249_08200 IPR036291 NAD(P)-binding domain superfamily VA249_08200 IPR038251 PdxB, dimerisation domain superfamily VA249_08200 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VA249_08210 IPR012280 Semialdehyde dehydrogenase, dimerisation domain VA249_08210 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site VA249_08210 IPR012080 Aspartate-semialdehyde dehydrogenase VA249_08210 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type VA249_08210 IPR036291 NAD(P)-binding domain superfamily VA249_08210 IPR000534 Semialdehyde dehydrogenase, NAD-binding VA249_08230 IPR020103 Pseudouridine synthase, catalytic domain superfamily VA249_08230 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain VA249_08230 IPR020095 Pseudouridine synthase I, TruA, C-terminal VA249_08230 IPR001406 Pseudouridine synthase I, TruA VA249_08240 IPR041010 Acetyl-coA carboxylase zinc finger domain VA249_08240 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal VA249_08240 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit VA249_08240 IPR034733 Acetyl-CoA carboxylase VA249_08240 IPR029045 ClpP/crotonase-like domain superfamily VA249_08250 IPR036615 Mur ligase, C-terminal domain superfamily VA249_08250 IPR001645 Folylpolyglutamate synthetase VA249_08250 IPR018109 Folylpolyglutamate synthetase, conserved site VA249_08250 IPR036565 Mur-like, catalytic domain superfamily VA249_08250 IPR004101 Mur ligase, C-terminal VA249_08250 IPR013221 Mur ligase, central VA249_08260 IPR036680 Sporulation-like domain superfamily VA249_08260 IPR032898 Cell division protein DedD VA249_08260 IPR007730 Sporulation-like domain VA249_08270 IPR003825 Colicin V production, CvpA VA249_08280 IPR017932 Glutamine amidotransferase type 2 domain VA249_08280 IPR035584 Amidophosphoribosyltransferase, N-terminal VA249_08280 IPR005854 Amidophosphoribosyltransferase VA249_08280 IPR029057 Phosphoribosyltransferase-like VA249_08280 IPR000836 Phosphoribosyltransferase domain VA249_08280 IPR029055 Nucleophile aminohydrolases, N-terminal VA249_08290 IPR005119 LysR, substrate-binding VA249_08290 IPR000847 Transcription regulator HTH, LysR VA249_08290 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_08290 IPR036390 Winged helix DNA-binding domain superfamily VA249_08300 IPR011006 CheY-like superfamily VA249_08300 IPR039420 Transcriptional regulatory protein WalR-like VA249_08300 IPR036457 PPM-type phosphatase domain superfamily VA249_08300 IPR028616 Regulator of RpoS VA249_08300 IPR001789 Signal transduction response regulator, receiver domain VA249_08310 IPR007401 Protein of unknown function DUF454 VA249_08320 IPR005764 Adenine phosphoribosyl transferase VA249_08320 IPR000836 Phosphoribosyltransferase domain VA249_08320 IPR029057 Phosphoribosyltransferase-like VA249_08330 IPR021029 DNA polymerase III, tau subunit, domain V VA249_08330 IPR012763 DNA polymerase III, subunit gamma/ tau VA249_08330 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal VA249_08330 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily VA249_08330 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_08330 IPR003593 AAA+ ATPase domain VA249_08330 IPR022754 DNA polymerase III, gamma subunit, domain III VA249_08340 IPR004401 Nucleoid-associated protein YbaB/EbfC family VA249_08340 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily VA249_08350 IPR023628 Recombination protein RecR, C4-type zinc finger VA249_08350 IPR023627 Recombination protein RecR VA249_08350 IPR000093 DNA recombination protein RecR VA249_08350 IPR015967 Recombination protein RecR, conserved site VA249_08350 IPR006171 TOPRIM domain VA249_08350 IPR034137 RecR, TOPRIM domain VA249_08360 IPR023271 Aquaporin-like VA249_08360 IPR034294 Aquaporin transporter VA249_08360 IPR023743 Aquaporin Z VA249_08360 IPR000425 Major intrinsic protein VA249_08360 IPR022357 Major intrinsic protein, conserved site VA249_08370 IPR005358 Putative zinc- or iron-chelating domain containing protein VA249_08380 IPR005358 Putative zinc- or iron-chelating domain containing protein VA249_08380 IPR008228 Uncharacterised conserved protein UCP006173 VA249_08390 IPR007341 Transglycosylase-associated protein VA249_08400 IPR006037 Regulator of K+ conductance, C-terminal VA249_08400 IPR006512 YidE/YbjL duplication VA249_08400 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily VA249_08410 IPR006037 Regulator of K+ conductance, C-terminal VA249_08410 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily VA249_08410 IPR006512 YidE/YbjL duplication VA249_08420 IPR010107 Glutamate decarboxylase VA249_08420 IPR002129 Pyridoxal phosphate-dependent decarboxylase VA249_08420 IPR015424 Pyridoxal phosphate-dependent transferase VA249_08420 IPR015421 Pyridoxal phosphate-dependent transferase, major domain VA249_08430 IPR023408 Mechanosensitive ion channel MscS domain superfamily VA249_08430 IPR010920 LSM domain superfamily VA249_08430 IPR006685 Mechanosensitive ion channel MscS VA249_08430 IPR011066 Mechanosensitive ion channel MscS, C-terminal VA249_08430 IPR006686 Mechanosensitive ion channel MscS, conserved site VA249_08430 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 VA249_08430 IPR008910 Conserved TM helix VA249_08450 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme VA249_08450 IPR023927 2,3-diaminopropionate biosynthesis protein SbnA VA249_08450 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site VA249_08450 IPR001926 Pyridoxal-phosphate dependent enzyme VA249_08460 IPR036390 Winged helix DNA-binding domain superfamily VA249_08460 IPR011991 ArsR-like helix-turn-helix domain VA249_08460 IPR000485 AsnC-type HTH domain VA249_08460 IPR011008 Dimeric alpha-beta barrel VA249_08460 IPR019888 Transcription regulator AsnC-type VA249_08460 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VA249_08460 IPR019885 Transcription regulator HTH, AsnC-type, conserved site VA249_08460 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_08470 IPR029069 HotDog domain superfamily VA249_08470 IPR003703 Acyl-CoA thioesterase VA249_08480 IPR039366 YscW/ExsB VA249_08490 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain VA249_08490 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_08490 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding VA249_08510 IPR000160 GGDEF domain VA249_08510 IPR029787 Nucleotide cyclase VA249_08510 IPR007894 MASE2 VA249_08520 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VA249_08520 IPR001537 tRNA/rRNA methyltransferase, SpoU type VA249_08520 IPR029064 50S ribosomal protein L30e-like VA249_08520 IPR029028 Alpha/beta knot methyltransferases VA249_08520 IPR013123 RNA 2-O ribose methyltransferase, substrate binding VA249_08530 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VA249_08530 IPR000813 7Fe ferredoxin VA249_08530 IPR022569 Ferredoxin, C-terminal VA249_08530 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VA249_08540 IPR036188 FAD/NAD(P)-binding domain superfamily VA249_08540 IPR028348 FAD dependent protein VA249_08550 IPR015875 IMP dehydrogenase / GMP reductase, conserved site VA249_08550 IPR001093 IMP dehydrogenase/GMP reductase VA249_08550 IPR013785 Aldolase-type TIM barrel VA249_08550 IPR000644 CBS domain VA249_08550 IPR005990 Inosine-5'-monophosphate dehydrogenase VA249_08560 IPR002528 Multi antimicrobial extrusion protein VA249_08570 IPR023299 P-type ATPase, cytoplasmic domain N VA249_08570 IPR023298 P-type ATPase, transmembrane domain superfamily VA249_08570 IPR008250 P-type ATPase, A domain superfamily VA249_08570 IPR018303 P-type ATPase, phosphorylation site VA249_08570 IPR036412 HAD-like superfamily VA249_08570 IPR023214 HAD superfamily VA249_08570 IPR017969 Heavy-metal-associated, conserved site VA249_08570 IPR006121 Heavy metal-associated domain, HMA VA249_08570 IPR036163 Heavy metal-associated domain superfamily VA249_08570 IPR027256 P-type ATPase, subfamily IB VA249_08570 IPR001757 P-type ATPase VA249_08580 IPR035994 Nucleoside phosphorylase superfamily VA249_08580 IPR010058 Uridine phosphorylase VA249_08580 IPR000845 Nucleoside phosphorylase domain VA249_08580 IPR018016 Nucleoside phosphorylase, conserved site VA249_08600 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VA249_08600 IPR004090 Chemotaxis methyl-accepting receptor VA249_08600 IPR003660 HAMP domain VA249_08610 IPR036265 HIT-like superfamily VA249_08610 IPR011146 HIT-like domain VA249_08610 IPR001310 Histidine triad (HIT) protein VA249_08610 IPR019808 Histidine triad, conserved site VA249_08640 IPR012640 Membrane lipoprotein, lipid attachment site VA249_08640 IPR014094 Penicillin-binding protein activator LpoB VA249_08660 IPR029058 Alpha/Beta hydrolase fold VA249_08660 IPR022987 Uncharacterised protein family UPF0227 VA249_08660 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA VA249_08670 IPR036188 FAD/NAD(P)-binding domain superfamily VA249_08670 IPR023753 FAD/NAD(P)-binding domain VA249_08700 IPR005118 Transcription-repair-coupling factor, C-terminal domain VA249_08700 IPR041471 UvrB, interaction domain VA249_08700 IPR004576 Transcription-repair coupling factor VA249_08700 IPR001650 Helicase, C-terminal VA249_08700 IPR011545 DEAD/DEAH box helicase domain VA249_08700 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_08700 IPR003711 CarD-like/TRCF domain VA249_08700 IPR036101 CarD-like/TRCF domain superfamily VA249_08700 IPR014001 Helicase superfamily 1/2, ATP-binding domain VA249_08700 IPR037235 TRCF-like, C-terminal domain VA249_08720 IPR025857 MacB-like periplasmic core domain VA249_08720 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E VA249_08720 IPR003838 ABC transporter permease protein domain VA249_08730 IPR011924 Lipoprotein releasing system, ATP-binding protein VA249_08730 IPR003593 AAA+ ATPase domain VA249_08730 IPR003439 ABC transporter-like VA249_08730 IPR017871 ABC transporter, conserved site VA249_08730 IPR015854 ABC transporter, lipoprotein release, LolD VA249_08730 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_08740 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E VA249_08740 IPR025857 MacB-like periplasmic core domain VA249_08740 IPR003838 ABC transporter permease protein domain VA249_08740 IPR011926 Lipoprotein-releasing system transmembrane protein LolE, gammaproteobacteria type VA249_08760 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VA249_08760 IPR001279 Metallo-beta-lactamase VA249_08760 IPR004797 Competence protein ComEC/Rec2 VA249_08760 IPR004477 ComEC/Rec2-related protein VA249_08760 IPR035681 ComA-like, MBL domain VA249_08770 IPR003593 AAA+ ATPase domain VA249_08770 IPR011527 ABC transporter type 1, transmembrane domain VA249_08770 IPR003439 ABC transporter-like VA249_08770 IPR039421 Type I protein exporter VA249_08770 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_08770 IPR036640 ABC transporter type 1, transmembrane domain superfamily VA249_08770 IPR017871 ABC transporter, conserved site VA249_08770 IPR011917 ABC transporter, lipid A export, MsbA VA249_08780 IPR003758 Tetraacyldisaccharide 4'-kinase VA249_08780 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_08790 IPR005651 Trm112-like VA249_08800 IPR029044 Nucleotide-diphospho-sugar transferases VA249_08800 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase VA249_08800 IPR003329 Acylneuraminate cytidylyltransferase VA249_08810 IPR025161 Putative transposase IS4/IS5 family VA249_08820 IPR025161 Putative transposase IS4/IS5 family VA249_08830 IPR007390 Sporulation stage V, protein R VA249_08840 IPR006698 Uncharacterised protein family UPF0229 VA249_08850 IPR016230 Serine-protein kinase, PrkA VA249_08850 IPR010650 PrkA C-terminal domain VA249_08850 IPR013153 PrkA AAA domain VA249_08850 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_08860 IPR023145 YfbU, helix-hairpin domain superfamily VA249_08860 IPR023146 YfbU, alpha-helical bundle domain superfamily VA249_08860 IPR005587 Uncharacterised protein family UPF0304, YfbU VA249_08880 IPR013785 Aldolase-type TIM barrel VA249_08880 IPR007197 Radical SAM VA249_08880 IPR001989 Radical-activating enzyme, conserved site VA249_08880 IPR034465 Pyruvate formate-lyase activase VA249_08880 IPR012838 Pyruvate formate-lyase 1 activating enzyme VA249_08880 IPR012839 Organic radical enzyme activase VA249_08880 IPR034457 Organic radical-activating enzymes VA249_08900 IPR005949 Formate acetyltransferase VA249_08900 IPR001150 Glycine radical domain VA249_08900 IPR019777 Formate C-acetyltransferase glycine radical, conserved site VA249_08900 IPR004184 Pyruvate formate lyase domain VA249_08930 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_08930 IPR003593 AAA+ ATPase domain VA249_08930 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type VA249_08930 IPR003439 ABC transporter-like VA249_08930 IPR017871 ABC transporter, conserved site VA249_08940 IPR018313 Solute-binding protein family 3, conserved site VA249_08940 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VA249_08940 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter VA249_08950 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain VA249_08950 IPR030199 Histidine transport system permease protein HisQ VA249_08950 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VA249_08950 IPR035906 MetI-like superfamily VA249_08960 IPR035906 MetI-like superfamily VA249_08960 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain VA249_08960 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VA249_08970 IPR020847 AP endonuclease 1, binding site VA249_08970 IPR005135 Endonuclease/exonuclease/phosphatase VA249_08970 IPR004808 AP endonuclease 1 VA249_08970 IPR037493 Exodeoxyribonuclease III-like VA249_08970 IPR020848 AP endonuclease 1, conserved site VA249_08970 IPR036691 Endonuclease/exonuclease/phosphatase superfamily VA249_08980 IPR019630 Protein of unknown function DUF2496, YbaM-related VA249_08990 IPR010890 Primosomal replication PriB/PriC VA249_08990 IPR038338 PriB/PriC superfamily VA249_09000 IPR002781 Transmembrane protein TauE-like VA249_09010 IPR010614 DEAD2 VA249_09010 IPR006555 ATP-dependent helicase, C-terminal VA249_09010 IPR014013 Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type VA249_09010 IPR001650 Helicase, C-terminal VA249_09010 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_09010 IPR039000 ATP-dependent DNA helicase DinG VA249_09030 IPR018635 Uncharacterised protein family UPF0319 VA249_09040 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F VA249_09040 IPR020103 Pseudouridine synthase, catalytic domain superfamily VA249_09040 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain VA249_09040 IPR006145 Pseudouridine synthase, RsuA/RluA VA249_09040 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site VA249_09050 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric VA249_09060 IPR012156 Cold shock, CspA VA249_09060 IPR011129 Cold shock domain VA249_09060 IPR019844 Cold-shock (CSD) domain VA249_09060 IPR002059 Cold-shock protein, DNA-binding VA249_09060 IPR012751 CspD, cold shock VA249_09060 IPR012340 Nucleic acid-binding, OB-fold VA249_09070 IPR022935 ATP-dependent Clp protease adaptor protein ClpS VA249_09070 IPR003769 Adaptor protein ClpS, core VA249_09070 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like VA249_09080 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA VA249_09080 IPR028299 ClpA/B, conserved site 2 VA249_09080 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_09080 IPR041546 ClpA/ClpB, AAA lid domain VA249_09080 IPR018368 ClpA/B, conserved site 1 VA249_09080 IPR001270 ClpA/B family VA249_09080 IPR036628 Clp, N-terminal domain superfamily VA249_09080 IPR004176 Clp, N-terminal VA249_09080 IPR003593 AAA+ ATPase domain VA249_09080 IPR003959 ATPase, AAA-type, core VA249_09080 IPR019489 Clp ATPase, C-terminal VA249_09090 IPR012340 Nucleic acid-binding, OB-fold VA249_09090 IPR006196 RNA-binding domain, S1, IF1 type VA249_09090 IPR022967 RNA-binding domain, S1 VA249_09090 IPR004368 Translation initiation factor IF-1 VA249_09100 IPR007471 N-end aminoacyl transferase, N-terminal VA249_09100 IPR007472 N-end rule aminoacyl transferase, C-terminal VA249_09100 IPR017138 Aspartate/glutamate leucyltransferase VA249_09100 IPR016181 Acyl-CoA N-acyltransferase VA249_09100 IPR030700 N-end rule aminoacyl transferase VA249_09110 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase VA249_09110 IPR042203 Leucyl/phenylalanyl-tRNA-protein transferase, C-terminal VA249_09110 IPR016181 Acyl-CoA N-acyltransferase VA249_09130 IPR001986 Enolpyruvate transferase domain VA249_09130 IPR036968 Enolpyruvate transferase domain superfamily VA249_09130 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase VA249_09130 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site VA249_09130 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta VA249_09140 IPR019633 Protein of unknown function DUF2498 VA249_09140 IPR038191 YciN superfamily VA249_09150 IPR003601 DNA topoisomerase, type IA, domain 2 VA249_09150 IPR034149 DNA topoisomerase 1, TOPRIM domain VA249_09150 IPR006171 TOPRIM domain VA249_09150 IPR028612 DNA topoisomerase I, type IA VA249_09150 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type VA249_09150 IPR005733 DNA topoisomerase I, bacterial-type VA249_09150 IPR000380 DNA topoisomerase, type IA VA249_09150 IPR013498 DNA topoisomerase, type IA, zn finger VA249_09150 IPR023405 DNA topoisomerase, type IA, core domain VA249_09150 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 VA249_09150 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 VA249_09150 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 VA249_09150 IPR013497 DNA topoisomerase, type IA, central VA249_09150 IPR023406 DNA topoisomerase, type IA, active site VA249_09150 IPR003602 DNA topoisomerase, type IA, DNA-binding domain VA249_09170 IPR011004 Trimeric LpxA-like superfamily VA249_09170 IPR029044 Nucleotide-diphospho-sugar transferases VA249_09170 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial VA249_09170 IPR005835 Nucleotidyl transferase domain VA249_09170 IPR005836 ADP-glucose pyrophosphorylase, conserved site VA249_09170 IPR011831 Glucose-1-phosphate adenylyltransferase VA249_09180 IPR001296 Glycosyl transferase, family 1 VA249_09180 IPR011835 Bacterial/plant glycogen synthase VA249_09180 IPR013534 Starch synthase, catalytic domain VA249_09220 IPR007077 TfoX, C-terminal VA249_09220 IPR007076 TfoX, N-terminal VA249_09220 IPR026256 Transcriptional regulator, TfoX/Sxy-type VA249_09240 IPR023588 Transcription regulator HTH, PurR VA249_09240 IPR000843 LacI-type HTH domain VA249_09240 IPR010982 Lambda repressor-like, DNA-binding domain superfamily VA249_09240 IPR028082 Periplasmic binding protein-like I VA249_09250 IPR023069 Chaperone TorD VA249_09250 IPR036411 TorD-like superfamily VA249_09250 IPR036386 HscB, C-terminal domain superfamily VA249_09250 IPR020945 DMSO/Nitrate reductase chaperone VA249_09260 IPR011006 CheY-like superfamily VA249_09260 IPR001867 OmpR/PhoB-type DNA-binding domain VA249_09260 IPR001789 Signal transduction response regulator, receiver domain VA249_09260 IPR039420 Transcriptional regulatory protein WalR-like VA249_09260 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_09270 IPR003848 Domain of unknown function DUF218 VA249_09280 IPR033664 tRNA 5-carboxymethoxyuridine methyltransferase VA249_09280 IPR025714 Methyltransferase domain VA249_09280 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VA249_09290 IPR036390 Winged helix DNA-binding domain superfamily VA249_09290 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_09290 IPR033439 Chromosome partition protein MukF, winged-helix domain VA249_09290 IPR036141 MukF, middle domain superfamily VA249_09290 IPR038198 MukF, C-terminal domain superfamily VA249_09290 IPR033441 Chromosome partition protein MukF, C-terminal domain VA249_09290 IPR005582 Chromosome partition protein MukF VA249_09290 IPR033440 Chromosome partition protein MukF, middle domain VA249_09300 IPR042037 MukE, C-terminal domain VA249_09300 IPR042038 MukE, N-terminal domain VA249_09300 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE VA249_09310 IPR012090 Chromosome partition protein MukB VA249_09310 IPR032520 MukB, hinge domain VA249_09310 IPR007406 MukB, N-terminal domain VA249_09310 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_09350 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX VA249_09350 IPR041107 RimK, PreATP-grasp domain VA249_09350 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK VA249_09350 IPR013815 ATP-grasp fold, subdomain 1 VA249_09350 IPR013651 ATP-grasp fold, RimK-type VA249_09350 IPR011761 ATP-grasp fold VA249_09350 IPR021109 Aspartic peptidase domain superfamily VA249_09360 IPR010017 tRNA U34 carboxymethyltransferase VA249_09360 IPR027555 tRNA (mo5U34)-methyltransferase-like VA249_09360 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VA249_09370 IPR005271 Carboxy-S-adenosyl-L-methionine synthase VA249_09370 IPR041698 Methyltransferase domain 25 VA249_09370 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VA249_09380 IPR002763 Protein of unknown function DUF72 VA249_09380 IPR036520 UPF0759 superfamily VA249_09390 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) VA249_09390 IPR006195 Aminoacyl-tRNA synthetase, class II VA249_09390 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb VA249_09390 IPR004115 GAD-like domain superfamily VA249_09390 IPR029351 GAD domain VA249_09390 IPR012340 Nucleic acid-binding, OB-fold VA249_09390 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type VA249_09390 IPR004524 Aspartate-tRNA ligase, type 1 VA249_09400 IPR012337 Ribonuclease H-like superfamily VA249_09400 IPR036397 Ribonuclease H superfamily VA249_09400 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site VA249_09400 IPR002176 Crossover junction endodeoxyribonuclease RuvC VA249_09410 IPR036267 RuvA, C-terminal domain superfamily VA249_09410 IPR011114 Holliday junction DNA helicase RuvA, C-terminal VA249_09410 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial VA249_09410 IPR000085 Bacterial DNA recombination protein RuvA VA249_09410 IPR010994 RuvA domain 2-like VA249_09410 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 VA249_09410 IPR012340 Nucleic acid-binding, OB-fold VA249_09420 IPR041445 RuvB, AAA lid domain VA249_09420 IPR004605 DNA helicase, Holliday junction RuvB-type VA249_09420 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_09420 IPR008824 RuvB-like P-loop domain VA249_09420 IPR008823 RuvB C-terminal winged helix domain VA249_09420 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_09420 IPR036390 Winged helix DNA-binding domain superfamily VA249_09420 IPR003593 AAA+ ATPase domain VA249_09430 IPR002585 Cytochrome ubiquinol oxidase subunit 1 VA249_09440 IPR003317 Cytochrome ubiquinol oxidase subunit 2 VA249_09460 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase VA249_09460 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family VA249_09460 IPR029069 HotDog domain superfamily VA249_09460 IPR006683 Thioesterase domain VA249_09460 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site VA249_09470 IPR014163 Tol-Pal system, TolQ VA249_09470 IPR002898 MotA/TolQ/ExbB proton channel VA249_09480 IPR003400 Biopolymer transport protein ExbD/TolR VA249_09480 IPR014168 Tol-Pal system protein TolR VA249_09500 IPR011042 Six-bladed beta-propeller, TolB-like VA249_09500 IPR011659 WD40-like Beta Propeller VA249_09500 IPR014167 Tol-Pal system protein TolB VA249_09500 IPR036752 TolB, N-terminal domain superfamily VA249_09500 IPR007195 TolB, N-terminal VA249_09510 IPR006664 Outer membrane protein, bacterial VA249_09510 IPR006665 OmpA-like domain VA249_09510 IPR006690 Outer membrane protein, OmpA-like, conserved site VA249_09510 IPR036737 OmpA-like domain superfamily VA249_09510 IPR039001 Peptidoglycan-associated lipoprotein VA249_09510 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal VA249_09520 IPR019734 Tetratricopeptide repeat VA249_09520 IPR032519 YbgF, trimerisation domain VA249_09520 IPR011990 Tetratricopeptide-like helical domain superfamily VA249_09520 IPR014162 Cell division coordinator CpoB, C-terminal VA249_09520 IPR034706 Cell division coordinator CpoB VA249_09520 IPR013026 Tetratricopeptide repeat-containing domain VA249_09530 IPR003473 Quinolinate synthetase A VA249_09530 IPR036094 Quinolinate synthetase A superfamily VA249_09530 IPR023513 Quinolinate synthase A, type 1 VA249_09560 IPR001789 Signal transduction response regulator, receiver domain VA249_09560 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VA249_09560 IPR029151 Periplasmic sensor-like domain superfamily VA249_09560 IPR015387 LuxQ, periplasmic VA249_09560 IPR003594 Histidine kinase/HSP90-like ATPase VA249_09560 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain VA249_09560 IPR005467 Histidine kinase domain VA249_09560 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VA249_09560 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily VA249_09560 IPR011006 CheY-like superfamily VA249_09570 IPR010574 L-alanine exporter AlaE VA249_09620 IPR013670 EcoEI R protein C-terminal domain VA249_09620 IPR006935 Helicase/UvrB, N-terminal VA249_09620 IPR014001 Helicase superfamily 1/2, ATP-binding domain VA249_09620 IPR001650 Helicase, C-terminal VA249_09620 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_09620 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal VA249_09630 IPR005502 ADP-ribosylation/Crystallin J1 VA249_09630 IPR036705 ADP-ribosylation/Crystallin J1 superfamily VA249_09760 IPR000727 Target SNARE coiled-coil homology domain VA249_09760 IPR029151 Periplasmic sensor-like domain superfamily VA249_09760 IPR033479 Double Cache domain 1 VA249_09760 IPR003660 HAMP domain VA249_09760 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VA249_09780 IPR006143 RND efflux pump, membrane fusion protein VA249_09780 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VA249_09790 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VA249_09790 IPR001036 Acriflavin resistance protein VA249_09790 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 VA249_09840 IPR038377 Sodium/glucose symporter superfamily VA249_09840 IPR001734 Sodium/solute symporter VA249_09880 IPR000620 EamA domain VA249_09890 IPR036397 Ribonuclease H superfamily VA249_09890 IPR012337 Ribonuclease H-like superfamily VA249_09890 IPR006308 DNA polymerase III, alpha subunit, Gram-positive type VA249_09890 IPR003141 Polymerase/histidinol phosphatase, N-terminal VA249_09890 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain VA249_09890 IPR013520 Exonuclease, RNase T/DNA polymerase III VA249_09890 IPR029460 DNA polymerase, helix-hairpin-helix motif VA249_09890 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain VA249_09890 IPR004013 PHP domain VA249_09890 IPR040982 DNA polymerase III alpha subunit finger domain VA249_09900 IPR000644 CBS domain VA249_09910 IPR025161 Putative transposase IS4/IS5 family VA249_09920 IPR008920 Transcription regulator FadR/GntR, C-terminal VA249_09920 IPR011711 GntR, C-terminal VA249_09920 IPR000524 Transcription regulator HTH, GntR VA249_09920 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_09920 IPR036390 Winged helix DNA-binding domain superfamily VA249_09930 IPR011711 GntR, C-terminal VA249_09930 IPR008920 Transcription regulator FadR/GntR, C-terminal VA249_09930 IPR000524 Transcription regulator HTH, GntR VA249_09930 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_09930 IPR036390 Winged helix DNA-binding domain superfamily VA249_09940 IPR002528 Multi antimicrobial extrusion protein VA249_09960 IPR008397 Alginate lyase domain VA249_09960 IPR012480 Heparinase II/III-like VA249_09960 IPR008929 Chondroitin AC/alginate lyase VA249_09970 IPR012480 Heparinase II/III-like VA249_09970 IPR008929 Chondroitin AC/alginate lyase VA249_09970 IPR008397 Alginate lyase domain VA249_09980 IPR014710 RmlC-like jelly roll fold VA249_09980 IPR011051 RmlC-like cupin domain superfamily VA249_09980 IPR013096 Cupin 2, conserved barrel VA249_09980 IPR025499 Pectin degradation protein KdgF VA249_09990 IPR029056 Ribokinase-like VA249_09990 IPR011611 Carbohydrate kinase PfkB VA249_09990 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site VA249_10000 IPR031338 KDPG/KHG aldolase, active site 2 VA249_10000 IPR031337 KDPG/KHG aldolase, active site 1 VA249_10000 IPR013785 Aldolase-type TIM barrel VA249_10000 IPR000887 KDPG/KHG aldolase VA249_10020 IPR025161 Putative transposase IS4/IS5 family VA249_10030 IPR013094 Alpha/beta hydrolase fold-3 VA249_10030 IPR029058 Alpha/Beta hydrolase fold VA249_10040 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain VA249_10040 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site VA249_10040 IPR006398 2-hydroxy-3-oxopropionate reductase VA249_10040 IPR015815 3-hydroxyisobutyrate dehydrogenase-related VA249_10040 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding VA249_10040 IPR036291 NAD(P)-binding domain superfamily VA249_10040 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily VA249_10040 IPR013328 6-phosphogluconate dehydrogenase, domain 2 VA249_10050 IPR010386 tRNA-hydroxylase MiaE VA249_10050 IPR012347 Ferritin-like VA249_10050 IPR009078 Ferritin-like superfamily VA249_10070 IPR036390 Winged helix DNA-binding domain superfamily VA249_10070 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_10070 IPR005119 LysR, substrate-binding VA249_10070 IPR000847 Transcription regulator HTH, LysR VA249_10090 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain VA249_10090 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal VA249_10090 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 VA249_10090 IPR036291 NAD(P)-binding domain superfamily VA249_10090 IPR008141 Alanine dehydrogenase VA249_10100 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_10100 IPR011991 ArsR-like helix-turn-helix domain VA249_10100 IPR000485 AsnC-type HTH domain VA249_10100 IPR019888 Transcription regulator AsnC-type VA249_10100 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VA249_10100 IPR019885 Transcription regulator HTH, AsnC-type, conserved site VA249_10100 IPR036390 Winged helix DNA-binding domain superfamily VA249_10100 IPR011008 Dimeric alpha-beta barrel VA249_10110 IPR025199 DNA translocase FtsK, 4TM region VA249_10110 IPR041027 FtsK alpha domain VA249_10110 IPR002543 FtsK domain VA249_10110 IPR018541 FtsK gamma domain VA249_10110 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_10110 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_10110 IPR036390 Winged helix DNA-binding domain superfamily VA249_10120 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_10120 IPR036390 Winged helix DNA-binding domain superfamily VA249_10120 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_10120 IPR025199 DNA translocase FtsK, 4TM region VA249_10120 IPR018541 FtsK gamma domain VA249_10120 IPR002543 FtsK domain VA249_10120 IPR041027 FtsK alpha domain VA249_10130 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria VA249_10130 IPR004564 Outer membrane lipoprotein carrier protein LolA-like VA249_10130 IPR029046 Lipoprotein localisation LolA/LolB/LppX VA249_10140 IPR021886 MgsA AAA+ ATPase C-terminal VA249_10140 IPR003593 AAA+ ATPase domain VA249_10140 IPR032423 AAA C-terminal domain VA249_10140 IPR003959 ATPase, AAA-type, core VA249_10140 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal VA249_10140 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_10150 IPR033729 Serine-tRNA ligase catalytic core domain VA249_10150 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) VA249_10150 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm VA249_10150 IPR002317 Serine-tRNA ligase, type1 VA249_10150 IPR006195 Aminoacyl-tRNA synthetase, class II VA249_10150 IPR042103 Serine-tRNA synthetase, type1, N-terminal domain superfamily VA249_10150 IPR015866 Serine-tRNA synthetase, type1, N-terminal VA249_10160 IPR000962 Zinc finger, DksA/TraR C4-type VA249_10160 IPR020458 Zinc finger, DksA/TraR C4-type conserved site VA249_10160 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria VA249_10170 IPR005814 Aminotransferase class-III VA249_10170 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA VA249_10170 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 VA249_10170 IPR015424 Pyridoxal phosphate-dependent transferase VA249_10170 IPR015421 Pyridoxal phosphate-dependent transferase, major domain VA249_10180 IPR010722 Biotin and thiamin synthesis-associated domain VA249_10180 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB VA249_10180 IPR024177 Biotin synthase VA249_10180 IPR006638 Elp3/MiaB/NifB VA249_10180 IPR007197 Radical SAM VA249_10180 IPR013785 Aldolase-type TIM barrel VA249_10190 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 VA249_10190 IPR015424 Pyridoxal phosphate-dependent transferase VA249_10190 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site VA249_10190 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria VA249_10190 IPR004839 Aminotransferase, class I/classII VA249_10190 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type VA249_10190 IPR015421 Pyridoxal phosphate-dependent transferase, major domain VA249_10200 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC VA249_10200 IPR013216 Methyltransferase type 11 VA249_10200 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VA249_10210 IPR004472 Dethiobiotin synthase BioD VA249_10210 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_10250 IPR001915 Peptidase M48 VA249_10250 IPR022919 Peptidase M48, protease HtpX, putative VA249_10270 IPR002347 Short-chain dehydrogenase/reductase SDR VA249_10270 IPR020904 Short-chain dehydrogenase/reductase, conserved site VA249_10270 IPR036291 NAD(P)-binding domain superfamily VA249_10300 IPR003333 Mycolic acid cyclopropane synthase VA249_10300 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VA249_10330 IPR016087 Chalcone isomerase VA249_10350 IPR008948 L-Aspartase-like VA249_10350 IPR022761 Fumarate lyase, N-terminal VA249_10350 IPR000362 Fumarate lyase family VA249_10350 IPR013539 Adenylosuccinate lyase PurB, C-terminal VA249_10350 IPR024083 Fumarase/histidase, N-terminal VA249_10350 IPR004769 Adenylosuccinate lyase VA249_10350 IPR020557 Fumarate lyase, conserved site VA249_10360 IPR007451 High frequency lysogenization protein HflD VA249_10360 IPR035932 HflD-like superfamily VA249_10370 IPR023382 Adenine nucleotide alpha hydrolase-like domains VA249_10370 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VA249_10370 IPR004506 tRNA-specific 2-thiouridylase VA249_10390 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site VA249_10390 IPR011611 Carbohydrate kinase PfkB VA249_10390 IPR029056 Ribokinase-like VA249_10400 IPR027454 Histone-like protein H-NS, N-terminal VA249_10400 IPR027444 Histone-like protein H-NS, C-terminal domain VA249_10400 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily VA249_10400 IPR001801 Histone-like protein H-NS VA249_10410 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal VA249_10420 IPR018198 ATP phosphoribosyltransferase, conserved site VA249_10420 IPR001348 ATP phosphoribosyltransferase HisG VA249_10420 IPR020621 ATP phosphoribosyltransferase HisG, long form VA249_10420 IPR013115 Histidine biosynthesis HisG, C-terminal VA249_10420 IPR011322 Nitrogen regulatory PII-like, alpha/beta VA249_10420 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal VA249_10420 IPR013820 ATP phosphoribosyltransferase, catalytic domain VA249_10430 IPR012131 Histidinol dehydrogenase VA249_10430 IPR016161 Aldehyde/histidinol dehydrogenase VA249_10430 IPR001692 Histidinol dehydrogenase, conserved site VA249_10430 IPR022695 Histidinol dehydrogenase, monofunctional VA249_10440 IPR015421 Pyridoxal phosphate-dependent transferase, major domain VA249_10440 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site VA249_10440 IPR004839 Aminotransferase, class I/classII VA249_10440 IPR005861 Histidinol-phosphate aminotransferase family VA249_10440 IPR015424 Pyridoxal phosphate-dependent transferase VA249_10440 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 VA249_10450 IPR006543 Histidinol-phosphate phosphatase VA249_10450 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site VA249_10450 IPR000807 Imidazoleglycerol-phosphate dehydratase VA249_10450 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily VA249_10450 IPR005954 Histidinol-phosphatase VA249_10450 IPR023214 HAD superfamily VA249_10450 IPR013954 Polynucleotide kinase 3 phosphatase VA249_10450 IPR006549 HAD-superfamily hydrolase,subfamily IIIA VA249_10450 IPR036412 HAD-like superfamily VA249_10450 IPR020566 Histidine biosynthesis bifunctional protein HisB VA249_10450 IPR020568 Ribosomal protein S5 domain 2-type fold VA249_10460 IPR010139 Imidazole glycerol phosphate synthase, subunit H VA249_10460 IPR029062 Class I glutamine amidotransferase-like VA249_10460 IPR017926 Glutamine amidotransferase VA249_10470 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA VA249_10470 IPR013785 Aldolase-type TIM barrel VA249_10470 IPR006062 Histidine biosynthesis VA249_10470 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase VA249_10470 IPR011060 Ribulose-phosphate binding barrel VA249_10480 IPR013785 Aldolase-type TIM barrel VA249_10480 IPR006062 Histidine biosynthesis VA249_10480 IPR004651 Histidine biosynthesis, HisF VA249_10480 IPR011060 Ribulose-phosphate binding barrel VA249_10490 IPR023019 Histidine biosynthesis bifunctional protein HisIE VA249_10490 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase VA249_10490 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like VA249_10490 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain VA249_10490 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily VA249_10500 IPR032710 NTF2-like domain superfamily VA249_10500 IPR023006 Uncharacterised protein family UPF0225 VA249_10500 IPR004027 SEC-C motif VA249_10510 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing VA249_10510 IPR001633 EAL domain VA249_10510 IPR035919 EAL domain superfamily VA249_10510 IPR013976 Metal-dependent hydrolase HDOD VA249_10520 IPR029052 Metallo-dependent phosphatase-like VA249_10520 IPR010138 UDP-2,3-diacylglucosamine hydrolase VA249_10520 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type VA249_10530 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain VA249_10530 IPR029000 Cyclophilin-like domain superfamily VA249_10530 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site VA249_10530 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase VA249_10540 IPR015803 Cysteine-tRNA ligase VA249_10540 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding VA249_10540 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VA249_10540 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase VA249_10540 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR VA249_10540 IPR032678 tRNA synthetases class I, catalytic domain VA249_10550 IPR020633 Thymidine kinase, conserved site VA249_10550 IPR001267 Thymidine kinase VA249_10550 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_10560 IPR003848 Domain of unknown function DUF218 VA249_10560 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VA249_10610 IPR023271 Aquaporin-like VA249_10610 IPR000292 Formate/nitrite transporter VA249_10610 IPR024002 Formate/nitrite transporter, conserved site VA249_10610 IPR023999 Formate transporter FocA, putative VA249_10630 IPR005226 UPF0014 family VA249_10640 IPR010649 Nitrate/trimethylamine N-oxide reductase NapE/TorE VA249_10640 IPR004448 Nitrate reductas, NapE, periplasmic VA249_10650 IPR011885 Periplasmic nitrate reductase c-type cytochrome, NapC/NirT VA249_10650 IPR038266 NapC/NirT cytochrome c superfamily VA249_10650 IPR005126 NapC/NirT cytochrome c, N-terminal VA249_10650 IPR024717 Denitrification system component NapC/NirT/NrfH VA249_10650 IPR036280 Multiheme cytochrome superfamily VA249_10650 IPR011031 Multihaem cytochrome VA249_10660 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site VA249_10660 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal VA249_10660 IPR006311 Twin-arginine translocation pathway, signal sequence VA249_10660 IPR011887 Trimethylamine-N-oxide reductase TorA VA249_10660 IPR009010 Aspartate decarboxylase-like domain superfamily VA249_10660 IPR041954 Trimethylamine-N-oxide reductase-like, molybdopterin-binding domain VA249_10660 IPR041460 Molybdopterin oxidoreductase, N-terminal VA249_10660 IPR006657 Molybdopterin dinucleotide-binding domain VA249_10660 IPR006656 Molybdopterin oxidoreductase VA249_10670 IPR002252 Glycoside hydrolase family 36 VA249_10670 IPR038417 Alpha-galactosidase, N-terminal domain superfamily VA249_10670 IPR013785 Aldolase-type TIM barrel VA249_10670 IPR000111 Glycoside hydrolase family 27/36, conserved site VA249_10670 IPR017853 Glycoside hydrolase superfamily VA249_10670 IPR031704 Glycosyl hydrolase family 36, N-terminal VA249_10670 IPR031705 Glycosyl hydrolase family 36, C-terminal VA249_10690 IPR022934 Manganese-dependent inorganic pyrophosphatase, probable VA249_10690 IPR004097 DHHA2 domain VA249_10690 IPR038763 DHH phosphoesterase superfamily VA249_10690 IPR001667 DDH domain VA249_10690 IPR038222 DHHA2 domain superfamily VA249_10710 IPR003439 ABC transporter-like VA249_10710 IPR003593 AAA+ ATPase domain VA249_10710 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_10710 IPR017871 ABC transporter, conserved site VA249_10720 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_10720 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal VA249_10720 IPR003439 ABC transporter-like VA249_10720 IPR003593 AAA+ ATPase domain VA249_10730 IPR035906 MetI-like superfamily VA249_10730 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VA249_10730 IPR025966 Oligopeptide transport permease C-like, N-terminal domain VA249_10740 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VA249_10740 IPR035906 MetI-like superfamily VA249_10750 IPR039424 Solute-binding protein family 5 VA249_10750 IPR023765 Solute-binding protein family 5, conserved site VA249_10750 IPR000914 Solute-binding protein family 5 domain VA249_10750 IPR030678 Peptide/nickel binding protein, MppA-type VA249_10760 IPR025944 Sigma-54 interaction domain, conserved site VA249_10760 IPR003593 AAA+ ATPase domain VA249_10760 IPR009057 Homeobox-like domain superfamily VA249_10760 IPR002197 DNA binding HTH domain, Fis-type VA249_10760 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_10760 IPR002078 RNA polymerase sigma factor 54 interaction domain VA249_10760 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VA249_10760 IPR014317 Transcription activator PspF VA249_10770 IPR014319 Phage shock protein, PspA VA249_10770 IPR007157 PspA/IM30 VA249_10780 IPR009554 Phage shock protein B VA249_10800 IPR005695 Cobalt/zinc/cadmium resistance protein CzcB VA249_10800 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VA249_10800 IPR006143 RND efflux pump, membrane fusion protein VA249_10810 IPR039562 Membrane fusion protein, biotin-lipoyl like domain VA249_10810 IPR022824 Multidrug resistance protein MdtA VA249_10810 IPR006143 RND efflux pump, membrane fusion protein VA249_10820 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VA249_10820 IPR001036 Acriflavin resistance protein VA249_10830 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA VA249_10830 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VA249_10830 IPR001036 Acriflavin resistance protein VA249_10840 IPR004597 DNA-3-methyladenine glycosylase I VA249_10840 IPR011257 DNA glycosylase VA249_10840 IPR005019 Methyladenine glycosylase VA249_10850 IPR015424 Pyridoxal phosphate-dependent transferase VA249_10850 IPR006233 Cystathionine beta-lyase, bacterial VA249_10850 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme VA249_10850 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 VA249_10850 IPR015421 Pyridoxal phosphate-dependent transferase, major domain VA249_10860 IPR022924 Cardiolipin synthase VA249_10860 IPR030840 Cardiolipin synthase A VA249_10860 IPR027379 Cardiolipin synthase N-terminal VA249_10860 IPR025202 Phospholipase D-like domain VA249_10860 IPR001736 Phospholipase D/Transphosphatidylase VA249_10870 IPR000175 Sodium:neurotransmitter symporter VA249_10870 IPR037272 Sodium:neurotransmitter symporter superfamily VA249_10880 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VA249_10880 IPR004090 Chemotaxis methyl-accepting receptor VA249_10880 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain VA249_10880 IPR003660 HAMP domain VA249_10880 IPR000727 Target SNARE coiled-coil homology domain VA249_10890 IPR006145 Pseudouridine synthase, RsuA/RluA VA249_10890 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site VA249_10890 IPR006508 Pseudouridine synthase, RluA-like VA249_10890 IPR020103 Pseudouridine synthase, catalytic domain superfamily VA249_10910 IPR017927 FAD-binding domain, ferredoxin reductase-type VA249_10910 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain VA249_10910 IPR012675 Beta-grasp domain superfamily VA249_10910 IPR036010 2Fe-2S ferredoxin-like superfamily VA249_10910 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain VA249_10910 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VA249_10910 IPR001433 Oxidoreductase FAD/NAD(P)-binding VA249_10910 IPR000951 Phthalate dioxygenase reductase VA249_10910 IPR017938 Riboflavin synthase-like beta-barrel VA249_10920 IPR011254 Prismane-like superfamily VA249_10920 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase VA249_10920 IPR010048 Hydroxylamine reductase VA249_10920 IPR016099 Prismane-like, alpha/beta-sandwich VA249_10920 IPR016100 Prismane, alpha-bundle VA249_10930 IPR003593 AAA+ ATPase domain VA249_10930 IPR025944 Sigma-54 interaction domain, conserved site VA249_10930 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VA249_10930 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VA249_10930 IPR002078 RNA polymerase sigma factor 54 interaction domain VA249_10930 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_10930 IPR009057 Homeobox-like domain superfamily VA249_10930 IPR029016 GAF-like domain superfamily VA249_10930 IPR003018 GAF domain VA249_10930 IPR023944 Anaerobic nitric oxide reductase transcription regulator VA249_10950 IPR000462 CDP-alcohol phosphatidyltransferase VA249_10960 IPR003593 AAA+ ATPase domain VA249_10960 IPR003439 ABC transporter-like VA249_10960 IPR017871 ABC transporter, conserved site VA249_10960 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_10970 IPR035906 MetI-like superfamily VA249_10970 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VA249_10980 IPR006059 Bacterial extracellular solute-binding protein VA249_10980 IPR027020 Protein ynjB VA249_10990 IPR032816 SNARE associated Golgi protein VA249_11010 IPR028261 Dihydroprymidine dehydrogenase domain II VA249_11010 IPR009051 Alpha-helical ferredoxin VA249_11010 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 VA249_11010 IPR023753 FAD/NAD(P)-binding domain VA249_11010 IPR036188 FAD/NAD(P)-binding domain superfamily VA249_11030 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily VA249_11030 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VA249_11030 IPR005467 Histidine kinase domain VA249_11030 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VA249_11030 IPR003594 Histidine kinase/HSP90-like ATPase VA249_11030 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain VA249_11040 IPR001789 Signal transduction response regulator, receiver domain VA249_11040 IPR000792 Transcription regulator LuxR, C-terminal VA249_11040 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_11040 IPR011006 CheY-like superfamily VA249_11070 IPR006146 5'-Nucleotidase, conserved site VA249_11070 IPR008334 5'-Nucleotidase, C-terminal VA249_11070 IPR006179 5'-Nucleotidase/apyrase VA249_11070 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type VA249_11070 IPR029052 Metallo-dependent phosphatase-like VA249_11070 IPR036907 5'-Nucleotidase, C-terminal domain superfamily VA249_11080 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal VA249_11080 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily VA249_11080 IPR020055 Ribosomal protein L25, short-form VA249_11080 IPR029751 Ribosomal protein L25 VA249_11090 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VA249_11090 IPR005467 Histidine kinase domain VA249_11090 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily VA249_11090 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VA249_11090 IPR003594 Histidine kinase/HSP90-like ATPase VA249_11090 IPR003660 HAMP domain VA249_11100 IPR001789 Signal transduction response regulator, receiver domain VA249_11100 IPR011006 CheY-like superfamily VA249_11100 IPR001867 OmpR/PhoB-type DNA-binding domain VA249_11100 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_11100 IPR039420 Transcriptional regulatory protein WalR-like VA249_11100 IPR016032 Signal transduction response regulator, C-terminal effector VA249_11120 IPR006935 Helicase/UvrB, N-terminal VA249_11120 IPR014001 Helicase superfamily 1/2, ATP-binding domain VA249_11120 IPR001650 Helicase, C-terminal VA249_11120 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_11120 IPR011332 Zinc-binding ribosomal protein VA249_11130 IPR006145 Pseudouridine synthase, RsuA/RluA VA249_11130 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain VA249_11130 IPR020103 Pseudouridine synthase, catalytic domain superfamily VA249_11130 IPR036986 RNA-binding S4 domain superfamily VA249_11130 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F VA249_11130 IPR002942 RNA-binding S4 domain VA249_11130 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site VA249_11140 IPR004812 Drug resistance transporter Bcr/CmlA subfamily VA249_11140 IPR020846 Major facilitator superfamily domain VA249_11140 IPR011701 Major facilitator superfamily VA249_11140 IPR004734 Multidrug resistance protein VA249_11140 IPR036259 MFS transporter superfamily VA249_11160 IPR038377 Sodium/glucose symporter superfamily VA249_11160 IPR018212 Sodium/solute symporter, conserved site VA249_11160 IPR001734 Sodium/solute symporter VA249_11170 IPR000111 Glycoside hydrolase family 27/36, conserved site VA249_11170 IPR031704 Glycosyl hydrolase family 36, N-terminal VA249_11170 IPR031705 Glycosyl hydrolase family 36, C-terminal VA249_11170 IPR002252 Glycoside hydrolase family 36 VA249_11170 IPR038417 Alpha-galactosidase, N-terminal domain superfamily VA249_11170 IPR013785 Aldolase-type TIM barrel VA249_11170 IPR017853 Glycoside hydrolase superfamily VA249_11180 IPR028082 Periplasmic binding protein-like I VA249_11180 IPR010982 Lambda repressor-like, DNA-binding domain superfamily VA249_11180 IPR000843 LacI-type HTH domain VA249_11190 IPR021295 Protein of unknown function DUF2867 VA249_11190 IPR016040 NAD(P)-binding domain VA249_11190 IPR036291 NAD(P)-binding domain superfamily VA249_11210 IPR002528 Multi antimicrobial extrusion protein VA249_11220 IPR003593 AAA+ ATPase domain VA249_11220 IPR003439 ABC transporter-like VA249_11220 IPR017871 ABC transporter, conserved site VA249_11220 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_11250 IPR023171 Na/H antiporter domain superfamily VA249_11250 IPR004670 Na+/H+ antiporter NhaA VA249_11260 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily VA249_11260 IPR001647 DNA-binding HTH domain, TetR-type VA249_11260 IPR023772 DNA-binding HTH domain, TetR-type, conserved site VA249_11260 IPR032551 HTH-type transcriptional repressor, C-terminal VA249_11260 IPR009057 Homeobox-like domain superfamily VA249_11270 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily VA249_11270 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily VA249_11270 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal VA249_11270 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal VA249_11270 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal VA249_11270 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain VA249_11270 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type VA249_11280 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative VA249_11280 IPR024906 Enoyl reductase FAD binding domain VA249_11280 IPR010758 Trans-2-enoyl-CoA reductase VA249_11290 IPR023017 Transport protein YbjL, putative VA249_11290 IPR006037 Regulator of K+ conductance, C-terminal VA249_11290 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily VA249_11290 IPR006512 YidE/YbjL duplication VA249_11300 IPR036249 Thioredoxin-like superfamily VA249_11300 IPR011902 Glutaredoxin, GrxA VA249_11300 IPR014025 Glutaredoxin subgroup VA249_11300 IPR002109 Glutaredoxin VA249_11310 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA VA249_11310 IPR018211 Alcohol dehydrogenase, iron-type, conserved site VA249_11310 IPR039697 Iron-type alcohol dehydrogenase-like VA249_11320 IPR000281 Helix-turn-helix protein RpiR VA249_11320 IPR001347 Sugar isomerase (SIS) VA249_11320 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_11320 IPR009057 Homeobox-like domain superfamily VA249_11320 IPR035472 RpiR-like, SIS domain VA249_11330 IPR022517 Aspartate 1-decarboxylase, pyridoxal-dependent VA249_11330 IPR002129 Pyridoxal phosphate-dependent decarboxylase VA249_11330 IPR015424 Pyridoxal phosphate-dependent transferase VA249_11330 IPR015421 Pyridoxal phosphate-dependent transferase, major domain VA249_11350 IPR005642 Lysine exporter LysO VA249_11390 IPR026256 Transcriptional regulator, TfoX/Sxy-type VA249_11390 IPR007076 TfoX, N-terminal VA249_11390 IPR007077 TfoX, C-terminal VA249_11420 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VA249_11420 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain VA249_11420 IPR003594 Histidine kinase/HSP90-like ATPase VA249_11420 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily VA249_11420 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VA249_11420 IPR005467 Histidine kinase domain VA249_11420 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VA249_11440 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site VA249_11440 IPR015424 Pyridoxal phosphate-dependent transferase VA249_11440 IPR022278 Phosphoserine aminotransferase VA249_11440 IPR015421 Pyridoxal phosphate-dependent transferase, major domain VA249_11440 IPR000192 Aminotransferase class V domain VA249_11440 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 VA249_11460 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region VA249_11460 IPR029787 Nucleotide cyclase VA249_11460 IPR000160 GGDEF domain VA249_11490 IPR011527 ABC transporter type 1, transmembrane domain VA249_11490 IPR003593 AAA+ ATPase domain VA249_11490 IPR003439 ABC transporter-like VA249_11490 IPR017871 ABC transporter, conserved site VA249_11490 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_11490 IPR036640 ABC transporter type 1, transmembrane domain superfamily VA249_11490 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC VA249_11500 IPR036640 ABC transporter type 1, transmembrane domain superfamily VA249_11500 IPR011527 ABC transporter type 1, transmembrane domain VA249_11500 IPR003593 AAA+ ATPase domain VA249_11500 IPR003439 ABC transporter-like VA249_11500 IPR017871 ABC transporter, conserved site VA249_11500 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD VA249_11500 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_11500 IPR039421 Type I protein exporter VA249_11510 IPR036188 FAD/NAD(P)-binding domain superfamily VA249_11510 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site VA249_11510 IPR005982 Thioredoxin reductase VA249_11510 IPR023753 FAD/NAD(P)-binding domain VA249_11540 IPR000192 Aminotransferase class V domain VA249_11540 IPR010970 Cysteine desulfurase, SufS VA249_11540 IPR015424 Pyridoxal phosphate-dependent transferase VA249_11540 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 VA249_11540 IPR015421 Pyridoxal phosphate-dependent transferase, major domain VA249_11560 IPR000014 PAS domain VA249_11560 IPR029787 Nucleotide cyclase VA249_11560 IPR000160 GGDEF domain VA249_11560 IPR000700 PAS-associated, C-terminal VA249_11560 IPR035965 PAS domain superfamily VA249_11560 IPR013656 PAS fold-4 VA249_11570 IPR001898 Solute carrier family 13 VA249_11570 IPR031312 Sodium/sulphate symporter, conserved site VA249_11580 IPR003848 Domain of unknown function DUF218 VA249_11580 IPR023604 Uncharacterised protein family SanA VA249_11590 IPR037062 Malic enzyme, N-terminal domain superfamily VA249_11590 IPR012302 Malic enzyme, NAD-binding VA249_11590 IPR001891 Malic oxidoreductase VA249_11590 IPR036291 NAD(P)-binding domain superfamily VA249_11590 IPR023667 NAD-dependent malic enzyme, proteobacteria VA249_11590 IPR015884 Malic enzyme, conserved site VA249_11590 IPR012301 Malic enzyme, N-terminal domain VA249_11600 IPR024590 RNA helicase HrpA, C-terminal VA249_11600 IPR003593 AAA+ ATPase domain VA249_11600 IPR011545 DEAD/DEAH box helicase domain VA249_11600 IPR011709 Domain of unknown function DUF1605 VA249_11600 IPR007502 Helicase-associated domain VA249_11600 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_11600 IPR014001 Helicase superfamily 1/2, ATP-binding domain VA249_11600 IPR001650 Helicase, C-terminal VA249_11600 IPR010222 RNA helicase HrpA VA249_11620 IPR028923 SAICAR synthetase/ADE2, N-terminal VA249_11620 IPR014106 Phosphoribosylaminoimidazole-succinocarboxamide synthase, Vibrio-type VA249_11620 IPR018236 SAICAR synthetase, conserved site VA249_11660 IPR036737 OmpA-like domain superfamily VA249_11660 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VA249_11660 IPR006664 Outer membrane protein, bacterial VA249_11660 IPR006665 OmpA-like domain VA249_11660 IPR006690 Outer membrane protein, OmpA-like, conserved site VA249_11660 IPR008722 Outer membrane porin F, N-terminal VA249_11660 IPR028974 TSP type-3 repeat VA249_11690 IPR016166 FAD-binding domain, PCMH-type VA249_11690 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VA249_11690 IPR004113 FAD-linked oxidase, C-terminal VA249_11690 IPR006094 FAD linked oxidase, N-terminal VA249_11690 IPR009051 Alpha-helical ferredoxin VA249_11690 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VA249_11690 IPR016164 FAD-linked oxidase-like, C-terminal VA249_11690 IPR036318 FAD-binding, type PCMH-like superfamily VA249_11720 IPR024083 Fumarase/histidase, N-terminal VA249_11720 IPR022313 Phenylalanine/histidine ammonia-lyases, active site VA249_11720 IPR001106 Aromatic amino acid lyase VA249_11720 IPR005921 Histidine ammonia-lyase VA249_11720 IPR008948 L-Aspartase-like VA249_11730 IPR036190 Urocanase superfamily VA249_11730 IPR035400 Urocanase, N-terminal domain VA249_11730 IPR023636 Urocanase conserved site VA249_11730 IPR038364 Urocanase, central domain superfamily VA249_11730 IPR035401 Urocanase, C-terminal domain VA249_11730 IPR023637 Urocanase VA249_11730 IPR035085 Urocanase, Rossmann-like domain VA249_11740 IPR023696 Ureohydrolase domain superfamily VA249_11740 IPR006035 Ureohydrolase VA249_11740 IPR005923 Formiminoglutamase VA249_11740 IPR020855 Ureohydrolase, manganese-binding site VA249_11750 IPR032466 Metal-dependent hydrolase VA249_11750 IPR011059 Metal-dependent hydrolase, composite domain superfamily VA249_11750 IPR005920 Imidazolonepropionase VA249_11750 IPR006680 Amidohydrolase-related VA249_11760 IPR011663 UbiC transcription regulator-associated VA249_11760 IPR010248 Histidine utilization repressor VA249_11760 IPR000524 Transcription regulator HTH, GntR VA249_11760 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily VA249_11760 IPR036390 Winged helix DNA-binding domain superfamily VA249_11760 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_11790 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal VA249_11790 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal VA249_11790 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal VA249_11790 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain VA249_11790 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily VA249_11790 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily VA249_11800 IPR033424 Membrane-associated sensor domain VA249_11800 IPR029787 Nucleotide cyclase VA249_11800 IPR000160 GGDEF domain VA249_11810 IPR012676 TGS-like VA249_11810 IPR002320 Threonine-tRNA ligase, class IIa VA249_11810 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily VA249_11810 IPR033728 Threonine-tRNA ligase catalytic core domain VA249_11810 IPR012947 Threonyl/alanyl tRNA synthetase, SAD VA249_11810 IPR012675 Beta-grasp domain superfamily VA249_11810 IPR004154 Anticodon-binding VA249_11810 IPR006195 Aminoacyl-tRNA synthetase, class II VA249_11810 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) VA249_11810 IPR004095 TGS VA249_11810 IPR036621 Anticodon-binding domain superfamily VA249_11820 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily VA249_11820 IPR019814 Translation initiation factor 3, N-terminal VA249_11820 IPR019815 Translation initiation factor 3, C-terminal VA249_11820 IPR001288 Translation initiation factor 3 VA249_11820 IPR019813 Translation initiation factor 3, conserved site VA249_11820 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily VA249_11830 IPR037229 Ribosomal protein L35 superfamily VA249_11830 IPR018265 Ribosomal protein L35, conserved site VA249_11830 IPR021137 Ribosomal protein L35 VA249_11830 IPR001706 Ribosomal protein L35, non-mitochondrial VA249_11840 IPR005813 Ribosomal protein L20 VA249_11840 IPR035566 Ribosomal protein L20, C-terminal VA249_11850 IPR002765 Uncharacterised protein family UPF0145 VA249_11850 IPR035439 UPF0145 domain superfamily VA249_11870 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm VA249_11870 IPR002319 Phenylalanyl-tRNA synthetase VA249_11870 IPR006195 Aminoacyl-tRNA synthetase, class II VA249_11870 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal VA249_11870 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit VA249_11870 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial VA249_11880 IPR005146 B3/B4 tRNA-binding domain VA249_11880 IPR009061 Putative DNA-binding domain superfamily VA249_11880 IPR005121 Ferrodoxin-fold anticodon-binding domain VA249_11880 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily VA249_11880 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 VA249_11880 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit VA249_11880 IPR041616 Phenylalanyl tRNA synthetase beta chain, core domain VA249_11880 IPR012340 Nucleic acid-binding, OB-fold VA249_11880 IPR033714 Phenylalanly tRNA synthetase, tRNA-binding-domain VA249_11880 IPR005147 tRNA synthetase, B5-domain VA249_11880 IPR002547 tRNA-binding domain VA249_11930 IPR022409 PKD/Chitinase domain VA249_11930 IPR014756 Immunoglobulin E-set VA249_11930 IPR017853 Glycoside hydrolase superfamily VA249_11930 IPR001579 Glycoside hydrolase, chitinase active site VA249_11930 IPR001223 Glycoside hydrolase family 18, catalytic domain VA249_11930 IPR013783 Immunoglobulin-like fold VA249_11930 IPR029070 Chitinase insertion domain superfamily VA249_11930 IPR011583 Chitinase II VA249_11930 IPR036573 Carbohydrate-binding module superfamily 5/12 VA249_11930 IPR003610 Carbohydrate-binding module family 5/12 VA249_11930 IPR002126 Cadherin-like VA249_11930 IPR013540 Chitinase A N-terminal VA249_11940 IPR003680 Flavodoxin-like fold VA249_11940 IPR029039 Flavoprotein-like superfamily VA249_11940 IPR023048 NADH-azoreductase, FMN-dependent VA249_11950 IPR011709 Domain of unknown function DUF1605 VA249_11950 IPR024590 RNA helicase HrpA, C-terminal VA249_11950 IPR001650 Helicase, C-terminal VA249_11950 IPR014001 Helicase superfamily 1/2, ATP-binding domain VA249_11950 IPR007502 Helicase-associated domain VA249_11950 IPR011545 DEAD/DEAH box helicase domain VA249_11950 IPR010222 RNA helicase HrpA VA249_11950 IPR003593 AAA+ ATPase domain VA249_11950 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_11970 IPR022913 Multidrug resistance protein MdtK VA249_11970 IPR002528 Multi antimicrobial extrusion protein VA249_11980 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain VA249_11990 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VA249_11990 IPR035906 MetI-like superfamily VA249_12000 IPR003593 AAA+ ATPase domain VA249_12000 IPR003439 ABC transporter-like VA249_12000 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_12000 IPR005892 Glycine betaine transport ATP-binding subunit VA249_12000 IPR000644 CBS domain VA249_12000 IPR017871 ABC transporter, conserved site VA249_12030 IPR000060 BCCT transporter family VA249_12040 IPR016181 Acyl-CoA N-acyltransferase VA249_12040 IPR012772 L-2,4-diaminobutyric acid acetyltransferase VA249_12040 IPR000182 GNAT domain VA249_12050 IPR005814 Aminotransferase class-III VA249_12050 IPR015421 Pyridoxal phosphate-dependent transferase, major domain VA249_12050 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 VA249_12050 IPR015424 Pyridoxal phosphate-dependent transferase VA249_12050 IPR012773 Ectoine biosynthetic protein VA249_12050 IPR004637 2,4-diaminobutyrate 4-transaminase VA249_12060 IPR014710 RmlC-like jelly roll fold VA249_12060 IPR011051 RmlC-like cupin domain superfamily VA249_12060 IPR010462 Ectoine synthase VA249_12070 IPR036393 Acetylglutamate kinase-like superfamily VA249_12070 IPR001048 Aspartate/glutamate/uridylate kinase VA249_12070 IPR027795 CASTOR, ACT domain VA249_12080 IPR036390 Winged helix DNA-binding domain superfamily VA249_12080 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_12080 IPR000847 Transcription regulator HTH, LysR VA249_12080 IPR005119 LysR, substrate-binding VA249_12090 IPR008030 NmrA-like domain VA249_12090 IPR036291 NAD(P)-binding domain superfamily VA249_12120 IPR039562 Membrane fusion protein, biotin-lipoyl like domain VA249_12160 IPR019796 Glucose-6-phosphate dehydrogenase, active site VA249_12160 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal VA249_12160 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding VA249_12160 IPR036291 NAD(P)-binding domain superfamily VA249_12160 IPR001282 Glucose-6-phosphate dehydrogenase VA249_12170 IPR039104 6-Phosphogluconolactonase VA249_12170 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase VA249_12170 IPR037171 NagB/RpiA transferase-like VA249_12170 IPR005900 6-phosphogluconolactonase, DevB-type VA249_12180 IPR036291 NAD(P)-binding domain superfamily VA249_12180 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily VA249_12180 IPR013328 6-phosphogluconate dehydrogenase, domain 2 VA249_12180 IPR006114 6-phosphogluconate dehydrogenase, C-terminal VA249_12180 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating VA249_12180 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding VA249_12180 IPR006184 6-phosphogluconate-binding site VA249_12180 IPR006183 6-phosphogluconate dehydrogenase VA249_12240 IPR002729 CRISPR-associated protein Cas1 VA249_12240 IPR042206 CRISPR-associated endonuclease Cas1, C-terminal domain VA249_12240 IPR042211 CRISPR-associated endonuclease Cas1, N-terminal domain VA249_12330 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VA249_12330 IPR025944 Sigma-54 interaction domain, conserved site VA249_12330 IPR002078 RNA polymerase sigma factor 54 interaction domain VA249_12330 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VA249_12330 IPR002197 DNA binding HTH domain, Fis-type VA249_12330 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_12330 IPR029016 GAF-like domain superfamily VA249_12330 IPR003018 GAF domain VA249_12330 IPR003593 AAA+ ATPase domain VA249_12330 IPR009057 Homeobox-like domain superfamily VA249_12340 IPR016161 Aldehyde/histidinol dehydrogenase VA249_12340 IPR016163 Aldehyde dehydrogenase, C-terminal VA249_12340 IPR016160 Aldehyde dehydrogenase, cysteine active site VA249_12340 IPR029510 Aldehyde dehydrogenase, glutamic acid active site VA249_12340 IPR016162 Aldehyde dehydrogenase, N-terminal VA249_12340 IPR015590 Aldehyde dehydrogenase domain VA249_12350 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VA249_12350 IPR001036 Acriflavin resistance protein VA249_12360 IPR011852 TRAP transporter solute receptor, TAXI family VA249_12370 IPR002781 Transmembrane protein TauE-like VA249_12380 IPR037522 HD-GYP domain VA249_12380 IPR003607 HD/PDEase domain VA249_12390 IPR008920 Transcription regulator FadR/GntR, C-terminal VA249_12390 IPR000524 Transcription regulator HTH, GntR VA249_12390 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_12390 IPR036390 Winged helix DNA-binding domain superfamily VA249_12390 IPR011711 GntR, C-terminal VA249_12400 IPR039556 ICL/PEPM domain VA249_12400 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site VA249_12400 IPR012695 2-methylisocitrate lyase VA249_12400 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily VA249_12400 IPR040442 Pyruvate kinase-like domain superfamily VA249_12410 IPR036969 Citrate synthase superfamily VA249_12410 IPR024176 Citrate synthase, bacterial-type VA249_12410 IPR019810 Citrate synthase active site VA249_12410 IPR002020 Citrate synthase VA249_12410 IPR016143 Citrate synthase-like, small alpha subdomain VA249_12410 IPR016142 Citrate synthase-like, large alpha subdomain VA249_12410 IPR011278 2-methylcitrate synthase/citrate synthase type I VA249_12420 IPR012708 2-methylisocitrate dehydratase AcnD, Fe/S-dependent VA249_12420 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 VA249_12420 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain VA249_12420 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel VA249_12420 IPR006249 Aconitase/Iron-responsive element-binding protein 2 VA249_12420 IPR036008 Aconitase, iron-sulfur domain VA249_12420 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain VA249_12430 IPR012709 2-methyl-aconitate isomerase PrpF VA249_12430 IPR007400 PrpF protein VA249_12440 IPR025110 AMP-binding enzyme, C-terminal domain VA249_12440 IPR020845 AMP-binding, conserved site VA249_12440 IPR000873 AMP-dependent synthetase/ligase VA249_12440 IPR042099 AMP-dependent synthetase-like superfamily VA249_12440 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain VA249_12470 IPR000150 Cof family VA249_12470 IPR036412 HAD-like superfamily VA249_12470 IPR006379 HAD-superfamily hydrolase, subfamily IIB VA249_12470 IPR023214 HAD superfamily VA249_12480 IPR013785 Aldolase-type TIM barrel VA249_12480 IPR027609 Putative 7-carboxy-7-deazaguanine synthase QueE, Proteobacteria VA249_12480 IPR024924 7-carboxy-7-deazaguanine synthase-like VA249_12480 IPR007197 Radical SAM VA249_12490 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VA249_12490 IPR018317 Queuosine biosynthesis protein QueC VA249_12500 IPR039435 Diguanylate cyclase DosC, globin sensor domain VA249_12500 IPR000160 GGDEF domain VA249_12500 IPR009050 Globin-like superfamily VA249_12500 IPR012292 Globin/Protoglobin VA249_12500 IPR029787 Nucleotide cyclase VA249_12550 IPR015947 PUA-like superfamily VA249_12550 IPR002478 PUA domain VA249_12550 IPR019614 S-adenosylmethionine-dependent methyltransferase VA249_12550 IPR036974 PUA domain superfamily VA249_12550 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VA249_12550 IPR041532 RlmI, PUA-like domain VA249_12550 IPR023542 rRNA large subunit methyltransferase I VA249_12560 IPR000727 Target SNARE coiled-coil homology domain VA249_12560 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VA249_12560 IPR003660 HAMP domain VA249_12560 IPR004090 Chemotaxis methyl-accepting receptor VA249_12560 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain VA249_12570 IPR036046 Acylphosphatase-like domain superfamily VA249_12570 IPR001792 Acylphosphatase-like domain VA249_12570 IPR020456 Acylphosphatase VA249_12570 IPR017968 Acylphosphatase, conserved site VA249_12580 IPR025526 DsrC-like domain superfamily VA249_12580 IPR007453 Sulphur transfer protein DsrC/TusE VA249_12580 IPR042072 DsrC-like protein, C-terminal domain VA249_12590 IPR006213 Bax inhibitor 1, conserved site VA249_12590 IPR006214 Bax inhibitor 1-related VA249_12600 IPR003593 AAA+ ATPase domain VA249_12600 IPR003439 ABC transporter-like VA249_12600 IPR017871 ABC transporter, conserved site VA249_12600 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_12600 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type VA249_12610 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain VA249_12610 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VA249_12610 IPR035906 MetI-like superfamily VA249_12620 IPR035906 MetI-like superfamily VA249_12620 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain VA249_12620 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VA249_12630 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter VA249_12630 IPR018313 Solute-binding protein family 3, conserved site VA249_12630 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VA249_12640 IPR035996 Tetrapyrrole methylase superfamily VA249_12640 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site VA249_12640 IPR006367 Sirohaem synthase, N-terminal VA249_12640 IPR000878 Tetrapyrrole methylase VA249_12640 IPR028281 Siroheme synthase, central domain VA249_12640 IPR019478 Sirohaem synthase, dimerisation domain VA249_12640 IPR036291 NAD(P)-binding domain superfamily VA249_12640 IPR006366 Uroporphyrin-III C-methyltransferase VA249_12640 IPR014776 Tetrapyrrole methylase, subdomain 2 VA249_12640 IPR014777 Tetrapyrrole methylase, subdomain 1 VA249_12640 IPR037115 Sirohaem synthase, dimerisation domain superfamily VA249_12640 IPR012409 Sirohaem synthase VA249_12650 IPR007551 Protein of unknown function DUF520 VA249_12650 IPR035571 UPF0234-like, C-terminal VA249_12650 IPR035570 UPF0234, N-terminal VA249_12650 IPR036183 YajQ-like superfamily VA249_12660 IPR006218 DAHP synthetase I/KDSA VA249_12660 IPR006219 DHAP synthase, class 1 VA249_12660 IPR013785 Aldolase-type TIM barrel VA249_12700 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site VA249_12700 IPR031341 Ribosomal RNA small subunit methyltransferase F, N-terminal VA249_12700 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type VA249_12700 IPR027391 rRNA small subunit methyltransferase F, RNA-binding PUA-like domain VA249_12700 IPR011023 Nop2p VA249_12700 IPR023267 RNA (C5-cytosine) methyltransferase VA249_12700 IPR023545 rRNA small subunit methyltransferase F VA249_12700 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VA249_12710 IPR003399 Mce/MlaD VA249_12720 IPR007498 Intermembrane transport protein PqiA-like VA249_12720 IPR011031 Multihaem cytochrome VA249_12720 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type VA249_12730 IPR003593 AAA+ ATPase domain VA249_12730 IPR011527 ABC transporter type 1, transmembrane domain VA249_12730 IPR036640 ABC transporter type 1, transmembrane domain superfamily VA249_12730 IPR003439 ABC transporter-like VA249_12730 IPR017871 ABC transporter, conserved site VA249_12730 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_12730 IPR039421 Type I protein exporter VA249_12740 IPR003018 GAF domain VA249_12740 IPR000614 Free Met sulfoxide reductase conserved site VA249_12740 IPR029016 GAF-like domain superfamily VA249_12760 IPR023529 RNA chaperone ProQ VA249_12760 IPR016103 ProQ/FinO domain VA249_12760 IPR036442 ProQ/FinO domain superfamily VA249_12760 IPR035236 RNA chaperone ProQ, C-terminal VA249_12770 IPR020992 Tail specific protease, C-terminal VA249_12770 IPR005151 Tail specific protease VA249_12770 IPR040573 Tail specific protease, N-terminal domain VA249_12770 IPR036034 PDZ superfamily VA249_12770 IPR001478 PDZ domain VA249_12770 IPR004447 C-terminal-processing peptidase S41A VA249_12770 IPR029045 ClpP/crotonase-like domain superfamily VA249_12790 IPR027268 Peptidase M4/M1, CTD superfamily VA249_12790 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold VA249_12790 IPR037144 Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily VA249_12790 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal VA249_12790 IPR014782 Peptidase M1, membrane alanine aminopeptidase VA249_12790 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase VA249_12790 IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily VA249_12790 IPR012779 Peptidase M1, alanyl aminopeptidase VA249_12790 IPR042097 Aminopeptidase N-like , N-terminal VA249_12800 IPR036291 NAD(P)-binding domain superfamily VA249_12800 IPR028971 NAD-glutamate dehydrogenase VA249_12800 IPR007780 NAD-glutamate dehydrogenase, bacteria VA249_12810 IPR001295 Dihydroorotate dehydrogenase, conserved site VA249_12810 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 VA249_12810 IPR005720 Dihydroorotate dehydrogenase domain VA249_12810 IPR013785 Aldolase-type TIM barrel VA249_12810 IPR005719 Dihydroorotate dehydrogenase, class 2 VA249_12820 IPR009809 Cell division protein ZapC VA249_12830 IPR002052 DNA methylase, N-6 adenine-specific, conserved site VA249_12830 IPR000241 Putative RNA methylase domain VA249_12830 IPR019614 S-adenosylmethionine-dependent methyltransferase VA249_12830 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VA249_12830 IPR004114 THUMP domain VA249_12830 IPR017244 Ribosomal RNA large subunit methyltransferase K/L VA249_12850 IPR032524 ABC transporter Uup, C-terminal VA249_12850 IPR032781 ABC-transporter extension domain VA249_12850 IPR003439 ABC transporter-like VA249_12850 IPR017871 ABC transporter, conserved site VA249_12850 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_12850 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily VA249_12850 IPR003593 AAA+ ATPase domain VA249_12870 IPR007040 Ribosome modulation factor VA249_12870 IPR023200 Ribosome modulation factor domain superfamily VA249_12880 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA VA249_12880 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ VA249_12880 IPR029069 HotDog domain superfamily VA249_12890 IPR008269 Peptidase S16, Lon proteolytic domain VA249_12890 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VA249_12890 IPR020568 Ribosomal protein S5 domain 2-type fold VA249_12890 IPR027065 Lon protease VA249_12890 IPR041699 Lon protease, AAA domain VA249_12900 IPR038339 MatP, N-terminal domain superfamily VA249_12900 IPR035087 MatP, N-terminal VA249_12900 IPR035375 MatP, C-terminal ribbon-helix-helix domain VA249_12900 IPR009390 Macrodomain Ter protein, MatP VA249_12900 IPR013321 Arc-type ribbon-helix-helix VA249_12940 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VA249_12940 IPR001789 Signal transduction response regulator, receiver domain VA249_12940 IPR003594 Histidine kinase/HSP90-like ATPase VA249_12940 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VA249_12940 IPR005467 Histidine kinase domain VA249_12940 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain VA249_12940 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily VA249_12940 IPR015387 LuxQ, periplasmic VA249_12940 IPR035965 PAS domain superfamily VA249_12940 IPR029151 Periplasmic sensor-like domain superfamily VA249_12940 IPR011006 CheY-like superfamily VA249_12970 IPR004677 Cytochrome c oxidase cbb3-type, subunit I VA249_12970 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site VA249_12970 IPR023616 Cytochrome c oxidase-like, subunit I domain VA249_12970 IPR036927 Cytochrome c oxidase-like, subunit I superfamily VA249_12970 IPR000883 Cytochrome c oxidase subunit I VA249_13000 IPR038414 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal domain superfamily VA249_13000 IPR009056 Cytochrome c-like domain VA249_13000 IPR008168 Cytochrome c, class IC VA249_13000 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal VA249_13000 IPR036909 Cytochrome c-like domain superfamily VA249_13000 IPR004678 Cytochrome c oxidase cbb3-type, subunit III VA249_13020 IPR001757 P-type ATPase VA249_13020 IPR027256 P-type ATPase, subfamily IB VA249_13020 IPR036163 Heavy metal-associated domain superfamily VA249_13020 IPR006121 Heavy metal-associated domain, HMA VA249_13020 IPR017969 Heavy-metal-associated, conserved site VA249_13020 IPR023299 P-type ATPase, cytoplasmic domain N VA249_13020 IPR036412 HAD-like superfamily VA249_13020 IPR008250 P-type ATPase, A domain superfamily VA249_13020 IPR023214 HAD superfamily VA249_13020 IPR023298 P-type ATPase, transmembrane domain superfamily VA249_13020 IPR018303 P-type ATPase, phosphorylation site VA249_13050 IPR036390 Winged helix DNA-binding domain superfamily VA249_13050 IPR018335 Transcription regulator HTH, Crp-type, conserved site VA249_13050 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_13050 IPR012318 Crp-type HTH domain VA249_13050 IPR000595 Cyclic nucleotide-binding domain VA249_13050 IPR018490 Cyclic nucleotide-binding-like VA249_13050 IPR014710 RmlC-like jelly roll fold VA249_13060 IPR006016 UspA VA249_13070 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type VA249_13070 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal VA249_13070 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VA249_13070 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase VA249_13110 IPR017879 ABC transporter, spermidine/putrescine import ATP-binding protein, PotA VA249_13110 IPR003439 ABC transporter-like VA249_13110 IPR017871 ABC transporter, conserved site VA249_13110 IPR008995 Molybdate/tungstate binding, C-terminal VA249_13110 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_13110 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit VA249_13110 IPR013611 Transport-associated OB, type 2 VA249_13110 IPR003593 AAA+ ATPase domain VA249_13120 IPR035906 MetI-like superfamily VA249_13120 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VA249_13130 IPR035906 MetI-like superfamily VA249_13130 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VA249_13140 IPR006059 Bacterial extracellular solute-binding protein VA249_13140 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein VA249_13150 IPR006059 Bacterial extracellular solute-binding protein VA249_13150 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein VA249_13160 IPR029035 DHS-like NAD/FAD-binding domain superfamily VA249_13160 IPR003000 Sirtuin family VA249_13160 IPR026591 Sirtuin, catalytic core small domain superfamily VA249_13160 IPR027546 Sirtuin, class III VA249_13160 IPR026590 Sirtuin family, catalytic core domain VA249_13190 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VA249_13190 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VA249_13190 IPR000813 7Fe ferredoxin VA249_13200 IPR006311 Twin-arginine translocation pathway, signal sequence VA249_13200 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site VA249_13200 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site VA249_13200 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain VA249_13200 IPR006656 Molybdopterin oxidoreductase VA249_13200 IPR006657 Molybdopterin dinucleotide-binding domain VA249_13200 IPR006443 Formate dehydrogenase-N, alpha subunit VA249_13200 IPR009010 Aspartate decarboxylase-like domain superfamily VA249_13220 IPR023069 Chaperone TorD VA249_13220 IPR020945 DMSO/Nitrate reductase chaperone VA249_13220 IPR036386 HscB, C-terminal domain superfamily VA249_13220 IPR036411 TorD-like superfamily VA249_13260 IPR003786 Sulfur carrier protein FdhD VA249_13260 IPR016193 Cytidine deaminase-like VA249_13270 IPR003593 AAA+ ATPase domain VA249_13270 IPR032781 ABC-transporter extension domain VA249_13270 IPR003439 ABC transporter-like VA249_13270 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_13300 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VA249_13300 IPR029151 Periplasmic sensor-like domain superfamily VA249_13300 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily VA249_13300 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain VA249_13300 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VA249_13300 IPR003594 Histidine kinase/HSP90-like ATPase VA249_13300 IPR005467 Histidine kinase domain VA249_13310 IPR025944 Sigma-54 interaction domain, conserved site VA249_13310 IPR001789 Signal transduction response regulator, receiver domain VA249_13310 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VA249_13310 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VA249_13310 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_13310 IPR002078 RNA polymerase sigma factor 54 interaction domain VA249_13310 IPR009057 Homeobox-like domain superfamily VA249_13310 IPR011006 CheY-like superfamily VA249_13310 IPR003593 AAA+ ATPase domain VA249_13310 IPR002197 DNA binding HTH domain, Fis-type VA249_13320 IPR024370 PBP domain VA249_13330 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VA249_13330 IPR035906 MetI-like superfamily VA249_13340 IPR013611 Transport-associated OB, type 2 VA249_13340 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_13340 IPR008995 Molybdate/tungstate binding, C-terminal VA249_13340 IPR015853 ABC transporter, ferric cation import, FbpC VA249_13340 IPR017871 ABC transporter, conserved site VA249_13340 IPR003439 ABC transporter-like VA249_13340 IPR003593 AAA+ ATPase domain VA249_13350 IPR029044 Nucleotide-diphospho-sugar transferases VA249_13350 IPR025877 MobA-like NTP transferase VA249_13350 IPR013482 Molybdenum cofactor guanylyltransferase VA249_13360 IPR005111 MoeA, C-terminal, domain IV VA249_13360 IPR038987 Molybdopterin biosynthesis protein MoeA-like VA249_13360 IPR036135 MoeA, N-terminal and linker domain superfamily VA249_13360 IPR036688 MoeA, C-terminal, domain IV superfamily VA249_13360 IPR008284 Molybdenum cofactor biosynthesis, conserved site VA249_13360 IPR005110 MoeA, N-terminal and linker domain VA249_13360 IPR036425 MoaB/Mog-like domain superfamily VA249_13360 IPR001453 MoaB/Mog domain VA249_13380 IPR023505 N-acetyl-D-glucosamine kinase VA249_13380 IPR000600 ROK family VA249_13390 IPR039262 DTW domain-containing protein 2 VA249_13390 IPR005636 DTW VA249_13420 IPR000064 Endopeptidase, NLPC/P60 domain VA249_13420 IPR038765 Papain-like cysteine peptidase superfamily VA249_13440 IPR000160 GGDEF domain VA249_13440 IPR007894 MASE2 VA249_13440 IPR029787 Nucleotide cyclase VA249_13450 IPR001789 Signal transduction response regulator, receiver domain VA249_13450 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase VA249_13450 IPR035909 Methylesterase CheB, C-terminal VA249_13450 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type VA249_13450 IPR011006 CheY-like superfamily VA249_13460 IPR016477 Fructosamine/Ketosamine-3-kinase VA249_13460 IPR011009 Protein kinase-like domain superfamily VA249_13480 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily VA249_13480 IPR001783 Lumazine-binding protein VA249_13480 IPR026017 Lumazine-binding domain VA249_13480 IPR017938 Riboflavin synthase-like beta-barrel VA249_13490 IPR002528 Multi antimicrobial extrusion protein VA249_13530 IPR031161 Peptidase family M60 domain VA249_13530 IPR025385 Domain of unknown function DUF4092 VA249_13530 IPR035423 M60-like domain, N-terminal VA249_13530 IPR042279 Peptidase M60, enhancin-like domain 3 VA249_13540 IPR018357 Hexapeptide transferase, conserved site VA249_13540 IPR039369 Galactoside O-acetyltransferase LacA-like VA249_13540 IPR024688 Maltose/galactoside acetyltransferase VA249_13540 IPR011004 Trimeric LpxA-like superfamily VA249_13540 IPR001451 Hexapeptide repeat VA249_13570 IPR000620 EamA domain VA249_13570 IPR004779 Carboxylate/Amino Acid/Amine Transporter VA249_13580 IPR005325 Protein of unknown function DUF308, membrane VA249_13590 IPR010920 LSM domain superfamily VA249_13590 IPR006685 Mechanosensitive ion channel MscS VA249_13590 IPR011066 Mechanosensitive ion channel MscS, C-terminal VA249_13590 IPR030192 Miniconductance mechanosensitive channel YbdG VA249_13600 IPR029132 Choloylglycine hydrolase/NAAA C-terminal VA249_13600 IPR029055 Nucleophile aminohydrolases, N-terminal VA249_13610 IPR006016 UspA VA249_13630 IPR029151 Periplasmic sensor-like domain superfamily VA249_13630 IPR035965 PAS domain superfamily VA249_13630 IPR015387 LuxQ, periplasmic VA249_13630 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain VA249_13630 IPR001789 Signal transduction response regulator, receiver domain VA249_13630 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily VA249_13630 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VA249_13630 IPR005467 Histidine kinase domain VA249_13630 IPR003594 Histidine kinase/HSP90-like ATPase VA249_13630 IPR011006 CheY-like superfamily VA249_13630 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VA249_13640 IPR002645 STAS domain VA249_13640 IPR014237 Anti-sigma F factor antagonist VA249_13640 IPR003658 Anti-sigma factor antagonist VA249_13640 IPR036513 STAS domain superfamily VA249_13690 IPR009057 Homeobox-like domain superfamily VA249_13690 IPR003593 AAA+ ATPase domain VA249_13690 IPR011006 CheY-like superfamily VA249_13690 IPR002197 DNA binding HTH domain, Fis-type VA249_13690 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_13690 IPR001789 Signal transduction response regulator, receiver domain VA249_13690 IPR002078 RNA polymerase sigma factor 54 interaction domain VA249_13690 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VA249_13690 IPR025944 Sigma-54 interaction domain, conserved site VA249_13700 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain VA249_13700 IPR001296 Glycosyl transferase, family 1 VA249_13750 IPR018357 Hexapeptide transferase, conserved site VA249_13750 IPR039369 Galactoside O-acetyltransferase LacA-like VA249_13750 IPR024688 Maltose/galactoside acetyltransferase VA249_13750 IPR011004 Trimeric LpxA-like superfamily VA249_13750 IPR001451 Hexapeptide repeat VA249_13770 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_13770 IPR003856 Polysaccharide chain length determinant N-terminal domain VA249_13770 IPR032807 Tyrosine kinase, G-rich domain VA249_13770 IPR025669 AAA domain VA249_13770 IPR005702 Exopolysaccharide synthesis protein VA249_13780 IPR001296 Glycosyl transferase, family 1 VA249_13780 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain VA249_13800 IPR003362 Bacterial sugar transferase VA249_13800 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase VA249_13840 IPR041549 Immunomodulating metalloprotease helical domain VA249_13840 IPR040711 Immunomodulating metalloprotease N-terminal domain VA249_13840 IPR031161 Peptidase family M60 domain VA249_13870 IPR034333 Glutathione S-transferases, class Zeta , N-terminal VA249_13870 IPR034330 Glutathione S-transferases, class Zeta , C-terminal VA249_13870 IPR005955 Glutathione S-transferases, class Zeta VA249_13870 IPR004046 Glutathione S-transferase, C-terminal VA249_13870 IPR036249 Thioredoxin-like superfamily VA249_13870 IPR040079 Glutathione Transferase family VA249_13870 IPR036282 Glutathione S-transferase, C-terminal domain superfamily VA249_13870 IPR010987 Glutathione S-transferase, C-terminal-like VA249_13870 IPR004045 Glutathione S-transferase, N-terminal VA249_13890 IPR005708 Homogentisate 1,2-dioxygenase VA249_13890 IPR014710 RmlC-like jelly roll fold VA249_13890 IPR011051 RmlC-like cupin domain superfamily VA249_13900 IPR037523 Vicinal oxygen chelate (VOC) domain VA249_13900 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VA249_13900 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VA249_13900 IPR041735 4-hydroxyphenylpyruvate dioxygenase, C-terminal VA249_13900 IPR005956 4-hydroxyphenylpyruvate dioxygenase VA249_13900 IPR041736 4-hydroxyphenylpyruvate dioxygenase, N-terminal VA249_13970 IPR013108 Amidohydrolase 3 VA249_13970 IPR011059 Metal-dependent hydrolase, composite domain superfamily VA249_13970 IPR032466 Metal-dependent hydrolase VA249_13970 IPR033932 YtcJ like VA249_14010 IPR002933 Peptidase M20 VA249_14010 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site VA249_14010 IPR036264 Bacterial exopeptidase dimerisation domain VA249_14010 IPR010162 Peptidase M20B, peptidase T-like VA249_14010 IPR008007 Peptidase M42 VA249_14010 IPR011650 Peptidase M20, dimerisation domain VA249_14050 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_14050 IPR000847 Transcription regulator HTH, LysR VA249_14050 IPR005119 LysR, substrate-binding VA249_14050 IPR036390 Winged helix DNA-binding domain superfamily VA249_14060 IPR011701 Major facilitator superfamily VA249_14060 IPR036259 MFS transporter superfamily VA249_14060 IPR020846 Major facilitator superfamily domain VA249_14070 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VA249_14070 IPR037523 Vicinal oxygen chelate (VOC) domain VA249_14080 IPR036390 Winged helix DNA-binding domain superfamily VA249_14080 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_14080 IPR005119 LysR, substrate-binding VA249_14080 IPR000847 Transcription regulator HTH, LysR VA249_14120 IPR037523 Vicinal oxygen chelate (VOC) domain VA249_14120 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VA249_14190 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VA249_14190 IPR035906 MetI-like superfamily VA249_14200 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VA249_14200 IPR035906 MetI-like superfamily VA249_14210 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit VA249_14210 IPR013611 Transport-associated OB, type 2 VA249_14210 IPR008995 Molybdate/tungstate binding, C-terminal VA249_14210 IPR017871 ABC transporter, conserved site VA249_14210 IPR003439 ABC transporter-like VA249_14210 IPR017879 ABC transporter, spermidine/putrescine import ATP-binding protein, PotA VA249_14210 IPR003593 AAA+ ATPase domain VA249_14210 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_14220 IPR013785 Aldolase-type TIM barrel VA249_14220 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA VA249_14220 IPR002220 DapA-like VA249_14220 IPR020625 Schiff base-forming aldolase, active site VA249_14220 IPR020624 Schiff base-forming aldolase, conserved site VA249_14230 IPR023401 Ornithine cyclodeaminase, N-terminal VA249_14230 IPR036291 NAD(P)-binding domain superfamily VA249_14230 IPR003462 Ornithine cyclodeaminase/mu-crystallin VA249_14250 IPR006076 FAD dependent oxidoreductase VA249_14250 IPR036188 FAD/NAD(P)-binding domain superfamily VA249_14250 IPR012727 Glycine oxidase ThiO VA249_14260 IPR008794 Proline racemase family VA249_14270 IPR015590 Aldehyde dehydrogenase domain VA249_14270 IPR016161 Aldehyde/histidinol dehydrogenase VA249_14270 IPR016163 Aldehyde dehydrogenase, C-terminal VA249_14270 IPR016162 Aldehyde dehydrogenase, N-terminal VA249_14280 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_14280 IPR000524 Transcription regulator HTH, GntR VA249_14280 IPR036390 Winged helix DNA-binding domain superfamily VA249_14280 IPR008920 Transcription regulator FadR/GntR, C-terminal VA249_14300 IPR000160 GGDEF domain VA249_14300 IPR011006 CheY-like superfamily VA249_14300 IPR001789 Signal transduction response regulator, receiver domain VA249_14300 IPR029787 Nucleotide cyclase VA249_14330 IPR019017 Signal transduction histidine kinase RcsC, alpha-beta loop, C-terminal VA249_14330 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VA249_14330 IPR038388 RcsC, C-terminal domain superfamily VA249_14330 IPR030856 Sensor histidine kinase RcsC VA249_14330 IPR001789 Signal transduction response regulator, receiver domain VA249_14330 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain VA249_14330 IPR005467 Histidine kinase domain VA249_14330 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VA249_14330 IPR003594 Histidine kinase/HSP90-like ATPase VA249_14330 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily VA249_14330 IPR011006 CheY-like superfamily VA249_14340 IPR016909 Ribosomal RNA large subunit methyltransferase F VA249_14340 IPR010286 METTL16/RlmF family VA249_14340 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VA249_14350 IPR002725 Protein of unknown function DUF45 VA249_14370 IPR000847 Transcription regulator HTH, LysR VA249_14370 IPR036390 Winged helix DNA-binding domain superfamily VA249_14370 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_14370 IPR005119 LysR, substrate-binding VA249_14380 IPR011701 Major facilitator superfamily VA249_14380 IPR036259 MFS transporter superfamily VA249_14380 IPR020846 Major facilitator superfamily domain VA249_14440 IPR001463 Sodium:alanine symporter VA249_14450 IPR001123 Amino acid exporter protein, LeuE-type VA249_14460 IPR001333 Peptidase M32, carboxypeptidase Taq VA249_14470 IPR004960 Bacterial lipid A biosynthesis acyltransferase VA249_14470 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase VA249_14480 IPR001123 Amino acid exporter protein, LeuE-type VA249_14480 IPR004778 Homoserine/Threonine efflux protein VA249_14490 IPR002293 Amino acid/polyamine transporter I VA249_14500 IPR000390 Small multidrug resistance protein family VA249_14520 IPR005697 Homoserine O-succinyltransferase MetA VA249_14520 IPR029062 Class I glutamine amidotransferase-like VA249_14520 IPR033752 MetA family VA249_14530 IPR011990 Tetratricopeptide-like helical domain superfamily VA249_14530 IPR013360 Pilus biogenesis/stability type IV, PilW VA249_14530 IPR019734 Tetratricopeptide repeat VA249_14530 IPR013026 Tetratricopeptide repeat-containing domain VA249_14540 IPR003593 AAA+ ATPase domain VA249_14540 IPR003439 ABC transporter-like VA249_14540 IPR023693 ABC transporter, vitamin B12, BtuD VA249_14540 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_14550 IPR023691 ABC transporter, vitamin B12 import, permease protein BtuC VA249_14550 IPR000522 ABC transporter, permease protein, BtuC-like VA249_14550 IPR037294 ABC transporter, BtuC-like VA249_14560 IPR016681 Succinylglutamate desuccinylase VA249_14560 IPR007036 Succinylglutamate desuccinylase/aspartoacylase VA249_14590 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase VA249_14590 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_14600 IPR003805 Adenosylcobinamide-GDP ribazoletransferase VA249_14610 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like VA249_14610 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal VA249_14610 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic VA249_14610 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily VA249_14620 IPR036291 NAD(P)-binding domain superfamily VA249_14620 IPR016040 NAD(P)-binding domain VA249_14620 IPR000534 Semialdehyde dehydrogenase, NAD-binding VA249_14640 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain VA249_14640 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily VA249_14640 IPR015387 LuxQ, periplasmic VA249_14640 IPR035965 PAS domain superfamily VA249_14640 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VA249_14640 IPR001789 Signal transduction response regulator, receiver domain VA249_14640 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VA249_14640 IPR003594 Histidine kinase/HSP90-like ATPase VA249_14640 IPR011006 CheY-like superfamily VA249_14640 IPR029151 Periplasmic sensor-like domain superfamily VA249_14640 IPR005467 Histidine kinase domain VA249_14680 IPR025668 Transposase DDE domain VA249_14760 IPR001789 Signal transduction response regulator, receiver domain VA249_14760 IPR038388 RcsC, C-terminal domain superfamily VA249_14760 IPR019017 Signal transduction histidine kinase RcsC, alpha-beta loop, C-terminal VA249_14760 IPR011006 CheY-like superfamily VA249_14760 IPR003594 Histidine kinase/HSP90-like ATPase VA249_14760 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VA249_14760 IPR005467 Histidine kinase domain VA249_14760 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain VA249_14760 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily VA249_14760 IPR030856 Sensor histidine kinase RcsC VA249_14760 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VA249_14770 IPR000160 GGDEF domain VA249_14770 IPR005330 MHYT domain VA249_14770 IPR029787 Nucleotide cyclase VA249_14770 IPR001633 EAL domain VA249_14770 IPR035919 EAL domain superfamily VA249_14780 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain VA249_14780 IPR001789 Signal transduction response regulator, receiver domain VA249_14780 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VA249_14780 IPR029151 Periplasmic sensor-like domain superfamily VA249_14780 IPR011006 CheY-like superfamily VA249_14780 IPR035965 PAS domain superfamily VA249_14780 IPR015387 LuxQ, periplasmic VA249_14780 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily VA249_14780 IPR003594 Histidine kinase/HSP90-like ATPase VA249_14780 IPR005467 Histidine kinase domain VA249_14780 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VA249_14800 IPR036390 Winged helix DNA-binding domain superfamily VA249_14800 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_14800 IPR011663 UbiC transcription regulator-associated VA249_14800 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily VA249_14800 IPR000524 Transcription regulator HTH, GntR VA249_14810 IPR002178 PTS EIIA type-2 domain VA249_14810 IPR016152 Phosphotransferase/anion transporter VA249_14810 IPR003501 Phosphotransferase system, EIIB component, type 2/3 VA249_14810 IPR003352 Phosphotransferase system, EIIC VA249_14810 IPR013014 Phosphotransferase system, EIIC component, type 2 VA249_14810 IPR003353 Phosphotransferase system, fructose-specific IIB subunit VA249_14810 IPR036095 PTS system IIB component-like superfamily VA249_14810 IPR006327 Phosphotransferase system, fructose IIC component VA249_14810 IPR004715 Phosphotransferase system, IIA component fructose subfamily VA249_14810 IPR013011 Phosphotransferase system, EIIB component, type 2 VA249_14820 IPR011682 Glycosyl hydrolase family 38, C-terminal VA249_14820 IPR015341 Glycoside hydrolase family 38, central domain VA249_14820 IPR037094 Glycoside hydrolase family 38, central domain superfamily VA249_14820 IPR000602 Glycoside hydrolase family 38, N-terminal domain VA249_14820 IPR027291 Glycoside hydrolase 38, N-terminal domain superfamily VA249_14820 IPR028995 Glycoside hydrolase families 57/38, central domain superfamily VA249_14820 IPR011013 Galactose mutarotase-like domain superfamily VA249_14820 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel VA249_14830 IPR011051 RmlC-like cupin domain superfamily VA249_14830 IPR014710 RmlC-like jelly roll fold VA249_14830 IPR018050 Phosphomannose isomerase, type I, conserved site VA249_14830 IPR016305 Mannose-6-phosphate isomerase VA249_14830 IPR001250 Mannose-6-phosphate isomerase, type I VA249_14840 IPR029787 Nucleotide cyclase VA249_14840 IPR005330 MHYT domain VA249_14840 IPR001633 EAL domain VA249_14840 IPR035919 EAL domain superfamily VA249_14840 IPR000160 GGDEF domain VA249_14860 IPR038649 Exonuclease I, SH3-like domain superfamily VA249_14860 IPR034747 Exonuclease I, SH3-like domain VA249_14860 IPR013520 Exonuclease, RNase T/DNA polymerase III VA249_14860 IPR012337 Ribonuclease H-like superfamily VA249_14860 IPR036397 Ribonuclease H superfamily VA249_14860 IPR023607 Exodeoxyribonuclease I VA249_14860 IPR034748 Exonuclease I, C-terminal alpha-helical domain VA249_14860 IPR013620 Exodeoxyribonuclease I, C-terminal VA249_14870 IPR022957 Uncharacterised protein family UPF0299 VA249_14870 IPR005538 LrgA/CidA family VA249_14880 IPR005261 Conserved hypothetical protein CHP00659 VA249_14880 IPR007300 CidB/LrgB family VA249_14890 IPR007300 CidB/LrgB family VA249_14890 IPR005261 Conserved hypothetical protein CHP00659 VA249_14900 IPR002125 Cytidine and deoxycytidylate deaminase domain VA249_14900 IPR013171 Cytidine/deoxycytidylate deaminase, zinc-binding domain VA249_14900 IPR006263 Cytidine deaminase, homodimeric VA249_14900 IPR016193 Cytidine deaminase-like VA249_14900 IPR020797 Cytidine deaminase, bacteria VA249_14900 IPR016192 APOBEC/CMP deaminase, zinc-binding VA249_14910 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase VA249_14910 IPR011761 ATP-grasp fold VA249_14910 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type VA249_14910 IPR011054 Rudiment single hybrid motif VA249_14910 IPR013815 ATP-grasp fold, subdomain 1 VA249_14910 IPR016185 Pre-ATP-grasp domain superfamily VA249_14920 IPR008854 TPMT family VA249_14920 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VA249_14920 IPR022474 Thiopurine S-methyltransferase, Se/Te detoxification VA249_14920 IPR025835 Thiopurine S-methyltransferase VA249_14940 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily VA249_14940 IPR005684 Integration host factor, alpha subunit VA249_14940 IPR020816 Histone-like DNA-binding protein, conserved site VA249_14940 IPR000119 Histone-like DNA-binding protein VA249_14960 IPR029787 Nucleotide cyclase VA249_14960 IPR039435 Diguanylate cyclase DosC, globin sensor domain VA249_14960 IPR012292 Globin/Protoglobin VA249_14960 IPR009050 Globin-like superfamily VA249_14960 IPR000160 GGDEF domain VA249_14980 IPR012725 Chaperone DnaK VA249_14980 IPR018181 Heat shock protein 70, conserved site VA249_14980 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily VA249_14980 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily VA249_14980 IPR013126 Heat shock protein 70 family VA249_14990 IPR013126 Heat shock protein 70 family VA249_14990 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily VA249_14990 IPR012725 Chaperone DnaK VA249_14990 IPR018181 Heat shock protein 70, conserved site VA249_14990 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily VA249_15020 IPR039421 Type I protein exporter VA249_15020 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_15020 IPR017871 ABC transporter, conserved site VA249_15020 IPR036640 ABC transporter type 1, transmembrane domain superfamily VA249_15020 IPR011527 ABC transporter type 1, transmembrane domain VA249_15020 IPR003593 AAA+ ATPase domain VA249_15020 IPR003439 ABC transporter-like VA249_15030 IPR039421 Type I protein exporter VA249_15030 IPR003593 AAA+ ATPase domain VA249_15030 IPR011527 ABC transporter type 1, transmembrane domain VA249_15030 IPR036640 ABC transporter type 1, transmembrane domain superfamily VA249_15030 IPR003439 ABC transporter-like VA249_15030 IPR017871 ABC transporter, conserved site VA249_15030 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_15060 IPR001789 Signal transduction response regulator, receiver domain VA249_15060 IPR037522 HD-GYP domain VA249_15060 IPR011006 CheY-like superfamily VA249_15060 IPR003607 HD/PDEase domain VA249_15070 IPR018227 Amino acid/polyamine transporter 2 VA249_15070 IPR013061 Tryptophan/tryrosine permease, conserved site VA249_15070 IPR013059 Tryptophan/tyrosine transporter VA249_15080 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA VA249_15080 IPR018211 Alcohol dehydrogenase, iron-type, conserved site VA249_15080 IPR039697 Iron-type alcohol dehydrogenase-like VA249_15100 IPR005496 Integral membrane protein TerC VA249_15110 IPR005119 LysR, substrate-binding VA249_15110 IPR037417 HTH-type transcriptional regulator SyrM, PBP2 domain VA249_15110 IPR036390 Winged helix DNA-binding domain superfamily VA249_15110 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_15110 IPR000847 Transcription regulator HTH, LysR VA249_15120 IPR023912 Putative glycyl-radical enzyme activating enzyme YjjW VA249_15120 IPR007197 Radical SAM VA249_15120 IPR001989 Radical-activating enzyme, conserved site VA249_15120 IPR012839 Organic radical enzyme activase VA249_15120 IPR034457 Organic radical-activating enzymes VA249_15120 IPR013785 Aldolase-type TIM barrel VA249_15120 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VA249_15120 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VA249_15130 IPR016905 Glycyl radical enzyme, HI0521, predicted VA249_15140 IPR001123 Amino acid exporter protein, LeuE-type VA249_15140 IPR004778 Homoserine/Threonine efflux protein VA249_15150 IPR006675 HDIG domain VA249_15150 IPR037522 HD-GYP domain VA249_15150 IPR006674 HD domain VA249_15150 IPR021812 Protein of unknown function DUF3391 VA249_15150 IPR003607 HD/PDEase domain VA249_15160 IPR029787 Nucleotide cyclase VA249_15160 IPR003660 HAMP domain VA249_15160 IPR000160 GGDEF domain VA249_15160 IPR035919 EAL domain superfamily VA249_15160 IPR001633 EAL domain VA249_15170 IPR001789 Signal transduction response regulator, receiver domain VA249_15170 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_15170 IPR002197 DNA binding HTH domain, Fis-type VA249_15170 IPR009057 Homeobox-like domain superfamily VA249_15170 IPR011006 CheY-like superfamily VA249_15170 IPR002078 RNA polymerase sigma factor 54 interaction domain VA249_15170 IPR025944 Sigma-54 interaction domain, conserved site VA249_15180 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VA249_15180 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VA249_15180 IPR003594 Histidine kinase/HSP90-like ATPase VA249_15180 IPR005467 Histidine kinase domain VA249_15180 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain VA249_15180 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily VA249_15180 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VA249_15190 IPR001898 Solute carrier family 13 VA249_15190 IPR031312 Sodium/sulphate symporter, conserved site VA249_15210 IPR016181 Acyl-CoA N-acyltransferase VA249_15210 IPR000182 GNAT domain VA249_15290 IPR002347 Short-chain dehydrogenase/reductase SDR VA249_15290 IPR036291 NAD(P)-binding domain superfamily VA249_15290 IPR020904 Short-chain dehydrogenase/reductase, conserved site VA249_15310 IPR025161 Putative transposase IS4/IS5 family VA249_15320 IPR025161 Putative transposase IS4/IS5 family VA249_15430 IPR025161 Putative transposase IS4/IS5 family VA249_15450 IPR032758 Antitoxin MqsA/HigA-2 VA249_15450 IPR010982 Lambda repressor-like, DNA-binding domain superfamily VA249_15450 IPR001387 Cro/C1-type helix-turn-helix domain VA249_15460 IPR009387 Toxin HigB-2 VA249_15550 IPR025161 Putative transposase IS4/IS5 family VA249_15590 IPR020476 NUDIX hydrolase VA249_15590 IPR015797 NUDIX hydrolase-like domain superfamily VA249_15590 IPR020084 NUDIX hydrolase, conserved site VA249_15590 IPR000086 NUDIX hydrolase domain VA249_15720 IPR000182 GNAT domain VA249_15720 IPR016181 Acyl-CoA N-acyltransferase VA249_15760 IPR007344 GrpB/Dephospho-CoA kinase VA249_15850 IPR013762 Integrase-like, catalytic domain superfamily VA249_15850 IPR002104 Integrase, catalytic domain VA249_15850 IPR010998 Integrase/recombinase, N-terminal VA249_15850 IPR011010 DNA breaking-rejoining enzyme, catalytic core VA249_15850 IPR011946 Integrase, integron-type VA249_15850 IPR004107 Integrase, SAM-like, N-terminal VA249_15880 IPR016181 Acyl-CoA N-acyltransferase VA249_15880 IPR000182 GNAT domain VA249_15890 IPR035965 PAS domain superfamily VA249_15890 IPR003593 AAA+ ATPase domain VA249_15890 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VA249_15890 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VA249_15890 IPR025944 Sigma-54 interaction domain, conserved site VA249_15890 IPR002078 RNA polymerase sigma factor 54 interaction domain VA249_15890 IPR009057 Homeobox-like domain superfamily VA249_15890 IPR030828 TyrR family, helix-turn-helix domain VA249_15890 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_15890 IPR000014 PAS domain VA249_15890 IPR002912 ACT domain VA249_15900 IPR021147 Protein of unknown function DUF697 VA249_15900 IPR006507 Uncharacterised protein family UPF0283 VA249_15910 IPR007413 Protein of unknown function DUF463, YcjX-like protein VA249_15940 IPR006805 Anthranilate synthase component I, N-terminal VA249_15940 IPR019999 Anthranilate synthase component I-like VA249_15940 IPR005801 ADC synthase VA249_15940 IPR005802 Aminodeoxychorismate synthase, component I VA249_15940 IPR015890 Chorismate-utilising enzyme, C-terminal VA249_15950 IPR000059 NUDIX hydrolase, NudL, conserved site VA249_15950 IPR000086 NUDIX hydrolase domain VA249_15950 IPR015797 NUDIX hydrolase-like domain superfamily VA249_15950 IPR023735 Uncharacterised nudix hydrolase NudL VA249_15960 IPR018227 Amino acid/polyamine transporter 2 VA249_15960 IPR004694 Hydroxy amino acid transporter VA249_15970 IPR005130 Serine dehydratase-like, alpha subunit VA249_15970 IPR029009 Allosteric substrate binding domain superfamily VA249_15970 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form VA249_15970 IPR005131 Serine dehydratase beta chain VA249_15990 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family VA249_15990 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily VA249_16000 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) VA249_16000 IPR006195 Aminoacyl-tRNA synthetase, class II VA249_16000 IPR004522 Asparagine-tRNA ligase VA249_16000 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type VA249_16000 IPR012340 Nucleic acid-binding, OB-fold VA249_16000 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb VA249_16030 IPR015421 Pyridoxal phosphate-dependent transferase, major domain VA249_16030 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 VA249_16030 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site VA249_16030 IPR000796 Aspartate/other aminotransferase VA249_16030 IPR004839 Aminotransferase, class I/classII VA249_16030 IPR015424 Pyridoxal phosphate-dependent transferase VA249_16060 IPR004013 PHP domain VA249_16060 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain VA249_16060 IPR028112 DNA polymerase III polC-type, N-terminal domain I VA249_16060 IPR003141 Polymerase/histidinol phosphatase, N-terminal VA249_16060 IPR036397 Ribonuclease H superfamily VA249_16060 IPR012337 Ribonuclease H-like superfamily VA249_16060 IPR024754 DNA polymerase III polC-like, N-terminal domain II VA249_16060 IPR029460 DNA polymerase, helix-hairpin-helix motif VA249_16060 IPR040982 DNA polymerase III alpha subunit finger domain VA249_16060 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain VA249_16060 IPR013520 Exonuclease, RNase T/DNA polymerase III VA249_16060 IPR006308 DNA polymerase III, alpha subunit, Gram-positive type VA249_16070 IPR033479 Double Cache domain 1 VA249_16070 IPR003660 HAMP domain VA249_16070 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VA249_16070 IPR029151 Periplasmic sensor-like domain superfamily VA249_16070 IPR004090 Chemotaxis methyl-accepting receptor VA249_16070 IPR000727 Target SNARE coiled-coil homology domain VA249_16220 IPR036420 BRCT domain superfamily VA249_16220 IPR041663 DisA/LigA, helix-hairpin-helix motif VA249_16220 IPR018239 NAD-dependent DNA ligase, active site VA249_16220 IPR001679 NAD-dependent DNA ligase VA249_16220 IPR013839 NAD-dependent DNA ligase, adenylation VA249_16220 IPR013840 NAD-dependent DNA ligase, N-terminal VA249_16220 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type VA249_16220 IPR010994 RuvA domain 2-like VA249_16220 IPR004150 NAD-dependent DNA ligase, OB-fold VA249_16220 IPR001357 BRCT domain VA249_16220 IPR012340 Nucleic acid-binding, OB-fold VA249_16260 IPR025827 Recombinase zinc beta ribbon domain VA249_16260 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily VA249_16260 IPR006119 Resolvase, N-terminal catalytic domain VA249_16260 IPR011109 DNA-binding recombinase domain VA249_16260 IPR038109 DNA-binding recombinase domain superfamily VA249_16280 IPR000060 BCCT transporter family VA249_16280 IPR018093 BCCT transporter, conserved site VA249_16300 IPR011006 CheY-like superfamily VA249_16300 IPR016032 Signal transduction response regulator, C-terminal effector VA249_16300 IPR001789 Signal transduction response regulator, receiver domain VA249_16300 IPR000792 Transcription regulator LuxR, C-terminal VA249_16320 IPR003594 Histidine kinase/HSP90-like ATPase VA249_16320 IPR033480 Single Cache domain 2 VA249_16320 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain VA249_16320 IPR017171 Signal transduction histidine kinase, MctS VA249_16320 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VA249_16330 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VA249_16330 IPR004681 TRAP transporter large membrane protein DctM VA249_16350 IPR026289 Solute binding protein, TakP-like VA249_16350 IPR018389 TRAP transporter solute receptor DctP/TeaA VA249_16350 IPR041722 Alpha-keto acid binding periplasmic protein VA249_16350 IPR038404 TRAP transporter solute receptor DctP superfamily VA249_16380 IPR001279 Metallo-beta-lactamase VA249_16380 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VA249_16390 IPR010275 Protein of unknown function DUF882 VA249_16390 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily VA249_16390 IPR006311 Twin-arginine translocation pathway, signal sequence VA249_16400 IPR002477 Peptidoglycan binding-like VA249_16400 IPR005490 L,D-transpeptidase catalytic domain VA249_16400 IPR036365 PGBD-like superfamily VA249_16400 IPR038063 L,D-transpeptidase catalytic domain-like VA249_16410 IPR032677 GTP cyclohydrolase II VA249_16410 IPR036144 RibA-like superfamily VA249_16410 IPR000926 GTP cyclohydrolase II, RibA VA249_16450 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal VA249_16450 IPR005743 DNA gyrase, subunit A VA249_16450 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat VA249_16450 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal VA249_16450 IPR013760 DNA topoisomerase, type IIA-like domain superfamily VA249_16450 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta VA249_16450 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily VA249_16460 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VA249_16460 IPR010233 Ubiquinone biosynthesis O-methyltransferase VA249_16470 IPR000788 Ribonucleotide reductase large subunit, C-terminal VA249_16470 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal VA249_16470 IPR013509 Ribonucleotide reductase large subunit, N-terminal VA249_16470 IPR005144 ATP-cone domain VA249_16470 IPR013346 Ribonucleotide reductase, class I , alpha subunit VA249_16470 IPR039718 Ribonucleoside-diphosphate reductase large subunit VA249_16480 IPR009078 Ferritin-like superfamily VA249_16480 IPR000358 Ribonucleotide reductase small subunit family VA249_16480 IPR030475 Ribonucleotide reductase small subunit, acitve site VA249_16480 IPR033909 Ribonucleotide reductase small subunit VA249_16480 IPR012348 Ribonucleotide reductase-like VA249_16500 IPR001453 MoaB/Mog domain VA249_16500 IPR036425 MoaB/Mog-like domain superfamily VA249_16500 IPR008135 Competence-induced protein CinA VA249_16500 IPR036653 CinA-like, C-terminal VA249_16520 IPR036291 NAD(P)-binding domain superfamily VA249_16520 IPR003099 Prephenate dehydrogenase VA249_16520 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily VA249_16520 IPR002912 ACT domain VA249_16530 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal VA249_16530 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal VA249_16530 IPR029066 PLP-binding barrel VA249_16530 IPR005730 Carboxynorspermidine decarboxylase VA249_16540 IPR005097 Saccharopine dehydrogenase, NADP binding domain VA249_16540 IPR032095 Saccharopine dehydrogenase, C-terminal VA249_16540 IPR036291 NAD(P)-binding domain superfamily VA249_16550 IPR004637 2,4-diaminobutyrate 4-transaminase VA249_16550 IPR015421 Pyridoxal phosphate-dependent transferase, major domain VA249_16550 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 VA249_16550 IPR015424 Pyridoxal phosphate-dependent transferase VA249_16550 IPR005814 Aminotransferase class-III VA249_16560 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase VA249_16560 IPR023762 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, bacterial VA249_16560 IPR000462 CDP-alcohol phosphatidyltransferase VA249_16570 IPR036876 UVR domain superfamily VA249_16570 IPR038476 UvrC homology region 2 superfamily VA249_16570 IPR001943 UVR domain VA249_16570 IPR010994 RuvA domain 2-like VA249_16570 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 VA249_16570 IPR035901 GIY-YIG endonuclease superfamily VA249_16570 IPR000305 GIY-YIG endonuclease VA249_16570 IPR001162 UvrC family homology region VA249_16570 IPR004791 UvrABC system, subunit C VA249_16580 IPR001789 Signal transduction response regulator, receiver domain VA249_16580 IPR000792 Transcription regulator LuxR, C-terminal VA249_16580 IPR016032 Signal transduction response regulator, C-terminal effector VA249_16580 IPR011006 CheY-like superfamily VA249_16590 IPR042087 DNA polymerase family B, C-terminal domain VA249_16590 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain VA249_16590 IPR017964 DNA-directed DNA polymerase, family B, conserved site VA249_16590 IPR012337 Ribonuclease H-like superfamily VA249_16590 IPR006172 DNA-directed DNA polymerase, family B VA249_16590 IPR023211 DNA polymerase, palm domain superfamily VA249_16590 IPR036397 Ribonuclease H superfamily VA249_16590 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain VA249_16610 IPR015365 Elongation factor P, C-terminal VA249_16610 IPR014722 Ribosomal protein L2, domain 2 VA249_16610 IPR020599 Translation elongation factor P/YeiP VA249_16610 IPR013185 Translation elongation factor, KOW-like VA249_16610 IPR011897 Translation elongation factor P-like, YeiP VA249_16610 IPR001059 Translation elongation factor P/YeiP, central VA249_16610 IPR012340 Nucleic acid-binding, OB-fold VA249_16610 IPR013852 Translation elongation factor P/YeiP, conserved site VA249_16610 IPR008991 Translation protein SH3-like domain superfamily VA249_16620 IPR036763 Putative dsDNA mimic superfamily VA249_16620 IPR007376 dsDNA mimic, putative VA249_16630 IPR002942 RNA-binding S4 domain VA249_16630 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain VA249_16630 IPR020103 Pseudouridine synthase, catalytic domain superfamily VA249_16630 IPR006145 Pseudouridine synthase, RsuA/RluA VA249_16630 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F VA249_16630 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site VA249_16630 IPR036986 RNA-binding S4 domain superfamily VA249_16640 IPR006070 YrdC-like domain VA249_16640 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily VA249_16650 IPR003141 Polymerase/histidinol phosphatase, N-terminal VA249_16650 IPR004013 PHP domain VA249_16650 IPR016195 Polymerase/histidinol phosphatase-like VA249_16660 IPR005801 ADC synthase VA249_16660 IPR019999 Anthranilate synthase component I-like VA249_16660 IPR006805 Anthranilate synthase component I, N-terminal VA249_16660 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial VA249_16660 IPR015890 Chorismate-utilising enzyme, C-terminal VA249_16670 IPR029062 Class I glutamine amidotransferase-like VA249_16670 IPR017926 Glutamine amidotransferase VA249_16670 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain VA249_16680 IPR017459 Glycosyl transferase family 3, N-terminal domain VA249_16680 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily VA249_16680 IPR005940 Anthranilate phosphoribosyl transferase VA249_16680 IPR000312 Glycosyl transferase, family 3 VA249_16680 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily VA249_16690 IPR001468 Indole-3-glycerol phosphate synthase, conserved site VA249_16690 IPR013798 Indole-3-glycerol phosphate synthase VA249_16690 IPR013785 Aldolase-type TIM barrel VA249_16690 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) VA249_16690 IPR011060 Ribulose-phosphate binding barrel VA249_16700 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme VA249_16700 IPR023026 Tryptophan synthase beta chain/beta chain-like VA249_16700 IPR006654 Tryptophan synthase, beta chain VA249_16700 IPR006653 Tryptophan synthase, beta chain, conserved site VA249_16700 IPR001926 Pyridoxal-phosphate dependent enzyme VA249_16710 IPR011060 Ribulose-phosphate binding barrel VA249_16710 IPR013785 Aldolase-type TIM barrel VA249_16710 IPR002028 Tryptophan synthase, alpha chain VA249_16710 IPR018204 Tryptophan synthase, alpha chain, active site VA249_16720 IPR023954 C4-dicarboxylate transport protein VA249_16720 IPR036458 Sodium:dicarboxylate symporter superfamily VA249_16720 IPR018107 Sodium:dicarboxylate symporter, conserved site VA249_16720 IPR001991 Sodium:dicarboxylate symporter VA249_16730 IPR006008 Intracellular septation protein A VA249_16740 IPR040170 Cytosolic acyl coenzyme A thioester hydrolase VA249_16740 IPR029069 HotDog domain superfamily VA249_16740 IPR006683 Thioesterase domain VA249_16740 IPR033120 Hotdog acyl-CoA thioesterase (ACOT)-type domain VA249_16750 IPR011008 Dimeric alpha-beta barrel VA249_16750 IPR005545 YCII-related VA249_16770 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal VA249_16770 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal VA249_16770 IPR038071 UROD/MetE-like superfamily VA249_16770 IPR006276 Cobalamin-independent methionine synthase VA249_16780 IPR000847 Transcription regulator HTH, LysR VA249_16780 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_16780 IPR036390 Winged helix DNA-binding domain superfamily VA249_16780 IPR037406 HTH-type transcriptional regulator MetR, PBP2 domain VA249_16780 IPR005119 LysR, substrate-binding VA249_16810 IPR001633 EAL domain VA249_16810 IPR000160 GGDEF domain VA249_16810 IPR005330 MHYT domain VA249_16810 IPR029787 Nucleotide cyclase VA249_16810 IPR035919 EAL domain superfamily VA249_16820 IPR007197 Radical SAM VA249_16820 IPR022946 Uncharacterised protein family UPF0313 VA249_16820 IPR024560 Uncharacterised protein family UPF0313, C-terminal VA249_16820 IPR013704 Uncharacterised protein family UPF0313, N-terminal VA249_16820 IPR020612 Methylthiotransferase, conserved site VA249_16820 IPR006638 Elp3/MiaB/NifB VA249_16820 IPR023404 Radical SAM, alpha/beta horseshoe VA249_16830 IPR036188 FAD/NAD(P)-binding domain superfamily VA249_16830 IPR023753 FAD/NAD(P)-binding domain VA249_16830 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily VA249_16830 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VA249_16840 IPR001991 Sodium:dicarboxylate symporter VA249_16840 IPR036458 Sodium:dicarboxylate symporter superfamily VA249_16850 IPR006056 RidA family VA249_16850 IPR019897 RidA, conserved site VA249_16850 IPR006175 YjgF/YER057c/UK114 family VA249_16850 IPR035959 RutC-like superfamily VA249_16860 IPR039445 Transcriptional regulator DauR-like, HTH domain VA249_16860 IPR013559 YheO-like VA249_16860 IPR039446 Transcriptional regulator DauR-like VA249_16870 IPR003660 HAMP domain VA249_16870 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VA249_16890 IPR022839 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase VA249_16890 IPR003342 Glycosyl transferase family 39/83 VA249_16900 IPR001173 Glycosyltransferase 2-like VA249_16900 IPR029044 Nucleotide-diphospho-sugar transferases VA249_16910 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_16910 IPR039420 Transcriptional regulatory protein WalR-like VA249_16910 IPR001789 Signal transduction response regulator, receiver domain VA249_16910 IPR011006 CheY-like superfamily VA249_16910 IPR001867 OmpR/PhoB-type DNA-binding domain VA249_16920 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain VA249_16920 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VA249_16920 IPR003594 Histidine kinase/HSP90-like ATPase VA249_16920 IPR005467 Histidine kinase domain VA249_16920 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VA249_16920 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily VA249_16920 IPR003660 HAMP domain VA249_16960 IPR005119 LysR, substrate-binding VA249_16960 IPR036390 Winged helix DNA-binding domain superfamily VA249_16960 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_16960 IPR000847 Transcription regulator HTH, LysR VA249_16970 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VA249_16970 IPR030196 Multidrug resistance protein MdtN VA249_16970 IPR005694 Efflux pump membrane protein VA249_17020 IPR005746 Thioredoxin VA249_17020 IPR036249 Thioredoxin-like superfamily VA249_17020 IPR013766 Thioredoxin domain VA249_17020 IPR017937 Thioredoxin, conserved site VA249_17030 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily VA249_17030 IPR022910 Thiol:disulphide interchange protein DsbD VA249_17030 IPR036249 Thioredoxin-like superfamily VA249_17030 IPR035671 DsbD gamma VA249_17030 IPR013766 Thioredoxin domain VA249_17030 IPR003834 Cytochrome C biogenesis protein, transmembrane domain VA249_17030 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain VA249_17030 IPR017937 Thioredoxin, conserved site VA249_17050 IPR005119 LysR, substrate-binding VA249_17050 IPR000847 Transcription regulator HTH, LysR VA249_17050 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_17050 IPR036390 Winged helix DNA-binding domain superfamily VA249_17060 IPR037522 HD-GYP domain VA249_17060 IPR003607 HD/PDEase domain VA249_17060 IPR006674 HD domain VA249_17060 IPR006675 HDIG domain VA249_17070 IPR018043 Sodium:galactoside symporter, conserved site VA249_17070 IPR001927 Sodium:galactoside symporter VA249_17070 IPR036259 MFS transporter superfamily VA249_17070 IPR039672 Lactose permease-like VA249_17080 IPR013785 Aldolase-type TIM barrel VA249_17080 IPR038417 Alpha-galactosidase, N-terminal domain superfamily VA249_17080 IPR000111 Glycoside hydrolase family 27/36, conserved site VA249_17080 IPR002252 Glycoside hydrolase family 36 VA249_17080 IPR031705 Glycosyl hydrolase family 36, C-terminal VA249_17080 IPR031704 Glycosyl hydrolase family 36, N-terminal VA249_17080 IPR017853 Glycoside hydrolase superfamily VA249_17090 IPR003192 Porin, LamB-type VA249_17090 IPR036998 Porin, LamB-type superfamily VA249_17090 IPR023738 Maltoporin VA249_17110 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich VA249_17110 IPR004199 Beta galactosidase small chain/ domain 5 VA249_17110 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily VA249_17110 IPR011013 Galactose mutarotase-like domain superfamily VA249_17110 IPR032312 Beta-galactosidase, domain 4 VA249_17110 IPR013783 Immunoglobulin-like fold VA249_17110 IPR017853 Glycoside hydrolase superfamily VA249_17110 IPR008979 Galactose-binding-like domain superfamily VA249_17110 IPR014718 Glycoside hydrolase-type carbohydrate-binding VA249_17110 IPR006101 Glycoside hydrolase, family 2 VA249_17110 IPR023232 Glycoside hydrolase, family 2, active site VA249_17110 IPR023933 Glycoside hydrolase, family 2, beta-galactosidase VA249_17110 IPR006103 Glycoside hydrolase family 2, catalytic domain VA249_17110 IPR006104 Glycosyl hydrolases family 2, sugar binding domain VA249_17120 IPR028082 Periplasmic binding protein-like I VA249_17120 IPR010982 Lambda repressor-like, DNA-binding domain superfamily VA249_17120 IPR000843 LacI-type HTH domain VA249_17130 IPR007498 Intermembrane transport protein PqiA-like VA249_17130 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type VA249_17140 IPR003399 Mce/MlaD VA249_17150 IPR005586 ABC-type transport auxiliary lipoprotein component VA249_17190 IPR039424 Solute-binding protein family 5 VA249_17190 IPR000914 Solute-binding protein family 5 domain VA249_17190 IPR023765 Solute-binding protein family 5, conserved site VA249_17190 IPR030678 Peptide/nickel binding protein, MppA-type VA249_17200 IPR018089 Orotidine 5'-phosphate decarboxylase, active site VA249_17200 IPR001754 Orotidine 5'-phosphate decarboxylase domain VA249_17200 IPR014732 Orotidine 5'-phosphate decarboxylase VA249_17200 IPR013785 Aldolase-type TIM barrel VA249_17200 IPR011060 Ribulose-phosphate binding barrel VA249_17210 IPR030865 Lipopolysaccharide assembly protein B VA249_17210 IPR011990 Tetratricopeptide-like helical domain superfamily VA249_17210 IPR013026 Tetratricopeptide repeat-containing domain VA249_17210 IPR041166 LapB, rubredoxin metal binding domain VA249_17210 IPR019734 Tetratricopeptide repeat VA249_17220 IPR010445 Lipopolysaccharide assembly protein A domain VA249_17220 IPR032906 Lipopolysaccharide assembly protein A VA249_17230 IPR020816 Histone-like DNA-binding protein, conserved site VA249_17230 IPR000119 Histone-like DNA-binding protein VA249_17230 IPR005685 Integration host factor, beta subunit VA249_17230 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily VA249_17240 IPR012340 Nucleic acid-binding, OB-fold VA249_17240 IPR022967 RNA-binding domain, S1 VA249_17240 IPR003029 S1 domain VA249_17240 IPR000110 Ribosomal protein S1 VA249_17250 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_17250 IPR011994 Cytidylate kinase domain VA249_17250 IPR003136 Cytidylate kinase VA249_17260 IPR013703 Peptidase S49, N-terminal proteobacteria VA249_17260 IPR002142 Peptidase S49 VA249_17260 IPR029045 ClpP/crotonase-like domain superfamily VA249_17270 IPR020904 Short-chain dehydrogenase/reductase, conserved site VA249_17270 IPR002347 Short-chain dehydrogenase/reductase SDR VA249_17270 IPR036291 NAD(P)-binding domain superfamily VA249_17300 IPR040982 DNA polymerase III alpha subunit finger domain VA249_17300 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain VA249_17300 IPR004805 DNA polymerase III, alpha subunit VA249_17300 IPR003141 Polymerase/histidinol phosphatase, N-terminal VA249_17300 IPR004013 PHP domain VA249_17300 IPR023073 DNA polymerase, error-prone VA249_17300 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type VA249_17300 IPR029460 DNA polymerase, helix-hairpin-helix motif VA249_17310 IPR001789 Signal transduction response regulator, receiver domain VA249_17310 IPR002545 CheW-like domain VA249_17310 IPR011006 CheY-like superfamily VA249_17310 IPR024181 Chemotaxis response regulator CheV VA249_17310 IPR036061 CheW-like domain superfamily VA249_17320 IPR000600 ROK family VA249_17320 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_17320 IPR036390 Winged helix DNA-binding domain superfamily VA249_17330 IPR040442 Pyruvate kinase-like domain superfamily VA249_17330 IPR011037 Pyruvate kinase-like, insert domain superfamily VA249_17330 IPR015806 Pyruvate kinase, insert domain superfamily VA249_17330 IPR018209 Pyruvate kinase, active site VA249_17330 IPR001697 Pyruvate kinase VA249_17330 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily VA249_17330 IPR015793 Pyruvate kinase, barrel VA249_17330 IPR036918 Pyruvate kinase, C-terminal domain superfamily VA249_17330 IPR015795 Pyruvate kinase, C-terminal VA249_17340 IPR037483 YjjU-like VA249_17340 IPR002641 Patatin-like phospholipase domain VA249_17340 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase VA249_17370 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component VA249_17370 IPR036878 Glucose permease domain IIB VA249_17370 IPR011299 PTS system glucose-specific IIBC component VA249_17370 IPR001996 Phosphotransferase system, IIB component, type 1 VA249_17370 IPR013013 Phosphotransferase system, EIIC component, type 1 VA249_17370 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site VA249_17370 IPR003352 Phosphotransferase system, EIIC VA249_17380 IPR018228 Deoxyribonuclease, TatD-related, conserved site VA249_17380 IPR001130 TatD family VA249_17380 IPR032466 Metal-dependent hydrolase VA249_17380 IPR015991 Uncharacterised hydrolase TatD-type VA249_17390 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_17390 IPR015199 DNA polymerase III, delta subunit, C-terminal VA249_17390 IPR004622 DNA polymerase III, delta prime subunit VA249_17400 IPR018094 Thymidylate kinase VA249_17400 IPR018095 Thymidylate kinase, conserved site VA249_17400 IPR039430 Thymidylate kinase-like domain VA249_17400 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_17410 IPR003770 Endolytic murein transglycosylase VA249_17420 IPR017824 Aminodeoxychorismate lyase, class IV VA249_17420 IPR001544 Aminotransferase class IV VA249_17420 IPR036038 Aminotransferase-like, PLP-dependent enzymes VA249_17420 IPR018300 Aminotransferase, class IV, conserved site VA249_17430 IPR014030 Beta-ketoacyl synthase, N-terminal VA249_17430 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 VA249_17430 IPR000794 Beta-ketoacyl synthase VA249_17430 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain VA249_17430 IPR016039 Thiolase-like VA249_17430 IPR018201 Beta-ketoacyl synthase, active site VA249_17430 IPR014031 Beta-ketoacyl synthase, C-terminal VA249_17440 IPR036736 ACP-like superfamily VA249_17440 IPR003231 Acyl carrier protein (ACP) VA249_17440 IPR009081 Phosphopantetheine binding ACP domain VA249_17440 IPR006162 Phosphopantetheine attachment site VA249_17450 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase VA249_17450 IPR036291 NAD(P)-binding domain superfamily VA249_17450 IPR020904 Short-chain dehydrogenase/reductase, conserved site VA249_17450 IPR002347 Short-chain dehydrogenase/reductase SDR VA249_17460 IPR014043 Acyl transferase VA249_17460 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase VA249_17460 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding VA249_17460 IPR024925 Malonyl CoA-acyl carrier protein transacylase VA249_17460 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type VA249_17460 IPR001227 Acyl transferase domain superfamily VA249_17470 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal VA249_17470 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 VA249_17470 IPR016039 Thiolase-like VA249_17470 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III VA249_17480 IPR012281 Phospholipid biosynthesis protein, PlsX-like VA249_17480 IPR003664 Fatty acid synthesis PlsX protein VA249_17490 IPR011332 Zinc-binding ribosomal protein VA249_17490 IPR002677 Ribosomal protein L32p VA249_17500 IPR003772 Large ribosomal RNA subunit accumulation protein YceD VA249_17500 IPR039255 Large ribosomal RNA subunit accumulation protein YceD, bacteria VA249_17510 IPR029001 Inosine triphosphate pyrophosphatase-like VA249_17510 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein VA249_17520 IPR036986 RNA-binding S4 domain superfamily VA249_17520 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site VA249_17520 IPR020103 Pseudouridine synthase, catalytic domain superfamily VA249_17520 IPR002942 RNA-binding S4 domain VA249_17520 IPR006225 Pseudouridine synthase, RluC/RluD VA249_17520 IPR006145 Pseudouridine synthase, RsuA/RluA VA249_17530 IPR012340 Nucleic acid-binding, OB-fold VA249_17530 IPR021968 Polyribonucleotide phosphorylase C-terminal VA249_17530 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G VA249_17530 IPR028878 Ribonuclease E VA249_17530 IPR004659 Ribonuclease E/G VA249_17530 IPR022967 RNA-binding domain, S1 VA249_17530 IPR003029 S1 domain VA249_17540 IPR018045 Sulphate anion transporter, conserved site VA249_17540 IPR011547 SLC26A/SulP transporter domain VA249_17540 IPR036513 STAS domain superfamily VA249_17540 IPR001902 SLC26A/SulP transporter VA249_17540 IPR002645 STAS domain VA249_17550 IPR023485 Phosphotyrosine protein phosphatase I VA249_17550 IPR036196 Phosphotyrosine protein phosphatase I superfamily VA249_17550 IPR017867 Protein-tyrosine phosphatase, low molecular weight VA249_17560 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR VA249_17560 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain VA249_17560 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_17570 IPR009057 Homeobox-like domain superfamily VA249_17570 IPR038965 Transposase InsF-like VA249_17580 IPR007844 AsmA VA249_17590 IPR026008 Uridine kinase VA249_17590 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_17590 IPR000764 Uridine kinase-like VA249_17590 IPR006083 Phosphoribulokinase/uridine kinase VA249_17600 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 VA249_17600 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_17600 IPR000808 Mrp, conserved site VA249_17600 IPR019591 Mrp/NBP35 ATP-binding protein VA249_17600 IPR034904 Fe-S cluster assembly domain superfamily VA249_17610 IPR014758 Methionyl-tRNA synthetase VA249_17610 IPR041872 Methionyl-tRNA synthetase, anticodon-binding domain VA249_17610 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal VA249_17610 IPR023458 Methionine-tRNA ligase, type 1 VA249_17610 IPR015413 Methionyl/Leucyl tRNA synthetase VA249_17610 IPR033911 Methioninyl-tRNA synthetase core domain VA249_17610 IPR029038 Methionyl-tRNA synthetase, Zn-domain VA249_17610 IPR012340 Nucleic acid-binding, OB-fold VA249_17610 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VA249_17610 IPR002547 tRNA-binding domain VA249_17610 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding VA249_17610 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site VA249_17630 IPR014178 Fatty acid response transcription factor FadR VA249_17630 IPR028374 FadR, C-terminal domain VA249_17630 IPR008920 Transcription regulator FadR/GntR, C-terminal VA249_17630 IPR000524 Transcription regulator HTH, GntR VA249_17630 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_17630 IPR036390 Winged helix DNA-binding domain superfamily VA249_17640 IPR004671 Na+/H+ antiporter NhaB VA249_17650 IPR003752 Disulphide bond formation protein DsbB/BdbC VA249_17650 IPR022920 Disulphide bond formation protein DsbB VA249_17650 IPR023380 DsbB-like superfamily VA249_17660 IPR004027 SEC-C motif VA249_17660 IPR036255 YgfB-like superfamily VA249_17660 IPR011978 Uncharacterised protein family UPF0149 VA249_17670 IPR001269 tRNA-dihydrouridine synthase VA249_17670 IPR035587 DUS-like, FMN-binding domain VA249_17670 IPR032886 tRNA-dihydrouridine(16) synthase VA249_17670 IPR042270 tRNA-dihydrouridine(16) synthase, C-terminal VA249_17670 IPR013785 Aldolase-type TIM barrel VA249_17670 IPR018517 tRNA-dihydrouridine synthase, conserved site VA249_17700 IPR007894 MASE2 VA249_17700 IPR029787 Nucleotide cyclase VA249_17700 IPR000160 GGDEF domain VA249_17710 IPR013780 Glycosyl hydrolase, all-beta VA249_17710 IPR004185 Glycoside hydrolase, family 13, N-terminal Ig-like domain VA249_17710 IPR006047 Glycosyl hydrolase, family 13, catalytic domain VA249_17710 IPR014756 Immunoglobulin E-set VA249_17710 IPR017069 Maltodextrin glucosidase VA249_17710 IPR017853 Glycoside hydrolase superfamily VA249_17720 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_17720 IPR030946 Energy-coupling factor transporter ATP-binding protein EcfA2 VA249_17720 IPR003439 ABC transporter-like VA249_17720 IPR015856 ABC transporter, CbiO/EcfA subunit VA249_17720 IPR017871 ABC transporter, conserved site VA249_17720 IPR003593 AAA+ ATPase domain VA249_17730 IPR001851 ABC transporter, permease VA249_17750 IPR007334 Uncharacterised protein family UPF0208 VA249_17760 IPR023865 Aliphatic acid kinase, short-chain, conserved site VA249_17760 IPR000890 Aliphatic acid kinase, short-chain VA249_17760 IPR004372 Acetate/propionate kinase VA249_17770 IPR042113 Phosphate acetyltransferase, domain 1 VA249_17770 IPR042112 Phosphate acetyltransferase, domain 2 VA249_17770 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily VA249_17770 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_17770 IPR016475 Phosphate acetyltransferase, bacteria VA249_17770 IPR010766 DRTGG VA249_17770 IPR004614 Phosphate acetyltransferase VA249_17770 IPR002505 Phosphate acetyl/butaryl transferase VA249_17780 IPR025105 Domain of unknown function DUF4010 VA249_17790 IPR010987 Glutathione S-transferase, C-terminal-like VA249_17790 IPR036282 Glutathione S-transferase, C-terminal domain superfamily VA249_17790 IPR040079 Glutathione Transferase family VA249_17790 IPR036249 Thioredoxin-like superfamily VA249_17790 IPR016639 Glutathione S-transferase Omega/GSH VA249_17790 IPR004045 Glutathione S-transferase, N-terminal VA249_17800 IPR023696 Ureohydrolase domain superfamily VA249_17800 IPR037138 Histone deacetylase domain superfamily VA249_17800 IPR023801 Histone deacetylase domain VA249_17800 IPR000286 Histone deacetylase family VA249_17810 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein VA249_17810 IPR006059 Bacterial extracellular solute-binding protein VA249_17820 IPR017871 ABC transporter, conserved site VA249_17820 IPR003593 AAA+ ATPase domain VA249_17820 IPR003439 ABC transporter-like VA249_17820 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal VA249_17820 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_17830 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_17830 IPR003593 AAA+ ATPase domain VA249_17830 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal VA249_17830 IPR003439 ABC transporter-like VA249_17830 IPR017871 ABC transporter, conserved site VA249_17840 IPR025966 Oligopeptide transport permease C-like, N-terminal domain VA249_17840 IPR035906 MetI-like superfamily VA249_17840 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VA249_17850 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VA249_17850 IPR035906 MetI-like superfamily VA249_17860 IPR000914 Solute-binding protein family 5 domain VA249_17860 IPR030678 Peptide/nickel binding protein, MppA-type VA249_17860 IPR039424 Solute-binding protein family 5 VA249_17860 IPR023765 Solute-binding protein family 5, conserved site VA249_17870 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily VA249_17870 IPR003448 Molybdopterin biosynthesis MoaE VA249_17880 IPR012675 Beta-grasp domain superfamily VA249_17880 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp VA249_17880 IPR003749 Sulfur carrier ThiS/MoaD-like VA249_17890 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain VA249_17890 IPR023045 Molybdenum cofactor biosynthesis C VA249_17890 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily VA249_17900 IPR008284 Molybdenum cofactor biosynthesis, conserved site VA249_17900 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria VA249_17900 IPR036425 MoaB/Mog-like domain superfamily VA249_17900 IPR001453 MoaB/Mog domain VA249_17900 IPR012245 Molybdenum cofactor biosynthesis protein MoaB VA249_17910 IPR013785 Aldolase-type TIM barrel VA249_17910 IPR006638 Elp3/MiaB/NifB VA249_17910 IPR010505 Molybdenum cofactor synthesis C-terminal VA249_17910 IPR007197 Radical SAM VA249_17910 IPR013483 Molybdenum cofactor biosynthesis protein A VA249_17920 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 VA249_17920 IPR010119 Gluconeogenesis factor VA249_17920 IPR038136 Gluconeogenesis factor superfamily VA249_17930 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain VA249_17930 IPR036641 HPT domain superfamily VA249_17940 IPR003593 AAA+ ATPase domain VA249_17940 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VA249_17940 IPR002078 RNA polymerase sigma factor 54 interaction domain VA249_17940 IPR001789 Signal transduction response regulator, receiver domain VA249_17940 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_17940 IPR002197 DNA binding HTH domain, Fis-type VA249_17940 IPR009057 Homeobox-like domain superfamily VA249_17940 IPR011006 CheY-like superfamily VA249_17940 IPR025944 Sigma-54 interaction domain, conserved site VA249_17950 IPR036876 UVR domain superfamily VA249_17950 IPR006935 Helicase/UvrB, N-terminal VA249_17950 IPR001943 UVR domain VA249_17950 IPR001650 Helicase, C-terminal VA249_17950 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_17950 IPR004807 UvrABC system, subunit B VA249_17950 IPR041471 UvrB, interaction domain VA249_17950 IPR024759 UvrB, YAD/RRR-motif-containing domain VA249_17950 IPR014001 Helicase superfamily 1/2, ATP-binding domain VA249_17960 IPR005949 Formate acetyltransferase VA249_17960 IPR019777 Formate C-acetyltransferase glycine radical, conserved site VA249_17960 IPR001150 Glycine radical domain VA249_17960 IPR004184 Pyruvate formate lyase domain VA249_17970 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA VA249_17970 IPR003667 NqrDE/RnfAE VA249_17980 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VA249_17980 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VA249_17980 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB VA249_17980 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria VA249_17980 IPR007202 4Fe-4S domain VA249_17990 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VA249_17990 IPR026902 RnfC Barrel sandwich hybrid domain VA249_17990 IPR019554 Soluble ligand binding domain VA249_17990 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily VA249_17990 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain VA249_17990 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VA249_17990 IPR009051 Alpha-helical ferredoxin VA249_17990 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC VA249_18000 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD VA249_18000 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D VA249_18010 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG VA249_18010 IPR007329 FMN-binding VA249_18020 IPR003667 NqrDE/RnfAE VA249_18020 IPR010968 Ion-translocating oxidoreductase complex subunit E VA249_18030 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif VA249_18030 IPR004036 Endonuclease III-like, conserved site-2 VA249_18030 IPR011257 DNA glycosylase VA249_18030 IPR004035 Endonuclease III, iron-sulphur binding site VA249_18030 IPR005759 Endonuclease III VA249_18030 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal VA249_18030 IPR000445 Helix-hairpin-helix motif VA249_18030 IPR003265 HhH-GPD domain VA249_18040 IPR004107 Integrase, SAM-like, N-terminal VA249_18040 IPR010998 Integrase/recombinase, N-terminal VA249_18040 IPR023009 Tyrosine recombinase XerC/XerD VA249_18040 IPR011931 Tyrosine recombinase XerC VA249_18040 IPR002104 Integrase, catalytic domain VA249_18040 IPR013762 Integrase-like, catalytic domain superfamily VA249_18040 IPR011010 DNA breaking-rejoining enzyme, catalytic core VA249_18090 IPR041451 RecD-like DNA helicase, SH3 domain VA249_18090 IPR027785 UvrD-like helicase C-terminal domain VA249_18090 IPR006345 RecD-like DNA helicase VA249_18090 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_18090 IPR003593 AAA+ ATPase domain VA249_18090 IPR029493 RecD helicase-like helix-hairpin-helix domain VA249_18110 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VA249_18110 IPR015387 LuxQ, periplasmic VA249_18110 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain VA249_18110 IPR005467 Histidine kinase domain VA249_18110 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VA249_18110 IPR003594 Histidine kinase/HSP90-like ATPase VA249_18110 IPR011006 CheY-like superfamily VA249_18110 IPR035965 PAS domain superfamily VA249_18110 IPR029151 Periplasmic sensor-like domain superfamily VA249_18110 IPR001789 Signal transduction response regulator, receiver domain VA249_18110 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily VA249_18120 IPR025668 Transposase DDE domain VA249_18140 IPR025668 Transposase DDE domain VA249_18170 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VA249_18170 IPR004361 Glyoxalase I VA249_18170 IPR018146 Glyoxalase I, conserved site VA249_18170 IPR037523 Vicinal oxygen chelate (VOC) domain VA249_18170 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VA249_18180 IPR020206 Uncharacterised protein family, VP2110 VA249_18190 IPR036737 OmpA-like domain superfamily VA249_18190 IPR006690 Outer membrane protein, OmpA-like, conserved site VA249_18190 IPR041544 MotY N-terminal domain VA249_18190 IPR006665 OmpA-like domain VA249_18200 IPR036397 Ribonuclease H superfamily VA249_18200 IPR012337 Ribonuclease H-like superfamily VA249_18200 IPR005987 Ribonuclease T VA249_18200 IPR013520 Exonuclease, RNase T/DNA polymerase III VA249_18210 IPR032813 Putative Na+/H+ antiporter, N-terminal VA249_18210 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal VA249_18250 IPR025161 Putative transposase IS4/IS5 family VA249_18260 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site VA249_18260 IPR029056 Ribokinase-like VA249_18260 IPR002139 Ribokinase/fructokinase VA249_18260 IPR011611 Carbohydrate kinase PfkB VA249_18270 IPR006047 Glycosyl hydrolase, family 13, catalytic domain VA249_18270 IPR013780 Glycosyl hydrolase, all-beta VA249_18270 IPR017853 Glycoside hydrolase superfamily VA249_18280 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily VA249_18280 IPR013148 Glycosyl hydrolase family 32, N-terminal VA249_18280 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily VA249_18280 IPR013189 Glycosyl hydrolase family 32, C-terminal VA249_18280 IPR018053 Glycoside hydrolase, family 32, active site VA249_18280 IPR001362 Glycoside hydrolase, family 32 VA249_18300 IPR003593 AAA+ ATPase domain VA249_18300 IPR003439 ABC transporter-like VA249_18300 IPR017871 ABC transporter, conserved site VA249_18300 IPR015855 ABC transporter, maltose/maltodextrin import, MalK VA249_18300 IPR008995 Molybdate/tungstate binding, C-terminal VA249_18300 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_18300 IPR013611 Transport-associated OB, type 2 VA249_18310 IPR023198 Phosphoglycolate phosphatase-like, domain 2 VA249_18310 IPR023214 HAD superfamily VA249_18310 IPR041492 Haloacid dehalogenase-like hydrolase VA249_18310 IPR036412 HAD-like superfamily VA249_18310 IPR010972 Beta-phosphoglucomutase VA249_18310 IPR010976 Beta-phosphoglucomutase hydrolase VA249_18310 IPR006439 HAD hydrolase, subfamily IA VA249_18320 IPR005196 Glycoside hydrolase, family 65, N-terminal VA249_18320 IPR017045 Maltose phosphorylase/glycosyl hydrolase/vacuolar acid trehalase VA249_18320 IPR005195 Glycoside hydrolase, family 65, central catalytic VA249_18320 IPR037018 Glycoside hydrolase family 65, N-terminal domain superfamily VA249_18320 IPR011013 Galactose mutarotase-like domain superfamily VA249_18320 IPR012341 Six-hairpin glycosidase-like superfamily VA249_18320 IPR005194 Glycoside hydrolase family 65, C-terminal VA249_18320 IPR008928 Six-hairpin glycosidase superfamily VA249_18330 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VA249_18330 IPR035906 MetI-like superfamily VA249_18340 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VA249_18340 IPR035906 MetI-like superfamily VA249_18360 IPR010982 Lambda repressor-like, DNA-binding domain superfamily VA249_18360 IPR000843 LacI-type HTH domain VA249_18360 IPR028082 Periplasmic binding protein-like I VA249_18460 IPR033658 Glutaredoxin, PICOT-like VA249_18460 IPR002109 Glutaredoxin VA249_18460 IPR004480 Monothiol glutaredoxin-related VA249_18460 IPR036249 Thioredoxin-like superfamily VA249_18460 IPR014434 Monothiol glutaredoxin VA249_18470 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily VA249_18470 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily VA249_18470 IPR019831 Manganese/iron superoxide dismutase, N-terminal VA249_18470 IPR019833 Manganese/iron superoxide dismutase, binding site VA249_18470 IPR001189 Manganese/iron superoxide dismutase VA249_18470 IPR019832 Manganese/iron superoxide dismutase, C-terminal VA249_18500 IPR016161 Aldehyde/histidinol dehydrogenase VA249_18500 IPR034789 Bifunctional aldehyde-alcohol dehydrogenase, C-terminal domain VA249_18500 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA VA249_18500 IPR018211 Alcohol dehydrogenase, iron-type, conserved site VA249_18500 IPR039697 Iron-type alcohol dehydrogenase-like VA249_18500 IPR016163 Aldehyde dehydrogenase, C-terminal VA249_18500 IPR015590 Aldehyde dehydrogenase domain VA249_18500 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase VA249_18500 IPR016162 Aldehyde dehydrogenase, N-terminal VA249_18510 IPR002771 Multiple antibiotic resistance (MarC)-related VA249_18520 IPR018490 Cyclic nucleotide-binding-like VA249_18520 IPR018488 Cyclic nucleotide-binding, conserved site VA249_18520 IPR000595 Cyclic nucleotide-binding domain VA249_18520 IPR005821 Ion transport domain VA249_18520 IPR014710 RmlC-like jelly roll fold VA249_18520 IPR028325 Voltage-gated potassium channel VA249_18530 IPR036291 NAD(P)-binding domain superfamily VA249_18530 IPR012280 Semialdehyde dehydrogenase, dimerisation domain VA249_18530 IPR000534 Semialdehyde dehydrogenase, NAD-binding VA249_18530 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type VA249_18530 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site VA249_18530 IPR012080 Aspartate-semialdehyde dehydrogenase VA249_18540 IPR004770 Na+/H+ antiporter NhaC VA249_18540 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal VA249_18570 IPR007358 Nucleoid-associated protein NdpA VA249_18580 IPR009857 Uncharacterised protein family UPF0352 VA249_18580 IPR023202 YejL-like superfamily VA249_18590 IPR024588 Inner membrane protein YejM, N-terminal VA249_18590 IPR012159 Inner membrane protein YejM VA249_18590 IPR017850 Alkaline-phosphatase-like, core domain superfamily VA249_18590 IPR000917 Sulfatase, N-terminal VA249_18600 IPR023696 Ureohydrolase domain superfamily VA249_18600 IPR037138 Histone deacetylase domain superfamily VA249_18600 IPR000286 Histone deacetylase family VA249_18600 IPR023801 Histone deacetylase domain VA249_18610 IPR036849 Enolase-like, C-terminal domain superfamily VA249_18610 IPR029017 Enolase-like, N-terminal VA249_18610 IPR029065 Enolase C-terminal domain-like VA249_18610 IPR023592 D-galactonate dehydratase VA249_18610 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site VA249_18610 IPR034593 Mandelate racemase-like VA249_18610 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal VA249_18610 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain VA249_18630 IPR007392 D-galactarate/Altronate dehydratase, C-terminal VA249_18630 IPR013974 SAF domain VA249_18660 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 VA249_18660 IPR003602 DNA topoisomerase, type IA, DNA-binding domain VA249_18660 IPR023405 DNA topoisomerase, type IA, core domain VA249_18660 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 VA249_18660 IPR034144 DNA topoisomerase 3-like, TOPRIM domain VA249_18660 IPR013497 DNA topoisomerase, type IA, central VA249_18660 IPR023406 DNA topoisomerase, type IA, active site VA249_18660 IPR003601 DNA topoisomerase, type IA, domain 2 VA249_18660 IPR000380 DNA topoisomerase, type IA VA249_18660 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 VA249_18660 IPR005738 DNA topoisomerase III VA249_18660 IPR006171 TOPRIM domain VA249_18670 IPR029479 Nitroreductase VA249_18670 IPR000415 Nitroreductase-like VA249_18670 IPR026021 Putative NAD(P)H nitroreductase YdjA-like VA249_18680 IPR013785 Aldolase-type TIM barrel VA249_18680 IPR036188 FAD/NAD(P)-binding domain superfamily VA249_18680 IPR023753 FAD/NAD(P)-binding domain VA249_18680 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal VA249_18690 IPR029045 ClpP/crotonase-like domain superfamily VA249_18690 IPR004634 Peptidase S49, protease IV VA249_18690 IPR004635 Peptidase S49, SppA VA249_18690 IPR002142 Peptidase S49 VA249_18690 IPR033854 Signal peptide peptidase A VA249_18700 IPR027474 L-asparaginase, N-terminal VA249_18700 IPR027473 L-asparaginase, C-terminal VA249_18700 IPR041725 Type I (cytosolic) L-asparaginase VA249_18700 IPR037152 L-asparaginase, N-terminal domain superfamily VA249_18700 IPR040919 Asparaginase/glutaminase, C-terminal VA249_18700 IPR020827 Asparaginase/glutaminase, active site 1 VA249_18700 IPR006034 Asparaginase/glutaminase-like VA249_18700 IPR036152 Asparaginase/glutaminase-like superfamily VA249_18700 IPR006033 Type I L-asparaginase family VA249_18700 IPR027475 Asparaginase/glutaminase, active site 2 VA249_18710 IPR009749 Protein of unknown function DUF1315 VA249_18730 IPR028427 Peptide methionine sulfoxide reductase VA249_18730 IPR002579 Peptide methionine sulphoxide reductase MrsB VA249_18730 IPR011057 Mss4-like superfamily VA249_18740 IPR036291 NAD(P)-binding domain superfamily VA249_18740 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family VA249_18740 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site VA249_18740 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain VA249_18740 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain VA249_18740 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I VA249_18750 IPR014718 Glycoside hydrolase-type carbohydrate-binding VA249_18750 IPR025532 Glucose-6-phosphate 1-epimerase VA249_18750 IPR011013 Galactose mutarotase-like domain superfamily VA249_18750 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase VA249_18760 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted VA249_18760 IPR025714 Methyltransferase domain VA249_18760 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VA249_18790 IPR000060 BCCT transporter family VA249_18800 IPR001036 Acriflavin resistance protein VA249_18800 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VA249_18810 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VA249_18810 IPR006143 RND efflux pump, membrane fusion protein VA249_18850 IPR023727 Lysophospholipid transporter LplT VA249_18850 IPR011701 Major facilitator superfamily VA249_18850 IPR036259 MFS transporter superfamily VA249_18860 IPR018383 Uncharacterised protein family UPF0324, prokaryote VA249_18880 IPR025110 AMP-binding enzyme, C-terminal domain VA249_18880 IPR020845 AMP-binding, conserved site VA249_18880 IPR000873 AMP-dependent synthetase/ligase VA249_18880 IPR042099 AMP-dependent synthetase-like superfamily VA249_18880 IPR010192 2-succinylbenzoate--CoA ligase VA249_18890 IPR029065 Enolase C-terminal domain-like VA249_18890 IPR010196 o-Succinylbenzoate synthase, MenC type1 VA249_18890 IPR036849 Enolase-like, C-terminal domain superfamily VA249_18890 IPR029017 Enolase-like, N-terminal VA249_18890 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal VA249_18900 IPR029045 ClpP/crotonase-like domain superfamily VA249_18900 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB VA249_18900 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site VA249_18900 IPR001753 Enoyl-CoA hydratase/isomerase VA249_18900 IPR014748 Enoyl-CoA hydratase, C-terminal VA249_18910 IPR029058 Alpha/Beta hydrolase fold VA249_18910 IPR000073 Alpha/beta hydrolase fold-1 VA249_18910 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase VA249_18920 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding VA249_18920 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase VA249_18920 IPR032264 Menaquinone biosynthesis protein MenD, middle domain VA249_18920 IPR029061 Thiamin diphosphate-binding fold VA249_18920 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain VA249_18930 IPR005801 ADC synthase VA249_18930 IPR004561 Isochorismate synthase VA249_18930 IPR034681 Isochorismate synthase MenF VA249_18930 IPR015890 Chorismate-utilising enzyme, C-terminal VA249_18940 IPR004839 Aminotransferase, class I/classII VA249_18940 IPR015424 Pyridoxal phosphate-dependent transferase VA249_18940 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 VA249_18940 IPR015421 Pyridoxal phosphate-dependent transferase, major domain VA249_18950 IPR003607 HD/PDEase domain VA249_18950 IPR022971 5'-deoxynucleotidase YfbR VA249_18950 IPR039356 Metal-dependent nucleoside 5'-monophosphatase VA249_18960 IPR026875 Phosphohydrolase-associated domain VA249_18960 IPR006674 HD domain VA249_18960 IPR006261 dNTP triphosphohydrolase VA249_18960 IPR023023 dNTP triphosphohydrolase, type 2 VA249_18960 IPR003607 HD/PDEase domain VA249_18990 IPR004509 Competence protein ComEA, helix-hairpin-helix domain VA249_18990 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 VA249_18990 IPR010994 RuvA domain 2-like VA249_19000 IPR027304 Trigger factor/SurA domain superfamily VA249_19000 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site VA249_19000 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type VA249_19010 IPR000119 Histone-like DNA-binding protein VA249_19010 IPR020816 Histone-like DNA-binding protein, conserved site VA249_19010 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily VA249_19020 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VA249_19020 IPR020568 Ribosomal protein S5 domain 2-type fold VA249_19020 IPR015947 PUA-like superfamily VA249_19020 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_19020 IPR003111 Lon, substrate-binding domain VA249_19020 IPR027065 Lon protease VA249_19020 IPR008269 Peptidase S16, Lon proteolytic domain VA249_19020 IPR004815 Lon protease, bacterial/eukaryotic-type VA249_19020 IPR027543 Lon protease, bacterial VA249_19020 IPR003959 ATPase, AAA-type, core VA249_19020 IPR003593 AAA+ ATPase domain VA249_19030 IPR038366 Zinc finger, ClpX C4-type superfamily VA249_19030 IPR010603 Zinc finger, ClpX C4-type VA249_19030 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_19030 IPR003959 ATPase, AAA-type, core VA249_19030 IPR019489 Clp ATPase, C-terminal VA249_19030 IPR003593 AAA+ ATPase domain VA249_19030 IPR004487 Clp protease, ATP-binding subunit ClpX VA249_19040 IPR001907 ATP-dependent Clp protease proteolytic subunit VA249_19040 IPR029045 ClpP/crotonase-like domain superfamily VA249_19040 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA VA249_19040 IPR033135 ClpP, histidine active site VA249_19040 IPR018215 ClpP, Ser active site VA249_19050 IPR027304 Trigger factor/SurA domain superfamily VA249_19050 IPR036611 Trigger factor ribosome-binding domain superfamily VA249_19050 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain VA249_19050 IPR037041 Trigger factor, C-terminal domain superfamily VA249_19050 IPR008880 Trigger factor, C-terminal VA249_19050 IPR005215 Trigger factor VA249_19050 IPR008881 Trigger factor, ribosome-binding, bacterial VA249_19070 IPR003846 Protein adenylyltransferase SelO VA249_19090 IPR003445 Cation transporter VA249_19090 IPR004772 TrkH potassium transport family VA249_19100 IPR003148 Regulator of K+ conductance, N-terminal VA249_19100 IPR036291 NAD(P)-binding domain superfamily VA249_19100 IPR006037 Regulator of K+ conductance, C-terminal VA249_19100 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily VA249_19110 IPR011545 DEAD/DEAH box helicase domain VA249_19110 IPR014001 Helicase superfamily 1/2, ATP-binding domain VA249_19110 IPR001650 Helicase, C-terminal VA249_19110 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_19110 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VA249_19110 IPR014014 RNA helicase, DEAD-box type, Q motif VA249_19110 IPR028622 ATP-dependent RNA helicase RhlE VA249_19120 IPR005170 Transporter-associated domain VA249_19120 IPR000644 CBS domain VA249_19120 IPR002550 CNNM, transmembrane domain VA249_19120 IPR036318 FAD-binding, type PCMH-like superfamily VA249_19120 IPR016169 FAD-binding, type PCMH, subdomain 2 VA249_19150 IPR004090 Chemotaxis methyl-accepting receptor VA249_19150 IPR033479 Double Cache domain 1 VA249_19150 IPR003660 HAMP domain VA249_19150 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VA249_19150 IPR029151 Periplasmic sensor-like domain superfamily VA249_19150 IPR000727 Target SNARE coiled-coil homology domain VA249_19240 IPR019650 Protein of unknown function DUF2513 VA249_19290 IPR036291 NAD(P)-binding domain superfamily VA249_19290 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase VA249_19290 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain VA249_19290 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site VA249_19290 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain VA249_19300 IPR002668 Concentrative nucleoside transporter N-terminal domain VA249_19300 IPR011657 Concentrative nucleoside transporter C-terminal domain VA249_19300 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain VA249_19300 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial VA249_19300 IPR008276 Concentrative nucleoside transporter VA249_19310 IPR005119 LysR, substrate-binding VA249_19310 IPR000847 Transcription regulator HTH, LysR VA249_19310 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_19310 IPR036390 Winged helix DNA-binding domain superfamily VA249_19320 IPR011757 Lytic transglycosylase MltB VA249_19320 IPR031304 Transglycosylase SLT domain 2 VA249_19320 IPR023346 Lysozyme-like domain superfamily VA249_19330 IPR038068 YcgL-like superfamily VA249_19330 IPR027354 YcgL domain VA249_19340 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal VA249_19340 IPR005526 Septum formation inhibitor MinC, C-terminal VA249_19340 IPR007874 Septum formation inhibitor MinC, N-terminal VA249_19340 IPR013033 Septum formation inhibitor MinC VA249_19340 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily VA249_19340 IPR038061 MinC, Proteobacteria, N-terminal domain superfamily VA249_19350 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_19350 IPR025501 ATP binding protein MinD VA249_19350 IPR010223 ATP binding protein MinD, bacterial-type VA249_19350 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain VA249_19360 IPR005527 Cell division topological specificity factor MinE VA249_19360 IPR036707 Cell division topological specificity factor MinE superfamily VA249_19370 IPR002121 HRDC domain VA249_19370 IPR010997 HRDC-like superfamily VA249_19370 IPR036397 Ribonuclease H superfamily VA249_19370 IPR002562 3'-5' exonuclease domain VA249_19370 IPR006292 Ribonuclease D VA249_19370 IPR012337 Ribonuclease H-like superfamily VA249_19380 IPR025110 AMP-binding enzyme, C-terminal domain VA249_19380 IPR020845 AMP-binding, conserved site VA249_19380 IPR000873 AMP-dependent synthetase/ligase VA249_19380 IPR042099 AMP-dependent synthetase-like superfamily VA249_19390 IPR000073 Alpha/beta hydrolase fold-1 VA249_19390 IPR029058 Alpha/Beta hydrolase fold VA249_19390 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase VA249_19420 IPR000905 Gcp-like domain VA249_19420 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB VA249_19430 IPR006555 ATP-dependent helicase, C-terminal VA249_19430 IPR014001 Helicase superfamily 1/2, ATP-binding domain VA249_19430 IPR006935 Helicase/UvrB, N-terminal VA249_19430 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_19430 IPR014013 Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type VA249_19440 IPR041729 Formyltetrahydrofolate deformylase, C-terminal hydrolase domain VA249_19440 IPR002912 ACT domain VA249_19440 IPR004810 Formyltetrahydrofolate deformylase VA249_19440 IPR036477 Formyl transferase, N-terminal domain superfamily VA249_19440 IPR002376 Formyl transferase, N-terminal VA249_19450 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VA249_19450 IPR010393 Protein of unknown function DUF991 VA249_19460 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site VA249_19460 IPR001278 Arginine-tRNA ligase VA249_19460 IPR005148 Arginyl tRNA synthetase N-terminal domain VA249_19460 IPR035684 Arginyl-tRNA synthetase, catalytic core domain VA249_19460 IPR008909 DALR anticodon binding VA249_19460 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VA249_19460 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding VA249_19460 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily VA249_19490 IPR005225 Small GTP-binding protein domain VA249_19490 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain VA249_19490 IPR030389 FeoB-type guanine nucleotide-binding (G) domain VA249_19490 IPR003373 Ferrous iron transport protein B VA249_19490 IPR041069 FeoB, cytosolic helical domain VA249_19490 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_19490 IPR011640 Ferrous iron transport protein B, C-terminal VA249_19500 IPR008988 Transcriptional repressor, C-terminal VA249_19500 IPR038157 Ferrous iron transporter, core domain VA249_19500 IPR007167 Ferrous iron transporter FeoA domain VA249_19510 IPR009057 Homeobox-like domain superfamily VA249_19510 IPR018060 DNA binding HTH domain, AraC-type VA249_19510 IPR014710 RmlC-like jelly roll fold VA249_19510 IPR020449 Transcription regulator HTH, AraC- type VA249_19510 IPR023609 Transcription regulator HTH, RhaS VA249_19510 IPR003313 AraC-type arabinose-binding/dimerisation domain VA249_19510 IPR011051 RmlC-like cupin domain superfamily VA249_19520 IPR035520 High-affinity zinc uptake system protein ZnuA VA249_19520 IPR006127 Periplasmic solute binding protein, ZnuA-like VA249_19530 IPR003439 ABC transporter-like VA249_19530 IPR017882 Zinc import ATP-binding protein ZnuC VA249_19530 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_19530 IPR003593 AAA+ ATPase domain VA249_19540 IPR001626 ABC transporter, TroCD-like VA249_19540 IPR037294 ABC transporter, BtuC-like VA249_19550 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site VA249_19550 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site VA249_19550 IPR003781 CoA-binding VA249_19550 IPR005810 Succinyl-CoA ligase, alpha subunit VA249_19550 IPR005811 ATP-citrate lyase/succinyl-CoA ligase VA249_19550 IPR036291 NAD(P)-binding domain superfamily VA249_19550 IPR016102 Succinyl-CoA synthetase-like VA249_19560 IPR005809 Succinate--CoA synthetase, beta subunit VA249_19560 IPR016102 Succinyl-CoA synthetase-like VA249_19560 IPR013815 ATP-grasp fold, subdomain 1 VA249_19560 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type VA249_19560 IPR011761 ATP-grasp fold VA249_19560 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site VA249_19560 IPR005811 ATP-citrate lyase/succinyl-CoA ligase VA249_19570 IPR006255 Dihydrolipoamide succinyltransferase VA249_19570 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site VA249_19570 IPR004167 Peripheral subunit-binding domain VA249_19570 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain VA249_19570 IPR000089 Biotin/lipoyl attachment VA249_19570 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily VA249_19570 IPR011053 Single hybrid motif VA249_19570 IPR036625 E3-binding domain superfamily VA249_19580 IPR005475 Transketolase-like, pyrimidine-binding domain VA249_19580 IPR042179 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal domain superfamily VA249_19580 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal VA249_19580 IPR001017 Dehydrogenase, E1 component VA249_19580 IPR011603 2-oxoglutarate dehydrogenase E1 component VA249_19580 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain VA249_19580 IPR029061 Thiamin diphosphate-binding fold VA249_19590 IPR036010 2Fe-2S ferredoxin-like superfamily VA249_19590 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain VA249_19590 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VA249_19590 IPR012675 Beta-grasp domain superfamily VA249_19590 IPR009051 Alpha-helical ferredoxin VA249_19590 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein VA249_19590 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal VA249_19590 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VA249_19600 IPR011281 Succinate dehydrogenase, flavoprotein subunit VA249_19600 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily VA249_19600 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit VA249_19600 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily VA249_19600 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal VA249_19600 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site VA249_19600 IPR036188 FAD/NAD(P)-binding domain superfamily VA249_19600 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain VA249_19610 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit VA249_19610 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor VA249_19610 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit VA249_19620 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit VA249_19620 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit VA249_19620 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site VA249_19620 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit VA249_19630 IPR016142 Citrate synthase-like, large alpha subdomain VA249_19630 IPR016143 Citrate synthase-like, small alpha subdomain VA249_19630 IPR002020 Citrate synthase VA249_19630 IPR019810 Citrate synthase active site VA249_19630 IPR024176 Citrate synthase, bacterial-type VA249_19630 IPR036969 Citrate synthase superfamily VA249_19630 IPR010953 Citrate synthase, type I VA249_19640 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily VA249_19640 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 VA249_19660 IPR005852 Phosphoglucomutase, alpha-D-glucose specific VA249_19660 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I VA249_19660 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III VA249_19660 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II VA249_19660 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III VA249_19660 IPR005843 Alpha-D-phosphohexomutase, C-terminal VA249_19660 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily VA249_19660 IPR016066 Alpha-D-phosphohexomutase, conserved site VA249_19670 IPR010985 Ribbon-helix-helix VA249_19670 IPR005621 Negative modulator of initiation of replication SeqA VA249_19670 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain VA249_19670 IPR036835 Replication modulator SeqA, C-terminal DNA-binding domain superfamily VA249_19670 IPR033761 Negative modulator of initiation of replication SeqA, N-terminal VA249_19670 IPR013321 Arc-type ribbon-helix-helix VA249_19680 IPR000073 Alpha/beta hydrolase fold-1 VA249_19680 IPR029058 Alpha/Beta hydrolase fold VA249_19700 IPR008254 Flavodoxin/nitric oxide synthase VA249_19700 IPR010086 Flavodoxin, long chain VA249_19700 IPR029039 Flavoprotein-like superfamily VA249_19700 IPR001226 Flavodoxin, conserved site VA249_19710 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site VA249_19710 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 VA249_19710 IPR036291 NAD(P)-binding domain superfamily VA249_19710 IPR000534 Semialdehyde dehydrogenase, NAD-binding VA249_19710 IPR012280 Semialdehyde dehydrogenase, dimerisation domain VA249_19720 IPR002481 Ferric-uptake regulator VA249_19720 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_19720 IPR036390 Winged helix DNA-binding domain superfamily VA249_19730 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VA249_19730 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily VA249_19730 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal VA249_19730 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily VA249_19730 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain VA249_19730 IPR000924 Glutamyl/glutaminyl-tRNA synthetase VA249_19730 IPR022861 Glutamine-tRNA ligase, bacterial VA249_19730 IPR004514 Glutamine-tRNA synthetase VA249_19730 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site VA249_19730 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain VA249_19740 IPR003352 Phosphotransferase system, EIIC VA249_19740 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component VA249_19740 IPR001996 Phosphotransferase system, IIB component, type 1 VA249_19740 IPR013013 Phosphotransferase system, EIIC component, type 1 VA249_19740 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 VA249_19740 IPR036878 Glucose permease domain IIB VA249_19740 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site VA249_19740 IPR011055 Duplicated hybrid motif VA249_19750 IPR006680 Amidohydrolase-related VA249_19750 IPR003764 N-acetylglucosamine-6-phosphate deacetylase VA249_19750 IPR011059 Metal-dependent hydrolase, composite domain superfamily VA249_19750 IPR032466 Metal-dependent hydrolase VA249_19760 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_19760 IPR000835 MarR-type HTH domain VA249_19760 IPR000600 ROK family VA249_19760 IPR036390 Winged helix DNA-binding domain superfamily VA249_19770 IPR006153 Cation/H+ exchanger VA249_19770 IPR036291 NAD(P)-binding domain superfamily VA249_19770 IPR003148 Regulator of K+ conductance, N-terminal VA249_19770 IPR038770 Sodium/solute symporter superfamily VA249_19770 IPR004771 K+/H+ exchanger VA249_19780 IPR029055 Nucleophile aminohydrolases, N-terminal VA249_19780 IPR006426 Asparagine synthase, glutamine-hydrolyzing VA249_19780 IPR001962 Asparagine synthase VA249_19780 IPR033738 Asparagine synthase, N-terminal domain VA249_19780 IPR017932 Glutamine amidotransferase type 2 domain VA249_19780 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VA249_19790 IPR010215 Transcription antitermination protein RfaH VA249_19790 IPR036735 NusG, N-terminal domain superfamily VA249_19790 IPR006645 NusG, N-terminal VA249_19800 IPR020846 Major facilitator superfamily domain VA249_19800 IPR005279 Dipeptide/tripeptide permease VA249_19800 IPR036259 MFS transporter superfamily VA249_19800 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site VA249_19800 IPR000109 Proton-dependent oligopeptide transporter family VA249_19810 IPR001015 Ferrochelatase VA249_19810 IPR033644 Ferrochelatase, C-terminal VA249_19810 IPR033659 Ferrochelatase, N-terminal VA249_19810 IPR019772 Ferrochelatase, active site VA249_19820 IPR006259 Adenylate kinase subfamily VA249_19820 IPR000850 Adenylate kinase/UMP-CMP kinase VA249_19820 IPR033690 Adenylate kinase, conserved site VA249_19820 IPR007862 Adenylate kinase, active site lid domain VA249_19820 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_19830 IPR020568 Ribosomal protein S5 domain 2-type fold VA249_19830 IPR020575 Heat shock protein Hsp90, N-terminal VA249_19830 IPR001404 Heat shock protein Hsp90 family VA249_19830 IPR003594 Histidine kinase/HSP90-like ATPase VA249_19830 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VA249_19830 IPR019805 Heat shock protein Hsp90, conserved site VA249_19830 IPR037196 HSP90, C-terminal domain VA249_19840 IPR001867 OmpR/PhoB-type DNA-binding domain VA249_19840 IPR016032 Signal transduction response regulator, C-terminal effector VA249_19840 IPR039420 Transcriptional regulatory protein WalR-like VA249_19840 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_19850 IPR035288 Trans-membrane regulatory protein ToxS VA249_19880 IPR024654 Calcineurin-like phosphoesterase domain, lpxH-type VA249_19880 IPR000979 Phosphodiesterase MJ0936/Vps29 VA249_19880 IPR041802 YfcE-like, metallophosphatase domain VA249_19880 IPR029052 Metallo-dependent phosphatase-like VA249_19880 IPR020935 Phosphodiesterase YfcE, conserved site VA249_19890 IPR013549 Domain of unknown function DUF1731 VA249_19890 IPR001509 NAD-dependent epimerase/dehydratase VA249_19890 IPR036291 NAD(P)-binding domain superfamily VA249_19890 IPR010099 Epimerase family protein SDR39U1 VA249_19900 IPR036291 NAD(P)-binding domain superfamily VA249_19900 IPR020904 Short-chain dehydrogenase/reductase, conserved site VA249_19900 IPR002347 Short-chain dehydrogenase/reductase SDR VA249_19910 IPR013766 Thioredoxin domain VA249_19910 IPR036249 Thioredoxin-like superfamily VA249_19910 IPR011990 Tetratricopeptide-like helical domain superfamily VA249_19920 IPR032435 Band 7, C-terminal extension VA249_19920 IPR018080 Band 7/stomatin-like, conserved site VA249_19920 IPR036013 Band 7/SPFH domain superfamily VA249_19920 IPR001107 Band 7 domain VA249_19920 IPR001972 Stomatin family VA249_19930 IPR002810 NfeD-like, C-terminal domain VA249_19960 IPR005318 Outer membrane porin, bacterial VA249_19960 IPR023614 Porin domain superfamily VA249_19970 IPR012340 Nucleic acid-binding, OB-fold VA249_19970 IPR004150 NAD-dependent DNA ligase, OB-fold VA249_19970 IPR010994 RuvA domain 2-like VA249_19970 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type VA249_19970 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 VA249_19970 IPR013840 NAD-dependent DNA ligase, N-terminal VA249_19970 IPR013839 NAD-dependent DNA ligase, adenylation VA249_19970 IPR001679 NAD-dependent DNA ligase VA249_19970 IPR033136 NAD-dependent DNA ligase, conserved site VA249_19970 IPR018239 NAD-dependent DNA ligase, active site VA249_19970 IPR041663 DisA/LigA, helix-hairpin-helix motif VA249_19970 IPR036420 BRCT domain superfamily VA249_19970 IPR001357 BRCT domain VA249_19980 IPR007449 ZipA, C-terminal FtsZ-binding domain VA249_19980 IPR011919 Cell division protein ZipA VA249_19980 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily VA249_19990 IPR022985 Sulfate transporter CysZ VA249_20000 IPR005856 Cysteine synthase VA249_20000 IPR005859 Cysteine synthase CysK VA249_20000 IPR001926 Pyridoxal-phosphate dependent enzyme VA249_20000 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme VA249_20000 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site VA249_20010 IPR000032 Phosphocarrier protein HPr-like VA249_20010 IPR035895 HPr-like superfamily VA249_20010 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site VA249_20010 IPR002114 Phosphotransferase system, HPr serine phosphorylation site VA249_20020 IPR024692 Phosphotransferase system, enzyme I VA249_20020 IPR036637 Phosphohistidine domain superfamily VA249_20020 IPR006318 Phosphotransferase system, enzyme I-like VA249_20020 IPR023151 PEP-utilising enzyme, conserved site VA249_20020 IPR000121 PEP-utilising enzyme, C-terminal VA249_20020 IPR008731 Phosphotransferase system, enzyme I N-terminal VA249_20020 IPR036618 PtsI, HPr-binding domain superfamily VA249_20020 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily VA249_20020 IPR040442 Pyruvate kinase-like domain superfamily VA249_20020 IPR008279 PEP-utilising enzyme, mobile domain VA249_20020 IPR018274 PEP-utilising enzyme, active site VA249_20030 IPR011055 Duplicated hybrid motif VA249_20030 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 VA249_20040 IPR010810 Flagellin hook, IN motif VA249_20040 IPR001029 Flagellin, D0/D1 domain VA249_20040 IPR042187 Flagellin, C-terminal domain, subdomain 2 VA249_20040 IPR001492 Flagellin VA249_20050 IPR001492 Flagellin VA249_20050 IPR001029 Flagellin, D0/D1 domain VA249_20050 IPR010810 Flagellin hook, IN motif VA249_20050 IPR042187 Flagellin, C-terminal domain, subdomain 2 VA249_20070 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VA249_20070 IPR010810 Flagellin hook, IN motif VA249_20070 IPR002371 Flagellar hook-associated protein 1 VA249_20080 IPR019301 Flagellar protein FlgJ, N-terminal VA249_20080 IPR013377 Peptidoglycan hydrolase FlgJ VA249_20080 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain VA249_20090 IPR001782 Flagellar P-ring protein VA249_20100 IPR000527 Flagellar L-ring protein VA249_20110 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VA249_20110 IPR020013 Flagellar hook-basal body protein, FlgE/F/G VA249_20110 IPR019776 Flagellar basal body rod protein, conserved site VA249_20110 IPR001444 Flagellar basal body rod protein, N-terminal VA249_20110 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like VA249_20110 IPR012834 Flagellar basal-body rod FlgG VA249_20120 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VA249_20120 IPR019776 Flagellar basal body rod protein, conserved site VA249_20120 IPR001444 Flagellar basal body rod protein, N-terminal VA249_20120 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like VA249_20120 IPR020013 Flagellar hook-basal body protein, FlgE/F/G VA249_20130 IPR001444 Flagellar basal body rod protein, N-terminal VA249_20130 IPR019776 Flagellar basal body rod protein, conserved site VA249_20130 IPR011491 Flagellar hook protein FlgE VA249_20130 IPR037058 Flagellar hook protein FlgE superfamily VA249_20130 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VA249_20130 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like VA249_20130 IPR020013 Flagellar hook-basal body protein, FlgE/F/G VA249_20140 IPR005648 Flagellar hook capping protein VA249_20140 IPR025965 FlgD Ig-like domain VA249_20140 IPR025963 FlgD Tudor-like domain VA249_20150 IPR006299 Flagellar basal-body rod protein FlgC VA249_20150 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VA249_20150 IPR001444 Flagellar basal body rod protein, N-terminal VA249_20150 IPR019776 Flagellar basal body rod protein, conserved site VA249_20160 IPR001444 Flagellar basal body rod protein, N-terminal VA249_20160 IPR019776 Flagellar basal body rod protein, conserved site VA249_20160 IPR006300 Flagellar basal-body rod protein FlgB VA249_20170 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily VA249_20170 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal VA249_20170 IPR000780 MCP methyltransferase, CheR-type VA249_20170 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal VA249_20170 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VA249_20180 IPR001789 Signal transduction response regulator, receiver domain VA249_20180 IPR011006 CheY-like superfamily VA249_20180 IPR024181 Chemotaxis response regulator CheV VA249_20180 IPR036061 CheW-like domain superfamily VA249_20180 IPR002545 CheW-like domain VA249_20260 IPR036737 OmpA-like domain superfamily VA249_20260 IPR006690 Outer membrane protein, OmpA-like, conserved site VA249_20260 IPR006665 OmpA-like domain VA249_20260 IPR000498 Outer membrane protein OmpA-like, transmembrane domain VA249_20260 IPR006664 Outer membrane protein, bacterial VA249_20260 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VA249_20260 IPR002368 Outer membrane protein, OmpA VA249_20270 IPR033910 Glutamyl-tRNA synthetase VA249_20270 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding VA249_20270 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 VA249_20270 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site VA249_20270 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial VA249_20270 IPR000924 Glutamyl/glutaminyl-tRNA synthetase VA249_20270 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain VA249_20270 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VA249_20280 IPR023299 P-type ATPase, cytoplasmic domain N VA249_20280 IPR018303 P-type ATPase, phosphorylation site VA249_20280 IPR036163 Heavy metal-associated domain superfamily VA249_20280 IPR027256 P-type ATPase, subfamily IB VA249_20280 IPR006121 Heavy metal-associated domain, HMA VA249_20280 IPR017969 Heavy-metal-associated, conserved site VA249_20280 IPR023214 HAD superfamily VA249_20280 IPR036412 HAD-like superfamily VA249_20280 IPR001757 P-type ATPase VA249_20280 IPR023298 P-type ATPase, transmembrane domain superfamily VA249_20280 IPR008250 P-type ATPase, A domain superfamily VA249_20320 IPR029018 Beta-hexosaminidase-like, domain 2 VA249_20320 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily VA249_20320 IPR012291 CBM2, carbohydrate-binding domain superfamily VA249_20320 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain VA249_20320 IPR004867 Chitobiase C-terminal domain VA249_20320 IPR015883 Glycoside hydrolase family 20, catalytic domain VA249_20320 IPR017853 Glycoside hydrolase superfamily VA249_20320 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal VA249_20320 IPR025705 Beta-hexosaminidase VA249_20320 IPR013783 Immunoglobulin-like fold VA249_20320 IPR014756 Immunoglobulin E-set VA249_20340 IPR036063 Smr domain superfamily VA249_20340 IPR002625 Smr domain VA249_20350 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F VA249_20350 IPR006145 Pseudouridine synthase, RsuA/RluA VA249_20350 IPR020103 Pseudouridine synthase, catalytic domain superfamily VA249_20350 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain VA249_20350 IPR002942 RNA-binding S4 domain VA249_20350 IPR036986 RNA-binding S4 domain superfamily VA249_20350 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site VA249_20360 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain VA249_20360 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily VA249_20360 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC VA249_20370 IPR008334 5'-Nucleotidase, C-terminal VA249_20370 IPR036907 5'-Nucleotidase, C-terminal domain superfamily VA249_20370 IPR006146 5'-Nucleotidase, conserved site VA249_20370 IPR006179 5'-Nucleotidase/apyrase VA249_20370 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type VA249_20370 IPR029052 Metallo-dependent phosphatase-like VA249_20380 IPR006218 DAHP synthetase I/KDSA VA249_20380 IPR006269 3-deoxy-8-phosphooctulonate synthase VA249_20380 IPR013785 Aldolase-type TIM barrel VA249_20390 IPR011990 Tetratricopeptide-like helical domain superfamily VA249_20390 IPR032698 Protein SirB1, N-terminal VA249_20400 IPR007360 Invasion gene expression up-regulator, SirB VA249_20410 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific VA249_20410 IPR040758 Release factor glutamine methyltransferase, N-terminal domain VA249_20410 IPR025714 Methyltransferase domain VA249_20410 IPR004556 Methyltransferase HemK-like VA249_20410 IPR002052 DNA methylase, N-6 adenine-specific, conserved site VA249_20410 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VA249_20420 IPR005139 Peptide chain release factor VA249_20420 IPR004373 Peptide chain release factor 1 VA249_20420 IPR000352 Peptide chain release factor class I VA249_20430 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily VA249_20430 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase VA249_20430 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain VA249_20430 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal VA249_20430 IPR018214 Glutamyl-tRNA reductase, conserved site VA249_20430 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily VA249_20430 IPR036291 NAD(P)-binding domain superfamily VA249_20430 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase VA249_20440 IPR029046 Lipoprotein localisation LolA/LolB/LppX VA249_20440 IPR004565 Outer membrane lipoprotein LolB VA249_20450 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VA249_20450 IPR006204 GHMP kinase N-terminal domain VA249_20450 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase VA249_20450 IPR020568 Ribosomal protein S5 domain 2-type fold VA249_20450 IPR013750 GHMP kinase, C-terminal domain VA249_20450 IPR036554 GHMP kinase, C-terminal domain superfamily VA249_20460 IPR029057 Phosphoribosyltransferase-like VA249_20460 IPR000836 Phosphoribosyltransferase domain VA249_20460 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain VA249_20460 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site VA249_20460 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type VA249_20460 IPR005946 Ribose-phosphate pyrophosphokinase VA249_20470 IPR018171 Peptidyl-tRNA hydrolase, conserved site VA249_20470 IPR036416 Peptidyl-tRNA hydrolase superfamily VA249_20470 IPR001328 Peptidyl-tRNA hydrolase VA249_20480 IPR041706 YchF, N-terminal VA249_20480 IPR012675 Beta-grasp domain superfamily VA249_20480 IPR031167 OBG-type guanine nucleotide-binding (G) domain VA249_20480 IPR006073 GTP binding domain VA249_20480 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_20480 IPR004095 TGS VA249_20480 IPR012676 TGS-like VA249_20480 IPR023192 TGS-like domain superfamily VA249_20480 IPR013029 YchF, C-terminal domain VA249_20480 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 VA249_20490 IPR002938 FAD-binding domain VA249_20490 IPR036188 FAD/NAD(P)-binding domain superfamily VA249_20490 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site VA249_20490 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 VA249_20500 IPR020612 Methylthiotransferase, conserved site VA249_20500 IPR038135 Methylthiotransferase, N-terminal domain superfamily VA249_20500 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB VA249_20500 IPR006638 Elp3/MiaB/NifB VA249_20500 IPR005839 Methylthiotransferase VA249_20500 IPR007197 Radical SAM VA249_20500 IPR023404 Radical SAM, alpha/beta horseshoe VA249_20500 IPR002792 TRAM domain VA249_20500 IPR013848 Methylthiotransferase, N-terminal VA249_20510 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_20510 IPR003714 PhoH-like protein VA249_20520 IPR023091 Metalloprotease catalytic domain superfamily, predicted VA249_20520 IPR002036 Endoribonuclease YbeY VA249_20520 IPR020549 Endoribonuclease YbeY, conserved site VA249_20530 IPR000644 CBS domain VA249_20530 IPR016169 FAD-binding, type PCMH, subdomain 2 VA249_20530 IPR005170 Transporter-associated domain VA249_20530 IPR036318 FAD-binding, type PCMH-like superfamily VA249_20540 IPR004563 Apolipoprotein N-acyltransferase VA249_20540 IPR003010 Carbon-nitrogen hydrolase VA249_20540 IPR036526 Carbon-nitrogen hydrolase superfamily VA249_20550 IPR009912 Zinc-ribbon containing domain VA249_20560 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding VA249_20560 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding VA249_20560 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VA249_20560 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain VA249_20560 IPR002300 Aminoacyl-tRNA synthetase, class Ia VA249_20560 IPR002302 Leucine-tRNA ligase VA249_20560 IPR025709 Leucyl-tRNA synthetase, editing domain VA249_20560 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site VA249_20570 IPR007485 LPS-assembly lipoprotein LptE VA249_20580 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal VA249_20580 IPR032780 DNA polymerase III subunit delta, C-terminal VA249_20580 IPR010372 DNA polymerase III delta, N-terminal VA249_20580 IPR005790 DNA polymerase III, delta subunit VA249_20580 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_20590 IPR004394 Protein Iojap/ribosomal silencing factor RsfS VA249_20600 IPR029028 Alpha/beta knot methyltransferases VA249_20600 IPR003742 RNA methyltransferase RlmH VA249_20600 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VA249_20610 IPR017790 Penicillin-binding protein 2 VA249_20610 IPR001460 Penicillin-binding protein, transpeptidase VA249_20610 IPR036138 Penicillin-binding protein, dimerisation domain superfamily VA249_20610 IPR012338 Beta-lactamase/transpeptidase-like VA249_20610 IPR005311 Penicillin-binding protein, dimerisation domain VA249_20620 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site VA249_20620 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA VA249_20620 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB VA249_20630 IPR034718 Endolytic peptidoglycan transglycosylase RlpA VA249_20630 IPR009009 RlpA-like protein, double-psi beta-barrel domain VA249_20630 IPR036908 RlpA-like domain superfamily VA249_20630 IPR012997 Rare lipoprotein A VA249_20630 IPR007730 Sporulation-like domain VA249_20630 IPR036680 Sporulation-like domain superfamily VA249_20640 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A VA249_20640 IPR012338 Beta-lactamase/transpeptidase-like VA249_20640 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily VA249_20640 IPR015956 Penicillin-binding protein, C-terminal domain superfamily VA249_20640 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal VA249_20640 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal VA249_20650 IPR007454 Uncharacterised protein family UPF0250 VA249_20650 IPR027471 YbeD-like domain superfamily VA249_20660 IPR020605 Octanoyltransferase, conserved site VA249_20660 IPR000544 Octanoyltransferase VA249_20660 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain VA249_20670 IPR006638 Elp3/MiaB/NifB VA249_20670 IPR013785 Aldolase-type TIM barrel VA249_20670 IPR003698 Lipoyl synthase VA249_20670 IPR031691 Lipoyl synthase, N-terminal VA249_20670 IPR007197 Radical SAM VA249_20680 IPR015424 Pyridoxal phosphate-dependent transferase VA249_20680 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 VA249_20680 IPR015421 Pyridoxal phosphate-dependent transferase, major domain VA249_20680 IPR001085 Serine hydroxymethyltransferase VA249_20680 IPR039429 Serine hydroxymethyltransferase-like domain VA249_20680 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site VA249_20690 IPR019264 Domain of unknown function DUF2179 VA249_20690 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal VA249_20690 IPR003740 Uncharacterised membrane protein YitT VA249_20700 IPR012769 Trehalose-6-phosphate hydrolase VA249_20700 IPR013780 Glycosyl hydrolase, all-beta VA249_20700 IPR017853 Glycoside hydrolase superfamily VA249_20700 IPR032091 Maltogenic Amylase, C-terminal VA249_20700 IPR006047 Glycosyl hydrolase, family 13, catalytic domain VA249_20710 IPR028082 Periplasmic binding protein-like I VA249_20710 IPR000843 LacI-type HTH domain VA249_20710 IPR010982 Lambda repressor-like, DNA-binding domain superfamily VA249_20710 IPR012771 Trehalose operon repressor VA249_20720 IPR006549 HAD-superfamily hydrolase,subfamily IIIA VA249_20720 IPR023214 HAD superfamily VA249_20720 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase VA249_20720 IPR006543 Histidinol-phosphate phosphatase VA249_20720 IPR036412 HAD-like superfamily VA249_20730 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_20730 IPR018449 NIL domain VA249_20730 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain VA249_20730 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal VA249_20730 IPR012692 ABC transporter, methionine import, ATP-binding protein MetN, proteobacteria VA249_20730 IPR026253 Methionine import ATP-binding protein MetN VA249_20730 IPR003593 AAA+ ATPase domain VA249_20730 IPR017871 ABC transporter, conserved site VA249_20730 IPR003439 ABC transporter-like VA249_20740 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VA249_20740 IPR035906 MetI-like superfamily VA249_20750 IPR004872 Lipoprotein NlpA family VA249_20760 IPR016908 Uncharacterised conserved protein UCP029037 VA249_20770 IPR038228 Syd superfamily VA249_20770 IPR009948 Syd VA249_20780 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 VA249_20780 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal VA249_20780 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF VA249_20800 IPR000160 GGDEF domain VA249_20800 IPR029787 Nucleotide cyclase VA249_20810 IPR021826 Domain of unknown function DUF3412 VA249_20810 IPR027820 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH, N-terminal VA249_20810 IPR031100 LOG family VA249_20810 IPR037153 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH-like superfamily VA249_20820 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal VA249_20820 IPR002421 5'-3' exonuclease, N-terminal VA249_20820 IPR036279 5'-3' exonuclease, C-terminal domain superfamily VA249_20820 IPR020045 DNA polymerase I-like, H3TH domain VA249_20820 IPR038969 Flap endonuclease VA249_20820 IPR008918 Helix-hairpin-helix motif, class 2 VA249_20820 IPR029060 PIN-like domain superfamily VA249_20820 IPR022895 Flap endonuclease Xni VA249_20830 IPR040739 RlmM ferredoxin-like domain VA249_20830 IPR002877 Ribosomal RNA methyltransferase FtsJ domain VA249_20830 IPR011224 Ribosomal RNA large subunit methyltransferase M VA249_20830 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VA249_20840 IPR006696 Protein of unknown function DUF423 VA249_20860 IPR000847 Transcription regulator HTH, LysR VA249_20860 IPR036390 Winged helix DNA-binding domain superfamily VA249_20860 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_20860 IPR005119 LysR, substrate-binding VA249_20880 IPR001763 Rhodanese-like domain VA249_20880 IPR036873 Rhodanese-like domain superfamily VA249_20880 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VA249_20880 IPR026340 Thiazole biosynthesis domain VA249_20880 IPR020536 Thil, AANH domain VA249_20880 IPR004114 THUMP domain VA249_20880 IPR003720 tRNA sulfurtransferase ThiI VA249_20890 IPR025713 Motility protein B, N-terminal domain VA249_20890 IPR036737 OmpA-like domain superfamily VA249_20890 IPR006665 OmpA-like domain VA249_20900 IPR000540 Flagellar motor protein MotA, conserved site VA249_20900 IPR002898 MotA/TolQ/ExbB proton channel VA249_20910 IPR037004 Exonuclease VII, small subunit superfamily VA249_20910 IPR003761 Exonuclease VII, small subunit VA249_20920 IPR008949 Isoprenoid synthase domain superfamily VA249_20920 IPR000092 Polyprenyl synthetase VA249_20920 IPR033749 Polyprenyl synthetase, conserved site VA249_20930 IPR005474 Transketolase, N-terminal VA249_20930 IPR005477 Deoxyxylulose-5-phosphate synthase VA249_20930 IPR029061 Thiamin diphosphate-binding fold VA249_20930 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II VA249_20930 IPR005475 Transketolase-like, pyrimidine-binding domain VA249_20930 IPR020826 Transketolase binding site VA249_20930 IPR033248 Transketolase, C-terminal domain VA249_20940 IPR007686 YutG/PgpA domain VA249_20940 IPR036681 PgpA-like superfamily VA249_20940 IPR026037 Phosphatidylglycerophosphatase A VA249_20950 IPR010918 PurM-like, C-terminal domain VA249_20950 IPR036676 PurM-like, C-terminal domain superfamily VA249_20950 IPR016188 PurM-like, N-terminal domain VA249_20950 IPR036921 PurM-like, N-terminal domain superfamily VA249_20950 IPR006283 Thiamine-monophosphate kinase VA249_20960 IPR011605 NusB antitermination factor VA249_20960 IPR035926 NusB-like superfamily VA249_20960 IPR006027 NusB/RsmB/TIM44 VA249_20970 IPR034964 Lumazine synthase VA249_20970 IPR002180 Lumazine/riboflavin synthase VA249_20970 IPR036467 Lumazine/riboflavin synthase superfamily VA249_20980 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily VA249_20980 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB VA249_20980 IPR032677 GTP cyclohydrolase II VA249_20980 IPR036144 RibA-like superfamily VA249_20990 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily VA249_20990 IPR001783 Lumazine-binding protein VA249_20990 IPR026017 Lumazine-binding domain VA249_20990 IPR017938 Riboflavin synthase-like beta-barrel VA249_21000 IPR004794 Riboflavin biosynthesis protein RibD VA249_21000 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal VA249_21000 IPR011549 Riboflavin-specific deaminase, C-terminal VA249_21000 IPR024072 Dihydrofolate reductase-like domain superfamily VA249_21000 IPR016193 Cytidine deaminase-like VA249_21000 IPR002125 Cytidine and deoxycytidylate deaminase domain VA249_21000 IPR016192 APOBEC/CMP deaminase, zinc-binding VA249_21010 IPR005144 ATP-cone domain VA249_21010 IPR003796 Ribonucleotide reductase regulator NrdR-like VA249_21020 IPR016163 Aldehyde dehydrogenase, C-terminal VA249_21020 IPR016162 Aldehyde dehydrogenase, N-terminal VA249_21020 IPR015590 Aldehyde dehydrogenase domain VA249_21020 IPR000965 GPR domain VA249_21020 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site VA249_21020 IPR012134 Glutamate-5-semialdehyde dehydrogenase VA249_21020 IPR016161 Aldehyde/histidinol dehydrogenase VA249_21030 IPR002478 PUA domain VA249_21030 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase VA249_21030 IPR019797 Glutamate 5-kinase, conserved site VA249_21030 IPR015947 PUA-like superfamily VA249_21030 IPR036974 PUA domain superfamily VA249_21030 IPR011529 Glutamate 5-kinase VA249_21030 IPR001057 Glutamate/acetylglutamate kinase VA249_21030 IPR041739 Glutamate-5-kinase domain VA249_21030 IPR036393 Acetylglutamate kinase-like superfamily VA249_21030 IPR001048 Aspartate/glutamate/uridylate kinase VA249_21040 IPR038208 Sigma factor-binding protein Crl superfamily VA249_21040 IPR009986 Sigma factor-binding transcriptional regulator Crl VA249_21050 IPR029058 Alpha/Beta hydrolase fold VA249_21050 IPR010520 UPF0255 family VA249_21060 IPR023747 Xanthine-guanine phosphoribosyltransferase VA249_21060 IPR000836 Phosphoribosyltransferase domain VA249_21060 IPR029057 Phosphoribosyltransferase-like VA249_21070 IPR026033 Azaguanine-like transporters VA249_21070 IPR006043 Xanthine/uracil/vitamin C permease VA249_21080 IPR011650 Peptidase M20, dimerisation domain VA249_21080 IPR001160 Peptidase M20C, Xaa-His dipeptidase VA249_21080 IPR002933 Peptidase M20 VA249_21120 IPR029062 Class I glutamine amidotransferase-like VA249_21120 IPR040707 Phosphoribosylformylglycinamidine synthase, N-terminal VA249_21120 IPR017926 Glutamine amidotransferase VA249_21120 IPR010073 Phosphoribosylformylglycinamidine synthase PurL VA249_21120 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily VA249_21120 IPR036921 PurM-like, N-terminal domain superfamily VA249_21120 IPR036676 PurM-like, C-terminal domain superfamily VA249_21120 IPR010918 PurM-like, C-terminal domain VA249_21120 IPR041609 Phosphoribosylformylglycinamidine synthase, linker domain VA249_21130 IPR000189 Prokaryotic transglycosylase, active site VA249_21130 IPR008258 Transglycosylase SLT domain 1 VA249_21130 IPR023346 Lysozyme-like domain superfamily VA249_21130 IPR023703 Membrane-bound lytic murein transglycosylase F VA249_21130 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VA249_21150 IPR016193 Cytidine deaminase-like VA249_21150 IPR028883 tRNA-specific adenosine deaminase VA249_21150 IPR016192 APOBEC/CMP deaminase, zinc-binding VA249_21150 IPR002125 Cytidine and deoxycytidylate deaminase domain VA249_21160 IPR004697 p-Aminobenzoyl-glutamate transport protein AbgT VA249_21160 IPR011540 AbgT, Proteobacteria VA249_21200 IPR001082 Fimbrial protein pilin VA249_21200 IPR012902 Prokaryotic N-terminal methylation site VA249_21200 IPR000983 Bacterial general secretion pathway protein G-type pilin VA249_21210 IPR012724 Chaperone DnaJ VA249_21210 IPR002939 Chaperone DnaJ, C-terminal VA249_21210 IPR001623 DnaJ domain VA249_21210 IPR018253 DnaJ domain, conserved site VA249_21210 IPR008971 HSP40/DnaJ peptide-binding VA249_21210 IPR001305 Heat shock protein DnaJ, cysteine-rich domain VA249_21210 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily VA249_21210 IPR036869 Chaperone J-domain superfamily VA249_21220 IPR012725 Chaperone DnaK VA249_21220 IPR018181 Heat shock protein 70, conserved site VA249_21220 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily VA249_21220 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily VA249_21220 IPR013126 Heat shock protein 70 family VA249_21230 IPR036458 Sodium:dicarboxylate symporter superfamily VA249_21230 IPR001991 Sodium:dicarboxylate symporter VA249_21230 IPR018107 Sodium:dicarboxylate symporter, conserved site VA249_21230 IPR023954 C4-dicarboxylate transport protein VA249_21240 IPR009012 GrpE nucleotide exchange factor, head VA249_21240 IPR000740 GrpE nucleotide exchange factor VA249_21240 IPR013805 GrpE nucleotide exchange factor, coiled-coil VA249_21250 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal VA249_21250 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal VA249_21250 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily VA249_21250 IPR002504 NAD kinase VA249_21260 IPR004604 DNA recombination/repair protein RecN VA249_21260 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_21260 IPR003395 RecF/RecN/SMC, N-terminal VA249_21270 IPR026592 Outer membrane protein assembly factor BamE VA249_21270 IPR037873 BamE-like VA249_21270 IPR007450 Lipoprotein SmpA/OmlA VA249_21280 IPR005346 RnfH protein VA249_21280 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp VA249_21280 IPR037021 RnfH superfamily VA249_21290 IPR023393 START-like domain superfamily VA249_21290 IPR005031 Coenzyme Q-binding protein COQ10, START domain VA249_21300 IPR023620 Small protein B VA249_21300 IPR000037 SsrA-binding protein VA249_21300 IPR020081 SsrA-binding protein, conserved site VA249_21310 IPR025166 Integrase, DNA-binding domain VA249_21310 IPR010998 Integrase/recombinase, N-terminal VA249_21310 IPR013762 Integrase-like, catalytic domain superfamily VA249_21310 IPR011010 DNA breaking-rejoining enzyme, catalytic core VA249_21310 IPR038488 Integrase, DNA-binding domain superfamily VA249_21310 IPR002104 Integrase, catalytic domain VA249_21340 IPR014001 Helicase superfamily 1/2, ATP-binding domain VA249_21340 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_21340 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal VA249_21340 IPR004473 Restriction endonuclease, type I, HsdR VA249_21340 IPR040980 SWI2/SNF2 ATPase VA249_21340 IPR022625 Type-1 restriction enzyme R protein, C-terminal VA249_21360 IPR004546 Restriction endonuclease, type I, HsdM VA249_21360 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain VA249_21360 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily VA249_21360 IPR003356 DNA methylase, adenine-specific VA249_21360 IPR002052 DNA methylase, N-6 adenine-specific, conserved site VA249_21360 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VA249_21420 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VA249_21420 IPR002052 DNA methylase, N-6 adenine-specific, conserved site VA249_21420 IPR003356 DNA methylase, adenine-specific VA249_21420 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily VA249_21420 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain VA249_21440 IPR040980 SWI2/SNF2 ATPase VA249_21440 IPR004473 Restriction endonuclease, type I, HsdR VA249_21440 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal VA249_21440 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_21440 IPR014001 Helicase superfamily 1/2, ATP-binding domain VA249_21440 IPR021810 Protein of unknown function DUF3387 VA249_21470 IPR004546 Restriction endonuclease, type I, HsdM VA249_21470 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain VA249_21470 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily VA249_21470 IPR003356 DNA methylase, adenine-specific VA249_21470 IPR002052 DNA methylase, N-6 adenine-specific, conserved site VA249_21470 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VA249_21560 IPR018117 DNA methylase, C-5 cytosine-specific, active site VA249_21560 IPR001525 C-5 cytosine methyltransferase VA249_21560 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VA249_21610 IPR005814 Aminotransferase class-III VA249_21610 IPR015424 Pyridoxal phosphate-dependent transferase VA249_21610 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 VA249_21610 IPR015421 Pyridoxal phosphate-dependent transferase, major domain VA249_21620 IPR015421 Pyridoxal phosphate-dependent transferase, major domain VA249_21620 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 VA249_21620 IPR015424 Pyridoxal phosphate-dependent transferase VA249_21620 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase VA249_21620 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme VA249_21630 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 VA249_21630 IPR015421 Pyridoxal phosphate-dependent transferase, major domain VA249_21630 IPR015424 Pyridoxal phosphate-dependent transferase VA249_21630 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme VA249_21630 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase VA249_21640 IPR037411 HTH-type transcriptional regulator AlsR, PBP2 domain VA249_21640 IPR036390 Winged helix DNA-binding domain superfamily VA249_21640 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_21640 IPR000847 Transcription regulator HTH, LysR VA249_21640 IPR005119 LysR, substrate-binding VA249_21650 IPR036188 FAD/NAD(P)-binding domain superfamily VA249_21650 IPR023080 D-amino acid dehydrogenase DadA VA249_21650 IPR006076 FAD dependent oxidoreductase VA249_21670 IPR001463 Sodium:alanine symporter VA249_21680 IPR000791 Acetate transporter GPR1/FUN34/SatP family VA249_21690 IPR029062 Class I glutamine amidotransferase-like VA249_21690 IPR017926 Glutamine amidotransferase VA249_21690 IPR001674 GMP synthase, C-terminal VA249_21690 IPR022310 NAD/GMP synthase VA249_21690 IPR025777 GMP synthetase ATP pyrophosphatase domain VA249_21690 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VA249_21690 IPR022955 GMP synthase VA249_21690 IPR004739 GMP synthase, glutamine amidotransferase VA249_21700 IPR000644 CBS domain VA249_21700 IPR005990 Inosine-5'-monophosphate dehydrogenase VA249_21700 IPR015875 IMP dehydrogenase / GMP reductase, conserved site VA249_21700 IPR001093 IMP dehydrogenase/GMP reductase VA249_21700 IPR013785 Aldolase-type TIM barrel VA249_21710 IPR003753 Exonuclease VII, large subunit VA249_21710 IPR025824 OB-fold nucleic acid binding domain VA249_21710 IPR020579 Exonuclease VII, large subunit, C-terminal VA249_21740 IPR031166 EngA-type guanine nucleotide-binding (G) domain VA249_21740 IPR016484 GTP-binding protein EngA VA249_21740 IPR005225 Small GTP-binding protein domain VA249_21740 IPR003593 AAA+ ATPase domain VA249_21740 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_21740 IPR015946 K homology domain-like, alpha/beta VA249_21740 IPR006073 GTP binding domain VA249_21740 IPR032859 GTPase Der, C-terminal KH-domain-like VA249_21750 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat VA249_21750 IPR002372 Pyrrolo-quinoline quinone repeat VA249_21750 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily VA249_21750 IPR015943 WD40/YVTN repeat-like-containing domain superfamily VA249_21750 IPR017687 Outer membrane protein assembly factor BamB VA249_21760 IPR011990 Tetratricopeptide-like helical domain superfamily VA249_21760 IPR018704 Tetratricopeptide repeat-like domain VA249_21760 IPR026039 Uncharacterised protein family UPF0070 VA249_21770 IPR006195 Aminoacyl-tRNA synthetase, class II VA249_21770 IPR036621 Anticodon-binding domain superfamily VA249_21770 IPR015807 Histidine-tRNA ligase VA249_21770 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain VA249_21770 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit VA249_21770 IPR033656 Histidyl-anticodon-binding VA249_21770 IPR004154 Anticodon-binding VA249_21780 IPR011005 Dihydropteroate synthase-like VA249_21780 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial VA249_21780 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type VA249_21790 IPR023690 Cytoskeleton protein RodZ VA249_21790 IPR001387 Cro/C1-type helix-turn-helix domain VA249_21790 IPR025194 Domain of unknown function DUF4115 VA249_21790 IPR010982 Lambda repressor-like, DNA-binding domain superfamily VA249_21800 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr VA249_21800 IPR040072 Methyltransferase (Class A) VA249_21800 IPR027492 Dual-specificity RNA methyltransferase RlmN VA249_21800 IPR007197 Radical SAM VA249_21800 IPR013785 Aldolase-type TIM barrel VA249_21810 IPR036850 Nucleoside diphosphate kinase-like domain superfamily VA249_21810 IPR001564 Nucleoside diphosphate kinase VA249_21810 IPR034907 Nucleoside diphosphate kinase-like domain VA249_21810 IPR023005 Nucleoside diphosphate kinase, active site VA249_21820 IPR001346 Interferon regulatory factor DNA-binding domain VA249_21820 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B VA249_21820 IPR008330 Peptidase M17, peptidase B VA249_21820 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal VA249_21830 IPR007479 ISC system FeS cluster assembly, IscX VA249_21830 IPR036762 IscX-like superfamily VA249_21840 IPR018298 Adrenodoxin, iron-sulphur binding site VA249_21840 IPR036010 2Fe-2S ferredoxin-like superfamily VA249_21840 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain VA249_21840 IPR001055 Adrenodoxin VA249_21840 IPR012675 Beta-grasp domain superfamily VA249_21840 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria VA249_21850 IPR010236 ISC system FeS cluster assembly, HscA chaperone VA249_21850 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily VA249_21850 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily VA249_21850 IPR018181 Heat shock protein 70, conserved site VA249_21850 IPR013126 Heat shock protein 70 family VA249_21850 IPR042039 HscA chaperone, nucleotide-binding domain VA249_21860 IPR036869 Chaperone J-domain superfamily VA249_21860 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain VA249_21860 IPR036386 HscB, C-terminal domain superfamily VA249_21860 IPR004640 Co-chaperone Hsc20 VA249_21860 IPR001623 DnaJ domain VA249_21870 IPR011302 Iron-binding protein IscA, proteobacteria VA249_21870 IPR000361 FeS cluster biogenesis VA249_21870 IPR016092 FeS cluster insertion protein VA249_21870 IPR017870 FeS cluster insertion, C-terminal, conserved site VA249_21870 IPR035903 HesB-like domain superfamily VA249_21880 IPR011339 ISC system FeS cluster assembly, IscU scaffold VA249_21880 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal VA249_21890 IPR000192 Aminotransferase class V domain VA249_21890 IPR010240 Cysteine desulfurase IscS VA249_21890 IPR016454 Cysteine desulfurase VA249_21890 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 VA249_21890 IPR015421 Pyridoxal phosphate-dependent transferase, major domain VA249_21890 IPR015424 Pyridoxal phosphate-dependent transferase VA249_21890 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site VA249_21900 IPR010242 Transcription factor HTH, IscR VA249_21900 IPR030489 Transcription regulator Rrf2-type, conserved site VA249_21900 IPR000944 Transcription regulator Rrf2-type VA249_21900 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_21900 IPR036390 Winged helix DNA-binding domain superfamily VA249_21910 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VA249_21910 IPR029028 Alpha/beta knot methyltransferases VA249_21910 IPR004384 RNA methyltransferase TrmJ/LasT VA249_21910 IPR001537 tRNA/rRNA methyltransferase, SpoU type VA249_21920 IPR033942 Inositol monophosphatase VA249_21920 IPR020583 Inositol monophosphatase, metal-binding site VA249_21920 IPR000760 Inositol monophosphatase-like VA249_21920 IPR020550 Inositol monophosphatase, conserved site VA249_21920 IPR022337 Inositol monophosphatase, SuhB VA249_21930 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial VA249_21930 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VA249_21930 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site VA249_21930 IPR005665 Protein-export membrane protein SecF, bacterial VA249_21940 IPR005791 Protein translocase subunit SecD VA249_21940 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site VA249_21940 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VA249_21940 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial VA249_21940 IPR001036 Acriflavin resistance protein VA249_21940 IPR027398 SecD export protein N-terminal TM domain VA249_21950 IPR003849 Preprotein translocase YajC VA249_21960 IPR004803 tRNA-guanine transglycosylase VA249_21960 IPR036511 Queuine tRNA-ribosyltransferase-like VA249_21960 IPR002616 tRNA-guanine(15) transglycosylase-like VA249_21970 IPR042119 QueA, domain 2 VA249_21970 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA VA249_21970 IPR042118 QueA, domain 1 VA249_21970 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily VA249_21990 IPR000644 CBS domain VA249_22000 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site VA249_22000 IPR006254 Isocitrate lyase VA249_22000 IPR039556 ICL/PEPM domain VA249_22000 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily VA249_22000 IPR040442 Pyruvate kinase-like domain superfamily VA249_22010 IPR011076 Malate synthase-like superfamily VA249_22010 IPR006252 Malate synthase A VA249_22010 IPR001465 Malate synthase VA249_22010 IPR019830 Malate synthase, conserved site VA249_22020 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_22020 IPR005119 LysR, substrate-binding VA249_22020 IPR000847 Transcription regulator HTH, LysR VA249_22020 IPR036390 Winged helix DNA-binding domain superfamily VA249_22030 IPR013766 Thioredoxin domain VA249_22030 IPR036249 Thioredoxin-like superfamily VA249_22030 IPR019479 Peroxiredoxin, C-terminal VA249_22030 IPR024706 Peroxiredoxin, AhpC-type VA249_22030 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant VA249_22040 IPR023648 Copper homeostasis CutC domain VA249_22040 IPR005627 Copper homeostasis protein CutC VA249_22040 IPR036822 Copper homeostasis (CutC) domain superfamily VA249_22050 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_22050 IPR022486 Polyphosphate kinase 2, PA0141 VA249_22050 IPR022488 Polyphosphate kinase-2-related VA249_22050 IPR016898 Polyphosphate kinase 2 VA249_22060 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_22060 IPR000847 Transcription regulator HTH, LysR VA249_22060 IPR005119 LysR, substrate-binding VA249_22060 IPR036390 Winged helix DNA-binding domain superfamily VA249_22080 IPR028366 Phosphate transport system protein PhoU VA249_22080 IPR038078 PhoU-like domain superfamily VA249_22080 IPR026022 PhoU domain VA249_22090 IPR005670 Phosphate transport system permease protein 1 VA249_22090 IPR003593 AAA+ ATPase domain VA249_22090 IPR003439 ABC transporter-like VA249_22090 IPR017871 ABC transporter, conserved site VA249_22090 IPR015850 ABC transporter, phosphate import, PstB VA249_22090 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_22100 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VA249_22100 IPR005672 Phosphate transport system permease protein PstA VA249_22100 IPR035906 MetI-like superfamily VA249_22110 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VA249_22110 IPR035906 MetI-like superfamily VA249_22110 IPR011864 Phosphate ABC transporter, permease protein PstC VA249_22120 IPR025200 Polyphosphate kinase C-terminal domain 2 VA249_22120 IPR025198 Polyphosphate kinase N-terminal domain VA249_22120 IPR001736 Phospholipase D/Transphosphatidylase VA249_22120 IPR003414 Polyphosphate kinase VA249_22120 IPR041108 Polyphosphate kinase, C-terminal domain 1 VA249_22120 IPR036832 Polyphosphate kinase N-terminal domain superfamily VA249_22120 IPR036830 Polyphosphate kinase middle domain superfamily VA249_22120 IPR024953 Polyphosphate kinase middle domain VA249_22130 IPR030673 Pyrophosphatase, GppA/Ppx-type VA249_22130 IPR003695 Ppx/GppA phosphatase VA249_22130 IPR022371 Exopolyphosphatase VA249_22140 IPR011862 Phosphate binding protein VA249_22140 IPR024370 PBP domain VA249_22150 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VA249_22150 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain VA249_22150 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily VA249_22150 IPR000014 PAS domain VA249_22150 IPR035965 PAS domain superfamily VA249_22150 IPR013767 PAS fold VA249_22150 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VA249_22150 IPR003594 Histidine kinase/HSP90-like ATPase VA249_22150 IPR021766 Phosphate regulon sensor protein PhoR VA249_22150 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR VA249_22150 IPR005467 Histidine kinase domain VA249_22160 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB VA249_22160 IPR001867 OmpR/PhoB-type DNA-binding domain VA249_22160 IPR011006 CheY-like superfamily VA249_22160 IPR039420 Transcriptional regulatory protein WalR-like VA249_22160 IPR001789 Signal transduction response regulator, receiver domain VA249_22160 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_22170 IPR007476 Putative exonuclease, RdgC VA249_22180 IPR032525 Peptidase family U32, C-terminal VA249_22180 IPR001539 Peptidase U32 VA249_22190 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VA249_22190 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VA249_22210 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily VA249_22210 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase VA249_22230 IPR001270 ClpA/B family VA249_22230 IPR041546 ClpA/ClpB, AAA lid domain VA249_22230 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_22230 IPR004176 Clp, N-terminal VA249_22230 IPR003593 AAA+ ATPase domain VA249_22230 IPR019489 Clp ATPase, C-terminal VA249_22230 IPR017730 Chaperonin ClpB VA249_22230 IPR003959 ATPase, AAA-type, core VA249_22230 IPR028299 ClpA/B, conserved site 2 VA249_22230 IPR036628 Clp, N-terminal domain superfamily VA249_22230 IPR018368 ClpA/B, conserved site 1 VA249_22240 IPR011324 Cytotoxic necrotizing factor-like, catalytic VA249_22240 IPR038371 Multi-copper polyphenol oxidoreductase superfamily VA249_22240 IPR003730 Multi-copper polyphenol oxidoreductase VA249_22250 IPR020103 Pseudouridine synthase, catalytic domain superfamily VA249_22250 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site VA249_22250 IPR006145 Pseudouridine synthase, RsuA/RluA VA249_22250 IPR002942 RNA-binding S4 domain VA249_22250 IPR036986 RNA-binding S4 domain superfamily VA249_22250 IPR006225 Pseudouridine synthase, RluC/RluD VA249_22260 IPR039565 Outer membrane lipoprotein BamD-like VA249_22260 IPR011990 Tetratricopeptide-like helical domain superfamily VA249_22260 IPR017689 Outer membrane protein assembly factor BamD VA249_22270 IPR023346 Lysozyme-like domain superfamily VA249_22270 IPR000189 Prokaryotic transglycosylase, active site VA249_22270 IPR008258 Transglycosylase SLT domain 1 VA249_22280 IPR036567 Ribosome hibernation promotion factor-like VA249_22280 IPR003489 Ribosome hibernation promoting factor/RaiA VA249_22290 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase VA249_22290 IPR002912 ACT domain VA249_22290 IPR036263 Chorismate mutase type II superfamily VA249_22290 IPR010952 Chorismate mutase, gammaproteobacteria VA249_22290 IPR002701 Chorismate mutase II, prokaryotic-type VA249_22290 IPR001086 Prephenate dehydratase VA249_22290 IPR018528 Prephenate dehydratase, conserved site VA249_22290 IPR036979 Chorismate mutase domain superfamily VA249_22300 IPR029001 Inosine triphosphate pyrophosphatase-like VA249_22300 IPR002786 Inosine/xanthosine triphosphatase VA249_22300 IPR026533 Non-canonical purine NTP phosphatase/PRRC1 VA249_22310 IPR000831 Trp repressor VA249_22310 IPR013335 Trp repressor, bacterial VA249_22310 IPR010921 Trp repressor/replication initiator VA249_22310 IPR038116 TrpR-like superfamily VA249_22320 IPR008939 Lytic transglycosylase, superhelical U-shaped VA249_22320 IPR023346 Lysozyme-like domain superfamily VA249_22320 IPR037061 Lytic transglycosylase, superhelical linker domain superfamily VA249_22320 IPR012289 Lytic transglycosylase, superhelical linker VA249_22320 IPR000189 Prokaryotic transglycosylase, active site VA249_22320 IPR008258 Transglycosylase SLT domain 1 VA249_22330 IPR017871 ABC transporter, conserved site VA249_22330 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_22330 IPR022374 Energy-dependent translational throttle protein EttA VA249_22330 IPR003439 ABC transporter-like VA249_22330 IPR032781 ABC-transporter extension domain VA249_22330 IPR003593 AAA+ ATPase domain VA249_22340 IPR027021 Cyclic di-GMP binding protein, PA4608 type VA249_22340 IPR009875 PilZ domain VA249_22350 IPR011055 Duplicated hybrid motif VA249_22350 IPR007340 Opacity-associated protein A VA249_22350 IPR016047 Peptidase M23 VA249_22360 IPR003099 Prephenate dehydrogenase VA249_22360 IPR011277 Chorismate mutase, T-protein VA249_22360 IPR036291 NAD(P)-binding domain superfamily VA249_22360 IPR002701 Chorismate mutase II, prokaryotic-type VA249_22360 IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein VA249_22360 IPR036263 Chorismate mutase type II superfamily VA249_22360 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily VA249_22360 IPR036979 Chorismate mutase domain superfamily VA249_22370 IPR013785 Aldolase-type TIM barrel VA249_22370 IPR006218 DAHP synthetase I/KDSA VA249_22370 IPR006219 DHAP synthase, class 1 VA249_22380 IPR017853 Glycoside hydrolase superfamily VA249_22380 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily VA249_22380 IPR001764 Glycoside hydrolase, family 3, N-terminal VA249_22380 IPR019800 Glycoside hydrolase, family 3, active site VA249_22380 IPR022956 Beta-hexosaminidase, bacterial VA249_22390 IPR005338 Anhydro-N-acetylmuramic acid kinase VA249_22400 IPR040190 N-acetylmuramic acid 6-phosphate etherase/glucokinase regulatory protein VA249_22400 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ VA249_22400 IPR005486 Glucokinase regulatory protein, conserved site VA249_22400 IPR001347 Sugar isomerase (SIS) VA249_22430 IPR003706 CstA, N-terminal domain VA249_22440 IPR003018 GAF domain VA249_22440 IPR010559 Signal transduction histidine kinase, internal region VA249_22440 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region VA249_22440 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VA249_22450 IPR003018 GAF domain VA249_22450 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VA249_22450 IPR010559 Signal transduction histidine kinase, internal region VA249_22450 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region VA249_22460 IPR011006 CheY-like superfamily VA249_22460 IPR001789 Signal transduction response regulator, receiver domain VA249_22460 IPR007492 LytTR DNA-binding domain VA249_22470 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase VA249_22480 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain VA249_22490 IPR001872 Peptidase A8, signal peptidase II VA249_22500 IPR023585 Isoleucine-tRNA ligase, type 1 VA249_22500 IPR002301 Isoleucine-tRNA ligase VA249_22500 IPR033708 Isoleucyl tRNA synthetase type 1, anticodon-binding domain VA249_22500 IPR002300 Aminoacyl-tRNA synthetase, class Ia VA249_22500 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site VA249_22500 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding VA249_22500 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain VA249_22500 IPR010663 Zinc finger, FPG/IleRS-type VA249_22500 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VA249_22500 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding VA249_22510 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VA249_22510 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic VA249_22510 IPR015864 FAD synthetase VA249_22510 IPR023468 Riboflavin kinase VA249_22510 IPR002606 Riboflavin kinase, bacterial VA249_22510 IPR023465 Riboflavin kinase domain superfamily VA249_22520 IPR004268 Peptidoglycan biosynthesis protein MurJ VA249_22530 IPR002583 Ribosomal protein S20 VA249_22530 IPR036510 Ribosomal protein S20 superfamily VA249_22540 IPR001845 HTH ArsR-type DNA-binding domain VA249_22540 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_22540 IPR036390 Winged helix DNA-binding domain superfamily VA249_22540 IPR011991 ArsR-like helix-turn-helix domain VA249_22550 IPR000847 Transcription regulator HTH, LysR VA249_22550 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_22550 IPR036390 Winged helix DNA-binding domain superfamily VA249_22550 IPR005119 LysR, substrate-binding VA249_22570 IPR003841 Sodium-dependent phosphate transport protein VA249_22570 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein VA249_22580 IPR020940 Thymidylate synthase, active site VA249_22580 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain VA249_22580 IPR000398 Thymidylate synthase VA249_22580 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily VA249_22590 IPR001640 Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase Lgt VA249_22600 IPR002781 Transmembrane protein TauE-like VA249_22610 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily VA249_22610 IPR003018 GAF domain VA249_22610 IPR029016 GAF-like domain superfamily VA249_22610 IPR040442 Pyruvate kinase-like domain superfamily VA249_22610 IPR000121 PEP-utilising enzyme, C-terminal VA249_22610 IPR008279 PEP-utilising enzyme, mobile domain VA249_22610 IPR036637 Phosphohistidine domain superfamily VA249_22610 IPR006318 Phosphotransferase system, enzyme I-like VA249_22610 IPR008731 Phosphotransferase system, enzyme I N-terminal VA249_22610 IPR036618 PtsI, HPr-binding domain superfamily VA249_22610 IPR023151 PEP-utilising enzyme, conserved site VA249_22610 IPR018274 PEP-utilising enzyme, active site VA249_22620 IPR015797 NUDIX hydrolase-like domain superfamily VA249_22620 IPR020476 NUDIX hydrolase VA249_22620 IPR020084 NUDIX hydrolase, conserved site VA249_22620 IPR000086 NUDIX hydrolase domain VA249_22620 IPR022927 RNA pyrophosphohydrolase RppH VA249_22630 IPR037057 DNA mismatch repair MutH/Restriction endonuclease, type II superfamily VA249_22630 IPR011335 Restriction endonuclease type II-like VA249_22630 IPR004230 DNA mismatch repair protein MutH VA249_22630 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II VA249_22650 IPR023210 NADP-dependent oxidoreductase domain VA249_22650 IPR036812 NADP-dependent oxidoreductase domain superfamily VA249_22650 IPR020471 Aldo/keto reductase VA249_22670 IPR003593 AAA+ ATPase domain VA249_22670 IPR025944 Sigma-54 interaction domain, conserved site VA249_22670 IPR011006 CheY-like superfamily VA249_22670 IPR009057 Homeobox-like domain superfamily VA249_22670 IPR002197 DNA binding HTH domain, Fis-type VA249_22670 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_22670 IPR001789 Signal transduction response regulator, receiver domain VA249_22670 IPR002078 RNA polymerase sigma factor 54 interaction domain VA249_22670 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VA249_22670 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VA249_22680 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type VA249_22680 IPR012340 Nucleic acid-binding, OB-fold VA249_22680 IPR002313 Lysine-tRNA ligase, class II VA249_22680 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal VA249_22680 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) VA249_22680 IPR006195 Aminoacyl-tRNA synthetase, class II VA249_22690 IPR004374 Peptide chain release factor 2 VA249_22690 IPR005139 Peptide chain release factor VA249_22690 IPR000352 Peptide chain release factor class I VA249_22700 IPR003156 DHHA1 domain VA249_22700 IPR038763 DHH phosphoesterase superfamily VA249_22700 IPR004610 Bacterial RecJ exonuclease VA249_22700 IPR041122 RecJ, OB domain VA249_22700 IPR001667 DDH domain VA249_22710 IPR041122 RecJ, OB domain VA249_22710 IPR004610 Bacterial RecJ exonuclease VA249_22710 IPR003156 DHHA1 domain VA249_22710 IPR038763 DHH phosphoesterase superfamily VA249_22710 IPR001667 DDH domain VA249_22720 IPR013766 Thioredoxin domain VA249_22720 IPR033954 Disulphide bond isomerase, DsbC/G VA249_22720 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal VA249_22720 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily VA249_22720 IPR012336 Thioredoxin-like fold VA249_22720 IPR017937 Thioredoxin, conserved site VA249_22720 IPR036249 Thioredoxin-like superfamily VA249_22730 IPR011010 DNA breaking-rejoining enzyme, catalytic core VA249_22730 IPR013762 Integrase-like, catalytic domain superfamily VA249_22730 IPR002104 Integrase, catalytic domain VA249_22730 IPR010998 Integrase/recombinase, N-terminal VA249_22730 IPR004107 Integrase, SAM-like, N-terminal VA249_22730 IPR011932 Tyrosine recombinase XerD VA249_22730 IPR023009 Tyrosine recombinase XerC/XerD VA249_22740 IPR001226 Flavodoxin, conserved site VA249_22740 IPR029039 Flavoprotein-like superfamily VA249_22740 IPR008254 Flavodoxin/nitric oxide synthase VA249_22740 IPR010086 Flavodoxin, long chain VA249_22750 IPR004685 Branched-chain amino acid transport system II carrier protein VA249_22760 IPR002052 DNA methylase, N-6 adenine-specific, conserved site VA249_22760 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VA249_22760 IPR007848 Methyltransferase small domain VA249_22760 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase VA249_22770 IPR011545 DEAD/DEAH box helicase domain VA249_22770 IPR014014 RNA helicase, DEAD-box type, Q motif VA249_22770 IPR028621 ATP-dependent RNA helicase SrmB VA249_22770 IPR014001 Helicase superfamily 1/2, ATP-binding domain VA249_22770 IPR001650 Helicase, C-terminal VA249_22770 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_22770 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VA249_22780 IPR005583 Peroxide stress protein YaaA VA249_22790 IPR023650 Beta-lactamase, class-A active site VA249_22790 IPR000871 Beta-lactamase, class-A VA249_22790 IPR012338 Beta-lactamase/transpeptidase-like VA249_22840 IPR001463 Sodium:alanine symporter VA249_22870 IPR002043 Uracil-DNA glycosylase family 1 VA249_22870 IPR018085 Uracil-DNA glycosylase, active site VA249_22870 IPR005122 Uracil-DNA glycosylase-like VA249_22870 IPR036895 Uracil-DNA glycosylase-like domain superfamily VA249_22880 IPR036237 Xylose isomerase-like superfamily VA249_22880 IPR013022 Xylose isomerase-like, TIM barrel domain VA249_22880 IPR001719 AP endonuclease 2 VA249_22880 IPR018246 AP endonuclease 2, zinc binding site VA249_22890 IPR019777 Formate C-acetyltransferase glycine radical, conserved site VA249_22890 IPR001150 Glycine radical domain VA249_22890 IPR011140 Autonomous glycyl radical cofactor GrcA VA249_22900 IPR004450 Threonine synthase-like VA249_22900 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme VA249_22900 IPR001926 Pyridoxal-phosphate dependent enzyme VA249_22900 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site VA249_22900 IPR029144 Threonine synthase, N-terminal VA249_22900 IPR037158 Threonine synthase, N-terminal domain superfamily VA249_22910 IPR000870 Homoserine kinase VA249_22910 IPR006203 GHMP kinase, ATP-binding, conserved site VA249_22910 IPR006204 GHMP kinase N-terminal domain VA249_22910 IPR036554 GHMP kinase, C-terminal domain superfamily VA249_22910 IPR013750 GHMP kinase, C-terminal domain VA249_22910 IPR020568 Ribosomal protein S5 domain 2-type fold VA249_22910 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VA249_22920 IPR036393 Acetylglutamate kinase-like superfamily VA249_22920 IPR002912 ACT domain VA249_22920 IPR041743 Bifunctional aspartokinase/homoserine dehydrogenase, N-terminal catalytic domain VA249_22920 IPR001048 Aspartate/glutamate/uridylate kinase VA249_22920 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding VA249_22920 IPR001341 Aspartate kinase VA249_22920 IPR018042 Aspartate kinase, conserved site VA249_22920 IPR027795 CASTOR, ACT domain VA249_22920 IPR001342 Homoserine dehydrogenase, catalytic VA249_22920 IPR019811 Homoserine dehydrogenase, conserved site VA249_22920 IPR036291 NAD(P)-binding domain superfamily VA249_22920 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I VA249_22940 IPR010203 Regulator of ribonuclease activity A VA249_22940 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein VA249_22940 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily VA249_22960 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_22960 IPR011006 CheY-like superfamily VA249_22960 IPR001867 OmpR/PhoB-type DNA-binding domain VA249_22960 IPR016032 Signal transduction response regulator, C-terminal effector VA249_22960 IPR001789 Signal transduction response regulator, receiver domain VA249_22960 IPR039420 Transcriptional regulatory protein WalR-like VA249_22980 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain superfamily VA249_22980 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VA249_22980 IPR000700 PAS-associated, C-terminal VA249_22980 IPR035965 PAS domain superfamily VA249_22980 IPR013767 PAS fold VA249_22980 IPR036641 HPT domain superfamily VA249_22980 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain VA249_22980 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB VA249_22980 IPR001789 Signal transduction response regulator, receiver domain VA249_22980 IPR003594 Histidine kinase/HSP90-like ATPase VA249_22980 IPR011006 CheY-like superfamily VA249_22980 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VA249_22980 IPR005467 Histidine kinase domain VA249_22980 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain VA249_22980 IPR000014 PAS domain VA249_22980 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily VA249_22980 IPR040642 Histidine kinase receptor ArcB, transmembrane domain VA249_22990 IPR023404 Radical SAM, alpha/beta horseshoe VA249_22990 IPR006638 Elp3/MiaB/NifB VA249_22990 IPR039661 ELP3/YhcC VA249_22990 IPR005911 Protein YhcC-like VA249_22990 IPR007197 Radical SAM VA249_22990 IPR032432 Radical SAM, C-terminal extension VA249_23000 IPR013785 Aldolase-type TIM barrel VA249_23000 IPR029055 Nucleophile aminohydrolases, N-terminal VA249_23000 IPR002932 Glutamate synthase domain VA249_23000 IPR006982 Glutamate synthase, central-N VA249_23000 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily VA249_23000 IPR002489 Glutamate synthase, alpha subunit, C-terminal VA249_23000 IPR017932 Glutamine amidotransferase type 2 domain VA249_23010 IPR009051 Alpha-helical ferredoxin VA249_23010 IPR023753 FAD/NAD(P)-binding domain VA249_23010 IPR036188 FAD/NAD(P)-binding domain superfamily VA249_23010 IPR028261 Dihydroprymidine dehydrogenase domain II VA249_23010 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 VA249_23020 IPR002932 Glutamate synthase domain VA249_23020 IPR029055 Nucleophile aminohydrolases, N-terminal VA249_23020 IPR006982 Glutamate synthase, central-N VA249_23020 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily VA249_23020 IPR002489 Glutamate synthase, alpha subunit, C-terminal VA249_23020 IPR017932 Glutamine amidotransferase type 2 domain VA249_23020 IPR013785 Aldolase-type TIM barrel VA249_23030 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 VA249_23030 IPR028261 Dihydroprymidine dehydrogenase domain II VA249_23030 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VA249_23030 IPR036188 FAD/NAD(P)-binding domain superfamily VA249_23030 IPR023753 FAD/NAD(P)-binding domain VA249_23030 IPR009051 Alpha-helical ferredoxin VA249_23050 IPR035994 Nucleoside phosphorylase superfamily VA249_23050 IPR000845 Nucleoside phosphorylase domain VA249_23050 IPR010049 MTA/SAH nucleosidase VA249_23070 IPR023544 ABC transporter, vitamin B12-binding protein VA249_23070 IPR002491 ABC transporter periplasmic binding domain VA249_23080 IPR005115 Uncharacterised domain UPF0126 VA249_23090 IPR036390 Winged helix DNA-binding domain superfamily VA249_23090 IPR000847 Transcription regulator HTH, LysR VA249_23090 IPR005119 LysR, substrate-binding VA249_23090 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_23100 IPR002781 Transmembrane protein TauE-like VA249_23110 IPR006275 Carbamoyl-phosphate synthase, large subunit VA249_23110 IPR011607 Methylglyoxal synthase-like domain VA249_23110 IPR016185 Pre-ATP-grasp domain superfamily VA249_23110 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain VA249_23110 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain VA249_23110 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily VA249_23110 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain VA249_23110 IPR033937 Carbamoyl-phosphate synthase large chain, methylglyoxal synthase-like domain VA249_23110 IPR011761 ATP-grasp fold VA249_23110 IPR036914 Methylglyoxal synthase-like domain superfamily VA249_23120 IPR017926 Glutamine amidotransferase VA249_23120 IPR035686 Carbamoyl-phosphate synthase small subunit, GATase1 domain VA249_23120 IPR029062 Class I glutamine amidotransferase-like VA249_23120 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily VA249_23120 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain VA249_23120 IPR006274 Carbamoyl-phosphate synthase, small subunit VA249_23130 IPR000846 Dihydrodipicolinate reductase, N-terminal VA249_23130 IPR036291 NAD(P)-binding domain superfamily VA249_23130 IPR023940 Dihydrodipicolinate reductase VA249_23130 IPR022664 Dihydrodipicolinate reductase, conserved site VA249_23130 IPR022663 Dihydrodipicolinate reductase, C-terminal VA249_23140 IPR020084 NUDIX hydrolase, conserved site VA249_23140 IPR020476 NUDIX hydrolase VA249_23140 IPR003561 Mutator MutT VA249_23140 IPR000086 NUDIX hydrolase domain VA249_23140 IPR015797 NUDIX hydrolase-like domain superfamily VA249_23150 IPR036670 SecA, preprotein cross-linking domain superfamily VA249_23150 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_23150 IPR004027 SEC-C motif VA249_23150 IPR000185 Protein translocase subunit SecA VA249_23150 IPR020937 SecA conserved site VA249_23150 IPR011115 SecA DEAD-like, N-terminal VA249_23150 IPR014018 SecA motor DEAD VA249_23150 IPR011130 SecA, preprotein cross-linking domain VA249_23150 IPR011116 SecA Wing/Scaffold VA249_23150 IPR036266 SecA, Wing/Scaffold superfamily VA249_23170 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal VA249_23170 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal VA249_23170 IPR020568 Ribosomal protein S5 domain 2-type fold VA249_23170 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase VA249_23180 IPR020805 Cell division protein FtsZ, conserved site VA249_23180 IPR003008 Tubulin/FtsZ, GTPase domain VA249_23180 IPR036525 Tubulin/FtsZ, GTPase domain superfamily VA249_23180 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain VA249_23180 IPR008280 Tubulin/FtsZ, C-terminal VA249_23180 IPR000158 Cell division protein FtsZ VA249_23180 IPR024757 Cell division protein FtsZ, C-terminal VA249_23190 IPR020823 Cell division protein FtsA VA249_23190 IPR003494 SHS2 domain inserted in FtsA VA249_23200 IPR013685 POTRA domain, FtsQ-type VA249_23200 IPR034746 POTRA domain VA249_23200 IPR026579 Cell division protein FtsQ VA249_23200 IPR005548 Cell division protein FtsQ/DivIB VA249_23210 IPR000713 Mur ligase, N-terminal catalytic domain VA249_23210 IPR013221 Mur ligase, central VA249_23210 IPR036615 Mur ligase, C-terminal domain superfamily VA249_23210 IPR004101 Mur ligase, C-terminal VA249_23210 IPR036565 Mur-like, catalytic domain superfamily VA249_23210 IPR005758 UDP-N-acetylmuramate--L-alanine ligase VA249_23220 IPR007235 Glycosyl transferase, family 28, C-terminal VA249_23220 IPR004276 Glycosyltransferase family 28, N-terminal domain VA249_23220 IPR006009 N-acetylglucosaminyltransferase, MurG VA249_23230 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA VA249_23230 IPR013437 Probable peptidoglycan glycosyltransferase FtsW VA249_23230 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site VA249_23240 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase VA249_23240 IPR013221 Mur ligase, central VA249_23240 IPR004101 Mur ligase, C-terminal VA249_23240 IPR036565 Mur-like, catalytic domain superfamily VA249_23240 IPR036615 Mur ligase, C-terminal domain superfamily VA249_23250 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase VA249_23250 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site VA249_23250 IPR000715 Glycosyl transferase, family 4 VA249_23260 IPR036565 Mur-like, catalytic domain superfamily VA249_23260 IPR004101 Mur ligase, C-terminal VA249_23260 IPR036615 Mur ligase, C-terminal domain superfamily VA249_23260 IPR013221 Mur ligase, central VA249_23260 IPR000713 Mur ligase, N-terminal catalytic domain VA249_23260 IPR035911 MurE/MurF, N-terminal VA249_23260 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase VA249_23270 IPR035911 MurE/MurF, N-terminal VA249_23270 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase VA249_23270 IPR000713 Mur ligase, N-terminal catalytic domain VA249_23270 IPR013221 Mur ligase, central VA249_23270 IPR036615 Mur ligase, C-terminal domain superfamily VA249_23270 IPR036565 Mur-like, catalytic domain superfamily VA249_23270 IPR004101 Mur ligase, C-terminal VA249_23280 IPR036138 Penicillin-binding protein, dimerisation domain superfamily VA249_23280 IPR012338 Beta-lactamase/transpeptidase-like VA249_23280 IPR037532 Peptidoglycan D,D-transpeptidase FtsI VA249_23280 IPR005311 Penicillin-binding protein, dimerisation domain VA249_23280 IPR001460 Penicillin-binding protein, transpeptidase VA249_23290 IPR011922 Cell division protein FtsL VA249_23300 IPR002903 Ribosomal RNA small subunit methyltransferase H VA249_23300 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VA249_23300 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily VA249_23320 IPR014777 Tetrapyrrole methylase, subdomain 1 VA249_23320 IPR035996 Tetrapyrrole methylase superfamily VA249_23320 IPR014776 Tetrapyrrole methylase, subdomain 2 VA249_23320 IPR008189 rRNA small subunit methyltransferase I VA249_23320 IPR018063 SAM-dependent methyltransferase RsmI, conserved site VA249_23320 IPR000878 Tetrapyrrole methylase VA249_23330 IPR007443 Penicillin-binding protein activator LpoA VA249_23330 IPR028082 Periplasmic binding protein-like I VA249_23330 IPR011990 Tetratricopeptide-like helical domain superfamily VA249_23340 IPR011335 Restriction endonuclease type II-like VA249_23340 IPR011856 tRNA endonuclease-like domain superfamily VA249_23340 IPR003509 Uncharacterised protein family UPF0102 VA249_23350 IPR001347 Sugar isomerase (SIS) VA249_23350 IPR023070 DnaA initiator-associating protein VA249_23350 IPR035461 GmhA/DiaA VA249_23360 IPR014004 Transport-associated and nodulation domain, bacteria VA249_23360 IPR007055 BON domain VA249_23370 IPR007481 Stringent starvation protein B VA249_23370 IPR036760 SspB-like superfamily VA249_23380 IPR036249 Thioredoxin-like superfamily VA249_23380 IPR040079 Glutathione Transferase family VA249_23380 IPR004046 Glutathione S-transferase, C-terminal VA249_23380 IPR004045 Glutathione S-transferase, N-terminal VA249_23380 IPR036282 Glutathione S-transferase, C-terminal domain superfamily VA249_23380 IPR010987 Glutathione S-transferase, C-terminal-like VA249_23380 IPR034341 Stringent starvation protein A, N-terminal VA249_23390 IPR009056 Cytochrome c-like domain VA249_23390 IPR036909 Cytochrome c-like domain superfamily VA249_23390 IPR002326 Cytochrome c1 VA249_23400 IPR016174 Di-haem cytochrome, transmembrane VA249_23400 IPR030689 Cytochrome b VA249_23400 IPR027387 Cytochrome b/b6-like domain superfamily VA249_23400 IPR036150 Cytochrome b/b6, C-terminal domain superfamily VA249_23400 IPR005798 Cytochrome b/b6, C-terminal VA249_23400 IPR005797 Cytochrome b/b6, N-terminal VA249_23410 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit VA249_23410 IPR005805 Rieske iron-sulphur protein, C-terminal VA249_23410 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal VA249_23410 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily VA249_23410 IPR014349 Rieske iron-sulphur protein VA249_23410 IPR017941 Rieske [2Fe-2S] iron-sulphur domain VA249_23420 IPR020568 Ribosomal protein S5 domain 2-type fold VA249_23420 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VA249_23420 IPR000754 Ribosomal protein S9 VA249_23420 IPR023035 Ribosomal protein S9, bacterial/plastid VA249_23420 IPR020574 Ribosomal protein S9, conserved site VA249_23430 IPR023563 Ribosomal protein L13, conserved site VA249_23430 IPR036899 Ribosomal protein L13 superfamily VA249_23430 IPR005822 Ribosomal protein L13 VA249_23430 IPR005823 Ribosomal protein L13, bacterial-type VA249_23440 IPR005654 ATPase, AFG1-like VA249_23440 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_23440 IPR030870 Cell division protein ZapE VA249_23450 IPR009386 Protein of unknown function DUF1043 VA249_23460 IPR001478 PDZ domain VA249_23460 IPR036034 PDZ superfamily VA249_23460 IPR011782 Peptidase S1C, Do VA249_23460 IPR009003 Peptidase S1, PA clan VA249_23460 IPR001940 Peptidase S1C VA249_23470 IPR001940 Peptidase S1C VA249_23470 IPR011783 Peptidase S1C, DegS VA249_23470 IPR009003 Peptidase S1, PA clan VA249_23470 IPR001478 PDZ domain VA249_23470 IPR036034 PDZ superfamily VA249_23480 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat VA249_23480 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal VA249_23480 IPR013760 DNA topoisomerase, type IIA-like domain superfamily VA249_23480 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal VA249_23480 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta VA249_23480 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily VA249_23480 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative VA249_23490 IPR006171 TOPRIM domain VA249_23490 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative VA249_23490 IPR018522 DNA topoisomerase, type IIA, conserved site VA249_23490 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 VA249_23490 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal VA249_23490 IPR013760 DNA topoisomerase, type IIA-like domain superfamily VA249_23490 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VA249_23490 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VA249_23490 IPR020568 Ribosomal protein S5 domain 2-type fold VA249_23490 IPR003594 Histidine kinase/HSP90-like ATPase VA249_23490 IPR002288 DNA gyrase B subunit, C-terminal VA249_23490 IPR001241 DNA topoisomerase, type IIA VA249_23500 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA VA249_23500 IPR029058 Alpha/Beta hydrolase fold VA249_23510 IPR029052 Metallo-dependent phosphatase-like VA249_23510 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA VA249_23510 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type VA249_23520 IPR009659 Protein of unknown function DUF1249 VA249_23530 IPR004385 Nucleoside diphosphate pyrophosphatase VA249_23530 IPR000086 NUDIX hydrolase domain VA249_23530 IPR020084 NUDIX hydrolase, conserved site VA249_23530 IPR015797 NUDIX hydrolase-like domain superfamily VA249_23540 IPR010130 Type I secretion outer membrane protein, TolC VA249_23540 IPR003423 Outer membrane efflux protein VA249_23550 IPR023030 Bifunctional protein HldE VA249_23550 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site VA249_23550 IPR004821 Cytidyltransferase-like domain VA249_23550 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VA249_23550 IPR029056 Ribokinase-like VA249_23550 IPR011914 RfaE bifunctional protein, domain II VA249_23550 IPR011913 RfaE bifunctional protein, domain I VA249_23550 IPR011611 Carbohydrate kinase PfkB VA249_23560 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain VA249_23560 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme VA249_23560 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase VA249_23570 IPR029151 Periplasmic sensor-like domain superfamily VA249_23570 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VA249_23570 IPR033479 Double Cache domain 1 VA249_23570 IPR003660 HAMP domain VA249_23580 IPR039013 Inorganic triphosphatase YgiF VA249_23580 IPR007899 CHAD domain VA249_23580 IPR033469 CYTH-like domain superfamily VA249_23580 IPR023577 CYTH domain VA249_23590 IPR018445 Putative phosphate transport regulator VA249_23590 IPR038078 PhoU-like domain superfamily VA249_23590 IPR002727 Protein of unknown function DUF47 VA249_23600 IPR001204 Phosphate transporter VA249_23610 IPR003646 SH3-like domain, bacterial-type VA249_23610 IPR016476 SH3 domain protein VA249_23630 IPR002477 Peptidoglycan binding-like VA249_23630 IPR036365 PGBD-like superfamily VA249_23630 IPR036366 PGBD superfamily VA249_23630 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_23630 IPR003593 AAA+ ATPase domain VA249_23640 IPR003607 HD/PDEase domain VA249_23640 IPR006674 HD domain VA249_23640 IPR012006 tRNA nucleotidyltransferase, proteobacteria VA249_23640 IPR002646 Poly A polymerase, head domain VA249_23640 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain VA249_23650 IPR003824 Undecaprenyl-diphosphatase UppP VA249_23660 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK VA249_23660 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily VA249_23670 IPR006156 Dihydroneopterin aldolase VA249_23670 IPR006157 Dihydroneopterin aldolase/epimerase domain VA249_23680 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY VA249_23690 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY VA249_23700 IPR019913 Pyrimidine utilisation protein RutD VA249_23700 IPR000073 Alpha/beta hydrolase fold-1 VA249_23700 IPR029058 Alpha/Beta hydrolase fold VA249_23710 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD VA249_23710 IPR000905 Gcp-like domain VA249_23710 IPR017861 Kae1/TsaD family VA249_23710 IPR017860 Peptidase M22, conserved site VA249_23720 IPR001911 Ribosomal protein S21 VA249_23720 IPR038380 Ribosomal protein S21 superfamily VA249_23720 IPR018278 Ribosomal protein S21, conserved site VA249_23730 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like VA249_23730 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 VA249_23730 IPR019004 Uncharacterised protein YqeY/Aim41 VA249_23730 IPR042184 YqeY/Aim41, N-terminal domain VA249_23740 IPR019475 DNA primase, DnaB-helicase binding domain VA249_23740 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal VA249_23740 IPR013264 DNA primase, catalytic core, N-terminal VA249_23740 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily VA249_23740 IPR002694 Zinc finger, CHC2-type VA249_23740 IPR006295 DNA primase, DnaG VA249_23740 IPR013173 DNA primase DnaG, DnaB-binding domain VA249_23740 IPR036977 DNA Primase, CHC2-type zinc finger VA249_23740 IPR030846 DNA primase DnaG, bacteria VA249_23740 IPR034151 Bacterial DnaG primase, TOPRIM domain VA249_23740 IPR006171 TOPRIM domain VA249_23750 IPR009042 RNA polymerase sigma-70 region 1.2 VA249_23750 IPR000943 RNA polymerase sigma-70 VA249_23750 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_23750 IPR028630 RNA polymerase sigma factor RpoD VA249_23750 IPR013325 RNA polymerase sigma factor, region 2 VA249_23750 IPR013324 RNA polymerase sigma factor, region 3/4-like VA249_23750 IPR012760 RNA polymerase sigma factor RpoD, C-terminal VA249_23750 IPR014284 RNA polymerase sigma-70 like domain VA249_23750 IPR042189 Sigma-70 factor, region 1.1 superfamily VA249_23750 IPR007127 RNA polymerase sigma factor 70, region 1.1 VA249_23750 IPR007631 RNA polymerase sigma factor 70, non-essential domain VA249_23750 IPR007630 RNA polymerase sigma-70 region 4 VA249_23750 IPR007624 RNA polymerase sigma-70 region 3 VA249_23750 IPR007627 RNA polymerase sigma-70 region 2 VA249_23770 IPR035490 GlmS/FrlB, SIS domain 2 VA249_23770 IPR017932 Glutamine amidotransferase type 2 domain VA249_23770 IPR001347 Sugar isomerase (SIS) VA249_23770 IPR029055 Nucleophile aminohydrolases, N-terminal VA249_23770 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising VA249_23770 IPR035466 GlmS/AgaS, SIS domain 1 VA249_23780 IPR014036 DeoR C-terminal sensor domain VA249_23780 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_23780 IPR018356 Transcription regulator, HTH DeoR-type, conserved site VA249_23780 IPR001034 DeoR-type HTH domain VA249_23780 IPR036390 Winged helix DNA-binding domain superfamily VA249_23780 IPR037171 NagB/RpiA transferase-like VA249_23790 IPR015806 Pyruvate kinase, insert domain superfamily VA249_23790 IPR036918 Pyruvate kinase, C-terminal domain superfamily VA249_23790 IPR001697 Pyruvate kinase VA249_23790 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily VA249_23790 IPR040442 Pyruvate kinase-like domain superfamily VA249_23790 IPR011037 Pyruvate kinase-like, insert domain superfamily VA249_23790 IPR018209 Pyruvate kinase, active site VA249_23790 IPR015793 Pyruvate kinase, barrel VA249_23790 IPR015795 Pyruvate kinase, C-terminal VA249_23810 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region VA249_23810 IPR029787 Nucleotide cyclase VA249_23810 IPR000160 GGDEF domain VA249_23820 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal VA249_23820 IPR019455 Acetolactate synthase, small subunit, C-terminal VA249_23820 IPR002912 ACT domain VA249_23820 IPR004789 Acetolactate synthase, small subunit VA249_23820 IPR039557 AHAS, ACT domain VA249_23830 IPR012846 Acetolactate synthase, large subunit, biosynthetic VA249_23830 IPR012000 Thiamine pyrophosphate enzyme, central domain VA249_23830 IPR039368 Acetolactate synthase large subunit, TPP binding domain VA249_23830 IPR029035 DHS-like NAD/FAD-binding domain superfamily VA249_23830 IPR029061 Thiamin diphosphate-binding fold VA249_23830 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain VA249_23830 IPR000399 TPP-binding enzyme, conserved site VA249_23830 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding VA249_23840 IPR042099 AMP-dependent synthetase-like superfamily VA249_23840 IPR020845 AMP-binding, conserved site VA249_23840 IPR000873 AMP-dependent synthetase/ligase VA249_23850 IPR036390 Winged helix DNA-binding domain superfamily VA249_23850 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_23850 IPR000847 Transcription regulator HTH, LysR VA249_23850 IPR005119 LysR, substrate-binding VA249_23870 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily VA249_23870 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase VA249_23890 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain VA249_23890 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site VA249_23890 IPR013785 Aldolase-type TIM barrel VA249_23890 IPR005671 2-isopropylmalate synthase, bacterial-type VA249_23890 IPR000891 Pyruvate carboxyltransferase VA249_23890 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily VA249_23900 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site VA249_23900 IPR024084 Isopropylmalate dehydrogenase-like domain VA249_23900 IPR004429 Isopropylmalate dehydrogenase VA249_23910 IPR033941 3-Isopropylmalate dehydratase, catalytic domain VA249_23910 IPR036008 Aconitase, iron-sulfur domain VA249_23910 IPR018136 Aconitase family, 4Fe-4S cluster binding site VA249_23910 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain VA249_23910 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 VA249_23910 IPR004430 3-isopropylmalate dehydratase, large subunit VA249_23920 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel VA249_23920 IPR033940 3-isopropylmalate dehydratase, swivel domain VA249_23920 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain VA249_23920 IPR004431 3-isopropylmalate dehydratase, small subunit VA249_23940 IPR036869 Chaperone J-domain superfamily VA249_23940 IPR001623 DnaJ domain VA249_23940 IPR007791 Co-chaperone DjlA, N-terminal VA249_23940 IPR023749 Co-chaperone DjlA VA249_23940 IPR029024 TerB-like VA249_23950 IPR007543 LptD, C-terminal VA249_23950 IPR020889 LPS-assembly protein LptD VA249_23950 IPR005653 Organic solvent tolerance-like, N-terminal VA249_23960 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type VA249_23960 IPR027304 Trigger factor/SurA domain superfamily VA249_23960 IPR015391 SurA N-terminal VA249_23960 IPR023034 Peptidyl-prolyl isomerase SurA VA249_23970 IPR005255 PdxA family VA249_23970 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase VA249_23980 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VA249_23980 IPR023165 rRNA adenine dimethylase-like VA249_23980 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm VA249_23980 IPR011530 Ribosomal RNA adenine dimethylase VA249_23980 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site VA249_23980 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal VA249_23990 IPR023065 Uncharacterised protein family ApaG VA249_23990 IPR036767 ApaG domain superfamily VA249_23990 IPR007474 ApaG domain VA249_24000 IPR029052 Metallo-dependent phosphatase-like VA249_24000 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type VA249_24000 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) VA249_24010 IPR024072 Dihydrofolate reductase-like domain superfamily VA249_24010 IPR001796 Dihydrofolate reductase domain VA249_24010 IPR017925 Dihydrofolate reductase conserved site VA249_24010 IPR012259 Dihydrofolate reductase VA249_24020 IPR024528 Threonine/Serine exporter, ThrE VA249_24020 IPR020914 Uncharacterised protein family UPF0442 VA249_24030 IPR010619 Putative threonine/serine exporter VA249_24040 IPR036726 GTP1/OBG domain superfamily VA249_24040 IPR006073 GTP binding domain VA249_24040 IPR031167 OBG-type guanine nucleotide-binding (G) domain VA249_24040 IPR035101 GTP-binding protein, Obg-type VA249_24040 IPR014100 GTP-binding protein Obg/CgtA VA249_24040 IPR006074 GTP1/OBG, conserved site VA249_24040 IPR006169 GTP1/OBG domain VA249_24040 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_24050 IPR001684 Ribosomal protein L27 VA249_24050 IPR018261 Ribosomal protein L27, conserved site VA249_24060 IPR018258 Ribosomal protein L21, conserved site VA249_24060 IPR001787 Ribosomal protein L21 VA249_24060 IPR036164 L21-like superfamily VA249_24060 IPR028909 Ribosomal protein L21-like VA249_24070 IPR000092 Polyprenyl synthetase VA249_24070 IPR008949 Isoprenoid synthase domain superfamily VA249_24070 IPR033749 Polyprenyl synthetase, conserved site VA249_24090 IPR023958 Malate dehydrogenase, type 1, bacterial VA249_24090 IPR001557 L-lactate/malate dehydrogenase VA249_24090 IPR022383 Lactate/malate dehydrogenase, C-terminal VA249_24090 IPR001236 Lactate/malate dehydrogenase, N-terminal VA249_24090 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal VA249_24090 IPR001252 Malate dehydrogenase, active site VA249_24090 IPR010097 Malate dehydrogenase, type 1 VA249_24090 IPR036291 NAD(P)-binding domain superfamily VA249_24100 IPR001669 Arginine repressor VA249_24100 IPR020899 Arginine repressor, C-terminal VA249_24100 IPR036251 Arginine repressor, C-terminal domain superfamily VA249_24100 IPR020900 Arginine repressor, DNA-binding domain VA249_24100 IPR036390 Winged helix DNA-binding domain superfamily VA249_24100 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_24110 IPR011852 TRAP transporter solute receptor, TAXI family VA249_24140 IPR005968 Thiamine ABC transporter, ATP-binding protein ThiQ VA249_24140 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_24140 IPR017871 ABC transporter, conserved site VA249_24140 IPR003439 ABC transporter-like VA249_24140 IPR003593 AAA+ ATPase domain VA249_24150 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VA249_24150 IPR035906 MetI-like superfamily VA249_24150 IPR005947 Thiamine ABC transporter, permease protein VA249_24160 IPR005967 Thiamin/thiamin pyrophosphate ABC transporter, substrate-binding protein, Proteobacteria VA249_24160 IPR006061 Solute-binding family 1, conserved site VA249_24160 IPR005948 Thiamine/thiamin pyrophosphate-binding periplasmic protein, ABC transporter VA249_24170 IPR036551 Flavin prenyltransferase-like VA249_24170 IPR003382 Flavoprotein VA249_24170 IPR004507 Flavin prenyltransferase UbiX-like VA249_24180 IPR036565 Mur-like, catalytic domain superfamily VA249_24180 IPR005757 Murein peptide ligase VA249_24180 IPR000713 Mur ligase, N-terminal catalytic domain VA249_24180 IPR004101 Mur ligase, C-terminal VA249_24180 IPR036615 Mur ligase, C-terminal domain superfamily VA249_24180 IPR013221 Mur ligase, central VA249_24190 IPR000146 Fructose-1,6-bisphosphatase class 1 VA249_24190 IPR028343 Fructose-1,6-bisphosphatase VA249_24190 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal VA249_24190 IPR020548 Fructose-1,6-bisphosphatase, active site VA249_24200 IPR008162 Inorganic pyrophosphatase VA249_24200 IPR036649 Inorganic pyrophosphatase superfamily VA249_24210 IPR039126 Gamma-glutamylaminecyclotransferase VA249_24210 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily VA249_24210 IPR013024 Gamma-glutamyl cyclotransferase-like VA249_24210 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like VA249_24220 IPR007452 Translocation and assembly module TamB VA249_24230 IPR000184 Bacterial surface antigen (D15) VA249_24230 IPR010827 POTRA domain, BamA/TamA-like VA249_24230 IPR035243 TamA, POTRA domain 1 VA249_24230 IPR034746 POTRA domain VA249_24230 IPR039910 Surface antigen D15-like VA249_24240 IPR002569 Peptide methionine sulphoxide reductase MsrA VA249_24240 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily VA249_24260 IPR006513 Conserved hypothetical protein CHP01626, YtfJ VA249_24290 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_24290 IPR003439 ABC transporter-like VA249_24290 IPR015854 ABC transporter, lipoprotein release, LolD VA249_24290 IPR017871 ABC transporter, conserved site VA249_24290 IPR003593 AAA+ ATPase domain VA249_24290 IPR011924 Lipoprotein releasing system, ATP-binding protein VA249_24330 IPR002891 Adenylyl-sulfate kinase VA249_24330 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_24340 IPR004680 Citrate transporter-like domain VA249_24340 IPR031312 Sodium/sulphate symporter, conserved site VA249_24340 IPR006037 Regulator of K+ conductance, C-terminal VA249_24340 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily VA249_24350 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal VA249_24350 IPR000795 Transcription factor, GTP-binding domain VA249_24350 IPR009000 Translation protein, beta-barrel domain superfamily VA249_24350 IPR005225 Small GTP-binding protein domain VA249_24350 IPR011779 Sulphate adenylyltransferase, large subunit VA249_24350 IPR031157 Tr-type G domain, conserved site VA249_24350 IPR041757 Sulfate adenylyltransferase subunit CysN, GTP-binding domain VA249_24350 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_24360 IPR011784 Sulphate adenylyltransferase, small subunit VA249_24360 IPR002500 Phosphoadenosine phosphosulphate reductase VA249_24360 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VA249_24370 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site VA249_24370 IPR006367 Sirohaem synthase, N-terminal VA249_24370 IPR019478 Sirohaem synthase, dimerisation domain VA249_24370 IPR028281 Siroheme synthase, central domain VA249_24370 IPR012409 Sirohaem synthase VA249_24370 IPR036291 NAD(P)-binding domain superfamily VA249_24370 IPR006366 Uroporphyrin-III C-methyltransferase VA249_24370 IPR014776 Tetrapyrrole methylase, subdomain 2 VA249_24370 IPR014777 Tetrapyrrole methylase, subdomain 1 VA249_24370 IPR035996 Tetrapyrrole methylase superfamily VA249_24370 IPR000878 Tetrapyrrole methylase VA249_24370 IPR037115 Sirohaem synthase, dimerisation domain superfamily VA249_24380 IPR029052 Metallo-dependent phosphatase-like VA249_24380 IPR006294 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase VA249_24380 IPR006179 5'-Nucleotidase/apyrase VA249_24380 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type VA249_24380 IPR006146 5'-Nucleotidase, conserved site VA249_24380 IPR008334 5'-Nucleotidase, C-terminal VA249_24380 IPR041827 CpdB, N-terminal metallophosphatase domain VA249_24380 IPR036907 5'-Nucleotidase, C-terminal domain superfamily VA249_24400 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain VA249_24400 IPR011545 DEAD/DEAH box helicase domain VA249_24400 IPR028619 ATP-dependent RNA helicase DbpA VA249_24400 IPR014001 Helicase superfamily 1/2, ATP-binding domain VA249_24400 IPR001650 Helicase, C-terminal VA249_24400 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily VA249_24400 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_24400 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VA249_24400 IPR014014 RNA helicase, DEAD-box type, Q motif VA249_24410 IPR016181 Acyl-CoA N-acyltransferase VA249_24410 IPR000182 GNAT domain VA249_24430 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily VA249_24430 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal VA249_24430 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain VA249_24450 IPR036373 Ribosomal protein L17 superfamily VA249_24450 IPR000456 Ribosomal protein L17 VA249_24460 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type VA249_24460 IPR011773 DNA-directed RNA polymerase, alpha subunit VA249_24460 IPR036603 RNA polymerase, RBP11-like subunit VA249_24460 IPR011260 RNA polymerase, alpha subunit, C-terminal VA249_24460 IPR011262 DNA-directed RNA polymerase, insert domain VA249_24460 IPR036643 DNA-directed RNA polymerase, insert domain superfamily VA249_24470 IPR022801 Ribosomal protein S4/S9 VA249_24470 IPR001912 Ribosomal protein S4/S9, N-terminal VA249_24470 IPR005709 Ribosomal protein S4, bacterial-type VA249_24470 IPR018079 Ribosomal protein S4, conserved site VA249_24470 IPR002942 RNA-binding S4 domain VA249_24470 IPR036986 RNA-binding S4 domain superfamily VA249_24480 IPR001971 Ribosomal protein S11 VA249_24480 IPR018102 Ribosomal S11, conserved site VA249_24480 IPR019981 Ribosomal protein S11, bacterial-type VA249_24480 IPR036967 Ribosomal protein S11 superfamily VA249_24490 IPR027437 30s ribosomal protein S13, C-terminal VA249_24490 IPR001892 Ribosomal protein S13 VA249_24490 IPR010979 Ribosomal protein S13-like, H2TH VA249_24490 IPR019980 Ribosomal protein S13, bacterial-type VA249_24490 IPR018269 Ribosomal protein S13, conserved site VA249_24500 IPR026593 Protein translocase subunit SecY VA249_24500 IPR002208 SecY/SEC61-alpha family VA249_24500 IPR030659 SecY conserved site VA249_24500 IPR023201 SecY domain superfamily VA249_24510 IPR021131 Ribosomal protein L18e/L15P VA249_24510 IPR005749 Ribosomal protein L15, bacterial-type VA249_24510 IPR001196 Ribosomal protein L15, conserved site VA249_24510 IPR030878 Ribosomal protein L15 VA249_24510 IPR036227 Ribosomal L18e/L15P superfamily VA249_24520 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily VA249_24520 IPR005996 Ribosomal protein L30, bacterial-type VA249_24520 IPR018038 Ribosomal protein L30, conserved site VA249_24520 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain VA249_24530 IPR000851 Ribosomal protein S5 VA249_24530 IPR005712 Ribosomal protein S5, bacterial-type VA249_24530 IPR005324 Ribosomal protein S5, C-terminal VA249_24530 IPR020568 Ribosomal protein S5 domain 2-type fold VA249_24530 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VA249_24530 IPR013810 Ribosomal protein S5, N-terminal VA249_24530 IPR018192 Ribosomal protein S5, N-terminal, conserved site VA249_24540 IPR005484 Ribosomal protein L18 VA249_24540 IPR004389 Ribosomal protein L18, bacterial-type VA249_24550 IPR002358 Ribosomal protein L6, conserved site VA249_24550 IPR019906 Ribosomal protein L6, bacterial-type VA249_24550 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily VA249_24550 IPR020040 Ribosomal protein L6, alpha-beta domain VA249_24550 IPR000702 Ribosomal protein L6 VA249_24560 IPR035987 Ribosomal protein S8 superfamily VA249_24560 IPR000630 Ribosomal protein S8 VA249_24570 IPR001209 Ribosomal protein S14 VA249_24570 IPR023036 Ribosomal protein S14, bacterial/plastid VA249_24570 IPR018271 Ribosomal protein S14, conserved site VA249_24580 IPR002132 Ribosomal protein L5 VA249_24580 IPR020930 Ribosomal protein L5, bacterial-type VA249_24580 IPR031309 Ribosomal protein L5, C-terminal VA249_24580 IPR020929 Ribosomal protein L5, conserved site VA249_24580 IPR022803 Ribosomal protein L5 domain superfamily VA249_24580 IPR031310 Ribosomal protein L5, N-terminal VA249_24590 IPR008991 Translation protein SH3-like domain superfamily VA249_24590 IPR005825 Ribosomal protein L24/L26, conserved site VA249_24590 IPR014722 Ribosomal protein L2, domain 2 VA249_24590 IPR041988 Ribosomal Protein L26/L24, KOW domain VA249_24590 IPR005824 KOW VA249_24590 IPR003256 Ribosomal protein L24 VA249_24600 IPR036853 Ribosomal protein L14 superfamily VA249_24600 IPR000218 Ribosomal protein L14P VA249_24600 IPR005745 Ribosomal protein L14P, bacterial-type VA249_24600 IPR019972 Ribosomal protein L14P, conserved site VA249_24610 IPR012340 Nucleic acid-binding, OB-fold VA249_24610 IPR019984 30S ribosomal protein S17 VA249_24610 IPR000266 Ribosomal protein S17/S11 VA249_24610 IPR019979 Ribosomal protein S17, conserved site VA249_24620 IPR036049 Ribosomal protein L29/L35 superfamily VA249_24620 IPR018254 Ribosomal protein L29, conserved site VA249_24620 IPR001854 Ribosomal protein L29/L35 VA249_24630 IPR036920 Ribosomal protein L10e/L16 superfamily VA249_24630 IPR000114 Ribosomal protein L16 VA249_24630 IPR020798 Ribosomal protein L16, conserved site VA249_24630 IPR016180 Ribosomal protein L10e/L16 VA249_24640 IPR018280 Ribosomal protein S3, conserved site VA249_24640 IPR036419 Ribosomal protein S3, C-terminal domain superfamily VA249_24640 IPR004087 K Homology domain VA249_24640 IPR005704 Ribosomal protein S3, bacterial-type VA249_24640 IPR009019 K homology domain superfamily, prokaryotic type VA249_24640 IPR004044 K Homology domain, type 2 VA249_24640 IPR015946 K homology domain-like, alpha/beta VA249_24640 IPR001351 Ribosomal protein S3, C-terminal VA249_24650 IPR001063 Ribosomal protein L22/L17 VA249_24650 IPR018260 Ribosomal protein L22/L17, conserved site VA249_24650 IPR036394 Ribosomal protein L22/L17 superfamily VA249_24650 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type VA249_24660 IPR023575 Ribosomal protein S19, superfamily VA249_24660 IPR020934 Ribosomal protein S19 conserved site VA249_24660 IPR002222 Ribosomal protein S19/S15 VA249_24660 IPR005732 Ribosomal protein S19, bacterial-type VA249_24670 IPR012340 Nucleic acid-binding, OB-fold VA249_24670 IPR022666 Ribosomal Proteins L2, RNA binding domain VA249_24670 IPR014722 Ribosomal protein L2, domain 2 VA249_24670 IPR002171 Ribosomal protein L2 VA249_24670 IPR005880 Ribosomal protein L2, bacterial/organellar-type VA249_24670 IPR022669 Ribosomal protein L2, C-terminal VA249_24670 IPR022671 Ribosomal protein L2, conserved site VA249_24670 IPR014726 Ribosomal protein L2, domain 3 VA249_24670 IPR008991 Translation protein SH3-like domain superfamily VA249_24680 IPR013025 Ribosomal protein L25/L23 VA249_24680 IPR001014 Ribosomal protein L23/L25, conserved site VA249_24680 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily VA249_24680 IPR012678 Ribosomal protein L23/L15e core domain superfamily VA249_24690 IPR013005 50S ribosomal protein uL4 VA249_24690 IPR002136 Ribosomal protein L4/L1e VA249_24690 IPR023574 Ribosomal protein L4 domain superfamily VA249_24700 IPR000597 Ribosomal protein L3 VA249_24700 IPR019927 Ribosomal protein L3, bacterial/organelle-type VA249_24700 IPR019926 Ribosomal protein L3, conserved site VA249_24700 IPR009000 Translation protein, beta-barrel domain superfamily VA249_24710 IPR036838 Ribosomal protein S10 domain superfamily VA249_24710 IPR027486 Ribosomal protein S10 domain VA249_24710 IPR018268 Ribosomal protein S10, conserved site VA249_24710 IPR001848 Ribosomal protein S10 VA249_24720 IPR034704 L28p-like VA249_24720 IPR002150 Ribosomal protein L31 VA249_24720 IPR027491 Ribosomal protein L31 type A VA249_24720 IPR042105 Ribosomal protein L31 superfamily VA249_24730 IPR041222 Primosomal protein N', 3' DNA-binding domain VA249_24730 IPR041236 Primosomal protein N, C-terminal domain VA249_24730 IPR042115 Primosomal protein N', 3' DNA-binding domain superfamily VA249_24730 IPR040498 PriA DNA helicase, Cys-rich region (CRR) domain VA249_24730 IPR005259 Primosomal protein N' VA249_24730 IPR001650 Helicase, C-terminal VA249_24730 IPR014001 Helicase superfamily 1/2, ATP-binding domain VA249_24730 IPR011545 DEAD/DEAH box helicase domain VA249_24730 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_24740 IPR000843 LacI-type HTH domain VA249_24740 IPR010982 Lambda repressor-like, DNA-binding domain superfamily VA249_24740 IPR028082 Periplasmic binding protein-like I VA249_24760 IPR022281 ATP-dependent protease, HslV subunit VA249_24760 IPR029055 Nucleophile aminohydrolases, N-terminal VA249_24760 IPR001353 Proteasome, subunit alpha/beta VA249_24760 IPR023333 Proteasome B-type subunit VA249_24770 IPR004491 Heat shock protein HslU VA249_24770 IPR019489 Clp ATPase, C-terminal VA249_24770 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_24770 IPR003593 AAA+ ATPase domain VA249_24770 IPR003959 ATPase, AAA-type, core VA249_24780 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase VA249_24780 IPR000537 UbiA prenyltransferase family VA249_24780 IPR026046 UbiA prenyltransferase domain containing protein 1 VA249_24790 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily VA249_24790 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein VA249_24790 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria VA249_24790 IPR010203 Regulator of ribonuclease activity A VA249_24800 IPR009252 Cell division protein ZapB VA249_24810 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase VA249_24820 IPR014036 DeoR C-terminal sensor domain VA249_24820 IPR001034 DeoR-type HTH domain VA249_24820 IPR037171 NagB/RpiA transferase-like VA249_24820 IPR018356 Transcription regulator, HTH DeoR-type, conserved site VA249_24820 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_24820 IPR036390 Winged helix DNA-binding domain superfamily VA249_24860 IPR020861 Triosephosphate isomerase, active site VA249_24860 IPR000652 Triosephosphate isomerase VA249_24860 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic VA249_24860 IPR013785 Aldolase-type TIM barrel VA249_24860 IPR035990 Triosephosphate isomerase superfamily VA249_24870 IPR001509 NAD-dependent epimerase/dehydratase VA249_24870 IPR036291 NAD(P)-binding domain superfamily VA249_24880 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily VA249_24880 IPR036291 NAD(P)-binding domain superfamily VA249_24880 IPR017476 UDP-glucose/GDP-mannose dehydrogenase VA249_24880 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal VA249_24880 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily VA249_24880 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation VA249_24880 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal VA249_24880 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type VA249_24890 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain VA249_24890 IPR022712 Beta-Casp domain VA249_24890 IPR001279 Metallo-beta-lactamase VA249_24890 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VA249_24900 IPR000715 Glycosyl transferase, family 4 VA249_24900 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase VA249_24930 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related VA249_24930 IPR014710 RmlC-like jelly roll fold VA249_24930 IPR011051 RmlC-like cupin domain superfamily VA249_24940 IPR005913 dTDP-4-dehydrorhamnose reductase family VA249_24940 IPR036291 NAD(P)-binding domain superfamily VA249_24940 IPR029903 RmlD-like substrate binding domain VA249_24950 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form VA249_24950 IPR005835 Nucleotidyl transferase domain VA249_24950 IPR029044 Nucleotide-diphospho-sugar transferases VA249_24960 IPR005888 dTDP-glucose 4,6-dehydratase VA249_24960 IPR016040 NAD(P)-binding domain VA249_24960 IPR036291 NAD(P)-binding domain superfamily VA249_24970 IPR029044 Nucleotide-diphospho-sugar transferases VA249_24970 IPR001173 Glycosyltransferase 2-like VA249_25070 IPR038717 Tc1-like transposase, DDE domain VA249_25080 IPR015421 Pyridoxal phosphate-dependent transferase, major domain VA249_25080 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 VA249_25080 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase VA249_25080 IPR015424 Pyridoxal phosphate-dependent transferase VA249_25090 IPR001451 Hexapeptide repeat VA249_25090 IPR011004 Trimeric LpxA-like superfamily VA249_25100 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily VA249_25100 IPR036291 NAD(P)-binding domain superfamily VA249_25100 IPR017476 UDP-glucose/GDP-mannose dehydrogenase VA249_25100 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal VA249_25100 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily VA249_25100 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation VA249_25100 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal VA249_25100 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase VA249_25110 IPR000683 Oxidoreductase, N-terminal VA249_25110 IPR004104 Oxidoreductase, C-terminal VA249_25110 IPR036291 NAD(P)-binding domain superfamily VA249_25170 IPR023373 YmcC-like superfamily VA249_25170 IPR021308 Group 4 capsule polysaccharide formation lipoprotein GfcB VA249_25190 IPR010344 Exopolysaccharide biosynthesis protein YbjH VA249_25200 IPR001509 NAD-dependent epimerase/dehydratase VA249_25200 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase VA249_25200 IPR036291 NAD(P)-binding domain superfamily VA249_25230 IPR004960 Bacterial lipid A biosynthesis acyltransferase VA249_25230 IPR011921 Lipid A biosynthesis myristoyltransferase VA249_25240 IPR002201 Glycosyl transferase, family 9 VA249_25240 IPR011910 ADP-heptose--LPS heptosyltransferase 2 VA249_25250 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal VA249_25250 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily VA249_25250 IPR039901 3-deoxy-D-manno-octulosonic acid transferase VA249_25270 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain VA249_25270 IPR001296 Glycosyl transferase, family 1 VA249_25290 IPR002347 Short-chain dehydrogenase/reductase SDR VA249_25290 IPR036291 NAD(P)-binding domain superfamily VA249_25300 IPR029044 Nucleotide-diphospho-sugar transferases VA249_25300 IPR003329 Acylneuraminate cytidylyltransferase VA249_25310 IPR000683 Oxidoreductase, N-terminal VA249_25310 IPR036291 NAD(P)-binding domain superfamily VA249_25310 IPR004104 Oxidoreductase, C-terminal VA249_25320 IPR005835 Nucleotidyl transferase domain VA249_25320 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial VA249_25320 IPR011831 Glucose-1-phosphate adenylyltransferase VA249_25320 IPR005836 ADP-glucose pyrophosphorylase, conserved site VA249_25320 IPR011004 Trimeric LpxA-like superfamily VA249_25320 IPR029044 Nucleotide-diphospho-sugar transferases VA249_25340 IPR020007 N-acetylneuraminate synthase VA249_25340 IPR013785 Aldolase-type TIM barrel VA249_25340 IPR036732 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal domain superfamily VA249_25340 IPR006190 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal VA249_25340 IPR013132 N-acetylneuraminic acid synthase, N-terminal VA249_25340 IPR013974 SAF domain VA249_25350 IPR020004 UDP-N-acetylglucosamine 2-epimerase,UDP-hydrolysing VA249_25350 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like VA249_25350 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain VA249_25360 IPR015421 Pyridoxal phosphate-dependent transferase, major domain VA249_25360 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 VA249_25360 IPR015424 Pyridoxal phosphate-dependent transferase VA249_25360 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase VA249_25370 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VA249_25370 IPR036291 NAD(P)-binding domain superfamily VA249_25370 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain VA249_25380 IPR000719 Protein kinase domain VA249_25380 IPR011009 Protein kinase-like domain superfamily VA249_25380 IPR022826 3-deoxy-D-manno-octulosonic acid kinase VA249_25390 IPR036945 Diacylglycerol kinase (DAGK) superfamily VA249_25390 IPR033718 Diacylglycerol kinase, prokaryotic VA249_25390 IPR000829 DAGK family VA249_25400 IPR002201 Glycosyl transferase, family 9 VA249_25410 IPR001173 Glycosyltransferase 2-like VA249_25410 IPR029044 Nucleotide-diphospho-sugar transferases VA249_25420 IPR001296 Glycosyl transferase, family 1 VA249_25420 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain VA249_25420 IPR023881 N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA VA249_25430 IPR004821 Cytidyltransferase-like domain VA249_25430 IPR001980 Phosphopantetheine adenylyltransferase VA249_25430 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VA249_25440 IPR006598 Glycosyl transferase CAP10 domain VA249_25460 IPR000214 Zinc finger, DNA glycosylase/AP lyase-type VA249_25460 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain VA249_25460 IPR020629 Formamidopyrimidine-DNA glycosylase VA249_25460 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site VA249_25460 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding VA249_25460 IPR035937 MutM-like, N-terminal VA249_25460 IPR010979 Ribosomal protein S13-like, H2TH VA249_25460 IPR010663 Zinc finger, FPG/IleRS-type VA249_25480 IPR001705 Ribosomal protein L33 VA249_25480 IPR038584 Ribosomal protein L33 superfamily VA249_25480 IPR018264 Ribosomal protein L33, conserved site VA249_25480 IPR011332 Zinc-binding ribosomal protein VA249_25490 IPR026569 Ribosomal protein L28/L24 VA249_25490 IPR001383 Ribosomal protein L28 VA249_25490 IPR034704 L28p-like VA249_25490 IPR037147 Ribosomal protein L28/L24 superfamily VA249_25500 IPR020891 Uncharacterised protein family UPF0758, conserved site VA249_25500 IPR037518 MPN domain VA249_25500 IPR025657 RadC-like JAB domain VA249_25500 IPR010994 RuvA domain 2-like VA249_25500 IPR001405 Uncharacterised protein family UPF0758 VA249_25510 IPR003382 Flavoprotein VA249_25510 IPR036551 Flavin prenyltransferase-like VA249_25510 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal VA249_25510 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC VA249_25510 IPR035929 CoaB-like superfamily VA249_25520 IPR023769 Nucleoid occlusion factor SlmA VA249_25520 IPR001647 DNA-binding HTH domain, TetR-type VA249_25520 IPR009057 Homeobox-like domain superfamily VA249_25520 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily VA249_25530 IPR004960 Bacterial lipid A biosynthesis acyltransferase VA249_25530 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase VA249_25540 IPR023031 Orotate phosphoribosyltransferase VA249_25540 IPR004467 Orotate phosphoribosyl transferase domain VA249_25540 IPR029057 Phosphoribosyltransferase-like VA249_25540 IPR000836 Phosphoribosyltransferase domain VA249_25550 IPR002381 Ribonuclease PH, bacterial-type VA249_25550 IPR018336 Ribonuclease PH, conserved site VA249_25550 IPR020568 Ribosomal protein S5 domain 2-type fold VA249_25550 IPR027408 PNPase/RNase PH domain superfamily VA249_25550 IPR036345 Exoribonuclease, PH domain 2 superfamily VA249_25550 IPR015847 Exoribonuclease, phosphorolytic domain 2 VA249_25550 IPR001247 Exoribonuclease, phosphorolytic domain 1 VA249_25560 IPR013527 YicC-like, N-terminal VA249_25560 IPR013551 Domain of unknown function DUF1732 VA249_25560 IPR005229 Conserved hypothetical protein CHP00255 VA249_25580 IPR000620 EamA domain VA249_25600 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal VA249_25600 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_25600 IPR017871 ABC transporter, conserved site VA249_25600 IPR003439 ABC transporter-like VA249_25600 IPR003593 AAA+ ATPase domain VA249_25610 IPR017871 ABC transporter, conserved site VA249_25610 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_25610 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal VA249_25610 IPR003439 ABC transporter-like VA249_25610 IPR003593 AAA+ ATPase domain VA249_25620 IPR000914 Solute-binding protein family 5 domain VA249_25620 IPR023765 Solute-binding protein family 5, conserved site VA249_25620 IPR039424 Solute-binding protein family 5 VA249_25620 IPR030678 Peptide/nickel binding protein, MppA-type VA249_25630 IPR035906 MetI-like superfamily VA249_25630 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VA249_25630 IPR025966 Oligopeptide transport permease C-like, N-terminal domain VA249_25640 IPR035906 MetI-like superfamily VA249_25640 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VA249_25650 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily VA249_25650 IPR010101 TonB-dependent vitamin B12 transporter BtuB VA249_25650 IPR000531 TonB-dependent receptor-like, beta-barrel VA249_25650 IPR039426 Vitamin B12 transporter BtuB-like VA249_25650 IPR012910 TonB-dependent receptor, plug domain VA249_25650 IPR037066 TonB-dependent receptor, plug domain superfamily VA249_25650 IPR010917 TonB-dependent receptor, conserved site VA249_25650 IPR010916 TonB box, conserved site VA249_25680 IPR002898 MotA/TolQ/ExbB proton channel VA249_25690 IPR003400 Biopolymer transport protein ExbD/TolR VA249_25730 IPR008145 Guanylate kinase/L-type calcium channel beta subunit VA249_25730 IPR008144 Guanylate kinase-like domain VA249_25730 IPR017665 Guanylate kinase VA249_25730 IPR020590 Guanylate kinase, conserved site VA249_25730 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_25740 IPR003716 DNA-directed RNA polymerase, omega subunit VA249_25740 IPR006110 RNA polymerase, subunit omega/K/RPB6 VA249_25740 IPR012293 RNA polymerase subunit, RPB6/omega VA249_25740 IPR036161 RPB6/omega subunit-like superfamily VA249_25750 IPR003607 HD/PDEase domain VA249_25750 IPR002912 ACT domain VA249_25750 IPR012675 Beta-grasp domain superfamily VA249_25750 IPR004811 RelA/SpoT family VA249_25750 IPR007685 RelA/SpoT VA249_25750 IPR004095 TGS VA249_25750 IPR012676 TGS-like VA249_25750 IPR033655 RelA, TGS domain VA249_25760 IPR033671 tRNA (guanosine(18)-2'-O)-methyltransferase VA249_25760 IPR029028 Alpha/beta knot methyltransferases VA249_25760 IPR022724 RNA methyltransferase, SpoU/TrmH type, C-terminal VA249_25760 IPR001537 tRNA/rRNA methyltransferase, SpoU type VA249_25760 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VA249_25770 IPR004609 ATP-dependent DNA helicase RecG VA249_25770 IPR011545 DEAD/DEAH box helicase domain VA249_25770 IPR014001 Helicase superfamily 1/2, ATP-binding domain VA249_25770 IPR001650 Helicase, C-terminal VA249_25770 IPR012340 Nucleic acid-binding, OB-fold VA249_25770 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_25770 IPR033454 RecG, wedge domain VA249_25780 IPR011042 Six-bladed beta-propeller, TolB-like VA249_25780 IPR029058 Alpha/Beta hydrolase fold VA249_25780 IPR011659 WD40-like Beta Propeller VA249_25780 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain VA249_25790 IPR006043 Xanthine/uracil/vitamin C permease VA249_25790 IPR006042 Xanthine/uracil permease VA249_25800 IPR003594 Histidine kinase/HSP90-like ATPase VA249_25800 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily VA249_25800 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VA249_25800 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain VA249_25800 IPR005467 Histidine kinase domain VA249_25800 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VA249_25800 IPR003660 HAMP domain VA249_25810 IPR039420 Transcriptional regulatory protein WalR-like VA249_25810 IPR001789 Signal transduction response regulator, receiver domain VA249_25810 IPR016032 Signal transduction response regulator, C-terminal effector VA249_25810 IPR001867 OmpR/PhoB-type DNA-binding domain VA249_25810 IPR011006 CheY-like superfamily VA249_25810 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_25820 IPR006358 Transcription elongation factor GreB VA249_25820 IPR028624 Transcription elongation factor GreA/GreB VA249_25820 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily VA249_25820 IPR018151 Transcription elongation factor, GreA/GreB, conserved site VA249_25820 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal VA249_25820 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily VA249_25820 IPR023459 Transcription elongation factor GreA/GreB family VA249_25820 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal VA249_25830 IPR009057 Homeobox-like domain superfamily VA249_25830 IPR038965 Transposase InsF-like VA249_25850 IPR022967 RNA-binding domain, S1 VA249_25850 IPR037027 YqgF/RNase H-like domain superfamily VA249_25850 IPR003029 S1 domain VA249_25850 IPR023323 Tex-like domain superfamily VA249_25850 IPR023319 Tex-like protein, HTH domain superfamily VA249_25850 IPR010994 RuvA domain 2-like VA249_25850 IPR012337 Ribonuclease H-like superfamily VA249_25850 IPR032639 Tex protein, YqgF-like domain VA249_25850 IPR012340 Nucleic acid-binding, OB-fold VA249_25850 IPR006641 YqgF/RNase H-like domain VA249_25850 IPR041692 HHH domain 9 VA249_25850 IPR018974 Tex-like protein, N-terminal VA249_25870 IPR029058 Alpha/Beta hydrolase fold VA249_25870 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase VA249_25870 IPR000073 Alpha/beta hydrolase fold-1 VA249_25890 IPR029057 Phosphoribosyltransferase-like VA249_25890 IPR005222 Competence protein ComF VA249_25890 IPR000836 Phosphoribosyltransferase domain VA249_25900 IPR000361 FeS cluster biogenesis VA249_25900 IPR017726 Fe/S biogenesis protein NfuA VA249_25900 IPR034904 Fe-S cluster assembly domain superfamily VA249_25900 IPR035903 HesB-like domain superfamily VA249_25900 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal VA249_25910 IPR000086 NUDIX hydrolase domain VA249_25910 IPR020084 NUDIX hydrolase, conserved site VA249_25910 IPR015797 NUDIX hydrolase-like domain superfamily VA249_25920 IPR020583 Inositol monophosphatase, metal-binding site VA249_25920 IPR000760 Inositol monophosphatase-like VA249_25920 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ VA249_25920 IPR020550 Inositol monophosphatase, conserved site VA249_25930 IPR022792 Type II secretion system, protein N VA249_25930 IPR000645 Type II secretion system protein N, conserved site VA249_25940 IPR007690 Type II secretion system, protein M VA249_25940 IPR023229 Type II secretion system protein M, periplasmic domain superfamily VA249_25950 IPR024230 GspL, cytoplasmic actin-ATPase-like domain VA249_25950 IPR025691 GspL periplasmic domain VA249_25950 IPR007812 Type II secretion system protein L VA249_25960 IPR005628 General secretion pathway protein K VA249_25960 IPR038072 GspK, central domain superfamily VA249_25970 IPR010055 Type II secretion system protein J VA249_25970 IPR012902 Prokaryotic N-terminal methylation site VA249_25980 IPR010052 Type II secretion system protein I VA249_25980 IPR003413 Type II secretion system protein I domain VA249_25980 IPR012902 Prokaryotic N-terminal methylation site VA249_25990 IPR012902 Prokaryotic N-terminal methylation site VA249_25990 IPR022346 General secretion pathway, GspH VA249_25990 IPR002416 Type II secretion system protein H VA249_26000 IPR010054 General secretion pathway protein G VA249_26000 IPR013545 Type II secretion system protein G VA249_26000 IPR012902 Prokaryotic N-terminal methylation site VA249_26000 IPR000983 Bacterial general secretion pathway protein G-type pilin VA249_26010 IPR018076 Type II secretion system F domain VA249_26010 IPR001992 Type II secretion system conserved site VA249_26010 IPR042094 Type II secretion system F domain superfamily VA249_26010 IPR003004 GspF/PilC family VA249_26010 IPR011850 General secretion pathway protein F VA249_26020 IPR003593 AAA+ ATPase domain VA249_26020 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_26020 IPR001482 Type II/IV secretion system protein VA249_26020 IPR013369 Type II secretion system GspE VA249_26020 IPR042181 Type II secretion system, protein E, N-terminal VA249_26020 IPR037257 General secretory system II, protein E, N-terminal superfamily VA249_26030 IPR004845 Type II secretion system GspD, conserved site VA249_26030 IPR001775 GspD/PilQ family VA249_26030 IPR005644 NolW-like VA249_26030 IPR038591 NolW-like superfamily VA249_26030 IPR004846 Type II/III secretion system VA249_26030 IPR013356 Type II secretion system GspD VA249_26040 IPR001639 Type II secretion system protein C VA249_26040 IPR036034 PDZ superfamily VA249_26040 IPR024961 Type II secretion system protein C, N-terminal VA249_26050 IPR025708 Heat shock protein 15 VA249_26050 IPR002942 RNA-binding S4 domain VA249_26050 IPR036986 RNA-binding S4 domain superfamily VA249_26060 IPR000397 Heat shock protein Hsp33 VA249_26060 IPR016154 Heat shock protein Hsp33, C-terminal VA249_26060 IPR016153 Heat shock protein Hsp33, N-terminal VA249_26060 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily VA249_26070 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal VA249_26070 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising VA249_26070 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal VA249_26070 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site VA249_26090 IPR012660 Thioesterase, putative VA249_26090 IPR029069 HotDog domain superfamily VA249_26090 IPR016181 Acyl-CoA N-acyltransferase VA249_26090 IPR000182 GNAT domain VA249_26100 IPR003732 D-aminoacyl-tRNA deacylase DTD VA249_26100 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily VA249_26110 IPR017039 Virulence factor BrkB VA249_26110 IPR023679 Uncharacterised protein family UPF0761, bacterial VA249_26140 IPR000795 Transcription factor, GTP-binding domain VA249_26140 IPR005225 Small GTP-binding protein domain VA249_26140 IPR042116 GTP-binding protein TypA/BipA, C-terminal VA249_26140 IPR009000 Translation protein, beta-barrel domain superfamily VA249_26140 IPR006298 GTP-binding protein TypA VA249_26140 IPR031157 Tr-type G domain, conserved site VA249_26140 IPR004161 Translation elongation factor EFTu-like, domain 2 VA249_26140 IPR000640 Elongation factor EFG, domain V-like VA249_26140 IPR035647 EF-G domain III/V-like VA249_26140 IPR035651 BipA, domain V VA249_26140 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_26150 IPR027302 Glutamine synthetase, N-terminal conserved site VA249_26150 IPR001637 Glutamine synthetase class-I, adenylation site VA249_26150 IPR004809 Glutamine synthetase type I VA249_26150 IPR027303 Glutamine synthetase, glycine-rich site VA249_26150 IPR008146 Glutamine synthetase, catalytic domain VA249_26150 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain VA249_26150 IPR036651 Glutamine synthetase, N-terminal domain superfamily VA249_26150 IPR008147 Glutamine synthetase, beta-Grasp domain VA249_26170 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VA249_26170 IPR035965 PAS domain superfamily VA249_26170 IPR000014 PAS domain VA249_26170 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily VA249_26170 IPR013767 PAS fold VA249_26170 IPR005467 Histidine kinase domain VA249_26170 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VA249_26170 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain VA249_26170 IPR003594 Histidine kinase/HSP90-like ATPase VA249_26180 IPR010114 DNA-binding transcriptional regulator NtrC VA249_26180 IPR025944 Sigma-54 interaction domain, conserved site VA249_26180 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VA249_26180 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VA249_26180 IPR002078 RNA polymerase sigma factor 54 interaction domain VA249_26180 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_26180 IPR002197 DNA binding HTH domain, Fis-type VA249_26180 IPR009057 Homeobox-like domain superfamily VA249_26180 IPR011006 CheY-like superfamily VA249_26180 IPR003593 AAA+ ATPase domain VA249_26180 IPR001789 Signal transduction response regulator, receiver domain VA249_26200 IPR035919 EAL domain superfamily VA249_26200 IPR001633 EAL domain VA249_26200 IPR000160 GGDEF domain VA249_26200 IPR029787 Nucleotide cyclase VA249_26200 IPR005330 MHYT domain VA249_26210 IPR032466 Metal-dependent hydrolase VA249_26210 IPR006330 Adenosine/adenine deaminase VA249_26210 IPR001365 Adenosine/AMP deaminase domain VA249_26210 IPR028893 Adenosine deaminase VA249_26220 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN VA249_26220 IPR034505 Anaerobic coproporphyrinogen-III oxidase VA249_26220 IPR006638 Elp3/MiaB/NifB VA249_26220 IPR010723 HemN, C-terminal VA249_26220 IPR007197 Radical SAM VA249_26220 IPR023404 Radical SAM, alpha/beta horseshoe VA249_26230 IPR019617 Domain of unknown function DUF2489 VA249_26240 IPR007336 Der GTPase activator VA249_26260 IPR024167 Cytochrome c4-like VA249_26260 IPR036909 Cytochrome c-like domain superfamily VA249_26260 IPR009056 Cytochrome c-like domain VA249_26270 IPR030393 EngB-type guanine nucleotide-binding (G) domain VA249_26270 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC VA249_26270 IPR006073 GTP binding domain VA249_26270 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_26280 IPR036397 Ribonuclease H superfamily VA249_26280 IPR012337 Ribonuclease H-like superfamily VA249_26280 IPR029060 PIN-like domain superfamily VA249_26280 IPR008918 Helix-hairpin-helix motif, class 2 VA249_26280 IPR002298 DNA polymerase A VA249_26280 IPR036279 5'-3' exonuclease, C-terminal domain superfamily VA249_26280 IPR020045 DNA polymerase I-like, H3TH domain VA249_26280 IPR001098 DNA-directed DNA polymerase, family A, palm domain VA249_26280 IPR019760 DNA-directed DNA polymerase, family A, conserved site VA249_26280 IPR002421 5'-3' exonuclease, N-terminal VA249_26280 IPR002562 3'-5' exonuclease domain VA249_26280 IPR018320 DNA polymerase 1 VA249_26280 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal VA249_26300 IPR001731 Delta-aminolevulinic acid dehydratase VA249_26300 IPR030656 Delta-aminolevulinic acid dehydratase, active site VA249_26300 IPR013785 Aldolase-type TIM barrel VA249_26310 IPR018228 Deoxyribonuclease, TatD-related, conserved site VA249_26310 IPR015991 Uncharacterised hydrolase TatD-type VA249_26310 IPR032466 Metal-dependent hydrolase VA249_26310 IPR001130 TatD family VA249_26320 IPR019820 Sec-independent periplasmic protein translocase, conserved site VA249_26320 IPR002033 Sec-independent periplasmic protein translocase TatC VA249_26330 IPR018448 Twin-arginine translocation protein TatB VA249_26330 IPR003369 Sec-independent protein translocase protein TatA/B/E VA249_26340 IPR003369 Sec-independent protein translocase protein TatA/B/E VA249_26340 IPR006312 Sec-independent protein translocase protein TatA/E VA249_26350 IPR004147 UbiB domain VA249_26350 IPR010232 Probable protein kinase UbiB VA249_26350 IPR011009 Protein kinase-like domain superfamily VA249_26360 IPR003033 SCP2 sterol-binding domain VA249_26360 IPR036527 SCP2 sterol-binding domain superfamily VA249_26360 IPR038989 Ubiquinone biosynthesis protein UbiJ VA249_26370 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VA249_26370 IPR004033 UbiE/COQ5 methyltransferase VA249_26370 IPR023576 UbiE/COQ5 methyltransferase, conserved site VA249_26380 IPR003798 DNA recombination RmuC VA249_26400 IPR035965 PAS domain superfamily VA249_26400 IPR029787 Nucleotide cyclase VA249_26400 IPR005330 MHYT domain VA249_26400 IPR000160 GGDEF domain VA249_26400 IPR035919 EAL domain superfamily VA249_26400 IPR001633 EAL domain VA249_26410 IPR004792 3-Dehydro-bile acid delta(4,6)-reductase-like VA249_26410 IPR023166 HI0933-like insert domain superfamily VA249_26410 IPR036188 FAD/NAD(P)-binding domain superfamily VA249_26420 IPR019598 Universal stress protein B VA249_26430 IPR009040 Ferritin-like diiron domain VA249_26430 IPR041719 Ferritin, prokaryotic-type VA249_26430 IPR008331 Ferritin/DPS protein domain VA249_26430 IPR009078 Ferritin-like superfamily VA249_26430 IPR001519 Ferritin VA249_26430 IPR012347 Ferritin-like VA249_26440 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VA249_26440 IPR006015 Universal stress protein A family VA249_26440 IPR006016 UspA VA249_26450 IPR004779 Carboxylate/Amino Acid/Amine Transporter VA249_26450 IPR000620 EamA domain VA249_26470 IPR007536 Ribosomal RNA small subunit methyltransferase J VA249_26470 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VA249_26480 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_26480 IPR019885 Transcription regulator HTH, AsnC-type, conserved site VA249_26480 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VA249_26480 IPR019888 Transcription regulator AsnC-type VA249_26480 IPR011008 Dimeric alpha-beta barrel VA249_26480 IPR011991 ArsR-like helix-turn-helix domain VA249_26480 IPR036390 Winged helix DNA-binding domain superfamily VA249_26480 IPR000485 AsnC-type HTH domain VA249_26490 IPR001567 Peptidase M3A/M3B catalytic domain VA249_26490 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 VA249_26500 IPR002052 DNA methylase, N-6 adenine-specific, conserved site VA249_26500 IPR007473 Ribosomal RNA large subunit methyltransferase J VA249_26500 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VA249_26510 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily VA249_26510 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VA249_26510 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site VA249_26510 IPR006322 Glutathione reductase, eukaryote/bacterial VA249_26510 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I VA249_26510 IPR023753 FAD/NAD(P)-binding domain VA249_26510 IPR036188 FAD/NAD(P)-binding domain superfamily VA249_26520 IPR000887 KDPG/KHG aldolase VA249_26520 IPR031338 KDPG/KHG aldolase, active site 2 VA249_26520 IPR031337 KDPG/KHG aldolase, active site 1 VA249_26520 IPR013785 Aldolase-type TIM barrel VA249_26530 IPR003474 Gluconate transporter VA249_26540 IPR031322 Shikimate kinase/gluconokinase VA249_26540 IPR006001 Carbohydrate kinase, thermoresistant glucokinase VA249_26540 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_26550 IPR004786 6-phosphogluconate dehydratase VA249_26550 IPR042096 Dihydroxy-acid dehydratase, C-terminal VA249_26550 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase VA249_26550 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site VA249_26550 IPR037237 IlvD/EDD, N-terminal domain VA249_26560 IPR000390 Small multidrug resistance protein family VA249_26560 IPR023737 Spermidine export protein MdtI VA249_26570 IPR000390 Small multidrug resistance protein family VA249_26570 IPR023740 Spermidine export protein MdtJ VA249_26580 IPR005119 LysR, substrate-binding VA249_26580 IPR036390 Winged helix DNA-binding domain superfamily VA249_26580 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_26580 IPR000847 Transcription regulator HTH, LysR VA249_26590 IPR000843 LacI-type HTH domain VA249_26590 IPR010982 Lambda repressor-like, DNA-binding domain superfamily VA249_26590 IPR001761 Periplasmic binding protein/LacI sugar binding domain VA249_26590 IPR028082 Periplasmic binding protein-like I VA249_26600 IPR011009 Protein kinase-like domain superfamily VA249_26600 IPR000719 Protein kinase domain VA249_26600 IPR008271 Serine/threonine-protein kinase, active site VA249_26670 IPR035906 MetI-like superfamily VA249_26670 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VA249_26670 IPR025966 Oligopeptide transport permease C-like, N-terminal domain VA249_26680 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VA249_26680 IPR035906 MetI-like superfamily VA249_26690 IPR030678 Peptide/nickel binding protein, MppA-type VA249_26690 IPR039424 Solute-binding protein family 5 VA249_26690 IPR000914 Solute-binding protein family 5 domain VA249_26700 IPR003593 AAA+ ATPase domain VA249_26700 IPR003439 ABC transporter-like VA249_26700 IPR017871 ABC transporter, conserved site VA249_26700 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal VA249_26700 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_26720 IPR009056 Cytochrome c-like domain VA249_26720 IPR036909 Cytochrome c-like domain superfamily VA249_26720 IPR002323 Cytochrome c, class IE VA249_26730 IPR034739 UvrD/AddA helicase, N-terminal VA249_26730 IPR014016 UvrD-like helicase, ATP-binding domain VA249_26730 IPR005752 ATP-dependent DNA helicase Rep VA249_26730 IPR000212 DNA helicase, UvrD/REP type VA249_26730 IPR014017 UvrD-like DNA helicase, C-terminal VA249_26730 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_26730 IPR013986 DExx box DNA helicase domain superfamily VA249_26740 IPR009057 Homeobox-like domain superfamily VA249_26740 IPR001647 DNA-binding HTH domain, TetR-type VA249_26740 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily VA249_26740 IPR013570 Transcription regulator YsiA, C-terminal VA249_26750 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VA249_26750 IPR006143 RND efflux pump, membrane fusion protein VA249_26760 IPR001036 Acriflavin resistance protein VA249_26760 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VA249_26770 IPR007475 Ubiquinone biosynthesis accessory factor UbiK VA249_26780 IPR013023 Ketol-acid reductoisomerase VA249_26780 IPR000506 Ketol-acid reductoisomerase, C-terminal VA249_26780 IPR013116 Ketol-acid reductoisomerase, N-terminal VA249_26780 IPR036291 NAD(P)-binding domain superfamily VA249_26780 IPR013328 6-phosphogluconate dehydrogenase, domain 2 VA249_26780 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily VA249_26790 IPR036390 Winged helix DNA-binding domain superfamily VA249_26790 IPR000847 Transcription regulator HTH, LysR VA249_26790 IPR005119 LysR, substrate-binding VA249_26790 IPR037404 HTH-type transcriptional activator IlvY, PBP2 domain VA249_26790 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_26810 IPR001451 Hexapeptide repeat VA249_26810 IPR011004 Trimeric LpxA-like superfamily VA249_26820 IPR009962 Protein of unknown function DUF1488 VA249_26820 IPR036692 Shew3726-like superfamily VA249_26830 IPR036291 NAD(P)-binding domain superfamily VA249_26830 IPR041121 SDH, C-terminal VA249_26830 IPR011342 Shikimate dehydrogenase VA249_26830 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal VA249_26830 IPR022893 Shikimate dehydrogenase family VA249_26830 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase VA249_26840 IPR001260 Coproporphyrinogen III oxidase, aerobic VA249_26840 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily VA249_26840 IPR018375 Coproporphyrinogen III oxidase, conserved site VA249_26850 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily VA249_26850 IPR023535 Threonylcarbamoyl-AMP synthase VA249_26850 IPR006070 YrdC-like domain VA249_26860 IPR033747 Class I PurE VA249_26860 IPR000031 PurE domain VA249_26860 IPR024694 PurE, prokaryotic type VA249_26860 IPR035893 PurE domain superfamily VA249_26870 IPR040686 Phosphoribosylaminoimidazole carboxylase, C-terminal domain VA249_26870 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit VA249_26870 IPR011054 Rudiment single hybrid motif VA249_26870 IPR013815 ATP-grasp fold, subdomain 1 VA249_26870 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type VA249_26870 IPR016185 Pre-ATP-grasp domain superfamily VA249_26870 IPR011761 ATP-grasp fold VA249_26900 IPR000380 DNA topoisomerase, type IA VA249_26900 IPR013498 DNA topoisomerase, type IA, zn finger VA249_26910 IPR007456 Smg VA249_26920 IPR041614 DprA, winged helix domain VA249_26920 IPR003488 DNA recombination-mediator protein A VA249_26920 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_26940 IPR023635 Peptide deformylase VA249_26940 IPR036821 Peptide deformylase superfamily VA249_26950 IPR005794 Methionyl-tRNA formyltransferase VA249_26950 IPR005793 Formyl transferase, C-terminal VA249_26950 IPR037022 Formyl transferase, C-terminal domain superfamily VA249_26950 IPR002376 Formyl transferase, N-terminal VA249_26950 IPR036477 Formyl transferase, N-terminal domain superfamily VA249_26950 IPR011034 Formyl transferase-like, C-terminal domain superfamily VA249_26950 IPR001555 Phosphoribosylglycinamide formyltransferase, active site VA249_26950 IPR041711 Methionyl-tRNA formyltransferase, N-terminal domain VA249_26960 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VA249_26960 IPR023267 RNA (C5-cytosine) methyltransferase VA249_26960 IPR004573 rRNA small subunit methyltransferase B VA249_26960 IPR035926 NusB-like superfamily VA249_26960 IPR006027 NusB/RsmB/TIM44 VA249_26960 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type VA249_26960 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site VA249_26970 IPR036291 NAD(P)-binding domain superfamily VA249_26970 IPR006037 Regulator of K+ conductance, C-terminal VA249_26970 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily VA249_26970 IPR003148 Regulator of K+ conductance, N-terminal VA249_26970 IPR006036 Potassium uptake protein TrkA VA249_26980 IPR003445 Cation transporter VA249_26980 IPR004772 TrkH potassium transport family VA249_27000 IPR004254 AdipoR/Haemolysin-III-related VA249_27000 IPR005744 Hly-III VA249_27010 IPR014752 Arrestin, C-terminal VA249_27010 IPR014756 Immunoglobulin E-set VA249_27010 IPR009776 Sporulation stage 0, protein M VA249_27030 IPR009383 Protein of unknown function DUF1040 VA249_27030 IPR038134 YihD-like superfamily VA249_27040 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VA249_27040 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VA249_27040 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG VA249_27040 IPR032879 FixG, C-terminal immunoglobulin-like domain VA249_27040 IPR013783 Immunoglobulin-like fold VA249_27050 IPR002575 Aminoglycoside phosphotransferase VA249_27050 IPR011009 Protein kinase-like domain superfamily VA249_27050 IPR032882 SrkA/RdoA protein kinase VA249_27060 IPR036249 Thioredoxin-like superfamily VA249_27060 IPR013766 Thioredoxin domain VA249_27060 IPR001853 DSBA-like thioredoxin domain VA249_27060 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL VA249_27070 IPR002123 Phospholipid/glycerol acyltransferase VA249_27090 IPR003593 AAA+ ATPase domain VA249_27090 IPR001208 MCM domain VA249_27090 IPR004482 Mg chelatase-related protein VA249_27090 IPR025158 Mg chelatase-related protein, C-terminal domain VA249_27090 IPR000523 Magnesium chelatase ChlI domain VA249_27090 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_27090 IPR020568 Ribosomal protein S5 domain 2-type fold VA249_27090 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VA249_27100 IPR000399 TPP-binding enzyme, conserved site VA249_27100 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding VA249_27100 IPR012000 Thiamine pyrophosphate enzyme, central domain VA249_27100 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain VA249_27100 IPR029035 DHS-like NAD/FAD-binding domain superfamily VA249_27100 IPR029061 Thiamin diphosphate-binding fold VA249_27100 IPR039368 Acetolactate synthase large subunit, TPP binding domain VA249_27100 IPR012846 Acetolactate synthase, large subunit, biosynthetic VA249_27110 IPR002912 ACT domain VA249_27120 IPR033939 Branched-chain aminotransferase VA249_27120 IPR018300 Aminotransferase, class IV, conserved site VA249_27120 IPR036038 Aminotransferase-like, PLP-dependent enzymes VA249_27120 IPR005785 Branched-chain amino acid aminotransferase I VA249_27120 IPR001544 Aminotransferase class IV VA249_27130 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase VA249_27130 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site VA249_27130 IPR037237 IlvD/EDD, N-terminal domain VA249_27130 IPR004404 Dihydroxy-acid dehydratase VA249_27130 IPR042096 Dihydroxy-acid dehydratase, C-terminal VA249_27140 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme VA249_27140 IPR005787 Threonine dehydratase, biosynthetic VA249_27140 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site VA249_27140 IPR001926 Pyridoxal-phosphate dependent enzyme VA249_27140 IPR001721 Threonine dehydratase, ACT-like domain VA249_27140 IPR038110 Threonine dehydratase, ACT-like domain superfamily VA249_27150 IPR005119 LysR, substrate-binding VA249_27150 IPR000847 Transcription regulator HTH, LysR VA249_27150 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_27150 IPR036390 Winged helix DNA-binding domain superfamily VA249_27160 IPR020846 Major facilitator superfamily domain VA249_27160 IPR004812 Drug resistance transporter Bcr/CmlA subfamily VA249_27160 IPR011701 Major facilitator superfamily VA249_27160 IPR036259 MFS transporter superfamily VA249_27170 IPR038009 GlmU, C-terminal LbH domain VA249_27170 IPR001451 Hexapeptide repeat VA249_27170 IPR018357 Hexapeptide transferase, conserved site VA249_27170 IPR025877 MobA-like NTP transferase VA249_27170 IPR029044 Nucleotide-diphospho-sugar transferases VA249_27170 IPR011004 Trimeric LpxA-like superfamily VA249_27170 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase VA249_27180 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily VA249_27180 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit VA249_27180 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain VA249_27180 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal VA249_27180 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal VA249_27190 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_27190 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal VA249_27190 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain VA249_27190 IPR003593 AAA+ ATPase domain VA249_27190 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain VA249_27190 IPR005722 ATP synthase, F1 complex, beta subunit VA249_27190 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily VA249_27190 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site VA249_27200 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily VA249_27200 IPR000131 ATP synthase, F1 complex, gamma subunit VA249_27200 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site VA249_27210 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily VA249_27210 IPR000793 ATP synthase, alpha subunit, C-terminal VA249_27210 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily VA249_27210 IPR033732 ATP synthase, F1 complex, alpha subunit nucleotide-binding domain VA249_27210 IPR005294 ATP synthase, F1 complex, alpha subunit VA249_27210 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site VA249_27210 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain VA249_27210 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily VA249_27210 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain VA249_27210 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_27220 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily VA249_27220 IPR020781 ATPase, OSCP/delta subunit, conserved site VA249_27220 IPR000711 ATPase, OSCP/delta subunit VA249_27230 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast VA249_27230 IPR005864 ATP synthase, F0 complex, subunit b, bacterial VA249_27230 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily VA249_27240 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast VA249_27240 IPR000454 ATP synthase, F0 complex, subunit C VA249_27240 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site VA249_27240 IPR038662 F1F0 ATP synthase subunit C superfamily VA249_27240 IPR002379 V-ATPase proteolipid subunit C-like domain VA249_27240 IPR035921 F/V-ATP synthase subunit C superfamily VA249_27250 IPR000568 ATP synthase, F0 complex, subunit A VA249_27250 IPR023011 ATP synthase, F0 complex, subunit A, active site VA249_27250 IPR035908 ATP synthase, F0 complex, subunit A superfamily VA249_27260 IPR005598 ATP synthase protein I VA249_27270 IPR041468 ParB/Spo0J, HTH domain VA249_27270 IPR004437 ParB/RepB/Spo0J partition protein VA249_27270 IPR003115 ParB/Sulfiredoxin VA249_27270 IPR036086 ParB/Sulfiredoxin superfamily VA249_27280 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_27280 IPR025669 AAA domain VA249_27290 IPR003682 rRNA small subunit methyltransferase G VA249_27290 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VA249_27300 IPR036188 FAD/NAD(P)-binding domain superfamily VA249_27300 IPR026904 GidA associated domain 3 VA249_27300 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG VA249_27300 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related VA249_27300 IPR020595 MnmG-related, conserved site VA249_27310 IPR008254 Flavodoxin/nitric oxide synthase VA249_27310 IPR029039 Flavoprotein-like superfamily VA249_27320 IPR027368 tRNA modification GTPase MnmE domain 2 VA249_27320 IPR005225 Small GTP-binding protein domain VA249_27320 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_27320 IPR025867 MnmE, helical domain VA249_27320 IPR004520 tRNA modification GTPase MnmE VA249_27320 IPR018948 GTP-binding protein TrmE, N-terminal VA249_27320 IPR006073 GTP binding domain VA249_27320 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 VA249_27320 IPR031168 TrmE-type guanine nucleotide-binding domain VA249_27330 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 VA249_27330 IPR028053 Membrane insertase YidC, N-terminal VA249_27330 IPR038210 Membrane insertase YidC, periplasmic domain VA249_27330 IPR028055 Membrane insertase YidC/Oxa1, C-terminal VA249_27330 IPR038221 YidC, periplasmic domain superfamily VA249_27330 IPR019998 Membrane insertase YidC VA249_27340 IPR020568 Ribosomal protein S5 domain 2-type fold VA249_27340 IPR000100 Ribonuclease P VA249_27340 IPR020539 Ribonuclease P, conserved site VA249_27340 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VA249_27350 IPR020939 Ribosomal protein L34, conserved site VA249_27350 IPR000271 Ribosomal protein L34 VA249_27360 IPR003593 AAA+ ATPase domain VA249_27360 IPR017871 ABC transporter, conserved site VA249_27360 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_27360 IPR003439 ABC transporter-like VA249_27360 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type VA249_27370 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain VA249_27370 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VA249_27370 IPR035906 MetI-like superfamily VA249_27380 IPR001320 Ionotropic glutamate receptor VA249_27380 IPR018313 Solute-binding protein family 3, conserved site VA249_27380 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VA249_27390 IPR009057 Homeobox-like domain superfamily VA249_27390 IPR018060 DNA binding HTH domain, AraC-type VA249_27390 IPR018062 HTH domain AraC-type, conserved site VA249_27390 IPR028082 Periplasmic binding protein-like I VA249_27390 IPR020449 Transcription regulator HTH, AraC- type VA249_27400 IPR018484 Carbohydrate kinase, FGGY, N-terminal VA249_27400 IPR006000 Xylulokinase VA249_27400 IPR018483 Carbohydrate kinase, FGGY, conserved site VA249_27400 IPR018485 Carbohydrate kinase, FGGY, C-terminal VA249_27400 IPR000577 Carbohydrate kinase, FGGY VA249_27420 IPR000843 LacI-type HTH domain VA249_27420 IPR010982 Lambda repressor-like, DNA-binding domain superfamily VA249_27420 IPR028082 Periplasmic binding protein-like I VA249_27440 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VA249_27440 IPR035906 MetI-like superfamily VA249_27450 IPR035906 MetI-like superfamily VA249_27450 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VA249_27460 IPR017853 Glycoside hydrolase superfamily VA249_27460 IPR001360 Glycoside hydrolase family 1 VA249_27460 IPR018120 Glycoside hydrolase family 1, active site VA249_27460 IPR017736 Glycoside hydrolase, family 1, beta-glucosidase VA249_27460 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site VA249_27470 IPR013611 Transport-associated OB, type 2 VA249_27470 IPR017871 ABC transporter, conserved site VA249_27470 IPR008995 Molybdate/tungstate binding, C-terminal VA249_27470 IPR003593 AAA+ ATPase domain VA249_27470 IPR017922 sn-Glycerol-3-phosphate import ATP-binding protein UgpC VA249_27470 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_27470 IPR003439 ABC transporter-like VA249_27480 IPR000843 LacI-type HTH domain VA249_27480 IPR010982 Lambda repressor-like, DNA-binding domain superfamily VA249_27480 IPR028082 Periplasmic binding protein-like I VA249_27480 IPR023588 Transcription regulator HTH, PurR VA249_27500 IPR023765 Solute-binding protein family 5, conserved site VA249_27500 IPR000914 Solute-binding protein family 5 domain VA249_27500 IPR039424 Solute-binding protein family 5 VA249_27500 IPR030678 Peptide/nickel binding protein, MppA-type VA249_27510 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VA249_27510 IPR035906 MetI-like superfamily VA249_27520 IPR025966 Oligopeptide transport permease C-like, N-terminal domain VA249_27520 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VA249_27520 IPR035906 MetI-like superfamily VA249_27530 IPR003593 AAA+ ATPase domain VA249_27530 IPR003439 ABC transporter-like VA249_27530 IPR017871 ABC transporter, conserved site VA249_27530 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_27530 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal VA249_27540 IPR003593 AAA+ ATPase domain VA249_27540 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_27540 IPR003439 ABC transporter-like VA249_27540 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal VA249_27540 IPR017871 ABC transporter, conserved site VA249_27560 IPR028082 Periplasmic binding protein-like I VA249_27560 IPR010982 Lambda repressor-like, DNA-binding domain superfamily VA249_27560 IPR000843 LacI-type HTH domain VA249_27590 IPR029062 Class I glutamine amidotransferase-like VA249_27590 IPR009057 Homeobox-like domain superfamily VA249_27590 IPR018060 DNA binding HTH domain, AraC-type VA249_27590 IPR018062 HTH domain AraC-type, conserved site VA249_27590 IPR020449 Transcription regulator HTH, AraC- type VA249_27600 IPR026891 Fibronectin type III-like domain VA249_27600 IPR013783 Immunoglobulin-like fold VA249_27600 IPR019800 Glycoside hydrolase, family 3, active site VA249_27600 IPR001764 Glycoside hydrolase, family 3, N-terminal VA249_27600 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily VA249_27600 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily VA249_27600 IPR002772 Glycoside hydrolase family 3 C-terminal domain VA249_27600 IPR017853 Glycoside hydrolase superfamily VA249_27610 IPR002528 Multi antimicrobial extrusion protein VA249_27620 IPR041722 Alpha-keto acid binding periplasmic protein VA249_27620 IPR018389 TRAP transporter solute receptor DctP/TeaA VA249_27620 IPR038404 TRAP transporter solute receptor DctP superfamily VA249_27620 IPR026289 Solute binding protein, TakP-like VA249_27630 IPR006145 Pseudouridine synthase, RsuA/RluA VA249_27630 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site VA249_27630 IPR006225 Pseudouridine synthase, RluC/RluD VA249_27630 IPR020103 Pseudouridine synthase, catalytic domain superfamily VA249_27640 IPR036412 HAD-like superfamily VA249_27640 IPR006379 HAD-superfamily hydrolase, subfamily IIB VA249_27640 IPR023214 HAD superfamily VA249_27640 IPR000150 Cof family VA249_27660 IPR033417 Periplasmic sensor domain CHASE8 VA249_27660 IPR003660 HAMP domain VA249_27660 IPR029787 Nucleotide cyclase VA249_27660 IPR000160 GGDEF domain VA249_27680 IPR008523 Protein of unknown function DUF805 VA249_27690 IPR000801 Putative esterase VA249_27690 IPR029058 Alpha/Beta hydrolase fold VA249_27690 IPR014186 S-formylglutathione hydrolase VA249_27700 IPR020843 Polyketide synthase, enoylreductase domain VA249_27700 IPR036291 NAD(P)-binding domain superfamily VA249_27700 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site VA249_27700 IPR013154 Alcohol dehydrogenase, N-terminal VA249_27700 IPR014183 Alcohol dehydrogenase class III VA249_27700 IPR013149 Alcohol dehydrogenase, C-terminal VA249_27700 IPR011032 GroES-like superfamily VA249_27710 IPR001447 Arylamine N-acetyltransferase VA249_27710 IPR038765 Papain-like cysteine peptidase superfamily VA249_27720 IPR005119 LysR, substrate-binding VA249_27720 IPR000847 Transcription regulator HTH, LysR VA249_27720 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_27720 IPR036390 Winged helix DNA-binding domain superfamily VA249_27740 IPR011042 Six-bladed beta-propeller, TolB-like VA249_27740 IPR029058 Alpha/Beta hydrolase fold VA249_27740 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain VA249_27750 IPR001123 Amino acid exporter protein, LeuE-type VA249_27760 IPR036390 Winged helix DNA-binding domain superfamily VA249_27760 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_27760 IPR019885 Transcription regulator HTH, AsnC-type, conserved site VA249_27760 IPR019888 Transcription regulator AsnC-type VA249_27760 IPR011008 Dimeric alpha-beta barrel VA249_27760 IPR000485 AsnC-type HTH domain VA249_27760 IPR011991 ArsR-like helix-turn-helix domain VA249_27760 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VA249_27780 IPR000390 Small multidrug resistance protein family VA249_27810 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VA249_27810 IPR005618 Outer membrane protein, OmpW VA249_27820 IPR011852 TRAP transporter solute receptor, TAXI family VA249_27850 IPR039562 Membrane fusion protein, biotin-lipoyl like domain VA249_27860 IPR004638 Drug resistance transporter EmrB-like VA249_27860 IPR011701 Major facilitator superfamily VA249_27860 IPR020846 Major facilitator superfamily domain VA249_27860 IPR036259 MFS transporter superfamily VA249_27880 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VA249_27880 IPR037523 Vicinal oxygen chelate (VOC) domain VA249_27880 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VA249_27890 IPR001123 Amino acid exporter protein, LeuE-type VA249_27890 IPR004777 L-lysine exporter/arginine exporter VA249_27900 IPR004090 Chemotaxis methyl-accepting receptor VA249_27900 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VA249_27900 IPR029151 Periplasmic sensor-like domain superfamily VA249_27900 IPR000727 Target SNARE coiled-coil homology domain VA249_27900 IPR003660 HAMP domain VA249_27900 IPR033479 Double Cache domain 1 VA249_28040 IPR013785 Aldolase-type TIM barrel VA249_28040 IPR036206 Thiamin phosphate synthase superfamily VA249_28040 IPR022998 Thiamine phosphate synthase/TenI VA249_28040 IPR034291 Thiamine phosphate synthase VA249_28050 IPR000417 Hydroxyethylthiazole kinase VA249_28050 IPR029056 Ribokinase-like VA249_28060 IPR027574 Thiaminase II VA249_28060 IPR016084 Haem oxygenase-like, multi-helical VA249_28060 IPR004305 Thiaminase-2/PQQC VA249_28070 IPR027939 NMT1/THI5 family VA249_28070 IPR015168 SsuA/THI5-like VA249_28080 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VA249_28080 IPR035906 MetI-like superfamily VA249_28090 IPR003593 AAA+ ATPase domain VA249_28090 IPR017871 ABC transporter, conserved site VA249_28090 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_28090 IPR003439 ABC transporter-like VA249_28100 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase VA249_28100 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase VA249_28100 IPR029056 Ribokinase-like VA249_28110 IPR035068 Metalloprotease TldD/PmbA, N-terminal VA249_28110 IPR036059 Metalloprotease TldD/PmbA superfamily VA249_28110 IPR002510 Metalloprotease TldD/PmbA VA249_28120 IPR036059 Metalloprotease TldD/PmbA superfamily VA249_28120 IPR035068 Metalloprotease TldD/PmbA, N-terminal VA249_28120 IPR002510 Metalloprotease TldD/PmbA VA249_28120 IPR025502 TldD VA249_28130 IPR029028 Alpha/beta knot methyltransferases VA249_28130 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VA249_28130 IPR007158 tRNA (pseudouridine(54)-N(1))-methyltransferase, TrmY VA249_28180 IPR021230 Protein of unknown function DUF2810 VA249_28190 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 VA249_28190 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain VA249_28190 IPR036291 NAD(P)-binding domain superfamily VA249_28190 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VA249_28190 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VA249_28210 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily VA249_28210 IPR030395 Glycerophosphodiester phosphodiesterase domain VA249_28220 IPR011006 CheY-like superfamily VA249_28220 IPR016032 Signal transduction response regulator, C-terminal effector VA249_28220 IPR001789 Signal transduction response regulator, receiver domain VA249_28220 IPR039420 Transcriptional regulatory protein WalR-like VA249_28220 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_28220 IPR001867 OmpR/PhoB-type DNA-binding domain VA249_28230 IPR011006 CheY-like superfamily VA249_28230 IPR001867 OmpR/PhoB-type DNA-binding domain VA249_28230 IPR016032 Signal transduction response regulator, C-terminal effector VA249_28230 IPR001789 Signal transduction response regulator, receiver domain VA249_28230 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_28230 IPR039420 Transcriptional regulatory protein WalR-like VA249_28240 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VA249_28240 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain VA249_28240 IPR031930 2-component histidine kinase, sensor domain VA249_28240 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily VA249_28240 IPR005467 Histidine kinase domain VA249_28240 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VA249_28240 IPR003594 Histidine kinase/HSP90-like ATPase VA249_28240 IPR003660 HAMP domain VA249_28240 IPR038428 2-component histidine kinase, sensor domain superfamily VA249_28250 IPR010105 TonB-dependent siderophore receptor VA249_28250 IPR000531 TonB-dependent receptor-like, beta-barrel VA249_28250 IPR039423 TonB-dependent receptor-like VA249_28250 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily VA249_28250 IPR037066 TonB-dependent receptor, plug domain superfamily VA249_28250 IPR012910 TonB-dependent receptor, plug domain VA249_28270 IPR002898 MotA/TolQ/ExbB proton channel VA249_28280 IPR002898 MotA/TolQ/ExbB proton channel VA249_28290 IPR003400 Biopolymer transport protein ExbD/TolR VA249_28330 IPR023614 Porin domain superfamily VA249_28330 IPR033900 Porin domain, Gram-negative type VA249_28340 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain VA249_28340 IPR023302 Peptidase S9A, N-terminal domain VA249_28340 IPR029058 Alpha/Beta hydrolase fold VA249_28340 IPR002470 Peptidase S9A, prolyl oligopeptidase VA249_28340 IPR002471 Peptidase S9, serine active site VA249_28350 IPR011701 Major facilitator superfamily VA249_28350 IPR020846 Major facilitator superfamily domain VA249_28350 IPR036259 MFS transporter superfamily VA249_28350 IPR004734 Multidrug resistance protein VA249_28360 IPR020855 Ureohydrolase, manganese-binding site VA249_28360 IPR023696 Ureohydrolase domain superfamily VA249_28360 IPR023694 Agmatinase VA249_28360 IPR005925 Agmatinase-related VA249_28360 IPR006035 Ureohydrolase VA249_28370 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal VA249_28370 IPR000183 Ornithine/DAP/Arg decarboxylase VA249_28370 IPR041128 Arginine decarboxylase, C-terminal helical VA249_28370 IPR002985 Arginine decarboxylase VA249_28370 IPR029066 PLP-binding barrel VA249_28370 IPR040634 Arginine decarboxylase, helical bundle domain VA249_28370 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal VA249_28380 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VA249_28380 IPR001279 Metallo-beta-lactamase VA249_28380 IPR001018 Beta-lactamase, class-B, conserved site VA249_28390 IPR041107 RimK, PreATP-grasp domain VA249_28390 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX VA249_28390 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK VA249_28390 IPR021109 Aspartic peptidase domain superfamily VA249_28390 IPR013815 ATP-grasp fold, subdomain 1 VA249_28390 IPR013651 ATP-grasp fold, RimK-type VA249_28390 IPR011761 ATP-grasp fold VA249_28400 IPR041107 RimK, PreATP-grasp domain VA249_28400 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX VA249_28400 IPR011761 ATP-grasp fold VA249_28400 IPR013651 ATP-grasp fold, RimK-type VA249_28400 IPR013815 ATP-grasp fold, subdomain 1 VA249_28400 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK VA249_28410 IPR005119 LysR, substrate-binding VA249_28410 IPR000847 Transcription regulator HTH, LysR VA249_28410 IPR036390 Winged helix DNA-binding domain superfamily VA249_28410 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_28450 IPR017853 Glycoside hydrolase superfamily VA249_28450 IPR018120 Glycoside hydrolase family 1, active site VA249_28450 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site VA249_28450 IPR001360 Glycoside hydrolase family 1 VA249_28460 IPR033479 Double Cache domain 1 VA249_28460 IPR003594 Histidine kinase/HSP90-like ATPase VA249_28460 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VA249_28460 IPR005467 Histidine kinase domain VA249_28460 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain VA249_28460 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily VA249_28460 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VA249_28460 IPR029151 Periplasmic sensor-like domain superfamily VA249_28460 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) VA249_28470 IPR025944 Sigma-54 interaction domain, conserved site VA249_28470 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VA249_28470 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VA249_28470 IPR002078 RNA polymerase sigma factor 54 interaction domain VA249_28470 IPR001789 Signal transduction response regulator, receiver domain VA249_28470 IPR003593 AAA+ ATPase domain VA249_28470 IPR002197 DNA binding HTH domain, Fis-type VA249_28470 IPR009057 Homeobox-like domain superfamily VA249_28470 IPR011006 CheY-like superfamily VA249_28470 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_28480 IPR000160 GGDEF domain VA249_28480 IPR029787 Nucleotide cyclase VA249_28500 IPR004685 Branched-chain amino acid transport system II carrier protein VA249_28530 IPR030862 L-2-hydroxyglutarate dehydrogenase VA249_28530 IPR036188 FAD/NAD(P)-binding domain superfamily VA249_28530 IPR006076 FAD dependent oxidoreductase VA249_28550 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B VA249_28550 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD VA249_28560 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD VA249_28560 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B VA249_28570 IPR018176 Tryptophanase, conserved site VA249_28570 IPR013440 Tryptophanase VA249_28570 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase VA249_28570 IPR011166 Beta-eliminating lyase family VA249_28570 IPR015424 Pyridoxal phosphate-dependent transferase VA249_28570 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 VA249_28570 IPR015421 Pyridoxal phosphate-dependent transferase, major domain VA249_28590 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain VA249_28590 IPR002668 Concentrative nucleoside transporter N-terminal domain VA249_28590 IPR011657 Concentrative nucleoside transporter C-terminal domain VA249_28590 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial VA249_28590 IPR008276 Concentrative nucleoside transporter VA249_28610 IPR035919 EAL domain superfamily VA249_28610 IPR029787 Nucleotide cyclase VA249_28610 IPR005330 MHYT domain VA249_28610 IPR000160 GGDEF domain VA249_28610 IPR001633 EAL domain VA249_28650 IPR029787 Nucleotide cyclase VA249_28650 IPR000160 GGDEF domain VA249_28660 IPR014133 Cryptochrome DASH VA249_28660 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain VA249_28660 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily VA249_28660 IPR002081 Cryptochrome/DNA photolyase class 1 VA249_28660 IPR006050 DNA photolyase, N-terminal VA249_28660 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VA249_28660 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily VA249_28670 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily VA249_28670 IPR007357 Deoxyribodipyrimidine photolyase-related protein VA249_28670 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VA249_28690 IPR011057 Mss4-like superfamily VA249_28690 IPR002579 Peptide methionine sulphoxide reductase MrsB VA249_28690 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily VA249_28690 IPR002569 Peptide methionine sulphoxide reductase MsrA VA249_28690 IPR028427 Peptide methionine sulfoxide reductase VA249_28700 IPR036102 OsmC/Ohr superfamily VA249_28700 IPR003718 OsmC/Ohr family VA249_28700 IPR015946 K homology domain-like, alpha/beta VA249_28710 IPR011004 Trimeric LpxA-like superfamily VA249_28710 IPR018357 Hexapeptide transferase, conserved site VA249_28710 IPR001451 Hexapeptide repeat VA249_28710 IPR013710 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, N-terminal VA249_28710 IPR019873 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, DapH VA249_28730 IPR023198 Phosphoglycolate phosphatase-like, domain 2 VA249_28730 IPR036412 HAD-like superfamily VA249_28730 IPR006439 HAD hydrolase, subfamily IA VA249_28730 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB VA249_28730 IPR041492 Haloacid dehalogenase-like hydrolase VA249_28730 IPR023214 HAD superfamily VA249_28780 IPR010920 LSM domain superfamily VA249_28780 IPR023408 Mechanosensitive ion channel MscS domain superfamily VA249_28780 IPR006686 Mechanosensitive ion channel MscS, conserved site VA249_28780 IPR011066 Mechanosensitive ion channel MscS, C-terminal VA249_28780 IPR006685 Mechanosensitive ion channel MscS VA249_28780 IPR025692 Mechanosensitive ion channel inner membrane domain 1 VA249_28780 IPR024393 Mechanosensitive ion channel MscS, porin domain VA249_28780 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 VA249_28790 IPR000834 Peptidase M14, carboxypeptidase A VA249_28790 IPR040626 Cytosolic carboxypeptidase, N-terminal VA249_28800 IPR006690 Outer membrane protein, OmpA-like, conserved site VA249_28800 IPR000498 Outer membrane protein OmpA-like, transmembrane domain VA249_28800 IPR036737 OmpA-like domain superfamily VA249_28800 IPR006665 OmpA-like domain VA249_28800 IPR002368 Outer membrane protein, OmpA VA249_28800 IPR006664 Outer membrane protein, bacterial VA249_28800 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VA249_28820 IPR001046 NRAMP family VA249_28830 IPR000109 Proton-dependent oligopeptide transporter family VA249_28830 IPR036259 MFS transporter superfamily VA249_28830 IPR020846 Major facilitator superfamily domain VA249_28830 IPR005279 Dipeptide/tripeptide permease VA249_28830 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site VA249_28840 IPR029009 Allosteric substrate binding domain superfamily VA249_28840 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form VA249_28840 IPR005131 Serine dehydratase beta chain VA249_28840 IPR005130 Serine dehydratase-like, alpha subunit VA249_28890 IPR000189 Prokaryotic transglycosylase, active site VA249_28890 IPR023346 Lysozyme-like domain superfamily VA249_28890 IPR018392 LysM domain VA249_28890 IPR008258 Transglycosylase SLT domain 1 VA249_28890 IPR036779 LysM domain superfamily VA249_28930 IPR001444 Flagellar basal body rod protein, N-terminal VA249_28930 IPR019776 Flagellar basal body rod protein, conserved site VA249_28930 IPR006300 Flagellar basal-body rod protein FlgB VA249_28940 IPR019776 Flagellar basal body rod protein, conserved site VA249_28940 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VA249_28940 IPR001444 Flagellar basal body rod protein, N-terminal VA249_28940 IPR006299 Flagellar basal-body rod protein FlgC VA249_28950 IPR025965 FlgD Ig-like domain VA249_28950 IPR025963 FlgD Tudor-like domain VA249_28950 IPR005648 Flagellar hook capping protein VA249_28960 IPR020013 Flagellar hook-basal body protein, FlgE/F/G VA249_28960 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VA249_28960 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like VA249_28960 IPR019776 Flagellar basal body rod protein, conserved site VA249_28960 IPR011491 Flagellar hook protein FlgE VA249_28960 IPR037058 Flagellar hook protein FlgE superfamily VA249_28960 IPR001444 Flagellar basal body rod protein, N-terminal VA249_28970 IPR019776 Flagellar basal body rod protein, conserved site VA249_28970 IPR020013 Flagellar hook-basal body protein, FlgE/F/G VA249_28970 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VA249_28970 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like VA249_28970 IPR001444 Flagellar basal body rod protein, N-terminal VA249_28990 IPR012834 Flagellar basal-body rod FlgG VA249_28990 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like VA249_28990 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VA249_28990 IPR020013 Flagellar hook-basal body protein, FlgE/F/G VA249_28990 IPR019776 Flagellar basal body rod protein, conserved site VA249_28990 IPR001444 Flagellar basal body rod protein, N-terminal VA249_29000 IPR000527 Flagellar L-ring protein VA249_29010 IPR001782 Flagellar P-ring protein VA249_29020 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain VA249_29020 IPR023346 Lysozyme-like domain superfamily VA249_29020 IPR013377 Peptidoglycan hydrolase FlgJ VA249_29020 IPR019301 Flagellar protein FlgJ, N-terminal VA249_29030 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VA249_29030 IPR019776 Flagellar basal body rod protein, conserved site VA249_29030 IPR001444 Flagellar basal body rod protein, N-terminal VA249_29030 IPR002371 Flagellar hook-associated protein 1 VA249_29090 IPR000262 FMN-dependent dehydrogenase VA249_29090 IPR013785 Aldolase-type TIM barrel VA249_29090 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent VA249_29100 IPR036390 Winged helix DNA-binding domain superfamily VA249_29100 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_29100 IPR000847 Transcription regulator HTH, LysR VA249_29100 IPR005119 LysR, substrate-binding VA249_29150 IPR036737 OmpA-like domain superfamily VA249_29150 IPR006665 OmpA-like domain VA249_29150 IPR025713 Motility protein B, N-terminal domain VA249_29160 IPR002898 MotA/TolQ/ExbB proton channel VA249_29160 IPR000540 Flagellar motor protein MotA, conserved site VA249_29160 IPR022522 Flagellar motor stator, MotA VA249_29170 IPR012845 RNA polymerase sigma factor, FliA/WhiG VA249_29170 IPR013324 RNA polymerase sigma factor, region 3/4-like VA249_29170 IPR013325 RNA polymerase sigma factor, region 2 VA249_29170 IPR007630 RNA polymerase sigma-70 region 4 VA249_29170 IPR000943 RNA polymerase sigma-70 VA249_29170 IPR007627 RNA polymerase sigma-70 region 2 VA249_29170 IPR014284 RNA polymerase sigma-70 like domain VA249_29180 IPR005503 Flagellar basal body-associated protein FliL VA249_29210 IPR003713 Flagellar protein FliS VA249_29210 IPR036584 Flagellar protein FliS superfamily VA249_29220 IPR010810 Flagellin hook, IN motif VA249_29220 IPR010809 Flagellar hook-associated protein 2, C-terminal VA249_29220 IPR003481 Flagellar hook-associated protein 2, N-terminal VA249_29220 IPR040026 Flagellar hook-associated protein 2 VA249_29250 IPR001492 Flagellin VA249_29250 IPR042187 Flagellin, C-terminal domain, subdomain 2 VA249_29250 IPR001029 Flagellin, D0/D1 domain VA249_29270 IPR042194 FHIPEP, domain 1 VA249_29270 IPR042193 FHIPEP, domain 3 VA249_29270 IPR025505 FHIPEP conserved site VA249_29270 IPR006301 Flagellar biosynthesis protein FlhA VA249_29270 IPR001712 Type III secretion system FHIPEP VA249_29270 IPR042196 FHIPEP, domain 4 VA249_29280 IPR042194 FHIPEP, domain 1 VA249_29280 IPR042193 FHIPEP, domain 3 VA249_29280 IPR042196 FHIPEP, domain 4 VA249_29280 IPR025505 FHIPEP conserved site VA249_29280 IPR001712 Type III secretion system FHIPEP VA249_29280 IPR006301 Flagellar biosynthesis protein FlhA VA249_29290 IPR006136 Flagellar biosynthetic protein FlhB VA249_29290 IPR029025 Type III secretion system substrate exporter, C-terminal VA249_29290 IPR006135 Type III secretion system substrate exporter VA249_29300 IPR006303 Flagellar biosynthesis protein FliR VA249_29300 IPR002010 Type III secretion system inner membrane R protein VA249_29310 IPR006305 Flagellar biosynthesis protein FliQ VA249_29310 IPR002191 Bacterial export protein family 3 VA249_29320 IPR005838 Type III secretion system inner membrane P protein VA249_29320 IPR005837 Flagellar transport protein FliP VA249_29330 IPR001543 Surface presentation of antigen (SpoA) VA249_29330 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb VA249_29330 IPR036429 SpoA-like superfamily VA249_29330 IPR012826 Flagellar motor switch FliN VA249_29360 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_29360 IPR029995 Transcriptional activator SfnR/FlbD VA249_29360 IPR025944 Sigma-54 interaction domain, conserved site VA249_29360 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VA249_29360 IPR003593 AAA+ ATPase domain VA249_29360 IPR011006 CheY-like superfamily VA249_29360 IPR009057 Homeobox-like domain superfamily VA249_29360 IPR002197 DNA binding HTH domain, Fis-type VA249_29360 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VA249_29360 IPR001789 Signal transduction response regulator, receiver domain VA249_29360 IPR002078 RNA polymerase sigma factor 54 interaction domain VA249_29370 IPR001624 Flagellar hook-basal body complex protein FliE VA249_29390 IPR006182 Secretory protein YscJ/FliF VA249_29390 IPR013556 Flagellar M-ring C-terminal VA249_29390 IPR000067 Flagellar M-ring protein FliF VA249_29400 IPR000090 Flagellar motor switch protein FliG VA249_29400 IPR023087 Flagellar motor switch protein FliG, C-terminal VA249_29400 IPR011002 Flagellar motor switch protein FliG, alpha-helical VA249_29400 IPR028263 Flagellar motor switch protein FliG, N-terminal domain VA249_29400 IPR032779 Flagellar motor switch protein FliG, middle domain VA249_29420 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain VA249_29420 IPR040627 T3SS EscN ATPase, C-terminal VA249_29420 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_29420 IPR020005 Flagellar export ATPase FliI, clade 1 VA249_29420 IPR005714 ATPase, type III secretion system, FliI/YscN VA249_29420 IPR032463 ATPase, type III secretion system, FliI VA249_29420 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site VA249_29420 IPR003593 AAA+ ATPase domain VA249_29450 IPR023710 Probable phosphatase YcdX VA249_29450 IPR003141 Polymerase/histidinol phosphatase, N-terminal VA249_29450 IPR016195 Polymerase/histidinol phosphatase-like VA249_29470 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VA249_29470 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VA249_29470 IPR037523 Vicinal oxygen chelate (VOC) domain VA249_29470 IPR037478 YwkD-like domain VA249_29480 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_29480 IPR005119 LysR, substrate-binding VA249_29480 IPR000847 Transcription regulator HTH, LysR VA249_29480 IPR036390 Winged helix DNA-binding domain superfamily VA249_29520 IPR001867 OmpR/PhoB-type DNA-binding domain VA249_29520 IPR011006 CheY-like superfamily VA249_29520 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_29520 IPR039420 Transcriptional regulatory protein WalR-like VA249_29520 IPR001789 Signal transduction response regulator, receiver domain VA249_29530 IPR003594 Histidine kinase/HSP90-like ATPase VA249_29530 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VA249_29530 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain VA249_29530 IPR011006 CheY-like superfamily VA249_29530 IPR005467 Histidine kinase domain VA249_29530 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VA249_29530 IPR000014 PAS domain VA249_29530 IPR000700 PAS-associated, C-terminal VA249_29530 IPR035965 PAS domain superfamily VA249_29530 IPR013656 PAS fold-4 VA249_29530 IPR001789 Signal transduction response regulator, receiver domain VA249_29530 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily VA249_29530 IPR001610 PAC motif VA249_29540 IPR025161 Putative transposase IS4/IS5 family VA249_29550 IPR015421 Pyridoxal phosphate-dependent transferase, major domain VA249_29550 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 VA249_29550 IPR015424 Pyridoxal phosphate-dependent transferase VA249_29550 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site VA249_29550 IPR000192 Aminotransferase class V domain VA249_29570 IPR001633 EAL domain VA249_29570 IPR035919 EAL domain superfamily VA249_29570 IPR005330 MHYT domain VA249_29570 IPR000160 GGDEF domain VA249_29570 IPR029787 Nucleotide cyclase VA249_29580 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase VA249_29580 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site VA249_29580 IPR004839 Aminotransferase, class I/classII VA249_29580 IPR015424 Pyridoxal phosphate-dependent transferase VA249_29580 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 VA249_29580 IPR015421 Pyridoxal phosphate-dependent transferase, major domain VA249_29590 IPR020843 Polyketide synthase, enoylreductase domain VA249_29590 IPR036291 NAD(P)-binding domain superfamily VA249_29590 IPR004627 L-threonine 3-dehydrogenase VA249_29590 IPR013154 Alcohol dehydrogenase, N-terminal VA249_29590 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site VA249_29590 IPR013149 Alcohol dehydrogenase, C-terminal VA249_29590 IPR011032 GroES-like superfamily VA249_29600 IPR011010 DNA breaking-rejoining enzyme, catalytic core VA249_29600 IPR013762 Integrase-like, catalytic domain superfamily VA249_29600 IPR002104 Integrase, catalytic domain VA249_29600 IPR010998 Integrase/recombinase, N-terminal VA249_29600 IPR022000 Min27-like integrase, DNA-binding domain VA249_29620 IPR012340 Nucleic acid-binding, OB-fold VA249_29620 IPR000424 Primosome PriB/single-strand DNA-binding VA249_29620 IPR011344 Single-stranded DNA-binding protein VA249_29710 IPR036286 LexA/Signal peptidase-like superfamily VA249_29710 IPR010982 Lambda repressor-like, DNA-binding domain superfamily VA249_29710 IPR039418 LexA-like VA249_29710 IPR015927 Peptidase S24/S26A/S26B/S26C VA249_29710 IPR001387 Cro/C1-type helix-turn-helix domain VA249_29830 IPR003615 HNH nuclease VA249_29830 IPR010373 Protein of unknown function DUF968 VA249_29910 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_29910 IPR010906 Bacteriophage lambda, Nu1, terminase small subunit VA249_29910 IPR009061 Putative DNA-binding domain superfamily VA249_29920 IPR003458 Bacteriophage T4, Gp38, tail fibre assembly VA249_30110 IPR013154 Alcohol dehydrogenase, N-terminal VA249_30110 IPR013149 Alcohol dehydrogenase, C-terminal VA249_30110 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site VA249_30110 IPR011032 GroES-like superfamily VA249_30110 IPR004627 L-threonine 3-dehydrogenase VA249_30110 IPR036291 NAD(P)-binding domain superfamily VA249_30110 IPR020843 Polyketide synthase, enoylreductase domain VA249_30120 IPR033838 Colicin V processing peptidase VA249_30120 IPR039421 Type I protein exporter VA249_30120 IPR005074 Peptidase C39, bacteriocin processing VA249_30120 IPR017871 ABC transporter, conserved site VA249_30120 IPR003593 AAA+ ATPase domain VA249_30120 IPR036640 ABC transporter type 1, transmembrane domain superfamily VA249_30120 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_30120 IPR011527 ABC transporter type 1, transmembrane domain VA249_30120 IPR003439 ABC transporter-like VA249_30140 IPR036397 Ribonuclease H superfamily VA249_30140 IPR012337 Ribonuclease H-like superfamily VA249_30140 IPR001584 Integrase, catalytic core VA249_30140 IPR025948 HTH-like domain VA249_30170 IPR006686 Mechanosensitive ion channel MscS, conserved site VA249_30170 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 VA249_30170 IPR011066 Mechanosensitive ion channel MscS, C-terminal VA249_30170 IPR006685 Mechanosensitive ion channel MscS VA249_30170 IPR023408 Mechanosensitive ion channel MscS domain superfamily VA249_30170 IPR010920 LSM domain superfamily VA249_30180 IPR006686 Mechanosensitive ion channel MscS, conserved site VA249_30180 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 VA249_30180 IPR010920 LSM domain superfamily VA249_30180 IPR006685 Mechanosensitive ion channel MscS VA249_30180 IPR011066 Mechanosensitive ion channel MscS, C-terminal VA249_30180 IPR023408 Mechanosensitive ion channel MscS domain superfamily VA249_30200 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent VA249_30200 IPR000262 FMN-dependent dehydrogenase VA249_30200 IPR020920 L-lactate dehydrogenase, bacterial VA249_30200 IPR013785 Aldolase-type TIM barrel VA249_30200 IPR037396 FMN hydroxy acid dehydrogenase domain VA249_30200 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site VA249_30210 IPR005119 LysR, substrate-binding VA249_30210 IPR000847 Transcription regulator HTH, LysR VA249_30210 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_30210 IPR036390 Winged helix DNA-binding domain superfamily VA249_30220 IPR002471 Peptidase S9, serine active site VA249_30220 IPR023302 Peptidase S9A, N-terminal domain VA249_30220 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain VA249_30220 IPR002470 Peptidase S9A, prolyl oligopeptidase VA249_30220 IPR029058 Alpha/Beta hydrolase fold VA249_30230 IPR041699 Lon protease, AAA domain VA249_30230 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VA249_30230 IPR020568 Ribosomal protein S5 domain 2-type fold VA249_30230 IPR027065 Lon protease VA249_30230 IPR008269 Peptidase S16, Lon proteolytic domain VA249_30240 IPR004090 Chemotaxis methyl-accepting receptor VA249_30240 IPR003660 HAMP domain VA249_30240 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain VA249_30240 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VA249_30240 IPR000727 Target SNARE coiled-coil homology domain VA249_30250 IPR012349 FMN-binding split barrel VA249_30250 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal VA249_30250 IPR009875 PilZ domain VA249_30260 IPR016181 Acyl-CoA N-acyltransferase VA249_30260 IPR000182 GNAT domain VA249_30270 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VA249_30270 IPR006311 Twin-arginine translocation pathway, signal sequence VA249_30270 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VA249_30270 IPR004494 MauM/NapG ferredoxin-type protein VA249_30280 IPR011886 Ferredoxin-type protein, NapH/MauN family VA249_30280 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VA249_30280 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VA249_30290 IPR001845 HTH ArsR-type DNA-binding domain VA249_30290 IPR018334 ArsR-type transcription regulator, HTH motif VA249_30290 IPR011991 ArsR-like helix-turn-helix domain VA249_30290 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_30290 IPR036390 Winged helix DNA-binding domain superfamily VA249_30320 IPR022216 Putative ABC cobalt transporter VA249_30320 IPR003439 ABC transporter-like VA249_30320 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_30320 IPR003593 AAA+ ATPase domain VA249_30320 IPR017871 ABC transporter, conserved site VA249_30330 IPR022914 Protein of unknown function UPF0397 VA249_30330 IPR009825 ECF transporter, substrate-specific component-like VA249_30340 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VA249_30350 IPR011223 Uncharacterised conserved protein UCP028770 VA249_30370 IPR000160 GGDEF domain VA249_30370 IPR029787 Nucleotide cyclase VA249_30400 IPR000845 Nucleoside phosphorylase domain VA249_30400 IPR035994 Nucleoside phosphorylase superfamily VA249_30400 IPR004402 Purine nucleoside phosphorylase DeoD-type VA249_30410 IPR013560 Domain of unknown function DUF1722 VA249_30420 IPR009061 Putative DNA-binding domain superfamily VA249_30420 IPR000551 MerR-type HTH domain VA249_30430 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VA249_30430 IPR006050 DNA photolyase, N-terminal VA249_30430 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal VA249_30430 IPR002081 Cryptochrome/DNA photolyase class 1 VA249_30430 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain VA249_30430 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily VA249_30430 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily VA249_30440 IPR018392 LysM domain VA249_30440 IPR038063 L,D-transpeptidase catalytic domain-like VA249_30440 IPR005490 L,D-transpeptidase catalytic domain VA249_30440 IPR041597 L,D-transpeptidase C-terminal domain VA249_30460 IPR014001 Helicase superfamily 1/2, ATP-binding domain VA249_30460 IPR028621 ATP-dependent RNA helicase SrmB VA249_30460 IPR001650 Helicase, C-terminal VA249_30460 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_30460 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VA249_30460 IPR014014 RNA helicase, DEAD-box type, Q motif VA249_30460 IPR011545 DEAD/DEAH box helicase domain VA249_30470 IPR024370 PBP domain VA249_30480 IPR035906 MetI-like superfamily VA249_30480 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VA249_30480 IPR011864 Phosphate ABC transporter, permease protein PstC VA249_30490 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VA249_30490 IPR035906 MetI-like superfamily VA249_30490 IPR005672 Phosphate transport system permease protein PstA VA249_30500 IPR003439 ABC transporter-like VA249_30500 IPR003593 AAA+ ATPase domain VA249_30500 IPR017871 ABC transporter, conserved site VA249_30500 IPR015850 ABC transporter, phosphate import, PstB VA249_30500 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_30500 IPR005670 Phosphate transport system permease protein 1 VA249_30510 IPR033416 Periplasmic sensor domain CHASE7 VA249_30510 IPR000160 GGDEF domain VA249_30510 IPR029787 Nucleotide cyclase VA249_30530 IPR036465 von Willebrand factor A-like domain superfamily VA249_30530 IPR002035 von Willebrand factor, type A VA249_30530 IPR022933 Uncharacterised protein family UPF0353 VA249_30560 IPR002881 Domain of unknown function DUF58 VA249_30560 IPR036465 von Willebrand factor A-like domain superfamily VA249_30570 IPR041628 ChlI/MoxR, AAA lid domain VA249_30570 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_30570 IPR011703 ATPase, AAA-3 VA249_30580 IPR033479 Double Cache domain 1 VA249_30580 IPR003660 HAMP domain VA249_30580 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VA249_30600 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_30600 IPR016032 Signal transduction response regulator, C-terminal effector VA249_30600 IPR000792 Transcription regulator LuxR, C-terminal VA249_30610 IPR018357 Hexapeptide transferase, conserved site VA249_30610 IPR024688 Maltose/galactoside acetyltransferase VA249_30610 IPR011004 Trimeric LpxA-like superfamily VA249_30610 IPR001451 Hexapeptide repeat VA249_30620 IPR036291 NAD(P)-binding domain superfamily VA249_30620 IPR002347 Short-chain dehydrogenase/reductase SDR VA249_30620 IPR020904 Short-chain dehydrogenase/reductase, conserved site VA249_30630 IPR016132 Phytochrome chromophore attachment domain VA249_30630 IPR001633 EAL domain VA249_30630 IPR035919 EAL domain superfamily VA249_30630 IPR029787 Nucleotide cyclase VA249_30630 IPR029016 GAF-like domain superfamily VA249_30630 IPR000160 GGDEF domain VA249_30630 IPR013515 Phytochrome, central region VA249_30630 IPR001294 Phytochrome VA249_30630 IPR003018 GAF domain VA249_30660 IPR036737 OmpA-like domain superfamily VA249_30660 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VA249_30660 IPR002368 Outer membrane protein, OmpA VA249_30660 IPR006665 OmpA-like domain VA249_30660 IPR006690 Outer membrane protein, OmpA-like, conserved site VA249_30660 IPR000498 Outer membrane protein OmpA-like, transmembrane domain VA249_30660 IPR006664 Outer membrane protein, bacterial VA249_30680 IPR004796 Phosphotransferase system, cellobiose-type IIC component VA249_30680 IPR003352 Phosphotransferase system, EIIC VA249_30680 IPR004501 Phosphotransferase system, EIIC component, type 3 VA249_30690 IPR003352 Phosphotransferase system, EIIC VA249_30690 IPR004501 Phosphotransferase system, EIIC component, type 3 VA249_30690 IPR004796 Phosphotransferase system, cellobiose-type IIC component VA249_30700 IPR009057 Homeobox-like domain superfamily VA249_30700 IPR038965 Transposase InsF-like VA249_30710 IPR014068 Azurin VA249_30710 IPR000923 Blue (type 1) copper domain VA249_30710 IPR028871 Blue (type 1) copper protein, binding site VA249_30710 IPR008972 Cupredoxin VA249_30730 IPR023753 FAD/NAD(P)-binding domain VA249_30730 IPR036188 FAD/NAD(P)-binding domain superfamily VA249_30740 IPR018107 Sodium:dicarboxylate symporter, conserved site VA249_30740 IPR001991 Sodium:dicarboxylate symporter VA249_30740 IPR033380 Glutamate-aspartate symport protein GltP/GltT VA249_30740 IPR034703 Proton/glutamate-aspartate symporter GltP VA249_30740 IPR036458 Sodium:dicarboxylate symporter superfamily VA249_30750 IPR023198 Phosphoglycolate phosphatase-like, domain 2 VA249_30750 IPR036412 HAD-like superfamily VA249_30750 IPR006439 HAD hydrolase, subfamily IA VA249_30750 IPR023214 HAD superfamily VA249_30750 IPR041492 Haloacid dehalogenase-like hydrolase VA249_30760 IPR015943 WD40/YVTN repeat-like-containing domain superfamily VA249_30760 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily VA249_30760 IPR019405 Lactonase, 7-bladed beta propeller VA249_30770 IPR008914 Phosphatidylethanolamine-binding protein VA249_30770 IPR005247 YbhB/YbcL VA249_30770 IPR036610 PEBP-like superfamily VA249_30790 IPR004706 Arsenical-resistance protein Acr3 VA249_30790 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 VA249_30790 IPR038770 Sodium/solute symporter superfamily VA249_30840 IPR018227 Amino acid/polyamine transporter 2 VA249_30840 IPR013059 Tryptophan/tyrosine transporter VA249_30850 IPR000727 Target SNARE coiled-coil homology domain VA249_30850 IPR003660 HAMP domain VA249_30850 IPR033479 Double Cache domain 1 VA249_30850 IPR004090 Chemotaxis methyl-accepting receptor VA249_30850 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VA249_30850 IPR029151 Periplasmic sensor-like domain superfamily VA249_30860 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain VA249_30890 IPR011055 Duplicated hybrid motif VA249_30890 IPR018392 LysM domain VA249_30890 IPR013731 Opacity-associated protein A, N-terminal VA249_30890 IPR016047 Peptidase M23 VA249_30920 IPR011767 Glutaredoxin active site VA249_30920 IPR014025 Glutaredoxin subgroup VA249_30920 IPR011900 Glutaredoxin, GrxC VA249_30920 IPR002109 Glutaredoxin VA249_30920 IPR036249 Thioredoxin-like superfamily VA249_30930 IPR000620 EamA domain VA249_30960 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily VA249_30960 IPR011234 Fumarylacetoacetase-like, C-terminal VA249_30990 IPR002589 Macro domain VA249_31000 IPR004778 Homoserine/Threonine efflux protein VA249_31000 IPR001123 Amino acid exporter protein, LeuE-type VA249_31010 IPR016066 Alpha-D-phosphohexomutase, conserved site VA249_31010 IPR005841 Alpha-D-phosphohexomutase superfamily VA249_31010 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III VA249_31010 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily VA249_31010 IPR005843 Alpha-D-phosphohexomutase, C-terminal VA249_31010 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III VA249_31010 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II VA249_31010 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I VA249_31020 IPR001505 Copper centre Cu(A) VA249_31020 IPR002429 Cytochrome c oxidase subunit II-like C-terminal VA249_31020 IPR008972 Cupredoxin VA249_31020 IPR005728 Rickettsial palindromic element VA249_31020 IPR014222 Cytochrome c oxidase, subunit II VA249_31020 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain VA249_31020 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily VA249_31020 IPR034210 Cytochrome c oxidase subunit 2, C-terminal VA249_31030 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site VA249_31030 IPR033944 Cytochrome c oxidase subunit I domain VA249_31030 IPR023616 Cytochrome c oxidase-like, subunit I domain VA249_31030 IPR036927 Cytochrome c oxidase-like, subunit I superfamily VA249_31030 IPR000883 Cytochrome c oxidase subunit I VA249_31030 IPR014241 Cytochrome c oxidase, subunit I bacterial type VA249_31040 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamily VA249_31040 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 VA249_31050 IPR024791 Cytochrome c oxidase subunit III VA249_31050 IPR033945 Cytochrome c oxidase subunit III domain VA249_31050 IPR000298 Cytochrome c oxidase subunit III-like VA249_31050 IPR035973 Cytochrome c oxidase subunit III-like superfamily VA249_31050 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle VA249_31090 IPR023754 Heme A synthase, type 2 VA249_31090 IPR003780 COX15/CtaA family VA249_31100 IPR006369 Protohaem IX farnesyltransferase VA249_31100 IPR000537 UbiA prenyltransferase family VA249_31100 IPR030470 UbiA prenyltransferase conserved site VA249_31110 IPR002368 Outer membrane protein, OmpA VA249_31110 IPR006665 OmpA-like domain VA249_31110 IPR006690 Outer membrane protein, OmpA-like, conserved site VA249_31110 IPR036737 OmpA-like domain superfamily VA249_31110 IPR000498 Outer membrane protein OmpA-like, transmembrane domain VA249_31110 IPR006664 Outer membrane protein, bacterial VA249_31110 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VA249_31120 IPR006219 DHAP synthase, class 1 VA249_31120 IPR006218 DAHP synthetase I/KDSA VA249_31120 IPR013785 Aldolase-type TIM barrel VA249_31130 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VA249_31130 IPR013655 PAS fold-3 VA249_31130 IPR035965 PAS domain superfamily VA249_31130 IPR000014 PAS domain VA249_31130 IPR003660 HAMP domain VA249_31130 IPR004090 Chemotaxis methyl-accepting receptor VA249_31130 IPR001610 PAC motif VA249_31140 IPR035965 PAS domain superfamily VA249_31140 IPR013655 PAS fold-3 VA249_31140 IPR004090 Chemotaxis methyl-accepting receptor VA249_31140 IPR001610 PAC motif VA249_31140 IPR000700 PAS-associated, C-terminal VA249_31140 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VA249_31140 IPR000014 PAS domain VA249_31180 IPR020826 Transketolase binding site VA249_31180 IPR029061 Thiamin diphosphate-binding fold VA249_31180 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II VA249_31180 IPR005475 Transketolase-like, pyrimidine-binding domain VA249_31180 IPR033248 Transketolase, C-terminal domain VA249_31180 IPR033247 Transketolase family VA249_31180 IPR005474 Transketolase, N-terminal VA249_31180 IPR005478 Transketolase, bacterial-like VA249_31190 IPR018225 Transaldolase, active site VA249_31190 IPR013785 Aldolase-type TIM barrel VA249_31190 IPR001585 Transaldolase/Fructose-6-phosphate aldolase VA249_31190 IPR004730 Transaldolase type 1 VA249_31210 IPR001579 Glycoside hydrolase, chitinase active site VA249_31210 IPR011583 Chitinase II VA249_31210 IPR036573 Carbohydrate-binding module superfamily 5/12 VA249_31210 IPR003610 Carbohydrate-binding module family 5/12 VA249_31210 IPR002126 Cadherin-like VA249_31210 IPR001223 Glycoside hydrolase family 18, catalytic domain VA249_31210 IPR013540 Chitinase A N-terminal VA249_31210 IPR029070 Chitinase insertion domain superfamily VA249_31210 IPR014756 Immunoglobulin E-set VA249_31210 IPR022409 PKD/Chitinase domain VA249_31210 IPR013783 Immunoglobulin-like fold VA249_31210 IPR017853 Glycoside hydrolase superfamily VA249_31220 IPR001307 Thiosulphate sulfurtransferase, conserved site VA249_31220 IPR036873 Rhodanese-like domain superfamily VA249_31220 IPR001763 Rhodanese-like domain VA249_31250 IPR013783 Immunoglobulin-like fold VA249_31250 IPR022218 ToxR activated gene A lipoprotein domain VA249_31250 IPR003961 Fibronectin type III VA249_31250 IPR019503 Peptidase M66 domain VA249_31250 IPR036116 Fibronectin type III superfamily VA249_31260 IPR000594 THIF-type NAD/FAD binding fold VA249_31260 IPR012730 Molybdopterin synthase sulfurylase MoeB VA249_31260 IPR035985 Ubiquitin-activating enzyme VA249_31270 IPR036425 MoaB/Mog-like domain superfamily VA249_31270 IPR001453 MoaB/Mog domain VA249_31270 IPR008284 Molybdenum cofactor biosynthesis, conserved site VA249_31270 IPR038987 Molybdopterin biosynthesis protein MoeA-like VA249_31270 IPR036688 MoeA, C-terminal, domain IV superfamily VA249_31270 IPR005110 MoeA, N-terminal and linker domain VA249_31270 IPR036135 MoeA, N-terminal and linker domain superfamily VA249_31270 IPR005111 MoeA, C-terminal, domain IV VA249_31280 IPR001474 GTP cyclohydrolase I VA249_31280 IPR018234 GTP cyclohydrolase I, conserved site VA249_31280 IPR020602 GTP cyclohydrolase I domain VA249_31290 IPR001046 NRAMP family VA249_31310 IPR001807 Chloride channel, voltage gated VA249_31310 IPR014743 Chloride channel, core VA249_31310 IPR023861 Chloride channel, ClcA VA249_31340 IPR036812 NADP-dependent oxidoreductase domain superfamily VA249_31340 IPR023210 NADP-dependent oxidoreductase domain VA249_31340 IPR020471 Aldo/keto reductase VA249_31350 IPR001789 Signal transduction response regulator, receiver domain VA249_31350 IPR011006 CheY-like superfamily VA249_31370 IPR029056 Ribokinase-like VA249_31370 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr VA249_31370 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase VA249_31370 IPR004443 YjeF N-terminal domain VA249_31370 IPR017953 Carbohydrate kinase, predicted, conserved site VA249_31370 IPR036652 YjeF N-terminal domain superfamily VA249_31380 IPR013785 Aldolase-type TIM barrel VA249_31380 IPR001093 IMP dehydrogenase/GMP reductase VA249_31380 IPR015875 IMP dehydrogenase / GMP reductase, conserved site VA249_31380 IPR005993 GMP reductase VA249_31390 IPR000182 GNAT domain VA249_31390 IPR016181 Acyl-CoA N-acyltransferase VA249_31400 IPR029039 Flavoprotein-like superfamily VA249_31400 IPR008254 Flavodoxin/nitric oxide synthase VA249_31400 IPR005025 NADPH-dependent FMN reductase-like VA249_31410 IPR019794 Peroxidase, active site VA249_31410 IPR000763 Catalase-peroxidase haem VA249_31410 IPR010255 Haem peroxidase superfamily VA249_31410 IPR002016 Haem peroxidase VA249_31420 IPR039562 Membrane fusion protein, biotin-lipoyl like domain VA249_31420 IPR022871 Para-hydroxybenzoic acid efflux pump, subunit AaeA VA249_31420 IPR006143 RND efflux pump, membrane fusion protein VA249_31440 IPR006680 Amidohydrolase-related VA249_31440 IPR004722 Dihydroorotase VA249_31440 IPR002195 Dihydroorotase, conserved site VA249_31440 IPR011059 Metal-dependent hydrolase, composite domain superfamily VA249_31440 IPR032466 Metal-dependent hydrolase VA249_31450 IPR002129 Pyridoxal phosphate-dependent decarboxylase VA249_31450 IPR015421 Pyridoxal phosphate-dependent transferase, major domain VA249_31450 IPR015424 Pyridoxal phosphate-dependent transferase VA249_31450 IPR022517 Aspartate 1-decarboxylase, pyridoxal-dependent VA249_31480 IPR039538 BetI-type transcriptional repressor, C-terminal VA249_31480 IPR023772 DNA-binding HTH domain, TetR-type, conserved site VA249_31480 IPR009057 Homeobox-like domain superfamily VA249_31480 IPR001647 DNA-binding HTH domain, TetR-type VA249_31480 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily VA249_31480 IPR017757 Transcriptional repressor BetI VA249_31490 IPR011264 Betaine aldehyde dehydrogenase VA249_31490 IPR015590 Aldehyde dehydrogenase domain VA249_31490 IPR016163 Aldehyde dehydrogenase, C-terminal VA249_31490 IPR016161 Aldehyde/histidinol dehydrogenase VA249_31490 IPR016162 Aldehyde dehydrogenase, N-terminal VA249_31490 IPR029510 Aldehyde dehydrogenase, glutamic acid active site VA249_31500 IPR011533 Oxygen-dependent choline dehydrogenase VA249_31500 IPR036188 FAD/NAD(P)-binding domain superfamily VA249_31500 IPR027424 Glucose Oxidase, domain 2 VA249_31500 IPR012132 Glucose-methanol-choline oxidoreductase VA249_31500 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal VA249_31500 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal VA249_31510 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain VA249_31520 IPR035906 MetI-like superfamily VA249_31520 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VA249_31530 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_31530 IPR000644 CBS domain VA249_31530 IPR005892 Glycine betaine transport ATP-binding subunit VA249_31530 IPR003593 AAA+ ATPase domain VA249_31530 IPR003439 ABC transporter-like VA249_31530 IPR017871 ABC transporter, conserved site VA249_31540 IPR000415 Nitroreductase-like VA249_31540 IPR029479 Nitroreductase VA249_31540 IPR033878 Nitroreductase NfsB-like VA249_31550 IPR001972 Stomatin family VA249_31550 IPR018080 Band 7/stomatin-like, conserved site VA249_31550 IPR036013 Band 7/SPFH domain superfamily VA249_31550 IPR001107 Band 7 domain VA249_31590 IPR001633 EAL domain VA249_31590 IPR035919 EAL domain superfamily VA249_31590 IPR000160 GGDEF domain VA249_31590 IPR029787 Nucleotide cyclase VA249_31590 IPR000014 PAS domain VA249_31590 IPR035965 PAS domain superfamily VA249_31590 IPR005330 MHYT domain VA249_31600 IPR015387 LuxQ, periplasmic VA249_31600 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily VA249_31600 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VA249_31600 IPR029151 Periplasmic sensor-like domain superfamily VA249_31600 IPR035965 PAS domain superfamily VA249_31600 IPR011006 CheY-like superfamily VA249_31600 IPR003594 Histidine kinase/HSP90-like ATPase VA249_31600 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VA249_31600 IPR005467 Histidine kinase domain VA249_31600 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain VA249_31600 IPR001789 Signal transduction response regulator, receiver domain VA249_31640 IPR006694 Fatty acid hydroxylase VA249_31680 IPR004629 Glycosyl transferase WecB/TagA/CpsF VA249_31680 IPR028082 Periplasmic binding protein-like I VA249_31680 IPR023085 UDP-N-acetyl-D-mannosaminuronic acid transferase VA249_31700 IPR001296 Glycosyl transferase, family 1 VA249_31700 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain VA249_31770 IPR011004 Trimeric LpxA-like superfamily VA249_31770 IPR001451 Hexapeptide repeat VA249_31780 IPR017476 UDP-glucose/GDP-mannose dehydrogenase VA249_31780 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase VA249_31780 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal VA249_31780 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation VA249_31780 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily VA249_31780 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal VA249_31780 IPR036291 NAD(P)-binding domain superfamily VA249_31780 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily VA249_31790 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like VA249_31790 IPR032892 UDP-N-acetylglucosamine 2-epimerase WecB VA249_31790 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain VA249_31800 IPR003856 Polysaccharide chain length determinant N-terminal domain VA249_31800 IPR025669 AAA domain VA249_31800 IPR005702 Exopolysaccharide synthesis protein VA249_31800 IPR032807 Tyrosine kinase, G-rich domain VA249_31800 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_31830 IPR003362 Bacterial sugar transferase VA249_31830 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase VA249_31830 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ VA249_31880 IPR010049 MTA/SAH nucleosidase VA249_31880 IPR000845 Nucleoside phosphorylase domain VA249_31880 IPR035994 Nucleoside phosphorylase superfamily VA249_31890 IPR000160 GGDEF domain VA249_31890 IPR003660 HAMP domain VA249_31890 IPR029787 Nucleotide cyclase VA249_31890 IPR001633 EAL domain VA249_31890 IPR035919 EAL domain superfamily VA249_31900 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU VA249_31900 IPR023750 RbsD-like superfamily VA249_31900 IPR023064 D-ribose pyranase VA249_31910 IPR011701 Major facilitator superfamily VA249_31910 IPR020846 Major facilitator superfamily domain VA249_31910 IPR036259 MFS transporter superfamily VA249_31910 IPR005275 L-fucose permease FucP VA249_31930 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site VA249_31930 IPR011877 Ribokinase VA249_31930 IPR011611 Carbohydrate kinase PfkB VA249_31930 IPR002139 Ribokinase/fructokinase VA249_31930 IPR029056 Ribokinase-like VA249_31940 IPR011611 Carbohydrate kinase PfkB VA249_31940 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site VA249_31940 IPR011877 Ribokinase VA249_31940 IPR002139 Ribokinase/fructokinase VA249_31940 IPR029056 Ribokinase-like VA249_31950 IPR010982 Lambda repressor-like, DNA-binding domain superfamily VA249_31950 IPR028082 Periplasmic binding protein-like I VA249_31950 IPR000843 LacI-type HTH domain VA249_31970 IPR011789 Cu(I)-responsive transcriptional regulator VA249_31970 IPR009061 Putative DNA-binding domain superfamily VA249_31970 IPR000551 MerR-type HTH domain VA249_32020 IPR010020 Integral membrane protein, YccS/YhfK VA249_32020 IPR032692 Integral membrane protein YccS, N-terminal VA249_32020 IPR010019 Integral membrane protein, YccS VA249_32030 IPR022161 DNA helicase IV, N-terminal domain VA249_32030 IPR000212 DNA helicase, UvrD/REP type VA249_32030 IPR014016 UvrD-like helicase, ATP-binding domain VA249_32030 IPR014017 UvrD-like DNA helicase, C-terminal VA249_32030 IPR034739 UvrD/AddA helicase, N-terminal VA249_32030 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_32040 IPR036914 Methylglyoxal synthase-like domain superfamily VA249_32040 IPR011607 Methylglyoxal synthase-like domain VA249_32040 IPR018148 Methylglyoxal synthase, active site VA249_32040 IPR004363 Methylglyoxal synthase VA249_32050 IPR001761 Periplasmic binding protein/LacI sugar binding domain VA249_32050 IPR028082 Periplasmic binding protein-like I VA249_32050 IPR014301 TMAO reductase system, periplasmic protein TorT VA249_32060 IPR003594 Histidine kinase/HSP90-like ATPase VA249_32060 IPR003660 HAMP domain VA249_32060 IPR038188 TorS, sensor domain superfamily VA249_32060 IPR001789 Signal transduction response regulator, receiver domain VA249_32060 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain VA249_32060 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VA249_32060 IPR011006 CheY-like superfamily VA249_32060 IPR036641 HPT domain superfamily VA249_32060 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VA249_32060 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily VA249_32060 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain VA249_32060 IPR005467 Histidine kinase domain VA249_32060 IPR037952 Sensor histidine kinase TorS, sensor domain VA249_32090 IPR024607 Sulfatase, conserved site VA249_32090 IPR000917 Sulfatase, N-terminal VA249_32090 IPR017850 Alkaline-phosphatase-like, core domain superfamily VA249_32100 IPR024607 Sulfatase, conserved site VA249_32100 IPR017850 Alkaline-phosphatase-like, core domain superfamily VA249_32100 IPR000917 Sulfatase, N-terminal VA249_32110 IPR013026 Tetratricopeptide repeat-containing domain VA249_32110 IPR011990 Tetratricopeptide-like helical domain superfamily VA249_32110 IPR019734 Tetratricopeptide repeat VA249_32110 IPR022818 Photosystem I Ycf3, assembly VA249_32120 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_32120 IPR041628 ChlI/MoxR, AAA lid domain VA249_32120 IPR011703 ATPase, AAA-3 VA249_32150 IPR036465 von Willebrand factor A-like domain superfamily VA249_32150 IPR033881 von Willebrand factor domain BatA-type VA249_32150 IPR002035 von Willebrand factor, type A VA249_32180 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal VA249_32180 IPR016192 APOBEC/CMP deaminase, zinc-binding VA249_32180 IPR011549 Riboflavin-specific deaminase, C-terminal VA249_32180 IPR004794 Riboflavin biosynthesis protein RibD VA249_32180 IPR024072 Dihydrofolate reductase-like domain superfamily VA249_32180 IPR016193 Cytidine deaminase-like VA249_32180 IPR002125 Cytidine and deoxycytidylate deaminase domain VA249_32190 IPR036390 Winged helix DNA-binding domain superfamily VA249_32190 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_32190 IPR000847 Transcription regulator HTH, LysR VA249_32190 IPR005119 LysR, substrate-binding VA249_32200 IPR016052 Bacteriophage 933W, L0136 VA249_32200 IPR005220 Bacterial OB-fold VA249_32200 IPR036700 Bacterial OB-fold superfamily VA249_32230 IPR005532 Sulfatase-modifying factor enzyme VA249_32230 IPR042095 Sulfatase-modifying factor enzyme superfamily VA249_32230 IPR016187 C-type lectin fold VA249_32240 IPR023885 4Fe4S-binding SPASM domain VA249_32240 IPR013785 Aldolase-type TIM barrel VA249_32240 IPR034491 Anaerobic Ser-type sulfatase-maturating enzyme VA249_32240 IPR007197 Radical SAM VA249_32260 IPR014883 VRR-NUC domain VA249_32260 IPR011856 tRNA endonuclease-like domain superfamily VA249_32260 IPR033315 Fanconi-associated nuclease 1-like VA249_32260 IPR040603 Fanconi-associated nuclease 1, SAP domain VA249_32290 IPR018385 C4-dicarboxylate anaerobic carrier-like VA249_32290 IPR004669 C4-dicarboxylate anaerobic carrier VA249_32320 IPR011006 CheY-like superfamily VA249_32320 IPR001789 Signal transduction response regulator, receiver domain VA249_32320 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VA249_32320 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily VA249_32320 IPR003594 Histidine kinase/HSP90-like ATPase VA249_32320 IPR005467 Histidine kinase domain VA249_32320 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VA249_32320 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain VA249_32330 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain VA249_32330 IPR023179 GTP-binding protein, orthogonal bundle domain superfamily VA249_32330 IPR019991 GTP-binding protein, ribosome biogenesis VA249_32330 IPR006073 GTP binding domain VA249_32330 IPR016478 GTPase, MTG1 VA249_32330 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_32340 IPR029479 Nitroreductase VA249_32340 IPR000415 Nitroreductase-like VA249_32350 IPR001789 Signal transduction response regulator, receiver domain VA249_32350 IPR011006 CheY-like superfamily VA249_32350 IPR002545 CheW-like domain VA249_32350 IPR036061 CheW-like domain superfamily VA249_32350 IPR024181 Chemotaxis response regulator CheV VA249_32360 IPR012902 Prokaryotic N-terminal methylation site VA249_32380 IPR004626 RarD protein VA249_32380 IPR000620 EamA domain VA249_32410 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase VA249_32410 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily VA249_32420 IPR000390 Small multidrug resistance protein family VA249_32430 IPR000620 EamA domain VA249_32450 IPR016161 Aldehyde/histidinol dehydrogenase VA249_32450 IPR016163 Aldehyde dehydrogenase, C-terminal VA249_32450 IPR029510 Aldehyde dehydrogenase, glutamic acid active site VA249_32450 IPR016162 Aldehyde dehydrogenase, N-terminal VA249_32450 IPR015590 Aldehyde dehydrogenase domain VA249_32450 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent VA249_32470 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) VA249_32470 IPR042117 OMPP1/FadL/TodX superfamily VA249_32500 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal VA249_32500 IPR013785 Aldolase-type TIM barrel VA249_32510 IPR018146 Glyoxalase I, conserved site VA249_32510 IPR037523 Vicinal oxygen chelate (VOC) domain VA249_32510 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VA249_32510 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VA249_32510 IPR004361 Glyoxalase I VA249_32530 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type VA249_32530 IPR029052 Metallo-dependent phosphatase-like VA249_32530 IPR041796 Mre11 nuclease, N-terminal metallophosphatase domain VA249_32530 IPR004593 Nuclease SbcCD subunit D VA249_32530 IPR026843 Nuclease SbcCD subunit D, C-terminal domain VA249_32540 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_32540 IPR038729 Rad50/SbcC-type AAA domain VA249_32560 IPR011583 Chitinase II VA249_32560 IPR017853 Glycoside hydrolase superfamily VA249_32560 IPR001579 Glycoside hydrolase, chitinase active site VA249_32560 IPR001223 Glycoside hydrolase family 18, catalytic domain VA249_32600 IPR022272 Lipocalin family conserved site VA249_32600 IPR000566 Lipocalin/cytosolic fatty-acid binding domain VA249_32600 IPR022271 Lipocalin, ApoD type VA249_32600 IPR012674 Calycin VA249_32600 IPR002446 Lipocalin, bacterial VA249_32670 IPR001584 Integrase, catalytic core VA249_32670 IPR012337 Ribonuclease H-like superfamily VA249_32670 IPR036397 Ribonuclease H superfamily VA249_32700 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VA249_32700 IPR002052 DNA methylase, N-6 adenine-specific, conserved site VA249_32700 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily VA249_32700 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain VA249_32700 IPR003356 DNA methylase, adenine-specific VA249_32720 IPR029464 Type I restriction enzyme R protein, N-terminal domain VA249_32720 IPR001650 Helicase, C-terminal VA249_32720 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_32720 IPR006935 Helicase/UvrB, N-terminal VA249_32720 IPR014001 Helicase superfamily 1/2, ATP-binding domain VA249_32720 IPR013670 EcoEI R protein C-terminal domain VA249_32740 IPR014001 Helicase superfamily 1/2, ATP-binding domain VA249_32740 IPR001650 Helicase, C-terminal VA249_32740 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_32740 IPR038718 SNF2-like, N-terminal domain superfamily VA249_32740 IPR000330 SNF2-related, N-terminal domain VA249_32750 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 VA249_32750 IPR015421 Pyridoxal phosphate-dependent transferase, major domain VA249_32750 IPR003437 Glycine dehydrogenase (decarboxylating) VA249_32750 IPR015424 Pyridoxal phosphate-dependent transferase VA249_32750 IPR020581 Glycine cleavage system P protein VA249_32760 IPR000089 Biotin/lipoyl attachment VA249_32760 IPR002930 Glycine cleavage system H-protein VA249_32760 IPR033753 Glycine cleavage system H-protein/Simiate VA249_32760 IPR017453 Glycine cleavage system H-protein, subgroup VA249_32760 IPR011053 Single hybrid motif VA249_32770 IPR039429 Serine hydroxymethyltransferase-like domain VA249_32770 IPR015424 Pyridoxal phosphate-dependent transferase VA249_32770 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 VA249_32770 IPR015421 Pyridoxal phosphate-dependent transferase, major domain VA249_32770 IPR001085 Serine hydroxymethyltransferase VA249_32770 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site VA249_32790 IPR006223 Glycine cleavage system T protein VA249_32790 IPR022903 Glycine cleavage system T protein, bacteria VA249_32790 IPR028896 Aminomethyltransferase-like VA249_32790 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain VA249_32790 IPR006222 Aminomethyltransferase, folate-binding domain VA249_32790 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal VA249_32790 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 VA249_32810 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VA249_32810 IPR022936 Uncharacterised protein family UPF0194, membrane protein YbhG VA249_32830 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VA249_32830 IPR001036 Acriflavin resistance protein VA249_32850 IPR003352 Phosphotransferase system, EIIC VA249_32850 IPR006327 Phosphotransferase system, fructose IIC component VA249_32850 IPR003353 Phosphotransferase system, fructose-specific IIB subunit VA249_32850 IPR013011 Phosphotransferase system, EIIB component, type 2 VA249_32850 IPR003501 Phosphotransferase system, EIIB component, type 2/3 VA249_32850 IPR036095 PTS system IIB component-like superfamily VA249_32850 IPR013014 Phosphotransferase system, EIIC component, type 2 VA249_32860 IPR022463 Fructose 1-phosphate kinase VA249_32860 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site VA249_32860 IPR011611 Carbohydrate kinase PfkB VA249_32860 IPR029056 Ribokinase-like VA249_32860 IPR017583 Tagatose/fructose phosphokinase VA249_32870 IPR002114 Phosphotransferase system, HPr serine phosphorylation site VA249_32870 IPR035895 HPr-like superfamily VA249_32870 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site VA249_32870 IPR002178 PTS EIIA type-2 domain VA249_32870 IPR000032 Phosphocarrier protein HPr-like VA249_32870 IPR016152 Phosphotransferase/anion transporter VA249_32880 IPR012781 D-fructose-responsive transcription factor VA249_32880 IPR000843 LacI-type HTH domain VA249_32880 IPR010982 Lambda repressor-like, DNA-binding domain superfamily VA249_32880 IPR001761 Periplasmic binding protein/LacI sugar binding domain VA249_32880 IPR028082 Periplasmic binding protein-like I VA249_32940 IPR006686 Mechanosensitive ion channel MscS, conserved site VA249_32940 IPR010920 LSM domain superfamily VA249_32940 IPR006685 Mechanosensitive ion channel MscS VA249_32940 IPR011066 Mechanosensitive ion channel MscS, C-terminal VA249_32940 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 VA249_32940 IPR023408 Mechanosensitive ion channel MscS domain superfamily VA249_32970 IPR002771 Multiple antibiotic resistance (MarC)-related VA249_32980 IPR006669 Magnesium transporter MgtE VA249_32980 IPR038048 Magnesium transporter MgtE, transmembrane domain VA249_32980 IPR038076 MgtE, N-terminal domain superfamily VA249_32980 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily VA249_32980 IPR000644 CBS domain VA249_32980 IPR006667 SLC41 divalent cation transporters, integral membrane domain VA249_32980 IPR006668 Magnesium transporter, MgtE intracellular domain VA249_33000 IPR004713 Calcium/proton exchanger VA249_33000 IPR004837 Sodium/calcium exchanger membrane region VA249_33020 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain VA249_33020 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VA249_33020 IPR035906 MetI-like superfamily VA249_33030 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VA249_33030 IPR018313 Solute-binding protein family 3, conserved site VA249_33030 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter VA249_33030 IPR001320 Ionotropic glutamate receptor VA249_33040 IPR035906 MetI-like superfamily VA249_33040 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VA249_33040 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain VA249_33050 IPR017871 ABC transporter, conserved site VA249_33050 IPR003439 ABC transporter-like VA249_33050 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type VA249_33050 IPR003593 AAA+ ATPase domain VA249_33050 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_33060 IPR018211 Alcohol dehydrogenase, iron-type, conserved site VA249_33060 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA VA249_33070 IPR018060 DNA binding HTH domain, AraC-type VA249_33070 IPR009057 Homeobox-like domain superfamily VA249_33070 IPR009594 Transcription regulator HTH, AraC, N-terminal VA249_33080 IPR005835 Nucleotidyl transferase domain VA249_33080 IPR029044 Nucleotide-diphospho-sugar transferases VA249_33080 IPR011004 Trimeric LpxA-like superfamily VA249_33080 IPR011831 Glucose-1-phosphate adenylyltransferase VA249_33080 IPR005836 ADP-glucose pyrophosphorylase, conserved site VA249_33080 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial VA249_33090 IPR000559 Formate-tetrahydrofolate ligase, FTHFS VA249_33090 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site VA249_33090 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_33100 IPR011611 Carbohydrate kinase PfkB VA249_33100 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site VA249_33100 IPR029056 Ribokinase-like VA249_33130 IPR003607 HD/PDEase domain VA249_33130 IPR011006 CheY-like superfamily VA249_33130 IPR021800 Domain of unknown function DUF3369 VA249_33130 IPR037522 HD-GYP domain VA249_33130 IPR001789 Signal transduction response regulator, receiver domain VA249_33140 IPR023214 HAD superfamily VA249_33140 IPR041492 Haloacid dehalogenase-like hydrolase VA249_33140 IPR036412 HAD-like superfamily VA249_33140 IPR023733 Pyrophosphatase PpaX VA249_33140 IPR006439 HAD hydrolase, subfamily IA VA249_33140 IPR023198 Phosphoglycolate phosphatase-like, domain 2 VA249_33160 IPR001650 Helicase, C-terminal VA249_33160 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VA249_33160 IPR028622 ATP-dependent RNA helicase RhlE VA249_33160 IPR011545 DEAD/DEAH box helicase domain VA249_33160 IPR014014 RNA helicase, DEAD-box type, Q motif VA249_33160 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_33160 IPR014001 Helicase superfamily 1/2, ATP-binding domain VA249_33190 IPR016174 Di-haem cytochrome, transmembrane VA249_33190 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase VA249_33200 IPR023480 Uncharacterised protein family UPF0312/YceI VA249_33200 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily VA249_33200 IPR007372 Lipid/polyisoprenoid-binding, YceI-like VA249_33210 IPR023271 Aquaporin-like VA249_33210 IPR000292 Formate/nitrite transporter VA249_33210 IPR024002 Formate/nitrite transporter, conserved site VA249_33210 IPR023999 Formate transporter FocA, putative VA249_33220 IPR000847 Transcription regulator HTH, LysR VA249_33220 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_33220 IPR036390 Winged helix DNA-binding domain superfamily VA249_33220 IPR005119 LysR, substrate-binding VA249_33230 IPR009476 Protein of unknown function DUF1097 VA249_33240 IPR022602 Protein of unknown function DUF2813 VA249_33240 IPR034139 OLD protein-like, TOPRIM domain VA249_33240 IPR006171 TOPRIM domain VA249_33240 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_33250 IPR008334 5'-Nucleotidase, C-terminal VA249_33250 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type VA249_33250 IPR006179 5'-Nucleotidase/apyrase VA249_33250 IPR006146 5'-Nucleotidase, conserved site VA249_33250 IPR036907 5'-Nucleotidase, C-terminal domain superfamily VA249_33250 IPR029052 Metallo-dependent phosphatase-like VA249_33250 IPR006420 NAD pyrophosphatase/5-nucleotidase NadN VA249_33260 IPR022369 Integral membrane protein TerC, riboswitch-linked VA249_33260 IPR005496 Integral membrane protein TerC VA249_33300 IPR020009 Extracellular lipase, Pla-1/cef family VA249_33300 IPR029058 Alpha/Beta hydrolase fold VA249_33300 IPR025920 Bacterial virulence factor lipase, N-terminal domain VA249_33310 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) VA249_33310 IPR042117 OMPP1/FadL/TodX superfamily VA249_33340 IPR029069 HotDog domain superfamily VA249_33340 IPR003736 Phenylacetic acid degradation-related domain VA249_33340 IPR006683 Thioesterase domain VA249_33360 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain VA249_33360 IPR039424 Solute-binding protein family 5 VA249_33360 IPR000914 Solute-binding protein family 5 domain VA249_33360 IPR023767 Transcriptional regulator SgrR VA249_33420 IPR018253 DnaJ domain, conserved site VA249_33420 IPR008971 HSP40/DnaJ peptide-binding VA249_33420 IPR001305 Heat shock protein DnaJ, cysteine-rich domain VA249_33420 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily VA249_33420 IPR036869 Chaperone J-domain superfamily VA249_33420 IPR001623 DnaJ domain VA249_33420 IPR012724 Chaperone DnaJ VA249_33420 IPR002939 Chaperone DnaJ, C-terminal VA249_33440 IPR001633 EAL domain VA249_33440 IPR035919 EAL domain superfamily VA249_33440 IPR000160 GGDEF domain VA249_33440 IPR005330 MHYT domain VA249_33440 IPR029787 Nucleotide cyclase VA249_33440 IPR000014 PAS domain VA249_33440 IPR035965 PAS domain superfamily VA249_33450 IPR036291 NAD(P)-binding domain superfamily VA249_33450 IPR010758 Trans-2-enoyl-CoA reductase VA249_33450 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative VA249_33450 IPR024906 Enoyl reductase FAD binding domain VA249_33460 IPR013830 SGNH hydrolase-type esterase domain VA249_33460 IPR036514 SGNH hydrolase superfamily VA249_33460 IPR008265 Lipase, GDSL, active site VA249_33470 IPR017871 ABC transporter, conserved site VA249_33470 IPR003439 ABC transporter-like VA249_33470 IPR003593 AAA+ ATPase domain VA249_33470 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_33480 IPR038766 Membrane component of ABC transporter, predicted VA249_33500 IPR003778 Carboxyltransferase domain, subdomain A and B VA249_33500 IPR029000 Cyclophilin-like domain superfamily VA249_33510 IPR029000 Cyclophilin-like domain superfamily VA249_33510 IPR003833 Carboxyltransferase domain, subdomain C and D VA249_33510 IPR010016 KipI family VA249_33520 IPR005501 LamB/YcsF/PxpA-like VA249_33520 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel VA249_33530 IPR035965 PAS domain superfamily VA249_33530 IPR013656 PAS fold-4 VA249_33530 IPR013655 PAS fold-3 VA249_33530 IPR000700 PAS-associated, C-terminal VA249_33530 IPR029787 Nucleotide cyclase VA249_33530 IPR007895 MASE1 VA249_33530 IPR000160 GGDEF domain VA249_33530 IPR035919 EAL domain superfamily VA249_33530 IPR001633 EAL domain VA249_33530 IPR001610 PAC motif VA249_33530 IPR000014 PAS domain VA249_33540 IPR036291 NAD(P)-binding domain superfamily VA249_33540 IPR016040 NAD(P)-binding domain VA249_33540 IPR005886 UDP-glucose 4-epimerase VA249_33550 IPR037066 TonB-dependent receptor, plug domain superfamily VA249_33550 IPR010917 TonB-dependent receptor, conserved site VA249_33550 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily VA249_33550 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor VA249_33550 IPR006970 PT repeat VA249_33550 IPR012910 TonB-dependent receptor, plug domain VA249_33550 IPR039426 Vitamin B12 transporter BtuB-like VA249_33550 IPR000531 TonB-dependent receptor-like, beta-barrel VA249_33560 IPR005119 LysR, substrate-binding VA249_33560 IPR036390 Winged helix DNA-binding domain superfamily VA249_33560 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_33560 IPR000847 Transcription regulator HTH, LysR VA249_33570 IPR003781 CoA-binding VA249_33570 IPR013815 ATP-grasp fold, subdomain 1 VA249_33570 IPR011761 ATP-grasp fold VA249_33570 IPR016181 Acyl-CoA N-acyltransferase VA249_33570 IPR036291 NAD(P)-binding domain superfamily VA249_33570 IPR000182 GNAT domain VA249_33570 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain VA249_33570 IPR016102 Succinyl-CoA synthetase-like VA249_33590 IPR016185 Pre-ATP-grasp domain superfamily VA249_33590 IPR011095 D-alanine--D-alanine ligase, C-terminal VA249_33590 IPR005905 D-alanine--D-alanine ligase VA249_33590 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site VA249_33590 IPR013815 ATP-grasp fold, subdomain 1 VA249_33590 IPR011761 ATP-grasp fold VA249_33590 IPR011127 D-alanine--D-alanine ligase, N-terminal domain VA249_33610 IPR005872 Archaeal/bacterial translation initiation factor SUI1 VA249_33610 IPR036877 SUI1 domain superfamily VA249_33610 IPR001950 SUI1 domain VA249_33640 IPR005371 Uncharacterised protein family UPF0181 VA249_33670 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_33670 IPR039420 Transcriptional regulatory protein WalR-like VA249_33670 IPR001789 Signal transduction response regulator, receiver domain VA249_33670 IPR001867 OmpR/PhoB-type DNA-binding domain VA249_33670 IPR011006 CheY-like superfamily VA249_33690 IPR029035 DHS-like NAD/FAD-binding domain superfamily VA249_33690 IPR034300 NADP transhydrogenase beta-like domain VA249_33690 IPR012136 NADP transhydrogenase, beta subunit VA249_33700 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 VA249_33700 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal VA249_33700 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain VA249_33700 IPR036291 NAD(P)-binding domain superfamily VA249_33700 IPR026255 NAD(P) transhydrogenase, alpha subunit VA249_33700 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal VA249_33700 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 VA249_33730 IPR029787 Nucleotide cyclase VA249_33730 IPR000160 GGDEF domain VA249_33750 IPR013515 Phytochrome, central region VA249_33750 IPR003018 GAF domain VA249_33750 IPR001294 Phytochrome VA249_33750 IPR016132 Phytochrome chromophore attachment domain VA249_33750 IPR029787 Nucleotide cyclase VA249_33750 IPR035919 EAL domain superfamily VA249_33750 IPR000160 GGDEF domain VA249_33750 IPR029016 GAF-like domain superfamily VA249_33750 IPR001633 EAL domain VA249_33770 IPR003593 AAA+ ATPase domain VA249_33770 IPR003439 ABC transporter-like VA249_33770 IPR017871 ABC transporter, conserved site VA249_33770 IPR015852 ABC transporter, molybdenum import, ModC VA249_33770 IPR011868 Molybdate ABC transporter, ATP-binding protein VA249_33770 IPR004606 Molybdenum-pterin binding VA249_33770 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_33770 IPR005116 Transport-associated OB, type 1 VA249_33770 IPR008995 Molybdate/tungstate binding, C-terminal VA249_33780 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VA249_33780 IPR035906 MetI-like superfamily VA249_33780 IPR011867 Molybdate ABC transporter, permease protein VA249_33790 IPR041879 YvgL-like, substrate binding domain VA249_33790 IPR005950 Molybdate ABC transporter, substrate-binding protein VA249_33800 IPR005950 Molybdate ABC transporter, substrate-binding protein VA249_33810 IPR029062 Class I glutamine amidotransferase-like VA249_33810 IPR017929 CobB/CobQ glutamine amidotransferase VA249_33810 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain VA249_33810 IPR033949 Cobyric acid synthase, glutamine amidotransferase type 1 VA249_33810 IPR004459 Cobyric acid synthase CobQ VA249_33810 IPR011698 CobB/CobQ-like glutamine amidotransferase VA249_33810 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_33840 IPR016052 Bacteriophage 933W, L0136 VA249_33840 IPR005220 Bacterial OB-fold VA249_33840 IPR036700 Bacterial OB-fold superfamily VA249_33860 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX VA249_33860 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK VA249_33860 IPR021109 Aspartic peptidase domain superfamily VA249_33860 IPR013815 ATP-grasp fold, subdomain 1 VA249_33860 IPR013651 ATP-grasp fold, RimK-type VA249_33860 IPR011761 ATP-grasp fold VA249_33860 IPR041107 RimK, PreATP-grasp domain VA249_33870 IPR004839 Aminotransferase, class I/classII VA249_33870 IPR015421 Pyridoxal phosphate-dependent transferase, major domain VA249_33870 IPR000796 Aspartate/other aminotransferase VA249_33870 IPR015424 Pyridoxal phosphate-dependent transferase VA249_33870 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 VA249_33880 IPR018060 DNA binding HTH domain, AraC-type VA249_33880 IPR009057 Homeobox-like domain superfamily VA249_33880 IPR029062 Class I glutamine amidotransferase-like VA249_33880 IPR018062 HTH domain AraC-type, conserved site VA249_33880 IPR020449 Transcription regulator HTH, AraC- type VA249_33890 IPR002528 Multi antimicrobial extrusion protein VA249_33900 IPR034457 Organic radical-activating enzymes VA249_33900 IPR013785 Aldolase-type TIM barrel VA249_33900 IPR007197 Radical SAM VA249_33900 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic VA249_33900 IPR001989 Radical-activating enzyme, conserved site VA249_33910 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic VA249_33910 IPR001150 Glycine radical domain VA249_33910 IPR005144 ATP-cone domain VA249_33910 IPR019777 Formate C-acetyltransferase glycine radical, conserved site VA249_33950 IPR007272 Sulphur transport domain VA249_33980 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VA249_33980 IPR023753 FAD/NAD(P)-binding domain VA249_33980 IPR036188 FAD/NAD(P)-binding domain superfamily VA249_33980 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily VA249_33980 IPR017758 Coenzyme A disulphide reductase VA249_33980 IPR023536 Coenzyme A disulphide reductase, staphyolococci VA249_33990 IPR001387 Cro/C1-type helix-turn-helix domain VA249_33990 IPR010982 Lambda repressor-like, DNA-binding domain superfamily VA249_34000 IPR012893 HipA-like, C-terminal VA249_34000 IPR017508 HipA, N-terminal subdomain 1 VA249_34050 IPR002052 DNA methylase, N-6 adenine-specific, conserved site VA249_34050 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VA249_34050 IPR003356 DNA methylase, adenine-specific VA249_34050 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily VA249_34050 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain VA249_34060 IPR000055 Restriction endonuclease, type I, HsdS VA249_34070 IPR042174 DNA-binding RecF, domain 2 VA249_34070 IPR001238 DNA-binding, RecF VA249_34070 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_34070 IPR038729 Rad50/SbcC-type AAA domain VA249_34070 IPR018078 DNA-binding, RecF, conserved site VA249_34110 IPR014001 Helicase superfamily 1/2, ATP-binding domain VA249_34110 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_34110 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal VA249_34110 IPR004473 Restriction endonuclease, type I, HsdR VA249_34110 IPR040980 SWI2/SNF2 ATPase VA249_34110 IPR021810 Protein of unknown function DUF3387 VA249_34120 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_34120 IPR014001 Helicase superfamily 1/2, ATP-binding domain VA249_34120 IPR021810 Protein of unknown function DUF3387 VA249_34120 IPR040980 SWI2/SNF2 ATPase VA249_34120 IPR004473 Restriction endonuclease, type I, HsdR VA249_34120 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal VA249_34170 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_34170 IPR027094 Mitofusin family VA249_34170 IPR030381 Dynamin-type guanine nucleotide-binding (G) domain VA249_34170 IPR022812 Dynamin superfamily VA249_34250 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_34250 IPR003593 AAA+ ATPase domain VA249_34250 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein VA249_34250 IPR002611 IstB-like ATP-binding protein VA249_34260 IPR017895 Helix-turn-helix, IS408/IS1162 transposase-type VA249_34260 IPR001584 Integrase, catalytic core VA249_34260 IPR012337 Ribonuclease H-like superfamily VA249_34260 IPR036397 Ribonuclease H superfamily VA249_34280 IPR025668 Transposase DDE domain VA249_34370 IPR025827 Recombinase zinc beta ribbon domain VA249_34370 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily VA249_34370 IPR006119 Resolvase, N-terminal catalytic domain VA249_34370 IPR011109 DNA-binding recombinase domain VA249_34370 IPR038109 DNA-binding recombinase domain superfamily VA249_34380 IPR023536 Coenzyme A disulphide reductase, staphyolococci VA249_34380 IPR017758 Coenzyme A disulphide reductase VA249_34380 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily VA249_34380 IPR023753 FAD/NAD(P)-binding domain VA249_34380 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VA249_34380 IPR036188 FAD/NAD(P)-binding domain superfamily VA249_34410 IPR023512 Deaminase MtaD/DadD VA249_34410 IPR032466 Metal-dependent hydrolase VA249_34410 IPR006680 Amidohydrolase-related VA249_34410 IPR011059 Metal-dependent hydrolase, composite domain superfamily VA249_34430 IPR002549 Transmembrane protein TqsA-like VA249_34450 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VA249_34480 IPR016039 Thiolase-like VA249_34480 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal VA249_34480 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III VA249_34480 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 VA249_34490 IPR036249 Thioredoxin-like superfamily VA249_34490 IPR017937 Thioredoxin, conserved site VA249_34490 IPR013766 Thioredoxin domain VA249_34490 IPR005746 Thioredoxin VA249_34500 IPR023745 MSF-type transporter, YcaD VA249_34500 IPR011701 Major facilitator superfamily VA249_34500 IPR020846 Major facilitator superfamily domain VA249_34500 IPR036259 MFS transporter superfamily VA249_34510 IPR020483 Uncharacterised protein family YgbA VA249_34520 IPR016181 Acyl-CoA N-acyltransferase VA249_34520 IPR000182 GNAT domain VA249_34560 IPR035996 Tetrapyrrole methylase superfamily VA249_34560 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site VA249_34560 IPR006367 Sirohaem synthase, N-terminal VA249_34560 IPR019478 Sirohaem synthase, dimerisation domain VA249_34560 IPR028281 Siroheme synthase, central domain VA249_34560 IPR012409 Sirohaem synthase VA249_34560 IPR037115 Sirohaem synthase, dimerisation domain superfamily VA249_34560 IPR036291 NAD(P)-binding domain superfamily VA249_34560 IPR000878 Tetrapyrrole methylase VA249_34560 IPR014776 Tetrapyrrole methylase, subdomain 2 VA249_34560 IPR014777 Tetrapyrrole methylase, subdomain 1 VA249_34560 IPR006366 Uroporphyrin-III C-methyltransferase VA249_34570 IPR023999 Formate transporter FocA, putative VA249_34570 IPR024002 Formate/nitrite transporter, conserved site VA249_34570 IPR000292 Formate/nitrite transporter VA249_34570 IPR023271 Aquaporin-like VA249_34580 IPR017881 Nitrite reductase (NADH) small subunit VA249_34580 IPR012748 Rieske-like [2Fe-2S] domain, NirD-type VA249_34580 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily VA249_34590 IPR017121 Nitrite reductase [NAD(P)H], large subunit VA249_34590 IPR007419 BFD-like [2Fe-2S]-binding domain VA249_34590 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily VA249_34590 IPR036188 FAD/NAD(P)-binding domain superfamily VA249_34590 IPR023753 FAD/NAD(P)-binding domain VA249_34590 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain VA249_34590 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily VA249_34590 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB VA249_34590 IPR041575 NADH-rubredoxin oxidoreductase, C-terminal VA249_34590 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain VA249_34590 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site VA249_34600 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region VA249_34600 IPR000160 GGDEF domain VA249_34600 IPR029787 Nucleotide cyclase VA249_34640 IPR036318 FAD-binding, type PCMH-like superfamily VA249_34640 IPR016169 FAD-binding, type PCMH, subdomain 2 VA249_34640 IPR016173 D-lactate dehydrogenase, C-terminal subdomain 2 VA249_34640 IPR016164 FAD-linked oxidase-like, C-terminal VA249_34640 IPR016167 FAD-binding, type PCMH, subdomain 1 VA249_34640 IPR006094 FAD linked oxidase, N-terminal VA249_34640 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 VA249_34640 IPR016166 FAD-binding domain, PCMH-type VA249_34640 IPR015409 D-lactate dehydrogenase, membrane binding, C-terminal VA249_34640 IPR012256 D-lactate dehydrogenase VA249_34650 IPR036465 von Willebrand factor A-like domain superfamily VA249_34650 IPR008912 Uncharacterised protein family CoxE-like VA249_34650 IPR023481 Uncharacterised protein family ViaA VA249_34650 IPR002035 von Willebrand factor, type A VA249_34660 IPR003593 AAA+ ATPase domain VA249_34660 IPR011704 ATPase, dynein-related, AAA domain VA249_34660 IPR023671 ATPase RavA VA249_34660 IPR022547 ATPase, RavA, C-terminal VA249_34660 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_34660 IPR041538 ATPase RavA-like, AAA lid domain VA249_34680 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase VA249_34680 IPR015421 Pyridoxal phosphate-dependent transferase, major domain VA249_34680 IPR023603 Threonine aldolase VA249_34680 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 VA249_34680 IPR015424 Pyridoxal phosphate-dependent transferase VA249_34690 IPR009056 Cytochrome c-like domain VA249_34690 IPR036909 Cytochrome c-like domain superfamily VA249_34690 IPR008168 Cytochrome c, class IC VA249_34700 IPR018385 C4-dicarboxylate anaerobic carrier-like VA249_34720 IPR004812 Drug resistance transporter Bcr/CmlA subfamily VA249_34720 IPR020846 Major facilitator superfamily domain VA249_34720 IPR036259 MFS transporter superfamily VA249_34720 IPR004734 Multidrug resistance protein VA249_34720 IPR011701 Major facilitator superfamily VA249_34740 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_34780 IPR003439 ABC transporter-like VA249_34780 IPR017871 ABC transporter, conserved site VA249_34780 IPR036640 ABC transporter type 1, transmembrane domain superfamily VA249_34780 IPR011527 ABC transporter type 1, transmembrane domain VA249_34780 IPR003593 AAA+ ATPase domain VA249_34780 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_34830 IPR025110 AMP-binding enzyme, C-terminal domain VA249_34830 IPR020845 AMP-binding, conserved site VA249_34830 IPR042099 AMP-dependent synthetase-like superfamily VA249_34830 IPR000873 AMP-dependent synthetase/ligase VA249_34850 IPR002549 Transmembrane protein TqsA-like VA249_34930 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB VA249_34930 IPR007419 BFD-like [2Fe-2S]-binding domain VA249_34930 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily VA249_34930 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain VA249_34930 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain VA249_34930 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily VA249_34930 IPR041575 NADH-rubredoxin oxidoreductase, C-terminal VA249_34930 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily VA249_34930 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site VA249_34930 IPR023753 FAD/NAD(P)-binding domain VA249_34930 IPR012748 Rieske-like [2Fe-2S] domain, NirD-type VA249_34930 IPR036188 FAD/NAD(P)-binding domain superfamily VA249_34940 IPR003439 ABC transporter-like VA249_34940 IPR017871 ABC transporter, conserved site VA249_34940 IPR003593 AAA+ ATPase domain VA249_34940 IPR005890 Nitrate transport ATP-binding subunit C/D VA249_34940 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_34950 IPR005889 Nitrate transport permease VA249_34950 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VA249_34950 IPR035906 MetI-like superfamily VA249_34960 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_34960 IPR005890 Nitrate transport ATP-binding subunit C/D VA249_34960 IPR017871 ABC transporter, conserved site VA249_34960 IPR003439 ABC transporter-like VA249_34960 IPR003593 AAA+ ATPase domain VA249_34980 IPR005561 ANTAR domain VA249_34980 IPR011006 CheY-like superfamily VA249_34980 IPR013587 Nitrate/nitrite sensing protein VA249_34980 IPR010910 Nitrate/nitrite sensing protein, bacterial VA249_34980 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_34990 IPR029058 Alpha/Beta hydrolase fold VA249_34990 IPR002925 Dienelactone hydrolase VA249_35000 IPR005940 Anthranilate phosphoribosyl transferase VA249_35000 IPR000312 Glycosyl transferase, family 3 VA249_35000 IPR017459 Glycosyl transferase family 3, N-terminal domain VA249_35000 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily VA249_35000 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily VA249_35010 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site VA249_35010 IPR019478 Sirohaem synthase, dimerisation domain VA249_35010 IPR000878 Tetrapyrrole methylase VA249_35010 IPR035996 Tetrapyrrole methylase superfamily VA249_35010 IPR014776 Tetrapyrrole methylase, subdomain 2 VA249_35010 IPR006366 Uroporphyrin-III C-methyltransferase VA249_35010 IPR036291 NAD(P)-binding domain superfamily VA249_35010 IPR006367 Sirohaem synthase, N-terminal VA249_35010 IPR037115 Sirohaem synthase, dimerisation domain superfamily VA249_35010 IPR028281 Siroheme synthase, central domain VA249_35010 IPR012409 Sirohaem synthase VA249_35010 IPR014777 Tetrapyrrole methylase, subdomain 1 VA249_35020 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site VA249_35020 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain VA249_35020 IPR006656 Molybdopterin oxidoreductase VA249_35020 IPR006657 Molybdopterin dinucleotide-binding domain VA249_35020 IPR009010 Aspartate decarboxylase-like domain superfamily VA249_35040 IPR004694 Hydroxy amino acid transporter VA249_35040 IPR018227 Amino acid/polyamine transporter 2 VA249_35060 IPR002884 P domain VA249_35060 IPR008979 Galactose-binding-like domain superfamily VA249_35060 IPR000209 Peptidase S8/S53 domain VA249_35060 IPR036852 Peptidase S8/S53 domain superfamily VA249_35060 IPR023827 Peptidase S8, subtilisin, Asp-active site VA249_35060 IPR023828 Peptidase S8, subtilisin, Ser-active site VA249_35060 IPR015500 Peptidase S8, subtilisin-related VA249_35080 IPR017850 Alkaline-phosphatase-like, core domain superfamily VA249_35080 IPR018299 Alkaline phosphatase, active site VA249_35080 IPR001952 Alkaline phosphatase VA249_35090 IPR041610 ArlS, sensor domain VA249_35090 IPR003660 HAMP domain VA249_35090 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VA249_35090 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily VA249_35090 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain VA249_35090 IPR003594 Histidine kinase/HSP90-like ATPase VA249_35090 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VA249_35090 IPR005467 Histidine kinase domain VA249_35100 IPR011006 CheY-like superfamily VA249_35100 IPR001789 Signal transduction response regulator, receiver domain VA249_35100 IPR039420 Transcriptional regulatory protein WalR-like VA249_35100 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_35100 IPR001867 OmpR/PhoB-type DNA-binding domain VA249_35130 IPR009057 Homeobox-like domain superfamily VA249_35130 IPR038965 Transposase InsF-like VA249_35150 IPR042054 YegD-like VA249_35150 IPR013126 Heat shock protein 70 family VA249_35150 IPR018181 Heat shock protein 70, conserved site VA249_35180 IPR001017 Dehydrogenase, E1 component VA249_35180 IPR017596 Pyruvate dehydrogenase E1 component subunit alpha/BCKADH E1-alpha VA249_35180 IPR029061 Thiamin diphosphate-binding fold VA249_35190 IPR033248 Transketolase, C-terminal domain VA249_35190 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II VA249_35190 IPR029061 Thiamin diphosphate-binding fold VA249_35190 IPR005475 Transketolase-like, pyrimidine-binding domain VA249_35200 IPR011053 Single hybrid motif VA249_35200 IPR004167 Peripheral subunit-binding domain VA249_35200 IPR036625 E3-binding domain superfamily VA249_35200 IPR000089 Biotin/lipoyl attachment VA249_35200 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain VA249_35200 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site VA249_35200 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily VA249_35210 IPR029035 DHS-like NAD/FAD-binding domain superfamily VA249_35210 IPR001308 Electron transfer flavoprotein alpha subunit/FixB VA249_35210 IPR033947 Electron transfer flavoprotein, alpha subunit, N-terminal VA249_35210 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal VA249_35210 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site VA249_35210 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VA249_35210 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal VA249_35220 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VA249_35220 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site VA249_35220 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal VA249_35220 IPR033948 Electron transfer flavoprotein, beta subunit, N-terminal VA249_35220 IPR012255 Electron transfer flavoprotein, beta subunit VA249_35230 IPR040156 Electron transfer flavoprotein-ubiquinone oxidoreductase VA249_35230 IPR036188 FAD/NAD(P)-binding domain superfamily VA249_35230 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VA249_35240 IPR040077 Glutathione S-transferase Theta, C-terminal VA249_35240 IPR036249 Thioredoxin-like superfamily VA249_35240 IPR040079 Glutathione Transferase family VA249_35240 IPR004045 Glutathione S-transferase, N-terminal VA249_35240 IPR004046 Glutathione S-transferase, C-terminal VA249_35240 IPR010987 Glutathione S-transferase, C-terminal-like VA249_35240 IPR036282 Glutathione S-transferase, C-terminal domain superfamily VA249_35250 IPR005119 LysR, substrate-binding VA249_35250 IPR000847 Transcription regulator HTH, LysR VA249_35250 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_35250 IPR036390 Winged helix DNA-binding domain superfamily VA249_35260 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain VA249_35260 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VA249_35260 IPR035906 MetI-like superfamily VA249_35270 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VA249_35270 IPR035906 MetI-like superfamily VA249_35270 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain VA249_35280 IPR001320 Ionotropic glutamate receptor VA249_35280 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter VA249_35280 IPR018313 Solute-binding protein family 3, conserved site VA249_35280 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VA249_35290 IPR003439 ABC transporter-like VA249_35290 IPR003593 AAA+ ATPase domain VA249_35290 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type VA249_35290 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_35290 IPR017871 ABC transporter, conserved site VA249_35320 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal VA249_35320 IPR023753 FAD/NAD(P)-binding domain VA249_35320 IPR013785 Aldolase-type TIM barrel VA249_35320 IPR036188 FAD/NAD(P)-binding domain superfamily VA249_35330 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase VA249_35330 IPR036291 NAD(P)-binding domain superfamily VA249_35330 IPR020904 Short-chain dehydrogenase/reductase, conserved site VA249_35330 IPR002347 Short-chain dehydrogenase/reductase SDR VA249_35340 IPR011548 3-hydroxyisobutyrate dehydrogenase VA249_35340 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site VA249_35340 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily VA249_35340 IPR013328 6-phosphogluconate dehydrogenase, domain 2 VA249_35340 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding VA249_35340 IPR015815 3-hydroxyisobutyrate dehydrogenase-related VA249_35340 IPR036291 NAD(P)-binding domain superfamily VA249_35340 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain VA249_35350 IPR015815 3-hydroxyisobutyrate dehydrogenase-related VA249_35350 IPR011548 3-hydroxyisobutyrate dehydrogenase VA249_35350 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding VA249_35350 IPR036291 NAD(P)-binding domain superfamily VA249_35350 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily VA249_35350 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site VA249_35350 IPR013328 6-phosphogluconate dehydrogenase, domain 2 VA249_35350 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain VA249_35360 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site VA249_35360 IPR001753 Enoyl-CoA hydratase/isomerase VA249_35360 IPR014748 Enoyl-CoA hydratase, C-terminal VA249_35360 IPR029045 ClpP/crotonase-like domain superfamily VA249_35370 IPR014748 Enoyl-CoA hydratase, C-terminal VA249_35370 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site VA249_35370 IPR001753 Enoyl-CoA hydratase/isomerase VA249_35370 IPR029045 ClpP/crotonase-like domain superfamily VA249_35380 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal VA249_35380 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily VA249_35380 IPR006089 Acyl-CoA dehydrogenase, conserved site VA249_35380 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain VA249_35380 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily VA249_35380 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal VA249_35380 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal VA249_35390 IPR016162 Aldehyde dehydrogenase, N-terminal VA249_35390 IPR016160 Aldehyde dehydrogenase, cysteine active site VA249_35390 IPR016163 Aldehyde dehydrogenase, C-terminal VA249_35390 IPR016161 Aldehyde/histidinol dehydrogenase VA249_35390 IPR010061 Methylmalonate-semialdehyde dehydrogenase VA249_35390 IPR015590 Aldehyde dehydrogenase domain VA249_35400 IPR016039 Thiolase-like VA249_35400 IPR020610 Thiolase, active site VA249_35400 IPR020617 Thiolase, C-terminal VA249_35400 IPR020613 Thiolase, conserved site VA249_35400 IPR020616 Thiolase, N-terminal VA249_35400 IPR002155 Thiolase VA249_35400 IPR020615 Thiolase, acyl-enzyme intermediate active site VA249_35410 IPR020615 Thiolase, acyl-enzyme intermediate active site VA249_35410 IPR020616 Thiolase, N-terminal VA249_35410 IPR020613 Thiolase, conserved site VA249_35410 IPR002155 Thiolase VA249_35410 IPR016039 Thiolase-like VA249_35410 IPR020610 Thiolase, active site VA249_35410 IPR020617 Thiolase, C-terminal VA249_35420 IPR000551 MerR-type HTH domain VA249_35420 IPR009061 Putative DNA-binding domain superfamily VA249_35420 IPR011789 Cu(I)-responsive transcriptional regulator VA249_35420 IPR015358 Transcription regulator MerR, DNA binding VA249_35430 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain VA249_35430 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily VA249_35430 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal VA249_35430 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal VA249_35430 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal VA249_35430 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily VA249_35430 IPR006089 Acyl-CoA dehydrogenase, conserved site VA249_35440 IPR034733 Acetyl-CoA carboxylase VA249_35440 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal VA249_35440 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal VA249_35440 IPR029045 ClpP/crotonase-like domain superfamily VA249_35450 IPR029045 ClpP/crotonase-like domain superfamily VA249_35450 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site VA249_35450 IPR001753 Enoyl-CoA hydratase/isomerase VA249_35460 IPR013785 Aldolase-type TIM barrel VA249_35460 IPR000891 Pyruvate carboxyltransferase VA249_35460 IPR000138 Hydroxymethylglutaryl-CoA lyase, active site VA249_35480 IPR036909 Cytochrome c-like domain superfamily VA249_35480 IPR009056 Cytochrome c-like domain VA249_35480 IPR008168 Cytochrome c, class IC VA249_35490 IPR036927 Cytochrome c oxidase-like, subunit I superfamily VA249_35490 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site VA249_35490 IPR000883 Cytochrome c oxidase subunit I VA249_35490 IPR004677 Cytochrome c oxidase cbb3-type, subunit I VA249_35490 IPR023616 Cytochrome c oxidase-like, subunit I domain VA249_35510 IPR014353 Membrane-bound alcohol dehydrogenase, cytochrome c subunit VA249_35510 IPR036909 Cytochrome c-like domain superfamily VA249_35510 IPR008168 Cytochrome c, class IC VA249_35510 IPR009056 Cytochrome c-like domain VA249_35520 IPR004372 Acetate/propionate kinase VA249_35520 IPR000890 Aliphatic acid kinase, short-chain VA249_35520 IPR023865 Aliphatic acid kinase, short-chain, conserved site VA249_35530 IPR028618 ATP-dependent RNA helicase DeaD VA249_35530 IPR014014 RNA helicase, DEAD-box type, Q motif VA249_35530 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VA249_35530 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_35530 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily VA249_35530 IPR014001 Helicase superfamily 1/2, ATP-binding domain VA249_35530 IPR001650 Helicase, C-terminal VA249_35530 IPR034415 CsdA, RNA recognition motif VA249_35530 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain VA249_35530 IPR011545 DEAD/DEAH box helicase domain VA249_35540 IPR038717 Tc1-like transposase, DDE domain VA249_35560 IPR003029 S1 domain VA249_35560 IPR022966 Ribonuclease II/R, conserved site VA249_35560 IPR011804 Ribonuclease II VA249_35560 IPR004476 Ribonuclease II/ribonuclease R VA249_35560 IPR012340 Nucleic acid-binding, OB-fold VA249_35560 IPR011129 Cold shock domain VA249_35560 IPR013223 Ribonuclease B, N-terminal OB domain VA249_35560 IPR001900 Ribonuclease II/R VA249_35570 IPR017853 Glycoside hydrolase superfamily VA249_35570 IPR009057 Homeobox-like domain superfamily VA249_35570 IPR037923 Transcription regulator HTH-like VA249_35570 IPR018060 DNA binding HTH domain, AraC-type VA249_35570 IPR020449 Transcription regulator HTH, AraC- type VA249_35580 IPR024370 PBP domain VA249_35590 IPR039375 Nodulation protein N-like VA249_35590 IPR029069 HotDog domain superfamily VA249_35590 IPR002539 MaoC-like dehydratase domain VA249_35630 IPR018062 HTH domain AraC-type, conserved site VA249_35630 IPR018060 DNA binding HTH domain, AraC-type VA249_35630 IPR020449 Transcription regulator HTH, AraC- type VA249_35630 IPR035418 Transcription regulator HTH, AraC- type, ligand binding domain-like VA249_35630 IPR009057 Homeobox-like domain superfamily VA249_35640 IPR003593 AAA+ ATPase domain VA249_35640 IPR003439 ABC transporter-like VA249_35640 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_35640 IPR017882 Zinc import ATP-binding protein ZnuC VA249_35760 IPR006118 Recombinase, conserved site VA249_35760 IPR006119 Resolvase, N-terminal catalytic domain VA249_35760 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily VA249_35760 IPR006120 Resolvase, HTH domain VA249_35770 IPR014710 RmlC-like jelly roll fold VA249_35770 IPR010982 Lambda repressor-like, DNA-binding domain superfamily VA249_35770 IPR001387 Cro/C1-type helix-turn-helix domain VA249_35770 IPR011051 RmlC-like cupin domain superfamily VA249_35770 IPR013096 Cupin 2, conserved barrel VA249_35790 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VA249_35840 IPR038965 Transposase InsF-like VA249_35840 IPR009057 Homeobox-like domain superfamily VA249_35850 IPR025161 Putative transposase IS4/IS5 family VA249_35870 IPR000160 GGDEF domain VA249_35870 IPR013656 PAS fold-4 VA249_35870 IPR035965 PAS domain superfamily VA249_35870 IPR000700 PAS-associated, C-terminal VA249_35870 IPR029787 Nucleotide cyclase VA249_35870 IPR000014 PAS domain VA249_35880 IPR006043 Xanthine/uracil/vitamin C permease VA249_35890 IPR003593 AAA+ ATPase domain VA249_35890 IPR003439 ABC transporter-like VA249_35890 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_35930 IPR014001 Helicase superfamily 1/2, ATP-binding domain VA249_35930 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_35930 IPR014014 RNA helicase, DEAD-box type, Q motif VA249_35930 IPR001650 Helicase, C-terminal VA249_35930 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VA249_35930 IPR028622 ATP-dependent RNA helicase RhlE VA249_35930 IPR011545 DEAD/DEAH box helicase domain VA249_35940 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_35940 IPR003495 CobW/HypB/UreG, nucleotide-binding domain VA249_35940 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal VA249_35960 IPR000816 Peptidase C15, pyroglutamyl peptidase I VA249_35960 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like VA249_35960 IPR033693 Pyroglutamyl peptidase I, Glu active site VA249_35960 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily VA249_35960 IPR029762 Pyroglutamyl peptidase I, bacterial-type VA249_35960 IPR033694 Pyroglutamyl peptidase I, Cys active site VA249_36000 IPR018648 Protein of unknown function DUF2076 VA249_36020 IPR025161 Putative transposase IS4/IS5 family VA249_36040 IPR024530 Putative quorum-sensing-regulated virulence factor VA249_36080 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily VA249_36080 IPR001533 Pterin 4 alpha carbinolamine dehydratase VA249_36090 IPR019774 Aromatic amino acid hydroxylase, C-terminal VA249_36090 IPR001273 Aromatic amino acid hydroxylase VA249_36090 IPR018301 Aromatic amino acid hydroxylase, iron/copper binding site VA249_36090 IPR036951 Aromatic amino acid hydroxylase superfamily VA249_36090 IPR036329 Aromatic amino acid monoxygenase, C-terminal domain superfamily VA249_36090 IPR005960 Phenylalanine-4-hydroxylase, monomeric form VA249_36100 IPR042099 AMP-dependent synthetase-like superfamily VA249_36100 IPR000873 AMP-dependent synthetase/ligase VA249_36100 IPR005914 Acetoacetyl-CoA synthase VA249_36100 IPR025110 AMP-binding enzyme, C-terminal domain VA249_36100 IPR020845 AMP-binding, conserved site VA249_36110 IPR010233 Ubiquinone biosynthesis O-methyltransferase VA249_36110 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VA249_36120 IPR000847 Transcription regulator HTH, LysR VA249_36120 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_36120 IPR036390 Winged helix DNA-binding domain superfamily VA249_36140 IPR000620 EamA domain VA249_36160 IPR029062 Class I glutamine amidotransferase-like VA249_36160 IPR026041 Glyoxalase ElbB VA249_36170 IPR039697 Iron-type alcohol dehydrogenase-like VA249_36170 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA VA249_36170 IPR018211 Alcohol dehydrogenase, iron-type, conserved site VA249_36180 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase VA249_36180 IPR011042 Six-bladed beta-propeller, TolB-like VA249_36180 IPR012938 Glucose/Sorbosone dehydrogenase VA249_36200 IPR023188 DNA-binding protein Dps, conserved site VA249_36200 IPR002177 DNA-binding protein Dps VA249_36200 IPR012347 Ferritin-like VA249_36200 IPR009078 Ferritin-like superfamily VA249_36200 IPR008331 Ferritin/DPS protein domain VA249_36210 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VA249_36210 IPR033480 Single Cache domain 2 VA249_36210 IPR004090 Chemotaxis methyl-accepting receptor VA249_36210 IPR003660 HAMP domain VA249_36230 IPR003593 AAA+ ATPase domain VA249_36230 IPR003838 ABC transporter permease protein domain VA249_36230 IPR003439 ABC transporter-like VA249_36230 IPR017871 ABC transporter, conserved site VA249_36230 IPR017911 ABC transporter, macrolide export, ATP-binding domain VA249_36230 IPR025857 MacB-like periplasmic core domain VA249_36230 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_36240 IPR017871 ABC transporter, conserved site VA249_36240 IPR017911 ABC transporter, macrolide export, ATP-binding domain VA249_36240 IPR025857 MacB-like periplasmic core domain VA249_36240 IPR003439 ABC transporter-like VA249_36240 IPR003838 ABC transporter permease protein domain VA249_36240 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_36240 IPR003593 AAA+ ATPase domain VA249_36280 IPR012340 Nucleic acid-binding, OB-fold VA249_36280 IPR011129 Cold shock domain VA249_36280 IPR012156 Cold shock, CspA VA249_36280 IPR002059 Cold-shock protein, DNA-binding VA249_36280 IPR019844 Cold-shock (CSD) domain VA249_36340 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily VA249_36340 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain VA249_36340 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal VA249_36390 IPR016032 Signal transduction response regulator, C-terminal effector VA249_36390 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_36390 IPR011006 CheY-like superfamily VA249_36390 IPR001789 Signal transduction response regulator, receiver domain VA249_36390 IPR000792 Transcription regulator LuxR, C-terminal VA249_36400 IPR023214 HAD superfamily VA249_36400 IPR041492 Haloacid dehalogenase-like hydrolase VA249_36400 IPR023198 Phosphoglycolate phosphatase-like, domain 2 VA249_36400 IPR036412 HAD-like superfamily VA249_36400 IPR010976 Beta-phosphoglucomutase hydrolase VA249_36400 IPR006439 HAD hydrolase, subfamily IA VA249_36410 IPR000352 Peptide chain release factor class I VA249_36420 IPR003660 HAMP domain VA249_36420 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain VA249_36420 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VA249_36420 IPR000727 Target SNARE coiled-coil homology domain VA249_36420 IPR004090 Chemotaxis methyl-accepting receptor VA249_36430 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 VA249_36430 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VA249_36430 IPR001036 Acriflavin resistance protein VA249_36440 IPR006143 RND efflux pump, membrane fusion protein VA249_36440 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VA249_36450 IPR035105 Deoxycytidylate deaminase domain VA249_36450 IPR015517 Deoxycytidylate deaminase-related VA249_36450 IPR016192 APOBEC/CMP deaminase, zinc-binding VA249_36450 IPR016193 Cytidine deaminase-like VA249_36450 IPR002125 Cytidine and deoxycytidylate deaminase domain VA249_36450 IPR016473 Deoxycytidylate deaminase VA249_36460 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site VA249_36460 IPR036264 Bacterial exopeptidase dimerisation domain VA249_36460 IPR002933 Peptidase M20 VA249_36460 IPR011650 Peptidase M20, dimerisation domain VA249_36460 IPR010161 Peptidase M20B, tripeptide aminopeptidase VA249_36490 IPR000792 Transcription regulator LuxR, C-terminal VA249_36490 IPR001789 Signal transduction response regulator, receiver domain VA249_36490 IPR016032 Signal transduction response regulator, C-terminal effector VA249_36490 IPR011006 CheY-like superfamily VA249_36500 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain VA249_36500 IPR003660 HAMP domain VA249_36500 IPR003594 Histidine kinase/HSP90-like ATPase VA249_36500 IPR005467 Histidine kinase domain VA249_36500 IPR029095 NarX-like, N-terminal VA249_36500 IPR042295 NarX-like, N-terminal domain superfamily VA249_36500 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing VA249_36500 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VA249_36520 IPR006657 Molybdopterin dinucleotide-binding domain VA249_36520 IPR009010 Aspartate decarboxylase-like domain superfamily VA249_36520 IPR041957 Nitrate reductase NapA-like, molybdopterin-binding domain VA249_36520 IPR006656 Molybdopterin oxidoreductase VA249_36520 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain VA249_36520 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site VA249_36520 IPR010051 Periplasmic nitrate reductase, large subunit VA249_36520 IPR006311 Twin-arginine translocation pathway, signal sequence VA249_36530 IPR011031 Multihaem cytochrome VA249_36530 IPR036280 Multiheme cytochrome superfamily VA249_36530 IPR005591 Nitrate reductase cytochrome c-type subunit NapB VA249_36540 IPR036280 Multiheme cytochrome superfamily VA249_36540 IPR011031 Multihaem cytochrome VA249_36540 IPR005126 NapC/NirT cytochrome c, N-terminal VA249_36540 IPR038266 NapC/NirT cytochrome c superfamily VA249_36540 IPR011885 Periplasmic nitrate reductase c-type cytochrome, NapC/NirT VA249_36540 IPR024717 Denitrification system component NapC/NirT/NrfH VA249_36560 IPR029058 Alpha/Beta hydrolase fold VA249_36560 IPR000073 Alpha/beta hydrolase fold-1 VA249_36560 IPR010963 Poly(R)-hydroxyalkanoic acid synthase, class I VA249_36560 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain VA249_36580 IPR020615 Thiolase, acyl-enzyme intermediate active site VA249_36580 IPR020617 Thiolase, C-terminal VA249_36580 IPR020613 Thiolase, conserved site VA249_36580 IPR020616 Thiolase, N-terminal VA249_36580 IPR020610 Thiolase, active site VA249_36580 IPR016039 Thiolase-like VA249_36580 IPR002155 Thiolase VA249_36590 IPR020904 Short-chain dehydrogenase/reductase, conserved site VA249_36590 IPR036291 NAD(P)-binding domain superfamily VA249_36590 IPR011283 Acetoacetyl-CoA reductase VA249_36590 IPR002347 Short-chain dehydrogenase/reductase SDR VA249_36600 IPR005665 Protein-export membrane protein SecF, bacterial VA249_36600 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site VA249_36600 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial VA249_36600 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VA249_36610 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site VA249_36610 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VA249_36610 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial VA249_36610 IPR027398 SecD export protein N-terminal TM domain VA249_36610 IPR005791 Protein translocase subunit SecD VA249_36610 IPR001036 Acriflavin resistance protein VA249_36650 IPR036390 Winged helix DNA-binding domain superfamily VA249_36650 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_36650 IPR019885 Transcription regulator HTH, AsnC-type, conserved site VA249_36650 IPR000485 AsnC-type HTH domain VA249_36650 IPR019888 Transcription regulator AsnC-type VA249_36650 IPR011008 Dimeric alpha-beta barrel VA249_36650 IPR011991 ArsR-like helix-turn-helix domain VA249_36650 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VA249_36670 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain VA249_36670 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily VA249_36670 IPR015387 LuxQ, periplasmic VA249_36670 IPR003594 Histidine kinase/HSP90-like ATPase VA249_36670 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VA249_36670 IPR005467 Histidine kinase domain VA249_36670 IPR011006 CheY-like superfamily VA249_36670 IPR029151 Periplasmic sensor-like domain superfamily VA249_36670 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VA249_36670 IPR001789 Signal transduction response regulator, receiver domain VA249_36680 IPR025997 Periplasmic binding protein VA249_36680 IPR028082 Periplasmic binding protein-like I VA249_36690 IPR035901 GIY-YIG endonuclease superfamily VA249_36690 IPR000305 GIY-YIG endonuclease VA249_36700 IPR036390 Winged helix DNA-binding domain superfamily VA249_36700 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_36700 IPR007432 Protein of unknown function DUF480 VA249_36720 IPR007458 Protein of unknown function DUF496 VA249_36730 IPR002528 Multi antimicrobial extrusion protein VA249_36750 IPR000683 Oxidoreductase, N-terminal VA249_36750 IPR036291 NAD(P)-binding domain superfamily VA249_36760 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain VA249_36760 IPR036291 NAD(P)-binding domain superfamily VA249_36760 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site VA249_36760 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain VA249_36760 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family VA249_36760 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I VA249_36790 IPR005119 LysR, substrate-binding VA249_36790 IPR000847 Transcription regulator HTH, LysR VA249_36790 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_36790 IPR036390 Winged helix DNA-binding domain superfamily VA249_36810 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VA249_36810 IPR001036 Acriflavin resistance protein VA249_36810 IPR022831 Multidrug resistance protein MdtB VA249_36840 IPR036390 Winged helix DNA-binding domain superfamily VA249_36840 IPR015424 Pyridoxal phosphate-dependent transferase VA249_36840 IPR015421 Pyridoxal phosphate-dependent transferase, major domain VA249_36840 IPR000524 Transcription regulator HTH, GntR VA249_36840 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_36840 IPR004839 Aminotransferase, class I/classII VA249_36880 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VA249_36890 IPR011009 Protein kinase-like domain superfamily VA249_36890 IPR004147 UbiB domain VA249_36890 IPR010232 Probable protein kinase UbiB VA249_36890 IPR000719 Protein kinase domain VA249_36900 IPR000644 CBS domain VA249_36900 IPR006667 SLC41 divalent cation transporters, integral membrane domain VA249_36900 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily VA249_36900 IPR038076 MgtE, N-terminal domain superfamily VA249_36900 IPR038048 Magnesium transporter MgtE, transmembrane domain VA249_36900 IPR006669 Magnesium transporter MgtE VA249_36900 IPR006668 Magnesium transporter, MgtE intracellular domain VA249_36910 IPR030191 Cytosine permease VA249_36910 IPR001248 Purine-cytosine permease VA249_36910 IPR038271 Purine-cytosine permease superfamily VA249_36920 IPR013108 Amidohydrolase 3 VA249_36920 IPR011059 Metal-dependent hydrolase, composite domain superfamily VA249_36920 IPR032466 Metal-dependent hydrolase VA249_36950 IPR003607 HD/PDEase domain VA249_36950 IPR006674 HD domain VA249_36970 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily VA249_36970 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB VA249_36980 IPR036249 Thioredoxin-like superfamily VA249_36980 IPR000889 Glutathione peroxidase VA249_36980 IPR029759 Glutathione peroxidase active site VA249_37000 IPR036249 Thioredoxin-like superfamily VA249_37000 IPR013766 Thioredoxin domain VA249_37000 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL VA249_37000 IPR001853 DSBA-like thioredoxin domain VA249_37030 IPR020904 Short-chain dehydrogenase/reductase, conserved site VA249_37030 IPR002347 Short-chain dehydrogenase/reductase SDR VA249_37030 IPR036291 NAD(P)-binding domain superfamily VA249_37050 IPR016032 Signal transduction response regulator, C-terminal effector VA249_37050 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_37050 IPR039420 Transcriptional regulatory protein WalR-like VA249_37050 IPR001789 Signal transduction response regulator, receiver domain VA249_37050 IPR001867 OmpR/PhoB-type DNA-binding domain VA249_37050 IPR011006 CheY-like superfamily VA249_37060 IPR003660 HAMP domain VA249_37060 IPR003594 Histidine kinase/HSP90-like ATPase VA249_37060 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VA249_37060 IPR005467 Histidine kinase domain VA249_37060 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain VA249_37060 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily VA249_37060 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VA249_37080 IPR017850 Alkaline-phosphatase-like, core domain superfamily VA249_37080 IPR000917 Sulfatase, N-terminal VA249_37080 IPR012549 Phosphoethanolamine transferase, N-terminal VA249_37080 IPR040423 Phosphoethanolamine transferase VA249_37100 IPR004734 Multidrug resistance protein VA249_37100 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG VA249_37100 IPR005829 Sugar transporter, conserved site VA249_37100 IPR036259 MFS transporter superfamily VA249_37100 IPR020846 Major facilitator superfamily domain VA249_37100 IPR011701 Major facilitator superfamily VA249_37140 IPR005119 LysR, substrate-binding VA249_37140 IPR000847 Transcription regulator HTH, LysR VA249_37140 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_37140 IPR036390 Winged helix DNA-binding domain superfamily VA249_37150 IPR029039 Flavoprotein-like superfamily VA249_37150 IPR003680 Flavodoxin-like fold VA249_37160 IPR006036 Potassium uptake protein TrkA VA249_37160 IPR038770 Sodium/solute symporter superfamily VA249_37160 IPR023941 Glutathione-regulated potassium-efflux system protein KefC VA249_37160 IPR004771 K+/H+ exchanger VA249_37160 IPR036291 NAD(P)-binding domain superfamily VA249_37160 IPR003148 Regulator of K+ conductance, N-terminal VA249_37160 IPR006153 Cation/H+ exchanger VA249_37180 IPR000847 Transcription regulator HTH, LysR VA249_37180 IPR036390 Winged helix DNA-binding domain superfamily VA249_37180 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_37180 IPR005119 LysR, substrate-binding VA249_37230 IPR017853 Glycoside hydrolase superfamily VA249_37230 IPR006047 Glycosyl hydrolase, family 13, catalytic domain VA249_37230 IPR006046 Alpha amylase VA249_37330 IPR006119 Resolvase, N-terminal catalytic domain VA249_37330 IPR006118 Recombinase, conserved site VA249_37330 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily VA249_37330 IPR006120 Resolvase, HTH domain VA249_37330 IPR009057 Homeobox-like domain superfamily VA249_37400 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type VA249_37400 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site VA249_37410 IPR002545 CheW-like domain VA249_37410 IPR011006 CheY-like superfamily VA249_37410 IPR001789 Signal transduction response regulator, receiver domain VA249_37410 IPR036061 CheW-like domain superfamily VA249_37410 IPR024181 Chemotaxis response regulator CheV VA249_37430 IPR012349 FMN-binding split barrel VA249_37430 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative VA249_37430 IPR014419 Heme utilization protein HutZ VA249_37440 IPR010413 Intracellular heme transport protein HutX-like VA249_37450 IPR026332 Anaerobilin synthase HutW VA249_37450 IPR007197 Radical SAM VA249_37450 IPR034505 Anaerobic coproporphyrinogen-III oxidase VA249_37450 IPR006638 Elp3/MiaB/NifB VA249_37450 IPR023404 Radical SAM, alpha/beta horseshoe VA249_37460 IPR003538 Gram-negative bacterial TonB protein VA249_37460 IPR006260 TonB/TolA, C-terminal VA249_37460 IPR037682 TonB, C-terminal VA249_37470 IPR002898 MotA/TolQ/ExbB proton channel VA249_37480 IPR003400 Biopolymer transport protein ExbD/TolR VA249_37500 IPR037294 ABC transporter, BtuC-like VA249_37500 IPR000522 ABC transporter, permease protein, BtuC-like VA249_37510 IPR003593 AAA+ ATPase domain VA249_37510 IPR015863 ABC transporter, hemin import, HmuV VA249_37510 IPR003439 ABC transporter-like VA249_37510 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_37590 IPR036390 Winged helix DNA-binding domain superfamily VA249_37590 IPR000524 Transcription regulator HTH, GntR VA249_37590 IPR008920 Transcription regulator FadR/GntR, C-terminal VA249_37590 IPR011711 GntR, C-terminal VA249_37590 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_37610 IPR004821 Cytidyltransferase-like domain VA249_37610 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase VA249_37610 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VA249_37620 IPR022310 NAD/GMP synthase VA249_37620 IPR003694 NAD(+) synthetase VA249_37620 IPR022926 NH(3)-dependent NAD(+) synthetase VA249_37620 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VA249_37630 IPR011037 Pyruvate kinase-like, insert domain superfamily VA249_37630 IPR036010 2Fe-2S ferredoxin-like superfamily VA249_37630 IPR012675 Beta-grasp domain superfamily VA249_37630 IPR005302 Molybdenum cofactor sulfurase, C-terminal VA249_37630 IPR005303 MOSC, N-terminal beta barrel VA249_37630 IPR011037 Pyruvate kinase-like, insert domain superfamily VA249_37630 IPR036010 2Fe-2S ferredoxin-like superfamily VA249_37630 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain VA249_37630 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site VA249_37630 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain VA249_37630 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site VA249_37630 IPR012675 Beta-grasp domain superfamily VA249_37630 IPR005302 Molybdenum cofactor sulfurase, C-terminal VA249_37630 IPR005303 MOSC, N-terminal beta barrel VA249_37640 IPR000612 Proteolipid membrane potential modulator VA249_37650 IPR004721 Dihydroorotase homodimeric type VA249_37650 IPR032466 Metal-dependent hydrolase VA249_37650 IPR006680 Amidohydrolase-related VA249_37650 IPR002195 Dihydroorotase, conserved site VA249_37660 IPR008526 Inner membrane protein YedI VA249_37680 IPR004045 Glutathione S-transferase, N-terminal VA249_37680 IPR011767 Glutaredoxin active site VA249_37680 IPR007494 Glutaredoxin 2, C-terminal VA249_37680 IPR036282 Glutathione S-transferase, C-terminal domain superfamily VA249_37680 IPR011901 Glutaredoxin-2 VA249_37680 IPR036249 Thioredoxin-like superfamily VA249_37690 IPR036291 NAD(P)-binding domain superfamily VA249_37690 IPR011032 GroES-like superfamily VA249_37690 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 VA249_37690 IPR013154 Alcohol dehydrogenase, N-terminal VA249_37690 IPR013149 Alcohol dehydrogenase, C-terminal VA249_37690 IPR020843 Polyketide synthase, enoylreductase domain VA249_37690 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site VA249_37810 IPR035906 MetI-like superfamily VA249_37810 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VA249_37820 IPR030156 Maltose/maltodextrin transport system permease protein MalF-like VA249_37820 IPR035277 MalF, N-terminal VA249_37820 IPR035906 MetI-like superfamily VA249_37820 IPR029345 Maltose transport system permease protein MalF, P2 domain VA249_37820 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VA249_37830 IPR006059 Bacterial extracellular solute-binding protein VA249_37830 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein VA249_37830 IPR006061 Solute-binding family 1, conserved site VA249_37840 IPR003593 AAA+ ATPase domain VA249_37840 IPR003439 ABC transporter-like VA249_37840 IPR017871 ABC transporter, conserved site VA249_37840 IPR015855 ABC transporter, maltose/maltodextrin import, MalK VA249_37840 IPR008995 Molybdate/tungstate binding, C-terminal VA249_37840 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_37840 IPR013611 Transport-associated OB, type 2 VA249_37850 IPR008314 Uncharacterised conserved protein UCP029143 VA249_37850 IPR007374 ASCH domain VA249_37850 IPR015947 PUA-like superfamily VA249_37860 IPR009057 Homeobox-like domain superfamily VA249_37860 IPR001647 DNA-binding HTH domain, TetR-type VA249_37860 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily VA249_37860 IPR011075 Tetracyclin repressor-like, C-terminal domain VA249_37870 IPR020843 Polyketide synthase, enoylreductase domain VA249_37870 IPR011032 GroES-like superfamily VA249_37870 IPR041694 Oxidoreductase, N-terminal domain VA249_37870 IPR036291 NAD(P)-binding domain superfamily VA249_37870 IPR013149 Alcohol dehydrogenase, C-terminal VA249_37890 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 VA249_37890 IPR010582 Catalase immune-responsive domain VA249_37890 IPR002226 Catalase haem-binding site VA249_37890 IPR020835 Catalase superfamily VA249_37890 IPR024708 Catalase active site VA249_37890 IPR011614 Catalase core domain VA249_37890 IPR040333 Catalase, clade 3 VA249_37890 IPR018028 Catalase, mono-functional, haem-containing VA249_37890 IPR037060 Catalase core domain superfamily VA249_37900 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain VA249_37900 IPR036291 NAD(P)-binding domain superfamily VA249_37900 IPR015815 3-hydroxyisobutyrate dehydrogenase-related VA249_37900 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding VA249_37900 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily VA249_37900 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site VA249_37900 IPR013328 6-phosphogluconate dehydrogenase, domain 2 VA249_37920 IPR000847 Transcription regulator HTH, LysR VA249_37920 IPR036390 Winged helix DNA-binding domain superfamily VA249_37920 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_37920 IPR005119 LysR, substrate-binding VA249_37930 IPR013014 Phosphotransferase system, EIIC component, type 2 VA249_37930 IPR006327 Phosphotransferase system, fructose IIC component VA249_37940 IPR036095 PTS system IIB component-like superfamily VA249_37940 IPR013011 Phosphotransferase system, EIIB component, type 2 VA249_37940 IPR003501 Phosphotransferase system, EIIB component, type 2/3 VA249_37940 IPR003353 Phosphotransferase system, fructose-specific IIB subunit VA249_37960 IPR020449 Transcription regulator HTH, AraC- type VA249_37960 IPR009057 Homeobox-like domain superfamily VA249_37960 IPR018060 DNA binding HTH domain, AraC-type VA249_37960 IPR018062 HTH domain AraC-type, conserved site VA249_37970 IPR016152 Phosphotransferase/anion transporter VA249_37970 IPR006327 Phosphotransferase system, fructose IIC component VA249_37970 IPR003353 Phosphotransferase system, fructose-specific IIB subunit VA249_37970 IPR002178 PTS EIIA type-2 domain VA249_37970 IPR036095 PTS system IIB component-like superfamily VA249_37970 IPR013011 Phosphotransferase system, EIIB component, type 2 VA249_37970 IPR003501 Phosphotransferase system, EIIB component, type 2/3 VA249_37970 IPR013014 Phosphotransferase system, EIIC component, type 2 VA249_37970 IPR004715 Phosphotransferase system, IIA component fructose subfamily VA249_37980 IPR018050 Phosphomannose isomerase, type I, conserved site VA249_37980 IPR014710 RmlC-like jelly roll fold VA249_37980 IPR011051 RmlC-like cupin domain superfamily VA249_37980 IPR016305 Mannose-6-phosphate isomerase VA249_37980 IPR001250 Mannose-6-phosphate isomerase, type I VA249_37990 IPR001927 Sodium:galactoside symporter VA249_37990 IPR018043 Sodium:galactoside symporter, conserved site VA249_37990 IPR039672 Lactose permease-like VA249_37990 IPR036259 MFS transporter superfamily VA249_38000 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal VA249_38000 IPR019802 Glycoside hydrolase, family 4, conserved site VA249_38000 IPR001088 Glycoside hydrolase, family 4 VA249_38000 IPR022616 Glycosyl hydrolase, family 4, C-terminal VA249_38000 IPR036291 NAD(P)-binding domain superfamily VA249_38010 IPR008917 Transcription factor, Skn-1-like, DNA-binding domain superfamily VA249_38010 IPR011051 RmlC-like cupin domain superfamily VA249_38010 IPR014710 RmlC-like jelly roll fold VA249_38010 IPR018062 HTH domain AraC-type, conserved site VA249_38010 IPR009057 Homeobox-like domain superfamily VA249_38010 IPR020449 Transcription regulator HTH, AraC- type VA249_38010 IPR018060 DNA binding HTH domain, AraC-type VA249_38030 IPR035994 Nucleoside phosphorylase superfamily VA249_38030 IPR018016 Nucleoside phosphorylase, conserved site VA249_38030 IPR000845 Nucleoside phosphorylase domain VA249_38030 IPR004402 Purine nucleoside phosphorylase DeoD-type VA249_38040 IPR000845 Nucleoside phosphorylase domain VA249_38040 IPR010058 Uridine phosphorylase VA249_38040 IPR035994 Nucleoside phosphorylase superfamily VA249_38040 IPR018016 Nucleoside phosphorylase, conserved site VA249_38060 IPR008276 Concentrative nucleoside transporter VA249_38060 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain VA249_38060 IPR002668 Concentrative nucleoside transporter N-terminal domain VA249_38060 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial VA249_38060 IPR011657 Concentrative nucleoside transporter C-terminal domain VA249_38070 IPR003680 Flavodoxin-like fold VA249_38070 IPR029039 Flavoprotein-like superfamily VA249_38080 IPR017588 Uric acid permease UacT-like VA249_38080 IPR006042 Xanthine/uracil permease VA249_38080 IPR006043 Xanthine/uracil/vitamin C permease VA249_38090 IPR006680 Amidohydrolase-related VA249_38090 IPR023512 Deaminase MtaD/DadD VA249_38090 IPR011059 Metal-dependent hydrolase, composite domain superfamily VA249_38090 IPR032466 Metal-dependent hydrolase VA249_38110 IPR032466 Metal-dependent hydrolase VA249_38110 IPR006680 Amidohydrolase-related VA249_38110 IPR005920 Imidazolonepropionase VA249_38110 IPR011059 Metal-dependent hydrolase, composite domain superfamily VA249_38120 IPR036010 2Fe-2S ferredoxin-like superfamily VA249_38120 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain VA249_38120 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VA249_38120 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VA249_38120 IPR009010 Aspartate decarboxylase-like domain superfamily VA249_38120 IPR006478 Formate dehydrogenase, alpha subunit VA249_38120 IPR041924 Formate dehydrogenase H, N-terminal VA249_38120 IPR006656 Molybdopterin oxidoreductase VA249_38120 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding VA249_38120 IPR006657 Molybdopterin dinucleotide-binding domain VA249_38120 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain VA249_38140 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VA249_38140 IPR006143 RND efflux pump, membrane fusion protein VA249_38150 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VA249_38150 IPR001036 Acriflavin resistance protein VA249_38150 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA VA249_38180 IPR023650 Beta-lactamase, class-A active site VA249_38180 IPR012338 Beta-lactamase/transpeptidase-like VA249_38180 IPR000871 Beta-lactamase, class-A VA249_38200 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain VA249_38200 IPR006162 Phosphopantetheine attachment site VA249_38200 IPR009081 Phosphopantetheine binding ACP domain VA249_38200 IPR020806 Polyketide synthase, phosphopantetheine-binding domain VA249_38200 IPR013968 Polyketide synthase, ketoreductase domain VA249_38200 IPR020843 Polyketide synthase, enoylreductase domain VA249_38200 IPR042104 Polyketide synthase, dehydratase domain superfamily VA249_38200 IPR020807 Polyketide synthase, dehydratase domain VA249_38200 IPR016039 Thiolase-like VA249_38200 IPR036736 ACP-like superfamily VA249_38200 IPR011032 GroES-like superfamily VA249_38200 IPR014043 Acyl transferase VA249_38200 IPR018201 Beta-ketoacyl synthase, active site VA249_38200 IPR014031 Beta-ketoacyl synthase, C-terminal VA249_38200 IPR014030 Beta-ketoacyl synthase, N-terminal VA249_38200 IPR013154 Alcohol dehydrogenase, N-terminal VA249_38200 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding VA249_38200 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase VA249_38200 IPR032821 Ketoacyl-synthetase, C-terminal extension VA249_38200 IPR036291 NAD(P)-binding domain superfamily VA249_38230 IPR020476 NUDIX hydrolase VA249_38230 IPR003561 Mutator MutT VA249_38230 IPR020084 NUDIX hydrolase, conserved site VA249_38230 IPR000086 NUDIX hydrolase domain VA249_38230 IPR015797 NUDIX hydrolase-like domain superfamily VA249_38240 IPR000182 GNAT domain VA249_38240 IPR016181 Acyl-CoA N-acyltransferase VA249_38250 IPR002471 Peptidase S9, serine active site VA249_38250 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain VA249_38250 IPR023302 Peptidase S9A, N-terminal domain VA249_38250 IPR029058 Alpha/Beta hydrolase fold VA249_38250 IPR002470 Peptidase S9A, prolyl oligopeptidase VA249_38270 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VA249_38270 IPR006015 Universal stress protein A family VA249_38270 IPR006016 UspA VA249_38290 IPR006645 NusG, N-terminal VA249_38290 IPR036735 NusG, N-terminal domain superfamily VA249_38290 IPR010215 Transcription antitermination protein RfaH VA249_38320 IPR002641 Patatin-like phospholipase domain VA249_38320 IPR037483 YjjU-like VA249_38320 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase VA249_38330 IPR012093 Pirin VA249_38330 IPR008778 Pirin, C-terminal domain VA249_38330 IPR003829 Pirin, N-terminal domain VA249_38330 IPR014710 RmlC-like jelly roll fold VA249_38330 IPR011051 RmlC-like cupin domain superfamily VA249_38340 IPR012340 Nucleic acid-binding, OB-fold VA249_38340 IPR002059 Cold-shock protein, DNA-binding VA249_38340 IPR019844 Cold-shock (CSD) domain VA249_38340 IPR011129 Cold shock domain VA249_38340 IPR012156 Cold shock, CspA VA249_38370 IPR036249 Thioredoxin-like superfamily VA249_38370 IPR013740 Redoxin VA249_38370 IPR014025 Glutaredoxin subgroup VA249_38370 IPR011906 Glutaredoxin domain VA249_38370 IPR002109 Glutaredoxin VA249_38370 IPR011767 Glutaredoxin active site VA249_38370 IPR037944 Peroxiredoxin-5-like VA249_38390 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily VA249_38390 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A VA249_38390 IPR015956 Penicillin-binding protein, C-terminal domain superfamily VA249_38390 IPR012338 Beta-lactamase/transpeptidase-like VA249_38390 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal VA249_38390 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal VA249_38410 IPR018093 BCCT transporter, conserved site VA249_38410 IPR000060 BCCT transporter family VA249_38420 IPR029039 Flavoprotein-like superfamily VA249_38420 IPR003680 Flavodoxin-like fold VA249_38430 IPR036390 Winged helix DNA-binding domain superfamily VA249_38430 IPR005119 LysR, substrate-binding VA249_38430 IPR000847 Transcription regulator HTH, LysR VA249_38430 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_38430 IPR011781 D-serine deaminase transcriptional activator VA249_38440 IPR004045 Glutathione S-transferase, N-terminal VA249_38440 IPR040079 Glutathione Transferase family VA249_38440 IPR036282 Glutathione S-transferase, C-terminal domain superfamily VA249_38440 IPR010987 Glutathione S-transferase, C-terminal-like VA249_38440 IPR036249 Thioredoxin-like superfamily VA249_38450 IPR023772 DNA-binding HTH domain, TetR-type, conserved site VA249_38450 IPR009057 Homeobox-like domain superfamily VA249_38450 IPR001647 DNA-binding HTH domain, TetR-type VA249_38450 IPR003012 Tetracycline transcriptional regulator, TetR VA249_38450 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily VA249_38450 IPR004111 Tetracycline repressor TetR, C-terminal VA249_38460 IPR024072 Dihydrofolate reductase-like domain superfamily VA249_38460 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal VA249_38470 IPR002347 Short-chain dehydrogenase/reductase SDR VA249_38470 IPR020904 Short-chain dehydrogenase/reductase, conserved site VA249_38470 IPR036291 NAD(P)-binding domain superfamily VA249_38470 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase VA249_38510 IPR036291 NAD(P)-binding domain superfamily VA249_38510 IPR002347 Short-chain dehydrogenase/reductase SDR VA249_38510 IPR020904 Short-chain dehydrogenase/reductase, conserved site VA249_38530 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_38530 IPR000847 Transcription regulator HTH, LysR VA249_38530 IPR005119 LysR, substrate-binding VA249_38530 IPR036390 Winged helix DNA-binding domain superfamily VA249_38540 IPR018062 HTH domain AraC-type, conserved site VA249_38540 IPR018060 DNA binding HTH domain, AraC-type VA249_38540 IPR002491 ABC transporter periplasmic binding domain VA249_38540 IPR009057 Homeobox-like domain superfamily VA249_38540 IPR020449 Transcription regulator HTH, AraC- type VA249_38550 IPR015421 Pyridoxal phosphate-dependent transferase, major domain VA249_38550 IPR004839 Aminotransferase, class I/classII VA249_38550 IPR015424 Pyridoxal phosphate-dependent transferase VA249_38550 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 VA249_38600 IPR011545 DEAD/DEAH box helicase domain VA249_38600 IPR028622 ATP-dependent RNA helicase RhlE VA249_38600 IPR014001 Helicase superfamily 1/2, ATP-binding domain VA249_38600 IPR001650 Helicase, C-terminal VA249_38600 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_38600 IPR014014 RNA helicase, DEAD-box type, Q motif VA249_38600 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VA249_38610 IPR029062 Class I glutamine amidotransferase-like VA249_38610 IPR002818 DJ-1/PfpI VA249_38610 IPR009057 Homeobox-like domain superfamily VA249_38610 IPR018060 DNA binding HTH domain, AraC-type VA249_38640 IPR006016 UspA VA249_38640 IPR006015 Universal stress protein A family VA249_38640 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VA249_38650 IPR018636 Protein of unknown function DUF2058 VA249_38680 IPR005119 LysR, substrate-binding VA249_38680 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_38680 IPR000847 Transcription regulator HTH, LysR VA249_38680 IPR036390 Winged helix DNA-binding domain superfamily VA249_38690 IPR042109 Adenylosuccinate synthetase, domain 1 VA249_38690 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_38690 IPR001114 Adenylosuccinate synthetase VA249_38690 IPR042110 Adenylosuccinate synthetase, domain 2 VA249_38690 IPR042111 Adenylosuccinate synthetase, domain 3 VA249_38700 IPR037913 Small heat shock protein IbpA/IbpB, ACD domain VA249_38700 IPR002068 Alpha crystallin/Hsp20 domain VA249_38700 IPR008978 HSP20-like chaperone VA249_38700 IPR023728 Small heat shock protein IbpA VA249_38710 IPR013126 Heat shock protein 70 family VA249_38710 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily VA249_38710 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily VA249_38710 IPR018181 Heat shock protein 70, conserved site VA249_38710 IPR012725 Chaperone DnaK VA249_38720 IPR012724 Chaperone DnaJ VA249_38720 IPR001305 Heat shock protein DnaJ, cysteine-rich domain VA249_38720 IPR008971 HSP40/DnaJ peptide-binding VA249_38720 IPR018253 DnaJ domain, conserved site VA249_38720 IPR036869 Chaperone J-domain superfamily VA249_38720 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily VA249_38720 IPR001623 DnaJ domain VA249_38720 IPR002939 Chaperone DnaJ, C-terminal VA249_38730 IPR005177 Bifunctional kinase-pyrophosphorylase VA249_38730 IPR026530 Phosphoenolpyruvate synthase regulatory protein VA249_38740 IPR013815 ATP-grasp fold, subdomain 1 VA249_38740 IPR008279 PEP-utilising enzyme, mobile domain VA249_38740 IPR006319 Phosphoenolpyruvate synthase VA249_38740 IPR040442 Pyruvate kinase-like domain superfamily VA249_38740 IPR018274 PEP-utilising enzyme, active site VA249_38740 IPR000121 PEP-utilising enzyme, C-terminal VA249_38740 IPR023151 PEP-utilising enzyme, conserved site VA249_38740 IPR036637 Phosphohistidine domain superfamily VA249_38740 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily VA249_38740 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding VA249_38760 IPR007059 DMSO reductase anchor subunit (DmsC) VA249_38770 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VA249_38770 IPR014297 Dimethylsulphoxide reductase, chain B VA249_38770 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VA249_38780 IPR006311 Twin-arginine translocation pathway, signal sequence VA249_38780 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal VA249_38780 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site VA249_38780 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site VA249_38780 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain VA249_38780 IPR006656 Molybdopterin oxidoreductase VA249_38780 IPR006657 Molybdopterin dinucleotide-binding domain VA249_38780 IPR009010 Aspartate decarboxylase-like domain superfamily VA249_38780 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE VA249_38790 IPR026269 Tat proofreading chaperone DmsD-type VA249_38790 IPR036411 TorD-like superfamily VA249_38790 IPR028611 Tat proofreading chaperone DmsD VA249_38790 IPR020945 DMSO/Nitrate reductase chaperone VA249_38810 IPR016032 Signal transduction response regulator, C-terminal effector VA249_38810 IPR000792 Transcription regulator LuxR, C-terminal VA249_38810 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_38820 IPR024088 Tyrosine-tRNA ligase, bacterial-type VA249_38820 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site VA249_38820 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VA249_38820 IPR036986 RNA-binding S4 domain superfamily VA249_38820 IPR002307 Tyrosine-tRNA ligase VA249_38820 IPR002305 Aminoacyl-tRNA synthetase, class Ic VA249_38820 IPR002942 RNA-binding S4 domain VA249_38820 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 VA249_38840 IPR005119 LysR, substrate-binding VA249_38840 IPR036390 Winged helix DNA-binding domain superfamily VA249_38840 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_38840 IPR000847 Transcription regulator HTH, LysR VA249_38850 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VA249_38860 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VA249_38860 IPR001036 Acriflavin resistance protein VA249_38860 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA VA249_38870 IPR003423 Outer membrane efflux protein VA249_38870 IPR010131 RND efflux system, outer membrane lipoprotein, NodT VA249_38880 IPR004445 Sodium/glutamate symport carrier protein GltS VA249_38900 IPR008979 Galactose-binding-like domain superfamily VA249_38900 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily VA249_38900 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich VA249_38900 IPR023230 Glycoside hydrolase, family 2, conserved site VA249_38900 IPR006103 Glycoside hydrolase family 2, catalytic domain VA249_38900 IPR023232 Glycoside hydrolase, family 2, active site VA249_38900 IPR006101 Glycoside hydrolase, family 2 VA249_38900 IPR040605 Glycoside hydrolase family 2, domain 5 VA249_38900 IPR006104 Glycosyl hydrolases family 2, sugar binding domain VA249_38900 IPR017853 Glycoside hydrolase superfamily VA249_38900 IPR013783 Immunoglobulin-like fold VA249_38910 IPR000060 BCCT transporter family VA249_38950 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VA249_38950 IPR001036 Acriflavin resistance protein VA249_38980 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VA249_38980 IPR001036 Acriflavin resistance protein VA249_38990 IPR006143 RND efflux pump, membrane fusion protein VA249_38990 IPR022871 Para-hydroxybenzoic acid efflux pump, subunit AaeA VA249_38990 IPR039562 Membrane fusion protein, biotin-lipoyl like domain VA249_39000 IPR030871 Cardiolipin synthase C VA249_39000 IPR025202 Phospholipase D-like domain VA249_39000 IPR001736 Phospholipase D/Transphosphatidylase VA249_39010 IPR025202 Phospholipase D-like domain VA249_39010 IPR001736 Phospholipase D/Transphosphatidylase VA249_39070 IPR001867 OmpR/PhoB-type DNA-binding domain VA249_39070 IPR016032 Signal transduction response regulator, C-terminal effector VA249_39070 IPR039420 Transcriptional regulatory protein WalR-like VA249_39070 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_39090 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_39090 IPR039420 Transcriptional regulatory protein WalR-like VA249_39090 IPR040970 CadC C-terminal domain 1 VA249_39090 IPR001867 OmpR/PhoB-type DNA-binding domain VA249_39090 IPR016032 Signal transduction response regulator, C-terminal effector VA249_39090 IPR011990 Tetratricopeptide-like helical domain superfamily VA249_39110 IPR009061 Putative DNA-binding domain superfamily VA249_39110 IPR000551 MerR-type HTH domain VA249_39110 IPR015358 Transcription regulator MerR, DNA binding VA249_39110 IPR010211 Redox-sensitive transcriptional activator SoxR VA249_39120 IPR000795 Transcription factor, GTP-binding domain VA249_39120 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VA249_39120 IPR020568 Ribosomal protein S5 domain 2-type fold VA249_39120 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_39120 IPR031157 Tr-type G domain, conserved site VA249_39120 IPR004540 Translation elongation factor EFG/EF2 VA249_39120 IPR004161 Translation elongation factor EFTu-like, domain 2 VA249_39120 IPR000640 Elongation factor EFG, domain V-like VA249_39120 IPR035647 EF-G domain III/V-like VA249_39120 IPR041095 Elongation Factor G, domain II VA249_39120 IPR035649 EFG, domain V VA249_39120 IPR005225 Small GTP-binding protein domain VA249_39120 IPR009000 Translation protein, beta-barrel domain superfamily VA249_39120 IPR005517 Translation elongation factor EFG/EF2, domain IV VA249_39120 IPR009022 Elongation factor G, domain III VA249_39160 IPR013324 RNA polymerase sigma factor, region 3/4-like VA249_39160 IPR002852 Uncharacterised protein family UPF0251 VA249_39160 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_39180 IPR035906 MetI-like superfamily VA249_39180 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VA249_39190 IPR000644 CBS domain VA249_39190 IPR017871 ABC transporter, conserved site VA249_39190 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_39190 IPR005892 Glycine betaine transport ATP-binding subunit VA249_39190 IPR003593 AAA+ ATPase domain VA249_39190 IPR003439 ABC transporter-like VA249_39200 IPR007298 Copper resistance lipoprotein NlpE VA249_39200 IPR038139 NlpE, C-terminal domain superfamily VA249_39200 IPR033450 NlpE, C-terminal OB domain VA249_39210 IPR036390 Winged helix DNA-binding domain superfamily VA249_39210 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_39210 IPR000847 Transcription regulator HTH, LysR VA249_39210 IPR005119 LysR, substrate-binding VA249_39250 IPR009707 Membrane protein GlpM/YdgC VA249_39270 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal VA249_39270 IPR007229 Nicotinate phosphoribosyltransferase family VA249_39270 IPR040727 Nicotinate phosphoribosyltransferase, N-terminal domain VA249_39270 IPR041525 Nicotinate/nicotinamide phosphoribosyltransferase VA249_39270 IPR006406 Nicotinate phosphoribosyltransferase VA249_39290 IPR036380 Isochorismatase-like superfamily VA249_39290 IPR000868 Isochorismatase-like VA249_39300 IPR001424 Superoxide dismutase, copper/zinc binding domain VA249_39300 IPR018152 Superoxide dismutase, copper/zinc, binding site VA249_39300 IPR024134 Superoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperone VA249_39300 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily VA249_39330 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VA249_39330 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VA249_39330 IPR037523 Vicinal oxygen chelate (VOC) domain VA249_39340 IPR028427 Peptide methionine sulfoxide reductase VA249_39340 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily VA249_39340 IPR002579 Peptide methionine sulphoxide reductase MrsB VA249_39340 IPR011057 Mss4-like superfamily VA249_39340 IPR002569 Peptide methionine sulphoxide reductase MsrA VA249_39360 IPR013014 Phosphotransferase system, EIIC component, type 2 VA249_39360 IPR006327 Phosphotransferase system, fructose IIC component VA249_39380 IPR001763 Rhodanese-like domain VA249_39380 IPR036873 Rhodanese-like domain superfamily VA249_39380 IPR023695 Thiosulfate sulfurtransferase, bacterial VA249_39390 IPR012338 Beta-lactamase/transpeptidase-like VA249_39390 IPR001586 Beta-lactamase, class-C active site VA249_39390 IPR001466 Beta-lactamase-related VA249_39400 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal VA249_39400 IPR009057 Homeobox-like domain superfamily VA249_39400 IPR018060 DNA binding HTH domain, AraC-type VA249_39400 IPR020449 Transcription regulator HTH, AraC- type VA249_39430 IPR018668 DNA-binding protein VF530-like VA249_39430 IPR036361 SAP domain superfamily VA249_39440 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_39440 IPR003439 ABC transporter-like VA249_39440 IPR032781 ABC-transporter extension domain VA249_39440 IPR003593 AAA+ ATPase domain VA249_39490 IPR006143 RND efflux pump, membrane fusion protein VA249_39490 IPR022871 Para-hydroxybenzoic acid efflux pump, subunit AaeA VA249_39490 IPR039562 Membrane fusion protein, biotin-lipoyl like domain VA249_39510 IPR002549 Transmembrane protein TqsA-like VA249_39520 IPR018635 Uncharacterised protein family UPF0319 VA249_39540 IPR001433 Oxidoreductase FAD/NAD(P)-binding VA249_39540 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VA249_39540 IPR033892 Ferredoxin--NADP reductase, bacteria VA249_39540 IPR017927 FAD-binding domain, ferredoxin reductase-type VA249_39540 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain VA249_39540 IPR017938 Riboflavin synthase-like beta-barrel VA249_39560 IPR036361 SAP domain superfamily VA249_39560 IPR018668 DNA-binding protein VF530-like VA249_39570 IPR000847 Transcription regulator HTH, LysR VA249_39570 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_39570 IPR036390 Winged helix DNA-binding domain superfamily VA249_39570 IPR005119 LysR, substrate-binding VA249_39590 IPR005119 LysR, substrate-binding VA249_39590 IPR000847 Transcription regulator HTH, LysR VA249_39590 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_39590 IPR036390 Winged helix DNA-binding domain superfamily VA249_39610 IPR013471 Ribonuclease Z/BN VA249_39610 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VA249_39610 IPR001279 Metallo-beta-lactamase VA249_39640 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily VA249_39640 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal VA249_39640 IPR012338 Beta-lactamase/transpeptidase-like VA249_39640 IPR015956 Penicillin-binding protein, C-terminal domain superfamily VA249_39640 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A VA249_39640 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal VA249_39650 IPR029058 Alpha/Beta hydrolase fold VA249_39650 IPR000073 Alpha/beta hydrolase fold-1 VA249_39650 IPR002410 Peptidase S33 VA249_39670 IPR000782 FAS1 domain VA249_39670 IPR036378 FAS1 domain superfamily VA249_39690 IPR020879 N-acetylglucosamine-binding protein A VA249_39690 IPR014756 Immunoglobulin E-set VA249_39690 IPR004302 Cellulose/chitin-binding protein, N-terminal VA249_39690 IPR041029 N-acetylglucosamine binding protein A domain 2 VA249_39720 IPR033480 Single Cache domain 2 VA249_39720 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VA249_39720 IPR003660 HAMP domain VA249_39720 IPR004090 Chemotaxis methyl-accepting receptor VA249_39730 IPR002641 Patatin-like phospholipase domain VA249_39730 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase VA249_39730 IPR037483 YjjU-like VA249_39790 IPR002771 Multiple antibiotic resistance (MarC)-related VA249_39800 IPR011825 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC VA249_39800 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VA249_39800 IPR030390 RNA methyltransferase TrmA, active site VA249_39800 IPR010280 (Uracil-5)-methyltransferase family VA249_39810 IPR016446 Flavin oxidoreductase Frp family VA249_39810 IPR029479 Nitroreductase VA249_39810 IPR000415 Nitroreductase-like VA249_39870 IPR001991 Sodium:dicarboxylate symporter VA249_39870 IPR018107 Sodium:dicarboxylate symporter, conserved site VA249_39870 IPR036458 Sodium:dicarboxylate symporter superfamily VA249_39870 IPR033380 Glutamate-aspartate symport protein GltP/GltT VA249_39870 IPR034703 Proton/glutamate-aspartate symporter GltP VA249_39880 IPR010652 Domain of unknown function DUF1232 VA249_39890 IPR011650 Peptidase M20, dimerisation domain VA249_39890 IPR036264 Bacterial exopeptidase dimerisation domain VA249_39890 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria VA249_39890 IPR002933 Peptidase M20 VA249_39900 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain VA249_39910 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain VA249_39920 IPR014635 Alpha-amylase, MalS type VA249_39920 IPR006047 Glycosyl hydrolase, family 13, catalytic domain VA249_39920 IPR017853 Glycoside hydrolase superfamily VA249_39930 IPR001264 Glycosyl transferase, family 51 VA249_39930 IPR023346 Lysozyme-like domain superfamily VA249_39930 IPR036950 Penicillin binding protein transglycosylase domain VA249_39930 IPR011812 Biosynthetic peptidoglycan transglycosylase VA249_39940 IPR014756 Immunoglobulin E-set VA249_39940 IPR017853 Glycoside hydrolase superfamily VA249_39940 IPR013780 Glycosyl hydrolase, all-beta VA249_39940 IPR004193 Glycoside hydrolase, family 13, N-terminal VA249_39940 IPR006047 Glycosyl hydrolase, family 13, catalytic domain VA249_39940 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB VA249_39940 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta VA249_39940 IPR013783 Immunoglobulin-like fold VA249_39940 IPR037439 1,4-alpha-glucan-branching enzyme VA249_39950 IPR003385 Glycoside hydrolase, family 77 VA249_39950 IPR017853 Glycoside hydrolase superfamily VA249_39960 IPR011833 Glycogen/starch/alpha-glucan phosphorylase VA249_39960 IPR000811 Glycosyl transferase, family 35 VA249_39960 IPR035090 Phosphorylase pyridoxal-phosphate attachment site VA249_39970 IPR000792 Transcription regulator LuxR, C-terminal VA249_39970 IPR023768 Transcriptional regulator HTH-type, MalT VA249_39970 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_39970 IPR011990 Tetratricopeptide-like helical domain superfamily VA249_39970 IPR016032 Signal transduction response regulator, C-terminal effector VA249_39970 IPR041617 MalT-like TPR region VA249_39970 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_40000 IPR003782 Copper chaperone SCO1/SenC VA249_40000 IPR036249 Thioredoxin-like superfamily VA249_40020 IPR036878 Glucose permease domain IIB VA249_40020 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site VA249_40020 IPR003352 Phosphotransferase system, EIIC VA249_40020 IPR013013 Phosphotransferase system, EIIC component, type 1 VA249_40020 IPR001996 Phosphotransferase system, IIB component, type 1 VA249_40020 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component VA249_40030 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain VA249_40030 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_40030 IPR004881 Ribosome biogenesis GTPase RsgA VA249_40030 IPR010914 RsgA GTPase domain VA249_40040 IPR036458 Sodium:dicarboxylate symporter superfamily VA249_40040 IPR023025 Serine/threonine transporter SstT VA249_40040 IPR001991 Sodium:dicarboxylate symporter VA249_40050 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase VA249_40050 IPR004625 Pyridoxine kinase VA249_40050 IPR023685 Pyridoxal kinase PdxY VA249_40050 IPR029056 Ribokinase-like VA249_40070 IPR002293 Amino acid/polyamine transporter I VA249_40070 IPR004754 Amino acid antiporter VA249_40070 IPR027566 Putrescine transporter PotE VA249_40080 IPR015421 Pyridoxal phosphate-dependent transferase, major domain VA249_40080 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 VA249_40080 IPR015424 Pyridoxal phosphate-dependent transferase VA249_40080 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily VA249_40080 IPR000310 Orn/Lys/Arg decarboxylase, major domain VA249_40080 IPR027464 Ornithine decarboxylase, N-terminal VA249_40080 IPR011193 Ornithine/lysine/arginine decarboxylase VA249_40080 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal VA249_40080 IPR027568 Ornithine decarboxylase SpeF VA249_40080 IPR011006 CheY-like superfamily VA249_40080 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal VA249_40110 IPR011839 Alpha-1,6-glucosidases, pullulanase-type VA249_40110 IPR040671 Pullulanase, N2 domain VA249_40110 IPR041111 Pullulanase, Ins domain VA249_40110 IPR014756 Immunoglobulin E-set VA249_40110 IPR024561 Alpha-1,6-glucosidases, pullulanase-type, C-terminal VA249_40110 IPR017853 Glycoside hydrolase superfamily VA249_40110 IPR013783 Immunoglobulin-like fold VA249_40110 IPR013784 Carbohydrate-binding-like fold VA249_40110 IPR005323 Pullulanase, carbohydrate-binding module 41 VA249_40110 IPR004193 Glycoside hydrolase, family 13, N-terminal VA249_40110 IPR013780 Glycosyl hydrolase, all-beta VA249_40110 IPR006047 Glycosyl hydrolase, family 13, catalytic domain VA249_40120 IPR006047 Glycosyl hydrolase, family 13, catalytic domain VA249_40120 IPR004185 Glycoside hydrolase, family 13, N-terminal Ig-like domain VA249_40120 IPR013780 Glycosyl hydrolase, all-beta VA249_40120 IPR017853 Glycoside hydrolase superfamily VA249_40120 IPR013783 Immunoglobulin-like fold VA249_40120 IPR014756 Immunoglobulin E-set VA249_40150 IPR023738 Maltoporin VA249_40150 IPR003192 Porin, LamB-type VA249_40150 IPR036998 Porin, LamB-type superfamily VA249_40160 IPR014756 Immunoglobulin E-set VA249_40160 IPR013783 Immunoglobulin-like fold VA249_40160 IPR017853 Glycoside hydrolase superfamily VA249_40160 IPR013780 Glycosyl hydrolase, all-beta VA249_40160 IPR022844 Glycogen debranching enzyme, bacterial VA249_40160 IPR004193 Glycoside hydrolase, family 13, N-terminal VA249_40160 IPR040784 Glycogen debranching enzyme, C-terminal domain VA249_40160 IPR011837 Glycogen debranching enzyme, GlgX type VA249_40160 IPR006047 Glycosyl hydrolase, family 13, catalytic domain VA249_40170 IPR006047 Glycosyl hydrolase, family 13, catalytic domain VA249_40170 IPR004193 Glycoside hydrolase, family 13, N-terminal VA249_40170 IPR013780 Glycosyl hydrolase, all-beta VA249_40170 IPR011837 Glycogen debranching enzyme, GlgX type VA249_40170 IPR017853 Glycoside hydrolase superfamily VA249_40170 IPR013783 Immunoglobulin-like fold VA249_40170 IPR014756 Immunoglobulin E-set VA249_40180 IPR029787 Nucleotide cyclase VA249_40180 IPR033424 Membrane-associated sensor domain VA249_40180 IPR000160 GGDEF domain VA249_40190 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily VA249_40190 IPR006120 Resolvase, HTH domain VA249_40190 IPR009057 Homeobox-like domain superfamily VA249_40190 IPR006118 Recombinase, conserved site VA249_40190 IPR006119 Resolvase, N-terminal catalytic domain VA249_40200 IPR023697 Multidrug resistance protein MdtL VA249_40200 IPR036259 MFS transporter superfamily VA249_40200 IPR020846 Major facilitator superfamily domain VA249_40200 IPR011701 Major facilitator superfamily VA249_40210 IPR000620 EamA domain VA249_40220 IPR010917 TonB-dependent receptor, conserved site VA249_40220 IPR039426 Vitamin B12 transporter BtuB-like VA249_40220 IPR012910 TonB-dependent receptor, plug domain VA249_40220 IPR037066 TonB-dependent receptor, plug domain superfamily VA249_40220 IPR000531 TonB-dependent receptor-like, beta-barrel VA249_40220 IPR010916 TonB box, conserved site VA249_40220 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily VA249_40230 IPR000847 Transcription regulator HTH, LysR VA249_40230 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_40230 IPR036390 Winged helix DNA-binding domain superfamily VA249_40230 IPR005119 LysR, substrate-binding VA249_40240 IPR033870 FatB domain VA249_40240 IPR002491 ABC transporter periplasmic binding domain VA249_40250 IPR000522 ABC transporter, permease protein, BtuC-like VA249_40250 IPR037294 ABC transporter, BtuC-like VA249_40260 IPR037294 ABC transporter, BtuC-like VA249_40260 IPR000522 ABC transporter, permease protein, BtuC-like VA249_40270 IPR003593 AAA+ ATPase domain VA249_40270 IPR003439 ABC transporter-like VA249_40270 IPR017871 ABC transporter, conserved site VA249_40270 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_40280 IPR001647 DNA-binding HTH domain, TetR-type VA249_40280 IPR009057 Homeobox-like domain superfamily VA249_40280 IPR023772 DNA-binding HTH domain, TetR-type, conserved site VA249_40280 IPR013571 Transcription regulator QacR, C-terminal VA249_40280 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily VA249_40300 IPR039562 Membrane fusion protein, biotin-lipoyl like domain VA249_40350 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VA249_40390 IPR001539 Peptidase U32 VA249_40390 IPR032525 Peptidase family U32, C-terminal VA249_40420 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_40420 IPR003593 AAA+ ATPase domain VA249_40420 IPR003439 ABC transporter-like VA249_40430 IPR025857 MacB-like periplasmic core domain VA249_40430 IPR003838 ABC transporter permease protein domain VA249_40460 IPR018062 HTH domain AraC-type, conserved site VA249_40460 IPR014710 RmlC-like jelly roll fold VA249_40460 IPR023609 Transcription regulator HTH, RhaS VA249_40460 IPR009057 Homeobox-like domain superfamily VA249_40460 IPR003313 AraC-type arabinose-binding/dimerisation domain VA249_40460 IPR037923 Transcription regulator HTH-like VA249_40460 IPR018060 DNA binding HTH domain, AraC-type VA249_40460 IPR020449 Transcription regulator HTH, AraC- type VA249_40470 IPR036249 Thioredoxin-like superfamily VA249_40470 IPR013766 Thioredoxin domain VA249_40470 IPR017559 Alkyl hydroperoxide reductase subunit C VA249_40470 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant VA249_40470 IPR024706 Peroxiredoxin, AhpC-type VA249_40470 IPR019479 Peroxiredoxin, C-terminal VA249_40480 IPR036249 Thioredoxin-like superfamily VA249_40480 IPR012336 Thioredoxin-like fold VA249_40480 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site VA249_40480 IPR002109 Glutaredoxin VA249_40480 IPR023753 FAD/NAD(P)-binding domain VA249_40480 IPR036188 FAD/NAD(P)-binding domain superfamily VA249_40480 IPR012081 Alkyl hydroperoxide reductase subunit F VA249_40490 IPR012340 Nucleic acid-binding, OB-fold VA249_40490 IPR002059 Cold-shock protein, DNA-binding VA249_40490 IPR019844 Cold-shock (CSD) domain VA249_40490 IPR011129 Cold shock domain VA249_40490 IPR012156 Cold shock, CspA VA249_40500 IPR015424 Pyridoxal phosphate-dependent transferase VA249_40500 IPR015421 Pyridoxal phosphate-dependent transferase, major domain VA249_40500 IPR005814 Aminotransferase class-III VA249_40500 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 VA249_40510 IPR011008 Dimeric alpha-beta barrel VA249_40510 IPR019888 Transcription regulator AsnC-type VA249_40510 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VA249_40510 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_40510 IPR036390 Winged helix DNA-binding domain superfamily VA249_40510 IPR000485 AsnC-type HTH domain VA249_40510 IPR011991 ArsR-like helix-turn-helix domain VA249_40520 IPR000994 Peptidase M24 VA249_40520 IPR014335 Ectoine utilization protein EutD VA249_40520 IPR000587 Creatinase, N-terminal VA249_40520 IPR036005 Creatinase/aminopeptidase-like VA249_40520 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal VA249_40560 IPR029062 Class I glutamine amidotransferase-like VA249_40560 IPR018062 HTH domain AraC-type, conserved site VA249_40560 IPR018060 DNA binding HTH domain, AraC-type VA249_40560 IPR009057 Homeobox-like domain superfamily VA249_40560 IPR020449 Transcription regulator HTH, AraC- type VA249_40570 IPR006311 Twin-arginine translocation pathway, signal sequence VA249_40570 IPR016292 Epoxide hydrolase VA249_40570 IPR010497 Epoxide hydrolase, N-terminal VA249_40570 IPR029058 Alpha/Beta hydrolase fold VA249_40570 IPR000639 Epoxide hydrolase-like VA249_40580 IPR009057 Homeobox-like domain superfamily VA249_40580 IPR018060 DNA binding HTH domain, AraC-type VA249_40580 IPR018062 HTH domain AraC-type, conserved site VA249_40580 IPR020449 Transcription regulator HTH, AraC- type VA249_40590 IPR028622 ATP-dependent RNA helicase RhlE VA249_40590 IPR001650 Helicase, C-terminal VA249_40590 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_40590 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VA249_40590 IPR014014 RNA helicase, DEAD-box type, Q motif VA249_40590 IPR011545 DEAD/DEAH box helicase domain VA249_40590 IPR014001 Helicase superfamily 1/2, ATP-binding domain VA249_40600 IPR036237 Xylose isomerase-like superfamily VA249_40600 IPR004628 Mannonate dehydratase VA249_40610 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily VA249_40610 IPR013118 Mannitol dehydrogenase, C-terminal VA249_40610 IPR000669 Mannitol dehydrogenase VA249_40610 IPR036291 NAD(P)-binding domain superfamily VA249_40610 IPR013131 Mannitol dehydrogenase, N-terminal VA249_40610 IPR013328 6-phosphogluconate dehydrogenase, domain 2 VA249_40610 IPR023027 Mannitol dehydrogenase, conserved site VA249_40620 IPR003766 Uronate isomerase VA249_40620 IPR032466 Metal-dependent hydrolase VA249_40630 IPR029056 Ribokinase-like VA249_40630 IPR011611 Carbohydrate kinase PfkB VA249_40630 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site VA249_40640 IPR031337 KDPG/KHG aldolase, active site 1 VA249_40640 IPR031338 KDPG/KHG aldolase, active site 2 VA249_40640 IPR013785 Aldolase-type TIM barrel VA249_40640 IPR000887 KDPG/KHG aldolase VA249_40660 IPR018043 Sodium:galactoside symporter, conserved site VA249_40660 IPR001927 Sodium:galactoside symporter VA249_40660 IPR036259 MFS transporter superfamily VA249_40660 IPR039672 Lactose permease-like VA249_40670 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily VA249_40670 IPR008979 Galactose-binding-like domain superfamily VA249_40670 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich VA249_40670 IPR006101 Glycoside hydrolase, family 2 VA249_40670 IPR023232 Glycoside hydrolase, family 2, active site VA249_40670 IPR006103 Glycoside hydrolase family 2, catalytic domain VA249_40670 IPR023230 Glycoside hydrolase, family 2, conserved site VA249_40670 IPR013783 Immunoglobulin-like fold VA249_40670 IPR017853 Glycoside hydrolase superfamily VA249_40670 IPR006104 Glycosyl hydrolases family 2, sugar binding domain VA249_40690 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_40690 IPR036390 Winged helix DNA-binding domain superfamily VA249_40690 IPR011711 GntR, C-terminal VA249_40690 IPR000524 Transcription regulator HTH, GntR VA249_40690 IPR008920 Transcription regulator FadR/GntR, C-terminal VA249_40700 IPR023614 Porin domain superfamily VA249_40700 IPR005318 Outer membrane porin, bacterial VA249_40730 IPR017871 ABC transporter, conserved site VA249_40730 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_40730 IPR039421 Type I protein exporter VA249_40730 IPR011527 ABC transporter type 1, transmembrane domain VA249_40730 IPR036640 ABC transporter type 1, transmembrane domain superfamily VA249_40730 IPR003439 ABC transporter-like VA249_40730 IPR003593 AAA+ ATPase domain VA249_40750 IPR019885 Transcription regulator HTH, AsnC-type, conserved site VA249_40750 IPR019888 Transcription regulator AsnC-type VA249_40750 IPR000485 AsnC-type HTH domain VA249_40750 IPR011991 ArsR-like helix-turn-helix domain VA249_40750 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_40750 IPR036390 Winged helix DNA-binding domain superfamily VA249_40750 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VA249_40750 IPR011008 Dimeric alpha-beta barrel VA249_40800 IPR038377 Sodium/glucose symporter superfamily VA249_40800 IPR001734 Sodium/solute symporter VA249_40800 IPR018212 Sodium/solute symporter, conserved site VA249_40800 IPR011851 Sodium/proline symporter VA249_40820 IPR010985 Ribbon-helix-helix VA249_40820 IPR002872 Proline dehydrogenase domain VA249_40820 IPR024082 Proline dehydrogenase PutA, domain II VA249_40820 IPR024089 Proline dehydrogenase PutA, domain I/II VA249_40820 IPR024090 Proline dehydrogenase PutA, domain I VA249_40820 IPR041349 Proline utilization A proline dehydrogenase N-terminal domain VA249_40820 IPR029041 FAD-linked oxidoreductase-like VA249_40820 IPR025703 Bifunctional protein PutA VA249_40820 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 VA249_40820 IPR015590 Aldehyde dehydrogenase domain VA249_40820 IPR016162 Aldehyde dehydrogenase, N-terminal VA249_40820 IPR029510 Aldehyde dehydrogenase, glutamic acid active site VA249_40820 IPR016160 Aldehyde dehydrogenase, cysteine active site VA249_40820 IPR016163 Aldehyde dehydrogenase, C-terminal VA249_40820 IPR016161 Aldehyde/histidinol dehydrogenase VA249_40820 IPR013321 Arc-type ribbon-helix-helix VA249_40830 IPR011051 RmlC-like cupin domain superfamily VA249_40830 IPR009057 Homeobox-like domain superfamily VA249_40830 IPR018060 DNA binding HTH domain, AraC-type VA249_40830 IPR018062 HTH domain AraC-type, conserved site VA249_40830 IPR020449 Transcription regulator HTH, AraC- type VA249_40830 IPR014710 RmlC-like jelly roll fold VA249_40850 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative VA249_40850 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site VA249_40850 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal VA249_40850 IPR012349 FMN-binding split barrel VA249_40850 IPR000659 Pyridoxamine 5'-phosphate oxidase VA249_40860 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VA249_40860 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily VA249_40860 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain VA249_40860 IPR005467 Histidine kinase domain VA249_40860 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VA249_40860 IPR003594 Histidine kinase/HSP90-like ATPase VA249_40860 IPR033479 Double Cache domain 1 VA249_40860 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) VA249_40860 IPR029151 Periplasmic sensor-like domain superfamily VA249_40870 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VA249_40870 IPR003593 AAA+ ATPase domain VA249_40870 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VA249_40870 IPR002078 RNA polymerase sigma factor 54 interaction domain VA249_40870 IPR001789 Signal transduction response regulator, receiver domain VA249_40870 IPR025944 Sigma-54 interaction domain, conserved site VA249_40870 IPR002197 DNA binding HTH domain, Fis-type VA249_40870 IPR009057 Homeobox-like domain superfamily VA249_40870 IPR011006 CheY-like superfamily VA249_40870 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_40890 IPR006144 Secretion protein HlyD, conserved site VA249_40890 IPR010129 Type I secretion membrane fusion protein, HlyD family VA249_40920 IPR010132 ATPase, type I secretion system, HlyB VA249_40920 IPR003593 AAA+ ATPase domain VA249_40920 IPR011527 ABC transporter type 1, transmembrane domain VA249_40920 IPR036640 ABC transporter type 1, transmembrane domain superfamily VA249_40920 IPR003439 ABC transporter-like VA249_40920 IPR017871 ABC transporter, conserved site VA249_40920 IPR005074 Peptidase C39, bacteriocin processing VA249_40920 IPR039421 Type I protein exporter VA249_40920 IPR039395 Peptidase C39-like A VA249_40920 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_40930 IPR039421 Type I protein exporter VA249_40930 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_40930 IPR011917 ABC transporter, lipid A export, MsbA VA249_40930 IPR003439 ABC transporter-like VA249_40930 IPR036640 ABC transporter type 1, transmembrane domain superfamily VA249_40930 IPR011527 ABC transporter type 1, transmembrane domain VA249_40930 IPR017871 ABC transporter, conserved site VA249_40930 IPR003593 AAA+ ATPase domain VA249_40950 IPR039424 Solute-binding protein family 5 VA249_40950 IPR030678 Peptide/nickel binding protein, MppA-type VA249_40950 IPR023765 Solute-binding protein family 5, conserved site VA249_40950 IPR000914 Solute-binding protein family 5 domain VA249_40960 IPR001451 Hexapeptide repeat VA249_40960 IPR018357 Hexapeptide transferase, conserved site VA249_40960 IPR011004 Trimeric LpxA-like superfamily VA249_40980 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_40980 IPR032672 TmcA/NAT10/Kre33 VA249_40980 IPR024914 tRNA(Met) cytidine acetyltransferase TmcA VA249_40980 IPR000182 GNAT domain VA249_40980 IPR007807 Helicase domain VA249_40980 IPR016181 Acyl-CoA N-acyltransferase VA249_40990 IPR004437 ParB/RepB/Spo0J partition protein VA249_40990 IPR003115 ParB/Sulfiredoxin VA249_40990 IPR036086 ParB/Sulfiredoxin superfamily VA249_40990 IPR014884 ParB protein family, C-terminal VA249_41000 IPR025669 AAA domain VA249_41000 IPR041250 ParA helix turn helix domain VA249_41000 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_41040 IPR017856 Integrase-like, N-terminal VA249_41040 IPR029072 YebC-like VA249_41040 IPR026564 Transcriptional regulator TACO1-like, domain 3 VA249_41040 IPR002876 Transcriptional regulator TACO1-like VA249_41050 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA VA249_41050 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB VA249_41050 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site VA249_41070 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VA249_41070 IPR022871 Para-hydroxybenzoic acid efflux pump, subunit AaeA VA249_41070 IPR006143 RND efflux pump, membrane fusion protein VA249_41080 IPR036390 Winged helix DNA-binding domain superfamily VA249_41080 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_41080 IPR000847 Transcription regulator HTH, LysR VA249_41080 IPR005119 LysR, substrate-binding VA249_41100 IPR011924 Lipoprotein releasing system, ATP-binding protein VA249_41100 IPR003439 ABC transporter-like VA249_41100 IPR003593 AAA+ ATPase domain VA249_41100 IPR017871 ABC transporter, conserved site VA249_41100 IPR015854 ABC transporter, lipoprotein release, LolD VA249_41100 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_41140 IPR010559 Signal transduction histidine kinase, internal region VA249_41140 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VA249_41140 IPR003594 Histidine kinase/HSP90-like ATPase VA249_41140 IPR003018 GAF domain VA249_41140 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region VA249_41150 IPR011006 CheY-like superfamily VA249_41150 IPR001789 Signal transduction response regulator, receiver domain VA249_41150 IPR007492 LytTR DNA-binding domain VA249_41170 IPR029000 Cyclophilin-like domain superfamily VA249_41170 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase VA249_41170 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain VA249_41170 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site VA249_41210 IPR017937 Thioredoxin, conserved site VA249_41210 IPR036249 Thioredoxin-like superfamily VA249_41210 IPR013740 Redoxin VA249_41210 IPR013766 Thioredoxin domain VA249_41220 IPR003782 Copper chaperone SCO1/SenC VA249_41220 IPR036249 Thioredoxin-like superfamily VA249_41280 IPR005119 LysR, substrate-binding VA249_41280 IPR000847 Transcription regulator HTH, LysR VA249_41280 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_41280 IPR036390 Winged helix DNA-binding domain superfamily VA249_41300 IPR004445 Sodium/glutamate symport carrier protein GltS VA249_41320 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_41320 IPR003439 ABC transporter-like VA249_41320 IPR003593 AAA+ ATPase domain VA249_41330 IPR004445 Sodium/glutamate symport carrier protein GltS VA249_41340 IPR024607 Sulfatase, conserved site VA249_41340 IPR035874 Iduronate-2-sulfatase VA249_41340 IPR017850 Alkaline-phosphatase-like, core domain superfamily VA249_41340 IPR000917 Sulfatase, N-terminal VA249_41360 IPR039174 Chondroitin sulfate ABC lyase VA249_41360 IPR015176 Lyase, N-terminal VA249_41360 IPR015177 Lyase, catalytic VA249_41360 IPR003159 Polysaccharide lyase family 8, central domain VA249_41360 IPR004103 Polysaccharide lyase family 8, C-terminal VA249_41360 IPR011071 Polysaccharide lyase family 8-like, C-terminal VA249_41360 IPR014718 Glycoside hydrolase-type carbohydrate-binding VA249_41360 IPR011013 Galactose mutarotase-like domain superfamily VA249_41360 IPR024200 Chondroitin sulfate ABC endolyase VA249_41360 IPR008929 Chondroitin AC/alginate lyase VA249_41360 IPR008979 Galactose-binding-like domain superfamily VA249_41370 IPR023885 4Fe4S-binding SPASM domain VA249_41370 IPR013785 Aldolase-type TIM barrel VA249_41370 IPR034491 Anaerobic Ser-type sulfatase-maturating enzyme VA249_41370 IPR007197 Radical SAM VA249_41380 IPR017850 Alkaline-phosphatase-like, core domain superfamily VA249_41380 IPR024607 Sulfatase, conserved site VA249_41380 IPR000917 Sulfatase, N-terminal VA249_41400 IPR013785 Aldolase-type TIM barrel VA249_41400 IPR023955 D-tagatose-bisphosphate aldolase, class II, subunit GatY VA249_41400 IPR011288 D-tagatose-bisphosphate aldolase, class II, subunit KbaY/GatY VA249_41400 IPR000771 Fructose-bisphosphate aldolase, class-II VA249_41410 IPR011611 Carbohydrate kinase PfkB VA249_41410 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site VA249_41410 IPR029056 Ribokinase-like VA249_41420 IPR013785 Aldolase-type TIM barrel VA249_41420 IPR031337 KDPG/KHG aldolase, active site 1 VA249_41420 IPR031338 KDPG/KHG aldolase, active site 2 VA249_41420 IPR000887 KDPG/KHG aldolase VA249_41480 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VA249_41480 IPR001036 Acriflavin resistance protein VA249_41490 IPR022871 Para-hydroxybenzoic acid efflux pump, subunit AaeA VA249_41490 IPR006143 RND efflux pump, membrane fusion protein VA249_41490 IPR039562 Membrane fusion protein, biotin-lipoyl like domain VA249_41520 IPR003159 Polysaccharide lyase family 8, central domain VA249_41520 IPR014718 Glycoside hydrolase-type carbohydrate-binding VA249_41520 IPR008979 Galactose-binding-like domain superfamily VA249_41520 IPR015177 Lyase, catalytic VA249_41520 IPR015176 Lyase, N-terminal VA249_41520 IPR004103 Polysaccharide lyase family 8, C-terminal VA249_41520 IPR011071 Polysaccharide lyase family 8-like, C-terminal VA249_41520 IPR011013 Galactose mutarotase-like domain superfamily VA249_41520 IPR008929 Chondroitin AC/alginate lyase VA249_41520 IPR039174 Chondroitin sulfate ABC lyase VA249_41520 IPR024200 Chondroitin sulfate ABC endolyase VA249_41530 IPR015176 Lyase, N-terminal VA249_41530 IPR003159 Polysaccharide lyase family 8, central domain VA249_41530 IPR004103 Polysaccharide lyase family 8, C-terminal VA249_41530 IPR011071 Polysaccharide lyase family 8-like, C-terminal VA249_41530 IPR014718 Glycoside hydrolase-type carbohydrate-binding VA249_41530 IPR015177 Lyase, catalytic VA249_41530 IPR011013 Galactose mutarotase-like domain superfamily VA249_41530 IPR024200 Chondroitin sulfate ABC endolyase VA249_41530 IPR008929 Chondroitin AC/alginate lyase VA249_41530 IPR039174 Chondroitin sulfate ABC lyase VA249_41530 IPR008979 Galactose-binding-like domain superfamily VA249_41560 IPR025668 Transposase DDE domain VA249_41590 IPR000917 Sulfatase, N-terminal VA249_41590 IPR017850 Alkaline-phosphatase-like, core domain superfamily VA249_41600 IPR018356 Transcription regulator, HTH DeoR-type, conserved site VA249_41600 IPR037171 NagB/RpiA transferase-like VA249_41600 IPR001034 DeoR-type HTH domain VA249_41600 IPR014036 DeoR C-terminal sensor domain VA249_41600 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_41600 IPR036390 Winged helix DNA-binding domain superfamily VA249_41610 IPR013785 Aldolase-type TIM barrel VA249_41610 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ-like VA249_41610 IPR023435 D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit KbaZ VA249_41620 IPR035466 GlmS/AgaS, SIS domain 1 VA249_41620 IPR001347 Sugar isomerase (SIS) VA249_41620 IPR035464 AgaS, SIS domain VA249_41620 IPR014180 Sugar isomerase, AgaS VA249_41630 IPR004720 Phosphotransferase system, sorbose subfamily IIB component VA249_41630 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup VA249_41630 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily VA249_41640 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit VA249_41650 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component VA249_41660 IPR004701 Phosphotransferase system, mannose-type IIA component VA249_41660 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily VA249_41660 IPR033887 PTS system mannose/sorbose specific IIA subunit VA249_41670 IPR032466 Metal-dependent hydrolase VA249_41670 IPR003764 N-acetylglucosamine-6-phosphate deacetylase VA249_41670 IPR011059 Metal-dependent hydrolase, composite domain superfamily VA249_41670 IPR006680 Amidohydrolase-related VA249_41680 IPR011051 RmlC-like cupin domain superfamily VA249_41680 IPR021120 KduI/IolB isomerase VA249_41680 IPR027449 5-keto-4-deoxyuronate isomerase, N-terminal VA249_41680 IPR014710 RmlC-like jelly roll fold VA249_41680 IPR007045 5-keto 4-deoxyuronate isomerase VA249_41690 IPR011286 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase VA249_41690 IPR036291 NAD(P)-binding domain superfamily VA249_41690 IPR020904 Short-chain dehydrogenase/reductase, conserved site VA249_41690 IPR002347 Short-chain dehydrogenase/reductase SDR VA249_41700 IPR012341 Six-hairpin glycosidase-like superfamily VA249_41700 IPR008928 Six-hairpin glycosidase superfamily VA249_41700 IPR010905 Glycosyl hydrolase, family 88 VA249_41720 IPR004547 Glucosamine-6-phosphate isomerase VA249_41720 IPR018321 Glucosamine-6-phosphate isomerase, conserved site VA249_41720 IPR037171 NagB/RpiA transferase-like VA249_41720 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase VA249_41750 IPR005119 LysR, substrate-binding VA249_41750 IPR000847 Transcription regulator HTH, LysR VA249_41750 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_41750 IPR036390 Winged helix DNA-binding domain superfamily VA249_41750 IPR020890 Transcription regulator HTH, HdfR VA249_41780 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal VA249_41780 IPR003265 HhH-GPD domain VA249_41780 IPR011257 DNA glycosylase VA249_41780 IPR000035 Alkylbase DNA glycosidase, conserved site VA249_41780 IPR037046 DNA-3-methyladenine glycosylase AlkA, N-terminal domain superfamily VA249_41780 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal VA249_41790 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_41790 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily VA249_41790 IPR023546 Methylated-DNA--protein-cysteine methyltransferase VA249_41790 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain VA249_41790 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain VA249_41790 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding VA249_41790 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site VA249_41810 IPR003740 Uncharacterised membrane protein YitT VA249_41820 IPR004680 Citrate transporter-like domain VA249_41820 IPR004672 Na+/H+ antiporter NhaD VA249_41830 IPR011248 Serine/alanine racemase VA249_41830 IPR029066 PLP-binding barrel VA249_41830 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site VA249_41830 IPR000821 Alanine racemase VA249_41830 IPR011079 Alanine racemase, C-terminal VA249_41830 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal VA249_41830 IPR002656 Acyltransferase 3 VA249_41830 IPR001608 Alanine racemase, N-terminal VA249_41870 IPR009664 Pyrimidine/purine nucleoside phosphorylase VA249_41870 IPR014710 RmlC-like jelly roll fold VA249_41870 IPR011051 RmlC-like cupin domain superfamily VA249_41890 IPR003593 AAA+ ATPase domain VA249_41890 IPR017922 sn-Glycerol-3-phosphate import ATP-binding protein UgpC VA249_41890 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_41890 IPR040582 MalK, OB fold domain VA249_41890 IPR008995 Molybdate/tungstate binding, C-terminal VA249_41890 IPR017871 ABC transporter, conserved site VA249_41890 IPR003439 ABC transporter-like VA249_41920 IPR003439 ABC transporter-like VA249_41920 IPR003593 AAA+ ATPase domain VA249_41920 IPR017871 ABC transporter, conserved site VA249_41920 IPR008995 Molybdate/tungstate binding, C-terminal VA249_41920 IPR040582 MalK, OB fold domain VA249_41920 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_41920 IPR017922 sn-Glycerol-3-phosphate import ATP-binding protein UgpC VA249_41940 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VA249_41940 IPR035906 MetI-like superfamily VA249_41950 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VA249_41950 IPR035906 MetI-like superfamily VA249_41960 IPR001000 Glycoside hydrolase family 10 domain VA249_41960 IPR017853 Glycoside hydrolase superfamily VA249_41970 IPR005102 Carbohydrate binding X2 domain VA249_41970 IPR040946 Endoglucanase B, carbohydrate binding domain VA249_41970 IPR018087 Glycoside hydrolase, family 5, conserved site VA249_41970 IPR016282 Glycoside hydrolase, family 5, endoglucanase B VA249_41970 IPR017853 Glycoside hydrolase superfamily VA249_41970 IPR013783 Immunoglobulin-like fold VA249_41970 IPR014756 Immunoglobulin E-set VA249_41970 IPR001547 Glycoside hydrolase, family 5 VA249_41980 IPR013458 Aldose 1-epimerase, bacterial VA249_41980 IPR015443 Aldose 1-epimerase VA249_41980 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase VA249_41980 IPR011013 Galactose mutarotase-like domain superfamily VA249_41980 IPR014718 Glycoside hydrolase-type carbohydrate-binding VA249_41980 IPR018052 Aldose 1-epimerase, conserved site VA249_41990 IPR013783 Immunoglobulin-like fold VA249_41990 IPR002772 Glycoside hydrolase family 3 C-terminal domain VA249_41990 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily VA249_41990 IPR001764 Glycoside hydrolase, family 3, N-terminal VA249_41990 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily VA249_41990 IPR017853 Glycoside hydrolase superfamily VA249_41990 IPR026891 Fibronectin type III-like domain VA249_42000 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily VA249_42000 IPR041542 Beta-xylosidase, C-terminal Concanavalin A-like domain VA249_42000 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily VA249_42000 IPR006710 Glycoside hydrolase, family 43 VA249_42050 IPR013986 DExx box DNA helicase domain superfamily VA249_42050 IPR014017 UvrD-like DNA helicase, C-terminal VA249_42050 IPR000212 DNA helicase, UvrD/REP type VA249_42050 IPR005752 ATP-dependent DNA helicase Rep VA249_42050 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_42050 IPR014016 UvrD-like helicase, ATP-binding domain VA249_42050 IPR034739 UvrD/AddA helicase, N-terminal VA249_42420 IPR005467 Histidine kinase domain VA249_42420 IPR011006 CheY-like superfamily VA249_42420 IPR003660 HAMP domain VA249_42420 IPR003594 Histidine kinase/HSP90-like ATPase VA249_42420 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VA249_42420 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain VA249_42420 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily VA249_42420 IPR036641 HPT domain superfamily VA249_42420 IPR033414 Periplasmic sensor domain VA249_42420 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VA249_42420 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain VA249_42420 IPR001789 Signal transduction response regulator, receiver domain VA249_42480 IPR014001 Helicase superfamily 1/2, ATP-binding domain VA249_42480 IPR001650 Helicase, C-terminal VA249_42480 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_42480 IPR005259 Primosomal protein N' VA249_42480 IPR041222 Primosomal protein N', 3' DNA-binding domain VA249_42480 IPR042115 Primosomal protein N', 3' DNA-binding domain superfamily VA249_42480 IPR041236 Primosomal protein N, C-terminal domain VA249_42480 IPR011545 DEAD/DEAH box helicase domain VA249_42480 IPR040498 PriA DNA helicase, Cys-rich region (CRR) domain VA249_42710 IPR014016 UvrD-like helicase, ATP-binding domain VA249_42710 IPR034739 UvrD/AddA helicase, N-terminal VA249_42710 IPR013986 DExx box DNA helicase domain superfamily VA249_42710 IPR000212 DNA helicase, UvrD/REP type VA249_42710 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_42710 IPR014017 UvrD-like DNA helicase, C-terminal VA249_42910 IPR001972 Stomatin family VA249_42910 IPR032435 Band 7, C-terminal extension VA249_42910 IPR018080 Band 7/stomatin-like, conserved site VA249_42910 IPR001107 Band 7 domain VA249_42910 IPR036013 Band 7/SPFH domain superfamily VA249_42970 IPR012337 Ribonuclease H-like superfamily VA249_42970 IPR022894 Oligoribonuclease VA249_42970 IPR013520 Exonuclease, RNase T/DNA polymerase III VA249_42970 IPR036397 Ribonuclease H superfamily VA249_43150 IPR036775 DNA polymerase, Y-family, little finger domain superfamily VA249_43150 IPR017961 DNA polymerase, Y-family, little finger domain VA249_43150 IPR022880 DNA polymerase IV VA249_43150 IPR001126 UmuC domain VA249_43170 IPR009057 Homeobox-like domain superfamily VA249_43170 IPR002514 Transposase IS3/IS911family VA249_43180 IPR036397 Ribonuclease H superfamily VA249_43180 IPR038965 Transposase InsF-like VA249_43180 IPR001584 Integrase, catalytic core VA249_43180 IPR012337 Ribonuclease H-like superfamily VA249_43200 IPR018306 Bacteriophage T5, Orf172 DNA-binding VA249_43210 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_43210 IPR014001 Helicase superfamily 1/2, ATP-binding domain VA249_43220 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VA249_43300 IPR023650 Beta-lactamase, class-A active site VA249_43300 IPR000871 Beta-lactamase, class-A VA249_43300 IPR012338 Beta-lactamase/transpeptidase-like VA249_43410 IPR002052 DNA methylase, N-6 adenine-specific, conserved site VA249_43410 IPR001091 Restriction/modification DNA-methylase VA249_43410 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VA249_43410 IPR002941 DNA methylase N-4/N-6 VA249_43440 IPR000150 Cof family VA249_43440 IPR036412 HAD-like superfamily VA249_43440 IPR006379 HAD-superfamily hydrolase, subfamily IIB VA249_43440 IPR023214 HAD superfamily VA249_43450 IPR003313 AraC-type arabinose-binding/dimerisation domain VA249_43450 IPR009057 Homeobox-like domain superfamily VA249_43450 IPR018060 DNA binding HTH domain, AraC-type VA249_43450 IPR018062 HTH domain AraC-type, conserved site VA249_43450 IPR020449 Transcription regulator HTH, AraC- type VA249_43450 IPR037923 Transcription regulator HTH-like VA249_43470 IPR024664 L-arabinose isomerase, C-terminal VA249_43470 IPR038583 L-arabinose isomerase, N-terminal domain superfamily VA249_43470 IPR004216 L-fucose/L-arabinose isomerase, C-terminal VA249_43470 IPR009015 L-fucose isomerase, N-terminal/central domain superfamily VA249_43470 IPR003762 L-arabinose isomerase VA249_43480 IPR023499 L-ribulose-5-phosphate 4-epimerase UlaF VA249_43480 IPR001303 Class II aldolase/adducin N-terminal VA249_43480 IPR036409 Class II aldolase/adducin N-terminal domain superfamily VA249_43490 IPR000577 Carbohydrate kinase, FGGY VA249_43490 IPR018485 Carbohydrate kinase, FGGY, C-terminal VA249_43490 IPR018484 Carbohydrate kinase, FGGY, N-terminal VA249_43490 IPR005929 Ribulokinase VA249_43510 IPR026266 L-arabinose-binding periplasmic protein VA249_43510 IPR028082 Periplasmic binding protein-like I VA249_43510 IPR001761 Periplasmic binding protein/LacI sugar binding domain VA249_43520 IPR003593 AAA+ ATPase domain VA249_43520 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_43520 IPR017917 ABC transporter, arabinose import, ATP-binding protein, AraG VA249_43520 IPR017871 ABC transporter, conserved site VA249_43520 IPR003439 ABC transporter-like VA249_43530 IPR001851 ABC transporter, permease VA249_43550 IPR036397 Ribonuclease H superfamily VA249_43550 IPR012337 Ribonuclease H-like superfamily VA249_43550 IPR001584 Integrase, catalytic core VA249_43550 IPR025948 HTH-like domain VA249_43570 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain VA249_43570 IPR003660 HAMP domain VA249_43570 IPR004090 Chemotaxis methyl-accepting receptor VA249_43570 IPR000727 Target SNARE coiled-coil homology domain VA249_43570 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VA249_43580 IPR019741 Galactokinase, conserved site VA249_43580 IPR022963 Galactokinase, bacterial VA249_43580 IPR020568 Ribosomal protein S5 domain 2-type fold VA249_43580 IPR006206 Mevalonate/galactokinase VA249_43580 IPR006203 GHMP kinase, ATP-binding, conserved site VA249_43580 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VA249_43580 IPR036554 GHMP kinase, C-terminal domain superfamily VA249_43580 IPR013750 GHMP kinase, C-terminal domain VA249_43580 IPR000705 Galactokinase VA249_43580 IPR006204 GHMP kinase N-terminal domain VA249_43580 IPR019539 Galactokinase galactose-binding domain VA249_43590 IPR036265 HIT-like superfamily VA249_43590 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal VA249_43590 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal VA249_43590 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site VA249_43590 IPR001937 Galactose-1-phosphate uridyl transferase, class I VA249_43600 IPR005886 UDP-glucose 4-epimerase VA249_43600 IPR036291 NAD(P)-binding domain superfamily VA249_43600 IPR016040 NAD(P)-binding domain VA249_43610 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VA249_43610 IPR000727 Target SNARE coiled-coil homology domain VA249_43610 IPR004090 Chemotaxis methyl-accepting receptor VA249_43610 IPR003660 HAMP domain VA249_43610 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain VA249_43630 IPR038717 Tc1-like transposase, DDE domain VA249_43640 IPR023738 Maltoporin VA249_43640 IPR003192 Porin, LamB-type VA249_43640 IPR036998 Porin, LamB-type superfamily VA249_43650 IPR023738 Maltoporin VA249_43650 IPR003192 Porin, LamB-type VA249_43650 IPR036998 Porin, LamB-type superfamily VA249_43660 IPR017853 Glycoside hydrolase superfamily VA249_43660 IPR013780 Glycosyl hydrolase, all-beta VA249_43660 IPR013529 Glycoside hydrolase, family 42, N-terminal VA249_43660 IPR003476 Glycoside hydrolase, family 42 VA249_43660 IPR029062 Class I glutamine amidotransferase-like VA249_43660 IPR013738 Beta-galactosidase trimerisation VA249_43660 IPR013739 Beta-galactosidase C-terminal VA249_43670 IPR011683 Glycosyl hydrolase family 53 VA249_43670 IPR017853 Glycoside hydrolase superfamily VA249_43680 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VA249_43680 IPR035906 MetI-like superfamily VA249_43690 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VA249_43690 IPR035906 MetI-like superfamily VA249_43700 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein VA249_43700 IPR006059 Bacterial extracellular solute-binding protein VA249_43710 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_43710 IPR040582 MalK, OB fold domain VA249_43710 IPR008995 Molybdate/tungstate binding, C-terminal VA249_43710 IPR017871 ABC transporter, conserved site VA249_43710 IPR015855 ABC transporter, maltose/maltodextrin import, MalK VA249_43710 IPR003593 AAA+ ATPase domain VA249_43710 IPR003439 ABC transporter-like VA249_43720 IPR000843 LacI-type HTH domain VA249_43720 IPR010982 Lambda repressor-like, DNA-binding domain superfamily VA249_43720 IPR028082 Periplasmic binding protein-like I VA249_43730 IPR017853 Glycoside hydrolase superfamily VA249_43730 IPR011683 Glycosyl hydrolase family 53 VA249_43740 IPR023210 NADP-dependent oxidoreductase domain VA249_43740 IPR036812 NADP-dependent oxidoreductase domain superfamily VA249_43750 IPR023210 NADP-dependent oxidoreductase domain VA249_43750 IPR036812 NADP-dependent oxidoreductase domain superfamily VA249_43790 IPR012337 Ribonuclease H-like superfamily VA249_43790 IPR032874 DDE domain VA249_43790 IPR001584 Integrase, catalytic core VA249_43790 IPR036397 Ribonuclease H superfamily VA249_43800 IPR001707 Chloramphenicol acetyltransferase VA249_43800 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily VA249_43800 IPR018372 Chloramphenicol acetyltransferase, active site VA249_43810 IPR002559 Transposase, IS4-like VA249_43810 IPR008490 Transposase InsH, N-terminal VA249_43830 IPR006390 Dihydropteroate synthase VA249_43830 IPR011005 Dihydropteroate synthase-like VA249_43830 IPR000489 Pterin-binding domain VA249_43840 IPR036259 MFS transporter superfamily VA249_43840 IPR004751 Drug antiporter protein VA249_43840 IPR011701 Major facilitator superfamily VA249_43840 IPR020846 Major facilitator superfamily domain VA249_44000 IPR035650 Tetracycline resistance protein, C-terminal VA249_44000 IPR005225 Small GTP-binding protein domain VA249_44000 IPR009000 Translation protein, beta-barrel domain superfamily VA249_44000 IPR000795 Transcription factor, GTP-binding domain VA249_44000 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VA249_44000 IPR005517 Translation elongation factor EFG/EF2, domain IV VA249_44000 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_44000 IPR041095 Elongation Factor G, domain II VA249_44000 IPR035647 EF-G domain III/V-like VA249_44000 IPR020568 Ribosomal protein S5 domain 2-type fold VA249_44000 IPR031157 Tr-type G domain, conserved site VA249_44000 IPR000640 Elongation factor EFG, domain V-like VA249_44020 IPR009057 Homeobox-like domain superfamily VA249_44020 IPR018060 DNA binding HTH domain, AraC-type VA249_44020 IPR018062 HTH domain AraC-type, conserved site VA249_44030 IPR009057 Homeobox-like domain superfamily VA249_44030 IPR001647 DNA-binding HTH domain, TetR-type VA249_44030 IPR023772 DNA-binding HTH domain, TetR-type, conserved site VA249_44040 IPR011701 Major facilitator superfamily VA249_44040 IPR020846 Major facilitator superfamily domain VA249_44040 IPR036259 MFS transporter superfamily VA249_44040 IPR005829 Sugar transporter, conserved site VA249_44040 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG VA249_44050 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily VA249_44050 IPR004111 Tetracycline repressor TetR, C-terminal VA249_44050 IPR003012 Tetracycline transcriptional regulator, TetR VA249_44050 IPR001647 DNA-binding HTH domain, TetR-type VA249_44050 IPR023772 DNA-binding HTH domain, TetR-type, conserved site VA249_44050 IPR009057 Homeobox-like domain superfamily VA249_44060 IPR011991 ArsR-like helix-turn-helix domain VA249_44060 IPR001845 HTH ArsR-type DNA-binding domain VA249_44060 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_44060 IPR036390 Winged helix DNA-binding domain superfamily VA249_44090 IPR004445 Sodium/glutamate symport carrier protein GltS VA249_44260 IPR035906 MetI-like superfamily VA249_44260 IPR000515 ABC transporter type 1, transmembrane domain MetI-like VA249_44330 IPR003593 AAA+ ATPase domain VA249_44330 IPR003439 ABC transporter-like VA249_44330 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_44580 IPR025669 AAA domain VA249_44580 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_44870 IPR034202 Subtilisin Carlsberg-like catalytic domain VA249_44870 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily VA249_44870 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 VA249_44870 IPR015500 Peptidase S8, subtilisin-related VA249_44870 IPR023827 Peptidase S8, subtilisin, Asp-active site VA249_44870 IPR022398 Peptidase S8, subtilisin, His-active site VA249_44870 IPR000209 Peptidase S8/S53 domain VA249_44870 IPR023828 Peptidase S8, subtilisin, Ser-active site VA249_44870 IPR036852 Peptidase S8/S53 domain superfamily VA249_45060 IPR012310 DNA ligase, ATP-dependent, central VA249_45060 IPR016059 DNA ligase, ATP-dependent, conserved site VA249_45060 IPR029319 DNA ligase, OB-like domain VA249_45060 IPR012340 Nucleic acid-binding, OB-fold VA249_45170 IPR010927 Type IV conjugative transfer system protein TraH VA249_45220 IPR009329 Protein of unknown function DUF987 VA249_45350 IPR003593 AAA+ ATPase domain VA249_45350 IPR011704 ATPase, dynein-related, AAA domain VA249_45350 IPR013615 CbbQ/NirQ/NorQ, C-terminal VA249_45350 IPR001270 ClpA/B family VA249_45350 IPR027417 P-loop containing nucleoside triphosphate hydrolase VA249_45430 IPR004107 Integrase, SAM-like, N-terminal VA249_45430 IPR010998 Integrase/recombinase, N-terminal VA249_45430 IPR002104 Integrase, catalytic domain VA249_45430 IPR011010 DNA breaking-rejoining enzyme, catalytic core VA249_45430 IPR013762 Integrase-like, catalytic domain superfamily VA249_45580 IPR014121 Type-F conjugative transfer system mating-pair stabilisation protein TraN VA249_45620 IPR009649 TraU VA249_45690 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI VA249_46110 IPR036390 Winged helix DNA-binding domain superfamily VA249_46110 IPR036388 Winged helix-like DNA-binding domain superfamily VA249_46110 IPR015927 Peptidase S24/S26A/S26B/S26C VA249_46110 IPR006197 Peptidase S24, LexA-like VA249_46110 IPR006199 LexA repressor, DNA-binding domain VA249_46110 IPR039418 LexA-like VA249_46110 IPR006200 Transcription regulator LexA VA249_46110 IPR036286 LexA/Signal peptidase-like superfamily VA249_46120 IPR024728 DNA polymerase type-Y, HhH motif VA249_46120 IPR036775 DNA polymerase, Y-family, little finger domain superfamily VA249_46120 IPR017961 DNA polymerase, Y-family, little finger domain VA249_46120 IPR025188 Domain of unknown function DUF4113 VA249_46120 IPR001126 UmuC domain