locus-tag class description D1115_00005 PF00258 Flavodoxin D1115_00010 PF01926 50S ribosome-binding GTPase D1115_00010 PF12631 MnmE helical domain D1115_00010 PF10396 GTP-binding protein TrmE N-terminus D1115_00015 PF02096 60Kd inner membrane protein D1115_00015 PF14849 YidC periplasmic domain D1115_00020 PF01809 Putative membrane protein insertion efficiency factor D1115_00025 PF00825 Ribonuclease P D1115_00030 PF00468 Ribosomal protein L34 D1115_00035 PF00005 ABC transporter D1115_00040 PF00528 Binding-protein-dependent transport system inner membrane component D1115_00045 PF00497 Bacterial extracellular solute-binding proteins, family 3 D1115_00055 PF11638 DnaA N-terminal domain D1115_00055 PF08299 Bacterial dnaA protein helix-turn-helix D1115_00055 PF00308 Bacterial dnaA protein D1115_00060 PF00712 DNA polymerase III beta subunit, N-terminal domain D1115_00060 PF02768 DNA polymerase III beta subunit, C-terminal domain D1115_00060 PF02767 DNA polymerase III beta subunit, central domain D1115_00070 PF01751 Toprim domain D1115_00070 PF00204 DNA gyrase B D1115_00070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1115_00070 PF00986 DNA gyrase B subunit, carboxyl terminus D1115_00070 PF18053 DNA gyrase B subunit insert domain D1115_00080 PF00011 Hsp20/alpha crystallin family D1115_00085 PF00155 Aminotransferase class I and II D1115_00090 PF02092 Glycyl-tRNA synthetase beta subunit D1115_00090 PF05746 DALR anticodon binding domain D1115_00095 PF02091 Glycyl-tRNA synthetase alpha subunit D1115_00100 PF01169 Uncharacterized protein family UPF0016 D1115_00110 PF01206 Sulfurtransferase TusA D1115_00120 PF03466 LysR substrate binding domain D1115_00120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1115_00125 PF08240 Alcohol dehydrogenase GroES-like domain D1115_00125 PF00107 Zinc-binding dehydrogenase D1115_00130 PF00108 Thiolase, N-terminal domain D1115_00130 PF02803 Thiolase, C-terminal domain D1115_00135 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain D1115_00135 PF00378 Enoyl-CoA hydratase/isomerase D1115_00135 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain D1115_00145 PF02386 Cation transport protein D1115_00150 PF12724 Flavodoxin domain D1115_00205 PF02537 CrcB-like protein, Camphor Resistance (CrcB) D1115_00210 PF01964 Radical SAM ThiC family D1115_00210 PF13667 ThiC-associated domain D1115_00215 PF02581 Thiamine monophosphate synthase D1115_00220 PF00899 ThiF family D1115_00225 PF02597 ThiS family D1115_00230 PF05690 Thiazole biosynthesis protein ThiG D1115_00235 PF06968 Biotin and Thiamin Synthesis associated domain D1115_00235 PF04055 Radical SAM superfamily D1115_00240 PF00557 Metallopeptidase family M24 D1115_00240 PF01321 Creatinase/Prolidase N-terminal domain D1115_00240 PF01321 Creatinase/Prolidase N-terminal domain D1115_00240 PF00557 Metallopeptidase family M24 D1115_00245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1115_00245 PF03466 LysR substrate binding domain D1115_00250 PF07690 Major Facilitator Superfamily D1115_00270 PF05114 Protein of unknown function (DUF692) D1115_00280 PF00580 UvrD/REP helicase N-terminal domain D1115_00280 PF13361 UvrD-like helicase C-terminal domain D1115_00295 PF01810 LysE type translocator D1115_00305 PF00892 EamA-like transporter family D1115_00310 PF16124 RecQ zinc-binding D1115_00310 PF09382 RQC domain D1115_00310 PF00570 HRDC domain D1115_00310 PF00270 DEAD/DEAH box helicase D1115_00310 PF00271 Helicase conserved C-terminal domain D1115_00325 PF02592 Putative vitamin uptake transporter D1115_00330 PF02541 Ppx/GppA phosphatase family D1115_00335 PF00270 DEAD/DEAH box helicase D1115_00335 PF00271 Helicase conserved C-terminal domain D1115_00340 PF00085 Thioredoxin D1115_00345 PF07498 Rho termination factor, N-terminal domain D1115_00345 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D1115_00345 PF07497 Rho termination factor, RNA-binding domain D1115_00355 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase D1115_00360 PF00111 2Fe-2S iron-sulfur cluster binding domain D1115_00365 PF00175 Oxidoreductase NAD-binding domain D1115_00420 PF02602 Uroporphyrinogen-III synthase HemD D1115_00425 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain D1115_00425 PF03900 Porphobilinogen deaminase, C-terminal domain D1115_00435 PF01491 Frataxin-like domain D1115_00445 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain D1115_00445 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain D1115_00450 PF01678 Diaminopimelate epimerase D1115_00465 PF13419 Haloacid dehalogenase-like hydrolase D1115_00490 PF12146 Serine aminopeptidase, S33 D1115_00495 PF01810 LysE type translocator D1115_00500 PF01022 Bacterial regulatory protein, arsR family D1115_00505 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain D1115_00505 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain D1115_00530 PF10694 Protein of unknown function (DUF2500) D1115_00570 PF00005 ABC transporter D1115_00575 PF18075 FtsX extracellular domain D1115_00580 PF04545 Sigma-70, region 4 D1115_00580 PF04542 Sigma-70 region 2 D1115_00580 PF00140 Sigma-70 factor, region 1.2 D1115_00585 PF00581 Rhodanese-like domain D1115_00590 PF01694 Rhomboid family D1115_00590 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease D1115_00595 PF03748 Flagellar basal body-associated protein FliL D1115_00600 PF04345 Chorismate lyase D1115_00605 PF01040 UbiA prenyltransferase family D1115_00610 PF01553 Acyltransferase D1115_00620 PF00717 Peptidase S24-like D1115_00620 PF01726 LexA DNA binding domain D1115_00630 PF01554 MatE D1115_00635 PF07992 Pyridine nucleotide-disulphide oxidoreductase D1115_00635 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D1115_00640 PF00440 Bacterial regulatory proteins, tetR family D1115_00650 PF05958 tRNA (Uracil-5-)-methyltransferase D1115_00655 PF00593 TonB dependent receptor D1115_00655 PF07715 TonB-dependent Receptor Plug Domain D1115_00665 PF01177 Asp/Glu/Hydantoin racemase D1115_00715 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain D1115_00715 PF01565 FAD binding domain D1115_00720 PF03099 Biotin/lipoate A/B protein ligase family D1115_00720 PF08279 HTH domain D1115_00720 PF02237 Biotin protein ligase C terminal domain D1115_00725 PF00485 Phosphoribulokinase / Uridine kinase family D1115_00765 PF00584 SecE/Sec61-gamma subunits of protein translocation complex D1115_00770 PF00467 KOW motif D1115_00770 PF02357 Transcription termination factor nusG D1115_00775 PF03946 Ribosomal protein L11, N-terminal domain D1115_00775 PF00298 Ribosomal protein L11, RNA binding domain D1115_00780 PF00687 Ribosomal protein L1p/L10e family D1115_00785 PF00466 Ribosomal protein L10 D1115_00790 PF00542 Ribosomal protein L7/L12 C-terminal domain D1115_00790 PF16320 Ribosomal protein L7/L12 dimerisation domain D1115_00795 PF04560 RNA polymerase Rpb2, domain 7 D1115_00795 PF00562 RNA polymerase Rpb2, domain 6 D1115_00795 PF10385 RNA polymerase beta subunit external 1 domain D1115_00795 PF04565 RNA polymerase Rpb2, domain 3 D1115_00795 PF04561 RNA polymerase Rpb2, domain 2 D1115_00795 PF04563 RNA polymerase beta subunit D1115_00800 PF04997 RNA polymerase Rpb1, domain 1 D1115_00800 PF00623 RNA polymerase Rpb1, domain 2 D1115_00800 PF04983 RNA polymerase Rpb1, domain 3 D1115_00800 PF05000 RNA polymerase Rpb1, domain 4 D1115_00800 PF04998 RNA polymerase Rpb1, domain 5 D1115_00805 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ D1115_00810 PF09297 NADH pyrophosphatase zinc ribbon domain D1115_00810 PF00293 NUDIX domain D1115_00815 PF01208 Uroporphyrinogen decarboxylase (URO-D) D1115_00820 PF03167 Uracil DNA glycosylase superfamily D1115_00825 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D1115_00830 PF04222 Protein of unknown function (DUF416) D1115_00835 PF01595 Cyclin M transmembrane N-terminal domain D1115_00835 PF00571 CBS domain D1115_00840 PF00216 Bacterial DNA-binding protein D1115_00850 PF02844 Phosphoribosylglycinamide synthetase, N domain D1115_00850 PF02843 Phosphoribosylglycinamide synthetase, C domain D1115_00850 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain D1115_00855 PF01808 AICARFT/IMPCHase bienzyme D1115_00855 PF02142 MGS-like domain D1115_00870 PF18500 CadC C-terminal domain 1 D1115_00870 PF00486 Transcriptional regulatory protein, C terminal D1115_00880 PF13520 Amino acid permease D1115_00885 PF01276 Orn/Lys/Arg decarboxylase, major domain D1115_00885 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain D1115_00885 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain D1115_00960 PF13188 PAS domain D1115_00960 PF03707 Bacterial signalling protein N terminal repeat D1115_00960 PF00990 Diguanylate cyclase, GGDEF domain D1115_00960 PF00563 EAL domain D1115_00965 PF02954 Bacterial regulatory protein, Fis family D1115_00970 PF01207 Dihydrouridine synthase (Dus) D1115_00980 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain D1115_00980 PF00289 Biotin carboxylase, N-terminal domain D1115_00980 PF02785 Biotin carboxylase C-terminal domain D1115_00985 PF00364 Biotin-requiring enzyme D1115_00990 PF01220 Dehydroquinase class II D1115_00995 PF00501 AMP-binding enzyme D1115_00995 PF13193 AMP-binding enzyme C-terminal domain D1115_00995 PF16177 Acetyl-coenzyme A synthetase N-terminus D1115_01010 PF12832 MFS_1 like family D1115_01015 PF01627 Hpt domain D1115_01015 PF00512 His Kinase A (phospho-acceptor) domain D1115_01015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1115_01015 PF00672 HAMP domain D1115_01015 PF00072 Response regulator receiver domain D1115_01025 PF00474 Sodium:solute symporter family D1115_01035 PF01914 MarC family integral membrane protein D1115_01040 PF00072 Response regulator receiver domain D1115_01040 PF00196 Bacterial regulatory proteins, luxR family D1115_01045 PF02683 Cytochrome C biogenesis protein transmembrane region D1115_01045 PF11412 Disulphide bond corrector protein DsbC D1115_01050 PF03605 Anaerobic c4-dicarboxylate membrane transporter D1115_01055 PF00206 Lyase D1115_01055 PF10415 Fumarase C C-terminus D1115_01060 PF04186 FxsA cytoplasmic membrane protein D1115_01065 PF00588 SpoU rRNA Methylase family D1115_01070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1115_01070 PF00672 HAMP domain D1115_01070 PF00512 His Kinase A (phospho-acceptor) domain D1115_01070 PF16527 Two-component sensor protein CpxA, periplasmic domain D1115_01075 PF00486 Transcriptional regulatory protein, C terminal D1115_01075 PF00072 Response regulator receiver domain D1115_01080 PF07813 LTXXQ motif family protein D1115_01085 PF01545 Cation efflux family D1115_01085 PF16916 Dimerisation domain of Zinc Transporter D1115_01090 PF00365 Phosphofructokinase D1115_01095 PF01554 MatE D1115_01105 PF00166 Chaperonin 10 Kd subunit D1115_01110 PF00118 TCP-1/cpn60 chaperonin family D1115_01120 PF02308 MgtC family D1115_01125 PF04055 Radical SAM superfamily D1115_01130 PF01132 Elongation factor P (EF-P) OB domain D1115_01130 PF09285 Elongation factor P, C-terminal D1115_01130 PF08207 Elongation factor P (EF-P) KOW-like domain D1115_01135 PF02313 Fumarate reductase subunit D D1115_01140 PF02300 Fumarate reductase subunit C D1115_01145 PF13085 2Fe-2S iron-sulfur cluster binding domain D1115_01145 PF13183 4Fe-4S dicluster domain D1115_01150 PF02910 Fumarate reductase flavoprotein C-term D1115_01150 PF00890 FAD binding domain D1115_01155 PF00152 tRNA synthetases class II (D, K and N) D1115_01165 PF00440 Bacterial regulatory proteins, tetR family D1115_01165 PF08360 QacR-like protein, C-terminal region D1115_01175 PF01551 Peptidase family M23 D1115_01180 PF00132 Bacterial transferase hexapeptide (six repeats) D1115_01180 PF06426 Serine acetyltransferase, N-terminal D1115_01185 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus D1115_01185 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus D1115_01190 PF02556 Preprotein translocase subunit SecB D1115_01195 PF00581 Rhodanese-like domain D1115_01200 PF01676 Metalloenzyme superfamily D1115_01200 PF06415 BPG-independent PGAM N-terminus (iPGM_N) D1115_01210 PF02743 Cache domain D1115_01210 PF00672 HAMP domain D1115_01210 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D1115_01215 PF00939 Sodium:sulfate symporter transmembrane region D1115_01225 PF02666 Phosphatidylserine decarboxylase D1115_01230 PF03193 RsgA GTPase D1115_01235 PF00929 Exonuclease D1115_01315 PF08331 Domain of unknown function (DUF1730) D1115_01320 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE D1115_01325 PF01520 N-acetylmuramoyl-L-alanine amidase D1115_01340 PF17209 Hfq protein D1115_01345 PF16360 GTP-binding GTPase Middle Region D1115_01345 PF01926 50S ribosome-binding GTPase D1115_01345 PF13167 GTP-binding GTPase N-terminal D1115_01350 PF12221 Bacterial membrane protein N terminal D1115_01350 PF01145 SPFH domain / Band 7 family D1115_01355 PF01145 SPFH domain / Band 7 family D1115_01360 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) D1115_01365 PF00709 Adenylosuccinate synthetase D1115_01370 PF08238 Sel1 repeat D1115_01375 PF00042 Globin D1115_01375 PF00175 Oxidoreductase NAD-binding domain D1115_01375 PF00970 Oxidoreductase FAD-binding domain D1115_01380 PF02082 Transcriptional regulator D1115_01385 PF17876 Cold shock domain D1115_01385 PF00575 S1 RNA binding domain D1115_01385 PF08461 Ribonuclease R winged-helix domain D1115_01385 PF08206 Ribonuclease B OB domain D1115_01385 PF00773 RNB domain D1115_01390 PF00588 SpoU rRNA Methylase family D1115_01390 PF08032 RNA 2'-O ribose methyltransferase substrate binding D1115_01395 PF13419 Haloacid dehalogenase-like hydrolase D1115_01400 PF00579 tRNA synthetases class I (W and Y) D1115_01405 PF00117 Glutamine amidotransferase class-I D1115_01410 PF00202 Aminotransferase class-III D1115_01415 PF04958 Arginine N-succinyltransferase beta subunit D1115_01420 PF00171 Aldehyde dehydrogenase family D1115_01430 PF00027 Cyclic nucleotide-binding domain D1115_01430 PF13545 Crp-like helix-turn-helix domain D1115_01435 PF00485 Phosphoribulokinase / Uridine kinase family D1115_01440 PF06794 Uncharacterised protein family (UPF0270) D1115_01445 PF00561 alpha/beta hydrolase fold D1115_01455 PF12848 ABC transporter D1115_01455 PF00005 ABC transporter D1115_01460 PF02525 Flavodoxin-like fold D1115_01465 PF02254 TrkA-N domain D1115_01465 PF00999 Sodium/hydrogen exchanger family D1115_01475 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D1115_01485 PF01112 Asparaginase D1115_01490 PF04102 SlyX D1115_01500 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D1115_01500 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase D1115_01505 PF13309 HTH domain D1115_01505 PF08348 YheO-like PAS domain D1115_01510 PF02635 DsrE/DsrF-like family D1115_01515 PF02635 DsrE/DsrF-like family D1115_01520 PF04077 DsrH like protein D1115_01525 PF00164 Ribosomal protein S12/S23 D1115_01530 PF00177 Ribosomal protein S7p/S5e D1115_01535 PF14492 Elongation Factor G, domain II D1115_01535 PF03764 Elongation factor G, domain IV D1115_01535 PF00009 Elongation factor Tu GTP binding domain D1115_01535 PF00679 Elongation factor G C-terminus D1115_01535 PF03144 Elongation factor Tu domain 2 D1115_01545 PF04324 BFD-like [2Fe-2S] binding domain D1115_01550 PF00210 Ferritin-like domain D1115_01555 PF03949 Malic enzyme, NAD binding domain D1115_01555 PF00390 Malic enzyme, N-terminal domain D1115_01560 PF01340 Met Apo-repressor, MetJ D1115_01565 PF01053 Cys/Met metabolism PLP-dependent enzyme D1115_01570 PF00742 Homoserine dehydrogenase D1115_01570 PF00696 Amino acid kinase family D1115_01570 PF03447 Homoserine dehydrogenase, NAD binding domain D1115_01575 PF02219 Methylenetetrahydrofolate reductase D1115_01585 PF00311 Phosphoenolpyruvate carboxylase D1115_01590 PF01546 Peptidase family M20/M25/M40 D1115_01590 PF07687 Peptidase dimerisation domain D1115_01595 PF02774 Semialdehyde dehydrogenase, dimerisation domain D1115_01595 PF01118 Semialdehyde dehydrogenase, NAD binding domain D1115_01600 PF00696 Amino acid kinase family D1115_01610 PF00206 Lyase D1115_01610 PF14698 Argininosuccinate lyase C-terminal D1115_01610 PF00583 Acetyltransferase (GNAT) family D1115_01625 PF00462 Glutaredoxin D1115_01625 PF08534 Redoxin D1115_01630 PF03466 LysR substrate binding domain D1115_01630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1115_01635 PF00912 Transglycosylase D1115_01635 PF00905 Penicillin binding protein transpeptidase domain D1115_01635 PF17092 Penicillin-binding protein OB-like domain D1115_01660 PF07660 Secretin and TonB N terminus short domain D1115_01660 PF11741 AMIN domain D1115_01660 PF00263 Bacterial type II and III secretion system protein D1115_01660 PF03958 Bacterial type II/III secretion system short domain D1115_01665 PF01202 Shikimate kinase D1115_01670 PF01761 3-dehydroquinate synthase D1115_01680 PF02086 D12 class N6 adenine-specific DNA methyltransferase D1115_01685 PF00834 Ribulose-phosphate 3 epimerase family D1115_01690 PF01250 Ribosomal protein S6 D1115_01695 PF00436 Single-strand binding protein family D1115_01700 PF01084 Ribosomal protein S18 D1115_01705 PF03948 Ribosomal protein L9, C-terminal domain D1115_01705 PF01281 Ribosomal protein L9, N-terminal domain D1115_01715 PF00772 DnaB-like helicase N terminal domain D1115_01715 PF03796 DnaB-like helicase C terminal domain D1115_01720 PF00842 Alanine racemase, C-terminal domain D1115_01720 PF01168 Alanine racemase, N-terminal domain D1115_01730 PF01894 Uncharacterised protein family UPF0047 D1115_01735 PF00342 Phosphoglucose isomerase D1115_01745 PF01475 Ferric uptake regulator family D1115_01750 PF01207 Dihydrouridine synthase (Dus) D1115_01770 PF00175 Oxidoreductase NAD-binding domain D1115_01770 PF00667 FAD binding domain D1115_01770 PF00258 Flavodoxin D1115_01775 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain D1115_01775 PF01077 Nitrite and sulphite reductase 4Fe-4S domain D1115_01780 PF01507 Phosphoadenosine phosphosulfate reductase family D1115_01835 PF13358 DDE superfamily endonuclease D1115_01845 PF13358 DDE superfamily endonuclease D1115_01850 PF00999 Sodium/hydrogen exchanger family D1115_01860 PF00696 Amino acid kinase family D1115_01860 PF01842 ACT domain D1115_01870 PF00266 Aminotransferase class-V D1115_01880 PF17755 UvrA DNA-binding domain D1115_01880 PF00005 ABC transporter D1115_01880 PF17760 UvrA interaction domain D1115_01890 PF00196 Bacterial regulatory proteins, luxR family D1115_01895 PF00436 Single-strand binding protein family D1115_01900 PF00990 Diguanylate cyclase, GGDEF domain D1115_01900 PF17157 Gammaproteobacterial periplasmic sensor domain D1115_01900 PF00563 EAL domain D1115_01920 PF03958 Bacterial type II/III secretion system short domain D1115_01920 PF00263 Bacterial type II and III secretion system protein D1115_01925 PF13401 AAA domain D1115_01925 PF01471 Putative peptidoglycan binding domain D1115_01935 PF00437 Type II/IV secretion system protein D1115_01950 PF08334 Type II secretion system (T2SS), protein G D1115_01950 PF07963 Prokaryotic N-terminal methylation motif D1115_02005 PF04085 rod shape-determining protein MreC D1115_02010 PF04093 rod shape-determining protein MreD D1115_02015 PF02545 Maf-like protein D1115_02020 PF00575 S1 RNA binding domain D1115_02020 PF10150 Ribonuclease E/G family D1115_02030 PF00795 Carbon-nitrogen hydrolase D1115_02035 PF01523 Putative modulator of DNA gyrase D1115_02040 PF02562 PhoH-like protein D1115_02040 PF13638 PIN domain D1115_02045 PF12137 RNA polymerase recycling family C-terminal D1115_02045 PF18339 RapA N-terminal Tudor like domain 1 D1115_02045 PF18337 RapA N-terminal Tudor like domain D1115_02045 PF00271 Helicase conserved C-terminal domain D1115_02045 PF00176 SNF2 family N-terminal domain D1115_02050 PF00849 RNA pseudouridylate synthase D1115_02055 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D1115_02055 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D1115_02060 PF04751 Protein of unknown function (DUF615) D1115_02065 PF01523 Putative modulator of DNA gyrase D1115_02070 PF01769 Divalent cation transporter D1115_02070 PF03448 MgtE intracellular N domain D1115_02070 PF00571 CBS domain D1115_02075 PF00381 PTS HPr component phosphorylation site D1115_02080 PF03668 P-loop ATPase protein family D1115_02085 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D1115_02090 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein D1115_02095 PF00309 Sigma-54 factor, Activator interacting domain (AID) D1115_02095 PF04963 Sigma-54 factor, core binding domain D1115_02095 PF04552 Sigma-54, DNA binding domain D1115_02100 PF12399 Branched-chain amino acid ATP-binding cassette transporter D1115_02100 PF00005 ABC transporter D1115_02105 PF03968 OstA-like protein D1115_02115 PF00571 CBS domain D1115_02115 PF01380 SIS domain D1115_02120 PF01699 Sodium/calcium exchanger protein D1115_02125 PF00005 ABC transporter D1115_02130 PF02405 Permease MlaE D1115_02135 PF02470 MlaD protein D1115_02140 PF05494 MlaC protein D1115_02150 PF01722 BolA-like protein D1115_02155 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) D1115_02160 PF01553 Acyltransferase D1115_02165 PF01042 Endoribonuclease L-PSP D1115_02170 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain D1115_02170 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain D1115_02175 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain D1115_02175 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain D1115_02185 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain D1115_02185 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain D1115_02195 PF06877 Regulator of ribonuclease activity B D1115_02205 PF00583 Acetyltransferase (GNAT) family D1115_02215 PF08264 Anticodon-binding domain of tRNA D1115_02215 PF10458 Valyl tRNA synthetase tRNA binding arm D1115_02215 PF00133 tRNA synthetases class I (I, L, M and V) D1115_02225 PF02789 Cytosol aminopeptidase family, N-terminal domain D1115_02225 PF00883 Cytosol aminopeptidase family, catalytic domain D1115_02230 PF03739 Lipopolysaccharide export system permease LptF/LptG D1115_02250 PF00589 Phage integrase family D1115_02285 PF02384 N-6 DNA Methylase D1115_02290 PF01420 Type I restriction modification DNA specificity domain D1115_02295 PF13784 Fic/DOC family N-terminal D1115_02295 PF02661 Fic/DOC family D1115_02305 PF11867 Domain of unknown function (DUF3387) D1115_02305 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) D1115_02305 PF18766 SWI2/SNF2 ATPase D1115_02325 PF00583 Acetyltransferase (GNAT) family D1115_02325 PF00795 Carbon-nitrogen hydrolase D1115_02330 PF00072 Response regulator receiver domain D1115_02370 PF00171 Aldehyde dehydrogenase family D1115_02400 PF00672 HAMP domain D1115_02400 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D1115_02400 PF17200 Single Cache domain 2 D1115_02445 PF04362 Bacterial Fe(2+) trafficking D1115_02450 PF14815 NUDIX domain D1115_02450 PF00730 HhH-GPD superfamily base excision DNA repair protein D1115_02450 PF00633 Helix-hairpin-helix motif D1115_02450 PF10576 Iron-sulfur binding domain of endonuclease III D1115_02455 PF02390 Putative methyltransferase D1115_02460 PF02086 D12 class N6 adenine-specific DNA methyltransferase D1115_02465 PF04960 Glutaminase D1115_02470 PF04055 Radical SAM superfamily D1115_02470 PF06969 HemN C-terminal domain D1115_02475 PF01725 Ham1 family D1115_02485 PF02594 Uncharacterised ACR, YggU family COG1872 D1115_02490 PF02325 YGGT family D1115_02495 PF14748 Pyrroline-5-carboxylate reductase dimerisation D1115_02495 PF03807 NADP oxidoreductase coenzyme F420-dependent D1115_02500 PF01168 Alanine racemase, N-terminal domain D1115_02505 PF00437 Type II/IV secretion system protein D1115_02510 PF00437 Type II/IV secretion system protein D1115_02515 PF03652 Holliday junction resolvase D1115_02520 PF02622 Uncharacterized ACR, COG1678 D1115_02525 PF02951 Prokaryotic glutathione synthetase, N-terminal domain D1115_02525 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain D1115_02530 PF04452 RNA methyltransferase D1115_02535 PF04231 Endonuclease I D1115_02540 PF17283 SprT-like zinc ribbon domain D1115_02540 PF10263 SprT-like family D1115_02550 PF02773 S-adenosylmethionine synthetase, C-terminal domain D1115_02550 PF02772 S-adenosylmethionine synthetase, central domain D1115_02550 PF00438 S-adenosylmethionine synthetase, N-terminal domain D1115_02555 PF00456 Transketolase, thiamine diphosphate binding domain D1115_02555 PF02779 Transketolase, pyrimidine binding domain D1115_02555 PF02780 Transketolase, C-terminal domain D1115_02560 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain D1115_02560 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain D1115_02565 PF00162 Phosphoglycerate kinase D1115_02570 PF01116 Fructose-bisphosphate aldolase class-II D1115_02580 PF05552 Conserved TM helix D1115_02580 PF00924 Mechanosensitive ion channel D1115_02590 PF01810 LysE type translocator D1115_02595 PF03466 LysR substrate binding domain D1115_02595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1115_02600 PF04402 Protein of unknown function (DUF541) D1115_02605 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D1115_02605 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D1115_02605 PF01842 ACT domain D1115_02610 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) D1115_02615 PF01812 5-formyltetrahydrofolate cyclo-ligase family D1115_02625 PF05164 Cell division protein ZapA D1115_02630 PF03695 Uncharacterised protein family (UPF0149) D1115_02635 PF01494 FAD binding domain D1115_02640 PF01494 FAD binding domain D1115_02660 PF03937 Flavinator of succinate dehydrogenase D1115_02670 PF00890 FAD binding domain D1115_02670 PF02910 Fumarate reductase flavoprotein C-term D1115_02675 PF04542 Sigma-70 region 2 D1115_02675 PF08281 Sigma-70, region 4 D1115_02680 PF03872 Anti sigma-E protein RseA, N-terminal domain D1115_02680 PF03873 Anti sigma-E protein RseA, C-terminal domain D1115_02685 PF17188 MucB/RseB C-terminal domain D1115_02685 PF03888 MucB/RseB N-terminal domain D1115_02695 PF06421 GTP-binding protein LepA C-terminus D1115_02695 PF00009 Elongation factor Tu GTP binding domain D1115_02695 PF03144 Elongation factor Tu domain 2 D1115_02695 PF00679 Elongation factor G C-terminus D1115_02700 PF10502 Signal peptidase, peptidase S26 D1115_02705 PF14622 Ribonuclease-III-like D1115_02705 PF00035 Double-stranded RNA binding motif D1115_02710 PF01926 50S ribosome-binding GTPase D1115_02710 PF07650 KH domain D1115_02715 PF02565 Recombination protein O C terminal D1115_02715 PF11967 Recombination protein O N terminal D1115_02720 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ D1115_02725 PF01648 4'-phosphopantetheinyl transferase superfamily D1115_02730 PF00672 HAMP domain D1115_02730 PF00512 His Kinase A (phospho-acceptor) domain D1115_02730 PF01627 Hpt domain D1115_02730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1115_02730 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) D1115_02730 PF00072 Response regulator receiver domain D1115_02745 PF04607 Region found in RelA / SpoT proteins D1115_02745 PF02824 TGS domain D1115_02745 PF13291 ACT domain D1115_02750 PF03819 MazG nucleotide pyrophosphohydrolase domain D1115_02755 PF00117 Glutamine amidotransferase class-I D1115_02755 PF06418 CTP synthase N-terminus D1115_02760 PF00113 Enolase, C-terminal TIM barrel domain D1115_02760 PF03952 Enolase, N-terminal domain D1115_02765 PF04977 Septum formation initiator D1115_02770 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase D1115_02775 PF02542 YgbB family D1115_02780 PF01142 tRNA pseudouridine synthase D (TruD) D1115_02785 PF01975 Survival protein SurE D1115_02795 PF01476 LysM domain D1115_02795 PF01551 Peptidase family M23 D1115_02800 PF04545 Sigma-70, region 4 D1115_02800 PF04539 Sigma-70 region 3 D1115_02800 PF04542 Sigma-70 region 2 D1115_02800 PF00140 Sigma-70 factor, region 1.2 D1115_02805 PF01624 MutS domain I D1115_02805 PF05188 MutS domain II D1115_02805 PF05192 MutS domain III D1115_02805 PF05190 MutS family domain IV D1115_02805 PF00488 MutS domain V D1115_02810 PF02464 Competence-damaged protein D1115_02815 PF00154 recA bacterial DNA recombination protein D1115_02820 PF02631 RecX family D1115_02825 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain D1115_02825 PF01411 tRNA synthetases class II (A) D1115_02825 PF02272 DHHA1 domain D1115_02830 PF00696 Amino acid kinase family D1115_02830 PF01842 ACT domain D1115_02830 PF13840 ACT domain D1115_02835 PF02599 Global regulator protein family D1115_02925 PF04277 Oxaloacetate decarboxylase, gamma chain D1115_02930 PF02436 Conserved carboxylase domain D1115_02930 PF00682 HMGL-like D1115_02930 PF00364 Biotin-requiring enzyme D1115_02935 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit D1115_02945 PF09335 SNARE associated Golgi protein D1115_02950 PF05193 Peptidase M16 inactive domain D1115_02950 PF00675 Insulinase (Peptidase family M16) D1115_02965 PF02664 S-Ribosylhomocysteinase (LuxS) D1115_02970 PF03471 Transporter associated domain D1115_02970 PF00571 CBS domain D1115_02970 PF01595 Cyclin M transmembrane N-terminal domain D1115_02975 PF01578 Cytochrome C assembly protein D1115_02980 PF02978 Signal peptide binding domain D1115_02980 PF02881 SRP54-type protein, helical bundle domain D1115_02980 PF00448 SRP54-type protein, GTPase domain D1115_02985 PF00886 Ribosomal protein S16 D1115_02990 PF05239 PRC-barrel domain D1115_02990 PF01782 RimM N-terminal domain D1115_02995 PF01746 tRNA (Guanine-1)-methyltransferase D1115_03000 PF01245 Ribosomal protein L19 D1115_03005 PF03884 DNA gyrase inhibitor YacG D1115_03010 PF07072 Cell division protein D1115_03015 PF01121 Dephospho-CoA kinase D1115_03020 PF01478 Type IV leader peptidase family D1115_03020 PF06750 Bacterial Peptidase A24 N-terminal domain D1115_03025 PF00482 Type II secretion system (T2SS), protein F D1115_03030 PF00437 Type II/IV secretion system protein D1115_03030 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain D1115_03035 PF00114 Pilin (bacterial filament) D1115_03035 PF07963 Prokaryotic N-terminal methylation motif D1115_03040 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain D1115_03040 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain D1115_03045 PF01510 N-acetylmuramoyl-L-alanine amidase D1115_03050 PF00392 Bacterial regulatory proteins, gntR family D1115_03050 PF07729 FCD domain D1115_03055 PF17831 Pyruvate dehydrogenase E1 component middle domain D1115_03055 PF00456 Transketolase, thiamine diphosphate binding domain D1115_03060 PF02817 e3 binding domain D1115_03060 PF00364 Biotin-requiring enzyme D1115_03060 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) D1115_03065 PF07992 Pyridine nucleotide-disulphide oxidoreductase D1115_03065 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D1115_03070 PF00440 Bacterial regulatory proteins, tetR family D1115_03075 PF00156 Phosphoribosyl transferase domain D1115_03080 PF00484 Carbonic anhydrase D1115_03085 PF01740 STAS domain D1115_03085 PF00916 Sulfate permease family D1115_03090 PF00005 ABC transporter D1115_03095 PF01061 ABC-2 type transporter D1115_03100 PF02569 Pantoate-beta-alanine ligase D1115_03105 PF02548 Ketopantoate hydroxymethyltransferase D1115_03110 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) D1115_03115 PF12626 Polymerase A arginine-rich C-terminus D1115_03115 PF01743 Poly A polymerase head domain D1115_03115 PF12627 Probable RNA and SrmB- binding site of polymerase A D1115_03120 PF00749 tRNA synthetases class I (E and Q), catalytic domain D1115_03125 PF01258 Prokaryotic dksA/traR C4-type zinc finger D1115_03130 PF03749 Sugar fermentation stimulation protein RE domain D1115_03130 PF17746 SfsA N-terminal OB domain D1115_03135 PF00271 Helicase conserved C-terminal domain D1115_03135 PF00270 DEAD/DEAH box helicase D1115_03135 PF04408 Helicase associated domain (HA2) D1115_03135 PF08482 ATP-dependent helicase C-terminal D1115_03140 PF00912 Transglycosylase D1115_03140 PF00905 Penicillin binding protein transpeptidase domain D1115_03140 PF14814 Bifunctional transglycosylase second domain D1115_03145 PF01734 Patatin-like phospholipase D1115_03150 PF11791 Aconitate B N-terminal domain D1115_03150 PF00330 Aconitase family (aconitate hydratase) D1115_03150 PF06434 Aconitate hydratase 2 N-terminus D1115_03155 PF02595 Glycerate kinase family D1115_03160 PF02447 GntP family permease D1115_03165 PF05651 Putative sugar diacid recognition D1115_03165 PF17853 GGDEF-like domain D1115_03165 PF13556 PucR C-terminal helix-turn-helix domain D1115_03170 PF06062 Uncharacterised protein family (UPF0231) D1115_03175 PF00543 Nitrogen regulatory protein P-II D1115_03180 PF00909 Ammonium Transporter Family D1115_03185 PF13416 Bacterial extracellular solute-binding protein D1115_03195 PF00005 ABC transporter D1115_03195 PF08402 TOBE domain D1115_03200 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain D1115_03200 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III D1115_03200 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I D1115_03200 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II D1115_03205 PF06165 Glycosyltransferase family 36 D1115_03205 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain D1115_03210 PF00728 Glycosyl hydrolase family 20, catalytic domain D1115_03210 PF02838 Glycosyl hydrolase family 20, domain 2 D1115_03215 PF01869 BadF/BadG/BcrA/BcrD ATPase family D1115_03225 PF00005 ABC transporter D1115_03225 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D1115_03230 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D1115_03230 PF00005 ABC transporter D1115_03240 PF00528 Binding-protein-dependent transport system inner membrane component D1115_03245 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D1115_03260 PF05175 Methyltransferase small domain D1115_03260 PF08468 Methyltransferase small domain N-terminal D1115_03270 PF00202 Aminotransferase class-III D1115_03275 PF01521 Iron-sulphur cluster biosynthesis D1115_03280 PF13533 Biotin-lipoyl like D1115_03290 PF08525 Opacity-associated protein A N-terminal motif D1115_03290 PF01476 LysM domain D1115_03290 PF01551 Peptidase family M23 D1115_03295 PF00579 tRNA synthetases class I (W and Y) D1115_03310 PF13609 Gram-negative porin D1115_03315 PF01272 Transcription elongation factor, GreA/GreB, C-term D1115_03315 PF03449 Transcription elongation factor, N-terminal D1115_03320 PF01985 CRS1 / YhbY (CRM) domain D1115_03325 PF01728 FtsJ-like methyltransferase D1115_03330 PF01434 Peptidase family M41 D1115_03330 PF00004 ATPase family associated with various cellular activities (AAA) D1115_03330 PF17862 AAA+ lid domain D1115_03330 PF06480 FtsH Extracellular D1115_03335 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III D1115_03335 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I D1115_03335 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II D1115_03335 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain D1115_03340 PF03840 Preprotein translocase SecG subunit D1115_03355 PF17384 RimP C-terminal SH3 domain D1115_03355 PF02576 RimP N-terminal domain D1115_03360 PF00575 S1 RNA binding domain D1115_03360 PF13184 NusA-like KH domain D1115_03360 PF08529 NusA N-terminal domain D1115_03370 PF02033 Ribosome-binding factor A D1115_03375 PF01509 TruB family pseudouridylate synthase (N terminal domain) D1115_03375 PF09157 Pseudouridine synthase II TruB, C-terminal D1115_03375 PF16198 tRNA pseudouridylate synthase B C-terminal domain D1115_03380 PF00312 Ribosomal protein S15 D1115_03385 PF01138 3' exoribonuclease family, domain 1 D1115_03385 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain D1115_03385 PF03725 3' exoribonuclease family, domain 2 D1115_03385 PF00575 S1 RNA binding domain D1115_03385 PF00013 KH domain D1115_03390 PF13181 Tetratricopeptide repeat D1115_03390 PF07719 Tetratricopeptide repeat D1115_03395 PF01047 MarR family D1115_03400 PF01554 MatE D1115_03425 PF13508 Acetyltransferase (GNAT) domain D1115_03450 PF01026 TatD related DNase D1115_03455 PF01773 Na+ dependent nucleoside transporter N-terminus D1115_03455 PF07670 Nucleoside recognition D1115_03455 PF07662 Na+ dependent nucleoside transporter C-terminus D1115_03460 PF01791 DeoC/LacD family aldolase D1115_03465 PF02885 Glycosyl transferase family, helical bundle domain D1115_03465 PF00591 Glycosyl transferase family, a/b domain D1115_03465 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain D1115_03470 PF01676 Metalloenzyme superfamily D1115_03475 PF01048 Phosphorylase superfamily D1115_03495 PF18073 Rubredoxin metal binding domain D1115_03500 PF00679 Elongation factor G C-terminus D1115_03500 PF14492 Elongation Factor G, domain II D1115_03500 PF03764 Elongation factor G, domain IV D1115_03500 PF00009 Elongation factor Tu GTP binding domain D1115_03500 PF03144 Elongation factor Tu domain 2 D1115_03505 PF00501 AMP-binding enzyme D1115_03515 PF03466 LysR substrate binding domain D1115_03515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1115_03520 PF00356 Bacterial regulatory proteins, lacI family D1115_03525 PF16363 GDP-mannose 4,6 dehydratase D1115_03530 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain D1115_03530 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain D1115_03535 PF10509 Galactokinase galactose-binding signature D1115_03535 PF08544 GHMP kinases C terminal D1115_03535 PF00288 GHMP kinases N terminal domain D1115_03540 PF01263 Aldose 1-epimerase D1115_03545 PF00356 Bacterial regulatory proteins, lacI family D1115_03560 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain D1115_03560 PF01464 Transglycosylase SLT domain D1115_03565 PF01266 FAD dependent oxidoreductase D1115_03565 PF16901 C-terminal domain of alpha-glycerophosphate oxidase D1115_03570 PF02782 FGGY family of carbohydrate kinases, C-terminal domain D1115_03570 PF00370 FGGY family of carbohydrate kinases, N-terminal domain D1115_03580 PF14602 Hexapeptide repeat of succinyl-transferase D1115_03580 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle D1115_03595 PF07130 YebG protein D1115_03600 PF03466 LysR substrate binding domain D1115_03600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1115_03610 PF17946 RecC C-terminal domain D1115_03615 PF12705 PD-(D/E)XK nuclease superfamily D1115_03615 PF13361 UvrD-like helicase C-terminal domain D1115_03615 PF00580 UvrD/REP helicase N-terminal domain D1115_03620 PF13538 UvrD-like helicase C-terminal domain D1115_03700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1115_03700 PF00072 Response regulator receiver domain D1115_03700 PF09456 RcsC Alpha-Beta-Loop (ABL) D1115_03700 PF00512 His Kinase A (phospho-acceptor) domain D1115_03705 PF00072 Response regulator receiver domain D1115_03705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1115_03705 PF09456 RcsC Alpha-Beta-Loop (ABL) D1115_03705 PF00512 His Kinase A (phospho-acceptor) domain D1115_03715 PF02954 Bacterial regulatory protein, Fis family D1115_03715 PF00158 Sigma-54 interaction domain D1115_03715 PF00072 Response regulator receiver domain D1115_03720 PF00990 Diguanylate cyclase, GGDEF domain D1115_03720 PF08448 PAS fold D1115_03720 PF00563 EAL domain D1115_03795 PF00899 ThiF family D1115_03800 PF02657 Fe-S metabolism associated domain D1115_03805 PF00266 Aminotransferase class-V D1115_03810 PF01965 DJ-1/PfpI family D1115_03815 PF02558 Ketopantoate reductase PanE/ApbA D1115_03815 PF08546 Ketopantoate reductase PanE/ApbA C terminal D1115_03820 PF03502 Nucleoside-specific channel-forming protein, Tsx D1115_03840 PF04545 Sigma-70, region 4 D1115_03840 PF04542 Sigma-70 region 2 D1115_03855 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD D1115_03865 PF05175 Methyltransferase small domain D1115_03870 PF01722 BolA-like protein D1115_03875 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) D1115_03875 PF11973 NQRA C-terminal domain D1115_03880 PF03116 NQR2, RnfD, RnfE family D1115_03885 PF04205 FMN-binding domain D1115_03890 PF02508 Rnf-Nqr subunit, membrane protein D1115_03895 PF02508 Rnf-Nqr subunit, membrane protein D1115_03900 PF00111 2Fe-2S iron-sulfur cluster binding domain D1115_03900 PF00175 Oxidoreductase NAD-binding domain D1115_03900 PF00970 Oxidoreductase FAD-binding domain D1115_03905 PF02424 ApbE family D1115_03920 PF11799 impB/mucB/samB family C-terminal domain D1115_03920 PF00817 impB/mucB/samB family D1115_03920 PF11798 IMS family HHH motif D1115_03925 PF00570 HRDC domain D1115_03925 PF00270 DEAD/DEAH box helicase D1115_03925 PF00271 Helicase conserved C-terminal domain D1115_03925 PF09382 RQC domain D1115_03925 PF16124 RecQ zinc-binding D1115_03930 PF01272 Transcription elongation factor, GreA/GreB, C-term D1115_03930 PF03449 Transcription elongation factor, N-terminal D1115_03940 PF00209 Sodium:neurotransmitter symporter family D1115_03950 PF06786 Uncharacterised protein family (UPF0253) D1115_03960 PF03129 Anticodon binding domain D1115_03960 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) D1115_03960 PF04073 Aminoacyl-tRNA editing domain D1115_03965 PF18389 TrmO C-terminal domain D1115_03965 PF01980 tRNA-methyltransferase O D1115_03970 PF03806 AbgT putative transporter family D1115_03975 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 D1115_04000 PF04287 tRNA pseudouridine synthase C D1115_04005 PF00849 RNA pseudouridylate synthase D1115_04010 PF11944 Protein of unknown function (DUF3461) D1115_04015 PF01966 HD domain D1115_04015 PF01909 Nucleotidyltransferase domain D1115_04015 PF01842 ACT domain D1115_04015 PF08335 GlnD PII-uridylyltransferase D1115_04020 PF00557 Metallopeptidase family M24 D1115_04025 PF00318 Ribosomal protein S2 D1115_04030 PF00889 Elongation factor TS D1115_04035 PF00696 Amino acid kinase family D1115_04040 PF01765 Ribosome recycling factor D1115_04045 PF01255 Putative undecaprenyl diphosphate synthase D1115_04055 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain D1115_04055 PF13288 DXP reductoisomerase C-terminal domain D1115_04055 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase D1115_04060 PF17820 PDZ domain D1115_04060 PF02163 Peptidase family M50 D1115_04065 PF01103 Surface antigen D1115_04065 PF07244 Surface antigen variable number repeat D1115_04070 PF03938 Outer membrane protein (OmpH-like) D1115_04075 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD D1115_04075 PF00132 Bacterial transferase hexapeptide (six repeats) D1115_04080 PF07977 FabA-like domain D1115_04085 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 D1115_04085 PF00132 Bacterial transferase hexapeptide (six repeats) D1115_04090 PF02684 Lipid-A-disaccharide synthetase D1115_04095 PF01351 Ribonuclease HII D1115_04100 PF17657 Bacterial DNA polymerase III alpha subunit finger domain D1115_04100 PF01336 OB-fold nucleic acid binding domain D1115_04100 PF07733 Bacterial DNA polymerase III alpha NTPase domain D1115_04100 PF14579 Helix-hairpin-helix motif D1115_04100 PF02811 PHP domain D1115_04105 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit D1115_04110 PF11734 TilS substrate C-terminal domain D1115_04110 PF01171 PP-loop family D1115_04110 PF09179 TilS substrate binding domain D1115_04115 PF00034 Cytochrome c D1115_04120 PF00543 Nitrogen regulatory protein P-II D1115_04135 PF01464 Transglycosylase SLT domain D1115_04135 PF01476 LysM domain D1115_04145 PF08241 Methyltransferase domain D1115_04150 PF00075 RNase H D1115_04155 PF00929 Exonuclease D1115_04170 PF09317 Domain of unknown function (DUF1974) D1115_04170 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D1115_04170 PF02770 Acyl-CoA dehydrogenase, middle domain D1115_04170 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D1115_04175 PF13580 SIS domain D1115_04180 PF13230 Glutamine amidotransferases class-II D1115_04185 PF00551 Formyl transferase D1115_04190 PF02769 AIR synthase related protein, C-terminal domain D1115_04190 PF00586 AIR synthase related protein, N-terminal domain D1115_04200 PF00860 Permease family D1115_04215 PF03358 NADPH-dependent FMN reductase D1115_04220 PF03960 ArsC family D1115_04225 PF01435 Peptidase family M48 D1115_04225 PF13181 Tetratricopeptide repeat D1115_04235 PF01594 AI-2E family transporter D1115_04240 PF00578 AhpC/TSA family D1115_04245 PF01842 ACT domain D1115_04250 PF00701 Dihydrodipicolinate synthetase family D1115_04270 PF01546 Peptidase family M20/M25/M40 D1115_04270 PF07687 Peptidase dimerisation domain D1115_04275 PF03960 ArsC family D1115_04295 PF11143 Protein of unknown function (DUF2919) D1115_04300 PF04261 Dyp-type peroxidase family D1115_04315 PF00700 Bacterial flagellin C-terminal helical region D1115_04315 PF07196 Flagellin hook IN motif D1115_04315 PF00669 Bacterial flagellin N-terminal helical region D1115_04320 PF00669 Bacterial flagellin N-terminal helical region D1115_04320 PF07196 Flagellin hook IN motif D1115_04320 PF00700 Bacterial flagellin C-terminal helical region D1115_04325 PF03646 FlaG protein D1115_04330 PF02465 Flagellar hook-associated protein 2 N-terminus D1115_04330 PF07195 Flagellar hook-associated protein 2 C-terminus D1115_04330 PF07196 Flagellin hook IN motif D1115_04340 PF02561 Flagellar protein FliS D1115_04350 PF00158 Sigma-54 interaction domain D1115_04350 PF01590 GAF domain D1115_04350 PF02954 Bacterial regulatory protein, Fis family D1115_04355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1115_04355 PF00512 His Kinase A (phospho-acceptor) domain D1115_04360 PF02954 Bacterial regulatory protein, Fis family D1115_04360 PF00072 Response regulator receiver domain D1115_04360 PF00158 Sigma-54 interaction domain D1115_04365 PF02049 Flagellar hook-basal body complex protein FliE D1115_04375 PF01706 FliG C-terminal domain D1115_04375 PF14842 FliG N-terminal domain D1115_04375 PF14841 FliG middle domain D1115_04385 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D1115_04385 PF18269 T3SS EscN ATPase C-terminal domain D1115_04410 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term D1115_04415 PF00813 FliP family D1115_04420 PF01313 Bacterial export proteins, family 3 D1115_04425 PF01311 Bacterial export proteins, family 1 D1115_04430 PF01312 FlhB HrpN YscU SpaS Family D1115_04440 PF00448 SRP54-type protein, GTPase domain D1115_04445 PF10609 NUBPL iron-transfer P-loop NTPase D1115_04450 PF04542 Sigma-70 region 2 D1115_04450 PF04539 Sigma-70 region 3 D1115_04450 PF04545 Sigma-70, region 4 D1115_04455 PF00072 Response regulator receiver domain D1115_04460 PF04344 Chemotaxis phosphatase, CheZ D1115_04465 PF07194 P2 response regulator binding domain D1115_04465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1115_04465 PF02895 Signal transducing histidine kinase, homodimeric domain D1115_04465 PF01584 CheW-like domain D1115_04465 PF01627 Hpt domain D1115_04470 PF01339 CheB methylesterase D1115_04470 PF00072 Response regulator receiver domain D1115_04475 PF13614 AAA domain D1115_04485 PF01584 CheW-like domain D1115_04495 PF00005 ABC transporter D1115_04500 PF03379 CcmB protein D1115_04515 PF03100 CcmE D1115_04520 PF01578 Cytochrome C assembly protein D1115_04520 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal D1115_04525 PF08534 Redoxin D1115_04530 PF03918 Cytochrome C biogenesis protein D1115_04535 PF03918 Cytochrome C biogenesis protein D1115_04540 PF04333 MlaA lipoprotein D1115_04545 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) D1115_04550 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) D1115_04560 PF08281 Sigma-70, region 4 D1115_04560 PF04542 Sigma-70 region 2 D1115_04575 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain D1115_04575 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain D1115_04575 PF00378 Enoyl-CoA hydratase/isomerase D1115_04585 PF00675 Insulinase (Peptidase family M16) D1115_04585 PF05193 Peptidase M16 inactive domain D1115_04585 PF16187 Middle or third domain of peptidase_M16 D1115_04590 PF00300 Histidine phosphatase superfamily (branch 1) D1115_04600 PF05175 Methyltransferase small domain D1115_04605 PF01264 Chorismate synthase D1115_04610 PF03458 UPF0126 domain D1115_04615 PF04315 Elongation factor P hydroxylase D1115_04620 PF08891 YfcL protein D1115_04625 PF03358 NADPH-dependent FMN reductase D1115_04630 PF01266 FAD dependent oxidoreductase D1115_04630 PF05430 S-adenosyl-L-methionine-dependent methyltransferase D1115_04635 PF00109 Beta-ketoacyl synthase, N-terminal domain D1115_04635 PF02801 Beta-ketoacyl synthase, C-terminal domain D1115_04645 PF03466 LysR substrate binding domain D1115_04645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1115_04650 PF07715 TonB-dependent Receptor Plug Domain D1115_04650 PF00593 TonB dependent receptor D1115_04660 PF02264 LamB porin D1115_04660 PF11471 Maltoporin periplasmic N-terminal extension D1115_04665 PF00356 Bacterial regulatory proteins, lacI family D1115_04670 PF00367 phosphotransferase system, EIIB D1115_04670 PF02378 Phosphotransferase system, EIIC D1115_04675 PF00294 pfkB family carbohydrate kinase D1115_04680 PF00251 Glycosyl hydrolases family 32 N-terminal domain D1115_04680 PF08244 Glycosyl hydrolases family 32 C terminal D1115_04685 PF11890 Domain of unknown function (DUF3410) D1115_04685 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D1115_04685 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D1115_04690 PF02774 Semialdehyde dehydrogenase, dimerisation domain D1115_04690 PF01118 Semialdehyde dehydrogenase, NAD binding domain D1115_04700 PF01416 tRNA pseudouridine synthase D1115_04705 PF17848 Acetyl-coA carboxylase zinc finger domain D1115_04705 PF01039 Carboxyl transferase domain D1115_04710 PF02875 Mur ligase family, glutamate ligase domain D1115_04710 PF08245 Mur ligase middle domain D1115_04720 PF02674 Colicin V production protein D1115_04725 PF00156 Phosphoribosyl transferase domain D1115_04730 PF03466 LysR substrate binding domain D1115_04730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1115_04735 PF00072 Response regulator receiver domain D1115_04740 PF04304 Protein of unknown function (DUF454) D1115_04745 PF00156 Phosphoribosyl transferase domain D1115_04750 PF12170 DNA polymerase III tau subunit V interacting with alpha D1115_04750 PF12169 DNA polymerase III subunits gamma and tau domain III D1115_04755 PF02575 YbaB/EbfC DNA-binding family D1115_04760 PF13662 Toprim domain D1115_04760 PF02132 RecR protein D1115_04765 PF00230 Major intrinsic protein D1115_04770 PF03692 Putative zinc- or iron-chelating domain D1115_04775 PF03692 Putative zinc- or iron-chelating domain D1115_04780 PF04226 Transglycosylase associated protein D1115_04785 PF06826 Predicted Permease Membrane Region D1115_04790 PF00282 Pyridoxal-dependent decarboxylase conserved domain D1115_04795 PF00924 Mechanosensitive ion channel D1115_04795 PF05552 Conserved TM helix D1115_04805 PF00291 Pyridoxal-phosphate dependent enzyme D1115_04810 PF13404 AsnC-type helix-turn-helix domain D1115_04810 PF01037 Lrp/AsnC ligand binding domain D1115_04820 PF09619 Type III secretion system lipoprotein chaperone (YscW) D1115_04825 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain D1115_04835 PF05230 MASE2 domain D1115_04835 PF00990 Diguanylate cyclase, GGDEF domain D1115_04845 PF00588 SpoU rRNA Methylase family D1115_04845 PF08032 RNA 2'-O ribose methyltransferase substrate binding D1115_04850 PF00037 4Fe-4S binding domain D1115_04850 PF11953 Domain of unknown function (DUF3470) D1115_04865 PF00478 IMP dehydrogenase / GMP reductase domain D1115_04865 PF00571 CBS domain D1115_04870 PF01554 MatE D1115_04875 PF00403 Heavy-metal-associated domain D1115_04880 PF01048 Phosphorylase superfamily D1115_04890 PF00672 HAMP domain D1115_04890 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D1115_04895 PF01230 HIT domain D1115_04910 PF13036 Peptidoglycan-synthase activator LpoB D1115_04910 PF08139 Prokaryotic membrane lipoprotein lipid attachment site D1115_04915 PF01636 Phosphotransferase enzyme family D1115_04920 PF05728 Uncharacterised protein family (UPF0227) D1115_04925 PF07992 Pyridine nucleotide-disulphide oxidoreductase D1115_04940 PF03461 TRCF domain D1115_04940 PF17757 UvrB interaction domain D1115_04940 PF00271 Helicase conserved C-terminal domain D1115_04940 PF00270 DEAD/DEAH box helicase D1115_04940 PF02559 CarD-like/TRCF domain D1115_04950 PF02687 FtsX-like permease family D1115_04950 PF12704 MacB-like periplasmic core domain D1115_04955 PF00005 ABC transporter D1115_04960 PF12704 MacB-like periplasmic core domain D1115_04960 PF02687 FtsX-like permease family D1115_04970 PF00753 Metallo-beta-lactamase superfamily D1115_04970 PF03772 Competence protein D1115_04975 PF00664 ABC transporter transmembrane region D1115_04975 PF00005 ABC transporter D1115_04980 PF02606 Tetraacyldisaccharide-1-P 4'-kinase D1115_04985 PF03966 Trm112p-like protein D1115_04990 PF02348 Cytidylyltransferase D1115_04995 PF04293 SpoVR like protein D1115_05005 PF06798 PrkA serine protein kinase C-terminal domain D1115_05005 PF08298 PrkA AAA domain D1115_05010 PF03887 YfbU domain D1115_05020 PF04055 Radical SAM superfamily D1115_05030 PF01228 Glycine radical D1115_05030 PF02901 Pyruvate formate lyase-like D1115_05045 PF00005 ABC transporter D1115_05050 PF00497 Bacterial extracellular solute-binding proteins, family 3 D1115_05055 PF00528 Binding-protein-dependent transport system inner membrane component D1115_05060 PF00528 Binding-protein-dependent transport system inner membrane component D1115_05065 PF03372 Endonuclease/Exonuclease/phosphatase family D1115_05070 PF07445 Primosomal replication protein priC D1115_05075 PF01925 Sulfite exporter TauE/SafE D1115_05080 PF06733 DEAD_2 D1115_05080 PF13307 Helicase C-terminal domain D1115_05090 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) D1115_05095 PF00849 RNA pseudouridylate synthase D1115_05100 PF03971 Monomeric isocitrate dehydrogenase D1115_05105 PF00313 'Cold-shock' DNA-binding domain D1115_05110 PF02617 ATP-dependent Clp protease adaptor protein ClpS D1115_05115 PF17871 AAA lid domain D1115_05115 PF10431 C-terminal, D2-small domain, of ClpB protein D1115_05115 PF02861 Clp amino terminal domain, pathogenicity island component D1115_05115 PF00004 ATPase family associated with various cellular activities (AAA) D1115_05115 PF07724 AAA domain (Cdc48 subfamily) D1115_05120 PF01176 Translation initiation factor 1A / IF-1 D1115_05125 PF04377 Arginine-tRNA-protein transferase, C terminus D1115_05125 PF04376 Arginine-tRNA-protein transferase, N terminus D1115_05140 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) D1115_05145 PF10692 Protein of unknown function (DUF2498) D1115_05150 PF01131 DNA topoisomerase D1115_05150 PF01751 Toprim domain D1115_05150 PF08272 Topoisomerase I zinc-ribbon-like D1115_05150 PF01396 Topoisomerase DNA binding C4 zinc finger D1115_05160 PF00483 Nucleotidyl transferase D1115_05165 PF08323 Starch synthase catalytic domain D1115_05165 PF00534 Glycosyl transferases group 1 D1115_05185 PF04994 TfoX C-terminal domain D1115_05185 PF04993 TfoX N-terminal domain D1115_05190 PF00356 Bacterial regulatory proteins, lacI family D1115_05195 PF02613 Nitrate reductase delta subunit D1115_05200 PF00072 Response regulator receiver domain D1115_05200 PF00486 Transcriptional regulatory protein, C terminal D1115_05205 PF02698 DUF218 domain D1115_05215 PF03882 MukF winged-helix domain D1115_05215 PF17193 MukF C-terminal domain D1115_05215 PF17192 MukF middle domain D1115_05220 PF04288 MukE-like family D1115_05225 PF04310 MukB N-terminal D1115_05225 PF16330 MukB hinge domain D1115_05250 PF08003 Protein of unknown function (DUF1698) D1115_05255 PF13649 Methyltransferase domain D1115_05260 PF01904 Protein of unknown function DUF72 D1115_05265 PF01336 OB-fold nucleic acid binding domain D1115_05265 PF02938 GAD domain D1115_05265 PF00152 tRNA synthetases class II (D, K and N) D1115_05270 PF02075 Crossover junction endodeoxyribonuclease RuvC D1115_05275 PF01330 RuvA N terminal domain D1115_05275 PF07499 RuvA, C-terminal domain D1115_05280 PF05491 RuvB C-terminal winged helix domain D1115_05280 PF05496 Holliday junction DNA helicase RuvB P-loop domain D1115_05280 PF17864 RuvB AAA lid domain D1115_05285 PF01654 Cytochrome bd terminal oxidase subunit I D1115_05290 PF02322 Cytochrome bd terminal oxidase subunit II D1115_05295 PF08173 Membrane bound YbgT-like protein D1115_05305 PF03061 Thioesterase superfamily D1115_05310 PF01618 MotA/TolQ/ExbB proton channel family D1115_05315 PF02472 Biopolymer transport protein ExbD/TolR D1115_05325 PF07676 WD40-like Beta Propeller Repeat D1115_05325 PF04052 TolB amino-terminal domain D1115_05330 PF00691 OmpA family D1115_05335 PF13174 Tetratricopeptide repeat D1115_05335 PF16331 TolA binding protein trimerisation D1115_05340 PF02445 Quinolinate synthetase A protein D1115_05355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1115_05355 PF00512 His Kinase A (phospho-acceptor) domain D1115_05355 PF09308 LuxQ, periplasmic D1115_05355 PF00072 Response regulator receiver domain D1115_05370 PF00665 Integrase core domain D1115_05375 PF01695 IstB-like ATP binding protein D1115_05410 PF00529 HlyD membrane-fusion protein of T1SS D1115_05410 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D1115_05435 PF00474 Sodium:solute symporter family D1115_05455 PF00929 Exonuclease D1115_05455 PF07733 Bacterial DNA polymerase III alpha NTPase domain D1115_05455 PF17657 Bacterial DNA polymerase III alpha subunit finger domain D1115_05455 PF14579 Helix-hairpin-helix motif D1115_05455 PF02811 PHP domain D1115_05460 PF00571 CBS domain D1115_05465 PF07729 FCD domain D1115_05465 PF00392 Bacterial regulatory proteins, gntR family D1115_05470 PF07729 FCD domain D1115_05470 PF00392 Bacterial regulatory proteins, gntR family D1115_05475 PF01554 MatE D1115_05480 PF04074 YhcH/YjgK/YiaL D1115_05485 PF07940 Heparinase II/III-like protein D1115_05485 PF05426 Alginate lyase D1115_05490 PF05426 Alginate lyase D1115_05490 PF07940 Heparinase II/III-like protein D1115_05495 PF07883 Cupin domain D1115_05500 PF00294 pfkB family carbohydrate kinase D1115_05505 PF01081 KDPG and KHG aldolase D1115_05520 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D1115_05520 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase D1115_05525 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) D1115_05535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1115_05535 PF03466 LysR substrate binding domain D1115_05545 PF01262 Alanine dehydrogenase/PNT, C-terminal domain D1115_05545 PF05222 Alanine dehydrogenase/PNT, N-terminal domain D1115_05550 PF01037 Lrp/AsnC ligand binding domain D1115_05560 PF03548 Outer membrane lipoprotein carrier protein LolA D1115_05565 PF00004 ATPase family associated with various cellular activities (AAA) D1115_05565 PF16193 AAA C-terminal domain D1115_05565 PF12002 MgsA AAA+ ATPase C terminal D1115_05570 PF02403 Seryl-tRNA synthetase N-terminal domain D1115_05570 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) D1115_05575 PF01258 Prokaryotic dksA/traR C4-type zinc finger D1115_05580 PF00202 Aminotransferase class-III D1115_05585 PF06968 Biotin and Thiamin Synthesis associated domain D1115_05585 PF04055 Radical SAM superfamily D1115_05595 PF08241 Methyltransferase domain D1115_05610 PF01435 Peptidase family M48 D1115_05645 PF16036 Chalcone isomerase-like D1115_05655 PF00206 Lyase D1115_05655 PF08328 Adenylosuccinate lyase C-terminal D1115_05660 PF04356 Protein of unknown function (DUF489) D1115_05675 PF00294 pfkB family carbohydrate kinase D1115_05685 PF03553 Na+/H+ antiporter family D1115_05690 PF08029 HisG, C-terminal domain D1115_05690 PF01634 ATP phosphoribosyltransferase D1115_05695 PF00815 Histidinol dehydrogenase D1115_05705 PF08645 Polynucleotide kinase 3 phosphatase D1115_05705 PF00475 Imidazoleglycerol-phosphate dehydratase D1115_05710 PF00117 Glutamine amidotransferase class-I D1115_05715 PF00977 Histidine biosynthesis protein D1115_05720 PF00977 Histidine biosynthesis protein D1115_05725 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase D1115_05725 PF01502 Phosphoribosyl-AMP cyclohydrolase D1115_05735 PF02810 SEC-C motif D1115_05745 PF00149 Calcineurin-like phosphoesterase D1115_05750 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD D1115_05755 PF01406 tRNA synthetases class I (C) catalytic domain D1115_05755 PF09190 DALR domain D1115_05760 PF00265 Thymidine kinase D1115_05765 PF02698 DUF218 domain D1115_05790 PF01226 Formate/nitrite transporter D1115_05795 PF03649 Uncharacterised protein family (UPF0014) D1115_05800 PF06796 Periplasmic nitrate reductase protein NapE D1115_05805 PF03264 NapC/NirT cytochrome c family, N-terminal region D1115_05810 PF01568 Molydopterin dinucleotide binding domain D1115_05810 PF00384 Molybdopterin oxidoreductase D1115_05810 PF18364 Molybdopterin oxidoreductase N-terminal domain D1115_05825 PF01368 DHH family D1115_05825 PF02833 DHHA2 domain D1115_05835 PF00005 ABC transporter D1115_05840 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D1115_05840 PF00005 ABC transporter D1115_05845 PF12911 N-terminal TM domain of oligopeptide transport permease C D1115_05845 PF00528 Binding-protein-dependent transport system inner membrane component D1115_05850 PF00528 Binding-protein-dependent transport system inner membrane component D1115_05855 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D1115_05860 PF00158 Sigma-54 interaction domain D1115_05860 PF02954 Bacterial regulatory protein, Fis family D1115_05865 PF04012 PspA/IM30 family D1115_05870 PF06667 Phage shock protein B D1115_05880 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D1115_05885 PF13533 Biotin-lipoyl like D1115_05895 PF03352 Methyladenine glycosylase D1115_05900 PF01053 Cys/Met metabolism PLP-dependent enzyme D1115_05905 PF13091 PLD-like domain D1115_05905 PF13396 Phospholipase_D-nuclease N-terminal D1115_05910 PF00209 Sodium:neurotransmitter symporter family D1115_05915 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D1115_05915 PF00672 HAMP domain D1115_05915 PF12729 Four helix bundle sensory module for signal transduction D1115_05920 PF00849 RNA pseudouridylate synthase D1115_05930 PF00970 Oxidoreductase FAD-binding domain D1115_05930 PF00175 Oxidoreductase NAD-binding domain D1115_05930 PF00111 2Fe-2S iron-sulfur cluster binding domain D1115_05935 PF03063 Prismane/CO dehydrogenase family D1115_05940 PF01590 GAF domain D1115_05940 PF00158 Sigma-54 interaction domain D1115_05950 PF01066 CDP-alcohol phosphatidyltransferase D1115_05955 PF00005 ABC transporter D1115_05960 PF00528 Binding-protein-dependent transport system inner membrane component D1115_05965 PF13416 Bacterial extracellular solute-binding protein D1115_05970 PF09335 SNARE associated Golgi protein D1115_05980 PF07992 Pyridine nucleotide-disulphide oxidoreductase D1115_05980 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster D1115_05995 PF00196 Bacterial regulatory proteins, luxR family D1115_05995 PF00072 Response regulator receiver domain D1115_06005 PF06945 Protein of unknown function (DUF1289) D1115_06015 PF02872 5'-nucleotidase, C-terminal domain D1115_06015 PF00149 Calcineurin-like phosphoesterase D1115_06020 PF01386 Ribosomal L25p family D1115_06025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1115_06025 PF00672 HAMP domain D1115_06025 PF00512 His Kinase A (phospho-acceptor) domain D1115_06030 PF00486 Transcriptional regulatory protein, C terminal D1115_06030 PF00072 Response regulator receiver domain D1115_06045 PF00849 RNA pseudouridylate synthase D1115_06045 PF01479 S4 domain D1115_06050 PF07690 Major Facilitator Superfamily D1115_06060 PF00474 Sodium:solute symporter family D1115_06065 PF16875 Glycosyl hydrolase family 36 N-terminal domain D1115_06065 PF16874 Glycosyl hydrolase family 36 C-terminal domain D1115_06070 PF00356 Bacterial regulatory proteins, lacI family D1115_06080 PF01554 MatE D1115_06085 PF00005 ABC transporter D1115_06105 PF16295 Tetracyclin repressor-like, C-terminal domain D1115_06105 PF00440 Bacterial regulatory proteins, tetR family D1115_06110 PF09317 Domain of unknown function (DUF1974) D1115_06110 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D1115_06110 PF02770 Acyl-CoA dehydrogenase, middle domain D1115_06110 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D1115_06115 PF07055 Enoyl reductase FAD binding domain D1115_06115 PF12241 Trans-2-enoyl-CoA reductase catalytic region D1115_06115 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase D1115_06125 PF00462 Glutaredoxin D1115_06130 PF00465 Iron-containing alcohol dehydrogenase D1115_06135 PF01418 Helix-turn-helix domain, rpiR family D1115_06135 PF01380 SIS domain D1115_06140 PF00282 Pyridoxal-dependent decarboxylase conserved domain D1115_06150 PF03956 Lysine exporter LysO D1115_06160 PF04993 TfoX N-terminal domain D1115_06160 PF04994 TfoX C-terminal domain D1115_06165 PF13333 Integrase core domain D1115_06165 PF13276 HTH-like domain D1115_06165 PF00665 Integrase core domain D1115_06185 PF00512 His Kinase A (phospho-acceptor) domain D1115_06185 PF00497 Bacterial extracellular solute-binding proteins, family 3 D1115_06185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1115_06195 PF00266 Aminotransferase class-V D1115_06215 PF00005 ABC transporter D1115_06215 PF00664 ABC transporter transmembrane region D1115_06220 PF00005 ABC transporter D1115_06220 PF00664 ABC transporter transmembrane region D1115_06225 PF07992 Pyridine nucleotide-disulphide oxidoreductase D1115_06235 PF00266 Aminotransferase class-V D1115_06245 PF00990 Diguanylate cyclase, GGDEF domain D1115_06245 PF08448 PAS fold D1115_06250 PF00939 Sodium:sulfate symporter transmembrane region D1115_06260 PF00390 Malic enzyme, N-terminal domain D1115_06260 PF03949 Malic enzyme, NAD binding domain D1115_06275 PF01259 SAICAR synthetase D1115_06295 PF00691 OmpA family D1115_06295 PF05736 OprF membrane domain D1115_06310 PF13183 4Fe-4S dicluster domain D1115_06310 PF01565 FAD binding domain D1115_06310 PF02913 FAD linked oxidases, C-terminal domain D1115_06325 PF00221 Aromatic amino acid lyase D1115_06330 PF17391 Urocanase N-terminal domain D1115_06330 PF17392 Urocanase C-terminal domain D1115_06330 PF01175 Urocanase Rossmann-like domain D1115_06340 PF01979 Amidohydrolase family D1115_06345 PF00392 Bacterial regulatory proteins, gntR family D1115_06345 PF07702 UTRA domain D1115_06360 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D1115_06360 PF02770 Acyl-CoA dehydrogenase, middle domain D1115_06360 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D1115_06375 PF00990 Diguanylate cyclase, GGDEF domain D1115_06375 PF17158 Membrane-associated sensor, integral membrane domain D1115_06405 PF00092 von Willebrand factor type A domain D1115_06415 PF09827 CRISPR associated protein Cas2 D1115_06420 PF01867 CRISPR associated protein Cas1 D1115_06605 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) D1115_06605 PF02824 TGS domain D1115_06605 PF03129 Anticodon binding domain D1115_06605 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain D1115_06610 PF00707 Translation initiation factor IF-3, C-terminal domain D1115_06610 PF05198 Translation initiation factor IF-3, N-terminal domain D1115_06615 PF01632 Ribosomal protein L35 D1115_06620 PF00453 Ribosomal protein L20 D1115_06630 PF01906 Putative heavy-metal-binding D1115_06640 PF01409 tRNA synthetases class II core domain (F) D1115_06640 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain D1115_06645 PF03484 tRNA synthetase B5 domain D1115_06645 PF03147 Ferredoxin-fold anticodon binding domain D1115_06645 PF01588 Putative tRNA binding domain D1115_06645 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain D1115_06645 PF03483 B3/4 domain D1115_06670 PF00704 Glycosyl hydrolases family 18 D1115_06670 PF00041 Fibronectin type III domain D1115_06675 PF02525 Flavodoxin-like fold D1115_06680 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold D1115_06680 PF00271 Helicase conserved C-terminal domain D1115_06680 PF04408 Helicase associated domain (HA2) D1115_06680 PF11898 Domain of unknown function (DUF3418) D1115_06680 PF00270 DEAD/DEAH box helicase D1115_06690 PF01554 MatE D1115_06695 PF04069 Substrate binding domain of ABC-type glycine betaine transport system D1115_06700 PF00528 Binding-protein-dependent transport system inner membrane component D1115_06705 PF00571 CBS domain D1115_06705 PF00005 ABC transporter D1115_06720 PF02028 BCCT, betaine/carnitine/choline family transporter D1115_06725 PF00583 Acetyltransferase (GNAT) family D1115_06730 PF00202 Aminotransferase class-III D1115_06735 PF06339 Ectoine synthase D1115_06745 PF03466 LysR substrate binding domain D1115_06745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1115_06750 PF05368 NmrA-like family D1115_06780 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain D1115_06780 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain D1115_06785 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase D1115_06790 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain D1115_06790 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D1115_06830 PF01867 CRISPR associated protein Cas1 D1115_06880 PF00158 Sigma-54 interaction domain D1115_06880 PF02954 Bacterial regulatory protein, Fis family D1115_06880 PF01590 GAF domain D1115_06885 PF00171 Aldehyde dehydrogenase family D1115_06895 PF16868 NMT1-like family D1115_06900 PF01925 Sulfite exporter TauE/SafE D1115_06910 PF00392 Bacterial regulatory proteins, gntR family D1115_06910 PF07729 FCD domain D1115_06920 PF00285 Citrate synthase, C-terminal domain D1115_06925 PF00330 Aconitase family (aconitate hydratase) D1115_06925 PF00694 Aconitase C-terminal domain D1115_06930 PF04303 PrpF protein D1115_06935 PF16177 Acetyl-coenzyme A synthetase N-terminus D1115_06935 PF00501 AMP-binding enzyme D1115_06935 PF13193 AMP-binding enzyme C-terminal domain D1115_06955 PF04055 Radical SAM superfamily D1115_06960 PF06508 Queuosine biosynthesis protein QueC D1115_06965 PF00990 Diguanylate cyclase, GGDEF domain D1115_07000 PF10672 S-adenosylmethionine-dependent methyltransferase D1115_07000 PF17785 PUA-like domain D1115_07005 PF02743 Cache domain D1115_07005 PF00672 HAMP domain D1115_07005 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D1115_07010 PF00708 Acylphosphatase D1115_07015 PF04358 DsrC like protein D1115_07020 PF01027 Inhibitor of apoptosis-promoting Bax1 D1115_07025 PF00005 ABC transporter D1115_07030 PF00528 Binding-protein-dependent transport system inner membrane component D1115_07035 PF00528 Binding-protein-dependent transport system inner membrane component D1115_07040 PF00497 Bacterial extracellular solute-binding proteins, family 3 D1115_07050 PF04461 Protein of unknown function (DUF520) D1115_07055 PF00793 DAHP synthetase I family D1115_07075 PF01189 16S rRNA methyltransferase RsmB/F D1115_07075 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF D1115_07075 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF D1115_07095 PF00664 ABC transporter transmembrane region D1115_07095 PF00005 ABC transporter D1115_07105 PF04352 ProQ/FINO family D1115_07105 PF17516 ProQ C-terminal domain D1115_07110 PF11818 C-terminal domain of tail specific protease (DUF3340) D1115_07110 PF00595 PDZ domain D1115_07110 PF03572 Peptidase family S41 D1115_07110 PF17804 Tail specific protease N-terminal domain D1115_07120 PF11940 Domain of unknown function (DUF3458) Ig-like fold D1115_07120 PF01433 Peptidase family M1 domain D1115_07120 PF17432 Domain of unknown function (DUF3458_C) ARM repeats D1115_07135 PF01180 Dihydroorotate dehydrogenase D1115_07140 PF07126 Cell-division protein ZapC D1115_07145 PF02926 THUMP domain D1115_07145 PF10672 S-adenosylmethionine-dependent methyltransferase D1115_07145 PF01170 Putative RNA methylase family UPF0020 D1115_07155 PF12848 ABC transporter D1115_07155 PF16326 ABC transporter C-terminal domain D1115_07155 PF00005 ABC transporter D1115_07165 PF04957 Ribosome modulation factor D1115_07175 PF13654 AAA domain D1115_07175 PF05362 Lon protease (S16) C-terminal proteolytic domain D1115_07180 PF06303 MatP N-terminal domain D1115_07180 PF17414 MatP C-terminal ribbon-helix-helix domain D1115_07230 PF00115 Cytochrome C and Quinol oxidase polypeptide I D1115_07250 PF00403 Heavy-metal-associated domain D1115_07265 PF13545 Crp-like helix-turn-helix domain D1115_07265 PF00027 Cyclic nucleotide-binding domain D1115_07270 PF00582 Universal stress protein family D1115_07275 PF01171 PP-loop family D1115_07295 PF08402 TOBE domain D1115_07295 PF00005 ABC transporter D1115_07300 PF00528 Binding-protein-dependent transport system inner membrane component D1115_07305 PF00528 Binding-protein-dependent transport system inner membrane component D1115_07310 PF13416 Bacterial extracellular solute-binding protein D1115_07315 PF13416 Bacterial extracellular solute-binding protein D1115_07320 PF02146 Sir2 family D1115_07340 PF13247 4Fe-4S dicluster domain D1115_07345 PF01568 Molydopterin dinucleotide binding domain D1115_07345 PF00384 Molybdopterin oxidoreductase D1115_07345 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D1115_07375 PF02634 FdhD/NarQ family D1115_07400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1115_07400 PF00512 His Kinase A (phospho-acceptor) domain D1115_07405 PF00158 Sigma-54 interaction domain D1115_07405 PF02954 Bacterial regulatory protein, Fis family D1115_07405 PF00072 Response regulator receiver domain D1115_07410 PF12849 PBP superfamily domain D1115_07415 PF00528 Binding-protein-dependent transport system inner membrane component D1115_07420 PF00005 ABC transporter D1115_07420 PF08402 TOBE domain D1115_07425 PF12804 MobA-like NTP transferase domain D1115_07430 PF00994 Probable molybdopterin binding domain D1115_07430 PF03454 MoeA C-terminal region (domain IV) D1115_07430 PF03453 MoeA N-terminal region (domain I and II) D1115_07475 PF00072 Response regulator receiver domain D1115_07475 PF01339 CheB methylesterase D1115_07490 PF00677 Lumazine binding domain D1115_07495 PF01554 MatE D1115_07515 PF13402 Peptidase M60, enhancin and enhancin-like D1115_07515 PF17291 N-terminal domain of M60-like peptidases D1115_07515 PF13322 Domain of unknown function (DUF4092) D1115_07520 PF00132 Bacterial transferase hexapeptide (six repeats) D1115_07540 PF03729 Short repeat of unknown function (DUF308) D1115_07550 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family D1115_07555 PF00582 Universal stress protein family D1115_07570 PF01740 STAS domain D1115_07595 PF02954 Bacterial regulatory protein, Fis family D1115_07595 PF00072 Response regulator receiver domain D1115_07595 PF00158 Sigma-54 interaction domain D1115_07600 PF00534 Glycosyl transferases group 1 D1115_07600 PF13439 Glycosyltransferase Family 4 D1115_07630 PF00132 Bacterial transferase hexapeptide (six repeats) D1115_07630 PF12464 Maltose acetyltransferase D1115_07640 PF02706 Chain length determinant protein D1115_07640 PF13807 G-rich domain on putative tyrosine kinase D1115_07640 PF13614 AAA domain D1115_07655 PF02397 Bacterial sugar transferase D1115_07680 PF14497 Glutathione S-transferase, C-terminal domain D1115_07680 PF02798 Glutathione S-transferase, N-terminal domain D1115_07690 PF04209 homogentisate 1,2-dioxygenase D1115_07695 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D1115_07730 PF07969 Amidohydrolase family D1115_07740 PF01546 Peptidase family M20/M25/M40 D1115_07740 PF07687 Peptidase dimerisation domain D1115_07750 PF00005 ABC transporter D1115_07750 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D1115_07770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1115_07770 PF03466 LysR substrate binding domain D1115_07775 PF07690 Major Facilitator Superfamily D1115_07785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1115_07785 PF03466 LysR substrate binding domain D1115_07820 PF07690 Major Facilitator Superfamily D1115_07850 PF01048 Phosphorylase superfamily D1115_07855 PF00528 Binding-protein-dependent transport system inner membrane component D1115_07860 PF00528 Binding-protein-dependent transport system inner membrane component D1115_07865 PF00005 ABC transporter D1115_07865 PF08402 TOBE domain D1115_07870 PF00701 Dihydrodipicolinate synthetase family D1115_07875 PF02423 Ornithine cyclodeaminase/mu-crystallin family D1115_07885 PF01266 FAD dependent oxidoreductase D1115_07890 PF05544 Proline racemase D1115_07895 PF00171 Aldehyde dehydrogenase family D1115_07900 PF00392 Bacterial regulatory proteins, gntR family D1115_07915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1115_07915 PF00512 His Kinase A (phospho-acceptor) domain D1115_07915 PF09456 RcsC Alpha-Beta-Loop (ABL) D1115_07915 PF00072 Response regulator receiver domain D1115_07930 PF01863 Protein of unknown function DUF45 D1115_07940 PF03466 LysR substrate binding domain D1115_07940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1115_07975 PF01235 Sodium:alanine symporter family D1115_07980 PF01810 LysE type translocator D1115_07985 PF02074 Carboxypeptidase Taq (M32) metallopeptidase D1115_07990 PF03279 Bacterial lipid A biosynthesis acyltransferase D1115_07995 PF01810 LysE type translocator D1115_08000 PF13520 Amino acid permease D1115_08010 PF04204 Homoserine O-succinyltransferase D1115_08020 PF00005 ABC transporter D1115_08025 PF01032 FecCD transport family D1115_08030 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family D1115_08045 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase D1115_08050 PF02654 Cobalamin-5-phosphate synthase D1115_08055 PF02277 Phosphoribosyltransferase D1115_08065 PF13460 NAD(P)H-binding D1115_08075 PF00392 Bacterial regulatory proteins, gntR family D1115_08075 PF07702 UTRA domain D1115_08080 PF02378 Phosphotransferase system, EIIC D1115_08080 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D1115_08080 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit D1115_08085 PF07748 Glycosyl hydrolases family 38 C-terminal domain D1115_08085 PF09261 Alpha mannosidase middle domain D1115_08085 PF01074 Glycosyl hydrolases family 38 N-terminal domain D1115_08090 PF01238 Phosphomannose isomerase type I D1115_08110 PF03788 LrgA family D1115_08120 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region D1115_08120 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region D1115_08125 PF02222 ATP-grasp domain D1115_08130 PF05724 Thiopurine S-methyltransferase (TPMT) D1115_08140 PF00216 Bacterial DNA-binding protein D1115_08150 PF17156 Gammaproteobacterial periplasmic sensor domain D1115_08150 PF00990 Diguanylate cyclase, GGDEF domain D1115_08160 PF00012 Hsp70 protein D1115_08165 PF00012 Hsp70 protein D1115_08180 PF00664 ABC transporter transmembrane region D1115_08180 PF00005 ABC transporter D1115_08185 PF00005 ABC transporter D1115_08185 PF00664 ABC transporter transmembrane region D1115_08200 PF00072 Response regulator receiver domain D1115_08205 PF03222 Tryptophan/tyrosine permease family D1115_08210 PF00465 Iron-containing alcohol dehydrogenase D1115_08220 PF03741 Integral membrane protein TerC family D1115_08225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1115_08225 PF03466 LysR substrate binding domain D1115_08230 PF04055 Radical SAM superfamily D1115_08235 PF11230 Protein of unknown function (DUF3029) D1115_08245 PF01966 HD domain D1115_08245 PF11871 Domain of unknown function (DUF3391) D1115_08250 PF00563 EAL domain D1115_08250 PF00990 Diguanylate cyclase, GGDEF domain D1115_08255 PF02954 Bacterial regulatory protein, Fis family D1115_08255 PF00158 Sigma-54 interaction domain D1115_08255 PF00072 Response regulator receiver domain D1115_08260 PF00497 Bacterial extracellular solute-binding proteins, family 3 D1115_08260 PF00512 His Kinase A (phospho-acceptor) domain D1115_08260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1115_08285 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA D1115_08290 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system D1115_08295 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D1115_08645 PF03575 Peptidase family S51 D1115_08870 PF13419 Haloacid dehalogenase-like hydrolase D1115_08890 PF04229 GrpB protein D1115_08925 PF05016 ParE toxin of type II toxin-antitoxin system, parDE D1115_08945 PF00293 NUDIX domain D1115_09290 PF13302 Acetyltransferase (GNAT) domain D1115_09295 PF18024 Helix-turn-helix domain D1115_09295 PF00158 Sigma-54 interaction domain D1115_09305 PF04317 YcjX-like family, DUF463 D1115_09320 PF04715 Anthranilate synthase component I, N terminal region D1115_09320 PF00425 chorismate binding enzyme D1115_09330 PF03222 Tryptophan/tyrosine permease family D1115_09335 PF03315 Serine dehydratase beta chain D1115_09335 PF03313 Serine dehydratase alpha chain D1115_09345 PF01242 6-pyruvoyl tetrahydropterin synthase D1115_09350 PF01336 OB-fold nucleic acid binding domain D1115_09350 PF00152 tRNA synthetases class II (D, K and N) D1115_09380 PF11490 DNA polymerase III polC-type N-terminus II D1115_09380 PF17657 Bacterial DNA polymerase III alpha subunit finger domain D1115_09380 PF14480 DNA polymerase III polC-type N-terminus I D1115_09380 PF07733 Bacterial DNA polymerase III alpha NTPase domain D1115_09380 PF14579 Helix-hairpin-helix motif D1115_09380 PF02811 PHP domain D1115_09380 PF00929 Exonuclease D1115_09385 PF00672 HAMP domain D1115_09385 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D1115_09390 PF02028 BCCT, betaine/carnitine/choline family transporter D1115_09400 PF00072 Response regulator receiver domain D1115_09400 PF00196 Bacterial regulatory proteins, luxR family D1115_09405 PF17200 Single Cache domain 2 D1115_09405 PF07730 Histidine kinase D1115_09410 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component D1115_09420 PF03480 Bacterial extracellular solute-binding protein, family 7 D1115_09435 PF00753 Metallo-beta-lactamase superfamily D1115_09440 PF05951 Bacterial protein of unknown function (DUF882) D1115_09450 PF00925 GTP cyclohydrolase II D1115_09470 PF00665 Integrase core domain D1115_09470 PF13333 Integrase core domain D1115_09470 PF13276 HTH-like domain D1115_09475 PF13333 Integrase core domain D1115_09475 PF00665 Integrase core domain D1115_09475 PF13276 HTH-like domain D1115_09485 PF00521 DNA gyrase/topoisomerase IV, subunit A D1115_09485 PF03989 DNA gyrase C-terminal domain, beta-propeller D1115_09500 PF00317 Ribonucleotide reductase, all-alpha domain D1115_09500 PF02867 Ribonucleotide reductase, barrel domain D1115_09500 PF03477 ATP cone domain D1115_09505 PF00268 Ribonucleotide reductase, small chain D1115_09515 PF00994 Probable molybdopterin binding domain D1115_09525 PF01842 ACT domain D1115_09525 PF02153 Prephenate dehydrogenase D1115_09530 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain D1115_09535 PF03435 Saccharopine dehydrogenase NADP binding domain D1115_09535 PF16653 Saccharopine dehydrogenase C-terminal domain D1115_09540 PF00202 Aminotransferase class-III D1115_09570 PF01066 CDP-alcohol phosphatidyltransferase D1115_09575 PF02151 UvrB/uvrC motif D1115_09575 PF08459 UvrC Helix-hairpin-helix N-terminal D1115_09575 PF01541 GIY-YIG catalytic domain D1115_09580 PF00072 Response regulator receiver domain D1115_09580 PF00196 Bacterial regulatory proteins, luxR family D1115_09585 PF00136 DNA polymerase family B D1115_09585 PF03104 DNA polymerase family B, exonuclease domain D1115_09595 PF08207 Elongation factor P (EF-P) KOW-like domain D1115_09595 PF09285 Elongation factor P, C-terminal D1115_09595 PF01132 Elongation factor P (EF-P) OB domain D1115_09600 PF04269 Protein of unknown function, DUF440 D1115_09605 PF01479 S4 domain D1115_09605 PF00849 RNA pseudouridylate synthase D1115_09610 PF01300 Telomere recombination D1115_09615 PF02811 PHP domain D1115_09620 PF08056 Tryptophan operon leader peptide D1115_09625 PF04715 Anthranilate synthase component I, N terminal region D1115_09625 PF00425 chorismate binding enzyme D1115_09630 PF00117 Glutamine amidotransferase class-I D1115_09635 PF00591 Glycosyl transferase family, a/b domain D1115_09635 PF02885 Glycosyl transferase family, helical bundle domain D1115_09640 PF00218 Indole-3-glycerol phosphate synthase D1115_09640 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase D1115_09645 PF00291 Pyridoxal-phosphate dependent enzyme D1115_09650 PF00290 Tryptophan synthase alpha chain D1115_09655 PF00375 Sodium:dicarboxylate symporter family D1115_09660 PF04279 Intracellular septation protein A D1115_09665 PF03061 Thioesterase superfamily D1115_09670 PF03795 YCII-related domain D1115_09680 PF01717 Cobalamin-independent synthase, Catalytic domain D1115_09680 PF08267 Cobalamin-independent synthase, N-terminal domain D1115_09685 PF03466 LysR substrate binding domain D1115_09685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1115_09705 PF11842 Domain of unknown function (DUF3362) D1115_09705 PF04055 Radical SAM superfamily D1115_09705 PF08497 Radical SAM N-terminal D1115_09710 PF07992 Pyridine nucleotide-disulphide oxidoreductase D1115_09710 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D1115_09720 PF01042 Endoribonuclease L-PSP D1115_09725 PF08348 YheO-like PAS domain D1115_09725 PF13309 HTH domain D1115_09730 PF00672 HAMP domain D1115_09730 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D1115_09740 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase D1115_09745 PF00535 Glycosyl transferase family 2 D1115_09755 PF00672 HAMP domain D1115_09755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1115_09755 PF00512 His Kinase A (phospho-acceptor) domain D1115_09775 PF03466 LysR substrate binding domain D1115_09775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1115_09780 PF00529 HlyD membrane-fusion protein of T1SS D1115_09780 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D1115_09825 PF00085 Thioredoxin D1115_09830 PF02683 Cytochrome C biogenesis protein transmembrane region D1115_09830 PF11412 Disulphide bond corrector protein DsbC D1115_09835 PF03466 LysR substrate binding domain D1115_09835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1115_09840 PF01966 HD domain D1115_09850 PF16875 Glycosyl hydrolase family 36 N-terminal domain D1115_09850 PF16874 Glycosyl hydrolase family 36 C-terminal domain D1115_09865 PF02836 Glycosyl hydrolases family 2, TIM barrel domain D1115_09865 PF02837 Glycosyl hydrolases family 2, sugar binding domain D1115_09865 PF02929 Beta galactosidase small chain D1115_09865 PF00703 Glycosyl hydrolases family 2 D1115_09865 PF16353 Domain of unknown function(DUF4981) D1115_09870 PF00356 Bacterial regulatory proteins, lacI family D1115_09880 PF02470 MlaD protein D1115_09885 PF03886 ABC-type transport auxiliary lipoprotein component D1115_09900 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D1115_09905 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family D1115_09920 PF00216 Bacterial DNA-binding protein D1115_09925 PF00575 S1 RNA binding domain D1115_09930 PF02224 Cytidylate kinase D1115_09935 PF01343 Peptidase family S49 D1115_09935 PF08496 Peptidase family S49 N-terminal D1115_09940 PF00106 short chain dehydrogenase D1115_09960 PF00072 Response regulator receiver domain D1115_09960 PF01584 CheW-like domain D1115_09965 PF00480 ROK family D1115_09995 PF00367 phosphotransferase system, EIIB D1115_09995 PF02378 Phosphotransferase system, EIIC D1115_10000 PF01026 TatD related DNase D1115_10005 PF09115 DNA polymerase III, delta subunit, C terminal D1115_10010 PF02223 Thymidylate kinase D1115_10015 PF02618 YceG-like family D1115_10025 PF02801 Beta-ketoacyl synthase, C-terminal domain D1115_10025 PF00109 Beta-ketoacyl synthase, N-terminal domain D1115_10030 PF00550 Phosphopantetheine attachment site D1115_10040 PF00698 Acyl transferase domain D1115_10045 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal D1115_10045 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III D1115_10050 PF02504 Fatty acid synthesis protein D1115_10060 PF02620 Large ribosomal RNA subunit accumulation protein YceD D1115_10070 PF00849 RNA pseudouridylate synthase D1115_10070 PF01479 S4 domain D1115_10075 PF12111 Polyribonucleotide phosphorylase C terminal D1115_10075 PF10150 Ribonuclease E/G family D1115_10075 PF00575 S1 RNA binding domain D1115_10080 PF01740 STAS domain D1115_10080 PF00916 Sulfate permease family D1115_10085 PF01451 Low molecular weight phosphotyrosine protein phosphatase D1115_10090 PF12557 Cob(I)alamin adenosyltransferase N terminal D1115_10090 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP D1115_10095 PF05170 AsmA family D1115_10100 PF00485 Phosphoribulokinase / Uridine kinase family D1115_10105 PF10609 NUBPL iron-transfer P-loop NTPase D1115_10110 PF09334 tRNA synthetases class I (M) D1115_10110 PF01588 Putative tRNA binding domain D1115_10120 PF00392 Bacterial regulatory proteins, gntR family D1115_10120 PF07840 FadR C-terminal domain D1115_10125 PF06450 Bacterial Na+/H+ antiporter B (NhaB) D1115_10130 PF02600 Disulfide bond formation protein DsbB D1115_10135 PF07517 SecA DEAD-like domain D1115_10135 PF02810 SEC-C motif D1115_10135 PF01043 SecA preprotein cross-linking domain D1115_10135 PF07516 SecA Wing and Scaffold domain D1115_10140 PF01207 Dihydrouridine synthase (Dus) D1115_10155 PF00005 ABC transporter D1115_10160 PF02653 Branched-chain amino acid transport system / permease component D1115_10170 PF04217 Protein of unknown function, DUF412 D1115_10175 PF00871 Acetokinase family D1115_10180 PF07085 DRTGG domain D1115_10180 PF01515 Phosphate acetyl/butaryl transferase D1115_10185 PF13194 Domain of unknown function (DUF4010) D1115_10190 PF13409 Glutathione S-transferase, N-terminal domain D1115_10195 PF00850 Histone deacetylase domain D1115_10200 PF13416 Bacterial extracellular solute-binding protein D1115_10205 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D1115_10205 PF00005 ABC transporter D1115_10210 PF00005 ABC transporter D1115_10210 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D1115_10215 PF00528 Binding-protein-dependent transport system inner membrane component D1115_10215 PF12911 N-terminal TM domain of oligopeptide transport permease C D1115_10220 PF00528 Binding-protein-dependent transport system inner membrane component D1115_10225 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D1115_10230 PF02391 MoaE protein D1115_10235 PF02597 ThiS family D1115_10240 PF01967 MoaC family D1115_10245 PF00994 Probable molybdopterin binding domain D1115_10250 PF04055 Radical SAM superfamily D1115_10250 PF06463 Molybdenum Cofactor Synthesis C D1115_10255 PF01933 Uncharacterised protein family UPF0052 D1115_10260 PF01627 Hpt domain D1115_10265 PF00072 Response regulator receiver domain D1115_10265 PF02954 Bacterial regulatory protein, Fis family D1115_10265 PF00158 Sigma-54 interaction domain D1115_10270 PF02151 UvrB/uvrC motif D1115_10270 PF12344 Ultra-violet resistance protein B D1115_10270 PF17757 UvrB interaction domain D1115_10270 PF00271 Helicase conserved C-terminal domain D1115_10270 PF04851 Type III restriction enzyme, res subunit D1115_10280 PF02901 Pyruvate formate lyase-like D1115_10280 PF01228 Glycine radical D1115_10285 PF02508 Rnf-Nqr subunit, membrane protein D1115_10290 PF04060 Putative Fe-S cluster D1115_10295 PF13375 RnfC Barrel sandwich hybrid domain D1115_10295 PF12838 4Fe-4S dicluster domain D1115_10295 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit D1115_10295 PF10531 SLBB domain D1115_10300 PF03116 NQR2, RnfD, RnfE family D1115_10310 PF02508 Rnf-Nqr subunit, membrane protein D1115_10315 PF00730 HhH-GPD superfamily base excision DNA repair protein D1115_10315 PF00633 Helix-hairpin-helix motif D1115_10315 PF10576 Iron-sulfur binding domain of endonuclease III D1115_10320 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D1115_10325 PF10952 Protein of unknown function (DUF2753) D1115_10330 PF18393 MotY N-terminal domain D1115_10330 PF00691 OmpA family D1115_10340 PF13726 Na+-H+ antiporter family D1115_10340 PF03553 Na+/H+ antiporter family D1115_10350 PF00462 Glutaredoxin D1115_10355 PF02777 Iron/manganese superoxide dismutases, C-terminal domain D1115_10355 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain D1115_10375 PF01914 MarC family integral membrane protein D1115_10380 PF00520 Ion transport protein D1115_10380 PF00027 Cyclic nucleotide-binding domain D1115_10390 PF03553 Na+/H+ antiporter family D1115_10410 PF04245 37-kD nucleoid-associated bacterial protein D1115_10415 PF07208 Protein of unknown function (DUF1414) D1115_10430 PF00850 Histone deacetylase domain D1115_10435 PF13378 Enolase C-terminal domain-like D1115_10435 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain D1115_10445 PF08666 SAF domain D1115_10445 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus D1115_10470 PF00881 Nitroreductase family D1115_10475 PF00724 NADH:flavin oxidoreductase / NADH oxidase family D1115_10475 PF07992 Pyridine nucleotide-disulphide oxidoreductase D1115_10480 PF01343 Peptidase family S49 D1115_10485 PF00710 Asparaginase, N-terminal D1115_10485 PF17763 Glutaminase/Asparaginase C-terminal domain D1115_10490 PF07023 Protein of unknown function (DUF1315) D1115_10500 PF01641 SelR domain D1115_10505 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain D1115_10505 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain D1115_10510 PF01263 Aldose 1-epimerase D1115_10515 PF13847 Methyltransferase domain D1115_10530 PF02028 BCCT, betaine/carnitine/choline family transporter D1115_10535 PF00873 AcrB/AcrD/AcrF family D1115_10540 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D1115_10540 PF00529 HlyD membrane-fusion protein of T1SS D1115_10595 PF03601 Conserved hypothetical protein 698 D1115_10610 PF13378 Enolase C-terminal domain-like D1115_10615 PF00378 Enoyl-CoA hydratase/isomerase D1115_10620 PF12697 Alpha/beta hydrolase family D1115_10625 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D1115_10625 PF16582 Middle domain of thiamine pyrophosphate D1115_10625 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D1115_10630 PF00425 chorismate binding enzyme D1115_10635 PF00155 Aminotransferase class I and II D1115_10665 PF13145 PPIC-type PPIASE domain D1115_10670 PF00216 Bacterial DNA-binding protein D1115_10675 PF02190 ATP-dependent protease La (LON) substrate-binding domain D1115_10675 PF05362 Lon protease (S16) C-terminal proteolytic domain D1115_10675 PF00004 ATPase family associated with various cellular activities (AAA) D1115_10680 PF07724 AAA domain (Cdc48 subfamily) D1115_10680 PF10431 C-terminal, D2-small domain, of ClpB protein D1115_10680 PF06689 ClpX C4-type zinc finger D1115_10690 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D1115_10690 PF05698 Bacterial trigger factor protein (TF) C-terminus D1115_10690 PF05697 Bacterial trigger factor protein (TF) D1115_10700 PF02696 Uncharacterized ACR, YdiU/UPF0061 family D1115_10715 PF02386 Cation transport protein D1115_10720 PF02254 TrkA-N domain D1115_10720 PF02080 TrkA-C domain D1115_10725 PF00271 Helicase conserved C-terminal domain D1115_10725 PF00270 DEAD/DEAH box helicase D1115_10745 PF00672 HAMP domain D1115_10745 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D1115_10745 PF02743 Cache domain D1115_10750 PF13356 Arm DNA-binding domain D1115_10750 PF00589 Phage integrase family D1115_10825 PF04851 Type III restriction enzyme, res subunit D1115_10825 PF08774 VRR-NUC domain D1115_10830 PF01555 DNA methylase D1115_10860 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain D1115_10860 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain D1115_10865 PF07670 Nucleoside recognition D1115_10865 PF07662 Na+ dependent nucleoside transporter C-terminus D1115_10865 PF01773 Na+ dependent nucleoside transporter N-terminus D1115_10875 PF13406 Transglycosylase SLT domain D1115_10885 PF03775 Septum formation inhibitor MinC, C-terminal domain D1115_10885 PF05209 Septum formation inhibitor MinC, N-terminal domain D1115_10890 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain D1115_10895 PF03776 Septum formation topological specificity factor MinE D1115_10905 PF13193 AMP-binding enzyme C-terminal domain D1115_10905 PF00501 AMP-binding enzyme D1115_10910 PF00561 alpha/beta hydrolase fold D1115_10925 PF00814 Glycoprotease family D1115_10930 PF13307 Helicase C-terminal domain D1115_10930 PF04851 Type III restriction enzyme, res subunit D1115_10935 PF00551 Formyl transferase D1115_10935 PF01842 ACT domain D1115_10940 PF06185 YecM protein D1115_10945 PF00750 tRNA synthetases class I (R) D1115_10945 PF03485 Arginyl tRNA synthetase N terminal domain D1115_10945 PF05746 DALR anticodon binding domain D1115_10960 PF07670 Nucleoside recognition D1115_10960 PF02421 Ferrous iron transport protein B D1115_10960 PF17910 FeoB cytosolic helical domain D1115_10960 PF07664 Ferrous iron transport protein B C terminus D1115_10965 PF04023 FeoA domain D1115_10975 PF01297 Zinc-uptake complex component A periplasmic D1115_10985 PF00950 ABC 3 transport family D1115_10990 PF02629 CoA binding domain D1115_10990 PF00549 CoA-ligase D1115_10995 PF08442 ATP-grasp domain D1115_10995 PF00549 CoA-ligase D1115_11000 PF00364 Biotin-requiring enzyme D1115_11000 PF02817 e3 binding domain D1115_11000 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) D1115_11005 PF16078 2-oxoglutarate dehydrogenase N-terminus D1115_11005 PF02779 Transketolase, pyrimidine binding domain D1115_11005 PF16870 2-oxoglutarate dehydrogenase C-terminal D1115_11005 PF00676 Dehydrogenase E1 component D1115_11010 PF13085 2Fe-2S iron-sulfur cluster binding domain D1115_11015 PF02910 Fumarate reductase flavoprotein C-term D1115_11015 PF00890 FAD binding domain D1115_11020 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit D1115_11025 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit D1115_11030 PF00285 Citrate synthase, C-terminal domain D1115_11035 PF01784 NIF3 (NGG1p interacting factor 3) D1115_11045 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III D1115_11045 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II D1115_11045 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain D1115_11045 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I D1115_11050 PF17206 SeqA protein N-terminal domain D1115_11050 PF03925 SeqA protein C-terminal domain D1115_11065 PF00258 Flavodoxin D1115_11075 PF01475 Ferric uptake regulator family D1115_11080 PF00749 tRNA synthetases class I (E and Q), catalytic domain D1115_11080 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain D1115_11085 PF02378 Phosphotransferase system, EIIC D1115_11085 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 D1115_11085 PF00367 phosphotransferase system, EIIB D1115_11095 PF01979 Amidohydrolase family D1115_11105 PF02254 TrkA-N domain D1115_11105 PF00999 Sodium/hydrogen exchanger family D1115_11110 PF00733 Asparagine synthase D1115_11110 PF13537 Glutamine amidotransferase domain D1115_11115 PF02357 Transcription termination factor nusG D1115_11120 PF00854 POT family D1115_11125 PF00762 Ferrochelatase D1115_11130 PF05191 Adenylate kinase, active site lid D1115_11135 PF00183 Hsp90 protein D1115_11135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1115_11140 PF00486 Transcriptional regulatory protein, C terminal D1115_11145 PF17323 Trans-membrane regulatory protein ToxS D1115_11160 PF12850 Calcineurin-like phosphoesterase superfamily domain D1115_11170 PF08338 Domain of unknown function (DUF1731) D1115_11170 PF01370 NAD dependent epimerase/dehydratase family D1115_11175 PF00106 short chain dehydrogenase D1115_11185 PF00085 Thioredoxin D1115_11190 PF16200 C-terminal region of band_7 D1115_11190 PF01145 SPFH domain / Band 7 family D1115_11195 PF01957 NfeD-like C-terminal, partner-binding D1115_11205 PF03573 outer membrane porin, OprD family D1115_11215 PF03120 NAD-dependent DNA ligase OB-fold domain D1115_11215 PF01653 NAD-dependent DNA ligase adenylation domain D1115_11215 PF00533 BRCA1 C Terminus (BRCT) domain D1115_11215 PF12826 Helix-hairpin-helix motif D1115_11215 PF03119 NAD-dependent DNA ligase C4 zinc finger domain D1115_11220 PF04354 ZipA, C-terminal FtsZ-binding domain D1115_11230 PF00291 Pyridoxal-phosphate dependent enzyme D1115_11240 PF00381 PTS HPr component phosphorylation site D1115_11245 PF00391 PEP-utilising enzyme, mobile domain D1115_11245 PF05524 PEP-utilising enzyme, N-terminal D1115_11245 PF02896 PEP-utilising enzyme, TIM barrel domain D1115_11250 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 D1115_11255 PF00700 Bacterial flagellin C-terminal helical region D1115_11255 PF07196 Flagellin hook IN motif D1115_11255 PF00669 Bacterial flagellin N-terminal helical region D1115_11260 PF00669 Bacterial flagellin N-terminal helical region D1115_11260 PF07196 Flagellin hook IN motif D1115_11260 PF00700 Bacterial flagellin C-terminal helical region D1115_11270 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D1115_11270 PF07196 Flagellin hook IN motif D1115_11275 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase D1115_11275 PF10135 Rod binding protein D1115_11280 PF02119 Flagellar P-ring protein D1115_11285 PF02107 Flagellar L-ring protein D1115_11290 PF00460 Flagella basal body rod protein D1115_11290 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D1115_11295 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D1115_11295 PF00460 Flagella basal body rod protein D1115_11300 PF07559 Flagellar basal body protein FlaE D1115_11300 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D1115_11300 PF00460 Flagella basal body rod protein D1115_11305 PF13861 FlgD Tudor-like domain D1115_11305 PF13860 FlgD Ig-like domain D1115_11305 PF03963 Flagellar hook capping protein - N-terminal region D1115_11310 PF00460 Flagella basal body rod protein D1115_11310 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D1115_11315 PF00460 Flagella basal body rod protein D1115_11320 PF03705 CheR methyltransferase, all-alpha domain D1115_11320 PF01739 CheR methyltransferase, SAM binding domain D1115_11325 PF00072 Response regulator receiver domain D1115_11325 PF01584 CheW-like domain D1115_11370 PF01389 OmpA-like transmembrane domain D1115_11370 PF00691 OmpA family D1115_11375 PF00749 tRNA synthetases class I (E and Q), catalytic domain D1115_11400 PF02838 Glycosyl hydrolase family 20, domain 2 D1115_11400 PF00728 Glycosyl hydrolase family 20, catalytic domain D1115_11400 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain D1115_11400 PF03173 Putative carbohydrate binding domain D1115_11420 PF01713 Smr domain D1115_11425 PF00849 RNA pseudouridylate synthase D1115_11425 PF01479 S4 domain D1115_11430 PF04073 Aminoacyl-tRNA editing domain D1115_11435 PF00149 Calcineurin-like phosphoesterase D1115_11435 PF02872 5'-nucleotidase, C-terminal domain D1115_11440 PF00793 DAHP synthetase I family D1115_11445 PF13369 Transglutaminase-like superfamily D1115_11450 PF04247 Invasion gene expression up-regulator, SirB D1115_11455 PF13847 Methyltransferase domain D1115_11455 PF17827 PrmC N-terminal domain D1115_11465 PF01488 Shikimate / quinate 5-dehydrogenase D1115_11465 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain D1115_11465 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain D1115_11470 PF03550 Outer membrane lipoprotein LolB D1115_11475 PF08544 GHMP kinases C terminal D1115_11475 PF00288 GHMP kinases N terminal domain D1115_11480 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase D1115_11480 PF14572 Phosphoribosyl synthetase-associated domain D1115_11485 PF01195 Peptidyl-tRNA hydrolase D1115_11490 PF01926 50S ribosome-binding GTPase D1115_11490 PF06071 Protein of unknown function (DUF933) D1115_11600 PF01494 FAD binding domain D1115_11610 PF04055 Radical SAM superfamily D1115_11610 PF01938 TRAM domain D1115_11610 PF00919 Uncharacterized protein family UPF0004 D1115_11615 PF02562 PhoH-like protein D1115_11625 PF03471 Transporter associated domain D1115_11625 PF00571 CBS domain D1115_11630 PF00795 Carbon-nitrogen hydrolase D1115_11635 PF07295 Zinc-ribbon containing domain D1115_11640 PF13603 Leucyl-tRNA synthetase, Domain 2 D1115_11640 PF00133 tRNA synthetases class I (I, L, M and V) D1115_11640 PF08264 Anticodon-binding domain of tRNA D1115_11645 PF04390 Lipopolysaccharide-assembly D1115_11660 PF02590 Predicted SPOUT methyltransferase D1115_11665 PF00905 Penicillin binding protein transpeptidase domain D1115_11665 PF03717 Penicillin-binding Protein dimerisation domain D1115_11670 PF01098 Cell cycle protein D1115_11675 PF05036 Sporulation related domain D1115_11675 PF03330 Lytic transglycolase D1115_11680 PF07943 Penicillin-binding protein 5, C-terminal domain D1115_11680 PF00768 D-alanyl-D-alanine carboxypeptidase D1115_11685 PF04359 Protein of unknown function (DUF493) D1115_11690 PF03099 Biotin/lipoate A/B protein ligase family D1115_11695 PF04055 Radical SAM superfamily D1115_11695 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family D1115_11700 PF00464 Serine hydroxymethyltransferase D1115_11705 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) D1115_11705 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 D1115_11710 PF16657 Maltogenic Amylase, C-terminal domain D1115_11710 PF00128 Alpha amylase, catalytic domain D1115_11715 PF00367 phosphotransferase system, EIIB D1115_11715 PF02378 Phosphotransferase system, EIIC D1115_11720 PF00356 Bacterial regulatory proteins, lacI family D1115_11730 PF00005 ABC transporter D1115_11730 PF09383 NIL domain D1115_11735 PF00528 Binding-protein-dependent transport system inner membrane component D1115_11740 PF03180 NLPA lipoprotein D1115_11745 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) D1115_11750 PF07348 Syd protein (SUKH-2) D1115_11755 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term D1115_11755 PF14489 QueF-like protein D1115_11765 PF00072 Response regulator receiver domain D1115_11765 PF00990 Diguanylate cyclase, GGDEF domain D1115_11770 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases D1115_11770 PF03641 Possible lysine decarboxylase D1115_11770 PF11892 Domain of unknown function (DUF3412) D1115_11775 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain D1115_11775 PF01367 5'-3' exonuclease, C-terminal SAM fold D1115_11780 PF01728 FtsJ-like methyltransferase D1115_11780 PF18125 RlmM ferredoxin-like domain D1115_11785 PF04241 Protein of unknown function (DUF423) D1115_11800 PF02568 Thiamine biosynthesis protein (ThiI) D1115_11800 PF02926 THUMP domain D1115_11805 PF00691 OmpA family D1115_11805 PF13677 Membrane MotB of proton-channel complex MotA/MotB D1115_11810 PF01618 MotA/TolQ/ExbB proton channel family D1115_11815 PF02609 Exonuclease VII small subunit D1115_11820 PF00348 Polyprenyl synthetase D1115_11825 PF02780 Transketolase, C-terminal domain D1115_11825 PF02779 Transketolase, pyrimidine binding domain D1115_11825 PF13292 1-deoxy-D-xylulose-5-phosphate synthase D1115_11830 PF04608 Phosphatidylglycerophosphatase A D1115_11835 PF02769 AIR synthase related protein, C-terminal domain D1115_11835 PF00586 AIR synthase related protein, N-terminal domain D1115_11840 PF01029 NusB family D1115_11845 PF00885 6,7-dimethyl-8-ribityllumazine synthase D1115_11850 PF00925 GTP cyclohydrolase II D1115_11850 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase D1115_11855 PF00677 Lumazine binding domain D1115_11860 PF01872 RibD C-terminal domain D1115_11860 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region D1115_11865 PF03477 ATP cone domain D1115_11870 PF00171 Aldehyde dehydrogenase family D1115_11875 PF01472 PUA domain D1115_11875 PF00696 Amino acid kinase family D1115_11880 PF07417 Sigma factor-binding transcriptional regulator Crl D1115_11890 PF00156 Phosphoribosyl transferase domain D1115_11900 PF00860 Permease family D1115_11905 PF01546 Peptidase family M20/M25/M40 D1115_11905 PF07687 Peptidase dimerisation domain D1115_11925 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain D1115_11925 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal D1115_11925 PF02769 AIR synthase related protein, C-terminal domain D1115_11930 PF00497 Bacterial extracellular solute-binding proteins, family 3 D1115_11930 PF01464 Transglycosylase SLT domain D1115_11945 PF03806 AbgT putative transporter family D1115_11970 PF07963 Prokaryotic N-terminal methylation motif D1115_11970 PF00114 Pilin (bacterial filament) D1115_11975 PF01556 DnaJ C terminal domain D1115_11975 PF00684 DnaJ central domain D1115_11975 PF00226 DnaJ domain D1115_11980 PF00012 Hsp70 protein D1115_11985 PF00375 Sodium:dicarboxylate symporter family D1115_11990 PF01025 GrpE D1115_11995 PF01513 ATP-NAD kinase D1115_12000 PF02463 RecF/RecN/SMC N terminal domain D1115_12005 PF04355 SmpA / OmlA family D1115_12010 PF03658 RnfH family Ubiquitin D1115_12015 PF03364 Polyketide cyclase / dehydrase and lipid transport D1115_12020 PF01668 SmpB protein D1115_12030 PF13356 Arm DNA-binding domain D1115_12030 PF00589 Phage integrase family D1115_12045 PF02384 N-6 DNA Methylase D1115_12045 PF12161 HsdM N-terminal domain D1115_12065 PF11867 Domain of unknown function (DUF3387) D1115_12065 PF18766 SWI2/SNF2 ATPase D1115_12065 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) D1115_12085 PF02796 Helix-turn-helix domain of resolvase D1115_12085 PF00239 Resolvase, N terminal domain D1115_12210 PF00202 Aminotransferase class-III D1115_12215 PF01053 Cys/Met metabolism PLP-dependent enzyme D1115_12220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1115_12220 PF03466 LysR substrate binding domain D1115_12225 PF01266 FAD dependent oxidoreductase D1115_12235 PF01235 Sodium:alanine symporter family D1115_12240 PF01184 GPR1/FUN34/yaaH family D1115_12245 PF00958 GMP synthase C terminal domain D1115_12245 PF02540 NAD synthase D1115_12245 PF00117 Glutamine amidotransferase class-I D1115_12250 PF00478 IMP dehydrogenase / GMP reductase domain D1115_12250 PF00571 CBS domain D1115_12255 PF13742 OB-fold nucleic acid binding domain D1115_12255 PF02601 Exonuclease VII, large subunit D1115_12270 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal D1115_12270 PF01926 50S ribosome-binding GTPase D1115_12275 PF13360 PQQ-like domain D1115_12280 PF09976 Tetratricopeptide repeat-like domain D1115_12285 PF03129 Anticodon binding domain D1115_12285 PF13393 Histidyl-tRNA synthetase D1115_12290 PF04551 GcpE protein D1115_12295 PF13464 Domain of unknown function (DUF4115) D1115_12300 PF04055 Radical SAM superfamily D1115_12305 PF00334 Nucleoside diphosphate kinase D1115_12310 PF00883 Cytosol aminopeptidase family, catalytic domain D1115_12310 PF12404 Peptidase D1115_12315 PF04384 Iron-sulphur cluster assembly D1115_12320 PF00111 2Fe-2S iron-sulfur cluster binding domain D1115_12325 PF00012 Hsp70 protein D1115_12330 PF07743 HSCB C-terminal oligomerisation domain D1115_12330 PF00226 DnaJ domain D1115_12335 PF01521 Iron-sulphur cluster biosynthesis D1115_12340 PF01592 NifU-like N terminal domain D1115_12345 PF00266 Aminotransferase class-V D1115_12350 PF02082 Transcriptional regulator D1115_12355 PF00588 SpoU rRNA Methylase family D1115_12360 PF00459 Inositol monophosphatase family D1115_12365 PF07549 SecD/SecF GG Motif D1115_12365 PF02355 Protein export membrane protein D1115_12370 PF07549 SecD/SecF GG Motif D1115_12370 PF13721 SecD export protein N-terminal TM region D1115_12370 PF02355 Protein export membrane protein D1115_12375 PF02699 Preprotein translocase subunit D1115_12380 PF01702 Queuine tRNA-ribosyltransferase D1115_12385 PF02547 Queuosine biosynthesis protein D1115_12395 PF00571 CBS domain D1115_12400 PF00463 Isocitrate lyase family D1115_12405 PF01274 Malate synthase D1115_12410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1115_12410 PF03466 LysR substrate binding domain D1115_12415 PF00578 AhpC/TSA family D1115_12415 PF10417 C-terminal domain of 1-Cys peroxiredoxin D1115_12420 PF03932 CutC family D1115_12425 PF03976 Polyphosphate kinase 2 (PPK2) D1115_12430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1115_12430 PF03466 LysR substrate binding domain D1115_12445 PF01895 PhoU domain D1115_12450 PF00005 ABC transporter D1115_12455 PF00528 Binding-protein-dependent transport system inner membrane component D1115_12470 PF02541 Ppx/GppA phosphatase family D1115_12475 PF12849 PBP superfamily domain D1115_12480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1115_12480 PF11808 Phosphate regulon sensor protein PhoR D1115_12480 PF00512 His Kinase A (phospho-acceptor) domain D1115_12480 PF00989 PAS fold D1115_12485 PF00072 Response regulator receiver domain D1115_12485 PF00486 Transcriptional regulatory protein, C terminal D1115_12495 PF04381 Putative exonuclease, RdgC D1115_12505 PF00037 4Fe-4S binding domain D1115_12515 PF03411 Penicillin-insensitive murein endopeptidase D1115_12565 PF07724 AAA domain (Cdc48 subfamily) D1115_12565 PF17871 AAA lid domain D1115_12565 PF02861 Clp amino terminal domain, pathogenicity island component D1115_12565 PF10431 C-terminal, D2-small domain, of ClpB protein D1115_12565 PF00004 ATPase family associated with various cellular activities (AAA) D1115_12575 PF00849 RNA pseudouridylate synthase D1115_12575 PF01479 S4 domain D1115_12580 PF13525 Outer membrane lipoprotein D1115_12590 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein D1115_12595 PF00800 Prephenate dehydratase D1115_12595 PF01817 Chorismate mutase type II D1115_12600 PF01931 Protein of unknown function DUF84 D1115_12605 PF01371 Trp repressor protein D1115_12610 PF14718 Soluble lytic murein transglycosylase L domain D1115_12610 PF01464 Transglycosylase SLT domain D1115_12615 PF12848 ABC transporter D1115_12615 PF00005 ABC transporter D1115_12620 PF07238 PilZ domain D1115_12630 PF01817 Chorismate mutase type II D1115_12630 PF02153 Prephenate dehydrogenase D1115_12635 PF00793 DAHP synthetase I family D1115_12640 PF00933 Glycosyl hydrolase family 3 N terminal domain D1115_12645 PF03702 Anhydro-N-acetylmuramic acid kinase D1115_12650 PF01380 SIS domain D1115_12665 PF02554 Carbon starvation protein CstA D1115_12670 PF06580 Histidine kinase D1115_12670 PF07694 5TMR of 5TMR-LYT D1115_12675 PF00072 Response regulator receiver domain D1115_12675 PF04397 LytTr DNA-binding domain D1115_12680 PF02401 LytB protein D1115_12685 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D1115_12690 PF01252 Signal peptidase (SPase) II D1115_12695 PF06827 Zinc finger found in FPG and IleRS D1115_12695 PF08264 Anticodon-binding domain of tRNA D1115_12695 PF00133 tRNA synthetases class I (I, L, M and V) D1115_12700 PF01687 Riboflavin kinase D1115_12700 PF06574 FAD synthetase D1115_12705 PF03023 Lipid II flippase MurJ D1115_12710 PF01649 Ribosomal protein S20 D1115_12715 PF01022 Bacterial regulatory protein, arsR family D1115_12720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1115_12720 PF03466 LysR substrate binding domain D1115_12725 PF02690 Na+/Pi-cotransporter D1115_12730 PF00303 Thymidylate synthase D1115_12735 PF01790 Prolipoprotein diacylglyceryl transferase D1115_12740 PF01925 Sulfite exporter TauE/SafE D1115_12745 PF01590 GAF domain D1115_12745 PF02896 PEP-utilising enzyme, TIM barrel domain D1115_12745 PF00391 PEP-utilising enzyme, mobile domain D1115_12745 PF05524 PEP-utilising enzyme, N-terminal D1115_12750 PF00293 NUDIX domain D1115_12760 PF02976 DNA mismatch repair enzyme MutH D1115_12770 PF00248 Aldo/keto reductase family D1115_12785 PF00072 Response regulator receiver domain D1115_12785 PF02954 Bacterial regulatory protein, Fis family D1115_12785 PF00158 Sigma-54 interaction domain D1115_12790 PF00152 tRNA synthetases class II (D, K and N) D1115_12790 PF01336 OB-fold nucleic acid binding domain D1115_12800 PF02272 DHHA1 domain D1115_12800 PF01368 DHH family D1115_12800 PF17768 RecJ OB domain D1115_12805 PF13098 Thioredoxin-like domain D1115_12805 PF10411 Disulfide bond isomerase protein N-terminus D1115_12810 PF00589 Phage integrase family D1115_12810 PF02899 Phage integrase, N-terminal SAM-like domain D1115_12815 PF00258 Flavodoxin D1115_12820 PF05525 Branched-chain amino acid transport protein D1115_12825 PF05175 Methyltransferase small domain D1115_12830 PF00271 Helicase conserved C-terminal domain D1115_12830 PF00270 DEAD/DEAH box helicase D1115_12835 PF03883 Peroxide stress protein YaaA D1115_12840 PF01235 Sodium:alanine symporter family D1115_12855 PF03167 Uracil DNA glycosylase superfamily D1115_12865 PF01261 Xylose isomerase-like TIM barrel D1115_12870 PF01228 Glycine radical D1115_12875 PF00291 Pyridoxal-phosphate dependent enzyme D1115_12875 PF14821 Threonine synthase N terminus D1115_12880 PF08544 GHMP kinases C terminal D1115_12880 PF00288 GHMP kinases N terminal domain D1115_12885 PF00696 Amino acid kinase family D1115_12885 PF03447 Homoserine dehydrogenase, NAD binding domain D1115_12885 PF01842 ACT domain D1115_12885 PF00742 Homoserine dehydrogenase D1115_12885 PF13840 ACT domain D1115_12895 PF03737 Aldolase/RraA D1115_12920 PF18415 Histidine kinase receptor ArcB trans-membrane domain D1115_12920 PF01627 Hpt domain D1115_12920 PF00989 PAS fold D1115_12920 PF00072 Response regulator receiver domain D1115_12920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1115_12920 PF00512 His Kinase A (phospho-acceptor) domain D1115_12925 PF16199 Radical_SAM C-terminal domain D1115_12925 PF04055 Radical SAM superfamily D1115_12930 PF01493 GXGXG motif D1115_12930 PF01645 Conserved region in glutamate synthase D1115_12930 PF04898 Glutamate synthase central domain D1115_12930 PF00310 Glutamine amidotransferases class-II D1115_12935 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster D1115_12935 PF07992 Pyridine nucleotide-disulphide oxidoreductase D1115_12940 PF01645 Conserved region in glutamate synthase D1115_12940 PF00310 Glutamine amidotransferases class-II D1115_12940 PF01493 GXGXG motif D1115_12940 PF04898 Glutamate synthase central domain D1115_12945 PF07992 Pyridine nucleotide-disulphide oxidoreductase D1115_12945 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster D1115_12955 PF01048 Phosphorylase superfamily D1115_12970 PF03458 UPF0126 domain D1115_12975 PF03466 LysR substrate binding domain D1115_12975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1115_12980 PF01925 Sulfite exporter TauE/SafE D1115_12985 PF02142 MGS-like domain D1115_12985 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain D1115_12985 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain D1115_12990 PF00117 Glutamine amidotransferase class-I D1115_12990 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain D1115_12995 PF01113 Dihydrodipicolinate reductase, N-terminus D1115_12995 PF05173 Dihydrodipicolinate reductase, C-terminus D1115_13000 PF00293 NUDIX domain D1115_13015 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase D1115_13020 PF00091 Tubulin/FtsZ family, GTPase domain D1115_13020 PF12327 FtsZ family, C-terminal domain D1115_13025 PF02491 SHS2 domain inserted in FTSA D1115_13030 PF03799 Cell division protein FtsQ D1115_13030 PF08478 POTRA domain, FtsQ-type D1115_13035 PF08245 Mur ligase middle domain D1115_13035 PF02875 Mur ligase family, glutamate ligase domain D1115_13035 PF01225 Mur ligase family, catalytic domain D1115_13040 PF03033 Glycosyltransferase family 28 N-terminal domain D1115_13040 PF04101 Glycosyltransferase family 28 C-terminal domain D1115_13045 PF01098 Cell cycle protein D1115_13050 PF02875 Mur ligase family, glutamate ligase domain D1115_13050 PF08245 Mur ligase middle domain D1115_13055 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 D1115_13055 PF00953 Glycosyl transferase family 4 D1115_13060 PF08245 Mur ligase middle domain D1115_13060 PF02875 Mur ligase family, glutamate ligase domain D1115_13060 PF01225 Mur ligase family, catalytic domain D1115_13065 PF01225 Mur ligase family, catalytic domain D1115_13065 PF08245 Mur ligase middle domain D1115_13065 PF02875 Mur ligase family, glutamate ligase domain D1115_13070 PF03717 Penicillin-binding Protein dimerisation domain D1115_13070 PF00905 Penicillin binding protein transpeptidase domain D1115_13075 PF04999 Cell division protein FtsL D1115_13080 PF01795 MraW methylase family D1115_13095 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D1115_13100 PF04348 LppC putative lipoprotein D1115_13105 PF02021 Uncharacterised protein family UPF0102 D1115_13110 PF13580 SIS domain D1115_13115 PF04972 BON domain D1115_13120 PF04386 Stringent starvation protein B D1115_13125 PF00043 Glutathione S-transferase, C-terminal domain D1115_13125 PF02798 Glutathione S-transferase, N-terminal domain D1115_13130 PF02167 Cytochrome C1 family D1115_13135 PF00033 Cytochrome b/b6/petB D1115_13135 PF00032 Cytochrome b(C-terminal)/b6/petD D1115_13140 PF00355 Rieske [2Fe-2S] domain D1115_13140 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal D1115_13145 PF00380 Ribosomal protein S9/S16 D1115_13150 PF00572 Ribosomal protein L13 D1115_13160 PF03969 AFG1-like ATPase D1115_13165 PF06295 Protein of unknown function (DUF1043) D1115_13170 PF00595 PDZ domain D1115_13175 PF13180 PDZ domain D1115_13180 PF00521 DNA gyrase/topoisomerase IV, subunit A D1115_13180 PF03989 DNA gyrase C-terminal domain, beta-propeller D1115_13185 PF01751 Toprim domain D1115_13185 PF00204 DNA gyrase B D1115_13185 PF00986 DNA gyrase B subunit, carboxyl terminus D1115_13185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1115_13190 PF05728 Uncharacterised protein family (UPF0227) D1115_13195 PF00149 Calcineurin-like phosphoesterase D1115_13200 PF06853 Protein of unknown function (DUF1249) D1115_13205 PF00293 NUDIX domain D1115_13210 PF02321 Outer membrane efflux protein D1115_13215 PF01467 Cytidylyltransferase-like D1115_13215 PF00294 pfkB family carbohydrate kinase D1115_13220 PF08335 GlnD PII-uridylyltransferase D1115_13220 PF03710 Glutamate-ammonia ligase adenylyltransferase D1115_13225 PF00672 HAMP domain D1115_13225 PF02743 Cache domain D1115_13225 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D1115_13230 PF01928 CYTH domain D1115_13235 PF01865 Protein of unknown function DUF47 D1115_13240 PF01384 Phosphate transporter family D1115_13245 PF08239 Bacterial SH3 domain D1115_13255 PF01471 Putative peptidoglycan binding domain D1115_13255 PF13401 AAA domain D1115_13260 PF01966 HD domain D1115_13260 PF01743 Poly A polymerase head domain D1115_13260 PF12627 Probable RNA and SrmB- binding site of polymerase A D1115_13270 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) D1115_13275 PF02152 Dihydroneopterin aldolase D1115_13280 PF02660 Glycerol-3-phosphate acyltransferase D1115_13285 PF00561 alpha/beta hydrolase fold D1115_13290 PF00814 Glycoprotease family D1115_13295 PF01165 Ribosomal protein S21 D1115_13300 PF09424 Yqey-like protein D1115_13310 PF04545 Sigma-70, region 4 D1115_13310 PF04546 Sigma-70, non-essential region D1115_13310 PF03979 Sigma-70 factor, region 1.1 D1115_13310 PF04539 Sigma-70 region 3 D1115_13310 PF00140 Sigma-70 factor, region 1.2 D1115_13310 PF04542 Sigma-70 region 2 D1115_13330 PF01925 Sulfite exporter TauE/SafE D1115_13345 PF04193 PQ loop repeat D1115_13350 PF00756 Putative esterase D1115_13350 PF08310 LGFP repeat D1115_13360 PF00128 Alpha amylase, catalytic domain D1115_13360 PF02903 Alpha amylase, N-terminal ig-like domain D1115_13360 PF16657 Maltogenic Amylase, C-terminal domain D1115_13365 PF00528 Binding-protein-dependent transport system inner membrane component D1115_13370 PF00528 Binding-protein-dependent transport system inner membrane component D1115_13375 PF13416 Bacterial extracellular solute-binding protein D1115_13385 PF00132 Bacterial transferase hexapeptide (six repeats) D1115_13385 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD D1115_13390 PF17912 MalK OB fold domain D1115_13390 PF00005 ABC transporter D1115_13395 PF16347 Domain of unknown function (DUF4976) D1115_13395 PF00884 Sulfatase D1115_13400 PF04055 Radical SAM superfamily D1115_13400 PF13186 Iron-sulfur cluster-binding domain D1115_13410 PF01380 SIS domain D1115_13415 PF00455 DeoR C terminal sensor domain D1115_13415 PF08220 DeoR-like helix-turn-helix domain D1115_13420 PF00224 Pyruvate kinase, barrel domain D1115_13420 PF02887 Pyruvate kinase, alpha/beta domain D1115_13435 PF10369 Small subunit of acetolactate synthase D1115_13440 PF00205 Thiamine pyrophosphate enzyme, central domain D1115_13440 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D1115_13440 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D1115_13450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1115_13450 PF03466 LysR substrate binding domain D1115_13460 PF01569 PAP2 superfamily D1115_13475 PF00682 HMGL-like D1115_13475 PF08502 LeuA allosteric (dimerisation) domain D1115_13480 PF00180 Isocitrate/isopropylmalate dehydrogenase D1115_13485 PF00330 Aconitase family (aconitate hydratase) D1115_13490 PF00694 Aconitase C-terminal domain D1115_13500 PF00226 DnaJ domain D1115_13500 PF05099 Tellurite resistance protein TerB D1115_13505 PF04453 LPS transport system D D1115_13505 PF03968 OstA-like protein D1115_13510 PF09312 SurA N-terminal domain D1115_13520 PF00398 Ribosomal RNA adenine dimethylase D1115_13525 PF04379 ApaG domain D1115_13530 PF00149 Calcineurin-like phosphoesterase D1115_13535 PF00186 Dihydrofolate reductase D1115_13540 PF12821 Threonine/Serine exporter, ThrE D1115_13545 PF06738 Putative threonine/serine exporter D1115_13550 PF01926 50S ribosome-binding GTPase D1115_13550 PF01018 GTP1/OBG D1115_13555 PF01016 Ribosomal L27 protein D1115_13560 PF00829 Ribosomal prokaryotic L21 protein D1115_13565 PF00348 Polyprenyl synthetase D1115_13575 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain D1115_13575 PF00056 lactate/malate dehydrogenase, NAD binding domain D1115_13580 PF02863 Arginine repressor, C-terminal domain D1115_13580 PF01316 Arginine repressor, DNA binding domain D1115_13590 PF16868 NMT1-like family D1115_13605 PF00005 ABC transporter D1115_13610 PF00528 Binding-protein-dependent transport system inner membrane component D1115_13620 PF02441 Flavoprotein D1115_13625 PF01225 Mur ligase family, catalytic domain D1115_13625 PF02875 Mur ligase family, glutamate ligase domain D1115_13625 PF08245 Mur ligase middle domain D1115_13630 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain D1115_13635 PF00719 Inorganic pyrophosphatase D1115_13640 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like D1115_13645 PF04357 TamB, inner membrane protein subunit of TAM complex D1115_13650 PF07244 Surface antigen variable number repeat D1115_13650 PF17243 POTRA domain TamA domain 1 D1115_13650 PF01103 Surface antigen D1115_13655 PF01625 Peptide methionine sulfoxide reductase D1115_13665 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) D1115_13670 PF10795 Protein of unknown function (DUF2607) D1115_13680 PF00005 ABC transporter D1115_13705 PF03600 Citrate transporter D1115_13705 PF02080 TrkA-C domain D1115_13710 PF00009 Elongation factor Tu GTP binding domain D1115_13715 PF01507 Phosphoadenosine phosphosulfate reductase family D1115_13720 PF10414 Sirohaem synthase dimerisation region D1115_13720 PF14824 Sirohaem biosynthesis protein central D1115_13720 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D1115_13725 PF00149 Calcineurin-like phosphoesterase D1115_13725 PF02872 5'-nucleotidase, C-terminal domain D1115_13735 PF00271 Helicase conserved C-terminal domain D1115_13735 PF00270 DEAD/DEAH box helicase D1115_13735 PF03880 DbpA RNA binding domain D1115_13740 PF13673 Acetyltransferase (GNAT) domain D1115_13750 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D1115_13750 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase D1115_13760 PF01196 Ribosomal protein L17 D1115_13765 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain D1115_13765 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain D1115_13765 PF01000 RNA polymerase Rpb3/RpoA insert domain D1115_13770 PF00163 Ribosomal protein S4/S9 N-terminal domain D1115_13770 PF01479 S4 domain D1115_13775 PF00411 Ribosomal protein S11 D1115_13780 PF00416 Ribosomal protein S13/S18 D1115_13785 PF00444 Ribosomal protein L36 D1115_13790 PF00344 SecY translocase D1115_13795 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A D1115_13800 PF00327 Ribosomal protein L30p/L7e D1115_13805 PF00333 Ribosomal protein S5, N-terminal domain D1115_13805 PF03719 Ribosomal protein S5, C-terminal domain D1115_13810 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast D1115_13815 PF00347 Ribosomal protein L6 D1115_13820 PF00410 Ribosomal protein S8 D1115_13825 PF00253 Ribosomal protein S14p/S29e D1115_13830 PF00673 ribosomal L5P family C-terminus D1115_13830 PF00281 Ribosomal protein L5 D1115_13840 PF00238 Ribosomal protein L14p/L23e D1115_13845 PF00366 Ribosomal protein S17 D1115_13850 PF00831 Ribosomal L29 protein D1115_13855 PF00252 Ribosomal protein L16p/L10e D1115_13860 PF07650 KH domain D1115_13860 PF00189 Ribosomal protein S3, C-terminal domain D1115_13865 PF00237 Ribosomal protein L22p/L17e D1115_13870 PF00203 Ribosomal protein S19 D1115_13875 PF03947 Ribosomal Proteins L2, C-terminal domain D1115_13875 PF00181 Ribosomal Proteins L2, RNA binding domain D1115_13880 PF00276 Ribosomal protein L23 D1115_13885 PF00573 Ribosomal protein L4/L1 family D1115_13895 PF00338 Ribosomal protein S10p/S20e D1115_13900 PF01197 Ribosomal protein L31 D1115_13905 PF00270 DEAD/DEAH box helicase D1115_13905 PF17764 3′ DNA-binding domain (3′BD) D1115_13905 PF18074 Primosomal protein N C-terminal domain D1115_13905 PF18319 PriA DNA helicase Cys-rich region (CRR) domain D1115_13905 PF00271 Helicase conserved C-terminal domain D1115_13910 PF00356 Bacterial regulatory proteins, lacI family D1115_13920 PF00227 Proteasome subunit D1115_13925 PF00004 ATPase family associated with various cellular activities (AAA) D1115_13925 PF07724 AAA domain (Cdc48 subfamily) D1115_13935 PF03737 Aldolase/RraA D1115_13945 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded D1115_13950 PF08220 DeoR-like helix-turn-helix domain D1115_13950 PF00455 DeoR C terminal sensor domain D1115_13975 PF00121 Triosephosphate isomerase D1115_13985 PF01370 NAD dependent epimerase/dehydratase family D1115_13990 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain D1115_13990 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain D1115_13990 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain D1115_13995 PF10996 Beta-Casp domain D1115_13995 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain D1115_13995 PF00753 Metallo-beta-lactamase superfamily D1115_14010 PF02719 Polysaccharide biosynthesis protein D1115_14020 PF01370 NAD dependent epimerase/dehydratase family D1115_14030 PF01238 Phosphomannose isomerase type I D1115_14035 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I D1115_14035 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain D1115_14035 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III D1115_14035 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II D1115_14040 PF00483 Nucleotidyl transferase D1115_14040 PF01050 Mannose-6-phosphate isomerase D1115_14045 PF00293 NUDIX domain D1115_14050 PF01370 NAD dependent epimerase/dehydratase family D1115_14070 PF13439 Glycosyltransferase Family 4 D1115_14085 PF00535 Glycosyl transferase family 2 D1115_14120 PF00534 Glycosyl transferases group 1 D1115_14120 PF13439 Glycosyltransferase Family 4 D1115_14160 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF D1115_14180 PF01370 NAD dependent epimerase/dehydratase family D1115_14195 PF01075 Glycosyltransferase family 9 (heptosyltransferase) D1115_14215 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family D1115_14245 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III D1115_14245 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal D1115_14255 PF05523 WxcM-like, C-terminal D1115_14260 PF00483 Nucleotidyl transferase D1115_14265 PF16363 GDP-mannose 4,6 dehydratase D1115_14275 PF01219 Prokaryotic diacylglycerol kinase D1115_14280 PF01075 Glycosyltransferase family 9 (heptosyltransferase) D1115_14285 PF00535 Glycosyl transferase family 2 D1115_14290 PF00535 Glycosyl transferase family 2 D1115_14295 PF05686 Glycosyl transferase family 90 D1115_14305 PF06827 Zinc finger found in FPG and IleRS D1115_14305 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain D1115_14305 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain D1115_14315 PF00884 Sulfatase D1115_14320 PF00471 Ribosomal protein L33 D1115_14325 PF00830 Ribosomal L28 family D1115_14335 PF04127 DNA / pantothenate metabolism flavoprotein D1115_14335 PF02441 Flavoprotein D1115_14340 PF00440 Bacterial regulatory proteins, tetR family D1115_14355 PF01138 3' exoribonuclease family, domain 1 D1115_14355 PF03725 3' exoribonuclease family, domain 2 D1115_14360 PF03755 YicC-like family, N-terminal region D1115_14360 PF08340 Domain of unknown function (DUF1732) D1115_14370 PF00892 EamA-like transporter family D1115_14385 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D1115_14385 PF00005 ABC transporter D1115_14390 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D1115_14390 PF00005 ABC transporter D1115_14395 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D1115_14400 PF12911 N-terminal TM domain of oligopeptide transport permease C D1115_14400 PF00528 Binding-protein-dependent transport system inner membrane component D1115_14405 PF00528 Binding-protein-dependent transport system inner membrane component D1115_14410 PF07715 TonB-dependent Receptor Plug Domain D1115_14410 PF00593 TonB dependent receptor D1115_14425 PF01618 MotA/TolQ/ExbB proton channel family D1115_14430 PF02472 Biopolymer transport protein ExbD/TolR D1115_14445 PF00625 Guanylate kinase D1115_14450 PF01192 RNA polymerase Rpb6 D1115_14455 PF04607 Region found in RelA / SpoT proteins D1115_14455 PF02824 TGS domain D1115_14455 PF13291 ACT domain D1115_14460 PF00588 SpoU rRNA Methylase family D1115_14460 PF12105 SpoU, rRNA methylase, C-terminal D1115_14465 PF00271 Helicase conserved C-terminal domain D1115_14465 PF17191 RecG wedge domain D1115_14465 PF00270 DEAD/DEAH box helicase D1115_14470 PF00326 Prolyl oligopeptidase family D1115_14470 PF07676 WD40-like Beta Propeller Repeat D1115_14475 PF00860 Permease family D1115_14480 PF00672 HAMP domain D1115_14480 PF00512 His Kinase A (phospho-acceptor) domain D1115_14480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1115_14485 PF00072 Response regulator receiver domain D1115_14485 PF00486 Transcriptional regulatory protein, C terminal D1115_14500 PF17674 HHH domain D1115_14500 PF16921 Tex protein YqgF-like domain D1115_14500 PF09371 Tex-like protein N-terminal domain D1115_14500 PF00575 S1 RNA binding domain D1115_14510 PF00561 alpha/beta hydrolase fold D1115_14515 PF00156 Phosphoribosyl transferase domain D1115_14520 PF01106 NifU-like domain D1115_14520 PF01521 Iron-sulphur cluster biosynthesis D1115_14530 PF00459 Inositol monophosphatase family D1115_14535 PF01203 Type II secretion system (T2SS), protein N D1115_14540 PF04612 Type II secretion system (T2SS), protein M D1115_14545 PF12693 GspL periplasmic domain D1115_14545 PF05134 Type II secretion system (T2SS), protein L D1115_14550 PF03934 Type II secretion system (T2SS), protein K D1115_14555 PF11612 Type II secretion system (T2SS), protein J D1115_14555 PF07963 Prokaryotic N-terminal methylation motif D1115_14570 PF08334 Type II secretion system (T2SS), protein G D1115_14570 PF07963 Prokaryotic N-terminal methylation motif D1115_14575 PF00482 Type II secretion system (T2SS), protein F D1115_14580 PF00437 Type II/IV secretion system protein D1115_14585 PF03958 Bacterial type II/III secretion system short domain D1115_14585 PF00263 Bacterial type II and III secretion system protein D1115_14595 PF01479 S4 domain D1115_14600 PF01430 Hsp33 protein D1115_14605 PF01293 Phosphoenolpyruvate carboxykinase D1115_14615 PF00583 Acetyltransferase (GNAT) family D1115_14615 PF09500 Putative thioesterase (yiiD_Cterm) D1115_14620 PF02580 D-Tyr-tRNA(Tyr) deacylase D1115_14625 PF03631 Virulence factor BrkB D1115_14645 PF00120 Glutamine synthetase, catalytic domain D1115_14645 PF03951 Glutamine synthetase, beta-Grasp domain D1115_14655 PF00989 PAS fold D1115_14655 PF00512 His Kinase A (phospho-acceptor) domain D1115_14655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1115_14660 PF00072 Response regulator receiver domain D1115_14660 PF02954 Bacterial regulatory protein, Fis family D1115_14660 PF00158 Sigma-54 interaction domain D1115_14670 PF00962 Adenosine/AMP deaminase D1115_14675 PF06969 HemN C-terminal domain D1115_14675 PF04055 Radical SAM superfamily D1115_14685 PF04220 Der GTPase activator (YihI) D1115_14700 PF00034 Cytochrome c D1115_14705 PF01926 50S ribosome-binding GTPase D1115_14715 PF01367 5'-3' exonuclease, C-terminal SAM fold D1115_14715 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain D1115_14715 PF00476 DNA polymerase family A D1115_14715 PF01612 3'-5' exonuclease D1115_14730 PF00490 Delta-aminolevulinic acid dehydratase D1115_14735 PF01026 TatD related DNase D1115_14740 PF00902 Sec-independent protein translocase protein (TatC) D1115_14745 PF02416 mttA/Hcf106 family D1115_14750 PF02416 mttA/Hcf106 family D1115_14755 PF03109 ABC1 family D1115_14760 PF02036 SCP-2 sterol transfer family D1115_14765 PF01209 ubiE/COQ5 methyltransferase family D1115_14770 PF02646 RmuC family D1115_14780 PF00563 EAL domain D1115_14780 PF03707 Bacterial signalling protein N terminal repeat D1115_14780 PF00990 Diguanylate cyclase, GGDEF domain D1115_14790 PF10625 Universal stress protein B (UspB) D1115_14795 PF00210 Ferritin-like domain D1115_14805 PF00892 EamA-like transporter family D1115_14815 PF04445 Putative SAM-dependent methyltransferase D1115_14820 PF01037 Lrp/AsnC ligand binding domain D1115_14825 PF01432 Peptidase family M3 D1115_14830 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ D1115_14835 PF07992 Pyridine nucleotide-disulphide oxidoreductase D1115_14835 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D1115_14840 PF01081 KDPG and KHG aldolase D1115_14845 PF02447 GntP family permease D1115_14850 PF01202 Shikimate kinase D1115_14855 PF00920 Dehydratase family D1115_14860 PF00893 Small Multidrug Resistance protein D1115_14865 PF00893 Small Multidrug Resistance protein D1115_14870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1115_14870 PF03466 LysR substrate binding domain D1115_14875 PF00356 Bacterial regulatory proteins, lacI family D1115_14875 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family D1115_14880 PF00069 Protein kinase domain D1115_14910 PF12911 N-terminal TM domain of oligopeptide transport permease C D1115_14910 PF00528 Binding-protein-dependent transport system inner membrane component D1115_14920 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D1115_14925 PF00005 ABC transporter D1115_14925 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D1115_14965 PF13442 Cytochrome C oxidase, cbb3-type, subunit III D1115_14970 PF13361 UvrD-like helicase C-terminal domain D1115_14970 PF00580 UvrD/REP helicase N-terminal domain D1115_14975 PF08359 YsiA-like protein, C-terminal region D1115_14975 PF00440 Bacterial regulatory proteins, tetR family D1115_14980 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D1115_14985 PF00873 AcrB/AcrD/AcrF family D1115_14995 PF04380 Membrane fusogenic activity D1115_15000 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain D1115_15000 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain D1115_15055 PF07369 Protein of unknown function (DUF1488) D1115_15060 PF08501 Shikimate dehydrogenase substrate binding domain D1115_15060 PF18317 Shikimate 5'-dehydrogenase C-terminal domain D1115_15060 PF01488 Shikimate / quinate 5-dehydrogenase D1115_15075 PF02222 ATP-grasp domain D1115_15075 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain D1115_15115 PF02080 TrkA-C domain D1115_15115 PF02254 TrkA-N domain D1115_15130 PF03006 Haemolysin-III related D1115_15145 PF06288 Protein of unknown function (DUF1040) D1115_15175 PF13335 Magnesium chelatase, subunit ChlI C-terminal D1115_15175 PF01078 Magnesium chelatase, subunit ChlI D1115_15180 PF00205 Thiamine pyrophosphate enzyme, central domain D1115_15180 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D1115_15180 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D1115_15190 PF01063 Amino-transferase class IV D1115_15195 PF00920 Dehydratase family D1115_15200 PF00291 Pyridoxal-phosphate dependent enzyme D1115_15200 PF00585 C-terminal regulatory domain of Threonine dehydratase D1115_15210 PF07690 Major Facilitator Superfamily D1115_15215 PF00132 Bacterial transferase hexapeptide (six repeats) D1115_15215 PF12804 MobA-like NTP transferase domain D1115_15220 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain D1115_15220 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain D1115_15225 PF02874 ATP synthase alpha/beta family, beta-barrel domain D1115_15225 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D1115_15230 PF00231 ATP synthase D1115_15235 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D1115_15235 PF00306 ATP synthase alpha/beta chain, C terminal domain D1115_15235 PF02874 ATP synthase alpha/beta family, beta-barrel domain D1115_15240 PF00213 ATP synthase delta (OSCP) subunit D1115_15245 PF00430 ATP synthase B/B' CF(0) D1115_15250 PF00137 ATP synthase subunit C D1115_15260 PF03899 ATP synthase I chain D1115_15265 PF17762 HTH domain found in ParB protein D1115_15265 PF02195 ParB-like nuclease domain D1115_15270 PF13614 AAA domain D1115_15275 PF02527 rRNA small subunit methyltransferase G D1115_15280 PF01134 Glucose inhibited division protein A D1115_15280 PF13932 GidA associated domain D1115_15310 PF01098 Cell cycle protein D1115_15320 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D1115_15325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1115_15325 PF03466 LysR substrate binding domain D1115_15335 PF00005 ABC transporter D1115_15355 PF13492 GAF domain D1115_15355 PF06580 Histidine kinase D1115_15355 PF07694 5TMR of 5TMR-LYT D1115_15355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1115_15360 PF00072 Response regulator receiver domain D1115_15360 PF04397 LytTr DNA-binding domain D1115_15370 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD D1115_15390 PF08534 Redoxin D1115_15395 PF02630 SCO1/SenC D1115_15425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1115_15425 PF03466 LysR substrate binding domain D1115_15435 PF03616 Sodium/glutamate symporter D1115_15445 PF00005 ABC transporter D1115_15450 PF03616 Sodium/glutamate symporter D1115_15465 PF02278 Polysaccharide lyase family 8, super-sandwich domain D1115_15465 PF09092 Lyase, N terminal D1115_15465 PF09093 Lyase, catalytic D1115_15465 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain D1115_15475 PF00884 Sulfatase D1115_15485 PF01116 Fructose-bisphosphate aldolase class-II D1115_15490 PF00294 pfkB family carbohydrate kinase D1115_15495 PF01081 KDPG and KHG aldolase D1115_15525 PF00873 AcrB/AcrD/AcrF family D1115_15530 PF00873 AcrB/AcrD/AcrF family D1115_15540 PF13533 Biotin-lipoyl like D1115_15565 PF09092 Lyase, N terminal D1115_15565 PF09093 Lyase, catalytic D1115_15565 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain D1115_15565 PF02278 Polysaccharide lyase family 8, super-sandwich domain D1115_15570 PF09092 Lyase, N terminal D1115_15570 PF02278 Polysaccharide lyase family 8, super-sandwich domain D1115_15570 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain D1115_15570 PF09093 Lyase, catalytic D1115_15575 PF02278 Polysaccharide lyase family 8, super-sandwich domain D1115_15575 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain D1115_15575 PF09093 Lyase, catalytic D1115_15575 PF09092 Lyase, N terminal D1115_15600 PF00884 Sulfatase D1115_15605 PF00455 DeoR C terminal sensor domain D1115_15605 PF08220 DeoR-like helix-turn-helix domain D1115_15610 PF08013 Tagatose 6 phosphate kinase D1115_15620 PF03830 PTS system sorbose subfamily IIB component D1115_15625 PF03609 PTS system sorbose-specific iic component D1115_15630 PF03613 PTS system mannose/fructose/sorbose family IID component D1115_15635 PF03610 PTS system fructose IIA component D1115_15640 PF01979 Amidohydrolase family D1115_15645 PF04962 KduI/IolB family D1115_15670 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase D1115_15685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1115_15685 PF03466 LysR substrate binding domain D1115_15695 PF06029 AlkA N-terminal domain D1115_15695 PF00730 HhH-GPD superfamily base excision DNA repair protein D1115_15700 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain D1115_15700 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain D1115_15710 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 D1115_15715 PF03600 Citrate transporter D1115_15740 PF06865 Pyrimidine/purine nucleoside phosphorylase D1115_15755 PF08191 LRR adjacent D1115_15755 PF13855 Leucine rich repeat D1115_15755 PF06458 MucBP domain D1115_15755 PF12799 Leucine Rich repeats (2 copies) D1115_15780 PF00722 Glycosyl hydrolases family 16 D1115_15785 PF14310 Fibronectin type III-like domain D1115_15785 PF00933 Glycosyl hydrolase family 3 N terminal domain D1115_15785 PF01915 Glycosyl hydrolase family 3 C-terminal domain D1115_15795 PF00722 Glycosyl hydrolases family 16 D1115_15810 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D1115_15820 PF00528 Binding-protein-dependent transport system inner membrane component D1115_15825 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D1115_15825 PF00005 ABC transporter D1115_15830 PF00005 ABC transporter D1115_15830 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D1115_15840 PF00356 Bacterial regulatory proteins, lacI family D1115_15850 PF00356 Bacterial regulatory proteins, lacI family D1115_15855 PF12833 Helix-turn-helix domain D1115_15860 PF14310 Fibronectin type III-like domain D1115_15860 PF01915 Glycosyl hydrolase family 3 C-terminal domain D1115_15860 PF00933 Glycosyl hydrolase family 3 N terminal domain D1115_15865 PF01554 MatE D1115_15870 PF03480 Bacterial extracellular solute-binding protein, family 7 D1115_15875 PF00849 RNA pseudouridylate synthase D1115_15890 PF17152 Periplasmic sensor domain D1115_15890 PF00990 Diguanylate cyclase, GGDEF domain D1115_15900 PF05656 Protein of unknown function (DUF805) D1115_15905 PF00756 Putative esterase D1115_15910 PF00107 Zinc-binding dehydrogenase D1115_15910 PF08240 Alcohol dehydrogenase GroES-like domain D1115_15915 PF00797 N-acetyltransferase D1115_15920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1115_15920 PF03466 LysR substrate binding domain D1115_15930 PF01810 LysE type translocator D1115_15935 PF01037 Lrp/AsnC ligand binding domain D1115_15945 PF00893 Small Multidrug Resistance protein D1115_15960 PF16868 NMT1-like family D1115_15970 PF13533 Biotin-lipoyl like D1115_15975 PF07690 Major Facilitator Superfamily D1115_15995 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D1115_15995 PF00672 HAMP domain D1115_15995 PF02743 Cache domain D1115_16045 PF03264 NapC/NirT cytochrome c family, N-terminal region D1115_16050 PF18364 Molybdopterin oxidoreductase N-terminal domain D1115_16050 PF01568 Molydopterin dinucleotide binding domain D1115_16050 PF00384 Molybdopterin oxidoreductase D1115_16060 PF02581 Thiamine monophosphate synthase D1115_16065 PF02110 Hydroxyethylthiazole kinase family D1115_16070 PF03070 TENA/THI-4/PQQC family D1115_16075 PF09084 NMT1/THI5 like D1115_16080 PF00528 Binding-protein-dependent transport system inner membrane component D1115_16085 PF00005 ABC transporter D1115_16090 PF08543 Phosphomethylpyrimidine kinase D1115_16095 PF01523 Putative modulator of DNA gyrase D1115_16100 PF01523 Putative modulator of DNA gyrase D1115_16105 PF04013 Putative SAM-dependent RNA methyltransferase D1115_16165 PF00589 Phage integrase family D1115_16165 PF02899 Phage integrase, N-terminal SAM-like domain D1115_16245 PF10928 Protein of unknown function (DUF2810) D1115_16260 PF03009 Glycerophosphoryl diester phosphodiesterase family D1115_16265 PF00486 Transcriptional regulatory protein, C terminal D1115_16265 PF00072 Response regulator receiver domain D1115_16275 PF00593 TonB dependent receptor D1115_16275 PF07715 TonB-dependent Receptor Plug Domain D1115_16285 PF01618 MotA/TolQ/ExbB proton channel family D1115_16290 PF01618 MotA/TolQ/ExbB proton channel family D1115_16295 PF02472 Biopolymer transport protein ExbD/TolR D1115_16315 PF13609 Gram-negative porin D1115_16320 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain D1115_16320 PF00326 Prolyl oligopeptidase family D1115_16325 PF07690 Major Facilitator Superfamily D1115_16330 PF00491 Arginase family D1115_16335 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain D1115_16335 PF17944 Arginine decarboxylase C-terminal helical extension D1115_16335 PF17810 Arginine decarboxylase helical bundle domain D1115_16340 PF00753 Metallo-beta-lactamase superfamily D1115_16345 PF08443 RimK-like ATP-grasp domain D1115_16345 PF18030 RimK PreATP-grasp domain D1115_16350 PF08443 RimK-like ATP-grasp domain D1115_16350 PF18030 RimK PreATP-grasp domain D1115_16355 PF03466 LysR substrate binding domain D1115_16355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1115_16370 PF00232 Glycosyl hydrolase family 1 D1115_16375 PF02743 Cache domain D1115_16375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1115_16375 PF00512 His Kinase A (phospho-acceptor) domain D1115_16380 PF02954 Bacterial regulatory protein, Fis family D1115_16380 PF00072 Response regulator receiver domain D1115_16380 PF00158 Sigma-54 interaction domain D1115_16390 PF05525 Branched-chain amino acid transport protein D1115_16405 PF01266 FAD dependent oxidoreductase D1115_16415 PF03116 NQR2, RnfD, RnfE family D1115_16420 PF01212 Beta-eliminating lyase D1115_16440 PF01773 Na+ dependent nucleoside transporter N-terminus D1115_16440 PF07662 Na+ dependent nucleoside transporter C-terminus D1115_16440 PF07670 Nucleoside recognition D1115_16450 PF03707 Bacterial signalling protein N terminal repeat D1115_16450 PF00990 Diguanylate cyclase, GGDEF domain D1115_16450 PF00563 EAL domain D1115_16470 PF00990 Diguanylate cyclase, GGDEF domain D1115_16475 PF03441 FAD binding domain of DNA photolyase D1115_16475 PF00875 DNA photolyase D1115_16480 PF04244 Deoxyribodipyrimidine photo-lyase-related protein D1115_16495 PF01625 Peptide methionine sulfoxide reductase D1115_16495 PF01641 SelR domain D1115_16500 PF02566 OsmC-like protein D1115_16505 PF14602 Hexapeptide repeat of succinyl-transferase D1115_16505 PF00132 Bacterial transferase hexapeptide (six repeats) D1115_16505 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal D1115_16515 PF13419 Haloacid dehalogenase-like hydrolase D1115_16535 PF12794 Mechanosensitive ion channel inner membrane domain 1 D1115_16535 PF00924 Mechanosensitive ion channel D1115_16535 PF12795 Mechanosensitive ion channel porin domain D1115_16540 PF00246 Zinc carboxypeptidase D1115_16540 PF18027 Cytosolic carboxypeptidase N-terminal domain D1115_16545 PF01389 OmpA-like transmembrane domain D1115_16545 PF00691 OmpA family D1115_16560 PF00854 POT family D1115_16565 PF03315 Serine dehydratase beta chain D1115_16565 PF03313 Serine dehydratase alpha chain D1115_16590 PF01476 LysM domain D1115_16590 PF01464 Transglycosylase SLT domain D1115_16610 PF00460 Flagella basal body rod protein D1115_16615 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D1115_16615 PF00460 Flagella basal body rod protein D1115_16620 PF13860 FlgD Ig-like domain D1115_16620 PF13861 FlgD Tudor-like domain D1115_16620 PF03963 Flagellar hook capping protein - N-terminal region D1115_16625 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D1115_16625 PF00460 Flagella basal body rod protein D1115_16625 PF07559 Flagellar basal body protein FlaE D1115_16635 PF00460 Flagella basal body rod protein D1115_16635 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D1115_16640 PF02107 Flagellar L-ring protein D1115_16645 PF02119 Flagellar P-ring protein D1115_16650 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase D1115_16650 PF10135 Rod binding protein D1115_16655 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D1115_16655 PF00460 Flagella basal body rod protein D1115_16670 PF13472 GDSL-like Lipase/Acylhydrolase family D1115_16670 PF02348 Cytidylyltransferase D1115_16725 PF13677 Membrane MotB of proton-channel complex MotA/MotB D1115_16725 PF00691 OmpA family D1115_16730 PF01618 MotA/TolQ/ExbB proton channel family D1115_16735 PF04542 Sigma-70 region 2 D1115_16735 PF04545 Sigma-70, region 4 D1115_16740 PF03748 Flagellar basal body-associated protein FliL D1115_16760 PF02561 Flagellar protein FliS D1115_16765 PF02465 Flagellar hook-associated protein 2 N-terminus D1115_16765 PF07196 Flagellin hook IN motif D1115_16765 PF07195 Flagellar hook-associated protein 2 C-terminus D1115_16780 PF00700 Bacterial flagellin C-terminal helical region D1115_16780 PF00669 Bacterial flagellin N-terminal helical region D1115_16790 PF00771 FHIPEP family D1115_16795 PF01312 FlhB HrpN YscU SpaS Family D1115_16800 PF01311 Bacterial export proteins, family 1 D1115_16805 PF01313 Bacterial export proteins, family 3 D1115_16810 PF00813 FliP family D1115_16815 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term D1115_16830 PF00158 Sigma-54 interaction domain D1115_16830 PF00072 Response regulator receiver domain D1115_16830 PF02954 Bacterial regulatory protein, Fis family D1115_16835 PF02049 Flagellar hook-basal body complex protein FliE D1115_16840 PF01514 Secretory protein of YscJ/FliF family D1115_16840 PF08345 Flagellar M-ring protein C-terminal D1115_16845 PF14841 FliG middle domain D1115_16845 PF01706 FliG C-terminal domain D1115_16845 PF14842 FliG N-terminal domain D1115_16855 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D1115_16855 PF18269 T3SS EscN ATPase C-terminal domain D1115_16880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1115_16880 PF03466 LysR substrate binding domain D1115_16900 PF00072 Response regulator receiver domain D1115_16900 PF00486 Transcriptional regulatory protein, C terminal D1115_16905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1115_16905 PF00072 Response regulator receiver domain D1115_16905 PF13426 PAS domain D1115_16905 PF00512 His Kinase A (phospho-acceptor) domain D1115_16905 PF08448 PAS fold D1115_16910 PF00266 Aminotransferase class-V D1115_16925 PF00155 Aminotransferase class I and II D1115_16930 PF08240 Alcohol dehydrogenase GroES-like domain D1115_16930 PF00107 Zinc-binding dehydrogenase D1115_16935 PF00589 Phage integrase family D1115_16935 PF12167 Arm DNA-binding domain D1115_16970 PF01609 Transposase DDE domain D1115_16970 PF02281 Transposase Tn5 dimerisation domain D1115_16970 PF14706 Transposase DNA-binding D1115_16975 PF00239 Resolvase, N terminal domain D1115_16975 PF02796 Helix-turn-helix domain of resolvase D1115_16990 PF13358 DDE superfamily endonuclease D1115_17010 PF00455 DeoR C terminal sensor domain D1115_17010 PF08220 DeoR-like helix-turn-helix domain D1115_17015 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D1115_17015 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase D1115_17020 PF07005 Sugar-binding N-terminal domain D1115_17020 PF17042 Nucleotide-binding C-terminal domain D1115_17025 PF00596 Class II Aldolase and Adducin N-terminal domain D1115_17030 PF01261 Xylose isomerase-like TIM barrel D1115_17035 PF02447 GntP family permease D1115_17045 PF11799 impB/mucB/samB family C-terminal domain D1115_17045 PF13438 Domain of unknown function (DUF4113) D1115_17045 PF00817 impB/mucB/samB family D1115_17045 PF11798 IMS family HHH motif D1115_17050 PF00717 Peptidase S24-like D1115_17055 PF04231 Endonuclease I D1115_17060 PF00589 Phage integrase family D1115_17060 PF02899 Phage integrase, N-terminal SAM-like domain D1115_17090 PF02954 Bacterial regulatory protein, Fis family D1115_17115 PF08240 Alcohol dehydrogenase GroES-like domain D1115_17115 PF00107 Zinc-binding dehydrogenase D1115_17120 PF17945 Beta/Gamma crystallin D1115_17120 PF12561 ToxR activated gene A lipoprotein domain D1115_17130 PF00924 Mechanosensitive ion channel D1115_17140 PF01070 FMN-dependent dehydrogenase D1115_17145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1115_17145 PF03466 LysR substrate binding domain D1115_17155 PF13654 AAA domain D1115_17155 PF05362 Lon protease (S16) C-terminal proteolytic domain D1115_17160 PF12729 Four helix bundle sensory module for signal transduction D1115_17160 PF00672 HAMP domain D1115_17160 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D1115_17165 PF07238 PilZ domain D1115_17165 PF12945 Flagellar protein YcgR D1115_17175 PF12838 4Fe-4S dicluster domain D1115_17175 PF12800 4Fe-4S binding domain D1115_17180 PF12801 4Fe-4S binding domain D1115_17180 PF12837 4Fe-4S binding domain D1115_17185 PF01022 Bacterial regulatory protein, arsR family D1115_17205 PF07155 ECF-type riboflavin transporter, S component D1115_17210 PF00529 HlyD membrane-fusion protein of T1SS D1115_17210 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D1115_17215 PF11742 Protein of unknown function (DUF3302) D1115_17240 PF01048 Phosphorylase superfamily D1115_17245 PF08349 Protein of unknown function (DUF1722) D1115_17255 PF00875 DNA photolyase D1115_17255 PF03441 FAD binding domain of DNA photolyase D1115_17260 PF03734 L,D-transpeptidase catalytic domain D1115_17260 PF01476 LysM domain D1115_17260 PF17969 L,D-transpeptidase C-terminal domain D1115_17270 PF00270 DEAD/DEAH box helicase D1115_17270 PF00271 Helicase conserved C-terminal domain D1115_17275 PF12849 PBP superfamily domain D1115_17280 PF00528 Binding-protein-dependent transport system inner membrane component D1115_17285 PF00528 Binding-protein-dependent transport system inner membrane component D1115_17290 PF00005 ABC transporter D1115_17295 PF00990 Diguanylate cyclase, GGDEF domain D1115_17295 PF17151 Periplasmic sensor domain D1115_17320 PF01882 Protein of unknown function DUF58 D1115_17325 PF07726 ATPase family associated with various cellular activities (AAA) D1115_17325 PF17863 AAA lid domain D1115_17330 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D1115_17330 PF02743 Cache domain D1115_17330 PF00672 HAMP domain D1115_17345 PF14602 Hexapeptide repeat of succinyl-transferase D1115_17345 PF12464 Maltose acetyltransferase D1115_17355 PF00563 EAL domain D1115_17355 PF01590 GAF domain D1115_17355 PF00990 Diguanylate cyclase, GGDEF domain D1115_17355 PF00360 Phytochrome region D1115_17370 PF00691 OmpA family D1115_17380 PF02378 Phosphotransferase system, EIIC D1115_17385 PF02378 Phosphotransferase system, EIIC D1115_17390 PF00127 Copper binding proteins, plastocyanin/azurin family D1115_17405 PF07992 Pyridine nucleotide-disulphide oxidoreductase D1115_17410 PF00375 Sodium:dicarboxylate symporter family D1115_17415 PF13419 Haloacid dehalogenase-like hydrolase D1115_17420 PF10282 Lactonase, 7-bladed beta-propeller D1115_17425 PF01161 Phosphatidylethanolamine-binding protein D1115_17435 PF01758 Sodium Bile acid symporter family D1115_17445 PF03222 Tryptophan/tyrosine permease family D1115_17480 PF01476 LysM domain D1115_17480 PF01551 Peptidase family M23 D1115_17480 PF08525 Opacity-associated protein A N-terminal motif D1115_17490 PF00462 Glutaredoxin D1115_17495 PF00892 EamA-like transporter family D1115_17510 PF01557 Fumarylacetoacetate (FAA) hydrolase family D1115_17515 PF01661 Macro domain D1115_17520 PF01810 LysE type translocator D1115_17525 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain D1115_17525 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III D1115_17525 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II D1115_17525 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I D1115_17530 PF02790 Cytochrome C oxidase subunit II, transmembrane domain D1115_17530 PF00116 Cytochrome C oxidase subunit II, periplasmic domain D1115_17535 PF00115 Cytochrome C and Quinol oxidase polypeptide I D1115_17540 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 D1115_17545 PF00510 Cytochrome c oxidase subunit III D1115_17565 PF02628 Cytochrome oxidase assembly protein D1115_17570 PF01040 UbiA prenyltransferase family D1115_17575 PF00691 OmpA family D1115_17575 PF01389 OmpA-like transmembrane domain D1115_17585 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D1115_17585 PF08447 PAS fold D1115_17590 PF02779 Transketolase, pyrimidine binding domain D1115_17590 PF00456 Transketolase, thiamine diphosphate binding domain D1115_17590 PF02780 Transketolase, C-terminal domain D1115_17610 PF08329 Chitinase A, N-terminal domain D1115_17610 PF00704 Glycosyl hydrolases family 18 D1115_17615 PF00581 Rhodanese-like domain D1115_17635 PF00041 Fibronectin type III domain D1115_17635 PF12561 ToxR activated gene A lipoprotein domain D1115_17640 PF00899 ThiF family D1115_17645 PF03454 MoeA C-terminal region (domain IV) D1115_17645 PF03453 MoeA N-terminal region (domain I and II) D1115_17645 PF00994 Probable molybdopterin binding domain D1115_17650 PF01227 GTP cyclohydrolase I D1115_17655 PF01566 Natural resistance-associated macrophage protein D1115_17665 PF00654 Voltage gated chloride channel D1115_17680 PF00248 Aldo/keto reductase family D1115_17685 PF00072 Response regulator receiver domain D1115_17695 PF01256 Carbohydrate kinase D1115_17695 PF03853 YjeF-related protein N-terminus D1115_17700 PF00478 IMP dehydrogenase / GMP reductase domain D1115_17705 PF00583 Acetyltransferase (GNAT) family D1115_17710 PF03358 NADPH-dependent FMN reductase D1115_17715 PF00141 Peroxidase D1115_17720 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D1115_17730 PF01979 Amidohydrolase family D1115_17735 PF00282 Pyridoxal-dependent decarboxylase conserved domain D1115_17745 PF00440 Bacterial regulatory proteins, tetR family D1115_17745 PF13977 BetI-type transcriptional repressor, C-terminal D1115_17750 PF00171 Aldehyde dehydrogenase family D1115_17755 PF05199 GMC oxidoreductase D1115_17755 PF00732 GMC oxidoreductase D1115_17760 PF04069 Substrate binding domain of ABC-type glycine betaine transport system D1115_17765 PF00528 Binding-protein-dependent transport system inner membrane component D1115_17770 PF00005 ABC transporter D1115_17770 PF00571 CBS domain D1115_17775 PF00881 Nitroreductase family D1115_17780 PF01145 SPFH domain / Band 7 family D1115_17795 PF03707 Bacterial signalling protein N terminal repeat D1115_17795 PF00563 EAL domain D1115_17795 PF00990 Diguanylate cyclase, GGDEF domain D1115_17795 PF13188 PAS domain D1115_17820 PF01451 Low molecular weight phosphotyrosine protein phosphatase D1115_17910 PF00132 Bacterial transferase hexapeptide (six repeats) D1115_17925 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain D1115_17925 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain D1115_17925 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain D1115_17935 PF13807 G-rich domain on putative tyrosine kinase D1115_17935 PF02706 Chain length determinant protein D1115_17935 PF13614 AAA domain D1115_17985 PF01177 Asp/Glu/Hydantoin racemase D1115_17990 PF01048 Phosphorylase superfamily D1115_18005 PF07690 Major Facilitator Superfamily D1115_18015 PF00294 pfkB family carbohydrate kinase D1115_18030 PF13411 MerR HTH family regulatory protein D1115_18055 PF12805 FUSC-like inner membrane protein yccS D1115_18065 PF02142 MGS-like domain D1115_18070 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family D1115_18075 PF01627 Hpt domain D1115_18075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1115_18075 PF00512 His Kinase A (phospho-acceptor) domain D1115_18075 PF00672 HAMP domain D1115_18075 PF00072 Response regulator receiver domain D1115_18090 PF00884 Sulfatase D1115_18095 PF00884 Sulfatase D1115_18105 PF07726 ATPase family associated with various cellular activities (AAA) D1115_18105 PF17863 AAA lid domain D1115_18135 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region D1115_18135 PF01872 RibD C-terminal domain D1115_18140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1115_18140 PF03466 LysR substrate binding domain D1115_18145 PF04076 Bacterial OB fold (BOF) protein D1115_18160 PF03781 Sulfatase-modifying factor enzyme 1 D1115_18165 PF13186 Iron-sulfur cluster-binding domain D1115_18165 PF04055 Radical SAM superfamily D1115_18175 PF08774 VRR-NUC domain D1115_18175 PF18081 Fanconi anemia-associated nuclease SAP domain D1115_18190 PF03606 C4-dicarboxylate anaerobic carrier D1115_18210 PF01926 50S ribosome-binding GTPase D1115_18240 PF00082 Subtilase family D1115_18275 PF00881 Nitroreductase family D1115_18280 PF00072 Response regulator receiver domain D1115_18280 PF01584 CheW-like domain D1115_18290 PF07963 Prokaryotic N-terminal methylation motif D1115_18290 PF00114 Pilin (bacterial filament) D1115_18300 PF00892 EamA-like transporter family D1115_18315 PF01569 PAP2 superfamily D1115_18320 PF00893 Small Multidrug Resistance protein D1115_18325 PF00892 EamA-like transporter family D1115_18335 PF00171 Aldehyde dehydrogenase family D1115_18345 PF00724 NADH:flavin oxidoreductase / NADH oxidase family D1115_18350 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D1115_18360 PF12320 Type 5 capsule protein repressor C-terminal domain D1115_18360 PF00149 Calcineurin-like phosphoesterase D1115_18365 PF13476 AAA domain D1115_18375 PF00704 Glycosyl hydrolases family 18 D1115_18395 PF08212 Lipocalin-like domain D1115_18420 PF02525 Flavodoxin-like fold D1115_18475 PF02347 Glycine cleavage system P-protein D1115_18480 PF01597 Glycine cleavage H-protein D1115_18485 PF00464 Serine hydroxymethyltransferase D1115_18495 PF08669 Glycine cleavage T-protein C-terminal barrel domain D1115_18495 PF01571 Aminomethyltransferase folate-binding domain D1115_18505 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D1115_18515 PF00873 AcrB/AcrD/AcrF family D1115_18525 PF02378 Phosphotransferase system, EIIC D1115_18525 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit D1115_18530 PF00294 pfkB family carbohydrate kinase D1115_18535 PF00381 PTS HPr component phosphorylation site D1115_18535 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D1115_18540 PF00356 Bacterial regulatory proteins, lacI family D1115_18540 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family D1115_18555 PF00528 Binding-protein-dependent transport system inner membrane component D1115_18560 PF00497 Bacterial extracellular solute-binding proteins, family 3 D1115_18565 PF00528 Binding-protein-dependent transport system inner membrane component D1115_18570 PF00005 ABC transporter D1115_18575 PF00465 Iron-containing alcohol dehydrogenase D1115_18580 PF12833 Helix-turn-helix domain D1115_18580 PF06719 AraC-type transcriptional regulator N-terminus D1115_18590 PF01268 Formate--tetrahydrofolate ligase D1115_18595 PF00294 pfkB family carbohydrate kinase D1115_18625 PF04336 Acyl carrier protein phosphodiesterase D1115_18630 PF00270 DEAD/DEAH box helicase D1115_18630 PF00271 Helicase conserved C-terminal domain D1115_18645 PF01292 Prokaryotic cytochrome b561 D1115_18655 PF01226 Formate/nitrite transporter D1115_18660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1115_18660 PF03466 LysR substrate binding domain D1115_18665 PF06496 Protein of unknown function (DUF1097) D1115_18670 PF11398 Protein of unknown function (DUF2813) D1115_18675 PF02872 5'-nucleotidase, C-terminal domain D1115_18675 PF00149 Calcineurin-like phosphoesterase D1115_18680 PF03741 Integral membrane protein TerC family D1115_18700 PF12262 Bacterial virulence factor lipase N-terminal D1115_18705 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) D1115_18720 PF03061 Thioesterase superfamily D1115_18730 PF12793 Sugar transport-related sRNA regulator N-term D1115_18730 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D1115_18755 PF00226 DnaJ domain D1115_18755 PF01556 DnaJ C terminal domain D1115_18755 PF00684 DnaJ central domain D1115_18770 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase D1115_18770 PF07055 Enoyl reductase FAD binding domain D1115_18770 PF12241 Trans-2-enoyl-CoA reductase catalytic region D1115_18775 PF13472 GDSL-like Lipase/Acylhydrolase family D1115_18795 PF02626 Carboxyltransferase domain, subdomain A and B D1115_18800 PF02682 Carboxyltransferase domain, subdomain C and D D1115_18805 PF03746 LamB/YcsF family D1115_18810 PF00990 Diguanylate cyclase, GGDEF domain D1115_18810 PF00563 EAL domain D1115_18810 PF13426 PAS domain D1115_18810 PF08447 PAS fold D1115_18810 PF05231 MASE1 D1115_18810 PF08448 PAS fold D1115_18815 PF16363 GDP-mannose 4,6 dehydratase D1115_18825 PF00593 TonB dependent receptor D1115_18825 PF04886 PT repeat D1115_18825 PF07715 TonB-dependent Receptor Plug Domain D1115_18830 PF03466 LysR substrate binding domain D1115_18830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1115_18835 PF00583 Acetyltransferase (GNAT) family D1115_18835 PF13607 Succinyl-CoA ligase like flavodoxin domain D1115_18835 PF13380 CoA binding domain D1115_18845 PF07478 D-ala D-ala ligase C-terminus D1115_18845 PF01820 D-ala D-ala ligase N-terminus D1115_18855 PF01253 Translation initiation factor SUI1 D1115_18865 PF03701 Uncharacterised protein family (UPF0181) D1115_18880 PF00072 Response regulator receiver domain D1115_18880 PF00486 Transcriptional regulatory protein, C terminal D1115_18890 PF02233 NAD(P) transhydrogenase beta subunit D1115_18895 PF01262 Alanine dehydrogenase/PNT, C-terminal domain D1115_18895 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch D1115_18895 PF05222 Alanine dehydrogenase/PNT, N-terminal domain D1115_18910 PF00072 Response regulator receiver domain D1115_18910 PF00990 Diguanylate cyclase, GGDEF domain D1115_18920 PF00360 Phytochrome region D1115_18920 PF00990 Diguanylate cyclase, GGDEF domain D1115_18920 PF00563 EAL domain D1115_18920 PF01590 GAF domain D1115_18930 PF03459 TOBE domain D1115_18930 PF00005 ABC transporter D1115_18935 PF00528 Binding-protein-dependent transport system inner membrane component D1115_18945 PF07685 CobB/CobQ-like glutamine amidotransferase domain D1115_18945 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain D1115_18950 PF04076 Bacterial OB fold (BOF) protein D1115_18965 PF00155 Aminotransferase class I and II D1115_18970 PF12833 Helix-turn-helix domain D1115_18975 PF01554 MatE D1115_18985 PF13597 Anaerobic ribonucleoside-triphosphate reductase D1115_18985 PF03477 ATP cone domain D1115_19000 PF04143 Sulphur transport D1115_19010 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D1115_19010 PF07992 Pyridine nucleotide-disulphide oxidoreductase D1115_19060 PF01594 AI-2E family transporter D1115_19070 PF00529 HlyD membrane-fusion protein of T1SS D1115_19070 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D1115_19085 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal D1115_19085 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III D1115_19090 PF00085 Thioredoxin D1115_19095 PF07690 Major Facilitator Superfamily D1115_19100 PF11756 Nitrous oxide-stimulated promoter D1115_19105 PF13302 Acetyltransferase (GNAT) domain D1115_19125 PF10414 Sirohaem synthase dimerisation region D1115_19125 PF14824 Sirohaem biosynthesis protein central D1115_19125 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D1115_19130 PF01226 Formate/nitrite transporter D1115_19135 PF13806 Rieske-like [2Fe-2S] domain D1115_19140 PF07992 Pyridine nucleotide-disulphide oxidoreductase D1115_19140 PF18267 Rubredoxin NAD+ reductase C-terminal domain D1115_19140 PF04324 BFD-like [2Fe-2S] binding domain D1115_19140 PF01077 Nitrite and sulphite reductase 4Fe-4S domain D1115_19140 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain D1115_19145 PF07694 5TMR of 5TMR-LYT D1115_19145 PF00990 Diguanylate cyclase, GGDEF domain D1115_19195 PF09330 D-lactate dehydrogenase, membrane binding D1115_19195 PF01565 FAD binding domain D1115_19205 PF05762 VWA domain containing CoxE-like protein D1115_19210 PF12592 Protein of unknown function (DUF3763) D1115_19210 PF17868 AAA lid domain D1115_19210 PF07728 AAA domain (dynein-related subfamily) D1115_19220 PF01212 Beta-eliminating lyase D1115_19225 PF00034 Cytochrome c D1115_19230 PF03606 C4-dicarboxylate anaerobic carrier D1115_19285 PF13936 Helix-turn-helix domain D1115_19285 PF00665 Integrase core domain D1115_19340 PF00664 ABC transporter transmembrane region D1115_19340 PF00005 ABC transporter D1115_19375 PF00501 AMP-binding enzyme D1115_19375 PF13193 AMP-binding enzyme C-terminal domain D1115_19385 PF00593 TonB dependent receptor D1115_19385 PF07715 TonB-dependent Receptor Plug Domain D1115_19395 PF00563 EAL domain D1115_19395 PF00990 Diguanylate cyclase, GGDEF domain D1115_19395 PF03707 Bacterial signalling protein N terminal repeat D1115_19405 PF13737 Transposase DDE domain D1115_19410 PF01594 AI-2E family transporter D1115_19450 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain D1115_19450 PF13806 Rieske-like [2Fe-2S] domain D1115_19450 PF04324 BFD-like [2Fe-2S] binding domain D1115_19450 PF01077 Nitrite and sulphite reductase 4Fe-4S domain D1115_19450 PF07992 Pyridine nucleotide-disulphide oxidoreductase D1115_19450 PF18267 Rubredoxin NAD+ reductase C-terminal domain D1115_19455 PF00005 ABC transporter D1115_19460 PF00528 Binding-protein-dependent transport system inner membrane component D1115_19465 PF00005 ABC transporter D1115_19475 PF08376 Nitrate and nitrite sensing D1115_19475 PF03861 ANTAR domain D1115_19480 PF01738 Dienelactone hydrolase family D1115_19485 PF00591 Glycosyl transferase family, a/b domain D1115_19485 PF02885 Glycosyl transferase family, helical bundle domain D1115_19490 PF10414 Sirohaem synthase dimerisation region D1115_19490 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D1115_19490 PF14824 Sirohaem biosynthesis protein central D1115_19495 PF00384 Molybdopterin oxidoreductase D1115_19495 PF01568 Molydopterin dinucleotide binding domain D1115_19495 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D1115_19505 PF03222 Tryptophan/tyrosine permease family D1115_19520 PF00082 Subtilase family D1115_19520 PF01483 Proprotein convertase P-domain D1115_19530 PF00245 Alkaline phosphatase D1115_19535 PF18719 ArlS sensor domain D1115_19535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1115_19535 PF00512 His Kinase A (phospho-acceptor) domain D1115_19540 PF00486 Transcriptional regulatory protein, C terminal D1115_19540 PF00072 Response regulator receiver domain D1115_19560 PF00012 Hsp70 protein D1115_19575 PF00676 Dehydrogenase E1 component D1115_19580 PF02780 Transketolase, C-terminal domain D1115_19580 PF02779 Transketolase, pyrimidine binding domain D1115_19585 PF02817 e3 binding domain D1115_19585 PF00364 Biotin-requiring enzyme D1115_19585 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) D1115_19590 PF00766 Electron transfer flavoprotein FAD-binding domain D1115_19590 PF01012 Electron transfer flavoprotein domain D1115_19595 PF01012 Electron transfer flavoprotein domain D1115_19605 PF02424 ApbE family D1115_19610 PF03358 NADPH-dependent FMN reductase D1115_19610 PF04205 FMN-binding domain D1115_19610 PF00890 FAD binding domain D1115_19615 PF02798 Glutathione S-transferase, N-terminal domain D1115_19615 PF00043 Glutathione S-transferase, C-terminal domain D1115_19620 PF03466 LysR substrate binding domain D1115_19620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1115_19635 PF00528 Binding-protein-dependent transport system inner membrane component D1115_19640 PF00528 Binding-protein-dependent transport system inner membrane component D1115_19645 PF00497 Bacterial extracellular solute-binding proteins, family 3 D1115_19650 PF00005 ABC transporter D1115_19665 PF00724 NADH:flavin oxidoreductase / NADH oxidase family D1115_19665 PF07992 Pyridine nucleotide-disulphide oxidoreductase D1115_19675 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D1115_19675 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase D1115_19680 PF00378 Enoyl-CoA hydratase/isomerase D1115_19685 PF00378 Enoyl-CoA hydratase/isomerase D1115_19690 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D1115_19690 PF02770 Acyl-CoA dehydrogenase, middle domain D1115_19690 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D1115_19700 PF00376 MerR family regulatory protein D1115_19700 PF09278 MerR, DNA binding D1115_19705 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D1115_19705 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D1115_19705 PF02770 Acyl-CoA dehydrogenase, middle domain D1115_19710 PF01039 Carboxyl transferase domain D1115_19715 PF00378 Enoyl-CoA hydratase/isomerase D1115_19720 PF00682 HMGL-like D1115_19730 PF00034 Cytochrome c D1115_19735 PF00115 Cytochrome C and Quinol oxidase polypeptide I D1115_19780 PF01730 UreF D1115_19795 PF00699 Urease beta subunit D1115_19800 PF00547 Urease, gamma subunit D1115_19805 PF01774 UreD urease accessory protein D1115_19810 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D1115_19825 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D1115_19825 PF00005 ABC transporter D1115_19830 PF00005 ABC transporter D1115_19845 PF14760 Rnk N-terminus D1115_19845 PF01272 Transcription elongation factor, GreA/GreB, C-term D1115_19860 PF12833 Helix-turn-helix domain D1115_19870 PF12849 PBP superfamily domain D1115_19915 PF08448 PAS fold D1115_19915 PF00990 Diguanylate cyclase, GGDEF domain D1115_19920 PF00860 Permease family D1115_19925 PF00005 ABC transporter D1115_19945 PF00270 DEAD/DEAH box helicase D1115_19945 PF00271 Helicase conserved C-terminal domain D1115_19965 PF01470 Pyroglutamyl peptidase D1115_19985 PF09849 Uncharacterized protein conserved in bacteria (DUF2076) D1115_20000 PF12843 Putative quorum-sensing-regulated virulence factor D1115_20025 PF01329 Pterin 4 alpha carbinolamine dehydratase D1115_20030 PF00351 Biopterin-dependent aromatic amino acid hydroxylase D1115_20035 PF13193 AMP-binding enzyme C-terminal domain D1115_20035 PF00501 AMP-binding enzyme D1115_20045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1115_20055 PF00892 EamA-like transporter family D1115_20065 PF00465 Iron-containing alcohol dehydrogenase D1115_20070 PF07995 Glucose / Sorbosone dehydrogenase D1115_20080 PF00210 Ferritin-like domain D1115_20090 PF00672 HAMP domain D1115_20090 PF12729 Four helix bundle sensory module for signal transduction D1115_20090 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D1115_20100 PF02687 FtsX-like permease family D1115_20100 PF00005 ABC transporter D1115_20100 PF12704 MacB-like periplasmic core domain D1115_20105 PF12704 MacB-like periplasmic core domain D1115_20105 PF00005 ABC transporter D1115_20105 PF02687 FtsX-like permease family D1115_20120 PF00313 'Cold-shock' DNA-binding domain D1115_20150 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase D1115_20150 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D1115_20175 PF00072 Response regulator receiver domain D1115_20175 PF00196 Bacterial regulatory proteins, luxR family D1115_20180 PF13419 Haloacid dehalogenase-like hydrolase D1115_20185 PF00472 RF-1 domain D1115_20190 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D1115_20190 PF12729 Four helix bundle sensory module for signal transduction D1115_20190 PF00672 HAMP domain D1115_20195 PF00873 AcrB/AcrD/AcrF family D1115_20200 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D1115_20205 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region D1115_20210 PF07687 Peptidase dimerisation domain D1115_20210 PF01546 Peptidase family M20/M25/M40 D1115_20225 PF00072 Response regulator receiver domain D1115_20225 PF00196 Bacterial regulatory proteins, luxR family D1115_20230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1115_20230 PF00672 HAMP domain D1115_20230 PF07730 Histidine kinase D1115_20230 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term D1115_20235 PF13187 4Fe-4S dicluster domain D1115_20235 PF12838 4Fe-4S dicluster domain D1115_20245 PF01568 Molydopterin dinucleotide binding domain D1115_20245 PF00384 Molybdopterin oxidoreductase D1115_20245 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D1115_20250 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) D1115_20255 PF03264 NapC/NirT cytochrome c family, N-terminal region D1115_20265 PF00561 alpha/beta hydrolase fold D1115_20265 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus D1115_20275 PF00108 Thiolase, N-terminal domain D1115_20275 PF02803 Thiolase, C-terminal domain D1115_20280 PF00106 short chain dehydrogenase D1115_20285 PF07549 SecD/SecF GG Motif D1115_20285 PF02355 Protein export membrane protein D1115_20290 PF07549 SecD/SecF GG Motif D1115_20290 PF13721 SecD export protein N-terminal TM region D1115_20290 PF02355 Protein export membrane protein D1115_20325 PF09308 LuxQ, periplasmic D1115_20325 PF00512 His Kinase A (phospho-acceptor) domain D1115_20325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1115_20325 PF00072 Response regulator receiver domain D1115_20335 PF01541 GIY-YIG catalytic domain D1115_20340 PF04337 Protein of unknown function, DUF480 D1115_20350 PF04363 Protein of unknown function (DUF496) D1115_20355 PF01554 MatE D1115_20365 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain D1115_20365 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain D1115_20380 PF03466 LysR substrate binding domain D1115_20380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1115_20390 PF00873 AcrB/AcrD/AcrF family D1115_20415 PF00529 HlyD membrane-fusion protein of T1SS D1115_20415 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D1115_20420 PF03109 ABC1 family D1115_20425 PF00571 CBS domain D1115_20425 PF01769 Divalent cation transporter D1115_20425 PF03448 MgtE intracellular N domain D1115_20430 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin D1115_20435 PF07969 Amidohydrolase family D1115_20450 PF01966 HD domain D1115_20460 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase D1115_20475 PF01323 DSBA-like thioredoxin domain D1115_20490 PF00106 short chain dehydrogenase D1115_20495 PF00486 Transcriptional regulatory protein, C terminal D1115_20495 PF00072 Response regulator receiver domain D1115_20500 PF00512 His Kinase A (phospho-acceptor) domain D1115_20500 PF00672 HAMP domain D1115_20500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1115_20510 PF08019 Phosphoethanolamine transferase EptA/EptB D1115_20510 PF00884 Sulfatase D1115_20525 PF07690 Major Facilitator Superfamily D1115_20540 PF02525 Flavodoxin-like fold D1115_20545 PF00999 Sodium/hydrogen exchanger family D1115_20545 PF02254 TrkA-N domain D1115_20555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1115_20555 PF03466 LysR substrate binding domain D1115_20580 PF00128 Alpha amylase, catalytic domain D1115_20590 PF00072 Response regulator receiver domain D1115_20590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1115_20590 PF09456 RcsC Alpha-Beta-Loop (ABL) D1115_20590 PF00512 His Kinase A (phospho-acceptor) domain D1115_20600 PF01243 Pyridoxamine 5'-phosphate oxidase D1115_20610 PF04055 Radical SAM superfamily D1115_20620 PF01618 MotA/TolQ/ExbB proton channel family D1115_20625 PF02472 Biopolymer transport protein ExbD/TolR D1115_20635 PF01032 FecCD transport family D1115_20640 PF00005 ABC transporter D1115_20680 PF07729 FCD domain D1115_20680 PF00392 Bacterial regulatory proteins, gntR family D1115_20695 PF02540 NAD synthase D1115_20700 PF03476 MOSC N-terminal beta barrel domain D1115_20700 PF00111 2Fe-2S iron-sulfur cluster binding domain D1115_20700 PF03473 MOSC domain D1115_20700 PF03476 MOSC N-terminal beta barrel domain D1115_20700 PF03473 MOSC domain D1115_20700 PF00111 2Fe-2S iron-sulfur cluster binding domain D1115_20705 PF01679 Proteolipid membrane potential modulator D1115_20715 PF01979 Amidohydrolase family D1115_20720 PF05661 Protein of unknown function (DUF808) D1115_20735 PF08240 Alcohol dehydrogenase GroES-like domain D1115_20735 PF00107 Zinc-binding dehydrogenase D1115_20800 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain D1115_20800 PF01464 Transglycosylase SLT domain D1115_20845 PF00528 Binding-protein-dependent transport system inner membrane component D1115_20850 PF00528 Binding-protein-dependent transport system inner membrane component D1115_20850 PF14785 Maltose transport system permease protein MalF P2 domain D1115_20855 PF01547 Bacterial extracellular solute-binding protein D1115_20865 PF08402 TOBE domain D1115_20865 PF00005 ABC transporter D1115_20875 PF00440 Bacterial regulatory proteins, tetR family D1115_20875 PF16925 Tetracyclin repressor-like, C-terminal domain D1115_20880 PF00107 Zinc-binding dehydrogenase D1115_20880 PF16884 N-terminal domain of oxidoreductase D1115_20890 PF06628 Catalase-related immune-responsive D1115_20890 PF00199 Catalase D1115_20895 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D1115_20895 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase D1115_20905 PF03466 LysR substrate binding domain D1115_20905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1115_20915 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit D1115_20925 PF12833 Helix-turn-helix domain D1115_20930 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit D1115_20930 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D1115_20935 PF01238 Phosphomannose isomerase type I D1115_20950 PF01048 Phosphorylase superfamily D1115_20960 PF01773 Na+ dependent nucleoside transporter N-terminus D1115_20960 PF07662 Na+ dependent nucleoside transporter C-terminus D1115_20960 PF07670 Nucleoside recognition D1115_20965 PF02525 Flavodoxin-like fold D1115_20975 PF01979 Amidohydrolase family D1115_20985 PF01979 Amidohydrolase family D1115_20990 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D1115_20990 PF12838 4Fe-4S dicluster domain D1115_20990 PF00384 Molybdopterin oxidoreductase D1115_20990 PF01568 Molydopterin dinucleotide binding domain D1115_20990 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region D1115_21005 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D1115_21010 PF00873 AcrB/AcrD/AcrF family D1115_21035 PF16197 Ketoacyl-synthetase C-terminal extension D1115_21035 PF00109 Beta-ketoacyl synthase, N-terminal domain D1115_21035 PF02801 Beta-ketoacyl synthase, C-terminal domain D1115_21035 PF08240 Alcohol dehydrogenase GroES-like domain D1115_21035 PF08659 KR domain D1115_21035 PF14765 Polyketide synthase dehydratase D1115_21035 PF00550 Phosphopantetheine attachment site D1115_21035 PF00698 Acyl transferase domain D1115_21040 PF00583 Acetyltransferase (GNAT) family D1115_21040 PF13673 Acetyltransferase (GNAT) domain D1115_21050 PF00293 NUDIX domain D1115_21055 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain D1115_21055 PF00326 Prolyl oligopeptidase family D1115_21065 PF00582 Universal stress protein family D1115_21070 PF02357 Transcription termination factor nusG D1115_21080 PF07992 Pyridine nucleotide-disulphide oxidoreductase D1115_21080 PF18113 Rubredoxin binding C-terminal domain D1115_21085 PF00753 Metallo-beta-lactamase superfamily D1115_21085 PF00258 Flavodoxin D1115_21085 PF00301 Rubredoxin D1115_21090 PF00158 Sigma-54 interaction domain D1115_21090 PF01590 GAF domain D1115_21105 PF01734 Patatin-like phospholipase D1115_21110 PF05726 Pirin C-terminal cupin domain D1115_21110 PF02678 Pirin D1115_21115 PF00313 'Cold-shock' DNA-binding domain D1115_21130 PF00462 Glutaredoxin D1115_21130 PF08534 Redoxin D1115_21140 PF07943 Penicillin-binding protein 5, C-terminal domain D1115_21140 PF00768 D-alanyl-D-alanine carboxypeptidase D1115_21145 PF02028 BCCT, betaine/carnitine/choline family transporter D1115_21150 PF02798 Glutathione S-transferase, N-terminal domain D1115_21160 PF01872 RibD C-terminal domain D1115_21180 PF00106 short chain dehydrogenase D1115_21190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1115_21190 PF03466 LysR substrate binding domain D1115_21195 PF12833 Helix-turn-helix domain D1115_21195 PF01497 Periplasmic binding protein D1115_21200 PF00155 Aminotransferase class I and II D1115_21225 PF00271 Helicase conserved C-terminal domain D1115_21225 PF00270 DEAD/DEAH box helicase D1115_21230 PF01965 DJ-1/PfpI family D1115_21245 PF00582 Universal stress protein family D1115_21250 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) D1115_21265 PF03466 LysR substrate binding domain D1115_21265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1115_21275 PF00857 Isochorismatase family D1115_21280 PF01161 Phosphatidylethanolamine-binding protein D1115_21290 PF00012 Hsp70 protein D1115_21300 PF03618 Kinase/pyrophosphorylase D1115_21305 PF00391 PEP-utilising enzyme, mobile domain D1115_21305 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain D1115_21305 PF02896 PEP-utilising enzyme, TIM barrel domain D1115_21315 PF04976 DMSO reductase anchor subunit (DmsC) D1115_21320 PF13247 4Fe-4S dicluster domain D1115_21320 PF12800 4Fe-4S binding domain D1115_21325 PF00384 Molybdopterin oxidoreductase D1115_21325 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D1115_21325 PF01568 Molydopterin dinucleotide binding domain D1115_21330 PF02613 Nitrate reductase delta subunit D1115_21340 PF00196 Bacterial regulatory proteins, luxR family D1115_21345 PF00579 tRNA synthetases class I (W and Y) D1115_21360 PF03616 Sodium/glutamate symporter D1115_21370 PF00703 Glycosyl hydrolases family 2 D1115_21370 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 D1115_21370 PF02837 Glycosyl hydrolases family 2, sugar binding domain D1115_21370 PF02836 Glycosyl hydrolases family 2, TIM barrel domain D1115_21375 PF02028 BCCT, betaine/carnitine/choline family transporter D1115_21405 PF00873 AcrB/AcrD/AcrF family D1115_21410 PF13533 Biotin-lipoyl like D1115_21415 PF13091 PLD-like domain D1115_21450 PF00486 Transcriptional regulatory protein, C terminal D1115_21460 PF00486 Transcriptional regulatory protein, C terminal D1115_21460 PF18500 CadC C-terminal domain 1 D1115_21470 PF00376 MerR family regulatory protein D1115_21470 PF09278 MerR, DNA binding D1115_21480 PF14492 Elongation Factor G, domain II D1115_21480 PF03764 Elongation factor G, domain IV D1115_21480 PF00009 Elongation factor Tu GTP binding domain D1115_21480 PF00679 Elongation factor G C-terminus D1115_21500 PF02001 Protein of unknown function DUF134 D1115_21510 PF00528 Binding-protein-dependent transport system inner membrane component D1115_21515 PF00005 ABC transporter D1115_21515 PF00571 CBS domain D1115_21520 PF17185 NlpE C-terminal OB domain D1115_21520 PF04170 NlpE N-terminal domain D1115_21525 PF03466 LysR substrate binding domain D1115_21525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1115_21545 PF06942 GlpM protein D1115_21555 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain D1115_21555 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family D1115_21570 PF00080 Copper/zinc superoxide dismutase (SODC) D1115_21585 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D1115_21590 PF01641 SelR domain D1115_21590 PF01625 Peptide methionine sulfoxide reductase D1115_21605 PF00581 Rhodanese-like domain D1115_21610 PF03466 LysR substrate binding domain D1115_21610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1115_21630 PF09905 DNA-binding protein VF530 D1115_21635 PF12848 ABC transporter D1115_21635 PF00005 ABC transporter D1115_21660 PF13533 Biotin-lipoyl like D1115_21670 PF01594 AI-2E family transporter D1115_21675 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) D1115_21685 PF00970 Oxidoreductase FAD-binding domain D1115_21685 PF00175 Oxidoreductase NAD-binding domain D1115_21700 PF09905 DNA-binding protein VF530 D1115_21705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1115_21705 PF03466 LysR substrate binding domain D1115_21715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1115_21715 PF03466 LysR substrate binding domain D1115_21725 PF12706 Beta-lactamase superfamily domain D1115_21740 PF00768 D-alanyl-D-alanine carboxypeptidase D1115_21740 PF07943 Penicillin-binding protein 5, C-terminal domain D1115_21745 PF00561 alpha/beta hydrolase fold D1115_21755 PF02469 Fasciclin domain D1115_21765 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading D1115_21765 PF18416 N-acetylglucosamine binding protein domain 2 D1115_21780 PF00672 HAMP domain D1115_21780 PF17200 Single Cache domain 2 D1115_21780 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D1115_21785 PF01734 Patatin-like phospholipase D1115_21790 PF01914 MarC family integral membrane protein D1115_21795 PF05958 tRNA (Uracil-5-)-methyltransferase D1115_21800 PF00881 Nitroreductase family D1115_21810 PF08803 Putative mono-oxygenase ydhR D1115_21840 PF00375 Sodium:dicarboxylate symporter family D1115_21845 PF06803 Protein of unknown function (DUF1232) D1115_21850 PF07687 Peptidase dimerisation domain D1115_21850 PF01546 Peptidase family M20/M25/M40 D1115_21855 PF07670 Nucleoside recognition D1115_21860 PF07670 Nucleoside recognition D1115_21865 PF00128 Alpha amylase, catalytic domain D1115_21870 PF00912 Transglycosylase D1115_21875 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) D1115_21875 PF02806 Alpha amylase, C-terminal all-beta domain D1115_21875 PF00128 Alpha amylase, catalytic domain D1115_21880 PF02446 4-alpha-glucanotransferase D1115_21885 PF00343 Carbohydrate phosphorylase D1115_21920 PF00367 phosphotransferase system, EIIB D1115_21920 PF02378 Phosphotransferase system, EIIC D1115_21925 PF03193 RsgA GTPase D1115_21930 PF00375 Sodium:dicarboxylate symporter family D1115_21935 PF08543 Phosphomethylpyrimidine kinase D1115_21945 PF13520 Amino acid permease D1115_21950 PF01276 Orn/Lys/Arg decarboxylase, major domain D1115_21950 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain D1115_21950 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain D1115_21965 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) D1115_21965 PF11852 Domain of unknown function (DUF3372) D1115_21965 PF17967 Pullulanase N2 domain D1115_21965 PF03714 Bacterial pullanase-associated domain D1115_21965 PF18494 Pullulanase Ins domain D1115_21970 PF02903 Alpha amylase, N-terminal ig-like domain D1115_21970 PF00128 Alpha amylase, catalytic domain D1115_21985 PF02264 LamB porin D1115_21990 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) D1115_21990 PF00128 Alpha amylase, catalytic domain D1115_21995 PF17158 Membrane-associated sensor, integral membrane domain D1115_21995 PF00990 Diguanylate cyclase, GGDEF domain D1115_22000 PF00239 Resolvase, N terminal domain D1115_22000 PF02796 Helix-turn-helix domain of resolvase D1115_22010 PF00892 EamA-like transporter family D1115_22015 PF07715 TonB-dependent Receptor Plug Domain D1115_22015 PF00593 TonB dependent receptor D1115_22020 PF03466 LysR substrate binding domain D1115_22020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1115_22025 PF01497 Periplasmic binding protein D1115_22030 PF01032 FecCD transport family D1115_22035 PF01032 FecCD transport family D1115_22040 PF00005 ABC transporter D1115_22045 PF00440 Bacterial regulatory proteins, tetR family D1115_22045 PF08360 QacR-like protein, C-terminal region D1115_22055 PF13533 Biotin-lipoyl like D1115_22075 PF03466 LysR substrate binding domain D1115_22075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1115_22080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1115_22080 PF03466 LysR substrate binding domain D1115_22085 PF00934 PE family D1115_22085 PF07859 alpha/beta hydrolase fold D1115_22110 PF00005 ABC transporter D1115_22140 PF10417 C-terminal domain of 1-Cys peroxiredoxin D1115_22140 PF00578 AhpC/TSA family D1115_22145 PF07992 Pyridine nucleotide-disulphide oxidoreductase D1115_22145 PF13192 Thioredoxin domain D1115_22150 PF00313 'Cold-shock' DNA-binding domain D1115_22155 PF00202 Aminotransferase class-III D1115_22160 PF01037 Lrp/AsnC ligand binding domain D1115_22165 PF00557 Metallopeptidase family M24 D1115_22165 PF01321 Creatinase/Prolidase N-terminal domain D1115_22185 PF16403 Domain of unknown function (DUF5011) D1115_22190 PF12833 Helix-turn-helix domain D1115_22195 PF06441 Epoxide hydrolase N terminus D1115_22200 PF06441 Epoxide hydrolase N terminus D1115_22205 PF00270 DEAD/DEAH box helicase D1115_22205 PF00271 Helicase conserved C-terminal domain D1115_22220 PF03466 LysR substrate binding domain D1115_22220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1115_22225 PF03786 D-mannonate dehydratase (UxuA) D1115_22230 PF01232 Mannitol dehydrogenase Rossmann domain D1115_22230 PF08125 Mannitol dehydrogenase C-terminal domain D1115_22235 PF02614 Glucuronate isomerase D1115_22240 PF00294 pfkB family carbohydrate kinase D1115_22245 PF01081 KDPG and KHG aldolase D1115_22265 PF02836 Glycosyl hydrolases family 2, TIM barrel domain D1115_22265 PF02837 Glycosyl hydrolases family 2, sugar binding domain D1115_22265 PF00703 Glycosyl hydrolases family 2 D1115_22275 PF07729 FCD domain D1115_22275 PF00392 Bacterial regulatory proteins, gntR family D1115_22280 PF03573 outer membrane porin, OprD family D1115_22305 PF01037 Lrp/AsnC ligand binding domain D1115_22330 PF00474 Sodium:solute symporter family D1115_22340 PF00171 Aldehyde dehydrogenase family D1115_22340 PF01619 Proline dehydrogenase D1115_22340 PF14850 DNA-binding domain of Proline dehydrogenase D1115_22340 PF18327 Proline utilization A proline dehydrogenase N-terminal domain D1115_22345 PF12833 Helix-turn-helix domain D1115_22355 PF01243 Pyridoxamine 5'-phosphate oxidase D1115_22355 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region D1115_22360 PF00512 His Kinase A (phospho-acceptor) domain D1115_22360 PF02743 Cache domain D1115_22360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1115_22365 PF00072 Response regulator receiver domain D1115_22365 PF00158 Sigma-54 interaction domain D1115_22365 PF02954 Bacterial regulatory protein, Fis family D1115_22370 PF00529 HlyD membrane-fusion protein of T1SS D1115_22400 PF00132 Bacterial transferase hexapeptide (six repeats) D1115_22410 PF05127 Helicase D1115_22410 PF13718 GNAT acetyltransferase 2 D1115_22415 PF02195 ParB-like nuclease domain D1115_22415 PF08775 ParB family D1115_22420 PF13614 AAA domain D1115_22420 PF18607 ParA helix turn helix domain D1115_22425 PF13614 AAA domain D1115_22440 PF00682 HMGL-like D1115_22440 PF07836 DmpG-like communication domain D1115_22450 PF01557 Fumarylacetoacetate (FAA) hydrolase family D1115_22455 PF01613 Flavin reductase like domain D1115_22460 PF07044 Protein of unknown function (DUF1329) D1115_22495 PF12697 Alpha/beta hydrolase family D1115_22555 PF00072 Response regulator receiver domain D1115_22565 PF13244 Domain of unknown function (DUF4040) D1115_22565 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus D1115_22565 PF00361 Proton-conducting membrane transporter D1115_22595 PF03334 Na+/H+ antiporter subunit D1115_22625 PF00528 Binding-protein-dependent transport system inner membrane component D1115_22630 PF07702 UTRA domain D1115_22630 PF00392 Bacterial regulatory proteins, gntR family D1115_22660 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D1115_22665 PF01144 Coenzyme A transferase D1115_22670 PF01144 Coenzyme A transferase D1115_22675 PF00378 Enoyl-CoA hydratase/isomerase D1115_22680 PF03060 Nitronate monooxygenase D1115_22685 PF00378 Enoyl-CoA hydratase/isomerase D1115_22690 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D1115_22690 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D1115_22690 PF02770 Acyl-CoA dehydrogenase, middle domain D1115_22695 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D1115_22695 PF02770 Acyl-CoA dehydrogenase, middle domain D1115_22695 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D1115_22700 PF02803 Thiolase, C-terminal domain D1115_22700 PF00108 Thiolase, N-terminal domain D1115_22705 PF00106 short chain dehydrogenase D1115_22710 PF01425 Amidase D1115_22715 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system D1115_22720 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system D1115_22725 PF02810 SEC-C motif D1115_22725 PF07517 SecA DEAD-like domain D1115_22725 PF01043 SecA preprotein cross-linking domain D1115_22725 PF07516 SecA Wing and Scaffold domain D1115_22760 PF08028 Acyl-CoA dehydrogenase, C-terminal domain D1115_22760 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D1115_22765 PF00970 Oxidoreductase FAD-binding domain D1115_22765 PF00175 Oxidoreductase NAD-binding domain D1115_22765 PF00111 2Fe-2S iron-sulfur cluster binding domain D1115_22775 PF01012 Electron transfer flavoprotein domain D1115_22780 PF00766 Electron transfer flavoprotein FAD-binding domain D1115_22780 PF01012 Electron transfer flavoprotein domain D1115_22790 PF00378 Enoyl-CoA hydratase/isomerase D1115_22820 PF02770 Acyl-CoA dehydrogenase, middle domain D1115_22820 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D1115_22820 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D1115_22825 PF02770 Acyl-CoA dehydrogenase, middle domain D1115_22825 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D1115_22825 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D1115_22845 PF02080 TrkA-C domain D1115_22845 PF03600 Citrate transporter D1115_22850 PF00009 Elongation factor Tu GTP binding domain D1115_22855 PF01507 Phosphoadenosine phosphosulfate reductase family D1115_22860 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain D1115_22860 PF00391 PEP-utilising enzyme, mobile domain D1115_22865 PF07722 Peptidase C26 D1115_22880 PF11490 DNA polymerase III polC-type N-terminus II D1115_22880 PF07733 Bacterial DNA polymerase III alpha NTPase domain D1115_22880 PF17657 Bacterial DNA polymerase III alpha subunit finger domain D1115_22880 PF14579 Helix-hairpin-helix motif D1115_22880 PF02811 PHP domain D1115_22880 PF00929 Exonuclease D1115_22895 PF00534 Glycosyl transferases group 1 D1115_22895 PF09318 Glycosyl transferase 1 domain A D1115_22900 PF13439 Glycosyltransferase Family 4 D1115_22900 PF00534 Glycosyl transferases group 1 D1115_22905 PF13439 Glycosyltransferase Family 4 D1115_22905 PF00534 Glycosyl transferases group 1 D1115_22910 PF13537 Glutamine amidotransferase domain D1115_22910 PF00733 Asparagine synthase D1115_22950 PF13807 G-rich domain on putative tyrosine kinase D1115_22950 PF02706 Chain length determinant protein D1115_22950 PF13614 AAA domain D1115_22990 PF01040 UbiA prenyltransferase family D1115_23000 PF00483 Nucleotidyl transferase D1115_23005 PF13580 SIS domain D1115_23010 PF08544 GHMP kinases C terminal D1115_23010 PF00288 GHMP kinases N terminal domain D1115_23020 PF13439 Glycosyltransferase Family 4 D1115_23020 PF00534 Glycosyl transferases group 1 D1115_23035 PF02899 Phage integrase, N-terminal SAM-like domain D1115_23035 PF00589 Phage integrase family D1115_23050 PF00158 Sigma-54 interaction domain D1115_23050 PF00072 Response regulator receiver domain D1115_23050 PF02954 Bacterial regulatory protein, Fis family D1115_23055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1115_23055 PF00512 His Kinase A (phospho-acceptor) domain D1115_23090 PF00535 Glycosyl transferase family 2 D1115_23100 PF00535 Glycosyl transferase family 2 D1115_23100 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 D1115_23130 PF01451 Low molecular weight phosphotyrosine protein phosphatase D1115_23135 PF14667 Polysaccharide biosynthesis C-terminal domain D1115_23160 PF13333 Integrase core domain D1115_23160 PF13276 HTH-like domain D1115_23160 PF00665 Integrase core domain D1115_23165 PF00665 Integrase core domain D1115_23165 PF13333 Integrase core domain D1115_23165 PF13276 HTH-like domain D1115_23175 PF08448 PAS fold D1115_23175 PF00990 Diguanylate cyclase, GGDEF domain D1115_23185 PF00378 Enoyl-CoA hydratase/isomerase D1115_23190 PF00108 Thiolase, N-terminal domain D1115_23190 PF02803 Thiolase, C-terminal domain D1115_23205 PF13402 Peptidase M60, enhancin and enhancin-like D1115_23205 PF18650 Immunomodulating metalloprotease N-terminal domain D1115_23205 PF18642 Immunomodulating metalloprotease helical domain D1115_23225 PF00724 NADH:flavin oxidoreductase / NADH oxidase family D1115_23235 PF00501 AMP-binding enzyme D1115_23235 PF13193 AMP-binding enzyme C-terminal domain D1115_23250 PF16123 Hydroxyacylglutathione hydrolase C-terminus D1115_23250 PF00753 Metallo-beta-lactamase superfamily D1115_23255 PF07690 Major Facilitator Superfamily