locus-tag class description Vag1382_00010 PF11638 DnaA N-terminal domain Vag1382_00010 PF08299 Bacterial dnaA protein helix-turn-helix Vag1382_00010 PF00308 Bacterial dnaA protein Vag1382_00020 PF02768 DNA polymerase III beta subunit, C-terminal domain Vag1382_00020 PF00712 DNA polymerase III beta subunit, N-terminal domain Vag1382_00020 PF02767 DNA polymerase III beta subunit, central domain Vag1382_00030 PF02463 RecF/RecN/SMC N terminal domain Vag1382_00040 PF01751 Toprim domain Vag1382_00040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vag1382_00040 PF00204 DNA gyrase B Vag1382_00040 PF18053 DNA gyrase B subunit insert domain Vag1382_00040 PF00986 DNA gyrase B subunit, carboxyl terminus Vag1382_00070 PF00011 Hsp20/alpha crystallin family Vag1382_00080 PF00155 Aminotransferase class I and II Vag1382_00090 PF00128 Alpha amylase, catalytic domain Vag1382_00100 PF05746 DALR anticodon binding domain Vag1382_00100 PF02092 Glycyl-tRNA synthetase beta subunit Vag1382_00110 PF02091 Glycyl-tRNA synthetase alpha subunit Vag1382_00120 PF01169 Uncharacterized protein family UPF0016 Vag1382_00140 PF01206 Sulfurtransferase TusA Vag1382_00160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vag1382_00160 PF03466 LysR substrate binding domain Vag1382_00170 PF00107 Zinc-binding dehydrogenase Vag1382_00170 PF08240 Alcohol dehydrogenase GroES-like domain Vag1382_00180 PF00108 Thiolase, N-terminal domain Vag1382_00180 PF02803 Thiolase, C-terminal domain Vag1382_00190 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Vag1382_00190 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Vag1382_00190 PF00378 Enoyl-CoA hydratase/isomerase Vag1382_00200 PF01205 Uncharacterized protein family UPF0029 Vag1382_00200 PF09186 Domain of unknown function (DUF1949) Vag1382_00210 PF02386 Cation transport protein Vag1382_00220 PF12724 Flavodoxin domain Vag1382_00230 PF03466 LysR substrate binding domain Vag1382_00230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vag1382_00240 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain Vag1382_00240 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain Vag1382_00250 PF04380 Membrane fusogenic activity Vag1382_00260 PF00873 AcrB/AcrD/AcrF family Vag1382_00270 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Vag1382_00280 PF00440 Bacterial regulatory proteins, tetR family Vag1382_00280 PF16295 Tetracyclin repressor-like, C-terminal domain Vag1382_00290 PF00580 UvrD/REP helicase N-terminal domain Vag1382_00290 PF13361 UvrD-like helicase C-terminal domain Vag1382_00300 PF13442 Cytochrome C oxidase, cbb3-type, subunit III Vag1382_00320 PF00005 ABC transporter Vag1382_00320 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Vag1382_00330 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Vag1382_00350 PF12911 N-terminal TM domain of oligopeptide transport permease C Vag1382_00350 PF00528 Binding-protein-dependent transport system inner membrane component Vag1382_00420 PF00356 Bacterial regulatory proteins, lacI family Vag1382_00420 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family Vag1382_00430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vag1382_00430 PF03466 LysR substrate binding domain Vag1382_00440 PF00893 Small Multidrug Resistance protein Vag1382_00450 PF00893 Small Multidrug Resistance protein Vag1382_00460 PF00920 Dehydratase family Vag1382_00470 PF01202 Shikimate kinase Vag1382_00480 PF02447 GntP family permease Vag1382_00490 PF01081 KDPG and KHG aldolase Vag1382_00500 PF01048 Phosphorylase superfamily Vag1382_00510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vag1382_00510 PF03466 LysR substrate binding domain Vag1382_00520 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Vag1382_00520 PF07992 Pyridine nucleotide-disulphide oxidoreductase Vag1382_00530 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ Vag1382_00540 PF01432 Peptidase family M3 Vag1382_00550 PF01037 Lrp/AsnC ligand binding domain Vag1382_00560 PF00990 Diguanylate cyclase, GGDEF domain Vag1382_00560 PF00563 EAL domain Vag1382_00560 PF08448 PAS fold Vag1382_00570 PF04445 Putative SAM-dependent methyltransferase Vag1382_00590 PF00892 EamA-like transporter family Vag1382_00600 PF00582 Universal stress protein family Vag1382_00610 PF00210 Ferritin-like domain Vag1382_00620 PF10625 Universal stress protein B (UspB) Vag1382_00640 PF00072 Response regulator receiver domain Vag1382_00640 PF00158 Sigma-54 interaction domain Vag1382_00640 PF02954 Bacterial regulatory protein, Fis family Vag1382_00690 PF00781 Diacylglycerol kinase catalytic domain Vag1382_00750 PF01594 AI-2E family transporter Vag1382_00760 PF00563 EAL domain Vag1382_00760 PF03707 Bacterial signalling protein N terminal repeat Vag1382_00760 PF00990 Diguanylate cyclase, GGDEF domain Vag1382_00780 PF02646 RmuC family Vag1382_00790 PF01209 ubiE/COQ5 methyltransferase family Vag1382_00800 PF02036 SCP-2 sterol transfer family Vag1382_00810 PF03109 ABC1 family Vag1382_00820 PF02416 mttA/Hcf106 family Vag1382_00830 PF02416 mttA/Hcf106 family Vag1382_00840 PF00902 Sec-independent protein translocase protein (TatC) Vag1382_00850 PF01026 TatD related DNase Vag1382_00860 PF00490 Delta-aminolevulinic acid dehydratase Vag1382_00870 PF00583 Acetyltransferase (GNAT) family Vag1382_00880 PF01367 5'-3' exonuclease, C-terminal SAM fold Vag1382_00880 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain Vag1382_00880 PF00476 DNA polymerase family A Vag1382_00880 PF01612 3'-5' exonuclease Vag1382_00890 PF01926 50S ribosome-binding GTPase Vag1382_00900 PF00034 Cytochrome c Vag1382_00920 PF04220 Der GTPase activator (YihI) Vag1382_00930 PF10675 Protein of unknown function (DUF2489) Vag1382_00940 PF04055 Radical SAM superfamily Vag1382_00940 PF06969 HemN C-terminal domain Vag1382_00950 PF00962 Adenosine/AMP deaminase Vag1382_00960 PF03707 Bacterial signalling protein N terminal repeat Vag1382_00960 PF00990 Diguanylate cyclase, GGDEF domain Vag1382_00960 PF00563 EAL domain Vag1382_00970 PF02954 Bacterial regulatory protein, Fis family Vag1382_00970 PF00072 Response regulator receiver domain Vag1382_00970 PF00158 Sigma-54 interaction domain Vag1382_00980 PF00989 PAS fold Vag1382_00980 PF00512 His Kinase A (phospho-acceptor) domain Vag1382_00980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vag1382_01000 PF03951 Glutamine synthetase, beta-Grasp domain Vag1382_01000 PF00120 Glutamine synthetase, catalytic domain Vag1382_01040 PF03631 Virulence factor BrkB Vag1382_01050 PF02580 D-Tyr-tRNA(Tyr) deacylase Vag1382_01060 PF09500 Putative thioesterase (yiiD_Cterm) Vag1382_01060 PF00583 Acetyltransferase (GNAT) family Vag1382_01080 PF01293 Phosphoenolpyruvate carboxykinase Vag1382_01090 PF01430 Hsp33 protein Vag1382_01100 PF01479 S4 domain Vag1382_01110 PF11356 Type II secretion system protein C Vag1382_01120 PF03958 Bacterial type II/III secretion system short domain Vag1382_01120 PF00263 Bacterial type II and III secretion system protein Vag1382_01130 PF00437 Type II/IV secretion system protein Vag1382_01140 PF00482 Type II secretion system (T2SS), protein F Vag1382_01150 PF08334 Type II secretion system (T2SS), protein G Vag1382_01150 PF07963 Prokaryotic N-terminal methylation motif Vag1382_01160 PF12019 Type II transport protein GspH Vag1382_01170 PF07963 Prokaryotic N-terminal methylation motif Vag1382_01170 PF02501 Type II secretion system (T2SS), protein I Vag1382_01180 PF07963 Prokaryotic N-terminal methylation motif Vag1382_01180 PF11612 Type II secretion system (T2SS), protein J Vag1382_01190 PF03934 Type II secretion system (T2SS), protein K Vag1382_01200 PF12693 GspL periplasmic domain Vag1382_01200 PF05134 Type II secretion system (T2SS), protein L Vag1382_01210 PF04612 Type II secretion system (T2SS), protein M Vag1382_01220 PF01203 Type II secretion system (T2SS), protein N Vag1382_01230 PF00459 Inositol monophosphatase family Vag1382_01240 PF00293 NUDIX domain Vag1382_01250 PF01106 NifU-like domain Vag1382_01250 PF01521 Iron-sulphur cluster biosynthesis Vag1382_01260 PF00156 Phosphoribosyl transferase domain Vag1382_01270 PF00561 alpha/beta hydrolase fold Vag1382_01290 PF09371 Tex-like protein N-terminal domain Vag1382_01290 PF16921 Tex protein YqgF-like domain Vag1382_01290 PF00575 S1 RNA binding domain Vag1382_01290 PF17674 HHH domain Vag1382_01310 PF01272 Transcription elongation factor, GreA/GreB, C-term Vag1382_01310 PF03449 Transcription elongation factor, N-terminal Vag1382_01330 PF00072 Response regulator receiver domain Vag1382_01330 PF00486 Transcriptional regulatory protein, C terminal Vag1382_01340 PF00512 His Kinase A (phospho-acceptor) domain Vag1382_01340 PF00672 HAMP domain Vag1382_01340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vag1382_01350 PF00860 Permease family Vag1382_01360 PF17191 RecG wedge domain Vag1382_01360 PF00270 DEAD/DEAH box helicase Vag1382_01360 PF00271 Helicase conserved C-terminal domain Vag1382_01370 PF12105 SpoU, rRNA methylase, C-terminal Vag1382_01370 PF00588 SpoU rRNA Methylase family Vag1382_01380 PF02824 TGS domain Vag1382_01380 PF04607 Region found in RelA / SpoT proteins Vag1382_01380 PF13291 ACT domain Vag1382_01390 PF01192 RNA polymerase Rpb6 Vag1382_01400 PF00625 Guanylate kinase Vag1382_01430 PF02472 Biopolymer transport protein ExbD/TolR Vag1382_01440 PF01618 MotA/TolQ/ExbB proton channel family Vag1382_01470 PF00593 TonB dependent receptor Vag1382_01470 PF07715 TonB-dependent Receptor Plug Domain Vag1382_01480 PF00528 Binding-protein-dependent transport system inner membrane component Vag1382_01490 PF12911 N-terminal TM domain of oligopeptide transport permease C Vag1382_01490 PF00528 Binding-protein-dependent transport system inner membrane component Vag1382_01500 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Vag1382_01510 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Vag1382_01510 PF00005 ABC transporter Vag1382_01520 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Vag1382_01520 PF00005 ABC transporter Vag1382_01540 PF03755 YicC-like family, N-terminal region Vag1382_01540 PF08340 Domain of unknown function (DUF1732) Vag1382_01550 PF01138 3' exoribonuclease family, domain 1 Vag1382_01550 PF03725 3' exoribonuclease family, domain 2 Vag1382_01570 PF03279 Bacterial lipid A biosynthesis acyltransferase Vag1382_01580 PF00440 Bacterial regulatory proteins, tetR family Vag1382_01590 PF04127 DNA / pantothenate metabolism flavoprotein Vag1382_01590 PF02441 Flavoprotein Vag1382_01600 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Vag1382_01600 PF00672 HAMP domain Vag1382_01600 PF17200 Single Cache domain 2 Vag1382_01610 PF04002 RadC-like JAB domain Vag1382_01620 PF00830 Ribosomal L28 family Vag1382_01630 PF00471 Ribosomal protein L33 Vag1382_01650 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain Vag1382_01650 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain Vag1382_01650 PF06827 Zinc finger found in FPG and IleRS Vag1382_01670 PF05686 Glycosyl transferase family 90 Vag1382_01680 PF01467 Cytidylyltransferase-like Vag1382_01690 PF00535 Glycosyl transferase family 2 Vag1382_01700 PF00535 Glycosyl transferase family 2 Vag1382_01710 PF01075 Glycosyltransferase family 9 (heptosyltransferase) Vag1382_01720 PF01219 Prokaryotic diacylglycerol kinase Vag1382_01740 PF16363 GDP-mannose 4,6 dehydratase Vag1382_01750 PF00483 Nucleotidyl transferase Vag1382_01770 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family Vag1382_01790 PF02719 Polysaccharide biosynthesis protein Vag1382_01800 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family Vag1382_01810 PF02350 UDP-N-acetylglucosamine 2-epimerase Vag1382_01820 PF08666 SAF domain Vag1382_01820 PF03102 NeuB family Vag1382_01840 PF00483 Nucleotidyl transferase Vag1382_01850 PF02348 Cytidylyltransferase Vag1382_01860 PF07922 Glycosyltransferase family 52 Vag1382_01870 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) Vag1382_01880 PF01075 Glycosyltransferase family 9 (heptosyltransferase) Vag1382_01890 PF03279 Bacterial lipid A biosynthesis acyltransferase Vag1382_01900 PF01370 NAD dependent epimerase/dehydratase family Vag1382_01910 PF06082 Exopolysaccharide biosynthesis protein YbjH Vag1382_01930 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF Vag1382_01960 PF18412 Outer-membrane lipoprotein Wza C-terminal domain Vag1382_01960 PF02563 Polysaccharide biosynthesis/export protein Vag1382_01960 PF10531 SLBB domain Vag1382_02030 PF02719 Polysaccharide biosynthesis protein Vag1382_02030 PF08485 Polysaccharide biosynthesis protein C-terminal Vag1382_02040 PF04321 RmlD substrate binding domain Vag1382_02050 PF02350 UDP-N-acetylglucosamine 2-epimerase Vag1382_02070 PF00953 Glycosyl transferase family 4 Vag1382_02080 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain Vag1382_02080 PF00753 Metallo-beta-lactamase superfamily Vag1382_02080 PF10996 Beta-Casp domain Vag1382_02090 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain Vag1382_02090 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain Vag1382_02090 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Vag1382_02110 PF01370 NAD dependent epimerase/dehydratase family Vag1382_02140 PF00132 Bacterial transferase hexapeptide (six repeats) Vag1382_02170 PF13477 Glycosyl transferase 4-like Vag1382_02170 PF00534 Glycosyl transferases group 1 Vag1382_02180 PF02397 Bacterial sugar transferase Vag1382_02200 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family Vag1382_02210 PF02719 Polysaccharide biosynthesis protein Vag1382_02230 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain Vag1382_02230 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain Vag1382_02230 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Vag1382_02240 PF00121 Triosephosphate isomerase Vag1382_02280 PF08220 DeoR-like helix-turn-helix domain Vag1382_02280 PF00455 DeoR C terminal sensor domain Vag1382_02290 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded Vag1382_02300 PF06005 Cell division protein ZapB Vag1382_02310 PF03737 Aldolase/RraA Vag1382_02320 PF01040 UbiA prenyltransferase family Vag1382_02330 PF07724 AAA domain (Cdc48 subfamily) Vag1382_02330 PF00004 ATPase family associated with various cellular activities (AAA) Vag1382_02340 PF00227 Proteasome subunit Vag1382_02370 PF00356 Bacterial regulatory proteins, lacI family Vag1382_02380 PF18074 Primosomal protein N C-terminal domain Vag1382_02380 PF18319 PriA DNA helicase Cys-rich region (CRR) domain Vag1382_02380 PF17764 3′ DNA-binding domain (3′BD) Vag1382_02380 PF00271 Helicase conserved C-terminal domain Vag1382_02380 PF00270 DEAD/DEAH box helicase Vag1382_02390 PF01197 Ribosomal protein L31 Vag1382_02400 PF00338 Ribosomal protein S10p/S20e Vag1382_02410 PF00297 Ribosomal protein L3 Vag1382_02420 PF00573 Ribosomal protein L4/L1 family Vag1382_02430 PF00276 Ribosomal protein L23 Vag1382_02440 PF00181 Ribosomal Proteins L2, RNA binding domain Vag1382_02440 PF03947 Ribosomal Proteins L2, C-terminal domain Vag1382_02450 PF00203 Ribosomal protein S19 Vag1382_02460 PF00237 Ribosomal protein L22p/L17e Vag1382_02470 PF07650 KH domain Vag1382_02470 PF00189 Ribosomal protein S3, C-terminal domain Vag1382_02480 PF00252 Ribosomal protein L16p/L10e Vag1382_02490 PF00831 Ribosomal L29 protein Vag1382_02500 PF00366 Ribosomal protein S17 Vag1382_02510 PF00238 Ribosomal protein L14p/L23e Vag1382_02520 PF00467 KOW motif Vag1382_02520 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 Vag1382_02530 PF00673 ribosomal L5P family C-terminus Vag1382_02530 PF00281 Ribosomal protein L5 Vag1382_02540 PF00253 Ribosomal protein S14p/S29e Vag1382_02550 PF00410 Ribosomal protein S8 Vag1382_02560 PF00347 Ribosomal protein L6 Vag1382_02570 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast Vag1382_02580 PF03719 Ribosomal protein S5, C-terminal domain Vag1382_02580 PF00333 Ribosomal protein S5, N-terminal domain Vag1382_02590 PF00327 Ribosomal protein L30p/L7e Vag1382_02610 PF00344 SecY translocase Vag1382_02620 PF00444 Ribosomal protein L36 Vag1382_02630 PF00416 Ribosomal protein S13/S18 Vag1382_02640 PF00411 Ribosomal protein S11 Vag1382_02650 PF01479 S4 domain Vag1382_02650 PF00163 Ribosomal protein S4/S9 N-terminal domain Vag1382_02660 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain Vag1382_02660 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain Vag1382_02660 PF01000 RNA polymerase Rpb3/RpoA insert domain Vag1382_02670 PF01196 Ribosomal protein L17 Vag1382_02690 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase Vag1382_02690 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Vag1382_02710 PF13673 Acetyltransferase (GNAT) domain Vag1382_02720 PF00271 Helicase conserved C-terminal domain Vag1382_02720 PF03880 DbpA RNA binding domain Vag1382_02720 PF00270 DEAD/DEAH box helicase Vag1382_02740 PF00149 Calcineurin-like phosphoesterase Vag1382_02740 PF02872 5'-nucleotidase, C-terminal domain Vag1382_02750 PF14824 Sirohaem biosynthesis protein central Vag1382_02750 PF10414 Sirohaem synthase dimerisation region Vag1382_02750 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Vag1382_02760 PF01507 Phosphoadenosine phosphosulfate reductase family Vag1382_02770 PF00009 Elongation factor Tu GTP binding domain Vag1382_02780 PF02080 TrkA-C domain Vag1382_02780 PF03600 Citrate transporter Vag1382_02840 PF00005 ABC transporter Vag1382_02860 PF10795 Protein of unknown function (DUF2607) Vag1382_02870 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) Vag1382_02880 PF06526 Protein of unknown function (DUF1107) Vag1382_02890 PF01625 Peptide methionine sulfoxide reductase Vag1382_02900 PF17243 POTRA domain TamA domain 1 Vag1382_02900 PF01103 Surface antigen Vag1382_02910 PF04357 TamB, inner membrane protein subunit of TAM complex Vag1382_02920 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like Vag1382_02940 PF00719 Inorganic pyrophosphatase Vag1382_02950 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain Vag1382_02960 PF02875 Mur ligase family, glutamate ligase domain Vag1382_02960 PF01225 Mur ligase family, catalytic domain Vag1382_02960 PF08245 Mur ligase middle domain Vag1382_02970 PF02441 Flavoprotein Vag1382_02990 PF00528 Binding-protein-dependent transport system inner membrane component Vag1382_03000 PF00005 ABC transporter Vag1382_03010 PF03466 LysR substrate binding domain Vag1382_03010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vag1382_03020 PF00724 NADH:flavin oxidoreductase / NADH oxidase family Vag1382_03050 PF16868 NMT1-like family Vag1382_03060 PF02863 Arginine repressor, C-terminal domain Vag1382_03060 PF01316 Arginine repressor, DNA binding domain Vag1382_03070 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain Vag1382_03070 PF00056 lactate/malate dehydrogenase, NAD binding domain Vag1382_03090 PF00348 Polyprenyl synthetase Vag1382_03100 PF00829 Ribosomal prokaryotic L21 protein Vag1382_03110 PF01016 Ribosomal L27 protein Vag1382_03120 PF01018 GTP1/OBG Vag1382_03120 PF01926 50S ribosome-binding GTPase Vag1382_03130 PF06738 Putative threonine/serine exporter Vag1382_03140 PF12821 Threonine/Serine exporter, ThrE Vag1382_03150 PF00186 Dihydrofolate reductase Vag1382_03160 PF00149 Calcineurin-like phosphoesterase Vag1382_03170 PF04379 ApaG domain Vag1382_03180 PF00398 Ribosomal RNA adenine dimethylase Vag1382_03190 PF04166 Pyridoxal phosphate biosynthetic protein PdxA Vag1382_03200 PF09312 SurA N-terminal domain Vag1382_03210 PF03968 OstA-like protein Vag1382_03210 PF04453 LPS transport system D Vag1382_03220 PF05099 Tellurite resistance protein TerB Vag1382_03220 PF00226 DnaJ domain Vag1382_03240 PF00694 Aconitase C-terminal domain Vag1382_03250 PF00330 Aconitase family (aconitate hydratase) Vag1382_03260 PF00180 Isocitrate/isopropylmalate dehydrogenase Vag1382_03270 PF08502 LeuA allosteric (dimerisation) domain Vag1382_03270 PF00682 HMGL-like Vag1382_03290 PF01569 PAP2 superfamily Vag1382_03310 PF03466 LysR substrate binding domain Vag1382_03310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vag1382_03320 PF00501 AMP-binding enzyme Vag1382_03330 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Vag1382_03330 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Vag1382_03330 PF00205 Thiamine pyrophosphate enzyme, central domain Vag1382_03340 PF10369 Small subunit of acetolactate synthase Vag1382_03350 PF00990 Diguanylate cyclase, GGDEF domain Vag1382_03350 PF07694 5TMR of 5TMR-LYT Vag1382_03370 PF00224 Pyruvate kinase, barrel domain Vag1382_03370 PF02887 Pyruvate kinase, alpha/beta domain Vag1382_03380 PF08220 DeoR-like helix-turn-helix domain Vag1382_03380 PF00455 DeoR C terminal sensor domain Vag1382_03390 PF01380 SIS domain Vag1382_03410 PF00072 Response regulator receiver domain Vag1382_03410 PF00486 Transcriptional regulatory protein, C terminal Vag1382_03420 PF00512 His Kinase A (phospho-acceptor) domain Vag1382_03420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vag1382_03420 PF00672 HAMP domain Vag1382_03430 PF00465 Iron-containing alcohol dehydrogenase Vag1382_03440 PF02733 Dak1 domain Vag1382_03450 PF02734 DAK2 domain Vag1382_03460 PF05524 PEP-utilising enzyme, N-terminal Vag1382_03460 PF00391 PEP-utilising enzyme, mobile domain Vag1382_03460 PF02896 PEP-utilising enzyme, TIM barrel domain Vag1382_03470 PF00989 PAS fold Vag1382_03470 PF00158 Sigma-54 interaction domain Vag1382_03470 PF02954 Bacterial regulatory protein, Fis family Vag1382_03480 PF05068 Mannitol repressor Vag1382_03490 PF01232 Mannitol dehydrogenase Rossmann domain Vag1382_03490 PF08125 Mannitol dehydrogenase C-terminal domain Vag1382_03500 PF02378 Phosphotransferase system, EIIC Vag1382_03500 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit Vag1382_03500 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 Vag1382_03560 PF03180 NLPA lipoprotein Vag1382_03570 PF04545 Sigma-70, region 4 Vag1382_03570 PF04542 Sigma-70 region 2 Vag1382_03570 PF00140 Sigma-70 factor, region 1.2 Vag1382_03570 PF03979 Sigma-70 factor, region 1.1 Vag1382_03570 PF04539 Sigma-70 region 3 Vag1382_03570 PF04546 Sigma-70, non-essential region Vag1382_03580 PF08278 DNA primase DnaG DnaB-binding Vag1382_03580 PF08275 DNA primase catalytic core, N-terminal domain Vag1382_03580 PF01807 CHC2 zinc finger Vag1382_03580 PF10410 DnaB-helicase binding domain of primase Vag1382_03590 PF09424 Yqey-like protein Vag1382_03600 PF01165 Ribosomal protein S21 Vag1382_03610 PF00814 Glycoprotease family Vag1382_03620 PF00561 alpha/beta hydrolase fold Vag1382_03630 PF02660 Glycerol-3-phosphate acyltransferase Vag1382_03640 PF02152 Dihydroneopterin aldolase Vag1382_03650 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) Vag1382_03660 PF02673 Bacitracin resistance protein BacA Vag1382_03670 PF01743 Poly A polymerase head domain Vag1382_03670 PF01966 HD domain Vag1382_03670 PF12627 Probable RNA and SrmB- binding site of polymerase A Vag1382_03680 PF13401 AAA domain Vag1382_03680 PF01471 Putative peptidoglycan binding domain Vag1382_03710 PF08239 Bacterial SH3 domain Vag1382_03720 PF01384 Phosphate transporter family Vag1382_03730 PF01865 Protein of unknown function DUF47 Vag1382_03740 PF01928 CYTH domain Vag1382_03760 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Vag1382_03760 PF00672 HAMP domain Vag1382_03760 PF02743 Cache domain Vag1382_03770 PF03710 Glutamate-ammonia ligase adenylyltransferase Vag1382_03770 PF08335 GlnD PII-uridylyltransferase Vag1382_03780 PF01467 Cytidylyltransferase-like Vag1382_03780 PF00294 pfkB family carbohydrate kinase Vag1382_03790 PF02321 Outer membrane efflux protein Vag1382_03800 PF00293 NUDIX domain Vag1382_03810 PF06853 Protein of unknown function (DUF1249) Vag1382_03820 PF00149 Calcineurin-like phosphoesterase Vag1382_03830 PF05728 Uncharacterised protein family (UPF0227) Vag1382_03840 PF01751 Toprim domain Vag1382_03840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vag1382_03840 PF00986 DNA gyrase B subunit, carboxyl terminus Vag1382_03840 PF00204 DNA gyrase B Vag1382_03850 PF03989 DNA gyrase C-terminal domain, beta-propeller Vag1382_03850 PF00521 DNA gyrase/topoisomerase IV, subunit A Vag1382_03860 PF13180 PDZ domain Vag1382_03870 PF00595 PDZ domain Vag1382_03880 PF06295 Protein of unknown function (DUF1043) Vag1382_03890 PF03969 AFG1-like ATPase Vag1382_03900 PF00572 Ribosomal protein L13 Vag1382_03910 PF00380 Ribosomal protein S9/S16 Vag1382_03920 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal Vag1382_03920 PF00355 Rieske [2Fe-2S] domain Vag1382_03930 PF00032 Cytochrome b(C-terminal)/b6/petD Vag1382_03930 PF00033 Cytochrome b/b6/petB Vag1382_03940 PF02167 Cytochrome C1 family Vag1382_03950 PF02798 Glutathione S-transferase, N-terminal domain Vag1382_03950 PF00043 Glutathione S-transferase, C-terminal domain Vag1382_03960 PF04386 Stringent starvation protein B Vag1382_03970 PF04972 BON domain Vag1382_03980 PF13580 SIS domain Vag1382_03990 PF02021 Uncharacterised protein family UPF0102 Vag1382_04000 PF04348 LppC putative lipoprotein Vag1382_04010 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Vag1382_04020 PF01795 MraW methylase family Vag1382_04030 PF04999 Cell division protein FtsL Vag1382_04040 PF00905 Penicillin binding protein transpeptidase domain Vag1382_04040 PF03717 Penicillin-binding Protein dimerisation domain Vag1382_04050 PF01225 Mur ligase family, catalytic domain Vag1382_04050 PF02875 Mur ligase family, glutamate ligase domain Vag1382_04050 PF08245 Mur ligase middle domain Vag1382_04060 PF08245 Mur ligase middle domain Vag1382_04060 PF02875 Mur ligase family, glutamate ligase domain Vag1382_04060 PF01225 Mur ligase family, catalytic domain Vag1382_04070 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 Vag1382_04070 PF00953 Glycosyl transferase family 4 Vag1382_04080 PF02875 Mur ligase family, glutamate ligase domain Vag1382_04080 PF08245 Mur ligase middle domain Vag1382_04090 PF01098 Cell cycle protein Vag1382_04100 PF04101 Glycosyltransferase family 28 C-terminal domain Vag1382_04100 PF03033 Glycosyltransferase family 28 N-terminal domain Vag1382_04110 PF02875 Mur ligase family, glutamate ligase domain Vag1382_04110 PF08245 Mur ligase middle domain Vag1382_04110 PF01225 Mur ligase family, catalytic domain Vag1382_04120 PF03799 Cell division protein FtsQ Vag1382_04120 PF08478 POTRA domain, FtsQ-type Vag1382_04130 PF02491 SHS2 domain inserted in FTSA Vag1382_04140 PF00091 Tubulin/FtsZ family, GTPase domain Vag1382_04140 PF12327 FtsZ family, C-terminal domain Vag1382_04150 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase Vag1382_04170 PF07516 SecA Wing and Scaffold domain Vag1382_04170 PF07517 SecA DEAD-like domain Vag1382_04170 PF01043 SecA preprotein cross-linking domain Vag1382_04170 PF02810 SEC-C motif Vag1382_04180 PF00293 NUDIX domain Vag1382_04190 PF05173 Dihydrodipicolinate reductase, C-terminus Vag1382_04190 PF01113 Dihydrodipicolinate reductase, N-terminus Vag1382_04210 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain Vag1382_04210 PF00117 Glutamine amidotransferase class-I Vag1382_04220 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Vag1382_04220 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain Vag1382_04220 PF02142 MGS-like domain Vag1382_04250 PF01925 Sulfite exporter TauE/SafE Vag1382_04260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vag1382_04260 PF03466 LysR substrate binding domain Vag1382_04270 PF03458 UPF0126 domain Vag1382_04280 PF01497 Periplasmic binding protein Vag1382_04290 PF17113 Regulatory signalling modulator protein AmpE Vag1382_04290 PF03186 CobD/Cbib protein Vag1382_04300 PF01048 Phosphorylase superfamily Vag1382_04320 PF07992 Pyridine nucleotide-disulphide oxidoreductase Vag1382_04320 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Vag1382_04330 PF01493 GXGXG motif Vag1382_04330 PF04898 Glutamate synthase central domain Vag1382_04330 PF01645 Conserved region in glutamate synthase Vag1382_04330 PF00310 Glutamine amidotransferases class-II Vag1382_04340 PF07992 Pyridine nucleotide-disulphide oxidoreductase Vag1382_04340 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Vag1382_04350 PF01645 Conserved region in glutamate synthase Vag1382_04350 PF00310 Glutamine amidotransferases class-II Vag1382_04350 PF01493 GXGXG motif Vag1382_04350 PF04898 Glutamate synthase central domain Vag1382_04360 PF04055 Radical SAM superfamily Vag1382_04360 PF16199 Radical_SAM C-terminal domain Vag1382_04370 PF00990 Diguanylate cyclase, GGDEF domain Vag1382_04370 PF00360 Phytochrome region Vag1382_04370 PF00563 EAL domain Vag1382_04370 PF01590 GAF domain Vag1382_04380 PF00989 PAS fold Vag1382_04380 PF00512 His Kinase A (phospho-acceptor) domain Vag1382_04380 PF00072 Response regulator receiver domain Vag1382_04380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vag1382_04380 PF01627 Hpt domain Vag1382_04380 PF18415 Histidine kinase receptor ArcB trans-membrane domain Vag1382_04400 PF00486 Transcriptional regulatory protein, C terminal Vag1382_04400 PF00072 Response regulator receiver domain Vag1382_04420 PF03737 Aldolase/RraA Vag1382_04440 PF00696 Amino acid kinase family Vag1382_04440 PF03447 Homoserine dehydrogenase, NAD binding domain Vag1382_04440 PF01842 ACT domain Vag1382_04440 PF13840 ACT domain Vag1382_04440 PF00742 Homoserine dehydrogenase Vag1382_04450 PF00288 GHMP kinases N terminal domain Vag1382_04450 PF08544 GHMP kinases C terminal Vag1382_04460 PF00291 Pyridoxal-phosphate dependent enzyme Vag1382_04460 PF14821 Threonine synthase N terminus Vag1382_04480 PF01228 Glycine radical Vag1382_04490 PF01261 Xylose isomerase-like TIM barrel Vag1382_04500 PF03167 Uracil DNA glycosylase superfamily Vag1382_04530 PF01235 Sodium:alanine symporter family Vag1382_04540 PF03883 Peroxide stress protein YaaA Vag1382_04550 PF00271 Helicase conserved C-terminal domain Vag1382_04550 PF00270 DEAD/DEAH box helicase Vag1382_04560 PF05175 Methyltransferase small domain Vag1382_04570 PF05525 Branched-chain amino acid transport protein Vag1382_04580 PF00258 Flavodoxin Vag1382_04590 PF02899 Phage integrase, N-terminal SAM-like domain Vag1382_04590 PF00589 Phage integrase family Vag1382_04600 PF10411 Disulfide bond isomerase protein N-terminus Vag1382_04600 PF13098 Thioredoxin-like domain Vag1382_04610 PF17768 RecJ OB domain Vag1382_04610 PF01368 DHH family Vag1382_04610 PF02272 DHHA1 domain Vag1382_04620 PF03462 PCRF domain Vag1382_04620 PF00472 RF-1 domain Vag1382_04630 PF00152 tRNA synthetases class II (D, K and N) Vag1382_04630 PF01336 OB-fold nucleic acid binding domain Vag1382_04640 PF00158 Sigma-54 interaction domain Vag1382_04640 PF00072 Response regulator receiver domain Vag1382_04640 PF02954 Bacterial regulatory protein, Fis family Vag1382_04670 PF00248 Aldo/keto reductase family Vag1382_04690 PF02976 DNA mismatch repair enzyme MutH Vag1382_04700 PF00293 NUDIX domain Vag1382_04710 PF01590 GAF domain Vag1382_04710 PF02896 PEP-utilising enzyme, TIM barrel domain Vag1382_04710 PF00391 PEP-utilising enzyme, mobile domain Vag1382_04710 PF05524 PEP-utilising enzyme, N-terminal Vag1382_04720 PF01925 Sulfite exporter TauE/SafE Vag1382_04740 PF00303 Thymidylate synthase Vag1382_04760 PF02690 Na+/Pi-cotransporter Vag1382_04770 PF03466 LysR substrate binding domain Vag1382_04770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vag1382_04780 PF01022 Bacterial regulatory protein, arsR family Vag1382_04790 PF01649 Ribosomal protein S20 Vag1382_04800 PF03023 Lipid II flippase MurJ Vag1382_04810 PF06574 FAD synthetase Vag1382_04810 PF01687 Riboflavin kinase Vag1382_04820 PF08264 Anticodon-binding domain of tRNA Vag1382_04820 PF00133 tRNA synthetases class I (I, L, M and V) Vag1382_04820 PF06827 Zinc finger found in FPG and IleRS Vag1382_04830 PF01252 Signal peptidase (SPase) II Vag1382_04840 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Vag1382_04850 PF02401 LytB protein Vag1382_04860 PF01527 Transposase Vag1382_04870 PF00665 Integrase core domain Vag1382_04890 PF04397 LytTr DNA-binding domain Vag1382_04890 PF00072 Response regulator receiver domain Vag1382_04900 PF07694 5TMR of 5TMR-LYT Vag1382_04900 PF06580 Histidine kinase Vag1382_04910 PF02554 Carbon starvation protein CstA Vag1382_04940 PF01380 SIS domain Vag1382_04950 PF03702 Anhydro-N-acetylmuramic acid kinase Vag1382_04960 PF00933 Glycosyl hydrolase family 3 N terminal domain Vag1382_04970 PF00793 DAHP synthetase I family Vag1382_04980 PF01817 Chorismate mutase type II Vag1382_04980 PF02153 Prephenate dehydrogenase Vag1382_04990 PF01551 Peptidase family M23 Vag1382_04990 PF01464 Transglycosylase SLT domain Vag1382_04990 PF10145 Phage-related minor tail protein Vag1382_05000 PF07238 PilZ domain Vag1382_05010 PF12848 ABC transporter Vag1382_05010 PF00005 ABC transporter Vag1382_05020 PF14718 Soluble lytic murein transglycosylase L domain Vag1382_05020 PF01464 Transglycosylase SLT domain Vag1382_05030 PF01371 Trp repressor protein Vag1382_05040 PF01931 Protein of unknown function DUF84 Vag1382_05050 PF01817 Chorismate mutase type II Vag1382_05050 PF00800 Prephenate dehydratase Vag1382_05060 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein Vag1382_05070 PF01464 Transglycosylase SLT domain Vag1382_05070 PF00497 Bacterial extracellular solute-binding proteins, family 3 Vag1382_05080 PF13525 Outer membrane lipoprotein Vag1382_05090 PF00849 RNA pseudouridylate synthase Vag1382_05090 PF01479 S4 domain Vag1382_05110 PF10431 C-terminal, D2-small domain, of ClpB protein Vag1382_05110 PF02861 Clp amino terminal domain, pathogenicity island component Vag1382_05110 PF00004 ATPase family associated with various cellular activities (AAA) Vag1382_05110 PF07724 AAA domain (Cdc48 subfamily) Vag1382_05110 PF17871 AAA lid domain Vag1382_05130 PF03411 Penicillin-insensitive murein endopeptidase Vag1382_05150 PF00037 4Fe-4S binding domain Vag1382_05170 PF04381 Putative exonuclease, RdgC Vag1382_05180 PF00072 Response regulator receiver domain Vag1382_05180 PF00486 Transcriptional regulatory protein, C terminal Vag1382_05190 PF00989 PAS fold Vag1382_05190 PF11808 Phosphate regulon sensor protein PhoR Vag1382_05190 PF00512 His Kinase A (phospho-acceptor) domain Vag1382_05190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vag1382_05200 PF12849 PBP superfamily domain Vag1382_05210 PF02541 Ppx/GppA phosphatase family Vag1382_05220 PF02503 Polyphosphate kinase middle domain Vag1382_05220 PF13089 Polyphosphate kinase N-terminal domain Vag1382_05220 PF13090 Polyphosphate kinase C-terminal domain 2 Vag1382_05220 PF17941 Polyphosphate kinase C-terminal domain 1 Vag1382_05230 PF00528 Binding-protein-dependent transport system inner membrane component Vag1382_05240 PF00528 Binding-protein-dependent transport system inner membrane component Vag1382_05250 PF00005 ABC transporter Vag1382_05260 PF01895 PhoU domain Vag1382_05270 PF03976 Polyphosphate kinase 2 (PPK2) Vag1382_05280 PF03932 CutC family Vag1382_05290 PF10417 C-terminal domain of 1-Cys peroxiredoxin Vag1382_05290 PF00578 AhpC/TSA family Vag1382_05300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vag1382_05300 PF03466 LysR substrate binding domain Vag1382_05310 PF01274 Malate synthase Vag1382_05320 PF00463 Isocitrate lyase family Vag1382_05330 PF00571 CBS domain Vag1382_05350 PF02547 Queuosine biosynthesis protein Vag1382_05360 PF01702 Queuine tRNA-ribosyltransferase Vag1382_05370 PF02699 Preprotein translocase subunit Vag1382_05380 PF02355 Protein export membrane protein Vag1382_05380 PF07549 SecD/SecF GG Motif Vag1382_05380 PF13721 SecD export protein N-terminal TM region Vag1382_05390 PF07549 SecD/SecF GG Motif Vag1382_05390 PF02355 Protein export membrane protein Vag1382_05400 PF00459 Inositol monophosphatase family Vag1382_05410 PF00588 SpoU rRNA Methylase family Vag1382_05420 PF02082 Transcriptional regulator Vag1382_05430 PF00266 Aminotransferase class-V Vag1382_05440 PF01592 NifU-like N terminal domain Vag1382_05450 PF01521 Iron-sulphur cluster biosynthesis Vag1382_05460 PF00226 DnaJ domain Vag1382_05460 PF07743 HSCB C-terminal oligomerisation domain Vag1382_05470 PF00012 Hsp70 protein Vag1382_05480 PF00111 2Fe-2S iron-sulfur cluster binding domain Vag1382_05490 PF04384 Iron-sulphur cluster assembly Vag1382_05500 PF00883 Cytosol aminopeptidase family, catalytic domain Vag1382_05500 PF12404 Peptidase Vag1382_05510 PF00334 Nucleoside diphosphate kinase Vag1382_05520 PF04055 Radical SAM superfamily Vag1382_05530 PF13464 Domain of unknown function (DUF4115) Vag1382_05540 PF04551 GcpE protein Vag1382_05550 PF03129 Anticodon binding domain Vag1382_05550 PF13393 Histidyl-tRNA synthetase Vag1382_05560 PF09976 Tetratricopeptide repeat-like domain Vag1382_05570 PF13360 PQQ-like domain Vag1382_05580 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal Vag1382_05580 PF01926 50S ribosome-binding GTPase Vag1382_05610 PF02601 Exonuclease VII, large subunit Vag1382_05610 PF13742 OB-fold nucleic acid binding domain Vag1382_05620 PF00571 CBS domain Vag1382_05620 PF00478 IMP dehydrogenase / GMP reductase domain Vag1382_05630 PF00958 GMP synthase C terminal domain Vag1382_05630 PF02540 NAD synthase Vag1382_05630 PF00117 Glutamine amidotransferase class-I Vag1382_05640 PF13356 Arm DNA-binding domain Vag1382_05640 PF00589 Phage integrase family Vag1382_05720 PF18821 Large polyvalent protein-associated domain 7 Vag1382_05720 PF03432 Relaxase/Mobilisation nuclease domain Vag1382_05780 PF02384 N-6 DNA Methylase Vag1382_05800 PF03553 Na+/H+ antiporter family Vag1382_05810 PF00704 Glycosyl hydrolases family 18 Vag1382_05810 PF06483 Chitinase C Vag1382_05820 PF01184 GPR1/FUN34/yaaH family Vag1382_05830 PF01235 Sodium:alanine symporter family Vag1382_05840 PF01266 FAD dependent oxidoreductase Vag1382_05860 PF07969 Amidohydrolase family Vag1382_05870 PF01053 Cys/Met metabolism PLP-dependent enzyme Vag1382_05880 PF00202 Aminotransferase class-III Vag1382_05920 PF00795 Carbon-nitrogen hydrolase Vag1382_05920 PF00583 Acetyltransferase (GNAT) family Vag1382_05930 PF03466 LysR substrate binding domain Vag1382_05930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vag1382_05950 PF01668 SmpB protein Vag1382_05960 PF03364 Polyketide cyclase / dehydrase and lipid transport Vag1382_05970 PF03658 RnfH family Ubiquitin Vag1382_05980 PF04355 SmpA / OmlA family Vag1382_05990 PF02463 RecF/RecN/SMC N terminal domain Vag1382_06010 PF01513 ATP-NAD kinase Vag1382_06020 PF01025 GrpE Vag1382_06030 PF00375 Sodium:dicarboxylate symporter family Vag1382_06040 PF00012 Hsp70 protein Vag1382_06050 PF01556 DnaJ C terminal domain Vag1382_06050 PF00226 DnaJ domain Vag1382_06050 PF00684 DnaJ central domain Vag1382_06060 PF07963 Prokaryotic N-terminal methylation motif Vag1382_06060 PF00114 Pilin (bacterial filament) Vag1382_06110 PF03806 AbgT putative transporter family Vag1382_06120 PF14437 MafB19-like deaminase Vag1382_06130 PF01464 Transglycosylase SLT domain Vag1382_06130 PF00497 Bacterial extracellular solute-binding proteins, family 3 Vag1382_06140 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal Vag1382_06140 PF02769 AIR synthase related protein, C-terminal domain Vag1382_06140 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain Vag1382_06170 PF00593 TonB dependent receptor Vag1382_06170 PF07715 TonB-dependent Receptor Plug Domain Vag1382_06200 PF01546 Peptidase family M20/M25/M40 Vag1382_06200 PF07687 Peptidase dimerisation domain Vag1382_06210 PF00860 Permease family Vag1382_06220 PF00156 Phosphoribosyl transferase domain Vag1382_06240 PF07417 Sigma factor-binding transcriptional regulator Crl Vag1382_06250 PF07417 Sigma factor-binding transcriptional regulator Crl Vag1382_06260 PF01472 PUA domain Vag1382_06260 PF00696 Amino acid kinase family Vag1382_06270 PF00171 Aldehyde dehydrogenase family Vag1382_06280 PF03477 ATP cone domain Vag1382_06290 PF01872 RibD C-terminal domain Vag1382_06290 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Vag1382_06300 PF00677 Lumazine binding domain Vag1382_06310 PF00925 GTP cyclohydrolase II Vag1382_06310 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase Vag1382_06320 PF00885 6,7-dimethyl-8-ribityllumazine synthase Vag1382_06330 PF01029 NusB family Vag1382_06340 PF02769 AIR synthase related protein, C-terminal domain Vag1382_06340 PF00586 AIR synthase related protein, N-terminal domain Vag1382_06350 PF04608 Phosphatidylglycerophosphatase A Vag1382_06360 PF13292 1-deoxy-D-xylulose-5-phosphate synthase Vag1382_06360 PF02780 Transketolase, C-terminal domain Vag1382_06360 PF02779 Transketolase, pyrimidine binding domain Vag1382_06370 PF00348 Polyprenyl synthetase Vag1382_06380 PF02609 Exonuclease VII small subunit Vag1382_06390 PF01618 MotA/TolQ/ExbB proton channel family Vag1382_06400 PF00691 OmpA family Vag1382_06400 PF13677 Membrane MotB of proton-channel complex MotA/MotB Vag1382_06410 PF02926 THUMP domain Vag1382_06410 PF02568 Thiamine biosynthesis protein (ThiI) Vag1382_06430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vag1382_06430 PF03466 LysR substrate binding domain Vag1382_06450 PF04241 Protein of unknown function (DUF423) Vag1382_06460 PF18125 RlmM ferredoxin-like domain Vag1382_06460 PF01728 FtsJ-like methyltransferase Vag1382_06470 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain Vag1382_06470 PF01367 5'-3' exonuclease, C-terminal SAM fold Vag1382_06480 PF03641 Possible lysine decarboxylase Vag1382_06480 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases Vag1382_06480 PF11892 Domain of unknown function (DUF3412) Vag1382_06490 PF00990 Diguanylate cyclase, GGDEF domain Vag1382_06490 PF00072 Response regulator receiver domain Vag1382_06510 PF14489 QueF-like protein Vag1382_06510 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term Vag1382_06520 PF07348 Syd protein (SUKH-2) Vag1382_06530 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) Vag1382_06540 PF03180 NLPA lipoprotein Vag1382_06550 PF00528 Binding-protein-dependent transport system inner membrane component Vag1382_06560 PF00005 ABC transporter Vag1382_06560 PF09383 NIL domain Vag1382_06580 PF00356 Bacterial regulatory proteins, lacI family Vag1382_06590 PF00367 phosphotransferase system, EIIB Vag1382_06590 PF02378 Phosphotransferase system, EIIC Vag1382_06600 PF16657 Maltogenic Amylase, C-terminal domain Vag1382_06600 PF00128 Alpha amylase, catalytic domain Vag1382_06640 PF00464 Serine hydroxymethyltransferase Vag1382_06650 PF04055 Radical SAM superfamily Vag1382_06650 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family Vag1382_06660 PF03099 Biotin/lipoate A/B protein ligase family Vag1382_06670 PF04359 Protein of unknown function (DUF493) Vag1382_06680 PF00768 D-alanyl-D-alanine carboxypeptidase Vag1382_06680 PF07943 Penicillin-binding protein 5, C-terminal domain Vag1382_06690 PF05036 Sporulation related domain Vag1382_06690 PF03330 Lytic transglycolase Vag1382_06700 PF01098 Cell cycle protein Vag1382_06710 PF03717 Penicillin-binding Protein dimerisation domain Vag1382_06710 PF00905 Penicillin binding protein transpeptidase domain Vag1382_06720 PF02590 Predicted SPOUT methyltransferase Vag1382_06740 PF14840 Processivity clamp loader gamma complex DNA pol III C-term Vag1382_06740 PF06144 DNA polymerase III, delta subunit Vag1382_06750 PF04390 Lipopolysaccharide-assembly Vag1382_06760 PF08264 Anticodon-binding domain of tRNA Vag1382_06760 PF00133 tRNA synthetases class I (I, L, M and V) Vag1382_06760 PF13603 Leucyl-tRNA synthetase, Domain 2 Vag1382_06770 PF07295 Zinc-ribbon containing domain Vag1382_06780 PF00795 Carbon-nitrogen hydrolase Vag1382_06790 PF00571 CBS domain Vag1382_06790 PF03471 Transporter associated domain Vag1382_06800 PF02130 Uncharacterized protein family UPF0054 Vag1382_06810 PF02562 PhoH-like protein Vag1382_06820 PF04055 Radical SAM superfamily Vag1382_06820 PF00919 Uncharacterized protein family UPF0004 Vag1382_06820 PF01938 TRAM domain Vag1382_06830 PF01494 FAD binding domain Vag1382_06840 PF06071 Protein of unknown function (DUF933) Vag1382_06840 PF01926 50S ribosome-binding GTPase Vag1382_06850 PF01195 Peptidyl-tRNA hydrolase Vag1382_06860 PF14572 Phosphoribosyl synthetase-associated domain Vag1382_06860 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase Vag1382_06870 PF00288 GHMP kinases N terminal domain Vag1382_06870 PF08544 GHMP kinases C terminal Vag1382_06880 PF03550 Outer membrane lipoprotein LolB Vag1382_06890 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain Vag1382_06890 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain Vag1382_06890 PF01488 Shikimate / quinate 5-dehydrogenase Vag1382_06900 PF00472 RF-1 domain Vag1382_06900 PF03462 PCRF domain Vag1382_06910 PF13847 Methyltransferase domain Vag1382_06910 PF17827 PrmC N-terminal domain Vag1382_06920 PF04247 Invasion gene expression up-regulator, SirB Vag1382_06930 PF13369 Transglutaminase-like superfamily Vag1382_06940 PF00793 DAHP synthetase I family Vag1382_06950 PF00149 Calcineurin-like phosphoesterase Vag1382_06950 PF02872 5'-nucleotidase, C-terminal domain Vag1382_06960 PF04073 Aminoacyl-tRNA editing domain Vag1382_06970 PF00849 RNA pseudouridylate synthase Vag1382_06970 PF01479 S4 domain Vag1382_06980 PF01713 Smr domain Vag1382_07020 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain Vag1382_07020 PF02838 Glycosyl hydrolase family 20, domain 2 Vag1382_07020 PF00728 Glycosyl hydrolase family 20, catalytic domain Vag1382_07020 PF03173 Putative carbohydrate binding domain Vag1382_07050 PF00403 Heavy-metal-associated domain Vag1382_07060 PF13609 Gram-negative porin Vag1382_07070 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) Vag1382_07080 PF00749 tRNA synthetases class I (E and Q), catalytic domain Vag1382_07090 PF00691 OmpA family Vag1382_07090 PF01389 OmpA-like transmembrane domain Vag1382_07170 PF01584 CheW-like domain Vag1382_07170 PF00072 Response regulator receiver domain Vag1382_07180 PF01739 CheR methyltransferase, SAM binding domain Vag1382_07180 PF03705 CheR methyltransferase, all-alpha domain Vag1382_07190 PF00460 Flagella basal body rod protein Vag1382_07200 PF00460 Flagella basal body rod protein Vag1382_07200 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Vag1382_07210 PF13861 FlgD Tudor-like domain Vag1382_07210 PF03963 Flagellar hook capping protein - N-terminal region Vag1382_07210 PF13860 FlgD Ig-like domain Vag1382_07220 PF07559 Flagellar basal body protein FlaE Vag1382_07220 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Vag1382_07220 PF00460 Flagella basal body rod protein Vag1382_07230 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Vag1382_07230 PF00460 Flagella basal body rod protein Vag1382_07240 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Vag1382_07240 PF00460 Flagella basal body rod protein Vag1382_07250 PF02107 Flagellar L-ring protein Vag1382_07260 PF02119 Flagellar P-ring protein Vag1382_07270 PF10135 Rod binding protein Vag1382_07270 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase Vag1382_07280 PF07196 Flagellin hook IN motif Vag1382_07280 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Vag1382_07290 PF00669 Bacterial flagellin N-terminal helical region Vag1382_07310 PF00700 Bacterial flagellin C-terminal helical region Vag1382_07310 PF00669 Bacterial flagellin N-terminal helical region Vag1382_07310 PF07196 Flagellin hook IN motif Vag1382_07320 PF00669 Bacterial flagellin N-terminal helical region Vag1382_07320 PF07196 Flagellin hook IN motif Vag1382_07320 PF00700 Bacterial flagellin C-terminal helical region Vag1382_07330 PF00669 Bacterial flagellin N-terminal helical region Vag1382_07330 PF07196 Flagellin hook IN motif Vag1382_07330 PF00700 Bacterial flagellin C-terminal helical region Vag1382_07340 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 Vag1382_07350 PF02896 PEP-utilising enzyme, TIM barrel domain Vag1382_07350 PF00391 PEP-utilising enzyme, mobile domain Vag1382_07350 PF05524 PEP-utilising enzyme, N-terminal Vag1382_07370 PF00381 PTS HPr component phosphorylation site Vag1382_07380 PF00291 Pyridoxal-phosphate dependent enzyme Vag1382_07400 PF04354 ZipA, C-terminal FtsZ-binding domain Vag1382_07410 PF12826 Helix-hairpin-helix motif Vag1382_07410 PF03119 NAD-dependent DNA ligase C4 zinc finger domain Vag1382_07410 PF03120 NAD-dependent DNA ligase OB-fold domain Vag1382_07410 PF01653 NAD-dependent DNA ligase adenylation domain Vag1382_07410 PF00533 BRCA1 C Terminus (BRCT) domain Vag1382_07420 PF03573 outer membrane porin, OprD family Vag1382_07460 PF01145 SPFH domain / Band 7 family Vag1382_07460 PF16200 C-terminal region of band_7 Vag1382_07470 PF00085 Thioredoxin Vag1382_07480 PF00106 short chain dehydrogenase Vag1382_07490 PF01370 NAD dependent epimerase/dehydratase family Vag1382_07490 PF08338 Domain of unknown function (DUF1731) Vag1382_07500 PF07556 Protein of unknown function (DUF1538) Vag1382_07510 PF07556 Protein of unknown function (DUF1538) Vag1382_07550 PF12850 Calcineurin-like phosphoesterase superfamily domain Vag1382_07580 PF17323 Trans-membrane regulatory protein ToxS Vag1382_07590 PF00486 Transcriptional regulatory protein, C terminal Vag1382_07600 PF00183 Hsp90 protein Vag1382_07600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vag1382_07610 PF05191 Adenylate kinase, active site lid Vag1382_07620 PF00762 Ferrochelatase Vag1382_07640 PF00854 POT family Vag1382_07650 PF02357 Transcription termination factor nusG Vag1382_07660 PF00733 Asparagine synthase Vag1382_07660 PF13537 Glutamine amidotransferase domain Vag1382_07670 PF02254 TrkA-N domain Vag1382_07670 PF00999 Sodium/hydrogen exchanger family Vag1382_07680 PF01047 MarR family Vag1382_07680 PF00480 ROK family Vag1382_07690 PF01979 Amidohydrolase family Vag1382_07700 PF00367 phosphotransferase system, EIIB Vag1382_07700 PF02378 Phosphotransferase system, EIIC Vag1382_07700 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 Vag1382_07710 PF00749 tRNA synthetases class I (E and Q), catalytic domain Vag1382_07710 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain Vag1382_07720 PF01475 Ferric uptake regulator family Vag1382_07740 PF00258 Flavodoxin Vag1382_07760 PF12697 Alpha/beta hydrolase family Vag1382_07770 PF03925 SeqA protein C-terminal domain Vag1382_07770 PF17206 SeqA protein N-terminal domain Vag1382_07780 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Vag1382_07780 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Vag1382_07780 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Vag1382_07780 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Vag1382_07800 PF01784 NIF3 (NGG1p interacting factor 3) Vag1382_07810 PF00285 Citrate synthase, C-terminal domain Vag1382_07820 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit Vag1382_07830 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit Vag1382_07840 PF00890 FAD binding domain Vag1382_07840 PF02910 Fumarate reductase flavoprotein C-term Vag1382_07850 PF13085 2Fe-2S iron-sulfur cluster binding domain Vag1382_07860 PF16870 2-oxoglutarate dehydrogenase C-terminal Vag1382_07860 PF02779 Transketolase, pyrimidine binding domain Vag1382_07860 PF00676 Dehydrogenase E1 component Vag1382_07860 PF16078 2-oxoglutarate dehydrogenase N-terminus Vag1382_07870 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Vag1382_07870 PF00364 Biotin-requiring enzyme Vag1382_07870 PF02817 e3 binding domain Vag1382_07880 PF08442 ATP-grasp domain Vag1382_07880 PF00549 CoA-ligase Vag1382_07890 PF02629 CoA binding domain Vag1382_07890 PF00549 CoA-ligase Vag1382_07900 PF00950 ABC 3 transport family Vag1382_07910 PF00005 ABC transporter Vag1382_07920 PF01297 Zinc-uptake complex component A periplasmic Vag1382_07930 PF02311 AraC-like ligand binding domain Vag1382_07930 PF12833 Helix-turn-helix domain Vag1382_07940 PF04023 FeoA domain Vag1382_07950 PF17910 FeoB cytosolic helical domain Vag1382_07950 PF02421 Ferrous iron transport protein B Vag1382_07950 PF07670 Nucleoside recognition Vag1382_07950 PF07664 Ferrous iron transport protein B C terminus Vag1382_07980 PF05746 DALR anticodon binding domain Vag1382_07980 PF00750 tRNA synthetases class I (R) Vag1382_07980 PF03485 Arginyl tRNA synthetase N terminal domain Vag1382_07990 PF06185 YecM protein Vag1382_08010 PF00089 Trypsin Vag1382_08020 PF00551 Formyl transferase Vag1382_08020 PF01842 ACT domain Vag1382_08030 PF13307 Helicase C-terminal domain Vag1382_08030 PF04851 Type III restriction enzyme, res subunit Vag1382_08040 PF00814 Glycoprotease family Vag1382_08060 PF03843 Outer membrane lipoprotein Slp family Vag1382_08070 PF00561 alpha/beta hydrolase fold Vag1382_08080 PF13193 AMP-binding enzyme C-terminal domain Vag1382_08080 PF00501 AMP-binding enzyme Vag1382_08090 PF00570 HRDC domain Vag1382_08090 PF01612 3'-5' exonuclease Vag1382_08100 PF03776 Septum formation topological specificity factor MinE Vag1382_08110 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Vag1382_08120 PF03775 Septum formation inhibitor MinC, C-terminal domain Vag1382_08120 PF05209 Septum formation inhibitor MinC, N-terminal domain Vag1382_08130 PF05166 YcgL domain Vag1382_08140 PF13406 Transglycosylase SLT domain Vag1382_08150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vag1382_08150 PF03466 LysR substrate binding domain Vag1382_08160 PF07670 Nucleoside recognition Vag1382_08160 PF07662 Na+ dependent nucleoside transporter C-terminus Vag1382_08160 PF01773 Na+ dependent nucleoside transporter N-terminus Vag1382_08170 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Vag1382_08170 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain Vag1382_08180 PF01209 ubiE/COQ5 methyltransferase family Vag1382_08190 PF00109 Beta-ketoacyl synthase, N-terminal domain Vag1382_08190 PF02801 Beta-ketoacyl synthase, C-terminal domain Vag1382_08210 PF07977 FabA-like domain Vag1382_08220 PF02801 Beta-ketoacyl synthase, C-terminal domain Vag1382_08220 PF00109 Beta-ketoacyl synthase, N-terminal domain Vag1382_08270 PF00221 Aromatic amino acid lyase Vag1382_08280 PF00535 Glycosyl transferase family 2 Vag1382_08290 PF07977 FabA-like domain Vag1382_08320 PF00550 Phosphopantetheine attachment site Vag1382_08330 PF00550 Phosphopantetheine attachment site Vag1382_08380 PF04820 Tryptophan halogenase Vag1382_08400 PF03471 Transporter associated domain Vag1382_08400 PF01595 Cyclin M transmembrane N-terminal domain Vag1382_08400 PF00571 CBS domain Vag1382_08410 PF00271 Helicase conserved C-terminal domain Vag1382_08410 PF00270 DEAD/DEAH box helicase Vag1382_08420 PF02254 TrkA-N domain Vag1382_08420 PF02080 TrkA-C domain Vag1382_08430 PF02386 Cation transport protein Vag1382_08460 PF02696 Uncharacterized ACR, YdiU/UPF0061 family Vag1382_08470 PF03480 Bacterial extracellular solute-binding protein, family 7 Vag1382_08480 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component Vag1382_08490 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Vag1382_08500 PF00158 Sigma-54 interaction domain Vag1382_08500 PF00072 Response regulator receiver domain Vag1382_08500 PF02954 Bacterial regulatory protein, Fis family Vag1382_08510 PF02743 Cache domain Vag1382_08510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vag1382_08510 PF00512 His Kinase A (phospho-acceptor) domain Vag1382_08520 PF05697 Bacterial trigger factor protein (TF) Vag1382_08520 PF05698 Bacterial trigger factor protein (TF) C-terminus Vag1382_08520 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Vag1382_08530 PF00574 Clp protease Vag1382_08540 PF06689 ClpX C4-type zinc finger Vag1382_08540 PF10431 C-terminal, D2-small domain, of ClpB protein Vag1382_08540 PF07724 AAA domain (Cdc48 subfamily) Vag1382_08550 PF00004 ATPase family associated with various cellular activities (AAA) Vag1382_08550 PF05362 Lon protease (S16) C-terminal proteolytic domain Vag1382_08550 PF02190 ATP-dependent protease La (LON) substrate-binding domain Vag1382_08560 PF00216 Bacterial DNA-binding protein Vag1382_08570 PF13145 PPIC-type PPIASE domain Vag1382_08610 PF01966 HD domain Vag1382_08610 PF13286 Phosphohydrolase-associated domain Vag1382_08630 PF00155 Aminotransferase class I and II Vag1382_08640 PF00425 chorismate binding enzyme Vag1382_08650 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Vag1382_08650 PF16582 Middle domain of thiamine pyrophosphate Vag1382_08650 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Vag1382_08660 PF12697 Alpha/beta hydrolase family Vag1382_08670 PF00378 Enoyl-CoA hydratase/isomerase Vag1382_08680 PF13378 Enolase C-terminal domain-like Vag1382_08690 PF13193 AMP-binding enzyme C-terminal domain Vag1382_08690 PF00501 AMP-binding enzyme Vag1382_08710 PF03601 Conserved hypothetical protein 698 Vag1382_08720 PF07690 Major Facilitator Superfamily Vag1382_08750 PF00529 HlyD membrane-fusion protein of T1SS Vag1382_08750 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Vag1382_08760 PF00873 AcrB/AcrD/AcrF family Vag1382_08800 PF00291 Pyridoxal-phosphate dependent enzyme Vag1382_08810 PF13404 AsnC-type helix-turn-helix domain Vag1382_08810 PF01037 Lrp/AsnC ligand binding domain Vag1382_08840 PF09619 Type III secretion system lipoprotein chaperone (YscW) Vag1382_08850 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain Vag1382_08870 PF00072 Response regulator receiver domain Vag1382_08870 PF00990 Diguanylate cyclase, GGDEF domain Vag1382_08880 PF01527 Transposase Vag1382_08890 PF00665 Integrase core domain Vag1382_08910 PF03466 LysR substrate binding domain Vag1382_08910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vag1382_08950 PF08240 Alcohol dehydrogenase GroES-like domain Vag1382_08950 PF00107 Zinc-binding dehydrogenase Vag1382_08980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vag1382_08980 PF03466 LysR substrate binding domain Vag1382_08990 PF12706 Beta-lactamase superfamily domain Vag1382_09000 PF12833 Helix-turn-helix domain Vag1382_09000 PF12852 Cupin Vag1382_09010 PF08032 RNA 2'-O ribose methyltransferase substrate binding Vag1382_09010 PF00588 SpoU rRNA Methylase family Vag1382_09020 PF00478 IMP dehydrogenase / GMP reductase domain Vag1382_09020 PF00571 CBS domain Vag1382_09030 PF00403 Heavy-metal-associated domain Vag1382_09040 PF01048 Phosphorylase superfamily Vag1382_09060 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Vag1382_09060 PF00672 HAMP domain Vag1382_09070 PF01230 HIT domain Vag1382_09100 PF08139 Prokaryotic membrane lipoprotein lipid attachment site Vag1382_09100 PF13036 Peptidoglycan-synthase activator LpoB Vag1382_09110 PF01636 Phosphotransferase enzyme family Vag1382_09120 PF05728 Uncharacterised protein family (UPF0227) Vag1382_09130 PF07992 Pyridine nucleotide-disulphide oxidoreductase Vag1382_09160 PF02559 CarD-like/TRCF domain Vag1382_09160 PF00270 DEAD/DEAH box helicase Vag1382_09160 PF00271 Helicase conserved C-terminal domain Vag1382_09160 PF17757 UvrB interaction domain Vag1382_09160 PF03461 TRCF domain Vag1382_09180 PF02687 FtsX-like permease family Vag1382_09180 PF12704 MacB-like periplasmic core domain Vag1382_09190 PF00005 ABC transporter Vag1382_09200 PF02687 FtsX-like permease family Vag1382_09200 PF12704 MacB-like periplasmic core domain Vag1382_09220 PF03772 Competence protein Vag1382_09220 PF13567 Domain of unknown function (DUF4131) Vag1382_09220 PF00753 Metallo-beta-lactamase superfamily Vag1382_09230 PF00005 ABC transporter Vag1382_09230 PF00664 ABC transporter transmembrane region Vag1382_09240 PF02606 Tetraacyldisaccharide-1-P 4'-kinase Vag1382_09250 PF03966 Trm112p-like protein Vag1382_09260 PF02348 Cytidylyltransferase Vag1382_09270 PF04293 SpoVR like protein Vag1382_09280 PF04285 Protein of unknown function (DUF444) Vag1382_09290 PF08298 PrkA AAA domain Vag1382_09290 PF06798 PrkA serine protein kinase C-terminal domain Vag1382_09300 PF03887 YfbU domain Vag1382_09320 PF04055 Radical SAM superfamily Vag1382_09340 PF02901 Pyruvate formate lyase-like Vag1382_09340 PF01228 Glycine radical Vag1382_09370 PF00005 ABC transporter Vag1382_09380 PF00497 Bacterial extracellular solute-binding proteins, family 3 Vag1382_09390 PF00528 Binding-protein-dependent transport system inner membrane component Vag1382_09400 PF00528 Binding-protein-dependent transport system inner membrane component Vag1382_09420 PF03372 Endonuclease/Exonuclease/phosphatase family Vag1382_09430 PF10689 Protein of unknown function (DUF2496) Vag1382_09440 PF07445 Primosomal replication protein priC Vag1382_09450 PF01925 Sulfite exporter TauE/SafE Vag1382_09460 PF06733 DEAD_2 Vag1382_09460 PF13307 Helicase C-terminal domain Vag1382_09480 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) Vag1382_09490 PF00849 RNA pseudouridylate synthase Vag1382_09500 PF03971 Monomeric isocitrate dehydrogenase Vag1382_09510 PF00313 'Cold-shock' DNA-binding domain Vag1382_09520 PF02617 ATP-dependent Clp protease adaptor protein ClpS Vag1382_09530 PF17871 AAA lid domain Vag1382_09530 PF00004 ATPase family associated with various cellular activities (AAA) Vag1382_09530 PF07724 AAA domain (Cdc48 subfamily) Vag1382_09530 PF10431 C-terminal, D2-small domain, of ClpB protein Vag1382_09530 PF02861 Clp amino terminal domain, pathogenicity island component Vag1382_09540 PF01176 Translation initiation factor 1A / IF-1 Vag1382_09550 PF04377 Arginine-tRNA-protein transferase, C terminus Vag1382_09550 PF04376 Arginine-tRNA-protein transferase, N terminus Vag1382_09560 PF03588 Leucyl/phenylalanyl-tRNA protein transferase Vag1382_09580 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Vag1382_09590 PF10692 Protein of unknown function (DUF2498) Vag1382_09600 PF01131 DNA topoisomerase Vag1382_09600 PF01751 Toprim domain Vag1382_09600 PF01396 Topoisomerase DNA binding C4 zinc finger Vag1382_09600 PF08272 Topoisomerase I zinc-ribbon-like Vag1382_09610 PF00483 Nucleotidyl transferase Vag1382_09620 PF00534 Glycosyl transferases group 1 Vag1382_09620 PF08323 Starch synthase catalytic domain Vag1382_09660 PF04994 TfoX C-terminal domain Vag1382_09660 PF04993 TfoX N-terminal domain Vag1382_09670 PF00356 Bacterial regulatory proteins, lacI family Vag1382_09680 PF02613 Nitrate reductase delta subunit Vag1382_09690 PF00072 Response regulator receiver domain Vag1382_09690 PF00486 Transcriptional regulatory protein, C terminal Vag1382_09700 PF02698 DUF218 domain Vag1382_09710 PF13847 Methyltransferase domain Vag1382_09720 PF17192 MukF middle domain Vag1382_09720 PF17193 MukF C-terminal domain Vag1382_09720 PF03882 MukF winged-helix domain Vag1382_09730 PF04288 MukE-like family Vag1382_09740 PF16330 MukB hinge domain Vag1382_09740 PF04310 MukB N-terminal Vag1382_09780 PF08443 RimK-like ATP-grasp domain Vag1382_09780 PF18030 RimK PreATP-grasp domain Vag1382_09790 PF08003 Protein of unknown function (DUF1698) Vag1382_09800 PF13649 Methyltransferase domain Vag1382_09810 PF01904 Protein of unknown function DUF72 Vag1382_09820 PF02938 GAD domain Vag1382_09820 PF01336 OB-fold nucleic acid binding domain Vag1382_09820 PF00152 tRNA synthetases class II (D, K and N) Vag1382_09830 PF01709 Transcriptional regulator Vag1382_09840 PF02075 Crossover junction endodeoxyribonuclease RuvC Vag1382_09850 PF07499 RuvA, C-terminal domain Vag1382_09850 PF01330 RuvA N terminal domain Vag1382_09860 PF17864 RuvB AAA lid domain Vag1382_09860 PF05496 Holliday junction DNA helicase RuvB P-loop domain Vag1382_09860 PF05491 RuvB C-terminal winged helix domain Vag1382_09870 PF01654 Cytochrome bd terminal oxidase subunit I Vag1382_09880 PF02322 Cytochrome bd terminal oxidase subunit II Vag1382_09890 PF08173 Membrane bound YbgT-like protein Vag1382_09910 PF03061 Thioesterase superfamily Vag1382_09920 PF01618 MotA/TolQ/ExbB proton channel family Vag1382_09930 PF02472 Biopolymer transport protein ExbD/TolR Vag1382_09950 PF07676 WD40-like Beta Propeller Repeat Vag1382_09950 PF04052 TolB amino-terminal domain Vag1382_09960 PF00691 OmpA family Vag1382_09970 PF13174 Tetratricopeptide repeat Vag1382_09970 PF16331 TolA binding protein trimerisation Vag1382_09980 PF02445 Quinolinate synthetase A protein Vag1382_10000 PF03994 Domain of Unknown Function (DUF350) Vag1382_10020 PF03738 Glutathionylspermidine synthase preATP-grasp Vag1382_10040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vag1382_10040 PF00512 His Kinase A (phospho-acceptor) domain Vag1382_10040 PF09308 LuxQ, periplasmic Vag1382_10040 PF00072 Response regulator receiver domain Vag1382_10050 PF06610 L-alanine exporter Vag1382_10060 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Vag1382_10060 PF00672 HAMP domain Vag1382_10070 PF00529 HlyD membrane-fusion protein of T1SS Vag1382_10070 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Vag1382_10080 PF00873 AcrB/AcrD/AcrF family Vag1382_10110 PF00579 tRNA synthetases class I (W and Y) Vag1382_10130 PF03372 Endonuclease/Exonuclease/phosphatase family Vag1382_10150 PF12729 Four helix bundle sensory module for signal transduction Vag1382_10150 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Vag1382_10150 PF00672 HAMP domain Vag1382_10160 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) Vag1382_10180 PF03466 LysR substrate binding domain Vag1382_10180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vag1382_10200 PF05222 Alanine dehydrogenase/PNT, N-terminal domain Vag1382_10200 PF01262 Alanine dehydrogenase/PNT, C-terminal domain Vag1382_10210 PF01037 Lrp/AsnC ligand binding domain Vag1382_10220 PF13491 4TM region of DNA translocase FtsK/SpoIIIE Vag1382_10220 PF17854 FtsK alpha domain Vag1382_10220 PF01580 FtsK/SpoIIIE family Vag1382_10220 PF09397 Ftsk gamma domain Vag1382_10230 PF03548 Outer membrane lipoprotein carrier protein LolA Vag1382_10240 PF12002 MgsA AAA+ ATPase C terminal Vag1382_10240 PF00004 ATPase family associated with various cellular activities (AAA) Vag1382_10240 PF16193 AAA C-terminal domain Vag1382_10250 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Vag1382_10250 PF02403 Seryl-tRNA synthetase N-terminal domain Vag1382_10280 PF00202 Aminotransferase class-III Vag1382_10290 PF04055 Radical SAM superfamily Vag1382_10290 PF06968 Biotin and Thiamin Synthesis associated domain Vag1382_10300 PF00155 Aminotransferase class I and II Vag1382_10310 PF08241 Methyltransferase domain Vag1382_10310 PF12697 Alpha/beta hydrolase family Vag1382_10340 PF01435 Peptidase family M48 Vag1382_10370 PF00106 short chain dehydrogenase Vag1382_10420 PF16036 Chalcone isomerase-like Vag1382_10440 PF00206 Lyase Vag1382_10440 PF08328 Adenylosuccinate lyase C-terminal Vag1382_10450 PF04356 Protein of unknown function (DUF489) Vag1382_10480 PF00294 pfkB family carbohydrate kinase Vag1382_10490 PF00816 H-NS histone family Vag1382_10500 PF03553 Na+/H+ antiporter family Vag1382_10510 PF02954 Bacterial regulatory protein, Fis family Vag1382_10510 PF00072 Response regulator receiver domain Vag1382_10510 PF00158 Sigma-54 interaction domain Vag1382_10520 PF01634 ATP phosphoribosyltransferase Vag1382_10520 PF08029 HisG, C-terminal domain Vag1382_10530 PF00815 Histidinol dehydrogenase Vag1382_10540 PF00155 Aminotransferase class I and II Vag1382_10550 PF08645 Polynucleotide kinase 3 phosphatase Vag1382_10550 PF00475 Imidazoleglycerol-phosphate dehydratase Vag1382_10560 PF00117 Glutamine amidotransferase class-I Vag1382_10570 PF00977 Histidine biosynthesis protein Vag1382_10580 PF00977 Histidine biosynthesis protein Vag1382_10590 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase Vag1382_10590 PF01502 Phosphoribosyl-AMP cyclohydrolase Vag1382_10620 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Vag1382_10620 PF00529 HlyD membrane-fusion protein of T1SS Vag1382_10630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vag1382_10630 PF03466 LysR substrate binding domain Vag1382_10670 PF00672 HAMP domain Vag1382_10670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vag1382_10670 PF00512 His Kinase A (phospho-acceptor) domain Vag1382_10680 PF00486 Transcriptional regulatory protein, C terminal Vag1382_10680 PF00072 Response regulator receiver domain Vag1382_10690 PF00672 HAMP domain Vag1382_10690 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Vag1382_10720 PF04055 Radical SAM superfamily Vag1382_10720 PF11842 Domain of unknown function (DUF3362) Vag1382_10720 PF08497 Radical SAM N-terminal Vag1382_10730 PF00563 EAL domain Vag1382_10730 PF08448 PAS fold Vag1382_10730 PF08447 PAS fold Vag1382_10730 PF00990 Diguanylate cyclase, GGDEF domain Vag1382_10760 PF03466 LysR substrate binding domain Vag1382_10760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vag1382_10770 PF08267 Cobalamin-independent synthase, N-terminal domain Vag1382_10770 PF01717 Cobalamin-independent synthase, Catalytic domain Vag1382_10790 PF03795 YCII-related domain Vag1382_10800 PF03061 Thioesterase superfamily Vag1382_10810 PF04279 Intracellular septation protein A Vag1382_10830 PF00072 Response regulator receiver domain Vag1382_10830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vag1382_10840 PF17327 Acyl homoserine lactone synthase Vag1382_10850 PF00375 Sodium:dicarboxylate symporter family Vag1382_10860 PF00501 AMP-binding enzyme Vag1382_10860 PF13193 AMP-binding enzyme C-terminal domain Vag1382_10870 PF00027 Cyclic nucleotide-binding domain Vag1382_10870 PF13545 Crp-like helix-turn-helix domain Vag1382_10880 PF00290 Tryptophan synthase alpha chain Vag1382_10890 PF00291 Pyridoxal-phosphate dependent enzyme Vag1382_10900 PF00218 Indole-3-glycerol phosphate synthase Vag1382_10900 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase Vag1382_10910 PF02885 Glycosyl transferase family, helical bundle domain Vag1382_10910 PF00591 Glycosyl transferase family, a/b domain Vag1382_10920 PF00117 Glutamine amidotransferase class-I Vag1382_10930 PF04715 Anthranilate synthase component I, N terminal region Vag1382_10930 PF00425 chorismate binding enzyme Vag1382_10940 PF08056 Tryptophan operon leader peptide Vag1382_10950 PF02811 PHP domain Vag1382_10960 PF01300 Telomere recombination Vag1382_10990 PF01479 S4 domain Vag1382_10990 PF00849 RNA pseudouridylate synthase Vag1382_11000 PF04269 Protein of unknown function, DUF440 Vag1382_11010 PF08207 Elongation factor P (EF-P) KOW-like domain Vag1382_11010 PF01132 Elongation factor P (EF-P) OB domain Vag1382_11010 PF09285 Elongation factor P, C-terminal Vag1382_11030 PF00136 DNA polymerase family B Vag1382_11030 PF03104 DNA polymerase family B, exonuclease domain Vag1382_11040 PF00072 Response regulator receiver domain Vag1382_11040 PF00196 Bacterial regulatory proteins, luxR family Vag1382_11050 PF01541 GIY-YIG catalytic domain Vag1382_11050 PF08459 UvrC Helix-hairpin-helix N-terminal Vag1382_11050 PF02151 UvrB/uvrC motif Vag1382_11060 PF01066 CDP-alcohol phosphatidyltransferase Vag1382_11070 PF00202 Aminotransferase class-III Vag1382_11080 PF16653 Saccharopine dehydrogenase C-terminal domain Vag1382_11080 PF03435 Saccharopine dehydrogenase NADP binding domain Vag1382_11090 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain Vag1382_11120 PF00994 Probable molybdopterin binding domain Vag1382_11140 PF00268 Ribonucleotide reductase, small chain Vag1382_11150 PF00317 Ribonucleotide reductase, all-alpha domain Vag1382_11150 PF02867 Ribonucleotide reductase, barrel domain Vag1382_11150 PF03477 ATP cone domain Vag1382_11180 PF00521 DNA gyrase/topoisomerase IV, subunit A Vag1382_11180 PF03989 DNA gyrase C-terminal domain, beta-propeller Vag1382_11210 PF02335 Cytochrome c552 Vag1382_11230 PF13247 4Fe-4S dicluster domain Vag1382_11240 PF03916 Polysulphide reductase, NrfD Vag1382_11250 PF01578 Cytochrome C assembly protein Vag1382_11250 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal Vag1382_11260 PF08534 Redoxin Vag1382_11270 PF03918 Cytochrome C biogenesis protein Vag1382_11290 PF00925 GTP cyclohydrolase II Vag1382_11340 PF01471 Putative peptidoglycan binding domain Vag1382_11340 PF03734 L,D-transpeptidase catalytic domain Vag1382_11350 PF05951 Bacterial protein of unknown function (DUF882) Vag1382_11360 PF00753 Metallo-beta-lactamase superfamily Vag1382_11390 PF03480 Bacterial extracellular solute-binding protein, family 7 Vag1382_11410 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Vag1382_11420 PF17200 Single Cache domain 2 Vag1382_11420 PF07730 Histidine kinase Vag1382_11430 PF00072 Response regulator receiver domain Vag1382_11430 PF00196 Bacterial regulatory proteins, luxR family Vag1382_11450 PF02028 BCCT, betaine/carnitine/choline family transporter Vag1382_11460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Vag1382_11460 PF00672 HAMP domain Vag1382_11500 PF00155 Aminotransferase class I and II Vag1382_11530 PF00155 Aminotransferase class I and II Vag1382_11530 PF00392 Bacterial regulatory proteins, gntR family Vag1382_11550 PF00152 tRNA synthetases class II (D, K and N) Vag1382_11550 PF01336 OB-fold nucleic acid binding domain Vag1382_11560 PF00672 HAMP domain Vag1382_11560 PF17200 Single Cache domain 2 Vag1382_11560 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Vag1382_11580 PF01242 6-pyruvoyl tetrahydropterin synthase Vag1382_11600 PF00563 EAL domain Vag1382_11600 PF04940 Sensors of blue-light using FAD Vag1382_11610 PF03315 Serine dehydratase beta chain Vag1382_11610 PF03313 Serine dehydratase alpha chain Vag1382_11620 PF03222 Tryptophan/tyrosine permease family Vag1382_11630 PF00293 NUDIX domain Vag1382_11650 PF00512 His Kinase A (phospho-acceptor) domain Vag1382_11650 PF09308 LuxQ, periplasmic Vag1382_11650 PF00072 Response regulator receiver domain Vag1382_11650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vag1382_11660 PF00425 chorismate binding enzyme Vag1382_11660 PF04715 Anthranilate synthase component I, N terminal region Vag1382_11690 PF04317 YcjX-like family, DUF463 Vag1382_11700 PF05128 Domain of unknown function (DUF697) Vag1382_11710 PF00158 Sigma-54 interaction domain Vag1382_11710 PF18024 Helix-turn-helix domain Vag1382_11720 PF13302 Acetyltransferase (GNAT) domain Vag1382_11750 PF00589 Phage integrase family Vag1382_11750 PF13495 Phage integrase, N-terminal SAM-like domain Vag1382_12150 PF00665 Integrase core domain Vag1382_12160 PF01527 Transposase Vag1382_12170 PF17243 POTRA domain TamA domain 1 Vag1382_12170 PF07244 Surface antigen variable number repeat Vag1382_12170 PF01103 Surface antigen Vag1382_12180 PF13091 PLD-like domain Vag1382_12190 PF00135 Carboxylesterase family Vag1382_12240 PF13533 Biotin-lipoyl like Vag1382_12260 PF06826 Predicted Permease Membrane Region Vag1382_12260 PF02080 TrkA-C domain Vag1382_12270 PF00155 Aminotransferase class I and II Vag1382_12280 PF08543 Phosphomethylpyrimidine kinase Vag1382_12310 PF03466 LysR substrate binding domain Vag1382_12310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vag1382_12370 PF13361 UvrD-like helicase C-terminal domain Vag1382_12370 PF12462 DNA helicase IV / RNA helicase N terminal Vag1382_12370 PF00580 UvrD/REP helicase N-terminal domain Vag1382_12380 PF00665 Integrase core domain Vag1382_12400 PF13099 Domain of unknown function (DUF3944) Vag1382_12400 PF03981 Ubiquinol-cytochrome C chaperone Vag1382_12470 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system Vag1382_12480 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA Vag1382_12550 PF13533 Biotin-lipoyl like Vag1382_12580 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Vag1382_12610 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain Vag1382_12610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vag1382_12610 PF17203 Single cache domain 3 Vag1382_12610 PF00989 PAS fold Vag1382_12620 PF12431 Transcriptional regulator Vag1382_12620 PF00072 Response regulator receiver domain Vag1382_12630 PF00593 TonB dependent receptor Vag1382_12630 PF07715 TonB-dependent Receptor Plug Domain Vag1382_12640 PF12833 Helix-turn-helix domain Vag1382_12650 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain Vag1382_12650 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain Vag1382_12660 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase Vag1382_12670 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain Vag1382_12670 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase Vag1382_12700 PF02954 Bacterial regulatory protein, Fis family Vag1382_12700 PF01590 GAF domain Vag1382_12700 PF00158 Sigma-54 interaction domain Vag1382_12710 PF00171 Aldehyde dehydrogenase family Vag1382_12750 PF12833 Helix-turn-helix domain Vag1382_12780 PF00263 Bacterial type II and III secretion system protein Vag1382_12780 PF03958 Bacterial type II/III secretion system short domain Vag1382_12790 PF16693 Inner membrane component of T3SS, periplasmic domain Vag1382_12790 PF16697 Inner membrane component of T3SS, cytoplasmic domain Vag1382_12810 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF Vag1382_12820 PF09477 Bacterial type II secretion system chaperone protein (type_III_yscG) Vag1382_12840 PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI Vag1382_12850 PF01514 Secretory protein of YscJ/FliF family Vag1382_12870 PF02108 Flagellar assembly protein FliH Vag1382_12890 PF02661 Fic/DOC family Vag1382_12970 PF13533 Biotin-lipoyl like Vag1382_12990 PF00440 Bacterial regulatory proteins, tetR family Vag1382_12990 PF08360 QacR-like protein, C-terminal region Vag1382_13000 PF01312 FlhB HrpN YscU SpaS Family Vag1382_13010 PF01311 Bacterial export proteins, family 1 Vag1382_13020 PF01313 Bacterial export proteins, family 3 Vag1382_13030 PF00813 FliP family Vag1382_13040 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term Vag1382_13070 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Vag1382_13070 PF02874 ATP synthase alpha/beta family, beta-barrel domain Vag1382_13070 PF18269 T3SS EscN ATPase C-terminal domain Vag1382_13090 PF09059 TyeA Vag1382_13130 PF00771 FHIPEP family Vag1382_13140 PF09621 Type III secretion system regulator (LcrR) Vag1382_13160 PF04792 V antigen (LcrV) protein Vag1382_13170 PF07720 Tetratricopeptide repeat Vag1382_13190 PF05844 YopD protein Vag1382_13210 PF16868 NMT1-like family Vag1382_13220 PF01925 Sulfite exporter TauE/SafE Vag1382_13240 PF01970 Tripartite tricarboxylate transporter TctA family Vag1382_13300 PF00285 Citrate synthase, C-terminal domain Vag1382_13310 PF00694 Aconitase C-terminal domain Vag1382_13310 PF00330 Aconitase family (aconitate hydratase) Vag1382_13320 PF04303 PrpF protein Vag1382_13330 PF00501 AMP-binding enzyme Vag1382_13330 PF16177 Acetyl-coenzyme A synthetase N-terminus Vag1382_13330 PF13193 AMP-binding enzyme C-terminal domain Vag1382_13350 PF00089 Trypsin Vag1382_13380 PF04055 Radical SAM superfamily Vag1382_13390 PF06508 Queuosine biosynthesis protein QueC Vag1382_13400 PF07694 5TMR of 5TMR-LYT Vag1382_13400 PF00990 Diguanylate cyclase, GGDEF domain Vag1382_13420 PF05736 OprF membrane domain Vag1382_13420 PF00691 OmpA family Vag1382_13450 PF05736 OprF membrane domain Vag1382_13450 PF00691 OmpA family Vag1382_13480 PF17785 PUA-like domain Vag1382_13480 PF10672 S-adenosylmethionine-dependent methyltransferase Vag1382_13490 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Vag1382_13490 PF00672 HAMP domain Vag1382_13490 PF02743 Cache domain Vag1382_13500 PF00708 Acylphosphatase Vag1382_13510 PF04358 DsrC like protein Vag1382_13530 PF01027 Inhibitor of apoptosis-promoting Bax1 Vag1382_13540 PF00005 ABC transporter Vag1382_13550 PF00528 Binding-protein-dependent transport system inner membrane component Vag1382_13560 PF00528 Binding-protein-dependent transport system inner membrane component Vag1382_13570 PF00497 Bacterial extracellular solute-binding proteins, family 3 Vag1382_13580 PF14824 Sirohaem biosynthesis protein central Vag1382_13580 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Vag1382_13580 PF10414 Sirohaem synthase dimerisation region Vag1382_13590 PF04461 Protein of unknown function (DUF520) Vag1382_13600 PF00793 DAHP synthetase I family Vag1382_13640 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF Vag1382_13640 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF Vag1382_13640 PF01189 16S rRNA methyltransferase RsmB/F Vag1382_13650 PF02470 MlaD protein Vag1382_13660 PF04403 Paraquat-inducible protein A Vag1382_13670 PF00664 ABC transporter transmembrane region Vag1382_13670 PF00005 ABC transporter Vag1382_13680 PF13185 GAF domain Vag1382_13690 PF17516 ProQ C-terminal domain Vag1382_13690 PF04352 ProQ/FINO family Vag1382_13700 PF03572 Peptidase family S41 Vag1382_13700 PF00595 PDZ domain Vag1382_13700 PF11818 C-terminal domain of tail specific protease (DUF3340) Vag1382_13700 PF17804 Tail specific protease N-terminal domain Vag1382_13720 PF01433 Peptidase family M1 domain Vag1382_13720 PF11940 Domain of unknown function (DUF3458) Ig-like fold Vag1382_13720 PF17432 Domain of unknown function (DUF3458_C) ARM repeats Vag1382_13740 PF05088 Bacterial NAD-glutamate dehydrogenase Vag1382_13750 PF01180 Dihydroorotate dehydrogenase Vag1382_13760 PF07126 Cell-division protein ZapC Vag1382_13770 PF01170 Putative RNA methylase family UPF0020 Vag1382_13770 PF02926 THUMP domain Vag1382_13770 PF10672 S-adenosylmethionine-dependent methyltransferase Vag1382_13810 PF04957 Ribosome modulation factor Vag1382_13820 PF07977 FabA-like domain Vag1382_13830 PF13654 AAA domain Vag1382_13830 PF05362 Lon protease (S16) C-terminal proteolytic domain Vag1382_13840 PF06303 MatP N-terminal domain Vag1382_13840 PF17414 MatP C-terminal ribbon-helix-helix domain Vag1382_13900 PF05840 Bacteriophage replication gene A protein (GPA) Vag1382_14110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vag1382_14110 PF00512 His Kinase A (phospho-acceptor) domain Vag1382_14110 PF09308 LuxQ, periplasmic Vag1382_14110 PF00072 Response regulator receiver domain Vag1382_14140 PF00115 Cytochrome C and Quinol oxidase polypeptide I Vag1382_14170 PF13442 Cytochrome C oxidase, cbb3-type, subunit III Vag1382_14170 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP Vag1382_14190 PF00403 Heavy-metal-associated domain Vag1382_14220 PF00027 Cyclic nucleotide-binding domain Vag1382_14220 PF13545 Crp-like helix-turn-helix domain Vag1382_14230 PF00582 Universal stress protein family Vag1382_14240 PF01171 PP-loop family Vag1382_14280 PF08402 TOBE domain Vag1382_14280 PF00005 ABC transporter Vag1382_14290 PF00528 Binding-protein-dependent transport system inner membrane component Vag1382_14300 PF00528 Binding-protein-dependent transport system inner membrane component Vag1382_14310 PF13416 Bacterial extracellular solute-binding protein Vag1382_14320 PF13416 Bacterial extracellular solute-binding protein Vag1382_14330 PF02146 Sir2 family Vag1382_14350 PF00909 Ammonium Transporter Family Vag1382_14400 PF13247 4Fe-4S dicluster domain Vag1382_14410 PF01568 Molydopterin dinucleotide binding domain Vag1382_14410 PF00384 Molybdopterin oxidoreductase Vag1382_14410 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Vag1382_14430 PF02613 Nitrate reductase delta subunit Vag1382_14470 PF02634 FdhD/NarQ family Vag1382_14490 PF12848 ABC transporter Vag1382_14490 PF00005 ABC transporter Vag1382_14500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vag1382_14500 PF00512 His Kinase A (phospho-acceptor) domain Vag1382_14510 PF00158 Sigma-54 interaction domain Vag1382_14510 PF00072 Response regulator receiver domain Vag1382_14510 PF02954 Bacterial regulatory protein, Fis family Vag1382_14520 PF12849 PBP superfamily domain Vag1382_14530 PF00528 Binding-protein-dependent transport system inner membrane component Vag1382_14540 PF08402 TOBE domain Vag1382_14540 PF00005 ABC transporter Vag1382_14550 PF12804 MobA-like NTP transferase domain Vag1382_14560 PF00994 Probable molybdopterin binding domain Vag1382_14560 PF03454 MoeA C-terminal region (domain IV) Vag1382_14560 PF03453 MoeA N-terminal region (domain I and II) Vag1382_14580 PF00480 ROK family Vag1382_14640 PF02743 Cache domain Vag1382_14640 PF00672 HAMP domain Vag1382_14640 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Vag1382_14650 PF00877 NlpC/P60 family Vag1382_14670 PF00990 Diguanylate cyclase, GGDEF domain Vag1382_14670 PF05230 MASE2 domain Vag1382_14680 PF00072 Response regulator receiver domain Vag1382_14680 PF01339 CheB methylesterase Vag1382_14690 PF03881 Fructosamine kinase Vag1382_14710 PF00677 Lumazine binding domain Vag1382_14720 PF01554 MatE Vag1382_14740 PF01068 ATP dependent DNA ligase domain Vag1382_14740 PF14743 DNA ligase OB-like domain Vag1382_14750 PF01740 STAS domain Vag1382_14770 PF02563 Polysaccharide biosynthesis/export protein Vag1382_14770 PF10531 SLBB domain Vag1382_14800 PF00158 Sigma-54 interaction domain Vag1382_14800 PF00072 Response regulator receiver domain Vag1382_14800 PF02954 Bacterial regulatory protein, Fis family Vag1382_14810 PF13439 Glycosyltransferase Family 4 Vag1382_14810 PF00534 Glycosyl transferases group 1 Vag1382_14820 PF00534 Glycosyl transferases group 1 Vag1382_14820 PF13439 Glycosyltransferase Family 4 Vag1382_14880 PF00534 Glycosyl transferases group 1 Vag1382_14880 PF13439 Glycosyltransferase Family 4 Vag1382_14900 PF02397 Bacterial sugar transferase Vag1382_14920 PF02028 BCCT, betaine/carnitine/choline family transporter Vag1382_14950 PF00271 Helicase conserved C-terminal domain Vag1382_14950 PF11898 Domain of unknown function (DUF3418) Vag1382_14950 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold Vag1382_14950 PF00270 DEAD/DEAH box helicase Vag1382_14950 PF04408 Helicase associated domain (HA2) Vag1382_14960 PF02525 Flavodoxin-like fold Vag1382_15030 PF00990 Diguanylate cyclase, GGDEF domain Vag1382_15050 PF00012 Hsp70 protein Vag1382_15060 PF00012 Hsp70 protein Vag1382_15100 PF07963 Prokaryotic N-terminal methylation motif Vag1382_15100 PF14245 Type IV pilin PilA Vag1382_15110 PF00664 ABC transporter transmembrane region Vag1382_15110 PF00005 ABC transporter Vag1382_15120 PF00664 ABC transporter transmembrane region Vag1382_15120 PF00005 ABC transporter Vag1382_15140 PF00593 TonB dependent receptor Vag1382_15140 PF07715 TonB-dependent Receptor Plug Domain Vag1382_15150 PF07715 TonB-dependent Receptor Plug Domain Vag1382_15150 PF00593 TonB dependent receptor Vag1382_15160 PF01032 FecCD transport family Vag1382_15170 PF01497 Periplasmic binding protein Vag1382_15180 PF00005 ABC transporter Vag1382_15210 PF03222 Tryptophan/tyrosine permease family Vag1382_15220 PF00465 Iron-containing alcohol dehydrogenase Vag1382_15230 PF01966 HD domain Vag1382_15250 PF03741 Integral membrane protein TerC family Vag1382_15270 PF04055 Radical SAM superfamily Vag1382_15280 PF11230 Protein of unknown function (DUF3029) Vag1382_15290 PF01810 LysE type translocator Vag1382_15300 PF01966 HD domain Vag1382_15300 PF11871 Domain of unknown function (DUF3391) Vag1382_15310 PF00563 EAL domain Vag1382_15310 PF00990 Diguanylate cyclase, GGDEF domain Vag1382_15310 PF03707 Bacterial signalling protein N terminal repeat Vag1382_15320 PF02954 Bacterial regulatory protein, Fis family Vag1382_15320 PF00072 Response regulator receiver domain Vag1382_15320 PF00158 Sigma-54 interaction domain Vag1382_15330 PF00512 His Kinase A (phospho-acceptor) domain Vag1382_15330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vag1382_15340 PF00939 Sodium:sulfate symporter transmembrane region Vag1382_15380 PF00072 Response regulator receiver domain Vag1382_15380 PF00990 Diguanylate cyclase, GGDEF domain Vag1382_15390 PF03928 Haem-degrading Vag1382_15400 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Vag1382_15400 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Vag1382_15440 PF13186 Iron-sulfur cluster-binding domain Vag1382_15440 PF04055 Radical SAM superfamily Vag1382_15450 PF03781 Sulfatase-modifying factor enzyme 1 Vag1382_15480 PF00884 Sulfatase Vag1382_15490 PF13840 ACT domain Vag1382_15490 PF00696 Amino acid kinase family Vag1382_15500 PF06339 Ectoine synthase Vag1382_15510 PF00202 Aminotransferase class-III Vag1382_15520 PF00583 Acetyltransferase (GNAT) family Vag1382_15530 PF02028 BCCT, betaine/carnitine/choline family transporter Vag1382_15560 PF00005 ABC transporter Vag1382_15560 PF00571 CBS domain Vag1382_15570 PF00528 Binding-protein-dependent transport system inner membrane component Vag1382_15580 PF04069 Substrate binding domain of ABC-type glycine betaine transport system Vag1382_15600 PF00501 AMP-binding enzyme Vag1382_15640 PF00486 Transcriptional regulatory protein, C terminal Vag1382_15640 PF00072 Response regulator receiver domain Vag1382_15650 PF00512 His Kinase A (phospho-acceptor) domain Vag1382_15650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vag1382_15650 PF08521 Two-component sensor kinase N-terminal Vag1382_15660 PF00884 Sulfatase Vag1382_15670 PF00665 Integrase core domain Vag1382_15680 PF01527 Transposase Vag1382_15740 PF01235 Sodium:alanine symporter family Vag1382_15760 PF01810 LysE type translocator Vag1382_15770 PF02074 Carboxypeptidase Taq (M32) metallopeptidase Vag1382_15820 PF13411 MerR HTH family regulatory protein Vag1382_15840 PF03193 RsgA GTPase Vag1382_15870 PF00717 Peptidase S24-like Vag1382_15880 PF11799 impB/mucB/samB family C-terminal domain Vag1382_15880 PF11798 IMS family HHH motif Vag1382_15880 PF13438 Domain of unknown function (DUF4113) Vag1382_15880 PF00817 impB/mucB/samB family Vag1382_15890 PF01926 50S ribosome-binding GTPase Vag1382_15890 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal Vag1382_15900 PF01926 50S ribosome-binding GTPase Vag1382_15920 PF01926 50S ribosome-binding GTPase Vag1382_15920 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal Vag1382_15990 PF02601 Exonuclease VII, large subunit Vag1382_15990 PF13742 OB-fold nucleic acid binding domain Vag1382_16040 PF00005 ABC transporter Vag1382_16080 PF00271 Helicase conserved C-terminal domain Vag1382_16080 PF00176 SNF2 family N-terminal domain Vag1382_16080 PF12419 SNF2 Helicase protein Vag1382_16100 PF02223 Thymidylate kinase Vag1382_16170 PF13408 Recombinase zinc beta ribbon domain Vag1382_16170 PF00239 Resolvase, N terminal domain Vag1382_16170 PF07508 Recombinase Vag1382_16180 PF02074 Carboxypeptidase Taq (M32) metallopeptidase Vag1382_16190 PF03279 Bacterial lipid A biosynthesis acyltransferase Vag1382_16210 PF13520 Amino acid permease Vag1382_16220 PF00893 Small Multidrug Resistance protein Vag1382_16240 PF04204 Homoserine O-succinyltransferase Vag1382_16270 PF00990 Diguanylate cyclase, GGDEF domain Vag1382_16270 PF03707 Bacterial signalling protein N terminal repeat Vag1382_16270 PF00563 EAL domain Vag1382_16280 PF00672 HAMP domain Vag1382_16280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vag1382_16280 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) Vag1382_16280 PF00512 His Kinase A (phospho-acceptor) domain Vag1382_16280 PF00072 Response regulator receiver domain Vag1382_16280 PF01627 Hpt domain Vag1382_16310 PF00132 Bacterial transferase hexapeptide (six repeats) Vag1382_16310 PF12464 Maltose acetyltransferase Vag1382_16340 PF04237 YjbR Vag1382_16350 PF01047 MarR family Vag1382_16370 PF00563 EAL domain Vag1382_16370 PF12792 CSS motif domain associated with EAL Vag1382_16420 PF14497 Glutathione S-transferase, C-terminal domain Vag1382_16420 PF02798 Glutathione S-transferase, N-terminal domain Vag1382_16440 PF04209 homogentisate 1,2-dioxygenase Vag1382_16450 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Vag1382_16460 PF07687 Peptidase dimerisation domain Vag1382_16460 PF01546 Peptidase family M20/M25/M40 Vag1382_16470 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Vag1382_16480 PF00528 Binding-protein-dependent transport system inner membrane component Vag1382_16490 PF00528 Binding-protein-dependent transport system inner membrane component Vag1382_16490 PF12911 N-terminal TM domain of oligopeptide transport permease C Vag1382_16500 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Vag1382_16500 PF00005 ABC transporter Vag1382_16510 PF00005 ABC transporter Vag1382_16510 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Vag1382_16530 PF08453 Peptidase family M9 N-terminal Vag1382_16530 PF01752 Collagenase Vag1382_16560 PF00528 Binding-protein-dependent transport system inner membrane component Vag1382_16570 PF00528 Binding-protein-dependent transport system inner membrane component Vag1382_16580 PF08402 TOBE domain Vag1382_16580 PF00005 ABC transporter Vag1382_16590 PF00701 Dihydrodipicolinate synthetase family Vag1382_16600 PF02423 Ornithine cyclodeaminase/mu-crystallin family Vag1382_16620 PF01266 FAD dependent oxidoreductase Vag1382_16620 PF05430 S-adenosyl-L-methionine-dependent methyltransferase Vag1382_16630 PF05544 Proline racemase Vag1382_16640 PF00171 Aldehyde dehydrogenase family Vag1382_16650 PF00392 Bacterial regulatory proteins, gntR family Vag1382_16690 PF05971 RNA methyltransferase Vag1382_16700 PF01863 Protein of unknown function DUF45 Vag1382_16720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vag1382_16720 PF03466 LysR substrate binding domain Vag1382_16760 PF00005 ABC transporter Vag1382_16770 PF01032 FecCD transport family Vag1382_16780 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family Vag1382_16810 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase Vag1382_16820 PF02654 Cobalamin-5-phosphate synthase Vag1382_16830 PF02277 Phosphoribosyltransferase Vag1382_16840 PF13460 NAD(P)H-binding Vag1382_16860 PF08411 Exonuclease C-terminal Vag1382_16860 PF00929 Exonuclease Vag1382_16870 PF03788 LrgA family Vag1382_16880 PF04172 LrgB-like family Vag1382_16890 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region Vag1382_16890 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Vag1382_16900 PF02222 ATP-grasp domain Vag1382_16910 PF05724 Thiopurine S-methyltransferase (TPMT) Vag1382_16930 PF00216 Bacterial DNA-binding protein Vag1382_16950 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain Vag1382_16950 PF03483 B3/4 domain Vag1382_16950 PF03484 tRNA synthetase B5 domain Vag1382_16950 PF03147 Ferredoxin-fold anticodon binding domain Vag1382_16950 PF01588 Putative tRNA binding domain Vag1382_16960 PF01409 tRNA synthetases class II core domain (F) Vag1382_16960 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain Vag1382_17020 PF01906 Putative heavy-metal-binding Vag1382_17030 PF00453 Ribosomal protein L20 Vag1382_17040 PF01632 Ribosomal protein L35 Vag1382_17050 PF05198 Translation initiation factor IF-3, N-terminal domain Vag1382_17050 PF00707 Translation initiation factor IF-3, C-terminal domain Vag1382_17060 PF02824 TGS domain Vag1382_17060 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Vag1382_17060 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Vag1382_17060 PF03129 Anticodon binding domain Vag1382_17090 PF00392 Bacterial regulatory proteins, gntR family Vag1382_17090 PF07702 UTRA domain Vag1382_17100 PF01979 Amidohydrolase family Vag1382_17110 PF00491 Arginase family Vag1382_17120 PF17392 Urocanase C-terminal domain Vag1382_17120 PF17391 Urocanase N-terminal domain Vag1382_17120 PF01175 Urocanase Rossmann-like domain Vag1382_17130 PF00221 Aromatic amino acid lyase Vag1382_17150 PF04191 Phospholipid methyltransferase Vag1382_17160 PF02913 FAD linked oxidases, C-terminal domain Vag1382_17160 PF01565 FAD binding domain Vag1382_17160 PF13183 4Fe-4S dicluster domain Vag1382_17190 PF00691 OmpA family Vag1382_17190 PF05736 OprF membrane domain Vag1382_17230 PF01259 SAICAR synthetase Vag1382_17240 PF09423 PhoD-like phosphatase Vag1382_17240 PF16655 PhoD-like phosphatase, N-terminal domain Vag1382_17260 PF00271 Helicase conserved C-terminal domain Vag1382_17260 PF08482 ATP-dependent helicase C-terminal Vag1382_17260 PF04408 Helicase associated domain (HA2) Vag1382_17260 PF00270 DEAD/DEAH box helicase Vag1382_17270 PF03949 Malic enzyme, NAD binding domain Vag1382_17270 PF00390 Malic enzyme, N-terminal domain Vag1382_17280 PF02698 DUF218 domain Vag1382_17290 PF00939 Sodium:sulfate symporter transmembrane region Vag1382_17300 PF00939 Sodium:sulfate symporter transmembrane region Vag1382_17320 PF00990 Diguanylate cyclase, GGDEF domain Vag1382_17320 PF00072 Response regulator receiver domain Vag1382_17340 PF00266 Aminotransferase class-V Vag1382_17360 PF07992 Pyridine nucleotide-disulphide oxidoreductase Vag1382_17370 PF00005 ABC transporter Vag1382_17370 PF00664 ABC transporter transmembrane region Vag1382_17380 PF00664 ABC transporter transmembrane region Vag1382_17380 PF00005 ABC transporter Vag1382_17400 PF00691 OmpA family Vag1382_17430 PF13953 PapC C-terminal domain Vag1382_17430 PF13954 PapC N-terminal domain Vag1382_17430 PF00577 Outer membrane usher protein Vag1382_17440 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain Vag1382_17440 PF02753 Pili assembly chaperone PapD, C-terminal domain Vag1382_17450 PF00419 Fimbrial protein Vag1382_17460 PF00266 Aminotransferase class-V Vag1382_17480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vag1382_17480 PF00512 His Kinase A (phospho-acceptor) domain Vag1382_17480 PF00497 Bacterial extracellular solute-binding proteins, family 3 Vag1382_17520 PF04993 TfoX N-terminal domain Vag1382_17520 PF04994 TfoX C-terminal domain Vag1382_17540 PF03956 Lysine exporter LysO Vag1382_17560 PF00282 Pyridoxal-dependent decarboxylase conserved domain Vag1382_17570 PF01418 Helix-turn-helix domain, rpiR family Vag1382_17570 PF01380 SIS domain Vag1382_17580 PF00465 Iron-containing alcohol dehydrogenase Vag1382_17590 PF00462 Glutaredoxin Vag1382_17600 PF06826 Predicted Permease Membrane Region Vag1382_17600 PF02080 TrkA-C domain Vag1382_17610 PF07055 Enoyl reductase FAD binding domain Vag1382_17610 PF12241 Trans-2-enoyl-CoA reductase catalytic region Vag1382_17610 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase Vag1382_17620 PF09317 Domain of unknown function (DUF1974) Vag1382_17620 PF02770 Acyl-CoA dehydrogenase, middle domain Vag1382_17620 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Vag1382_17620 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Vag1382_17630 PF00440 Bacterial regulatory proteins, tetR family Vag1382_17630 PF16295 Tetracyclin repressor-like, C-terminal domain Vag1382_17640 PF06965 Na+/H+ antiporter 1 Vag1382_17670 PF00005 ABC transporter Vag1382_17680 PF01554 MatE Vag1382_17690 PF13460 NAD(P)H-binding Vag1382_17690 PF11066 Protein of unknown function (DUF2867) Vag1382_17700 PF03264 NapC/NirT cytochrome c family, N-terminal region Vag1382_17730 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) Vag1382_17760 PF07690 Major Facilitator Superfamily Vag1382_17770 PF01479 S4 domain Vag1382_17770 PF00849 RNA pseudouridylate synthase Vag1382_17780 PF04851 Type III restriction enzyme, res subunit Vag1382_17780 PF00271 Helicase conserved C-terminal domain Vag1382_17800 PF00486 Transcriptional regulatory protein, C terminal Vag1382_17800 PF00072 Response regulator receiver domain Vag1382_17810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vag1382_17810 PF00672 HAMP domain Vag1382_17810 PF00512 His Kinase A (phospho-acceptor) domain Vag1382_17820 PF01386 Ribosomal L25p family Vag1382_17830 PF00583 Acetyltransferase (GNAT) family Vag1382_17840 PF02872 5'-nucleotidase, C-terminal domain Vag1382_17840 PF00149 Calcineurin-like phosphoesterase Vag1382_17870 PF13416 Bacterial extracellular solute-binding protein Vag1382_17880 PF00528 Binding-protein-dependent transport system inner membrane component Vag1382_17890 PF00005 ABC transporter Vag1382_17900 PF01066 CDP-alcohol phosphatidyltransferase Vag1382_17920 PF00158 Sigma-54 interaction domain Vag1382_17920 PF01590 GAF domain Vag1382_17930 PF03063 Prismane/CO dehydrogenase family Vag1382_17940 PF00970 Oxidoreductase FAD-binding domain Vag1382_17940 PF00175 Oxidoreductase NAD-binding domain Vag1382_17940 PF00111 2Fe-2S iron-sulfur cluster binding domain Vag1382_17960 PF00849 RNA pseudouridylate synthase Vag1382_17970 PF00209 Sodium:neurotransmitter symporter family Vag1382_17980 PF00209 Sodium:neurotransmitter symporter family Vag1382_17990 PF13396 Phospholipase_D-nuclease N-terminal Vag1382_17990 PF13091 PLD-like domain Vag1382_18000 PF01053 Cys/Met metabolism PLP-dependent enzyme Vag1382_18010 PF00561 alpha/beta hydrolase fold Vag1382_18020 PF03280 Proteobacterial lipase chaperone protein Vag1382_18030 PF03352 Methyladenine glycosylase Vag1382_18040 PF00873 AcrB/AcrD/AcrF family Vag1382_18050 PF13533 Biotin-lipoyl like Vag1382_18070 PF04024 PspC domain Vag1382_18080 PF06667 Phage shock protein B Vag1382_18090 PF04012 PspA/IM30 family Vag1382_18100 PF00158 Sigma-54 interaction domain Vag1382_18100 PF02954 Bacterial regulatory protein, Fis family Vag1382_18110 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Vag1382_18120 PF00528 Binding-protein-dependent transport system inner membrane component Vag1382_18130 PF12911 N-terminal TM domain of oligopeptide transport permease C Vag1382_18130 PF00528 Binding-protein-dependent transport system inner membrane component Vag1382_18140 PF00005 ABC transporter Vag1382_18140 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Vag1382_18150 PF00005 ABC transporter Vag1382_18170 PF01368 DHH family Vag1382_18170 PF02833 DHHA2 domain Vag1382_18190 PF16874 Glycosyl hydrolase family 36 C-terminal domain Vag1382_18190 PF16875 Glycosyl hydrolase family 36 N-terminal domain Vag1382_18200 PF00384 Molybdopterin oxidoreductase Vag1382_18200 PF01568 Molydopterin dinucleotide binding domain Vag1382_18200 PF18364 Molybdopterin oxidoreductase N-terminal domain Vag1382_18210 PF03264 NapC/NirT cytochrome c family, N-terminal region Vag1382_18220 PF06796 Periplasmic nitrate reductase protein NapE Vag1382_18230 PF03649 Uncharacterised protein family (UPF0014) Vag1382_18250 PF01226 Formate/nitrite transporter Vag1382_18300 PF02698 DUF218 domain Vag1382_18310 PF00265 Thymidine kinase Vag1382_18320 PF09190 DALR domain Vag1382_18320 PF01406 tRNA synthetases class I (C) catalytic domain Vag1382_18330 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Vag1382_18340 PF00149 Calcineurin-like phosphoesterase Vag1382_18350 PF08668 HDOD domain Vag1382_18350 PF00563 EAL domain Vag1382_18360 PF02810 SEC-C motif Vag1382_18380 PF01717 Cobalamin-independent synthase, Catalytic domain Vag1382_18380 PF08267 Cobalamin-independent synthase, N-terminal domain Vag1382_18420 PF12704 MacB-like periplasmic core domain Vag1382_18420 PF02687 FtsX-like permease family Vag1382_18420 PF00005 ABC transporter Vag1382_18430 PF00005 ABC transporter Vag1382_18430 PF02687 FtsX-like permease family Vag1382_18430 PF12704 MacB-like periplasmic core domain Vag1382_18440 PF12704 MacB-like periplasmic core domain Vag1382_18440 PF02687 FtsX-like permease family Vag1382_18440 PF00005 ABC transporter Vag1382_18460 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Vag1382_18490 PF05958 tRNA (Uracil-5-)-methyltransferase Vag1382_18490 PF01938 TRAM domain Vag1382_18510 PF00085 Thioredoxin Vag1382_18520 PF11412 Disulphide bond corrector protein DsbC Vag1382_18520 PF02683 Cytochrome C biogenesis protein transmembrane region Vag1382_18540 PF00072 Response regulator receiver domain Vag1382_18540 PF00196 Bacterial regulatory proteins, luxR family Vag1382_18550 PF00512 His Kinase A (phospho-acceptor) domain Vag1382_18550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vag1382_18560 PF13247 4Fe-4S dicluster domain Vag1382_18570 PF03916 Polysulphide reductase, NrfD Vag1382_18580 PF00384 Molybdopterin oxidoreductase Vag1382_18580 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Vag1382_18580 PF01568 Molydopterin dinucleotide binding domain Vag1382_18590 PF00034 Cytochrome c Vag1382_18600 PF13442 Cytochrome C oxidase, cbb3-type, subunit III Vag1382_18610 PF04403 Paraquat-inducible protein A Vag1382_18620 PF02470 MlaD protein Vag1382_18650 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Vag1382_18660 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family Vag1382_18670 PF18073 Rubredoxin metal binding domain Vag1382_18680 PF06305 Lipopolysaccharide assembly protein A domain Vag1382_18690 PF00216 Bacterial DNA-binding protein Vag1382_18700 PF00575 S1 RNA binding domain Vag1382_18710 PF02224 Cytidylate kinase Vag1382_18720 PF08496 Peptidase family S49 N-terminal Vag1382_18720 PF01343 Peptidase family S49 Vag1382_18730 PF00106 short chain dehydrogenase Vag1382_18760 PF17657 Bacterial DNA polymerase III alpha subunit finger domain Vag1382_18760 PF14579 Helix-hairpin-helix motif Vag1382_18760 PF02811 PHP domain Vag1382_18760 PF01336 OB-fold nucleic acid binding domain Vag1382_18760 PF07733 Bacterial DNA polymerase III alpha NTPase domain Vag1382_18770 PF01584 CheW-like domain Vag1382_18770 PF00072 Response regulator receiver domain Vag1382_18780 PF00480 ROK family Vag1382_18790 PF02887 Pyruvate kinase, alpha/beta domain Vag1382_18790 PF00224 Pyruvate kinase, barrel domain Vag1382_18800 PF01734 Patatin-like phospholipase Vag1382_18830 PF00209 Sodium:neurotransmitter symporter family Vag1382_18860 PF02378 Phosphotransferase system, EIIC Vag1382_18860 PF00367 phosphotransferase system, EIIB Vag1382_18870 PF01026 TatD related DNase Vag1382_18880 PF09115 DNA polymerase III, delta subunit, C terminal Vag1382_18890 PF02223 Thymidylate kinase Vag1382_18900 PF02618 YceG-like family Vag1382_18910 PF01063 Amino-transferase class IV Vag1382_18920 PF02801 Beta-ketoacyl synthase, C-terminal domain Vag1382_18920 PF00109 Beta-ketoacyl synthase, N-terminal domain Vag1382_18930 PF00550 Phosphopantetheine attachment site Vag1382_18950 PF00698 Acyl transferase domain Vag1382_18960 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal Vag1382_18960 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Vag1382_18970 PF02504 Fatty acid synthesis protein Vag1382_18980 PF01783 Ribosomal L32p protein family Vag1382_18990 PF02620 Large ribosomal RNA subunit accumulation protein YceD Vag1382_19000 PF02545 Maf-like protein Vag1382_19010 PF00849 RNA pseudouridylate synthase Vag1382_19010 PF01479 S4 domain Vag1382_19020 PF10150 Ribonuclease E/G family Vag1382_19020 PF00575 S1 RNA binding domain Vag1382_19020 PF12111 Polyribonucleotide phosphorylase C terminal Vag1382_19030 PF00916 Sulfate permease family Vag1382_19030 PF01740 STAS domain Vag1382_19040 PF01451 Low molecular weight phosphotyrosine protein phosphatase Vag1382_19050 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP Vag1382_19050 PF12557 Cob(I)alamin adenosyltransferase N terminal Vag1382_19070 PF00485 Phosphoribulokinase / Uridine kinase family Vag1382_19080 PF10609 NUBPL iron-transfer P-loop NTPase Vag1382_19090 PF01588 Putative tRNA binding domain Vag1382_19090 PF09334 tRNA synthetases class I (M) Vag1382_19120 PF00392 Bacterial regulatory proteins, gntR family Vag1382_19120 PF07840 FadR C-terminal domain Vag1382_19130 PF06450 Bacterial Na+/H+ antiporter B (NhaB) Vag1382_19140 PF02600 Disulfide bond formation protein DsbB Vag1382_19150 PF01043 SecA preprotein cross-linking domain Vag1382_19150 PF07517 SecA DEAD-like domain Vag1382_19150 PF02810 SEC-C motif Vag1382_19150 PF07516 SecA Wing and Scaffold domain Vag1382_19160 PF01207 Dihydrouridine synthase (Dus) Vag1382_19170 PF00990 Diguanylate cyclase, GGDEF domain Vag1382_19170 PF17158 Membrane-associated sensor, integral membrane domain Vag1382_19180 PF00128 Alpha amylase, catalytic domain Vag1382_19180 PF02903 Alpha amylase, N-terminal ig-like domain Vag1382_19190 PF00005 ABC transporter Vag1382_19200 PF02653 Branched-chain amino acid transport system / permease component Vag1382_19220 PF04217 Protein of unknown function, DUF412 Vag1382_19230 PF00871 Acetokinase family Vag1382_19240 PF01515 Phosphate acetyl/butaryl transferase Vag1382_19240 PF07085 DRTGG domain Vag1382_19250 PF13194 Domain of unknown function (DUF4010) Vag1382_19270 PF13409 Glutathione S-transferase, N-terminal domain Vag1382_19280 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Vag1382_19280 PF00005 ABC transporter Vag1382_19290 PF00005 ABC transporter Vag1382_19290 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Vag1382_19300 PF12911 N-terminal TM domain of oligopeptide transport permease C Vag1382_19300 PF00528 Binding-protein-dependent transport system inner membrane component Vag1382_19310 PF00528 Binding-protein-dependent transport system inner membrane component Vag1382_19320 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Vag1382_19330 PF02391 MoaE protein Vag1382_19340 PF02597 ThiS family Vag1382_19350 PF01967 MoaC family Vag1382_19360 PF00994 Probable molybdopterin binding domain Vag1382_19370 PF06463 Molybdenum Cofactor Synthesis C Vag1382_19370 PF04055 Radical SAM superfamily Vag1382_19380 PF01933 Uncharacterised protein family UPF0052 Vag1382_19390 PF01627 Hpt domain Vag1382_19400 PF00158 Sigma-54 interaction domain Vag1382_19400 PF00072 Response regulator receiver domain Vag1382_19400 PF02954 Bacterial regulatory protein, Fis family Vag1382_19410 PF04851 Type III restriction enzyme, res subunit Vag1382_19410 PF12344 Ultra-violet resistance protein B Vag1382_19410 PF00271 Helicase conserved C-terminal domain Vag1382_19410 PF02151 UvrB/uvrC motif Vag1382_19410 PF17757 UvrB interaction domain Vag1382_19420 PF02508 Rnf-Nqr subunit, membrane protein Vag1382_19430 PF04060 Putative Fe-S cluster Vag1382_19440 PF12838 4Fe-4S dicluster domain Vag1382_19440 PF13375 RnfC Barrel sandwich hybrid domain Vag1382_19440 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Vag1382_19440 PF10531 SLBB domain Vag1382_19450 PF03116 NQR2, RnfD, RnfE family Vag1382_19460 PF04205 FMN-binding domain Vag1382_19470 PF02508 Rnf-Nqr subunit, membrane protein Vag1382_19480 PF00633 Helix-hairpin-helix motif Vag1382_19480 PF10576 Iron-sulfur binding domain of endonuclease III Vag1382_19480 PF00730 HhH-GPD superfamily base excision DNA repair protein Vag1382_19490 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Vag1382_19500 PF10952 Protein of unknown function (DUF2753) Vag1382_19510 PF18393 MotY N-terminal domain Vag1382_19510 PF00691 OmpA family Vag1382_19530 PF00929 Exonuclease Vag1382_19540 PF13726 Na+-H+ antiporter family Vag1382_19540 PF03553 Na+/H+ antiporter family Vag1382_19560 PF00462 Glutaredoxin Vag1382_19570 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain Vag1382_19570 PF02777 Iron/manganese superoxide dismutases, C-terminal domain Vag1382_19600 PF00465 Iron-containing alcohol dehydrogenase Vag1382_19600 PF00171 Aldehyde dehydrogenase family Vag1382_19610 PF01914 MarC family integral membrane protein Vag1382_19620 PF00027 Cyclic nucleotide-binding domain Vag1382_19620 PF00520 Ion transport protein Vag1382_19630 PF02774 Semialdehyde dehydrogenase, dimerisation domain Vag1382_19630 PF01118 Semialdehyde dehydrogenase, NAD binding domain Vag1382_19640 PF03553 Na+/H+ antiporter family Vag1382_19670 PF04245 37-kD nucleoid-associated bacterial protein Vag1382_19680 PF07208 Protein of unknown function (DUF1414) Vag1382_19690 PF11893 Domain of unknown function (DUF3413) Vag1382_19690 PF00884 Sulfatase Vag1382_19700 PF00850 Histone deacetylase domain Vag1382_19710 PF00106 short chain dehydrogenase Vag1382_19730 PF01751 Toprim domain Vag1382_19730 PF01131 DNA topoisomerase Vag1382_19740 PF00881 Nitroreductase family Vag1382_19760 PF07992 Pyridine nucleotide-disulphide oxidoreductase Vag1382_19760 PF00724 NADH:flavin oxidoreductase / NADH oxidase family Vag1382_19770 PF01343 Peptidase family S49 Vag1382_19780 PF00710 Asparaginase, N-terminal Vag1382_19780 PF17763 Glutaminase/Asparaginase C-terminal domain Vag1382_19790 PF07023 Protein of unknown function (DUF1315) Vag1382_19810 PF01641 SelR domain Vag1382_19820 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Vag1382_19820 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Vag1382_19830 PF01263 Aldose 1-epimerase Vag1382_19840 PF02743 Cache domain Vag1382_19840 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Vag1382_19840 PF00672 HAMP domain Vag1382_19850 PF13847 Methyltransferase domain Vag1382_19880 PF00245 Alkaline phosphatase Vag1382_19900 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Vag1382_19910 PF03992 Antibiotic biosynthesis monooxygenase Vag1382_19920 PF05552 Conserved TM helix Vag1382_19920 PF00924 Mechanosensitive ion channel Vag1382_19930 PF03692 Putative zinc- or iron-chelating domain Vag1382_19940 PF04226 Transglycosylase associated protein Vag1382_19950 PF03692 Putative zinc- or iron-chelating domain Vag1382_19970 PF03313 Serine dehydratase alpha chain Vag1382_19980 PF01042 Endoribonuclease L-PSP Vag1382_20000 PF00230 Major intrinsic protein Vag1382_20010 PF13662 Toprim domain Vag1382_20010 PF02132 RecR protein Vag1382_20020 PF02575 YbaB/EbfC DNA-binding family Vag1382_20030 PF12169 DNA polymerase III subunits gamma and tau domain III Vag1382_20030 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding Vag1382_20030 PF12170 DNA polymerase III tau subunit V interacting with alpha Vag1382_20040 PF00156 Phosphoribosyl transferase domain Vag1382_20050 PF04304 Protein of unknown function (DUF454) Vag1382_20070 PF00072 Response regulator receiver domain Vag1382_20080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vag1382_20080 PF03466 LysR substrate binding domain Vag1382_20090 PF00156 Phosphoribosyl transferase domain Vag1382_20100 PF02674 Colicin V production protein Vag1382_20110 PF05036 Sporulation related domain Vag1382_20120 PF02875 Mur ligase family, glutamate ligase domain Vag1382_20120 PF08245 Mur ligase middle domain Vag1382_20130 PF17848 Acetyl-coA carboxylase zinc finger domain Vag1382_20130 PF01039 Carboxyl transferase domain Vag1382_20140 PF01416 tRNA pseudouridine synthase Vag1382_20160 PF02774 Semialdehyde dehydrogenase, dimerisation domain Vag1382_20160 PF01118 Semialdehyde dehydrogenase, NAD binding domain Vag1382_20170 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Vag1382_20170 PF11890 Domain of unknown function (DUF3410) Vag1382_20170 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Vag1382_20180 PF00109 Beta-ketoacyl synthase, N-terminal domain Vag1382_20180 PF02801 Beta-ketoacyl synthase, C-terminal domain Vag1382_20190 PF05430 S-adenosyl-L-methionine-dependent methyltransferase Vag1382_20190 PF01266 FAD dependent oxidoreductase Vag1382_20200 PF03358 NADPH-dependent FMN reductase Vag1382_20210 PF08891 YfcL protein Vag1382_20220 PF04315 Elongation factor P hydroxylase Vag1382_20230 PF03458 UPF0126 domain Vag1382_20240 PF01264 Chorismate synthase Vag1382_20250 PF05175 Methyltransferase small domain Vag1382_20260 PF01713 Smr domain Vag1382_20270 PF00300 Histidine phosphatase superfamily (branch 1) Vag1382_20280 PF00675 Insulinase (Peptidase family M16) Vag1382_20280 PF05193 Peptidase M16 inactive domain Vag1382_20280 PF16187 Middle or third domain of peptidase_M16 Vag1382_20300 PF00378 Enoyl-CoA hydratase/isomerase Vag1382_20300 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Vag1382_20300 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Vag1382_20310 PF02803 Thiolase, C-terminal domain Vag1382_20310 PF00108 Thiolase, N-terminal domain Vag1382_20320 PF04542 Sigma-70 region 2 Vag1382_20320 PF08281 Sigma-70, region 4 Vag1382_20340 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) Vag1382_20350 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) Vag1382_20360 PF04333 MlaA lipoprotein Vag1382_20370 PF03918 Cytochrome C biogenesis protein Vag1382_20380 PF03918 Cytochrome C biogenesis protein Vag1382_20390 PF08534 Redoxin Vag1382_20400 PF01578 Cytochrome C assembly protein Vag1382_20400 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal Vag1382_20410 PF03100 CcmE Vag1382_20420 PF04995 Heme exporter protein D (CcmD) Vag1382_20430 PF01578 Cytochrome C assembly protein Vag1382_20440 PF03379 CcmB protein Vag1382_20450 PF00005 ABC transporter Vag1382_20470 PF01584 CheW-like domain Vag1382_20490 PF13614 AAA domain Vag1382_20500 PF00072 Response regulator receiver domain Vag1382_20500 PF01339 CheB methylesterase Vag1382_20510 PF01627 Hpt domain Vag1382_20510 PF01584 CheW-like domain Vag1382_20510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vag1382_20510 PF00072 Response regulator receiver domain Vag1382_20510 PF02895 Signal transducing histidine kinase, homodimeric domain Vag1382_20520 PF04344 Chemotaxis phosphatase, CheZ Vag1382_20530 PF00072 Response regulator receiver domain Vag1382_20540 PF04539 Sigma-70 region 3 Vag1382_20540 PF04545 Sigma-70, region 4 Vag1382_20540 PF04542 Sigma-70 region 2 Vag1382_20550 PF10609 NUBPL iron-transfer P-loop NTPase Vag1382_20560 PF00448 SRP54-type protein, GTPase domain Vag1382_20570 PF00771 FHIPEP family Vag1382_20580 PF01312 FlhB HrpN YscU SpaS Family Vag1382_20590 PF01311 Bacterial export proteins, family 1 Vag1382_20600 PF01313 Bacterial export proteins, family 3 Vag1382_20610 PF00813 FliP family Vag1382_20620 PF04347 Flagellar biosynthesis protein, FliO Vag1382_20630 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term Vag1382_20640 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term Vag1382_20640 PF02154 Flagellar motor switch protein FliM Vag1382_20680 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Vag1382_20680 PF18269 T3SS EscN ATPase C-terminal domain Vag1382_20700 PF01706 FliG C-terminal domain Vag1382_20700 PF14841 FliG middle domain Vag1382_20700 PF14842 FliG N-terminal domain Vag1382_20710 PF01514 Secretory protein of YscJ/FliF family Vag1382_20710 PF08345 Flagellar M-ring protein C-terminal Vag1382_20720 PF02049 Flagellar hook-basal body complex protein FliE Vag1382_20730 PF02954 Bacterial regulatory protein, Fis family Vag1382_20730 PF00072 Response regulator receiver domain Vag1382_20730 PF00158 Sigma-54 interaction domain Vag1382_20740 PF00512 His Kinase A (phospho-acceptor) domain Vag1382_20740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vag1382_20750 PF02954 Bacterial regulatory protein, Fis family Vag1382_20750 PF06490 Flagellar regulatory protein FleQ Vag1382_20750 PF00158 Sigma-54 interaction domain Vag1382_20760 PF02561 Flagellar protein FliS Vag1382_20780 PF07196 Flagellin hook IN motif Vag1382_20780 PF07195 Flagellar hook-associated protein 2 C-terminus Vag1382_20780 PF02465 Flagellar hook-associated protein 2 N-terminus Vag1382_20790 PF03646 FlaG protein Vag1382_20800 PF00700 Bacterial flagellin C-terminal helical region Vag1382_20800 PF07196 Flagellin hook IN motif Vag1382_20800 PF00669 Bacterial flagellin N-terminal helical region Vag1382_20810 PF00669 Bacterial flagellin N-terminal helical region Vag1382_20810 PF00700 Bacterial flagellin C-terminal helical region Vag1382_20810 PF07196 Flagellin hook IN motif Vag1382_20820 PF00700 Bacterial flagellin C-terminal helical region Vag1382_20820 PF00669 Bacterial flagellin N-terminal helical region Vag1382_20820 PF07196 Flagellin hook IN motif Vag1382_20830 PF04261 Dyp-type peroxidase family Vag1382_20840 PF11143 Protein of unknown function (DUF2919) Vag1382_20880 PF03960 ArsC family Vag1382_20890 PF01546 Peptidase family M20/M25/M40 Vag1382_20890 PF07687 Peptidase dimerisation domain Vag1382_20930 PF00701 Dihydrodipicolinate synthetase family Vag1382_20950 PF00578 AhpC/TSA family Vag1382_20960 PF01594 AI-2E family transporter Vag1382_20980 PF01435 Peptidase family M48 Vag1382_20980 PF13181 Tetratricopeptide repeat Vag1382_20990 PF03960 ArsC family Vag1382_21000 PF03358 NADPH-dependent FMN reductase Vag1382_21030 PF00860 Permease family Vag1382_21050 PF02769 AIR synthase related protein, C-terminal domain Vag1382_21050 PF00586 AIR synthase related protein, N-terminal domain Vag1382_21060 PF00551 Formyl transferase Vag1382_21070 PF13230 Glutamine amidotransferases class-II Vag1382_21080 PF13580 SIS domain Vag1382_21090 PF09317 Domain of unknown function (DUF1974) Vag1382_21090 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Vag1382_21090 PF02770 Acyl-CoA dehydrogenase, middle domain Vag1382_21090 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Vag1382_21100 PF01740 STAS domain Vag1382_21100 PF00916 Sulfate permease family Vag1382_21150 PF00929 Exonuclease Vag1382_21160 PF00075 RNase H Vag1382_21170 PF08241 Methyltransferase domain Vag1382_21180 PF16123 Hydroxyacylglutathione hydrolase C-terminus Vag1382_21180 PF00753 Metallo-beta-lactamase superfamily Vag1382_21190 PF01464 Transglycosylase SLT domain Vag1382_21190 PF01476 LysM domain Vag1382_21210 PF03372 Endonuclease/Exonuclease/phosphatase family Vag1382_21220 PF00543 Nitrogen regulatory protein P-II Vag1382_21230 PF00034 Cytochrome c Vag1382_21240 PF01171 PP-loop family Vag1382_21240 PF09179 TilS substrate binding domain Vag1382_21240 PF11734 TilS substrate C-terminal domain Vag1382_21250 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit Vag1382_21260 PF01336 OB-fold nucleic acid binding domain Vag1382_21260 PF02811 PHP domain Vag1382_21260 PF07733 Bacterial DNA polymerase III alpha NTPase domain Vag1382_21260 PF14579 Helix-hairpin-helix motif Vag1382_21260 PF17657 Bacterial DNA polymerase III alpha subunit finger domain Vag1382_21270 PF01351 Ribonuclease HII Vag1382_21280 PF02684 Lipid-A-disaccharide synthetase Vag1382_21290 PF00132 Bacterial transferase hexapeptide (six repeats) Vag1382_21290 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 Vag1382_21300 PF07977 FabA-like domain Vag1382_21310 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD Vag1382_21310 PF00132 Bacterial transferase hexapeptide (six repeats) Vag1382_21320 PF03938 Outer membrane protein (OmpH-like) Vag1382_21330 PF07244 Surface antigen variable number repeat Vag1382_21330 PF01103 Surface antigen Vag1382_21340 PF17820 PDZ domain Vag1382_21340 PF02163 Peptidase family M50 Vag1382_21350 PF13288 DXP reductoisomerase C-terminal domain Vag1382_21350 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain Vag1382_21350 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase Vag1382_21370 PF01255 Putative undecaprenyl diphosphate synthase Vag1382_21380 PF01765 Ribosome recycling factor Vag1382_21390 PF00696 Amino acid kinase family Vag1382_21400 PF00889 Elongation factor TS Vag1382_21410 PF00318 Ribosomal protein S2 Vag1382_21420 PF00557 Metallopeptidase family M24 Vag1382_21430 PF01966 HD domain Vag1382_21430 PF01909 Nucleotidyltransferase domain Vag1382_21430 PF08335 GlnD PII-uridylyltransferase Vag1382_21430 PF01842 ACT domain Vag1382_21440 PF11944 Protein of unknown function (DUF3461) Vag1382_21450 PF00849 RNA pseudouridylate synthase Vag1382_21460 PF00849 RNA pseudouridylate synthase Vag1382_21460 PF04287 tRNA pseudouridine synthase C Vag1382_21510 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 Vag1382_21520 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal Vag1382_21520 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Vag1382_21530 PF01370 NAD dependent epimerase/dehydratase family Vag1382_21580 PF03806 AbgT putative transporter family Vag1382_21590 PF01197 Ribosomal protein L31 Vag1382_21600 PF18389 TrmO C-terminal domain Vag1382_21600 PF01980 tRNA-methyltransferase O Vag1382_21610 PF04073 Aminoacyl-tRNA editing domain Vag1382_21610 PF03129 Anticodon binding domain Vag1382_21610 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Vag1382_21630 PF06786 Uncharacterised protein family (UPF0253) Vag1382_21650 PF00209 Sodium:neurotransmitter symporter family Vag1382_21660 PF02018 Carbohydrate binding domain Vag1382_21660 PF00704 Glycosyl hydrolases family 18 Vag1382_21660 PF00041 Fibronectin type III domain Vag1382_21680 PF03449 Transcription elongation factor, N-terminal Vag1382_21680 PF01272 Transcription elongation factor, GreA/GreB, C-term Vag1382_21690 PF16124 RecQ zinc-binding Vag1382_21690 PF09382 RQC domain Vag1382_21690 PF00570 HRDC domain Vag1382_21690 PF00270 DEAD/DEAH box helicase Vag1382_21690 PF00271 Helicase conserved C-terminal domain Vag1382_21700 PF00817 impB/mucB/samB family Vag1382_21700 PF11799 impB/mucB/samB family C-terminal domain Vag1382_21700 PF11798 IMS family HHH motif Vag1382_21730 PF02424 ApbE family Vag1382_21740 PF00111 2Fe-2S iron-sulfur cluster binding domain Vag1382_21740 PF00970 Oxidoreductase FAD-binding domain Vag1382_21740 PF00175 Oxidoreductase NAD-binding domain Vag1382_21750 PF02508 Rnf-Nqr subunit, membrane protein Vag1382_21760 PF02508 Rnf-Nqr subunit, membrane protein Vag1382_21770 PF04205 FMN-binding domain Vag1382_21780 PF03116 NQR2, RnfD, RnfE family Vag1382_21790 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) Vag1382_21790 PF11973 NQRA C-terminal domain Vag1382_21800 PF01722 BolA-like protein Vag1382_21810 PF05175 Methyltransferase small domain Vag1382_21820 PF03923 Uncharacterized lipoprotein Vag1382_21820 PF08139 Prokaryotic membrane lipoprotein lipid attachment site Vag1382_21830 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Vag1382_21840 PF07690 Major Facilitator Superfamily Vag1382_21860 PF04542 Sigma-70 region 2 Vag1382_21860 PF04545 Sigma-70, region 4 Vag1382_21890 PF03502 Nucleoside-specific channel-forming protein, Tsx Vag1382_21900 PF08546 Ketopantoate reductase PanE/ApbA C terminal Vag1382_21900 PF02558 Ketopantoate reductase PanE/ApbA Vag1382_21910 PF01965 DJ-1/PfpI family Vag1382_21920 PF00266 Aminotransferase class-V Vag1382_21930 PF17158 Membrane-associated sensor, integral membrane domain Vag1382_21930 PF00990 Diguanylate cyclase, GGDEF domain Vag1382_21950 PF02657 Fe-S metabolism associated domain Vag1382_21960 PF00899 ThiF family Vag1382_21970 PF03562 MltA specific insert domain Vag1382_21970 PF06725 3D domain Vag1382_21990 PF00583 Acetyltransferase (GNAT) family Vag1382_21990 PF00696 Amino acid kinase family Vag1382_22030 PF13538 UvrD-like helicase C-terminal domain Vag1382_22040 PF12705 PD-(D/E)XK nuclease superfamily Vag1382_22040 PF13361 UvrD-like helicase C-terminal domain Vag1382_22040 PF00580 UvrD/REP helicase N-terminal domain Vag1382_22050 PF17946 RecC C-terminal domain Vag1382_22060 PF11893 Domain of unknown function (DUF3413) Vag1382_22060 PF00884 Sulfatase Vag1382_22080 PF03466 LysR substrate binding domain Vag1382_22080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vag1382_22090 PF07130 YebG protein Vag1382_22100 PF14602 Hexapeptide repeat of succinyl-transferase Vag1382_22100 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle Vag1382_22110 PF03009 Glycerophosphoryl diester phosphodiesterase family Vag1382_22120 PF07690 Major Facilitator Superfamily Vag1382_22130 PF00230 Major intrinsic protein Vag1382_22140 PF00370 FGGY family of carbohydrate kinases, N-terminal domain Vag1382_22140 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Vag1382_22150 PF08220 DeoR-like helix-turn-helix domain Vag1382_22150 PF00455 DeoR C terminal sensor domain Vag1382_22160 PF16901 C-terminal domain of alpha-glycerophosphate oxidase Vag1382_22160 PF01266 FAD dependent oxidoreductase Vag1382_22170 PF01544 CorA-like Mg2+ transporter protein Vag1382_22200 PF01588 Putative tRNA binding domain Vag1382_22210 PF00356 Bacterial regulatory proteins, lacI family Vag1382_22240 PF00356 Bacterial regulatory proteins, lacI family Vag1382_22250 PF01263 Aldose 1-epimerase Vag1382_22260 PF08544 GHMP kinases C terminal Vag1382_22260 PF10509 Galactokinase galactose-binding signature Vag1382_22260 PF00288 GHMP kinases N terminal domain Vag1382_22270 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain Vag1382_22270 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain Vag1382_22280 PF16363 GDP-mannose 4,6 dehydratase Vag1382_22290 PF00356 Bacterial regulatory proteins, lacI family Vag1382_22300 PF02837 Glycosyl hydrolases family 2, sugar binding domain Vag1382_22300 PF02836 Glycosyl hydrolases family 2, TIM barrel domain Vag1382_22300 PF02929 Beta galactosidase small chain Vag1382_22300 PF16353 Domain of unknown function(DUF4981) Vag1382_22300 PF00703 Glycosyl hydrolases family 2 Vag1382_22310 PF04074 YhcH/YjgK/YiaL Vag1382_22320 PF13520 Amino acid permease Vag1382_22330 PF03466 LysR substrate binding domain Vag1382_22330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vag1382_22390 PF00437 Type II/IV secretion system protein Vag1382_22450 PF13629 Pilus formation protein N terminal region Vag1382_22450 PF00263 Bacterial type II and III secretion system protein Vag1382_22450 PF04972 BON domain Vag1382_22500 PF02805 Metal binding domain of Ada Vag1382_22500 PF12833 Helix-turn-helix domain Vag1382_22510 PF00501 AMP-binding enzyme Vag1382_22530 PF03466 LysR substrate binding domain Vag1382_22530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vag1382_22540 PF14492 Elongation Factor G, domain II Vag1382_22540 PF03144 Elongation factor Tu domain 2 Vag1382_22540 PF00009 Elongation factor Tu GTP binding domain Vag1382_22540 PF00679 Elongation factor G C-terminus Vag1382_22540 PF03764 Elongation factor G, domain IV Vag1382_22550 PF18073 Rubredoxin metal binding domain Vag1382_22570 PF18429 Domain of unknown function (DUF5609) Vag1382_22590 PF01048 Phosphorylase superfamily Vag1382_22600 PF01676 Metalloenzyme superfamily Vag1382_22610 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain Vag1382_22610 PF00591 Glycosyl transferase family, a/b domain Vag1382_22610 PF02885 Glycosyl transferase family, helical bundle domain Vag1382_22620 PF01791 DeoC/LacD family aldolase Vag1382_22630 PF07670 Nucleoside recognition Vag1382_22630 PF01773 Na+ dependent nucleoside transporter N-terminus Vag1382_22630 PF07662 Na+ dependent nucleoside transporter C-terminus Vag1382_22640 PF01026 TatD related DNase Vag1382_22660 PF03144 Elongation factor Tu domain 2 Vag1382_22660 PF16658 Class II release factor RF3, C-terminal domain Vag1382_22660 PF00009 Elongation factor Tu GTP binding domain Vag1382_22670 PF00717 Peptidase S24-like Vag1382_22670 PF01381 Helix-turn-helix Vag1382_22760 PF06122 Conjugative relaxosome accessory transposon protein Vag1382_22800 PF00072 Response regulator receiver domain Vag1382_22800 PF00990 Diguanylate cyclase, GGDEF domain Vag1382_22810 PF01116 Fructose-bisphosphate aldolase class-II Vag1382_22850 PF13340 Putative transposase of IS4/5 family (DUF4096) Vag1382_22860 PF01435 Peptidase family M48 Vag1382_22880 PF00226 DnaJ domain Vag1382_22880 PF01556 DnaJ C terminal domain Vag1382_22890 PF00004 ATPase family associated with various cellular activities (AAA) Vag1382_22890 PF02861 Clp amino terminal domain, pathogenicity island component Vag1382_22890 PF10431 C-terminal, D2-small domain, of ClpB protein Vag1382_22890 PF17871 AAA lid domain Vag1382_22890 PF07724 AAA domain (Cdc48 subfamily) Vag1382_22920 PF00012 Hsp70 protein Vag1382_22930 PF01025 GrpE Vag1382_22950 PF00999 Sodium/hydrogen exchanger family Vag1382_22950 PF02254 TrkA-N domain Vag1382_22950 PF02080 TrkA-C domain Vag1382_22960 PF00011 Hsp20/alpha crystallin family Vag1382_22970 PF00011 Hsp20/alpha crystallin family Vag1382_22990 PF00158 Sigma-54 interaction domain Vag1382_22990 PF00072 Response regulator receiver domain Vag1382_22990 PF02954 Bacterial regulatory protein, Fis family Vag1382_23090 PF04002 RadC-like JAB domain Vag1382_23100 PF00092 von Willebrand factor type A domain Vag1382_23140 PF08406 CbbQ/NirQ/NorQ C-terminal Vag1382_23140 PF07728 AAA domain (dynein-related subfamily) Vag1382_23180 PF00436 Single-strand binding protein family Vag1382_23210 PF13006 Insertion element 4 transposase N-terminal Vag1382_23210 PF01609 Transposase DDE domain Vag1382_23220 PF13006 Insertion element 4 transposase N-terminal Vag1382_23220 PF01609 Transposase DDE domain Vag1382_23240 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) Vag1382_23260 PF01699 Sodium/calcium exchanger protein Vag1382_23270 PF00924 Mechanosensitive ion channel Vag1382_23270 PF05552 Conserved TM helix Vag1382_23280 PF02028 BCCT, betaine/carnitine/choline family transporter Vag1382_23340 PF06986 Type-1V conjugative transfer system mating pair stabilisation Vag1382_23350 PF06834 TraU protein Vag1382_23370 PF10502 Signal peptidase, peptidase S26 Vag1382_23400 PF13098 Thioredoxin-like domain Vag1382_23400 PF10411 Disulfide bond isomerase protein N-terminus Vag1382_23570 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) Vag1382_23570 PF18766 SWI2/SNF2 ATPase Vag1382_23570 PF12008 Type I restriction and modification enzyme - subunit R C terminal Vag1382_23590 PF01420 Type I restriction modification DNA specificity domain Vag1382_23600 PF02384 N-6 DNA Methylase Vag1382_23600 PF12161 HsdM N-terminal domain Vag1382_23630 PF14579 Helix-hairpin-helix motif Vag1382_23630 PF00929 Exonuclease Vag1382_23630 PF11490 DNA polymerase III polC-type N-terminus II Vag1382_23630 PF17657 Bacterial DNA polymerase III alpha subunit finger domain Vag1382_23630 PF07733 Bacterial DNA polymerase III alpha NTPase domain Vag1382_23630 PF02811 PHP domain Vag1382_23640 PF00717 Peptidase S24-like Vag1382_23650 PF11799 impB/mucB/samB family C-terminal domain Vag1382_23650 PF13438 Domain of unknown function (DUF4113) Vag1382_23650 PF00817 impB/mucB/samB family Vag1382_23660 PF11799 impB/mucB/samB family C-terminal domain Vag1382_23660 PF00817 impB/mucB/samB family Vag1382_23660 PF13438 Domain of unknown function (DUF4113) Vag1382_23760 PF13508 Acetyltransferase (GNAT) domain Vag1382_23770 PF02036 SCP-2 sterol transfer family Vag1382_23780 PF03707 Bacterial signalling protein N terminal repeat Vag1382_23780 PF00990 Diguanylate cyclase, GGDEF domain Vag1382_23780 PF00563 EAL domain Vag1382_23790 PF01136 Peptidase family U32 Vag1382_23800 PF01136 Peptidase family U32 Vag1382_23810 PF01554 MatE Vag1382_23830 PF13181 Tetratricopeptide repeat Vag1382_23830 PF07719 Tetratricopeptide repeat Vag1382_23840 PF00575 S1 RNA binding domain Vag1382_23840 PF01138 3' exoribonuclease family, domain 1 Vag1382_23840 PF00013 KH domain Vag1382_23840 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain Vag1382_23840 PF03725 3' exoribonuclease family, domain 2 Vag1382_23850 PF00312 Ribosomal protein S15 Vag1382_23860 PF01509 TruB family pseudouridylate synthase (N terminal domain) Vag1382_23860 PF09157 Pseudouridine synthase II TruB, C-terminal Vag1382_23860 PF16198 tRNA pseudouridylate synthase B C-terminal domain Vag1382_23870 PF02033 Ribosome-binding factor A Vag1382_23880 PF04760 Translation initiation factor IF-2, N-terminal region Vag1382_23880 PF08364 Bacterial translation initiation factor IF-2 associated region Vag1382_23880 PF00009 Elongation factor Tu GTP binding domain Vag1382_23880 PF11987 Translation-initiation factor 2 Vag1382_23890 PF13184 NusA-like KH domain Vag1382_23890 PF08529 NusA N-terminal domain Vag1382_23890 PF00575 S1 RNA binding domain Vag1382_23900 PF02576 RimP N-terminal domain Vag1382_23900 PF17384 RimP C-terminal SH3 domain Vag1382_23910 PF03840 Preprotein translocase SecG subunit Vag1382_23920 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Vag1382_23920 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Vag1382_23920 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Vag1382_23920 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Vag1382_23930 PF00809 Pterin binding enzyme Vag1382_23940 PF01434 Peptidase family M41 Vag1382_23940 PF06480 FtsH Extracellular Vag1382_23940 PF00004 ATPase family associated with various cellular activities (AAA) Vag1382_23940 PF17862 AAA+ lid domain Vag1382_23950 PF01728 FtsJ-like methyltransferase Vag1382_23960 PF01985 CRS1 / YhbY (CRM) domain Vag1382_23970 PF03449 Transcription elongation factor, N-terminal Vag1382_23970 PF01272 Transcription elongation factor, GreA/GreB, C-term Vag1382_23980 PF13609 Gram-negative porin Vag1382_23990 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family Vag1382_24010 PF00579 tRNA synthetases class I (W and Y) Vag1382_24020 PF08525 Opacity-associated protein A N-terminal motif Vag1382_24020 PF01476 LysM domain Vag1382_24020 PF01551 Peptidase family M23 Vag1382_24030 PF00873 AcrB/AcrD/AcrF family Vag1382_24050 PF01521 Iron-sulphur cluster biosynthesis Vag1382_24060 PF00202 Aminotransferase class-III Vag1382_24070 PF01594 AI-2E family transporter Vag1382_24080 PF05175 Methyltransferase small domain Vag1382_24080 PF08468 Methyltransferase small domain N-terminal Vag1382_24090 PF00512 His Kinase A (phospho-acceptor) domain Vag1382_24090 PF00072 Response regulator receiver domain Vag1382_24090 PF09308 LuxQ, periplasmic Vag1382_24090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vag1382_24100 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Vag1382_24110 PF00528 Binding-protein-dependent transport system inner membrane component Vag1382_24130 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Vag1382_24130 PF00005 ABC transporter Vag1382_24140 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Vag1382_24140 PF00005 ABC transporter Vag1382_24160 PF01869 BadF/BadG/BcrA/BcrD ATPase family Vag1382_24170 PF02838 Glycosyl hydrolase family 20, domain 2 Vag1382_24170 PF00728 Glycosyl hydrolase family 20, catalytic domain Vag1382_24180 PF06165 Glycosyltransferase family 36 Vag1382_24180 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain Vag1382_24190 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Vag1382_24190 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Vag1382_24190 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Vag1382_24190 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Vag1382_24200 PF00005 ABC transporter Vag1382_24200 PF08402 TOBE domain Vag1382_24220 PF13416 Bacterial extracellular solute-binding protein Vag1382_24230 PF00909 Ammonium Transporter Family Vag1382_24240 PF00543 Nitrogen regulatory protein P-II Vag1382_24250 PF06062 Uncharacterised protein family (UPF0231) Vag1382_24260 PF11791 Aconitate B N-terminal domain Vag1382_24260 PF06434 Aconitate hydratase 2 N-terminus Vag1382_24260 PF00330 Aconitase family (aconitate hydratase) Vag1382_24270 PF01734 Patatin-like phospholipase Vag1382_24280 PF00912 Transglycosylase Vag1382_24280 PF00905 Penicillin binding protein transpeptidase domain Vag1382_24280 PF14814 Bifunctional transglycosylase second domain Vag1382_24290 PF00270 DEAD/DEAH box helicase Vag1382_24290 PF04408 Helicase associated domain (HA2) Vag1382_24290 PF00271 Helicase conserved C-terminal domain Vag1382_24290 PF08482 ATP-dependent helicase C-terminal Vag1382_24300 PF03749 Sugar fermentation stimulation protein RE domain Vag1382_24300 PF17746 SfsA N-terminal OB domain Vag1382_24310 PF01258 Prokaryotic dksA/traR C4-type zinc finger Vag1382_24320 PF00749 tRNA synthetases class I (E and Q), catalytic domain Vag1382_24330 PF12626 Polymerase A arginine-rich C-terminus Vag1382_24330 PF01743 Poly A polymerase head domain Vag1382_24330 PF12627 Probable RNA and SrmB- binding site of polymerase A Vag1382_24340 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) Vag1382_24350 PF02548 Ketopantoate hydroxymethyltransferase Vag1382_24360 PF02569 Pantoate-beta-alanine ligase Vag1382_24370 PF03279 Bacterial lipid A biosynthesis acyltransferase Vag1382_24380 PF01061 ABC-2 type transporter Vag1382_24390 PF00005 ABC transporter Vag1382_24400 PF01740 STAS domain Vag1382_24400 PF00916 Sulfate permease family Vag1382_24410 PF00484 Carbonic anhydrase Vag1382_24420 PF00156 Phosphoribosyl transferase domain Vag1382_24430 PF00440 Bacterial regulatory proteins, tetR family Vag1382_24440 PF07992 Pyridine nucleotide-disulphide oxidoreductase Vag1382_24440 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Vag1382_24450 PF02817 e3 binding domain Vag1382_24450 PF00364 Biotin-requiring enzyme Vag1382_24450 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Vag1382_24460 PF17831 Pyruvate dehydrogenase E1 component middle domain Vag1382_24460 PF00456 Transketolase, thiamine diphosphate binding domain Vag1382_24470 PF00392 Bacterial regulatory proteins, gntR family Vag1382_24470 PF07729 FCD domain Vag1382_24480 PF01510 N-acetylmuramoyl-L-alanine amidase Vag1382_24490 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain Vag1382_24490 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain Vag1382_24510 PF00437 Type II/IV secretion system protein Vag1382_24510 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain Vag1382_24520 PF00482 Type II secretion system (T2SS), protein F Vag1382_24530 PF06750 Bacterial Peptidase A24 N-terminal domain Vag1382_24530 PF01478 Type IV leader peptidase family Vag1382_24540 PF01121 Dephospho-CoA kinase Vag1382_24550 PF07072 Cell division protein Vag1382_24560 PF03884 DNA gyrase inhibitor YacG Vag1382_24570 PF01245 Ribosomal protein L19 Vag1382_24580 PF01746 tRNA (Guanine-1)-methyltransferase Vag1382_24590 PF01782 RimM N-terminal domain Vag1382_24590 PF05239 PRC-barrel domain Vag1382_24600 PF00886 Ribosomal protein S16 Vag1382_24610 PF02881 SRP54-type protein, helical bundle domain Vag1382_24610 PF00448 SRP54-type protein, GTPase domain Vag1382_24610 PF02978 Signal peptide binding domain Vag1382_24620 PF01578 Cytochrome C assembly protein Vag1382_24630 PF01595 Cyclin M transmembrane N-terminal domain Vag1382_24630 PF03471 Transporter associated domain Vag1382_24630 PF00571 CBS domain Vag1382_24640 PF02664 S-Ribosylhomocysteinase (LuxS) Vag1382_24660 PF04262 Glutamate-cysteine ligase Vag1382_24670 PF05193 Peptidase M16 inactive domain Vag1382_24670 PF00675 Insulinase (Peptidase family M16) Vag1382_24680 PF09335 SNARE associated Golgi protein Vag1382_24700 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit Vag1382_24710 PF00364 Biotin-requiring enzyme Vag1382_24710 PF00682 HMGL-like Vag1382_24710 PF02436 Conserved carboxylase domain Vag1382_24720 PF04277 Oxaloacetate decarboxylase, gamma chain Vag1382_24730 PF02599 Global regulator protein family Vag1382_24740 PF01842 ACT domain Vag1382_24740 PF13840 ACT domain Vag1382_24740 PF00696 Amino acid kinase family Vag1382_24750 PF02272 DHHA1 domain Vag1382_24750 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Vag1382_24750 PF01411 tRNA synthetases class II (A) Vag1382_24760 PF02631 RecX family Vag1382_24770 PF00154 recA bacterial DNA recombination protein Vag1382_24780 PF02464 Competence-damaged protein Vag1382_24790 PF01624 MutS domain I Vag1382_24790 PF05188 MutS domain II Vag1382_24790 PF05192 MutS domain III Vag1382_24790 PF05190 MutS family domain IV Vag1382_24790 PF00488 MutS domain V Vag1382_24800 PF04545 Sigma-70, region 4 Vag1382_24800 PF04539 Sigma-70 region 3 Vag1382_24800 PF04542 Sigma-70 region 2 Vag1382_24800 PF00140 Sigma-70 factor, region 1.2 Vag1382_24810 PF01476 LysM domain Vag1382_24810 PF01551 Peptidase family M23 Vag1382_24830 PF01975 Survival protein SurE Vag1382_24840 PF01142 tRNA pseudouridine synthase D (TruD) Vag1382_24850 PF02542 YgbB family Vag1382_24860 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Vag1382_24870 PF04977 Septum formation initiator Vag1382_24880 PF03952 Enolase, N-terminal domain Vag1382_24880 PF00113 Enolase, C-terminal TIM barrel domain Vag1382_24890 PF06418 CTP synthase N-terminus Vag1382_24890 PF00117 Glutamine amidotransferase class-I Vag1382_24900 PF03819 MazG nucleotide pyrophosphohydrolase domain Vag1382_24910 PF02824 TGS domain Vag1382_24910 PF13291 ACT domain Vag1382_24910 PF04607 Region found in RelA / SpoT proteins Vag1382_24920 PF01938 TRAM domain Vag1382_24920 PF05958 tRNA (Uracil-5-)-methyltransferase Vag1382_24930 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) Vag1382_24930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vag1382_24930 PF00072 Response regulator receiver domain Vag1382_24930 PF00512 His Kinase A (phospho-acceptor) domain Vag1382_24930 PF00672 HAMP domain Vag1382_24930 PF01627 Hpt domain Vag1382_24940 PF01648 4'-phosphopantetheinyl transferase superfamily Vag1382_24950 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ Vag1382_24960 PF11967 Recombination protein O N terminal Vag1382_24960 PF02565 Recombination protein O C terminal Vag1382_24970 PF07650 KH domain Vag1382_24970 PF01926 50S ribosome-binding GTPase Vag1382_24980 PF00035 Double-stranded RNA binding motif Vag1382_24980 PF14622 Ribonuclease-III-like Vag1382_24990 PF10502 Signal peptidase, peptidase S26 Vag1382_25000 PF03144 Elongation factor Tu domain 2 Vag1382_25000 PF00679 Elongation factor G C-terminus Vag1382_25000 PF00009 Elongation factor Tu GTP binding domain Vag1382_25000 PF06421 GTP-binding protein LepA C-terminus Vag1382_25020 PF17188 MucB/RseB C-terminal domain Vag1382_25020 PF03888 MucB/RseB N-terminal domain Vag1382_25030 PF03872 Anti sigma-E protein RseA, N-terminal domain Vag1382_25030 PF03873 Anti sigma-E protein RseA, C-terminal domain Vag1382_25040 PF04542 Sigma-70 region 2 Vag1382_25040 PF08281 Sigma-70, region 4 Vag1382_25050 PF02910 Fumarate reductase flavoprotein C-term Vag1382_25050 PF00890 FAD binding domain Vag1382_25070 PF03937 Flavinator of succinate dehydrogenase Vag1382_25080 PF01571 Aminomethyltransferase folate-binding domain Vag1382_25110 PF01494 FAD binding domain Vag1382_25120 PF01494 FAD binding domain Vag1382_25130 PF03695 Uncharacterised protein family (UPF0149) Vag1382_25140 PF05164 Cell division protein ZapA Vag1382_25150 PF01812 5-formyltetrahydrofolate cyclo-ligase family Vag1382_25160 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) Vag1382_25170 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Vag1382_25170 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Vag1382_25170 PF01842 ACT domain Vag1382_25180 PF04402 Protein of unknown function (DUF541) Vag1382_25190 PF03466 LysR substrate binding domain Vag1382_25190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vag1382_25200 PF01810 LysE type translocator Vag1382_25220 PF05552 Conserved TM helix Vag1382_25220 PF00924 Mechanosensitive ion channel Vag1382_25230 PF01116 Fructose-bisphosphate aldolase class-II Vag1382_25240 PF00162 Phosphoglycerate kinase Vag1382_25250 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Vag1382_25250 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Vag1382_25260 PF07715 TonB-dependent Receptor Plug Domain Vag1382_25260 PF00593 TonB dependent receptor Vag1382_25270 PF03466 LysR substrate binding domain Vag1382_25270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vag1382_25280 PF00456 Transketolase, thiamine diphosphate binding domain Vag1382_25280 PF02780 Transketolase, C-terminal domain Vag1382_25280 PF02779 Transketolase, pyrimidine binding domain Vag1382_25290 PF02773 S-adenosylmethionine synthetase, C-terminal domain Vag1382_25290 PF02772 S-adenosylmethionine synthetase, central domain Vag1382_25290 PF00438 S-adenosylmethionine synthetase, N-terminal domain Vag1382_25310 PF10263 SprT-like family Vag1382_25310 PF17283 SprT-like zinc ribbon domain Vag1382_25320 PF04231 Endonuclease I Vag1382_25330 PF04452 RNA methyltransferase Vag1382_25340 PF02951 Prokaryotic glutathione synthetase, N-terminal domain Vag1382_25340 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain Vag1382_25350 PF02622 Uncharacterized ACR, COG1678 Vag1382_25360 PF03652 Holliday junction resolvase Vag1382_25370 PF00437 Type II/IV secretion system protein Vag1382_25380 PF00437 Type II/IV secretion system protein Vag1382_25390 PF01168 Alanine racemase, N-terminal domain Vag1382_25400 PF14748 Pyrroline-5-carboxylate reductase dimerisation Vag1382_25400 PF03807 NADP oxidoreductase coenzyme F420-dependent Vag1382_25410 PF02325 YGGT family Vag1382_25420 PF02594 Uncharacterised ACR, YggU family COG1872 Vag1382_25440 PF01725 Ham1 family Vag1382_25450 PF04055 Radical SAM superfamily Vag1382_25450 PF06969 HemN C-terminal domain Vag1382_25460 PF04960 Glutaminase Vag1382_25470 PF02086 D12 class N6 adenine-specific DNA methyltransferase Vag1382_25480 PF02390 Putative methyltransferase Vag1382_25490 PF14815 NUDIX domain Vag1382_25490 PF00730 HhH-GPD superfamily base excision DNA repair protein Vag1382_25490 PF00633 Helix-hairpin-helix motif Vag1382_25500 PF04362 Bacterial Fe(2+) trafficking Vag1382_25510 PF01464 Transglycosylase SLT domain Vag1382_25510 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain Vag1382_25520 PF00672 HAMP domain Vag1382_25520 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Vag1382_25520 PF17200 Single Cache domain 2 Vag1382_25530 PF00171 Aldehyde dehydrogenase family Vag1382_25550 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family Vag1382_25550 PF00356 Bacterial regulatory proteins, lacI family Vag1382_25560 PF04794 YdjC-like protein Vag1382_25570 PF02056 Family 4 glycosyl hydrolase Vag1382_25570 PF11975 Family 4 glycosyl hydrolase C-terminal domain Vag1382_25580 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit Vag1382_25590 PF02378 Phosphotransferase system, EIIC Vag1382_25600 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit Vag1382_25610 PF01522 Polysaccharide deacetylase Vag1382_25620 PF08448 PAS fold Vag1382_25620 PF00990 Diguanylate cyclase, GGDEF domain Vag1382_25630 PF02371 Transposase IS116/IS110/IS902 family Vag1382_25630 PF01548 Transposase Vag1382_25640 PF02371 Transposase IS116/IS110/IS902 family Vag1382_25640 PF01548 Transposase Vag1382_25660 PF13737 Transposase DDE domain Vag1382_25680 PF00483 Nucleotidyl transferase Vag1382_25760 PF00072 Response regulator receiver domain Vag1382_25760 PF00990 Diguanylate cyclase, GGDEF domain Vag1382_25930 PF10011 Predicted membrane protein (DUF2254) Vag1382_25950 PF03739 Lipopolysaccharide export system permease LptF/LptG Vag1382_25960 PF03739 Lipopolysaccharide export system permease LptF/LptG Vag1382_25970 PF02789 Cytosol aminopeptidase family, N-terminal domain Vag1382_25970 PF00883 Cytosol aminopeptidase family, catalytic domain Vag1382_25980 PF04364 DNA polymerase III chi subunit, HolC Vag1382_25990 PF10458 Valyl tRNA synthetase tRNA binding arm Vag1382_25990 PF00133 tRNA synthetases class I (I, L, M and V) Vag1382_25990 PF08264 Anticodon-binding domain of tRNA Vag1382_26010 PF00583 Acetyltransferase (GNAT) family Vag1382_26030 PF06877 Regulator of ribonuclease activity B Vag1382_26050 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Vag1382_26050 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Vag1382_26070 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Vag1382_26070 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Vag1382_26080 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain Vag1382_26080 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain Vag1382_26090 PF01042 Endoribonuclease L-PSP Vag1382_26100 PF01553 Acyltransferase Vag1382_26110 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Vag1382_26120 PF01722 BolA-like protein Vag1382_26140 PF05494 MlaC protein Vag1382_26150 PF02470 MlaD protein Vag1382_26160 PF02405 Permease MlaE Vag1382_26170 PF00005 ABC transporter Vag1382_26180 PF01699 Sodium/calcium exchanger protein Vag1382_26190 PF00571 CBS domain Vag1382_26190 PF01380 SIS domain Vag1382_26210 PF03968 OstA-like protein Vag1382_26220 PF12399 Branched-chain amino acid ATP-binding cassette transporter Vag1382_26220 PF00005 ABC transporter Vag1382_26230 PF00309 Sigma-54 factor, Activator interacting domain (AID) Vag1382_26230 PF04552 Sigma-54, DNA binding domain Vag1382_26230 PF04963 Sigma-54 factor, core binding domain Vag1382_26240 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein Vag1382_26250 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 Vag1382_26260 PF03668 P-loop ATPase protein family Vag1382_26270 PF00381 PTS HPr component phosphorylation site Vag1382_26280 PF03448 MgtE intracellular N domain Vag1382_26280 PF01769 Divalent cation transporter Vag1382_26280 PF00571 CBS domain Vag1382_26290 PF01523 Putative modulator of DNA gyrase Vag1382_26300 PF04751 Protein of unknown function (DUF615) Vag1382_26310 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Vag1382_26310 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Vag1382_26320 PF00849 RNA pseudouridylate synthase Vag1382_26340 PF18337 RapA N-terminal Tudor like domain Vag1382_26340 PF18339 RapA N-terminal Tudor like domain 1 Vag1382_26340 PF00176 SNF2 family N-terminal domain Vag1382_26340 PF12137 RNA polymerase recycling family C-terminal Vag1382_26340 PF00271 Helicase conserved C-terminal domain Vag1382_26350 PF02562 PhoH-like protein Vag1382_26350 PF13638 PIN domain Vag1382_26360 PF01523 Putative modulator of DNA gyrase Vag1382_26370 PF00795 Carbon-nitrogen hydrolase Vag1382_26380 PF13502 AsmA-like C-terminal region Vag1382_26380 PF13116 Protein of unknown function Vag1382_26390 PF10150 Ribonuclease E/G family Vag1382_26390 PF00575 S1 RNA binding domain Vag1382_26400 PF02545 Maf-like protein Vag1382_26410 PF04093 rod shape-determining protein MreD Vag1382_26420 PF04085 rod shape-determining protein MreC Vag1382_26500 PF00114 Pilin (bacterial filament) Vag1382_26500 PF07963 Prokaryotic N-terminal methylation motif Vag1382_26520 PF00482 Type II secretion system (T2SS), protein F Vag1382_26530 PF00437 Type II/IV secretion system protein Vag1382_26530 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain Vag1382_26550 PF01471 Putative peptidoglycan binding domain Vag1382_26550 PF13401 AAA domain Vag1382_26560 PF03958 Bacterial type II/III secretion system short domain Vag1382_26560 PF00263 Bacterial type II and III secretion system protein Vag1382_26600 PF00563 EAL domain Vag1382_26600 PF00990 Diguanylate cyclase, GGDEF domain Vag1382_26600 PF17157 Gammaproteobacterial periplasmic sensor domain Vag1382_26610 PF01348 Type II intron maturase Vag1382_26610 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) Vag1382_26620 PF00436 Single-strand binding protein family Vag1382_26630 PF00196 Bacterial regulatory proteins, luxR family Vag1382_26640 PF00483 Nucleotidyl transferase Vag1382_26650 PF17760 UvrA interaction domain Vag1382_26650 PF17755 UvrA DNA-binding domain Vag1382_26650 PF00005 ABC transporter Vag1382_26670 PF00266 Aminotransferase class-V Vag1382_26680 PF01842 ACT domain Vag1382_26680 PF00696 Amino acid kinase family Vag1382_26690 PF02310 B12 binding domain Vag1382_26690 PF02574 Homocysteine S-methyltransferase Vag1382_26690 PF00809 Pterin binding enzyme Vag1382_26690 PF02607 B12 binding domain Vag1382_26690 PF02965 Vitamin B12 dependent methionine synthase, activation domain Vag1382_26700 PF00999 Sodium/hydrogen exchanger family Vag1382_26710 PF00665 Integrase core domain Vag1382_26720 PF01527 Transposase Vag1382_26730 PF01507 Phosphoadenosine phosphosulfate reductase family Vag1382_26740 PF01077 Nitrite and sulphite reductase 4Fe-4S domain Vag1382_26740 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain Vag1382_26750 PF00175 Oxidoreductase NAD-binding domain Vag1382_26750 PF00258 Flavodoxin Vag1382_26750 PF00667 FAD binding domain Vag1382_26790 PF01207 Dihydrouridine synthase (Dus) Vag1382_26820 PF01810 LysE type translocator Vag1382_26840 PF02754 Cysteine-rich domain Vag1382_26840 PF13183 4Fe-4S dicluster domain Vag1382_26850 PF00890 FAD binding domain Vag1382_26860 PF04324 BFD-like [2Fe-2S] binding domain Vag1382_26860 PF01266 FAD dependent oxidoreductase Vag1382_26870 PF13737 Transposase DDE domain Vag1382_27000 PF01475 Ferric uptake regulator family Vag1382_27020 PF00342 Phosphoglucose isomerase Vag1382_27040 PF01894 Uncharacterised protein family UPF0047 Vag1382_27050 PF01168 Alanine racemase, N-terminal domain Vag1382_27050 PF00842 Alanine racemase, C-terminal domain Vag1382_27060 PF03796 DnaB-like helicase C terminal domain Vag1382_27060 PF00772 DnaB-like helicase N terminal domain Vag1382_27080 PF01281 Ribosomal protein L9, N-terminal domain Vag1382_27080 PF03948 Ribosomal protein L9, C-terminal domain Vag1382_27090 PF01084 Ribosomal protein S18 Vag1382_27100 PF00436 Single-strand binding protein family Vag1382_27110 PF01250 Ribosomal protein S6 Vag1382_27120 PF00834 Ribulose-phosphate 3 epimerase family Vag1382_27130 PF02086 D12 class N6 adenine-specific DNA methyltransferase Vag1382_27150 PF01761 3-dehydroquinate synthase Vag1382_27160 PF01202 Shikimate kinase Vag1382_27170 PF03958 Bacterial type II/III secretion system short domain Vag1382_27170 PF00263 Bacterial type II and III secretion system protein Vag1382_27170 PF07660 Secretin and TonB N terminus short domain Vag1382_27170 PF11741 AMIN domain Vag1382_27220 PF00912 Transglycosylase Vag1382_27220 PF17092 Penicillin-binding protein OB-like domain Vag1382_27220 PF00905 Penicillin binding protein transpeptidase domain Vag1382_27230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vag1382_27230 PF03466 LysR substrate binding domain Vag1382_27240 PF00462 Glutaredoxin Vag1382_27240 PF08534 Redoxin Vag1382_27250 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Vag1382_27250 PF07992 Pyridine nucleotide-disulphide oxidoreductase Vag1382_27280 PF14698 Argininosuccinate lyase C-terminal Vag1382_27280 PF00583 Acetyltransferase (GNAT) family Vag1382_27280 PF00206 Lyase Vag1382_27290 PF00764 Arginosuccinate synthase Vag1382_27300 PF00696 Amino acid kinase family Vag1382_27310 PF01118 Semialdehyde dehydrogenase, NAD binding domain Vag1382_27310 PF02774 Semialdehyde dehydrogenase, dimerisation domain Vag1382_27320 PF07687 Peptidase dimerisation domain Vag1382_27320 PF01546 Peptidase family M20/M25/M40 Vag1382_27330 PF00311 Phosphoenolpyruvate carboxylase Vag1382_27350 PF02219 Methylenetetrahydrofolate reductase Vag1382_27360 PF03447 Homoserine dehydrogenase, NAD binding domain Vag1382_27360 PF00742 Homoserine dehydrogenase Vag1382_27360 PF00696 Amino acid kinase family Vag1382_27370 PF01053 Cys/Met metabolism PLP-dependent enzyme Vag1382_27390 PF00390 Malic enzyme, N-terminal domain Vag1382_27390 PF03949 Malic enzyme, NAD binding domain Vag1382_27400 PF00210 Ferritin-like domain Vag1382_27410 PF04324 BFD-like [2Fe-2S] binding domain Vag1382_27420 PF03144 Elongation factor Tu domain 2 Vag1382_27420 PF03143 Elongation factor Tu C-terminal domain Vag1382_27420 PF00009 Elongation factor Tu GTP binding domain Vag1382_27430 PF14492 Elongation Factor G, domain II Vag1382_27430 PF00679 Elongation factor G C-terminus Vag1382_27430 PF03144 Elongation factor Tu domain 2 Vag1382_27430 PF03764 Elongation factor G, domain IV Vag1382_27430 PF00009 Elongation factor Tu GTP binding domain Vag1382_27440 PF00177 Ribosomal protein S7p/S5e Vag1382_27450 PF00164 Ribosomal protein S12/S23 Vag1382_27460 PF04077 DsrH like protein Vag1382_27470 PF02635 DsrE/DsrF-like family Vag1382_27480 PF02635 DsrE/DsrF-like family Vag1382_27490 PF13309 HTH domain Vag1382_27490 PF08348 YheO-like PAS domain Vag1382_27500 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase Vag1382_27500 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Vag1382_27520 PF04102 SlyX Vag1382_27530 PF01112 Asparaginase Vag1382_27540 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Vag1382_27560 PF02254 TrkA-N domain Vag1382_27560 PF00999 Sodium/hydrogen exchanger family Vag1382_27570 PF02525 Flavodoxin-like fold Vag1382_27580 PF00005 ABC transporter Vag1382_27580 PF12848 ABC transporter Vag1382_27600 PF00561 alpha/beta hydrolase fold Vag1382_27610 PF06794 Uncharacterised protein family (UPF0270) Vag1382_27620 PF00485 Phosphoribulokinase / Uridine kinase family Vag1382_27630 PF13545 Crp-like helix-turn-helix domain Vag1382_27630 PF00027 Cyclic nucleotide-binding domain Vag1382_27650 PF00171 Aldehyde dehydrogenase family Vag1382_27660 PF04958 Arginine N-succinyltransferase beta subunit Vag1382_27670 PF00202 Aminotransferase class-III Vag1382_27680 PF00117 Glutamine amidotransferase class-I Vag1382_27710 PF00579 tRNA synthetases class I (W and Y) Vag1382_27720 PF13419 Haloacid dehalogenase-like hydrolase Vag1382_27730 PF08032 RNA 2'-O ribose methyltransferase substrate binding Vag1382_27730 PF00588 SpoU rRNA Methylase family Vag1382_27740 PF00575 S1 RNA binding domain Vag1382_27740 PF00773 RNB domain Vag1382_27740 PF08206 Ribonuclease B OB domain Vag1382_27740 PF08461 Ribonuclease R winged-helix domain Vag1382_27740 PF17876 Cold shock domain Vag1382_27750 PF02082 Transcriptional regulator Vag1382_27760 PF00042 Globin Vag1382_27760 PF00175 Oxidoreductase NAD-binding domain Vag1382_27760 PF00970 Oxidoreductase FAD-binding domain Vag1382_27770 PF08238 Sel1 repeat Vag1382_27780 PF00709 Adenylosuccinate synthetase Vag1382_27790 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) Vag1382_27800 PF01145 SPFH domain / Band 7 family Vag1382_27810 PF12221 Bacterial membrane protein N terminal Vag1382_27810 PF01145 SPFH domain / Band 7 family Vag1382_27820 PF16360 GTP-binding GTPase Middle Region Vag1382_27820 PF01926 50S ribosome-binding GTPase Vag1382_27820 PF13167 GTP-binding GTPase N-terminal Vag1382_27830 PF17209 Hfq protein Vag1382_27850 PF01119 DNA mismatch repair protein, C-terminal domain Vag1382_27850 PF08676 MutL C terminal dimerisation domain Vag1382_27860 PF01520 N-acetylmuramoyl-L-alanine amidase Vag1382_27870 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE Vag1382_27880 PF08331 Domain of unknown function (DUF1730) Vag1382_27890 PF00929 Exonuclease Vag1382_27900 PF03193 RsgA GTPase Vag1382_27910 PF02666 Phosphatidylserine decarboxylase Vag1382_27920 PF03600 Citrate transporter Vag1382_27920 PF02080 TrkA-C domain Vag1382_27940 PF06415 BPG-independent PGAM N-terminus (iPGM_N) Vag1382_27940 PF01676 Metalloenzyme superfamily Vag1382_27950 PF00581 Rhodanese-like domain Vag1382_27960 PF02556 Preprotein translocase subunit SecB Vag1382_27970 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus Vag1382_27970 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Vag1382_27980 PF00132 Bacterial transferase hexapeptide (six repeats) Vag1382_27980 PF06426 Serine acetyltransferase, N-terminal Vag1382_27990 PF01551 Peptidase family M23 Vag1382_28010 PF00440 Bacterial regulatory proteins, tetR family Vag1382_28010 PF08360 QacR-like protein, C-terminal region Vag1382_28030 PF00152 tRNA synthetases class II (D, K and N) Vag1382_28040 PF00890 FAD binding domain Vag1382_28040 PF02910 Fumarate reductase flavoprotein C-term Vag1382_28050 PF13085 2Fe-2S iron-sulfur cluster binding domain Vag1382_28050 PF13183 4Fe-4S dicluster domain Vag1382_28060 PF02300 Fumarate reductase subunit C Vag1382_28070 PF02313 Fumarate reductase subunit D Vag1382_28090 PF08207 Elongation factor P (EF-P) KOW-like domain Vag1382_28090 PF01132 Elongation factor P (EF-P) OB domain Vag1382_28090 PF09285 Elongation factor P, C-terminal Vag1382_28100 PF04055 Radical SAM superfamily Vag1382_28110 PF02308 MgtC family Vag1382_28130 PF00118 TCP-1/cpn60 chaperonin family Vag1382_28140 PF00166 Chaperonin 10 Kd subunit Vag1382_28150 PF01554 MatE Vag1382_28160 PF00365 Phosphofructokinase Vag1382_28170 PF01545 Cation efflux family Vag1382_28170 PF16916 Dimerisation domain of Zinc Transporter Vag1382_28190 PF00072 Response regulator receiver domain Vag1382_28190 PF00486 Transcriptional regulatory protein, C terminal Vag1382_28200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vag1382_28200 PF16527 Two-component sensor protein CpxA, periplasmic domain Vag1382_28200 PF00672 HAMP domain Vag1382_28200 PF00512 His Kinase A (phospho-acceptor) domain Vag1382_28210 PF02777 Iron/manganese superoxide dismutases, C-terminal domain Vag1382_28210 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain Vag1382_28220 PF00588 SpoU rRNA Methylase family Vag1382_28230 PF04186 FxsA cytoplasmic membrane protein Vag1382_28240 PF00206 Lyase Vag1382_28240 PF10415 Fumarase C C-terminus Vag1382_28250 PF03605 Anaerobic c4-dicarboxylate membrane transporter Vag1382_28260 PF11412 Disulphide bond corrector protein DsbC Vag1382_28260 PF02683 Cytochrome C biogenesis protein transmembrane region Vag1382_28270 PF00196 Bacterial regulatory proteins, luxR family Vag1382_28270 PF00072 Response regulator receiver domain Vag1382_28280 PF00999 Sodium/hydrogen exchanger family Vag1382_28280 PF02080 TrkA-C domain Vag1382_28280 PF03471 Transporter associated domain Vag1382_28300 PF00474 Sodium:solute symporter family Vag1382_28330 PF00206 Lyase Vag1382_28330 PF10415 Fumarase C C-terminus Vag1382_28340 PF09308 LuxQ, periplasmic Vag1382_28340 PF00512 His Kinase A (phospho-acceptor) domain Vag1382_28340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vag1382_28340 PF00072 Response regulator receiver domain Vag1382_28350 PF12832 MFS_1 like family Vag1382_28380 PF13193 AMP-binding enzyme C-terminal domain Vag1382_28380 PF00501 AMP-binding enzyme Vag1382_28380 PF16177 Acetyl-coenzyme A synthetase N-terminus Vag1382_28390 PF01220 Dehydroquinase class II Vag1382_28400 PF00364 Biotin-requiring enzyme Vag1382_28410 PF00289 Biotin carboxylase, N-terminal domain Vag1382_28410 PF02785 Biotin carboxylase C-terminal domain Vag1382_28410 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Vag1382_28430 PF01207 Dihydrouridine synthase (Dus) Vag1382_28440 PF02954 Bacterial regulatory protein, Fis family Vag1382_28460 PF00005 ABC transporter Vag1382_28460 PF12848 ABC transporter Vag1382_28470 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain Vag1382_28470 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain Vag1382_28470 PF01276 Orn/Lys/Arg decarboxylase, major domain Vag1382_28480 PF13520 Amino acid permease Vag1382_28500 PF18500 CadC C-terminal domain 1 Vag1382_28500 PF00486 Transcriptional regulatory protein, C terminal Vag1382_28510 PF13411 MerR HTH family regulatory protein Vag1382_28520 PF02142 MGS-like domain Vag1382_28520 PF01808 AICARFT/IMPCHase bienzyme Vag1382_28530 PF02844 Phosphoribosylglycinamide synthetase, N domain Vag1382_28530 PF02843 Phosphoribosylglycinamide synthetase, C domain Vag1382_28530 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain Vag1382_28550 PF00216 Bacterial DNA-binding protein Vag1382_28560 PF00571 CBS domain Vag1382_28560 PF01595 Cyclin M transmembrane N-terminal domain Vag1382_28570 PF04222 Protein of unknown function (DUF416) Vag1382_28580 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Vag1382_28590 PF03167 Uracil DNA glycosylase superfamily Vag1382_28600 PF01208 Uroporphyrinogen decarboxylase (URO-D) Vag1382_28610 PF00293 NUDIX domain Vag1382_28610 PF09297 NADH pyrophosphatase zinc ribbon domain Vag1382_28620 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ Vag1382_28630 PF04983 RNA polymerase Rpb1, domain 3 Vag1382_28630 PF00623 RNA polymerase Rpb1, domain 2 Vag1382_28630 PF04998 RNA polymerase Rpb1, domain 5 Vag1382_28630 PF04997 RNA polymerase Rpb1, domain 1 Vag1382_28630 PF05000 RNA polymerase Rpb1, domain 4 Vag1382_28640 PF00562 RNA polymerase Rpb2, domain 6 Vag1382_28640 PF10385 RNA polymerase beta subunit external 1 domain Vag1382_28640 PF04565 RNA polymerase Rpb2, domain 3 Vag1382_28640 PF04561 RNA polymerase Rpb2, domain 2 Vag1382_28640 PF04563 RNA polymerase beta subunit Vag1382_28640 PF04560 RNA polymerase Rpb2, domain 7 Vag1382_28650 PF16320 Ribosomal protein L7/L12 dimerisation domain Vag1382_28650 PF00542 Ribosomal protein L7/L12 C-terminal domain Vag1382_28660 PF00466 Ribosomal protein L10 Vag1382_28670 PF00687 Ribosomal protein L1p/L10e family Vag1382_28680 PF03946 Ribosomal protein L11, N-terminal domain Vag1382_28680 PF00298 Ribosomal protein L11, RNA binding domain Vag1382_28690 PF02357 Transcription termination factor nusG Vag1382_28690 PF00467 KOW motif Vag1382_28700 PF00584 SecE/Sec61-gamma subunits of protein translocation complex Vag1382_28710 PF00009 Elongation factor Tu GTP binding domain Vag1382_28710 PF03143 Elongation factor Tu C-terminal domain Vag1382_28710 PF03144 Elongation factor Tu domain 2 Vag1382_28720 PF00485 Phosphoribulokinase / Uridine kinase family Vag1382_28730 PF03099 Biotin/lipoate A/B protein ligase family Vag1382_28730 PF08279 HTH domain Vag1382_28730 PF02237 Biotin protein ligase C terminal domain Vag1382_28740 PF01565 FAD binding domain Vag1382_28740 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain Vag1382_28760 PF13091 PLD-like domain Vag1382_28780 PF01177 Asp/Glu/Hydantoin racemase Vag1382_28800 PF07715 TonB-dependent Receptor Plug Domain Vag1382_28800 PF00593 TonB dependent receptor Vag1382_28810 PF05958 tRNA (Uracil-5-)-methyltransferase Vag1382_28830 PF00440 Bacterial regulatory proteins, tetR family Vag1382_28840 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Vag1382_28840 PF07992 Pyridine nucleotide-disulphide oxidoreductase Vag1382_28850 PF01554 MatE Vag1382_28860 PF04072 Leucine carboxyl methyltransferase Vag1382_28870 PF00717 Peptidase S24-like Vag1382_28870 PF01726 LexA DNA binding domain Vag1382_28880 PF01553 Acyltransferase Vag1382_28890 PF01040 UbiA prenyltransferase family Vag1382_28900 PF04345 Chorismate lyase Vag1382_28910 PF03748 Flagellar basal body-associated protein FliL Vag1382_28920 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease Vag1382_28920 PF01694 Rhomboid family Vag1382_28930 PF00581 Rhodanese-like domain Vag1382_28940 PF04545 Sigma-70, region 4 Vag1382_28940 PF04542 Sigma-70 region 2 Vag1382_28940 PF00140 Sigma-70 factor, region 1.2 Vag1382_28950 PF18075 FtsX extracellular domain Vag1382_28960 PF00005 ABC transporter Vag1382_28970 PF02881 SRP54-type protein, helical bundle domain Vag1382_28970 PF00448 SRP54-type protein, GTPase domain Vag1382_29000 PF01914 MarC family integral membrane protein Vag1382_29050 PF10694 Protein of unknown function (DUF2500) Vag1382_29090 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Vag1382_29090 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Vag1382_29100 PF01022 Bacterial regulatory protein, arsR family Vag1382_29110 PF08668 HDOD domain Vag1382_29110 PF00563 EAL domain Vag1382_29120 PF01810 LysE type translocator Vag1382_29130 PF12146 Serine aminopeptidase, S33 Vag1382_29180 PF00563 EAL domain Vag1382_29180 PF08495 FIST N domain Vag1382_29180 PF10442 FIST C domain Vag1382_29180 PF00990 Diguanylate cyclase, GGDEF domain Vag1382_29190 PF13419 Haloacid dehalogenase-like hydrolase Vag1382_29200 PF02899 Phage integrase, N-terminal SAM-like domain Vag1382_29200 PF00589 Phage integrase family Vag1382_29220 PF01678 Diaminopimelate epimerase Vag1382_29230 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Vag1382_29230 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain Vag1382_29240 PF01491 Frataxin-like domain Vag1382_29260 PF12633 Adenylate cyclase NT domain Vag1382_29260 PF01295 Adenylate cyclase, class-I Vag1382_29270 PF03900 Porphobilinogen deaminase, C-terminal domain Vag1382_29270 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain Vag1382_29280 PF02602 Uroporphyrinogen-III synthase HemD Vag1382_29290 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase Vag1382_29300 PF07219 HemY protein N-terminus Vag1382_29310 PF00175 Oxidoreductase NAD-binding domain Vag1382_29320 PF00111 2Fe-2S iron-sulfur cluster binding domain Vag1382_29330 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase Vag1382_29350 PF07497 Rho termination factor, RNA-binding domain Vag1382_29350 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Vag1382_29350 PF07498 Rho termination factor, N-terminal domain Vag1382_29360 PF00085 Thioredoxin Vag1382_29370 PF00271 Helicase conserved C-terminal domain Vag1382_29370 PF00270 DEAD/DEAH box helicase Vag1382_29380 PF02541 Ppx/GppA phosphatase family Vag1382_29390 PF02592 Putative vitamin uptake transporter Vag1382_29410 PF00270 DEAD/DEAH box helicase Vag1382_29410 PF00271 Helicase conserved C-terminal domain Vag1382_29410 PF16124 RecQ zinc-binding Vag1382_29410 PF00570 HRDC domain Vag1382_29410 PF09382 RQC domain Vag1382_29420 PF00892 EamA-like transporter family Vag1382_29440 PF01810 LysE type translocator Vag1382_29470 PF00580 UvrD/REP helicase N-terminal domain Vag1382_29470 PF13361 UvrD-like helicase C-terminal domain Vag1382_29490 PF05114 Protein of unknown function (DUF692) Vag1382_29530 PF07690 Major Facilitator Superfamily Vag1382_29540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vag1382_29540 PF03466 LysR substrate binding domain Vag1382_29550 PF01321 Creatinase/Prolidase N-terminal domain Vag1382_29550 PF00557 Metallopeptidase family M24 Vag1382_29550 PF00557 Metallopeptidase family M24 Vag1382_29550 PF01321 Creatinase/Prolidase N-terminal domain Vag1382_29560 PF04055 Radical SAM superfamily Vag1382_29560 PF06968 Biotin and Thiamin Synthesis associated domain Vag1382_29570 PF05690 Thiazole biosynthesis protein ThiG Vag1382_29590 PF00899 ThiF family Vag1382_29600 PF02581 Thiamine monophosphate synthase Vag1382_29610 PF01964 Radical SAM ThiC family Vag1382_29610 PF13667 ThiC-associated domain Vag1382_29620 PF02537 CrcB-like protein, Camphor Resistance (CrcB) Vag1382_29630 PF07732 Multicopper oxidase Vag1382_29630 PF07731 Multicopper oxidase Vag1382_29630 PF00394 Multicopper oxidase Vag1382_29640 PF00132 Bacterial transferase hexapeptide (six repeats) Vag1382_29650 PF07369 Protein of unknown function (DUF1488) Vag1382_29660 PF18317 Shikimate 5'-dehydrogenase C-terminal domain Vag1382_29660 PF01488 Shikimate / quinate 5-dehydrogenase Vag1382_29660 PF08501 Shikimate dehydrogenase substrate binding domain Vag1382_29670 PF01218 Coproporphyrinogen III oxidase Vag1382_29680 PF01300 Telomere recombination Vag1382_29690 PF00731 AIR carboxylase Vag1382_29700 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain Vag1382_29700 PF02222 ATP-grasp domain Vag1382_29710 PF01396 Topoisomerase DNA binding C4 zinc finger Vag1382_29720 PF04361 Protein of unknown function (DUF494) Vag1382_29730 PF17782 DprA winged helix domain Vag1382_29730 PF02481 DNA recombination-mediator protein A Vag1382_29750 PF01327 Polypeptide deformylase Vag1382_29760 PF02911 Formyl transferase, C-terminal domain Vag1382_29760 PF00551 Formyl transferase Vag1382_29770 PF01189 16S rRNA methyltransferase RsmB/F Vag1382_29770 PF01029 NusB family Vag1382_29780 PF01029 NusB family Vag1382_29780 PF01189 16S rRNA methyltransferase RsmB/F Vag1382_29790 PF02080 TrkA-C domain Vag1382_29790 PF02254 TrkA-N domain Vag1382_29800 PF02386 Cation transport protein Vag1382_29820 PF03006 Haemolysin-III related Vag1382_29830 PF07070 SpoOM protein Vag1382_29850 PF06288 Protein of unknown function (DUF1040) Vag1382_29860 PF12801 4Fe-4S binding domain Vag1382_29860 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase Vag1382_29860 PF13746 4Fe-4S dicluster domain Vag1382_29870 PF01636 Phosphotransferase enzyme family Vag1382_29880 PF01323 DSBA-like thioredoxin domain Vag1382_29890 PF01553 Acyltransferase Vag1382_29910 PF13335 Magnesium chelatase, subunit ChlI C-terminal Vag1382_29910 PF01078 Magnesium chelatase, subunit ChlI Vag1382_29920 PF00205 Thiamine pyrophosphate enzyme, central domain Vag1382_29920 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Vag1382_29920 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Vag1382_29940 PF01063 Amino-transferase class IV Vag1382_29950 PF00920 Dehydratase family Vag1382_29960 PF00291 Pyridoxal-phosphate dependent enzyme Vag1382_29960 PF00585 C-terminal regulatory domain of Threonine dehydratase Vag1382_29970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vag1382_29970 PF03466 LysR substrate binding domain Vag1382_29980 PF07690 Major Facilitator Superfamily Vag1382_29990 PF00497 Bacterial extracellular solute-binding proteins, family 3 Vag1382_30000 PF00528 Binding-protein-dependent transport system inner membrane component Vag1382_30010 PF00132 Bacterial transferase hexapeptide (six repeats) Vag1382_30010 PF12804 MobA-like NTP transferase domain Vag1382_30020 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain Vag1382_30020 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain Vag1382_30030 PF02874 ATP synthase alpha/beta family, beta-barrel domain Vag1382_30030 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Vag1382_30040 PF00231 ATP synthase Vag1382_30050 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Vag1382_30050 PF02874 ATP synthase alpha/beta family, beta-barrel domain Vag1382_30050 PF00306 ATP synthase alpha/beta chain, C terminal domain Vag1382_30060 PF00213 ATP synthase delta (OSCP) subunit Vag1382_30070 PF00430 ATP synthase B/B' CF(0) Vag1382_30080 PF00137 ATP synthase subunit C Vag1382_30090 PF00119 ATP synthase A chain Vag1382_30100 PF03899 ATP synthase I chain Vag1382_30110 PF17762 HTH domain found in ParB protein Vag1382_30110 PF02195 ParB-like nuclease domain Vag1382_30120 PF13614 AAA domain Vag1382_30130 PF02527 rRNA small subunit methyltransferase G Vag1382_30140 PF13932 GidA associated domain Vag1382_30140 PF01134 Glucose inhibited division protein A Vag1382_30150 PF00258 Flavodoxin Vag1382_30170 PF08448 PAS fold Vag1382_30170 PF00990 Diguanylate cyclase, GGDEF domain Vag1382_30180 PF08544 GHMP kinases C terminal Vag1382_30180 PF00288 GHMP kinases N terminal domain Vag1382_30180 PF10509 Galactokinase galactose-binding signature Vag1382_30190 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain Vag1382_30190 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain Vag1382_30200 PF16363 GDP-mannose 4,6 dehydratase Vag1382_30210 PF00474 Sodium:solute symporter family Vag1382_30220 PF16875 Glycosyl hydrolase family 36 N-terminal domain Vag1382_30220 PF16874 Glycosyl hydrolase family 36 C-terminal domain Vag1382_30230 PF00356 Bacterial regulatory proteins, lacI family Vag1382_30440 PF02899 Phage integrase, N-terminal SAM-like domain Vag1382_30440 PF00589 Phage integrase family Vag1382_30450 PF12631 MnmE helical domain Vag1382_30450 PF01926 50S ribosome-binding GTPase Vag1382_30450 PF10396 GTP-binding protein TrmE N-terminus Vag1382_30460 PF02096 60Kd inner membrane protein Vag1382_30460 PF14849 YidC periplasmic domain Vag1382_30470 PF00825 Ribonuclease P Vag1382_30480 PF00468 Ribosomal protein L34 Vag1382_30490 PF00005 ABC transporter Vag1382_30500 PF00528 Binding-protein-dependent transport system inner membrane component Vag1382_30510 PF00497 Bacterial extracellular solute-binding proteins, family 3 Vag1382_30540 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Vag1382_30540 PF00005 ABC transporter Vag1382_30550 PF00005 ABC transporter Vag1382_30550 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Vag1382_30570 PF08719 Domain of unknown function (DUF1768) Vag1382_30570 PF00925 GTP cyclohydrolase II Vag1382_30590 PF00672 HAMP domain Vag1382_30590 PF00072 Response regulator receiver domain Vag1382_30590 PF00512 His Kinase A (phospho-acceptor) domain Vag1382_30590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vag1382_30590 PF01627 Hpt domain Vag1382_30590 PF17149 Periplasmic sensor domain found in signal transduction proteins Vag1382_30610 PF01709 Transcriptional regulator Vag1382_30620 PF01098 Cell cycle protein Vag1382_30640 PF00005 ABC transporter Vag1382_30680 PF06580 Histidine kinase Vag1382_30680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vag1382_30680 PF13492 GAF domain Vag1382_30680 PF07694 5TMR of 5TMR-LYT Vag1382_30690 PF00072 Response regulator receiver domain Vag1382_30690 PF04397 LytTr DNA-binding domain Vag1382_30710 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Vag1382_30720 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Vag1382_30720 PF17200 Single Cache domain 2 Vag1382_30720 PF00672 HAMP domain Vag1382_30750 PF03616 Sodium/glutamate symporter Vag1382_30770 PF00005 ABC transporter Vag1382_30780 PF00155 Aminotransferase class I and II Vag1382_30780 PF00392 Bacterial regulatory proteins, gntR family Vag1382_30790 PF03616 Sodium/glutamate symporter Vag1382_30810 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase Vag1382_30840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vag1382_30840 PF03466 LysR substrate binding domain Vag1382_30850 PF02678 Pirin Vag1382_30850 PF17954 Quercetinase C-terminal cupin domain Vag1382_30860 PF07681 DoxX Vag1382_30880 PF00730 HhH-GPD superfamily base excision DNA repair protein Vag1382_30880 PF06029 AlkA N-terminal domain Vag1382_30890 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain Vag1382_30890 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain Vag1382_30910 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 Vag1382_30930 PF03600 Citrate transporter Vag1382_30970 PF12697 Alpha/beta hydrolase family Vag1382_30980 PF08329 Chitinase A, N-terminal domain Vag1382_30980 PF00704 Glycosyl hydrolases family 18 Vag1382_31000 PF06865 Pyrimidine/purine nucleoside phosphorylase Vag1382_31020 PF00563 EAL domain Vag1382_31020 PF00990 Diguanylate cyclase, GGDEF domain Vag1382_31020 PF03707 Bacterial signalling protein N terminal repeat Vag1382_31030 PF01554 MatE Vag1382_31040 PF00849 RNA pseudouridylate synthase Vag1382_31070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vag1382_31070 PF03466 LysR substrate binding domain Vag1382_31100 PF00990 Diguanylate cyclase, GGDEF domain Vag1382_31100 PF17152 Periplasmic sensor domain Vag1382_31120 PF00756 Putative esterase Vag1382_31130 PF00107 Zinc-binding dehydrogenase Vag1382_31130 PF08240 Alcohol dehydrogenase GroES-like domain Vag1382_31140 PF00797 N-acetyltransferase Vag1382_31150 PF03466 LysR substrate binding domain Vag1382_31150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vag1382_31160 PF08021 Siderophore-interacting FAD-binding domain Vag1382_31160 PF04954 Siderophore-interacting protein Vag1382_31170 PF00326 Prolyl oligopeptidase family Vag1382_31180 PF01810 LysE type translocator Vag1382_31190 PF01037 Lrp/AsnC ligand binding domain Vag1382_31200 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading Vag1382_31200 PF18416 N-acetylglucosamine binding protein domain 2 Vag1382_31230 PF13599 Pentapeptide repeats (9 copies) Vag1382_31240 PF03922 OmpW family Vag1382_31250 PF13533 Biotin-lipoyl like Vag1382_31260 PF07690 Major Facilitator Superfamily Vag1382_31280 PF12706 Beta-lactamase superfamily domain Vag1382_31300 PF01204 Trehalase Vag1382_31310 PF01661 Macro domain Vag1382_31320 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Vag1382_31330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vag1382_31330 PF03466 LysR substrate binding domain Vag1382_31350 PF03466 LysR substrate binding domain Vag1382_31350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vag1382_31380 PF13419 Haloacid dehalogenase-like hydrolase Vag1382_31430 PF05651 Putative sugar diacid recognition Vag1382_31430 PF17853 GGDEF-like domain Vag1382_31430 PF13556 PucR C-terminal helix-turn-helix domain Vag1382_31440 PF02447 GntP family permease Vag1382_31450 PF02595 Glycerate kinase family Vag1382_31460 PF00155 Aminotransferase class I and II Vag1382_31460 PF00392 Bacterial regulatory proteins, gntR family Vag1382_31500 PF00583 Acetyltransferase (GNAT) family Vag1382_31540 PF13302 Acetyltransferase (GNAT) domain Vag1382_31550 PF03264 NapC/NirT cytochrome c family, N-terminal region Vag1382_31560 PF00384 Molybdopterin oxidoreductase Vag1382_31560 PF01568 Molydopterin dinucleotide binding domain Vag1382_31560 PF18364 Molybdopterin oxidoreductase N-terminal domain Vag1382_31580 PF02581 Thiamine monophosphate synthase Vag1382_31590 PF02110 Hydroxyethylthiazole kinase family Vag1382_31600 PF03070 TENA/THI-4/PQQC family Vag1382_31610 PF09084 NMT1/THI5 like Vag1382_31620 PF00528 Binding-protein-dependent transport system inner membrane component Vag1382_31630 PF00005 ABC transporter Vag1382_31640 PF08543 Phosphomethylpyrimidine kinase Vag1382_31650 PF01523 Putative modulator of DNA gyrase Vag1382_31660 PF01523 Putative modulator of DNA gyrase Vag1382_31670 PF04013 Putative SAM-dependent RNA methyltransferase Vag1382_31710 PF10928 Protein of unknown function (DUF2810) Vag1382_31720 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Vag1382_31720 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Vag1382_31740 PF03009 Glycerophosphoryl diester phosphodiesterase family Vag1382_31750 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain Vag1382_31750 PF00056 lactate/malate dehydrogenase, NAD binding domain Vag1382_31760 PF00072 Response regulator receiver domain Vag1382_31760 PF00486 Transcriptional regulatory protein, C terminal Vag1382_31770 PF00672 HAMP domain Vag1382_31770 PF16750 Sensor domain of 2-component histidine kinase Vag1382_31770 PF00512 His Kinase A (phospho-acceptor) domain Vag1382_31770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vag1382_31780 PF00593 TonB dependent receptor Vag1382_31780 PF07715 TonB-dependent Receptor Plug Domain Vag1382_31800 PF01618 MotA/TolQ/ExbB proton channel family Vag1382_31810 PF01618 MotA/TolQ/ExbB proton channel family Vag1382_31820 PF02472 Biopolymer transport protein ExbD/TolR Vag1382_31910 PF01297 Zinc-uptake complex component A periplasmic Vag1382_31920 PF00005 ABC transporter Vag1382_31930 PF00950 ABC 3 transport family Vag1382_31960 PF00326 Prolyl oligopeptidase family Vag1382_31960 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain Vag1382_31970 PF07690 Major Facilitator Superfamily Vag1382_31980 PF00491 Arginase family Vag1382_31990 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Vag1382_31990 PF17944 Arginine decarboxylase C-terminal helical extension Vag1382_31990 PF17810 Arginine decarboxylase helical bundle domain Vag1382_32000 PF00753 Metallo-beta-lactamase superfamily Vag1382_32010 PF08443 RimK-like ATP-grasp domain Vag1382_32010 PF18030 RimK PreATP-grasp domain Vag1382_32020 PF08443 RimK-like ATP-grasp domain Vag1382_32020 PF18030 RimK PreATP-grasp domain Vag1382_32030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vag1382_32030 PF03466 LysR substrate binding domain Vag1382_32080 PF00232 Glycosyl hydrolase family 1 Vag1382_32100 PF00512 His Kinase A (phospho-acceptor) domain Vag1382_32100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vag1382_32110 PF00072 Response regulator receiver domain Vag1382_32110 PF00158 Sigma-54 interaction domain Vag1382_32110 PF02954 Bacterial regulatory protein, Fis family Vag1382_32120 PF00990 Diguanylate cyclase, GGDEF domain Vag1382_32130 PF05525 Branched-chain amino acid transport protein Vag1382_32160 PF01266 FAD dependent oxidoreductase Vag1382_32180 PF02322 Cytochrome bd terminal oxidase subunit II Vag1382_32190 PF01654 Cytochrome bd terminal oxidase subunit I Vag1382_32200 PF03116 NQR2, RnfD, RnfE family Vag1382_32210 PF01212 Beta-eliminating lyase Vag1382_32230 PF07670 Nucleoside recognition Vag1382_32230 PF07662 Na+ dependent nucleoside transporter C-terminus Vag1382_32230 PF01773 Na+ dependent nucleoside transporter N-terminus Vag1382_32260 PF00990 Diguanylate cyclase, GGDEF domain Vag1382_32260 PF05230 MASE2 domain Vag1382_32290 PF00990 Diguanylate cyclase, GGDEF domain Vag1382_32300 PF00875 DNA photolyase Vag1382_32300 PF03441 FAD binding domain of DNA photolyase Vag1382_32310 PF04244 Deoxyribodipyrimidine photo-lyase-related protein Vag1382_32330 PF01641 SelR domain Vag1382_32330 PF01625 Peptide methionine sulfoxide reductase Vag1382_32340 PF02566 OsmC-like protein Vag1382_32350 PF14602 Hexapeptide repeat of succinyl-transferase Vag1382_32350 PF12464 Maltose acetyltransferase Vag1382_32420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vag1382_32420 PF03466 LysR substrate binding domain Vag1382_32430 PF13419 Haloacid dehalogenase-like hydrolase Vag1382_32460 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) Vag1382_32470 PF00194 Eukaryotic-type carbonic anhydrase Vag1382_32480 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) Vag1382_32490 PF00657 GDSL-like Lipase/Acylhydrolase Vag1382_32500 PF05922 Peptidase inhibitor I9 Vag1382_32500 PF00082 Subtilase family Vag1382_32520 PF03611 PTS system sugar-specific permease component Vag1382_32540 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 Vag1382_32550 PF00356 Bacterial regulatory proteins, lacI family Vag1382_32560 PF13419 Haloacid dehalogenase-like hydrolase Vag1382_32580 PF00266 Aminotransferase class-V Vag1382_32600 PF00005 ABC transporter Vag1382_32610 PF00528 Binding-protein-dependent transport system inner membrane component Vag1382_32620 PF00392 Bacterial regulatory proteins, gntR family Vag1382_32620 PF07702 UTRA domain Vag1382_32650 PF04393 Protein of unknown function (DUF535) Vag1382_32670 PF01266 FAD dependent oxidoreductase Vag1382_32680 PF18027 Cytosolic carboxypeptidase N-terminal domain Vag1382_32680 PF00246 Zinc carboxypeptidase Vag1382_32690 PF01389 OmpA-like transmembrane domain Vag1382_32690 PF00691 OmpA family Vag1382_32700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vag1382_32700 PF03466 LysR substrate binding domain Vag1382_32720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vag1382_32720 PF03466 LysR substrate binding domain Vag1382_32740 PF00854 POT family Vag1382_32750 PF03315 Serine dehydratase beta chain Vag1382_32750 PF03313 Serine dehydratase alpha chain Vag1382_32790 PF00133 tRNA synthetases class I (I, L, M and V) Vag1382_32790 PF08264 Anticodon-binding domain of tRNA Vag1382_32800 PF01464 Transglycosylase SLT domain Vag1382_32840 PF00460 Flagella basal body rod protein Vag1382_32850 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Vag1382_32850 PF00460 Flagella basal body rod protein Vag1382_32860 PF13860 FlgD Ig-like domain Vag1382_32860 PF03963 Flagellar hook capping protein - N-terminal region Vag1382_32860 PF13861 FlgD Tudor-like domain Vag1382_32870 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Vag1382_32870 PF00460 Flagella basal body rod protein Vag1382_32870 PF07559 Flagellar basal body protein FlaE Vag1382_32880 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Vag1382_32880 PF00460 Flagella basal body rod protein Vag1382_32890 PF00460 Flagella basal body rod protein Vag1382_32890 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Vag1382_32900 PF02107 Flagellar L-ring protein Vag1382_32910 PF02119 Flagellar P-ring protein Vag1382_32920 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase Vag1382_32920 PF10135 Rod binding protein Vag1382_32930 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Vag1382_32930 PF00460 Flagella basal body rod protein Vag1382_32940 PF00669 Bacterial flagellin N-terminal helical region Vag1382_32980 PF01070 FMN-dependent dehydrogenase Vag1382_33010 PF00581 Rhodanese-like domain Vag1382_33020 PF00166 Chaperonin 10 Kd subunit Vag1382_33030 PF00118 TCP-1/cpn60 chaperonin family Vag1382_33060 PF01810 LysE type translocator Vag1382_33070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vag1382_33070 PF03466 LysR substrate binding domain Vag1382_33100 PF08359 YsiA-like protein, C-terminal region Vag1382_33100 PF00440 Bacterial regulatory proteins, tetR family Vag1382_33110 PF12833 Helix-turn-helix domain Vag1382_33120 PF06751 Ethanolamine ammonia lyase large subunit (EutB) Vag1382_33130 PF05985 Ethanolamine ammonia-lyase light chain (EutC) Vag1382_33140 PF13520 Amino acid permease Vag1382_33150 PF03060 Nitronate monooxygenase Vag1382_33160 PF07971 Glycosyl hydrolase family 92 Vag1382_33160 PF17678 Glycosyl hydrolase family 92 N-terminal domain Vag1382_33170 PF17678 Glycosyl hydrolase family 92 N-terminal domain Vag1382_33170 PF07971 Glycosyl hydrolase family 92 Vag1382_33190 PF17678 Glycosyl hydrolase family 92 N-terminal domain Vag1382_33190 PF07971 Glycosyl hydrolase family 92 Vag1382_33200 PF17678 Glycosyl hydrolase family 92 N-terminal domain Vag1382_33200 PF07971 Glycosyl hydrolase family 92 Vag1382_33230 PF01625 Peptide methionine sulfoxide reductase Vag1382_33230 PF01641 SelR domain Vag1382_33240 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Vag1382_33250 PF08220 DeoR-like helix-turn-helix domain Vag1382_33250 PF00455 DeoR C terminal sensor domain Vag1382_33270 PF00857 Isochorismatase family Vag1382_33290 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family Vag1382_33290 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain Vag1382_33340 PF03466 LysR substrate binding domain Vag1382_33340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vag1382_33370 PF06629 MltA-interacting protein MipA Vag1382_33380 PF04170 NlpE N-terminal domain Vag1382_33380 PF17185 NlpE C-terminal OB domain Vag1382_33390 PF00005 ABC transporter Vag1382_33390 PF00571 CBS domain Vag1382_33400 PF00528 Binding-protein-dependent transport system inner membrane component Vag1382_33410 PF02001 Protein of unknown function DUF134 Vag1382_33460 PF00009 Elongation factor Tu GTP binding domain Vag1382_33460 PF03764 Elongation factor G, domain IV Vag1382_33460 PF03144 Elongation factor Tu domain 2 Vag1382_33460 PF00679 Elongation factor G C-terminus Vag1382_33460 PF14492 Elongation Factor G, domain II Vag1382_33470 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Vag1382_33470 PF13378 Enolase C-terminal domain-like Vag1382_33490 PF03466 LysR substrate binding domain Vag1382_33490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vag1382_33510 PF09278 MerR, DNA binding Vag1382_33510 PF00376 MerR family regulatory protein Vag1382_33560 PF13091 PLD-like domain Vag1382_33580 PF00873 AcrB/AcrD/AcrF family Vag1382_33630 PF00005 ABC transporter Vag1382_33630 PF08402 TOBE domain Vag1382_33680 PF07702 UTRA domain Vag1382_33680 PF00392 Bacterial regulatory proteins, gntR family Vag1382_33690 PF02028 BCCT, betaine/carnitine/choline family transporter Vag1382_33710 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 Vag1382_33710 PF02837 Glycosyl hydrolases family 2, sugar binding domain Vag1382_33710 PF02836 Glycosyl hydrolases family 2, TIM barrel domain Vag1382_33710 PF00703 Glycosyl hydrolases family 2 Vag1382_33740 PF00873 AcrB/AcrD/AcrF family Vag1382_33750 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Vag1382_33760 PF03466 LysR substrate binding domain Vag1382_33760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vag1382_33780 PF00579 tRNA synthetases class I (W and Y) Vag1382_33790 PF00196 Bacterial regulatory proteins, luxR family Vag1382_33790 PF00072 Response regulator receiver domain Vag1382_33810 PF02896 PEP-utilising enzyme, TIM barrel domain Vag1382_33810 PF00391 PEP-utilising enzyme, mobile domain Vag1382_33810 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain Vag1382_33820 PF03618 Kinase/pyrophosphorylase Vag1382_33830 PF00710 Asparaginase, N-terminal Vag1382_33830 PF17763 Glutaminase/Asparaginase C-terminal domain Vag1382_33850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vag1382_33850 PF03466 LysR substrate binding domain Vag1382_33870 PF01810 LysE type translocator Vag1382_33880 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) Vag1382_33900 PF02423 Ornithine cyclodeaminase/mu-crystallin family Vag1382_33910 PF00291 Pyridoxal-phosphate dependent enzyme Vag1382_33920 PF00202 Aminotransferase class-III Vag1382_33930 PF00171 Aldehyde dehydrogenase family Vag1382_33940 PF01037 Lrp/AsnC ligand binding domain Vag1382_33950 PF03480 Bacterial extracellular solute-binding protein, family 7 Vag1382_33960 PF03480 Bacterial extracellular solute-binding protein, family 7 Vag1382_33970 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family Vag1382_33980 PF00557 Metallopeptidase family M24 Vag1382_33980 PF01321 Creatinase/Prolidase N-terminal domain Vag1382_33990 PF00155 Aminotransferase class I and II Vag1382_33990 PF00392 Bacterial regulatory proteins, gntR family Vag1382_34000 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component Vag1382_34010 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Vag1382_34020 PF12833 Helix-turn-helix domain Vag1382_34050 PF08240 Alcohol dehydrogenase GroES-like domain Vag1382_34050 PF00107 Zinc-binding dehydrogenase Vag1382_34060 PF00724 NADH:flavin oxidoreductase / NADH oxidase family Vag1382_34080 PF03466 LysR substrate binding domain Vag1382_34080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vag1382_34090 PF03466 LysR substrate binding domain Vag1382_34090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vag1382_34110 PF00271 Helicase conserved C-terminal domain Vag1382_34110 PF00270 DEAD/DEAH box helicase Vag1382_34150 PF00155 Aminotransferase class I and II Vag1382_34160 PF01497 Periplasmic binding protein Vag1382_34160 PF12833 Helix-turn-helix domain Vag1382_34280 PF11471 Maltoporin periplasmic N-terminal extension Vag1382_34280 PF02264 LamB porin Vag1382_34290 PF00356 Bacterial regulatory proteins, lacI family Vag1382_34300 PF00367 phosphotransferase system, EIIB Vag1382_34300 PF02378 Phosphotransferase system, EIIC Vag1382_34310 PF00294 pfkB family carbohydrate kinase Vag1382_34320 PF08244 Glycosyl hydrolases family 32 C terminal Vag1382_34320 PF00251 Glycosyl hydrolases family 32 N-terminal domain Vag1382_34330 PF02798 Glutathione S-transferase, N-terminal domain Vag1382_34350 PF00768 D-alanyl-D-alanine carboxypeptidase Vag1382_34350 PF07943 Penicillin-binding protein 5, C-terminal domain Vag1382_34380 PF08534 Redoxin Vag1382_34380 PF00462 Glutaredoxin Vag1382_34390 PF00962 Adenosine/AMP deaminase Vag1382_34400 PF00962 Adenosine/AMP deaminase Vag1382_34430 PF00313 'Cold-shock' DNA-binding domain Vag1382_34440 PF02678 Pirin Vag1382_34440 PF05726 Pirin C-terminal cupin domain Vag1382_34450 PF01734 Patatin-like phospholipase Vag1382_34490 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Vag1382_34500 PF08019 Phosphoethanolamine transferase EptA/EptB Vag1382_34500 PF00884 Sulfatase Vag1382_34510 PF01219 Prokaryotic diacylglycerol kinase Vag1382_34530 PF00672 HAMP domain Vag1382_34530 PF16527 Two-component sensor protein CpxA, periplasmic domain Vag1382_34530 PF00512 His Kinase A (phospho-acceptor) domain Vag1382_34530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vag1382_34540 PF00072 Response regulator receiver domain Vag1382_34540 PF00486 Transcriptional regulatory protein, C terminal Vag1382_34570 PF01323 DSBA-like thioredoxin domain Vag1382_34600 PF00255 Glutathione peroxidase Vag1382_34610 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase Vag1382_34630 PF07690 Major Facilitator Superfamily Vag1382_34650 PF01966 HD domain Vag1382_34660 PF07969 Amidohydrolase family Vag1382_34670 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin Vag1382_34680 PF01769 Divalent cation transporter Vag1382_34680 PF00571 CBS domain Vag1382_34680 PF03448 MgtE intracellular N domain Vag1382_34690 PF03109 ABC1 family Vag1382_34700 PF00529 HlyD membrane-fusion protein of T1SS Vag1382_34700 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Vag1382_34750 PF00486 Transcriptional regulatory protein, C terminal Vag1382_34750 PF00072 Response regulator receiver domain Vag1382_34760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vag1382_34760 PF00512 His Kinase A (phospho-acceptor) domain Vag1382_34760 PF16527 Two-component sensor protein CpxA, periplasmic domain Vag1382_34760 PF00672 HAMP domain Vag1382_34780 PF00155 Aminotransferase class I and II Vag1382_34780 PF00392 Bacterial regulatory proteins, gntR family Vag1382_34790 PF13520 Amino acid permease Vag1382_34810 PF03466 LysR substrate binding domain Vag1382_34810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vag1382_34850 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Vag1382_34850 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Vag1382_34860 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) Vag1382_34860 PF00672 HAMP domain Vag1382_34860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vag1382_34860 PF00512 His Kinase A (phospho-acceptor) domain Vag1382_34860 PF01627 Hpt domain Vag1382_34860 PF00072 Response regulator receiver domain Vag1382_34870 PF01554 MatE Vag1382_34880 PF04363 Protein of unknown function (DUF496) Vag1382_34900 PF04337 Protein of unknown function, DUF480 Vag1382_34910 PF01541 GIY-YIG catalytic domain Vag1382_34920 PF13407 Periplasmic binding protein domain Vag1382_34930 PF00072 Response regulator receiver domain Vag1382_34930 PF00512 His Kinase A (phospho-acceptor) domain Vag1382_34930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vag1382_34930 PF09308 LuxQ, periplasmic Vag1382_34950 PF00529 HlyD membrane-fusion protein of T1SS Vag1382_34950 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Vag1382_34990 PF01037 Lrp/AsnC ligand binding domain Vag1382_35040 PF13721 SecD export protein N-terminal TM region Vag1382_35040 PF02355 Protein export membrane protein Vag1382_35040 PF07549 SecD/SecF GG Motif Vag1382_35050 PF07549 SecD/SecF GG Motif Vag1382_35050 PF02355 Protein export membrane protein Vag1382_35070 PF01810 LysE type translocator Vag1382_35080 PF00106 short chain dehydrogenase Vag1382_35090 PF00108 Thiolase, N-terminal domain Vag1382_35090 PF02803 Thiolase, C-terminal domain Vag1382_35110 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus Vag1382_35130 PF03264 NapC/NirT cytochrome c family, N-terminal region Vag1382_35140 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) Vag1382_35150 PF01568 Molydopterin dinucleotide binding domain Vag1382_35150 PF00384 Molybdopterin oxidoreductase Vag1382_35150 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Vag1382_35170 PF13187 4Fe-4S dicluster domain Vag1382_35170 PF12838 4Fe-4S dicluster domain Vag1382_35180 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term Vag1382_35180 PF07730 Histidine kinase Vag1382_35180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vag1382_35180 PF00672 HAMP domain Vag1382_35190 PF00072 Response regulator receiver domain Vag1382_35190 PF00196 Bacterial regulatory proteins, luxR family Vag1382_35220 PF01546 Peptidase family M20/M25/M40 Vag1382_35220 PF07687 Peptidase dimerisation domain Vag1382_35230 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Vag1382_35240 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Vag1382_35250 PF00873 AcrB/AcrD/AcrF family Vag1382_35260 PF17200 Single Cache domain 2 Vag1382_35260 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Vag1382_35260 PF00672 HAMP domain Vag1382_35270 PF00472 RF-1 domain Vag1382_35280 PF13419 Haloacid dehalogenase-like hydrolase Vag1382_35290 PF01389 OmpA-like transmembrane domain Vag1382_35290 PF00691 OmpA family Vag1382_35300 PF00793 DAHP synthetase I family Vag1382_35310 PF07690 Major Facilitator Superfamily Vag1382_35320 PF08447 PAS fold Vag1382_35320 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Vag1382_35330 PF00456 Transketolase, thiamine diphosphate binding domain Vag1382_35330 PF02780 Transketolase, C-terminal domain Vag1382_35330 PF02779 Transketolase, pyrimidine binding domain Vag1382_35340 PF00923 Transaldolase/Fructose-6-phosphate aldolase Vag1382_35360 PF00704 Glycosyl hydrolases family 18 Vag1382_35360 PF08329 Chitinase A, N-terminal domain Vag1382_35370 PF03707 Bacterial signalling protein N terminal repeat Vag1382_35370 PF00990 Diguanylate cyclase, GGDEF domain Vag1382_35370 PF00563 EAL domain Vag1382_35380 PF00581 Rhodanese-like domain Vag1382_35420 PF00899 ThiF family Vag1382_35430 PF00994 Probable molybdopterin binding domain Vag1382_35430 PF03454 MoeA C-terminal region (domain IV) Vag1382_35430 PF03453 MoeA N-terminal region (domain I and II) Vag1382_35440 PF01227 GTP cyclohydrolase I Vag1382_35450 PF01566 Natural resistance-associated macrophage protein Vag1382_35470 PF00654 Voltage gated chloride channel Vag1382_35500 PF00248 Aldo/keto reductase family Vag1382_35510 PF00072 Response regulator receiver domain Vag1382_35530 PF03853 YjeF-related protein N-terminus Vag1382_35530 PF01256 Carbohydrate kinase Vag1382_35540 PF00478 IMP dehydrogenase / GMP reductase domain Vag1382_35550 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Vag1382_35560 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II Vag1382_35560 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase Vag1382_35560 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Vag1382_35570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vag1382_35570 PF03466 LysR substrate binding domain Vag1382_35580 PF01551 Peptidase family M23 Vag1382_35580 PF08525 Opacity-associated protein A N-terminal motif Vag1382_35580 PF01476 LysM domain Vag1382_35640 PF00072 Response regulator receiver domain Vag1382_35640 PF02954 Bacterial regulatory protein, Fis family Vag1382_35640 PF00158 Sigma-54 interaction domain Vag1382_35650 PF10431 C-terminal, D2-small domain, of ClpB protein Vag1382_35650 PF17871 AAA lid domain Vag1382_35650 PF07724 AAA domain (Cdc48 subfamily) Vag1382_35650 PF00004 ATPase family associated with various cellular activities (AAA) Vag1382_35660 PF05638 Type VI secretion system effector, Hcp Vag1382_35670 PF04717 Type VI secretion system, phage-baseplate injector Vag1382_35720 PF00069 Protein kinase domain Vag1382_35790 PF01037 Lrp/AsnC ligand binding domain Vag1382_35920 PF02129 X-Pro dipeptidyl-peptidase (S15 family) Vag1382_35930 PF07690 Major Facilitator Superfamily Vag1382_35950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vag1382_35950 PF03466 LysR substrate binding domain Vag1382_35960 PF00106 short chain dehydrogenase Vag1382_35970 PF00582 Universal stress protein family Vag1382_35990 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter Vag1382_35990 PF00361 Proton-conducting membrane transporter Vag1382_35990 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Vag1382_35990 PF13244 Domain of unknown function (DUF4040) Vag1382_36030 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) Vag1382_36040 PF03334 Na+/H+ antiporter subunit Vag1382_36050 PF13193 AMP-binding enzyme C-terminal domain Vag1382_36050 PF00501 AMP-binding enzyme Vag1382_36060 PF00766 Electron transfer flavoprotein FAD-binding domain Vag1382_36060 PF01012 Electron transfer flavoprotein domain Vag1382_36070 PF01012 Electron transfer flavoprotein domain Vag1382_36090 PF01348 Type II intron maturase Vag1382_36090 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) Vag1382_36100 PF00005 ABC transporter Vag1382_36100 PF12399 Branched-chain amino acid ATP-binding cassette transporter Vag1382_36150 PF00005 ABC transporter Vag1382_36160 PF00501 AMP-binding enzyme Vag1382_36160 PF14535 AMP-binding enzyme C-terminal domain Vag1382_36180 PF02028 BCCT, betaine/carnitine/choline family transporter Vag1382_36190 PF00106 short chain dehydrogenase Vag1382_36200 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Vag1382_36200 PF00205 Thiamine pyrophosphate enzyme, central domain Vag1382_36200 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Vag1382_36210 PF03306 Alpha-acetolactate decarboxylase Vag1382_36220 PF03466 LysR substrate binding domain Vag1382_36220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vag1382_36250 PF13086 AAA domain Vag1382_36250 PF13087 AAA domain Vag1382_36250 PF13195 Protein of unknown function (DUF4011) Vag1382_36250 PF13086 AAA domain Vag1382_36250 PF13195 Protein of unknown function (DUF4011) Vag1382_36250 PF13087 AAA domain Vag1382_36270 PF02567 Phenazine biosynthesis-like protein Vag1382_36290 PF02322 Cytochrome bd terminal oxidase subunit II Vag1382_36300 PF01654 Cytochrome bd terminal oxidase subunit I Vag1382_36310 PF00155 Aminotransferase class I and II Vag1382_36310 PF00392 Bacterial regulatory proteins, gntR family Vag1382_36350 PF00672 HAMP domain Vag1382_36350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vag1382_36350 PF00512 His Kinase A (phospho-acceptor) domain Vag1382_36350 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) Vag1382_36350 PF00072 Response regulator receiver domain Vag1382_36350 PF01627 Hpt domain Vag1382_36360 PF00682 HMGL-like Vag1382_36370 PF02785 Biotin carboxylase C-terminal domain Vag1382_36370 PF00364 Biotin-requiring enzyme Vag1382_36370 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Vag1382_36370 PF18140 Propionyl-coenzyme A carboxylase BT domain Vag1382_36370 PF00289 Biotin carboxylase, N-terminal domain Vag1382_36380 PF00378 Enoyl-CoA hydratase/isomerase Vag1382_36390 PF01039 Carboxyl transferase domain Vag1382_36400 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Vag1382_36400 PF02770 Acyl-CoA dehydrogenase, middle domain Vag1382_36400 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Vag1382_36410 PF09278 MerR, DNA binding Vag1382_36410 PF00376 MerR family regulatory protein Vag1382_36420 PF00108 Thiolase, N-terminal domain Vag1382_36420 PF02803 Thiolase, C-terminal domain Vag1382_36430 PF00171 Aldehyde dehydrogenase family Vag1382_36440 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Vag1382_36440 PF02770 Acyl-CoA dehydrogenase, middle domain Vag1382_36440 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Vag1382_36450 PF00378 Enoyl-CoA hydratase/isomerase Vag1382_36470 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase Vag1382_36470 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase Vag1382_36490 PF00990 Diguanylate cyclase, GGDEF domain Vag1382_36490 PF00072 Response regulator receiver domain Vag1382_36500 PF13977 BetI-type transcriptional repressor, C-terminal Vag1382_36500 PF00440 Bacterial regulatory proteins, tetR family Vag1382_36510 PF00171 Aldehyde dehydrogenase family Vag1382_36520 PF05199 GMC oxidoreductase Vag1382_36520 PF00732 GMC oxidoreductase Vag1382_36530 PF04069 Substrate binding domain of ABC-type glycine betaine transport system Vag1382_36540 PF00528 Binding-protein-dependent transport system inner membrane component Vag1382_36550 PF00571 CBS domain Vag1382_36550 PF00005 ABC transporter Vag1382_36560 PF00881 Nitroreductase family Vag1382_36580 PF16200 C-terminal region of band_7 Vag1382_36580 PF01145 SPFH domain / Band 7 family Vag1382_36610 PF00563 EAL domain Vag1382_36610 PF00990 Diguanylate cyclase, GGDEF domain Vag1382_36610 PF13188 PAS domain Vag1382_36610 PF03707 Bacterial signalling protein N terminal repeat Vag1382_36630 PF00034 Cytochrome c Vag1382_36630 PF03150 Di-haem cytochrome c peroxidase Vag1382_36640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vag1382_36640 PF00512 His Kinase A (phospho-acceptor) domain Vag1382_36640 PF09308 LuxQ, periplasmic Vag1382_36640 PF00072 Response regulator receiver domain Vag1382_36660 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Vag1382_36660 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain Vag1382_36680 PF04116 Fatty acid hydroxylase superfamily Vag1382_36750 PF00563 EAL domain Vag1382_36750 PF00990 Diguanylate cyclase, GGDEF domain Vag1382_36760 PF05025 RbsD / FucU transport protein family Vag1382_36770 PF00005 ABC transporter Vag1382_36780 PF02653 Branched-chain amino acid transport system / permease component Vag1382_36790 PF13407 Periplasmic binding protein domain Vag1382_36800 PF00294 pfkB family carbohydrate kinase Vag1382_36810 PF00356 Bacterial regulatory proteins, lacI family Vag1382_36830 PF04973 Nicotinamide mononucleotide transporter Vag1382_36840 PF01048 Phosphorylase superfamily Vag1382_36860 PF01497 Periplasmic binding protein Vag1382_36870 PF01032 FecCD transport family Vag1382_36880 PF01032 FecCD transport family Vag1382_36890 PF00005 ABC transporter Vag1382_36900 PF13411 MerR HTH family regulatory protein Vag1382_36910 PF12833 Helix-turn-helix domain Vag1382_36920 PF07715 TonB-dependent Receptor Plug Domain Vag1382_36920 PF00593 TonB dependent receptor Vag1382_36980 PF12805 FUSC-like inner membrane protein yccS Vag1382_36990 PF00580 UvrD/REP helicase N-terminal domain Vag1382_36990 PF13361 UvrD-like helicase C-terminal domain Vag1382_36990 PF12462 DNA helicase IV / RNA helicase N terminal Vag1382_37000 PF02142 MGS-like domain Vag1382_37010 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family Vag1382_37020 PF00072 Response regulator receiver domain Vag1382_37020 PF01627 Hpt domain Vag1382_37020 PF00512 His Kinase A (phospho-acceptor) domain Vag1382_37020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vag1382_37020 PF00672 HAMP domain Vag1382_37050 PF00072 Response regulator receiver domain Vag1382_37050 PF00486 Transcriptional regulatory protein, C terminal Vag1382_37060 PF00884 Sulfatase Vag1382_37070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vag1382_37070 PF03466 LysR substrate binding domain Vag1382_37080 PF00884 Sulfatase Vag1382_37080 PF16385 Domain of unknown function Vag1382_37090 PF13186 Iron-sulfur cluster-binding domain Vag1382_37090 PF04055 Radical SAM superfamily Vag1382_37100 PF07726 ATPase family associated with various cellular activities (AAA) Vag1382_37100 PF17863 AAA lid domain Vag1382_37130 PF00092 von Willebrand factor type A domain Vag1382_37160 PF01872 RibD C-terminal domain Vag1382_37160 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Vag1382_37170 PF03466 LysR substrate binding domain Vag1382_37170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vag1382_37180 PF00781 Diacylglycerol kinase catalytic domain Vag1382_37190 PF04076 Bacterial OB fold (BOF) protein Vag1382_37210 PF18081 Fanconi anemia-associated nuclease SAP domain Vag1382_37210 PF08774 VRR-NUC domain Vag1382_37250 PF01435 Peptidase family M48 Vag1382_37260 PF04011 LemA family Vag1382_37270 PF03606 C4-dicarboxylate anaerobic carrier Vag1382_37290 PF00814 Glycoprotease family Vag1382_37290 PF00583 Acetyltransferase (GNAT) family Vag1382_37310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vag1382_37310 PF00072 Response regulator receiver domain Vag1382_37320 PF00155 Aminotransferase class I and II Vag1382_37330 PF01926 50S ribosome-binding GTPase Vag1382_37340 PF00563 EAL domain Vag1382_37340 PF00990 Diguanylate cyclase, GGDEF domain Vag1382_37340 PF03707 Bacterial signalling protein N terminal repeat Vag1382_37350 PF08448 PAS fold Vag1382_37350 PF00990 Diguanylate cyclase, GGDEF domain Vag1382_37370 PF00072 Response regulator receiver domain Vag1382_37370 PF00196 Bacterial regulatory proteins, luxR family Vag1382_37380 PF00072 Response regulator receiver domain Vag1382_37380 PF01584 CheW-like domain Vag1382_37410 PF00892 EamA-like transporter family Vag1382_37450 PF02868 Thermolysin metallopeptidase, alpha-helical domain Vag1382_37450 PF04151 Bacterial pre-peptidase C-terminal domain Vag1382_37450 PF03413 Peptidase propeptide and YPEB domain Vag1382_37450 PF07504 Fungalysin/Thermolysin Propeptide Motif Vag1382_37450 PF01447 Thermolysin metallopeptidase, catalytic domain Vag1382_37460 PF00893 Small Multidrug Resistance protein Vag1382_37470 PF00892 EamA-like transporter family Vag1382_37500 PF00171 Aldehyde dehydrogenase family Vag1382_37510 PF00939 Sodium:sulfate symporter transmembrane region Vag1382_37520 PF17203 Single cache domain 3 Vag1382_37520 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain Vag1382_37520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vag1382_37520 PF00989 PAS fold Vag1382_37530 PF00072 Response regulator receiver domain Vag1382_37530 PF12431 Transcriptional regulator Vag1382_37550 PF13187 4Fe-4S dicluster domain Vag1382_37550 PF01645 Conserved region in glutamate synthase Vag1382_37560 PF00141 Peroxidase Vag1382_37570 PF09722 Protein of unknown function (DUF2384) Vag1382_37590 PF01757 Acyltransferase family Vag1382_37610 PF00724 NADH:flavin oxidoreductase / NADH oxidase family Vag1382_37620 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Vag1382_37660 PF01769 Divalent cation transporter Vag1382_37660 PF00571 CBS domain Vag1382_37660 PF03448 MgtE intracellular N domain Vag1382_37700 PF01327 Polypeptide deformylase Vag1382_37710 PF09278 MerR, DNA binding Vag1382_37710 PF00376 MerR family regulatory protein Vag1382_37730 PF02253 Phospholipase A1 Vag1382_37770 PF00664 ABC transporter transmembrane region Vag1382_37770 PF00005 ABC transporter Vag1382_37780 PF00929 Exonuclease Vag1382_37780 PF17657 Bacterial DNA polymerase III alpha subunit finger domain Vag1382_37780 PF14579 Helix-hairpin-helix motif Vag1382_37780 PF11490 DNA polymerase III polC-type N-terminus II Vag1382_37780 PF02811 PHP domain Vag1382_37780 PF07733 Bacterial DNA polymerase III alpha NTPase domain Vag1382_37830 PF12833 Helix-turn-helix domain Vag1382_37840 PF02627 Carboxymuconolactone decarboxylase family Vag1382_37850 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Vag1382_37860 PF00665 Integrase core domain Vag1382_37870 PF01527 Transposase Vag1382_37890 PF00672 HAMP domain Vag1382_37890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vag1382_37890 PF00512 His Kinase A (phospho-acceptor) domain Vag1382_37900 PF02954 Bacterial regulatory protein, Fis family Vag1382_37900 PF14532 Sigma-54 interaction domain Vag1382_37900 PF00072 Response regulator receiver domain Vag1382_37920 PF00465 Iron-containing alcohol dehydrogenase Vag1382_37930 PF06719 AraC-type transcriptional regulator N-terminus Vag1382_37930 PF12833 Helix-turn-helix domain Vag1382_37940 PF06483 Chitinase C Vag1382_37940 PF00704 Glycosyl hydrolases family 18 Vag1382_37950 PF00483 Nucleotidyl transferase Vag1382_37960 PF01268 Formate--tetrahydrofolate ligase Vag1382_37970 PF00294 pfkB family carbohydrate kinase Vag1382_38010 PF13419 Haloacid dehalogenase-like hydrolase Vag1382_38020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Vag1382_38040 PF04336 Acyl carrier protein phosphodiesterase Vag1382_38050 PF00270 DEAD/DEAH box helicase Vag1382_38050 PF00271 Helicase conserved C-terminal domain Vag1382_38060 PF12792 CSS motif domain associated with EAL Vag1382_38060 PF00563 EAL domain Vag1382_38090 PF01292 Prokaryotic cytochrome b561 Vag1382_38100 PF04264 YceI-like domain Vag1382_38110 PF01226 Formate/nitrite transporter Vag1382_38120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vag1382_38120 PF03466 LysR substrate binding domain Vag1382_38130 PF06496 Protein of unknown function (DUF1097) Vag1382_38140 PF11398 Protein of unknown function (DUF2813) Vag1382_38150 PF00149 Calcineurin-like phosphoesterase Vag1382_38150 PF02872 5'-nucleotidase, C-terminal domain Vag1382_38170 PF03741 Integral membrane protein TerC family Vag1382_38210 PF12262 Bacterial virulence factor lipase N-terminal Vag1382_38220 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) Vag1382_38250 PF03061 Thioesterase superfamily Vag1382_38270 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Vag1382_38270 PF12793 Sugar transport-related sRNA regulator N-term Vag1382_38320 PF01556 DnaJ C terminal domain Vag1382_38320 PF00684 DnaJ central domain Vag1382_38320 PF00226 DnaJ domain Vag1382_38340 PF00563 EAL domain Vag1382_38340 PF00498 FHA domain Vag1382_38340 PF00990 Diguanylate cyclase, GGDEF domain Vag1382_38350 PF12241 Trans-2-enoyl-CoA reductase catalytic region Vag1382_38350 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase Vag1382_38350 PF07055 Enoyl reductase FAD binding domain Vag1382_38360 PF13472 GDSL-like Lipase/Acylhydrolase family Vag1382_38370 PF00005 ABC transporter Vag1382_38400 PF02626 Carboxyltransferase domain, subdomain A and B Vag1382_38410 PF02682 Carboxyltransferase domain, subdomain C and D Vag1382_38420 PF03746 LamB/YcsF family Vag1382_38430 PF05231 MASE1 Vag1382_38430 PF13426 PAS domain Vag1382_38430 PF00563 EAL domain Vag1382_38430 PF00990 Diguanylate cyclase, GGDEF domain Vag1382_38430 PF08447 PAS fold Vag1382_38430 PF08448 PAS fold Vag1382_38440 PF16363 GDP-mannose 4,6 dehydratase Vag1382_38450 PF07715 TonB-dependent Receptor Plug Domain Vag1382_38450 PF04886 PT repeat Vag1382_38450 PF00593 TonB dependent receptor Vag1382_38460 PF03466 LysR substrate binding domain Vag1382_38460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vag1382_38470 PF13607 Succinyl-CoA ligase like flavodoxin domain Vag1382_38470 PF13380 CoA binding domain Vag1382_38470 PF00583 Acetyltransferase (GNAT) family Vag1382_38480 PF05036 Sporulation related domain Vag1382_38490 PF01820 D-ala D-ala ligase N-terminus Vag1382_38490 PF07478 D-ala D-ala ligase C-terminus Vag1382_38510 PF01253 Translation initiation factor SUI1 Vag1382_38530 PF05707 Zonular occludens toxin (Zot) Vag1382_38630 PF05707 Zonular occludens toxin (Zot) Vag1382_38750 PF03466 LysR substrate binding domain Vag1382_38750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vag1382_38770 PF00582 Universal stress protein family Vag1382_38780 PF03701 Uncharacterised protein family (UPF0181) Vag1382_38810 PF00486 Transcriptional regulatory protein, C terminal Vag1382_38810 PF00072 Response regulator receiver domain Vag1382_38830 PF02233 NAD(P) transhydrogenase beta subunit Vag1382_38840 PF01262 Alanine dehydrogenase/PNT, C-terminal domain Vag1382_38840 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch Vag1382_38840 PF05222 Alanine dehydrogenase/PNT, N-terminal domain Vag1382_38870 PF00072 Response regulator receiver domain Vag1382_38870 PF00990 Diguanylate cyclase, GGDEF domain Vag1382_38890 PF00563 EAL domain Vag1382_38890 PF00990 Diguanylate cyclase, GGDEF domain Vag1382_38890 PF00360 Phytochrome region Vag1382_38890 PF01590 GAF domain Vag1382_38910 PF00005 ABC transporter Vag1382_38910 PF03459 TOBE domain Vag1382_38920 PF00528 Binding-protein-dependent transport system inner membrane component Vag1382_38940 PF07685 CobB/CobQ-like glutamine amidotransferase domain Vag1382_38940 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Vag1382_38970 PF08443 RimK-like ATP-grasp domain Vag1382_38970 PF18030 RimK PreATP-grasp domain Vag1382_38980 PF00155 Aminotransferase class I and II Vag1382_38990 PF12833 Helix-turn-helix domain Vag1382_38990 PF12852 Cupin Vag1382_39000 PF01554 MatE Vag1382_39020 PF13597 Anaerobic ribonucleoside-triphosphate reductase Vag1382_39020 PF03477 ATP cone domain Vag1382_39040 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Vag1382_39050 PF00873 AcrB/AcrD/AcrF family Vag1382_39070 PF04143 Sulphur transport Vag1382_39100 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Vag1382_39100 PF07992 Pyridine nucleotide-disulphide oxidoreductase Vag1382_39110 PF01177 Asp/Glu/Hydantoin racemase Vag1382_39120 PF02567 Phenazine biosynthesis-like protein Vag1382_39140 PF00384 Molybdopterin oxidoreductase Vag1382_39150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vag1382_39150 PF03466 LysR substrate binding domain Vag1382_39160 PF02634 FdhD/NarQ family Vag1382_39170 PF07690 Major Facilitator Superfamily Vag1382_39180 PF00196 Bacterial regulatory proteins, luxR family Vag1382_39180 PF00072 Response regulator receiver domain Vag1382_39190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vag1382_39190 PF07730 Histidine kinase Vag1382_39190 PF05231 MASE1 Vag1382_39200 PF07690 Major Facilitator Superfamily Vag1382_39210 PF01238 Phosphomannose isomerase type I Vag1382_39250 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal Vag1382_39250 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Vag1382_39260 PF00085 Thioredoxin Vag1382_39270 PF07690 Major Facilitator Superfamily Vag1382_39280 PF11756 Nitrous oxide-stimulated promoter Vag1382_39310 PF07715 TonB-dependent Receptor Plug Domain Vag1382_39310 PF00593 TonB dependent receptor Vag1382_39330 PF03605 Anaerobic c4-dicarboxylate membrane transporter Vag1382_39360 PF14824 Sirohaem biosynthesis protein central Vag1382_39360 PF10414 Sirohaem synthase dimerisation region Vag1382_39360 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Vag1382_39370 PF01226 Formate/nitrite transporter Vag1382_39380 PF13806 Rieske-like [2Fe-2S] domain Vag1382_39390 PF18267 Rubredoxin NAD+ reductase C-terminal domain Vag1382_39390 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain Vag1382_39390 PF07992 Pyridine nucleotide-disulphide oxidoreductase Vag1382_39390 PF01077 Nitrite and sulphite reductase 4Fe-4S domain Vag1382_39390 PF04324 BFD-like [2Fe-2S] binding domain Vag1382_39400 PF01272 Transcription elongation factor, GreA/GreB, C-term Vag1382_39400 PF14760 Rnk N-terminus Vag1382_39410 PF13426 PAS domain Vag1382_39410 PF00563 EAL domain Vag1382_39410 PF00990 Diguanylate cyclase, GGDEF domain Vag1382_39490 PF00128 Alpha amylase, catalytic domain Vag1382_39490 PF09154 Domain of unknown function (DUF1939) Vag1382_39500 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Vag1382_39500 PF00672 HAMP domain Vag1382_39510 PF01168 Alanine racemase, N-terminal domain Vag1382_39510 PF00842 Alanine racemase, C-terminal domain Vag1382_39540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vag1382_39540 PF03466 LysR substrate binding domain Vag1382_39550 PF01168 Alanine racemase, N-terminal domain Vag1382_39550 PF14031 Putative serine dehydratase domain Vag1382_39560 PF02423 Ornithine cyclodeaminase/mu-crystallin family Vag1382_39580 PF09330 D-lactate dehydrogenase, membrane binding Vag1382_39580 PF01565 FAD binding domain Vag1382_39590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vag1382_39590 PF03466 LysR substrate binding domain Vag1382_39600 PF05762 VWA domain containing CoxE-like protein Vag1382_39610 PF07728 AAA domain (dynein-related subfamily) Vag1382_39610 PF12592 Protein of unknown function (DUF3763) Vag1382_39610 PF17868 AAA lid domain Vag1382_39630 PF01212 Beta-eliminating lyase Vag1382_39640 PF00034 Cytochrome c Vag1382_39650 PF03606 C4-dicarboxylate anaerobic carrier Vag1382_39670 PF08212 Lipocalin-like domain Vag1382_39690 PF13476 AAA domain Vag1382_39700 PF12320 Type 5 capsule protein repressor C-terminal domain Vag1382_39700 PF00149 Calcineurin-like phosphoesterase Vag1382_39730 PF16671 Actin cross-linking domain Vag1382_39730 PF04717 Type VI secretion system, phage-baseplate injector Vag1382_39750 PF00004 ATPase family associated with various cellular activities (AAA) Vag1382_39750 PF10431 C-terminal, D2-small domain, of ClpB protein Vag1382_39750 PF17871 AAA lid domain Vag1382_39750 PF07724 AAA domain (Cdc48 subfamily) Vag1382_39870 PF13677 Membrane MotB of proton-channel complex MotA/MotB Vag1382_39870 PF00691 OmpA family Vag1382_39910 PF00069 Protein kinase domain Vag1382_39910 PF03793 PASTA domain Vag1382_39950 PF00486 Transcriptional regulatory protein, C terminal Vag1382_39950 PF00072 Response regulator receiver domain Vag1382_39970 PF00043 Glutathione S-transferase, C-terminal domain Vag1382_39970 PF13417 Glutathione S-transferase, N-terminal domain Vag1382_39980 PF08361 MAATS-type transcriptional repressor, C-terminal region Vag1382_39980 PF00440 Bacterial regulatory proteins, tetR family Vag1382_40010 PF07992 Pyridine nucleotide-disulphide oxidoreductase Vag1382_40010 PF13806 Rieske-like [2Fe-2S] domain Vag1382_40010 PF18267 Rubredoxin NAD+ reductase C-terminal domain Vag1382_40010 PF01077 Nitrite and sulphite reductase 4Fe-4S domain Vag1382_40010 PF04324 BFD-like [2Fe-2S] binding domain Vag1382_40010 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain Vag1382_40020 PF00005 ABC transporter Vag1382_40030 PF00528 Binding-protein-dependent transport system inner membrane component Vag1382_40040 PF00005 ABC transporter Vag1382_40050 PF00072 Response regulator receiver domain Vag1382_40050 PF03861 ANTAR domain Vag1382_40060 PF01738 Dienelactone hydrolase family Vag1382_40070 PF02885 Glycosyl transferase family, helical bundle domain Vag1382_40070 PF00591 Glycosyl transferase family, a/b domain Vag1382_40080 PF14824 Sirohaem biosynthesis protein central Vag1382_40080 PF10414 Sirohaem synthase dimerisation region Vag1382_40080 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Vag1382_40090 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Vag1382_40090 PF00384 Molybdopterin oxidoreductase Vag1382_40090 PF01568 Molydopterin dinucleotide binding domain Vag1382_40110 PF03222 Tryptophan/tyrosine permease family Vag1382_40130 PF00990 Diguanylate cyclase, GGDEF domain Vag1382_40130 PF07694 5TMR of 5TMR-LYT Vag1382_40150 PF00082 Subtilase family Vag1382_40150 PF01483 Proprotein convertase P-domain Vag1382_40190 PF00486 Transcriptional regulatory protein, C terminal Vag1382_40190 PF00072 Response regulator receiver domain Vag1382_40230 PF04314 Copper chaperone PCu(A)C Vag1382_40240 PF00012 Hsp70 protein Vag1382_40270 PF00676 Dehydrogenase E1 component Vag1382_40280 PF02780 Transketolase, C-terminal domain Vag1382_40280 PF02779 Transketolase, pyrimidine binding domain Vag1382_40290 PF00364 Biotin-requiring enzyme Vag1382_40290 PF02817 e3 binding domain Vag1382_40290 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Vag1382_40300 PF01012 Electron transfer flavoprotein domain Vag1382_40300 PF00766 Electron transfer flavoprotein FAD-binding domain Vag1382_40340 PF01389 OmpA-like transmembrane domain Vag1382_40340 PF00691 OmpA family Vag1382_40370 PF00528 Binding-protein-dependent transport system inner membrane component Vag1382_40380 PF00528 Binding-protein-dependent transport system inner membrane component Vag1382_40390 PF00497 Bacterial extracellular solute-binding proteins, family 3 Vag1382_40400 PF00005 ABC transporter Vag1382_40460 PF02028 BCCT, betaine/carnitine/choline family transporter Vag1382_40480 PF00171 Aldehyde dehydrogenase family Vag1382_40510 PF08031 Berberine and berberine like Vag1382_40510 PF01565 FAD binding domain Vag1382_40520 PF07992 Pyridine nucleotide-disulphide oxidoreductase Vag1382_40520 PF00724 NADH:flavin oxidoreductase / NADH oxidase family Vag1382_40540 PF01040 UbiA prenyltransferase family Vag1382_40560 PF00510 Cytochrome c oxidase subunit III Vag1382_40570 PF00115 Cytochrome C and Quinol oxidase polypeptide I Vag1382_40580 PF00116 Cytochrome C oxidase subunit II, periplasmic domain Vag1382_40580 PF06481 COX Aromatic Rich Motif Vag1382_40600 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase Vag1382_40600 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase Vag1382_40610 PF00378 Enoyl-CoA hydratase/isomerase Vag1382_40620 PF00378 Enoyl-CoA hydratase/isomerase Vag1382_40630 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Vag1382_40630 PF02770 Acyl-CoA dehydrogenase, middle domain Vag1382_40630 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Vag1382_40640 PF00171 Aldehyde dehydrogenase family Vag1382_40650 PF02803 Thiolase, C-terminal domain Vag1382_40650 PF00108 Thiolase, N-terminal domain Vag1382_40660 PF00376 MerR family regulatory protein Vag1382_40660 PF09278 MerR, DNA binding Vag1382_40670 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Vag1382_40670 PF02770 Acyl-CoA dehydrogenase, middle domain Vag1382_40670 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Vag1382_40680 PF01039 Carboxyl transferase domain Vag1382_40690 PF00378 Enoyl-CoA hydratase/isomerase Vag1382_40700 PF00682 HMGL-like Vag1382_40710 PF10063 Uncharacterized integral membrane protein (DUF2301) Vag1382_40730 PF01565 FAD binding domain Vag1382_40730 PF13183 4Fe-4S dicluster domain Vag1382_40730 PF02913 FAD linked oxidases, C-terminal domain Vag1382_40740 PF04909 Amidohydrolase Vag1382_40750 PF00561 alpha/beta hydrolase fold Vag1382_40760 PF12833 Helix-turn-helix domain Vag1382_40760 PF01965 DJ-1/PfpI family Vag1382_40790 PF04069 Substrate binding domain of ABC-type glycine betaine transport system Vag1382_40800 PF00528 Binding-protein-dependent transport system inner membrane component Vag1382_40810 PF00571 CBS domain Vag1382_40810 PF00005 ABC transporter Vag1382_40820 PF00528 Binding-protein-dependent transport system inner membrane component Vag1382_40830 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Vag1382_40830 PF08447 PAS fold Vag1382_40830 PF13426 PAS domain Vag1382_40840 PF00871 Acetokinase family Vag1382_40850 PF00563 EAL domain Vag1382_40850 PF00990 Diguanylate cyclase, GGDEF domain Vag1382_40850 PF03707 Bacterial signalling protein N terminal repeat Vag1382_40860 PF00270 DEAD/DEAH box helicase Vag1382_40860 PF00271 Helicase conserved C-terminal domain Vag1382_40860 PF03880 DbpA RNA binding domain Vag1382_40870 PF08206 Ribonuclease B OB domain Vag1382_40870 PF00575 S1 RNA binding domain Vag1382_40870 PF00773 RNB domain Vag1382_40880 PF12833 Helix-turn-helix domain Vag1382_40900 PF12849 PBP superfamily domain Vag1382_40910 PF01575 MaoC like domain Vag1382_40920 PF08447 PAS fold Vag1382_40920 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Vag1382_40930 PF00005 ABC transporter Vag1382_40940 PF12792 CSS motif domain associated with EAL Vag1382_40940 PF00563 EAL domain Vag1382_40990 PF00270 DEAD/DEAH box helicase Vag1382_40990 PF00271 Helicase conserved C-terminal domain Vag1382_41000 PF07683 Cobalamin synthesis protein cobW C-terminal domain Vag1382_41000 PF02492 CobW/HypB/UreG, nucleotide-binding domain Vag1382_41020 PF01470 Pyroglutamyl peptidase Vag1382_41040 PF00313 'Cold-shock' DNA-binding domain Vag1382_41050 PF17876 Cold shock domain Vag1382_41050 PF00773 RNB domain Vag1382_41050 PF08461 Ribonuclease R winged-helix domain Vag1382_41050 PF08206 Ribonuclease B OB domain Vag1382_41050 PF00575 S1 RNA binding domain Vag1382_41060 PF00291 Pyridoxal-phosphate dependent enzyme Vag1382_41080 PF09905 DNA-binding protein VF530 Vag1382_41090 PF00271 Helicase conserved C-terminal domain Vag1382_41090 PF00270 DEAD/DEAH box helicase Vag1382_41110 PF01925 Sulfite exporter TauE/SafE Vag1382_41130 PF03466 LysR substrate binding domain Vag1382_41130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vag1382_41140 PF00892 EamA-like transporter family Vag1382_41150 PF01276 Orn/Lys/Arg decarboxylase, major domain Vag1382_41150 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain Vag1382_41160 PF00857 Isochorismatase family Vag1382_41180 PF04151 Bacterial pre-peptidase C-terminal domain Vag1382_41180 PF00082 Subtilase family Vag1382_41180 PF05922 Peptidase inhibitor I9 Vag1382_41210 PF12843 Putative quorum-sensing-regulated virulence factor Vag1382_41250 PF01329 Pterin 4 alpha carbinolamine dehydratase Vag1382_41260 PF00351 Biopterin-dependent aromatic amino acid hydroxylase Vag1382_41270 PF00501 AMP-binding enzyme Vag1382_41270 PF13193 AMP-binding enzyme C-terminal domain Vag1382_41290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vag1382_41290 PF03466 LysR substrate binding domain Vag1382_41310 PF00892 EamA-like transporter family Vag1382_41340 PF00465 Iron-containing alcohol dehydrogenase Vag1382_41350 PF07995 Glucose / Sorbosone dehydrogenase Vag1382_41370 PF00210 Ferritin-like domain Vag1382_41380 PF00672 HAMP domain Vag1382_41380 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Vag1382_41380 PF17200 Single Cache domain 2 Vag1382_41400 PF00005 ABC transporter Vag1382_41400 PF02687 FtsX-like permease family Vag1382_41400 PF12704 MacB-like periplasmic core domain Vag1382_41410 PF00005 ABC transporter Vag1382_41410 PF12704 MacB-like periplasmic core domain Vag1382_41410 PF02687 FtsX-like permease family Vag1382_41440 PF00990 Diguanylate cyclase, GGDEF domain Vag1382_41450 PF03889 Alternative ribosome-rescue factor A Vag1382_41460 PF00313 'Cold-shock' DNA-binding domain Vag1382_41500 PF00691 OmpA family Vag1382_41500 PF13488 Glycine zipper Vag1382_41520 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase Vag1382_41520 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Vag1382_41530 PF01040 UbiA prenyltransferase family Vag1382_41540 PF02628 Cytochrome oxidase assembly protein Vag1382_41570 PF00510 Cytochrome c oxidase subunit III Vag1382_41580 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 Vag1382_41590 PF00115 Cytochrome C and Quinol oxidase polypeptide I Vag1382_41600 PF02790 Cytochrome C oxidase subunit II, transmembrane domain Vag1382_41600 PF00116 Cytochrome C oxidase subunit II, periplasmic domain Vag1382_41610 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Vag1382_41610 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Vag1382_41610 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Vag1382_41610 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Vag1382_41630 PF01810 LysE type translocator Vag1382_41640 PF12833 Helix-turn-helix domain Vag1382_41670 PF01557 Fumarylacetoacetate (FAA) hydrolase family Vag1382_41710 PF00892 EamA-like transporter family Vag1382_41720 PF00462 Glutaredoxin Vag1382_41750 PF07690 Major Facilitator Superfamily Vag1382_41760 PF03466 LysR substrate binding domain Vag1382_41760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vag1382_41770 PF00563 EAL domain Vag1382_41770 PF00990 Diguanylate cyclase, GGDEF domain Vag1382_41770 PF08447 PAS fold Vag1382_41770 PF08448 PAS fold Vag1382_41780 PF01476 LysM domain Vag1382_41780 PF08525 Opacity-associated protein A N-terminal motif Vag1382_41780 PF01551 Peptidase family M23 Vag1382_41840 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Vag1382_41840 PF00672 HAMP domain Vag1382_41840 PF02743 Cache domain Vag1382_41860 PF03222 Tryptophan/tyrosine permease family Vag1382_41920 PF00107 Zinc-binding dehydrogenase Vag1382_41920 PF08240 Alcohol dehydrogenase GroES-like domain Vag1382_41930 PF02378 Phosphotransferase system, EIIC Vag1382_41930 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit Vag1382_41940 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 Vag1382_41970 PF01758 Sodium Bile acid symporter family Vag1382_41990 PF01161 Phosphatidylethanolamine-binding protein Vag1382_42000 PF02567 Phenazine biosynthesis-like protein Vag1382_42010 PF10282 Lactonase, 7-bladed beta-propeller Vag1382_42030 PF00005 ABC transporter Vag1382_42070 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Vag1382_42070 PF01568 Molydopterin dinucleotide binding domain Vag1382_42070 PF12838 4Fe-4S dicluster domain Vag1382_42070 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Vag1382_42070 PF00384 Molybdopterin oxidoreductase Vag1382_42110 PF00873 AcrB/AcrD/AcrF family Vag1382_42150 PF00990 Diguanylate cyclase, GGDEF domain Vag1382_42150 PF17151 Periplasmic sensor domain Vag1382_42170 PF13302 Acetyltransferase (GNAT) domain Vag1382_42190 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) Vag1382_42200 PF00873 AcrB/AcrD/AcrF family Vag1382_42210 PF13533 Biotin-lipoyl like Vag1382_42240 PF00326 Prolyl oligopeptidase family Vag1382_42240 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain Vag1382_42250 PF12848 ABC transporter Vag1382_42250 PF00005 ABC transporter Vag1382_42250 PF16326 ABC transporter C-terminal domain Vag1382_42260 PF00582 Universal stress protein family Vag1382_42270 PF02525 Flavodoxin-like fold Vag1382_42280 PF02254 TrkA-N domain Vag1382_42280 PF00999 Sodium/hydrogen exchanger family Vag1382_42310 PF00128 Alpha amylase, catalytic domain Vag1382_42320 PF13411 MerR HTH family regulatory protein Vag1382_42330 PF02627 Carboxymuconolactone decarboxylase family Vag1382_42350 PF08453 Peptidase family M9 N-terminal Vag1382_42350 PF01752 Collagenase Vag1382_42350 PF04151 Bacterial pre-peptidase C-terminal domain Vag1382_42370 PF17848 Acetyl-coA carboxylase zinc finger domain Vag1382_42370 PF01039 Carboxyl transferase domain Vag1382_42380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vag1382_42380 PF03466 LysR substrate binding domain Vag1382_42390 PF02743 Cache domain Vag1382_42390 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Vag1382_42390 PF00672 HAMP domain Vag1382_42410 PF03824 High-affinity nickel-transport protein Vag1382_42420 PF02583 Metal-sensitive transcriptional repressor Vag1382_42460 PF01584 CheW-like domain Vag1382_42460 PF00072 Response regulator receiver domain Vag1382_42480 PF01243 Pyridoxamine 5'-phosphate oxidase Vag1382_42490 PF06228 Haem utilisation ChuX/HutX Vag1382_42500 PF04055 Radical SAM superfamily Vag1382_42510 PF03544 Gram-negative bacterial TonB protein C-terminal Vag1382_42520 PF01618 MotA/TolQ/ExbB proton channel family Vag1382_42530 PF02472 Biopolymer transport protein ExbD/TolR Vag1382_42550 PF01032 FecCD transport family Vag1382_42560 PF00005 ABC transporter Vag1382_42650 PF01467 Cytidylyltransferase-like Vag1382_42660 PF02540 NAD synthase Vag1382_42670 PF03476 MOSC N-terminal beta barrel domain Vag1382_42670 PF03473 MOSC domain Vag1382_42670 PF00111 2Fe-2S iron-sulfur cluster binding domain Vag1382_42670 PF03473 MOSC domain Vag1382_42670 PF03476 MOSC N-terminal beta barrel domain Vag1382_42670 PF00111 2Fe-2S iron-sulfur cluster binding domain Vag1382_42680 PF01679 Proteolipid membrane potential modulator Vag1382_42690 PF01979 Amidohydrolase family Vag1382_42700 PF05661 Protein of unknown function (DUF808) Vag1382_42760 PF00528 Binding-protein-dependent transport system inner membrane component Vag1382_42770 PF00528 Binding-protein-dependent transport system inner membrane component Vag1382_42770 PF14785 Maltose transport system permease protein MalF P2 domain Vag1382_42780 PF01547 Bacterial extracellular solute-binding protein Vag1382_42790 PF08402 TOBE domain Vag1382_42790 PF00005 ABC transporter Vag1382_42800 PF02397 Bacterial sugar transferase Vag1382_42830 PF02706 Chain length determinant protein Vag1382_42830 PF13807 G-rich domain on putative tyrosine kinase Vag1382_42830 PF13614 AAA domain Vag1382_42850 PF13439 Glycosyltransferase Family 4 Vag1382_42850 PF00534 Glycosyl transferases group 1 Vag1382_42920 PF00440 Bacterial regulatory proteins, tetR family Vag1382_42920 PF16925 Tetracyclin repressor-like, C-terminal domain Vag1382_42930 PF00107 Zinc-binding dehydrogenase Vag1382_42930 PF16884 N-terminal domain of oxidoreductase Vag1382_42940 PF13417 Glutathione S-transferase, N-terminal domain Vag1382_42950 PF00199 Catalase Vag1382_42950 PF06628 Catalase-related immune-responsive Vag1382_42960 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase Vag1382_42960 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase Vag1382_42980 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit Vag1382_43000 PF12833 Helix-turn-helix domain Vag1382_43010 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 Vag1382_43010 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit Vag1382_43020 PF01238 Phosphomannose isomerase type I Vag1382_43040 PF13419 Haloacid dehalogenase-like hydrolase Vag1382_43050 PF00127 Copper binding proteins, plastocyanin/azurin family Vag1382_43060 PF02378 Phosphotransferase system, EIIC Vag1382_43080 PF01266 FAD dependent oxidoreductase Vag1382_43090 PF07992 Pyridine nucleotide-disulphide oxidoreductase Vag1382_43090 PF18113 Rubredoxin binding C-terminal domain Vag1382_43100 PF00171 Aldehyde dehydrogenase family Vag1382_43110 PF00355 Rieske [2Fe-2S] domain Vag1382_43110 PF00848 Ring hydroxylating alpha subunit (catalytic domain) Vag1382_43120 PF02028 BCCT, betaine/carnitine/choline family transporter Vag1382_43130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vag1382_43130 PF03466 LysR substrate binding domain Vag1382_43140 PF02386 Cation transport protein Vag1382_43150 PF02254 TrkA-N domain Vag1382_43150 PF02080 TrkA-C domain Vag1382_43160 PF00072 Response regulator receiver domain Vag1382_43160 PF00486 Transcriptional regulatory protein, C terminal Vag1382_43170 PF13493 Domain of unknown function (DUF4118) Vag1382_43170 PF13493 Domain of unknown function (DUF4118) Vag1382_43170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vag1382_43170 PF00512 His Kinase A (phospho-acceptor) domain Vag1382_43170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vag1382_43170 PF02702 Osmosensitive K+ channel His kinase sensor domain Vag1382_43170 PF02702 Osmosensitive K+ channel His kinase sensor domain Vag1382_43170 PF00512 His Kinase A (phospho-acceptor) domain Vag1382_43180 PF00005 ABC transporter Vag1382_43180 PF00664 ABC transporter transmembrane region Vag1382_43190 PF00593 TonB dependent receptor Vag1382_43190 PF07715 TonB-dependent Receptor Plug Domain Vag1382_43200 PF00005 ABC transporter Vag1382_43210 PF01497 Periplasmic binding protein Vag1382_43220 PF01032 FecCD transport family Vag1382_43240 PF00529 HlyD membrane-fusion protein of T1SS Vag1382_43250 PF00005 ABC transporter Vag1382_43250 PF00664 ABC transporter transmembrane region Vag1382_43270 PF00196 Bacterial regulatory proteins, luxR family Vag1382_43280 PF00196 Bacterial regulatory proteins, luxR family Vag1382_43300 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Vag1382_43300 PF02743 Cache domain Vag1382_43300 PF00672 HAMP domain Vag1382_43310 PF17863 AAA lid domain Vag1382_43310 PF07726 ATPase family associated with various cellular activities (AAA) Vag1382_43320 PF01882 Protein of unknown function DUF58 Vag1382_43340 PF13519 von Willebrand factor type A domain Vag1382_43350 PF13519 von Willebrand factor type A domain Vag1382_43380 PF00005 ABC transporter Vag1382_43390 PF00528 Binding-protein-dependent transport system inner membrane component Vag1382_43400 PF00528 Binding-protein-dependent transport system inner membrane component Vag1382_43410 PF12849 PBP superfamily domain Vag1382_43420 PF00672 HAMP domain Vag1382_43420 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Vag1382_43420 PF12729 Four helix bundle sensory module for signal transduction Vag1382_43460 PF07715 TonB-dependent Receptor Plug Domain Vag1382_43460 PF00593 TonB dependent receptor Vag1382_43470 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain Vag1382_43470 PF00326 Prolyl oligopeptidase family Vag1382_43480 PF00271 Helicase conserved C-terminal domain Vag1382_43480 PF00270 DEAD/DEAH box helicase Vag1382_43500 PF03734 L,D-transpeptidase catalytic domain Vag1382_43500 PF17969 L,D-transpeptidase C-terminal domain Vag1382_43500 PF01476 LysM domain Vag1382_43510 PF03441 FAD binding domain of DNA photolyase Vag1382_43510 PF00875 DNA photolyase Vag1382_43520 PF13411 MerR HTH family regulatory protein Vag1382_43530 PF08349 Protein of unknown function (DUF1722) Vag1382_43540 PF01048 Phosphorylase superfamily Vag1382_43570 PF00990 Diguanylate cyclase, GGDEF domain Vag1382_43580 PF11742 Protein of unknown function (DUF3302) Vag1382_43590 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Vag1382_43590 PF00529 HlyD membrane-fusion protein of T1SS Vag1382_43600 PF07155 ECF-type riboflavin transporter, S component Vag1382_43610 PF00005 ABC transporter Vag1382_43610 PF12558 ATP-binding cassette cobalt transporter Vag1382_43650 PF12801 4Fe-4S binding domain Vag1382_43650 PF13237 4Fe-4S dicluster domain Vag1382_43660 PF12800 4Fe-4S binding domain Vag1382_43660 PF12838 4Fe-4S dicluster domain Vag1382_43670 PF00583 Acetyltransferase (GNAT) family Vag1382_43700 PF07238 PilZ domain Vag1382_43700 PF12945 Flagellar protein YcgR Vag1382_43710 PF13609 Gram-negative porin Vag1382_43720 PF17200 Single Cache domain 2 Vag1382_43720 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Vag1382_43720 PF00672 HAMP domain Vag1382_43730 PF13654 AAA domain Vag1382_43730 PF05362 Lon protease (S16) C-terminal proteolytic domain Vag1382_43750 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Vag1382_43750 PF00005 ABC transporter Vag1382_43760 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain Vag1382_43760 PF00326 Prolyl oligopeptidase family Vag1382_43770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vag1382_43770 PF03466 LysR substrate binding domain Vag1382_43780 PF02652 L-lactate permease Vag1382_43790 PF01070 FMN-dependent dehydrogenase Vag1382_43810 PF00924 Mechanosensitive ion channel Vag1382_43820 PF00194 Eukaryotic-type carbonic anhydrase Vag1382_43830 PF08240 Alcohol dehydrogenase GroES-like domain Vag1382_43830 PF00107 Zinc-binding dehydrogenase Vag1382_43840 PF00155 Aminotransferase class I and II Vag1382_43850 PF03707 Bacterial signalling protein N terminal repeat Vag1382_43850 PF00990 Diguanylate cyclase, GGDEF domain Vag1382_43850 PF00563 EAL domain Vag1382_43850 PF13188 PAS domain Vag1382_43860 PF00497 Bacterial extracellular solute-binding proteins, family 3 Vag1382_43880 PF00080 Copper/zinc superoxide dismutase (SODC) Vag1382_43890 PF00512 His Kinase A (phospho-acceptor) domain Vag1382_43890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vag1382_43900 PF00486 Transcriptional regulatory protein, C terminal Vag1382_43900 PF00072 Response regulator receiver domain Vag1382_43940 PF03466 LysR substrate binding domain Vag1382_43940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vag1382_43950 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Vag1382_44010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vag1382_44010 PF03466 LysR substrate binding domain Vag1382_44040 PF18269 T3SS EscN ATPase C-terminal domain Vag1382_44040 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Vag1382_44060 PF14841 FliG middle domain Vag1382_44060 PF14842 FliG N-terminal domain Vag1382_44060 PF01706 FliG C-terminal domain Vag1382_44070 PF08345 Flagellar M-ring protein C-terminal Vag1382_44070 PF01514 Secretory protein of YscJ/FliF family Vag1382_44080 PF02049 Flagellar hook-basal body complex protein FliE Vag1382_44090 PF00158 Sigma-54 interaction domain Vag1382_44090 PF02954 Bacterial regulatory protein, Fis family Vag1382_44090 PF00072 Response regulator receiver domain Vag1382_44120 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term Vag1382_44130 PF00813 FliP family Vag1382_44140 PF01313 Bacterial export proteins, family 3 Vag1382_44150 PF01311 Bacterial export proteins, family 1 Vag1382_44160 PF01312 FlhB HrpN YscU SpaS Family Vag1382_44170 PF00771 FHIPEP family Vag1382_44190 PF00669 Bacterial flagellin N-terminal helical region Vag1382_44190 PF00700 Bacterial flagellin C-terminal helical region Vag1382_44230 PF07195 Flagellar hook-associated protein 2 C-terminus Vag1382_44230 PF07196 Flagellin hook IN motif Vag1382_44230 PF02465 Flagellar hook-associated protein 2 N-terminus Vag1382_44240 PF02561 Flagellar protein FliS Vag1382_44270 PF03748 Flagellar basal body-associated protein FliL Vag1382_44280 PF04545 Sigma-70, region 4 Vag1382_44280 PF04542 Sigma-70 region 2 Vag1382_44290 PF01618 MotA/TolQ/ExbB proton channel family Vag1382_44300 PF00691 OmpA family Vag1382_44300 PF13677 Membrane MotB of proton-channel complex MotA/MotB Vag1382_44330 PF08000 Bacterial PH domain Vag1382_44400 PF02901 Pyruvate formate lyase-like Vag1382_44400 PF01228 Glycine radical Vag1382_44410 PF04055 Radical SAM superfamily Vag1382_44420 PF00923 Transaldolase/Fructose-6-phosphate aldolase Vag1382_44440 PF00583 Acetyltransferase (GNAT) family Vag1382_44460 PF07690 Major Facilitator Superfamily Vag1382_44470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vag1382_44470 PF03466 LysR substrate binding domain Vag1382_44480 PF00892 EamA-like transporter family Vag1382_44520 PF13533 Biotin-lipoyl like Vag1382_44540 PF01594 AI-2E family transporter Vag1382_44550 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) Vag1382_44560 PF00970 Oxidoreductase FAD-binding domain Vag1382_44560 PF00175 Oxidoreductase NAD-binding domain Vag1382_44580 PF09905 DNA-binding protein VF530 Vag1382_44590 PF03466 LysR substrate binding domain Vag1382_44590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vag1382_44610 PF00881 Nitroreductase family Vag1382_44620 PF12833 Helix-turn-helix domain Vag1382_44620 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term Vag1382_44630 PF00686 Starch binding domain Vag1382_44630 PF00128 Alpha amylase, catalytic domain Vag1382_44640 PF07943 Penicillin-binding protein 5, C-terminal domain Vag1382_44640 PF00768 D-alanyl-D-alanine carboxypeptidase Vag1382_44650 PF00561 alpha/beta hydrolase fold Vag1382_44690 PF03441 FAD binding domain of DNA photolyase Vag1382_44690 PF00875 DNA photolyase Vag1382_44700 PF02469 Fasciclin domain Vag1382_44710 PF18416 N-acetylglucosamine binding protein domain 2 Vag1382_44710 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading Vag1382_44720 PF01734 Patatin-like phospholipase Vag1382_44730 PF01914 MarC family integral membrane protein Vag1382_44740 PF00881 Nitroreductase family Vag1382_44760 PF10531 SLBB domain Vag1382_44760 PF18412 Outer-membrane lipoprotein Wza C-terminal domain Vag1382_44760 PF02563 Polysaccharide biosynthesis/export protein Vag1382_44770 PF01451 Low molecular weight phosphotyrosine protein phosphatase Vag1382_44780 PF13614 AAA domain Vag1382_44780 PF02706 Chain length determinant protein Vag1382_44780 PF13807 G-rich domain on putative tyrosine kinase Vag1382_44800 PF00375 Sodium:dicarboxylate symporter family Vag1382_44810 PF06803 Protein of unknown function (DUF1232) Vag1382_44820 PF07687 Peptidase dimerisation domain Vag1382_44820 PF01546 Peptidase family M20/M25/M40 Vag1382_44830 PF07670 Nucleoside recognition Vag1382_44840 PF07670 Nucleoside recognition Vag1382_44860 PF00128 Alpha amylase, catalytic domain Vag1382_44870 PF00912 Transglycosylase Vag1382_44880 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) Vag1382_44880 PF02806 Alpha amylase, C-terminal all-beta domain Vag1382_44880 PF00128 Alpha amylase, catalytic domain Vag1382_44890 PF02446 4-alpha-glucanotransferase Vag1382_44900 PF00343 Carbohydrate phosphorylase Vag1382_44910 PF17874 MalT-like TPR region Vag1382_44910 PF00196 Bacterial regulatory proteins, luxR family Vag1382_44940 PF02630 SCO1/SenC Vag1382_44950 PF00367 phosphotransferase system, EIIB Vag1382_44950 PF02378 Phosphotransferase system, EIIC Vag1382_44960 PF03193 RsgA GTPase Vag1382_44970 PF00375 Sodium:dicarboxylate symporter family Vag1382_44980 PF08543 Phosphomethylpyrimidine kinase Vag1382_45000 PF13520 Amino acid permease Vag1382_45010 PF01276 Orn/Lys/Arg decarboxylase, major domain Vag1382_45010 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain Vag1382_45010 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain Vag1382_45040 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) Vag1382_45040 PF11852 Domain of unknown function (DUF3372) Vag1382_45040 PF03714 Bacterial pullanase-associated domain Vag1382_45040 PF18494 Pullulanase Ins domain Vag1382_45040 PF17967 Pullulanase N2 domain Vag1382_45050 PF04231 Endonuclease I Vag1382_45060 PF00128 Alpha amylase, catalytic domain Vag1382_45060 PF02903 Alpha amylase, N-terminal ig-like domain Vag1382_45060 PF16657 Maltogenic Amylase, C-terminal domain Vag1382_45090 PF02264 LamB porin Vag1382_45100 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) Vag1382_45100 PF00128 Alpha amylase, catalytic domain Vag1382_45120 PF07690 Major Facilitator Superfamily Vag1382_45170 PF01551 Peptidase family M23 Vag1382_45170 PF04225 Opacity-associated protein A LysM-like domain Vag1382_45180 PF05193 Peptidase M16 inactive domain Vag1382_45180 PF00675 Insulinase (Peptidase family M16) Vag1382_45190 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Vag1382_45190 PF17200 Single Cache domain 2 Vag1382_45190 PF00672 HAMP domain Vag1382_45200 PF00005 ABC transporter Vag1382_45210 PF01032 FecCD transport family Vag1382_45220 PF01032 FecCD transport family Vag1382_45230 PF01497 Periplasmic binding protein Vag1382_45240 PF07715 TonB-dependent Receptor Plug Domain Vag1382_45240 PF07660 Secretin and TonB N terminus short domain Vag1382_45240 PF00593 TonB dependent receptor Vag1382_45250 PF07715 TonB-dependent Receptor Plug Domain Vag1382_45250 PF00593 TonB dependent receptor Vag1382_45260 PF02655 ATP-grasp domain Vag1382_45260 PF00206 Lyase Vag1382_45270 PF04183 IucA / IucC family Vag1382_45270 PF06276 Ferric iron reductase FhuF-like transporter Vag1382_45290 PF04183 IucA / IucC family Vag1382_45290 PF06276 Ferric iron reductase FhuF-like transporter Vag1382_45300 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Vag1382_45300 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain Vag1382_45310 PF01547 Bacterial extracellular solute-binding protein Vag1382_45320 PF08521 Two-component sensor kinase N-terminal Vag1382_45320 PF00512 His Kinase A (phospho-acceptor) domain Vag1382_45320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vag1382_45330 PF00486 Transcriptional regulatory protein, C terminal Vag1382_45330 PF00072 Response regulator receiver domain Vag1382_45340 PF02378 Phosphotransferase system, EIIC Vag1382_45340 PF00367 phosphotransferase system, EIIB Vag1382_45380 PF08241 Methyltransferase domain Vag1382_45400 PF00535 Glycosyl transferase family 2 Vag1382_45430 PF00005 ABC transporter Vag1382_45470 PF02566 OsmC-like protein Vag1382_45480 PF01047 MarR family Vag1382_45490 PF10417 C-terminal domain of 1-Cys peroxiredoxin Vag1382_45490 PF00578 AhpC/TSA family Vag1382_45500 PF13192 Thioredoxin domain Vag1382_45500 PF07992 Pyridine nucleotide-disulphide oxidoreductase Vag1382_45530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vag1382_45530 PF03466 LysR substrate binding domain Vag1382_45540 PF01965 DJ-1/PfpI family Vag1382_45540 PF12833 Helix-turn-helix domain Vag1382_45550 PF08281 Sigma-70, region 4 Vag1382_45550 PF04542 Sigma-70 region 2 Vag1382_45590 PF03475 3-alpha domain Vag1382_45590 PF03473 MOSC domain Vag1382_45640 PF12833 Helix-turn-helix domain Vag1382_45640 PF06719 AraC-type transcriptional regulator N-terminus Vag1382_45660 PF00664 ABC transporter transmembrane region Vag1382_45660 PF00005 ABC transporter Vag1382_45680 PF01037 Lrp/AsnC ligand binding domain Vag1382_45710 PF13302 Acetyltransferase (GNAT) domain Vag1382_45740 PF00474 Sodium:solute symporter family Vag1382_45750 PF00474 Sodium:solute symporter family Vag1382_45770 PF18327 Proline utilization A proline dehydrogenase N-terminal domain Vag1382_45770 PF14850 DNA-binding domain of Proline dehydrogenase Vag1382_45770 PF01619 Proline dehydrogenase Vag1382_45770 PF00171 Aldehyde dehydrogenase family Vag1382_45780 PF12833 Helix-turn-helix domain Vag1382_45800 PF01243 Pyridoxamine 5'-phosphate oxidase Vag1382_45800 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region Vag1382_45810 PF02743 Cache domain Vag1382_45810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vag1382_45810 PF00512 His Kinase A (phospho-acceptor) domain Vag1382_45820 PF00072 Response regulator receiver domain Vag1382_45820 PF02954 Bacterial regulatory protein, Fis family Vag1382_45820 PF00158 Sigma-54 interaction domain Vag1382_45830 PF00529 HlyD membrane-fusion protein of T1SS Vag1382_45860 PF03412 Peptidase C39 family Vag1382_45860 PF00664 ABC transporter transmembrane region Vag1382_45860 PF00005 ABC transporter Vag1382_45890 PF03358 NADPH-dependent FMN reductase Vag1382_45900 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Vag1382_45910 PF00246 Zinc carboxypeptidase Vag1382_45920 PF01418 Helix-turn-helix domain, rpiR family Vag1382_45920 PF01380 SIS domain Vag1382_45930 PF01380 SIS domain Vag1382_45940 PF00367 phosphotransferase system, EIIB Vag1382_45940 PF02378 Phosphotransferase system, EIIC Vag1382_45950 PF00267 Gram-negative porin Vag1382_45970 PF00132 Bacterial transferase hexapeptide (six repeats) Vag1382_45990 PF13718 GNAT acetyltransferase 2 Vag1382_45990 PF05127 Helicase Vag1382_46000 PF02195 ParB-like nuclease domain Vag1382_46000 PF08775 ParB family Vag1382_46010 PF18607 ParA helix turn helix domain Vag1382_46010 PF13614 AAA domain