AL539_00005 IPR010263 Protein of unknown function DUF876 AL539_00010 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal AL539_00010 IPR017732 Type IV / VI secretion system, DotU AL539_00010 IPR017733 Type VI secretion system, OmpA/MotB domain AL539_00010 IPR036737 AL539_00010 AL539_00010 IPR038522 AL539_00010 AL539_00015 IPR009612 ImcF-related AL539_00015 IPR010623 Domain of unknown function DUF1215 AL539_00015 IPR017731 Type VI secretion system, IcmF AL539_00015 IPR025743 ImcF-related, N-terminal domain AL539_00015 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_00020 IPR017748 Type VI secretion system-associated, BMAA0400 AL539_00020 IPR038225 AL539_00020 AL539_00025 IPR001932 Protein phosphatase 2C (PP2C)-like domain AL539_00025 IPR036457 AL539_00025 AL539_00030 IPR010657 ImpA, N-terminal AL539_00030 IPR017740 Type VI secretion system-associated, ImpA AL539_00035 IPR008312 Uncharacterised conserved protein UCP028301 AL539_00040 IPR010269 Protein of unknown function DUF877 AL539_00045 IPR010269 Protein of unknown function DUF877 AL539_00050 IPR009211 Predicted virulence protein, SciE type AL539_00050 IPR011990 Tetratricopeptide-like helical domain AL539_00055 IPR007048 GpW/Gp25/anti-adapter protein IraD AL539_00055 IPR017737 Type VI secretion system, lysozyme-related protein AL539_00060 IPR010272 Type VI secretion system, VCA0110 AL539_00065 IPR010732 Protein of unknown function DUF1305 AL539_00070 IPR001270 ClpA/B family AL539_00070 IPR003593 AAA+ ATPase domain AL539_00070 IPR003959 ATPase, AAA-type, core AL539_00070 IPR017729 Type VI secretion system, ATPase ClpV1 AL539_00070 IPR018368 ClpA/B, conserved site 1 AL539_00070 IPR019489 Clp ATPase, C-terminal AL539_00070 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_00070 IPR036628 AL539_00070 AL539_00075 IPR008514 Type VI secretion system effector, Hcp AL539_00075 IPR036624 AL539_00075 AL539_00080 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein AL539_00080 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset AL539_00080 IPR037026 AL539_00080 AL539_00085 IPR008727 PAAR motif AL539_00095 IPR004593 Nuclease SbcCD subunit D AL539_00095 IPR004843 Calcineurin-like phosphoesterase domain, apaH type AL539_00095 IPR026843 Nuclease SbcCD subunit D, C-terminal domain AL539_00095 IPR029052 Metallo-dependent phosphatase-like AL539_00100 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_00100 IPR038729 AL539_00100 AL539_00105 IPR000010 Proteinase inhibitor I25, cystatin AL539_00110 IPR000566 Lipocalin/cytosolic fatty-acid binding domain AL539_00110 IPR002446 Lipocalin, bacterial AL539_00110 IPR012674 Calycin AL539_00110 IPR022271 Lipocalin, ApoD type AL539_00115 IPR007036 Succinylglutamate desuccinylase/aspartoacylase AL539_00120 IPR018385 C4-dicarboxylate anaerobic carrier-like AL539_00125 IPR009056 Cytochrome c-like domain AL539_00125 IPR036909 AL539_00125 AL539_00130 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase AL539_00130 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 AL539_00130 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 AL539_00130 IPR015424 Pyridoxal phosphate-dependent transferase AL539_00130 IPR023603 Threonine aldolase AL539_00135 IPR000086 NUDIX hydrolase domain AL539_00135 IPR015797 NUDIX hydrolase domain-like AL539_00135 IPR020084 NUDIX hydrolase, conserved site AL539_00140 IPR003593 AAA+ ATPase domain AL539_00140 IPR011704 ATPase, dynein-related, AAA domain AL539_00140 IPR022547 ATPase, RavA, C-terminal AL539_00140 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_00145 IPR008912 Uncharacterised protein family CoxE-like AL539_00145 IPR036465 AL539_00145 AL539_00160 IPR000847 Transcription regulator HTH, LysR AL539_00160 IPR005119 LysR, substrate-binding AL539_00160 IPR036388 AL539_00160 AL539_00160 IPR036390 AL539_00160 AL539_00165 IPR006094 FAD linked oxidase, N-terminal AL539_00165 IPR012256 D-lactate dehydrogenase AL539_00165 IPR015409 D-lactate dehydrogenase, membrane binding, C-terminal AL539_00165 IPR016164 FAD-linked oxidase-like, C-terminal AL539_00165 IPR016167 FAD-binding, type 2, subdomain 1 AL539_00165 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 AL539_00165 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 AL539_00165 IPR016173 D-lactate dehydrogenase, C-terminal subdomain 2 AL539_00165 IPR036318 AL539_00165 AL539_00170 IPR008407 Branched-chain amino acid transport, AzlD AL539_00175 IPR011606 Branched-chain amino acid transport, permease AL539_00180 IPR000821 Alanine racemase AL539_00180 IPR001608 Alanine racemase, N-terminal AL539_00180 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal AL539_00180 IPR011079 Alanine racemase, C-terminal AL539_00180 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site AL539_00180 IPR029066 PLP-binding barrel AL539_00185 IPR003660 HAMP linker domain AL539_00185 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AL539_00185 IPR024478 4HB MCP domain AL539_00200 IPR006047 Glycosyl hydrolase, family 13, catalytic domain AL539_00200 IPR013776 Alpha-amylase, thermostable AL539_00200 IPR013780 Glycosyl hydrolase, family 13, all-beta AL539_00200 IPR017853 Glycoside hydrolase, superfamily AL539_00210 IPR002921 Fungal lipase-like domain AL539_00210 IPR029058 Alpha/Beta hydrolase fold AL539_00215 IPR007899 CHAD AL539_00215 IPR038186 AL539_00215 AL539_00235 IPR011251 Luciferase-like domain AL539_00235 IPR019949 Luciferase family oxidoreductase, group 1 AL539_00235 IPR036661 AL539_00235 AL539_00240 IPR000160 GGDEF domain AL539_00240 IPR029787 Nucleotide cyclase AL539_00245 IPR015168 SsuA/THI5-like AL539_00250 IPR000014 PAS domain AL539_00250 IPR000160 GGDEF domain AL539_00250 IPR001610 PAC motif AL539_00250 IPR013655 PAS fold-3 AL539_00250 IPR029787 Nucleotide cyclase AL539_00250 IPR035965 AL539_00250 AL539_00260 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal AL539_00260 IPR023459 Transcription elongation factor GreA/GreB family AL539_00260 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain AL539_00260 IPR036953 AL539_00260 AL539_00265 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain AL539_00265 IPR006066 Nitrite/sulphite reductase iron-sulphur/siroheam-binding site AL539_00265 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain AL539_00265 IPR007419 BFD-like [2Fe-2S]-binding domain AL539_00265 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB AL539_00265 IPR017121 Nitrite reductase [NAD(P)H], large subunit AL539_00265 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain AL539_00265 IPR036136 AL539_00265 AL539_00265 IPR036188 AL539_00265 AL539_00270 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD AL539_00270 IPR036922 AL539_00270 AL539_00275 IPR000292 Formate/nitrite transporter AL539_00275 IPR023271 Aquaporin-like AL539_00280 IPR000878 Tetrapyrrole methylase AL539_00280 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site AL539_00280 IPR006366 Uroporphyrin-III C-methyltransferase AL539_00280 IPR014776 Tetrapyrrole methylase, subdomain 2 AL539_00280 IPR014777 Tetrapyrrole methylase, subdomain 1 AL539_00280 IPR035996 AL539_00280 AL539_00285 IPR025232 Domain of unknown function DUF4174 AL539_00290 IPR021139 NYN domain, limkain-b1-type AL539_00295 IPR004668 Anaerobic c4-dicarboxylate membrane transporter AL539_00305 IPR023998 Siderophore ferric iron reductase, AHA1954 family AL539_00305 IPR024726 Ferric iron reductase, C-terminal AL539_00310 IPR000531 TonB-dependent receptor, beta-barrel AL539_00310 IPR010105 TonB-dependent siderophore receptor AL539_00310 IPR012910 TonB-dependent receptor, plug AL539_00310 IPR036942 AL539_00310 AL539_00310 IPR037066 AL539_00310 AL539_00315 IPR021677 Protein of unknown function DUF2986 AL539_00320 IPR000182 GNAT domain AL539_00320 IPR016181 Acyl-CoA N-acyltransferase AL539_00325 IPR020483 Uncharacterised protein family YgbA AL539_00330 IPR011701 Major facilitator superfamily AL539_00330 IPR036259 AL539_00330 AL539_00335 IPR005746 Thioredoxin AL539_00335 IPR013766 Thioredoxin domain AL539_00335 IPR036249 AL539_00335 AL539_00340 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 AL539_00340 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal AL539_00340 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AL539_00340 IPR016039 Thiolase-like AL539_00345 IPR010869 Protein of unknown function DUF1501 AL539_00350 IPR014917 Protein of unknown function DUF1800 AL539_00355 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II AL539_00355 IPR009023 Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain AL539_00355 IPR009029 Hydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding domain AL539_00355 IPR023074 Hydroxymethylglutaryl-CoA reductase, class I/II, catalytic domain AL539_00355 IPR023076 Hydroxymethylglutaryl-CoA reductase, class I/II, conserved site AL539_00360 IPR001250 Mannose-6-phosphate isomerase, type I AL539_00360 IPR011051 RmlC-like cupin domain AL539_00360 IPR014710 RmlC-like jelly roll fold AL539_00360 IPR016305 Mannose-6-phosphate isomerase AL539_00360 IPR018050 Phosphomannose isomerase, type I, conserved site AL539_00365 IPR000849 Sugar phosphate transporter AL539_00365 IPR011701 Major facilitator superfamily AL539_00365 IPR021159 Glycerate/sugar phosphate transporter, conserved site AL539_00365 IPR036259 AL539_00365 AL539_00370 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_00370 IPR007895 MASE1 AL539_00370 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain AL539_00370 IPR036890 AL539_00370 AL539_00375 IPR000792 Transcription regulator LuxR, C-terminal AL539_00375 IPR001789 Signal transduction response regulator, receiver domain AL539_00375 IPR011006 CheY-like superfamily AL539_00375 IPR016032 Signal transduction response regulator, C-terminal effector AL539_00380 IPR000849 Sugar phosphate transporter AL539_00380 IPR011701 Major facilitator superfamily AL539_00380 IPR021159 Glycerate/sugar phosphate transporter, conserved site AL539_00380 IPR036259 AL539_00380 AL539_00385 IPR003786 Protein FdhD AL539_00385 IPR016193 Cytidine deaminase-like AL539_00390 IPR000847 Transcription regulator HTH, LysR AL539_00390 IPR005119 LysR, substrate-binding AL539_00390 IPR036388 AL539_00390 AL539_00390 IPR036390 AL539_00390 AL539_00400 IPR006656 Molybdopterin oxidoreductase AL539_00400 IPR006657 Molydopterin dinucleotide-binding domain AL539_00400 IPR009010 Aspartate decarboxylase-like domain AL539_00400 IPR010046 Oxidoreductase alpha (molybdopterin) subunit AL539_00405 IPR019545 DM13 domain AL539_00410 IPR007339 Protein of unknown function DUF417 AL539_00410 IPR016865 Uncharacterised conserved protein UCP028065, membrane AL539_00415 IPR003719 Phenazine biosynthesis PhzF protein AL539_00420 IPR001920 Asp/Glu racemase AL539_00420 IPR004380 Aspartate racemase AL539_00420 IPR015942 Asp/Glu/hydantoin racemase AL539_00420 IPR018187 Asp/Glu racemase, active site AL539_00425 IPR001763 Rhodanese-like domain AL539_00425 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AL539_00425 IPR016156 FAD/NAD-linked reductase, dimerisation domain AL539_00425 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain AL539_00425 IPR036188 AL539_00425 AL539_00425 IPR036873 AL539_00425 AL539_00430 IPR001845 HTH ArsR-type DNA-binding domain AL539_00430 IPR036388 AL539_00430 AL539_00430 IPR036390 AL539_00430 AL539_00435 IPR007272 Sulphur transport domain AL539_00445 IPR005135 Endonuclease/exonuclease/phosphatase AL539_00445 IPR036691 AL539_00445 AL539_00455 IPR005144 ATP-cone AL539_00455 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic AL539_00455 IPR019777 Formate C-acetyltransferase glycine radical, conserved site AL539_00460 IPR001989 Radical-activating enzyme, conserved site AL539_00460 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic AL539_00460 IPR013785 Aldolase-type TIM barrel AL539_00465 IPR002528 Multi antimicrobial extrusion protein AL539_00470 IPR003313 AraC-type arabinose-binding/dimerisation domain AL539_00470 IPR009057 Homeodomain-like AL539_00470 IPR018060 DNA binding HTH domain, AraC-type AL539_00470 IPR037923 AL539_00470 AL539_00475 IPR000796 Aspartate/other aminotransferase AL539_00475 IPR004839 Aminotransferase, class I/classII AL539_00475 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 AL539_00475 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 AL539_00475 IPR015424 Pyridoxal phosphate-dependent transferase AL539_00480 IPR021109 Aspartic peptidase domain AL539_00490 IPR005220 Viral OB-fold, YgiW AL539_00490 IPR036700 AL539_00490 AL539_00495 IPR004459 Cobyric acid synthase CobQ AL539_00495 IPR011698 CobB/CobQ-like glutamine amidotransferase AL539_00495 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_00495 IPR029062 Class I glutamine amidotransferase-like AL539_00500 IPR005950 Molybdenum ABC transporter, periplasmic binding protein AL539_00505 IPR000515 MetI-like domain AL539_00505 IPR011867 Molybdate ABC transporter, permease protein AL539_00505 IPR035906 AL539_00505 AL539_00510 IPR003439 ABC transporter-like AL539_00510 IPR003593 AAA+ ATPase domain AL539_00510 IPR005116 Transport-associated OB, type 1 AL539_00510 IPR008995 Molybdate/tungstate binding, C-terminal AL539_00510 IPR011868 Molybdate ABC transporter, ATP-binding protein AL539_00510 IPR017871 ABC transporter, conserved site AL539_00510 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_00515 IPR021422 Protein of unknown function DUF3069 AL539_00515 IPR023132 Sama2622-like domain AL539_00520 IPR000160 GGDEF domain AL539_00520 IPR001789 Signal transduction response regulator, receiver domain AL539_00520 IPR011006 CheY-like superfamily AL539_00520 IPR029787 Nucleotide cyclase AL539_00525 IPR000160 GGDEF domain AL539_00525 IPR029787 Nucleotide cyclase AL539_00530 IPR019657 Late competence development protein ComFB AL539_00535 IPR022687 Iron dependent repressor, N-terminal AL539_00535 IPR036388 AL539_00535 AL539_00535 IPR036390 AL539_00535 AL539_00540 IPR009057 Homeodomain-like AL539_00540 IPR038717 AL539_00540 AL539_00550 IPR018772 Transcription activator HlyU AL539_00555 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain AL539_00555 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal AL539_00555 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 AL539_00555 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal AL539_00555 IPR026255 NAD(P) transhydrogenase, alpha subunit AL539_00555 IPR036291 AL539_00555 AL539_00560 IPR012136 NADP transhydrogenase, beta subunit AL539_00560 IPR029035 DHS-like NAD/FAD-binding domain AL539_00560 IPR034300 AL539_00560 AL539_00565 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_00565 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain AL539_00565 IPR021821 Protein of unknown function DUF3404 AL539_00565 IPR036097 AL539_00565 AL539_00565 IPR036890 AL539_00565 AL539_00570 IPR001789 Signal transduction response regulator, receiver domain AL539_00570 IPR001867 Signal transduction response regulator, C-terminal AL539_00570 IPR011006 CheY-like superfamily AL539_00570 IPR016032 Signal transduction response regulator, C-terminal effector AL539_00570 IPR036388 AL539_00570 AL539_00575 IPR021290 Protein of unknown function DUF2861 AL539_00580 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel AL539_00580 IPR032811 AL539_00580 AL539_00585 IPR005371 Uncharacterised protein family UPF0181 AL539_00590 IPR006015 Universal stress protein A AL539_00590 IPR006016 UspA AL539_00590 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL539_00600 IPR000847 Transcription regulator HTH, LysR AL539_00600 IPR005119 LysR, substrate-binding AL539_00600 IPR036388 AL539_00600 AL539_00600 IPR036390 AL539_00600 AL539_00620 IPR001950 Translation initiation factor SUI1 AL539_00620 IPR005872 Archaeal/bacterial translation initiation factor SUI1 AL539_00620 IPR036877 AL539_00620 AL539_00625 IPR021753 Protein of unknown function DUF3319 AL539_00630 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site AL539_00630 IPR005905 D-alanine--D-alanine ligase AL539_00630 IPR011095 D-alanine--D-alanine ligase, C-terminal AL539_00630 IPR011127 D-alanine--D-alanine ligase, N-terminal domain AL539_00630 IPR013815 ATP-grasp fold, subdomain 1 AL539_00630 IPR016185 Pre-ATP-grasp domain AL539_00635 IPR007730 Sporulation-related domain AL539_00635 IPR036680 AL539_00635 AL539_00640 IPR000182 GNAT domain AL539_00640 IPR003781 CoA-binding AL539_00640 IPR013815 ATP-grasp fold, subdomain 1 AL539_00640 IPR016102 Succinyl-CoA synthetase-like AL539_00640 IPR016181 Acyl-CoA N-acyltransferase AL539_00640 IPR032875 AL539_00640 AL539_00640 IPR036291 AL539_00640 AL539_00645 IPR000847 Transcription regulator HTH, LysR AL539_00645 IPR005119 LysR, substrate-binding AL539_00645 IPR036388 AL539_00645 AL539_00645 IPR036390 AL539_00645 AL539_00650 IPR000531 TonB-dependent receptor, beta-barrel AL539_00650 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor AL539_00650 IPR011276 TonB-dependent haem/haemoglobin receptor AL539_00650 IPR012910 TonB-dependent receptor, plug AL539_00650 IPR036942 AL539_00650 AL539_00650 IPR037066 AL539_00650 AL539_00660 IPR005886 UDP-glucose 4-epimerase GalE AL539_00660 IPR016040 NAD(P)-binding domain AL539_00660 IPR036291 AL539_00660 AL539_00665 IPR000014 PAS domain AL539_00665 IPR000160 GGDEF domain AL539_00665 IPR003660 HAMP linker domain AL539_00665 IPR013767 PAS fold AL539_00665 IPR029787 Nucleotide cyclase AL539_00665 IPR033417 AL539_00665 AL539_00665 IPR035965 AL539_00665 AL539_00670 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF AL539_00670 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel AL539_00675 IPR003833 Allophanate hydrolase subunit 1 AL539_00675 IPR029000 Cyclophilin-like domain AL539_00680 IPR003778 Allophanate hydrolase subunit 2 AL539_00680 IPR029000 Cyclophilin-like domain AL539_00685 IPR006076 FAD dependent oxidoreductase AL539_00685 IPR036188 AL539_00685 AL539_00685 IPR036291 AL539_00685 AL539_00695 IPR003439 ABC transporter-like AL539_00695 IPR003593 AAA+ ATPase domain AL539_00695 IPR017871 ABC transporter, conserved site AL539_00695 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_00700 IPR008265 Lipase, GDSL, active site AL539_00700 IPR013830 AL539_00700 AL539_00700 IPR036514 AL539_00700 AL539_00705 IPR010758 Trans-2-enoyl-CoA reductase AL539_00705 IPR024906 Enoyl reductase FAD binding domain AL539_00705 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative AL539_00705 IPR036291 AL539_00705 AL539_00710 IPR000160 GGDEF domain AL539_00710 IPR001633 EAL domain AL539_00710 IPR003018 GAF domain AL539_00710 IPR029016 GAF domain-like AL539_00710 IPR029787 Nucleotide cyclase AL539_00710 IPR035919 AL539_00710 AL539_00715 IPR019195 ABC transporter, ATPase, putative AL539_00715 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_00720 IPR001623 DnaJ domain AL539_00720 IPR021059 DnaJ-related protein, N-terminal AL539_00720 IPR036869 AL539_00720 AL539_00725 IPR005123 Oxoglutarate/iron-dependent dioxygenase AL539_00725 IPR026992 Non-haem dioxygenase N-terminal domain AL539_00725 IPR027443 Isopenicillin N synthase-like AL539_00730 IPR014509 Uncharacterised conserved protein UCP020606 AL539_00735 IPR004323 Divalent ion tolerance protein, CutA AL539_00735 IPR011322 Nitrogen regulatory PII-like, alpha/beta AL539_00735 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal AL539_00745 IPR000914 Bacterial extracellular solute-binding protein, family 5 AL539_00745 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain AL539_00750 IPR021811 Protein of unknown function DUF3389 AL539_00755 IPR003736 Phenylacetic acid degradation-related domain AL539_00755 IPR006683 Thioesterase superfamily AL539_00755 IPR029069 HotDog domain AL539_00760 IPR001915 Peptidase M48 AL539_00770 IPR005017 Membrane protein, aromatic hydrocarbon degradation AL539_00775 IPR020009 Extracellular lipase, Pla-1/cef family AL539_00775 IPR025920 Bacterial virulence factor lipase, N-terminal domain AL539_00775 IPR029058 Alpha/Beta hydrolase fold AL539_00780 IPR010305 Protein of unknown function DUF903 AL539_00780 IPR010920 Like-Sm (LSM) domain AL539_00785 IPR013987 PhnA protein, N-terminal AL539_00785 IPR013988 PhnA protein, C-terminal AL539_00785 IPR013991 PhnA protein N-terminal, proteobacterial AL539_00795 IPR005496 Integral membrane protein TerC AL539_00795 IPR022369 Integral membrane protein TerC, riboswitch-linked AL539_00800 IPR004843 Calcineurin-like phosphoesterase domain, apaH type AL539_00800 IPR006179 5'-Nucleotidase/apyrase AL539_00800 IPR008334 5'-Nucleotidase, C-terminal AL539_00800 IPR029052 Metallo-dependent phosphatase-like AL539_00800 IPR036907 AL539_00800 AL539_00805 IPR022602 Protein of unknown function DUF2813 AL539_00805 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_00810 IPR009476 Protein of unknown function DUF1097 AL539_00815 IPR000847 Transcription regulator HTH, LysR AL539_00815 IPR005119 LysR, substrate-binding AL539_00815 IPR036388 AL539_00815 AL539_00815 IPR036390 AL539_00815 AL539_00820 IPR000292 Formate/nitrite transporter AL539_00820 IPR000644 CBS domain AL539_00820 IPR023271 Aquaporin-like AL539_00820 IPR023999 Formate transporter FocA, putative AL539_00820 IPR024002 Formate/nitrite transporter, conserved site AL539_00825 IPR007372 Lipid/polyisoprenoid-binding, YceI-like AL539_00825 IPR023480 Uncharacterised protein family UPF0312/YceI AL539_00825 IPR036761 AL539_00825 AL539_00830 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase AL539_00830 IPR016174 Di-haem cytochrome, transmembrane AL539_00835 IPR018680 Protein of unknown function DUF2164 AL539_00845 IPR001633 EAL domain AL539_00845 IPR035919 AL539_00845 AL539_00850 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site AL539_00850 IPR001650 Helicase, C-terminal AL539_00850 IPR011545 DEAD/DEAH box helicase domain AL539_00850 IPR014001 Helicase, superfamily 1/2, ATP-binding domain AL539_00850 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_00855 IPR007431 Acyl carrier protein phosphodiesterase AL539_00865 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AL539_00865 IPR004090 Chemotaxis methyl-accepting receptor AL539_00875 IPR006439 HAD hydrolase, subfamily IA AL539_00875 IPR023198 Phosphoglycolate phosphatase, domain 2 AL539_00875 IPR023214 HAD-like domain AL539_00875 IPR036412 AL539_00875 AL539_00885 IPR010292 Uncharacterised protein family CreA AL539_00890 IPR011611 Carbohydrate kinase PfkB AL539_00890 IPR029056 Ribokinase-like AL539_00895 IPR000559 Formate-tetrahydrofolate ligase, FTHFS AL539_00895 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site AL539_00895 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_00900 IPR005835 Nucleotidyl transferase AL539_00900 IPR005836 ADP-glucose pyrophosphorylase, conserved site AL539_00900 IPR011004 Trimeric LpxA-like AL539_00900 IPR011831 Glucose-1-phosphate adenylyltransferase AL539_00900 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial AL539_00900 IPR029044 Nucleotide-diphospho-sugar transferases AL539_00905 IPR001223 Glycoside hydrolase, family 18, catalytic domain AL539_00905 IPR001579 Glycoside hydrolase, chitinase active site AL539_00905 IPR003610 Carbohydrate-binding module family 5/12 AL539_00905 IPR009470 Chitinase, C-terminal AL539_00905 IPR011583 Chitinase II AL539_00905 IPR013783 Immunoglobulin-like fold AL539_00905 IPR017853 Glycoside hydrolase, superfamily AL539_00905 IPR029070 Chitinase insertion domain AL539_00905 IPR032798 AL539_00905 AL539_00905 IPR036573 AL539_00905 AL539_00915 IPR009057 Homeodomain-like AL539_00915 IPR009594 Transcription regulator HTH, AraC, N-terminal AL539_00915 IPR018060 DNA binding HTH domain, AraC-type AL539_00915 IPR018062 HTH domain AraC-type, conserved site AL539_00920 IPR001670 Alcohol dehydrogenase, iron-type AL539_00925 IPR012506 YhhN-like AL539_00930 IPR003439 ABC transporter-like AL539_00930 IPR003593 AAA+ ATPase domain AL539_00930 IPR017871 ABC transporter, conserved site AL539_00930 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_00930 IPR030679 AL539_00930 AL539_00935 IPR000515 MetI-like domain AL539_00935 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family AL539_00935 IPR035906 AL539_00935 AL539_00940 IPR001320 Ionotropic glutamate receptor AL539_00940 IPR001638 Extracellular solute-binding protein, family 3 AL539_00945 IPR000515 MetI-like domain AL539_00945 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family AL539_00945 IPR035906 AL539_00945 AL539_00950 IPR001633 EAL domain AL539_00950 IPR035919 AL539_00950 AL539_00955 IPR036986 AL539_00955 AL539_00960 IPR005135 Endonuclease/exonuclease/phosphatase AL539_00960 IPR036691 AL539_00960 AL539_00965 IPR000843 Transcription regulator HTH, LacI AL539_00965 IPR001761 Periplasmic binding protein/LacI sugar binding domain AL539_00965 IPR010982 Lambda repressor-like, DNA-binding domain AL539_00965 IPR012781 D-fructose-responsive transcription factor AL539_00965 IPR028082 Periplasmic binding protein-like I AL539_00970 IPR000032 Phosphocarrier HPr protein-like AL539_00970 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site AL539_00970 IPR002114 Phosphotransferase system, HPr serine phosphorylation site AL539_00970 IPR002178 PTS EIIA type-2 domain AL539_00970 IPR016152 Phosphotransferase/anion transporter AL539_00970 IPR035895 AL539_00970 AL539_00975 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site AL539_00975 IPR011611 Carbohydrate kinase PfkB AL539_00975 IPR017583 Tagatose/fructose phosphokinase AL539_00975 IPR022463 Fructose 1-phosphate kinase AL539_00975 IPR029056 Ribokinase-like AL539_00980 IPR003352 Phosphotransferase system, EIIC AL539_00980 IPR003353 Phosphotransferase system, fructose-specific IIB subunit AL539_00980 IPR003501 Phosphotransferase system, EIIB component, type 2/3 AL539_00980 IPR006327 Phosphotransferase system, fructose IIC component AL539_00980 IPR036095 AL539_00980 AL539_00990 IPR001036 Acriflavin resistance protein AL539_00990 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL539_00995 IPR006143 RND efflux pump, membrane fusion protein AL539_00995 IPR039562 AL539_00995 AL539_01000 IPR006143 RND efflux pump, membrane fusion protein AL539_01000 IPR032317 AL539_01000 AL539_01005 IPR001647 DNA-binding HTH domain, TetR-type AL539_01005 IPR009057 Homeodomain-like AL539_01010 IPR006222 Glycine cleavage T-protein, N-terminal AL539_01010 IPR006223 Glycine cleavage system T protein AL539_01010 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain AL539_01010 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 AL539_01010 IPR028896 Aminomethyltransferase/Dimethylsulfonioproprionate demethylase DmdA AL539_01010 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain AL539_01015 IPR001387 Cro/C1-type helix-turn-helix domain AL539_01015 IPR010982 Lambda repressor-like, DNA-binding domain AL539_01015 IPR011051 RmlC-like cupin domain AL539_01015 IPR013096 Cupin 2, conserved barrel AL539_01015 IPR014710 RmlC-like jelly roll fold AL539_01020 IPR001085 Serine hydroxymethyltransferase AL539_01020 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 AL539_01020 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 AL539_01020 IPR015424 Pyridoxal phosphate-dependent transferase AL539_01020 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site AL539_01020 IPR039429 AL539_01020 AL539_01025 IPR002930 Glycine cleavage system H-protein AL539_01025 IPR011053 Single hybrid motif AL539_01025 IPR017453 Glycine cleavage system H-protein, subgroup AL539_01025 IPR033753 AL539_01025 AL539_01030 IPR003437 Glycine cleavage system P protein, homodimeric AL539_01030 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 AL539_01030 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 AL539_01030 IPR015424 Pyridoxal phosphate-dependent transferase AL539_01030 IPR020581 Glycine cleavage system P protein AL539_01035 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AL539_01035 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL539_01045 IPR001018 Beta-lactamase, class-B, conserved site AL539_01045 IPR001279 Beta-lactamase-like AL539_01045 IPR036866 AL539_01045 AL539_01050 IPR000847 Transcription regulator HTH, LysR AL539_01050 IPR005119 LysR, substrate-binding AL539_01050 IPR036388 AL539_01050 AL539_01050 IPR036390 AL539_01050 AL539_01055 IPR000620 Drug/metabolite transporter AL539_01060 IPR003779 Carboxymuconolactone decarboxylase-like AL539_01060 IPR004675 Alkylhydroperoxidase AhpD core AL539_01060 IPR029032 AhpD-like AL539_01065 IPR009057 Homeodomain-like AL539_01065 IPR018060 DNA binding HTH domain, AraC-type AL539_01070 IPR025588 YcxB-like protein AL539_01075 IPR032036 AL539_01075 AL539_01080 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase AL539_01080 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 AL539_01080 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 AL539_01080 IPR015424 Pyridoxal phosphate-dependent transferase AL539_01085 IPR029074 Immunity protein 29 AL539_01090 IPR006054 DNA polymerase III, epsilon subunit AL539_01090 IPR012337 Ribonuclease H-like domain AL539_01090 IPR013520 Exonuclease, RNase T/DNA polymerase III AL539_01090 IPR036397 AL539_01090 AL539_01095 IPR008969 Carboxypeptidase-like, regulatory domain AL539_01100 IPR003439 ABC transporter-like AL539_01100 IPR003593 AAA+ ATPase domain AL539_01100 IPR011527 ABC transporter type 1, transmembrane domain AL539_01100 IPR011918 ABC transporter, ATP-binding/permease protein AL539_01100 IPR017871 ABC transporter, conserved site AL539_01100 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_01100 IPR036640 AL539_01100 AL539_01110 IPR007404 Protein of unknown function DUF457 AL539_01120 IPR003187 Phospholipase A1 AL539_01120 IPR036541 AL539_01120 AL539_01125 IPR021329 Protein of unknown function DUF2938 AL539_01130 IPR002559 Transposase, IS4-like AL539_01130 IPR012337 Ribonuclease H-like domain AL539_01130 IPR025457 Domain of unknown function DUF4277 AL539_01135 IPR000551 MerR-type HTH domain AL539_01135 IPR009061 DNA binding domain, putative AL539_01140 IPR023635 Peptide deformylase AL539_01140 IPR036821 AL539_01140 AL539_01150 IPR011990 Tetratricopeptide-like helical domain AL539_01165 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_01165 IPR038727 AL539_01165 AL539_01175 IPR006667 SLC41 divalent cation transporters, integral membrane domain AL539_01175 IPR006668 Magnesium transporter, MgtE intracellular domain AL539_01175 IPR036739 AL539_01175 AL539_01175 IPR038048 AL539_01175 AL539_01180 IPR006016 UspA AL539_01185 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core AL539_01190 IPR006683 Thioesterase superfamily AL539_01190 IPR029069 HotDog domain AL539_01195 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AL539_01195 IPR004361 Glyoxalase I AL539_01195 IPR018146 Glyoxalase I, conserved site AL539_01195 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL539_01200 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal AL539_01200 IPR013785 Aldolase-type TIM barrel AL539_01205 IPR004893 Nitrogen fixation protein NifW AL539_01210 IPR002656 Acyltransferase 3 AL539_01210 IPR036514 AL539_01210 AL539_01215 IPR014914 RES AL539_01220 IPR011979 Conserved hypothetical protein CHP02293 AL539_01220 IPR024467 Domain of unknown function DUF2384 AL539_01225 IPR000763 Catalase-peroxidase haem AL539_01225 IPR002016 Haem peroxidase, plant/fungal/bacterial AL539_01225 IPR010255 Haem peroxidase AL539_01225 IPR019794 Peroxidase, active site AL539_01230 IPR002932 Glutamate synthase domain AL539_01230 IPR013785 Aldolase-type TIM barrel AL539_01230 IPR018967 Iron sulphur-containing domain, CDGSH-type AL539_01230 IPR024188 Glutamate synthase large subunit-like protein AL539_01235 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain AL539_01235 IPR036754 AL539_01235 AL539_01240 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent AL539_01240 IPR015590 Aldehyde dehydrogenase domain AL539_01240 IPR016161 Aldehyde/histidinol dehydrogenase AL539_01240 IPR016162 Aldehyde dehydrogenase, N-terminal AL539_01240 IPR016163 Aldehyde dehydrogenase, C-terminal AL539_01240 IPR029510 Aldehyde dehydrogenase, glutamic acid active site AL539_01245 IPR000182 GNAT domain AL539_01245 IPR016181 Acyl-CoA N-acyltransferase AL539_01250 IPR000086 NUDIX hydrolase domain AL539_01250 IPR015797 NUDIX hydrolase domain-like AL539_01250 IPR020084 NUDIX hydrolase, conserved site AL539_01255 IPR000620 Drug/metabolite transporter AL539_01260 IPR000390 Small multidrug resistance protein family AL539_01265 IPR005135 Endonuclease/exonuclease/phosphatase AL539_01265 IPR036691 AL539_01265 AL539_01275 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein AL539_01275 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain AL539_01280 IPR000620 Drug/metabolite transporter AL539_01280 IPR004626 RarD protein AL539_01285 IPR002781 Transmembrane protein TauE like AL539_01290 IPR012902 Prokaryotic N-terminal methylation site AL539_01295 IPR001789 Signal transduction response regulator, receiver domain AL539_01295 IPR002545 CheW-like protein AL539_01295 IPR011006 CheY-like superfamily AL539_01295 IPR024181 Chemotaxis response regulator CheV AL539_01295 IPR036061 AL539_01295 AL539_01305 IPR000792 Transcription regulator LuxR, C-terminal AL539_01305 IPR001789 Signal transduction response regulator, receiver domain AL539_01305 IPR011006 CheY-like superfamily AL539_01305 IPR016032 Signal transduction response regulator, C-terminal effector AL539_01305 IPR036388 AL539_01305 AL539_01310 IPR000847 Transcription regulator HTH, LysR AL539_01310 IPR036388 AL539_01310 AL539_01310 IPR036390 AL539_01310 AL539_01315 IPR000160 GGDEF domain AL539_01315 IPR029787 Nucleotide cyclase AL539_01320 IPR000792 Transcription regulator LuxR, C-terminal AL539_01320 IPR001789 Signal transduction response regulator, receiver domain AL539_01320 IPR011006 CheY-like superfamily AL539_01320 IPR016032 Signal transduction response regulator, C-terminal effector AL539_01320 IPR036388 AL539_01320 AL539_01325 IPR001633 EAL domain AL539_01325 IPR001789 Signal transduction response regulator, receiver domain AL539_01325 IPR011006 CheY-like superfamily AL539_01325 IPR035919 AL539_01325 AL539_01330 IPR001638 Extracellular solute-binding protein, family 3 AL539_01330 IPR001789 Signal transduction response regulator, receiver domain AL539_01330 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_01330 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain AL539_01330 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AL539_01330 IPR011006 CheY-like superfamily AL539_01330 IPR036097 AL539_01330 AL539_01330 IPR036641 AL539_01330 AL539_01330 IPR036890 AL539_01330 AL539_01335 IPR006073 GTP binding domain AL539_01335 IPR016478 GTPase, MTG1 AL539_01335 IPR019991 GTP-binding protein, ribosome biogenesis, YlqF AL539_01335 IPR023179 GTP-binding protein, orthogonal bundle domain AL539_01335 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_01340 IPR004839 Aminotransferase, class I/classII AL539_01340 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 AL539_01340 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 AL539_01340 IPR015424 Pyridoxal phosphate-dependent transferase AL539_01345 IPR001789 Signal transduction response regulator, receiver domain AL539_01345 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_01345 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AL539_01345 IPR011006 CheY-like superfamily AL539_01345 IPR036097 AL539_01345 AL539_01345 IPR036890 AL539_01345 AL539_01350 IPR006439 HAD hydrolase, subfamily IA AL539_01350 IPR023198 Phosphoglycolate phosphatase, domain 2 AL539_01350 IPR023214 HAD-like domain AL539_01350 IPR036412 AL539_01350 AL539_01355 IPR000182 GNAT domain AL539_01355 IPR016181 Acyl-CoA N-acyltransferase AL539_01360 IPR005804 Fatty acid desaturase, type 1 AL539_01360 IPR009160 Delta-9 acyl-CoA desaturase, haem/steroid binding domain-containing AL539_01360 IPR015876 Fatty acid desaturase, type 1, core AL539_01365 IPR004669 C4-dicarboxylate anaerobic carrier AL539_01365 IPR018385 C4-dicarboxylate anaerobic carrier-like AL539_01375 IPR011701 Major facilitator superfamily AL539_01375 IPR036259 AL539_01375 AL539_01380 IPR011856 tRNA endonuclease-like domain AL539_01380 IPR014883 VRR-NUC domain AL539_01385 IPR006315 Outer membrane autotransporter barrel AL539_01385 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel AL539_01385 IPR027385 Outer membrane protein beta-barrel AL539_01390 IPR005220 Viral OB-fold, YgiW AL539_01390 IPR036700 AL539_01390 AL539_01395 IPR001206 Diacylglycerol kinase, catalytic domain AL539_01395 IPR005218 Diacylglycerol/lipid kinase AL539_01395 IPR016064 ATP-NAD kinase-like domain AL539_01395 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 AL539_01395 IPR022433 Lipid kinase YegS AL539_01400 IPR000847 Transcription regulator HTH, LysR AL539_01400 IPR005119 LysR, substrate-binding AL539_01400 IPR036388 AL539_01400 AL539_01400 IPR036390 AL539_01400 AL539_01405 IPR002125 CMP/dCMP deaminase, zinc-binding AL539_01405 IPR016192 APOBEC/CMP deaminase, zinc-binding AL539_01405 IPR016193 Cytidine deaminase-like AL539_01410 IPR025738 Aerotolerance-related protein BatD AL539_01415 IPR002035 von Willebrand factor, type A AL539_01415 IPR036465 AL539_01415 AL539_01420 IPR002035 von Willebrand factor, type A AL539_01420 IPR036465 AL539_01420 AL539_01425 IPR025489 Protein of unknown function (DUF4381 AL539_01430 IPR002881 Domain of unknown function DUF58 AL539_01435 IPR011703 ATPase, AAA-3 AL539_01435 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_01440 IPR007197 Radical SAM AL539_01440 IPR013785 Aldolase-type TIM barrel AL539_01440 IPR023885 4Fe4S-binding SPASM domain AL539_01445 IPR000917 Sulfatase AL539_01445 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha AL539_01445 IPR017850 Alkaline-phosphatase-like, core domain AL539_01450 IPR000847 Transcription regulator HTH, LysR AL539_01450 IPR005119 LysR, substrate-binding AL539_01450 IPR036388 AL539_01450 AL539_01450 IPR036390 AL539_01450 AL539_01455 IPR000917 Sulfatase AL539_01455 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha AL539_01455 IPR017850 Alkaline-phosphatase-like, core domain AL539_01460 IPR001867 Signal transduction response regulator, C-terminal AL539_01460 IPR016032 Signal transduction response regulator, C-terminal effector AL539_01460 IPR036388 AL539_01460 AL539_01465 IPR010706 Fatty acid cis-trans isomerase AL539_01475 IPR001789 Signal transduction response regulator, receiver domain AL539_01475 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_01475 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain AL539_01475 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AL539_01475 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain AL539_01475 IPR011006 CheY-like superfamily AL539_01475 IPR014302 Signal transduction histidine kinase, TMAO sensor TorS AL539_01475 IPR036097 AL539_01475 AL539_01475 IPR036641 AL539_01475 AL539_01475 IPR036890 AL539_01475 AL539_01475 IPR038188 AL539_01475 AL539_01480 IPR001761 Periplasmic binding protein/LacI sugar binding domain AL539_01480 IPR014301 TMAO reductase system periplasmic, TorT AL539_01480 IPR028082 Periplasmic binding protein-like I AL539_01485 IPR004363 Methylglyoxal synthase AL539_01485 IPR011607 Methylglyoxal synthase-like domain AL539_01485 IPR018148 Methylglyoxal synthase, active site AL539_01485 IPR036914 AL539_01485 AL539_01490 IPR013986 DExx box DNA helicase domain AL539_01490 IPR014017 DNA helicase, UvrD-like, C-terminal AL539_01490 IPR022161 DNA helicase IV, N-terminal domain AL539_01490 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_01490 IPR034739 AL539_01490 AL539_01495 IPR010019 Integral membrane protein, YccS AL539_01495 IPR010020 Integral membrane protein, YccS/YhfK AL539_01495 IPR032692 AL539_01495 AL539_01510 IPR010221 VCBS repeat AL539_01510 IPR011049 Serralysin-like metalloprotease, C-terminal AL539_01510 IPR018511 Hemolysin-type calcium-binding conserved site AL539_01510 IPR019959 T1SS-143 repeat-containing domain AL539_01510 IPR019960 Type I secretion C-terminal target domain, VC_A0849 subclass AL539_01520 IPR019629 Uncharacterised protein family HI1736/YgjV AL539_01520 IPR020137 Uncharacterised protein family HI1736 AL539_01525 IPR014543 Uncharacterised conserved protein UCP028291 AL539_01530 IPR000531 TonB-dependent receptor, beta-barrel AL539_01530 IPR010105 TonB-dependent siderophore receptor AL539_01530 IPR010917 TonB-dependent receptor, conserved site AL539_01530 IPR012910 TonB-dependent receptor, plug AL539_01530 IPR036942 AL539_01530 AL539_01530 IPR037066 AL539_01530 AL539_01540 IPR000551 MerR-type HTH domain AL539_01540 IPR009061 DNA binding domain, putative AL539_01540 IPR011789 Cu(I)-responsive transcriptional regulator AL539_01545 IPR003439 ABC transporter-like AL539_01545 IPR003593 AAA+ ATPase domain AL539_01545 IPR017871 ABC transporter, conserved site AL539_01545 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_01550 IPR000522 ABC transporter, permease protein AL539_01550 IPR037294 AL539_01550 AL539_01555 IPR000522 ABC transporter, permease protein AL539_01555 IPR037294 AL539_01555 AL539_01560 IPR002491 ABC transporter periplasmic binding domain AL539_01565 IPR000595 Cyclic nucleotide-binding domain AL539_01565 IPR014710 RmlC-like jelly roll fold AL539_01565 IPR018490 Cyclic nucleotide-binding-like AL539_01570 IPR000845 Nucleoside phosphorylase domain AL539_01570 IPR035994 AL539_01570 AL539_01575 IPR006419 Nicotinamide mononucleotide transporter PnuC AL539_01585 IPR000843 Transcription regulator HTH, LacI AL539_01585 IPR010982 Lambda repressor-like, DNA-binding domain AL539_01585 IPR028082 Periplasmic binding protein-like I AL539_01590 IPR002139 Ribokinase AL539_01590 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site AL539_01590 IPR011611 Carbohydrate kinase PfkB AL539_01590 IPR011877 Ribokinase, bacterial AL539_01590 IPR029056 Ribokinase-like AL539_01595 IPR025997 Periplasmic binding protein domain AL539_01595 IPR028082 Periplasmic binding protein-like I AL539_01600 IPR001851 ABC transporter, permease AL539_01605 IPR003439 ABC transporter-like AL539_01605 IPR003593 AAA+ ATPase domain AL539_01605 IPR017871 ABC transporter, conserved site AL539_01605 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_01610 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU AL539_01610 IPR023064 D-ribose pyranase AL539_01610 IPR023750 RbsD-like domain AL539_01615 IPR000160 GGDEF domain AL539_01615 IPR001633 EAL domain AL539_01615 IPR029787 Nucleotide cyclase AL539_01615 IPR035919 AL539_01615 AL539_01625 IPR032676 AL539_01625 AL539_01640 IPR032816 AL539_01640 AL539_01650 IPR025411 Domain of unknown function DUF4136 AL539_01660 IPR006694 Fatty acid hydroxylase AL539_01665 IPR021243 Protein of unknown function DUF2804 AL539_01670 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase AL539_01670 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal AL539_01670 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain AL539_01670 IPR014362 Glutamate dehydrogenase AL539_01670 IPR033524 AL539_01670 AL539_01670 IPR036291 AL539_01670 AL539_01675 IPR003718 OsmC/Ohr family AL539_01675 IPR015946 K homology domain-like, alpha/beta AL539_01675 IPR036102 AL539_01675 AL539_01680 IPR001789 Signal transduction response regulator, receiver domain AL539_01680 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_01680 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain AL539_01680 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AL539_01680 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain AL539_01680 IPR011006 CheY-like superfamily AL539_01680 IPR036097 AL539_01680 AL539_01680 IPR036641 AL539_01680 AL539_01680 IPR036890 AL539_01680 AL539_01685 IPR004852 Di-haem cytochrome c peroxidase AL539_01685 IPR009056 Cytochrome c-like domain AL539_01685 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase AL539_01685 IPR036909 AL539_01685 AL539_01690 IPR002810 NfeD-like, C-terminal domain AL539_01690 IPR029045 ClpP/crotonase-like domain AL539_01695 IPR001107 Band 7 protein AL539_01695 IPR001972 Stomatin family AL539_01695 IPR036013 AL539_01695 AL539_01700 IPR009050 Globin-like AL539_01700 IPR012292 Globin, structural domain AL539_01705 IPR000415 Nitroreductase-like AL539_01705 IPR029479 Nitroreductase AL539_01710 IPR003439 ABC transporter-like AL539_01710 IPR003593 AAA+ ATPase domain AL539_01710 IPR017871 ABC transporter, conserved site AL539_01710 IPR022473 ABC transporter, Choline, ATP-binding subunit AL539_01710 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_01715 IPR000515 MetI-like domain AL539_01715 IPR017784 ABC transporter, choline, permease protein AL539_01715 IPR035906 AL539_01715 AL539_01720 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain AL539_01720 IPR017783 ABC transporter, choline, substrate-binding protein AL539_01725 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal AL539_01725 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal AL539_01725 IPR011533 Oxygen-dependent choline dehydrogenase AL539_01725 IPR012132 Glucose-methanol-choline oxidoreductase AL539_01725 IPR027424 Glucose Oxidase, domain 2 AL539_01725 IPR036188 AL539_01725 AL539_01730 IPR011264 NAD/NADP-dependent betaine aldehyde dehydrogenase AL539_01730 IPR015590 Aldehyde dehydrogenase domain AL539_01730 IPR016161 Aldehyde/histidinol dehydrogenase AL539_01730 IPR016162 Aldehyde dehydrogenase, N-terminal AL539_01730 IPR016163 Aldehyde dehydrogenase, C-terminal AL539_01730 IPR029510 Aldehyde dehydrogenase, glutamic acid active site AL539_01735 IPR001647 DNA-binding HTH domain, TetR-type AL539_01735 IPR009057 Homeodomain-like AL539_01735 IPR017757 Transcriptional repressor BetI AL539_01735 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AL539_01735 IPR036271 AL539_01735 AL539_01735 IPR039538 AL539_01735 AL539_01740 IPR000160 GGDEF domain AL539_01740 IPR011990 Tetratricopeptide-like helical domain AL539_01740 IPR019734 Tetratricopeptide repeat AL539_01740 IPR029787 Nucleotide cyclase AL539_01745 IPR002347 Glucose/ribitol dehydrogenase AL539_01745 IPR020904 Short-chain dehydrogenase/reductase, conserved site AL539_01745 IPR036291 AL539_01745 AL539_01750 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site AL539_01750 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding AL539_01750 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like AL539_01750 IPR011548 3-hydroxyisobutyrate dehydrogenase AL539_01750 IPR013328 Dehydrogenase, multihelical AL539_01750 IPR015815 Hydroxy monocarboxylic acid anion dehydrogenase, HIBADH-type AL539_01750 IPR029154 NADP-dependent 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain AL539_01750 IPR036291 AL539_01750 AL539_01755 IPR029045 ClpP/crotonase-like domain AL539_01755 IPR032259 AL539_01755 AL539_01760 IPR001753 Crotonase superfamily AL539_01760 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site AL539_01760 IPR029045 ClpP/crotonase-like domain AL539_01765 IPR006089 Acyl-CoA dehydrogenase, conserved site AL539_01765 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AL539_01765 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AL539_01765 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain AL539_01765 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AL539_01765 IPR036250 AL539_01765 AL539_01765 IPR037069 AL539_01765 AL539_01770 IPR010061 Methylmalonate-semialdehyde dehydrogenase AL539_01770 IPR015590 Aldehyde dehydrogenase domain AL539_01770 IPR016160 Aldehyde dehydrogenase, cysteine active site AL539_01770 IPR016161 Aldehyde/histidinol dehydrogenase AL539_01770 IPR016162 Aldehyde dehydrogenase, N-terminal AL539_01770 IPR016163 Aldehyde dehydrogenase, C-terminal AL539_01775 IPR002155 Thiolase AL539_01775 IPR016039 Thiolase-like AL539_01775 IPR020610 Thiolase, active site AL539_01775 IPR020615 Thiolase, acyl-enzyme intermediate active site AL539_01775 IPR020616 Thiolase, N-terminal AL539_01775 IPR020617 Thiolase, C-terminal AL539_01780 IPR000551 MerR-type HTH domain AL539_01780 IPR009061 DNA binding domain, putative AL539_01780 IPR015358 Transcription regulator MerR, DNA binding AL539_01785 IPR006089 Acyl-CoA dehydrogenase, conserved site AL539_01785 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AL539_01785 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AL539_01785 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain AL539_01785 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AL539_01785 IPR036250 AL539_01785 AL539_01785 IPR037069 AL539_01785 AL539_01790 IPR029045 ClpP/crotonase-like domain AL539_01790 IPR034733 AL539_01790 AL539_01795 IPR001753 Crotonase superfamily AL539_01795 IPR014748 Crontonase, C-terminal AL539_01795 IPR029045 ClpP/crotonase-like domain AL539_01800 IPR000089 Biotin/lipoyl attachment AL539_01800 IPR001882 Biotin-binding site AL539_01800 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain AL539_01800 IPR005481 Carbamoyl-phosphate synthase, large subunit, N-terminal AL539_01800 IPR005482 Biotin carboxylase, C-terminal AL539_01800 IPR011053 Single hybrid motif AL539_01800 IPR011054 Rudiment single hybrid motif AL539_01800 IPR016185 Pre-ATP-grasp domain AL539_01805 IPR000891 Pyruvate carboxyltransferase AL539_01805 IPR013785 Aldolase-type TIM barrel AL539_01810 IPR014991 Protein of unknown function DUF1840 AL539_01815 IPR006685 Mechanosensitive ion channel MscS AL539_01815 IPR010920 Like-Sm (LSM) domain AL539_01815 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 AL539_01815 IPR011066 Mechanosensitive ion channel MscS, C-terminal AL539_01815 IPR023408 AL539_01815 AL539_01825 IPR001451 Bacterial transferase hexapeptide repeat AL539_01825 IPR011004 Trimeric LpxA-like AL539_01825 IPR018357 Hexapeptide transferase, conserved site AL539_01825 IPR024688 Maltose/galactoside acetyltransferase AL539_01830 IPR000524 Transcription regulator HTH, GntR AL539_01830 IPR004839 Aminotransferase, class I/classII AL539_01830 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 AL539_01830 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 AL539_01830 IPR015424 Pyridoxal phosphate-dependent transferase AL539_01830 IPR036388 AL539_01830 AL539_01830 IPR036390 AL539_01830 AL539_01835 IPR002585 Cytochrome d ubiquinol oxidase, subunit I AL539_01840 IPR003317 Cytochrome d ubiquinol oxidase, subunit II AL539_01845 IPR018895 Protein of unknown function DUF2474 AL539_01855 IPR006439 HAD hydrolase, subfamily IA AL539_01855 IPR023198 Phosphoglycolate phosphatase, domain 2 AL539_01855 IPR023214 HAD-like domain AL539_01855 IPR036412 AL539_01855 AL539_01860 IPR000847 Transcription regulator HTH, LysR AL539_01860 IPR005119 LysR, substrate-binding AL539_01860 IPR036388 AL539_01860 AL539_01860 IPR036390 AL539_01860 AL539_01865 IPR005128 Alpha-acetolactate decarboxylase AL539_01870 IPR000399 TPP-binding enzyme, conserved site AL539_01870 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding AL539_01870 IPR012000 Thiamine pyrophosphate enzyme, central domain AL539_01870 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain AL539_01870 IPR012782 Acetolactate synthase, catabolic AL539_01870 IPR029035 DHS-like NAD/FAD-binding domain AL539_01870 IPR029061 Thiamin diphosphate-binding fold AL539_01875 IPR002347 Glucose/ribitol dehydrogenase AL539_01875 IPR020904 Short-chain dehydrogenase/reductase, conserved site AL539_01875 IPR036291 AL539_01875 AL539_01880 IPR000060 BCCT transporter family AL539_01880 IPR018093 BCCT transporter, conserved site AL539_01885 IPR008854 TPMT family AL539_01885 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like AL539_01895 IPR036909 AL539_01895 AL539_01910 IPR008854 TPMT family AL539_01910 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like AL539_01915 IPR000873 AMP-dependent synthetase/ligase AL539_01920 IPR003439 ABC transporter-like AL539_01920 IPR003593 AAA+ ATPase domain AL539_01920 IPR017871 ABC transporter, conserved site AL539_01920 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_01925 IPR028081 Leucine-binding protein domain AL539_01925 IPR028082 Periplasmic binding protein-like I AL539_01930 IPR001851 ABC transporter, permease AL539_01935 IPR001851 ABC transporter, permease AL539_01940 IPR000873 AMP-dependent synthetase/ligase AL539_01940 IPR020845 AMP-binding, conserved site AL539_01945 IPR003439 ABC transporter-like AL539_01945 IPR003593 AAA+ ATPase domain AL539_01945 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_01945 IPR032823 AL539_01945 AL539_01955 IPR036188 AL539_01955 AL539_01960 IPR012255 Electron transfer flavoprotein, beta subunit AL539_01960 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL539_01960 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal AL539_01965 IPR001308 Electron transfer flavoprotein, alpha subunit AL539_01965 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL539_01965 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal AL539_01965 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal AL539_01965 IPR018206 Electron transfer flavoprotein, alpha subunit, C-terminal, conserved site AL539_01965 IPR029035 DHS-like NAD/FAD-binding domain AL539_01970 IPR000873 AMP-dependent synthetase/ligase AL539_01970 IPR005914 Acetoacetyl-CoA synthase AL539_01970 IPR020845 AMP-binding, conserved site AL539_01970 IPR025110 AMP-binding enzyme C-terminal domain AL539_01975 IPR001996 Phosphotransferase system, IIB component, type 1 AL539_01975 IPR003352 Phosphotransferase system, EIIC AL539_01975 IPR010975 Phosphotransferase system, alpha-glucoside-specific IIBC component AL539_01975 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site AL539_01975 IPR036878 AL539_01975 AL539_01980 IPR001088 Glycoside hydrolase, family 4 AL539_01980 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal AL539_01980 IPR019802 Glycoside hydrolase, family 4, conserved site AL539_01980 IPR022616 Glycosyl hydrolase, family 4, C-terminal AL539_01980 IPR036291 AL539_01980 AL539_01985 IPR000524 Transcription regulator HTH, GntR AL539_01985 IPR011663 UbiC transcription regulator-associated AL539_01985 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AL539_01985 IPR036388 AL539_01985 AL539_01985 IPR036390 AL539_01985 AL539_01990 IPR005133 Na+/H+ antiporter subunit G AL539_01995 IPR007208 Na(+)/H(+) antiporter subunit F-like AL539_02000 IPR002758 Na+/H+ antiporter subunit E AL539_02005 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase AL539_02005 IPR003918 NADH:ubiquinone oxidoreductase AL539_02010 IPR039428 AL539_02010 AL539_02015 IPR001516 NADH:ubiquinone oxidoreductase, chain 5/L, N-terminal AL539_02015 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase AL539_02015 IPR007182 Na+/H+ antiporter MnhB subunit-related protein AL539_02015 IPR025383 Domain of unknown function DUF4040 AL539_02025 IPR006016 UspA AL539_02030 IPR002347 Glucose/ribitol dehydrogenase AL539_02030 IPR020904 Short-chain dehydrogenase/reductase, conserved site AL539_02030 IPR036291 AL539_02030 AL539_02035 IPR000847 Transcription regulator HTH, LysR AL539_02035 IPR005119 LysR, substrate-binding AL539_02035 IPR036388 AL539_02035 AL539_02035 IPR036390 AL539_02035 AL539_02040 IPR003313 AraC-type arabinose-binding/dimerisation domain AL539_02040 IPR009057 Homeodomain-like AL539_02040 IPR011051 RmlC-like cupin domain AL539_02040 IPR014710 RmlC-like jelly roll fold AL539_02040 IPR018060 DNA binding HTH domain, AraC-type AL539_02045 IPR001958 Tetracycline resistance protein, TetA/multidrug resistance protein MdtG AL539_02045 IPR011701 Major facilitator superfamily AL539_02045 IPR036259 AL539_02045 AL539_02055 IPR023346 Lysozyme-like domain AL539_02060 IPR025425 Domain of unknown function DUF4150 AL539_02065 IPR017732 Type IV / VI secretion system, DotU AL539_02065 IPR038522 AL539_02065 AL539_02070 IPR010263 Protein of unknown function DUF876 AL539_02075 IPR017734 Type VI secretion system, lipoprotein SciN AL539_02075 IPR038706 AL539_02075 AL539_02080 IPR000253 Forkhead-associated (FHA) domain AL539_02080 IPR008984 SMAD/FHA domain AL539_02085 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel AL539_02090 IPR010657 ImpA, N-terminal AL539_02095 IPR009612 ImcF-related AL539_02095 IPR010623 Domain of unknown function DUF1215 AL539_02095 IPR017731 Type VI secretion system, IcmF AL539_02095 IPR025743 ImcF-related, N-terminal domain AL539_02100 IPR000485 AsnC-type HTH domain AL539_02100 IPR011008 Dimeric alpha-beta barrel AL539_02100 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AL539_02100 IPR019887 Transcription regulator AsnC-type, C-terminal AL539_02100 IPR019888 Transcription regulator AsnC-type AL539_02100 IPR036388 AL539_02100 AL539_02100 IPR036390 AL539_02100 AL539_02105 IPR010732 Protein of unknown function DUF1305 AL539_02110 IPR010272 Type VI secretion system, VCA0110 AL539_02115 IPR007048 GpW/Gp25/anti-adapter protein IraD AL539_02115 IPR017737 Type VI secretion system, lysozyme-related protein AL539_02120 IPR010269 Protein of unknown function DUF877 AL539_02125 IPR008312 Uncharacterised conserved protein UCP028301 AL539_02130 IPR010657 ImpA, N-terminal AL539_02130 IPR017739 Type VI secretion system-associated, VCA0119 AL539_02135 IPR000719 Protein kinase domain AL539_02135 IPR008271 Serine/threonine-protein kinase, active site AL539_02135 IPR011009 Protein kinase-like domain AL539_02145 IPR018683 Domain of unknown function DUF2169 AL539_02160 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein AL539_02160 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset AL539_02160 IPR037026 AL539_02160 AL539_02165 IPR008514 Type VI secretion system effector, Hcp AL539_02165 IPR036624 AL539_02165 AL539_02170 IPR001270 ClpA/B family AL539_02170 IPR003593 AAA+ ATPase domain AL539_02170 IPR003959 ATPase, AAA-type, core AL539_02170 IPR017729 Type VI secretion system, ATPase ClpV1 AL539_02170 IPR018368 ClpA/B, conserved site 1 AL539_02170 IPR019489 Clp ATPase, C-terminal AL539_02170 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_02170 IPR028299 ClpA/B, conserved site 2 AL539_02170 IPR036628 AL539_02170 AL539_02175 IPR002078 RNA polymerase sigma factor 54 interaction domain AL539_02175 IPR002197 DNA binding HTH domain, Fis-type AL539_02175 IPR003018 GAF domain AL539_02175 IPR003593 AAA+ ATPase domain AL539_02175 IPR009057 Homeodomain-like AL539_02175 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AL539_02175 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AL539_02175 IPR025944 Sigma-54 interaction domain, conserved site AL539_02175 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_02175 IPR029016 GAF domain-like AL539_02180 IPR006664 Outer membrane protein, bacterial AL539_02180 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal AL539_02180 IPR036737 AL539_02180 AL539_02200 IPR011055 Duplicated hybrid motif AL539_02200 IPR016047 Peptidase M23 AL539_02225 IPR002178 PTS EIIA type-2 domain AL539_02225 IPR003352 Phosphotransferase system, EIIC AL539_02225 IPR003353 Phosphotransferase system, fructose-specific IIB subunit AL539_02225 IPR003501 Phosphotransferase system, EIIB component, type 2/3 AL539_02225 IPR004715 Phosphotransferase system, IIA component fructose subfamily AL539_02225 IPR006327 Phosphotransferase system, fructose IIC component AL539_02225 IPR016152 Phosphotransferase/anion transporter AL539_02225 IPR036095 AL539_02225 AL539_02230 IPR003353 Phosphotransferase system, fructose-specific IIB subunit AL539_02230 IPR003501 Phosphotransferase system, EIIB component, type 2/3 AL539_02230 IPR036095 AL539_02230 AL539_02235 IPR002178 PTS EIIA type-2 domain AL539_02235 IPR016152 Phosphotransferase/anion transporter AL539_02235 IPR016910 Uncharacterised conserved protein UCP029195, PTS-EIIA 2 AL539_02235 IPR035895 AL539_02235 AL539_02240 IPR009057 Homeodomain-like AL539_02240 IPR018060 DNA binding HTH domain, AraC-type AL539_02240 IPR018062 HTH domain AraC-type, conserved site AL539_02240 IPR020449 Transcription regulator HTH, AraC- type AL539_02245 IPR002178 PTS EIIA type-2 domain AL539_02245 IPR003352 Phosphotransferase system, EIIC AL539_02245 IPR003353 Phosphotransferase system, fructose-specific IIB subunit AL539_02245 IPR003501 Phosphotransferase system, EIIB component, type 2/3 AL539_02245 IPR004715 Phosphotransferase system, IIA component fructose subfamily AL539_02245 IPR006327 Phosphotransferase system, fructose IIC component AL539_02245 IPR016152 Phosphotransferase/anion transporter AL539_02245 IPR036095 AL539_02245 AL539_02250 IPR001250 Mannose-6-phosphate isomerase, type I AL539_02250 IPR011051 RmlC-like cupin domain AL539_02250 IPR014710 RmlC-like jelly roll fold AL539_02250 IPR016305 Mannose-6-phosphate isomerase AL539_02250 IPR018050 Phosphomannose isomerase, type I, conserved site AL539_02255 IPR002178 PTS EIIA type-2 domain AL539_02255 IPR016152 Phosphotransferase/anion transporter AL539_02260 IPR003353 Phosphotransferase system, fructose-specific IIB subunit AL539_02260 IPR003501 Phosphotransferase system, EIIB component, type 2/3 AL539_02260 IPR006327 Phosphotransferase system, fructose IIC component AL539_02260 IPR036095 AL539_02260 AL539_02265 IPR005887 Alpha-1,2-mannosidase, putative AL539_02265 IPR008928 Six-hairpin glycosidase-like AL539_02265 IPR012939 Glycosyl hydrolase family 92 AL539_02265 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup AL539_02270 IPR005887 Alpha-1,2-mannosidase, putative AL539_02270 IPR008928 Six-hairpin glycosidase-like AL539_02270 IPR012939 Glycosyl hydrolase family 92 AL539_02270 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup AL539_02275 IPR005887 Alpha-1,2-mannosidase, putative AL539_02275 IPR008928 Six-hairpin glycosidase-like AL539_02275 IPR012939 Glycosyl hydrolase family 92 AL539_02280 IPR005887 Alpha-1,2-mannosidase, putative AL539_02280 IPR008928 Six-hairpin glycosidase-like AL539_02280 IPR012939 Glycosyl hydrolase family 92 AL539_02280 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup AL539_02285 IPR005887 Alpha-1,2-mannosidase, putative AL539_02285 IPR008928 Six-hairpin glycosidase-like AL539_02285 IPR012939 Glycosyl hydrolase family 92 AL539_02285 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup AL539_02310 IPR001093 IMP dehydrogenase/GMP reductase AL539_02310 IPR005993 Guanosine monophosphate reductase 1 AL539_02310 IPR013785 Aldolase-type TIM barrel AL539_02310 IPR015875 IMP dehydrogenase / GMP reductase, conserved site AL539_02315 IPR000631 YjeF C-terminal domain AL539_02315 IPR004443 YjeF N-terminal domain AL539_02315 IPR017953 Carbohydrate kinase, predicted, conserved site AL539_02315 IPR029056 Ribokinase-like AL539_02315 IPR030677 AL539_02315 AL539_02315 IPR036652 AL539_02315 AL539_02320 IPR013767 PAS fold AL539_02320 IPR035965 AL539_02320 AL539_02325 IPR001789 Signal transduction response regulator, receiver domain AL539_02325 IPR011006 CheY-like superfamily AL539_02325 IPR028976 CheC-like domain AL539_02330 IPR023210 NADP-dependent oxidoreductase domain AL539_02330 IPR036812 AL539_02330 AL539_02335 IPR010982 Lambda repressor-like, DNA-binding domain AL539_02345 IPR001807 Chloride channel, voltage gated AL539_02345 IPR014743 Chloride channel, core AL539_02345 IPR023861 Chloride channel, ClcA AL539_02350 IPR004695 Voltage-dependent anion channel AL539_02350 IPR038665 AL539_02350 AL539_02355 IPR001474 GTP cyclohydrolase I AL539_02355 IPR018234 GTP cyclohydrolase I, conserved site AL539_02355 IPR020602 GTP cyclohydrolase I domain AL539_02360 IPR001453 Molybdopterin binding domain AL539_02360 IPR005110 MoeA, N-terminal and linker domain AL539_02360 IPR005111 MoeA, C-terminal, domain IV AL539_02360 IPR008284 Molybdenum cofactor biosynthesis, conserved site AL539_02360 IPR036135 AL539_02360 AL539_02360 IPR036425 AL539_02360 AL539_02360 IPR036688 AL539_02360 AL539_02365 IPR000594 UBA/THIF-type NAD/FAD binding fold AL539_02365 IPR012730 Molybdopterin synthase sulfurylase MoeB AL539_02365 IPR035985 AL539_02365 AL539_02370 IPR011042 Six-bladed beta-propeller, TolB-like AL539_02370 IPR031025 AL539_02370 AL539_02370 IPR032295 AL539_02370 AL539_02380 IPR001763 Rhodanese-like domain AL539_02380 IPR036873 AL539_02380 AL539_02385 IPR007324 Sugar-binding domain, putative AL539_02385 IPR037171 AL539_02385 AL539_02400 IPR001585 Transaldolase AL539_02400 IPR004730 Transaldolase type 1 AL539_02400 IPR013785 Aldolase-type TIM barrel AL539_02400 IPR018225 Transaldolase, active site AL539_02405 IPR005474 Transketolase, N-terminal AL539_02405 IPR005475 Transketolase-like, pyrimidine-binding domain AL539_02405 IPR005478 Transketolase, bacterial-like AL539_02405 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II AL539_02405 IPR020826 Transketolase binding site AL539_02405 IPR029061 Thiamin diphosphate-binding fold AL539_02405 IPR033248 AL539_02405 AL539_02410 IPR000014 PAS domain AL539_02410 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AL539_02410 IPR013655 PAS fold-3 AL539_02410 IPR035965 AL539_02410 AL539_02415 IPR011701 Major facilitator superfamily AL539_02415 IPR036259 AL539_02415 AL539_02420 IPR006218 DAHP synthetase I/KDSA AL539_02420 IPR006219 DHAP synthase, class 1 AL539_02420 IPR013785 Aldolase-type TIM barrel AL539_02430 IPR006664 Outer membrane protein, bacterial AL539_02430 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal AL539_02430 IPR006690 Outer membrane protein, OmpA-like, conserved site AL539_02430 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel AL539_02430 IPR027385 Outer membrane protein beta-barrel AL539_02430 IPR036737 AL539_02430 AL539_02435 IPR006439 HAD hydrolase, subfamily IA AL539_02435 IPR010976 Beta-phosphoglucomutase hydrolase AL539_02435 IPR023198 Phosphoglycolate phosphatase, domain 2 AL539_02435 IPR023214 HAD-like domain AL539_02435 IPR036412 AL539_02435 AL539_02440 IPR000352 Peptide chain release factor class I/class II AL539_02445 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AL539_02450 IPR001036 Acriflavin resistance protein AL539_02450 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 AL539_02450 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL539_02455 IPR006143 RND efflux pump, membrane fusion protein AL539_02455 IPR032317 AL539_02455 AL539_02460 IPR002125 CMP/dCMP deaminase, zinc-binding AL539_02460 IPR016192 APOBEC/CMP deaminase, zinc-binding AL539_02460 IPR016193 Cytidine deaminase-like AL539_02460 IPR016473 Deoxycytidylate deaminase AL539_02465 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site AL539_02465 IPR002933 Peptidase M20 AL539_02465 IPR010161 Peptidase M20B, tripeptide aminopeptidase AL539_02465 IPR011650 Peptidase M20, dimerisation domain AL539_02465 IPR036264 AL539_02465 AL539_02470 IPR016875 Uncharacterised conserved protein UCP028200 AL539_02480 IPR000792 Transcription regulator LuxR, C-terminal AL539_02480 IPR001789 Signal transduction response regulator, receiver domain AL539_02480 IPR011006 CheY-like superfamily AL539_02480 IPR016032 Signal transduction response regulator, C-terminal effector AL539_02485 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_02485 IPR003660 HAMP linker domain AL539_02485 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain AL539_02485 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing AL539_02485 IPR029095 NarX-like, N-terminal AL539_02485 IPR036890 AL539_02485 AL539_02490 IPR004496 Ferredoxin-type protein NapF AL539_02490 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL539_02490 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL539_02495 IPR005623 Chaperone NapD, nitrate reductase assembly AL539_02500 IPR006656 Molybdopterin oxidoreductase AL539_02500 IPR006657 Molydopterin dinucleotide-binding domain AL539_02500 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain AL539_02500 IPR009010 Aspartate decarboxylase-like domain AL539_02500 IPR010051 Periplasmic nitrate reductase, large subunit AL539_02500 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site AL539_02505 IPR005591 Nitrate reductase cytochrome c-type subunit NapB AL539_02505 IPR036280 AL539_02505 AL539_02510 IPR005126 NapC/NirT cytochrome c, N-terminal AL539_02510 IPR024717 Denitrification system component NapC/NirT/NrfH AL539_02510 IPR036280 AL539_02510 AL539_02510 IPR038266 AL539_02510 AL539_02515 IPR014175 Conserved hypothetical protein CHP02808 AL539_02520 IPR010941 Poly-beta-hydroxybutyrate polymerase, central domain AL539_02520 IPR010963 Poly(R)-hydroxyalkanoic acid synthase, class I AL539_02520 IPR029058 Alpha/Beta hydrolase fold AL539_02525 IPR014176 Phasin, subfamily 3 AL539_02525 IPR018968 Phasin AL539_02530 IPR002155 Thiolase AL539_02530 IPR016039 Thiolase-like AL539_02530 IPR020610 Thiolase, active site AL539_02530 IPR020613 Thiolase, conserved site AL539_02530 IPR020615 Thiolase, acyl-enzyme intermediate active site AL539_02530 IPR020616 Thiolase, N-terminal AL539_02530 IPR020617 Thiolase, C-terminal AL539_02535 IPR002347 Glucose/ribitol dehydrogenase AL539_02535 IPR011283 Acetoacetyl-CoA reductase AL539_02535 IPR020904 Short-chain dehydrogenase/reductase, conserved site AL539_02535 IPR036291 AL539_02535 AL539_02540 IPR001123 Lysine-type exporter protein (LYSE/YGGA) AL539_02550 IPR005665 Protein-export membrane protein SecF, bacterial AL539_02550 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AL539_02550 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site AL539_02550 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial AL539_02555 IPR005791 Protein translocase subunit SecD AL539_02555 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AL539_02555 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site AL539_02555 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial AL539_02555 IPR027398 SecD export protein N-terminal TM domain AL539_02565 IPR003646 SH3-like domain, bacterial-type AL539_02580 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like AL539_02585 IPR000485 AsnC-type HTH domain AL539_02585 IPR011008 Dimeric alpha-beta barrel AL539_02585 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AL539_02585 IPR019887 Transcription regulator AsnC-type, C-terminal AL539_02585 IPR019888 Transcription regulator AsnC-type AL539_02585 IPR036388 AL539_02585 AL539_02585 IPR036390 AL539_02585 AL539_02590 IPR000620 Drug/metabolite transporter AL539_02595 IPR009875 PilZ domain AL539_02595 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal AL539_02595 IPR012349 FMN-binding split barrel AL539_02600 IPR016926 Uncharacterised conserved protein UCP029594 AL539_02600 IPR022604 Protein of unknown function DUF2955 AL539_02605 IPR039562 AL539_02605 AL539_02610 IPR000835 MarR-type HTH domain AL539_02610 IPR023187 Transcriptional regulator MarR-type, conserved site AL539_02610 IPR036388 AL539_02610 AL539_02610 IPR036390 AL539_02610 AL539_02615 IPR001789 Signal transduction response regulator, receiver domain AL539_02615 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_02615 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain AL539_02615 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AL539_02615 IPR011006 CheY-like superfamily AL539_02615 IPR015387 LuxQ, periplasmic AL539_02615 IPR029151 Periplasmic sensor domain-like AL539_02615 IPR035965 AL539_02615 AL539_02615 IPR036097 AL539_02615 AL539_02615 IPR036890 AL539_02615 AL539_02620 IPR025997 Periplasmic binding protein domain AL539_02620 IPR028082 Periplasmic binding protein-like I AL539_02630 IPR000305 GIY-YIG nuclease superfamily AL539_02630 IPR035901 AL539_02630 AL539_02635 IPR007432 Protein of unknown function DUF480 AL539_02635 IPR036388 AL539_02635 AL539_02635 IPR036390 AL539_02635 AL539_02645 IPR007458 Protein of unknown function DUF496 AL539_02650 IPR002528 Multi antimicrobial extrusion protein AL539_02655 IPR001789 Signal transduction response regulator, receiver domain AL539_02655 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_02655 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain AL539_02655 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AL539_02655 IPR011006 CheY-like superfamily AL539_02655 IPR036097 AL539_02655 AL539_02655 IPR036890 AL539_02655 AL539_02660 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I AL539_02660 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain AL539_02660 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain AL539_02660 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site AL539_02660 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family AL539_02660 IPR036291 AL539_02660 AL539_02675 IPR001123 Lysine-type exporter protein (LYSE/YGGA) AL539_02680 IPR000847 Transcription regulator HTH, LysR AL539_02680 IPR005119 LysR, substrate-binding AL539_02680 IPR036388 AL539_02680 AL539_02680 IPR036390 AL539_02680 AL539_02685 IPR000485 AsnC-type HTH domain AL539_02685 IPR011008 Dimeric alpha-beta barrel AL539_02685 IPR019887 Transcription regulator AsnC-type, C-terminal AL539_02685 IPR019888 Transcription regulator AsnC-type AL539_02685 IPR036388 AL539_02685 AL539_02685 IPR036390 AL539_02685 AL539_02695 IPR002293 Amino acid/polyamine transporter I AL539_02700 IPR000524 Transcription regulator HTH, GntR AL539_02700 IPR004839 Aminotransferase, class I/classII AL539_02700 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 AL539_02700 IPR015424 Pyridoxal phosphate-dependent transferase AL539_02700 IPR036388 AL539_02700 AL539_02700 IPR036390 AL539_02700 AL539_02705 IPR012349 FMN-binding split barrel AL539_02705 IPR024747 Pyridoxamine 5'-phosphate oxidase-related AL539_02710 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_02710 IPR003660 HAMP linker domain AL539_02710 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain AL539_02710 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AL539_02710 IPR036097 AL539_02710 AL539_02710 IPR036890 AL539_02710 AL539_02715 IPR001789 Signal transduction response regulator, receiver domain AL539_02715 IPR001867 Signal transduction response regulator, C-terminal AL539_02715 IPR011006 CheY-like superfamily AL539_02715 IPR016032 Signal transduction response regulator, C-terminal effector AL539_02715 IPR036388 AL539_02715 AL539_02735 IPR009057 Homeodomain-like AL539_02735 IPR018060 DNA binding HTH domain, AraC-type AL539_02735 IPR020449 Transcription regulator HTH, AraC- type AL539_02735 IPR032687 AL539_02735 AL539_02745 IPR039562 AL539_02745 AL539_02750 IPR004147 UbiB domain AL539_02750 IPR011009 Protein kinase-like domain AL539_02755 IPR006667 SLC41 divalent cation transporters, integral membrane domain AL539_02755 IPR006668 Magnesium transporter, MgtE intracellular domain AL539_02755 IPR036739 AL539_02755 AL539_02755 IPR038048 AL539_02755 AL539_02760 IPR001248 Permease, cytosine/purines, uracil, thiamine, allantoin AL539_02760 IPR038271 AL539_02760 AL539_02765 IPR011059 Metal-dependent hydrolase, composite domain AL539_02765 IPR013108 Amidohydrolase 3 AL539_02765 IPR032466 AL539_02765 AL539_02770 IPR003607 HD/PDEase domain AL539_02770 IPR006674 HD domain AL539_02775 IPR001387 Cro/C1-type helix-turn-helix domain AL539_02775 IPR010982 Lambda repressor-like, DNA-binding domain AL539_02785 IPR002123 Phospholipid/glycerol acyltransferase AL539_02785 IPR011701 Major facilitator superfamily AL539_02785 IPR022324 Bacilysin exporter BacE, putative AL539_02785 IPR036259 AL539_02785 AL539_02790 IPR029058 Alpha/Beta hydrolase fold AL539_02795 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB AL539_02795 IPR017945 DHBP synthase RibB-like alpha/beta domain AL539_02800 IPR000889 Glutathione peroxidase AL539_02800 IPR029759 Glutathione peroxidase active site AL539_02800 IPR036249 AL539_02800 AL539_02805 IPR021836 Protein of unknown function DUF3429 AL539_02815 IPR001853 DSBA-like thioredoxin domain AL539_02815 IPR017937 Thioredoxin, conserved site AL539_02815 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL AL539_02815 IPR036249 AL539_02815 AL539_02825 IPR013783 Immunoglobulin-like fold AL539_02825 IPR014756 Immunoglobulin E-set AL539_02830 IPR001789 Signal transduction response regulator, receiver domain AL539_02830 IPR001867 Signal transduction response regulator, C-terminal AL539_02830 IPR011006 CheY-like superfamily AL539_02830 IPR016032 Signal transduction response regulator, C-terminal effector AL539_02830 IPR036388 AL539_02830 AL539_02835 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_02835 IPR003660 HAMP linker domain AL539_02835 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain AL539_02835 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AL539_02835 IPR036097 AL539_02835 AL539_02835 IPR036890 AL539_02835 AL539_02845 IPR000829 Diacylglycerol kinase, prokaryotic AL539_02845 IPR036945 AL539_02845 AL539_02850 IPR000917 Sulfatase AL539_02850 IPR012549 Domain of unknown function DUF1705 AL539_02850 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha AL539_02850 IPR017850 Alkaline-phosphatase-like, core domain AL539_02855 IPR000683 Oxidoreductase, N-terminal AL539_02855 IPR036291 AL539_02855 AL539_02860 IPR005185 Protein of unknown function DUF307 AL539_02860 IPR031308 AL539_02860 AL539_02870 IPR002641 Patatin/Phospholipase A2-related AL539_02870 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AL539_02875 IPR003829 Pirin, N-terminal domain AL539_02875 IPR008778 Pirin, C-terminal domain AL539_02875 IPR011051 RmlC-like cupin domain AL539_02875 IPR012093 Pirin AL539_02875 IPR014710 RmlC-like jelly roll fold AL539_02880 IPR002059 Cold-shock protein, DNA-binding AL539_02880 IPR011129 Cold shock protein AL539_02880 IPR012156 Cold shock, CspA AL539_02880 IPR012340 Nucleic acid-binding, OB-fold AL539_02895 IPR001365 Adenosine/AMP deaminase domain AL539_02895 IPR006330 Adenosine/adenine deaminase AL539_02895 IPR028892 Adenine deaminase type 2 AL539_02895 IPR032466 AL539_02895 AL539_02900 IPR013740 Redoxin AL539_02900 IPR036249 AL539_02900 AL539_02905 IPR007730 Sporulation-related domain AL539_02905 IPR036680 AL539_02905 AL539_02910 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal AL539_02910 IPR012338 Beta-lactamase/transpeptidase-like AL539_02910 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal AL539_02910 IPR015956 Penicillin-binding protein-associated AL539_02910 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A AL539_02910 IPR037167 AL539_02910 AL539_02920 IPR004045 Glutathione S-transferase, N-terminal AL539_02920 IPR036249 AL539_02920 AL539_02920 IPR036282 AL539_02920 AL539_02930 IPR001362 Glycoside hydrolase, family 32 AL539_02930 IPR006232 Sucrose-6-phosphate hydrolase AL539_02930 IPR013148 Glycosyl hydrolase family 32, N-terminal AL539_02930 IPR013189 Glycosyl hydrolase family 32, C-terminal AL539_02930 IPR013320 Concanavalin A-like lectin/glucanase, subgroup AL539_02930 IPR018053 Glycoside hydrolase, family 32, active site AL539_02930 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain AL539_02935 IPR002139 Ribokinase AL539_02935 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site AL539_02935 IPR011611 Carbohydrate kinase PfkB AL539_02935 IPR029056 Ribokinase-like AL539_02940 IPR001996 Phosphotransferase system, IIB component, type 1 AL539_02940 IPR003352 Phosphotransferase system, EIIC AL539_02940 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component AL539_02940 IPR010973 Phosphotransferase system, sucrose-specific IIBC component AL539_02940 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site AL539_02940 IPR036878 AL539_02940 AL539_02945 IPR000843 Transcription regulator HTH, LacI AL539_02945 IPR010982 Lambda repressor-like, DNA-binding domain AL539_02945 IPR028082 Periplasmic binding protein-like I AL539_02950 IPR003192 Porin, LamB type AL539_02950 IPR021570 LamB-type porin N-terminal domain AL539_02950 IPR036998 AL539_02950 AL539_02965 IPR002347 Glucose/ribitol dehydrogenase AL539_02965 IPR020904 Short-chain dehydrogenase/reductase, conserved site AL539_02965 IPR036291 AL539_02965 AL539_02970 IPR001626 ABC-3 AL539_02970 IPR037294 AL539_02970 AL539_02975 IPR006127 Periplasmic solute binding protein family AL539_02975 IPR018228 Deoxyribonuclease, TatD-related, conserved site AL539_02980 IPR023614 Porin domain AL539_02985 IPR011051 RmlC-like cupin domain AL539_02985 IPR014710 RmlC-like jelly roll fold AL539_02985 IPR025979 ChrR-like cupin domain AL539_02990 IPR007420 Protein of unknown function DUF465 AL539_02995 IPR002347 Glucose/ribitol dehydrogenase AL539_02995 IPR020904 Short-chain dehydrogenase/reductase, conserved site AL539_02995 IPR036291 AL539_02995 AL539_03000 IPR000847 Transcription regulator HTH, LysR AL539_03000 IPR005119 LysR, substrate-binding AL539_03000 IPR036388 AL539_03000 AL539_03000 IPR036390 AL539_03000 AL539_03005 IPR009057 Homeodomain-like AL539_03005 IPR010499 Bacterial transcription activator, effector binding AL539_03005 IPR011256 Regulatory factor, effector binding domain AL539_03005 IPR018060 DNA binding HTH domain, AraC-type AL539_03005 IPR018062 HTH domain AraC-type, conserved site AL539_03005 IPR020449 Transcription regulator HTH, AraC- type AL539_03005 IPR029442 GyrI-like small molecule binding domain AL539_03010 IPR004839 Aminotransferase, class I/classII AL539_03010 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 AL539_03010 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 AL539_03010 IPR015424 Pyridoxal phosphate-dependent transferase AL539_03025 IPR025294 Protein of unknown function DUF4156 AL539_03040 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site AL539_03040 IPR001650 Helicase, C-terminal AL539_03040 IPR011545 DEAD/DEAH box helicase domain AL539_03040 IPR014001 Helicase, superfamily 1/2, ATP-binding domain AL539_03040 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_03040 IPR028622 ATP-dependent RNA helicase RhlE AL539_03045 IPR008928 Six-hairpin glycosidase-like AL539_03045 IPR012341 Six-hairpin glycosidase AL539_03045 IPR035396 AL539_03045 AL539_03050 IPR000847 Transcription regulator HTH, LysR AL539_03050 IPR005119 LysR, substrate-binding AL539_03050 IPR036388 AL539_03050 AL539_03050 IPR036390 AL539_03050 AL539_03055 IPR000847 Transcription regulator HTH, LysR AL539_03055 IPR005119 LysR, substrate-binding AL539_03055 IPR036388 AL539_03055 AL539_03055 IPR036390 AL539_03055 AL539_03060 IPR004045 Glutathione S-transferase, N-terminal AL539_03060 IPR007494 Glutaredoxin 2, C-terminal AL539_03060 IPR011901 Glutaredoxin, GrxB AL539_03060 IPR036249 AL539_03060 AL539_03060 IPR036282 AL539_03060 AL539_03065 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal AL539_03065 IPR013785 Aldolase-type TIM barrel AL539_03070 IPR011032 GroES (chaperonin 10)-like AL539_03070 IPR013149 Alcohol dehydrogenase, C-terminal AL539_03070 IPR013154 Alcohol dehydrogenase GroES-like AL539_03070 IPR020843 Polyketide synthase, enoylreductase AL539_03070 IPR036291 AL539_03070 AL539_03075 IPR011051 RmlC-like cupin domain AL539_03075 IPR014710 RmlC-like jelly roll fold AL539_03075 IPR025979 ChrR-like cupin domain AL539_03080 IPR002347 Glucose/ribitol dehydrogenase AL539_03080 IPR020904 Short-chain dehydrogenase/reductase, conserved site AL539_03080 IPR036291 AL539_03080 AL539_03085 IPR009057 Homeodomain-like AL539_03085 IPR018060 DNA binding HTH domain, AraC-type AL539_03085 IPR020449 Transcription regulator HTH, AraC- type AL539_03085 IPR032687 AL539_03085 AL539_03095 IPR000587 Creatinase, N-terminal AL539_03095 IPR000994 Peptidase M24, structural domain AL539_03095 IPR014335 Ectoine utilization protein EutD AL539_03095 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal AL539_03095 IPR036005 AL539_03095 AL539_03100 IPR007036 Succinylglutamate desuccinylase/aspartoacylase AL539_03100 IPR014336 N-alpha-acetyl diaminobutyrate deacetylase DoeB AL539_03105 IPR000485 AsnC-type HTH domain AL539_03105 IPR011008 Dimeric alpha-beta barrel AL539_03105 IPR019887 Transcription regulator AsnC-type, C-terminal AL539_03105 IPR019888 Transcription regulator AsnC-type AL539_03105 IPR036388 AL539_03105 AL539_03105 IPR036390 AL539_03105 AL539_03110 IPR015590 Aldehyde dehydrogenase domain AL539_03110 IPR016160 Aldehyde dehydrogenase, cysteine active site AL539_03110 IPR016161 Aldehyde/histidinol dehydrogenase AL539_03110 IPR016162 Aldehyde dehydrogenase, N-terminal AL539_03110 IPR016163 Aldehyde dehydrogenase, C-terminal AL539_03110 IPR029510 Aldehyde dehydrogenase, glutamic acid active site AL539_03115 IPR005814 Aminotransferase class-III AL539_03115 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 AL539_03115 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 AL539_03115 IPR015424 Pyridoxal phosphate-dependent transferase AL539_03120 IPR018636 Protein of unknown function DUF2058 AL539_03125 IPR001123 Lysine-type exporter protein (LYSE/YGGA) AL539_03130 IPR022253 Ribosome recycling factor. bacterial AL539_03135 IPR000847 Transcription regulator HTH, LysR AL539_03135 IPR005119 LysR, substrate-binding AL539_03135 IPR036388 AL539_03135 AL539_03135 IPR036390 AL539_03135 AL539_03140 IPR001114 Adenylosuccinate synthetase AL539_03140 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_03145 IPR004550 L-asparaginase, type II AL539_03145 IPR006034 Asparaginase/glutaminase AL539_03145 IPR020827 Asparaginase/glutaminase, active site 1 AL539_03145 IPR027473 L-asparaginase, C-terminal domain AL539_03145 IPR027474 L-asparaginase, N-terminal AL539_03145 IPR027475 Asparaginase/glutaminase, active site 2 AL539_03145 IPR036152 AL539_03145 AL539_03145 IPR037152 AL539_03145 AL539_03150 IPR005177 Bifunctional kinase-pyrophosphorylase AL539_03150 IPR026530 Phosphoenolpyruvate synthase regulatory protein AL539_03155 IPR000121 PEP-utilising enzyme, C-terminal AL539_03155 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding AL539_03155 IPR006319 Phosphoenolpyruvate synthase AL539_03155 IPR008279 PEP-utilising enzyme, mobile domain AL539_03155 IPR013815 ATP-grasp fold, subdomain 1 AL539_03155 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain AL539_03155 IPR018274 PEP-utilising enzyme, active site AL539_03155 IPR023151 PEP-utilising enzyme, conserved site AL539_03155 IPR036637 AL539_03155 AL539_03165 IPR000792 Transcription regulator LuxR, C-terminal AL539_03165 IPR016032 Signal transduction response regulator, C-terminal effector AL539_03165 IPR036388 AL539_03165 AL539_03170 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site AL539_03170 IPR002305 Aminoacyl-tRNA synthetase, class Ic AL539_03170 IPR002307 Tyrosine-tRNA ligase AL539_03170 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL539_03170 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 AL539_03170 IPR036986 AL539_03170 AL539_03175 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein AL539_03175 IPR006059 Bacterial extracellular solute-binding, family 1 AL539_03190 IPR008979 Galactose-binding domain-like AL539_03190 IPR013783 Immunoglobulin-like fold AL539_03190 IPR017853 Glycoside hydrolase, superfamily AL539_03190 IPR036156 AL539_03190 AL539_03195 IPR000060 BCCT transporter family AL539_03200 IPR000524 Transcription regulator HTH, GntR AL539_03200 IPR011663 UbiC transcription regulator-associated AL539_03200 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AL539_03200 IPR036388 AL539_03200 AL539_03200 IPR036390 AL539_03200 AL539_03210 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase AL539_03210 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha AL539_03210 IPR017850 Alkaline-phosphatase-like, core domain AL539_03215 IPR000515 MetI-like domain AL539_03215 IPR035906 AL539_03215 AL539_03220 IPR000515 MetI-like domain AL539_03220 IPR035906 AL539_03220 AL539_03225 IPR003439 ABC transporter-like AL539_03225 IPR003593 AAA+ ATPase domain AL539_03225 IPR008995 Molybdate/tungstate binding, C-terminal AL539_03225 IPR013611 Transport-associated OB, type 2 AL539_03225 IPR017871 ABC transporter, conserved site AL539_03225 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_03230 IPR006385 HAD-superfamily hydrolase, subfamily IB, PSPase-like, bacterial AL539_03230 IPR023214 HAD-like domain AL539_03230 IPR036412 AL539_03230 AL539_03235 IPR001647 DNA-binding HTH domain, TetR-type AL539_03235 IPR009057 Homeodomain-like AL539_03235 IPR036271 AL539_03235 AL539_03245 IPR001036 Acriflavin resistance protein AL539_03245 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL539_03265 IPR001036 Acriflavin resistance protein AL539_03265 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL539_03270 IPR006143 RND efflux pump, membrane fusion protein AL539_03270 IPR039562 AL539_03270 AL539_03275 IPR001736 Phospholipase D/Transphosphatidylase AL539_03275 IPR025202 Phospholipase D-like domain AL539_03280 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like AL539_03285 IPR007374 ASCH domain AL539_03285 IPR009326 Protein of unknown function DUF984 AL539_03285 IPR015947 PUA-like domain AL539_03290 IPR011990 Tetratricopeptide-like helical domain AL539_03290 IPR019734 Tetratricopeptide repeat AL539_03295 IPR024464 Protein of unknown function DUF2391 AL539_03300 IPR000551 MerR-type HTH domain AL539_03300 IPR009061 DNA binding domain, putative AL539_03300 IPR010211 Redox-sensitive transcriptional activator SoxR AL539_03300 IPR015358 Transcription regulator MerR, DNA binding AL539_03305 IPR011701 Major facilitator superfamily AL539_03305 IPR036259 AL539_03305 AL539_03315 IPR000847 Transcription regulator HTH, LysR AL539_03315 IPR005119 LysR, substrate-binding AL539_03315 IPR036388 AL539_03315 AL539_03315 IPR036390 AL539_03315 AL539_03320 IPR011669 Protein of unknown function DUF1611 AL539_03320 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_03320 IPR035086 AL539_03320 AL539_03320 IPR035402 AL539_03320 AL539_03325 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain AL539_03325 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal AL539_03325 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site AL539_03325 IPR029017 Enolase N-terminal domain-like AL539_03325 IPR029065 Enolase C-terminal domain-like AL539_03325 IPR036849 AL539_03325 AL539_03335 IPR000640 Translation elongation factor EFG, V domain AL539_03335 IPR000795 Elongation factor, GTP-binding domain AL539_03335 IPR005225 Small GTP-binding protein domain AL539_03335 IPR005517 Translation elongation factor EFG/EF2, domain IV AL539_03335 IPR009000 Translation protein, beta-barrel domain AL539_03335 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AL539_03335 IPR020568 Ribosomal protein S5 domain 2-type fold AL539_03335 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_03335 IPR035647 AL539_03335 AL539_03345 IPR002575 Aminoglycoside phosphotransferase AL539_03345 IPR011009 Protein kinase-like domain AL539_03350 IPR007495 Protein of unknown function DUF539 AL539_03355 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis AL539_03355 IPR036105 AL539_03355 AL539_03360 IPR002852 Uncharacterised protein family UPF0251 AL539_03360 IPR013324 RNA polymerase sigma factor, region 3/4 AL539_03360 IPR036388 AL539_03360 AL539_03370 IPR000515 MetI-like domain AL539_03370 IPR035906 AL539_03370 AL539_03375 IPR003439 ABC transporter-like AL539_03375 IPR003593 AAA+ ATPase domain AL539_03375 IPR005892 Glycine betaine transport ATP-binding subunit AL539_03375 IPR017871 ABC transporter, conserved site AL539_03375 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_03380 IPR007298 Copper resistance lipoprotein NlpE AL539_03385 IPR010583 MltA-interacting MipA AL539_03390 IPR000914 Bacterial extracellular solute-binding protein, family 5 AL539_03390 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain AL539_03395 IPR000498 Outer membrane protein, OmpA-like, transmembrane domain AL539_03395 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel AL539_03400 IPR000847 Transcription regulator HTH, LysR AL539_03400 IPR005119 LysR, substrate-binding AL539_03400 IPR036388 AL539_03400 AL539_03400 IPR036390 AL539_03400 AL539_03405 IPR000620 Drug/metabolite transporter AL539_03410 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like AL539_03415 IPR008816 Glycine zipper 2TM domain AL539_03425 IPR006406 Nicotinate phosphoribosyltransferase AL539_03425 IPR007229 Nicotinate phosphoribosyltransferase family AL539_03425 IPR036068 AL539_03425 AL539_03430 IPR000086 NUDIX hydrolase domain AL539_03430 IPR015797 NUDIX hydrolase domain-like AL539_03435 IPR000868 Isochorismatase-like AL539_03435 IPR036380 AL539_03435 AL539_03440 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AL539_03440 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL539_03445 IPR000620 Drug/metabolite transporter AL539_03450 IPR001034 HTH DeoR N-terminal domain AL539_03450 IPR014036 DeoR C-terminal sensor domain AL539_03450 IPR018356 Transcription regulator, HTH DeoR-type, conserved site AL539_03450 IPR036388 AL539_03450 AL539_03450 IPR036390 AL539_03450 AL539_03450 IPR037171 AL539_03450 AL539_03455 IPR002569 Peptide methionine sulphoxide reductase MsrA AL539_03455 IPR036509 AL539_03455 AL539_03460 IPR004136 2-nitropropane dioxygenase, NPD AL539_03460 IPR013785 Aldolase-type TIM barrel AL539_03465 IPR002293 Amino acid/polyamine transporter I AL539_03465 IPR004757 Ethanolamine permease AL539_03470 IPR009246 Ethanolamine ammonia-lyase light chain AL539_03475 IPR010628 Ethanolamine ammonia lyase large subunit AL539_03475 IPR013785 Aldolase-type TIM barrel AL539_03480 IPR009057 Homeodomain-like AL539_03480 IPR018060 DNA binding HTH domain, AraC-type AL539_03480 IPR018062 HTH domain AraC-type, conserved site AL539_03480 IPR020449 Transcription regulator HTH, AraC- type AL539_03485 IPR001647 DNA-binding HTH domain, TetR-type AL539_03485 IPR009057 Homeodomain-like AL539_03485 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AL539_03495 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AL539_03495 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL539_03500 IPR000847 Transcription regulator HTH, LysR AL539_03500 IPR005119 LysR, substrate-binding AL539_03500 IPR036388 AL539_03500 AL539_03500 IPR036390 AL539_03500 AL539_03505 IPR001123 Lysine-type exporter protein (LYSE/YGGA) AL539_03515 IPR001844 Chaperonin Cpn60 AL539_03515 IPR002423 Chaperonin Cpn60/TCP-1 AL539_03515 IPR018370 Chaperonin Cpn60, conserved site AL539_03515 IPR027409 GroEL-like apical domain AL539_03515 IPR027410 TCP-1-like chaperonin intermediate domain AL539_03515 IPR027413 GroEL-like equatorial domain AL539_03520 IPR011032 GroES (chaperonin 10)-like AL539_03520 IPR018369 Chaperonin Cpn10, conserved site AL539_03520 IPR020818 Chaperonin Cpn10 AL539_03520 IPR037124 AL539_03520 AL539_03525 IPR001763 Rhodanese-like domain AL539_03525 IPR036873 AL539_03525 AL539_03530 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V AL539_03530 IPR011057 Mss4-like AL539_03535 IPR021379 Protein of unknown function DUF3012 AL539_03540 IPR000262 FMN-dependent dehydrogenase AL539_03540 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent AL539_03540 IPR013785 Aldolase-type TIM barrel AL539_03545 IPR003148 Regulator of K+ conductance, N-terminal AL539_03545 IPR006153 Cation/H+ exchanger AL539_03545 IPR036291 AL539_03545 AL539_03545 IPR038770 AL539_03545 AL539_03550 IPR014600 Uncharacterised conserved protein UCP035905, membrane protein AL539_03550 IPR019286 Protein of unknown function DUF2339, transmembrane AL539_03560 IPR001029 Flagellin, D0/D1 domain AL539_03560 IPR013384 Flagellar hook-associated protein 3 AL539_03565 IPR001444 Flagellar basal body rod protein, N-terminal AL539_03565 IPR002371 Flagellar hook-associated protein, FlgK AL539_03565 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AL539_03570 IPR019301 Flagellar protein FlgJ, N-terminal AL539_03575 IPR001782 Flagellar P-ring protein AL539_03580 IPR000527 Flagellar L-ring protein AL539_03585 IPR001444 Flagellar basal body rod protein, N-terminal AL539_03585 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AL539_03585 IPR012834 Flagellar basal-body rod FlgG AL539_03585 IPR019776 Flagellar basal body rod protein, conserved site AL539_03585 IPR020013 Fagellar hook-basal body protein, FlgE/F/G AL539_03585 IPR037925 AL539_03585 AL539_03590 IPR001444 Flagellar basal body rod protein, N-terminal AL539_03590 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AL539_03590 IPR012836 Flagellar basal-body rod FlgF AL539_03590 IPR020013 Fagellar hook-basal body protein, FlgE/F/G AL539_03590 IPR037925 AL539_03590 AL539_03595 IPR001444 Flagellar basal body rod protein, N-terminal AL539_03595 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AL539_03595 IPR011491 Flagellar basal body FlaE AL539_03595 IPR020013 Fagellar hook-basal body protein, FlgE/F/G AL539_03595 IPR037058 AL539_03595 AL539_03595 IPR037925 AL539_03595 AL539_03600 IPR005648 Flagellar hook capping protein AL539_03600 IPR025963 FlgD Tudor-like domain AL539_03600 IPR025965 FlgD Ig-like domain AL539_03605 IPR001444 Flagellar basal body rod protein, N-terminal AL539_03605 IPR006299 Flagellar basal-body rod protein FlgC AL539_03605 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AL539_03610 IPR001444 Flagellar basal body rod protein, N-terminal AL539_03610 IPR006300 Flagellar basal-body rod protein FlgB AL539_03610 IPR019776 Flagellar basal body rod protein, conserved site AL539_03615 IPR013974 SAF domain AL539_03615 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal AL539_03620 IPR007412 Anti-sigma-28 factor, FlgM AL539_03620 IPR031316 AL539_03620 AL539_03620 IPR035890 AL539_03620 AL539_03625 IPR007809 FlgN-like domain AL539_03625 IPR036679 AL539_03625 AL539_03630 IPR000189 Prokaryotic transglycosylase, active site AL539_03630 IPR008258 Lytic transglycosylase-like SLT domain AL539_03630 IPR023346 Lysozyme-like domain AL539_03635 IPR000086 NUDIX hydrolase domain AL539_03635 IPR015797 NUDIX hydrolase domain-like AL539_03635 IPR020084 NUDIX hydrolase, conserved site AL539_03640 IPR005590 Protein of unknown function DUF333 AL539_03650 IPR003848 Domain of unknown function DUF218 AL539_03655 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form AL539_03655 IPR005130 Serine dehydratase-like, alpha subunit AL539_03655 IPR005131 Serine dehydratase beta chain AL539_03655 IPR029009 Allosteric substrate binding domain AL539_03665 IPR000847 Transcription regulator HTH, LysR AL539_03665 IPR005119 LysR, substrate-binding AL539_03665 IPR036388 AL539_03665 AL539_03665 IPR036390 AL539_03665 AL539_03670 IPR000847 Transcription regulator HTH, LysR AL539_03670 IPR005119 LysR, substrate-binding AL539_03670 IPR036388 AL539_03670 AL539_03670 IPR036390 AL539_03670 AL539_03675 IPR000498 Outer membrane protein, OmpA-like, transmembrane domain AL539_03675 IPR006664 Outer membrane protein, bacterial AL539_03675 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal AL539_03675 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel AL539_03675 IPR036737 AL539_03675 AL539_03680 IPR000834 Peptidase M14, carboxypeptidase A AL539_03685 IPR006076 FAD dependent oxidoreductase AL539_03685 IPR017715 Putative aminophosphonate oxidoreductase AL539_03685 IPR036188 AL539_03685 AL539_03690 IPR016879 Uncharacterised conserved protein UCP028299 AL539_03695 IPR007488 Protein of unknown function DUF535 AL539_03700 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel AL539_03700 IPR027385 Outer membrane protein beta-barrel AL539_03705 IPR000620 Drug/metabolite transporter AL539_03705 IPR017725 Phosphonate utilization associated transmembrane protein, putative AL539_03710 IPR000524 Transcription regulator HTH, GntR AL539_03710 IPR011663 UbiC transcription regulator-associated AL539_03710 IPR017722 Transcription regulator PhnR AL539_03710 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AL539_03710 IPR036388 AL539_03710 AL539_03710 IPR036390 AL539_03710 AL539_03715 IPR000515 MetI-like domain AL539_03715 IPR017664 2-aminoethylphosphonate ABC transport system, permease protein, putative AL539_03715 IPR035906 AL539_03715 AL539_03720 IPR003439 ABC transporter-like AL539_03720 IPR003593 AAA+ ATPase domain AL539_03720 IPR008995 Molybdate/tungstate binding, C-terminal AL539_03720 IPR013611 Transport-associated OB, type 2 AL539_03720 IPR017666 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT2 AL539_03720 IPR017871 ABC transporter, conserved site AL539_03720 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_03725 IPR017663 ABC transport system, 1-aminoethylphosphonate-binding protein, putative AL539_03725 IPR026045 Ferric binding protein AL539_03730 IPR000192 Aminotransferase class V domain AL539_03730 IPR012703 2-aminoethylphosphonate--pyruvate transaminase AL539_03730 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 AL539_03730 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 AL539_03730 IPR015424 Pyridoxal phosphate-dependent transferase AL539_03730 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase AL539_03735 IPR005814 Aminotransferase class-III AL539_03735 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 AL539_03735 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 AL539_03735 IPR015424 Pyridoxal phosphate-dependent transferase AL539_03740 IPR006323 Phosphonoacetaldehyde hydrolase AL539_03740 IPR006439 HAD hydrolase, subfamily IA AL539_03740 IPR023198 Phosphoglycolate phosphatase, domain 2 AL539_03740 IPR023214 HAD-like domain AL539_03740 IPR036412 AL539_03740 AL539_03750 IPR000209 Peptidase S8/S53 domain AL539_03750 IPR002884 Proprotein convertase, P AL539_03750 IPR003137 Protease-associated domain, PA AL539_03750 IPR008979 Galactose-binding domain-like AL539_03750 IPR010259 Proteinase inhibitor I9 AL539_03750 IPR015500 Peptidase S8, subtilisin-related AL539_03750 IPR022398 Peptidase S8, subtilisin, His-active site AL539_03750 IPR023828 Peptidase S8, subtilisin, Ser-active site AL539_03750 IPR036852 AL539_03750 AL539_03750 IPR037045 AL539_03750 AL539_03755 IPR001087 Lipase, GDSL AL539_03755 IPR008265 Lipase, GDSL, active site AL539_03755 IPR036514 AL539_03755 AL539_03760 IPR001647 DNA-binding HTH domain, TetR-type AL539_03760 IPR009057 Homeodomain-like AL539_03760 IPR036271 AL539_03760 AL539_03765 IPR029032 AhpD-like AL539_03770 IPR003423 Outer membrane efflux protein AL539_03770 IPR010131 RND efflux system, outer membrane lipoprotein, NodT AL539_03775 IPR003439 ABC transporter-like AL539_03775 IPR003593 AAA+ ATPase domain AL539_03775 IPR003838 Permease FtsX-like AL539_03775 IPR017871 ABC transporter, conserved site AL539_03775 IPR025857 MacB-like periplasmic core domain AL539_03775 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_03785 IPR025668 Transposase DDE domain AL539_03795 IPR005017 Membrane protein, aromatic hydrocarbon degradation AL539_03800 IPR001148 Alpha carbonic anhydrase AL539_03800 IPR018338 Carbonic anhydrase, alpha-class, conserved site AL539_03800 IPR036398 AL539_03800 AL539_03805 IPR006513 Conserved hypothetical protein CHP01626, YtfJ AL539_03815 IPR000086 NUDIX hydrolase domain AL539_03815 IPR015797 NUDIX hydrolase domain-like AL539_03820 IPR006439 HAD hydrolase, subfamily IA AL539_03820 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB AL539_03820 IPR023198 Phosphoglycolate phosphatase, domain 2 AL539_03820 IPR023214 HAD-like domain AL539_03820 IPR036412 AL539_03820 AL539_03825 IPR000847 Transcription regulator HTH, LysR AL539_03825 IPR005119 LysR, substrate-binding AL539_03825 IPR036388 AL539_03825 AL539_03825 IPR036390 AL539_03825 AL539_03830 IPR011008 Dimeric alpha-beta barrel AL539_03835 IPR013196 Helix-turn-helix, type 11 AL539_03835 IPR026881 WYL domain AL539_03835 IPR036388 AL539_03835 AL539_03835 IPR036390 AL539_03835 AL539_03860 IPR001451 Bacterial transferase hexapeptide repeat AL539_03860 IPR011004 Trimeric LpxA-like AL539_03860 IPR018357 Hexapeptide transferase, conserved site AL539_03860 IPR024688 Maltose/galactoside acetyltransferase AL539_03865 IPR003718 OsmC/Ohr family AL539_03865 IPR015946 K homology domain-like, alpha/beta AL539_03865 IPR036102 AL539_03865 AL539_03870 IPR002569 Peptide methionine sulphoxide reductase MsrA AL539_03870 IPR002579 Peptide methionine sulphoxide reductase MrsB AL539_03870 IPR011057 Mss4-like AL539_03870 IPR036509 AL539_03870 AL539_03875 IPR017136 Uncharacterised conserved protein UCP037205 AL539_03880 IPR002347 Glucose/ribitol dehydrogenase AL539_03880 IPR036291 AL539_03880 AL539_03885 IPR007357 Deoxyribodipyrimidine photolyase-related protein AL539_03885 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL539_03885 IPR036134 AL539_03885 AL539_03890 IPR002081 Cryptochrome/DNA photolyase, class 1 AL539_03890 IPR005101 DNA photolyase, FAD-binding/Cryptochrome, C-terminal AL539_03890 IPR006050 DNA photolyase, N-terminal AL539_03890 IPR014133 Cryptochrome, DASH AL539_03890 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL539_03890 IPR036134 AL539_03890 AL539_03890 IPR036155 AL539_03890 AL539_03895 IPR000160 GGDEF domain AL539_03895 IPR029787 Nucleotide cyclase AL539_03900 IPR011076 Malate synthase-like AL539_03900 IPR023310 Malate synthase G, beta sub-domain AL539_03905 IPR001387 Cro/C1-type helix-turn-helix domain AL539_03905 IPR010359 Protein of unknown function DUF955 AL539_03905 IPR010982 Lambda repressor-like, DNA-binding domain AL539_03905 IPR022055 Protein of unknown function DUF3612 AL539_03910 IPR000160 GGDEF domain AL539_03910 IPR006189 CHASE AL539_03910 IPR029787 Nucleotide cyclase AL539_03915 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like AL539_03915 IPR037151 AL539_03915 AL539_03920 IPR021928 Protein of unknown function DUF3541 AL539_03925 IPR002668 Concentrative nucleoside transporter N-terminal domain AL539_03925 IPR011642 Nucleoside recognition Gate AL539_03925 IPR011657 Concentrative nucleoside transporter C-terminal domain AL539_03925 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial AL539_03940 IPR021316 Protein of unknown function DUF2913 AL539_03945 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase AL539_03945 IPR011166 Beta-eliminating lyase family AL539_03945 IPR013440 Tryptophanase AL539_03945 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 AL539_03945 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 AL539_03945 IPR015424 Pyridoxal phosphate-dependent transferase AL539_03945 IPR018176 Tryptophanase, conserved site AL539_03950 IPR004338 NADH-quinone reductase NQR2/RnfD AL539_03950 IPR010966 NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit AL539_03955 IPR002585 Cytochrome d ubiquinol oxidase, subunit I AL539_03960 IPR003317 Cytochrome d ubiquinol oxidase, subunit II AL539_03965 IPR018895 Protein of unknown function DUF2474 AL539_03975 IPR006076 FAD dependent oxidoreductase AL539_03975 IPR036188 AL539_03975 AL539_03980 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit AL539_03980 IPR011853 TRAP transporter, 4TM/12TM fusion protein AL539_03985 IPR011852 TRAP transporter solute receptor, TAXI family AL539_03995 IPR004685 Branched-chain amino acid transport system II carrier protein AL539_04000 IPR000160 GGDEF domain AL539_04000 IPR029787 Nucleotide cyclase AL539_04005 IPR001789 Signal transduction response regulator, receiver domain AL539_04005 IPR002078 RNA polymerase sigma factor 54 interaction domain AL539_04005 IPR002197 DNA binding HTH domain, Fis-type AL539_04005 IPR003593 AAA+ ATPase domain AL539_04005 IPR009057 Homeodomain-like AL539_04005 IPR011006 CheY-like superfamily AL539_04005 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AL539_04005 IPR025944 Sigma-54 interaction domain, conserved site AL539_04005 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_04010 IPR000014 PAS domain AL539_04010 IPR001610 PAC motif AL539_04010 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_04010 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AL539_04010 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) AL539_04010 IPR035965 AL539_04010 AL539_04010 IPR036097 AL539_04010 AL539_04010 IPR036890 AL539_04010 AL539_04015 IPR001360 Glycoside hydrolase, family 1 AL539_04015 IPR017853 Glycoside hydrolase, superfamily AL539_04015 IPR018120 Glycoside hydrolase, family 1, active site AL539_04015 IPR033132 AL539_04015 AL539_04020 IPR008557 Protein of unknown function DUF839 AL539_04025 IPR007416 Protein of unknown function DUF469 AL539_04030 IPR000847 Transcription regulator HTH, LysR AL539_04030 IPR005119 LysR, substrate-binding AL539_04030 IPR036388 AL539_04030 AL539_04030 IPR036390 AL539_04030 AL539_04035 IPR035242 AL539_04035 AL539_04040 IPR001279 Beta-lactamase-like AL539_04040 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D AL539_04040 IPR036866 AL539_04040 AL539_04045 IPR001647 DNA-binding HTH domain, TetR-type AL539_04045 IPR009057 Homeodomain-like AL539_04045 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AL539_04045 IPR039536 AL539_04045 AL539_04055 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX AL539_04055 IPR013651 ATP-grasp fold, RimK-type AL539_04055 IPR013815 ATP-grasp fold, subdomain 1 AL539_04055 IPR023533 Ribosomal S6 modification enzyme RimK AL539_04060 IPR021109 Aspartic peptidase domain AL539_04065 IPR001279 Beta-lactamase-like AL539_04065 IPR036866 AL539_04065 AL539_04070 IPR000183 Ornithine/DAP/Arg decarboxylase AL539_04070 IPR002985 Arginine decarboxylase AL539_04070 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal AL539_04070 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal AL539_04070 IPR029066 PLP-binding barrel AL539_04075 IPR005925 Agmatinase-related AL539_04075 IPR006035 Ureohydrolase AL539_04075 IPR020855 Ureohydrolase, manganese-binding site AL539_04075 IPR023696 Ureohydrolase domain AL539_04080 IPR011701 Major facilitator superfamily AL539_04080 IPR036259 AL539_04080 AL539_04085 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain AL539_04085 IPR002470 Peptidase S9A, prolyl oligopeptidase AL539_04085 IPR023302 Peptidase S9A, N-terminal domain AL539_04085 IPR029058 Alpha/Beta hydrolase fold AL539_04090 IPR023614 Porin domain AL539_04100 IPR001626 ABC-3 AL539_04100 IPR037294 AL539_04100 AL539_04105 IPR003439 ABC transporter-like AL539_04105 IPR003593 AAA+ ATPase domain AL539_04105 IPR017871 ABC transporter, conserved site AL539_04105 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_04110 IPR006127 Periplasmic solute binding protein family AL539_04110 IPR006128 Adhesion lipoprotein AL539_04110 IPR006129 Adhesin B AL539_04125 IPR019613 Protein of unknown function DUF4198 AL539_04130 IPR014469 Protein of unknown function DUF2271 AL539_04135 IPR032307 AL539_04135 AL539_04140 IPR011990 Tetratricopeptide-like helical domain AL539_04145 IPR003538 Gram-negative bacterial TonB protein AL539_04145 IPR006260 TonB, C-terminal AL539_04145 IPR037682 AL539_04145 AL539_04150 IPR003400 Biopolymer transport protein ExbD/TolR AL539_04155 IPR002898 MotA/TolQ/ExbB proton channel AL539_04160 IPR002898 MotA/TolQ/ExbB proton channel AL539_04160 IPR017270 Outer membrane stability protein, TolR AL539_04165 IPR016866 Uncharacterised conserved protein UCP028069 AL539_04170 IPR000531 TonB-dependent receptor, beta-barrel AL539_04170 IPR010105 TonB-dependent siderophore receptor AL539_04170 IPR012910 TonB-dependent receptor, plug AL539_04170 IPR036942 AL539_04170 AL539_04170 IPR037066 AL539_04170 AL539_04175 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_04175 IPR003660 HAMP linker domain AL539_04175 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain AL539_04175 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AL539_04175 IPR031930 AL539_04175 AL539_04175 IPR036097 AL539_04175 AL539_04175 IPR036890 AL539_04175 AL539_04175 IPR038428 AL539_04175 AL539_04180 IPR001789 Signal transduction response regulator, receiver domain AL539_04180 IPR001867 Signal transduction response regulator, C-terminal AL539_04180 IPR011006 CheY-like superfamily AL539_04180 IPR016032 Signal transduction response regulator, C-terminal effector AL539_04180 IPR036388 AL539_04180 AL539_04185 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain AL539_04185 IPR030395 AL539_04185 AL539_04190 IPR005490 L,D-transpeptidase catalytic domain AL539_04190 IPR038063 AL539_04190 AL539_04195 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AL539_04195 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain AL539_04195 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 AL539_04195 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AL539_04195 IPR036291 AL539_04195 AL539_04200 IPR021230 Protein of unknown function DUF2810 AL539_04250 IPR021438 Protein of unknown function DUF3087 AL539_04255 IPR007158 tRNA (pseudouridine(54)-N(1))-methyltransferase, TrmY AL539_04255 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AL539_04255 IPR029028 Alpha/beta knot methyltransferases AL539_04260 IPR002510 TldD/PmbA AL539_04260 IPR035068 AL539_04260 AL539_04260 IPR036059 AL539_04260 AL539_04265 IPR002510 TldD/PmbA AL539_04265 IPR025502 TldD AL539_04265 IPR035068 AL539_04265 AL539_04265 IPR036059 AL539_04265 AL539_04270 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase AL539_04270 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase AL539_04270 IPR029056 Ribokinase-like AL539_04275 IPR003439 ABC transporter-like AL539_04275 IPR003593 AAA+ ATPase domain AL539_04275 IPR017871 ABC transporter, conserved site AL539_04275 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_04280 IPR000515 MetI-like domain AL539_04280 IPR035906 AL539_04280 AL539_04285 IPR015168 SsuA/THI5-like AL539_04290 IPR004305 Thiaminase-2/PQQC AL539_04290 IPR016084 Haem oxygenase-like, multi-helical AL539_04290 IPR027574 Thiaminase II AL539_04295 IPR000417 Hydroxyethylthiazole kinase AL539_04295 IPR029056 Ribokinase-like AL539_04300 IPR013785 Aldolase-type TIM barrel AL539_04300 IPR022998 Thiamin phosphate synthase superfamily AL539_04300 IPR034291 AL539_04300 AL539_04300 IPR036206 AL539_04300 AL539_04305 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AL539_04305 IPR036938 AL539_04305 AL539_04310 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site AL539_04310 IPR006656 Molybdopterin oxidoreductase AL539_04310 IPR006657 Molydopterin dinucleotide-binding domain AL539_04310 IPR006658 Molybdopterin guanine dinucleotide-containing S/N-oxide reductase AL539_04310 IPR009010 Aspartate decarboxylase-like domain AL539_04310 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AL539_04315 IPR005126 NapC/NirT cytochrome c, N-terminal AL539_04315 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK AL539_04315 IPR036280 AL539_04315 AL539_04315 IPR038266 AL539_04315 AL539_04320 IPR000182 GNAT domain AL539_04320 IPR016181 Acyl-CoA N-acyltransferase AL539_04325 IPR002347 Glucose/ribitol dehydrogenase AL539_04325 IPR036291 AL539_04325 AL539_04330 IPR000182 GNAT domain AL539_04330 IPR016181 Acyl-CoA N-acyltransferase AL539_04335 IPR023214 HAD-like domain AL539_04335 IPR036412 AL539_04335 AL539_04340 IPR000182 GNAT domain AL539_04340 IPR016181 Acyl-CoA N-acyltransferase AL539_04345 IPR012902 Prokaryotic N-terminal methylation site AL539_04355 IPR000620 Drug/metabolite transporter AL539_04360 IPR000524 Transcription regulator HTH, GntR AL539_04360 IPR004839 Aminotransferase, class I/classII AL539_04360 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 AL539_04360 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 AL539_04360 IPR015424 Pyridoxal phosphate-dependent transferase AL539_04360 IPR036388 AL539_04360 AL539_04360 IPR036390 AL539_04360 AL539_04365 IPR004381 Glycerate kinase AL539_04365 IPR018193 Glycerate kinase, flavodoxin-like domain AL539_04365 IPR018197 Glycerate kinase, restriction-enzyme-like fold AL539_04365 IPR036129 AL539_04365 AL539_04370 IPR003474 Gluconate transporter AL539_04375 IPR008599 Putative sugar diacid recognition AL539_04375 IPR009057 Homeodomain-like AL539_04375 IPR025736 PucR C-terminal helix-turn-helix domain AL539_04390 IPR001567 Peptidase M3A/M3B AL539_04390 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 AL539_04390 IPR024079 Metallopeptidase, catalytic domain AL539_04395 IPR010323 Protein of unknown function DUF924 AL539_04395 IPR011990 Tetratricopeptide-like helical domain AL539_04400 IPR025284 Protein of unknown function DUF4144 AL539_04405 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AL539_04405 IPR018146 Glyoxalase I, conserved site AL539_04405 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL539_04410 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AL539_04410 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL539_04415 IPR001279 Beta-lactamase-like AL539_04415 IPR036866 AL539_04415 AL539_04420 IPR009778 Modulator of Rho-dependent transcription termination AL539_04420 IPR023534 Rof/RNase P-like AL539_04420 IPR038626 AL539_04420 AL539_04425 IPR004638 Drug resistance transporter EmrB/QacA subfamily AL539_04425 IPR011701 Major facilitator superfamily AL539_04425 IPR036259 AL539_04425 AL539_04430 IPR032317 AL539_04430 AL539_04435 IPR005618 Outer membrane protein, OmpW AL539_04435 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel AL539_04440 IPR001646 Pentapeptide repeat AL539_04445 IPR011051 RmlC-like cupin domain AL539_04445 IPR013096 Cupin 2, conserved barrel AL539_04445 IPR014710 RmlC-like jelly roll fold AL539_04450 IPR006385 HAD-superfamily hydrolase, subfamily IB, PSPase-like, bacterial AL539_04450 IPR023214 HAD-like domain AL539_04450 IPR036412 AL539_04450 AL539_04455 IPR003610 Carbohydrate-binding module family 5/12 AL539_04455 IPR004302 Chitin-binding, domain 3 AL539_04455 IPR014756 Immunoglobulin E-set AL539_04455 IPR036573 AL539_04455 AL539_04460 IPR000485 AsnC-type HTH domain AL539_04460 IPR011008 Dimeric alpha-beta barrel AL539_04460 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AL539_04460 IPR019887 Transcription regulator AsnC-type, C-terminal AL539_04460 IPR019888 Transcription regulator AsnC-type AL539_04460 IPR036388 AL539_04460 AL539_04460 IPR036390 AL539_04460 AL539_04465 IPR001123 Lysine-type exporter protein (LYSE/YGGA) AL539_04470 IPR007037 Siderophore-interacting protein AL539_04470 IPR013113 FAD-binding 9, siderophore-interacting AL539_04470 IPR017938 Riboflavin synthase-like beta-barrel AL539_04470 IPR039261 AL539_04470 AL539_04475 IPR000847 Transcription regulator HTH, LysR AL539_04475 IPR005119 LysR, substrate-binding AL539_04475 IPR036388 AL539_04475 AL539_04475 IPR036390 AL539_04475 AL539_04480 IPR001447 Arylamine N-acetyltransferase AL539_04480 IPR038765 AL539_04480 AL539_04485 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site AL539_04485 IPR011032 GroES (chaperonin 10)-like AL539_04485 IPR013149 Alcohol dehydrogenase, C-terminal AL539_04485 IPR013154 Alcohol dehydrogenase GroES-like AL539_04485 IPR014183 Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase AL539_04485 IPR020843 Polyketide synthase, enoylreductase AL539_04485 IPR036291 AL539_04485 AL539_04490 IPR000801 Putative esterase AL539_04490 IPR014186 S-formylglutathione hydrolase AL539_04490 IPR029058 Alpha/Beta hydrolase fold AL539_04495 IPR036374 AL539_04495 AL539_04500 IPR000160 GGDEF domain AL539_04500 IPR029787 Nucleotide cyclase AL539_04510 IPR000150 Cof protein AL539_04510 IPR006379 HAD-superfamily hydrolase, subfamily IIB AL539_04510 IPR023214 HAD-like domain AL539_04510 IPR036412 AL539_04510 AL539_04515 IPR000847 Transcription regulator HTH, LysR AL539_04515 IPR005119 LysR, substrate-binding AL539_04515 IPR036388 AL539_04515 AL539_04515 IPR036390 AL539_04515 AL539_04520 IPR001279 Beta-lactamase-like AL539_04520 IPR036866 AL539_04520 AL539_04525 IPR001853 DSBA-like thioredoxin domain AL539_04525 IPR036249 AL539_04525 AL539_04530 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F AL539_04530 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site AL539_04530 IPR020103 Pseudouridine synthase, catalytic domain AL539_04535 IPR002528 Multi antimicrobial extrusion protein AL539_04540 IPR000160 GGDEF domain AL539_04540 IPR029787 Nucleotide cyclase AL539_04550 IPR009664 Protein of unknown function DUF1255 AL539_04550 IPR011051 RmlC-like cupin domain AL539_04550 IPR014710 RmlC-like jelly roll fold AL539_04555 IPR021271 Protein of unknown function DUF2850 AL539_04565 IPR025668 Transposase DDE domain AL539_04575 IPR022742 Putative lysophospholipase AL539_04575 IPR029058 Alpha/Beta hydrolase fold AL539_04580 IPR001647 DNA-binding HTH domain, TetR-type AL539_04580 IPR009057 Homeodomain-like AL539_04580 IPR036271 AL539_04580 AL539_04585 IPR002656 Acyltransferase 3 AL539_04590 IPR004672 Na+/H+ antiporter NhaD AL539_04590 IPR004680 Citrate transporter-like domain AL539_04595 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V AL539_04595 IPR011057 Mss4-like AL539_04600 IPR003740 Membrane Protein of unknown function DUF161 AL539_04610 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site AL539_04610 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain AL539_04610 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding AL539_04610 IPR023546 Methylated-DNA--protein-cysteine methyltransferase AL539_04610 IPR036217 AL539_04610 AL539_04610 IPR036388 AL539_04610 AL539_04610 IPR036631 AL539_04610 AL539_04615 IPR003265 HhH-GPD domain AL539_04615 IPR004026 Ada DNA repair, metal-binding AL539_04615 IPR009057 Homeodomain-like AL539_04615 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal AL539_04615 IPR011257 DNA glycosylase AL539_04615 IPR018060 DNA binding HTH domain, AraC-type AL539_04615 IPR018062 HTH domain AraC-type, conserved site AL539_04615 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal AL539_04615 IPR035451 AL539_04615 AL539_04615 IPR037046 AL539_04615 AL539_04625 IPR032808 AL539_04625 AL539_04630 IPR003829 Pirin, N-terminal domain AL539_04630 IPR011051 RmlC-like cupin domain AL539_04630 IPR012093 Pirin AL539_04630 IPR014710 RmlC-like jelly roll fold AL539_04635 IPR000847 Transcription regulator HTH, LysR AL539_04635 IPR005119 LysR, substrate-binding AL539_04635 IPR036388 AL539_04635 AL539_04635 IPR036390 AL539_04635 AL539_04640 IPR007335 Protein of unknown function DUF413 AL539_04645 IPR021432 Protein of unknown function DUF3081 AL539_04650 IPR004547 Glucosamine-6-phosphate isomerase AL539_04650 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase AL539_04650 IPR018321 Glucosamine-6-phosphate isomerase, conserved site AL539_04650 IPR037171 AL539_04650 AL539_04660 IPR004445 Sodium/glutamate symporter AL539_04665 IPR000524 Transcription regulator HTH, GntR AL539_04665 IPR036388 AL539_04665 AL539_04665 IPR036390 AL539_04665 AL539_04670 IPR003439 ABC transporter-like AL539_04670 IPR003593 AAA+ ATPase domain AL539_04670 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_04680 IPR004445 Sodium/glutamate symporter AL539_04690 IPR025644 Domain of unknown function DUF4344 AL539_04695 IPR007263 Protein of unknown function DUF393 AL539_04695 IPR036249 AL539_04695 AL539_04700 IPR003660 HAMP linker domain AL539_04700 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AL539_04700 IPR004090 Chemotaxis methyl-accepting receptor AL539_04700 IPR033480 AL539_04700 AL539_04705 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain AL539_04705 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site AL539_04705 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase AL539_04705 IPR029000 Cyclophilin-like domain AL539_04710 IPR018728 Domain of unknown function DUF2268 AL539_04715 IPR001789 Signal transduction response regulator, receiver domain AL539_04715 IPR007492 LytTR DNA-binding domain AL539_04715 IPR011006 CheY-like superfamily AL539_04720 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_04720 IPR010559 Signal transduction histidine kinase, internal region AL539_04720 IPR036890 AL539_04720 AL539_04730 IPR011220 Uncharacterised conserved protein UCP028205 AL539_04730 IPR033399 AL539_04730 AL539_04735 IPR003838 Permease FtsX-like AL539_04735 IPR025857 MacB-like periplasmic core domain AL539_04740 IPR003439 ABC transporter-like AL539_04740 IPR003593 AAA+ ATPase domain AL539_04740 IPR017871 ABC transporter, conserved site AL539_04740 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_04750 IPR001182 Cell cycle protein FtsW/RodA AL539_04750 IPR011923 Rod shape-determining protein RodA AL539_04755 IPR002876 Transcriptional regulator TACO1-like AL539_04755 IPR017856 Integrase, N-terminal zinc-binding domain-like AL539_04755 IPR026564 Transcriptional regulator TACO1-like, domain 3 AL539_04755 IPR029072 YebC-like AL539_04760 IPR021700 Protein of unknown function DUF3283 AL539_04765 IPR001789 Signal transduction response regulator, receiver domain AL539_04765 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_04765 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain AL539_04765 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AL539_04765 IPR011006 CheY-like superfamily AL539_04765 IPR033414 AL539_04765 AL539_04765 IPR036097 AL539_04765 AL539_04765 IPR036890 AL539_04765 AL539_04770 IPR001638 Extracellular solute-binding protein, family 3 AL539_04775 IPR000926 GTP cyclohydrolase II, RibA AL539_04775 IPR012816 Conserved hypothetical protein CHP02464 AL539_04775 IPR032677 AL539_04775 AL539_04775 IPR036144 AL539_04775 AL539_04775 IPR037238 AL539_04775 AL539_04785 IPR003439 ABC transporter-like AL539_04785 IPR003593 AAA+ ATPase domain AL539_04785 IPR017871 ABC transporter, conserved site AL539_04785 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_04790 IPR003439 ABC transporter-like AL539_04790 IPR003593 AAA+ ATPase domain AL539_04790 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal AL539_04790 IPR017871 ABC transporter, conserved site AL539_04790 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_04800 IPR021781 Protein of unknown function DUF3346 AL539_04805 IPR025669 AAA domain AL539_04805 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_04810 IPR003115 ParB/Sulfiredoxin AL539_04810 IPR004437 ParB/RepB/Spo0J partition protein family AL539_04810 IPR036086 AL539_04810 AL539_04815 IPR000182 GNAT domain AL539_04815 IPR007807 Helicase domain AL539_04815 IPR013562 Domain of unknown function DUF1726 AL539_04815 IPR016181 Acyl-CoA N-acyltransferase AL539_04815 IPR024914 tRNA(Met) cytidine acetyltransferase TmcA AL539_04815 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_04820 IPR005646 Protein of unknown function DUF342 AL539_04825 IPR001451 Bacterial transferase hexapeptide repeat AL539_04825 IPR011004 Trimeric LpxA-like AL539_04825 IPR018357 Hexapeptide transferase, conserved site AL539_04830 IPR000847 Transcription regulator HTH, LysR AL539_04830 IPR005119 LysR, substrate-binding AL539_04830 IPR036388 AL539_04830 AL539_04830 IPR036390 AL539_04830 AL539_04840 IPR023614 Porin domain AL539_04845 IPR003352 Phosphotransferase system, EIIC AL539_04845 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site AL539_04845 IPR036878 AL539_04845 AL539_04850 IPR001347 Sugar isomerase (SIS) AL539_04850 IPR005486 Glucokinase regulatory protein, conserved site AL539_04850 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ AL539_04860 IPR000281 Helix-turn-helix protein RpiR AL539_04860 IPR001347 Sugar isomerase (SIS) AL539_04860 IPR009057 Homeodomain-like AL539_04860 IPR036388 AL539_04860 AL539_04865 IPR000834 Peptidase M14, carboxypeptidase A AL539_04870 IPR000914 Bacterial extracellular solute-binding protein, family 5 AL539_04870 IPR023765 Bacterial extracellular solute-binding protein, family 5, conserved site AL539_04870 IPR030678 AL539_04870 AL539_04875 IPR005025 NADPH-dependent FMN reductase-like AL539_04875 IPR029039 Flavoprotein-like AL539_04885 IPR006685 Mechanosensitive ion channel MscS AL539_04885 IPR010920 Like-Sm (LSM) domain AL539_04885 IPR023408 AL539_04885 AL539_04890 IPR003439 ABC transporter-like AL539_04890 IPR003593 AAA+ ATPase domain AL539_04890 IPR011527 ABC transporter type 1, transmembrane domain AL539_04890 IPR017750 ATPase, type I secretion system AL539_04890 IPR017871 ABC transporter, conserved site AL539_04890 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_04890 IPR036640 AL539_04890 AL539_04895 IPR000160 GGDEF domain AL539_04895 IPR001633 EAL domain AL539_04895 IPR029787 Nucleotide cyclase AL539_04895 IPR032244 AL539_04895 AL539_04895 IPR035919 AL539_04895 AL539_04900 IPR010319 Transglutaminase-like cysteine peptidase, predicted AL539_04905 IPR003997 RTX secretion protein D, Gram-negative bacteria AL539_04905 IPR006144 Secretion protein HlyD, conserved site AL539_04905 IPR010129 Type I secretion membrane fusion protein, HlyD AL539_04905 IPR039562 AL539_04905 AL539_04910 IPR001789 Signal transduction response regulator, receiver domain AL539_04910 IPR002197 DNA binding HTH domain, Fis-type AL539_04910 IPR009057 Homeodomain-like AL539_04910 IPR011006 CheY-like superfamily AL539_04910 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_04915 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_04915 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AL539_04915 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) AL539_04915 IPR029151 Periplasmic sensor domain-like AL539_04915 IPR033479 AL539_04915 AL539_04915 IPR036097 AL539_04915 AL539_04915 IPR036890 AL539_04915 AL539_04920 IPR000659 Pyridoxamine 5'-phosphate oxidase AL539_04920 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain AL539_04920 IPR012349 FMN-binding split barrel AL539_04920 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal AL539_04920 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site AL539_04925 IPR000014 PAS domain AL539_04925 IPR000792 Transcription regulator LuxR, C-terminal AL539_04925 IPR013656 PAS fold-4 AL539_04925 IPR016032 Signal transduction response regulator, C-terminal effector AL539_04925 IPR035965 AL539_04925 AL539_04925 IPR036388 AL539_04925 AL539_04930 IPR009057 Homeodomain-like AL539_04930 IPR018060 DNA binding HTH domain, AraC-type AL539_04930 IPR020449 Transcription regulator HTH, AraC- type AL539_04930 IPR037923 AL539_04930 AL539_04935 IPR002872 Proline dehydrogenase domain AL539_04935 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 AL539_04935 IPR015590 Aldehyde dehydrogenase domain AL539_04935 IPR016160 Aldehyde dehydrogenase, cysteine active site AL539_04935 IPR016161 Aldehyde/histidinol dehydrogenase AL539_04935 IPR016162 Aldehyde dehydrogenase, N-terminal AL539_04935 IPR016163 Aldehyde dehydrogenase, C-terminal AL539_04935 IPR024082 Proline dehydrogenase PutA, domain II AL539_04935 IPR024089 Proline dehydrogenase PutA, domain I/II AL539_04935 IPR025703 Bifunctional protein PutA AL539_04935 IPR029041 FAD-linked oxidoreductase-like AL539_04940 IPR016161 Aldehyde/histidinol dehydrogenase AL539_04940 IPR016162 Aldehyde dehydrogenase, N-terminal AL539_04945 IPR001734 Sodium/solute symporter AL539_04945 IPR011851 Sodium/proline symporter AL539_04945 IPR038377 AL539_04945 AL539_04950 IPR000182 GNAT domain AL539_04950 IPR016181 Acyl-CoA N-acyltransferase AL539_04955 IPR000504 RNA recognition motif domain AL539_04955 IPR012677 Nucleotide-binding, alpha-beta plait AL539_04955 IPR035979 AL539_04955 AL539_04965 IPR000182 GNAT domain AL539_04965 IPR016181 Acyl-CoA N-acyltransferase AL539_04975 IPR000485 AsnC-type HTH domain AL539_04975 IPR011008 Dimeric alpha-beta barrel AL539_04975 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AL539_04975 IPR019887 Transcription regulator AsnC-type, C-terminal AL539_04975 IPR019888 Transcription regulator AsnC-type AL539_04975 IPR036388 AL539_04975 AL539_04975 IPR036390 AL539_04975 AL539_04985 IPR003439 ABC transporter-like AL539_04985 IPR003593 AAA+ ATPase domain AL539_04985 IPR011527 ABC transporter type 1, transmembrane domain AL539_04985 IPR017871 ABC transporter, conserved site AL539_04985 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_04985 IPR036640 AL539_04985 AL539_04990 IPR014541 Predicted amidinotransferase, FN0238 type AL539_04995 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site AL539_04995 IPR001650 Helicase, C-terminal AL539_04995 IPR011545 DEAD/DEAH box helicase domain AL539_04995 IPR014001 Helicase, superfamily 1/2, ATP-binding domain AL539_04995 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_05000 IPR005163 3-alpha domain AL539_05000 IPR005302 Molybdenum cofactor sulfurase, C-terminal AL539_05000 IPR011037 Pyruvate kinase-like, insert domain AL539_05005 IPR009057 Homeodomain-like AL539_05005 IPR011051 RmlC-like cupin domain AL539_05005 IPR014710 RmlC-like jelly roll fold AL539_05005 IPR018060 DNA binding HTH domain, AraC-type AL539_05005 IPR018062 HTH domain AraC-type, conserved site AL539_05010 IPR011032 GroES (chaperonin 10)-like AL539_05010 IPR013154 Alcohol dehydrogenase GroES-like AL539_05010 IPR020843 Polyketide synthase, enoylreductase AL539_05010 IPR036291 AL539_05010 AL539_05015 IPR016870 Uncharacterised conserved protein UCP028137, membrane AL539_05020 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site AL539_05020 IPR007627 RNA polymerase sigma-70 region 2 AL539_05020 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 AL539_05020 IPR013324 RNA polymerase sigma factor, region 3/4 AL539_05020 IPR013325 RNA polymerase sigma factor, region 2 AL539_05020 IPR014284 RNA polymerase sigma-70 like domain AL539_05020 IPR036388 AL539_05020 AL539_05025 IPR002818 ThiJ/PfpI AL539_05025 IPR029062 Class I glutamine amidotransferase-like AL539_05035 IPR000847 Transcription regulator HTH, LysR AL539_05035 IPR005119 LysR, substrate-binding AL539_05035 IPR036388 AL539_05035 AL539_05035 IPR036390 AL539_05035 AL539_05040 IPR014044 CAP domain AL539_05040 IPR035940 AL539_05040 AL539_05045 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL539_05055 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II AL539_05055 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site AL539_05055 IPR012081 Alkyl hydroperoxide reductase subunit F AL539_05055 IPR012336 Thioredoxin-like fold AL539_05055 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain AL539_05055 IPR036188 AL539_05055 AL539_05055 IPR036249 AL539_05055 AL539_05060 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant AL539_05060 IPR017559 Alkyl hydroperoxide reductase subunit C AL539_05060 IPR019479 Peroxiredoxin, C-terminal AL539_05060 IPR024706 Peroxiredoxin, AhpC-type AL539_05060 IPR036249 AL539_05060 AL539_05065 IPR000835 MarR-type HTH domain AL539_05065 IPR036388 AL539_05065 AL539_05065 IPR036390 AL539_05065 AL539_05070 IPR003718 OsmC/Ohr family AL539_05070 IPR015946 K homology domain-like, alpha/beta AL539_05070 IPR019953 Organic hydroperoxide resistance protein famiy AL539_05070 IPR036102 AL539_05070 AL539_05075 IPR036165 AL539_05075 AL539_05080 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family AL539_05085 IPR003848 Domain of unknown function DUF218 AL539_05085 IPR011990 Tetratricopeptide-like helical domain AL539_05090 IPR009057 Homeodomain-like AL539_05090 IPR010499 Bacterial transcription activator, effector binding AL539_05090 IPR011256 Regulatory factor, effector binding domain AL539_05090 IPR018060 DNA binding HTH domain, AraC-type AL539_05090 IPR018062 HTH domain AraC-type, conserved site AL539_05090 IPR020449 Transcription regulator HTH, AraC- type AL539_05090 IPR029442 GyrI-like small molecule binding domain AL539_05095 IPR009057 Homeodomain-like AL539_05095 IPR018060 DNA binding HTH domain, AraC-type AL539_05100 IPR000182 GNAT domain AL539_05100 IPR016181 Acyl-CoA N-acyltransferase AL539_05105 IPR021376 Protein of unknown function DUF2999 AL539_05110 IPR010791 Hydroxyneurosporene synthase AL539_05110 IPR023374 AttH-like domain AL539_05115 IPR003838 Permease FtsX-like AL539_05120 IPR003439 ABC transporter-like AL539_05120 IPR003593 AAA+ ATPase domain AL539_05120 IPR017871 ABC transporter, conserved site AL539_05120 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_05125 IPR021724 Protein of unknown function DUF3297 AL539_05130 IPR001539 Peptidase U32 AL539_05135 IPR005180 Domain of unknown function DUF302 AL539_05135 IPR035923 AL539_05135 AL539_05140 IPR000183 Ornithine/DAP/Arg decarboxylase AL539_05140 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal AL539_05140 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal AL539_05140 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal AL539_05140 IPR029066 PLP-binding barrel AL539_05145 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal AL539_05145 IPR022770 Ferric iron reductase FhuF domain AL539_05150 IPR011701 Major facilitator superfamily AL539_05150 IPR036259 AL539_05150 AL539_05155 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal AL539_05155 IPR022770 Ferric iron reductase FhuF domain AL539_05165 IPR000531 TonB-dependent receptor, beta-barrel AL539_05165 IPR010105 TonB-dependent siderophore receptor AL539_05165 IPR012910 TonB-dependent receptor, plug AL539_05165 IPR036942 AL539_05165 AL539_05165 IPR037066 AL539_05165 AL539_05170 IPR000531 TonB-dependent receptor, beta-barrel AL539_05170 IPR010105 TonB-dependent siderophore receptor AL539_05170 IPR010916 TonB box, conserved site AL539_05170 IPR012910 TonB-dependent receptor, plug AL539_05170 IPR036942 AL539_05170 AL539_05170 IPR037066 AL539_05170 AL539_05175 IPR002491 ABC transporter periplasmic binding domain AL539_05180 IPR000522 ABC transporter, permease protein AL539_05180 IPR037294 AL539_05180 AL539_05185 IPR000522 ABC transporter, permease protein AL539_05185 IPR037294 AL539_05185 AL539_05190 IPR003439 ABC transporter-like AL539_05190 IPR003593 AAA+ ATPase domain AL539_05190 IPR017871 ABC transporter, conserved site AL539_05190 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_05195 IPR003660 HAMP linker domain AL539_05195 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AL539_05195 IPR033479 AL539_05195 AL539_05200 IPR001431 Peptidase M16, zinc-binding site AL539_05200 IPR007863 Peptidase M16, C-terminal domain AL539_05200 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like AL539_05200 IPR011765 Peptidase M16, N-terminal AL539_05205 IPR007607 Protein of unknown function DUF583 AL539_05210 IPR011055 Duplicated hybrid motif AL539_05210 IPR016047 Peptidase M23 AL539_05220 IPR002913 START domain AL539_05220 IPR023393 START-like domain AL539_05220 IPR028347 START domain-containing protein AL539_05225 IPR001958 Tetracycline resistance protein, TetA/multidrug resistance protein MdtG AL539_05225 IPR011701 Major facilitator superfamily AL539_05225 IPR036259 AL539_05225 AL539_05230 IPR006119 Resolvase, N-terminal AL539_05230 IPR006120 Resolvase, HTH domain AL539_05230 IPR036162 AL539_05230 AL539_05235 IPR000843 Transcription regulator HTH, LacI AL539_05235 IPR010982 Lambda repressor-like, DNA-binding domain AL539_05235 IPR028082 Periplasmic binding protein-like I AL539_05240 IPR001734 Sodium/solute symporter AL539_05240 IPR038377 AL539_05240 AL539_05245 IPR009959 Polyketide cyclase SnoaL-like domain AL539_05245 IPR032710 AL539_05245 AL539_05250 IPR009959 Polyketide cyclase SnoaL-like domain AL539_05250 IPR032710 AL539_05250 AL539_05255 IPR004681 TRAP transporter permease protein AL539_05255 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit AL539_05260 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component AL539_05265 IPR004682 TRAP dicarboxylate transporter AL539_05265 IPR018389 Bacterial extracellular solute-binding protein, family 7 AL539_05265 IPR038404 AL539_05265 AL539_05270 IPR000843 Transcription regulator HTH, LacI AL539_05270 IPR010982 Lambda repressor-like, DNA-binding domain AL539_05270 IPR028082 Periplasmic binding protein-like I AL539_05275 IPR005000 HpcH/HpaI aldolase/citrate lyase domain AL539_05275 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain AL539_05280 IPR001692 Histidinol dehydrogenase, conserved site AL539_05280 IPR012131 Histidinol dehydrogenase AL539_05280 IPR016161 Aldehyde/histidinol dehydrogenase AL539_05280 IPR022695 Histidinol dehydrogenase, monofunctional AL539_05285 IPR002347 Glucose/ribitol dehydrogenase AL539_05285 IPR020904 Short-chain dehydrogenase/reductase, conserved site AL539_05285 IPR036291 AL539_05285 AL539_05290 IPR011051 RmlC-like cupin domain AL539_05290 IPR014710 RmlC-like jelly roll fold AL539_05295 IPR000073 Alpha/beta hydrolase fold-1 AL539_05295 IPR022742 Putative lysophospholipase AL539_05295 IPR029058 Alpha/Beta hydrolase fold AL539_05300 IPR023614 Porin domain AL539_05305 IPR032710 AL539_05305 AL539_05305 IPR037401 AL539_05305 AL539_05310 IPR011701 Major facilitator superfamily AL539_05310 IPR036259 AL539_05310 AL539_05320 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form AL539_05320 IPR005130 Serine dehydratase-like, alpha subunit AL539_05320 IPR005131 Serine dehydratase beta chain AL539_05320 IPR029009 Allosteric substrate binding domain AL539_05325 IPR004193 Glycoside hydrolase, family 13, N-terminal AL539_05325 IPR006047 Glycosyl hydrolase, family 13, catalytic domain AL539_05325 IPR011837 Glycogen debranching enzyme, GlgX type AL539_05325 IPR013780 Glycosyl hydrolase, family 13, all-beta AL539_05325 IPR013783 Immunoglobulin-like fold AL539_05325 IPR014756 Immunoglobulin E-set AL539_05325 IPR017853 Glycoside hydrolase, superfamily AL539_05330 IPR003192 Porin, LamB type AL539_05330 IPR036998 AL539_05330 AL539_05335 IPR010794 Maltose operon periplasmic AL539_05345 IPR006047 Glycosyl hydrolase, family 13, catalytic domain AL539_05345 IPR013780 Glycosyl hydrolase, family 13, all-beta AL539_05345 IPR017853 Glycoside hydrolase, superfamily AL539_05350 IPR003305 Carbohydrate-binding, CenC-like AL539_05350 IPR007346 Endonuclease I AL539_05350 IPR008979 Galactose-binding domain-like AL539_05355 IPR004193 Glycoside hydrolase, family 13, N-terminal AL539_05355 IPR005323 Bacterial pullanase-associated domain AL539_05355 IPR006047 Glycosyl hydrolase, family 13, catalytic domain AL539_05355 IPR011839 Alpha-1,6-glucosidases, pullulanase-type AL539_05355 IPR013780 Glycosyl hydrolase, family 13, all-beta AL539_05355 IPR013783 Immunoglobulin-like fold AL539_05355 IPR013784 Carbohydrate-binding-like fold AL539_05355 IPR014756 Immunoglobulin E-set AL539_05355 IPR017853 Glycoside hydrolase, superfamily AL539_05355 IPR024561 Alpha-1,6-glucosidases, pullulanase-type, C-terminal AL539_05360 IPR006597 Sel1-like AL539_05360 IPR011990 Tetratricopeptide-like helical domain AL539_05365 IPR007159 AbrB-like domain AL539_05365 IPR037914 AL539_05365 AL539_05370 IPR004625 Pyridoxal phosphate (active vitamin B6) biosynthesis, pyridoxal kinase AL539_05370 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase AL539_05370 IPR023685 Pyridoxal kinase PdxY AL539_05370 IPR029056 Ribokinase-like AL539_05375 IPR001991 Sodium:dicarboxylate symporter AL539_05375 IPR023025 Serine/threonine transporter SstT AL539_05375 IPR036458 AL539_05375 AL539_05380 IPR004881 Ribosome biogenesis GTPase RsgA, putative AL539_05380 IPR010914 EngC GTPase AL539_05380 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_05385 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site AL539_05385 IPR036878 AL539_05385 AL539_05390 IPR003782 Copper chaperone SCO1/SenC AL539_05390 IPR036249 AL539_05390 AL539_05400 IPR007163 Protein of unknown function DUF368 AL539_05405 IPR000792 Transcription regulator LuxR, C-terminal AL539_05405 IPR011990 Tetratricopeptide-like helical domain AL539_05405 IPR016032 Signal transduction response regulator, C-terminal effector AL539_05405 IPR023768 Transcriptional regulator HTH-type, MalT AL539_05405 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_05405 IPR036388 AL539_05405 AL539_05410 IPR000811 Glycosyl transferase, family 35 AL539_05410 IPR011833 Glycogen/starch/alpha-glucan phosphorylase AL539_05410 IPR035090 AL539_05410 AL539_05415 IPR003385 Glycoside hydrolase, family 77 AL539_05415 IPR017853 Glycoside hydrolase, superfamily AL539_05420 IPR004193 Glycoside hydrolase, family 13, N-terminal AL539_05420 IPR006047 Glycosyl hydrolase, family 13, catalytic domain AL539_05420 IPR006048 Alpha-amylase, C-terminal all beta AL539_05420 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB AL539_05420 IPR013780 Glycosyl hydrolase, family 13, all-beta AL539_05420 IPR013783 Immunoglobulin-like fold AL539_05420 IPR014756 Immunoglobulin E-set AL539_05420 IPR017853 Glycoside hydrolase, superfamily AL539_05420 IPR037439 AL539_05420 AL539_05425 IPR001264 Glycosyl transferase, family 51 AL539_05425 IPR011812 Monofunctional biosynthetic peptidoglycan transglycosylase AL539_05425 IPR023346 Lysozyme-like domain AL539_05425 IPR036950 AL539_05425 AL539_05430 IPR006047 Glycosyl hydrolase, family 13, catalytic domain AL539_05430 IPR014635 Alpha-amylase, MalS type AL539_05430 IPR017853 Glycoside hydrolase, superfamily AL539_05435 IPR012336 Thioredoxin-like fold AL539_05435 IPR036249 AL539_05435 AL539_05445 IPR011642 Nucleoside recognition Gate AL539_05450 IPR011642 Nucleoside recognition Gate AL539_05455 IPR002933 Peptidase M20 AL539_05455 IPR011650 Peptidase M20, dimerisation domain AL539_05455 IPR017150 Peptidase M20, glutamate carboxypeptidase AL539_05455 IPR036264 AL539_05455 AL539_05460 IPR010652 Protein of unknown function DUF1232 AL539_05460 IPR016983 Uncharacterised conserved protein UCP031804 AL539_05475 IPR001991 Sodium:dicarboxylate symporter AL539_05475 IPR036458 AL539_05475 AL539_05480 IPR014973 Protein of unknown function DUF1835 AL539_05485 IPR000847 Transcription regulator HTH, LysR AL539_05485 IPR005119 LysR, substrate-binding AL539_05485 IPR036388 AL539_05485 AL539_05485 IPR036390 AL539_05485 AL539_05490 IPR011008 Dimeric alpha-beta barrel AL539_05490 IPR014910 Mono-oxygenase, YdhR AL539_05505 IPR025668 Transposase DDE domain AL539_05515 IPR017867 Protein-tyrosine phosphatase, low molecular weight AL539_05515 IPR023485 Phosphotyrosine protein phosphatase I superfamily AL539_05515 IPR036196 AL539_05515 AL539_05520 IPR003715 Polysaccharide export protein AL539_05520 IPR019554 Soluble ligand binding domain AL539_05525 IPR000415 Nitroreductase-like AL539_05525 IPR016446 Flavin oxidoreductase Frp family AL539_05525 IPR029479 Nitroreductase AL539_05530 IPR002771 Multiple antibiotic resistance (MarC)-related AL539_05535 IPR002641 Patatin/Phospholipase A2-related AL539_05535 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AL539_05540 IPR004302 Chitin-binding, domain 3 AL539_05540 IPR014756 Immunoglobulin E-set AL539_05540 IPR020879 N-acetylglucosamine-binding protein A AL539_05545 IPR000782 FAS1 domain AL539_05545 IPR036378 AL539_05545 AL539_05550 IPR002081 Cryptochrome/DNA photolyase, class 1 AL539_05550 IPR005101 DNA photolyase, FAD-binding/Cryptochrome, C-terminal AL539_05550 IPR006050 DNA photolyase, N-terminal AL539_05550 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL539_05550 IPR036134 AL539_05550 AL539_05550 IPR036155 AL539_05550 AL539_05560 IPR001763 Rhodanese-like domain AL539_05560 IPR020936 Uncharacterised protein family UPF0176 AL539_05560 IPR036873 AL539_05560 AL539_05565 IPR000073 Alpha/beta hydrolase fold-1 AL539_05565 IPR002410 Peptidase S33 AL539_05565 IPR029058 Alpha/Beta hydrolase fold AL539_05570 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal AL539_05570 IPR012338 Beta-lactamase/transpeptidase-like AL539_05570 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal AL539_05570 IPR015956 Penicillin-binding protein-associated AL539_05570 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A AL539_05570 IPR037167 AL539_05570 AL539_05575 IPR006047 Glycosyl hydrolase, family 13, catalytic domain AL539_05575 IPR013780 Glycosyl hydrolase, family 13, all-beta AL539_05575 IPR017853 Glycoside hydrolase, superfamily AL539_05575 IPR019248 Domain of unknown function DUF2223 AL539_05580 IPR009057 Homeodomain-like AL539_05580 IPR018060 DNA binding HTH domain, AraC-type AL539_05580 IPR038175 AL539_05580 AL539_05585 IPR000415 Nitroreductase-like AL539_05585 IPR029479 Nitroreductase AL539_05590 IPR007138 Antibiotic biosynthesis monooxygenase-like domain AL539_05590 IPR011008 Dimeric alpha-beta barrel AL539_05595 IPR000847 Transcription regulator HTH, LysR AL539_05595 IPR005119 LysR, substrate-binding AL539_05595 IPR036388 AL539_05595 AL539_05595 IPR036390 AL539_05595 AL539_05600 IPR018668 Protein of unknown function DUF2132 AL539_05600 IPR036361 AL539_05600 AL539_05605 IPR029069 HotDog domain AL539_05610 IPR001433 Oxidoreductase FAD/NAD(P)-binding AL539_05610 IPR008333 Oxidoreductase, FAD-binding domain AL539_05610 IPR017938 Riboflavin synthase-like beta-barrel AL539_05610 IPR039261 AL539_05610 AL539_05615 IPR010432 RDD AL539_05620 IPR018635 Uncharacterised protein family UPF0319 AL539_05625 IPR002549 Uncharacterised protein family UPF0118 AL539_05630 IPR013099 Two pore domain potassium channel domain AL539_05635 IPR006143 RND efflux pump, membrane fusion protein AL539_05635 IPR032317 AL539_05635 AL539_05640 IPR012451 Protein of unknown function DUF1656 AL539_05645 IPR003423 Outer membrane efflux protein AL539_05650 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein AL539_05660 IPR000620 Drug/metabolite transporter AL539_05665 IPR000847 Transcription regulator HTH, LysR AL539_05665 IPR005119 LysR, substrate-binding AL539_05665 IPR036388 AL539_05665 AL539_05665 IPR036390 AL539_05665 AL539_05670 IPR005829 Sugar transporter, conserved site AL539_05670 IPR011701 Major facilitator superfamily AL539_05670 IPR023697 Multidrug resistance protein MdtL AL539_05670 IPR036259 AL539_05670 AL539_05675 IPR000182 GNAT domain AL539_05675 IPR016181 Acyl-CoA N-acyltransferase AL539_05680 IPR000182 GNAT domain AL539_05680 IPR016181 Acyl-CoA N-acyltransferase AL539_05685 IPR021242 Protein of unknown function DUF2799 AL539_05690 IPR001789 Signal transduction response regulator, receiver domain AL539_05690 IPR001867 Signal transduction response regulator, C-terminal AL539_05690 IPR011006 CheY-like superfamily AL539_05690 IPR016032 Signal transduction response regulator, C-terminal effector AL539_05690 IPR036388 AL539_05690 AL539_05695 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_05695 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain AL539_05695 IPR029151 Periplasmic sensor domain-like AL539_05695 IPR036097 AL539_05695 AL539_05695 IPR036890 AL539_05695 AL539_05700 IPR010364 Uncharacterised protein family, inner membrane CreD AL539_05705 IPR021257 Protein of unknown function DUF2809 AL539_05710 IPR001585 Transaldolase AL539_05710 IPR013785 Aldolase-type TIM barrel AL539_05710 IPR018225 Transaldolase, active site AL539_05715 IPR001989 Radical-activating enzyme, conserved site AL539_05715 IPR007197 Radical SAM AL539_05715 IPR012839 Glycyl radical enzyme activase AL539_05715 IPR013785 Aldolase-type TIM barrel AL539_05720 IPR001150 Glycine radical domain AL539_05720 IPR004184 Pyruvate formate lyase domain AL539_05720 IPR005949 Formate acetyltransferase AL539_05720 IPR010098 Glycyl radical enzyme, PFL2/glycerol dehydratase family AL539_05720 IPR019777 Formate C-acetyltransferase glycine radical, conserved site AL539_05725 IPR001647 DNA-binding HTH domain, TetR-type AL539_05725 IPR009057 Homeodomain-like AL539_05725 IPR036271 AL539_05725 AL539_05730 IPR007065 HPP AL539_05735 IPR012663 Conserved hypothetical protein CHP02450, tryptophan-rich AL539_05740 IPR012544 Bacterial Pleckstrin homology domain AL539_05740 IPR037063 AL539_05740 AL539_05755 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal AL539_05755 IPR025713 Motility protein B, N-terminal domain AL539_05755 IPR036737 AL539_05755 AL539_05760 IPR000540 Flagellar motor protein MotA, conserved site AL539_05760 IPR002898 MotA/TolQ/ExbB proton channel AL539_05760 IPR022522 Flagellar motor stator, MotA AL539_05765 IPR000943 RNA polymerase sigma-70 AL539_05765 IPR007627 RNA polymerase sigma-70 region 2 AL539_05765 IPR007630 RNA polymerase sigma-70 region 4 AL539_05765 IPR012845 RNA polymerase sigma factor, FliA/WhiG AL539_05765 IPR013324 RNA polymerase sigma factor, region 3/4 AL539_05765 IPR013325 RNA polymerase sigma factor, region 2 AL539_05765 IPR014284 RNA polymerase sigma-70 like domain AL539_05770 IPR005503 Flagellar basal body-associated protein FliL AL539_05775 IPR021136 Flagellar hook-length control protein-like, C-terminal AL539_05775 IPR038610 AL539_05775 AL539_05785 IPR003713 Flagellar protein FliS AL539_05785 IPR036584 AL539_05785 AL539_05790 IPR003481 Flagellar hook-associated protein 2, N-terminal AL539_05790 IPR010809 Flagellar hook-associated 2, C-terminal AL539_05790 IPR010810 Flagellin hook, IN motif AL539_05800 IPR001029 Flagellin, D0/D1 domain AL539_05800 IPR001492 Flagellin AL539_05805 IPR001633 EAL domain AL539_05805 IPR035919 AL539_05805 AL539_05810 IPR001712 Type III secretion system FHIPEP AL539_05810 IPR006301 Flagellar biosynthesis protein FlhA AL539_05810 IPR025505 FHIPEP conserved site AL539_05815 IPR006135 Type III secretion system substrate exporter AL539_05815 IPR006136 Type III exporter system, flagellar biosynthetic protein FlhB AL539_05815 IPR029025 Type III secretion system substrate exporter, C-terminal AL539_05820 IPR002010 Type III secretion system inner membrane R protein AL539_05820 IPR006303 Flagellar biosynthesis protein FliR AL539_05825 IPR002191 Bacterial export protein family 3 AL539_05825 IPR006305 Flagellar biosynthesis protein FliQ AL539_05830 IPR005837 Flagellar transport protein FliP AL539_05830 IPR005838 Type III secretion system inner membrane P protein AL539_05835 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb AL539_05835 IPR001543 Surface presentation of antigen (SpoA) AL539_05835 IPR012826 Flagellar motor switch FliN AL539_05835 IPR036429 AL539_05835 AL539_05840 IPR001543 Surface presentation of antigen (SpoA) AL539_05840 IPR036429 AL539_05840 AL539_05845 IPR006664 Outer membrane protein, bacterial AL539_05845 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal AL539_05845 IPR036737 AL539_05845 AL539_05850 IPR002078 RNA polymerase sigma factor 54 interaction domain AL539_05850 IPR002197 DNA binding HTH domain, Fis-type AL539_05850 IPR003593 AAA+ ATPase domain AL539_05850 IPR009057 Homeodomain-like AL539_05850 IPR011006 CheY-like superfamily AL539_05850 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AL539_05850 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AL539_05850 IPR025944 Sigma-54 interaction domain, conserved site AL539_05850 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_05855 IPR001624 Flagellar hook-basal body complex protein FliE AL539_05860 IPR000067 Flagellar M-ring protein FliF AL539_05860 IPR006182 Secretory protein YscJ/FliF AL539_05860 IPR013556 Flagellar M-ring C-terminal AL539_05865 IPR000090 Flagellar motor switch protein FliG AL539_05865 IPR011002 Flagellar motor switch protein FliG, alpha-helical AL539_05865 IPR023087 AL539_05865 AL539_05865 IPR028263 Flagellar motor switch protein FliG, N-terminal domain AL539_05865 IPR032779 AL539_05865 AL539_05870 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE AL539_05875 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain AL539_05875 IPR003593 AAA+ ATPase domain AL539_05875 IPR005714 ATPase, type III secretion system, FliI/YscN AL539_05875 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site AL539_05875 IPR020005 Flagellar export ATPase FliI, clade 1 AL539_05875 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_05880 IPR012823 Flagellar export FliJ AL539_05885 IPR001254 Peptidase S1 AL539_05885 IPR001314 Peptidase S1A, chymotrypsin-type AL539_05885 IPR009003 Trypsin-like cysteine/serine peptidase domain AL539_05885 IPR018114 Peptidase S1, trypsin family, active site AL539_05885 IPR033116 AL539_05885 AL539_05890 IPR000847 Transcription regulator HTH, LysR AL539_05890 IPR005119 LysR, substrate-binding AL539_05890 IPR036388 AL539_05890 AL539_05890 IPR036390 AL539_05890 AL539_05895 IPR000620 Drug/metabolite transporter AL539_05900 IPR013538 Activator of Hsp90 ATPase homologue 1-like AL539_05900 IPR023393 START-like domain AL539_05905 IPR003141 Polymerase/histidinol phosphatase, N-terminal AL539_05905 IPR016195 Polymerase/histidinol phosphatase-like AL539_05905 IPR023710 Probable phosphatase YcdX AL539_05910 IPR009155 Cytochrome b562 AL539_05910 IPR010980 Cytochrome c/b562 AL539_05920 IPR005625 PepSY-associated TM helix AL539_05925 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AL539_05925 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL539_05930 IPR000847 Transcription regulator HTH, LysR AL539_05930 IPR005119 LysR, substrate-binding AL539_05930 IPR036388 AL539_05930 AL539_05930 IPR036390 AL539_05930 AL539_05940 IPR009465 Spondin, N-terminal AL539_05940 IPR038678 AL539_05940 AL539_05945 IPR009465 Spondin, N-terminal AL539_05945 IPR038678 AL539_05945 AL539_05950 IPR001789 Signal transduction response regulator, receiver domain AL539_05950 IPR001867 Signal transduction response regulator, C-terminal AL539_05950 IPR011006 CheY-like superfamily AL539_05950 IPR016032 Signal transduction response regulator, C-terminal effector AL539_05950 IPR036388 AL539_05950 AL539_05955 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain AL539_05955 IPR036097 AL539_05955 AL539_05955 IPR036890 AL539_05955 AL539_05960 IPR001424 Superoxide dismutase, copper/zinc binding domain AL539_05960 IPR018152 Superoxide dismutase, copper/zinc, binding site AL539_05960 IPR036423 AL539_05960 AL539_05965 IPR000192 Aminotransferase class V domain AL539_05965 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 AL539_05965 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 AL539_05965 IPR015424 Pyridoxal phosphate-dependent transferase AL539_05965 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AL539_05965 IPR020578 Aminotransferase class-V pyridoxal-phosphate binding site AL539_05970 IPR001638 Extracellular solute-binding protein, family 3 AL539_05975 IPR000160 GGDEF domain AL539_05975 IPR001633 EAL domain AL539_05975 IPR029787 Nucleotide cyclase AL539_05975 IPR035919 AL539_05975 AL539_05980 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site AL539_05980 IPR004839 Aminotransferase, class I/classII AL539_05980 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase AL539_05980 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 AL539_05980 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 AL539_05980 IPR015424 Pyridoxal phosphate-dependent transferase AL539_05985 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site AL539_05985 IPR004627 L-threonine 3-dehydrogenase AL539_05985 IPR011032 GroES (chaperonin 10)-like AL539_05985 IPR013149 Alcohol dehydrogenase, C-terminal AL539_05985 IPR013154 Alcohol dehydrogenase GroES-like AL539_05985 IPR020843 Polyketide synthase, enoylreductase AL539_05985 IPR036291 AL539_05985 AL539_05990 IPR007893 Spore coat protein U AL539_05995 IPR007893 Spore coat protein U AL539_06000 IPR008962 PapD-like AL539_06000 IPR013783 Immunoglobulin-like fold AL539_06000 IPR016147 PapD, N-terminal, bacterial AL539_06005 IPR000015 Outer membrane usher protein AL539_06010 IPR007893 Spore coat protein U AL539_06015 IPR001148 Alpha carbonic anhydrase AL539_06015 IPR018338 Carbonic anhydrase, alpha-class, conserved site AL539_06015 IPR036398 AL539_06015 AL539_06020 IPR006685 Mechanosensitive ion channel MscS AL539_06020 IPR006686 Mechanosensitive ion channel MscS, conserved site AL539_06020 IPR010920 Like-Sm (LSM) domain AL539_06020 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 AL539_06020 IPR011066 Mechanosensitive ion channel MscS, C-terminal AL539_06020 IPR023408 AL539_06020 AL539_06025 IPR010982 Lambda repressor-like, DNA-binding domain AL539_06030 IPR000262 FMN-dependent dehydrogenase AL539_06030 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site AL539_06030 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent AL539_06030 IPR013785 Aldolase-type TIM barrel AL539_06035 IPR003804 L-lactate permease AL539_06040 IPR000847 Transcription regulator HTH, LysR AL539_06040 IPR005119 LysR, substrate-binding AL539_06040 IPR036388 AL539_06040 AL539_06040 IPR036390 AL539_06040 AL539_06045 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain AL539_06045 IPR002470 Peptidase S9A, prolyl oligopeptidase AL539_06045 IPR002471 Peptidase S9, serine active site AL539_06045 IPR023302 Peptidase S9A, N-terminal domain AL539_06045 IPR029058 Alpha/Beta hydrolase fold AL539_06050 IPR003439 ABC transporter-like AL539_06050 IPR003593 AAA+ ATPase domain AL539_06050 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal AL539_06050 IPR017871 ABC transporter, conserved site AL539_06050 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_06060 IPR008269 Peptidase S16, Lon C-terminal AL539_06060 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AL539_06060 IPR020568 Ribosomal protein S5 domain 2-type fold AL539_06060 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_06065 IPR003660 HAMP linker domain AL539_06065 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AL539_06070 IPR023614 Porin domain AL539_06075 IPR009875 PilZ domain AL539_06075 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal AL539_06075 IPR012349 FMN-binding split barrel AL539_06080 IPR016181 Acyl-CoA N-acyltransferase AL539_06080 IPR031165 AL539_06080 AL539_06085 IPR004119 Protein of unknown function DUF227 AL539_06085 IPR011009 Protein kinase-like domain AL539_06085 IPR015897 CHK kinase-like AL539_06090 IPR000182 GNAT domain AL539_06090 IPR016181 Acyl-CoA N-acyltransferase AL539_06095 IPR004494 MauM/NapG ferredoxin-type protein AL539_06095 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL539_06095 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL539_06095 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AL539_06100 IPR011886 Ferredoxin-type protein, NapH/MauN family AL539_06100 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL539_06100 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL539_06105 IPR011701 Major facilitator superfamily AL539_06105 IPR036259 AL539_06105 AL539_06110 IPR025424 YrhK domain AL539_06115 IPR003339 ABC/ECF transporter, transmembrane component AL539_06120 IPR003439 ABC transporter-like AL539_06120 IPR003593 AAA+ ATPase domain AL539_06120 IPR017871 ABC transporter, conserved site AL539_06120 IPR022216 ABC cobalt transporter AL539_06120 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_06125 IPR009825 ECF transporter, substrate-specific component-like AL539_06125 IPR022914 Protein of unknown function UPF0397 AL539_06130 IPR039562 AL539_06130 AL539_06135 IPR011223 Uncharacterised conserved protein UCP028770 AL539_06140 IPR000160 GGDEF domain AL539_06140 IPR011990 Tetratricopeptide-like helical domain AL539_06140 IPR029787 Nucleotide cyclase AL539_06145 IPR011990 Tetratricopeptide-like helical domain AL539_06145 IPR019734 Tetratricopeptide repeat AL539_06155 IPR000845 Nucleoside phosphorylase domain AL539_06155 IPR004402 Purine nucleoside phosphorylase DeoD-type AL539_06155 IPR035994 AL539_06155 AL539_06160 IPR007553 Domain of unknown function DUF523 AL539_06160 IPR013560 Domain of unknown function DUF1722 AL539_06160 IPR017087 Uncharacterised conserved protein UCP037004 AL539_06165 IPR000551 MerR-type HTH domain AL539_06165 IPR009061 DNA binding domain, putative AL539_06170 IPR002081 Cryptochrome/DNA photolyase, class 1 AL539_06170 IPR005101 DNA photolyase, FAD-binding/Cryptochrome, C-terminal AL539_06170 IPR006050 DNA photolyase, N-terminal AL539_06170 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL539_06170 IPR018394 Cryptochrome/DNA photolyase, class 1 conserved site, C-terminal AL539_06170 IPR036134 AL539_06170 AL539_06170 IPR036155 AL539_06170 AL539_06175 IPR005490 L,D-transpeptidase catalytic domain AL539_06175 IPR018392 LysM domain AL539_06175 IPR038063 AL539_06175 AL539_06180 IPR006817 Lipoprotein leucine-zipper AL539_06180 IPR016367 Murein-lipoprotein AL539_06185 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site AL539_06185 IPR001650 Helicase, C-terminal AL539_06185 IPR011545 DEAD/DEAH box helicase domain AL539_06185 IPR014001 Helicase, superfamily 1/2, ATP-binding domain AL539_06185 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_06190 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain AL539_06190 IPR002470 Peptidase S9A, prolyl oligopeptidase AL539_06190 IPR023302 Peptidase S9A, N-terminal domain AL539_06190 IPR029058 Alpha/Beta hydrolase fold AL539_06195 IPR000531 TonB-dependent receptor, beta-barrel AL539_06195 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor AL539_06195 IPR011276 TonB-dependent haem/haemoglobin receptor AL539_06195 IPR012910 TonB-dependent receptor, plug AL539_06195 IPR036942 AL539_06195 AL539_06195 IPR037066 AL539_06195 AL539_06200 IPR002884 Proprotein convertase, P AL539_06200 IPR008979 Galactose-binding domain-like AL539_06205 IPR011460 Protein of unknown function DUF1566 AL539_06210 IPR011460 Protein of unknown function DUF1566 AL539_06215 IPR003660 HAMP linker domain AL539_06215 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AL539_06215 IPR004090 Chemotaxis methyl-accepting receptor AL539_06220 IPR011862 Phosphate binding protein AL539_06220 IPR024370 PBP domain AL539_06225 IPR000515 MetI-like domain AL539_06225 IPR011864 Phosphate ABC transporter, permease protein PstC AL539_06225 IPR035906 AL539_06225 AL539_06230 IPR000515 MetI-like domain AL539_06230 IPR005672 Phosphate transport system permease protein PstA AL539_06230 IPR035906 AL539_06230 AL539_06235 IPR003439 ABC transporter-like AL539_06235 IPR003593 AAA+ ATPase domain AL539_06235 IPR005670 Phosphate transport system permease protein 1 AL539_06235 IPR017871 ABC transporter, conserved site AL539_06235 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_06240 IPR000160 GGDEF domain AL539_06240 IPR029016 GAF domain-like AL539_06240 IPR029787 Nucleotide cyclase AL539_06245 IPR025738 Aerotolerance-related protein BatD AL539_06250 IPR002035 von Willebrand factor, type A AL539_06250 IPR011990 Tetratricopeptide-like helical domain AL539_06250 IPR036465 AL539_06250 AL539_06255 IPR002035 von Willebrand factor, type A AL539_06255 IPR036465 AL539_06255 AL539_06260 IPR025489 Protein of unknown function (DUF4381 AL539_06265 IPR002881 Domain of unknown function DUF58 AL539_06270 IPR011703 ATPase, AAA-3 AL539_06270 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_06275 IPR003660 HAMP linker domain AL539_06275 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AL539_06275 IPR004090 Chemotaxis methyl-accepting receptor AL539_06285 IPR000792 Transcription regulator LuxR, C-terminal AL539_06285 IPR016032 Signal transduction response regulator, C-terminal effector AL539_06285 IPR036388 AL539_06285 AL539_06290 IPR000792 Transcription regulator LuxR, C-terminal AL539_06290 IPR016032 Signal transduction response regulator, C-terminal effector AL539_06290 IPR036388 AL539_06290 AL539_06295 IPR001343 Haemolysin-type calcium-binding repeat AL539_06295 IPR011049 Serralysin-like metalloprotease, C-terminal AL539_06295 IPR018511 Hemolysin-type calcium-binding conserved site AL539_06300 IPR003439 ABC transporter-like AL539_06300 IPR003593 AAA+ ATPase domain AL539_06300 IPR010128 ATPase, type I secretion system, PrtD AL539_06300 IPR017871 ABC transporter, conserved site AL539_06300 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_06300 IPR036640 AL539_06300 AL539_06305 IPR003997 RTX secretion protein D, Gram-negative bacteria AL539_06305 IPR010129 Type I secretion membrane fusion protein, HlyD AL539_06305 IPR039562 AL539_06305 AL539_06310 IPR006685 Mechanosensitive ion channel MscS AL539_06310 IPR010920 Like-Sm (LSM) domain AL539_06315 IPR000522 ABC transporter, permease protein AL539_06315 IPR037294 AL539_06315 AL539_06320 IPR002491 ABC transporter periplasmic binding domain AL539_06325 IPR003439 ABC transporter-like AL539_06325 IPR003593 AAA+ ATPase domain AL539_06325 IPR017871 ABC transporter, conserved site AL539_06325 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_06335 IPR003439 ABC transporter-like AL539_06335 IPR003593 AAA+ ATPase domain AL539_06335 IPR011527 ABC transporter type 1, transmembrane domain AL539_06335 IPR017871 ABC transporter, conserved site AL539_06335 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_06335 IPR036640 AL539_06335 AL539_06340 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_06340 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain AL539_06340 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AL539_06340 IPR025201 Sensor protein KdpD, transmembrane domain AL539_06340 IPR036097 AL539_06340 AL539_06340 IPR036890 AL539_06340 AL539_06340 IPR038318 AL539_06340 AL539_06345 IPR001789 Signal transduction response regulator, receiver domain AL539_06345 IPR001867 Signal transduction response regulator, C-terminal AL539_06345 IPR011006 CheY-like superfamily AL539_06345 IPR016032 Signal transduction response regulator, C-terminal effector AL539_06345 IPR036388 AL539_06345 AL539_06350 IPR003148 Regulator of K+ conductance, N-terminal AL539_06350 IPR036291 AL539_06350 AL539_06350 IPR036721 AL539_06350 AL539_06355 IPR003445 Cation transporter AL539_06355 IPR004772 Potassium uptake protein TrkH family AL539_06360 IPR000847 Transcription regulator HTH, LysR AL539_06360 IPR005119 LysR, substrate-binding AL539_06360 IPR036388 AL539_06360 AL539_06360 IPR036390 AL539_06360 AL539_06365 IPR000060 BCCT transporter family AL539_06370 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit AL539_06370 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain AL539_06370 IPR017941 Rieske [2Fe-2S] iron-sulphur domain AL539_06370 IPR036922 AL539_06370 AL539_06375 IPR015590 Aldehyde dehydrogenase domain AL539_06375 IPR016160 Aldehyde dehydrogenase, cysteine active site AL539_06375 IPR016161 Aldehyde/histidinol dehydrogenase AL539_06375 IPR016162 Aldehyde dehydrogenase, N-terminal AL539_06375 IPR016163 Aldehyde dehydrogenase, C-terminal AL539_06375 IPR029510 Aldehyde dehydrogenase, glutamic acid active site AL539_06380 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain AL539_06380 IPR024935 Rubredoxin domain AL539_06380 IPR036188 AL539_06380 AL539_06385 IPR006076 FAD dependent oxidoreductase AL539_06385 IPR036188 AL539_06385 AL539_06390 IPR010424 Ethanolamine utilisation EutQ AL539_06390 IPR011051 RmlC-like cupin domain AL539_06390 IPR014710 RmlC-like jelly roll fold AL539_06395 IPR000923 Blue (type 1) copper domain AL539_06395 IPR008972 Cupredoxin AL539_06395 IPR014068 Azurin, proteobacteria AL539_06395 IPR028871 Blue (type 1) copper protein, binding site AL539_06400 IPR006439 HAD hydrolase, subfamily IA AL539_06400 IPR023198 Phosphoglycolate phosphatase, domain 2 AL539_06400 IPR023214 HAD-like domain AL539_06400 IPR036412 AL539_06400 AL539_06410 IPR002078 RNA polymerase sigma factor 54 interaction domain AL539_06410 IPR003018 GAF domain AL539_06410 IPR003593 AAA+ ATPase domain AL539_06410 IPR009057 Homeodomain-like AL539_06410 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AL539_06410 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AL539_06410 IPR025944 Sigma-54 interaction domain, conserved site AL539_06410 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_06410 IPR029016 GAF domain-like AL539_06415 IPR001279 Beta-lactamase-like AL539_06415 IPR008254 Flavodoxin/nitric oxide synthase AL539_06415 IPR023957 Anaerobic nitric oxide reductase flavorubredoxin AL539_06415 IPR024935 Rubredoxin domain AL539_06415 IPR029039 Flavoprotein-like AL539_06415 IPR036866 AL539_06415 AL539_06420 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain AL539_06420 IPR036188 AL539_06420 AL539_06425 IPR014510 Tellurite resistance predicted, YeaR AL539_06425 IPR014710 RmlC-like jelly roll fold AL539_06425 IPR015392 Domain of unknown function DUF1971 AL539_06430 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding AL539_06430 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like AL539_06430 IPR013328 Dehydrogenase, multihelical AL539_06430 IPR015815 Hydroxy monocarboxylic acid anion dehydrogenase, HIBADH-type AL539_06430 IPR029154 NADP-dependent 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain AL539_06430 IPR036291 AL539_06430 AL539_06435 IPR002226 Catalase haem-binding site AL539_06435 IPR010582 Catalase immune-responsive domain AL539_06435 IPR011614 Catalase core domain AL539_06435 IPR018028 Catalase, mono-functional, haem-containing AL539_06435 IPR020835 Catalase-like domain AL539_06435 IPR024708 Catalase active site AL539_06435 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 AL539_06435 IPR037060 AL539_06435 AL539_06440 IPR004045 Glutathione S-transferase, N-terminal AL539_06440 IPR004046 Glutathione S-transferase, C-terminal AL539_06440 IPR036249 AL539_06440 AL539_06440 IPR036282 AL539_06440 AL539_06445 IPR011032 GroES (chaperonin 10)-like AL539_06445 IPR013149 Alcohol dehydrogenase, C-terminal AL539_06445 IPR020843 Polyketide synthase, enoylreductase AL539_06445 IPR036291 AL539_06445 AL539_06450 IPR001647 DNA-binding HTH domain, TetR-type AL539_06450 IPR009057 Homeodomain-like AL539_06450 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AL539_06450 IPR036271 AL539_06450 AL539_06455 IPR007374 ASCH domain AL539_06455 IPR008314 Uncharacterised conserved protein UCP029143 AL539_06455 IPR015947 PUA-like domain AL539_06460 IPR006976 VanZ-like AL539_06465 IPR002797 Polysaccharide biosynthesis protein AL539_06465 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain AL539_06470 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain AL539_06475 IPR018831 Uncharacterised protein family NKWYS AL539_06475 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_06480 IPR007016 O-antigen ligase-related AL539_06485 IPR001296 Glycosyl transferase, family 1 AL539_06485 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain AL539_06490 IPR018831 Uncharacterised protein family NKWYS AL539_06490 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_06495 IPR003856 Lipopolysaccharide biosynthesis AL539_06495 IPR005702 Exopolysaccharide synthesis protein AL539_06495 IPR025669 AAA domain AL539_06495 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_06495 IPR032807 AL539_06495 AL539_06500 IPR003715 Polysaccharide export protein AL539_06500 IPR019554 Soluble ligand binding domain AL539_06505 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel AL539_06505 IPR018759 Protein of unknown function DUF2320 AL539_06510 IPR003362 Bacterial sugar transferase AL539_06510 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ AL539_06510 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase AL539_06510 IPR036291 AL539_06510 AL539_06515 IPR003439 ABC transporter-like AL539_06515 IPR003593 AAA+ ATPase domain AL539_06515 IPR008995 Molybdate/tungstate binding, C-terminal AL539_06515 IPR013611 Transport-associated OB, type 2 AL539_06515 IPR017871 ABC transporter, conserved site AL539_06515 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_06520 IPR006059 Bacterial extracellular solute-binding, family 1 AL539_06520 IPR006060 Maltose binding protein AL539_06520 IPR006061 Bacterial extracellular solute-binding family 1, conserved site AL539_06525 IPR000515 MetI-like domain AL539_06525 IPR029345 Maltose transport system permease protein MalF, P2 domain AL539_06525 IPR035277 AL539_06525 AL539_06525 IPR035906 AL539_06525 AL539_06530 IPR000515 MetI-like domain AL539_06530 IPR035906 AL539_06530 AL539_06540 IPR006683 Thioesterase superfamily AL539_06540 IPR029069 HotDog domain AL539_06545 IPR000620 Drug/metabolite transporter AL539_06550 IPR009057 Homeodomain-like AL539_06550 IPR011051 RmlC-like cupin domain AL539_06550 IPR018060 DNA binding HTH domain, AraC-type AL539_06550 IPR020449 Transcription regulator HTH, AraC- type AL539_06555 IPR003439 ABC transporter-like AL539_06555 IPR003593 AAA+ ATPase domain AL539_06555 IPR017871 ABC transporter, conserved site AL539_06555 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_06555 IPR036640 AL539_06555 AL539_06560 IPR003439 ABC transporter-like AL539_06560 IPR003593 AAA+ ATPase domain AL539_06560 IPR011527 ABC transporter type 1, transmembrane domain AL539_06560 IPR017871 ABC transporter, conserved site AL539_06560 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_06560 IPR033379 AL539_06560 AL539_06560 IPR036640 AL539_06560 AL539_06565 IPR000531 TonB-dependent receptor, beta-barrel AL539_06565 IPR010105 TonB-dependent siderophore receptor AL539_06565 IPR012910 TonB-dependent receptor, plug AL539_06565 IPR036942 AL539_06565 AL539_06565 IPR037066 AL539_06565 AL539_06570 IPR002491 ABC transporter periplasmic binding domain AL539_06575 IPR000522 ABC transporter, permease protein AL539_06575 IPR037294 AL539_06575 AL539_06580 IPR000522 ABC transporter, permease protein AL539_06580 IPR037294 AL539_06580 AL539_06585 IPR000834 Peptidase M14, carboxypeptidase A AL539_06590 IPR008526 Inner membrane protein YedI AL539_06595 IPR002195 Dihydroorotase, conserved site AL539_06595 IPR004721 Dihydroorotase homodimeric type AL539_06595 IPR006680 Amidohydrolase 1 AL539_06595 IPR032466 AL539_06595 AL539_06605 IPR000612 Proteolipid membrane potential modulator AL539_06610 IPR001041 2Fe-2S ferredoxin-type domain AL539_06610 IPR001433 Oxidoreductase FAD/NAD(P)-binding AL539_06610 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase AL539_06610 IPR001834 NADH:cytochrome b5 reductase (CBR) AL539_06610 IPR005302 Molybdenum cofactor sulfurase, C-terminal AL539_06610 IPR005303 MOSC, N-terminal beta barrel AL539_06610 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site AL539_06610 IPR008333 Oxidoreductase, FAD-binding domain AL539_06610 IPR011037 Pyruvate kinase-like, insert domain AL539_06610 IPR012675 Beta-grasp domain AL539_06610 IPR017938 Riboflavin synthase-like beta-barrel AL539_06610 IPR036010 AL539_06610 AL539_06610 IPR039261 AL539_06610 AL539_06615 IPR003694 NAD(+) synthetase AL539_06615 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL539_06615 IPR022310 NAD/GMP synthase AL539_06615 IPR022926 NH(3)-dependent NAD(+) synthetase AL539_06620 IPR004821 Cytidyltransferase-like domain AL539_06620 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL539_06635 IPR002123 Phospholipid/glycerol acyltransferase AL539_06640 IPR032675 AL539_06640 AL539_06645 IPR009971 Protein of unknown function DUF1496 AL539_06650 IPR005272 Conserved hypothetical protein CHP00743 AL539_06650 IPR035571 AL539_06650 AL539_06655 IPR009057 Homeodomain-like AL539_06655 IPR027402 LuxT regulator, C-terminal domain AL539_06655 IPR027404 LuxT regulator, helix hairpin domain AL539_06660 IPR003439 ABC transporter-like AL539_06660 IPR003593 AAA+ ATPase domain AL539_06660 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_06665 IPR000522 ABC transporter, permease protein AL539_06665 IPR037294 AL539_06665 AL539_06670 IPR002491 ABC transporter periplasmic binding domain AL539_06675 IPR003400 Biopolymer transport protein ExbD/TolR AL539_06680 IPR002898 MotA/TolQ/ExbB proton channel AL539_06685 IPR006260 TonB, C-terminal AL539_06685 IPR037682 AL539_06685 AL539_06690 IPR006638 Elongator protein 3/MiaB/NifB AL539_06690 IPR007197 Radical SAM AL539_06690 IPR023404 Radical SAM, alpha/beta horseshoe AL539_06690 IPR026332 Putative heme utilization radical SAM enzyme HutW AL539_06695 IPR010413 Heme utilization carrier protein HutX like AL539_06700 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain AL539_06700 IPR012349 FMN-binding split barrel AL539_06700 IPR014419 Heme utilization protein with pyridoxamine 5'-phosphate domain AL539_06705 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like AL539_06705 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type AL539_06705 IPR036451 AL539_06705 AL539_06710 IPR001789 Signal transduction response regulator, receiver domain AL539_06710 IPR002545 CheW-like protein AL539_06710 IPR011006 CheY-like superfamily AL539_06710 IPR024181 Chemotaxis response regulator CheV AL539_06710 IPR036061 AL539_06710 AL539_06720 IPR002528 Multi antimicrobial extrusion protein AL539_06725 IPR003439 ABC transporter-like AL539_06725 IPR003593 AAA+ ATPase domain AL539_06725 IPR017871 ABC transporter, conserved site AL539_06725 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_06730 IPR003439 ABC transporter-like AL539_06730 IPR003593 AAA+ ATPase domain AL539_06730 IPR017871 ABC transporter, conserved site AL539_06730 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_06735 IPR000914 Bacterial extracellular solute-binding protein, family 5 AL539_06735 IPR023765 Bacterial extracellular solute-binding protein, family 5, conserved site AL539_06735 IPR030678 AL539_06735 AL539_06740 IPR000515 MetI-like domain AL539_06740 IPR035906 AL539_06740 AL539_06745 IPR001034 HTH DeoR N-terminal domain AL539_06745 IPR014036 DeoR C-terminal sensor domain AL539_06745 IPR018356 Transcription regulator, HTH DeoR-type, conserved site AL539_06745 IPR036388 AL539_06745 AL539_06745 IPR036390 AL539_06745 AL539_06745 IPR037171 AL539_06745 AL539_06750 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site AL539_06750 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding AL539_06750 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like AL539_06750 IPR013328 Dehydrogenase, multihelical AL539_06750 IPR015815 Hydroxy monocarboxylic acid anion dehydrogenase, HIBADH-type AL539_06750 IPR029154 NADP-dependent 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain AL539_06750 IPR036291 AL539_06750 AL539_06755 IPR010737 Protein of unknown function, DUF1537 AL539_06755 IPR031475 AL539_06755 AL539_06755 IPR037051 AL539_06755 AL539_06760 IPR001303 Class II aldolase/adducin N-terminal AL539_06760 IPR036409 AL539_06760 AL539_06765 IPR013022 Xylose isomerase-like, TIM barrel domain AL539_06765 IPR026040 Hydroxypyruvate isomerase-like AL539_06765 IPR036237 AL539_06765 AL539_06770 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain AL539_06770 IPR036291 AL539_06770 AL539_06775 IPR003474 Gluconate transporter AL539_06780 IPR003735 Metal-sensitive transcriptional repressor AL539_06780 IPR038390 AL539_06780 AL539_06785 IPR011541 Nickel/cobalt transporter, high-affinity AL539_06795 IPR003660 HAMP linker domain AL539_06795 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AL539_06795 IPR029151 Periplasmic sensor domain-like AL539_06795 IPR033463 AL539_06795 AL539_06800 IPR000847 Transcription regulator HTH, LysR AL539_06800 IPR005119 LysR, substrate-binding AL539_06800 IPR036388 AL539_06800 AL539_06800 IPR036390 AL539_06800 AL539_06805 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit AL539_06805 IPR029045 ClpP/crotonase-like domain AL539_06805 IPR034733 AL539_06805 AL539_06815 IPR002169 Peptidase M9A/M9B, collagenase, bacterial AL539_06815 IPR007280 Peptidase, C-terminal, archaeal/bacterial AL539_06815 IPR013661 Peptidase M9, collagenase, N-terminal domain AL539_06820 IPR015106 Pas factor saposin domain AL539_06825 IPR003779 Carboxymuconolactone decarboxylase-like AL539_06825 IPR029032 AhpD-like AL539_06830 IPR000551 MerR-type HTH domain AL539_06830 IPR009061 DNA binding domain, putative AL539_06835 IPR006046 Alpha amylase AL539_06835 IPR006047 Glycosyl hydrolase, family 13, catalytic domain AL539_06835 IPR017853 Glycoside hydrolase, superfamily AL539_06840 IPR001845 HTH ArsR-type DNA-binding domain AL539_06840 IPR036388 AL539_06840 AL539_06840 IPR036390 AL539_06840 AL539_06850 IPR003148 Regulator of K+ conductance, N-terminal AL539_06850 IPR004771 K+/H+ exchanger AL539_06850 IPR006153 Cation/H+ exchanger AL539_06850 IPR036291 AL539_06850 AL539_06850 IPR038770 AL539_06850 AL539_06855 IPR003680 Flavodoxin-like fold AL539_06855 IPR029039 Flavoprotein-like AL539_06860 IPR006015 Universal stress protein A AL539_06860 IPR006016 UspA AL539_06860 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL539_06865 IPR003439 ABC transporter-like AL539_06865 IPR003593 AAA+ ATPase domain AL539_06865 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_06870 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain AL539_06870 IPR002470 Peptidase S9A, prolyl oligopeptidase AL539_06870 IPR002471 Peptidase S9, serine active site AL539_06870 IPR023302 Peptidase S9A, N-terminal domain AL539_06870 IPR029058 Alpha/Beta hydrolase fold AL539_06880 IPR006143 RND efflux pump, membrane fusion protein AL539_06880 IPR039562 AL539_06880 AL539_06885 IPR001036 Acriflavin resistance protein AL539_06885 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 AL539_06885 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL539_06890 IPR005017 Membrane protein, aromatic hydrocarbon degradation AL539_06900 IPR000182 GNAT domain AL539_06900 IPR016181 Acyl-CoA N-acyltransferase AL539_06910 IPR000160 GGDEF domain AL539_06910 IPR003018 GAF domain AL539_06910 IPR029016 GAF domain-like AL539_06910 IPR029787 Nucleotide cyclase AL539_06915 IPR000871 Beta-lactamase, class-A/D AL539_06915 IPR012338 Beta-lactamase/transpeptidase-like AL539_06915 IPR023650 Beta-lactamase, class-A active site AL539_06920 IPR008972 Cupredoxin AL539_06925 IPR001036 Acriflavin resistance protein AL539_06925 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA AL539_06925 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL539_06930 IPR006143 RND efflux pump, membrane fusion protein AL539_06930 IPR021647 Copper binding periplasmic protein CusF AL539_06930 IPR032317 AL539_06930 AL539_06935 IPR003423 Outer membrane efflux protein AL539_06945 IPR006478 Formate dehydrogenase, alpha subunit AL539_06945 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site AL539_06945 IPR006656 Molybdopterin oxidoreductase AL539_06945 IPR006657 Molydopterin dinucleotide-binding domain AL539_06945 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain AL539_06945 IPR009010 Aspartate decarboxylase-like domain AL539_06945 IPR009051 Alpha-helical ferredoxin AL539_06945 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL539_06945 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL539_06945 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain AL539_06945 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site AL539_06945 IPR028261 Dihydroprymidine dehydrogenase domain II AL539_06945 IPR036010 AL539_06945 AL539_06945 IPR036188 AL539_06945 AL539_06955 IPR000412 ABC-2 transporter AL539_06960 IPR003439 ABC transporter-like AL539_06960 IPR003593 AAA+ ATPase domain AL539_06960 IPR017871 ABC transporter, conserved site AL539_06960 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_06970 IPR003719 Phenazine biosynthesis PhzF protein AL539_06975 IPR005247 YbhB/YbcL AL539_06975 IPR008914 Phosphatidylethanolamine-binding protein PEBP AL539_06975 IPR036610 AL539_06975 AL539_06980 IPR009057 Homeodomain-like AL539_06980 IPR018060 DNA binding HTH domain, AraC-type AL539_06980 IPR020449 Transcription regulator HTH, AraC- type AL539_06985 IPR002657 Bile acid:sodium symporter AL539_06985 IPR004706 Arsenical-resistance protein ACR3 AL539_06985 IPR038770 AL539_06985 AL539_06990 IPR001845 HTH ArsR-type DNA-binding domain AL539_06990 IPR036388 AL539_06990 AL539_06990 IPR036390 AL539_06990 AL539_06995 IPR003680 Flavodoxin-like fold AL539_06995 IPR029039 Flavoprotein-like AL539_07000 IPR002577 Helix-turn-helix, HxlR type AL539_07000 IPR036388 AL539_07000 AL539_07000 IPR036390 AL539_07000 AL539_07010 IPR025668 Transposase DDE domain AL539_07015 IPR013740 Redoxin AL539_07015 IPR036249 AL539_07015 AL539_07020 IPR000914 Bacterial extracellular solute-binding protein, family 5 AL539_07020 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain AL539_07020 IPR030678 AL539_07020 AL539_07025 IPR000847 Transcription regulator HTH, LysR AL539_07025 IPR005119 LysR, substrate-binding AL539_07025 IPR036388 AL539_07025 AL539_07025 IPR036390 AL539_07025 AL539_07030 IPR023210 NADP-dependent oxidoreductase domain AL539_07030 IPR036812 AL539_07030 AL539_07035 IPR005624 Domain of unknown function DUF336 AL539_07035 IPR038084 AL539_07035 AL539_07045 IPR001387 Cro/C1-type helix-turn-helix domain AL539_07045 IPR010982 Lambda repressor-like, DNA-binding domain AL539_07055 IPR013059 Tryptophan/tyrosine transporter AL539_07055 IPR018227 Tryptophan/tyrosine permease AL539_07065 IPR003660 HAMP linker domain AL539_07065 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AL539_07065 IPR029151 Periplasmic sensor domain-like AL539_07065 IPR033479 AL539_07065 AL539_07070 IPR011642 Nucleoside recognition Gate AL539_07080 IPR010699 Protein of unknown function DUF1275 AL539_07085 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V AL539_07085 IPR011057 Mss4-like AL539_07095 IPR007340 Opacity-associated protein A AL539_07095 IPR011055 Duplicated hybrid motif AL539_07095 IPR016047 Peptidase M23 AL539_07100 IPR000160 GGDEF domain AL539_07100 IPR001633 EAL domain AL539_07100 IPR029787 Nucleotide cyclase AL539_07100 IPR035919 AL539_07100 AL539_07105 IPR000847 Transcription regulator HTH, LysR AL539_07105 IPR005119 LysR, substrate-binding AL539_07105 IPR036388 AL539_07105 AL539_07105 IPR036390 AL539_07105 AL539_07110 IPR004812 Drug resistance transporter Bcr/CmlA subfamily AL539_07110 IPR011701 Major facilitator superfamily AL539_07110 IPR036259 AL539_07110 AL539_07125 IPR002109 Glutaredoxin AL539_07125 IPR011767 Glutaredoxin active site AL539_07125 IPR014025 Glutaredoxin subgroup AL539_07125 IPR036249 AL539_07125 AL539_07130 IPR000620 Drug/metabolite transporter AL539_07135 IPR023614 Porin domain AL539_07140 IPR023614 Porin domain AL539_07145 IPR011234 Fumarylacetoacetase, C-terminal-related AL539_07145 IPR036663 AL539_07145 AL539_07150 IPR008407 Branched-chain amino acid transport, AzlD AL539_07155 IPR011606 Branched-chain amino acid transport, permease AL539_07160 IPR003313 AraC-type arabinose-binding/dimerisation domain AL539_07160 IPR009057 Homeodomain-like AL539_07160 IPR018060 DNA binding HTH domain, AraC-type AL539_07160 IPR018062 HTH domain AraC-type, conserved site AL539_07160 IPR037923 AL539_07160 AL539_07165 IPR001123 Lysine-type exporter protein (LYSE/YGGA) AL539_07170 IPR000182 GNAT domain AL539_07170 IPR016181 Acyl-CoA N-acyltransferase AL539_07175 IPR005841 Alpha-D-phosphohexomutase superfamily AL539_07175 IPR005843 Alpha-D-phosphohexomutase, C-terminal AL539_07175 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I AL539_07175 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II AL539_07175 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III AL539_07175 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III AL539_07175 IPR016066 Alpha-D-phosphohexomutase, conserved site AL539_07175 IPR036900 AL539_07175 AL539_07180 IPR001505 Copper centre Cu(A) AL539_07180 IPR002429 Cytochrome c oxidase subunit II C-terminal AL539_07180 IPR008972 Cupredoxin AL539_07180 IPR009056 Cytochrome c-like domain AL539_07180 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain AL539_07180 IPR014222 Cytochrome c oxidase, subunit II AL539_07180 IPR036257 AL539_07180 AL539_07180 IPR036909 AL539_07180 AL539_07185 IPR000883 Cytochrome c oxidase subunit I AL539_07185 IPR014241 Cytochrome c oxidase, subunit I bacterial type AL539_07185 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site AL539_07185 IPR036927 AL539_07185 AL539_07190 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 AL539_07190 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain AL539_07195 IPR000298 Cytochrome c oxidase subunit III domain AL539_07195 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle AL539_07195 IPR035973 AL539_07195 AL539_07200 IPR021313 Protein of unknown function DUF2909 AL539_07205 IPR002994 Surfeit locus 1/Shy1 AL539_07215 IPR003780 COX15/CtaA family AL539_07220 IPR000537 UbiA prenyltransferase family AL539_07220 IPR006369 Protohaem IX farnesyltransferase AL539_07220 IPR030470 AL539_07220 AL539_07225 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal AL539_07225 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain AL539_07230 IPR012336 Thioredoxin-like fold AL539_07230 IPR036249 AL539_07230 AL539_07235 IPR006664 Outer membrane protein, bacterial AL539_07235 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal AL539_07235 IPR036737 AL539_07235 AL539_07240 IPR002109 Glutaredoxin AL539_07240 IPR036249 AL539_07240 AL539_07250 IPR009822 YaeQ AL539_07250 IPR011335 Restriction endonuclease type II-like AL539_07250 IPR038590 AL539_07250 AL539_07255 IPR002059 Cold-shock protein, DNA-binding AL539_07255 IPR011129 Cold shock protein AL539_07255 IPR012156 Cold shock, CspA AL539_07255 IPR012340 Nucleic acid-binding, OB-fold AL539_07255 IPR019844 Cold-shock conserved site AL539_07260 IPR005589 Protein of unknown function DUF331 AL539_07265 IPR000160 GGDEF domain AL539_07265 IPR001638 Extracellular solute-binding protein, family 3 AL539_07265 IPR029787 Nucleotide cyclase AL539_07270 IPR000943 RNA polymerase sigma-70 AL539_07270 IPR007627 RNA polymerase sigma-70 region 2 AL539_07270 IPR007630 RNA polymerase sigma-70 region 4 AL539_07270 IPR009042 RNA polymerase sigma-70 region 1.2 AL539_07270 IPR013324 RNA polymerase sigma factor, region 3/4 AL539_07270 IPR013325 RNA polymerase sigma factor, region 2 AL539_07270 IPR014284 RNA polymerase sigma-70 like domain AL539_07270 IPR036388 AL539_07270 AL539_07280 IPR003439 ABC transporter-like AL539_07280 IPR003593 AAA+ ATPase domain AL539_07280 IPR011527 ABC transporter type 1, transmembrane domain AL539_07280 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_07280 IPR036640 AL539_07280 AL539_07285 IPR003439 ABC transporter-like AL539_07285 IPR003593 AAA+ ATPase domain AL539_07285 IPR011527 ABC transporter type 1, transmembrane domain AL539_07285 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_07285 IPR036640 AL539_07285 AL539_07290 IPR003423 Outer membrane efflux protein AL539_07295 IPR001789 Signal transduction response regulator, receiver domain AL539_07295 IPR011006 CheY-like superfamily AL539_07300 IPR003997 RTX secretion protein D, Gram-negative bacteria AL539_07300 IPR010129 Type I secretion membrane fusion protein, HlyD AL539_07320 IPR003660 HAMP linker domain AL539_07320 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AL539_07320 IPR024478 4HB MCP domain AL539_07325 IPR002177 DNA-binding protein Dps AL539_07325 IPR008331 Ferritin/DPS protein domain AL539_07325 IPR009078 Ferritin-like superfamily AL539_07325 IPR012347 Ferritin-related AL539_07325 IPR023188 DNA-binding protein Dps, conserved site AL539_07330 IPR006439 HAD hydrolase, subfamily IA AL539_07330 IPR023214 HAD-like domain AL539_07330 IPR036412 AL539_07330 AL539_07335 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase AL539_07335 IPR011042 Six-bladed beta-propeller, TolB-like AL539_07335 IPR012938 Glucose/Sorbosone dehydrogenase AL539_07340 IPR001670 Alcohol dehydrogenase, iron-type AL539_07340 IPR018211 Alcohol dehydrogenase, iron-type, conserved site AL539_07345 IPR026041 Enhancing lycopene biosynthesis protein 2 AL539_07345 IPR029062 Class I glutamine amidotransferase-like AL539_07350 IPR000620 Drug/metabolite transporter AL539_07355 IPR002524 Cation efflux protein AL539_07355 IPR027469 Cation efflux protein transmembrane domain AL539_07360 IPR000847 Transcription regulator HTH, LysR AL539_07360 IPR005119 LysR, substrate-binding AL539_07360 IPR036388 AL539_07360 AL539_07360 IPR036390 AL539_07360 AL539_07365 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like AL539_07370 IPR000873 AMP-dependent synthetase/ligase AL539_07370 IPR005914 Acetoacetyl-CoA synthase AL539_07370 IPR020845 AMP-binding, conserved site AL539_07375 IPR005960 Phenylalanine-4-hydroxylase, monomeric form AL539_07375 IPR018301 Aromatic amino acid hydroxylase, iron/copper binding site AL539_07375 IPR019774 Aromatic amino acid hydroxylase, C-terminal AL539_07375 IPR036329 AL539_07375 AL539_07375 IPR036951 AL539_07375 AL539_07380 IPR001533 Transcriptional coactivator/pterin dehydratase AL539_07380 IPR036428 AL539_07380 AL539_07385 IPR015943 WD40/YVTN repeat-like-containing domain AL539_07390 IPR014984 HopJ type III effector protein AL539_07390 IPR038604 AL539_07390 AL539_07395 IPR010710 Protein of unknown function DUF1289 AL539_07395 IPR032720 AL539_07395 AL539_07400 IPR024530 Protein of unknown function DUF3820 AL539_07405 IPR006118 Recombinase, conserved site AL539_07405 IPR006119 Resolvase, N-terminal AL539_07405 IPR011109 Recombinase AL539_07405 IPR036162 AL539_07405 AL539_07415 IPR000525 Initiator Rep protein AL539_07415 IPR036388 AL539_07415 AL539_07415 IPR036390 AL539_07415 AL539_07440 IPR004473 Restriction endonuclease, type I, HsdR AL539_07440 IPR006935 Helicase/UvrB domain AL539_07440 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal AL539_07440 IPR014001 Helicase, superfamily 1/2, ATP-binding domain AL539_07440 IPR021810 Protein of unknown function DUF3387 AL539_07440 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_07455 IPR000055 Restriction endonuclease, type I, HsdS AL539_07460 IPR003356 DNA methylase, adenine-specific AL539_07460 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain AL539_07460 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like AL539_07460 IPR038333 AL539_07460 AL539_07465 IPR002104 Integrase, catalytic AL539_07465 IPR011010 DNA breaking-rejoining enzyme, catalytic core AL539_07465 IPR013762 Integrase-like, catalytic core AL539_07500 IPR002765 Uncharacterised protein family UPF0145 AL539_07500 IPR035439 AL539_07500 AL539_07515 IPR022104 Protein of unknown function DUF3644 AL539_07580 IPR018668 Protein of unknown function DUF2132 AL539_07580 IPR036361 AL539_07580 AL539_07585 IPR021794 Protein of unknown function DUF3360 AL539_07590 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AL539_07590 IPR006653 Tryptophan synthase, beta chain, conserved site AL539_07590 IPR006654 Tryptophan synthase, beta chain AL539_07590 IPR023026 Tryptophan synthase beta chain/beta chain-like AL539_07590 IPR036052 AL539_07590 AL539_07600 IPR002059 Cold-shock protein, DNA-binding AL539_07600 IPR011129 Cold shock protein AL539_07600 IPR012156 Cold shock, CspA AL539_07600 IPR012340 Nucleic acid-binding, OB-fold AL539_07600 IPR019844 Cold-shock conserved site AL539_07610 IPR000816 Peptidase C15, pyroglutamyl peptidase I AL539_07610 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like AL539_07610 IPR029762 Pyroglutamyl peptidase I, bacterial-type AL539_07610 IPR033693 AL539_07610 AL539_07610 IPR033694 AL539_07610 AL539_07610 IPR036440 AL539_07610 AL539_07620 IPR003495 CobW/HypB/UreG domain AL539_07620 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AL539_07620 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_07625 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site AL539_07625 IPR001650 Helicase, C-terminal AL539_07625 IPR011545 DEAD/DEAH box helicase domain AL539_07625 IPR014001 Helicase, superfamily 1/2, ATP-binding domain AL539_07625 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_07635 IPR023696 Ureohydrolase domain AL539_07640 IPR013196 Helix-turn-helix, type 11 AL539_07640 IPR014757 Transcription regulator IclR, C-terminal AL539_07640 IPR029016 GAF domain-like AL539_07640 IPR036388 AL539_07640 AL539_07640 IPR036390 AL539_07640 AL539_07645 IPR001633 EAL domain AL539_07645 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain AL539_07645 IPR035919 AL539_07645 AL539_07650 IPR003439 ABC transporter-like AL539_07650 IPR003593 AAA+ ATPase domain AL539_07650 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_07655 IPR000014 PAS domain AL539_07655 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AL539_07655 IPR013655 PAS fold-3 AL539_07655 IPR035965 AL539_07655 AL539_07665 IPR002539 MaoC-like domain AL539_07665 IPR029069 HotDog domain AL539_07670 IPR011862 Phosphate binding protein AL539_07670 IPR024370 PBP domain AL539_07675 IPR021388 Bacteriophage 933W, L0084 AL539_07680 IPR009057 Homeodomain-like AL539_07680 IPR018060 DNA binding HTH domain, AraC-type AL539_07680 IPR018062 HTH domain AraC-type, conserved site AL539_07680 IPR020449 Transcription regulator HTH, AraC- type AL539_07680 IPR037923 AL539_07680 AL539_07685 IPR001900 AL539_07685 AL539_07685 IPR003029 Ribosomal protein S1, RNA-binding domain AL539_07685 IPR004476 Ribonuclease II/ribonuclease R AL539_07685 IPR011129 Cold shock protein AL539_07685 IPR011804 Ribonuclease II AL539_07685 IPR012340 Nucleic acid-binding, OB-fold AL539_07685 IPR013223 Ribonuclease B, N-terminal OB domain AL539_07685 IPR022966 Ribonuclease II/R, conserved site AL539_07685 IPR022967 RNA-binding domain, S1 AL539_07690 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site AL539_07690 IPR001650 Helicase, C-terminal AL539_07690 IPR005580 DbpA, RNA-binding AL539_07690 IPR011545 DEAD/DEAH box helicase domain AL539_07690 IPR012677 Nucleotide-binding, alpha-beta plait AL539_07690 IPR014001 Helicase, superfamily 1/2, ATP-binding domain AL539_07690 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_07690 IPR028618 ATP-dependent RNA helicase DeaD AL539_07705 IPR000890 Aliphatic acid kinase, short-chain AL539_07705 IPR004372 Acetate/Proprionate kinase AL539_07705 IPR023865 Aliphatic acid kinase, short-chain, conserved site AL539_07710 IPR000847 Transcription regulator HTH, LysR AL539_07710 IPR005119 LysR, substrate-binding AL539_07710 IPR036388 AL539_07710 AL539_07710 IPR036390 AL539_07710 AL539_07715 IPR002925 Dienelactone hydrolase AL539_07715 IPR029058 Alpha/Beta hydrolase fold AL539_07720 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain AL539_07720 IPR029058 Alpha/Beta hydrolase fold AL539_07730 IPR029058 Alpha/Beta hydrolase fold AL539_07735 IPR002781 Transmembrane protein TauE like AL539_07740 IPR003313 AraC-type arabinose-binding/dimerisation domain AL539_07740 IPR009057 Homeodomain-like AL539_07740 IPR011051 RmlC-like cupin domain AL539_07740 IPR018060 DNA binding HTH domain, AraC-type AL539_07740 IPR020449 Transcription regulator HTH, AraC- type AL539_07745 IPR014955 Protein of unknown function DUF1826 AL539_07750 IPR002481 Ferric-uptake regulator AL539_07750 IPR036388 AL539_07750 AL539_07750 IPR036390 AL539_07750 AL539_07755 IPR002195 Dihydroorotase, conserved site AL539_07755 IPR006680 Amidohydrolase 1 AL539_07755 IPR011059 Metal-dependent hydrolase, composite domain AL539_07755 IPR032466 AL539_07755 AL539_07760 IPR001451 Bacterial transferase hexapeptide repeat AL539_07760 IPR011004 Trimeric LpxA-like AL539_07765 IPR003495 CobW/HypB/UreG domain AL539_07765 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_07770 IPR007036 Succinylglutamate desuccinylase/aspartoacylase AL539_07770 IPR016708 Aspartoacylase AL539_07775 IPR007340 Opacity-associated protein A AL539_07775 IPR011055 Duplicated hybrid motif AL539_07775 IPR016047 Peptidase M23 AL539_07785 IPR003495 CobW/HypB/UreG domain AL539_07785 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AL539_07785 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_07790 IPR003495 CobW/HypB/UreG domain AL539_07790 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AL539_07790 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_07795 IPR000962 Zinc finger, DksA/TraR C4-type AL539_07795 IPR037187 AL539_07795 AL539_07805 IPR002771 Multiple antibiotic resistance (MarC)-related AL539_07810 IPR020948 Phosphate-starvation-induced PsiE-like AL539_07820 IPR000014 PAS domain AL539_07820 IPR001610 PAC motif AL539_07820 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AL539_07820 IPR013655 PAS fold-3 AL539_07820 IPR035965 AL539_07820 AL539_07825 IPR000620 Drug/metabolite transporter AL539_07830 IPR000138 Hydroxymethylglutaryl-CoA lyase, active site AL539_07830 IPR000891 Pyruvate carboxyltransferase AL539_07830 IPR013785 Aldolase-type TIM barrel AL539_07835 IPR001753 Crotonase superfamily AL539_07835 IPR014748 Crontonase, C-terminal AL539_07835 IPR029045 ClpP/crotonase-like domain AL539_07840 IPR029045 ClpP/crotonase-like domain AL539_07840 IPR034733 AL539_07840 AL539_07845 IPR006089 Acyl-CoA dehydrogenase, conserved site AL539_07845 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AL539_07845 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AL539_07845 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain AL539_07845 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AL539_07845 IPR036250 AL539_07845 AL539_07845 IPR037069 AL539_07845 AL539_07850 IPR000551 MerR-type HTH domain AL539_07850 IPR009061 DNA binding domain, putative AL539_07850 IPR015358 Transcription regulator MerR, DNA binding AL539_07855 IPR002155 Thiolase AL539_07855 IPR016039 Thiolase-like AL539_07855 IPR020610 Thiolase, active site AL539_07855 IPR020615 Thiolase, acyl-enzyme intermediate active site AL539_07855 IPR020616 Thiolase, N-terminal AL539_07855 IPR020617 Thiolase, C-terminal AL539_07860 IPR010061 Methylmalonate-semialdehyde dehydrogenase AL539_07860 IPR015590 Aldehyde dehydrogenase domain AL539_07860 IPR016160 Aldehyde dehydrogenase, cysteine active site AL539_07860 IPR016161 Aldehyde/histidinol dehydrogenase AL539_07860 IPR016162 Aldehyde dehydrogenase, N-terminal AL539_07860 IPR016163 Aldehyde dehydrogenase, C-terminal AL539_07865 IPR006089 Acyl-CoA dehydrogenase, conserved site AL539_07865 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AL539_07865 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AL539_07865 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain AL539_07865 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AL539_07865 IPR036250 AL539_07865 AL539_07865 IPR037069 AL539_07865 AL539_07870 IPR001753 Crotonase superfamily AL539_07870 IPR014748 Crontonase, C-terminal AL539_07870 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site AL539_07870 IPR029045 ClpP/crotonase-like domain AL539_07875 IPR029045 ClpP/crotonase-like domain AL539_07875 IPR032259 AL539_07875 AL539_07880 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site AL539_07880 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding AL539_07880 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like AL539_07880 IPR011548 3-hydroxyisobutyrate dehydrogenase AL539_07880 IPR013328 Dehydrogenase, multihelical AL539_07880 IPR015815 Hydroxy monocarboxylic acid anion dehydrogenase, HIBADH-type AL539_07880 IPR029154 NADP-dependent 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain AL539_07880 IPR036291 AL539_07880 AL539_07885 IPR002347 Glucose/ribitol dehydrogenase AL539_07885 IPR020904 Short-chain dehydrogenase/reductase, conserved site AL539_07885 IPR036291 AL539_07885 AL539_07890 IPR002429 Cytochrome c oxidase subunit II C-terminal AL539_07890 IPR006333 Cytochrome o ubiquinol oxidase subunit II AL539_07890 IPR008972 Cupredoxin AL539_07890 IPR010514 COX aromatic rich motif AL539_07890 IPR036257 AL539_07890 AL539_07895 IPR000883 Cytochrome c oxidase subunit I AL539_07895 IPR014207 Cytochrome o ubiquinol oxidase, subunit I AL539_07895 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site AL539_07895 IPR036927 AL539_07895 AL539_07900 IPR000298 Cytochrome c oxidase subunit III domain AL539_07900 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle AL539_07900 IPR014206 Cytochrome o ubiquinol oxidase, subunit III AL539_07900 IPR035973 AL539_07900 AL539_07905 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes AL539_07905 IPR014210 Cytochrome o ubiquinol oxidase subunit IV AL539_07910 IPR000537 UbiA prenyltransferase family AL539_07910 IPR006369 Protohaem IX farnesyltransferase AL539_07910 IPR030470 AL539_07910 AL539_07915 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal AL539_07915 IPR013785 Aldolase-type TIM barrel AL539_07920 IPR000847 Transcription regulator HTH, LysR AL539_07920 IPR005119 LysR, substrate-binding AL539_07920 IPR036388 AL539_07920 AL539_07920 IPR036390 AL539_07920 AL539_07925 IPR006175 YjgF/Yer057p/UK114 family AL539_07925 IPR035959 AL539_07925 AL539_07930 IPR015590 Aldehyde dehydrogenase domain AL539_07930 IPR016161 Aldehyde/histidinol dehydrogenase AL539_07930 IPR016162 Aldehyde dehydrogenase, N-terminal AL539_07930 IPR016163 Aldehyde dehydrogenase, C-terminal AL539_07935 IPR008257 Renal dipeptidase family AL539_07935 IPR032466 AL539_07935 AL539_07940 IPR000060 BCCT transporter family AL539_07950 IPR022201 Protein of unknown function DUF3726 AL539_07955 IPR032710 AL539_07955 AL539_07955 IPR037401 AL539_07955 AL539_07960 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain AL539_07970 IPR003439 ABC transporter-like AL539_07970 IPR003593 AAA+ ATPase domain AL539_07970 IPR017871 ABC transporter, conserved site AL539_07970 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_07970 IPR030679 AL539_07970 AL539_07975 IPR001320 Ionotropic glutamate receptor AL539_07975 IPR001638 Extracellular solute-binding protein, family 3 AL539_07975 IPR005768 Lysine-arginine-ornithine-binding periplasmic protein AL539_07975 IPR018313 Extracellular solute-binding protein, family 3, conserved site AL539_07980 IPR000515 MetI-like domain AL539_07980 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family AL539_07980 IPR035906 AL539_07980 AL539_07985 IPR000515 MetI-like domain AL539_07985 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family AL539_07985 IPR035906 AL539_07985 AL539_07990 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal AL539_07990 IPR015889 Intradiol ring-cleavage dioxygenase, core AL539_07995 IPR000847 Transcription regulator HTH, LysR AL539_07995 IPR005119 LysR, substrate-binding AL539_07995 IPR036388 AL539_07995 AL539_07995 IPR036390 AL539_07995 AL539_08000 IPR004045 Glutathione S-transferase, N-terminal AL539_08000 IPR036249 AL539_08000 AL539_08000 IPR036282 AL539_08000 AL539_08005 IPR002818 ThiJ/PfpI AL539_08005 IPR029062 Class I glutamine amidotransferase-like AL539_08010 IPR000847 Transcription regulator HTH, LysR AL539_08010 IPR005119 LysR, substrate-binding AL539_08010 IPR036388 AL539_08010 AL539_08010 IPR036390 AL539_08010 AL539_08015 IPR036188 AL539_08015 AL539_08020 IPR001308 Electron transfer flavoprotein, alpha subunit AL539_08020 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL539_08020 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal AL539_08020 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal AL539_08020 IPR018206 Electron transfer flavoprotein, alpha subunit, C-terminal, conserved site AL539_08020 IPR029035 DHS-like NAD/FAD-binding domain AL539_08025 IPR000089 Biotin/lipoyl attachment AL539_08025 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain AL539_08025 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site AL539_08025 IPR004167 E3 binding AL539_08025 IPR011053 Single hybrid motif AL539_08025 IPR023213 Chloramphenicol acetyltransferase-like domain AL539_08025 IPR036625 AL539_08025 AL539_08030 IPR005475 Transketolase-like, pyrimidine-binding domain AL539_08030 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II AL539_08030 IPR029061 Thiamin diphosphate-binding fold AL539_08030 IPR033248 AL539_08030 AL539_08035 IPR001017 Dehydrogenase, E1 component AL539_08035 IPR017596 Pyruvate dehydrogenase E1 component subunit alpha/BCKADH E1-alpha AL539_08035 IPR029061 Thiamin diphosphate-binding fold AL539_08040 IPR014980 Dopa 4,5-dioxygenase AL539_08040 IPR023389 DOPA-like domain AL539_08050 IPR013126 Heat shock protein 70 family AL539_08050 IPR018181 Heat shock protein 70, conserved site AL539_08055 IPR007410 DR1885-like metal-binding protein AL539_08055 IPR036182 AL539_08055 AL539_08090 IPR001789 Signal transduction response regulator, receiver domain AL539_08090 IPR001867 Signal transduction response regulator, C-terminal AL539_08090 IPR011006 CheY-like superfamily AL539_08090 IPR036388 AL539_08090 AL539_08095 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain AL539_08095 IPR036097 AL539_08095 AL539_08095 IPR036890 AL539_08095 AL539_08100 IPR010499 Bacterial transcription activator, effector binding AL539_08100 IPR011256 Regulatory factor, effector binding domain AL539_08100 IPR019587 Polyketide cyclase/dehydrase AL539_08100 IPR023393 START-like domain AL539_08100 IPR029442 GyrI-like small molecule binding domain AL539_08110 IPR000209 Peptidase S8/S53 domain AL539_08110 IPR002884 Proprotein convertase, P AL539_08110 IPR008979 Galactose-binding domain-like AL539_08110 IPR015500 Peptidase S8, subtilisin-related AL539_08110 IPR022398 Peptidase S8, subtilisin, His-active site AL539_08110 IPR023827 Peptidase S8, subtilisin, Asp-active site AL539_08110 IPR023828 Peptidase S8, subtilisin, Ser-active site AL539_08110 IPR036852 AL539_08110 AL539_08120 IPR000160 GGDEF domain AL539_08120 IPR011990 Tetratricopeptide-like helical domain AL539_08120 IPR019734 Tetratricopeptide repeat AL539_08120 IPR029787 Nucleotide cyclase AL539_08130 IPR018227 Tryptophan/tyrosine permease AL539_08135 IPR000182 GNAT domain AL539_08135 IPR016181 Acyl-CoA N-acyltransferase AL539_08140 IPR006656 Molybdopterin oxidoreductase AL539_08140 IPR006657 Molydopterin dinucleotide-binding domain AL539_08140 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain AL539_08140 IPR007419 BFD-like [2Fe-2S]-binding domain AL539_08140 IPR009010 Aspartate decarboxylase-like domain AL539_08145 IPR000878 Tetrapyrrole methylase AL539_08145 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site AL539_08145 IPR006366 Uroporphyrin-III C-methyltransferase AL539_08145 IPR014776 Tetrapyrrole methylase, subdomain 2 AL539_08145 IPR014777 Tetrapyrrole methylase, subdomain 1 AL539_08145 IPR035996 AL539_08145 AL539_08150 IPR000312 Glycosyl transferase, family 3 AL539_08150 IPR017459 Glycosyl transferase family 3, N-terminal domain AL539_08150 IPR035902 AL539_08150 AL539_08150 IPR036320 AL539_08150 AL539_08155 IPR002925 Dienelactone hydrolase AL539_08155 IPR029058 Alpha/Beta hydrolase fold AL539_08160 IPR005561 ANTAR domain AL539_08160 IPR011006 CheY-like superfamily AL539_08160 IPR036388 AL539_08160 AL539_08185 IPR000515 MetI-like domain AL539_08185 IPR035906 AL539_08185 AL539_08190 IPR003439 ABC transporter-like AL539_08190 IPR003593 AAA+ ATPase domain AL539_08190 IPR005890 Nitrate transport ATP-binding subunit C/D AL539_08190 IPR017871 ABC transporter, conserved site AL539_08190 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_08195 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain AL539_08195 IPR006066 Nitrite/sulphite reductase iron-sulphur/siroheam-binding site AL539_08195 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain AL539_08195 IPR007419 BFD-like [2Fe-2S]-binding domain AL539_08195 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB AL539_08195 IPR017121 Nitrite reductase [NAD(P)H], large subunit AL539_08195 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain AL539_08195 IPR036136 AL539_08195 AL539_08195 IPR036188 AL539_08195 AL539_08200 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD AL539_08200 IPR036922 AL539_08200 AL539_08205 IPR005175 Domain of unknown function DUF296 AL539_08210 IPR001647 DNA-binding HTH domain, TetR-type AL539_08210 IPR009057 Homeodomain-like AL539_08210 IPR036271 AL539_08210 AL539_08215 IPR004045 Glutathione S-transferase, N-terminal AL539_08215 IPR004046 Glutathione S-transferase, C-terminal AL539_08215 IPR036249 AL539_08215 AL539_08215 IPR036282 AL539_08215 AL539_08225 IPR001789 Signal transduction response regulator, receiver domain AL539_08225 IPR001932 Protein phosphatase 2C (PP2C)-like domain AL539_08225 IPR011006 CheY-like superfamily AL539_08225 IPR036457 AL539_08225 AL539_08230 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_08230 IPR036890 AL539_08230 AL539_08240 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain AL539_08240 IPR036641 AL539_08240 AL539_08245 IPR000719 Protein kinase domain AL539_08245 IPR008271 Serine/threonine-protein kinase, active site AL539_08245 IPR011009 Protein kinase-like domain AL539_08250 IPR000253 Forkhead-associated (FHA) domain AL539_08250 IPR008984 SMAD/FHA domain AL539_08250 IPR017735 Type VI secretion system, FHA domain-containing protein AL539_08255 IPR017734 Type VI secretion system, lipoprotein SciN AL539_08255 IPR038706 AL539_08255 AL539_08265 IPR001633 EAL domain AL539_08265 IPR035919 AL539_08265 AL539_08270 IPR019106 Type-F conjugative transfer system pilin assembly protein TrbC AL539_08275 IPR019533 Peptidase S26 AL539_08275 IPR036286 AL539_08275 AL539_08290 IPR002559 Transposase, IS4-like AL539_08290 IPR025161 Putative transposase IS4/IS5 family AL539_08300 IPR009094 Disulphide bond isomerase, DsbC, N-terminal AL539_08300 IPR012336 Thioredoxin-like fold AL539_08300 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal AL539_08300 IPR036249 AL539_08300 AL539_08305 IPR022038 Bacterial Ig-like domain AL539_08305 IPR025429 Domain of unknown function DUF4165 AL539_08310 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 AL539_08315 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 AL539_08320 IPR014118 Type IV conjugative transfer system protein TraV AL539_08325 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI AL539_08330 IPR010563 Pilus assembly TraK AL539_08335 IPR007973 Pilus assembly TraE AL539_08340 IPR009838 Type IV conjugative transfer system, protein TraL AL539_08350 IPR022266 Integrating conjugative element protein, PFL4697-type AL539_08360 IPR022458 Conjugative coupling factor TraG/TraD AL539_08360 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_08360 IPR032689 AL539_08360 AL539_08365 IPR011119 Uncharacterised domain, helicase/relaxase, putative AL539_08385 IPR003601 DNA topoisomerase, type IA, domain 2 AL539_08385 IPR003602 DNA topoisomerase, type IA, DNA-binding domain AL539_08385 IPR005738 DNA topoisomerase III AL539_08385 IPR006171 Toprim domain AL539_08385 IPR013497 DNA topoisomerase, type IA, central AL539_08385 IPR013498 DNA topoisomerase, type IA, zn finger AL539_08385 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 AL539_08385 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 AL539_08385 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 AL539_08385 IPR023405 DNA topoisomerase, type IA, core domain AL539_08385 IPR023406 DNA topoisomerase, type IA, active site AL539_08395 IPR025668 Transposase DDE domain AL539_08465 IPR003804 L-lactate permease AL539_08470 IPR004017 Cysteine-rich domain AL539_08475 IPR003741 Domain of unknown function DUF162 AL539_08475 IPR004452 4Fe-4S binding protein AL539_08475 IPR009051 Alpha-helical ferredoxin AL539_08475 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL539_08475 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL539_08475 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain AL539_08475 IPR024569 4Fe-4S binding protein, C-terminal AL539_08475 IPR037171 AL539_08475 AL539_08480 IPR003741 Domain of unknown function DUF162 AL539_08480 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain AL539_08480 IPR037171 AL539_08480 AL539_08485 IPR000847 Transcription regulator HTH, LysR AL539_08485 IPR005119 LysR, substrate-binding AL539_08485 IPR036388 AL539_08485 AL539_08485 IPR036390 AL539_08485 AL539_08490 IPR000014 PAS domain AL539_08490 IPR013655 PAS fold-3 AL539_08490 IPR035965 AL539_08490 AL539_08500 IPR001584 Integrase, catalytic core AL539_08500 IPR009057 Homeodomain-like AL539_08500 IPR012337 Ribonuclease H-like domain AL539_08500 IPR025246 Transposase IS30-like HTH domain AL539_08500 IPR036397 AL539_08500 AL539_08545 IPR017162 Uncharacterised conserved protein UCP037266 AL539_08545 IPR036388 AL539_08545 AL539_08550 IPR003115 ParB/Sulfiredoxin AL539_08550 IPR004437 ParB/RepB/Spo0J partition protein family AL539_08550 IPR013741 Transcriptional repressor protein KorB AL539_08550 IPR036086 AL539_08550 AL539_08555 IPR025669 AAA domain AL539_08555 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_08560 IPR002725 Protein of unknown function DUF45 AL539_08565 IPR004473 Restriction endonuclease, type I, HsdR AL539_08565 IPR006935 Helicase/UvrB domain AL539_08565 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal AL539_08565 IPR014001 Helicase, superfamily 1/2, ATP-binding domain AL539_08565 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_08575 IPR000055 Restriction endonuclease, type I, HsdS AL539_08580 IPR003356 DNA methylase, adenine-specific AL539_08580 IPR004546 Restriction endonuclease, type I, HsdM AL539_08580 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain AL539_08580 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like AL539_08580 IPR038333 AL539_08580 AL539_08585 IPR014942 Protein of unknown function DUF1814 AL539_08595 IPR002104 Integrase, catalytic AL539_08595 IPR011010 DNA breaking-rejoining enzyme, catalytic core AL539_08595 IPR013762 Integrase-like, catalytic core AL539_08605 IPR006597 Sel1-like AL539_08605 IPR011990 Tetratricopeptide-like helical domain AL539_08610 IPR021139 NYN domain, limkain-b1-type AL539_08610 IPR025605 OST-HTH/LOTUS domain AL539_08630 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_08680 IPR001826 RHS protein AL539_08680 IPR022385 Rhs repeat-associated core AL539_08690 IPR001826 RHS protein AL539_08690 IPR006530 YD repeat AL539_08690 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like AL539_08690 IPR022385 Rhs repeat-associated core AL539_08690 IPR031325 AL539_08690 AL539_08695 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_08705 IPR022687 Iron dependent repressor, N-terminal AL539_08705 IPR036388 AL539_08705 AL539_08705 IPR036390 AL539_08705 AL539_08710 IPR009057 Homeodomain-like AL539_08710 IPR038717 AL539_08710 AL539_08750 IPR002071 Thermonuclease active site AL539_08750 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold AL539_08750 IPR035437 AL539_08750 AL539_08765 IPR012336 Thioredoxin-like fold AL539_08765 IPR036249 AL539_08765 AL539_08770 IPR002142 Peptidase S49 AL539_08770 IPR004635 Peptidase S49, SppA AL539_08770 IPR029045 ClpP/crotonase-like domain AL539_08840 IPR007944 Flagellar transcriptional activator FlhC AL539_08845 IPR036194 AL539_08845 AL539_08850 IPR008258 Lytic transglycosylase-like SLT domain AL539_08850 IPR023346 Lysozyme-like domain AL539_08855 IPR010982 Lambda repressor-like, DNA-binding domain AL539_08855 IPR038722 AL539_08855 AL539_08865 IPR012931 TraG-like, N-terminal AL539_08870 IPR010927 Type IV conjugative transfer system protein TraH AL539_08875 IPR014111 Type IV conjugative transfer system protein TraF AL539_08875 IPR036249 AL539_08875 AL539_08875 IPR039555 AL539_08875 AL539_08880 IPR014017 DNA helicase, UvrD-like, C-terminal AL539_08880 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_08880 IPR034739 AL539_08880 AL539_08885 IPR011460 Protein of unknown function DUF1566 AL539_08890 IPR003644 Na-Ca exchanger/integrin-beta4 AL539_08890 IPR011460 Protein of unknown function DUF1566 AL539_08890 IPR038081 AL539_08890 AL539_08905 IPR028005 N-acetyltransferase ESCO, zinc-finger AL539_08910 IPR008865 DNA replication terminus site-binding protein AL539_08910 IPR036381 AL539_08910 AL539_08910 IPR036384 AL539_08910 AL539_08920 IPR002611 IstB-like ATP-binding protein AL539_08920 IPR003593 AAA+ ATPase domain AL539_08920 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_08920 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein AL539_08925 IPR004291 Transposase, IS66 AL539_08925 IPR024463 Transposase TnpC, homeodomain AL539_08925 IPR024474 Zinc-finger binding domain of transposase IS66 AL539_08925 IPR039552 AL539_08925 AL539_08930 IPR008878 Transposase IS66, Orf2 AL539_08950 IPR002104 Integrase, catalytic AL539_08950 IPR011010 DNA breaking-rejoining enzyme, catalytic core AL539_08950 IPR013762 Integrase-like, catalytic core AL539_08960 IPR011010 DNA breaking-rejoining enzyme, catalytic core AL539_08970 IPR009476 Protein of unknown function DUF1097 AL539_08975 IPR009215 TIM-barrel domain, IGPS-like AL539_08975 IPR013785 Aldolase-type TIM barrel AL539_08975 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain AL539_08980 IPR008322 Uncharacterised protein family UPF0261 AL539_08985 IPR001647 DNA-binding HTH domain, TetR-type AL539_08985 IPR009057 Homeodomain-like AL539_08990 IPR015927 Peptidase S24/S26A/S26B/S26C AL539_08990 IPR036286 AL539_08990 AL539_08995 IPR002104 Integrase, catalytic AL539_08995 IPR011010 DNA breaking-rejoining enzyme, catalytic core AL539_08995 IPR013762 Integrase-like, catalytic core AL539_09005 IPR014942 Protein of unknown function DUF1814 AL539_09010 IPR003356 DNA methylase, adenine-specific AL539_09010 IPR004546 Restriction endonuclease, type I, HsdM AL539_09010 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain AL539_09010 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like AL539_09010 IPR038333 AL539_09010 AL539_09015 IPR000055 Restriction endonuclease, type I, HsdS AL539_09020 IPR006073 GTP binding domain AL539_09020 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_09025 IPR006073 GTP binding domain AL539_09025 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_09030 IPR029470 PD-(D/E)XK nuclease superfamily AL539_09035 IPR004473 Restriction endonuclease, type I, HsdR AL539_09035 IPR006935 Helicase/UvrB domain AL539_09035 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal AL539_09035 IPR014001 Helicase, superfamily 1/2, ATP-binding domain AL539_09035 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_09040 IPR002725 Protein of unknown function DUF45 AL539_09060 IPR000424 Primosome PriB/single-strand DNA-binding AL539_09060 IPR011344 Single-stranded DNA-binding protein AL539_09060 IPR012340 Nucleic acid-binding, OB-fold AL539_09065 IPR010183 Bacteriophage lambda, Bet AL539_09065 IPR018330 RecT family AL539_09070 IPR011335 Restriction endonuclease type II-like AL539_09070 IPR011604 Exonuclease, phage-type/RecB, C-terminal AL539_09070 IPR017482 Putative phage-type endonuclease AL539_09070 IPR019080 YqaJ viral recombinase AL539_09075 IPR003593 AAA+ ATPase domain AL539_09075 IPR011704 ATPase, dynein-related, AAA domain AL539_09075 IPR013615 CbbQ/NirQ/NorQ, C-terminal AL539_09075 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_09085 IPR021496 Protein of unknown function DUF3150 AL539_09095 IPR002035 von Willebrand factor, type A AL539_09095 IPR036465 AL539_09095 AL539_09100 IPR001405 RadC protein AL539_09100 IPR020891 Uncharacterised protein family UPF0758, conserved site AL539_09100 IPR025657 RadC-like JAB domain AL539_09110 IPR006171 Toprim domain AL539_09110 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal AL539_09120 IPR005835 Nucleotidyl transferase AL539_09120 IPR005836 ADP-glucose pyrophosphorylase, conserved site AL539_09120 IPR011004 Trimeric LpxA-like AL539_09120 IPR011831 Glucose-1-phosphate adenylyltransferase AL539_09120 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial AL539_09120 IPR029044 Nucleotide-diphospho-sugar transferases AL539_09130 IPR005134 Uncharacterised protein family UPF0114 AL539_09130 IPR020761 Uncharacterised protein family UPF0114, bacteria AL539_09135 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal AL539_09135 IPR003346 Transposase, IS116/IS110/IS902 AL539_09140 IPR006118 Recombinase, conserved site AL539_09140 IPR006119 Resolvase, N-terminal AL539_09140 IPR036162 AL539_09140 AL539_09145 IPR009241 Addiction module killer protein AL539_09150 IPR001387 Cro/C1-type helix-turn-helix domain AL539_09150 IPR010982 Lambda repressor-like, DNA-binding domain AL539_09150 IPR039554 AL539_09150 AL539_09165 IPR010813 Protein of unknown function DUF1413 AL539_09180 IPR021104 KfrA, N-terminal DNA-binding domain AL539_09195 IPR002104 Integrase, catalytic AL539_09195 IPR011010 DNA breaking-rejoining enzyme, catalytic core AL539_09195 IPR013762 Integrase-like, catalytic core AL539_09200 IPR000340 Dual specificity phosphatase, catalytic domain AL539_09200 IPR016130 Protein-tyrosine phosphatase, active site AL539_09200 IPR029021 Protein-tyrosine phosphatase-like AL539_09220 IPR001387 Cro/C1-type helix-turn-helix domain AL539_09220 IPR010982 Lambda repressor-like, DNA-binding domain AL539_09245 IPR006171 Toprim domain AL539_09245 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal AL539_09275 IPR003607 HD/PDEase domain AL539_09275 IPR006674 HD domain AL539_09335 IPR001455 TusA-like domain AL539_09335 IPR022931 Sulphurtransferase TusA AL539_09335 IPR036868 AL539_09335 AL539_09370 IPR001041 2Fe-2S ferredoxin-type domain AL539_09370 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site AL539_09370 IPR012675 Beta-grasp domain AL539_09370 IPR036010 AL539_09370 AL539_09375 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like AL539_09385 IPR021436 Protein of unknown function DUF3085 AL539_09405 IPR002035 von Willebrand factor, type A AL539_09405 IPR006538 Cobalt chelatase, CobT subunit AL539_09405 IPR036465 AL539_09405 AL539_09410 IPR021496 Protein of unknown function DUF3150 AL539_09415 IPR011335 Restriction endonuclease type II-like AL539_09415 IPR011604 Exonuclease, phage-type/RecB, C-terminal AL539_09415 IPR017482 Putative phage-type endonuclease AL539_09415 IPR019080 YqaJ viral recombinase AL539_09420 IPR010183 Bacteriophage lambda, Bet AL539_09420 IPR018330 RecT family AL539_09430 IPR011704 ATPase, dynein-related, AAA domain AL539_09430 IPR013615 CbbQ/NirQ/NorQ, C-terminal AL539_09430 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_09450 IPR014996 Integrating conjugative element protein, PFL4669 AL539_09460 IPR002559 Transposase, IS4-like AL539_09460 IPR032806 AL539_09460 AL539_09475 IPR014121 Type-F conjugative transfer system mating-pair stabilisation protein TraN AL539_09480 IPR029151 Periplasmic sensor domain-like AL539_09485 IPR010574 L-alanine exporter AlaE AL539_09495 IPR003317 Cytochrome d ubiquinol oxidase, subunit II AL539_09500 IPR002585 Cytochrome d ubiquinol oxidase, subunit I AL539_09510 IPR021621 Protein of unknown function DUF3233 AL539_09515 IPR003660 HAMP linker domain AL539_09515 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AL539_09515 IPR004090 Chemotaxis methyl-accepting receptor AL539_09520 IPR006143 RND efflux pump, membrane fusion protein AL539_09520 IPR032317 AL539_09520 AL539_09525 IPR001036 Acriflavin resistance protein AL539_09525 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 AL539_09525 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL539_09530 IPR000835 MarR-type HTH domain AL539_09530 IPR023187 Transcriptional regulator MarR-type, conserved site AL539_09530 IPR036388 AL539_09530 AL539_09530 IPR036390 AL539_09530 AL539_09535 IPR004776 Auxin efflux carrier AL539_09540 IPR002305 Aminoacyl-tRNA synthetase, class Ic AL539_09540 IPR002306 Tryptophan-tRNA ligase AL539_09540 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL539_09550 IPR005135 Endonuclease/exonuclease/phosphatase AL539_09550 IPR036691 AL539_09550 AL539_09560 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AL539_09560 IPR024478 4HB MCP domain AL539_09570 IPR009078 Ferritin-like superfamily AL539_09570 IPR010386 tRNA-hydroxylase MiaE AL539_09570 IPR012347 Ferritin-related AL539_09575 IPR001646 Pentapeptide repeat AL539_09595 IPR013610 Domain of unknown function DUF1738 AL539_09640 IPR003356 DNA methylase, adenine-specific AL539_09640 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like AL539_09660 IPR002197 DNA binding HTH domain, Fis-type AL539_09660 IPR009057 Homeodomain-like AL539_09670 IPR021316 Protein of unknown function DUF2913 AL539_09675 IPR006935 Helicase/UvrB domain AL539_09675 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_09680 IPR002052 DNA methylase, N-6 adenine-specific, conserved site AL539_09680 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class AL539_09680 IPR002941 DNA methylase N-4/N-6 AL539_09680 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like AL539_09690 IPR006119 Resolvase, N-terminal AL539_09690 IPR011109 Recombinase AL539_09690 IPR025827 Recombinase zinc beta ribbon domain AL539_09690 IPR036162 AL539_09690 AL539_09705 IPR000847 Transcription regulator HTH, LysR AL539_09705 IPR005119 LysR, substrate-binding AL539_09705 IPR036388 AL539_09705 AL539_09705 IPR036390 AL539_09705 AL539_09710 IPR025714 Methyltransferase domain AL539_09710 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like AL539_09715 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain AL539_09715 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal AL539_09715 IPR008141 Alanine dehydrogenase AL539_09715 IPR036291 AL539_09715 AL539_09720 IPR000485 AsnC-type HTH domain AL539_09720 IPR011008 Dimeric alpha-beta barrel AL539_09720 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AL539_09720 IPR019887 Transcription regulator AsnC-type, C-terminal AL539_09720 IPR019888 Transcription regulator AsnC-type AL539_09720 IPR036388 AL539_09720 AL539_09720 IPR036390 AL539_09720 AL539_09725 IPR002543 FtsK domain AL539_09725 IPR018541 FtsK gamma domain AL539_09725 IPR025199 Domain of unknown function DUF4117 AL539_09725 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_09725 IPR036388 AL539_09725 AL539_09725 IPR036390 AL539_09725 AL539_09730 IPR004564 Outer membrane lipoprotein carrier protein LolA-like AL539_09730 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria AL539_09730 IPR029046 Lipoprotein localisation LolA/LolB/LppX AL539_09735 IPR003593 AAA+ ATPase domain AL539_09735 IPR003959 ATPase, AAA-type, core AL539_09735 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal AL539_09735 IPR021886 MgsA AAA+ ATPase C-terminal AL539_09735 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_09735 IPR032423 AL539_09735 AL539_09740 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain AL539_09740 IPR002317 Serine-tRNA ligase, type1 AL539_09740 IPR010978 tRNA-binding arm AL539_09740 IPR015866 Serine-tRNA synthetase, type1, N-terminal AL539_09745 IPR024408 Domain of unknown function DUF3380 AL539_09755 IPR000962 Zinc finger, DksA/TraR C4-type AL539_09760 IPR005814 Aminotransferase class-III AL539_09760 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA AL539_09760 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 AL539_09760 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 AL539_09760 IPR015424 Pyridoxal phosphate-dependent transferase AL539_09765 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB AL539_09765 IPR006638 Elongator protein 3/MiaB/NifB AL539_09765 IPR007197 Radical SAM AL539_09765 IPR010722 Biotin and thiamin synthesis-associated domain AL539_09765 IPR013785 Aldolase-type TIM barrel AL539_09765 IPR024177 Biotin synthase AL539_09770 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site AL539_09770 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type AL539_09770 IPR004839 Aminotransferase, class I/classII AL539_09770 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 AL539_09770 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 AL539_09770 IPR015424 Pyridoxal phosphate-dependent transferase AL539_09770 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria AL539_09775 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC AL539_09775 IPR013216 Methyltransferase type 11 AL539_09775 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like AL539_09780 IPR004472 Dethiobiotin synthase BioD AL539_09780 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_09790 IPR001915 Peptidase M48 AL539_09790 IPR022919 Peptidase M48, protease HtpX, putative AL539_09795 IPR032710 AL539_09795 AL539_09795 IPR037401 AL539_09795 AL539_09800 IPR002347 Glucose/ribitol dehydrogenase AL539_09800 IPR020904 Short-chain dehydrogenase/reductase, conserved site AL539_09800 IPR036291 AL539_09800 AL539_09805 IPR002937 Amine oxidase AL539_09805 IPR036188 AL539_09805 AL539_09810 IPR010775 Protein of unknown function DUF1365 AL539_09815 IPR003333 Mycolic acid cyclopropane synthase AL539_09815 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like AL539_09820 IPR021306 Protein of unknown function DUF2878 AL539_09825 IPR016087 Chalcone isomerase AL539_09830 IPR024409 Protein of unknown function DUF3833 AL539_09835 IPR000362 Fumarate lyase family AL539_09835 IPR004769 Adenylosuccinate lyase AL539_09835 IPR008948 L-Aspartase-like AL539_09835 IPR013539 Adenylosuccinate lyase PurB, C-terminal AL539_09835 IPR020557 Fumarate lyase, conserved site AL539_09835 IPR022761 Fumarate lyase, N-terminal AL539_09835 IPR024083 Fumarase/histidase, N-terminal AL539_09840 IPR007451 Uncharacterised protein family UPF0274 AL539_09840 IPR035932 AL539_09840 AL539_09845 IPR004506 tRNA-specific 2-thiouridylase AL539_09845 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL539_09845 IPR023382 Adenine nucleotide alpha hydrolase-like domains AL539_09855 IPR011611 Carbohydrate kinase PfkB AL539_09855 IPR029056 Ribokinase-like AL539_09860 IPR001801 Histone-like protein H-NS AL539_09860 IPR027444 Histone-like protein H-NS, C-terminal domain AL539_09860 IPR027454 Histone-like protein H-NS family, oligomerisation domain AL539_09860 IPR037150 AL539_09860 AL539_09865 IPR018461 Na+/H+ antiporter, NhaC-like AL539_09870 IPR011322 Nitrogen regulatory PII-like, alpha/beta AL539_09870 IPR013115 Histidine biosynthesis HisG, C-terminal AL539_09870 IPR013820 ATP phosphoribosyltransferase, catalytic domain AL539_09870 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal AL539_09870 IPR018198 ATP phosphoribosyltransferase, conserved site AL539_09870 IPR020621 ATP phosphoribosyltransferase HisG, long form AL539_09875 IPR001692 Histidinol dehydrogenase, conserved site AL539_09875 IPR012131 Histidinol dehydrogenase AL539_09875 IPR016161 Aldehyde/histidinol dehydrogenase AL539_09875 IPR022695 Histidinol dehydrogenase, monofunctional AL539_09880 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site AL539_09880 IPR004839 Aminotransferase, class I/classII AL539_09880 IPR005861 Histidinol-phosphate aminotransferase family AL539_09880 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 AL539_09880 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 AL539_09880 IPR015424 Pyridoxal phosphate-dependent transferase AL539_09885 IPR000807 Imidazoleglycerol-phosphate dehydratase AL539_09885 IPR005954 Histidinol-phosphatase AL539_09885 IPR006543 Histidinol-phosphate phosphatase AL539_09885 IPR006549 HAD-superfamily hydrolase,subfamily IIIA AL539_09885 IPR013954 Polynucleotide kinase 3 phosphatase AL539_09885 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site AL539_09885 IPR020566 Histidine biosynthesis bifunctional protein HisB AL539_09885 IPR020568 Ribosomal protein S5 domain 2-type fold AL539_09885 IPR023214 HAD-like domain AL539_09885 IPR036412 AL539_09885 AL539_09885 IPR038494 AL539_09885 AL539_09890 IPR010139 Imidazole glycerol phosphate synthase, subunit H AL539_09890 IPR017926 Glutamine amidotransferase AL539_09890 IPR029062 Class I glutamine amidotransferase-like AL539_09895 IPR006062 Histidine biosynthesis AL539_09895 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA AL539_09895 IPR011060 Ribulose-phosphate binding barrel AL539_09895 IPR013785 Aldolase-type TIM barrel AL539_09895 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase AL539_09900 IPR004651 Histidine biosynthesis, HisF AL539_09900 IPR006062 Histidine biosynthesis AL539_09900 IPR011060 Ribulose-phosphate binding barrel AL539_09900 IPR013785 Aldolase-type TIM barrel AL539_09905 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain AL539_09905 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase AL539_09905 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like AL539_09905 IPR023019 Histidine biosynthesis bifunctional protein HisIE AL539_09905 IPR038019 AL539_09905 AL539_09910 IPR004027 SEC-C motif AL539_09910 IPR023006 Uncharacterised protein family UPF0225 AL539_09910 IPR032710 AL539_09910 AL539_09915 IPR001633 EAL domain AL539_09915 IPR013976 Metal-dependent hydrolase HDOD AL539_09915 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing AL539_09915 IPR035919 AL539_09915 AL539_09920 IPR010138 UDP-2,3-diacylglucosamine hydrolase AL539_09920 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type AL539_09920 IPR029052 Metallo-dependent phosphatase-like AL539_09925 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain AL539_09925 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site AL539_09925 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase AL539_09925 IPR029000 Cyclophilin-like domain AL539_09930 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding AL539_09930 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL539_09930 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR AL539_09930 IPR015803 Cysteine-tRNA ligase AL539_09930 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase AL539_09930 IPR032678 AL539_09930 AL539_09935 IPR001267 Thymidine kinase AL539_09935 IPR020633 Thymidine kinase, conserved site AL539_09935 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_09940 IPR003848 Domain of unknown function DUF218 AL539_09940 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL539_09945 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain AL539_09945 IPR036291 AL539_09945 AL539_09950 IPR000847 Transcription regulator HTH, LysR AL539_09950 IPR005119 LysR, substrate-binding AL539_09950 IPR036388 AL539_09950 AL539_09950 IPR036390 AL539_09950 AL539_09955 IPR007896 Transmembrane pair, bacterial AL539_09960 IPR013468 Conserved hypothetical protein CHP02647 AL539_09960 IPR020948 Phosphate-starvation-induced PsiE-like AL539_09965 IPR000292 Formate/nitrite transporter AL539_09965 IPR023271 Aquaporin-like AL539_09965 IPR023999 Formate transporter FocA, putative AL539_09965 IPR024002 Formate/nitrite transporter, conserved site AL539_09975 IPR005226 UPF0014 family AL539_09980 IPR010649 Nitrate/trimethylamine N-oxide reductase NapE/TorE AL539_09980 IPR014316 Trimethylamine N-oxide reductase system, TorE AL539_09985 IPR005126 NapC/NirT cytochrome c, N-terminal AL539_09985 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK AL539_09985 IPR036280 AL539_09985 AL539_09985 IPR038266 AL539_09985 AL539_09990 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site AL539_09990 IPR006656 Molybdopterin oxidoreductase AL539_09990 IPR006657 Molydopterin dinucleotide-binding domain AL539_09990 IPR009010 Aspartate decarboxylase-like domain AL539_09990 IPR011887 Trimethylamine-N-oxide reductase TorA AL539_09990 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AL539_09995 IPR002252 Glycoside hydrolase, family 36 AL539_09995 IPR013785 Aldolase-type TIM barrel AL539_09995 IPR017853 Glycoside hydrolase, superfamily AL539_10000 IPR021552 Protein of unknown function DUF2899 AL539_10005 IPR001667 DDH domain AL539_10005 IPR004097 DHHA2 domain AL539_10005 IPR038222 AL539_10005 AL539_10005 IPR038763 AL539_10005 AL539_10010 IPR021284 Protein of unknown function DUF2750 AL539_10015 IPR003439 ABC transporter-like AL539_10015 IPR003593 AAA+ ATPase domain AL539_10015 IPR017871 ABC transporter, conserved site AL539_10015 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_10020 IPR003439 ABC transporter-like AL539_10020 IPR003593 AAA+ ATPase domain AL539_10020 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal AL539_10020 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_10025 IPR000515 MetI-like domain AL539_10025 IPR025966 Oligopeptide transport permease C-like, N-terminal domain AL539_10025 IPR035906 AL539_10025 AL539_10030 IPR000515 MetI-like domain AL539_10030 IPR035906 AL539_10030 AL539_10035 IPR000914 Bacterial extracellular solute-binding protein, family 5 AL539_10035 IPR030678 AL539_10035 AL539_10040 IPR000641 CbxX/CfqX AL539_10040 IPR002078 RNA polymerase sigma factor 54 interaction domain AL539_10040 IPR002197 DNA binding HTH domain, Fis-type AL539_10040 IPR003593 AAA+ ATPase domain AL539_10040 IPR009057 Homeodomain-like AL539_10040 IPR014317 Transcription activator PspF AL539_10040 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AL539_10040 IPR025944 Sigma-54 interaction domain, conserved site AL539_10040 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_10045 IPR007157 PspA/IM30 AL539_10045 IPR014319 Phage shock protein, PspA AL539_10050 IPR009554 Phage shock protein, PspB AL539_10055 IPR007168 Phage shock protein, PspC, N-terminal AL539_10055 IPR014320 Phage shock protein, PspC AL539_10060 IPR006143 RND efflux pump, membrane fusion protein AL539_10060 IPR032317 AL539_10060 AL539_10065 IPR003997 RTX secretion protein D, Gram-negative bacteria AL539_10065 IPR006143 RND efflux pump, membrane fusion protein AL539_10065 IPR039562 AL539_10065 AL539_10070 IPR001036 Acriflavin resistance protein AL539_10070 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL539_10075 IPR005019 Methyladenine glycosylase AL539_10075 IPR011257 DNA glycosylase AL539_10080 IPR004961 Lipase chaperone AL539_10085 IPR000073 Alpha/beta hydrolase fold-1 AL539_10085 IPR029058 Alpha/Beta hydrolase fold AL539_10090 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme AL539_10090 IPR006233 Cystathionine beta-lyase, bacterial AL539_10090 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 AL539_10090 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 AL539_10090 IPR015424 Pyridoxal phosphate-dependent transferase AL539_10095 IPR001736 Phospholipase D/Transphosphatidylase AL539_10095 IPR022924 Cardiolipin synthase AL539_10095 IPR025202 Phospholipase D-like domain AL539_10095 IPR027379 Cardiolipin synthase N-terminal AL539_10095 IPR030840 AL539_10095 AL539_10100 IPR000175 Sodium:neurotransmitter symporter AL539_10100 IPR037272 AL539_10100 AL539_10105 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F AL539_10105 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site AL539_10105 IPR006508 Pseudouridine synthase, RluA-like AL539_10105 IPR020103 Pseudouridine synthase, catalytic domain AL539_10110 IPR019614 S-adenosylmethionine-dependent methyltransferase AL539_10110 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like AL539_10115 IPR001041 2Fe-2S ferredoxin-type domain AL539_10115 IPR001221 Phenol hydroxylase reductase AL539_10115 IPR001433 Oxidoreductase FAD/NAD(P)-binding AL539_10115 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site AL539_10115 IPR008333 Oxidoreductase, FAD-binding domain AL539_10115 IPR012675 Beta-grasp domain AL539_10115 IPR017938 Riboflavin synthase-like beta-barrel AL539_10115 IPR036010 AL539_10115 AL539_10115 IPR039261 AL539_10115 AL539_10120 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase AL539_10120 IPR010048 Hydroxylamine reductase AL539_10120 IPR011254 Prismane-like AL539_10120 IPR016099 Prismane-like, alpha/beta-sandwich AL539_10120 IPR016100 Prismane, alpha-bundle AL539_10125 IPR002078 RNA polymerase sigma factor 54 interaction domain AL539_10125 IPR002197 DNA binding HTH domain, Fis-type AL539_10125 IPR003018 GAF domain AL539_10125 IPR003593 AAA+ ATPase domain AL539_10125 IPR009057 Homeodomain-like AL539_10125 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AL539_10125 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AL539_10125 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_10125 IPR029016 GAF domain-like AL539_10135 IPR008816 Glycine zipper 2TM domain AL539_10140 IPR000462 CDP-alcohol phosphatidyltransferase AL539_10145 IPR003439 ABC transporter-like AL539_10145 IPR003593 AAA+ ATPase domain AL539_10145 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_10150 IPR035906 AL539_10150 AL539_10155 IPR006059 Bacterial extracellular solute-binding, family 1 AL539_10155 IPR027020 Protein ynjB AL539_10160 IPR005184 Domain of unknown function DUF306, Meta/HslJ AL539_10160 IPR038670 AL539_10160 AL539_10165 IPR010710 Protein of unknown function DUF1289 AL539_10180 IPR004843 Calcineurin-like phosphoesterase domain, apaH type AL539_10180 IPR006146 5'-Nucleotidase, conserved site AL539_10180 IPR006179 5'-Nucleotidase/apyrase AL539_10180 IPR008334 5'-Nucleotidase, C-terminal AL539_10180 IPR029052 Metallo-dependent phosphatase-like AL539_10180 IPR036907 AL539_10180 AL539_10185 IPR000182 GNAT domain AL539_10185 IPR016181 Acyl-CoA N-acyltransferase AL539_10190 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain AL539_10190 IPR020055 Ribosomal protein L25, short-form AL539_10190 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain AL539_10190 IPR029751 Ribosomal protein L25 AL539_10195 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_10195 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AL539_10195 IPR036097 AL539_10195 AL539_10195 IPR036890 AL539_10195 AL539_10200 IPR001789 Signal transduction response regulator, receiver domain AL539_10200 IPR001867 Signal transduction response regulator, C-terminal AL539_10200 IPR011006 CheY-like superfamily AL539_10200 IPR016032 Signal transduction response regulator, C-terminal effector AL539_10200 IPR036388 AL539_10200 AL539_10210 IPR001650 Helicase, C-terminal AL539_10210 IPR006935 Helicase/UvrB domain AL539_10210 IPR011332 Zinc-binding ribosomal protein AL539_10210 IPR014001 Helicase, superfamily 1/2, ATP-binding domain AL539_10210 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_10215 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F AL539_10215 IPR002942 RNA-binding S4 domain AL539_10215 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F AL539_10215 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site AL539_10215 IPR020103 Pseudouridine synthase, catalytic domain AL539_10215 IPR036986 AL539_10215 AL539_10225 IPR004812 Drug resistance transporter Bcr/CmlA subfamily AL539_10225 IPR011701 Major facilitator superfamily AL539_10225 IPR036259 AL539_10225 AL539_10230 IPR021316 Protein of unknown function DUF2913 AL539_10235 IPR016040 NAD(P)-binding domain AL539_10235 IPR021295 Protein of unknown function DUF2867 AL539_10235 IPR036291 AL539_10235 AL539_10240 IPR002528 Multi antimicrobial extrusion protein AL539_10245 IPR003439 ABC transporter-like AL539_10245 IPR003593 AAA+ ATPase domain AL539_10245 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_10250 IPR003838 Permease FtsX-like AL539_10255 IPR010791 Hydroxyneurosporene synthase AL539_10255 IPR023374 AttH-like domain AL539_10260 IPR004670 Na+/H+ antiporter NhaA AL539_10260 IPR023171 Na/H antiporter domain AL539_10265 IPR001647 DNA-binding HTH domain, TetR-type AL539_10265 IPR009057 Homeodomain-like AL539_10265 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AL539_10265 IPR036271 AL539_10265 AL539_10270 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AL539_10270 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AL539_10270 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain AL539_10270 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AL539_10270 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type AL539_10270 IPR036250 AL539_10270 AL539_10270 IPR037069 AL539_10270 AL539_10275 IPR010758 Trans-2-enoyl-CoA reductase AL539_10275 IPR024906 Enoyl reductase FAD binding domain AL539_10275 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative AL539_10280 IPR006037 Regulator of K+ conductance, C-terminal AL539_10280 IPR006512 YidE/YbjL duplication AL539_10280 IPR023017 Transport protein YbjL, putative AL539_10280 IPR036721 AL539_10280 AL539_10285 IPR002109 Glutaredoxin AL539_10285 IPR011902 Glutaredoxin, GrxA AL539_10285 IPR014025 Glutaredoxin subgroup AL539_10285 IPR036249 AL539_10285 AL539_10290 IPR001670 Alcohol dehydrogenase, iron-type AL539_10295 IPR000281 Helix-turn-helix protein RpiR AL539_10295 IPR001347 Sugar isomerase (SIS) AL539_10295 IPR009057 Homeodomain-like AL539_10295 IPR036388 AL539_10295 AL539_10300 IPR002129 Pyridoxal phosphate-dependent decarboxylase AL539_10300 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 AL539_10300 IPR015424 Pyridoxal phosphate-dependent transferase AL539_10300 IPR022517 Aspartate 1-decarboxylase, pyridoxal-dependent AL539_10310 IPR005642 Protein of unknown function DUF340, prokaryotic membrane AL539_10315 IPR013976 Metal-dependent hydrolase HDOD AL539_10330 IPR007076 TfoX, N-terminal AL539_10330 IPR007077 TfoX, C-terminal AL539_10330 IPR026256 Transcriptional regulator, TfoX/Sxy-type AL539_10340 IPR001789 Signal transduction response regulator, receiver domain AL539_10340 IPR011006 CheY-like superfamily AL539_10345 IPR000595 Cyclic nucleotide-binding domain AL539_10345 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_10345 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AL539_10345 IPR011006 CheY-like superfamily AL539_10345 IPR014710 RmlC-like jelly roll fold AL539_10345 IPR018490 Cyclic nucleotide-binding-like AL539_10345 IPR036097 AL539_10345 AL539_10345 IPR036890 AL539_10345 AL539_10350 IPR010352 Protein of unknown function DUF945 AL539_10355 IPR000192 Aminotransferase class V domain AL539_10355 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 AL539_10355 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 AL539_10355 IPR015424 Pyridoxal phosphate-dependent transferase AL539_10355 IPR020578 Aminotransferase class-V pyridoxal-phosphate binding site AL539_10355 IPR022278 Phosphoserine aminotransferase AL539_10360 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site AL539_10360 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AL539_10360 IPR011780 D-serine ammonia-lyase AL539_10360 IPR036052 AL539_10360 AL539_10365 IPR003439 ABC transporter-like AL539_10365 IPR003593 AAA+ ATPase domain AL539_10365 IPR011527 ABC transporter type 1, transmembrane domain AL539_10365 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC AL539_10365 IPR017871 ABC transporter, conserved site AL539_10365 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_10365 IPR036640 AL539_10365 AL539_10370 IPR003439 ABC transporter-like AL539_10370 IPR003593 AAA+ ATPase domain AL539_10370 IPR011527 ABC transporter type 1, transmembrane domain AL539_10370 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD AL539_10370 IPR017871 ABC transporter, conserved site AL539_10370 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_10370 IPR036640 AL539_10370 AL539_10375 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II AL539_10375 IPR005982 Thioredoxin reductase AL539_10375 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site AL539_10375 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain AL539_10375 IPR036188 AL539_10375 AL539_10380 IPR018724 2OG-Fe dioxygenase AL539_10385 IPR000192 Aminotransferase class V domain AL539_10385 IPR011340 Cysteine desulfurase-related AL539_10385 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 AL539_10385 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 AL539_10385 IPR015424 Pyridoxal phosphate-dependent transferase AL539_10390 IPR021246 Protein of unknown function DUF2797 AL539_10395 IPR000160 GGDEF domain AL539_10395 IPR008979 Galactose-binding domain-like AL539_10395 IPR013857 NADH:ubiquinone oxidoreductase intermediate-associated protein 30 AL539_10395 IPR029787 Nucleotide cyclase AL539_10400 IPR001898 Sodium/sulphate symporter AL539_10400 IPR031312 AL539_10400 AL539_10405 IPR003848 Domain of unknown function DUF218 AL539_10410 IPR001891 Malic oxidoreductase AL539_10410 IPR012301 Malic enzyme, N-terminal domain AL539_10410 IPR012302 Malic enzyme, NAD-binding AL539_10410 IPR015884 Malic enzyme, conserved site AL539_10410 IPR023667 NAD-dependent malic enzyme, proteobacteria AL539_10410 IPR036291 AL539_10410 AL539_10410 IPR037062 AL539_10410 AL539_10415 IPR001650 Helicase, C-terminal AL539_10415 IPR007502 Helicase-associated domain AL539_10415 IPR011545 DEAD/DEAH box helicase domain AL539_10415 IPR014001 Helicase, superfamily 1/2, ATP-binding domain AL539_10415 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_10425 IPR008963 Purple acid phosphatase-like, N-terminal AL539_10425 IPR018946 Alkaline phosphatase D-related AL539_10425 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AL539_10425 IPR032093 AL539_10425 AL539_10430 IPR014106 Phosphoribosylaminoimidazole-succinocarboxamide synthase, Vibrio-type AL539_10430 IPR018236 SAICAR synthetase, conserved site AL539_10430 IPR028923 SAICAR synthetase/ADE2, N-terminal AL539_10435 IPR004596 Cell division suppressor protein, SulA AL539_10435 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_10445 IPR011990 Tetratricopeptide-like helical domain AL539_10445 IPR036869 AL539_10445 AL539_10450 IPR006664 Outer membrane protein, bacterial AL539_10450 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal AL539_10450 IPR036737 AL539_10450 AL539_10450 IPR039567 AL539_10450 AL539_10455 IPR016868 Bacteriophage B3, Orf5 AL539_10455 IPR024498 Domain of unknown function DUF2786 AL539_10460 IPR024513 Protein of unknown function DUF3334 AL539_10460 IPR028976 CheC-like domain AL539_10465 IPR004113 FAD-linked oxidase, C-terminal AL539_10465 IPR006094 FAD linked oxidase, N-terminal AL539_10465 IPR009051 Alpha-helical ferredoxin AL539_10465 IPR016164 FAD-linked oxidase-like, C-terminal AL539_10465 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL539_10465 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL539_10465 IPR036318 AL539_10465 AL539_10470 IPR007318 Phospholipid methyltransferase AL539_10475 IPR021974 Protein of unknown function DUF3581 AL539_10480 IPR001106 Aromatic amino acid lyase AL539_10480 IPR005921 Histidine ammonia-lyase AL539_10480 IPR008948 L-Aspartase-like AL539_10480 IPR022313 Phenylalanine/histidine ammonia-lyases, active site AL539_10480 IPR024083 Fumarase/histidase, N-terminal AL539_10485 IPR023636 Urocanase conserved site AL539_10485 IPR023637 Urocanase AL539_10485 IPR035085 AL539_10485 AL539_10485 IPR035400 AL539_10485 AL539_10485 IPR035401 AL539_10485 AL539_10485 IPR036190 AL539_10485 AL539_10485 IPR038364 AL539_10485 AL539_10490 IPR005923 Formiminoglutamase AL539_10490 IPR006035 Ureohydrolase AL539_10490 IPR020855 Ureohydrolase, manganese-binding site AL539_10490 IPR023696 Ureohydrolase domain AL539_10495 IPR005920 Imidazolonepropionase AL539_10495 IPR006680 Amidohydrolase 1 AL539_10495 IPR011059 Metal-dependent hydrolase, composite domain AL539_10495 IPR032466 AL539_10495 AL539_10500 IPR000524 Transcription regulator HTH, GntR AL539_10500 IPR010248 Histidine utilization repressor AL539_10500 IPR011663 UbiC transcription regulator-associated AL539_10500 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AL539_10500 IPR036388 AL539_10500 AL539_10500 IPR036390 AL539_10500 AL539_10505 IPR009776 Sporulation stage 0, protein M AL539_10510 IPR021523 Protein of unknown function DUF3187 AL539_10515 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain AL539_10515 IPR002320 Threonine-tRNA ligase, class IIa AL539_10515 IPR004095 TGS AL539_10515 IPR004154 Anticodon-binding AL539_10515 IPR012675 Beta-grasp domain AL539_10515 IPR012676 TGS-like AL539_10515 IPR012947 Threonyl/alanyl tRNA synthetase, SAD AL539_10515 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain AL539_10515 IPR036621 AL539_10515 AL539_10520 IPR001288 Translation initiation factor 3 AL539_10520 IPR019813 Translation initiation factor 3, conserved site AL539_10520 IPR019814 Translation initiation factor 3, N-terminal AL539_10520 IPR019815 Translation initiation factor 3, C-terminal AL539_10520 IPR036787 AL539_10520 AL539_10520 IPR036788 AL539_10520 AL539_10525 IPR001706 Ribosomal protein L35, non-mitochondrial AL539_10525 IPR018265 Ribosomal protein L35, conserved site AL539_10525 IPR021137 Ribosomal protein L35 AL539_10525 IPR037229 AL539_10525 AL539_10530 IPR005813 Ribosomal protein L20 AL539_10530 IPR035566 AL539_10530 AL539_10535 IPR002765 Uncharacterised protein family UPF0145 AL539_10535 IPR035439 AL539_10535 AL539_10540 IPR001387 Cro/C1-type helix-turn-helix domain AL539_10540 IPR010982 Lambda repressor-like, DNA-binding domain AL539_10550 IPR001647 DNA-binding HTH domain, TetR-type AL539_10550 IPR009057 Homeodomain-like AL539_10555 IPR004869 Membrane transport protein, MMPL domain AL539_10560 IPR029046 Lipoprotein localisation LolA/LolB/LppX AL539_10560 IPR033399 AL539_10560 AL539_10570 IPR002319 Phenylalanyl-tRNA synthetase AL539_10570 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal AL539_10570 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit AL539_10570 IPR010978 tRNA-binding arm AL539_10570 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial AL539_10575 IPR002547 tRNA-binding domain AL539_10575 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit AL539_10575 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding AL539_10575 IPR005146 B3/B4 tRNA-binding domain AL539_10575 IPR005147 tRNA synthetase, B5-domain AL539_10575 IPR009061 DNA binding domain, putative AL539_10575 IPR012340 Nucleic acid-binding, OB-fold AL539_10575 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 AL539_10575 IPR036690 AL539_10575 AL539_10580 IPR004776 Auxin efflux carrier AL539_10585 IPR000119 Histone-like bacterial DNA-binding protein AL539_10585 IPR005684 Integration host factor, alpha subunit AL539_10585 IPR010992 Integration host factor (IHF)-like DNA-binding domain AL539_10585 IPR020816 Histone-like DNA-binding protein, conserved site AL539_10595 IPR008854 TPMT family AL539_10595 IPR022474 Thiopurine S-methyltransferase, Se/Te detoxification AL539_10595 IPR025835 Thiopurine S-methyltransferase AL539_10595 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like AL539_10600 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type AL539_10600 IPR005862 Phosphoribosylglycinamide formyltransferase 2 AL539_10600 IPR011054 Rudiment single hybrid motif AL539_10600 IPR013815 ATP-grasp fold, subdomain 1 AL539_10600 IPR016185 Pre-ATP-grasp domain AL539_10605 IPR002125 CMP/dCMP deaminase, zinc-binding AL539_10605 IPR006263 Cytidine deaminase, homodimeric AL539_10605 IPR013171 Cytidine/deoxycytidylate deaminase, zinc-binding domain AL539_10605 IPR016192 APOBEC/CMP deaminase, zinc-binding AL539_10605 IPR016193 Cytidine deaminase-like AL539_10605 IPR020797 Cytidine deaminase, bacteria AL539_10610 IPR007300 CidB/LrgB family AL539_10615 IPR005538 LrgA/CidA family AL539_10615 IPR022957 Uncharacterised protein family UPF0299 AL539_10620 IPR012337 Ribonuclease H-like domain AL539_10620 IPR013520 Exonuclease, RNase T/DNA polymerase III AL539_10620 IPR013620 Exonuclease C-terminal AL539_10620 IPR023607 Exodeoxyribonuclease I AL539_10620 IPR036397 AL539_10620 AL539_10620 IPR038649 AL539_10620 AL539_10625 IPR001991 Sodium:dicarboxylate symporter AL539_10625 IPR036458 AL539_10625 AL539_10630 IPR014843 HIM1 AL539_10630 IPR036291 AL539_10630 AL539_10635 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like AL539_10635 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic AL539_10635 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal AL539_10635 IPR036087 AL539_10635 AL539_10640 IPR003805 Cobalamin (vitamin B12) biosynthesis CobS, cobalamin-5-phosphate synthase AL539_10645 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase AL539_10645 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_10650 IPR013078 Histidine phosphatase superfamily, clade-1 AL539_10650 IPR017578 Alpha-ribazole phosphatase, CobC AL539_10650 IPR029033 Histidine phosphatase superfamily AL539_10655 IPR001567 Peptidase M3A/M3B AL539_10655 IPR011977 Peptidase M3B, oligoendopeptidase-related clade 3 AL539_10655 IPR013647 Oligopeptidase F, N-terminal domain AL539_10660 IPR007036 Succinylglutamate desuccinylase/aspartoacylase AL539_10660 IPR016681 Succinylglutamate desuccinylase AL539_10665 IPR000522 ABC transporter, permease protein AL539_10665 IPR023691 ABC transporter, vitamin B12 import, permease protein BtuC AL539_10665 IPR037294 AL539_10665 AL539_10670 IPR003439 ABC transporter-like AL539_10670 IPR003593 AAA+ ATPase domain AL539_10670 IPR023693 ABC transporter, vitamin B12, BtuD AL539_10670 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_10675 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like AL539_10680 IPR009858 Protein of unknown function DUF1415 AL539_10685 IPR005829 Sugar transporter, conserved site AL539_10685 IPR011701 Major facilitator superfamily AL539_10685 IPR036259 AL539_10685 AL539_10690 IPR000847 Transcription regulator HTH, LysR AL539_10690 IPR005119 LysR, substrate-binding AL539_10690 IPR036388 AL539_10690 AL539_10690 IPR036390 AL539_10690 AL539_10695 IPR002109 Glutaredoxin AL539_10695 IPR011767 Glutaredoxin active site AL539_10695 IPR036249 AL539_10695 AL539_10700 IPR002725 Protein of unknown function DUF45 AL539_10705 IPR010286 Ribosomal RNA large subunit methyltransferase F-like AL539_10705 IPR016909 Ribosomal RNA large subunit methyltransferase F AL539_10705 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like AL539_10715 IPR005151 Tail specific protease AL539_10715 IPR029045 ClpP/crotonase-like domain AL539_10715 IPR036034 AL539_10715 AL539_10725 IPR000524 Transcription regulator HTH, GntR AL539_10725 IPR008920 Transcription regulator FadR/GntR, C-terminal AL539_10725 IPR011711 GntR, C-terminal AL539_10725 IPR036388 AL539_10725 AL539_10725 IPR036390 AL539_10725 AL539_10730 IPR015590 Aldehyde dehydrogenase domain AL539_10730 IPR016161 Aldehyde/histidinol dehydrogenase AL539_10730 IPR016162 Aldehyde dehydrogenase, N-terminal AL539_10730 IPR016163 Aldehyde dehydrogenase, C-terminal AL539_10735 IPR008794 Proline racemase family AL539_10740 IPR006076 FAD dependent oxidoreductase AL539_10740 IPR036188 AL539_10740 AL539_10745 IPR006059 Bacterial extracellular solute-binding, family 1 AL539_10750 IPR003462 Ornithine cyclodeaminase/mu-crystallin AL539_10750 IPR023401 Ornithine cyclodeaminase, N-terminal AL539_10750 IPR036291 AL539_10750 AL539_10755 IPR002220 DapA-like AL539_10755 IPR013785 Aldolase-type TIM barrel AL539_10760 IPR003439 ABC transporter-like AL539_10760 IPR003593 AAA+ ATPase domain AL539_10760 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit AL539_10760 IPR008995 Molybdate/tungstate binding, C-terminal AL539_10760 IPR013611 Transport-associated OB, type 2 AL539_10760 IPR017871 ABC transporter, conserved site AL539_10760 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_10765 IPR000515 MetI-like domain AL539_10765 IPR035906 AL539_10765 AL539_10770 IPR000515 MetI-like domain AL539_10770 IPR035906 AL539_10770 AL539_10780 IPR000601 PKD domain AL539_10780 IPR002169 Peptidase M9A/M9B, collagenase, bacterial AL539_10780 IPR013661 Peptidase M9, collagenase, N-terminal domain AL539_10780 IPR013783 Immunoglobulin-like fold AL539_10780 IPR022409 PKD/Chitinase domain AL539_10780 IPR035986 AL539_10780 AL539_10785 IPR000587 Creatinase, N-terminal AL539_10785 IPR000994 Peptidase M24, structural domain AL539_10785 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal AL539_10785 IPR032416 AL539_10785 AL539_10785 IPR036005 AL539_10785 AL539_10790 IPR003439 ABC transporter-like AL539_10790 IPR003593 AAA+ ATPase domain AL539_10790 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal AL539_10790 IPR017871 ABC transporter, conserved site AL539_10790 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_10795 IPR003439 ABC transporter-like AL539_10795 IPR003593 AAA+ ATPase domain AL539_10795 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal AL539_10795 IPR017871 ABC transporter, conserved site AL539_10795 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_10800 IPR000515 MetI-like domain AL539_10800 IPR025966 Oligopeptide transport permease C-like, N-terminal domain AL539_10800 IPR035906 AL539_10800 AL539_10805 IPR000515 MetI-like domain AL539_10805 IPR035906 AL539_10805 AL539_10810 IPR000914 Bacterial extracellular solute-binding protein, family 5 AL539_10810 IPR030678 AL539_10810 AL539_10815 IPR002933 Peptidase M20 AL539_10815 IPR008007 Peptidase M42 AL539_10815 IPR010162 Peptidase M20B, peptidase T AL539_10815 IPR011650 Peptidase M20, dimerisation domain AL539_10815 IPR036264 AL539_10815 AL539_10820 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AL539_10820 IPR005956 4-hydroxyphenylpyruvate dioxygenase AL539_10820 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL539_10825 IPR005708 Homogentisate 1,2-dioxygenase AL539_10825 IPR011051 RmlC-like cupin domain AL539_10825 IPR014710 RmlC-like jelly roll fold AL539_10830 IPR011234 Fumarylacetoacetase, C-terminal-related AL539_10830 IPR036663 AL539_10830 AL539_10835 IPR004045 Glutathione S-transferase, N-terminal AL539_10835 IPR005955 Maleylacetoacetate isomerase AL539_10835 IPR036249 AL539_10835 AL539_10835 IPR036282 AL539_10835 AL539_10840 IPR014538 Uncharacterised conserved protein, topoisomerase zinc finger AL539_10840 IPR024402 Domain of unknown function DUF2726 AL539_10920 IPR032871 AL539_10920 AL539_10940 IPR021681 Protein of unknown function DUF3265 AL539_10980 IPR014922 Domain of unknown function DUF1801 AL539_10995 IPR025638 Protein of unknown function DUF4336 AL539_10995 IPR036866 AL539_10995 AL539_11000 IPR018461 Na+/H+ antiporter, NhaC-like AL539_11005 IPR008146 Glutamine synthetase, catalytic domain AL539_11005 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain AL539_11005 IPR027303 Glutamine synthetase, glycine-rich site AL539_11005 IPR036651 AL539_11005 AL539_11015 IPR011697 Peptidase C26 AL539_11015 IPR029062 Class I glutamine amidotransferase-like AL539_11020 IPR001387 Cro/C1-type helix-turn-helix domain AL539_11020 IPR010982 Lambda repressor-like, DNA-binding domain AL539_11020 IPR011051 RmlC-like cupin domain AL539_11020 IPR013096 Cupin 2, conserved barrel AL539_11020 IPR014710 RmlC-like jelly roll fold AL539_11025 IPR015590 Aldehyde dehydrogenase domain AL539_11025 IPR016160 Aldehyde dehydrogenase, cysteine active site AL539_11025 IPR016161 Aldehyde/histidinol dehydrogenase AL539_11025 IPR016162 Aldehyde dehydrogenase, N-terminal AL539_11025 IPR016163 Aldehyde dehydrogenase, C-terminal AL539_11025 IPR029510 Aldehyde dehydrogenase, glutamic acid active site AL539_11030 IPR006076 FAD dependent oxidoreductase AL539_11030 IPR036188 AL539_11030 AL539_11035 IPR003010 Carbon-nitrogen hydrolase AL539_11035 IPR017755 N-carbamoylputrescine amidase AL539_11035 IPR036526 AL539_11035 AL539_11040 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type AL539_11040 IPR017754 Agmatine deiminase AL539_11045 IPR010102 Succinate semialdehyde dehydrogenase AL539_11045 IPR015590 Aldehyde dehydrogenase domain AL539_11045 IPR016160 Aldehyde dehydrogenase, cysteine active site AL539_11045 IPR016161 Aldehyde/histidinol dehydrogenase AL539_11045 IPR016162 Aldehyde dehydrogenase, N-terminal AL539_11045 IPR016163 Aldehyde dehydrogenase, C-terminal AL539_11045 IPR029510 Aldehyde dehydrogenase, glutamic acid active site AL539_11050 IPR004632 4-aminobutyrate aminotransferase, bacterial AL539_11050 IPR005814 Aminotransferase class-III AL539_11050 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 AL539_11050 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 AL539_11050 IPR015424 Pyridoxal phosphate-dependent transferase AL539_11055 IPR001633 EAL domain AL539_11055 IPR035919 AL539_11055 AL539_11060 IPR000620 Drug/metabolite transporter AL539_11065 IPR000835 MarR-type HTH domain AL539_11065 IPR023187 Transcriptional regulator MarR-type, conserved site AL539_11065 IPR036388 AL539_11065 AL539_11065 IPR036390 AL539_11065 AL539_11070 IPR007351 Uncharacterised protein YjbR AL539_11070 IPR038056 AL539_11070 AL539_11075 IPR009305 Protein of unknown function DUF962 AL539_11085 IPR023614 Porin domain AL539_11095 IPR001789 Signal transduction response regulator, receiver domain AL539_11095 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_11095 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain AL539_11095 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AL539_11095 IPR011006 CheY-like superfamily AL539_11095 IPR036097 AL539_11095 AL539_11095 IPR036890 AL539_11095 AL539_11100 IPR000160 GGDEF domain AL539_11100 IPR001633 EAL domain AL539_11100 IPR029787 Nucleotide cyclase AL539_11100 IPR035919 AL539_11100 AL539_11110 IPR011990 Tetratricopeptide-like helical domain AL539_11110 IPR013360 Pilus biogenesis/stability type IV, PilW AL539_11110 IPR019734 Tetratricopeptide repeat AL539_11115 IPR005697 Homoserine O-succinyltransferase AL539_11115 IPR029062 Class I glutamine amidotransferase-like AL539_11115 IPR033752 AL539_11115 AL539_11125 IPR000390 Small multidrug resistance protein family AL539_11130 IPR004960 Bacterial lipid A biosynthesis acyltransferase AL539_11130 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase AL539_11135 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase AL539_11140 IPR001123 Lysine-type exporter protein (LYSE/YGGA) AL539_11150 IPR001463 Sodium:alanine symporter AL539_11170 IPR026275 Glyoxalase/bleomycin resistance protein/dioxygenase AL539_11170 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL539_11175 IPR000917 Sulfatase AL539_11175 IPR012160 Membrane sulfatase, HI1246-related AL539_11175 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha AL539_11175 IPR017850 Alkaline-phosphatase-like, core domain AL539_11180 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain AL539_11185 IPR000515 MetI-like domain AL539_11185 IPR035906 AL539_11185 AL539_11190 IPR000644 CBS domain AL539_11190 IPR003439 ABC transporter-like AL539_11190 IPR003593 AAA+ ATPase domain AL539_11190 IPR005892 Glycine betaine transport ATP-binding subunit AL539_11190 IPR017871 ABC transporter, conserved site AL539_11190 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_11195 IPR000595 Cyclic nucleotide-binding domain AL539_11195 IPR000644 CBS domain AL539_11195 IPR005105 Protein-PII uridylyltransferase, N-terminal AL539_11195 IPR014710 RmlC-like jelly roll fold AL539_11195 IPR018490 Cyclic nucleotide-binding-like AL539_11195 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding AL539_11200 IPR006054 DNA polymerase III, epsilon subunit AL539_11200 IPR012337 Ribonuclease H-like domain AL539_11200 IPR013520 Exonuclease, RNase T/DNA polymerase III AL539_11200 IPR036397 AL539_11200 AL539_11205 IPR000060 BCCT transporter family AL539_11210 IPR000182 GNAT domain AL539_11210 IPR012772 L-2,4-diaminobutyric acid acetyltransferase AL539_11210 IPR016181 Acyl-CoA N-acyltransferase AL539_11215 IPR004637 2,4-diaminobutyrate 4-transaminase AL539_11215 IPR005814 Aminotransferase class-III AL539_11215 IPR012773 Ectoine biosynthetic protein AL539_11215 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 AL539_11215 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 AL539_11215 IPR015424 Pyridoxal phosphate-dependent transferase AL539_11220 IPR010462 Ectoine synthase AL539_11220 IPR011051 RmlC-like cupin domain AL539_11220 IPR014710 RmlC-like jelly roll fold AL539_11225 IPR001048 Aspartate/glutamate/uridylate kinase AL539_11225 IPR036393 AL539_11225 AL539_11230 IPR000917 Sulfatase AL539_11230 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha AL539_11230 IPR017850 Alkaline-phosphatase-like, core domain AL539_11235 IPR011990 Tetratricopeptide-like helical domain AL539_11235 IPR019734 Tetratricopeptide repeat AL539_11235 IPR023155 Cytochrome c-552/4 AL539_11235 IPR036280 AL539_11235 AL539_11240 IPR005532 Formylglycine-generating sulphatase enzyme domain AL539_11240 IPR016187 C-type lectin fold AL539_11245 IPR007197 Radical SAM AL539_11245 IPR013785 Aldolase-type TIM barrel AL539_11245 IPR023885 4Fe4S-binding SPASM domain AL539_11250 IPR011990 Tetratricopeptide-like helical domain AL539_11250 IPR016024 Armadillo-type fold AL539_11255 IPR023214 HAD-like domain AL539_11255 IPR036412 AL539_11255 AL539_11260 IPR000917 Sulfatase AL539_11260 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha AL539_11260 IPR017850 Alkaline-phosphatase-like, core domain AL539_11265 IPR000917 Sulfatase AL539_11265 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha AL539_11265 IPR017850 Alkaline-phosphatase-like, core domain AL539_11270 IPR011049 Serralysin-like metalloprotease, C-terminal AL539_11270 IPR013783 Immunoglobulin-like fold AL539_11280 IPR003997 RTX secretion protein D, Gram-negative bacteria AL539_11280 IPR006144 Secretion protein HlyD, conserved site AL539_11280 IPR010129 Type I secretion membrane fusion protein, HlyD AL539_11285 IPR003423 Outer membrane efflux protein AL539_11285 IPR010130 Type I secretion outer membrane protein, TolC AL539_11290 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal AL539_11290 IPR036737 AL539_11290 AL539_11300 IPR001034 HTH DeoR N-terminal domain AL539_11300 IPR014036 DeoR C-terminal sensor domain AL539_11300 IPR036390 AL539_11300 AL539_11300 IPR037171 AL539_11300 AL539_11305 IPR000683 Oxidoreductase, N-terminal AL539_11305 IPR004104 Oxidoreductase, C-terminal AL539_11305 IPR036291 AL539_11305 AL539_11310 IPR005624 Domain of unknown function DUF336 AL539_11310 IPR010371 Uncharacterised protein family UPF0303 AL539_11310 IPR038084 AL539_11310 AL539_11315 IPR000160 GGDEF domain AL539_11315 IPR029151 Periplasmic sensor domain-like AL539_11315 IPR029787 Nucleotide cyclase AL539_11315 IPR033479 AL539_11315 AL539_11320 IPR022224 Protein of unknown function DUF3750 AL539_11330 IPR000182 GNAT domain AL539_11330 IPR016181 Acyl-CoA N-acyltransferase AL539_11335 IPR001898 Sodium/sulphate symporter AL539_11335 IPR030676 AL539_11335 AL539_11340 IPR000595 Cyclic nucleotide-binding domain AL539_11340 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_11340 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AL539_11340 IPR014710 RmlC-like jelly roll fold AL539_11340 IPR018490 Cyclic nucleotide-binding-like AL539_11340 IPR036890 AL539_11340 AL539_11345 IPR001789 Signal transduction response regulator, receiver domain AL539_11345 IPR011006 CheY-like superfamily AL539_11350 IPR000014 PAS domain AL539_11350 IPR000160 GGDEF domain AL539_11350 IPR001610 PAC motif AL539_11350 IPR001633 EAL domain AL539_11350 IPR013655 PAS fold-3 AL539_11350 IPR029787 Nucleotide cyclase AL539_11350 IPR035919 AL539_11350 AL539_11350 IPR035965 AL539_11350 AL539_11355 IPR003607 HD/PDEase domain AL539_11355 IPR006674 HD domain AL539_11355 IPR021812 Protein of unknown function DUF3391 AL539_11360 IPR001123 Lysine-type exporter protein (LYSE/YGGA) AL539_11365 IPR016905 Glycyl radical enzyme, HI0521, predicted AL539_11370 IPR001989 Radical-activating enzyme, conserved site AL539_11370 IPR007197 Radical SAM AL539_11370 IPR012839 Glycyl radical enzyme activase AL539_11370 IPR013785 Aldolase-type TIM barrel AL539_11370 IPR023912 Glycyl radical enzyme activase, YjjW, bact AL539_11375 IPR000847 Transcription regulator HTH, LysR AL539_11375 IPR005119 LysR, substrate-binding AL539_11375 IPR036388 AL539_11375 AL539_11375 IPR036390 AL539_11375 AL539_11380 IPR005496 Integral membrane protein TerC AL539_11385 IPR005123 Oxoglutarate/iron-dependent dioxygenase AL539_11385 IPR006620 Prolyl 4-hydroxylase, alpha subunit AL539_11390 IPR003607 HD/PDEase domain AL539_11390 IPR006674 HD domain AL539_11390 IPR006675 Uncharacterised domain HDIG AL539_11395 IPR001670 Alcohol dehydrogenase, iron-type AL539_11400 IPR002293 Amino acid/polyamine transporter I AL539_11400 IPR013059 Tryptophan/tyrosine transporter AL539_11400 IPR013061 Tryptophan/tryrosine permease, conserved site AL539_11400 IPR018227 Tryptophan/tyrosine permease AL539_11405 IPR029016 GAF domain-like AL539_11415 IPR003439 ABC transporter-like AL539_11415 IPR003593 AAA+ ATPase domain AL539_11415 IPR017871 ABC transporter, conserved site AL539_11415 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_11420 IPR002491 ABC transporter periplasmic binding domain AL539_11425 IPR000522 ABC transporter, permease protein AL539_11425 IPR037294 AL539_11425 AL539_11430 IPR000531 TonB-dependent receptor, beta-barrel AL539_11430 IPR010105 TonB-dependent siderophore receptor AL539_11430 IPR012910 TonB-dependent receptor, plug AL539_11430 IPR036942 AL539_11430 AL539_11430 IPR037066 AL539_11430 AL539_11440 IPR003439 ABC transporter-like AL539_11440 IPR003593 AAA+ ATPase domain AL539_11440 IPR011527 ABC transporter type 1, transmembrane domain AL539_11440 IPR017871 ABC transporter, conserved site AL539_11440 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_11440 IPR036640 AL539_11440 AL539_11445 IPR003439 ABC transporter-like AL539_11445 IPR003593 AAA+ ATPase domain AL539_11445 IPR011527 ABC transporter type 1, transmembrane domain AL539_11445 IPR017871 ABC transporter, conserved site AL539_11445 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_11445 IPR036640 AL539_11445 AL539_11450 IPR012902 Prokaryotic N-terminal methylation site AL539_11455 IPR004445 Sodium/glutamate symporter AL539_11460 IPR000847 Transcription regulator HTH, LysR AL539_11460 IPR005119 LysR, substrate-binding AL539_11460 IPR036388 AL539_11460 AL539_11460 IPR036390 AL539_11460 AL539_11465 IPR007138 Antibiotic biosynthesis monooxygenase-like domain AL539_11465 IPR011008 Dimeric alpha-beta barrel AL539_11470 IPR000683 Oxidoreductase, N-terminal AL539_11470 IPR036291 AL539_11470 AL539_11475 IPR005019 Methyladenine glycosylase AL539_11475 IPR011257 DNA glycosylase AL539_11485 IPR013126 Heat shock protein 70 family AL539_11485 IPR021030 Protein of unknown function DUF3731 AL539_11490 IPR013126 Heat shock protein 70 family AL539_11490 IPR018181 Heat shock protein 70, conserved site AL539_11495 IPR021212 Domain of unknown function DUF2760 AL539_11500 IPR000160 GGDEF domain AL539_11500 IPR006189 CHASE AL539_11500 IPR029787 Nucleotide cyclase AL539_11505 IPR012337 Ribonuclease H-like domain AL539_11505 IPR013520 Exonuclease, RNase T/DNA polymerase III AL539_11505 IPR036397 AL539_11505 AL539_11510 IPR007791 Heat shock protein DnaJ-like protein DjlA AL539_11510 IPR029024 TerB-like AL539_11515 IPR018946 Alkaline phosphatase D-related AL539_11515 IPR038607 AL539_11515 AL539_11525 IPR010583 MltA-interacting MipA AL539_11535 IPR003680 Flavodoxin-like fold AL539_11535 IPR023048 NADH-azoreductase, FMN-dependent AL539_11535 IPR029039 Flavoprotein-like AL539_11540 IPR001650 Helicase, C-terminal AL539_11540 IPR003593 AAA+ ATPase domain AL539_11540 IPR007502 Helicase-associated domain AL539_11540 IPR010222 RNA helicase, ATP-dependent DEAH box, HrpA-type AL539_11540 IPR011545 DEAD/DEAH box helicase domain AL539_11540 IPR011709 Domain of unknown function DUF1605 AL539_11540 IPR014001 Helicase, superfamily 1/2, ATP-binding domain AL539_11540 IPR024590 RNA helicase, ATP-dependent DEAH box, HrpA, C-terminal AL539_11540 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_11545 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel AL539_11545 IPR027385 Outer membrane protein beta-barrel AL539_11550 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel AL539_11550 IPR027385 Outer membrane protein beta-barrel AL539_11555 IPR000060 BCCT transporter family AL539_11555 IPR018093 BCCT transporter, conserved site AL539_11560 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_11565 IPR003362 Bacterial sugar transferase AL539_11570 IPR029044 Nucleotide-diphospho-sugar transferases AL539_11575 IPR001296 Glycosyl transferase, family 1 AL539_11575 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain AL539_11590 IPR007016 O-antigen ligase-related AL539_11595 IPR002797 Polysaccharide biosynthesis protein AL539_11600 IPR001296 Glycosyl transferase, family 1 AL539_11605 IPR001296 Glycosyl transferase, family 1 AL539_11605 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain AL539_11610 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain AL539_11615 IPR001789 Signal transduction response regulator, receiver domain AL539_11615 IPR002078 RNA polymerase sigma factor 54 interaction domain AL539_11615 IPR002197 DNA binding HTH domain, Fis-type AL539_11615 IPR003593 AAA+ ATPase domain AL539_11615 IPR009057 Homeodomain-like AL539_11615 IPR011006 CheY-like superfamily AL539_11615 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AL539_11615 IPR025944 Sigma-54 interaction domain, conserved site AL539_11615 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_11620 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain AL539_11620 IPR036641 AL539_11620 AL539_11625 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_11630 IPR003715 Polysaccharide export protein AL539_11630 IPR019554 Soluble ligand binding domain AL539_11635 IPR006664 Outer membrane protein, bacterial AL539_11635 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal AL539_11635 IPR036737 AL539_11635 AL539_11640 IPR002645 STAS domain AL539_11640 IPR036513 AL539_11640 AL539_11645 IPR012310 DNA ligase, ATP-dependent, central AL539_11645 IPR012340 Nucleic acid-binding, OB-fold AL539_11645 IPR016059 DNA ligase, ATP-dependent, conserved site AL539_11645 IPR029319 DNA ligase, OB-like domain AL539_11650 IPR021431 Protein of unknown function DUF3080 AL539_11655 IPR002528 Multi antimicrobial extrusion protein AL539_11660 IPR001783 Lumazine-binding protein AL539_11660 IPR017938 Riboflavin synthase-like beta-barrel AL539_11660 IPR023366 ATP synthase subunit alpha-like domain AL539_11660 IPR026017 Lumazine-binding domain AL539_11665 IPR017143 Uncharacterised conserved protein UCP037225 AL539_11665 IPR025990 Cysteine-rich CPXCG protein AL539_11670 IPR011009 Protein kinase-like domain AL539_11670 IPR016477 Fructosamine/Ketosamine-3-kinase AL539_11675 IPR001789 Signal transduction response regulator, receiver domain AL539_11675 IPR011006 CheY-like superfamily AL539_11675 IPR028976 CheC-like domain AL539_11680 IPR000160 GGDEF domain AL539_11680 IPR029787 Nucleotide cyclase AL539_11680 IPR035965 AL539_11680 AL539_11685 IPR020979 Uncharacterised protein family A0KLC6 AL539_11690 IPR000064 Endopeptidase, NLPC/P60 domain AL539_11690 IPR038765 AL539_11690 AL539_11695 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AL539_11695 IPR004090 Chemotaxis methyl-accepting receptor AL539_11700 IPR000086 NUDIX hydrolase domain AL539_11700 IPR015797 NUDIX hydrolase domain-like AL539_11700 IPR020476 NUDIX hydrolase AL539_11705 IPR000086 NUDIX hydrolase domain AL539_11705 IPR015797 NUDIX hydrolase domain-like AL539_11720 IPR006694 Fatty acid hydroxylase AL539_11725 IPR005636 DTW AL539_11730 IPR000600 ROK AL539_11730 IPR023505 N-acetyl-D-glucosamine kinase AL539_11735 IPR021343 Protein of unknown function DUF2960 AL539_11740 IPR001453 Molybdopterin binding domain AL539_11740 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain AL539_11740 IPR005110 MoeA, N-terminal and linker domain AL539_11740 IPR005111 MoeA, C-terminal, domain IV AL539_11740 IPR008284 Molybdenum cofactor biosynthesis, conserved site AL539_11740 IPR012182 Bifunctional molybdenum cofactor biosynthesis MobB/MoeA AL539_11740 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_11740 IPR036135 AL539_11740 AL539_11740 IPR036425 AL539_11740 AL539_11740 IPR036688 AL539_11740 AL539_11745 IPR013482 Molybdenum cofactor guanylyltransferase AL539_11745 IPR025877 MobA-like NTP transferase domain AL539_11745 IPR029044 Nucleotide-diphospho-sugar transferases AL539_11750 IPR003439 ABC transporter-like AL539_11750 IPR003593 AAA+ ATPase domain AL539_11750 IPR017871 ABC transporter, conserved site AL539_11750 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_11755 IPR000515 MetI-like domain AL539_11755 IPR035906 AL539_11755 AL539_11760 IPR024370 PBP domain AL539_11765 IPR001789 Signal transduction response regulator, receiver domain AL539_11765 IPR002078 RNA polymerase sigma factor 54 interaction domain AL539_11765 IPR002197 DNA binding HTH domain, Fis-type AL539_11765 IPR003593 AAA+ ATPase domain AL539_11765 IPR009057 Homeodomain-like AL539_11765 IPR011006 CheY-like superfamily AL539_11765 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AL539_11765 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AL539_11765 IPR025944 Sigma-54 interaction domain, conserved site AL539_11765 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_11770 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_11770 IPR003660 HAMP linker domain AL539_11770 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain AL539_11770 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AL539_11770 IPR029151 Periplasmic sensor domain-like AL539_11770 IPR033463 AL539_11770 AL539_11770 IPR036097 AL539_11770 AL539_11770 IPR036890 AL539_11770 AL539_11780 IPR003439 ABC transporter-like AL539_11780 IPR003593 AAA+ ATPase domain AL539_11780 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_11780 IPR032781 AL539_11780 AL539_11785 IPR003786 Protein FdhD AL539_11785 IPR016193 Cytidine deaminase-like AL539_11790 IPR021736 Protein of unknown function DUF3305 AL539_11795 IPR021735 Protein of unknown function DUF3306 AL539_11800 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL539_11800 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL539_11805 IPR020945 DMSO/Nitrate reductase chaperone AL539_11805 IPR036411 AL539_11805 AL539_11810 IPR014177 Formate dehydrogenase, TAT signal-containing AL539_11810 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AL539_11815 IPR006656 Molybdopterin oxidoreductase AL539_11815 IPR006657 Molydopterin dinucleotide-binding domain AL539_11815 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain AL539_11815 IPR009010 Aspartate decarboxylase-like domain AL539_11815 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AL539_11815 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site AL539_11820 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL539_11820 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL539_11825 IPR006471 Formate dehydrogenase, gamma subunit AL539_11825 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase AL539_11825 IPR016174 Di-haem cytochrome, transmembrane AL539_11835 IPR001826 RHS protein AL539_11835 IPR006530 YD repeat AL539_11835 IPR022385 Rhs repeat-associated core AL539_11835 IPR031325 AL539_11835 AL539_11840 IPR029074 Immunity protein 29 AL539_11855 IPR029074 Immunity protein 29 AL539_11865 IPR029074 Immunity protein 29 AL539_11870 IPR029074 Immunity protein 29 AL539_11880 IPR029074 Immunity protein 29 AL539_11885 IPR029074 Immunity protein 29 AL539_11895 IPR029074 Immunity protein 29 AL539_11900 IPR029074 Immunity protein 29 AL539_11910 IPR029074 Immunity protein 29 AL539_11915 IPR018958 SMI1/KNR4 like domain AL539_11915 IPR037883 AL539_11915 AL539_11920 IPR029074 Immunity protein 29 AL539_11950 IPR002110 Ankyrin repeat AL539_11950 IPR020683 Ankyrin repeat-containing domain AL539_11950 IPR036770 AL539_11950 AL539_11955 IPR018047 Ammonium transporter, conserved site AL539_11955 IPR024041 Ammonium transporter AmtB-like domain AL539_11955 IPR029020 Ammonium/urea transporter AL539_11960 IPR003000 Sirtuin family AL539_11960 IPR026591 Sirtuin family, catalytic core small domain AL539_11960 IPR027546 Sirtuin, class III AL539_11960 IPR029035 DHS-like NAD/FAD-binding domain AL539_11965 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein AL539_11965 IPR006059 Bacterial extracellular solute-binding, family 1 AL539_11970 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein AL539_11970 IPR006059 Bacterial extracellular solute-binding, family 1 AL539_11975 IPR000515 MetI-like domain AL539_11975 IPR035906 AL539_11975 AL539_11980 IPR000515 MetI-like domain AL539_11980 IPR035906 AL539_11980 AL539_11985 IPR003439 ABC transporter-like AL539_11985 IPR003593 AAA+ ATPase domain AL539_11985 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit AL539_11985 IPR008995 Molybdate/tungstate binding, C-terminal AL539_11985 IPR013611 Transport-associated OB, type 2 AL539_11985 IPR017871 ABC transporter, conserved site AL539_11985 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_11995 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain AL539_12000 IPR021370 Protein of unknown function DUF2987 AL539_12005 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase AL539_12005 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA AL539_12005 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL539_12005 IPR035107 AL539_12005 AL539_12010 IPR006016 UspA AL539_12015 IPR000595 Cyclic nucleotide-binding domain AL539_12015 IPR012318 Helix-turn-helix motif, Crp-type AL539_12015 IPR014710 RmlC-like jelly roll fold AL539_12015 IPR018335 Transcription regulator HTH, Crp-type, conserved site AL539_12015 IPR018490 Cyclic nucleotide-binding-like AL539_12015 IPR036388 AL539_12015 AL539_12015 IPR036390 AL539_12015 AL539_12020 IPR039447 AL539_12020 AL539_12025 IPR004714 Cytochrome oxidase maturation protein cbb3-type AL539_12030 IPR001757 Cation-transporting P-type ATPase AL539_12030 IPR006121 Heavy metal-associated domain, HMA AL539_12030 IPR008250 P-type ATPase, A domain AL539_12030 IPR018303 P-type ATPase, phosphorylation site AL539_12030 IPR021993 Putative metal-binding domain of cation transport ATPase AL539_12030 IPR023214 HAD-like domain AL539_12030 IPR023298 P-type ATPase, transmembrane domain AL539_12030 IPR023299 P-type ATPase, cytoplasmic domain N AL539_12030 IPR027256 Cation-transporting P-type ATPase, subfamily IB AL539_12030 IPR036163 AL539_12030 AL539_12030 IPR036412 AL539_12030 AL539_12035 IPR008620 FixH AL539_12040 IPR004678 Cytochrome c oxidase cbb3-type, subunit III AL539_12040 IPR008168 Cytochrome c, class IC AL539_12040 IPR009056 Cytochrome c-like domain AL539_12040 IPR032858 AL539_12040 AL539_12040 IPR036909 AL539_12040 AL539_12040 IPR038414 AL539_12040 AL539_12045 IPR008621 Cbb3-type cytochrome oxidase component AL539_12050 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO AL539_12050 IPR036909 AL539_12050 AL539_12055 IPR000883 Cytochrome c oxidase subunit I AL539_12055 IPR004677 Cytochrome c oxidase cbb3-type, subunit I AL539_12055 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site AL539_12055 IPR036927 AL539_12055 AL539_12065 IPR013702 FIST domain, N-terminal AL539_12065 IPR019494 FIST C domain AL539_12070 IPR001789 Signal transduction response regulator, receiver domain AL539_12070 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_12070 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain AL539_12070 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AL539_12070 IPR011006 CheY-like superfamily AL539_12070 IPR036097 AL539_12070 AL539_12070 IPR036890 AL539_12070 AL539_12075 IPR032871 AL539_12075 AL539_12095 IPR022090 Protein of unknown function DUF3634 AL539_12100 IPR009390 Macrodomain Ter protein, MatP AL539_12100 IPR013321 Arc-type ribbon-helix-helix AL539_12100 IPR035087 AL539_12100 AL539_12100 IPR035375 AL539_12100 AL539_12100 IPR038339 AL539_12100 AL539_12105 IPR008269 Peptidase S16, Lon C-terminal AL539_12105 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AL539_12105 IPR020568 Ribosomal protein S5 domain 2-type fold AL539_12110 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA AL539_12110 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ AL539_12110 IPR029069 HotDog domain AL539_12115 IPR007040 Ribosome modulation factor AL539_12115 IPR023200 Ribosome modulation factor-like domain AL539_12120 IPR020008 GlyGly-CTERM domain AL539_12120 IPR022562 Protein of unknown function DUF3466 AL539_12125 IPR003439 ABC transporter-like AL539_12125 IPR003593 AAA+ ATPase domain AL539_12125 IPR017871 ABC transporter, conserved site AL539_12125 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_12125 IPR032524 AL539_12125 AL539_12125 IPR032781 AL539_12125 AL539_12125 IPR037118 AL539_12125 AL539_12130 IPR008554 Glutaredoxin-like AL539_12130 IPR036249 AL539_12130 AL539_12135 IPR000241 Putative RNA methylase domain AL539_12135 IPR002052 DNA methylase, N-6 adenine-specific, conserved site AL539_12135 IPR004114 THUMP AL539_12135 IPR017244 Ribosomal RNA large subunit methyltransferase K/L AL539_12135 IPR019614 S-adenosylmethionine-dependent methyltransferase AL539_12135 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like AL539_12140 IPR009809 Cell division protein ZapC AL539_12145 IPR001295 Dihydroorotate dehydrogenase, conserved site AL539_12145 IPR005719 Dihydroorotate dehydrogenase, class 2 AL539_12145 IPR005720 Dihydroorotate dehydrogenase domain AL539_12145 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 AL539_12145 IPR013785 Aldolase-type TIM barrel AL539_12150 IPR007780 Bacterial NAD-glutamate dehydrogenase AL539_12150 IPR028971 NAD-glutamate dehydrogenase AL539_12150 IPR036291 AL539_12150 AL539_12155 IPR021363 Protein of unknown function DUF2835 AL539_12160 IPR012779 Peptidase M1, alanyl aminopeptidase AL539_12160 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal AL539_12160 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal AL539_12160 IPR027268 AL539_12160 AL539_12160 IPR035414 AL539_12160 AL539_12160 IPR037144 AL539_12160 AL539_12160 IPR038438 AL539_12160 AL539_12170 IPR001478 PDZ domain AL539_12170 IPR004447 C-terminal-processing peptidase S41A AL539_12170 IPR005151 Tail specific protease AL539_12170 IPR012530 B melanoma antigen AL539_12170 IPR020992 Tail specific protease, C-terminal AL539_12170 IPR029045 ClpP/crotonase-like domain AL539_12170 IPR036034 AL539_12170 AL539_12175 IPR016103 ProQ/FinO domain AL539_12175 IPR023529 Transporter ProP effector, ProQ AL539_12175 IPR035236 AL539_12175 AL539_12175 IPR036442 AL539_12175 AL539_12180 IPR000614 Free Met sulfoxide reductase conserved site AL539_12180 IPR003018 GAF domain AL539_12180 IPR029016 GAF domain-like AL539_12185 IPR003439 ABC transporter-like AL539_12185 IPR003593 AAA+ ATPase domain AL539_12185 IPR011527 ABC transporter type 1, transmembrane domain AL539_12185 IPR017871 ABC transporter, conserved site AL539_12185 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_12185 IPR036640 AL539_12185 AL539_12190 IPR005219 Conserved hypothetical protein CHP00155 AL539_12190 IPR007498 Paraquat-inducible protein A AL539_12195 IPR003399 Mammalian cell entry-related AL539_12200 IPR001678 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p AL539_12200 IPR011023 Nop2p AL539_12200 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site AL539_12200 IPR023267 RNA (C5-cytosine) methyltransferase AL539_12200 IPR023545 rRNA small subunit methyltransferase F AL539_12200 IPR027391 rRNA small subunit methyltransferase F, C-terminal domain AL539_12200 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like AL539_12200 IPR031341 AL539_12200 AL539_12205 IPR014464 Conserved virulence factor B AL539_12205 IPR036388 AL539_12205 AL539_12205 IPR039566 AL539_12205 AL539_12215 IPR027961 Protein of unknown function DUF4442 AL539_12215 IPR029069 HotDog domain AL539_12220 IPR006218 DAHP synthetase I/KDSA AL539_12220 IPR006219 DHAP synthase, class 1 AL539_12220 IPR013785 Aldolase-type TIM barrel AL539_12225 IPR007551 Protein of unknown function DUF520 AL539_12225 IPR035570 AL539_12225 AL539_12225 IPR035571 AL539_12225 AL539_12225 IPR036183 AL539_12225 AL539_12230 IPR006367 Sirohaem synthase, N-terminal AL539_12230 IPR019478 Sirohaem synthase, dimerisation domain AL539_12230 IPR028281 Siroheme synthase, central domain AL539_12230 IPR036291 AL539_12230 AL539_12230 IPR037115 AL539_12230 AL539_12240 IPR001638 Extracellular solute-binding protein, family 3 AL539_12245 IPR000515 MetI-like domain AL539_12245 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family AL539_12245 IPR035906 AL539_12245 AL539_12250 IPR000515 MetI-like domain AL539_12250 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family AL539_12250 IPR035906 AL539_12250 AL539_12255 IPR003439 ABC transporter-like AL539_12255 IPR003593 AAA+ ATPase domain AL539_12255 IPR017871 ABC transporter, conserved site AL539_12255 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_12255 IPR030679 AL539_12255 AL539_12260 IPR006213 Bax inhibitor 1, conserved site AL539_12260 IPR006214 Bax inhibitor 1-related AL539_12270 IPR007453 Sulphur transfer protein DsrC/TusE AL539_12270 IPR025526 DsrC-like domain AL539_12275 IPR001792 Acylphosphatase-like domain AL539_12275 IPR017968 Acylphosphatase, conserved site AL539_12275 IPR036046 AL539_12275 AL539_12280 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AL539_12285 IPR002478 PUA domain AL539_12285 IPR015947 PUA-like domain AL539_12285 IPR019614 S-adenosylmethionine-dependent methyltransferase AL539_12285 IPR023542 rRNA large subunit methyltransferase I AL539_12285 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like AL539_12285 IPR036974 AL539_12285 AL539_12295 IPR003423 Outer membrane efflux protein AL539_12295 IPR010130 Type I secretion outer membrane protein, TolC AL539_12300 IPR006664 Outer membrane protein, bacterial AL539_12300 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal AL539_12300 IPR028974 TSP type-3 repeat AL539_12300 IPR036737 AL539_12300 AL539_12325 IPR003423 Outer membrane efflux protein AL539_12325 IPR010130 Type I secretion outer membrane protein, TolC AL539_12330 IPR006664 Outer membrane protein, bacterial AL539_12330 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal AL539_12330 IPR036737 AL539_12330 AL539_12335 IPR021284 Protein of unknown function DUF2750 AL539_12340 IPR000160 GGDEF domain AL539_12340 IPR011990 Tetratricopeptide-like helical domain AL539_12340 IPR019734 Tetratricopeptide repeat AL539_12340 IPR029787 Nucleotide cyclase AL539_12345 IPR005471 Transcription regulator IclR, N-terminal AL539_12345 IPR014757 Transcription regulator IclR, C-terminal AL539_12345 IPR029016 GAF domain-like AL539_12345 IPR036388 AL539_12345 AL539_12345 IPR036390 AL539_12345 AL539_12350 IPR002347 Glucose/ribitol dehydrogenase AL539_12350 IPR036291 AL539_12350 AL539_12355 IPR018170 Aldo/keto reductase, conserved site AL539_12355 IPR020471 Aldo/keto reductase subgroup AL539_12355 IPR023210 NADP-dependent oxidoreductase domain AL539_12355 IPR036812 AL539_12355 AL539_12360 IPR000847 Transcription regulator HTH, LysR AL539_12360 IPR005119 LysR, substrate-binding AL539_12360 IPR036388 AL539_12360 AL539_12360 IPR036390 AL539_12360 AL539_12365 IPR011251 Luciferase-like domain AL539_12365 IPR020020 Luciferase-type oxidoreductase AL539_12365 IPR036661 AL539_12365 AL539_12370 IPR000847 Transcription regulator HTH, LysR AL539_12370 IPR005119 LysR, substrate-binding AL539_12370 IPR036388 AL539_12370 AL539_12370 IPR036390 AL539_12370 AL539_12375 IPR001958 Tetracycline resistance protein, TetA/multidrug resistance protein MdtG AL539_12375 IPR011701 Major facilitator superfamily AL539_12375 IPR036259 AL539_12375 AL539_12380 IPR001647 DNA-binding HTH domain, TetR-type AL539_12380 IPR009057 Homeodomain-like AL539_12385 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site AL539_12385 IPR011032 GroES (chaperonin 10)-like AL539_12385 IPR013149 Alcohol dehydrogenase, C-terminal AL539_12385 IPR013154 Alcohol dehydrogenase GroES-like AL539_12385 IPR020843 Polyketide synthase, enoylreductase AL539_12385 IPR036291 AL539_12385 AL539_12390 IPR002818 ThiJ/PfpI AL539_12390 IPR009057 Homeodomain-like AL539_12390 IPR018060 DNA binding HTH domain, AraC-type AL539_12390 IPR018062 HTH domain AraC-type, conserved site AL539_12390 IPR029062 Class I glutamine amidotransferase-like AL539_12395 IPR000868 Isochorismatase-like AL539_12395 IPR036380 AL539_12395 AL539_12400 IPR001320 Ionotropic glutamate receptor AL539_12400 IPR001638 Extracellular solute-binding protein, family 3 AL539_12400 IPR018313 Extracellular solute-binding protein, family 3, conserved site AL539_12405 IPR005524 Protein of unknown function DUF318, transmembrane AL539_12405 IPR036259 AL539_12405 AL539_12410 IPR011032 GroES (chaperonin 10)-like AL539_12410 IPR013149 Alcohol dehydrogenase, C-terminal AL539_12410 IPR013154 Alcohol dehydrogenase GroES-like AL539_12410 IPR020843 Polyketide synthase, enoylreductase AL539_12410 IPR036291 AL539_12410 AL539_12415 IPR003726 Homocysteine S-methyltransferase AL539_12415 IPR017226 Betaine-homocysteine S-methyltransferase, BHMT AL539_12415 IPR036589 AL539_12415 AL539_12420 IPR003439 ABC transporter-like AL539_12420 IPR003593 AAA+ ATPase domain AL539_12420 IPR017871 ABC transporter, conserved site AL539_12420 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_12420 IPR030679 AL539_12420 AL539_12425 IPR000515 MetI-like domain AL539_12425 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family AL539_12425 IPR035906 AL539_12425 AL539_12430 IPR001320 Ionotropic glutamate receptor AL539_12430 IPR001638 Extracellular solute-binding protein, family 3 AL539_12435 IPR016879 Uncharacterised conserved protein UCP028299 AL539_12440 IPR001897 Porin, gammaproteobacterial AL539_12440 IPR023614 Porin domain AL539_12445 IPR000847 Transcription regulator HTH, LysR AL539_12445 IPR005119 LysR, substrate-binding AL539_12445 IPR036388 AL539_12445 AL539_12445 IPR036390 AL539_12445 AL539_12450 IPR006143 RND efflux pump, membrane fusion protein AL539_12450 IPR032317 AL539_12450 AL539_12455 IPR001036 Acriflavin resistance protein AL539_12455 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 AL539_12455 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL539_12460 IPR000847 Transcription regulator HTH, LysR AL539_12460 IPR005119 LysR, substrate-binding AL539_12460 IPR036388 AL539_12460 AL539_12460 IPR036390 AL539_12460 AL539_12470 IPR000847 Transcription regulator HTH, LysR AL539_12470 IPR005119 LysR, substrate-binding AL539_12470 IPR036388 AL539_12470 AL539_12470 IPR036390 AL539_12470 AL539_12475 IPR001123 Lysine-type exporter protein (LYSE/YGGA) AL539_12480 IPR001387 Cro/C1-type helix-turn-helix domain AL539_12480 IPR010982 Lambda repressor-like, DNA-binding domain AL539_12485 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL539_12485 IPR018317 Queuosine biosynthesis protein QueC AL539_12490 IPR013785 Aldolase-type TIM barrel AL539_12490 IPR024924 7-carboxy-7-deazaguanine synthase-like AL539_12490 IPR027609 Putative 7-carboxy-7-deazaguanine synthase QueE, Proteobacteria AL539_12495 IPR000150 Cof protein AL539_12495 IPR006379 HAD-superfamily hydrolase, subfamily IIB AL539_12495 IPR023214 HAD-like domain AL539_12495 IPR036412 AL539_12495 AL539_12500 IPR000086 NUDIX hydrolase domain AL539_12500 IPR015797 NUDIX hydrolase domain-like AL539_12500 IPR020084 NUDIX hydrolase, conserved site AL539_12500 IPR036938 AL539_12500 AL539_12505 IPR001254 Peptidase S1 AL539_12505 IPR001314 Peptidase S1A, chymotrypsin-type AL539_12505 IPR003610 Carbohydrate-binding module family 5/12 AL539_12505 IPR009003 Trypsin-like cysteine/serine peptidase domain AL539_12505 IPR013783 Immunoglobulin-like fold AL539_12505 IPR018114 Peptidase S1, trypsin family, active site AL539_12505 IPR033116 AL539_12505 AL539_12505 IPR036573 AL539_12505 AL539_12510 IPR000182 GNAT domain AL539_12510 IPR016181 Acyl-CoA N-acyltransferase AL539_12515 IPR000873 AMP-dependent synthetase/ligase AL539_12515 IPR020845 AMP-binding, conserved site AL539_12515 IPR025110 AMP-binding enzyme C-terminal domain AL539_12515 IPR032387 AL539_12515 AL539_12520 IPR007400 PrpF protein AL539_12520 IPR012709 PrpF, AcnD-accessory AL539_12525 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel AL539_12525 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha AL539_12525 IPR006249 Aconitate/iron regulatory protein 2 AL539_12525 IPR012708 2-methylisocitrate dehydratase AcnD, Fe/S-dependent AL539_12525 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AL539_12525 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 AL539_12525 IPR036008 AL539_12525 AL539_12530 IPR002020 Citrate synthase-like AL539_12530 IPR011278 2-methylcitrate synthase/citrate synthase type I AL539_12530 IPR016142 Citrate synthase-like, large alpha subdomain AL539_12530 IPR016143 Citrate synthase-like, small alpha subdomain AL539_12530 IPR019810 Citrate synthase active site AL539_12530 IPR024176 Citrate synthase, bacterial-type AL539_12530 IPR036969 AL539_12530 AL539_12535 IPR012695 Methylisocitrate lyase AL539_12535 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain AL539_12535 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site AL539_12540 IPR000524 Transcription regulator HTH, GntR AL539_12540 IPR008920 Transcription regulator FadR/GntR, C-terminal AL539_12540 IPR011711 GntR, C-terminal AL539_12540 IPR036388 AL539_12540 AL539_12540 IPR036390 AL539_12540 AL539_12545 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V AL539_12545 IPR011057 Mss4-like AL539_12550 IPR005064 Bordetella uptake gene AL539_12555 IPR009936 Protein of unknown function DUF1468 AL539_12560 IPR002823 Protein of unknown function DUF112, transmembrane AL539_12565 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_12570 IPR002781 Transmembrane protein TauE like AL539_12575 IPR011852 TRAP transporter solute receptor, TAXI family AL539_12585 IPR008898 YopD-like AL539_12590 IPR006972 Secretion system effector C, SseC-like AL539_12595 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD AL539_12595 IPR011716 Tetratricopeptide TPR-3 AL539_12595 IPR011990 Tetratricopeptide-like helical domain AL539_12595 IPR016379 Type III secretion system, low calcium response, chaperone LcrH/SycD, subgroup AL539_12600 IPR005413 Low calcium response V antigen AL539_12600 IPR036139 AL539_12600 AL539_12605 IPR009863 Type III secretion protein, LcrG AL539_12610 IPR013405 Type III secretion system regulator, LcrR AL539_12610 IPR022797 Type III secretion system regulator LcrR/Chaperone CesD2 AL539_12615 IPR001712 Type III secretion system FHIPEP AL539_12615 IPR006302 Type III secretion protein HrcV AL539_12615 IPR025505 FHIPEP conserved site AL539_12620 IPR011990 Tetratricopeptide-like helical domain AL539_12620 IPR016684 Type III secretion system chaperone, YscY AL539_12625 IPR012672 Type III secretion system YscX AL539_12630 IPR012673 Type III secretion system chaperone SycN AL539_12635 IPR013351 Type III secretion system effector delivery regulator TyeA-related AL539_12635 IPR015144 Type III secretion system effector delivery regulator TyeA AL539_12635 IPR038347 AL539_12635 AL539_12640 IPR010812 Hypersensitivity response secretion-like, HrpJ AL539_12640 IPR013401 Type III secretion regulator, YopN/LcrE/InvE/MxiC AL539_12645 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain AL539_12645 IPR003593 AAA+ ATPase domain AL539_12645 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain AL539_12645 IPR005714 ATPase, type III secretion system, FliI/YscN AL539_12645 IPR013380 ATPase, type III secretion system, H+-transporting AL539_12645 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site AL539_12645 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_12650 IPR009929 Type III secretion sytem,YscO AL539_12655 IPR013354 Type III secretion system needle length determinant, C-terminal domain AL539_12660 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb AL539_12660 IPR001543 Surface presentation of antigen (SpoA) AL539_12660 IPR013385 Type III secretion system apparatus protein YscQ/HrcQ/SpaO AL539_12660 IPR036429 AL539_12660 AL539_12665 IPR005773 Yop virulence translocation protein R AL539_12665 IPR005838 Type III secretion system inner membrane P protein AL539_12670 IPR002191 Bacterial export protein family 3 AL539_12670 IPR006306 Type III secretion protein HrpO AL539_12675 IPR002010 Type III secretion system inner membrane R protein AL539_12675 IPR006304 Type III secretion protein SpaR/YscT AL539_12680 IPR006135 Type III secretion system substrate exporter AL539_12680 IPR006307 Type III exporter system, secretion apparatus protein BsaZ AL539_12680 IPR029025 Type III secretion system substrate exporter, C-terminal AL539_12685 IPR009057 Homeodomain-like AL539_12685 IPR011051 RmlC-like cupin domain AL539_12685 IPR014710 RmlC-like jelly roll fold AL539_12685 IPR018060 DNA binding HTH domain, AraC-type AL539_12685 IPR020449 Transcription regulator HTH, AraC- type AL539_12690 IPR000620 Drug/metabolite transporter AL539_12700 IPR010261 Tir chaperone protein (CesT) family AL539_12710 IPR010261 Tir chaperone protein (CesT) family AL539_12715 IPR003812 Fido domain AL539_12715 IPR036597 AL539_12715 AL539_12720 IPR010261 Tir chaperone protein (CesT) family AL539_12725 IPR012842 Type III secretion system HrpE/YscL AL539_12725 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE AL539_12730 IPR009510 Type III secretion system, secretion protein K AL539_12735 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ AL539_12735 IPR006182 Secretory protein YscJ/FliF AL539_12740 IPR012670 Type III secretion system, YscI/HrpB AL539_12745 IPR013349 Type III secretion system effector YopR AL539_12750 IPR011990 Tetratricopeptide-like helical domain AL539_12750 IPR013348 Type III secretion system YscG AL539_12755 IPR011841 Type III secretion system, needle protein AL539_12755 IPR021123 Type III secretion, needle-protein-like AL539_12755 IPR037203 AL539_12755 AL539_12760 IPR012671 Type III secretion system, secretion protein E AL539_12765 IPR012843 Type III secretion system YscD/HrpQ AL539_12765 IPR032030 AL539_12765 AL539_12765 IPR032034 AL539_12765 AL539_12770 IPR003522 Type III secretion system outer membrane pore YscC/HrcC AL539_12770 IPR004845 Type II secretion system GspD, conserved site AL539_12770 IPR004846 Type II/III secretion system AL539_12770 IPR005644 NolW-like AL539_12770 IPR038591 AL539_12770 AL539_12775 IPR010261 Tir chaperone protein (CesT) family AL539_12775 IPR013353 Type III secretion system chaperone YscB AL539_12780 IPR031835 AL539_12780 AL539_12785 IPR009057 Homeodomain-like AL539_12785 IPR018060 DNA binding HTH domain, AraC-type AL539_12785 IPR018062 HTH domain AraC-type, conserved site AL539_12785 IPR020449 Transcription regulator HTH, AraC- type AL539_12790 IPR013400 Type III secretion system chaperone, YscW AL539_12790 IPR039366 AL539_12790 AL539_12795 IPR010261 Tir chaperone protein (CesT) family AL539_12805 IPR015590 Aldehyde dehydrogenase domain AL539_12805 IPR016160 Aldehyde dehydrogenase, cysteine active site AL539_12805 IPR016161 Aldehyde/histidinol dehydrogenase AL539_12805 IPR016162 Aldehyde dehydrogenase, N-terminal AL539_12805 IPR016163 Aldehyde dehydrogenase, C-terminal AL539_12805 IPR029510 Aldehyde dehydrogenase, glutamic acid active site AL539_12810 IPR002078 RNA polymerase sigma factor 54 interaction domain AL539_12810 IPR002197 DNA binding HTH domain, Fis-type AL539_12810 IPR003018 GAF domain AL539_12810 IPR003593 AAA+ ATPase domain AL539_12810 IPR009057 Homeodomain-like AL539_12810 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AL539_12810 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AL539_12810 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_12810 IPR029016 GAF domain-like AL539_12825 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating AL539_12825 IPR006114 6-phosphogluconate dehydrogenase, C-terminal AL539_12825 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding AL539_12825 IPR006183 AL539_12825 AL539_12825 IPR006184 6-phosphogluconate-binding site AL539_12825 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like AL539_12825 IPR013328 Dehydrogenase, multihelical AL539_12825 IPR036291 AL539_12825 AL539_12830 IPR005900 6-phosphogluconolactonase, DevB-type AL539_12830 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase AL539_12830 IPR037171 AL539_12830 AL539_12835 IPR001282 Glucose-6-phosphate dehydrogenase AL539_12835 IPR019796 Glucose-6-phosphate dehydrogenase, active site AL539_12835 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding AL539_12835 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal AL539_12835 IPR036291 AL539_12835 AL539_12840 IPR009057 Homeodomain-like AL539_12840 IPR010499 Bacterial transcription activator, effector binding AL539_12840 IPR011256 Regulatory factor, effector binding domain AL539_12840 IPR018060 DNA binding HTH domain, AraC-type AL539_12840 IPR020449 Transcription regulator HTH, AraC- type AL539_12840 IPR029441 Integron-associated effector binding protein AL539_12845 IPR000531 TonB-dependent receptor, beta-barrel AL539_12845 IPR010105 TonB-dependent siderophore receptor AL539_12845 IPR010916 TonB box, conserved site AL539_12845 IPR012910 TonB-dependent receptor, plug AL539_12845 IPR036942 AL539_12845 AL539_12845 IPR037066 AL539_12845 AL539_12850 IPR001789 Signal transduction response regulator, receiver domain AL539_12850 IPR011006 CheY-like superfamily AL539_12850 IPR013196 Helix-turn-helix, type 11 AL539_12850 IPR024187 Signal transduction response regulator, citrate/malate metabolism AL539_12850 IPR028141 Transcriptional regulator AL539_12855 IPR000014 PAS domain AL539_12855 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_12855 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AL539_12855 IPR013767 PAS fold AL539_12855 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB AL539_12855 IPR029151 Periplasmic sensor domain-like AL539_12855 IPR033463 AL539_12855 AL539_12855 IPR035965 AL539_12855 AL539_12855 IPR036890 AL539_12855 AL539_12855 IPR039506 AL539_12855 AL539_12865 IPR003423 Outer membrane efflux protein AL539_12870 IPR039562 AL539_12870 AL539_12885 IPR000847 Transcription regulator HTH, LysR AL539_12885 IPR005119 LysR, substrate-binding AL539_12885 IPR036388 AL539_12885 AL539_12885 IPR036390 AL539_12885 AL539_12895 IPR002641 Patatin/Phospholipase A2-related AL539_12895 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AL539_12900 IPR004625 Pyridoxal phosphate (active vitamin B6) biosynthesis, pyridoxal kinase AL539_12900 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase AL539_12900 IPR029056 Ribokinase-like AL539_12905 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site AL539_12905 IPR004839 Aminotransferase, class I/classII AL539_12905 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 AL539_12905 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 AL539_12905 IPR015424 Pyridoxal phosphate-dependent transferase AL539_12905 IPR022518 Aspartate 4-decarboxylase AL539_12910 IPR006037 Regulator of K+ conductance, C-terminal AL539_12910 IPR006512 YidE/YbjL duplication AL539_12910 IPR022457 Aspartate-alanine antiporter AL539_12910 IPR036721 AL539_12910 AL539_12915 IPR012451 Protein of unknown function DUF1656 AL539_12920 IPR006143 RND efflux pump, membrane fusion protein AL539_12920 IPR032317 AL539_12920 AL539_12925 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein AL539_12940 IPR001736 Phospholipase D/Transphosphatidylase AL539_12940 IPR025202 Phospholipase D-like domain AL539_12950 IPR016596 Protein of unknown function UCP012335 AL539_12950 IPR022548 Domain of unknown function DUF2846 AL539_12955 IPR001123 Lysine-type exporter protein (LYSE/YGGA) AL539_12960 IPR001123 Lysine-type exporter protein (LYSE/YGGA) AL539_12965 IPR009874 Protein of unknown function DUF1428 AL539_12965 IPR011008 Dimeric alpha-beta barrel AL539_12970 IPR036291 AL539_12970 AL539_12975 IPR007138 Antibiotic biosynthesis monooxygenase-like domain AL539_12975 IPR011008 Dimeric alpha-beta barrel AL539_12980 IPR007138 Antibiotic biosynthesis monooxygenase-like domain AL539_12980 IPR011008 Dimeric alpha-beta barrel AL539_12985 IPR009000 Translation protein, beta-barrel domain AL539_12985 IPR012947 Threonyl/alanyl tRNA synthetase, SAD AL539_12985 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain AL539_12985 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal AL539_12990 IPR000182 GNAT domain AL539_12990 IPR016181 Acyl-CoA N-acyltransferase AL539_12995 IPR001451 Bacterial transferase hexapeptide repeat AL539_12995 IPR011004 Trimeric LpxA-like AL539_12995 IPR024688 Maltose/galactoside acetyltransferase AL539_13000 IPR010432 RDD AL539_13005 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain AL539_13005 IPR012349 FMN-binding split barrel AL539_13005 IPR024029 Pyridoxamine 5-phosphate oxidase, FMN-dependent AL539_13010 IPR011322 Nitrogen regulatory PII-like, alpha/beta AL539_13010 IPR018551 Domain of unknown function DUF2007 AL539_13020 IPR032032 AL539_13020 AL539_13020 IPR038314 AL539_13020 AL539_13025 IPR016181 Acyl-CoA N-acyltransferase AL539_13030 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family AL539_13030 IPR035093 AL539_13030 AL539_13030 IPR036165 AL539_13030 AL539_13045 IPR021681 Protein of unknown function DUF3265 AL539_13055 IPR006728 Protein of unknown function DUF600 AL539_13055 IPR036170 AL539_13055 AL539_13060 IPR021681 Protein of unknown function DUF3265 AL539_13070 IPR021681 Protein of unknown function DUF3265 AL539_13080 IPR021681 Protein of unknown function DUF3265 AL539_13105 IPR004624 PhnA protein AL539_13105 IPR013987 PhnA protein, N-terminal AL539_13105 IPR013988 PhnA protein, C-terminal AL539_13115 IPR021681 Protein of unknown function DUF3265 AL539_13135 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V AL539_13135 IPR011057 Mss4-like AL539_13155 IPR021681 Protein of unknown function DUF3265 AL539_13175 IPR021681 Protein of unknown function DUF3265 AL539_13195 IPR001584 Integrase, catalytic core AL539_13195 IPR012337 Ribonuclease H-like domain AL539_13200 IPR001584 Integrase, catalytic core AL539_13200 IPR012337 Ribonuclease H-like domain AL539_13200 IPR025948 HTH-like domain AL539_13200 IPR036397 AL539_13200 AL539_13205 IPR002514 Transposase IS3/IS911family AL539_13205 IPR009057 Homeodomain-like AL539_13210 IPR021681 Protein of unknown function DUF3265 AL539_13215 IPR000086 NUDIX hydrolase domain AL539_13215 IPR015797 NUDIX hydrolase domain-like AL539_13215 IPR020084 NUDIX hydrolase, conserved site AL539_13215 IPR020476 NUDIX hydrolase AL539_13240 IPR020353 Toxin YafO AL539_13260 IPR021681 Protein of unknown function DUF3265 AL539_13285 IPR021681 Protein of unknown function DUF3265 AL539_13290 IPR002818 ThiJ/PfpI AL539_13290 IPR029062 Class I glutamine amidotransferase-like AL539_13295 IPR025714 Methyltransferase domain AL539_13295 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like AL539_13315 IPR001452 SH3 domain AL539_13315 IPR014593 Uncharacterised conserved protein UCP034961, SH3-2 AL539_13315 IPR036028 AL539_13315 AL539_13325 IPR018841 Protein of unknown function DUF2442 AL539_13325 IPR036782 AL539_13325 AL539_13330 IPR025427 Protein of unknown function DUF4160 AL539_13335 IPR021681 Protein of unknown function DUF3265 AL539_13345 IPR021681 Protein of unknown function DUF3265 AL539_13350 IPR021866 SpoIIAA-like AL539_13350 IPR036513 AL539_13350 AL539_13350 IPR038396 AL539_13350 AL539_13360 IPR018958 SMI1/KNR4 like domain AL539_13360 IPR037883 AL539_13360 AL539_13365 IPR002575 Aminoglycoside phosphotransferase AL539_13365 IPR011009 Protein kinase-like domain AL539_13380 IPR021681 Protein of unknown function DUF3265 AL539_13385 IPR007337 RelB antitoxin/Antitoxin DinJ AL539_13385 IPR013321 Arc-type ribbon-helix-helix AL539_13390 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family AL539_13390 IPR035093 AL539_13390 AL539_13395 IPR009267 Protein of unknown function DUF925 AL539_13400 IPR021681 Protein of unknown function DUF3265 AL539_13410 IPR023346 Lysozyme-like domain AL539_13415 IPR021681 Protein of unknown function DUF3265 AL539_13420 IPR010394 5-nucleotidase AL539_13445 IPR021681 Protein of unknown function DUF3265 AL539_13450 IPR021681 Protein of unknown function DUF3265 AL539_13465 IPR021681 Protein of unknown function DUF3265 AL539_13485 IPR025668 Transposase DDE domain AL539_13495 IPR021681 Protein of unknown function DUF3265 AL539_13500 IPR021681 Protein of unknown function DUF3265 AL539_13510 IPR021681 Protein of unknown function DUF3265 AL539_13530 IPR021681 Protein of unknown function DUF3265 AL539_13550 IPR021681 Protein of unknown function DUF3265 AL539_13560 IPR021681 Protein of unknown function DUF3265 AL539_13570 IPR021681 Protein of unknown function DUF3265 AL539_13580 IPR021681 Protein of unknown function DUF3265 AL539_13600 IPR021681 Protein of unknown function DUF3265 AL539_13605 IPR011990 Tetratricopeptide-like helical domain AL539_13610 IPR021681 Protein of unknown function DUF3265 AL539_13625 IPR021856 Protein of unknown function DUF3465 AL539_13630 IPR021681 Protein of unknown function DUF3265 AL539_13640 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM AL539_13640 IPR036165 AL539_13640 AL539_13645 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family AL539_13645 IPR035093 AL539_13645 AL539_13660 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_13665 IPR000182 GNAT domain AL539_13665 IPR016181 Acyl-CoA N-acyltransferase AL539_13680 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family AL539_13680 IPR035093 AL539_13680 AL539_13685 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM AL539_13685 IPR036165 AL539_13685 AL539_13690 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family AL539_13690 IPR035093 AL539_13690 AL539_13695 IPR021681 Protein of unknown function DUF3265 AL539_13705 IPR000182 GNAT domain AL539_13705 IPR016181 Acyl-CoA N-acyltransferase AL539_13715 IPR021681 Protein of unknown function DUF3265 AL539_13730 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM AL539_13730 IPR036165 AL539_13730 AL539_13735 IPR021681 Protein of unknown function DUF3265 AL539_13745 IPR021681 Protein of unknown function DUF3265 AL539_13760 IPR021681 Protein of unknown function DUF3265 AL539_13770 IPR007685 RelA/SpoT AL539_13775 IPR002104 Integrase, catalytic AL539_13775 IPR004107 Integrase, SAM-like, N-terminal AL539_13775 IPR010998 Integrase, Lambda-type, N-terminal AL539_13775 IPR011010 DNA breaking-rejoining enzyme, catalytic core AL539_13775 IPR011946 Integrase, integron-type AL539_13775 IPR013762 Integrase-like, catalytic core AL539_13780 IPR021334 Protein of unknown function DUF2947 AL539_13785 IPR006674 HD domain AL539_13790 IPR000182 GNAT domain AL539_13790 IPR016181 Acyl-CoA N-acyltransferase AL539_13795 IPR000014 PAS domain AL539_13795 IPR002078 RNA polymerase sigma factor 54 interaction domain AL539_13795 IPR003593 AAA+ ATPase domain AL539_13795 IPR009057 Homeodomain-like AL539_13795 IPR013767 PAS fold AL539_13795 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AL539_13795 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AL539_13795 IPR025944 Sigma-54 interaction domain, conserved site AL539_13795 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_13795 IPR030828 AL539_13795 AL539_13795 IPR035965 AL539_13795 AL539_13800 IPR006507 Uncharacterised protein family UPF0283 AL539_13800 IPR021147 Protein of unknown function DUF697 AL539_13805 IPR007413 Protein of unknown function DUF463, YcjX-like protein AL539_13815 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain AL539_13815 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain AL539_13815 IPR011167 Iron-dependent fumarate hydratase AL539_13815 IPR036660 AL539_13815 AL539_13825 IPR005801 ADC synthase AL539_13825 IPR005802 Para-aminobenzoate synthase, component I AL539_13825 IPR006805 Anthranilate synthase component I, N-terminal AL539_13825 IPR015890 Chorismate binding, C-terminal AL539_13825 IPR019999 Anthranilate synthase component I - like AL539_13830 IPR001789 Signal transduction response regulator, receiver domain AL539_13830 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_13830 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain AL539_13830 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AL539_13830 IPR011006 CheY-like superfamily AL539_13830 IPR036097 AL539_13830 AL539_13830 IPR036890 AL539_13830 AL539_13835 IPR011644 Heme-NO binding AL539_13835 IPR024096 NO signalling/Golgi transport ligand-binding domain AL539_13835 IPR038158 AL539_13835 AL539_13840 IPR000086 NUDIX hydrolase domain AL539_13840 IPR015797 NUDIX hydrolase domain-like AL539_13845 IPR018227 Tryptophan/tyrosine permease AL539_13850 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form AL539_13850 IPR005130 Serine dehydratase-like, alpha subunit AL539_13850 IPR005131 Serine dehydratase beta chain AL539_13850 IPR029009 Allosteric substrate binding domain AL539_13855 IPR001633 EAL domain AL539_13855 IPR035919 AL539_13855 AL539_13860 IPR000182 GNAT domain AL539_13860 IPR016181 Acyl-CoA N-acyltransferase AL539_13865 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein AL539_13865 IPR038418 AL539_13865 AL539_13870 IPR003660 HAMP linker domain AL539_13870 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AL539_13870 IPR004090 Chemotaxis methyl-accepting receptor AL539_13875 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb AL539_13875 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) AL539_13875 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type AL539_13875 IPR004522 Asparagine-tRNA ligase AL539_13875 IPR012340 Nucleic acid-binding, OB-fold AL539_13885 IPR000524 Transcription regulator HTH, GntR AL539_13885 IPR004839 Aminotransferase, class I/classII AL539_13885 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 AL539_13885 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 AL539_13885 IPR015424 Pyridoxal phosphate-dependent transferase AL539_13885 IPR036388 AL539_13885 AL539_13885 IPR036390 AL539_13885 AL539_13900 IPR000796 Aspartate/other aminotransferase AL539_13900 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site AL539_13900 IPR004839 Aminotransferase, class I/classII AL539_13900 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 AL539_13900 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 AL539_13900 IPR015424 Pyridoxal phosphate-dependent transferase AL539_13905 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel AL539_13905 IPR027385 Outer membrane protein beta-barrel AL539_13910 IPR000595 Cyclic nucleotide-binding domain AL539_13910 IPR000644 CBS domain AL539_13910 IPR005105 Protein-PII uridylyltransferase, N-terminal AL539_13910 IPR014710 RmlC-like jelly roll fold AL539_13910 IPR018490 Cyclic nucleotide-binding-like AL539_13910 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding AL539_13915 IPR006054 DNA polymerase III, epsilon subunit AL539_13915 IPR012337 Ribonuclease H-like domain AL539_13915 IPR013520 Exonuclease, RNase T/DNA polymerase III AL539_13915 IPR036397 AL539_13915 AL539_13920 IPR003660 HAMP linker domain AL539_13920 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AL539_13920 IPR029151 Periplasmic sensor domain-like AL539_13920 IPR033479 AL539_13920 AL539_13925 IPR000060 BCCT transporter family AL539_13925 IPR018093 BCCT transporter, conserved site AL539_13930 IPR000835 MarR-type HTH domain AL539_13930 IPR036388 AL539_13930 AL539_13930 IPR036390 AL539_13930 AL539_13935 IPR000792 Transcription regulator LuxR, C-terminal AL539_13935 IPR001789 Signal transduction response regulator, receiver domain AL539_13935 IPR011006 CheY-like superfamily AL539_13935 IPR016032 Signal transduction response regulator, C-terminal effector AL539_13940 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_13940 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain AL539_13940 IPR017171 Signal transduction histidine kinase, MctS AL539_13940 IPR033480 AL539_13940 AL539_13940 IPR036890 AL539_13940 AL539_13945 IPR004681 TRAP transporter permease protein AL539_13945 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit AL539_13950 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component AL539_13955 IPR018389 Bacterial extracellular solute-binding protein, family 7 AL539_13955 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like AL539_13955 IPR038404 AL539_13955 AL539_13965 IPR021367 Protein of unknown function DUF2982 AL539_13970 IPR001279 Beta-lactamase-like AL539_13970 IPR036866 AL539_13970 AL539_13975 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain AL539_13975 IPR010275 Protein of unknown function DUF882 AL539_13975 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AL539_13980 IPR002477 Peptidoglycan binding-like AL539_13980 IPR005490 L,D-transpeptidase catalytic domain AL539_13980 IPR023346 Lysozyme-like domain AL539_13980 IPR038063 AL539_13980 AL539_13985 IPR008311 Uncharacterised conserved protein UCP028101 AL539_13985 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like AL539_13990 IPR018976 AL539_13990 AL539_13990 IPR038352 AL539_13990 AL539_13995 IPR010538 Protein of unknown function DUF1111 AL539_13995 IPR036909 AL539_13995 AL539_14000 IPR018976 AL539_14000 AL539_14000 IPR038352 AL539_14000 AL539_14005 IPR000926 GTP cyclohydrolase II, RibA AL539_14005 IPR032677 AL539_14005 AL539_14005 IPR036144 AL539_14005 AL539_14015 IPR005616 Cytochrome C biogenesis protein CcmH AL539_14015 IPR017565 Formate-dependent nitrite reductase complex, subunit NrfF AL539_14015 IPR038297 AL539_14015 AL539_14020 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE AL539_14020 IPR013740 Redoxin AL539_14020 IPR036249 AL539_14020 AL539_14025 IPR002541 Cytochrome c assembly protein AL539_14025 IPR003567 Cytochrome c-type biogenesis protein AL539_14025 IPR003568 Cytochrome c-type biogenesis protein CcmF AL539_14025 IPR032523 AL539_14025 AL539_14030 IPR005614 NrfD family AL539_14030 IPR017566 NrfD AL539_14035 IPR017567 Cytochrome c nitrite reductase, Fe-S protein AL539_14035 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL539_14035 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL539_14040 IPR010177 Doubled CXXCH motif AL539_14040 IPR017564 Cytochrome c nitrite reductase, pentahaem subunit AL539_14040 IPR036280 AL539_14040 AL539_14045 IPR003321 Cytochrome c552 AL539_14045 IPR017570 Formate-dependent cytochrome c nitrite reductase, c552 subunit AL539_14045 IPR036280 AL539_14045 AL539_14055 IPR011990 Tetratricopeptide-like helical domain AL539_14055 IPR013105 Tetratricopeptide TPR2 AL539_14060 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal AL539_14060 IPR005743 DNA gyrase, subunit A AL539_14060 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel AL539_14060 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain AL539_14060 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta AL539_14060 IPR013760 DNA topoisomerase, type IIA-like domain AL539_14060 IPR035516 AL539_14060 AL539_14065 IPR010233 Ubiquinone biosynthesis O-methyltransferase AL539_14065 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like AL539_14075 IPR000788 Ribonucleotide reductase large subunit, C-terminal AL539_14075 IPR005144 ATP-cone AL539_14075 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal AL539_14075 IPR013346 Ribonucleotide reductase, class I , alpha subunit AL539_14075 IPR013509 Ribonucleotide reductase large subunit, N-terminal AL539_14080 IPR000358 Ribonucleotide reductase small subunit AL539_14080 IPR009078 Ferritin-like superfamily AL539_14080 IPR012348 Ribonucleotide reductase-related AL539_14080 IPR030475 AL539_14080 AL539_14085 IPR001041 2Fe-2S ferredoxin-type domain AL539_14085 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site AL539_14085 IPR012675 Beta-grasp domain AL539_14085 IPR036010 AL539_14085 AL539_14090 IPR001453 Molybdopterin binding domain AL539_14090 IPR008135 Competence-induced protein CinA AL539_14090 IPR036425 AL539_14090 AL539_14090 IPR036653 AL539_14090 AL539_14095 IPR025079 Domain of unknown function DUF3943 AL539_14100 IPR016867 Glycine cleavage repressor GcvR AL539_14105 IPR005730 Carboxynorspermidine decarboxylase AL539_14105 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal AL539_14105 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal AL539_14105 IPR029066 PLP-binding barrel AL539_14110 IPR005097 Saccharopine dehydrogenase / Homospermidine synthase AL539_14110 IPR032095 AL539_14110 AL539_14110 IPR036291 AL539_14110 AL539_14115 IPR002129 Pyridoxal phosphate-dependent decarboxylase AL539_14115 IPR004637 2,4-diaminobutyrate 4-transaminase AL539_14115 IPR005814 Aminotransferase class-III AL539_14115 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 AL539_14115 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 AL539_14115 IPR015424 Pyridoxal phosphate-dependent transferase AL539_14140 IPR000462 CDP-alcohol phosphatidyltransferase AL539_14140 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase AL539_14145 IPR000305 GIY-YIG nuclease superfamily AL539_14145 IPR001162 UvrC family homology region AL539_14145 IPR001943 UVR domain AL539_14145 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 AL539_14145 IPR004791 UvrABC system, subunit C AL539_14145 IPR010994 RuvA domain 2-like AL539_14145 IPR035901 AL539_14145 AL539_14145 IPR036876 AL539_14145 AL539_14145 IPR038476 AL539_14145 AL539_14150 IPR000792 Transcription regulator LuxR, C-terminal AL539_14150 IPR001789 Signal transduction response regulator, receiver domain AL539_14150 IPR011006 CheY-like superfamily AL539_14150 IPR016032 Signal transduction response regulator, C-terminal effector AL539_14155 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain AL539_14155 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain AL539_14155 IPR006172 DNA-directed DNA polymerase, family B AL539_14155 IPR012337 Ribonuclease H-like domain AL539_14155 IPR017964 DNA-directed DNA polymerase, family B, conserved site AL539_14155 IPR023211 DNA polymerase, palm domain AL539_14155 IPR036397 AL539_14155 AL539_14165 IPR001059 Translation elongation factor P/YeiP, central AL539_14165 IPR008991 Translation protein SH3-like domain AL539_14165 IPR011897 Translation elongation factor P-like, YeiP AL539_14165 IPR012340 Nucleic acid-binding, OB-fold AL539_14165 IPR013185 Translation elongation factor, KOW-like AL539_14165 IPR013852 Translation elongation factor P/YeiP, conserved site AL539_14165 IPR014722 Ribosomal protein L2 domain 2 AL539_14165 IPR015365 Elongation factor P, C-terminal AL539_14165 IPR020599 Translation elongation factor P/YeiP AL539_14170 IPR007376 dsDNA mimic, putative AL539_14170 IPR036763 AL539_14170 AL539_14175 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F AL539_14175 IPR002942 RNA-binding S4 domain AL539_14175 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F AL539_14175 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site AL539_14175 IPR020103 Pseudouridine synthase, catalytic domain AL539_14175 IPR036986 AL539_14175 AL539_14180 IPR001343 Haemolysin-type calcium-binding repeat AL539_14180 IPR011049 Serralysin-like metalloprotease, C-terminal AL539_14180 IPR018511 Hemolysin-type calcium-binding conserved site AL539_14185 IPR006070 YrdC-like domain AL539_14185 IPR017945 DHBP synthase RibB-like alpha/beta domain AL539_14190 IPR003141 Polymerase/histidinol phosphatase, N-terminal AL539_14190 IPR004013 PHP, C-terminal AL539_14190 IPR016195 Polymerase/histidinol phosphatase-like AL539_14195 IPR012639 Tryptophan operon leader peptide AL539_14200 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial AL539_14200 IPR005801 ADC synthase AL539_14200 IPR006805 Anthranilate synthase component I, N-terminal AL539_14200 IPR015890 Chorismate binding, C-terminal AL539_14200 IPR019999 Anthranilate synthase component I - like AL539_14205 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain AL539_14205 IPR017926 Glutamine amidotransferase AL539_14205 IPR029062 Class I glutamine amidotransferase-like AL539_14210 IPR000312 Glycosyl transferase, family 3 AL539_14210 IPR005940 Anthranilate phosphoribosyl transferase AL539_14210 IPR017459 Glycosyl transferase family 3, N-terminal domain AL539_14210 IPR035902 AL539_14210 AL539_14210 IPR036320 AL539_14210 AL539_14215 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) like domain AL539_14215 IPR001468 Indole-3-glycerol phosphate synthase, conserved site AL539_14215 IPR011060 Ribulose-phosphate binding barrel AL539_14215 IPR013785 Aldolase-type TIM barrel AL539_14215 IPR013798 Indole-3-glycerol phosphate synthase AL539_14220 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AL539_14220 IPR006653 Tryptophan synthase, beta chain, conserved site AL539_14220 IPR006654 Tryptophan synthase, beta chain AL539_14220 IPR023026 Tryptophan synthase beta chain/beta chain-like AL539_14220 IPR036052 AL539_14220 AL539_14225 IPR002028 Tryptophan synthase, alpha chain AL539_14225 IPR011060 Ribulose-phosphate binding barrel AL539_14225 IPR013785 Aldolase-type TIM barrel AL539_14225 IPR018204 Tryptophan synthase, alpha chain, active site AL539_14230 IPR000595 Cyclic nucleotide-binding domain AL539_14230 IPR012318 Helix-turn-helix motif, Crp-type AL539_14230 IPR014710 RmlC-like jelly roll fold AL539_14230 IPR018490 Cyclic nucleotide-binding-like AL539_14230 IPR036388 AL539_14230 AL539_14230 IPR036390 AL539_14230 AL539_14235 IPR000873 AMP-dependent synthetase/ligase AL539_14235 IPR020845 AMP-binding, conserved site AL539_14235 IPR025110 AMP-binding enzyme C-terminal domain AL539_14245 IPR001991 Sodium:dicarboxylate symporter AL539_14245 IPR036458 AL539_14245 AL539_14250 IPR020374 Homoserine lactone synthase, LuxM/VanM, N-terminal AL539_14250 IPR020384 Homoserine lactone synthase, LuxM/VanM, C-terminal AL539_14250 IPR035304 AL539_14250 AL539_14255 IPR001789 Signal transduction response regulator, receiver domain AL539_14255 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_14255 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain AL539_14255 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AL539_14255 IPR011006 CheY-like superfamily AL539_14255 IPR036097 AL539_14255 AL539_14255 IPR036890 AL539_14255 AL539_14265 IPR006008 Intracellular septation protein A AL539_14270 IPR006683 Thioesterase superfamily AL539_14270 IPR029069 HotDog domain AL539_14275 IPR005545 YCII-related AL539_14275 IPR011008 Dimeric alpha-beta barrel AL539_14280 IPR016502 Uncharacterised conserved protein UCP007010 AL539_14285 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal AL539_14285 IPR006276 Cobalamin-independent methionine synthase AL539_14285 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal AL539_14285 IPR038071 AL539_14285 AL539_14290 IPR000847 Transcription regulator HTH, LysR AL539_14290 IPR005119 LysR, substrate-binding AL539_14290 IPR036388 AL539_14290 AL539_14290 IPR036390 AL539_14290 AL539_14295 IPR025346 Protein of unknown function DUF4250 AL539_14305 IPR000014 PAS domain AL539_14305 IPR000644 CBS domain AL539_14305 IPR001633 EAL domain AL539_14305 IPR013767 PAS fold AL539_14305 IPR035919 AL539_14305 AL539_14305 IPR035965 AL539_14305 AL539_14310 IPR006638 Elongator protein 3/MiaB/NifB AL539_14310 IPR007197 Radical SAM AL539_14310 IPR013704 Uncharacterised protein family UPF0313, N-terminal AL539_14310 IPR020612 Methylthiotransferase, conserved site AL539_14310 IPR022946 Uncharacterised protein family UPF0313 AL539_14310 IPR023404 Radical SAM, alpha/beta horseshoe AL539_14310 IPR024560 Uncharacterised protein family UPF0313, C-terminal AL539_14330 IPR007267 GtrA-like protein AL539_14335 IPR003342 Glycosyl transferase, family 39 AL539_14340 IPR001173 Glycosyltransferase 2-like AL539_14340 IPR029044 Nucleotide-diphospho-sugar transferases AL539_14345 IPR001789 Signal transduction response regulator, receiver domain AL539_14345 IPR001867 Signal transduction response regulator, C-terminal AL539_14345 IPR011006 CheY-like superfamily AL539_14345 IPR016032 Signal transduction response regulator, C-terminal effector AL539_14345 IPR036388 AL539_14345 AL539_14350 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_14350 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain AL539_14350 IPR036097 AL539_14350 AL539_14350 IPR036890 AL539_14350 AL539_14355 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase AL539_14355 IPR036052 AL539_14355 AL539_14360 IPR000868 Isochorismatase-like AL539_14360 IPR036380 AL539_14360 AL539_14365 IPR000847 Transcription regulator HTH, LysR AL539_14365 IPR005119 LysR, substrate-binding AL539_14365 IPR036388 AL539_14365 AL539_14365 IPR036390 AL539_14365 AL539_14370 IPR039562 AL539_14370 AL539_14375 IPR016926 Uncharacterised conserved protein UCP029594 AL539_14375 IPR022604 Protein of unknown function DUF2955 AL539_14380 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal AL539_14380 IPR016456 Predicted cobalamin-independent methionine synthase, catalytic subunit AL539_14380 IPR038071 AL539_14380 AL539_14385 IPR015004 Protein of unknown function DUF1852 AL539_14390 IPR016183 Leukocidin/porin AL539_14390 IPR036435 AL539_14390 AL539_14400 IPR003439 ABC transporter-like AL539_14400 IPR003593 AAA+ ATPase domain AL539_14400 IPR017871 ABC transporter, conserved site AL539_14400 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_14405 IPR003838 Permease FtsX-like AL539_14405 IPR025857 MacB-like periplasmic core domain AL539_14410 IPR003838 Permease FtsX-like AL539_14410 IPR025857 MacB-like periplasmic core domain AL539_14415 IPR003423 Outer membrane efflux protein AL539_14420 IPR006143 RND efflux pump, membrane fusion protein AL539_14420 IPR032317 AL539_14420 AL539_14430 IPR007921 CHAP domain AL539_14430 IPR013423 Conserved hypothetical protein CHP02594 AL539_14440 IPR013766 Thioredoxin domain AL539_14440 IPR017937 Thioredoxin, conserved site AL539_14440 IPR036249 AL539_14440 AL539_14445 IPR003834 Cytochrome c assembly protein, transmembrane domain AL539_14445 IPR017937 Thioredoxin, conserved site AL539_14445 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain AL539_14445 IPR036249 AL539_14445 AL539_14455 IPR000792 Transcription regulator LuxR, C-terminal AL539_14455 IPR001789 Signal transduction response regulator, receiver domain AL539_14455 IPR011006 CheY-like superfamily AL539_14455 IPR016032 Signal transduction response regulator, C-terminal effector AL539_14455 IPR036388 AL539_14455 AL539_14460 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_14460 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain AL539_14460 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AL539_14460 IPR036097 AL539_14460 AL539_14460 IPR036890 AL539_14460 AL539_14465 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL539_14465 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL539_14470 IPR005614 NrfD family AL539_14475 IPR006656 Molybdopterin oxidoreductase AL539_14475 IPR006657 Molydopterin dinucleotide-binding domain AL539_14475 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain AL539_14475 IPR009010 Aspartate decarboxylase-like domain AL539_14480 IPR009056 Cytochrome c-like domain AL539_14480 IPR024167 Cytochrome c4 AL539_14480 IPR036909 AL539_14480 AL539_14485 IPR009056 Cytochrome c-like domain AL539_14485 IPR036909 AL539_14485 AL539_14490 IPR005219 Conserved hypothetical protein CHP00155 AL539_14490 IPR007498 Paraquat-inducible protein A AL539_14495 IPR003399 Mammalian cell entry-related AL539_14500 IPR005586 Protein of unknown function DUF330 AL539_14515 IPR000914 Bacterial extracellular solute-binding protein, family 5 AL539_14515 IPR030678 AL539_14515 AL539_14520 IPR001754 Orotidine 5'-phosphate decarboxylase domain AL539_14520 IPR011060 Ribulose-phosphate binding barrel AL539_14520 IPR013785 Aldolase-type TIM barrel AL539_14520 IPR014732 Orotidine 5'-phosphate decarboxylase AL539_14520 IPR018089 Orotidine 5'-phosphate decarboxylase, active site AL539_14525 IPR011990 Tetratricopeptide-like helical domain AL539_14525 IPR019734 Tetratricopeptide repeat AL539_14525 IPR030865 AL539_14525 AL539_14530 IPR010445 Protein of unknown function DUF1049 AL539_14530 IPR032906 AL539_14530 AL539_14535 IPR000119 Histone-like bacterial DNA-binding protein AL539_14535 IPR005685 Integration host factor, beta subunit AL539_14535 IPR010992 Integration host factor (IHF)-like DNA-binding domain AL539_14535 IPR020816 Histone-like DNA-binding protein, conserved site AL539_14540 IPR000110 Ribosomal protein S1 AL539_14540 IPR003029 Ribosomal protein S1, RNA-binding domain AL539_14540 IPR012340 Nucleic acid-binding, OB-fold AL539_14540 IPR022967 RNA-binding domain, S1 AL539_14545 IPR003136 Cytidylate kinase AL539_14545 IPR011994 Cytidylate kinase domain AL539_14545 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_14550 IPR002142 Peptidase S49 AL539_14550 IPR013703 Peptidase S49, N-terminal proteobacteria AL539_14550 IPR029045 ClpP/crotonase-like domain AL539_14555 IPR002347 Glucose/ribitol dehydrogenase AL539_14555 IPR020904 Short-chain dehydrogenase/reductase, conserved site AL539_14555 IPR036291 AL539_14555 AL539_14560 IPR013765 DNA recombination and repair protein RecA AL539_14560 IPR017166 Uncharacterised conserved protein UCP037290 AL539_14560 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_14565 IPR001126 DNA-repair protein, UmuC-like AL539_14570 IPR003141 Polymerase/histidinol phosphatase, N-terminal AL539_14570 IPR004013 PHP, C-terminal AL539_14570 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type AL539_14570 IPR004805 DNA polymerase III, alpha subunit AL539_14570 IPR011708 Bacterial DNA polymerase III, alpha subunit AL539_14570 IPR023073 DNA polymerase, error-prone AL539_14570 IPR029460 DNA polymerase, helix-hairpin-helix motif AL539_14575 IPR001789 Signal transduction response regulator, receiver domain AL539_14575 IPR002545 CheW-like protein AL539_14575 IPR011006 CheY-like superfamily AL539_14575 IPR024181 Chemotaxis response regulator CheV AL539_14575 IPR036061 AL539_14575 AL539_14580 IPR000600 ROK AL539_14580 IPR036388 AL539_14580 AL539_14580 IPR036390 AL539_14580 AL539_14585 IPR001697 Pyruvate kinase AL539_14585 IPR011037 Pyruvate kinase-like, insert domain AL539_14585 IPR015793 Pyruvate kinase, barrel AL539_14585 IPR015795 Pyruvate kinase, C-terminal AL539_14585 IPR015806 Pyruvate kinase, beta-barrel insert domain AL539_14585 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain AL539_14585 IPR018209 Pyruvate kinase, active site AL539_14585 IPR036918 AL539_14585 AL539_14590 IPR002641 Patatin/Phospholipase A2-related AL539_14590 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AL539_14600 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel AL539_14600 IPR027385 Outer membrane protein beta-barrel AL539_14605 IPR000175 Sodium:neurotransmitter symporter AL539_14605 IPR037272 AL539_14605 AL539_14615 IPR001996 Phosphotransferase system, IIB component, type 1 AL539_14615 IPR003352 Phosphotransferase system, EIIC AL539_14615 IPR011299 PTS system glucose-specific IIBC component AL539_14615 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site AL539_14615 IPR036878 AL539_14615 AL539_14620 IPR001130 TatD family AL539_14620 IPR015991 Uncharacterised deoxyribonuclease TatD-type AL539_14620 IPR018228 Deoxyribonuclease, TatD-related, conserved site AL539_14620 IPR032466 AL539_14620 AL539_14625 IPR004622 DNA polymerase III, delta prime subunit AL539_14625 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal AL539_14625 IPR015199 DNA polymerase III, delta subunit, C-terminal AL539_14625 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_14630 IPR018094 Thymidylate kinase AL539_14630 IPR018095 Thymidylate kinase, conserved site AL539_14630 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_14630 IPR039430 AL539_14630 AL539_14635 IPR003770 Uncharacterised protein family UPF0755, YceG-like AL539_14640 IPR001544 Aminotransferase, class IV AL539_14640 IPR017824 Aminodeoxychorismate lyase, class IV AL539_14640 IPR018300 Aminotransferase, class IV, conserved site AL539_14640 IPR036038 AL539_14640 AL539_14645 IPR014030 Beta-ketoacyl synthase, N-terminal AL539_14645 IPR014031 Beta-ketoacyl synthase, C-terminal AL539_14645 IPR016039 Thiolase-like AL539_14645 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 AL539_14645 IPR018201 Beta-ketoacyl synthase, active site AL539_14645 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AL539_14650 IPR003231 Acyl carrier protein (ACP) AL539_14650 IPR006162 Phosphopantetheine attachment site AL539_14650 IPR009081 Acyl carrier protein-like AL539_14650 IPR036736 AL539_14650 AL539_14655 IPR002347 Glucose/ribitol dehydrogenase AL539_14655 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase AL539_14655 IPR020904 Short-chain dehydrogenase/reductase, conserved site AL539_14655 IPR036291 AL539_14655 AL539_14660 IPR001227 Acyl transferase domain AL539_14660 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type AL539_14660 IPR014043 Acyl transferase AL539_14660 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AL539_14660 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding AL539_14660 IPR020801 Polyketide synthase, acyl transferase domain AL539_14660 IPR024925 Malonyl CoA-acyl carrier protein transacylase AL539_14665 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 AL539_14665 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal AL539_14665 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AL539_14665 IPR016039 Thiolase-like AL539_14670 IPR003664 Fatty acid synthesis PlsX protein AL539_14670 IPR012281 Phospholipid biosynthesis protein, PlsX-like AL539_14675 IPR002677 Ribosomal protein L32p AL539_14675 IPR011332 Zinc-binding ribosomal protein AL539_14680 IPR003772 Protein of unknown function DUF177 AL539_14685 IPR003697 Maf-like protein AL539_14685 IPR029001 Inosine triphosphate pyrophosphatase-like AL539_14690 IPR002942 RNA-binding S4 domain AL539_14690 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F AL539_14690 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site AL539_14690 IPR006225 Pseudouridine synthase, RluC/RluD AL539_14690 IPR020103 Pseudouridine synthase, catalytic domain AL539_14690 IPR036986 AL539_14690 AL539_14700 IPR003029 Ribosomal protein S1, RNA-binding domain AL539_14700 IPR004659 Ribonuclease E/G AL539_14700 IPR012340 Nucleic acid-binding, OB-fold AL539_14700 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G AL539_14700 IPR022967 RNA-binding domain, S1 AL539_14700 IPR028878 Ribonuclease E AL539_14710 IPR002645 STAS domain AL539_14710 IPR011547 Sulphate transporter AL539_14710 IPR036513 AL539_14710 AL539_14715 IPR017867 Protein-tyrosine phosphatase, low molecular weight AL539_14715 IPR023485 Phosphotyrosine protein phosphatase I superfamily AL539_14715 IPR036196 AL539_14715 AL539_14720 IPR003724 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR AL539_14720 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain AL539_14720 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_14725 IPR007844 AsmA AL539_14730 IPR000764 Uridine kinase like AL539_14730 IPR006083 Phosphoribulokinase/uridine kinase AL539_14730 IPR026008 Uridine kinase AL539_14730 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_14735 IPR000808 Mrp, conserved site AL539_14735 IPR019591 Mrp/NBP35 ATP-binding protein AL539_14735 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_14735 IPR033756 AL539_14735 AL539_14740 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site AL539_14740 IPR002547 tRNA-binding domain AL539_14740 IPR004495 Methionyl-tRNA synthetase, class Ia, beta subunit, C-terminal AL539_14740 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding AL539_14740 IPR012340 Nucleic acid-binding, OB-fold AL539_14740 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL539_14740 IPR014758 Methionyl-tRNA synthetase AL539_14740 IPR015413 Methionyl/Leucyl tRNA synthetase AL539_14740 IPR023458 Methionine-tRNA ligase, type 1 AL539_14740 IPR029038 Methionyl-tRNA synthetase, Zn-domain AL539_14740 IPR033911 AL539_14740 AL539_14765 IPR000524 Transcription regulator HTH, GntR AL539_14765 IPR008920 Transcription regulator FadR/GntR, C-terminal AL539_14765 IPR014178 Fatty acid response transcription factor FadR AL539_14765 IPR028374 FadR, C-terminal domain AL539_14765 IPR036388 AL539_14765 AL539_14765 IPR036390 AL539_14765 AL539_14770 IPR004671 Na+/H+ antiporter NhaB AL539_14775 IPR003752 Disulphide bond formation protein DsbB/BdbC AL539_14775 IPR022920 Disulphide bond formation protein DsbB AL539_14775 IPR023380 Disulphide bond formation protein DsbB-like domain AL539_14780 IPR004027 SEC-C motif AL539_14780 IPR011978 Uncharacterised protein family UPF0149 AL539_14785 IPR001269 tRNA-dihydrouridine synthase AL539_14785 IPR013785 Aldolase-type TIM barrel AL539_14785 IPR018517 tRNA-dihydrouridine synthase, conserved site AL539_14785 IPR032886 AL539_14785 AL539_14790 IPR000160 GGDEF domain AL539_14790 IPR029787 Nucleotide cyclase AL539_14795 IPR004185 Glycoside hydrolase, family 13, N-terminal Ig-like domain AL539_14795 IPR006047 Glycosyl hydrolase, family 13, catalytic domain AL539_14795 IPR013780 Glycosyl hydrolase, family 13, all-beta AL539_14795 IPR013783 Immunoglobulin-like fold AL539_14795 IPR014756 Immunoglobulin E-set AL539_14795 IPR017069 Maltodextrin glucosidase AL539_14795 IPR017853 Glycoside hydrolase, superfamily AL539_14800 IPR003439 ABC transporter-like AL539_14800 IPR003593 AAA+ ATPase domain AL539_14800 IPR017871 ABC transporter, conserved site AL539_14800 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_14805 IPR001851 ABC transporter, permease AL539_14810 IPR007487 ABC transporter, substrate-binding protein AL539_14810 IPR028082 Periplasmic binding protein-like I AL539_14815 IPR007334 Uncharacterised protein family UPF0208 AL539_14820 IPR000890 Aliphatic acid kinase, short-chain AL539_14820 IPR004372 Acetate/Proprionate kinase AL539_14820 IPR023865 Aliphatic acid kinase, short-chain, conserved site AL539_14825 IPR002505 Phosphate acetyl/butaryl transferase AL539_14825 IPR004614 Phosphate acetyltransferase AL539_14825 IPR010766 DRTGG AL539_14825 IPR016475 Phosphate acetyltransferase, bacteria AL539_14825 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_14825 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain like AL539_14835 IPR004045 Glutathione S-transferase, N-terminal AL539_14835 IPR016639 Glutathione S-transferase (GST) AL539_14835 IPR036249 AL539_14835 AL539_14835 IPR036282 AL539_14835 AL539_14840 IPR003439 ABC transporter-like AL539_14840 IPR003593 AAA+ ATPase domain AL539_14840 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal AL539_14840 IPR017871 ABC transporter, conserved site AL539_14840 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_14845 IPR003439 ABC transporter-like AL539_14845 IPR003593 AAA+ ATPase domain AL539_14845 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal AL539_14845 IPR017871 ABC transporter, conserved site AL539_14845 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_14850 IPR000515 MetI-like domain AL539_14850 IPR025966 Oligopeptide transport permease C-like, N-terminal domain AL539_14850 IPR035906 AL539_14850 AL539_14855 IPR000515 MetI-like domain AL539_14855 IPR035906 AL539_14855 AL539_14860 IPR000914 Bacterial extracellular solute-binding protein, family 5 AL539_14860 IPR023765 Bacterial extracellular solute-binding protein, family 5, conserved site AL539_14860 IPR030678 AL539_14860 AL539_14870 IPR003448 Molybdopterin biosynthesis MoaE AL539_14870 IPR036563 AL539_14870 AL539_14875 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 AL539_14875 IPR012675 Beta-grasp domain AL539_14875 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp AL539_14880 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain AL539_14880 IPR023045 Molybdenum cofactor biosynthesis C AL539_14880 IPR036522 AL539_14880 AL539_14885 IPR001453 Molybdopterin binding domain AL539_14885 IPR008284 Molybdenum cofactor biosynthesis, conserved site AL539_14885 IPR012245 Molybdenum cofactor biosynthesis protein MoaB AL539_14885 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria AL539_14885 IPR036425 AL539_14885 AL539_14890 IPR006638 Elongator protein 3/MiaB/NifB AL539_14890 IPR007197 Radical SAM AL539_14890 IPR010505 Molybdenum cofactor synthesis C-terminal AL539_14890 IPR013483 Molybdenum cofactor biosynthesis protein A AL539_14890 IPR013785 Aldolase-type TIM barrel AL539_14895 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 AL539_14895 IPR010119 Gluconeogenesis factor AL539_14895 IPR038136 AL539_14895 AL539_14900 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain AL539_14900 IPR036641 AL539_14900 AL539_14905 IPR001789 Signal transduction response regulator, receiver domain AL539_14905 IPR002078 RNA polymerase sigma factor 54 interaction domain AL539_14905 IPR002197 DNA binding HTH domain, Fis-type AL539_14905 IPR003593 AAA+ ATPase domain AL539_14905 IPR009057 Homeodomain-like AL539_14905 IPR011006 CheY-like superfamily AL539_14905 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AL539_14905 IPR025944 Sigma-54 interaction domain, conserved site AL539_14905 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_14910 IPR001650 Helicase, C-terminal AL539_14910 IPR001943 UVR domain AL539_14910 IPR004807 UvrABC system, subunit B AL539_14910 IPR006935 Helicase/UvrB domain AL539_14910 IPR014001 Helicase, superfamily 1/2, ATP-binding domain AL539_14910 IPR024759 UvrB, YAD/RRR-motif-containing domain AL539_14910 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_14910 IPR036876 AL539_14910 AL539_14920 IPR001150 Glycine radical domain AL539_14920 IPR004184 Pyruvate formate lyase domain AL539_14920 IPR005949 Formate acetyltransferase AL539_14920 IPR019777 Formate C-acetyltransferase glycine radical, conserved site AL539_14925 IPR003667 Electron transport complex, Rnf/Nqr AL539_14925 IPR011293 Electron transport complex, RnfA AL539_14930 IPR007202 4Fe-4S domain AL539_14930 IPR010207 Electron transport complex, RnfB AL539_14930 IPR016463 Electron transport complex, RnfB, Proteobacteria AL539_14930 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL539_14935 IPR009051 Alpha-helical ferredoxin AL539_14935 IPR010208 Electron transport complex protein RnfC AL539_14935 IPR011538 NADH:ubiquinone oxidoreductase, 51kDa subunit AL539_14935 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL539_14935 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL539_14935 IPR019554 Soluble ligand binding domain AL539_14935 IPR026902 RnfC Barrel sandwich hybrid domain AL539_14935 IPR037225 AL539_14935 AL539_14940 IPR004338 NADH-quinone reductase NQR2/RnfD AL539_14940 IPR011303 Electron transport complex, RnfD AL539_14945 IPR007329 FMN-binding AL539_14945 IPR010209 Electron transport complex, RnfG AL539_14950 IPR003667 Electron transport complex, Rnf/Nqr AL539_14950 IPR010968 Electron transport complex, RnfE AL539_14955 IPR000445 Helix-hairpin-helix motif AL539_14955 IPR003265 HhH-GPD domain AL539_14955 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif AL539_14955 IPR004035 Endonuclease III, iron-sulphur binding site AL539_14955 IPR004036 Endonuclease III-like, conserved site-2 AL539_14955 IPR005759 Endonuclease III AL539_14955 IPR011257 DNA glycosylase AL539_14955 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal AL539_14960 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AL539_14960 IPR004361 Glyoxalase I AL539_14960 IPR018146 Glyoxalase I, conserved site AL539_14960 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL539_14965 IPR020206 Uncharacterised protein family, VP2110 AL539_14970 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal AL539_14970 IPR006690 Outer membrane protein, OmpA-like, conserved site AL539_14970 IPR036737 AL539_14970 AL539_14980 IPR005987 Ribonuclease T AL539_14980 IPR012337 Ribonuclease H-like domain AL539_14980 IPR013520 Exonuclease, RNase T/DNA polymerase III AL539_14980 IPR036397 AL539_14980 AL539_14985 IPR018461 Na+/H+ antiporter, NhaC-like AL539_14985 IPR032813 AL539_14985 AL539_14990 IPR036249 AL539_14990 AL539_15005 IPR002109 Glutaredoxin AL539_15005 IPR004480 Monothiol glutaredoxin-related AL539_15005 IPR014434 Monothiol glutaredoxin AL539_15005 IPR036249 AL539_15005 AL539_15010 IPR001189 Manganese/iron superoxide dismutase AL539_15010 IPR019831 Manganese/iron superoxide dismutase, N-terminal AL539_15010 IPR019832 Manganese/iron superoxide dismutase, C-terminal AL539_15010 IPR019833 Manganese/iron superoxide dismutase, binding site AL539_15010 IPR036314 AL539_15010 AL539_15010 IPR036324 AL539_15010 AL539_15015 IPR021879 Ribosomal S4P (gammaproteobacterial) AL539_15020 IPR002347 Glucose/ribitol dehydrogenase AL539_15020 IPR036291 AL539_15020 AL539_15025 IPR001670 Alcohol dehydrogenase, iron-type AL539_15025 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase AL539_15025 IPR015590 Aldehyde dehydrogenase domain AL539_15025 IPR016161 Aldehyde/histidinol dehydrogenase AL539_15025 IPR016162 Aldehyde dehydrogenase, N-terminal AL539_15025 IPR016163 Aldehyde dehydrogenase, C-terminal AL539_15025 IPR018211 Alcohol dehydrogenase, iron-type, conserved site AL539_15030 IPR002771 Multiple antibiotic resistance (MarC)-related AL539_15035 IPR005821 Ion transport domain AL539_15035 IPR027359 Voltage-dependent channel, four helix bundle domain AL539_15035 IPR028325 Voltage-gated potassium channel AL539_15040 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site AL539_15040 IPR000534 Semialdehyde dehydrogenase, NAD-binding AL539_15040 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type AL539_15040 IPR012080 Aspartate-semialdehyde dehydrogenase AL539_15040 IPR012280 Semialdehyde dehydrogenase, dimerisation domain AL539_15040 IPR036291 AL539_15040 AL539_15045 IPR004770 Na+/H+ antiporter NhaC AL539_15045 IPR018461 Na+/H+ antiporter, NhaC-like AL539_15055 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain AL539_15055 IPR036641 AL539_15055 AL539_15060 IPR007358 Nucleoid-associated protein NdpA AL539_15065 IPR009857 Uncharacterised protein family UPF0352 AL539_15065 IPR023202 YejL-like domain AL539_15070 IPR000917 Sulfatase AL539_15070 IPR012159 Membrane sulfatase, HI0842-related AL539_15070 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha AL539_15070 IPR017850 Alkaline-phosphatase-like, core domain AL539_15070 IPR024588 Membrane sulfatase, HI0842-related, N-terminal domain AL539_15080 IPR000286 Histone deacetylase superfamily AL539_15080 IPR023696 Ureohydrolase domain AL539_15080 IPR023801 Histone deacetylase domain AL539_15080 IPR037138 AL539_15080 AL539_15085 IPR002347 Glucose/ribitol dehydrogenase AL539_15085 IPR036291 AL539_15085 AL539_15095 IPR003601 DNA topoisomerase, type IA, domain 2 AL539_15095 IPR003602 DNA topoisomerase, type IA, DNA-binding domain AL539_15095 IPR005738 DNA topoisomerase III AL539_15095 IPR006171 Toprim domain AL539_15095 IPR013497 DNA topoisomerase, type IA, central AL539_15095 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 AL539_15095 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 AL539_15095 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 AL539_15095 IPR023405 DNA topoisomerase, type IA, core domain AL539_15095 IPR023406 DNA topoisomerase, type IA, active site AL539_15100 IPR000415 Nitroreductase-like AL539_15100 IPR026021 Putative NAD(P)H nitroreductase YdjA-like AL539_15100 IPR029479 Nitroreductase AL539_15105 IPR011701 Major facilitator superfamily AL539_15105 IPR036259 AL539_15105 AL539_15110 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal AL539_15110 IPR013785 Aldolase-type TIM barrel AL539_15110 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain AL539_15110 IPR036188 AL539_15110 AL539_15115 IPR002142 Peptidase S49 AL539_15115 IPR004634 Peptidase S49, protease IV AL539_15115 IPR004635 Peptidase S49, SppA AL539_15115 IPR029045 ClpP/crotonase-like domain AL539_15120 IPR006033 L-asparaginase, type I AL539_15120 IPR006034 Asparaginase/glutaminase AL539_15120 IPR020827 Asparaginase/glutaminase, active site 1 AL539_15120 IPR027473 L-asparaginase, C-terminal domain AL539_15120 IPR027474 L-asparaginase, N-terminal AL539_15120 IPR027475 Asparaginase/glutaminase, active site 2 AL539_15120 IPR036152 AL539_15120 AL539_15120 IPR037152 AL539_15120 AL539_15125 IPR009749 Protein of unknown function DUF1315 AL539_15130 IPR021372 Protein of unknown function DUF2989 AL539_15135 IPR002579 Peptide methionine sulphoxide reductase MrsB AL539_15135 IPR011057 Mss4-like AL539_15140 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I AL539_15140 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain AL539_15140 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain AL539_15140 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site AL539_15140 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family AL539_15140 IPR036291 AL539_15140 AL539_15145 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase AL539_15145 IPR011013 Galactose mutarotase-like domain AL539_15145 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup AL539_15145 IPR025532 Glucose-6-phosphate 1-epimerase AL539_15150 IPR003660 HAMP linker domain AL539_15150 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AL539_15150 IPR029151 Periplasmic sensor domain-like AL539_15150 IPR033462 AL539_15150 AL539_15155 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted AL539_15155 IPR025714 Methyltransferase domain AL539_15155 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like AL539_15160 IPR007314 Domain of unknown function DUF399 AL539_15160 IPR016773 Ferric uptake regulator, CjrA, predicted AL539_15175 IPR001952 Alkaline phosphatase AL539_15175 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha AL539_15175 IPR017850 Alkaline-phosphatase-like, core domain AL539_15175 IPR018299 Alkaline phosphatase, active site AL539_15180 IPR027373 Ribbon-helix-helix domain AL539_15180 IPR038268 AL539_15180 AL539_15185 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AL539_15185 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL539_15190 IPR007138 Antibiotic biosynthesis monooxygenase-like domain AL539_15190 IPR011008 Dimeric alpha-beta barrel AL539_15195 IPR006685 Mechanosensitive ion channel MscS AL539_15195 IPR010920 Like-Sm (LSM) domain AL539_15195 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 AL539_15195 IPR011066 Mechanosensitive ion channel MscS, C-terminal AL539_15195 IPR023408 AL539_15195 AL539_15200 IPR005358 Putative zinc- or iron-chelating domain containing protein AL539_15200 IPR008228 Uncharacterised conserved protein UCP006173 AL539_15205 IPR007341 Transglycosylase-associated protein AL539_15210 IPR005358 Putative zinc- or iron-chelating domain containing protein AL539_15215 IPR000425 Major intrinsic protein AL539_15215 IPR022357 Major intrinsic protein, conserved site AL539_15215 IPR023271 Aquaporin-like AL539_15215 IPR023743 Aquaporin Z AL539_15220 IPR000093 DNA recombination protein RecR AL539_15220 IPR006171 Toprim domain AL539_15220 IPR015967 Recombination protein RecR, conserved site AL539_15220 IPR023627 Recombination protein RecR AL539_15220 IPR023628 Recombination protein RecR, C4-type zinc finger AL539_15225 IPR004401 Nucleoid-associated protein YbaB AL539_15225 IPR036894 AL539_15225 AL539_15230 IPR003593 AAA+ ATPase domain AL539_15230 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal AL539_15230 IPR012763 DNA polymerase III, subunit gamma/ tau AL539_15230 IPR021029 DNA polymerase III, tau subunit, domain V AL539_15230 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV AL539_15230 IPR022754 DNA polymerase III, gamma subunit, domain III AL539_15230 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_15230 IPR038249 AL539_15230 AL539_15235 IPR000836 Phosphoribosyltransferase domain AL539_15235 IPR005764 Adenine phosphoribosyl transferase AL539_15235 IPR029057 Phosphoribosyltransferase-like AL539_15240 IPR007401 Protein of unknown function DUF454 AL539_15250 IPR001789 Signal transduction response regulator, receiver domain AL539_15250 IPR011006 CheY-like superfamily AL539_15250 IPR036457 AL539_15250 AL539_15255 IPR000847 Transcription regulator HTH, LysR AL539_15255 IPR005119 LysR, substrate-binding AL539_15255 IPR036388 AL539_15255 AL539_15255 IPR036390 AL539_15255 AL539_15260 IPR000836 Phosphoribosyltransferase domain AL539_15260 IPR005854 Amidophosphoribosyl transferase AL539_15260 IPR029055 Nucleophile aminohydrolases, N-terminal AL539_15260 IPR029057 Phosphoribosyltransferase-like AL539_15265 IPR003825 Colicin V production, CvpA AL539_15270 IPR007730 Sporulation-related domain AL539_15270 IPR036680 AL539_15270 AL539_15275 IPR001645 Folylpolyglutamate synthetase AL539_15275 IPR013221 Mur ligase, central AL539_15275 IPR018109 Folylpolyglutamate synthetase, conserved site AL539_15275 IPR036565 AL539_15275 AL539_15275 IPR036615 AL539_15275 AL539_15280 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit AL539_15280 IPR029045 ClpP/crotonase-like domain AL539_15280 IPR034733 AL539_15280 AL539_15290 IPR001406 Pseudouridine synthase I, TruA AL539_15290 IPR020095 Pseudouridine synthase I, TruA, C-terminal AL539_15290 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain AL539_15290 IPR020103 Pseudouridine synthase, catalytic domain AL539_15295 IPR020011 Motility protein FimV, C-terminal AL539_15295 IPR020012 Motility protein FimV, N-terminal AL539_15295 IPR038440 AL539_15295 AL539_15300 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site AL539_15300 IPR000534 Semialdehyde dehydrogenase, NAD-binding AL539_15300 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type AL539_15300 IPR012080 Aspartate-semialdehyde dehydrogenase AL539_15300 IPR012280 Semialdehyde dehydrogenase, dimerisation domain AL539_15300 IPR036291 AL539_15300 AL539_15305 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AL539_15305 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain AL539_15305 IPR020921 Erythronate-4-phosphate dehydrogenase AL539_15305 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain AL539_15305 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AL539_15305 IPR036291 AL539_15305 AL539_15305 IPR038251 AL539_15305 AL539_15315 IPR014030 Beta-ketoacyl synthase, N-terminal AL539_15315 IPR014031 Beta-ketoacyl synthase, C-terminal AL539_15315 IPR016039 Thiolase-like AL539_15315 IPR018201 Beta-ketoacyl synthase, active site AL539_15315 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AL539_15320 IPR006076 FAD dependent oxidoreductase AL539_15320 IPR008471 MnmC-like methyltransferase AL539_15320 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal AL539_15320 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC AL539_15320 IPR036188 AL539_15320 AL539_15325 IPR005025 NADPH-dependent FMN reductase-like AL539_15325 IPR029039 Flavoprotein-like AL539_15335 IPR014987 Uncharacterised protein family YfcL AL539_15340 IPR007411 Protein of unknown function DUF462 AL539_15350 IPR005115 Uncharacterised domain UPF0126 AL539_15355 IPR000453 Chorismate synthase AL539_15355 IPR020541 Chorismate synthase, conserved site AL539_15355 IPR035904 AL539_15355 AL539_15360 IPR002052 DNA methylase, N-6 adenine-specific, conserved site AL539_15360 IPR004556 Modification methylase HemK AL539_15360 IPR007848 Methyltransferase small domain AL539_15360 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase AL539_15360 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like AL539_15365 IPR002625 Smr protein/MutS2 C-terminal AL539_15365 IPR022990 Uncharacterised protein family UPF0115 AL539_15365 IPR036063 AL539_15365 AL539_15370 IPR004449 Phosphohistidine phosphatase SixA, subgroup AL539_15370 IPR013078 Histidine phosphatase superfamily, clade-1 AL539_15370 IPR029033 Histidine phosphatase superfamily AL539_15375 IPR001431 Peptidase M16, zinc-binding site AL539_15375 IPR007863 Peptidase M16, C-terminal domain AL539_15375 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like AL539_15375 IPR011765 Peptidase M16, N-terminal AL539_15375 IPR032632 AL539_15375 AL539_15385 IPR001753 Crotonase superfamily AL539_15385 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal AL539_15385 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding AL539_15385 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site AL539_15385 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like AL539_15385 IPR012802 Fatty oxidation complex, alpha subunit FadJ AL539_15385 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site AL539_15385 IPR029045 ClpP/crotonase-like domain AL539_15385 IPR036291 AL539_15385 AL539_15390 IPR002155 Thiolase AL539_15390 IPR012806 Acetyl-CoA C-acyltransferase FadI AL539_15390 IPR016039 Thiolase-like AL539_15390 IPR020613 Thiolase, conserved site AL539_15390 IPR020616 Thiolase, N-terminal AL539_15390 IPR020617 Thiolase, C-terminal AL539_15400 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site AL539_15400 IPR007627 RNA polymerase sigma-70 region 2 AL539_15400 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 AL539_15400 IPR013324 RNA polymerase sigma factor, region 3/4 AL539_15400 IPR013325 RNA polymerase sigma factor, region 2 AL539_15400 IPR014284 RNA polymerase sigma-70 like domain AL539_15400 IPR036388 AL539_15400 AL539_15405 IPR021806 Protein of unknown function DUF3379 AL539_15410 IPR005017 Membrane protein, aromatic hydrocarbon degradation AL539_15415 IPR005017 Membrane protein, aromatic hydrocarbon degradation AL539_15420 IPR002104 Integrase, catalytic AL539_15420 IPR011010 DNA breaking-rejoining enzyme, catalytic core AL539_15420 IPR013762 Integrase-like, catalytic core AL539_15430 IPR011010 DNA breaking-rejoining enzyme, catalytic core AL539_15440 IPR009476 Protein of unknown function DUF1097 AL539_15445 IPR009215 TIM-barrel domain, IGPS-like AL539_15445 IPR013785 Aldolase-type TIM barrel AL539_15445 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain AL539_15450 IPR008322 Uncharacterised protein family UPF0261 AL539_15455 IPR001647 DNA-binding HTH domain, TetR-type AL539_15455 IPR009057 Homeodomain-like AL539_15460 IPR007428 VacJ-like lipoprotein AL539_15465 IPR011990 Tetratricopeptide-like helical domain AL539_15465 IPR017560 Cytochrome c-type biogenesis protein CcmI AL539_15470 IPR005616 Cytochrome C biogenesis protein CcmH AL539_15470 IPR038297 AL539_15470 AL539_15475 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE AL539_15475 IPR013740 Redoxin AL539_15475 IPR017937 Thioredoxin, conserved site AL539_15475 IPR036249 AL539_15475 AL539_15480 IPR002541 Cytochrome c assembly protein AL539_15480 IPR003567 Cytochrome c-type biogenesis protein AL539_15480 IPR003568 Cytochrome c-type biogenesis protein CcmF AL539_15480 IPR032523 AL539_15480 AL539_15485 IPR004329 CcmE/CycJ protein AL539_15485 IPR036127 AL539_15485 AL539_15490 IPR007078 Haem exporter protein D (CcmD) AL539_15495 IPR002541 Cytochrome c assembly protein AL539_15495 IPR003557 Cytochrome c-type biogenesis protein CcmC AL539_15500 IPR003544 Cytochrome c-type biogenesis protein CcmB AL539_15500 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria AL539_15505 IPR003439 ABC transporter-like AL539_15505 IPR003593 AAA+ ATPase domain AL539_15505 IPR005895 ABC transporter, haem export, CcmA AL539_15505 IPR017871 ABC transporter, conserved site AL539_15505 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_15510 IPR021244 Protein of unknown function DUF2802 AL539_15515 IPR002545 CheW-like protein AL539_15515 IPR036061 AL539_15515 AL539_15520 IPR002545 CheW-like protein AL539_15520 IPR014506 Uncharacterised conserved protein UCP020479, signal transduction CheW-like AL539_15520 IPR036061 AL539_15520 AL539_15525 IPR025669 AAA domain AL539_15525 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_15530 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase AL539_15530 IPR001789 Signal transduction response regulator, receiver domain AL539_15530 IPR008248 Signal transduction response regulator, chemotaxis, CheB AL539_15530 IPR011006 CheY-like superfamily AL539_15530 IPR035909 AL539_15530 AL539_15535 IPR002545 CheW-like protein AL539_15535 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_15535 IPR004105 Histidine kinase CheA-like, homodimeric domain AL539_15535 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AL539_15535 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain AL539_15535 IPR036061 AL539_15535 AL539_15535 IPR036097 AL539_15535 AL539_15535 IPR036641 AL539_15535 AL539_15535 IPR036890 AL539_15535 AL539_15535 IPR037006 AL539_15535 AL539_15540 IPR007439 Chemotaxis phosphatase, CheZ AL539_15545 IPR001789 Signal transduction response regulator, receiver domain AL539_15545 IPR011006 CheY-like superfamily AL539_15550 IPR000943 RNA polymerase sigma-70 AL539_15550 IPR007624 RNA polymerase sigma-70 region 3 AL539_15550 IPR007627 RNA polymerase sigma-70 region 2 AL539_15550 IPR007630 RNA polymerase sigma-70 region 4 AL539_15550 IPR012845 RNA polymerase sigma factor, FliA/WhiG AL539_15550 IPR013324 RNA polymerase sigma factor, region 3/4 AL539_15550 IPR013325 RNA polymerase sigma factor, region 2 AL539_15550 IPR014284 RNA polymerase sigma-70 like domain AL539_15550 IPR028617 RNA polymerase sigma factor FliA AL539_15555 IPR025501 ATP binding protein MinD AL539_15555 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_15555 IPR033756 AL539_15555 AL539_15560 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain AL539_15560 IPR003593 AAA+ ATPase domain AL539_15560 IPR020006 Signal-recognition particle (SRP)-type GTPase AL539_15560 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_15565 IPR001712 Type III secretion system FHIPEP AL539_15565 IPR006301 Flagellar biosynthesis protein FlhA AL539_15565 IPR025505 FHIPEP conserved site AL539_15570 IPR006135 Type III secretion system substrate exporter AL539_15570 IPR006136 Type III exporter system, flagellar biosynthetic protein FlhB AL539_15570 IPR029025 Type III secretion system substrate exporter, C-terminal AL539_15575 IPR002010 Type III secretion system inner membrane R protein AL539_15575 IPR006303 Flagellar biosynthesis protein FliR AL539_15580 IPR002191 Bacterial export protein family 3 AL539_15580 IPR006305 Flagellar biosynthesis protein FliQ AL539_15585 IPR005837 Flagellar transport protein FliP AL539_15585 IPR005838 Type III secretion system inner membrane P protein AL539_15590 IPR022781 Flagellar biosynthesis protein, FliO AL539_15595 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb AL539_15595 IPR001543 Surface presentation of antigen (SpoA) AL539_15595 IPR012826 Flagellar motor switch FliN AL539_15595 IPR036429 AL539_15595 AL539_15600 IPR001543 Surface presentation of antigen (SpoA) AL539_15600 IPR001689 Flagellar motor switch protein FliM AL539_15600 IPR028976 CheC-like domain AL539_15600 IPR036429 AL539_15600 AL539_15605 IPR005503 Flagellar basal body-associated protein FliL AL539_15610 IPR021136 Flagellar hook-length control protein-like, C-terminal AL539_15610 IPR038610 AL539_15610 AL539_15615 IPR011008 Dimeric alpha-beta barrel AL539_15615 IPR012577 NIPSNAP AL539_15620 IPR012823 Flagellar export FliJ AL539_15625 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain AL539_15625 IPR003593 AAA+ ATPase domain AL539_15625 IPR005714 ATPase, type III secretion system, FliI/YscN AL539_15625 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site AL539_15625 IPR020005 Flagellar export ATPase FliI, clade 1 AL539_15625 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_15630 IPR000563 Flagellar assembly protein FliH AL539_15630 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE AL539_15635 IPR000090 Flagellar motor switch protein FliG AL539_15635 IPR011002 Flagellar motor switch protein FliG, alpha-helical AL539_15635 IPR023087 AL539_15635 AL539_15635 IPR028263 Flagellar motor switch protein FliG, N-terminal domain AL539_15635 IPR032779 AL539_15635 AL539_15640 IPR000067 Flagellar M-ring protein FliF AL539_15640 IPR006182 Secretory protein YscJ/FliF AL539_15640 IPR013556 Flagellar M-ring C-terminal AL539_15645 IPR001624 Flagellar hook-basal body complex protein FliE AL539_15650 IPR001789 Signal transduction response regulator, receiver domain AL539_15650 IPR002078 RNA polymerase sigma factor 54 interaction domain AL539_15650 IPR002197 DNA binding HTH domain, Fis-type AL539_15650 IPR003593 AAA+ ATPase domain AL539_15650 IPR009057 Homeodomain-like AL539_15650 IPR011006 CheY-like superfamily AL539_15650 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AL539_15650 IPR025944 Sigma-54 interaction domain, conserved site AL539_15650 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_15655 IPR000014 PAS domain AL539_15655 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_15655 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain AL539_15655 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AL539_15655 IPR035965 AL539_15655 AL539_15655 IPR036097 AL539_15655 AL539_15655 IPR036890 AL539_15655 AL539_15660 IPR002078 RNA polymerase sigma factor 54 interaction domain AL539_15660 IPR002197 DNA binding HTH domain, Fis-type AL539_15660 IPR003593 AAA+ ATPase domain AL539_15660 IPR009057 Homeodomain-like AL539_15660 IPR010518 Flagellar regulatory FleQ AL539_15660 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AL539_15660 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AL539_15660 IPR025944 Sigma-54 interaction domain, conserved site AL539_15660 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_15665 IPR003713 Flagellar protein FliS AL539_15665 IPR036584 AL539_15665 AL539_15675 IPR003481 Flagellar hook-associated protein 2, N-terminal AL539_15675 IPR010809 Flagellar hook-associated 2, C-terminal AL539_15675 IPR010810 Flagellin hook, IN motif AL539_15680 IPR005186 Flagellar protein FlaG protein AL539_15680 IPR035924 AL539_15680 AL539_15685 IPR001029 Flagellin, D0/D1 domain AL539_15685 IPR001492 Flagellin AL539_15685 IPR010810 Flagellin hook, IN motif AL539_15690 IPR001029 Flagellin, D0/D1 domain AL539_15690 IPR001492 Flagellin AL539_15690 IPR010810 Flagellin hook, IN motif AL539_15700 IPR001029 Flagellin, D0/D1 domain AL539_15700 IPR001492 Flagellin AL539_15700 IPR010810 Flagellin hook, IN motif AL539_15705 IPR006314 Dyp-type peroxidase AL539_15705 IPR011008 Dimeric alpha-beta barrel AL539_15710 IPR021318 Protein of unknown function DUF2919 AL539_15715 IPR021339 Protein of unknown function DUF2956 AL539_15720 IPR025294 Protein of unknown function DUF4156 AL539_15725 IPR017162 Uncharacterised conserved protein UCP037266 AL539_15725 IPR036388 AL539_15725 AL539_15730 IPR006504 Transcriptional regulator Spx/MgsR AL539_15730 IPR006660 Arsenate reductase-like AL539_15730 IPR036249 AL539_15730 AL539_15735 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site AL539_15735 IPR002933 Peptidase M20 AL539_15735 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria AL539_15735 IPR011650 Peptidase M20, dimerisation domain AL539_15735 IPR036264 AL539_15735 AL539_15740 IPR003709 Peptidase M15B/M15C AL539_15740 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain AL539_15745 IPR021550 Protein of unknown function DUF2897 AL539_15750 IPR010653 Lipoprotein, NlpB AL539_15750 IPR014524 Outer membrane protein assembly factor BamC AL539_15755 IPR002220 DapA-like AL539_15755 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA AL539_15755 IPR013785 Aldolase-type TIM barrel AL539_15755 IPR020624 Dihydrodipicolinate synthetase, conserved site AL539_15755 IPR020625 Dihydrodipicolinate synthetase, active site AL539_15760 IPR016867 Glycine cleavage repressor GcvR AL539_15765 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant AL539_15765 IPR024706 Peroxiredoxin, AhpC-type AL539_15765 IPR036249 AL539_15765 AL539_15770 IPR002549 Uncharacterised protein family UPF0118 AL539_15775 IPR001455 TusA-like domain AL539_15775 IPR036868 AL539_15775 AL539_15780 IPR001915 Peptidase M48 AL539_15780 IPR011990 Tetratricopeptide-like helical domain AL539_15780 IPR019734 Tetratricopeptide repeat AL539_15780 IPR030873 AL539_15780 AL539_15785 IPR006659 Arsenate reductase AL539_15785 IPR006660 Arsenate reductase-like AL539_15785 IPR036249 AL539_15785 AL539_15790 IPR001226 Flavodoxin, conserved site AL539_15790 IPR005025 NADPH-dependent FMN reductase-like AL539_15790 IPR010089 Flavoprotein WrbA AL539_15790 IPR029039 Flavoprotein-like AL539_15795 IPR018643 Protein of unknown function DUF2069, membrane AL539_15800 IPR018642 Protein of unknown function DUF2066 AL539_15805 IPR006042 Xanthine/uracil permease AL539_15805 IPR006043 Xanthine/uracil/vitamin C permease AL539_15810 IPR005765 Uracil phosphoribosyl transferase AL539_15810 IPR029057 Phosphoribosyltransferase-like AL539_15810 IPR034332 AL539_15810 AL539_15815 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase AL539_15815 IPR010918 AIR synthase-related protein, C-terminal domain AL539_15815 IPR016188 PurM, N-terminal-like AL539_15815 IPR036676 AL539_15815 AL539_15815 IPR036921 AL539_15815 AL539_15820 IPR001555 Phosphoribosylglycinamide formyltransferase, active site AL539_15820 IPR002376 Formyl transferase, N-terminal AL539_15820 IPR004607 Phosphoribosylglycinamide formyltransferase AL539_15820 IPR036477 AL539_15820 AL539_15825 IPR026869 Putative glutamine amidotransferase type 2 AL539_15825 IPR029055 Nucleophile aminohydrolases, N-terminal AL539_15830 IPR001347 Sugar isomerase (SIS) AL539_15830 IPR004515 Phosphoheptose isomerase AL539_15835 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AL539_15835 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain AL539_15835 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AL539_15835 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type AL539_15835 IPR036250 AL539_15835 AL539_15835 IPR037069 AL539_15835 AL539_15840 IPR002645 STAS domain AL539_15840 IPR011547 Sulphate transporter AL539_15840 IPR036513 AL539_15840 AL539_15845 IPR000182 GNAT domain AL539_15845 IPR016181 Acyl-CoA N-acyltransferase AL539_15850 IPR010767 Campylobacter phage CGC-2007, Cje0229 AL539_15860 IPR020010 Conserved hypothetical protein CHP03503 AL539_15865 IPR006054 DNA polymerase III, epsilon subunit AL539_15865 IPR006309 DNA polymerase 3, epsilon subunit AL539_15865 IPR012337 Ribonuclease H-like domain AL539_15865 IPR013520 Exonuclease, RNase T/DNA polymerase III AL539_15865 IPR036397 AL539_15865 AL539_15870 IPR002156 Ribonuclease H domain AL539_15870 IPR012337 Ribonuclease H-like domain AL539_15870 IPR022892 Ribonuclease H AL539_15870 IPR036397 AL539_15870 AL539_15875 IPR013216 Methyltransferase type 11 AL539_15875 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like AL539_15880 IPR001279 Beta-lactamase-like AL539_15880 IPR017782 Hydroxyacylglutathione hydrolase AL539_15880 IPR032282 AL539_15880 AL539_15880 IPR036866 AL539_15880 AL539_15885 IPR000189 Prokaryotic transglycosylase, active site AL539_15885 IPR008258 Lytic transglycosylase-like SLT domain AL539_15885 IPR018392 LysM domain AL539_15885 IPR023346 Lysozyme-like domain AL539_15885 IPR036779 AL539_15885 AL539_15890 IPR009698 Protein of unknown function DUF1282 AL539_15895 IPR005135 Endonuclease/exonuclease/phosphatase AL539_15895 IPR022958 Uncharacterised protein family UPF0294 AL539_15895 IPR036691 AL539_15895 AL539_15900 IPR002187 Nitrogen regulatory protein PII AL539_15900 IPR002332 Nitrogen regulatory protein P-II, urydylation site AL539_15900 IPR011322 Nitrogen regulatory PII-like, alpha/beta AL539_15900 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal AL539_15900 IPR017918 Nitrogen regulatory protein PII, conserved site AL539_15905 IPR008168 Cytochrome c, class IC AL539_15905 IPR009056 Cytochrome c-like domain AL539_15905 IPR036909 AL539_15905 AL539_15910 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase AL539_15910 IPR012094 Lysidine-tRNA(Ile) synthetase AL539_15910 IPR012795 Lysidine-tRNA(Ile) synthetase, N-terminal AL539_15910 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal AL539_15910 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL539_15910 IPR015262 Lysidine-tRNA(Ile) synthetase, substrate-binding domain AL539_15915 IPR001095 Acetyl-CoA carboxylase, alpha subunit AL539_15915 IPR029045 ClpP/crotonase-like domain AL539_15920 IPR003141 Polymerase/histidinol phosphatase, N-terminal AL539_15920 IPR004013 PHP, C-terminal AL539_15920 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type AL539_15920 IPR004805 DNA polymerase III, alpha subunit AL539_15920 IPR011708 Bacterial DNA polymerase III, alpha subunit AL539_15920 IPR012340 Nucleic acid-binding, OB-fold AL539_15920 IPR016195 Polymerase/histidinol phosphatase-like AL539_15920 IPR029460 DNA polymerase, helix-hairpin-helix motif AL539_15925 IPR012337 Ribonuclease H-like domain AL539_15925 IPR022898 Ribonuclease HII AL539_15925 IPR024567 Ribonuclease HII/HIII domain AL539_15925 IPR036397 AL539_15925 AL539_15930 IPR003835 Glycosyl transferase, family 19 AL539_15935 IPR001451 Bacterial transferase hexapeptide repeat AL539_15935 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase AL539_15935 IPR011004 Trimeric LpxA-like AL539_15935 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal AL539_15935 IPR037157 AL539_15935 AL539_15940 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ AL539_15940 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ AL539_15940 IPR029069 HotDog domain AL539_15945 IPR001451 Bacterial transferase hexapeptide repeat AL539_15945 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase AL539_15945 IPR011004 Trimeric LpxA-like AL539_15945 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region AL539_15950 IPR005632 Chaperone protein Skp AL539_15950 IPR024930 Skp domain AL539_15955 IPR000184 Bacterial surface antigen (D15) AL539_15955 IPR010827 Surface antigen variable number AL539_15955 IPR023707 Outer membrane protein assembly factor BamA AL539_15960 IPR001478 PDZ domain AL539_15960 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase AL539_15960 IPR008915 Peptidase M50 AL539_15960 IPR036034 AL539_15960 AL539_15965 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase AL539_15965 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal AL539_15965 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal AL539_15965 IPR026877 DXP reductoisomerase C-terminal domain AL539_15965 IPR036169 AL539_15965 AL539_15965 IPR036291 AL539_15965 AL539_15970 IPR000374 Phosphatidate cytidylyltransferase AL539_15975 IPR001441 Decaprenyl diphosphate synthase-like AL539_15975 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site AL539_15975 IPR036424 AL539_15975 AL539_15980 IPR002661 Ribosome recycling factor AL539_15980 IPR023584 Ribosome recycling factor domain AL539_15980 IPR036191 AL539_15980 AL539_15985 IPR001048 Aspartate/glutamate/uridylate kinase AL539_15985 IPR011817 Uridylate kinase AL539_15985 IPR015963 Uridylate kinase, bacteria AL539_15985 IPR036393 AL539_15985 AL539_15990 IPR001816 Translation elongation factor EFTs/EF1B AL539_15990 IPR009060 UBA-like AL539_15990 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation AL539_15990 IPR018101 Translation elongation factor Ts, conserved site AL539_15990 IPR036402 AL539_15990 AL539_15995 IPR001865 Ribosomal protein S2 AL539_15995 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid AL539_15995 IPR018130 Ribosomal protein S2, conserved site AL539_15995 IPR023591 Ribosomal protein S2, flavodoxin-like domain AL539_16000 IPR000994 Peptidase M24, structural domain AL539_16000 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 AL539_16000 IPR036005 AL539_16000 AL539_16005 IPR002912 ACT domain AL539_16005 IPR002934 Nucleotidyl transferase domain AL539_16005 IPR003607 HD/PDEase domain AL539_16005 IPR006674 HD domain AL539_16005 IPR010043 Protein-PII uridylyltransferase AL539_16005 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase AL539_16010 IPR020911 Uncharacterised protein family UPF0325 AL539_16015 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F AL539_16015 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site AL539_16015 IPR020103 Pseudouridine synthase, catalytic domain AL539_16020 IPR007384 Protein of unknown function UCP006257 AL539_16020 IPR023376 YqcC-like domain AL539_16020 IPR036814 AL539_16020 AL539_16025 IPR021936 Protein of unknown function DUF3549 AL539_16030 IPR021732 Protein of unknown function DUF3301 AL539_16035 IPR000182 GNAT domain AL539_16035 IPR016181 Acyl-CoA N-acyltransferase AL539_16050 IPR003791 Protein of unknown function UPF0178 AL539_16055 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal AL539_16055 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AL539_16055 IPR016039 Thiolase-like AL539_16060 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain AL539_16060 IPR036291 AL539_16060 AL539_16065 IPR001279 Beta-lactamase-like AL539_16065 IPR036866 AL539_16065 AL539_16070 IPR012685 Conserved hypothetical protein CHP02304, F390 synthetase-related AL539_16075 IPR003806 ATP-grasp fold, DUF201-type AL539_16075 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain AL539_16075 IPR013815 ATP-grasp fold, subdomain 1 AL539_16085 IPR004697 AbgT AL539_16090 IPR000473 Ribosomal protein L36 AL539_16090 IPR035977 AL539_16090 AL539_16095 IPR002150 Ribosomal protein L31 AL539_16095 IPR027493 Ribosomal protein L31 type B AL539_16095 IPR034704 AL539_16095 AL539_16100 IPR023368 Uncharacterised protein family UPF0066, conserved site AL539_16100 IPR023370 TsaA-like domain AL539_16100 IPR036413 AL539_16100 AL539_16100 IPR036414 AL539_16100 AL539_16105 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain AL539_16105 IPR002316 Proline-tRNA ligase, class IIa AL539_16105 IPR004154 Anticodon-binding AL539_16105 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type AL539_16105 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain AL539_16105 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 AL539_16105 IPR036621 AL539_16105 AL539_16105 IPR036754 AL539_16105 AL539_16110 IPR007486 Protein of unknown function DUF533 AL539_16110 IPR029024 TerB-like AL539_16115 IPR009624 Uncharacterised protein family UPF0253 AL539_16120 IPR025346 Protein of unknown function DUF4250 AL539_16125 IPR000175 Sodium:neurotransmitter symporter AL539_16125 IPR037272 AL539_16125 AL539_16130 IPR001223 Glycoside hydrolase, family 18, catalytic domain AL539_16130 IPR001579 Glycoside hydrolase, chitinase active site AL539_16130 IPR003610 Carbohydrate-binding module family 5/12 AL539_16130 IPR011583 Chitinase II AL539_16130 IPR013783 Immunoglobulin-like fold AL539_16130 IPR017853 Glycoside hydrolase, superfamily AL539_16130 IPR036573 AL539_16130 AL539_16135 IPR021307 Protein of unknown function DUF2884 AL539_16140 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal AL539_16140 IPR023459 Transcription elongation factor GreA/GreB family AL539_16140 IPR036953 AL539_16140 AL539_16145 IPR001650 Helicase, C-terminal AL539_16145 IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site AL539_16145 IPR004589 DNA helicase, ATP-dependent, RecQ type AL539_16145 IPR011545 DEAD/DEAH box helicase domain AL539_16145 IPR014001 Helicase, superfamily 1/2, ATP-binding domain AL539_16145 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_16145 IPR032284 AL539_16145 AL539_16145 IPR036388 AL539_16145 AL539_16150 IPR001126 DNA-repair protein, UmuC-like AL539_16150 IPR017961 DNA polymerase, Y-family, little finger domain AL539_16150 IPR022880 DNA polymerase IV AL539_16150 IPR036775 AL539_16150 AL539_16155 IPR021250 Protein of unknown function DUF2789 AL539_16160 IPR000160 GGDEF domain AL539_16160 IPR001789 Signal transduction response regulator, receiver domain AL539_16160 IPR011006 CheY-like superfamily AL539_16160 IPR029787 Nucleotide cyclase AL539_16165 IPR007495 Protein of unknown function DUF539 AL539_16170 IPR003374 ApbE-like domain AL539_16170 IPR024932 Flavin transferase ApbE AL539_16175 IPR001041 2Fe-2S ferredoxin-type domain AL539_16175 IPR001433 Oxidoreductase FAD/NAD(P)-binding AL539_16175 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase AL539_16175 IPR008333 Oxidoreductase, FAD-binding domain AL539_16175 IPR010205 NADH-quinone reductase, Na(+)-translocating, F subunit AL539_16175 IPR012675 Beta-grasp domain AL539_16175 IPR017938 Riboflavin synthase-like beta-barrel AL539_16175 IPR036010 AL539_16175 AL539_16175 IPR039261 AL539_16175 AL539_16180 IPR003667 Electron transport complex, Rnf/Nqr AL539_16180 IPR010967 NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit AL539_16185 IPR003667 Electron transport complex, Rnf/Nqr AL539_16185 IPR011292 NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit AL539_16190 IPR007329 FMN-binding AL539_16190 IPR010204 NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit AL539_16195 IPR004338 NADH-quinone reductase NQR2/RnfD AL539_16195 IPR010966 NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit AL539_16200 IPR008703 NADH-quinone reductase, Na(+)-translocating, subunit A AL539_16200 IPR022615 NADH-quinone reductase, Na(+)-translocating, subunit A, C-terminal AL539_16205 IPR002634 BolA protein AL539_16205 IPR036065 AL539_16205 AL539_16210 IPR007848 Methyltransferase small domain AL539_16210 IPR013675 Methyltransferase small, N-terminal AL539_16210 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD AL539_16210 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like AL539_16215 IPR005619 Uncharacterised protein family, YajG AL539_16220 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain AL539_16220 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site AL539_16220 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase AL539_16220 IPR029000 Cyclophilin-like domain AL539_16225 IPR011701 Major facilitator superfamily AL539_16225 IPR036259 AL539_16225 AL539_16230 IPR011051 RmlC-like cupin domain AL539_16230 IPR012807 Anti-sigma factor ChrR, putative AL539_16230 IPR014710 RmlC-like jelly roll fold AL539_16230 IPR025979 ChrR-like cupin domain AL539_16235 IPR007627 RNA polymerase sigma-70 region 2 AL539_16235 IPR007630 RNA polymerase sigma-70 region 4 AL539_16235 IPR013324 RNA polymerase sigma factor, region 3/4 AL539_16235 IPR013325 RNA polymerase sigma factor, region 2 AL539_16235 IPR014284 RNA polymerase sigma-70 like domain AL539_16235 IPR036388 AL539_16235 AL539_16240 IPR025510 Domain of unknown function DUF4397 AL539_16245 IPR003111 Peptidase S16, lon N-terminal AL539_16245 IPR015947 PUA-like domain AL539_16255 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like AL539_16255 IPR036777 AL539_16255 AL539_16260 IPR003710 Ketopantoate reductase ApbA/PanE AL539_16260 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like AL539_16260 IPR013328 Dehydrogenase, multihelical AL539_16260 IPR013332 Ketopantoate reductase, N-terminal domain AL539_16260 IPR013752 Ketopantoate reductase, C-terminal domain AL539_16260 IPR036291 AL539_16260 AL539_16265 IPR002818 ThiJ/PfpI AL539_16265 IPR006287 DJ-1 AL539_16265 IPR029062 Class I glutamine amidotransferase-like AL539_16270 IPR000192 Aminotransferase class V domain AL539_16270 IPR010970 Cysteine desulfurase, SufS AL539_16270 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 AL539_16270 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 AL539_16270 IPR015424 Pyridoxal phosphate-dependent transferase AL539_16270 IPR016454 Cysteine desulfurase, NifS AL539_16270 IPR020578 Aminotransferase class-V pyridoxal-phosphate binding site AL539_16270 IPR022471 Cysteine desulphurase, catalytic subunit, CsdA AL539_16275 IPR000160 GGDEF domain AL539_16275 IPR029787 Nucleotide cyclase AL539_16280 IPR003808 Fe-S metabolism associated domain, SufE-like AL539_16280 IPR017763 Cysteine desulfurase, sulphur acceptor subunit CsdE AL539_16285 IPR000594 UBA/THIF-type NAD/FAD binding fold AL539_16285 IPR035985 AL539_16285 AL539_16290 IPR005300 Lytic transglycosylase MltA AL539_16290 IPR010611 3D domain AL539_16290 IPR036908 AL539_16290 AL539_16300 IPR021271 Protein of unknown function DUF2850 AL539_16305 IPR000182 GNAT domain AL539_16305 IPR001048 Aspartate/glutamate/uridylate kinase AL539_16305 IPR010167 Amino-acid N-acetyltransferase (ArgA) AL539_16305 IPR016181 Acyl-CoA N-acyltransferase AL539_16305 IPR036393 AL539_16305 AL539_16325 IPR006344 Exodeoxyribonuclease V, alpha subunit AL539_16325 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_16325 IPR027785 UvrD-like helicase C-terminal domain AL539_16330 IPR004586 Exodeoxyribonuclease V, beta subunit AL539_16330 IPR011335 Restriction endonuclease type II-like AL539_16330 IPR011604 Exonuclease, phage-type/RecB, C-terminal AL539_16330 IPR014017 DNA helicase, UvrD-like, C-terminal AL539_16330 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_16330 IPR034739 AL539_16330 AL539_16330 IPR038726 AL539_16330 AL539_16335 IPR006697 Exodeoxyribonuclease V, gamma subunit AL539_16335 IPR011335 Restriction endonuclease type II-like AL539_16335 IPR013986 DExx box DNA helicase domain AL539_16335 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_16340 IPR000917 Sulfatase AL539_16340 IPR012159 Membrane sulfatase, HI0842-related AL539_16340 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha AL539_16340 IPR017850 Alkaline-phosphatase-like, core domain AL539_16340 IPR024588 Membrane sulfatase, HI0842-related, N-terminal domain AL539_16345 IPR004695 Voltage-dependent anion channel AL539_16345 IPR038665 AL539_16345 AL539_16350 IPR000847 Transcription regulator HTH, LysR AL539_16350 IPR005119 LysR, substrate-binding AL539_16350 IPR036388 AL539_16350 AL539_16350 IPR036390 AL539_16350 AL539_16355 IPR009813 Uncharacterised protein family YebG AL539_16355 IPR038627 AL539_16355 AL539_16360 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal AL539_16365 IPR025964 GGGtGRT protein AL539_16370 IPR001451 Bacterial transferase hexapeptide repeat AL539_16370 IPR011004 Trimeric LpxA-like AL539_16370 IPR019876 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, gammaproteobacteria AL539_16370 IPR026586 Type 2 tetrahydrodipicolinate N-succinyltransferase family AL539_16370 IPR032784 AL539_16370 AL539_16370 IPR038361 AL539_16370 AL539_16375 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain AL539_16375 IPR030395 AL539_16375 AL539_16380 IPR000849 Sugar phosphate transporter AL539_16380 IPR005267 Glycerol-3-phosphate transporter AL539_16380 IPR011701 Major facilitator superfamily AL539_16380 IPR021159 Glycerate/sugar phosphate transporter, conserved site AL539_16380 IPR036259 AL539_16380 AL539_16390 IPR000425 Major intrinsic protein AL539_16390 IPR022357 Major intrinsic protein, conserved site AL539_16390 IPR023271 Aquaporin-like AL539_16395 IPR000577 AL539_16395 AL539_16395 IPR005999 Glycerol kinase AL539_16395 IPR018483 Carbohydrate kinase, FGGY, conserved site AL539_16395 IPR018484 Carbohydrate kinase, FGGY, N-terminal AL539_16395 IPR018485 Carbohydrate kinase, FGGY, C-terminal AL539_16400 IPR001034 HTH DeoR N-terminal domain AL539_16400 IPR014036 DeoR C-terminal sensor domain AL539_16400 IPR018356 Transcription regulator, HTH DeoR-type, conserved site AL539_16400 IPR036388 AL539_16400 AL539_16400 IPR036390 AL539_16400 AL539_16400 IPR037171 AL539_16400 AL539_16405 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase AL539_16405 IPR006076 FAD dependent oxidoreductase AL539_16405 IPR031656 AL539_16405 AL539_16405 IPR036188 AL539_16405 AL539_16405 IPR038299 AL539_16405 AL539_16410 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB AL539_16415 IPR010266 NnrS AL539_16420 IPR009288 AIG2-like AL539_16420 IPR036568 AL539_16420 AL539_16425 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel AL539_16425 IPR027385 Outer membrane protein beta-barrel AL539_16430 IPR000843 Transcription regulator HTH, LacI AL539_16430 IPR010982 Lambda repressor-like, DNA-binding domain AL539_16430 IPR028082 Periplasmic binding protein-like I AL539_16435 IPR000847 Transcription regulator HTH, LysR AL539_16435 IPR005119 LysR, substrate-binding AL539_16435 IPR036388 AL539_16435 AL539_16435 IPR036390 AL539_16435 AL539_16440 IPR003370 Chromate transporter AL539_16440 IPR014047 Chromate transporter, long chain AL539_16445 IPR000792 Transcription regulator LuxR, C-terminal AL539_16445 IPR016032 Signal transduction response regulator, C-terminal effector AL539_16445 IPR036388 AL539_16445 AL539_16460 IPR005074 Peptidase C39, bacteriocin processing AL539_16470 IPR025737 MetA-pathway of phenol degradation, putative AL539_16475 IPR000873 AMP-dependent synthetase/ligase AL539_16475 IPR020845 AMP-binding, conserved site AL539_16480 IPR009506 Protein of unknown function DUF1127 AL539_16485 IPR000847 Transcription regulator HTH, LysR AL539_16485 IPR005119 LysR, substrate-binding AL539_16485 IPR036388 AL539_16485 AL539_16485 IPR036390 AL539_16485 AL539_16490 IPR000640 Translation elongation factor EFG, V domain AL539_16490 IPR000795 Elongation factor, GTP-binding domain AL539_16490 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 AL539_16490 IPR004540 Translation elongation factor EFG/EF2 AL539_16490 IPR005225 Small GTP-binding protein domain AL539_16490 IPR005517 Translation elongation factor EFG/EF2, domain IV AL539_16490 IPR009000 Translation protein, beta-barrel domain AL539_16490 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AL539_16490 IPR020568 Ribosomal protein S5 domain 2-type fold AL539_16490 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_16490 IPR031157 AL539_16490 AL539_16490 IPR035647 AL539_16490 AL539_16495 IPR003593 AAA+ ATPase domain AL539_16495 IPR004504 DNA repair protein RadA AL539_16495 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AL539_16495 IPR020568 Ribosomal protein S5 domain 2-type fold AL539_16495 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_16500 IPR009875 PilZ domain AL539_16505 IPR023190 Phosphoserine phosphatase, domain 2 AL539_16505 IPR023214 HAD-like domain AL539_16505 IPR036412 AL539_16505 AL539_16510 IPR019305 Uncharacterised protein family Smp AL539_16515 IPR000845 Nucleoside phosphorylase domain AL539_16515 IPR004402 Purine nucleoside phosphorylase DeoD-type AL539_16515 IPR018016 Nucleoside phosphorylase, conserved site AL539_16515 IPR035994 AL539_16515 AL539_16520 IPR006124 Metalloenzyme AL539_16520 IPR010045 Phosphopentomutase AL539_16520 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha AL539_16520 IPR017850 Alkaline-phosphatase-like, core domain AL539_16520 IPR024052 Phosphopentomutase DeoB cap domain AL539_16525 IPR000053 Pyrimidine-nucleoside phosphorylase AL539_16525 IPR000312 Glycosyl transferase, family 3 AL539_16525 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal AL539_16525 IPR013465 Thymidine phosphorylase AL539_16525 IPR017459 Glycosyl transferase family 3, N-terminal domain AL539_16525 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site AL539_16525 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic AL539_16525 IPR035902 AL539_16525 AL539_16525 IPR036320 AL539_16525 AL539_16525 IPR036566 AL539_16525 AL539_16530 IPR002915 DeoC/FbaB/ lacD aldolase AL539_16530 IPR011343 Deoxyribose-phosphate aldolase AL539_16530 IPR013785 Aldolase-type TIM barrel AL539_16530 IPR023649 Deoxyribose-phosphate aldolase type II AL539_16535 IPR002668 Concentrative nucleoside transporter N-terminal domain AL539_16535 IPR011642 Nucleoside recognition Gate AL539_16535 IPR011657 Concentrative nucleoside transporter C-terminal domain AL539_16535 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial AL539_16540 IPR001130 TatD family AL539_16540 IPR018228 Deoxyribonuclease, TatD-related, conserved site AL539_16540 IPR032466 AL539_16540 AL539_16545 IPR035292 AL539_16545 AL539_16550 IPR000795 Elongation factor, GTP-binding domain AL539_16550 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 AL539_16550 IPR004548 Peptide chain release factor 3 AL539_16550 IPR005225 Small GTP-binding protein domain AL539_16550 IPR009000 Translation protein, beta-barrel domain AL539_16550 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_16550 IPR031157 AL539_16550 AL539_16550 IPR032090 AL539_16550 AL539_16550 IPR035647 AL539_16550 AL539_16550 IPR038467 AL539_16550 AL539_16555 IPR000182 GNAT domain AL539_16555 IPR006464 Ribosomal-protein-alanine acetyltransferase AL539_16555 IPR016181 Acyl-CoA N-acyltransferase AL539_16560 IPR004615 DNA polymerase III, psi subunit AL539_16560 IPR036654 AL539_16560 AL539_16570 IPR016181 Acyl-CoA N-acyltransferase AL539_16575 IPR003033 SCP2 sterol-binding domain AL539_16575 IPR016830 Uncharacterised conserved protein UCP025550, lipid carrier protein, YhbT AL539_16575 IPR036527 AL539_16575 AL539_16585 IPR000014 PAS domain AL539_16585 IPR000160 GGDEF domain AL539_16585 IPR001633 EAL domain AL539_16585 IPR013656 PAS fold-4 AL539_16585 IPR029787 Nucleotide cyclase AL539_16585 IPR035919 AL539_16585 AL539_16585 IPR035965 AL539_16585 AL539_16590 IPR001539 Peptidase U32 AL539_16595 IPR001539 Peptidase U32 AL539_16600 IPR002528 Multi antimicrobial extrusion protein AL539_16605 IPR000835 MarR-type HTH domain AL539_16605 IPR036388 AL539_16605 AL539_16605 IPR036390 AL539_16605 AL539_16610 IPR011990 Tetratricopeptide-like helical domain AL539_16610 IPR019734 Tetratricopeptide repeat AL539_16610 IPR023605 Lipoprotein NlpI AL539_16615 IPR001247 Exoribonuclease, phosphorolytic domain 1 AL539_16615 IPR003029 Ribosomal protein S1, RNA-binding domain AL539_16615 IPR004087 K Homology domain AL539_16615 IPR004088 K Homology domain, type 1 AL539_16615 IPR012162 Polyribonucleotide nucleotidyltransferase AL539_16615 IPR012340 Nucleic acid-binding, OB-fold AL539_16615 IPR015847 Exoribonuclease, phosphorolytic domain 2 AL539_16615 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain AL539_16615 IPR020568 Ribosomal protein S5 domain 2-type fold AL539_16615 IPR022967 RNA-binding domain, S1 AL539_16615 IPR027408 PNPase/RNase PH domain AL539_16615 IPR036345 AL539_16615 AL539_16615 IPR036612 AL539_16615 AL539_16620 IPR000589 Ribosomal protein S15 AL539_16620 IPR005290 Ribosomal protein S15, bacterial-type AL539_16620 IPR009068 S15/NS1, RNA-binding AL539_16625 IPR002501 Pseudouridine synthase II AL539_16625 IPR014780 tRNA pseudouridine synthase II, TruB AL539_16625 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal AL539_16625 IPR015947 PUA-like domain AL539_16625 IPR020103 Pseudouridine synthase, catalytic domain AL539_16625 IPR032819 AL539_16625 AL539_16625 IPR036974 AL539_16625 AL539_16630 IPR000238 Ribosome-binding factor A AL539_16630 IPR015946 K homology domain-like, alpha/beta AL539_16630 IPR020053 Ribosome-binding factor A, conserved site AL539_16630 IPR023799 Ribosome-binding factor A domain AL539_16635 IPR000178 Translation initiation factor aIF-2, bacterial-like AL539_16635 IPR000795 Elongation factor, GTP-binding domain AL539_16635 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 AL539_16635 IPR005225 Small GTP-binding protein domain AL539_16635 IPR006847 Translation initiation factor IF-2, N-terminal AL539_16635 IPR009000 Translation protein, beta-barrel domain AL539_16635 IPR009061 DNA binding domain, putative AL539_16635 IPR013575 Initiation factor 2 associated domain, bacterial AL539_16635 IPR023115 Translation initiation factor IF- 2, domain 3 AL539_16635 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_16635 IPR036925 AL539_16635 AL539_16640 IPR009019 K homology domain, prokaryotic type AL539_16640 IPR010213 Transcription termination factor NusA AL539_16640 IPR010214 Transcription termination factor NusA, C-terminal duplication AL539_16640 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical AL539_16640 IPR012340 Nucleic acid-binding, OB-fold AL539_16640 IPR013735 Transcription factor NusA, N-terminal AL539_16640 IPR015946 K homology domain-like, alpha/beta AL539_16640 IPR022967 RNA-binding domain, S1 AL539_16640 IPR025249 KH domain, NusA-like AL539_16640 IPR030842 AL539_16640 AL539_16640 IPR036555 AL539_16640 AL539_16645 IPR003728 Ribosome maturation factor RimP AL539_16645 IPR028989 Ribosome maturation factor RimP, N-terminal AL539_16645 IPR028998 Ribosome maturation factor RimP, C-terminal AL539_16645 IPR035956 AL539_16645 AL539_16645 IPR036847 AL539_16645 AL539_16660 IPR004692 Preprotein translocase SecG subunit AL539_16670 IPR005841 Alpha-D-phosphohexomutase superfamily AL539_16670 IPR005843 Alpha-D-phosphohexomutase, C-terminal AL539_16670 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I AL539_16670 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II AL539_16670 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III AL539_16670 IPR006352 Phosphoglucosamine mutase AL539_16670 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III AL539_16670 IPR016066 Alpha-D-phosphohexomutase, conserved site AL539_16670 IPR036900 AL539_16670 AL539_16675 IPR000489 Pterin-binding AL539_16675 IPR006390 Dihydropteroate synthase AL539_16675 IPR011005 Dihydropteroate synthase-like AL539_16680 IPR000642 Peptidase M41 AL539_16680 IPR003593 AAA+ ATPase domain AL539_16680 IPR003959 ATPase, AAA-type, core AL539_16680 IPR003960 ATPase, AAA-type, conserved site AL539_16680 IPR005936 Peptidase, FtsH AL539_16680 IPR011546 Peptidase M41, FtsH extracellular AL539_16680 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_16680 IPR037219 AL539_16680 AL539_16685 IPR002877 Ribosomal RNA methyltransferase FtsJ domain AL539_16685 IPR015507 Ribosomal RNA large subunit methyltransferase E AL539_16685 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like AL539_16690 IPR001890 RNA-binding, CRM domain AL539_16690 IPR017924 RNA-binding protein YhbY AL539_16690 IPR035920 AL539_16690 AL539_16695 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal AL539_16695 IPR006359 Transcription elongation factor GreA AL539_16695 IPR018151 Transcription elongation factor, GreA/GreB, conserved site AL539_16695 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal AL539_16695 IPR023459 Transcription elongation factor GreA/GreB family AL539_16695 IPR028624 Transcription elongation factor GreA/GreB AL539_16695 IPR036805 AL539_16695 AL539_16695 IPR036953 AL539_16695 AL539_16700 IPR023614 Porin domain AL539_16705 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C AL539_16705 IPR012338 Beta-lactamase/transpeptidase-like AL539_16710 IPR006667 SLC41 divalent cation transporters, integral membrane domain AL539_16710 IPR036739 AL539_16710 AL539_16710 IPR038048 AL539_16710 AL539_16715 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site AL539_16715 IPR002305 Aminoacyl-tRNA synthetase, class Ic AL539_16715 IPR002307 Tyrosine-tRNA ligase AL539_16715 IPR002942 RNA-binding S4 domain AL539_16715 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL539_16715 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 AL539_16715 IPR036986 AL539_16715 AL539_16720 IPR011055 Duplicated hybrid motif AL539_16720 IPR013731 Opacity-associated protein A, N-terminal AL539_16720 IPR016047 Peptidase M23 AL539_16725 IPR001036 Acriflavin resistance protein AL539_16725 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL539_16730 IPR006143 RND efflux pump, membrane fusion protein AL539_16730 IPR032317 AL539_16730 AL539_16735 IPR000361 FeS cluster biogenesis AL539_16735 IPR016092 FeS cluster insertion protein AL539_16735 IPR017870 FeS cluster insertion, C-terminal, conserved site AL539_16735 IPR023063 Iron-sulfur cluster insertion protein ErpA AL539_16735 IPR035903 AL539_16735 AL539_16740 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase AL539_16740 IPR005814 Aminotransferase class-III AL539_16740 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 AL539_16740 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 AL539_16740 IPR015424 Pyridoxal phosphate-dependent transferase AL539_16745 IPR002549 Uncharacterised protein family UPF0118 AL539_16750 IPR002052 DNA methylase, N-6 adenine-specific, conserved site AL539_16750 IPR007848 Methyltransferase small domain AL539_16750 IPR013675 Methyltransferase small, N-terminal AL539_16750 IPR023543 rRNA small subunit methyltransferase C AL539_16750 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like AL539_16755 IPR000014 PAS domain AL539_16755 IPR001789 Signal transduction response regulator, receiver domain AL539_16755 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_16755 IPR003660 HAMP linker domain AL539_16755 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain AL539_16755 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AL539_16755 IPR011006 CheY-like superfamily AL539_16755 IPR013767 PAS fold AL539_16755 IPR035965 AL539_16755 AL539_16755 IPR036097 AL539_16755 AL539_16755 IPR036890 AL539_16755 AL539_16760 IPR000914 Bacterial extracellular solute-binding protein, family 5 AL539_16760 IPR023765 Bacterial extracellular solute-binding protein, family 5, conserved site AL539_16760 IPR030678 AL539_16760 AL539_16765 IPR000515 MetI-like domain AL539_16765 IPR035906 AL539_16765 AL539_16770 IPR000515 MetI-like domain AL539_16770 IPR035906 AL539_16770 AL539_16775 IPR003439 ABC transporter-like AL539_16775 IPR003593 AAA+ ATPase domain AL539_16775 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal AL539_16775 IPR017871 ABC transporter, conserved site AL539_16775 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_16780 IPR003439 ABC transporter-like AL539_16780 IPR003593 AAA+ ATPase domain AL539_16780 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal AL539_16780 IPR017871 ABC transporter, conserved site AL539_16780 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_16785 IPR001701 Glycoside hydrolase, family 9 AL539_16785 IPR004197 Glycoside hydrolase, family 9, N-terminal, Ig-like AL539_16785 IPR008928 Six-hairpin glycosidase-like AL539_16785 IPR012341 Six-hairpin glycosidase AL539_16785 IPR013783 Immunoglobulin-like fold AL539_16785 IPR014756 Immunoglobulin E-set AL539_16790 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type AL539_16795 IPR015882 Beta-hexosaminidase, bacteial type, N-terminal AL539_16795 IPR015883 Glycoside hydrolase family 20, catalytic core AL539_16795 IPR017853 Glycoside hydrolase, superfamily AL539_16795 IPR025705 Beta-hexosaminidase AL539_16795 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like AL539_16800 IPR008928 Six-hairpin glycosidase-like AL539_16800 IPR009342 Putative carbohydrate binding domain AL539_16800 IPR010383 Glycosyltransferase 36 AL539_16800 IPR011013 Galactose mutarotase-like domain AL539_16800 IPR012341 Six-hairpin glycosidase AL539_16800 IPR033432 AL539_16800 AL539_16800 IPR037018 AL539_16800 AL539_16805 IPR005841 Alpha-D-phosphohexomutase superfamily AL539_16805 IPR005843 Alpha-D-phosphohexomutase, C-terminal AL539_16805 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I AL539_16805 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II AL539_16805 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III AL539_16805 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III AL539_16805 IPR036900 AL539_16805 AL539_16810 IPR003439 ABC transporter-like AL539_16810 IPR003593 AAA+ ATPase domain AL539_16810 IPR008995 Molybdate/tungstate binding, C-terminal AL539_16810 IPR013611 Transport-associated OB, type 2 AL539_16810 IPR017871 ABC transporter, conserved site AL539_16810 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_16815 IPR000515 MetI-like domain AL539_16815 IPR035906 AL539_16815 AL539_16820 IPR026045 Ferric binding protein AL539_16825 IPR018047 Ammonium transporter, conserved site AL539_16825 IPR019879 Ammonium transporter, marine subtype AL539_16825 IPR024041 Ammonium transporter AmtB-like domain AL539_16825 IPR029020 Ammonium/urea transporter AL539_16830 IPR002187 Nitrogen regulatory protein PII AL539_16830 IPR002332 Nitrogen regulatory protein P-II, urydylation site AL539_16830 IPR011322 Nitrogen regulatory PII-like, alpha/beta AL539_16830 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal AL539_16830 IPR017918 Nitrogen regulatory protein PII, conserved site AL539_16835 IPR008249 Uncharacterised protein family UPF0231 AL539_16840 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha AL539_16840 IPR004406 Aconitase B, bacterial AL539_16840 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AL539_16840 IPR015929 Aconitase B, N-terminal, bacterial AL539_16840 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 AL539_16840 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 AL539_16840 IPR015933 Aconitase B, HEAT-like, bacterial AL539_16840 IPR018136 Aconitase family, 4Fe-4S cluster binding site AL539_16840 IPR036008 AL539_16840 AL539_16840 IPR036288 AL539_16840 AL539_16845 IPR002641 Patatin/Phospholipase A2-related AL539_16845 IPR010827 Surface antigen variable number AL539_16845 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AL539_16850 IPR001264 Glycosyl transferase, family 51 AL539_16850 IPR001460 Penicillin-binding protein, transpeptidase AL539_16850 IPR011813 Penicillin-binding protein 1B AL539_16850 IPR012338 Beta-lactamase/transpeptidase-like AL539_16850 IPR023346 Lysozyme-like domain AL539_16850 IPR028166 Bifunctional transglycosylase second domain AL539_16850 IPR036950 AL539_16850 AL539_16855 IPR001650 Helicase, C-terminal AL539_16855 IPR007502 Helicase-associated domain AL539_16855 IPR010225 RNA helicase, ATP-dependent DEAH box, HrpB-type AL539_16855 IPR011545 DEAD/DEAH box helicase domain AL539_16855 IPR013689 RNA helicase, ATP-dependent, HrpB type, C-terminal AL539_16855 IPR014001 Helicase, superfamily 1/2, ATP-binding domain AL539_16855 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_16860 IPR005224 Sugar fermentation stimulation protein AL539_16865 IPR000962 Zinc finger, DksA/TraR C4-type AL539_16865 IPR012784 RNA polymerase-binding transcription factor DksA AL539_16865 IPR020458 Zinc finger, DksA/TraR C4-type conserved site AL539_16865 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria AL539_16865 IPR037187 AL539_16865 AL539_16870 IPR000924 Glutamyl/glutaminyl-tRNA synthetase AL539_16870 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL539_16870 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain AL539_16870 IPR022380 Glutamyl-Q tRNA(Asp) synthetase AL539_16875 IPR002646 Poly A polymerase, head domain AL539_16875 IPR010206 Poly(A) polymerase I AL539_16875 IPR025866 Polymerase A arginine-rich C-terminal domain AL539_16875 IPR032828 AL539_16875 AL539_16880 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK AL539_16880 IPR035907 AL539_16880 AL539_16885 IPR003700 Ketopantoate hydroxymethyltransferase AL539_16885 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain AL539_16890 IPR003721 Pantoate-beta-alanine ligase AL539_16890 IPR004821 Cytidyltransferase-like domain AL539_16890 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL539_16895 IPR004960 Bacterial lipid A biosynthesis acyltransferase AL539_16895 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase AL539_16905 IPR000412 ABC-2 transporter AL539_16905 IPR013525 ABC-2 type transporter AL539_16910 IPR003439 ABC transporter-like AL539_16910 IPR003593 AAA+ ATPase domain AL539_16910 IPR017871 ABC transporter, conserved site AL539_16910 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_16915 IPR002645 STAS domain AL539_16915 IPR011547 Sulphate transporter AL539_16915 IPR036513 AL539_16915 AL539_16920 IPR001765 Carbonic anhydrase AL539_16920 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site AL539_16920 IPR036874 AL539_16920 AL539_16925 IPR000836 Phosphoribosyltransferase domain AL539_16925 IPR005904 Hypoxanthine phosphoribosyl transferase AL539_16925 IPR029057 Phosphoribosyltransferase-like AL539_16930 IPR001647 DNA-binding HTH domain, TetR-type AL539_16930 IPR009057 Homeodomain-like AL539_16930 IPR036271 AL539_16930 AL539_16935 IPR001100 AL539_16935 AL539_16935 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AL539_16935 IPR006258 Dihydrolipoamide dehydrogenase AL539_16935 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site AL539_16935 IPR016156 FAD/NAD-linked reductase, dimerisation domain AL539_16935 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain AL539_16935 IPR036188 AL539_16935 AL539_16940 IPR000089 Biotin/lipoyl attachment AL539_16940 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain AL539_16940 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site AL539_16940 IPR004167 E3 binding AL539_16940 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex AL539_16940 IPR011053 Single hybrid motif AL539_16940 IPR023213 Chloramphenicol acetyltransferase-like domain AL539_16940 IPR036625 AL539_16940 AL539_16945 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type AL539_16945 IPR005474 Transketolase, N-terminal AL539_16945 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II AL539_16945 IPR029061 Thiamin diphosphate-binding fold AL539_16950 IPR000524 Transcription regulator HTH, GntR AL539_16950 IPR008920 Transcription regulator FadR/GntR, C-terminal AL539_16950 IPR011711 GntR, C-terminal AL539_16950 IPR036388 AL539_16950 AL539_16950 IPR036390 AL539_16950 AL539_16955 IPR002502 N-acetylmuramoyl-L-alanine amidase domain AL539_16955 IPR036505 AL539_16955 AL539_16960 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal AL539_16960 IPR004393 Nicotinate-nucleotide pyrophosphorylase AL539_16960 IPR013785 Aldolase-type TIM barrel AL539_16960 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal AL539_16960 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD AL539_16960 IPR036068 AL539_16960 AL539_16960 IPR037128 AL539_16960 AL539_16965 IPR000983 Bacterial general secretion pathway protein G-type pilin AL539_16965 IPR001082 Fimbrial protein pilin AL539_16965 IPR012902 Prokaryotic N-terminal methylation site AL539_16970 IPR001482 Type II secretion system protein E AL539_16970 IPR007831 General secretory system II, protein E, N-terminal AL539_16970 IPR013374 ATPase, type IV, pilus assembly, PilB AL539_16970 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_16970 IPR037257 AL539_16970 AL539_16975 IPR001992 Type II secretion system conserved site AL539_16975 IPR003004 GspF/PilC family AL539_16975 IPR018076 Type II secretion system F domain AL539_16980 IPR000045 Prepilin type IV endopeptidase, peptidase domain AL539_16980 IPR010627 Peptidase A24A, N-terminal AL539_16980 IPR014032 Peptidase A24A, prepilin type IV, bacterial AL539_16985 IPR001977 Dephospho-CoA kinase AL539_16985 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_16990 IPR009777 Cell division protein ZapD AL539_16990 IPR027462 Z ring-associated protein D, C-terminal domain AL539_16990 IPR036268 AL539_16990 AL539_16995 IPR005584 DNA gyrase inhibitor YacG AL539_16995 IPR013088 Zinc finger, NHR/GATA-type AL539_17000 IPR001857 Ribosomal protein L19 AL539_17000 IPR008991 Translation protein SH3-like domain AL539_17000 IPR018257 Ribosomal protein L19, conserved site AL539_17000 IPR038657 AL539_17000 AL539_17005 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria AL539_17005 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain AL539_17005 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal AL539_17005 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AL539_17005 IPR029028 Alpha/beta knot methyltransferases AL539_17010 IPR002676 RimM protein AL539_17010 IPR009000 Translation protein, beta-barrel domain AL539_17010 IPR011033 PRC-barrel-like AL539_17010 IPR011961 16S rRNA processing protein RimM AL539_17010 IPR027275 PRC-barrel domain AL539_17010 IPR036976 AL539_17010 AL539_17015 IPR000307 Ribosomal protein S16 AL539_17015 IPR020592 Ribosomal protein S16, conserved site AL539_17015 IPR023803 Ribosomal protein S16 domain AL539_17020 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain AL539_17020 IPR003593 AAA+ ATPase domain AL539_17020 IPR004125 Signal recognition particle, SRP54 subunit, M-domain AL539_17020 IPR004780 Signal recognition particle protein Ffh AL539_17020 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle AL539_17020 IPR022941 Signal recognition particle, SRP54 subunit AL539_17020 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_17020 IPR036891 AL539_17020 AL539_17025 IPR002541 Cytochrome c assembly protein AL539_17030 IPR000644 CBS domain AL539_17030 IPR002550 Domain of unknown function DUF21 AL539_17030 IPR005170 Transporter-associated domain AL539_17030 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 AL539_17030 IPR036318 AL539_17030 AL539_17035 IPR003815 S-ribosylhomocysteinase (LuxS) AL539_17035 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like AL539_17035 IPR037005 AL539_17035 AL539_17040 IPR023346 Lysozyme-like domain AL539_17045 IPR006334 Glutamate--cysteine ligase, monofunctional AL539_17045 IPR007370 Glutamate--cysteine ligase AL539_17045 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain AL539_17050 IPR007863 Peptidase M16, C-terminal domain AL539_17050 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like AL539_17050 IPR011765 Peptidase M16, N-terminal AL539_17055 IPR020143 Uncharacterised protein family, RP436 AL539_17055 IPR032816 AL539_17055 AL539_17060 IPR011032 GroES (chaperonin 10)-like AL539_17060 IPR013154 Alcohol dehydrogenase GroES-like AL539_17060 IPR020843 Polyketide synthase, enoylreductase AL539_17060 IPR036291 AL539_17060 AL539_17065 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit AL539_17070 IPR000089 Biotin/lipoyl attachment AL539_17070 IPR000891 Pyruvate carboxyltransferase AL539_17070 IPR001882 Biotin-binding site AL539_17070 IPR003379 Carboxylase, conserved domain AL539_17070 IPR005776 Oxaloacetate decarboxylase, alpha subunit AL539_17070 IPR011053 Single hybrid motif AL539_17070 IPR013785 Aldolase-type TIM barrel AL539_17075 IPR005899 Sodium ion-translocating decarboxylase AL539_17075 IPR023424 Oxaloacetate decarboxylase gamma chain, probable AL539_17130 IPR003751 Carbon storage regulator AL539_17130 IPR036107 AL539_17130 AL539_17135 IPR001048 Aspartate/glutamate/uridylate kinase AL539_17135 IPR001341 Aspartate kinase domain AL539_17135 IPR005260 Aspartate kinase, monofunctional class AL539_17135 IPR018042 Aspartate kinase, conserved site AL539_17135 IPR036393 AL539_17135 AL539_17140 IPR002318 Alanine-tRNA ligase, class IIc AL539_17140 IPR003156 DHHA1 domain AL539_17140 IPR009000 Translation protein, beta-barrel domain AL539_17140 IPR012947 Threonyl/alanyl tRNA synthetase, SAD AL539_17140 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain AL539_17140 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain AL539_17140 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal AL539_17140 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria AL539_17145 IPR003783 Regulatory protein RecX AL539_17145 IPR036388 AL539_17145 AL539_17150 IPR003593 AAA+ ATPase domain AL539_17150 IPR013765 DNA recombination and repair protein RecA AL539_17150 IPR020584 DNA recombination/repair protein RecA, conserved site AL539_17150 IPR023400 DNA recombination and repair protein RecA, C-terminal AL539_17150 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_17155 IPR008136 CinA, C-terminal AL539_17155 IPR036653 AL539_17155 AL539_17160 IPR000432 DNA mismatch repair protein MutS, C-terminal AL539_17160 IPR005748 DNA mismatch repair protein MutS, type 1 AL539_17160 IPR007695 DNA mismatch repair protein MutS-like, N-terminal AL539_17160 IPR007696 DNA mismatch repair protein MutS, core AL539_17160 IPR007860 DNA mismatch repair protein MutS, connector domain AL539_17160 IPR007861 DNA mismatch repair protein MutS, clamp AL539_17160 IPR016151 DNA mismatch repair protein MutS, N-terminal AL539_17160 IPR017261 DNA mismatch repair protein Msh6 AL539_17160 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_17160 IPR036187 AL539_17160 AL539_17160 IPR036678 AL539_17160 AL539_17165 IPR000943 RNA polymerase sigma-70 AL539_17165 IPR007624 RNA polymerase sigma-70 region 3 AL539_17165 IPR007627 RNA polymerase sigma-70 region 2 AL539_17165 IPR007630 RNA polymerase sigma-70 region 4 AL539_17165 IPR009042 RNA polymerase sigma-70 region 1.2 AL539_17165 IPR012761 RNA polymerase sigma factor RpoS AL539_17165 IPR013324 RNA polymerase sigma factor, region 3/4 AL539_17165 IPR013325 RNA polymerase sigma factor, region 2 AL539_17165 IPR014284 RNA polymerase sigma-70 like domain AL539_17165 IPR036388 AL539_17165 AL539_17170 IPR011055 Duplicated hybrid motif AL539_17170 IPR016047 Peptidase M23 AL539_17170 IPR018392 LysM domain AL539_17170 IPR036779 AL539_17170 AL539_17175 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase AL539_17175 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like AL539_17180 IPR002828 Survival protein SurE-like phosphatase/nucleotidase AL539_17180 IPR030048 AL539_17180 AL539_17180 IPR036523 AL539_17180 AL539_17185 IPR001656 Pseudouridine synthase, TruD AL539_17185 IPR020103 Pseudouridine synthase, catalytic domain AL539_17185 IPR020119 Pseudouridine synthase TruD, conserved site AL539_17190 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase AL539_17190 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site AL539_17190 IPR036571 AL539_17190 AL539_17195 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AL539_17195 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site AL539_17195 IPR029044 Nucleotide-diphospho-sugar transferases AL539_17195 IPR034683 AL539_17195 AL539_17200 IPR007060 Septum formation initiator FtsL/DivIC AL539_17200 IPR023081 Cell division protein FtsB AL539_17205 IPR000941 Enolase AL539_17205 IPR020809 Enolase, conserved site AL539_17205 IPR020810 Enolase, C-terminal AL539_17205 IPR020811 Enolase, N-terminal AL539_17205 IPR029017 Enolase N-terminal domain-like AL539_17205 IPR036849 AL539_17205 AL539_17210 IPR004468 CTP synthase AL539_17210 IPR017456 CTP synthase, N-terminal AL539_17210 IPR017926 Glutamine amidotransferase AL539_17210 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_17210 IPR029062 Class I glutamine amidotransferase-like AL539_17215 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core AL539_17215 IPR011551 NTP pyrophosphohydrolase MazG, bacterial AL539_17220 IPR002912 ACT domain AL539_17220 IPR003607 HD/PDEase domain AL539_17220 IPR004095 TGS AL539_17220 IPR004811 RelA/SpoT family AL539_17220 IPR007685 RelA/SpoT AL539_17220 IPR012675 Beta-grasp domain AL539_17220 IPR012676 TGS-like AL539_17230 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD AL539_17230 IPR002792 TRAM domain AL539_17230 IPR010280 (Uracil-5)-methyltransferase family AL539_17230 IPR012340 Nucleic acid-binding, OB-fold AL539_17230 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like AL539_17230 IPR030390 AL539_17230 AL539_17230 IPR030391 AL539_17230 AL539_17240 IPR001789 Signal transduction response regulator, receiver domain AL539_17240 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_17240 IPR003660 HAMP linker domain AL539_17240 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain AL539_17240 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AL539_17240 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain AL539_17240 IPR011006 CheY-like superfamily AL539_17240 IPR019247 Histidine kinase BarA, N-terminal AL539_17240 IPR036097 AL539_17240 AL539_17240 IPR036641 AL539_17240 AL539_17240 IPR036890 AL539_17240 AL539_17245 IPR002582 Holo-[acyl carrier protein] synthase AL539_17245 IPR004568 Phosphopantethiene-protein transferase domain AL539_17245 IPR008278 4'-phosphopantetheinyl transferase superfamily AL539_17245 IPR037143 AL539_17245 AL539_17250 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ AL539_17250 IPR013785 Aldolase-type TIM barrel AL539_17250 IPR036130 AL539_17250 AL539_17255 IPR003717 Recombination protein O, RecO AL539_17255 IPR012340 Nucleic acid-binding, OB-fold AL539_17255 IPR022572 DNA replication/recombination mediator RecO, N-terminal AL539_17255 IPR037278 AL539_17255 AL539_17260 IPR004044 K Homology domain, type 2 AL539_17260 IPR005225 Small GTP-binding protein domain AL539_17260 IPR005662 GTP-binding protein Era AL539_17260 IPR006073 GTP binding domain AL539_17260 IPR009019 K homology domain, prokaryotic type AL539_17260 IPR015946 K homology domain-like, alpha/beta AL539_17260 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_17265 IPR000999 Ribonuclease III domain AL539_17265 IPR011907 Ribonuclease III AL539_17265 IPR014720 Double-stranded RNA-binding domain AL539_17265 IPR036389 AL539_17265 AL539_17270 IPR000223 Peptidase S26A, signal peptidase I AL539_17270 IPR015927 Peptidase S24/S26A/S26B/S26C AL539_17270 IPR019533 Peptidase S26 AL539_17270 IPR019756 Peptidase S26A, signal peptidase I, serine active site AL539_17270 IPR019757 Peptidase S26A, signal peptidase I, lysine active site AL539_17270 IPR019758 Peptidase S26A, signal peptidase I, conserved site AL539_17270 IPR036286 AL539_17270 AL539_17275 IPR000640 Translation elongation factor EFG, V domain AL539_17275 IPR000795 Elongation factor, GTP-binding domain AL539_17275 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 AL539_17275 IPR005225 Small GTP-binding protein domain AL539_17275 IPR006297 Elongation factor 4 AL539_17275 IPR009000 Translation protein, beta-barrel domain AL539_17275 IPR013842 GTP-binding protein LepA, C-terminal AL539_17275 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_17275 IPR031157 AL539_17275 AL539_17275 IPR035647 AL539_17275 AL539_17275 IPR038363 AL539_17275 AL539_17280 IPR026268 Protein RseC AL539_17285 IPR005588 MucB/RseB AL539_17285 IPR033434 AL539_17285 AL539_17285 IPR033436 AL539_17285 AL539_17285 IPR038484 AL539_17285 AL539_17290 IPR005572 Anti sigma-E protein RseA, N-terminal AL539_17290 IPR005573 Anti sigma-E protein RseA, C-terminal AL539_17290 IPR026279 Sigma-E factor negative regulatory protein RseA AL539_17290 IPR036147 AL539_17290 AL539_17295 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site AL539_17295 IPR007627 RNA polymerase sigma-70 region 2 AL539_17295 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 AL539_17295 IPR013324 RNA polymerase sigma factor, region 3/4 AL539_17295 IPR013325 RNA polymerase sigma factor, region 2 AL539_17295 IPR014284 RNA polymerase sigma-70 like domain AL539_17295 IPR014286 RNA polymerase sigma-70 RpoE type AL539_17295 IPR036388 AL539_17295 AL539_17305 IPR003953 FAD binding domain AL539_17305 IPR005288 L-aspartate oxidase AL539_17305 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal AL539_17305 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain AL539_17305 IPR036188 AL539_17305 AL539_17305 IPR037099 AL539_17305 AL539_17315 IPR005631 Flavinator of succinate dehydrogenase AL539_17315 IPR036714 AL539_17315 AL539_17320 IPR006222 Glycine cleavage T-protein, N-terminal AL539_17320 IPR017703 YgfZ/GcvT conserved site AL539_17320 IPR023758 tRNA-modifying protein YgfZ AL539_17320 IPR028896 Aminomethyltransferase/Dimethylsulfonioproprionate demethylase DmdA AL539_17320 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain AL539_17325 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain AL539_17325 IPR036754 AL539_17325 AL539_17330 IPR009491 Protein of unknown function DUF1107 AL539_17335 IPR002938 Monooxygenase, FAD-binding AL539_17335 IPR010971 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/UbiI/COQ6 AL539_17335 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site AL539_17335 IPR036188 AL539_17335 AL539_17340 IPR002938 Monooxygenase, FAD-binding AL539_17340 IPR010971 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/UbiI/COQ6 AL539_17340 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase AL539_17340 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site AL539_17340 IPR036188 AL539_17340 AL539_17345 IPR011978 Uncharacterised protein family UPF0149 AL539_17345 IPR036255 AL539_17345 AL539_17355 IPR007838 Cell division protein ZapA-like AL539_17355 IPR036192 AL539_17355 AL539_17365 IPR002698 5-formyltetrahydrofolate cyclo-ligase AL539_17365 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain AL539_17365 IPR037171 AL539_17365 AL539_17370 IPR004788 Ribose 5-phosphate isomerase, type A AL539_17370 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup AL539_17370 IPR037171 AL539_17370 AL539_17375 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AL539_17375 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain AL539_17375 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 AL539_17375 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AL539_17375 IPR036291 AL539_17375 AL539_17380 IPR007497 Protein of unknown function DUF541 AL539_17385 IPR000847 Transcription regulator HTH, LysR AL539_17385 IPR005119 LysR, substrate-binding AL539_17385 IPR017685 Transcription regulator ArgP AL539_17385 IPR023490 Chromosome initiation inhibitor AL539_17385 IPR036388 AL539_17385 AL539_17385 IPR036390 AL539_17385 AL539_17390 IPR001123 Lysine-type exporter protein (LYSE/YGGA) AL539_17395 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain AL539_17395 IPR036754 AL539_17395 AL539_17400 IPR006685 Mechanosensitive ion channel MscS AL539_17400 IPR006686 Mechanosensitive ion channel MscS, conserved site AL539_17400 IPR008910 Conserved TM helix AL539_17400 IPR010920 Like-Sm (LSM) domain AL539_17400 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 AL539_17400 IPR011066 Mechanosensitive ion channel MscS, C-terminal AL539_17400 IPR023408 AL539_17400 AL539_17405 IPR000771 Ketose-bisphosphate aldolase, class-II AL539_17405 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype AL539_17405 IPR013785 Aldolase-type TIM barrel AL539_17410 IPR001576 Phosphoglycerate kinase AL539_17410 IPR015824 Phosphoglycerate kinase, N-terminal AL539_17410 IPR015911 Phosphoglycerate kinase, conserved site AL539_17410 IPR036043 AL539_17410 AL539_17415 IPR006422 D-erythrose-4-phosphate dehydrogenase AL539_17415 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain AL539_17415 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain AL539_17415 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family AL539_17415 IPR036291 AL539_17415 AL539_17420 IPR000531 TonB-dependent receptor, beta-barrel AL539_17420 IPR010916 TonB box, conserved site AL539_17420 IPR010917 TonB-dependent receptor, conserved site AL539_17420 IPR012910 TonB-dependent receptor, plug AL539_17420 IPR036942 AL539_17420 AL539_17420 IPR037066 AL539_17420 AL539_17425 IPR000847 Transcription regulator HTH, LysR AL539_17425 IPR005119 LysR, substrate-binding AL539_17425 IPR036388 AL539_17425 AL539_17425 IPR036390 AL539_17425 AL539_17430 IPR005474 Transketolase, N-terminal AL539_17430 IPR005475 Transketolase-like, pyrimidine-binding domain AL539_17430 IPR005478 Transketolase, bacterial-like AL539_17430 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II AL539_17430 IPR020826 Transketolase binding site AL539_17430 IPR029061 Thiamin diphosphate-binding fold AL539_17430 IPR033248 AL539_17430 AL539_17440 IPR002133 S-adenosylmethionine synthetase AL539_17440 IPR022628 S-adenosylmethionine synthetase, N-terminal AL539_17440 IPR022629 S-adenosylmethionine synthetase, central domain AL539_17440 IPR022630 S-adenosylmethionine synthetase, C-terminal AL539_17440 IPR022631 S-adenosylmethionine synthetase, conserved site AL539_17440 IPR022636 S-adenosylmethionine synthetase superfamily AL539_17445 IPR018692 Protein of unknown function DUF2189 AL539_17450 IPR006640 Domain of unknown function SprT-like AL539_17450 IPR023483 Uncharacterised protein family SprT AL539_17450 IPR035240 AL539_17450 AL539_17455 IPR007346 Endonuclease I AL539_17460 IPR006700 Ribosomal RNA small subunit methyltransferase E AL539_17460 IPR015947 PUA-like domain AL539_17460 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AL539_17460 IPR029028 Alpha/beta knot methyltransferases AL539_17465 IPR004215 Prokaryotic glutathione synthetase, N-terminal AL539_17465 IPR004218 Prokaryotic glutathione synthetase, ATP-binding AL539_17465 IPR006284 Glutathione synthetase, prokaryotic AL539_17465 IPR013815 ATP-grasp fold, subdomain 1 AL539_17465 IPR016185 Pre-ATP-grasp domain AL539_17470 IPR003774 Protein of unknown function UPF0301 AL539_17475 IPR005227 Resolvase, holliday junction-type, YqgF-like AL539_17475 IPR006641 YqgF/RNase H-like domain AL539_17475 IPR012337 Ribonuclease H-like domain AL539_17475 IPR037027 AL539_17475 AL539_17480 IPR001482 Type II secretion system protein E AL539_17480 IPR006321 Pilus retraction protein PilT AL539_17480 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_17485 IPR001482 Type II secretion system protein E AL539_17485 IPR003593 AAA+ ATPase domain AL539_17485 IPR006321 Pilus retraction protein PilT AL539_17485 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_17490 IPR001608 Alanine racemase, N-terminal AL539_17490 IPR011078 Uncharacterised protein family UPF0001 AL539_17490 IPR029066 PLP-binding barrel AL539_17495 IPR000304 Pyrroline-5-carboxylate reductase AL539_17495 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like AL539_17495 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal AL539_17495 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain AL539_17495 IPR036291 AL539_17495 AL539_17500 IPR003425 Uncharacterised protein family Ycf19 AL539_17505 IPR003746 Protein of unknown function DUF167 AL539_17505 IPR005228 Conserved hypothetical protein CHP00251 AL539_17505 IPR036591 AL539_17505 AL539_17510 IPR025218 Domain of unknown function DUF4426 AL539_17515 IPR002637 Ham1-like protein AL539_17515 IPR020922 Non-canonical purine NTP pyrophosphatase AL539_17515 IPR029001 Inosine triphosphate pyrophosphatase-like AL539_17520 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related AL539_17520 IPR006638 Elongator protein 3/MiaB/NifB AL539_17520 IPR007197 Radical SAM AL539_17520 IPR010723 HemN, C-terminal domain AL539_17520 IPR023404 Radical SAM, alpha/beta horseshoe AL539_17525 IPR012338 Beta-lactamase/transpeptidase-like AL539_17525 IPR015868 Glutaminase AL539_17530 IPR000241 Putative RNA methylase domain AL539_17530 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like AL539_17535 IPR003358 tRNA (guanine-N-7) methyltransferase AL539_17535 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like AL539_17540 IPR000445 Helix-hairpin-helix motif AL539_17540 IPR003265 HhH-GPD domain AL539_17540 IPR005760 A/G-specific adenine glycosylase MutY AL539_17540 IPR011257 DNA glycosylase AL539_17540 IPR015797 NUDIX hydrolase domain-like AL539_17540 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal AL539_17540 IPR029119 MutY, C-terminal AL539_17550 IPR019238 Protein of unknown function DUF2186 AL539_17560 IPR001279 Beta-lactamase-like AL539_17560 IPR029228 Alkyl sulfatase dimerisation domain AL539_17560 IPR029229 Alkyl sulfatase, C-terminal AL539_17560 IPR036527 AL539_17560 AL539_17560 IPR036866 AL539_17560 AL539_17560 IPR038536 AL539_17560 AL539_17570 IPR020556 Amidase, conserved site AL539_17570 IPR023631 Amidase signature domain AL539_17570 IPR036928 AL539_17570 AL539_17575 IPR001646 Pentapeptide repeat AL539_17580 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_17585 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_17615 IPR021681 Protein of unknown function DUF3265 AL539_17625 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AL539_17625 IPR018146 Glyoxalase I, conserved site AL539_17625 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL539_17630 IPR021681 Protein of unknown function DUF3265 AL539_17640 IPR000182 GNAT domain AL539_17640 IPR016181 Acyl-CoA N-acyltransferase AL539_17655 IPR011202 Bacteriophage BK5-T, Orf30 AL539_17655 IPR039444 AL539_17655 AL539_17665 IPR002104 Integrase, catalytic AL539_17665 IPR011010 DNA breaking-rejoining enzyme, catalytic core AL539_17675 IPR002104 Integrase, catalytic AL539_17675 IPR010998 Integrase, Lambda-type, N-terminal AL539_17675 IPR011010 DNA breaking-rejoining enzyme, catalytic core AL539_17675 IPR013762 Integrase-like, catalytic core AL539_17685 IPR003959 ATPase, AAA-type, core AL539_17685 IPR014592 Predicted P-loop ATP-binding protein, VCA0200 AL539_17685 IPR022532 Domain of unknown function DUF3696, C-terminal AL539_17685 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_17690 IPR004919 Domain of unknown function DUF262 AL539_17695 IPR000445 Helix-hairpin-helix motif AL539_17695 IPR003265 HhH-GPD domain AL539_17695 IPR005760 A/G-specific adenine glycosylase MutY AL539_17695 IPR011257 DNA glycosylase AL539_17695 IPR015797 NUDIX hydrolase domain-like AL539_17695 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal AL539_17695 IPR029119 MutY, C-terminal AL539_17705 IPR019238 Protein of unknown function DUF2186 AL539_17715 IPR001279 Beta-lactamase-like AL539_17715 IPR029228 Alkyl sulfatase dimerisation domain AL539_17715 IPR029229 Alkyl sulfatase, C-terminal AL539_17715 IPR036527 AL539_17715 AL539_17715 IPR036866 AL539_17715 AL539_17715 IPR038536 AL539_17715 AL539_17725 IPR020556 Amidase, conserved site AL539_17725 IPR023631 Amidase signature domain AL539_17725 IPR036928 AL539_17725 AL539_17730 IPR001646 Pentapeptide repeat AL539_17760 IPR021681 Protein of unknown function DUF3265 AL539_17775 IPR021681 Protein of unknown function DUF3265 AL539_17780 IPR000182 GNAT domain AL539_17780 IPR016181 Acyl-CoA N-acyltransferase AL539_17800 IPR011202 Bacteriophage BK5-T, Orf30 AL539_17800 IPR039444 AL539_17800 AL539_17810 IPR002104 Integrase, catalytic AL539_17810 IPR011010 DNA breaking-rejoining enzyme, catalytic core AL539_17820 IPR002104 Integrase, catalytic AL539_17820 IPR010998 Integrase, Lambda-type, N-terminal AL539_17820 IPR011010 DNA breaking-rejoining enzyme, catalytic core AL539_17820 IPR013762 Integrase-like, catalytic core AL539_17830 IPR003959 ATPase, AAA-type, core AL539_17830 IPR014592 Predicted P-loop ATP-binding protein, VCA0200 AL539_17830 IPR022532 Domain of unknown function DUF3696, C-terminal AL539_17830 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_17835 IPR004919 Domain of unknown function DUF262 AL539_17845 IPR007457 Fe(II) trafficking protein YggX AL539_17845 IPR036766 AL539_17845 AL539_17850 IPR000189 Prokaryotic transglycosylase, active site AL539_17850 IPR008258 Lytic transglycosylase-like SLT domain AL539_17850 IPR023346 Lysozyme-like domain AL539_17850 IPR024570 Murein transglycosylase-C, N-terminal AL539_17890 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AL539_17890 IPR004090 Chemotaxis methyl-accepting receptor AL539_17890 IPR033480 AL539_17890 AL539_17925 IPR015590 Aldehyde dehydrogenase domain AL539_17925 IPR016160 Aldehyde dehydrogenase, cysteine active site AL539_17925 IPR016161 Aldehyde/histidinol dehydrogenase AL539_17925 IPR016162 Aldehyde dehydrogenase, N-terminal AL539_17925 IPR016163 Aldehyde dehydrogenase, C-terminal AL539_17925 IPR029510 Aldehyde dehydrogenase, glutamic acid active site AL539_17970 IPR003607 HD/PDEase domain AL539_17970 IPR006674 HD domain AL539_17970 IPR021812 Protein of unknown function DUF3391 AL539_17975 IPR000843 Transcription regulator HTH, LacI AL539_17975 IPR010982 Lambda repressor-like, DNA-binding domain AL539_17975 IPR028082 Periplasmic binding protein-like I AL539_17980 IPR006879 Uncharacterised protein family UPF0249/HpnK AL539_17980 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel AL539_17980 IPR022948 Uncharacterised protein family UPF0249 AL539_17985 IPR001088 Glycoside hydrolase, family 4 AL539_17985 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal AL539_17985 IPR022616 Glycosyl hydrolase, family 4, C-terminal AL539_17985 IPR036291 AL539_17985 AL539_17990 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit AL539_17990 IPR036542 AL539_17990 AL539_17995 IPR003352 Phosphotransferase system, EIIC AL539_17995 IPR004501 Phosphotransferase system, EIIC component, type 3 AL539_17995 IPR004796 Phosphotransferase system, cellobiose-type IIC component AL539_18000 IPR003501 Phosphotransferase system, EIIB component, type 2/3 AL539_18000 IPR036095 AL539_18000 AL539_18005 IPR002509 Polysaccharide deacetylase AL539_18005 IPR003610 Carbohydrate-binding module family 5/12 AL539_18005 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel AL539_18005 IPR036573 AL539_18005 AL539_18015 IPR002347 Glucose/ribitol dehydrogenase AL539_18015 IPR036291 AL539_18015 AL539_18020 IPR018723 Protein of unknown function DUF2254, membrane AL539_18025 IPR010432 RDD AL539_18030 IPR005495 Permease YjgP/YjgQ, predicted AL539_18030 IPR030923 AL539_18030 AL539_18035 IPR005495 Permease YjgP/YjgQ, predicted AL539_18035 IPR030922 AL539_18035 AL539_18040 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal AL539_18040 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal AL539_18040 IPR011356 Leucine aminopeptidase/peptidase B AL539_18040 IPR023042 Peptidase M17, leucine aminopeptidase AL539_18045 IPR007459 DNA polymerase III chi subunit, HolC AL539_18045 IPR036768 AL539_18045 AL539_18050 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site AL539_18050 IPR002300 Aminoacyl-tRNA synthetase, class Ia AL539_18050 IPR002303 Valine-tRNA ligase AL539_18050 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain AL539_18050 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding AL539_18050 IPR010978 tRNA-binding arm AL539_18050 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding AL539_18050 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL539_18050 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm AL539_18050 IPR037118 AL539_18050 AL539_18055 IPR018638 Domain of unknown function DUF2061, membrane AL539_18060 IPR000182 GNAT domain AL539_18060 IPR000835 MarR-type HTH domain AL539_18060 IPR016181 Acyl-CoA N-acyltransferase AL539_18060 IPR023187 Transcriptional regulator MarR-type, conserved site AL539_18060 IPR036388 AL539_18060 AL539_18060 IPR036390 AL539_18060 AL539_18065 IPR008979 Galactose-binding domain-like AL539_18070 IPR009671 Regulator of ribonuclease activity B domain AL539_18070 IPR016716 Regulator of ribonuclease activity B AL539_18070 IPR036701 AL539_18070 AL539_18075 IPR003876 Arginine deiminase AL539_18080 IPR002292 Ornithine/putrescine carbamoyltransferase AL539_18080 IPR006130 Aspartate/ornithine carbamoyltransferase AL539_18080 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain AL539_18080 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding AL539_18080 IPR024904 Ornithine carbamoyltransferase AL539_18080 IPR036901 AL539_18080 AL539_18090 IPR002082 Aspartate carbamoyltransferase AL539_18090 IPR006130 Aspartate/ornithine carbamoyltransferase AL539_18090 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain AL539_18090 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding AL539_18090 IPR036901 AL539_18090 AL539_18095 IPR002801 Aspartate transcarbamylase regulatory subunit AL539_18095 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal AL539_18095 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal AL539_18095 IPR036792 AL539_18095 AL539_18095 IPR036793 AL539_18095 AL539_18100 IPR006056 Enamine/imine deaminase YjgF-like AL539_18100 IPR006175 YjgF/Yer057p/UK114 family AL539_18100 IPR019897 YjgF-like protein, conserved site AL539_18100 IPR035959 AL539_18100 AL539_18105 IPR002123 Phospholipid/glycerol acyltransferase AL539_18105 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase AL539_18110 IPR001986 Enolpyruvate transferase domain AL539_18110 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase AL539_18110 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta AL539_18110 IPR036968 AL539_18110 AL539_18115 IPR002634 BolA protein AL539_18115 IPR036065 AL539_18115 AL539_18120 IPR002645 STAS domain AL539_18120 IPR036513 AL539_18120 AL539_18125 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC AL539_18130 IPR003399 Mammalian cell entry-related AL539_18130 IPR030970 AL539_18130 AL539_18135 IPR003453 Permease domain AL539_18135 IPR030802 AL539_18135 AL539_18140 IPR003439 ABC transporter-like AL539_18140 IPR003593 AAA+ ATPase domain AL539_18140 IPR017871 ABC transporter, conserved site AL539_18140 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_18145 IPR004481 Sodium/potassium/calcium exchanger AL539_18145 IPR004837 Sodium/calcium exchanger membrane region AL539_18150 IPR000644 CBS domain AL539_18150 IPR001347 Sugar isomerase (SIS) AL539_18150 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type AL539_18155 IPR010664 Lipopolysaccharide assembly, LptC-related AL539_18155 IPR026265 Lipopolysaccharide export system protein LptC AL539_18160 IPR005653 Organic solvent tolerance-like, N-terminal AL539_18160 IPR014340 Lipopolysaccharide assembly, LptA AL539_18165 IPR003439 ABC transporter-like AL539_18165 IPR003593 AAA+ ATPase domain AL539_18165 IPR017871 ABC transporter, conserved site AL539_18165 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_18165 IPR030921 AL539_18165 AL539_18165 IPR032823 AL539_18165 AL539_18170 IPR000394 RNA polymerase sigma factor 54 AL539_18170 IPR007046 RNA polymerase sigma factor 54, core-binding AL539_18170 IPR007634 RNA polymerase sigma factor 54, DNA-binding AL539_18170 IPR038709 AL539_18170 AL539_18175 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein AL539_18175 IPR036567 AL539_18175 AL539_18180 IPR002178 PTS EIIA type-2 domain AL539_18180 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN AL539_18180 IPR016152 Phosphotransferase/anion transporter AL539_18185 IPR005337 ATPase, P-loop-containing AL539_18185 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_18190 IPR000032 Phosphocarrier HPr protein-like AL539_18190 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site AL539_18190 IPR002114 Phosphotransferase system, HPr serine phosphorylation site AL539_18190 IPR035895 AL539_18190 AL539_18195 IPR000644 CBS domain AL539_18195 IPR006667 SLC41 divalent cation transporters, integral membrane domain AL539_18195 IPR006668 Magnesium transporter, MgtE intracellular domain AL539_18195 IPR006669 Magnesium transporter MgtE AL539_18195 IPR036739 AL539_18195 AL539_18195 IPR038048 AL539_18195 AL539_18195 IPR038076 AL539_18195 AL539_18200 IPR002510 TldD/PmbA AL539_18200 IPR035068 AL539_18200 AL539_18200 IPR036059 AL539_18200 AL539_18205 IPR006839 Ribosome-associated, YjgA AL539_18205 IPR023153 PSPTO4464-like domain AL539_18210 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AL539_18210 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain AL539_18210 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AL539_18210 IPR036291 AL539_18210 AL539_18215 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F AL539_18215 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site AL539_18215 IPR020103 Pseudouridine synthase, catalytic domain AL539_18225 IPR000330 SNF2-related AL539_18225 IPR001650 Helicase, C-terminal AL539_18225 IPR014001 Helicase, superfamily 1/2, ATP-binding domain AL539_18225 IPR022737 RNA polymerase recycling, bacterial, C-terminal AL539_18225 IPR023949 RNA polymerase-associated protein RapA AL539_18225 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_18225 IPR038718 AL539_18225 AL539_18230 IPR002716 PIN domain AL539_18230 IPR003714 PhoH-like protein AL539_18230 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_18230 IPR029060 PIN domain-like AL539_18235 IPR002510 TldD/PmbA AL539_18235 IPR025502 TldD AL539_18235 IPR035068 AL539_18235 AL539_18235 IPR036059 AL539_18235 AL539_18240 IPR001110 Uncharacterised protein family UPF0012, conserved site AL539_18240 IPR003010 Carbon-nitrogen hydrolase AL539_18240 IPR036526 AL539_18240 AL539_18245 IPR011836 Conserved hypothetical protein CHP02099 AL539_18245 IPR025263 Domain of unknown function DUF3971 AL539_18245 IPR032712 AL539_18245 AL539_18250 IPR003029 Ribosomal protein S1, RNA-binding domain AL539_18250 IPR004659 Ribonuclease E/G AL539_18250 IPR012340 Nucleic acid-binding, OB-fold AL539_18250 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G AL539_18250 IPR022967 RNA-binding domain, S1 AL539_18255 IPR003697 Maf-like protein AL539_18255 IPR029001 Inosine triphosphate pyrophosphatase-like AL539_18260 IPR007227 Cell shape-determining protein MreD AL539_18260 IPR026034 Cell shape-determining protein MreD, proteobacterial type AL539_18265 IPR007221 Rod shape-determining protein MreC AL539_18270 IPR004753 Cell shape determining protein MreB/Mrl AL539_18280 IPR025668 Transposase DDE domain AL539_18290 IPR000160 GGDEF domain AL539_18290 IPR001633 EAL domain AL539_18290 IPR029787 Nucleotide cyclase AL539_18290 IPR033423 AL539_18290 AL539_18290 IPR035919 AL539_18290 AL539_18295 IPR000424 Primosome PriB/single-strand DNA-binding AL539_18295 IPR011344 Single-stranded DNA-binding protein AL539_18295 IPR012340 Nucleic acid-binding, OB-fold AL539_18300 IPR000792 Transcription regulator LuxR, C-terminal AL539_18300 IPR016032 Signal transduction response regulator, C-terminal effector AL539_18300 IPR036388 AL539_18300 AL539_18305 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type AL539_18305 IPR005835 Nucleotidyl transferase AL539_18305 IPR029044 Nucleotide-diphospho-sugar transferases AL539_18310 IPR003439 ABC transporter-like AL539_18310 IPR004602 UvrABC system subunit A AL539_18310 IPR017871 ABC transporter, conserved site AL539_18310 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_18315 IPR007016 O-antigen ligase-related AL539_18315 IPR021797 Protein of unknown function DUF3366 AL539_18315 IPR031726 AL539_18315 AL539_18320 IPR000192 Aminotransferase class V domain AL539_18320 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 AL539_18320 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 AL539_18320 IPR015424 Pyridoxal phosphate-dependent transferase AL539_18320 IPR020578 Aminotransferase class-V pyridoxal-phosphate binding site AL539_18320 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase AL539_18330 IPR001048 Aspartate/glutamate/uridylate kinase AL539_18330 IPR001341 Aspartate kinase domain AL539_18330 IPR005260 Aspartate kinase, monofunctional class AL539_18330 IPR018042 Aspartate kinase, conserved site AL539_18330 IPR036393 AL539_18330 AL539_18335 IPR000489 Pterin-binding AL539_18335 IPR003726 Homocysteine S-methyltransferase AL539_18335 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain AL539_18335 IPR004223 Vitamin B12-dependent methionine synthase, activation domain AL539_18335 IPR006158 Cobalamin (vitamin B12)-binding domain AL539_18335 IPR011005 Dihydropteroate synthase-like AL539_18335 IPR011822 Cobalamin-dependent methionine synthase AL539_18335 IPR036589 AL539_18335 AL539_18335 IPR036594 AL539_18335 AL539_18335 IPR036724 AL539_18335 AL539_18335 IPR037010 AL539_18335 AL539_18340 IPR006153 Cation/H+ exchanger AL539_18400 IPR002500 Phosphoadenosine phosphosulphate reductase AL539_18400 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase AL539_18400 IPR011800 Phosphoadenosine phosphosulphate reductase CysH AL539_18400 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL539_18405 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain AL539_18405 IPR006066 Nitrite/sulphite reductase iron-sulphur/siroheam-binding site AL539_18405 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain AL539_18405 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit AL539_18405 IPR036136 AL539_18405 AL539_18410 IPR001094 Flavodoxin AL539_18410 IPR001433 Oxidoreductase FAD/NAD(P)-binding AL539_18410 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase AL539_18410 IPR003097 FAD-binding, type 1 AL539_18410 IPR008254 Flavodoxin/nitric oxide synthase AL539_18410 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain AL539_18410 IPR017938 Riboflavin synthase-like beta-barrel AL539_18410 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain-3 AL539_18410 IPR029039 Flavoprotein-like AL539_18410 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria AL539_18410 IPR039261 AL539_18410 AL539_18420 IPR026387 Outer membrane protein AL539_18420 IPR027385 Outer membrane protein beta-barrel AL539_18425 IPR014318 Phage shock protein, PspG AL539_18430 IPR001269 tRNA-dihydrouridine synthase AL539_18430 IPR004653 tRNA-dihydrouridine synthase, TIM-barrel, YjbN AL539_18430 IPR013785 Aldolase-type TIM barrel AL539_18430 IPR018517 tRNA-dihydrouridine synthase, conserved site AL539_18435 IPR002481 Ferric-uptake regulator AL539_18435 IPR036388 AL539_18435 AL539_18435 IPR036390 AL539_18435 AL539_18440 IPR028051 Chemotaxis phosphatase CheX-like domain AL539_18440 IPR028976 CheC-like domain AL539_18445 IPR001672 Phosphoglucose isomerase (PGI) AL539_18445 IPR018189 Phosphoglucose isomerase, conserved site AL539_18445 IPR023096 Phosphoglucose isomerase, C-terminal AL539_18450 IPR001602 Uncharacterised protein family UPF0047 AL539_18450 IPR035917 AL539_18450 AL539_18455 IPR000821 Alanine racemase AL539_18455 IPR001608 Alanine racemase, N-terminal AL539_18455 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal AL539_18455 IPR011079 Alanine racemase, C-terminal AL539_18455 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site AL539_18455 IPR029066 PLP-binding barrel AL539_18460 IPR007692 DNA helicase, DnaB type AL539_18460 IPR007693 DNA helicase, DnaB-like, N-terminal AL539_18460 IPR007694 DNA helicase, DnaB-like, C-terminal AL539_18460 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal AL539_18460 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_18460 IPR036185 AL539_18460 AL539_18465 IPR007433 Protein of unknown function DUF481 AL539_18470 IPR009027 Ribosomal protein L9/RNase H1, N-terminal AL539_18470 IPR020069 Ribosomal protein L9, C-terminal AL539_18470 IPR020070 Ribosomal protein L9, N-terminal AL539_18470 IPR020594 Ribosomal protein L9, bacteria/chloroplast AL539_18470 IPR036791 AL539_18470 AL539_18470 IPR036935 AL539_18470 AL539_18475 IPR001648 Ribosomal protein S18 AL539_18475 IPR018275 Ribosomal protein S18, conserved site AL539_18475 IPR036870 AL539_18475 AL539_18480 IPR000424 Primosome PriB/single-strand DNA-binding AL539_18480 IPR012340 Nucleic acid-binding, OB-fold AL539_18480 IPR023646 Primosomal replication protein PriB AL539_18485 IPR000529 Ribosomal protein S6 AL539_18485 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 AL539_18485 IPR020814 Ribosomal protein S6, plastid/chloroplast AL539_18485 IPR020815 Ribosomal protein S6, conserved site AL539_18485 IPR035980 AL539_18485 AL539_18490 IPR000056 Ribulose-phosphate 3-epimerase-like AL539_18490 IPR011060 Ribulose-phosphate binding barrel AL539_18490 IPR013785 Aldolase-type TIM barrel AL539_18490 IPR026019 Ribulose-phosphate 3-epimerase AL539_18495 IPR002052 DNA methylase, N-6 adenine-specific, conserved site AL539_18495 IPR012263 Adenine modification methylase, M.EcoRV-type AL539_18495 IPR012327 D12 class N6 adenine-specific DNA methyltransferase AL539_18495 IPR023095 Adenine-specific methyltransferase, domain 2 AL539_18495 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like AL539_18500 IPR003593 AAA+ ATPase domain AL539_18500 IPR007730 Sporulation-related domain AL539_18500 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_18500 IPR036680 AL539_18500 AL539_18505 IPR016037 3-dehydroquinate synthase AroB AL539_18505 IPR030960 AL539_18505 AL539_18505 IPR030963 AL539_18505 AL539_18510 IPR000623 Shikimate kinase/Threonine synthase-like 1 AL539_18510 IPR023000 Shikimate kinase, conserved site AL539_18510 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_18510 IPR031322 AL539_18510 AL539_18515 IPR001775 GspD/PilQ family AL539_18515 IPR004845 Type II secretion system GspD, conserved site AL539_18515 IPR004846 Type II/III secretion system AL539_18515 IPR005644 NolW-like AL539_18515 IPR011662 Secretin/TonB, short N-terminal AL539_18515 IPR013355 Type IV pilus secretin PilQ AL539_18515 IPR038591 AL539_18515 AL539_18520 IPR007446 Pilus assembly protein PilP AL539_18525 IPR007445 Pilus assembly protein, PilO AL539_18525 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 AL539_18530 IPR007813 Fimbrial assembly PilN AL539_18535 IPR003494 SHS2 domain inserted in FtsA AL539_18535 IPR005883 Type IV pilus assembly protein PilM AL539_18540 IPR001264 Glycosyl transferase, family 51 AL539_18540 IPR001460 Penicillin-binding protein, transpeptidase AL539_18540 IPR012338 Beta-lactamase/transpeptidase-like AL539_18540 IPR023346 Lysozyme-like domain AL539_18540 IPR031376 AL539_18540 AL539_18540 IPR036950 AL539_18540 AL539_18545 IPR000847 Transcription regulator HTH, LysR AL539_18545 IPR005119 LysR, substrate-binding AL539_18545 IPR036388 AL539_18545 AL539_18545 IPR036390 AL539_18545 AL539_18550 IPR002109 Glutaredoxin AL539_18550 IPR011767 Glutaredoxin active site AL539_18550 IPR011906 Glutaredoxin domain AL539_18550 IPR013740 Redoxin AL539_18550 IPR014025 Glutaredoxin subgroup AL539_18550 IPR036249 AL539_18550 AL539_18555 IPR001100 AL539_18555 AL539_18555 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AL539_18555 IPR016156 FAD/NAD-linked reductase, dimerisation domain AL539_18555 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain AL539_18555 IPR036188 AL539_18555 AL539_18555 IPR036324 AL539_18555 AL539_18560 IPR022072 Protein of unknown function DUF3624 AL539_18565 IPR000182 GNAT domain AL539_18565 IPR000362 Fumarate lyase family AL539_18565 IPR008948 L-Aspartase-like AL539_18565 IPR009049 Argininosuccinate lyase AL539_18565 IPR011244 Bifunctional argininosuccinate lyase/acetyltransferase AL539_18565 IPR016181 Acyl-CoA N-acyltransferase AL539_18565 IPR020557 Fumarate lyase, conserved site AL539_18565 IPR022761 Fumarate lyase, N-terminal AL539_18565 IPR024083 Fumarase/histidase, N-terminal AL539_18565 IPR029419 Argininosuccinate lyase, C-terminal AL539_18570 IPR001518 Argininosuccinate synthase AL539_18570 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL539_18570 IPR018223 Argininosuccinate synthase, conserved site AL539_18570 IPR023434 Argininosuccinate synthase, type 1 subfamily AL539_18570 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body AL539_18575 IPR001048 Aspartate/glutamate/uridylate kinase AL539_18575 IPR004662 Acetylglutamate kinase AL539_18575 IPR036393 AL539_18575 AL539_18575 IPR037528 AL539_18575 AL539_18580 IPR000534 Semialdehyde dehydrogenase, NAD-binding AL539_18580 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 AL539_18580 IPR012280 Semialdehyde dehydrogenase, dimerisation domain AL539_18580 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site AL539_18580 IPR036291 AL539_18580 AL539_18585 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site AL539_18585 IPR002933 Peptidase M20 AL539_18585 IPR010169 Acetylornithine deacetylase (ArgE) AL539_18585 IPR011650 Peptidase M20, dimerisation domain AL539_18585 IPR036264 AL539_18585 AL539_18590 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain AL539_18590 IPR018129 Phosphoenolpyruvate carboxylase, active site AL539_18590 IPR021135 Phosphoenolpyruvate carboxylase AL539_18590 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type AL539_18590 IPR033129 AL539_18590 AL539_18595 IPR005149 Transcription regulator PadR N-terminal AL539_18595 IPR018309 Transcription regulator PadR, C-terminal AL539_18595 IPR036388 AL539_18595 AL539_18595 IPR036390 AL539_18595 AL539_18600 IPR003171 Methylenetetrahydrofolate reductase AL539_18600 IPR004620 5,10-methylenetetrahydrofolate reductase AL539_18600 IPR029041 FAD-linked oxidoreductase-like AL539_18605 IPR001048 Aspartate/glutamate/uridylate kinase AL539_18605 IPR001341 Aspartate kinase domain AL539_18605 IPR001342 Homoserine dehydrogenase, catalytic AL539_18605 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding AL539_18605 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I AL539_18605 IPR018042 Aspartate kinase, conserved site AL539_18605 IPR019811 Homoserine dehydrogenase, conserved site AL539_18605 IPR036291 AL539_18605 AL539_18605 IPR036393 AL539_18605 AL539_18610 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme AL539_18610 IPR011821 O-succinylhomoserine (thiol)-lyase AL539_18610 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 AL539_18610 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 AL539_18610 IPR015424 Pyridoxal phosphate-dependent transferase AL539_18615 IPR002084 Methionine repressor MetJ AL539_18615 IPR010985 Ribbon-helix-helix AL539_18615 IPR023453 Methionine repressor MetJ domain AL539_18620 IPR001891 Malic oxidoreductase AL539_18620 IPR012301 Malic enzyme, N-terminal domain AL539_18620 IPR012302 Malic enzyme, NAD-binding AL539_18620 IPR015884 Malic enzyme, conserved site AL539_18620 IPR036291 AL539_18620 AL539_18620 IPR037062 AL539_18620 AL539_18625 IPR002024 Bacterioferritin AL539_18625 IPR008331 Ferritin/DPS protein domain AL539_18625 IPR009078 Ferritin-like superfamily AL539_18625 IPR012347 Ferritin-related AL539_18630 IPR007419 BFD-like [2Fe-2S]-binding domain AL539_18635 IPR000795 Elongation factor, GTP-binding domain AL539_18635 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal AL539_18635 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 AL539_18635 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle AL539_18635 IPR005225 Small GTP-binding protein domain AL539_18635 IPR009000 Translation protein, beta-barrel domain AL539_18635 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal AL539_18635 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_18635 IPR031157 AL539_18635 AL539_18640 IPR000640 Translation elongation factor EFG, V domain AL539_18640 IPR000795 Elongation factor, GTP-binding domain AL539_18640 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 AL539_18640 IPR004540 Translation elongation factor EFG/EF2 AL539_18640 IPR005225 Small GTP-binding protein domain AL539_18640 IPR005517 Translation elongation factor EFG/EF2, domain IV AL539_18640 IPR009000 Translation protein, beta-barrel domain AL539_18640 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AL539_18640 IPR020568 Ribosomal protein S5 domain 2-type fold AL539_18640 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_18640 IPR031157 AL539_18640 AL539_18640 IPR035647 AL539_18640 AL539_18645 IPR000235 Ribosomal protein S5/S7 AL539_18645 IPR005717 Ribosomal protein S7, bacterial/organellar-type AL539_18645 IPR020606 Ribosomal protein S7, conserved site AL539_18645 IPR023798 Ribosomal protein S7 domain AL539_18645 IPR036823 AL539_18645 AL539_18650 IPR005679 Ribosomal protein S12, bacteria AL539_18650 IPR006032 Ribosomal protein S12/S23 AL539_18650 IPR012340 Nucleic acid-binding, OB-fold AL539_18655 IPR007215 Sulphur relay, TusB/DsrH AL539_18655 IPR027396 DsrEFH-like AL539_18660 IPR003787 Sulphur relay, DsrE/F-like protein AL539_18660 IPR017462 Sulphur relay, TusC/DsrF AL539_18660 IPR027396 DsrEFH-like AL539_18665 IPR003787 Sulphur relay, DsrE/F-like protein AL539_18665 IPR017463 Sulphur relay, TusD/DsrE AL539_18665 IPR027396 DsrEFH-like AL539_18670 IPR013559 YheO-like AL539_18670 IPR039445 AL539_18670 AL539_18675 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal AL539_18675 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain AL539_18675 IPR036944 AL539_18675 AL539_18680 IPR001680 WD40 repeat AL539_18680 IPR002372 Pyrrolo-quinoline quinone repeat AL539_18680 IPR011047 Quinonprotein alcohol dehydrogenase-like superfamily AL539_18680 IPR015943 WD40/YVTN repeat-like-containing domain AL539_18680 IPR019775 WD40 repeat, conserved site AL539_18685 IPR007236 SlyX AL539_18690 IPR000246 Peptidase T2, asparaginase 2 AL539_18690 IPR029055 Nucleophile aminohydrolases, N-terminal AL539_18700 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain AL539_18705 IPR012658 Conserved hypothetical protein CHP02443 AL539_18710 IPR003148 Regulator of K+ conductance, N-terminal AL539_18710 IPR004771 K+/H+ exchanger AL539_18710 IPR006036 Potassium uptake protein TrkA AL539_18710 IPR006153 Cation/H+ exchanger AL539_18710 IPR020884 Glutathione-regulated potassium-efflux system protein KefB AL539_18710 IPR036291 AL539_18710 AL539_18710 IPR038770 AL539_18710 AL539_18715 IPR003680 Flavodoxin-like fold AL539_18715 IPR023947 Glutathione-regulated potassium-efflux system ancillary protein KefG AL539_18715 IPR029039 Flavoprotein-like AL539_18720 IPR003439 ABC transporter-like AL539_18720 IPR003593 AAA+ ATPase domain AL539_18720 IPR017871 ABC transporter, conserved site AL539_18720 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_18720 IPR032781 AL539_18720 AL539_18725 IPR012659 Conserved hypothetical protein CHP02444 AL539_18730 IPR000073 Alpha/beta hydrolase fold-1 AL539_18730 IPR000952 Uncharacterised protein family UPF0017, hydrolase-like, conserved site AL539_18730 IPR012020 AB-hydrolase YheT, putative AL539_18730 IPR029058 Alpha/Beta hydrolase fold AL539_18735 IPR010648 Uncharacterised protein family UPF0270 AL539_18735 IPR036685 AL539_18735 AL539_18740 IPR006082 Phosphoribulokinase AL539_18740 IPR006083 Phosphoribulokinase/uridine kinase AL539_18740 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_18745 IPR000595 Cyclic nucleotide-binding domain AL539_18745 IPR012318 Helix-turn-helix motif, Crp-type AL539_18745 IPR014710 RmlC-like jelly roll fold AL539_18745 IPR018335 Transcription regulator HTH, Crp-type, conserved site AL539_18745 IPR018488 Cyclic nucleotide-binding, conserved site AL539_18745 IPR018490 Cyclic nucleotide-binding-like AL539_18745 IPR036388 AL539_18745 AL539_18745 IPR036390 AL539_18745 AL539_18750 IPR009770 Domain of unknown function DUF1338 AL539_18755 IPR015590 Aldehyde dehydrogenase domain AL539_18755 IPR016160 Aldehyde dehydrogenase, cysteine active site AL539_18755 IPR016161 Aldehyde/histidinol dehydrogenase AL539_18755 IPR016162 Aldehyde dehydrogenase, N-terminal AL539_18755 IPR016163 Aldehyde dehydrogenase, C-terminal AL539_18755 IPR017649 Succinylglutamic semialdehyde dehydrogenase AL539_18755 IPR029510 Aldehyde dehydrogenase, glutamic acid active site AL539_18760 IPR007041 Arginine N-succinyltransferase Ast/AOST AL539_18760 IPR016181 Acyl-CoA N-acyltransferase AL539_18760 IPR017650 Arginine N-succinyltransferase AstA AL539_18765 IPR004636 Acetylornithine/Succinylornithine transaminase family AL539_18765 IPR005814 Aminotransferase class-III AL539_18765 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 AL539_18765 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 AL539_18765 IPR015424 Pyridoxal phosphate-dependent transferase AL539_18765 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria AL539_18770 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain AL539_18770 IPR017926 Glutamine amidotransferase AL539_18770 IPR029062 Class I glutamine amidotransferase-like AL539_18775 IPR000835 MarR-type HTH domain AL539_18775 IPR023187 Transcriptional regulator MarR-type, conserved site AL539_18775 IPR036388 AL539_18775 AL539_18775 IPR036390 AL539_18775 AL539_18780 IPR000620 Drug/metabolite transporter AL539_18785 IPR005025 NADPH-dependent FMN reductase-like AL539_18785 IPR029039 Flavoprotein-like AL539_18790 IPR002933 Peptidase M20 AL539_18790 IPR011650 Peptidase M20, dimerisation domain AL539_18790 IPR017439 Amidohydrolase AL539_18790 IPR036264 AL539_18790 AL539_18795 IPR004697 AbgT AL539_18800 IPR000847 Transcription regulator HTH, LysR AL539_18800 IPR005119 LysR, substrate-binding AL539_18800 IPR036388 AL539_18800 AL539_18800 IPR036390 AL539_18800 AL539_18805 IPR001322 Lamin Tail Domain AL539_18805 IPR005135 Endonuclease/exonuclease/phosphatase AL539_18805 IPR020008 GlyGly-CTERM domain AL539_18805 IPR036415 AL539_18805 AL539_18805 IPR036691 AL539_18805 AL539_18815 IPR002305 Aminoacyl-tRNA synthetase, class Ic AL539_18815 IPR002306 Tryptophan-tRNA ligase AL539_18815 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL539_18815 IPR024109 Tryptophan-tRNA ligase, bacterial-type AL539_18820 IPR006346 2-phosphoglycolate phosphatase, prokaryotic AL539_18820 IPR006439 HAD hydrolase, subfamily IA AL539_18820 IPR006549 HAD-superfamily hydrolase,subfamily IIIA AL539_18820 IPR023198 Phosphoglycolate phosphatase, domain 2 AL539_18820 IPR023214 HAD-like domain AL539_18820 IPR036412 AL539_18820 AL539_18820 IPR037512 AL539_18820 AL539_18825 IPR001537 tRNA/rRNA methyltransferase, SpoU type AL539_18825 IPR004441 RNA methyltransferase TrmH family AL539_18825 IPR013123 RNA 2-O ribose methyltransferase, substrate binding AL539_18825 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB AL539_18825 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AL539_18825 IPR029028 Alpha/beta knot methyltransferases AL539_18825 IPR029064 50S ribosomal protein L30e-like AL539_18830 IPR001900 AL539_18830 AL539_18830 IPR003029 Ribosomal protein S1, RNA-binding domain AL539_18830 IPR004476 Ribonuclease II/ribonuclease R AL539_18830 IPR011129 Cold shock protein AL539_18830 IPR011805 Ribonuclease R AL539_18830 IPR012340 Nucleic acid-binding, OB-fold AL539_18830 IPR013223 Ribonuclease B, N-terminal OB domain AL539_18830 IPR013668 Ribonuclease R winged-helix domain AL539_18830 IPR022966 Ribonuclease II/R, conserved site AL539_18830 IPR022967 RNA-binding domain, S1 AL539_18835 IPR000944 Transcription regulator Rrf2-like AL539_18835 IPR023761 Transcriptional repressor HTH, NsrR AL539_18835 IPR030489 AL539_18835 AL539_18835 IPR036388 AL539_18835 AL539_18835 IPR036390 AL539_18835 AL539_18840 IPR000971 Globin AL539_18840 IPR001221 Phenol hydroxylase reductase AL539_18840 IPR001433 Oxidoreductase FAD/NAD(P)-binding AL539_18840 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase AL539_18840 IPR008333 Oxidoreductase, FAD-binding domain AL539_18840 IPR009050 Globin-like AL539_18840 IPR012292 Globin, structural domain AL539_18840 IPR017938 Riboflavin synthase-like beta-barrel AL539_18840 IPR023950 Flavohemoprotein AL539_18840 IPR039261 AL539_18840 AL539_18845 IPR006597 Sel1-like AL539_18845 IPR011990 Tetratricopeptide-like helical domain AL539_18855 IPR001114 Adenylosuccinate synthetase AL539_18855 IPR018220 Adenylosuccinate synthase, active site AL539_18855 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_18855 IPR033128 AL539_18855 AL539_18860 IPR019201 Protein of unknown function DUF2065 AL539_18865 IPR001107 Band 7 protein AL539_18865 IPR010200 HflC AL539_18865 IPR036013 AL539_18865 AL539_18870 IPR001107 Band 7 protein AL539_18870 IPR001972 Stomatin family AL539_18870 IPR010201 HflK AL539_18870 IPR020980 Menbrane protein HflK, N-terminal AL539_18870 IPR036013 AL539_18870 AL539_18875 IPR006073 GTP binding domain AL539_18875 IPR016496 GTPase HflX AL539_18875 IPR025121 GTPase HflX N-terminal domain AL539_18875 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_18875 IPR032305 AL539_18875 AL539_18875 IPR035647 AL539_18875 AL539_18880 IPR005001 Host factor Hfq AL539_18880 IPR010920 Like-Sm (LSM) domain AL539_18885 IPR018022 tRNA delta(2)-isopentenylpyrophosphate transferase AL539_18885 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_18890 IPR002099 DNA mismatch repair protein family AL539_18890 IPR013507 DNA mismatch repair protein, C-terminal AL539_18890 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AL539_18890 IPR014762 DNA mismatch repair, conserved site AL539_18890 IPR014790 MutL, C-terminal, dimerisation AL539_18890 IPR020568 Ribosomal protein S5 domain 2-type fold AL539_18890 IPR020667 DNA mismatch repair protein, MutL AL539_18890 IPR036890 AL539_18890 AL539_18890 IPR037198 AL539_18890 AL539_18895 IPR002508 Cell wall hydrolase/autolysin, catalytic AL539_18895 IPR018392 LysM domain AL539_18895 IPR021731 AMIN domain AL539_18895 IPR036779 AL539_18895 AL539_18900 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE AL539_18900 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_18910 IPR004453 Epoxyqueuosine reductase QueG AL539_18910 IPR013542 Domain of unknown function DUF1730 AL539_18910 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL539_18975 IPR012337 Ribonuclease H-like domain AL539_18975 IPR013520 Exonuclease, RNase T/DNA polymerase III AL539_18975 IPR022894 Oligoribonuclease AL539_18975 IPR036397 AL539_18975 AL539_18980 IPR004881 Ribosome biogenesis GTPase RsgA, putative AL539_18980 IPR010914 EngC GTPase AL539_18980 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_18985 IPR003817 Phosphatidylserine decarboxylase-related AL539_18985 IPR033177 AL539_18985 AL539_18985 IPR033178 AL539_18985 AL539_18990 IPR001898 Sodium/sulphate symporter AL539_18995 IPR000620 Drug/metabolite transporter AL539_19000 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent AL539_19000 IPR006124 Metalloenzyme AL539_19000 IPR011258 BPG-independent PGAM, N-terminal AL539_19000 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha AL539_19000 IPR017850 Alkaline-phosphatase-like, core domain AL539_19000 IPR036646 AL539_19000 AL539_19005 IPR001763 Rhodanese-like domain AL539_19005 IPR036873 AL539_19005 AL539_19010 IPR003708 Bacterial protein export chaperone SecB AL539_19010 IPR035958 AL539_19010 AL539_19015 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal AL539_19015 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent AL539_19015 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like AL539_19015 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal AL539_19015 IPR013328 Dehydrogenase, multihelical AL539_19015 IPR036291 AL539_19015 AL539_19020 IPR001451 Bacterial transferase hexapeptide repeat AL539_19020 IPR005881 Serine O-acetyltransferase AL539_19020 IPR010493 Serine acetyltransferase, N-terminal AL539_19020 IPR011004 Trimeric LpxA-like AL539_19020 IPR018357 Hexapeptide transferase, conserved site AL539_19025 IPR011055 Duplicated hybrid motif AL539_19025 IPR016047 Peptidase M23 AL539_19030 IPR038763 AL539_19030 AL539_19035 IPR001647 DNA-binding HTH domain, TetR-type AL539_19035 IPR009057 Homeodomain-like AL539_19035 IPR025722 Bacterial transcriptional repressor TetR AL539_19040 IPR006976 VanZ-like AL539_19045 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) AL539_19045 IPR004525 Elongation factor P--(R)-beta-lysine ligase AL539_19050 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site AL539_19050 IPR003953 FAD binding domain AL539_19050 IPR005884 Fumarate reductase, flavoprotein subunit AL539_19050 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit AL539_19050 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal AL539_19050 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain AL539_19050 IPR036188 AL539_19050 AL539_19050 IPR037099 AL539_19050 AL539_19055 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein AL539_19055 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site AL539_19055 IPR009051 Alpha-helical ferredoxin AL539_19055 IPR012675 Beta-grasp domain AL539_19055 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL539_19055 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL539_19055 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal AL539_19055 IPR036010 AL539_19055 AL539_19060 IPR003510 Fumarate reductase, subunit C AL539_19060 IPR034804 AL539_19060 AL539_19065 IPR003418 Fumarate reductase, D subunit AL539_19065 IPR034804 AL539_19065 AL539_19070 IPR001107 Band 7 protein AL539_19075 IPR001059 Translation elongation factor P/YeiP, central AL539_19075 IPR008991 Translation protein SH3-like domain AL539_19075 IPR011768 Translation elongation factor P AL539_19075 IPR012340 Nucleic acid-binding, OB-fold AL539_19075 IPR013185 Translation elongation factor, KOW-like AL539_19075 IPR013852 Translation elongation factor P/YeiP, conserved site AL539_19075 IPR014722 Ribosomal protein L2 domain 2 AL539_19075 IPR015365 Elongation factor P, C-terminal AL539_19075 IPR020599 Translation elongation factor P/YeiP AL539_19080 IPR003739 Lysine-2,3-aminomutase family AL539_19080 IPR007197 Radical SAM AL539_19080 IPR013785 Aldolase-type TIM barrel AL539_19080 IPR022462 Lysine-2,3-aminomutase-like AL539_19085 IPR003416 MgtC/SapB/SrpB transporter AL539_19095 IPR001844 Chaperonin Cpn60 AL539_19095 IPR002423 Chaperonin Cpn60/TCP-1 AL539_19095 IPR018370 Chaperonin Cpn60, conserved site AL539_19095 IPR027409 GroEL-like apical domain AL539_19095 IPR027410 TCP-1-like chaperonin intermediate domain AL539_19095 IPR027413 GroEL-like equatorial domain AL539_19100 IPR011032 GroES (chaperonin 10)-like AL539_19100 IPR018369 Chaperonin Cpn10, conserved site AL539_19100 IPR020818 Chaperonin Cpn10 AL539_19100 IPR037124 AL539_19100 AL539_19105 IPR002528 Multi antimicrobial extrusion protein AL539_19110 IPR000023 Phosphofructokinase domain AL539_19110 IPR012003 ATP-dependent phosphofructokinase, prokaryotic-type AL539_19110 IPR012828 6-phosphofructokinase AL539_19110 IPR015912 Phosphofructokinase, conserved site AL539_19110 IPR022953 Phosphofructokinase AL539_19110 IPR035966 AL539_19110 AL539_19115 IPR002524 Cation efflux protein AL539_19115 IPR027469 Cation efflux protein transmembrane domain AL539_19115 IPR027470 Cation efflux protein cytoplasmic domain AL539_19115 IPR036837 AL539_19115 AL539_19120 IPR012899 LTXXQ motif family protein AL539_19125 IPR001789 Signal transduction response regulator, receiver domain AL539_19125 IPR001867 Signal transduction response regulator, C-terminal AL539_19125 IPR011006 CheY-like superfamily AL539_19125 IPR016032 Signal transduction response regulator, C-terminal effector AL539_19125 IPR036388 AL539_19125 AL539_19130 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_19130 IPR003660 HAMP linker domain AL539_19130 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain AL539_19130 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AL539_19130 IPR032404 AL539_19130 AL539_19130 IPR036097 AL539_19130 AL539_19130 IPR036890 AL539_19130 AL539_19130 IPR038515 AL539_19130 AL539_19135 IPR001189 Manganese/iron superoxide dismutase AL539_19135 IPR019831 Manganese/iron superoxide dismutase, N-terminal AL539_19135 IPR019832 Manganese/iron superoxide dismutase, C-terminal AL539_19135 IPR019833 Manganese/iron superoxide dismutase, binding site AL539_19135 IPR036314 AL539_19135 AL539_19135 IPR036324 AL539_19135 AL539_19140 IPR001537 tRNA/rRNA methyltransferase, SpoU type AL539_19140 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase AL539_19140 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AL539_19140 IPR029028 Alpha/beta knot methyltransferases AL539_19145 IPR007313 FxsA cytoplasmic membrane protein AL539_19150 IPR000362 Fumarate lyase family AL539_19150 IPR004708 Aspartate ammonia-lyase AL539_19150 IPR008948 L-Aspartase-like AL539_19150 IPR018951 Fumarase C, C-terminal AL539_19150 IPR020557 Fumarate lyase, conserved site AL539_19150 IPR022761 Fumarate lyase, N-terminal AL539_19150 IPR024083 Fumarase/histidase, N-terminal AL539_19155 IPR004668 Anaerobic c4-dicarboxylate membrane transporter AL539_19160 IPR003834 Cytochrome c assembly protein, transmembrane domain AL539_19160 IPR017937 Thioredoxin, conserved site AL539_19160 IPR022910 Thiol:disulphide interchange protein DsbD AL539_19160 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain AL539_19160 IPR036249 AL539_19160 AL539_19160 IPR036929 AL539_19160 AL539_19165 IPR000792 Transcription regulator LuxR, C-terminal AL539_19165 IPR001789 Signal transduction response regulator, receiver domain AL539_19165 IPR011006 CheY-like superfamily AL539_19165 IPR036388 AL539_19165 AL539_19170 IPR005170 Transporter-associated domain AL539_19170 IPR006037 Regulator of K+ conductance, C-terminal AL539_19170 IPR006153 Cation/H+ exchanger AL539_19170 IPR023729 K(+)/H(+) antiporter NhaP2 AL539_19170 IPR036318 AL539_19170 AL539_19170 IPR036721 AL539_19170 AL539_19170 IPR038770 AL539_19170 AL539_19175 IPR019886 Sodium symporter small subunit, predicted AL539_19180 IPR001734 Sodium/solute symporter AL539_19180 IPR019899 Sodium/solute symporter, VC2705 subfamily AL539_19180 IPR038377 AL539_19180 AL539_19195 IPR000362 Fumarate lyase family AL539_19195 IPR005677 Fumarate hydratase, class II AL539_19195 IPR008948 L-Aspartase-like AL539_19195 IPR018951 Fumarase C, C-terminal AL539_19195 IPR020557 Fumarate lyase, conserved site AL539_19195 IPR022761 Fumarate lyase, N-terminal AL539_19195 IPR024083 Fumarase/histidase, N-terminal AL539_19200 IPR001789 Signal transduction response regulator, receiver domain AL539_19200 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_19200 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain AL539_19200 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AL539_19200 IPR011006 CheY-like superfamily AL539_19200 IPR035965 AL539_19200 AL539_19200 IPR036097 AL539_19200 AL539_19200 IPR036890 AL539_19200 AL539_19200 IPR038377 AL539_19200 AL539_19205 IPR024989 Major facilitator superfamily associated domain AL539_19205 IPR026032 Phenylproprionate/maltose permease AL539_19205 IPR036259 AL539_19205 AL539_19210 IPR000595 Cyclic nucleotide-binding domain AL539_19210 IPR005105 Protein-PII uridylyltransferase, N-terminal AL539_19210 IPR014710 RmlC-like jelly roll fold AL539_19210 IPR018490 Cyclic nucleotide-binding-like AL539_19210 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding AL539_19215 IPR012337 Ribonuclease H-like domain AL539_19215 IPR013520 Exonuclease, RNase T/DNA polymerase III AL539_19215 IPR036397 AL539_19215 AL539_19220 IPR000873 AMP-dependent synthetase/ligase AL539_19220 IPR011904 Acetate-CoA ligase AL539_19220 IPR020845 AMP-binding, conserved site AL539_19220 IPR025110 AMP-binding enzyme C-terminal domain AL539_19220 IPR032387 AL539_19220 AL539_19225 IPR001874 Dehydroquinase, class II AL539_19225 IPR018509 Dehydroquinase, class II, conserved site AL539_19225 IPR036441 AL539_19225 AL539_19230 IPR000089 Biotin/lipoyl attachment AL539_19230 IPR001249 Acetyl-CoA biotin carboxyl carrier AL539_19230 IPR001882 Biotin-binding site AL539_19230 IPR011053 Single hybrid motif AL539_19235 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase AL539_19235 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain AL539_19235 IPR005481 Carbamoyl-phosphate synthase, large subunit, N-terminal AL539_19235 IPR005482 Biotin carboxylase, C-terminal AL539_19235 IPR011054 Rudiment single hybrid motif AL539_19235 IPR013815 ATP-grasp fold, subdomain 1 AL539_19235 IPR016185 Pre-ATP-grasp domain AL539_19245 IPR004498 Ribosomal protein L11 methyltransferase AL539_19245 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like AL539_19250 IPR001269 tRNA-dihydrouridine synthase AL539_19250 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 AL539_19250 IPR013785 Aldolase-type TIM barrel AL539_19250 IPR018517 tRNA-dihydrouridine synthase, conserved site AL539_19250 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal AL539_19250 IPR032887 AL539_19250 AL539_19255 IPR002197 DNA binding HTH domain, Fis-type AL539_19255 IPR005412 DNA-binding protein Fis AL539_19255 IPR009057 Homeodomain-like AL539_19260 IPR001958 Tetracycline resistance protein, TetA/multidrug resistance protein MdtG AL539_19260 IPR011701 Major facilitator superfamily AL539_19260 IPR036259 AL539_19260 AL539_19265 IPR003439 ABC transporter-like AL539_19265 IPR003593 AAA+ ATPase domain AL539_19265 IPR017871 ABC transporter, conserved site AL539_19265 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_19265 IPR032781 AL539_19265 AL539_19330 IPR000310 Orn/Lys/Arg decarboxylase, major domain AL539_19330 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal AL539_19330 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal AL539_19330 IPR011193 Ornithine/lysine/arginine decarboxylase AL539_19330 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 AL539_19330 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 AL539_19330 IPR015424 Pyridoxal phosphate-dependent transferase AL539_19330 IPR036633 AL539_19330 AL539_19335 IPR002293 Amino acid/polyamine transporter I AL539_19345 IPR001867 Signal transduction response regulator, C-terminal AL539_19345 IPR011990 Tetratricopeptide-like helical domain AL539_19345 IPR016032 Signal transduction response regulator, C-terminal effector AL539_19345 IPR036388 AL539_19345 AL539_19350 IPR000551 MerR-type HTH domain AL539_19350 IPR009061 DNA binding domain, putative AL539_19350 IPR011788 Zn(II)-responsive transcriptional regulator AL539_19350 IPR015358 Transcription regulator MerR, DNA binding AL539_19360 IPR002695 AICARFT/IMPCHase bienzyme AL539_19360 IPR011607 Methylglyoxal synthase-like domain AL539_19360 IPR016193 Cytidine deaminase-like AL539_19360 IPR024051 AICAR transformylase domain AL539_19360 IPR036914 AL539_19360 AL539_19365 IPR000115 Phosphoribosylglycinamide synthetase AL539_19365 IPR011054 Rudiment single hybrid motif AL539_19365 IPR013815 ATP-grasp fold, subdomain 1 AL539_19365 IPR016185 Pre-ATP-grasp domain AL539_19365 IPR020559 Phosphoribosylglycinamide synthetase, conserved site AL539_19365 IPR020560 Phosphoribosylglycinamide synthetase, C-domain AL539_19365 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AL539_19365 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal AL539_19365 IPR037123 AL539_19365 AL539_19370 IPR010858 Protein of unknown function DUF1481 AL539_19370 IPR016872 Uncharacterised conserved protein UCP028160 AL539_19375 IPR000119 Histone-like bacterial DNA-binding protein AL539_19375 IPR010992 Integration host factor (IHF)-like DNA-binding domain AL539_19375 IPR020816 Histone-like DNA-binding protein, conserved site AL539_19380 IPR000644 CBS domain AL539_19380 IPR002550 Domain of unknown function DUF21 AL539_19385 IPR007338 Protein of unknown function DUF416 AL539_19385 IPR023381 YP001051499.1-like domain AL539_19390 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain AL539_19390 IPR036291 AL539_19390 AL539_19395 IPR005122 Uracil-DNA glycosylase-like AL539_19395 IPR036895 AL539_19395 AL539_19400 IPR000257 Uroporphyrinogen decarboxylase (URO-D) AL539_19400 IPR006361 Uroporphyrinogen decarboxylase HemE AL539_19400 IPR038071 AL539_19400 AL539_19405 IPR000086 NUDIX hydrolase domain AL539_19405 IPR015376 Zinc ribbon, NADH pyrophosphatase AL539_19405 IPR015797 NUDIX hydrolase domain-like AL539_19405 IPR020084 NUDIX hydrolase, conserved site AL539_19405 IPR022925 NADH pyrophosphatase NudC AL539_19410 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ AL539_19410 IPR038309 AL539_19410 AL539_19415 IPR000722 RNA polymerase, alpha subunit AL539_19415 IPR006592 RNA polymerase, N-terminal AL539_19415 IPR007066 RNA polymerase Rpb1, domain 3 AL539_19415 IPR007080 RNA polymerase Rpb1, domain 1 AL539_19415 IPR007081 RNA polymerase Rpb1, domain 5 AL539_19415 IPR007083 RNA polymerase Rpb1, domain 4 AL539_19415 IPR012754 DNA-directed RNA polymerase, subunit beta-prime AL539_19415 IPR038120 AL539_19415 AL539_19420 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 AL539_19420 IPR007121 RNA polymerase, beta subunit, conserved site AL539_19420 IPR007641 RNA polymerase Rpb2, domain 7 AL539_19420 IPR007642 RNA polymerase Rpb2, domain 2 AL539_19420 IPR007644 RNA polymerase, beta subunit, protrusion AL539_19420 IPR007645 RNA polymerase Rpb2, domain 3 AL539_19420 IPR010243 DNA-directed RNA polymerase, beta subunit AL539_19420 IPR014724 RNA polymerase Rpb2, OB-fold AL539_19420 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain AL539_19420 IPR037033 AL539_19420 AL539_19420 IPR037034 AL539_19420 AL539_19425 IPR000206 Ribosomal protein L7/L12 AL539_19425 IPR008932 Ribosomal protein L7/L12, oligomerisation AL539_19425 IPR013823 Ribosomal protein L7/L12, C-terminal AL539_19425 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like AL539_19425 IPR036235 AL539_19425 AL539_19430 IPR001790 Ribosomal protein L10/acidic P0 AL539_19430 IPR002363 Ribosomal protein L10, eubacterial, conserved site AL539_19430 IPR022973 Ribosomal protein L10 AL539_19435 IPR002143 Ribosomal protein L1 AL539_19435 IPR005878 Ribosomal protein L1, bacterial-type AL539_19435 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich AL539_19435 IPR023673 Ribosomal protein L1, conserved site AL539_19435 IPR023674 Ribosomal protein L1-like AL539_19435 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein AL539_19440 IPR000911 Ribosomal protein L11/L12 AL539_19440 IPR006519 Ribosomal protein L11, bacterial-type AL539_19440 IPR020783 Ribosomal protein L11, C-terminal AL539_19440 IPR020784 Ribosomal protein L11, N-terminal AL539_19440 IPR020785 Ribosomal protein L11, conserved site AL539_19440 IPR036769 AL539_19440 AL539_19440 IPR036796 AL539_19440 AL539_19445 IPR001062 Transcription antitermination protein, NusG AL539_19445 IPR005824 KOW AL539_19445 IPR006645 NusG, N-terminal AL539_19445 IPR008991 Translation protein SH3-like domain AL539_19445 IPR014722 Ribosomal protein L2 domain 2 AL539_19445 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site AL539_19445 IPR036735 AL539_19445 AL539_19450 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit AL539_19450 IPR005807 SecE subunit of protein translocation complex AL539_19450 IPR038379 AL539_19450 AL539_19460 IPR000795 Elongation factor, GTP-binding domain AL539_19460 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal AL539_19460 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 AL539_19460 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle AL539_19460 IPR005225 Small GTP-binding protein domain AL539_19460 IPR009000 Translation protein, beta-barrel domain AL539_19460 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal AL539_19460 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_19460 IPR031157 AL539_19460 AL539_19485 IPR004566 Bacterial pantothenate kinase AL539_19485 IPR006083 Phosphoribulokinase/uridine kinase AL539_19485 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_19490 IPR003142 Biotin protein ligase, C-terminal AL539_19490 IPR004143 Biotin/lipoate A/B protein ligase AL539_19490 IPR004408 Biotin--acetyl-CoA-carboxylase ligase AL539_19490 IPR008988 Transcriptional repressor, C-terminal AL539_19490 IPR013196 Helix-turn-helix, type 11 AL539_19490 IPR030855 AL539_19490 AL539_19490 IPR036388 AL539_19490 AL539_19490 IPR036390 AL539_19490 AL539_19495 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase AL539_19495 IPR006094 FAD linked oxidase, N-terminal AL539_19495 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal AL539_19495 IPR016167 FAD-binding, type 2, subdomain 1 AL539_19495 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 AL539_19495 IPR036318 AL539_19495 AL539_19495 IPR036635 AL539_19495 AL539_19500 IPR000182 GNAT domain AL539_19500 IPR016181 Acyl-CoA N-acyltransferase AL539_19505 IPR001736 Phospholipase D/Transphosphatidylase AL539_19505 IPR025202 Phospholipase D-like domain AL539_19570 IPR000504 RNA recognition motif domain AL539_19570 IPR012677 Nucleotide-binding, alpha-beta plait AL539_19570 IPR035979 AL539_19570 AL539_19575 IPR001920 Asp/Glu racemase AL539_19575 IPR004391 Glutamate racemase AL539_19575 IPR015942 Asp/Glu/hydantoin racemase AL539_19575 IPR018187 Asp/Glu racemase, active site AL539_19580 IPR002761 DUF71 domain AL539_19580 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL539_19585 IPR000531 TonB-dependent receptor, beta-barrel AL539_19585 IPR010101 TonB-dependent vitamin B12 transporter BtuB AL539_19585 IPR012910 TonB-dependent receptor, plug AL539_19585 IPR036942 AL539_19585 AL539_19585 IPR037066 AL539_19585 AL539_19590 IPR010280 (Uracil-5)-methyltransferase family AL539_19590 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA AL539_19590 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like AL539_19590 IPR030390 AL539_19590 AL539_19590 IPR030391 AL539_19590 AL539_19595 IPR009867 Protein of unknown function DUF1422 AL539_19600 IPR001647 DNA-binding HTH domain, TetR-type AL539_19600 IPR009057 Homeodomain-like AL539_19600 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AL539_19605 IPR001100 AL539_19605 AL539_19605 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AL539_19605 IPR016156 FAD/NAD-linked reductase, dimerisation domain AL539_19605 IPR022962 Soluble pyridine nucleotide transhydrogenase AL539_19605 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain AL539_19605 IPR036188 AL539_19605 AL539_19610 IPR002528 Multi antimicrobial extrusion protein AL539_19615 IPR007213 Leucine carboxyl methyltransferase AL539_19615 IPR016874 Tetracenomycin polyketide synthesis O-methyltransferase TcmP AL539_19615 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like AL539_19625 IPR006197 Peptidase S24, LexA-like AL539_19625 IPR006199 LexA repressor, DNA-binding domain AL539_19625 IPR006200 LexA repressor AL539_19625 IPR015927 Peptidase S24/S26A/S26B/S26C AL539_19625 IPR036286 AL539_19625 AL539_19625 IPR036388 AL539_19625 AL539_19625 IPR036390 AL539_19625 AL539_19635 IPR002123 Phospholipid/glycerol acyltransferase AL539_19635 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase AL539_19635 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB AL539_19640 IPR000537 UbiA prenyltransferase family AL539_19640 IPR006370 4-hydroxybenzoate polyprenyl transferase AL539_19645 IPR007440 Chorismate--pyruvate lyase AL539_19645 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AL539_19650 IPR005503 Flagellar basal body-associated protein FliL AL539_19655 IPR022732 Peptidase S54, GlpG peptidase, N-terminal AL539_19655 IPR022764 Peptidase S54, rhomboid domain AL539_19655 IPR023662 Rhomboid protease GlpG AL539_19655 IPR035952 AL539_19655 AL539_19655 IPR038236 AL539_19655 AL539_19660 IPR001763 Rhodanese-like domain AL539_19660 IPR023695 Thiosulfate sulfurtransferase, bacterial AL539_19660 IPR036873 AL539_19660 AL539_19670 IPR000943 RNA polymerase sigma-70 AL539_19670 IPR007627 RNA polymerase sigma-70 region 2 AL539_19670 IPR007630 RNA polymerase sigma-70 region 4 AL539_19670 IPR009042 RNA polymerase sigma-70 region 1.2 AL539_19670 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria AL539_19670 IPR013324 RNA polymerase sigma factor, region 3/4 AL539_19670 IPR013325 RNA polymerase sigma factor, region 2 AL539_19670 IPR014284 RNA polymerase sigma-70 like domain AL539_19675 IPR004513 ABC transporter, cell division protein FtsX AL539_19680 IPR003439 ABC transporter-like AL539_19680 IPR003593 AAA+ ATPase domain AL539_19680 IPR005286 Cell division protein FtsE, ATP-binding AL539_19680 IPR017871 ABC transporter, conserved site AL539_19680 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_19685 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain AL539_19685 IPR003593 AAA+ ATPase domain AL539_19685 IPR004390 Signal-recognition particle receptor FtsY AL539_19685 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle AL539_19685 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_19685 IPR036225 AL539_19685 AL539_19690 IPR004398 RNA methyltransferase, RsmD AL539_19690 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like AL539_19695 IPR009525 Protein of unknown function DUF1145 AL539_19700 IPR002771 Multiple antibiotic resistance (MarC)-related AL539_19705 IPR019620 Putative metal-binding protein AL539_19710 IPR012506 YhhN-like AL539_19720 IPR025285 Domain of unknown function DUF4145 AL539_19725 IPR019635 Protein of unknown function DUF2500 AL539_19730 IPR002656 Acyltransferase 3 AL539_19735 IPR011701 Major facilitator superfamily AL539_19735 IPR036259 AL539_19735 AL539_19740 IPR016130 Protein-tyrosine phosphatase, active site AL539_19740 IPR022778 CDKN3 domain AL539_19740 IPR029021 Protein-tyrosine phosphatase-like AL539_19745 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I AL539_19745 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain AL539_19745 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain AL539_19745 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site AL539_19745 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family AL539_19745 IPR036291 AL539_19745 AL539_19750 IPR001845 HTH ArsR-type DNA-binding domain AL539_19750 IPR018334 ArsR-type transcription regulator, HTH motif AL539_19750 IPR036388 AL539_19750 AL539_19750 IPR036390 AL539_19750 AL539_19755 IPR001633 EAL domain AL539_19755 IPR013976 Metal-dependent hydrolase HDOD AL539_19755 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing AL539_19755 IPR035919 AL539_19755 AL539_19760 IPR001123 Lysine-type exporter protein (LYSE/YGGA) AL539_19765 IPR022742 Putative lysophospholipase AL539_19765 IPR029058 Alpha/Beta hydrolase fold AL539_19770 IPR000150 Cof protein AL539_19770 IPR006379 HAD-superfamily hydrolase, subfamily IIB AL539_19770 IPR023214 HAD-like domain AL539_19770 IPR036412 AL539_19770 AL539_19775 IPR002740 EVE domain AL539_19775 IPR015947 PUA-like domain AL539_19780 IPR014540 Uncharacterised conserved protein UCP028175 AL539_19785 IPR005636 DTW AL539_19790 IPR000160 GGDEF domain AL539_19790 IPR001633 EAL domain AL539_19790 IPR013702 FIST domain, N-terminal AL539_19790 IPR019494 FIST C domain AL539_19790 IPR029787 Nucleotide cyclase AL539_19790 IPR035919 AL539_19790 AL539_19795 IPR006439 HAD hydrolase, subfamily IA AL539_19795 IPR023214 HAD-like domain AL539_19795 IPR036412 AL539_19795 AL539_19800 IPR002104 Integrase, catalytic AL539_19800 IPR004107 Integrase, SAM-like, N-terminal AL539_19800 IPR010998 Integrase, Lambda-type, N-terminal AL539_19800 IPR011010 DNA breaking-rejoining enzyme, catalytic core AL539_19800 IPR011931 Tyrosine recombinase XerC AL539_19800 IPR013762 Integrase-like, catalytic core AL539_19800 IPR023009 Tyrosine recombinase XerC/XerD AL539_19805 IPR007435 Protein of unknown function DUF484 AL539_19805 IPR029016 GAF domain-like AL539_19810 IPR001653 Diaminopimelate epimerase, DapF AL539_19810 IPR018510 Diaminopimelate epimerase, active site AL539_19815 IPR000183 Ornithine/DAP/Arg decarboxylase AL539_19815 IPR002986 Diaminopimelate decarboxylase, LysA AL539_19815 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal AL539_19815 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal AL539_19815 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal AL539_19815 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site AL539_19815 IPR029066 PLP-binding barrel AL539_19825 IPR002908 Frataxin/CyaY AL539_19825 IPR020895 Frataxin conserved site AL539_19825 IPR036524 AL539_19825 AL539_19830 IPR000274 Adenylate cyclase, class-I AL539_19830 IPR024685 Adenylate cyclase class-I, N-terminal domain AL539_19835 IPR000860 Tetrapyrrole biosynthesis, hydroxymethylbilane synthase AL539_19835 IPR022417 Porphobilinogen deaminase, N-terminal AL539_19835 IPR022418 Porphobilinogen deaminase, C-terminal AL539_19835 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site AL539_19835 IPR036803 AL539_19835 AL539_19840 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase AL539_19840 IPR036108 AL539_19840 AL539_19845 IPR007470 HemX AL539_19850 IPR005254 Heme biosynthesis-associated TPR protein AL539_19850 IPR010817 HemY, N-terminal AL539_19850 IPR011990 Tetratricopeptide-like helical domain AL539_19850 IPR019734 Tetratricopeptide repeat AL539_19890 IPR001221 Phenol hydroxylase reductase AL539_19890 IPR001433 Oxidoreductase FAD/NAD(P)-binding AL539_19890 IPR017938 Riboflavin synthase-like beta-barrel AL539_19890 IPR039261 AL539_19890 AL539_19895 IPR001041 2Fe-2S ferredoxin-type domain AL539_19895 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site AL539_19895 IPR012675 Beta-grasp domain AL539_19895 IPR036010 AL539_19895 AL539_19900 IPR002830 UbiD decarboxylyase family AL539_19910 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain AL539_19910 IPR003593 AAA+ ATPase domain AL539_19910 IPR004665 Transcription termination factor Rho AL539_19910 IPR011112 Rho termination factor, N-terminal AL539_19910 IPR011113 Rho termination factor, RNA-binding AL539_19910 IPR011129 Cold shock protein AL539_19910 IPR012340 Nucleic acid-binding, OB-fold AL539_19910 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_19910 IPR036269 AL539_19910 AL539_19915 IPR005746 Thioredoxin AL539_19915 IPR013766 Thioredoxin domain AL539_19915 IPR017937 Thioredoxin, conserved site AL539_19915 IPR036249 AL539_19915 AL539_19920 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site AL539_19920 IPR001650 Helicase, C-terminal AL539_19920 IPR011545 DEAD/DEAH box helicase domain AL539_19920 IPR014001 Helicase, superfamily 1/2, ATP-binding domain AL539_19920 IPR023554 RNA helicase, ATP-dependent, RhlB-type AL539_19920 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_19925 IPR003695 Ppx/GppA phosphatase AL539_19925 IPR023709 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase AL539_19925 IPR030673 AL539_19925 AL539_19930 IPR000683 Oxidoreductase, N-terminal AL539_19930 IPR029903 AL539_19930 AL539_19930 IPR036291 AL539_19930 AL539_19935 IPR003744 Protein of unknown function DUF165 AL539_19940 IPR022080 Protein of unknown function DUF3630 AL539_19945 IPR001650 Helicase, C-terminal AL539_19945 IPR002121 HRDC domain AL539_19945 IPR004589 DNA helicase, ATP-dependent, RecQ type AL539_19945 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial AL539_19945 IPR010997 HRDC-like AL539_19945 IPR011545 DEAD/DEAH box helicase domain AL539_19945 IPR014001 Helicase, superfamily 1/2, ATP-binding domain AL539_19945 IPR018982 RQC domain AL539_19945 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_19945 IPR032284 AL539_19945 AL539_19945 IPR036388 AL539_19945 AL539_19950 IPR000620 Drug/metabolite transporter AL539_19950 IPR004626 RarD protein AL539_19955 IPR003313 AraC-type arabinose-binding/dimerisation domain AL539_19955 IPR009057 Homeodomain-like AL539_19955 IPR018060 DNA binding HTH domain, AraC-type AL539_19955 IPR020449 Transcription regulator HTH, AraC- type AL539_19955 IPR037923 AL539_19955 AL539_19960 IPR001123 Lysine-type exporter protein (LYSE/YGGA) AL539_19965 IPR000101 Gamma-glutamyltranspeptidase AL539_19965 IPR029055 Nucleophile aminohydrolases, N-terminal AL539_19975 IPR005753 DNA helicase, ATP-dependent, UvrD type AL539_19975 IPR013986 DExx box DNA helicase domain AL539_19975 IPR014017 DNA helicase, UvrD-like, C-terminal AL539_19975 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_19975 IPR034739 AL539_19975 AL539_19980 IPR018740 Protein of unknown function DUF2282, integral membrane AL539_19985 IPR007801 Uncharacterised protein family UPF0276 AL539_19985 IPR036237 AL539_19985 AL539_19990 IPR018640 Protein of unknown function DUF2063 AL539_19995 IPR032808 AL539_19995 AL539_20005 IPR004812 Drug resistance transporter Bcr/CmlA subfamily AL539_20005 IPR005829 Sugar transporter, conserved site AL539_20005 IPR011701 Major facilitator superfamily AL539_20005 IPR036259 AL539_20005 AL539_20010 IPR000847 Transcription regulator HTH, LysR AL539_20010 IPR005119 LysR, substrate-binding AL539_20010 IPR036388 AL539_20010 AL539_20010 IPR036390 AL539_20010 AL539_20015 IPR000587 Creatinase, N-terminal AL539_20015 IPR000994 Peptidase M24, structural domain AL539_20015 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal AL539_20015 IPR032416 AL539_20015 AL539_20015 IPR036005 AL539_20015 AL539_20020 IPR007197 Radical SAM AL539_20020 IPR010722 Biotin and thiamin synthesis-associated domain AL539_20020 IPR012726 Thiazole biosynthesis ThiH AL539_20020 IPR013785 Aldolase-type TIM barrel AL539_20025 IPR008867 Thiazole biosynthesis AL539_20025 IPR013785 Aldolase-type TIM barrel AL539_20025 IPR033983 AL539_20025 AL539_20030 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 AL539_20030 IPR010035 ThiS, thiamine-biosynthesis AL539_20030 IPR012675 Beta-grasp domain AL539_20030 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp AL539_20035 IPR000594 UBA/THIF-type NAD/FAD binding fold AL539_20035 IPR035985 AL539_20035 AL539_20040 IPR013785 Aldolase-type TIM barrel AL539_20040 IPR022998 Thiamin phosphate synthase superfamily AL539_20040 IPR036206 AL539_20040 AL539_20045 IPR002817 Thiamine biosynthesis protein ThiC AL539_20045 IPR025747 ThiC-associated domain AL539_20045 IPR037509 AL539_20045 AL539_20045 IPR038521 AL539_20045 AL539_20050 IPR003691 Putative fluoride ion transporter CrcB AL539_20055 IPR001117 Multicopper oxidase, type 1 AL539_20055 IPR002355 Multicopper oxidase, copper-binding site AL539_20055 IPR008972 Cupredoxin AL539_20055 IPR011706 Multicopper oxidase, type 2 AL539_20055 IPR011707 Multicopper oxidase, type 3 AL539_20055 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AL539_20070 IPR024997 Protein of unknown function DUF3892 AL539_20080 IPR004868 DNA-directed DNA polymerase, family B, mitochondria/virus AL539_20105 IPR026881 WYL domain AL539_20110 IPR021248 Protein of unknown function DUF2787 AL539_20125 IPR002104 Integrase, catalytic AL539_20125 IPR011010 DNA breaking-rejoining enzyme, catalytic core AL539_20125 IPR013762 Integrase-like, catalytic core AL539_20125 IPR025166 Domain of unknown function DUF4102 AL539_20125 IPR038488 AL539_20125 AL539_20185 IPR001451 Bacterial transferase hexapeptide repeat AL539_20185 IPR011004 Trimeric LpxA-like AL539_20190 IPR009962 Protein of unknown function DUF1488 AL539_20190 IPR036692 AL539_20190 AL539_20195 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase AL539_20195 IPR011342 Shikimate dehydrogenase AL539_20195 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal AL539_20195 IPR022893 Shikimate, quinate/shikimate dehydrogenase AL539_20195 IPR036291 AL539_20195 AL539_20200 IPR001260 Coproporphyrinogen III oxidase, aerobic AL539_20200 IPR018375 Coproporphyrinogen III oxidase, conserved site AL539_20200 IPR036406 AL539_20200 AL539_20205 IPR006070 YrdC-like domain AL539_20205 IPR017945 DHBP synthase RibB-like alpha/beta domain AL539_20205 IPR023535 Threonylcarbamoyl-AMP synthase AL539_20210 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain AL539_20210 IPR024694 N5-carboxyaminoimidazole ribonucleotide mutase PurE AL539_20210 IPR033747 AL539_20210 AL539_20210 IPR035893 AL539_20210 AL539_20215 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type AL539_20215 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit AL539_20215 IPR011054 Rudiment single hybrid motif AL539_20215 IPR013815 ATP-grasp fold, subdomain 1 AL539_20215 IPR016185 Pre-ATP-grasp domain AL539_20220 IPR013498 DNA topoisomerase, type IA, zn finger AL539_20225 IPR007456 Protein of unknown function DUF494 AL539_20230 IPR003488 DNA recombination-mediator protein A AL539_20230 IPR036388 AL539_20230 AL539_20235 IPR018392 LysM domain AL539_20235 IPR036779 AL539_20235 AL539_20240 IPR023635 Peptide deformylase AL539_20240 IPR036821 AL539_20240 AL539_20245 IPR001555 Phosphoribosylglycinamide formyltransferase, active site AL539_20245 IPR002376 Formyl transferase, N-terminal AL539_20245 IPR005793 Formyl transferase, C-terminal AL539_20245 IPR005794 Methionyl-tRNA formyltransferase AL539_20245 IPR011034 Formyl transferase, C-terminal-like AL539_20245 IPR036477 AL539_20245 AL539_20245 IPR037022 AL539_20245 AL539_20250 IPR001678 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p AL539_20250 IPR004573 rRNA small subunit methyltransferase B AL539_20250 IPR006027 NusB/RsmB/TIM44 AL539_20250 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site AL539_20250 IPR023267 RNA (C5-cytosine) methyltransferase AL539_20250 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like AL539_20250 IPR035926 AL539_20250 AL539_20255 IPR003148 Regulator of K+ conductance, N-terminal AL539_20255 IPR006036 Potassium uptake protein TrkA AL539_20255 IPR006037 Regulator of K+ conductance, C-terminal AL539_20255 IPR036291 AL539_20255 AL539_20255 IPR036721 AL539_20255 AL539_20260 IPR003445 Cation transporter AL539_20260 IPR004772 Potassium uptake protein TrkH family AL539_20265 IPR021501 Protein of unknown function DUF3157 AL539_20270 IPR004254 Hly-III-related AL539_20270 IPR005744 HylII AL539_20275 IPR009776 Sporulation stage 0, protein M AL539_20285 IPR009383 Protein of unknown function DUF1040 AL539_20285 IPR038134 AL539_20285 AL539_20290 IPR013783 Immunoglobulin-like fold AL539_20290 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG AL539_20290 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL539_20290 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL539_20290 IPR032879 AL539_20290 AL539_20295 IPR002575 Aminoglycoside phosphotransferase AL539_20295 IPR011009 Protein kinase-like domain AL539_20295 IPR032882 AL539_20295 AL539_20300 IPR001853 DSBA-like thioredoxin domain AL539_20300 IPR017937 Thioredoxin, conserved site AL539_20300 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL AL539_20300 IPR036249 AL539_20300 AL539_20305 IPR002123 Phospholipid/glycerol acyltransferase AL539_20310 IPR016896 Protein of unknown function DUF2860 AL539_20315 IPR000523 Magnesium chelatase, ChlI subunit AL539_20315 IPR001208 Mini-chromosome maintenance, DNA-dependent ATPase AL539_20315 IPR003593 AAA+ ATPase domain AL539_20315 IPR004482 Mg chelatase-related protein AL539_20315 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AL539_20315 IPR020568 Ribosomal protein S5 domain 2-type fold AL539_20315 IPR025158 Mg chelatase-related protein, C-terminal domain AL539_20315 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_20320 IPR000399 TPP-binding enzyme, conserved site AL539_20320 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding AL539_20320 IPR012000 Thiamine pyrophosphate enzyme, central domain AL539_20320 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain AL539_20320 IPR012846 Acetolactate synthase, large subunit, biosynthetic AL539_20320 IPR029035 DHS-like NAD/FAD-binding domain AL539_20320 IPR029061 Thiamin diphosphate-binding fold AL539_20330 IPR001544 Aminotransferase, class IV AL539_20330 IPR005785 Branched-chain amino acid aminotransferase I AL539_20330 IPR018300 Aminotransferase, class IV, conserved site AL539_20330 IPR036038 AL539_20330 AL539_20335 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase AL539_20335 IPR004404 Dihydroxy-acid dehydratase AL539_20335 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site AL539_20335 IPR037237 AL539_20335 AL539_20340 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site AL539_20340 IPR001721 ACT-like domain AL539_20340 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AL539_20340 IPR005787 Threonine dehydratase, biosynthetic AL539_20340 IPR036052 AL539_20340 AL539_20340 IPR038110 AL539_20340 AL539_20345 IPR000847 Transcription regulator HTH, LysR AL539_20345 IPR005119 LysR, substrate-binding AL539_20345 IPR036388 AL539_20345 AL539_20345 IPR036390 AL539_20345 AL539_20350 IPR004812 Drug resistance transporter Bcr/CmlA subfamily AL539_20350 IPR011701 Major facilitator superfamily AL539_20350 IPR036259 AL539_20350 AL539_20355 IPR001638 Extracellular solute-binding protein, family 3 AL539_20355 IPR018313 Extracellular solute-binding protein, family 3, conserved site AL539_20360 IPR000515 MetI-like domain AL539_20360 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family AL539_20360 IPR035906 AL539_20360 AL539_20365 IPR001451 Bacterial transferase hexapeptide repeat AL539_20365 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase AL539_20365 IPR011004 Trimeric LpxA-like AL539_20365 IPR018357 Hexapeptide transferase, conserved site AL539_20365 IPR025877 MobA-like NTP transferase domain AL539_20365 IPR029044 Nucleotide-diphospho-sugar transferases AL539_20370 IPR001469 ATPase, F1 complex, delta/epsilon subunit AL539_20370 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal AL539_20370 IPR020547 ATPase, F1 complex, delta/epsilon subunit, C-terminal domain AL539_20370 IPR036771 AL539_20370 AL539_20370 IPR036794 AL539_20370 AL539_20375 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain AL539_20375 IPR003593 AAA+ ATPase domain AL539_20375 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain AL539_20375 IPR005722 ATPase, F1 complex, beta subunit AL539_20375 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site AL539_20375 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal AL539_20375 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_20375 IPR036121 AL539_20375 AL539_20380 IPR000131 ATPase, F1 complex, gamma subunit AL539_20380 IPR023632 ATPase, F1 complex, gamma subunit conserved site AL539_20380 IPR035968 AL539_20380 AL539_20385 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain AL539_20385 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal AL539_20385 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain AL539_20385 IPR005294 ATPase, F1 complex, alpha subunit AL539_20385 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site AL539_20385 IPR023366 ATP synthase subunit alpha-like domain AL539_20385 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_20385 IPR036121 AL539_20385 AL539_20385 IPR038376 AL539_20385 AL539_20390 IPR000711 ATPase, OSCP/delta subunit AL539_20390 IPR020781 ATPase, OSCP/delta subunit, conserved site AL539_20390 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain AL539_20395 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast AL539_20395 IPR005864 ATPase, F0 complex, subunit B, bacterial AL539_20395 IPR028987 F-type ATP synthase subunit B-like, membrane domain AL539_20400 IPR000454 ATPase, F0 complex, subunit C AL539_20400 IPR002379 V-ATPase proteolipid subunit C-like domain AL539_20400 IPR005953 ATPase, F0 complex, subunit C, bacterial/chloroplast AL539_20400 IPR020537 ATPase, F0 complex, subunit C, DCCD-binding site AL539_20400 IPR035921 AL539_20400 AL539_20400 IPR038662 AL539_20400 AL539_20405 IPR000568 ATPase, F0 complex, subunit A AL539_20405 IPR023011 ATPase, F0 complex, subunit A, active site AL539_20405 IPR035908 AL539_20405 AL539_20410 IPR005598 ATP synthase protein I AL539_20415 IPR003115 ParB/Sulfiredoxin AL539_20415 IPR004437 ParB/RepB/Spo0J partition protein family AL539_20415 IPR036086 AL539_20415 AL539_20420 IPR025669 AAA domain AL539_20420 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_20425 IPR003682 rRNA small subunit methyltransferase G AL539_20425 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like AL539_20430 IPR002218 Glucose-inhibited division protein A-related AL539_20430 IPR004416 Glucose-inhibited division protein A AL539_20430 IPR020595 Glucose-inhibited division protein A-related, conserved site AL539_20430 IPR026904 GidA associated domain 3 AL539_20430 IPR036188 AL539_20430 AL539_20440 IPR008254 Flavodoxin/nitric oxide synthase AL539_20440 IPR029039 Flavoprotein-like AL539_20445 IPR004520 tRNA modification GTPase MnmE AL539_20445 IPR005225 Small GTP-binding protein domain AL539_20445 IPR006073 GTP binding domain AL539_20445 IPR018948 GTP-binding protein TrmE, N-terminal AL539_20445 IPR025867 tRNA modification GTPase MnmE C-terminal domain AL539_20445 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 AL539_20445 IPR027368 tRNA modification GTPase MnmE domain 2 AL539_20445 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_20450 IPR001708 Membrane insertase OXA1/ALB3/YidC AL539_20450 IPR019998 Membrane insertase YidC AL539_20450 IPR028053 Membrane insertase YidC, N-terminal AL539_20450 IPR028055 Membrane insertase YidC/Oxa1, C-terminal AL539_20450 IPR038210 AL539_20450 AL539_20450 IPR038221 AL539_20450 AL539_20455 IPR002696 Putative membrane protein insertion efficiency factor AL539_20460 IPR000100 Ribonuclease P AL539_20460 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AL539_20460 IPR020539 Ribonuclease P, conserved site AL539_20460 IPR020568 Ribosomal protein S5 domain 2-type fold AL539_20465 IPR000271 Ribosomal protein L34 AL539_20465 IPR020939 Ribosomal protein L34, conserved site AL539_20470 IPR003439 ABC transporter-like AL539_20470 IPR003593 AAA+ ATPase domain AL539_20470 IPR017871 ABC transporter, conserved site AL539_20470 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_20470 IPR030679 AL539_20470 AL539_20475 IPR000515 MetI-like domain AL539_20475 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family AL539_20475 IPR035906 AL539_20475 AL539_20480 IPR001320 Ionotropic glutamate receptor AL539_20480 IPR001638 Extracellular solute-binding protein, family 3 AL539_20480 IPR018313 Extracellular solute-binding protein, family 3, conserved site AL539_20490 IPR001957 Chromosomal replication control, initiator DnaA AL539_20490 IPR003593 AAA+ ATPase domain AL539_20490 IPR010921 Trp repressor/replication initiator AL539_20490 IPR013159 Chromosomal replication initiator, DnaA C-terminal AL539_20490 IPR013317 Chromosomal replication control, initiator (DnaA)/regulator (Hda) AL539_20490 IPR018312 Chromosomal replication control, initiator DnaA, conserved site AL539_20490 IPR020591 Chromosomal replication control, initiator DnaA-like AL539_20490 IPR024633 DnaA N-terminal domain AL539_20490 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_20490 IPR038454 AL539_20490 AL539_20495 IPR001001 DNA polymerase III, beta chain AL539_20495 IPR022634 DNA polymerase III, beta chain, N-terminal AL539_20495 IPR022635 DNA polymerase III, beta chain, C-terminal AL539_20495 IPR022637 DNA polymerase III, beta chain, central AL539_20500 IPR001238 DNA-binding, RecF AL539_20500 IPR003395 RecF/RecN/SMC, N-terminal AL539_20500 IPR018078 DNA-binding, RecF, conserved site AL539_20500 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_20505 IPR000565 DNA topoisomerase, type IIA, subunit B AL539_20505 IPR001241 DNA topoisomerase, type IIA AL539_20505 IPR002288 DNA gyrase B subunit, C-terminal AL539_20505 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_20505 IPR006171 Toprim domain AL539_20505 IPR011557 DNA gyrase, subunit B AL539_20505 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 AL539_20505 IPR013759 DNA topoisomerase, type IIA, central domain AL539_20505 IPR013760 DNA topoisomerase, type IIA-like domain AL539_20505 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AL539_20505 IPR018522 DNA topoisomerase, type IIA, conserved site AL539_20505 IPR020568 Ribosomal protein S5 domain 2-type fold AL539_20505 IPR036890 AL539_20505 AL539_20515 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal AL539_20515 IPR023459 Transcription elongation factor GreA/GreB family AL539_20515 IPR036953 AL539_20515 AL539_20525 IPR002068 Alpha crystallin/Hsp20 domain AL539_20525 IPR008978 HSP20-like chaperone AL539_20530 IPR004839 Aminotransferase, class I/classII AL539_20530 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 AL539_20530 IPR015424 Pyridoxal phosphate-dependent transferase AL539_20535 IPR006047 Glycosyl hydrolase, family 13, catalytic domain AL539_20535 IPR014635 Alpha-amylase, MalS type AL539_20535 IPR017853 Glycoside hydrolase, superfamily AL539_20540 IPR008909 DALR anticodon binding AL539_20540 IPR015944 Glycine-tRNA ligase, beta subunit AL539_20545 IPR002310 Glycine-tRNA ligase, alpha subunit AL539_20550 IPR001727 Uncharacterised protein family UPF0016 AL539_20560 IPR001455 TusA-like domain AL539_20560 IPR022931 Sulphurtransferase TusA AL539_20560 IPR036868 AL539_20560 AL539_20570 IPR000847 Transcription regulator HTH, LysR AL539_20570 IPR005119 LysR, substrate-binding AL539_20570 IPR036388 AL539_20570 AL539_20570 IPR036390 AL539_20570 AL539_20575 IPR011032 GroES (chaperonin 10)-like AL539_20575 IPR013149 Alcohol dehydrogenase, C-terminal AL539_20575 IPR013154 Alcohol dehydrogenase GroES-like AL539_20575 IPR014188 Acrylyl-CoA reductase AcuI AL539_20575 IPR020843 Polyketide synthase, enoylreductase AL539_20575 IPR036291 AL539_20575 AL539_20580 IPR002155 Thiolase AL539_20580 IPR012805 Acetyl-CoA C-acyltransferase FadA AL539_20580 IPR016039 Thiolase-like AL539_20580 IPR020610 Thiolase, active site AL539_20580 IPR020613 Thiolase, conserved site AL539_20580 IPR020615 Thiolase, acyl-enzyme intermediate active site AL539_20580 IPR020616 Thiolase, N-terminal AL539_20580 IPR020617 Thiolase, C-terminal AL539_20585 IPR001753 Crotonase superfamily AL539_20585 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal AL539_20585 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding AL539_20585 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site AL539_20585 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like AL539_20585 IPR012799 Fatty oxidation complex, alpha subunit FadB AL539_20585 IPR029045 ClpP/crotonase-like domain AL539_20585 IPR036291 AL539_20585 AL539_20590 IPR001498 Impact, N-terminal AL539_20590 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal AL539_20590 IPR015796 Impact family, bacterial/archaeal AL539_20590 IPR020568 Ribosomal protein S5 domain 2-type fold AL539_20590 IPR035647 AL539_20590 AL539_20590 IPR036956 AL539_20590 AL539_20595 IPR003445 Cation transporter AL539_20595 IPR004772 Potassium uptake protein TrkH family AL539_20600 IPR026816 Flavodoxin domain AL539_20600 IPR029039 Flavoprotein-like AL539_20640 IPR000847 Transcription regulator HTH, LysR AL539_20640 IPR005119 LysR, substrate-binding AL539_20640 IPR036388 AL539_20640 AL539_20640 IPR036390 AL539_20640 AL539_20645 IPR000506 Acetohydroxy acid isomeroreductase C-terminal AL539_20645 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like AL539_20645 IPR013023 Acetohydroxy acid isomeroreductase AL539_20645 IPR013116 Acetohydroxy acid isomeroreductase, catalytic AL539_20645 IPR013328 Dehydrogenase, multihelical AL539_20645 IPR036291 AL539_20645 AL539_20650 IPR007475 Membrane fusogenic activity AL539_20655 IPR001036 Acriflavin resistance protein AL539_20655 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL539_20660 IPR006143 RND efflux pump, membrane fusion protein AL539_20660 IPR032317 AL539_20660 AL539_20665 IPR001647 DNA-binding HTH domain, TetR-type AL539_20665 IPR009057 Homeodomain-like AL539_20665 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AL539_20665 IPR032551 AL539_20665 AL539_20670 IPR005752 DNA helicase, ATP-dependent, RepA type AL539_20670 IPR013986 DExx box DNA helicase domain AL539_20670 IPR014017 DNA helicase, UvrD-like, C-terminal AL539_20670 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_20670 IPR034739 AL539_20670 AL539_20675 IPR002323 Cytochrome c, class IE AL539_20675 IPR009056 Cytochrome c-like domain AL539_20675 IPR036909 AL539_20675 AL539_20705 IPR006439 HAD hydrolase, subfamily IA AL539_20705 IPR023214 HAD-like domain AL539_20705 IPR036412 AL539_20705 AL539_20715 IPR003439 ABC transporter-like AL539_20715 IPR003593 AAA+ ATPase domain AL539_20715 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal AL539_20715 IPR017871 ABC transporter, conserved site AL539_20715 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_20720 IPR000914 Bacterial extracellular solute-binding protein, family 5 AL539_20720 IPR023765 Bacterial extracellular solute-binding protein, family 5, conserved site AL539_20720 IPR030678 AL539_20720 AL539_20725 IPR000515 MetI-like domain AL539_20725 IPR035906 AL539_20725 AL539_20730 IPR000515 MetI-like domain AL539_20730 IPR025966 Oligopeptide transport permease C-like, N-terminal domain AL539_20730 IPR035906 AL539_20730 AL539_20740 IPR007730 Sporulation-related domain AL539_20745 IPR000843 Transcription regulator HTH, LacI AL539_20745 IPR001761 Periplasmic binding protein/LacI sugar binding domain AL539_20745 IPR010982 Lambda repressor-like, DNA-binding domain AL539_20745 IPR028082 Periplasmic binding protein-like I AL539_20750 IPR000847 Transcription regulator HTH, LysR AL539_20750 IPR005119 LysR, substrate-binding AL539_20750 IPR036388 AL539_20750 AL539_20750 IPR036390 AL539_20750 AL539_20755 IPR000390 Small multidrug resistance protein family AL539_20760 IPR000390 Small multidrug resistance protein family AL539_20765 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase AL539_20765 IPR004786 6-phosphogluconate dehydratase AL539_20765 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site AL539_20765 IPR037237 AL539_20765 AL539_20770 IPR006001 Carbohydrate kinase, thermoresistant glucokinase AL539_20770 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_20770 IPR031322 AL539_20770 AL539_20775 IPR003474 Gluconate transporter AL539_20780 IPR000887 KDPG/KHG aldolase AL539_20780 IPR013785 Aldolase-type TIM barrel AL539_20780 IPR031337 AL539_20780 AL539_20780 IPR031338 AL539_20780 AL539_20785 IPR000845 Nucleoside phosphorylase domain AL539_20785 IPR010943 Xanthosine phosphorylase AL539_20785 IPR011268 Purine nucleoside phosphorylase AL539_20785 IPR018099 Purine phosphorylase, family 2, conserved site AL539_20785 IPR035994 AL539_20785 AL539_20790 IPR000847 Transcription regulator HTH, LysR AL539_20790 IPR005119 LysR, substrate-binding AL539_20790 IPR036388 AL539_20790 AL539_20790 IPR036390 AL539_20790 AL539_20795 IPR001100 AL539_20795 AL539_20795 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AL539_20795 IPR006322 Glutathione reductase, eukaryote/bacterial AL539_20795 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site AL539_20795 IPR016156 FAD/NAD-linked reductase, dimerisation domain AL539_20795 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain AL539_20795 IPR036188 AL539_20795 AL539_20800 IPR007473 Ribosomal RNA large subunit methyltransferase J AL539_20800 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like AL539_20805 IPR001567 Peptidase M3A/M3B AL539_20805 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 AL539_20810 IPR000485 AsnC-type HTH domain AL539_20810 IPR011008 Dimeric alpha-beta barrel AL539_20810 IPR019887 Transcription regulator AsnC-type, C-terminal AL539_20810 IPR019888 Transcription regulator AsnC-type AL539_20810 IPR036388 AL539_20810 AL539_20810 IPR036390 AL539_20810 AL539_20815 IPR000014 PAS domain AL539_20815 IPR000160 GGDEF domain AL539_20815 IPR001610 PAC motif AL539_20815 IPR001633 EAL domain AL539_20815 IPR029787 Nucleotide cyclase AL539_20815 IPR035919 AL539_20815 AL539_20815 IPR035965 AL539_20815 AL539_20820 IPR007536 Ribosomal RNA small subunit methyltransferase J AL539_20820 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like AL539_20830 IPR000620 Drug/metabolite transporter AL539_20830 IPR004779 Carboxylate/Amino Acid/Amine Transporter AL539_20835 IPR006015 Universal stress protein A AL539_20835 IPR006016 UspA AL539_20835 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL539_20840 IPR008331 Ferritin/DPS protein domain AL539_20840 IPR009078 Ferritin-like superfamily AL539_20840 IPR012347 Ferritin-related AL539_20845 IPR019598 Universal stress protein B AL539_20850 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like AL539_20850 IPR023166 HI0933 insert-like domain AL539_20850 IPR036188 AL539_20850 AL539_20855 IPR002078 RNA polymerase sigma factor 54 interaction domain AL539_20855 IPR002197 DNA binding HTH domain, Fis-type AL539_20855 IPR003593 AAA+ ATPase domain AL539_20855 IPR009057 Homeodomain-like AL539_20855 IPR011006 CheY-like superfamily AL539_20855 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AL539_20855 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AL539_20855 IPR025944 Sigma-54 interaction domain, conserved site AL539_20855 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_20860 IPR007055 BON domain AL539_20860 IPR014004 Transport-associated and nodulation domain, bacteria AL539_20865 IPR009760 Protein of unknown function DUF1328 AL539_20875 IPR012312 Haemerythrin/HHE cation-binding motif AL539_20880 IPR000340 Dual specificity phosphatase, catalytic domain AL539_20880 IPR001206 Diacylglycerol kinase, catalytic domain AL539_20880 IPR003595 Protein-tyrosine phosphatase, catalytic AL539_20880 IPR016064 ATP-NAD kinase-like domain AL539_20880 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 AL539_20880 IPR020422 Dual specificity phosphatase, subgroup, catalytic domain AL539_20880 IPR029021 Protein-tyrosine phosphatase-like AL539_20890 IPR012347 Ferritin-related AL539_20890 IPR019052 Domain of unknown function DUF2383 AL539_20910 IPR002549 Uncharacterised protein family UPF0118 AL539_20915 IPR000014 PAS domain AL539_20915 IPR000160 GGDEF domain AL539_20915 IPR001610 PAC motif AL539_20915 IPR001633 EAL domain AL539_20915 IPR013656 PAS fold-4 AL539_20915 IPR029787 Nucleotide cyclase AL539_20915 IPR035919 AL539_20915 AL539_20915 IPR035965 AL539_20915 AL539_20920 IPR000620 Drug/metabolite transporter AL539_20925 IPR003798 DNA recombination RmuC AL539_20930 IPR004033 UbiE/COQ5 methyltransferase AL539_20930 IPR023576 UbiE/COQ5 methyltransferase, conserved site AL539_20930 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like AL539_20935 IPR003033 SCP2 sterol-binding domain AL539_20935 IPR036527 AL539_20935 AL539_20940 IPR004147 UbiB domain AL539_20940 IPR010232 Probable protein kinase UbiB AL539_20940 IPR011009 Protein kinase-like domain AL539_20945 IPR003369 Sec-independent protein translocase protein TatA/B/E AL539_20945 IPR006312 Sec-independent protein translocase protein TatA/E AL539_20950 IPR003369 Sec-independent protein translocase protein TatA/B/E AL539_20950 IPR018448 Twin-arginine translocation protein TatB AL539_20955 IPR002033 Sec-independent periplasmic protein translocase TatC AL539_20955 IPR019820 Sec-independent periplasmic protein translocase, conserved site AL539_20970 IPR001130 TatD family AL539_20970 IPR015991 Uncharacterised deoxyribonuclease TatD-type AL539_20970 IPR032466 AL539_20970 AL539_20980 IPR001731 Porphobilinogen synthase AL539_20980 IPR013785 Aldolase-type TIM barrel AL539_20980 IPR030656 AL539_20980 AL539_20985 IPR000182 GNAT domain AL539_20985 IPR016181 Acyl-CoA N-acyltransferase AL539_20995 IPR001098 DNA-directed DNA polymerase, family A, palm domain AL539_20995 IPR002298 DNA polymerase A AL539_20995 IPR002421 5'-3' exonuclease, N-terminal AL539_20995 IPR002562 3'-5' exonuclease domain AL539_20995 IPR008918 Helix-hairpin-helix motif, class 2 AL539_20995 IPR012337 Ribonuclease H-like domain AL539_20995 IPR018320 DNA polymerase 1 AL539_20995 IPR019760 DNA-directed DNA polymerase, family A, conserved site AL539_20995 IPR020045 5'-3' exonuclease, C-terminal domain AL539_20995 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal AL539_20995 IPR029060 PIN domain-like AL539_20995 IPR036279 AL539_20995 AL539_20995 IPR036397 AL539_20995 AL539_21000 IPR006073 GTP binding domain AL539_21000 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC AL539_21000 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_21005 IPR009056 Cytochrome c-like domain AL539_21005 IPR024167 Cytochrome c4 AL539_21005 IPR036909 AL539_21005 AL539_21015 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like AL539_21020 IPR007336 Der GTPase activator AL539_21025 IPR019617 Domain of unknown function DUF2489 AL539_21030 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN AL539_21030 IPR006638 Elongator protein 3/MiaB/NifB AL539_21030 IPR007197 Radical SAM AL539_21030 IPR010723 HemN, C-terminal domain AL539_21030 IPR023404 Radical SAM, alpha/beta horseshoe AL539_21035 IPR001365 Adenosine/AMP deaminase domain AL539_21035 IPR006330 Adenosine/adenine deaminase AL539_21035 IPR028893 Adenosine deaminase AL539_21035 IPR032466 AL539_21035 AL539_21040 IPR000160 GGDEF domain AL539_21040 IPR001633 EAL domain AL539_21040 IPR003660 HAMP linker domain AL539_21040 IPR029787 Nucleotide cyclase AL539_21040 IPR033479 AL539_21040 AL539_21040 IPR035919 AL539_21040 AL539_21045 IPR001789 Signal transduction response regulator, receiver domain AL539_21045 IPR002078 RNA polymerase sigma factor 54 interaction domain AL539_21045 IPR002197 DNA binding HTH domain, Fis-type AL539_21045 IPR003593 AAA+ ATPase domain AL539_21045 IPR009057 Homeodomain-like AL539_21045 IPR010114 Signal transduction response regulator, nitrogen regulation NR(I) AL539_21045 IPR011006 CheY-like superfamily AL539_21045 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AL539_21045 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AL539_21045 IPR025944 Sigma-54 interaction domain, conserved site AL539_21045 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_21050 IPR000014 PAS domain AL539_21050 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_21050 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain AL539_21050 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AL539_21050 IPR013767 PAS fold AL539_21050 IPR035965 AL539_21050 AL539_21050 IPR036097 AL539_21050 AL539_21050 IPR036890 AL539_21050 AL539_21055 IPR025392 Domain of unknown function DUF4124 AL539_21060 IPR001637 Glutamine synthetase class-I, adenylation site AL539_21060 IPR004809 Glutamine synthetase type I AL539_21060 IPR008146 Glutamine synthetase, catalytic domain AL539_21060 IPR008147 Glutamine synthetase, beta-Grasp AL539_21060 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain AL539_21060 IPR027302 Glutamine synthetase, N-terminal conserved site AL539_21060 IPR027303 Glutamine synthetase, glycine-rich site AL539_21060 IPR036651 AL539_21060 AL539_21065 IPR000640 Translation elongation factor EFG, V domain AL539_21065 IPR000795 Elongation factor, GTP-binding domain AL539_21065 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 AL539_21065 IPR005225 Small GTP-binding protein domain AL539_21065 IPR006298 GTP-binding protein TypA AL539_21065 IPR009000 Translation protein, beta-barrel domain AL539_21065 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_21065 IPR031157 AL539_21065 AL539_21065 IPR035647 AL539_21065 AL539_21070 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_21070 IPR038727 AL539_21070 AL539_21075 IPR021342 Protein of unknown function DUF2959 AL539_21080 IPR017039 Virulence factor BrkB AL539_21080 IPR023679 Uncharacterised protein family UPF0761, bacterial AL539_21085 IPR003732 D-tyrosyl-tRNA(Tyr) deacylase AL539_21085 IPR023509 D-Tyr tRNAtyr deacylase-like domain AL539_21090 IPR000182 GNAT domain AL539_21090 IPR012660 Thioesterase, putative AL539_21090 IPR016181 Acyl-CoA N-acyltransferase AL539_21090 IPR029069 HotDog domain AL539_21095 IPR007844 AsmA AL539_21100 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising AL539_21100 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal AL539_21100 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal AL539_21100 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site AL539_21105 IPR000397 Heat shock protein Hsp33 AL539_21105 IPR016153 Heat shock protein Hsp33, N-terminal AL539_21105 IPR016154 Heat shock protein Hsp33, C-terminal AL539_21105 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain AL539_21110 IPR002942 RNA-binding S4 domain AL539_21110 IPR025708 Heat shock protein 15 AL539_21110 IPR036986 AL539_21110 AL539_21115 IPR001639 Type II secretion system protein C AL539_21115 IPR024961 AL539_21115 AL539_21115 IPR036034 AL539_21115 AL539_21120 IPR001775 GspD/PilQ family AL539_21120 IPR004845 Type II secretion system GspD, conserved site AL539_21120 IPR004846 Type II/III secretion system AL539_21120 IPR005644 NolW-like AL539_21120 IPR013356 Type II secretion system GspD AL539_21120 IPR038591 AL539_21120 AL539_21125 IPR001482 Type II secretion system protein E AL539_21125 IPR003593 AAA+ ATPase domain AL539_21125 IPR013369 Type II secretion system GspE AL539_21125 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_21125 IPR037257 AL539_21125 AL539_21130 IPR001992 Type II secretion system conserved site AL539_21130 IPR003004 GspF/PilC family AL539_21130 IPR011850 General secretion pathway protein F AL539_21130 IPR018076 Type II secretion system F domain AL539_21135 IPR000983 Bacterial general secretion pathway protein G-type pilin AL539_21135 IPR010054 General secretion pathway protein G AL539_21135 IPR012902 Prokaryotic N-terminal methylation site AL539_21135 IPR013545 Type II secretion system protein G AL539_21140 IPR002416 Type II secretion system protein H AL539_21140 IPR012902 Prokaryotic N-terminal methylation site AL539_21140 IPR022346 General secretion pathway, GspH AL539_21145 IPR003413 Type II secretion system protein I domain AL539_21145 IPR010052 Type II secretion system protein I AL539_21150 IPR010055 Type II secretion system protein J AL539_21150 IPR012902 Prokaryotic N-terminal methylation site AL539_21155 IPR005628 General secretion pathway protein K AL539_21155 IPR038072 AL539_21155 AL539_21160 IPR007812 Type II secretion system protein L AL539_21160 IPR024230 GspL, cytoplasmic actin-ATPase-like domain AL539_21160 IPR025691 GspL periplasmic domain AL539_21165 IPR007690 Type II secretion system, protein M AL539_21165 IPR023229 Type II secretion system protein M, periplasmic domain AL539_21170 IPR022792 Type II secretion system, protein N AL539_21175 IPR000760 Inositol monophosphatase AL539_21175 IPR006240 3(2),5 -bisphosphate nucleotidase, bacterial AL539_21180 IPR000086 NUDIX hydrolase domain AL539_21180 IPR015797 NUDIX hydrolase domain-like AL539_21180 IPR020084 NUDIX hydrolase, conserved site AL539_21185 IPR000361 FeS cluster biogenesis AL539_21185 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal AL539_21185 IPR017726 Fe/S biogenesis protein NfuA AL539_21185 IPR034904 AL539_21185 AL539_21185 IPR035903 AL539_21185 AL539_21190 IPR000836 Phosphoribosyltransferase domain AL539_21190 IPR029057 Phosphoribosyltransferase-like AL539_21195 IPR000073 Alpha/beta hydrolase fold-1 AL539_21195 IPR010076 Pimelyl-[acyl-carrier protein] methyl ester esterase AL539_21195 IPR029058 Alpha/Beta hydrolase fold AL539_21205 IPR003029 Ribosomal protein S1, RNA-binding domain AL539_21205 IPR006641 YqgF/RNase H-like domain AL539_21205 IPR010994 RuvA domain 2-like AL539_21205 IPR012337 Ribonuclease H-like domain AL539_21205 IPR012340 Nucleic acid-binding, OB-fold AL539_21205 IPR018974 Tex-like protein, N-terminal AL539_21205 IPR022967 RNA-binding domain, S1 AL539_21205 IPR023319 Tex-like protein, HTH domain AL539_21205 IPR023323 Tex-like domain AL539_21205 IPR032639 AL539_21205 AL539_21205 IPR037027 AL539_21205 AL539_21210 IPR021109 Aspartic peptidase domain AL539_21215 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal AL539_21215 IPR006358 Transcription elongation factor GreB AL539_21215 IPR018151 Transcription elongation factor, GreA/GreB, conserved site AL539_21215 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal AL539_21215 IPR023459 Transcription elongation factor GreA/GreB family AL539_21215 IPR028624 Transcription elongation factor GreA/GreB AL539_21215 IPR036805 AL539_21215 AL539_21215 IPR036953 AL539_21215 AL539_21220 IPR009468 Protein of unknown function DUF1090 AL539_21225 IPR001789 Signal transduction response regulator, receiver domain AL539_21225 IPR001867 Signal transduction response regulator, C-terminal AL539_21225 IPR011006 CheY-like superfamily AL539_21225 IPR016032 Signal transduction response regulator, C-terminal effector AL539_21225 IPR036388 AL539_21225 AL539_21230 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_21230 IPR003660 HAMP linker domain AL539_21230 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain AL539_21230 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AL539_21230 IPR036097 AL539_21230 AL539_21230 IPR036890 AL539_21230 AL539_21235 IPR006042 Xanthine/uracil permease AL539_21235 IPR006043 Xanthine/uracil/vitamin C permease AL539_21235 IPR017588 Xanthine permease AL539_21240 IPR001650 Helicase, C-terminal AL539_21240 IPR004609 ATP-dependent DNA helicase RecG AL539_21240 IPR011545 DEAD/DEAH box helicase domain AL539_21240 IPR012340 Nucleic acid-binding, OB-fold AL539_21240 IPR014001 Helicase, superfamily 1/2, ATP-binding domain AL539_21240 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_21240 IPR033454 AL539_21240 AL539_21245 IPR001537 tRNA/rRNA methyltransferase, SpoU type AL539_21245 IPR022724 RNA methyltransferase, SpoU/TrmH type, C-terminal AL539_21245 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AL539_21245 IPR029028 Alpha/beta knot methyltransferases AL539_21245 IPR033671 AL539_21245 AL539_21250 IPR002912 ACT domain AL539_21250 IPR003607 HD/PDEase domain AL539_21250 IPR004095 TGS AL539_21250 IPR004811 RelA/SpoT family AL539_21250 IPR007685 RelA/SpoT AL539_21250 IPR012675 Beta-grasp domain AL539_21250 IPR012676 TGS-like AL539_21255 IPR003716 DNA-directed RNA polymerase, omega subunit AL539_21255 IPR006110 RNA polymerase, subunit omega/K/RPB6 AL539_21255 IPR012293 RNA polymerase subunit, RPB6/omega AL539_21255 IPR036161 AL539_21255 AL539_21260 IPR008145 Guanylate kinase/L-type calcium channel beta subunit AL539_21260 IPR017665 Guanylate kinase AL539_21260 IPR020590 Guanylate kinase, conserved site AL539_21260 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_21270 IPR011990 Tetratricopeptide-like helical domain AL539_21270 IPR019734 Tetratricopeptide repeat AL539_21275 IPR006260 TonB, C-terminal AL539_21275 IPR037682 AL539_21275 AL539_21280 IPR003400 Biopolymer transport protein ExbD/TolR AL539_21285 IPR002898 MotA/TolQ/ExbB proton channel AL539_21290 IPR002898 MotA/TolQ/ExbB proton channel AL539_21290 IPR017270 Outer membrane stability protein, TolR AL539_21295 IPR016866 Uncharacterised conserved protein UCP028069 AL539_21300 IPR000531 TonB-dependent receptor, beta-barrel AL539_21300 IPR012910 TonB-dependent receptor, plug AL539_21300 IPR037066 AL539_21300 AL539_21310 IPR000515 MetI-like domain AL539_21310 IPR035906 AL539_21310 AL539_21315 IPR000515 MetI-like domain AL539_21315 IPR035906 AL539_21315 AL539_21320 IPR000914 Bacterial extracellular solute-binding protein, family 5 AL539_21320 IPR030678 AL539_21320 AL539_21325 IPR003439 ABC transporter-like AL539_21325 IPR003593 AAA+ ATPase domain AL539_21325 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal AL539_21325 IPR017871 ABC transporter, conserved site AL539_21325 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_21330 IPR003439 ABC transporter-like AL539_21330 IPR003593 AAA+ ATPase domain AL539_21330 IPR017871 ABC transporter, conserved site AL539_21330 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_21335 IPR009315 Phosphate-starvation-induced PsiE AL539_21335 IPR020948 Phosphate-starvation-induced PsiE-like AL539_21340 IPR005229 Conserved hypothetical protein CHP00255 AL539_21340 IPR013527 YicC-like, N-terminal AL539_21340 IPR013551 Domain of unknown function DUF1732 AL539_21350 IPR001247 Exoribonuclease, phosphorolytic domain 1 AL539_21350 IPR002381 Ribonuclease phosphorolytic, bacterial-type AL539_21350 IPR015847 Exoribonuclease, phosphorolytic domain 2 AL539_21350 IPR018336 Ribonuclease PH, conserved site AL539_21350 IPR020568 Ribosomal protein S5 domain 2-type fold AL539_21350 IPR027408 PNPase/RNase PH domain AL539_21350 IPR036345 AL539_21350 AL539_21355 IPR000836 Phosphoribosyltransferase domain AL539_21355 IPR004467 Orotate phosphoribosyl transferase domain AL539_21355 IPR023031 Orotate phosphoribosyltransferase AL539_21355 IPR029057 Phosphoribosyltransferase-like AL539_21360 IPR004960 Bacterial lipid A biosynthesis acyltransferase AL539_21360 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase AL539_21365 IPR001647 DNA-binding HTH domain, TetR-type AL539_21365 IPR009057 Homeodomain-like AL539_21365 IPR023769 Nucleoid occlusion factor SlmA AL539_21365 IPR036271 AL539_21365 AL539_21370 IPR003382 Flavoprotein AL539_21370 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC AL539_21370 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal AL539_21370 IPR035929 AL539_21370 AL539_21370 IPR036551 AL539_21370 AL539_21380 IPR003660 HAMP linker domain AL539_21380 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AL539_21380 IPR033480 AL539_21380 AL539_21385 IPR001405 RadC protein AL539_21385 IPR010994 RuvA domain 2-like AL539_21385 IPR020891 Uncharacterised protein family UPF0758, conserved site AL539_21385 IPR025657 RadC-like JAB domain AL539_21390 IPR001383 Ribosomal protein L28 AL539_21390 IPR026569 Ribosomal protein L28/L24 AL539_21390 IPR034704 AL539_21390 AL539_21390 IPR037147 AL539_21390 AL539_21395 IPR001705 Ribosomal protein L33 AL539_21395 IPR011332 Zinc-binding ribosomal protein AL539_21395 IPR018264 Ribosomal protein L33, conserved site AL539_21395 IPR038584 AL539_21395 AL539_21405 IPR010663 Zinc finger, DNA glycosylase/AP lyase/isoleucyl tRNA synthetase AL539_21405 IPR010979 Ribosomal protein S13-like, H2TH AL539_21405 IPR012319 DNA glycosylase/AP lyase, catalytic domain AL539_21405 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding AL539_21405 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site AL539_21405 IPR020629 Formamidopyrimidine-DNA glycosylase AL539_21405 IPR035937 AL539_21405 AL539_21410 IPR002654 Glycosyl transferase, family 25 AL539_21415 IPR001296 Glycosyl transferase, family 1 AL539_21420 IPR001980 Coenzyme A biosynthesis protein AL539_21420 IPR004821 Cytidyltransferase-like domain AL539_21420 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL539_21425 IPR006598 Lipopolysaccharide-modifying protein AL539_21430 IPR002201 Glycosyl transferase, family 9 AL539_21435 IPR001296 Glycosyl transferase, family 1 AL539_21435 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain AL539_21440 IPR000829 Diacylglycerol kinase, prokaryotic AL539_21440 IPR036945 AL539_21440 AL539_21445 IPR011009 Protein kinase-like domain AL539_21445 IPR022826 3-deoxy-D-manno-octulosonic acid kinase AL539_21450 IPR005888 dTDP-glucose 4,6-dehydratase AL539_21450 IPR016040 NAD(P)-binding domain AL539_21450 IPR036291 AL539_21450 AL539_21455 IPR005835 Nucleotidyl transferase AL539_21455 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form AL539_21455 IPR029044 Nucleotide-diphospho-sugar transferases AL539_21460 IPR005913 dTDP-4-dehydrorhamnose reductase AL539_21460 IPR029903 AL539_21460 AL539_21460 IPR036291 AL539_21460 AL539_21465 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related AL539_21465 IPR011051 RmlC-like cupin domain AL539_21465 IPR014710 RmlC-like jelly roll fold AL539_21470 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase AL539_21470 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 AL539_21470 IPR015424 Pyridoxal phosphate-dependent transferase AL539_21480 IPR011004 Trimeric LpxA-like AL539_21485 IPR001173 Glycosyltransferase 2-like AL539_21485 IPR029044 Nucleotide-diphospho-sugar transferases AL539_21490 IPR001296 Glycosyl transferase, family 1 AL539_21490 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal AL539_21490 IPR038107 AL539_21490 AL539_21495 IPR002201 Glycosyl transferase, family 9 AL539_21495 IPR011910 Lipopolysaccharide heptosyltransferase II AL539_21500 IPR004960 Bacterial lipid A biosynthesis acyltransferase AL539_21500 IPR011921 Lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase AL539_21505 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain AL539_21505 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase AL539_21505 IPR036291 AL539_21505 AL539_21510 IPR010344 Protein of unknown function DUF940 AL539_21515 IPR010425 Domain of unknown function DUF1017 AL539_21520 IPR021308 Group 4 capsule polysaccharide formation lipoprotein GfcB AL539_21520 IPR023373 YmcC-like domain AL539_21530 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel AL539_21530 IPR027385 Outer membrane protein beta-barrel AL539_21535 IPR003715 Polysaccharide export protein AL539_21535 IPR010425 Domain of unknown function DUF1017 AL539_21535 IPR019554 Soluble ligand binding domain AL539_21540 IPR003856 Lipopolysaccharide biosynthesis AL539_21540 IPR032807 AL539_21540 AL539_21545 IPR005888 dTDP-glucose 4,6-dehydratase AL539_21545 IPR016040 NAD(P)-binding domain AL539_21545 IPR036291 AL539_21545 AL539_21550 IPR005835 Nucleotidyl transferase AL539_21550 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form AL539_21550 IPR029044 Nucleotide-diphospho-sugar transferases AL539_21555 IPR005913 dTDP-4-dehydrorhamnose reductase AL539_21555 IPR029903 AL539_21555 AL539_21555 IPR036291 AL539_21555 AL539_21560 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related AL539_21560 IPR011051 RmlC-like cupin domain AL539_21560 IPR014710 RmlC-like jelly roll fold AL539_21565 IPR004821 Cytidyltransferase-like domain AL539_21565 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL539_21570 IPR002797 Polysaccharide biosynthesis protein AL539_21575 IPR007554 CDP-glycerol glycerophosphotransferase AL539_21585 IPR029044 Nucleotide-diphospho-sugar transferases AL539_21590 IPR001173 Glycosyltransferase 2-like AL539_21590 IPR029044 Nucleotide-diphospho-sugar transferases AL539_21595 IPR001296 Glycosyl transferase, family 1 AL539_21600 IPR003362 Bacterial sugar transferase AL539_21605 IPR001451 Bacterial transferase hexapeptide repeat AL539_21605 IPR011004 Trimeric LpxA-like AL539_21610 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase AL539_21610 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 AL539_21610 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 AL539_21610 IPR015424 Pyridoxal phosphate-dependent transferase AL539_21615 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain AL539_21615 IPR036291 AL539_21615 AL539_21620 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal AL539_21620 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like AL539_21620 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation AL539_21620 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal AL539_21620 IPR017476 UDP-glucose/GDP-mannose dehydrogenase AL539_21620 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type AL539_21620 IPR036220 AL539_21620 AL539_21620 IPR036291 AL539_21620 AL539_21625 IPR001279 Beta-lactamase-like AL539_21625 IPR011108 RNA-metabolising metallo-beta-lactamase AL539_21625 IPR022712 Beta-Casp domain AL539_21625 IPR036866 AL539_21625 AL539_21630 IPR002559 Transposase, IS4-like AL539_21630 IPR012337 Ribonuclease H-like domain AL539_21630 IPR025457 Domain of unknown function DUF4277 AL539_21635 IPR000652 Triosephosphate isomerase AL539_21635 IPR013785 Aldolase-type TIM barrel AL539_21635 IPR020861 Triosephosphate isomerase, active site AL539_21635 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic AL539_21635 IPR035990 AL539_21635 AL539_21640 IPR004220 5-carboxymethyl-2-hydroxymuconate isomerase AL539_21640 IPR014347 Tautomerase/MIF superfamily AL539_21645 IPR008523 Lactobacillus phage LBR48, DUF805 AL539_21650 IPR021482 Protein of unknown function DUF3135 AL539_21655 IPR036388 AL539_21655 AL539_21655 IPR036390 AL539_21655 AL539_21660 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase AL539_21665 IPR009252 Cell division protein ZapB AL539_21670 IPR005493 Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase AL539_21670 IPR010203 Regulator of ribonuclease activity A AL539_21670 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria AL539_21670 IPR036704 AL539_21670 AL539_21675 IPR000537 UbiA prenyltransferase family AL539_21675 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase AL539_21675 IPR026046 UbiA prenyltransferase domain containing protein 1 AL539_21695 IPR026881 WYL domain AL539_21700 IPR021248 Protein of unknown function DUF2787 AL539_21705 IPR001405 RadC protein AL539_21705 IPR020891 Uncharacterised protein family UPF0758, conserved site AL539_21705 IPR025657 RadC-like JAB domain AL539_21715 IPR003593 AAA+ ATPase domain AL539_21715 IPR003959 ATPase, AAA-type, core AL539_21715 IPR004491 Heat shock protein HslU AL539_21715 IPR019489 Clp ATPase, C-terminal AL539_21715 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_21720 IPR001353 Proteasome, subunit alpha/beta AL539_21720 IPR022281 ATP-dependent protease, HslV subunit AL539_21720 IPR029055 Nucleophile aminohydrolases, N-terminal AL539_21725 IPR007730 Sporulation-related domain AL539_21725 IPR011930 Cell division protein FtsN AL539_21725 IPR036680 AL539_21725 AL539_21730 IPR000843 Transcription regulator HTH, LacI AL539_21730 IPR010982 Lambda repressor-like, DNA-binding domain AL539_21730 IPR028082 Periplasmic binding protein-like I AL539_21735 IPR001650 Helicase, C-terminal AL539_21735 IPR005259 Primosomal protein n AL539_21735 IPR011545 DEAD/DEAH box helicase domain AL539_21735 IPR014001 Helicase, superfamily 1/2, ATP-binding domain AL539_21735 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_21745 IPR002150 Ribosomal protein L31 AL539_21745 IPR027491 Ribosomal protein L31 type A AL539_21745 IPR034704 AL539_21745 AL539_21750 IPR001848 Ribosomal protein S10 AL539_21750 IPR018268 Ribosomal protein S10, conserved site AL539_21750 IPR027486 Ribosomal protein S10 domain AL539_21750 IPR036838 AL539_21750 AL539_21755 IPR000597 Ribosomal protein L3 AL539_21755 IPR009000 Translation protein, beta-barrel domain AL539_21755 IPR019926 Ribosomal protein L3, conserved site AL539_21755 IPR019927 Ribosomal protein L3, bacterial/organelle-type AL539_21760 IPR002136 Ribosomal protein L4/L1e AL539_21760 IPR013005 Ribosomal protein L4/L1e, bacterial-type AL539_21760 IPR023574 Ribosomal protein L4 domain AL539_21765 IPR001014 Ribosomal protein L23/L25, conserved site AL539_21765 IPR012677 Nucleotide-binding, alpha-beta plait AL539_21765 IPR012678 Ribosomal protein L23/L15e core domain AL539_21765 IPR013025 Ribosomal protein L25/L23 AL539_21770 IPR002171 Ribosomal protein L2 AL539_21770 IPR005880 Ribosomal protein L2, bacterial/organellar-type AL539_21770 IPR008991 Translation protein SH3-like domain AL539_21770 IPR012340 Nucleic acid-binding, OB-fold AL539_21770 IPR014722 Ribosomal protein L2 domain 2 AL539_21770 IPR014726 Ribosomal protein L2, domain 3 AL539_21770 IPR022666 Ribosomal Proteins L2, RNA binding domain AL539_21770 IPR022669 Ribosomal protein L2, C-terminal AL539_21770 IPR022671 Ribosomal protein L2, conserved site AL539_21775 IPR002222 Ribosomal protein S19/S15 AL539_21775 IPR005732 Ribosomal protein S19, bacterial-type AL539_21775 IPR020934 Ribosomal protein S19 conserved site AL539_21775 IPR023575 Ribosomal protein S19, superfamily AL539_21780 IPR001063 Ribosomal protein L22/L17 AL539_21780 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type AL539_21780 IPR018260 Ribosomal protein L22/L17, conserved site AL539_21780 IPR036394 AL539_21780 AL539_21785 IPR001351 Ribosomal protein S3, C-terminal AL539_21785 IPR004044 K Homology domain, type 2 AL539_21785 IPR004087 K Homology domain AL539_21785 IPR005704 Ribosomal protein S3, bacterial AL539_21785 IPR009019 K homology domain, prokaryotic type AL539_21785 IPR015946 K homology domain-like, alpha/beta AL539_21785 IPR018280 Ribosomal protein S3, conserved site AL539_21785 IPR036419 AL539_21785 AL539_21790 IPR000114 Ribosomal protein L16 AL539_21790 IPR016180 Ribosomal protein L10e/L16 AL539_21790 IPR020798 Ribosomal protein L16, conserved site AL539_21790 IPR036920 AL539_21790 AL539_21795 IPR001854 Ribosomal protein L29 AL539_21795 IPR018254 Ribosomal protein L29, conserved site AL539_21795 IPR036049 AL539_21795 AL539_21800 IPR000266 Ribosomal protein S17 AL539_21800 IPR012340 Nucleic acid-binding, OB-fold AL539_21800 IPR019979 Ribosomal protein S17, conserved site AL539_21800 IPR019984 Ribosomal protein S17, bacterial-type AL539_21805 IPR000218 Ribosomal protein L14b/L23e AL539_21805 IPR005745 Ribosomal protein L14, bacterial-type AL539_21805 IPR019972 Ribosomal protein L14 conserved site AL539_21805 IPR036853 AL539_21805 AL539_21810 IPR003256 Ribosomal protein L24 AL539_21810 IPR005824 KOW AL539_21810 IPR005825 Ribosomal protein L24/L26, conserved site AL539_21810 IPR008991 Translation protein SH3-like domain AL539_21810 IPR014722 Ribosomal protein L2 domain 2 AL539_21815 IPR002132 Ribosomal protein L5 AL539_21815 IPR020929 Ribosomal protein L5, conserved site AL539_21815 IPR020930 Ribosomal protein L5, bacterial-type AL539_21815 IPR022803 Ribosomal protein L5 domain AL539_21815 IPR031309 AL539_21815 AL539_21815 IPR031310 AL539_21815 AL539_21820 IPR001209 Ribosomal protein S14 AL539_21820 IPR018271 Ribosomal protein S14, conserved site AL539_21820 IPR023036 Ribosomal protein S14, bacterial/plastid AL539_21825 IPR000630 Ribosomal protein S8 AL539_21825 IPR035987 AL539_21825 AL539_21830 IPR000702 Ribosomal protein L6 AL539_21830 IPR002358 Ribosomal protein L6, conserved site AL539_21830 IPR019906 Ribosomal protein L6, bacterial-type AL539_21830 IPR020040 Ribosomal protein L6, alpha-beta domain AL539_21830 IPR036789 AL539_21830 AL539_21835 IPR004389 Ribosomal protein L18, bacterial-type AL539_21835 IPR005484 Ribosomal protein L18/L5 AL539_21840 IPR005324 Ribosomal protein S5, C-terminal AL539_21840 IPR005712 Ribosomal protein S5, bacterial-type AL539_21840 IPR013810 Ribosomal protein S5, N-terminal AL539_21840 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AL539_21840 IPR018192 Ribosomal protein S5, N-terminal, conserved site AL539_21840 IPR020568 Ribosomal protein S5 domain 2-type fold AL539_21845 IPR005996 Ribosomal protein L30, bacterial-type AL539_21845 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain AL539_21845 IPR018038 Ribosomal protein L30, conserved site AL539_21845 IPR036919 AL539_21845 AL539_21850 IPR001196 Ribosomal protein L15, conserved site AL539_21850 IPR005749 Ribosomal protein L15, bacterial-type AL539_21850 IPR021131 Ribosomal protein L18e/L15P AL539_21850 IPR030878 AL539_21850 AL539_21850 IPR036227 AL539_21850 AL539_21855 IPR002208 SecY/SEC61-alpha family AL539_21855 IPR023201 SecY subunit domain AL539_21855 IPR026593 Protein translocase subunit SecY AL539_21855 IPR030659 AL539_21855 AL539_21860 IPR000473 Ribosomal protein L36 AL539_21860 IPR035977 AL539_21860 AL539_21865 IPR001892 Ribosomal protein S13 AL539_21865 IPR010979 Ribosomal protein S13-like, H2TH AL539_21865 IPR018269 Ribosomal protein S13, conserved site AL539_21865 IPR019980 Ribosomal protein S13, bacterial-type AL539_21865 IPR027437 30s ribosomal protein S13, C-terminal AL539_21870 IPR001971 Ribosomal protein S11 AL539_21870 IPR018102 Ribosomal S11, conserved site AL539_21870 IPR019981 Ribosomal protein S11, bacterial-type AL539_21870 IPR036967 AL539_21870 AL539_21875 IPR001912 Ribosomal protein S4/S9, N-terminal AL539_21875 IPR002942 RNA-binding S4 domain AL539_21875 IPR005709 Ribosomal protein S4, bacterial-type AL539_21875 IPR018079 Ribosomal protein S4, conserved site AL539_21875 IPR036986 AL539_21875 AL539_21880 IPR011260 RNA polymerase, alpha subunit, C-terminal AL539_21880 IPR011262 DNA-directed RNA polymerase, insert domain AL539_21880 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type AL539_21880 IPR011773 DNA-directed RNA polymerase, alpha subunit AL539_21880 IPR036603 AL539_21880 AL539_21880 IPR036643 AL539_21880 AL539_21885 IPR000456 Ribosomal protein L17 AL539_21885 IPR036373 AL539_21885 AL539_21890 IPR021302 Protein of unknown function DUF2780, VcgC/VcgE AL539_21895 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal AL539_21895 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain AL539_21895 IPR036944 AL539_21895 AL539_21900 IPR007340 Opacity-associated protein A AL539_21900 IPR013731 Opacity-associated protein A, N-terminal AL539_21905 IPR000182 GNAT domain AL539_21905 IPR016181 Acyl-CoA N-acyltransferase AL539_21910 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site AL539_21910 IPR001650 Helicase, C-terminal AL539_21910 IPR005580 DbpA, RNA-binding AL539_21910 IPR011545 DEAD/DEAH box helicase domain AL539_21910 IPR012677 Nucleotide-binding, alpha-beta plait AL539_21910 IPR014001 Helicase, superfamily 1/2, ATP-binding domain AL539_21910 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_21915 IPR000595 Cyclic nucleotide-binding domain AL539_21915 IPR014710 RmlC-like jelly roll fold AL539_21915 IPR018490 Cyclic nucleotide-binding-like AL539_21920 IPR004843 Calcineurin-like phosphoesterase domain, apaH type AL539_21920 IPR006146 5'-Nucleotidase, conserved site AL539_21920 IPR006179 5'-Nucleotidase/apyrase AL539_21920 IPR006294 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase AL539_21920 IPR008334 5'-Nucleotidase, C-terminal AL539_21920 IPR029052 Metallo-dependent phosphatase-like AL539_21920 IPR036907 AL539_21920 AL539_21925 IPR000878 Tetrapyrrole methylase AL539_21925 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site AL539_21925 IPR006366 Uroporphyrin-III C-methyltransferase AL539_21925 IPR014776 Tetrapyrrole methylase, subdomain 2 AL539_21925 IPR014777 Tetrapyrrole methylase, subdomain 1 AL539_21925 IPR035996 AL539_21925 AL539_21930 IPR002500 Phosphoadenosine phosphosulphate reductase AL539_21930 IPR011784 Sulphate adenylyltransferase, small subunit AL539_21930 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL539_21935 IPR000795 Elongation factor, GTP-binding domain AL539_21935 IPR005225 Small GTP-binding protein domain AL539_21935 IPR009000 Translation protein, beta-barrel domain AL539_21935 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal AL539_21935 IPR011779 Sulphate adenylyltransferase, large subunit AL539_21935 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_21935 IPR031157 AL539_21935 AL539_21940 IPR004680 Citrate transporter-like domain AL539_21940 IPR006037 Regulator of K+ conductance, C-terminal AL539_21940 IPR036721 AL539_21940 AL539_21945 IPR002891 Adenylylsulphate kinase AL539_21945 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_21950 IPR021254 Protein of unknown function DUF2806 AL539_21955 IPR021727 Protein of unknown function DUF3299 AL539_21960 IPR003838 Permease FtsX-like AL539_21960 IPR025857 MacB-like periplasmic core domain AL539_21965 IPR003439 ABC transporter-like AL539_21965 IPR003593 AAA+ ATPase domain AL539_21965 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_21970 IPR021253 Protein of unknown function DUF2796 AL539_21975 IPR019731 Protein of unknown function DUF2607 AL539_21980 IPR006513 Conserved hypothetical protein CHP01626, YtfJ AL539_21985 IPR009491 Protein of unknown function DUF1107 AL539_21990 IPR002569 Peptide methionine sulphoxide reductase MsrA AL539_21990 IPR036509 AL539_21990 AL539_21995 IPR000184 Bacterial surface antigen (D15) AL539_21995 IPR010827 Surface antigen variable number AL539_21995 IPR035243 AL539_21995 AL539_22000 IPR007452 Protein of unknown function DUF490 AL539_22005 IPR009288 AIG2-like AL539_22005 IPR036568 AL539_22005 AL539_22010 IPR021242 Protein of unknown function DUF2799 AL539_22015 IPR025668 Transposase DDE domain AL539_22025 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AL539_22040 IPR005017 Membrane protein, aromatic hydrocarbon degradation AL539_22045 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AL539_22045 IPR004090 Chemotaxis methyl-accepting receptor AL539_22060 IPR008162 Inorganic pyrophosphatase AL539_22060 IPR036649 AL539_22060 AL539_22065 IPR000146 Fructose-1,6-bisphosphatase class 1/Sedoheputulose-1,7-bisphosphatase AL539_22065 IPR020548 Fructose-1,6-bisphosphatase, active site AL539_22065 IPR028343 Fructose-1,6-bisphosphatase AL539_22065 IPR033391 AL539_22065 AL539_22075 IPR000713 Mur ligase, N-terminal AL539_22075 IPR004101 Mur ligase, C-terminal AL539_22075 IPR005757 Murein peptide ligase AL539_22075 IPR013221 Mur ligase, central AL539_22075 IPR036565 AL539_22075 AL539_22075 IPR036615 AL539_22075 AL539_22080 IPR003382 Flavoprotein AL539_22080 IPR004507 Decarboxylase UbiX/Pad1 AL539_22080 IPR036551 AL539_22080 AL539_22085 IPR005948 Thiamine ABC transporter periplasmic binding protein AL539_22085 IPR005967 Proteobacterial thiamine ABC transporter, periplasmic binding protein AL539_22090 IPR000515 MetI-like domain AL539_22090 IPR005947 Thiamine ABC transporter, permease protein AL539_22090 IPR035906 AL539_22090 AL539_22095 IPR003439 ABC transporter-like AL539_22095 IPR003593 AAA+ ATPase domain AL539_22095 IPR005968 Thiamine ABC transporter, ATP-binding protein ThiQ AL539_22095 IPR017871 ABC transporter, conserved site AL539_22095 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_22100 IPR000847 Transcription regulator HTH, LysR AL539_22100 IPR005119 LysR, substrate-binding AL539_22100 IPR036388 AL539_22100 AL539_22100 IPR036390 AL539_22100 AL539_22105 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal AL539_22105 IPR013785 Aldolase-type TIM barrel AL539_22110 IPR006015 Universal stress protein A AL539_22110 IPR006016 UspA AL539_22110 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL539_22115 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit AL539_22115 IPR011853 TRAP transporter, 4TM/12TM fusion protein AL539_22115 IPR021814 Protein of unknown function DUF3394 AL539_22125 IPR011852 TRAP transporter solute receptor, TAXI family AL539_22135 IPR001669 Arginine repressor AL539_22135 IPR020899 Arginine repressor, C-terminal AL539_22135 IPR020900 Arginine repressor, DNA-binding domain AL539_22135 IPR036251 AL539_22135 AL539_22135 IPR036388 AL539_22135 AL539_22135 IPR036390 AL539_22135 AL539_22140 IPR001236 Lactate/malate dehydrogenase, N-terminal AL539_22140 IPR001252 Malate dehydrogenase, active site AL539_22140 IPR001557 L-lactate/malate dehydrogenase AL539_22140 IPR010097 Malate dehydrogenase, type 1 AL539_22140 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal AL539_22140 IPR022383 Lactate/malate dehydrogenase, C-terminal AL539_22140 IPR023958 Malate dehydrogenase, type 1, bacterial AL539_22140 IPR036291 AL539_22140 AL539_22150 IPR000092 Polyprenyl synthetase AL539_22150 IPR008949 Terpenoid synthase AL539_22150 IPR033749 AL539_22150 AL539_22155 IPR001787 Ribosomal protein L21 AL539_22155 IPR018258 Ribosomal protein L21, conserved site AL539_22155 IPR028909 Ribosomal protein L21-like AL539_22155 IPR036164 AL539_22155 AL539_22160 IPR001684 Ribosomal protein L27 AL539_22160 IPR018261 Ribosomal protein L27, conserved site AL539_22165 IPR006073 GTP binding domain AL539_22165 IPR006074 GTP1/OBG, conserved site AL539_22165 IPR006169 GTP1/OBG domain AL539_22165 IPR014100 GTP-binding protein Obg/CgtA AL539_22165 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_22165 IPR035101 AL539_22165 AL539_22165 IPR036726 AL539_22165 AL539_22170 IPR010619 Domain of unknown function DUF1212 AL539_22175 IPR024528 Domain of unknown function DUF3815 AL539_22180 IPR001796 Dihydrofolate reductase domain AL539_22180 IPR012259 Dihydrofolate reductase AL539_22180 IPR024072 Dihydrofolate reductase-like domain AL539_22185 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) AL539_22185 IPR004843 Calcineurin-like phosphoesterase domain, apaH type AL539_22185 IPR029052 Metallo-dependent phosphatase-like AL539_22190 IPR007474 ApaG domain AL539_22190 IPR023065 Uncharacterised protein family ApaG AL539_22190 IPR036767 AL539_22190 AL539_22195 IPR001737 Ribosomal RNA adenine methylase transferase AL539_22195 IPR011530 Ribosomal RNA adenine dimethylase AL539_22195 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site AL539_22195 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal AL539_22195 IPR023165 rRNA adenine dimethylase-like AL539_22195 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like AL539_22200 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA AL539_22200 IPR037510 AL539_22200 AL539_22205 IPR015391 SurA N-terminal AL539_22205 IPR023034 Peptidyl-prolyl isomerase SurA AL539_22205 IPR027304 Trigger factor/SurA domain AL539_22210 IPR005653 Organic solvent tolerance-like, N-terminal AL539_22210 IPR007543 Organic solvent tolerance protein, C-terminal AL539_22210 IPR020889 Lipopolysaccharide assembly, LptD AL539_22215 IPR001623 DnaJ domain AL539_22215 IPR007791 Heat shock protein DnaJ-like protein DjlA AL539_22215 IPR023749 DnaJ-like protein DjlA AL539_22215 IPR029024 TerB-like AL539_22215 IPR036869 AL539_22215 AL539_22220 IPR006869 Domain of unknown function DUF547 AL539_22225 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel AL539_22225 IPR004431 3-isopropylmalate dehydratase, small subunit AL539_22225 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AL539_22230 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha AL539_22230 IPR004430 3-isopropylmalate dehydratase, large subunit AL539_22230 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 AL539_22230 IPR018136 Aconitase family, 4Fe-4S cluster binding site AL539_22230 IPR036008 AL539_22230 AL539_22235 IPR004429 Isopropylmalate dehydrogenase AL539_22235 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site AL539_22235 IPR024084 Isopropylmalate dehydrogenase-like domain AL539_22240 IPR000891 Pyruvate carboxyltransferase AL539_22240 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site AL539_22240 IPR005671 2-isopropylmalate synthase, bacterial-type AL539_22240 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain AL539_22240 IPR013785 Aldolase-type TIM barrel AL539_22240 IPR036230 AL539_22240 AL539_22250 IPR003646 SH3-like domain, bacterial-type AL539_22255 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AL539_22255 IPR036938 AL539_22255 AL539_22260 IPR005262 Conserved hypothetical protein CHP00661 AL539_22265 IPR000847 Transcription regulator HTH, LysR AL539_22265 IPR005119 LysR, substrate-binding AL539_22265 IPR036388 AL539_22265 AL539_22265 IPR036390 AL539_22265 AL539_22270 IPR000873 AMP-dependent synthetase/ligase AL539_22270 IPR020845 AMP-binding, conserved site AL539_22275 IPR000399 TPP-binding enzyme, conserved site AL539_22275 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding AL539_22275 IPR012000 Thiamine pyrophosphate enzyme, central domain AL539_22275 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain AL539_22275 IPR012846 Acetolactate synthase, large subunit, biosynthetic AL539_22275 IPR029035 DHS-like NAD/FAD-binding domain AL539_22275 IPR029061 Thiamin diphosphate-binding fold AL539_22280 IPR004789 Acetolactate synthase, small subunit AL539_22280 IPR019455 Acetolactate synthase, small subunit, C-terminal AL539_22280 IPR027271 AL539_22280 AL539_22285 IPR000014 PAS domain AL539_22285 IPR000160 GGDEF domain AL539_22285 IPR029151 Periplasmic sensor domain-like AL539_22285 IPR029787 Nucleotide cyclase AL539_22285 IPR033479 AL539_22285 AL539_22285 IPR035965 AL539_22285 AL539_22290 IPR000524 Transcription regulator HTH, GntR AL539_22290 IPR008920 Transcription regulator FadR/GntR, C-terminal AL539_22290 IPR036388 AL539_22290 AL539_22290 IPR036390 AL539_22290 AL539_22295 IPR001697 Pyruvate kinase AL539_22295 IPR011037 Pyruvate kinase-like, insert domain AL539_22295 IPR015793 Pyruvate kinase, barrel AL539_22295 IPR015795 Pyruvate kinase, C-terminal AL539_22295 IPR015806 Pyruvate kinase, beta-barrel insert domain AL539_22295 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain AL539_22295 IPR018209 Pyruvate kinase, active site AL539_22295 IPR036918 AL539_22295 AL539_22300 IPR001034 HTH DeoR N-terminal domain AL539_22300 IPR014036 DeoR C-terminal sensor domain AL539_22300 IPR018356 Transcription regulator, HTH DeoR-type, conserved site AL539_22300 IPR036388 AL539_22300 AL539_22300 IPR036390 AL539_22300 AL539_22300 IPR037171 AL539_22300 AL539_22305 IPR001347 Sugar isomerase (SIS) AL539_22305 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising AL539_22305 IPR029055 Nucleophile aminohydrolases, N-terminal AL539_22310 IPR011335 Restriction endonuclease type II-like AL539_22310 IPR011856 tRNA endonuclease-like domain AL539_22310 IPR014832 TnsA endonuclease C-terminal AL539_22310 IPR014833 TnsA endonuclease, N-terminal AL539_22310 IPR036388 AL539_22310 AL539_22310 IPR036390 AL539_22310 AL539_22315 IPR001584 Integrase, catalytic core AL539_22315 IPR012337 Ribonuclease H-like domain AL539_22315 IPR015378 Transposase-like, Mu, C-terminal AL539_22315 IPR036397 AL539_22315 AL539_22320 IPR003593 AAA+ ATPase domain AL539_22320 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_22325 IPR009492 TniQ AL539_22325 IPR032750 AL539_22325 AL539_22335 IPR002052 DNA methylase, N-6 adenine-specific, conserved site AL539_22335 IPR003356 DNA methylase, adenine-specific AL539_22335 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain AL539_22335 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like AL539_22335 IPR038333 AL539_22335 AL539_22340 IPR000055 Restriction endonuclease, type I, HsdS AL539_22345 IPR001650 Helicase, C-terminal AL539_22345 IPR006935 Helicase/UvrB domain AL539_22345 IPR013670 EcoEI R protein C-terminal domain AL539_22345 IPR014001 Helicase, superfamily 1/2, ATP-binding domain AL539_22345 IPR025285 Domain of unknown function DUF4145 AL539_22345 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_22350 IPR000477 Reverse transcriptase domain AL539_22350 IPR036526 AL539_22350 AL539_22360 IPR001670 Alcohol dehydrogenase, iron-type AL539_22360 IPR016205 Glycerol dehydrogenase AL539_22360 IPR018211 Alcohol dehydrogenase, iron-type, conserved site AL539_22365 IPR004006 Dak kinase AL539_22365 IPR012736 Dihydroxyacetone kinase DhaK, subunit 1 AL539_22370 IPR004007 DhaL domain AL539_22370 IPR012737 Dihydroxyacetone kinase, subunit L AL539_22370 IPR036117 AL539_22370 AL539_22375 IPR000032 Phosphocarrier HPr protein-like AL539_22375 IPR000121 PEP-utilising enzyme, C-terminal AL539_22375 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site AL539_22375 IPR004701 Phosphotransferase system, mannose-type IIA component AL539_22375 IPR006318 Phosphoenolpyruvate-utilising enzyme AL539_22375 IPR008279 PEP-utilising enzyme, mobile domain AL539_22375 IPR008731 Phosphotransferase system, enzyme I N-terminal AL539_22375 IPR012844 Dihydroxyacetone kinase phosphotransferase subunit, N-terminal domain AL539_22375 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain AL539_22375 IPR018274 PEP-utilising enzyme, active site AL539_22375 IPR023151 PEP-utilising enzyme, conserved site AL539_22375 IPR035895 AL539_22375 AL539_22375 IPR036618 AL539_22375 AL539_22375 IPR036637 AL539_22375 AL539_22375 IPR036662 AL539_22375 AL539_22380 IPR002078 RNA polymerase sigma factor 54 interaction domain AL539_22380 IPR002197 DNA binding HTH domain, Fis-type AL539_22380 IPR009057 Homeodomain-like AL539_22380 IPR013767 PAS fold AL539_22380 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AL539_22380 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AL539_22380 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_22380 IPR029016 GAF domain-like AL539_22380 IPR035965 AL539_22380 AL539_22385 IPR007761 Mannitol repressor AL539_22385 IPR038026 AL539_22385 AL539_22390 IPR000669 Mannitol dehydrogenase AL539_22390 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like AL539_22390 IPR013118 Mannitol dehydrogenase, C-terminal AL539_22390 IPR013131 Mannitol dehydrogenase, N-terminal AL539_22390 IPR013328 Dehydrogenase, multihelical AL539_22390 IPR023027 Mannitol dehydrogenase, conserved site AL539_22390 IPR023028 Mannitol-1-phosphate 5-dehydrogenase AL539_22390 IPR036291 AL539_22390 AL539_22395 IPR002178 PTS EIIA type-2 domain AL539_22395 IPR003352 Phosphotransferase system, EIIC AL539_22395 IPR003501 Phosphotransferase system, EIIB component, type 2/3 AL539_22395 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC AL539_22395 IPR016152 Phosphotransferase/anion transporter AL539_22395 IPR036095 AL539_22395 AL539_22400 IPR002123 Phospholipid/glycerol acyltransferase AL539_22400 IPR016181 Acyl-CoA N-acyltransferase AL539_22405 IPR007497 Protein of unknown function DUF541 AL539_22405 IPR016907 Uncharacterised conserved protein UCP029033, periplasmic protein AL539_22415 IPR004872 Lipoprotein NlpA family AL539_22420 IPR002104 Integrase, catalytic AL539_22420 IPR010998 Integrase, Lambda-type, N-terminal AL539_22420 IPR011010 DNA breaking-rejoining enzyme, catalytic core AL539_22420 IPR013762 Integrase-like, catalytic core AL539_22420 IPR025166 Domain of unknown function DUF4102 AL539_22420 IPR038488 AL539_22420 AL539_22430 IPR036390 AL539_22430 AL539_22435 IPR002059 Cold-shock protein, DNA-binding AL539_22435 IPR011129 Cold shock protein AL539_22435 IPR012156 Cold shock, CspA AL539_22435 IPR012340 Nucleic acid-binding, OB-fold AL539_22435 IPR019844 Cold-shock conserved site AL539_22450 IPR002059 Cold-shock protein, DNA-binding AL539_22450 IPR011129 Cold shock protein AL539_22450 IPR012156 Cold shock, CspA AL539_22450 IPR012340 Nucleic acid-binding, OB-fold AL539_22450 IPR019844 Cold-shock conserved site AL539_22460 IPR012893 HipA-like, C-terminal AL539_22460 IPR017508 HipA, N-terminal subdomain 1 AL539_22465 IPR029052 Metallo-dependent phosphatase-like AL539_22475 IPR009061 DNA binding domain, putative AL539_22480 IPR007560 Restriction endonuclease type IV, Mrr AL539_22480 IPR011335 Restriction endonuclease type II-like AL539_22480 IPR011856 tRNA endonuclease-like domain AL539_22480 IPR013498 DNA topoisomerase, type IA, zn finger AL539_22485 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_22490 IPR014017 DNA helicase, UvrD-like, C-terminal AL539_22490 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_22500 IPR025683 Protein beta AL539_22510 IPR012893 HipA-like, C-terminal AL539_22510 IPR017508 HipA, N-terminal subdomain 1 AL539_22515 IPR001387 Cro/C1-type helix-turn-helix domain AL539_22515 IPR010982 Lambda repressor-like, DNA-binding domain AL539_22525 IPR000943 RNA polymerase sigma-70 AL539_22525 IPR007127 RNA polymerase sigma factor 70, region 1.1 AL539_22525 IPR007624 RNA polymerase sigma-70 region 3 AL539_22525 IPR007627 RNA polymerase sigma-70 region 2 AL539_22525 IPR007630 RNA polymerase sigma-70 region 4 AL539_22525 IPR007631 RNA polymerase sigma factor 70, non-essential domain AL539_22525 IPR009042 RNA polymerase sigma-70 region 1.2 AL539_22525 IPR012760 RNA polymerase sigma factor RpoD, C-terminal AL539_22525 IPR013324 RNA polymerase sigma factor, region 3/4 AL539_22525 IPR013325 RNA polymerase sigma factor, region 2 AL539_22525 IPR014284 RNA polymerase sigma-70 like domain AL539_22525 IPR028630 RNA polymerase sigma factor RpoD AL539_22525 IPR036388 AL539_22525 AL539_22530 IPR002694 Zinc finger, CHC2-type AL539_22530 IPR006171 Toprim domain AL539_22530 IPR006295 DNA primase, DnaG AL539_22530 IPR013173 DNA primase DnaG, DnaB-binding domain AL539_22530 IPR013264 DNA primase, catalytic core, N-terminal AL539_22530 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal AL539_22530 IPR019475 DNA primase, DnaB-helicase binding domain AL539_22530 IPR030846 AL539_22530 AL539_22530 IPR036977 AL539_22530 AL539_22530 IPR037068 AL539_22530 AL539_22535 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related AL539_22535 IPR019004 Uncharacterised domain YOR215C, mitochondrial AL539_22535 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal AL539_22540 IPR001911 Ribosomal protein S21 AL539_22540 IPR018278 Ribosomal protein S21, conserved site AL539_22540 IPR038380 AL539_22540 AL539_22545 IPR000905 Gcp-like domain AL539_22545 IPR017860 Peptidase M22, conserved site AL539_22545 IPR017861 Kae1/YgjD family AL539_22545 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD AL539_22550 IPR000073 Alpha/beta hydrolase fold-1 AL539_22550 IPR000639 Epoxide hydrolase-like AL539_22550 IPR029058 Alpha/Beta hydrolase fold AL539_22555 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY AL539_22560 IPR006156 Dihydroneopterin aldolase AL539_22560 IPR006157 Dihydroneopterin aldolase/epimerase domain AL539_22565 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK AL539_22565 IPR035907 AL539_22565 AL539_22570 IPR003824 Undecaprenyl-diphosphatase UppP AL539_22575 IPR002646 Poly A polymerase, head domain AL539_22575 IPR006674 HD domain AL539_22575 IPR012006 tRNA nucleotidyltransferase, proteobacteria AL539_22575 IPR032828 AL539_22575 AL539_22580 IPR002477 Peptidoglycan binding-like AL539_22580 IPR003593 AAA+ ATPase domain AL539_22580 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_22580 IPR036365 AL539_22580 AL539_22580 IPR036366 AL539_22580 AL539_22585 IPR032389 AL539_22585 AL539_22590 IPR000101 Gamma-glutamyltranspeptidase AL539_22590 IPR029055 Nucleophile aminohydrolases, N-terminal AL539_22595 IPR003646 SH3-like domain, bacterial-type AL539_22595 IPR016476 SH3 domain protein AL539_22600 IPR001204 Phosphate transporter AL539_22605 IPR002727 Protein of unknown function DUF47 AL539_22605 IPR018445 Putitive phosphate transport regulator AL539_22605 IPR038078 AL539_22605 AL539_22610 IPR007899 CHAD AL539_22610 IPR023577 CYTH-like domain AL539_22610 IPR033469 AL539_22610 AL539_22610 IPR038186 AL539_22610 AL539_22615 IPR013099 Two pore domain potassium channel domain AL539_22615 IPR027359 Voltage-dependent channel, four helix bundle domain AL539_22615 IPR028325 Voltage-gated potassium channel AL539_22620 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AL539_22620 IPR004090 Chemotaxis methyl-accepting receptor AL539_22625 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain AL539_22625 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase AL539_22625 IPR023057 Glutamate-ammonia-ligase adenylyltransferase AL539_22630 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site AL539_22630 IPR004821 Cytidyltransferase-like domain AL539_22630 IPR011611 Carbohydrate kinase PfkB AL539_22630 IPR011913 RfaE bifunctional protein, domain I AL539_22630 IPR011914 RfaE bifunctional protein, domain II AL539_22630 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL539_22630 IPR023030 Bifunctional protein HldE AL539_22630 IPR029056 Ribokinase-like AL539_22635 IPR003423 Outer membrane efflux protein AL539_22635 IPR010130 Type I secretion outer membrane protein, TolC AL539_22640 IPR000086 NUDIX hydrolase domain AL539_22640 IPR004385 Nucleoside diphosphate pyrophosphatase AL539_22640 IPR015797 NUDIX hydrolase domain-like AL539_22640 IPR020084 NUDIX hydrolase, conserved site AL539_22645 IPR009659 Protein of unknown function DUF1249 AL539_22650 IPR004843 Calcineurin-like phosphoesterase domain, apaH type AL539_22650 IPR013622 Calcineurin-like phosphoesterase C-terminal AL539_22650 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA AL539_22650 IPR029052 Metallo-dependent phosphatase-like AL539_22655 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA AL539_22655 IPR029058 Alpha/Beta hydrolase fold AL539_22660 IPR001241 DNA topoisomerase, type IIA AL539_22660 IPR002288 DNA gyrase B subunit, C-terminal AL539_22660 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_22660 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative AL539_22660 IPR006171 Toprim domain AL539_22660 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 AL539_22660 IPR013759 DNA topoisomerase, type IIA, central domain AL539_22660 IPR013760 DNA topoisomerase, type IIA-like domain AL539_22660 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AL539_22660 IPR020568 Ribosomal protein S5 domain 2-type fold AL539_22660 IPR036890 AL539_22660 AL539_22665 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal AL539_22665 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative AL539_22665 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel AL539_22665 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain AL539_22665 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta AL539_22665 IPR013760 DNA topoisomerase, type IIA-like domain AL539_22665 IPR035516 AL539_22665 AL539_22670 IPR001478 PDZ domain AL539_22670 IPR001940 Peptidase S1C AL539_22670 IPR009003 Trypsin-like cysteine/serine peptidase domain AL539_22670 IPR011783 Peptidase S1C, DegS AL539_22670 IPR036034 AL539_22670 AL539_22675 IPR001478 PDZ domain AL539_22675 IPR001940 Peptidase S1C AL539_22675 IPR009003 Trypsin-like cysteine/serine peptidase domain AL539_22675 IPR011782 Peptidase S1C, Do AL539_22675 IPR036034 AL539_22675 AL539_22680 IPR009386 Protein of unknown function DUF1043 AL539_22690 IPR005654 ATPase, AFG1-like AL539_22690 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_22690 IPR030870 AL539_22690 AL539_22700 IPR005822 Ribosomal protein L13 AL539_22700 IPR005823 Ribosomal protein L13, bacterial-type AL539_22700 IPR023563 Ribosomal protein L13, conserved site AL539_22700 IPR036899 AL539_22700 AL539_22705 IPR000754 Ribosomal protein S9 AL539_22705 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AL539_22705 IPR020568 Ribosomal protein S5 domain 2-type fold AL539_22705 IPR020574 Ribosomal protein S9, conserved site AL539_22705 IPR023035 Ribosomal protein S9, bacterial/plastid AL539_22710 IPR005805 Rieske iron-sulphur protein, C-terminal AL539_22710 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit AL539_22710 IPR017941 Rieske [2Fe-2S] iron-sulphur domain AL539_22710 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal AL539_22710 IPR036922 AL539_22710 AL539_22715 IPR005797 Cytochrome b/b6, N-terminal AL539_22715 IPR005798 Cytochrome b/b6, C-terminal AL539_22715 IPR016174 Di-haem cytochrome, transmembrane AL539_22715 IPR027387 Cytochrome b/b6-like domain AL539_22715 IPR030689 AL539_22715 AL539_22715 IPR036150 AL539_22715 AL539_22720 IPR002326 Cytochrome c1 AL539_22720 IPR036909 AL539_22720 AL539_22725 IPR004045 Glutathione S-transferase, N-terminal AL539_22725 IPR004046 Glutathione S-transferase, C-terminal AL539_22725 IPR036249 AL539_22725 AL539_22725 IPR036282 AL539_22725 AL539_22730 IPR007481 Stringent starvation protein B AL539_22730 IPR036760 AL539_22730 AL539_22735 IPR007055 BON domain AL539_22735 IPR014004 Transport-associated and nodulation domain, bacteria AL539_22740 IPR001347 Sugar isomerase (SIS) AL539_22740 IPR004515 Phosphoheptose isomerase AL539_22745 IPR003509 Uncharacterised protein family UPF0102 AL539_22745 IPR011335 Restriction endonuclease type II-like AL539_22745 IPR011856 tRNA endonuclease-like domain AL539_22750 IPR007443 Penicillin-binding protein activator LpoA AL539_22750 IPR011990 Tetratricopeptide-like helical domain AL539_22750 IPR028082 Periplasmic binding protein-like I AL539_22755 IPR000878 Tetrapyrrole methylase AL539_22755 IPR008189 rRNA small subunit methyltransferase I AL539_22755 IPR014776 Tetrapyrrole methylase, subdomain 2 AL539_22755 IPR014777 Tetrapyrrole methylase, subdomain 1 AL539_22755 IPR018063 SAM-dependent methyltransferase RsmI, conserved site AL539_22755 IPR035996 AL539_22755 AL539_22770 IPR002903 Ribosomal RNA small subunit methyltransferase H AL539_22770 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain AL539_22770 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like AL539_22775 IPR011922 Cell division protein FtsL AL539_22780 IPR001460 Penicillin-binding protein, transpeptidase AL539_22780 IPR005311 Penicillin-binding protein, dimerisation domain AL539_22780 IPR012338 Beta-lactamase/transpeptidase-like AL539_22780 IPR036138 AL539_22780 AL539_22780 IPR037532 AL539_22780 AL539_22785 IPR000713 Mur ligase, N-terminal AL539_22785 IPR004101 Mur ligase, C-terminal AL539_22785 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase AL539_22785 IPR013221 Mur ligase, central AL539_22785 IPR035911 AL539_22785 AL539_22785 IPR036565 AL539_22785 AL539_22785 IPR036615 AL539_22785 AL539_22790 IPR000713 Mur ligase, N-terminal AL539_22790 IPR004101 Mur ligase, C-terminal AL539_22790 IPR005863 UDP-MurNAc-pentapeptide synthetase AL539_22790 IPR013221 Mur ligase, central AL539_22790 IPR035911 AL539_22790 AL539_22790 IPR036565 AL539_22790 AL539_22790 IPR036615 AL539_22790 AL539_22795 IPR000715 Glycosyl transferase, family 4 AL539_22795 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase AL539_22795 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site AL539_22800 IPR004101 Mur ligase, C-terminal AL539_22800 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase AL539_22800 IPR013221 Mur ligase, central AL539_22800 IPR036565 AL539_22800 AL539_22800 IPR036615 AL539_22800 AL539_22805 IPR001182 Cell cycle protein FtsW/RodA AL539_22805 IPR013437 Cell division protein FtsW AL539_22805 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site AL539_22810 IPR004276 Glycosyl transferase, family 28 AL539_22810 IPR006009 N-acetylglucosaminyltransferase, MurG AL539_22810 IPR007235 Glycosyl transferase, family 28, C-terminal AL539_22815 IPR000713 Mur ligase, N-terminal AL539_22815 IPR004101 Mur ligase, C-terminal AL539_22815 IPR005758 UDP-N-acetylmuramate-alanine ligase AL539_22815 IPR013221 Mur ligase, central AL539_22815 IPR036565 AL539_22815 AL539_22815 IPR036615 AL539_22815 AL539_22820 IPR005548 Cell division protein FtsQ/DivIB AL539_22820 IPR013685 Polypeptide-transport-associated, FtsQ-type AL539_22820 IPR026579 Cell division protein FtsQ AL539_22825 IPR003494 SHS2 domain inserted in FtsA AL539_22825 IPR020823 Cell division protein FtsA AL539_22830 IPR000158 Cell division protein FtsZ AL539_22830 IPR003008 Tubulin/FtsZ, GTPase domain AL539_22830 IPR008280 Tubulin/FtsZ, C-terminal AL539_22830 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain AL539_22830 IPR020805 Cell division protein FtsZ, conserved site AL539_22830 IPR024757 Cell division protein FtsZ, C-terminal AL539_22830 IPR036525 AL539_22830 AL539_22830 IPR037103 AL539_22830 AL539_22835 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase AL539_22835 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal AL539_22835 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal AL539_22835 IPR020568 Ribosomal protein S5 domain 2-type fold AL539_22840 IPR007922 Protein of unknown function DUF721/UPF0232 AL539_22845 IPR000185 Protein translocase subunit SecA AL539_22845 IPR004027 SEC-C motif AL539_22845 IPR011115 SecA DEAD-like, N-terminal AL539_22845 IPR011116 SecA Wing/Scaffold AL539_22845 IPR011130 SecA preprotein, cross-linking domain AL539_22845 IPR020937 SecA conserved site AL539_22845 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_22845 IPR036266 AL539_22845 AL539_22845 IPR036670 AL539_22845 AL539_22850 IPR000086 NUDIX hydrolase domain AL539_22850 IPR003561 Mutator MutT AL539_22850 IPR015797 NUDIX hydrolase domain-like AL539_22850 IPR020084 NUDIX hydrolase, conserved site AL539_22850 IPR020476 NUDIX hydrolase AL539_22855 IPR000846 Dihydrodipicolinate reductase, N-terminal AL539_22855 IPR022663 Dihydrodipicolinate reductase, C-terminal AL539_22855 IPR022664 Dihydrodipicolinate reductase, conserved site AL539_22855 IPR023940 Dihydrodipicolinate reductase, bacterial AL539_22855 IPR036291 AL539_22855 AL539_22860 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain AL539_22860 IPR006274 Carbamoyl-phosphate synthase, small subunit AL539_22860 IPR017926 Glutamine amidotransferase AL539_22860 IPR029062 Class I glutamine amidotransferase-like AL539_22860 IPR036480 AL539_22860 AL539_22865 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain AL539_22865 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain AL539_22865 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain AL539_22865 IPR006275 Carbamoyl-phosphate synthase, large subunit AL539_22865 IPR011607 Methylglyoxal synthase-like domain AL539_22865 IPR016185 Pre-ATP-grasp domain AL539_22865 IPR036897 AL539_22865 AL539_22865 IPR036914 AL539_22865 AL539_22880 IPR002781 Transmembrane protein TauE like AL539_22885 IPR000847 Transcription regulator HTH, LysR AL539_22885 IPR005119 LysR, substrate-binding AL539_22885 IPR036388 AL539_22885 AL539_22885 IPR036390 AL539_22885 AL539_22890 IPR005115 Uncharacterised domain UPF0126 AL539_22895 IPR002491 ABC transporter periplasmic binding domain AL539_22895 IPR023544 ABC transporter, vitamin B12-binding protein AL539_22900 IPR004485 Cobalamin biosynthesis CobD/CbiB AL539_22905 IPR000845 Nucleoside phosphorylase domain AL539_22905 IPR010049 MTA/SAH nucleosidase AL539_22905 IPR035994 AL539_22905 AL539_22910 IPR010865 Protein of unknown function DUF1499 AL539_22915 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 AL539_22915 IPR009051 Alpha-helical ferredoxin AL539_22915 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain AL539_22915 IPR028261 Dihydroprymidine dehydrogenase domain II AL539_22915 IPR036188 AL539_22915 AL539_22920 IPR002489 Glutamate synthase, alpha subunit, C-terminal AL539_22920 IPR002932 Glutamate synthase domain AL539_22920 IPR006982 Glutamate synthase, central-N AL539_22920 IPR013785 Aldolase-type TIM barrel AL539_22920 IPR017932 Glutamine amidotransferase type 2 domain AL539_22920 IPR029055 Nucleophile aminohydrolases, N-terminal AL539_22920 IPR036485 AL539_22920 AL539_22925 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 AL539_22925 IPR009051 Alpha-helical ferredoxin AL539_22925 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain AL539_22925 IPR028261 Dihydroprymidine dehydrogenase domain II AL539_22925 IPR036188 AL539_22925 AL539_22930 IPR002489 Glutamate synthase, alpha subunit, C-terminal AL539_22930 IPR002932 Glutamate synthase domain AL539_22930 IPR006982 Glutamate synthase, central-N AL539_22930 IPR013785 Aldolase-type TIM barrel AL539_22930 IPR017932 Glutamine amidotransferase type 2 domain AL539_22930 IPR029055 Nucleophile aminohydrolases, N-terminal AL539_22930 IPR036485 AL539_22930 AL539_22935 IPR005911 Conserved hypothetical protein CHP01212 AL539_22935 IPR006638 Elongator protein 3/MiaB/NifB AL539_22935 IPR007197 Radical SAM AL539_22935 IPR023404 Radical SAM, alpha/beta horseshoe AL539_22935 IPR032432 AL539_22935 AL539_22940 IPR000014 PAS domain AL539_22940 IPR000160 GGDEF domain AL539_22940 IPR013656 PAS fold-4 AL539_22940 IPR029787 Nucleotide cyclase AL539_22940 IPR035965 AL539_22940 AL539_22945 IPR000014 PAS domain AL539_22945 IPR001789 Signal transduction response regulator, receiver domain AL539_22945 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_22945 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain AL539_22945 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AL539_22945 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain AL539_22945 IPR011006 CheY-like superfamily AL539_22945 IPR013656 PAS fold-4 AL539_22945 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB AL539_22945 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain AL539_22945 IPR035965 AL539_22945 AL539_22945 IPR036097 AL539_22945 AL539_22945 IPR036641 AL539_22945 AL539_22945 IPR036890 AL539_22945 AL539_22955 IPR001789 Signal transduction response regulator, receiver domain AL539_22955 IPR001867 Signal transduction response regulator, C-terminal AL539_22955 IPR011006 CheY-like superfamily AL539_22955 IPR016032 Signal transduction response regulator, C-terminal effector AL539_22955 IPR036388 AL539_22955 AL539_22965 IPR021710 Protein of unknown function DUF3293 AL539_22970 IPR005493 Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase AL539_22970 IPR010203 Regulator of ribonuclease activity A AL539_22970 IPR036704 AL539_22970 AL539_22975 IPR016895 Uncharacterised conserved protein UCP028680 AL539_22980 IPR011720 Thr operon leader peptide AL539_22985 IPR001048 Aspartate/glutamate/uridylate kinase AL539_22985 IPR001341 Aspartate kinase domain AL539_22985 IPR001342 Homoserine dehydrogenase, catalytic AL539_22985 IPR002912 ACT domain AL539_22985 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding AL539_22985 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I AL539_22985 IPR018042 Aspartate kinase, conserved site AL539_22985 IPR019811 Homoserine dehydrogenase, conserved site AL539_22985 IPR027795 GATS-like ACT domain AL539_22985 IPR036291 AL539_22985 AL539_22985 IPR036393 AL539_22985 AL539_22990 IPR000870 Homoserine kinase AL539_22990 IPR006203 GHMP kinase, ATP-binding, conserved site AL539_22990 IPR006204 GHMP kinase N-terminal domain AL539_22990 IPR013750 GHMP kinase, C-terminal domain AL539_22990 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AL539_22990 IPR020568 Ribosomal protein S5 domain 2-type fold AL539_22990 IPR036554 AL539_22990 AL539_22995 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site AL539_22995 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AL539_22995 IPR004450 Threonine synthase-like AL539_22995 IPR029144 Threonine synthase, N-terminal AL539_22995 IPR036052 AL539_22995 AL539_22995 IPR037158 AL539_22995 AL539_23000 IPR005025 NADPH-dependent FMN reductase-like AL539_23000 IPR029039 Flavoprotein-like AL539_23005 IPR001150 Glycine radical domain AL539_23005 IPR011140 Autonomous glycyl radical cofactor GrcA AL539_23005 IPR019777 Formate C-acetyltransferase glycine radical, conserved site AL539_23010 IPR001719 AP endonuclease 2 AL539_23010 IPR013022 Xylose isomerase-like, TIM barrel domain AL539_23010 IPR018246 AP endonuclease 2, zinc binding site AL539_23010 IPR036237 AL539_23010 AL539_23020 IPR002043 Uracil-DNA glycosylase AL539_23020 IPR005122 Uracil-DNA glycosylase-like AL539_23020 IPR018085 Uracil-DNA glycosylase, active site AL539_23020 IPR036895 AL539_23020 AL539_23025 IPR012312 Haemerythrin/HHE cation-binding motif AL539_23030 IPR021932 Protein of unknown function DUF3545 AL539_23035 IPR001463 Sodium:alanine symporter AL539_23040 IPR005583 Uncharacterised protein family UPF0246 AL539_23045 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site AL539_23045 IPR001650 Helicase, C-terminal AL539_23045 IPR011545 DEAD/DEAH box helicase domain AL539_23045 IPR014001 Helicase, superfamily 1/2, ATP-binding domain AL539_23045 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_23045 IPR028621 ATP-dependent RNA helicase SrmB AL539_23050 IPR002052 DNA methylase, N-6 adenine-specific, conserved site AL539_23050 IPR007848 Methyltransferase small domain AL539_23050 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase AL539_23050 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like AL539_23055 IPR004685 Branched-chain amino acid transport system II carrier protein AL539_23060 IPR001226 Flavodoxin, conserved site AL539_23060 IPR008254 Flavodoxin/nitric oxide synthase AL539_23060 IPR010086 Flavodoxin, long chain AL539_23060 IPR029039 Flavoprotein-like AL539_23065 IPR002104 Integrase, catalytic AL539_23065 IPR004107 Integrase, SAM-like, N-terminal AL539_23065 IPR010998 Integrase, Lambda-type, N-terminal AL539_23065 IPR011010 DNA breaking-rejoining enzyme, catalytic core AL539_23065 IPR011932 Tyrosine recombinase XerD AL539_23065 IPR013762 Integrase-like, catalytic core AL539_23065 IPR023009 Tyrosine recombinase XerC/XerD AL539_23070 IPR009094 Disulphide bond isomerase, DsbC, N-terminal AL539_23070 IPR012336 Thioredoxin-like fold AL539_23070 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal AL539_23070 IPR036249 AL539_23070 AL539_23075 IPR001667 DDH domain AL539_23075 IPR003156 DHHA1 domain AL539_23075 IPR004610 Bacterial RecJ exonuclease AL539_23075 IPR038763 AL539_23075 AL539_23085 IPR002313 Lysine-tRNA ligase, class II AL539_23085 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) AL539_23085 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type AL539_23085 IPR012340 Nucleic acid-binding, OB-fold AL539_23085 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal AL539_23090 IPR002078 RNA polymerase sigma factor 54 interaction domain AL539_23090 IPR002197 DNA binding HTH domain, Fis-type AL539_23090 IPR003593 AAA+ ATPase domain AL539_23090 IPR009057 Homeodomain-like AL539_23090 IPR011006 CheY-like superfamily AL539_23090 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AL539_23090 IPR025944 Sigma-54 interaction domain, conserved site AL539_23090 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_23100 IPR023210 NADP-dependent oxidoreductase domain AL539_23100 IPR036812 AL539_23100 AL539_23110 IPR004230 DNA mismatch repair protein MutH AL539_23110 IPR011335 Restriction endonuclease type II-like AL539_23110 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II AL539_23110 IPR037057 AL539_23110 AL539_23115 IPR000086 NUDIX hydrolase domain AL539_23115 IPR015797 NUDIX hydrolase domain-like AL539_23115 IPR020084 NUDIX hydrolase, conserved site AL539_23115 IPR020476 NUDIX hydrolase AL539_23115 IPR022927 RNA pyrophosphohydrolase RppH AL539_23120 IPR000121 PEP-utilising enzyme, C-terminal AL539_23120 IPR003018 GAF domain AL539_23120 IPR006318 Phosphoenolpyruvate-utilising enzyme AL539_23120 IPR008279 PEP-utilising enzyme, mobile domain AL539_23120 IPR008731 Phosphotransferase system, enzyme I N-terminal AL539_23120 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain AL539_23120 IPR018274 PEP-utilising enzyme, active site AL539_23120 IPR023151 PEP-utilising enzyme, conserved site AL539_23120 IPR029016 GAF domain-like AL539_23120 IPR036618 AL539_23120 AL539_23120 IPR036637 AL539_23120 AL539_23125 IPR002781 Transmembrane protein TauE like AL539_23130 IPR001640 Prolipoprotein diacylglyceryl transferase AL539_23135 IPR000398 Thymidylate synthase AL539_23135 IPR020940 Thymidylate synthase, active site AL539_23135 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain AL539_23135 IPR036926 AL539_23135 AL539_23140 IPR012548 Protein of unknown function DUF1704 AL539_23140 IPR012656 Conserved hypothetical protein CHP02421, QEGLA AL539_23145 IPR003841 Sodium-dependent phosphate transport protein AL539_23150 IPR000847 Transcription regulator HTH, LysR AL539_23150 IPR005119 LysR, substrate-binding AL539_23150 IPR036388 AL539_23150 AL539_23150 IPR036390 AL539_23150 AL539_23155 IPR001845 HTH ArsR-type DNA-binding domain AL539_23155 IPR036388 AL539_23155 AL539_23155 IPR036390 AL539_23155 AL539_23160 IPR002583 Ribosomal protein S20 AL539_23160 IPR036510 AL539_23160 AL539_23165 IPR004268 Flagellin assembly, membrane protein MviN AL539_23170 IPR002606 Riboflavin kinase, bacterial AL539_23170 IPR004821 Cytidyltransferase-like domain AL539_23170 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL539_23170 IPR015864 FAD synthetase AL539_23170 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic AL539_23170 IPR023465 Riboflavin kinase domain AL539_23175 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site AL539_23175 IPR002300 Aminoacyl-tRNA synthetase, class Ia AL539_23175 IPR002301 Isoleucine-tRNA ligase AL539_23175 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain AL539_23175 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding AL539_23175 IPR010663 Zinc finger, DNA glycosylase/AP lyase/isoleucyl tRNA synthetase AL539_23175 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding AL539_23175 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL539_23175 IPR023585 Isoleucine-tRNA ligase, type 1 AL539_23180 IPR001872 Peptidase A8, signal peptidase II AL539_23185 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain AL539_23190 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase AL539_23195 IPR023485 Phosphotyrosine protein phosphatase I superfamily AL539_23195 IPR036196 AL539_23195 AL539_23200 IPR001789 Signal transduction response regulator, receiver domain AL539_23200 IPR007492 LytTR DNA-binding domain AL539_23200 IPR011006 CheY-like superfamily AL539_23205 IPR003018 GAF domain AL539_23205 IPR010559 Signal transduction histidine kinase, internal region AL539_23205 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region AL539_23205 IPR029016 GAF domain-like AL539_23205 IPR036890 AL539_23205 AL539_23210 IPR003706 Carbon starvation protein CstA AL539_23210 IPR025299 CstA C-terminal domain AL539_23215 IPR021242 Protein of unknown function DUF2799 AL539_23225 IPR001347 Sugar isomerase (SIS) AL539_23225 IPR005486 Glucokinase regulatory protein, conserved site AL539_23225 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ AL539_23230 IPR005338 Anhydro-N-acetylmuramic acid kinase AL539_23235 IPR001764 Glycoside hydrolase, family 3, N-terminal AL539_23235 IPR017853 Glycoside hydrolase, superfamily AL539_23235 IPR019800 Glycoside hydrolase, family 3, active site AL539_23235 IPR022956 Beta-hexosaminidase, bacterial AL539_23235 IPR036962 AL539_23235 AL539_23240 IPR006218 DAHP synthetase I/KDSA AL539_23240 IPR006219 DHAP synthase, class 1 AL539_23240 IPR013785 Aldolase-type TIM barrel AL539_23245 IPR002701 Chorismate mutase AL539_23245 IPR003099 Prephenate dehydrogenase AL539_23245 IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein AL539_23245 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like AL539_23245 IPR011277 Chorismate mutase, T-protein AL539_23245 IPR036263 AL539_23245 AL539_23245 IPR036291 AL539_23245 AL539_23245 IPR036979 AL539_23245 AL539_23250 IPR011055 Duplicated hybrid motif AL539_23250 IPR016047 Peptidase M23 AL539_23255 IPR009875 PilZ domain AL539_23255 IPR027021 Cyclic di-GMP binding protein, PA4608 type AL539_23260 IPR003439 ABC transporter-like AL539_23260 IPR003593 AAA+ ATPase domain AL539_23260 IPR017871 ABC transporter, conserved site AL539_23260 IPR022374 ABC transporter, ATP-binding protein, ChvD AL539_23260 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_23260 IPR032781 AL539_23260 AL539_23265 IPR008258 Lytic transglycosylase-like SLT domain AL539_23265 IPR008939 Lytic transglycosylase, superhelical U-shaped AL539_23265 IPR012289 Lytic transglycosylase, superhelical linker AL539_23265 IPR023346 Lysozyme-like domain AL539_23265 IPR037061 AL539_23265 AL539_23270 IPR000831 Trp repressor AL539_23270 IPR010921 Trp repressor/replication initiator AL539_23270 IPR013335 Trp repressor, bacterial AL539_23270 IPR038116 AL539_23270 AL539_23275 IPR002786 Non-canonical purine NTP phosphatase AL539_23275 IPR026533 Non-canonical purine NTP phosphatase/PRRC1 AL539_23275 IPR029001 Inosine triphosphate pyrophosphatase-like AL539_23280 IPR001086 Prephenate dehydratase AL539_23280 IPR002701 Chorismate mutase AL539_23280 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase AL539_23280 IPR010952 Chorismate mutase, gammaproteobacteria AL539_23280 IPR018528 Prephenate dehydratase, conserved site AL539_23280 IPR036263 AL539_23280 AL539_23280 IPR036979 AL539_23280 AL539_23285 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein AL539_23285 IPR036567 AL539_23285 AL539_23290 IPR001638 Extracellular solute-binding protein, family 3 AL539_23290 IPR008258 Lytic transglycosylase-like SLT domain AL539_23290 IPR023346 Lysozyme-like domain AL539_23295 IPR011990 Tetratricopeptide-like helical domain AL539_23295 IPR017689 Outer membrane protein assembly factor BamD AL539_23295 IPR039565 AL539_23295 AL539_23300 IPR002942 RNA-binding S4 domain AL539_23300 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F AL539_23300 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site AL539_23300 IPR006225 Pseudouridine synthase, RluC/RluD AL539_23300 IPR020103 Pseudouridine synthase, catalytic domain AL539_23300 IPR036986 AL539_23300 AL539_23305 IPR003730 Multi-copper polyphenol oxidoreductase, laccase AL539_23305 IPR011324 Cytotoxic necrotizing factor-like, catalytic AL539_23305 IPR038371 AL539_23305 AL539_23310 IPR001270 ClpA/B family AL539_23310 IPR003593 AAA+ ATPase domain AL539_23310 IPR003959 ATPase, AAA-type, core AL539_23310 IPR004176 Clp, N-terminal AL539_23310 IPR017730 Chaperonin ClpB AL539_23310 IPR018368 ClpA/B, conserved site 1 AL539_23310 IPR019489 Clp ATPase, C-terminal AL539_23310 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_23310 IPR028299 ClpA/B, conserved site 2 AL539_23310 IPR036628 AL539_23310 AL539_23355 IPR014347 Tautomerase/MIF superfamily AL539_23355 IPR015017 Protein of unknown function DUF1904 AL539_23360 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase AL539_23360 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain AL539_23375 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AL539_23375 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL539_23380 IPR001539 Peptidase U32 AL539_23380 IPR032525 AL539_23380 AL539_23385 IPR007476 Putative exonuclease, RdgC AL539_23395 IPR001789 Signal transduction response regulator, receiver domain AL539_23395 IPR001867 Signal transduction response regulator, C-terminal AL539_23395 IPR011006 CheY-like superfamily AL539_23395 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB AL539_23395 IPR036388 AL539_23395 AL539_23400 IPR000014 PAS domain AL539_23400 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_23400 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain AL539_23400 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AL539_23400 IPR013767 PAS fold AL539_23400 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR AL539_23400 IPR021766 Protein of unknown function DUF3329 AL539_23400 IPR035965 AL539_23400 AL539_23400 IPR036097 AL539_23400 AL539_23400 IPR036890 AL539_23400 AL539_23405 IPR011862 Phosphate binding protein AL539_23405 IPR024370 PBP domain AL539_23410 IPR003695 Ppx/GppA phosphatase AL539_23410 IPR022371 Exopolyphosphatase AL539_23410 IPR030673 AL539_23410 AL539_23415 IPR003414 Polyphosphate kinase AL539_23415 IPR024953 Polyphosphate kinase middle domain AL539_23415 IPR025198 Polyphosphate kinase N-terminal domain AL539_23415 IPR025200 Polyphosphate kinase C-terminal domain AL539_23415 IPR036830 AL539_23415 AL539_23415 IPR036832 AL539_23415 AL539_23420 IPR000515 MetI-like domain AL539_23420 IPR035906 AL539_23420 AL539_23425 IPR000515 MetI-like domain AL539_23425 IPR005672 Phosphate transport system permease protein PstA AL539_23425 IPR035906 AL539_23425 AL539_23430 IPR003439 ABC transporter-like AL539_23430 IPR003593 AAA+ ATPase domain AL539_23430 IPR005670 Phosphate transport system permease protein 1 AL539_23430 IPR017871 ABC transporter, conserved site AL539_23430 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_23435 IPR026022 PhoU domain AL539_23435 IPR028366 Phosphate transport system protein PhoU AL539_23435 IPR038078 AL539_23435 AL539_23440 IPR016898 Polyphosphate kinase 2 AL539_23440 IPR022486 Polyphosphate kinase 2, PA0141 AL539_23440 IPR022488 Polyphosphate kinase-2-related AL539_23440 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_23445 IPR005627 Copper homeostasis protein CutC AL539_23445 IPR023648 Copper homeostasis CutC domain AL539_23445 IPR036822 AL539_23445 AL539_23450 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant AL539_23450 IPR019479 Peroxiredoxin, C-terminal AL539_23450 IPR024706 Peroxiredoxin, AhpC-type AL539_23450 IPR036249 AL539_23450 AL539_23455 IPR000847 Transcription regulator HTH, LysR AL539_23455 IPR005119 LysR, substrate-binding AL539_23455 IPR036388 AL539_23455 AL539_23455 IPR036390 AL539_23455 AL539_23460 IPR001465 Malate synthase AL539_23460 IPR006252 Malate synthase A AL539_23460 IPR011076 Malate synthase-like AL539_23460 IPR019830 Malate synthase, conserved site AL539_23465 IPR006254 Isocitrate lyase AL539_23465 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain AL539_23465 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site AL539_23470 IPR000644 CBS domain AL539_23475 IPR001254 Peptidase S1 AL539_23475 IPR001314 Peptidase S1A, chymotrypsin-type AL539_23475 IPR009003 Trypsin-like cysteine/serine peptidase domain AL539_23475 IPR018114 Peptidase S1, trypsin family, active site AL539_23475 IPR033116 AL539_23475 AL539_23480 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA AL539_23480 IPR036100 AL539_23480 AL539_23485 IPR002616 tRNA-guanine(15) transglycosylase-like AL539_23485 IPR004803 Queuine tRNA-ribosyltransferase AL539_23485 IPR036511 AL539_23485 AL539_23490 IPR003849 Preprotein translocase YajC AL539_23495 IPR001036 Acriflavin resistance protein AL539_23495 IPR005791 Protein translocase subunit SecD AL539_23495 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AL539_23495 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site AL539_23495 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial AL539_23495 IPR027398 SecD export protein N-terminal TM domain AL539_23500 IPR005665 Protein-export membrane protein SecF, bacterial AL539_23500 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AL539_23500 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site AL539_23500 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial AL539_23515 IPR000760 Inositol monophosphatase AL539_23515 IPR020550 Inositol monophosphatase, conserved site AL539_23515 IPR020583 Inositol monophosphatase, metal-binding site AL539_23515 IPR022337 Inositol monophosphatase, SuhB AL539_23520 IPR001537 tRNA/rRNA methyltransferase, SpoU type AL539_23520 IPR004384 RNA methyltransferase TrmH, group 1 AL539_23520 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AL539_23520 IPR029028 Alpha/beta knot methyltransferases AL539_23525 IPR000944 Transcription regulator Rrf2-like AL539_23525 IPR010242 Transcription factor HTH, IscR AL539_23525 IPR030489 AL539_23525 AL539_23525 IPR036388 AL539_23525 AL539_23525 IPR036390 AL539_23525 AL539_23530 IPR000192 Aminotransferase class V domain AL539_23530 IPR010240 Cysteine desulfurase AL539_23530 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 AL539_23530 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 AL539_23530 IPR015424 Pyridoxal phosphate-dependent transferase AL539_23530 IPR016454 Cysteine desulfurase, NifS AL539_23530 IPR020578 Aminotransferase class-V pyridoxal-phosphate binding site AL539_23535 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal AL539_23535 IPR011339 ISC system FeS cluster assembly, IscU scaffold AL539_23540 IPR000361 FeS cluster biogenesis AL539_23540 IPR011302 ISC system FeS cluster assembly, IscA scaffold AL539_23540 IPR016092 FeS cluster insertion protein AL539_23540 IPR017870 FeS cluster insertion, C-terminal, conserved site AL539_23540 IPR035903 AL539_23540 AL539_23545 IPR001623 DnaJ domain AL539_23545 IPR004640 Co-chaperone Hsc20 AL539_23545 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain AL539_23545 IPR036386 AL539_23545 AL539_23545 IPR036869 AL539_23545 AL539_23550 IPR010236 ISC system FeS cluster assembly, HscA chaperone AL539_23550 IPR013126 Heat shock protein 70 family AL539_23550 IPR018181 Heat shock protein 70, conserved site AL539_23550 IPR029047 Heat shock protein 70kD, peptide-binding domain AL539_23550 IPR029048 Heat shock protein 70kD, C-terminal domain AL539_23555 IPR001041 2Fe-2S ferredoxin-type domain AL539_23555 IPR001055 Adrenodoxin AL539_23555 IPR011536 Ferredoxin, 2Fe-2S type AL539_23555 IPR012675 Beta-grasp domain AL539_23555 IPR018298 Adrenodoxin, iron-sulphur binding site AL539_23555 IPR036010 AL539_23555 AL539_23560 IPR007479 ISC system FeS cluster assembly, IscX AL539_23560 IPR036762 AL539_23560 AL539_23565 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal AL539_23565 IPR008330 Peptidase M17, peptidase B AL539_23565 IPR011356 Leucine aminopeptidase/peptidase B AL539_23570 IPR001564 Nucleoside diphosphate kinase AL539_23570 IPR023005 Nucleoside diphosphate kinase, active site AL539_23570 IPR034907 AL539_23570 AL539_23570 IPR036850 AL539_23570 AL539_23575 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr AL539_23575 IPR007197 Radical SAM AL539_23575 IPR013785 Aldolase-type TIM barrel AL539_23575 IPR027492 Dual-specificity RNA methyltransferase RlmN AL539_23580 IPR001387 Cro/C1-type helix-turn-helix domain AL539_23580 IPR010982 Lambda repressor-like, DNA-binding domain AL539_23580 IPR025194 Domain of unknown function DUF4115 AL539_23585 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type AL539_23585 IPR011005 Dihydropteroate synthase-like AL539_23585 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial AL539_23590 IPR004154 Anticodon-binding AL539_23590 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit AL539_23590 IPR015807 Histidine-tRNA ligase AL539_23590 IPR036621 AL539_23590 AL539_23595 IPR011990 Tetratricopeptide-like helical domain AL539_23595 IPR018704 Domain of unknown function DUF09976 AL539_23595 IPR026039 Uncharacterised protein family UPF0070 AL539_23600 IPR002372 Pyrrolo-quinoline quinone repeat AL539_23600 IPR011047 Quinonprotein alcohol dehydrogenase-like superfamily AL539_23600 IPR015943 WD40/YVTN repeat-like-containing domain AL539_23600 IPR017687 Outer membrane protein assembly factor BamB AL539_23600 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AL539_23605 IPR003593 AAA+ ATPase domain AL539_23605 IPR005225 Small GTP-binding protein domain AL539_23605 IPR006073 GTP binding domain AL539_23605 IPR015946 K homology domain-like, alpha/beta AL539_23605 IPR016484 GTP-binding protein EngA AL539_23605 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_23605 IPR032859 AL539_23605 AL539_23610 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain AL539_23615 IPR010807 Protein of unknown function DUF1407 AL539_23615 IPR029037 YfgJ-like AL539_23620 IPR003753 Exonuclease VII, large subunit AL539_23620 IPR020579 Exonuclease VII, large subunit, C-terminal AL539_23620 IPR025824 OB-fold nucleic acid binding domain AL539_23625 IPR000644 CBS domain AL539_23625 IPR001093 IMP dehydrogenase/GMP reductase AL539_23625 IPR005990 Inosine-5'-monophosphate dehydrogenase AL539_23625 IPR013785 Aldolase-type TIM barrel AL539_23625 IPR015875 IMP dehydrogenase / GMP reductase, conserved site AL539_23630 IPR001674 GMP synthase, C-terminal AL539_23630 IPR004739 GMP synthase, N-terminal AL539_23630 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL539_23630 IPR017926 Glutamine amidotransferase AL539_23630 IPR022310 NAD/GMP synthase AL539_23630 IPR022955 GMP synthase AL539_23630 IPR029062 Class I glutamine amidotransferase-like AL539_23635 IPR018461 Na+/H+ antiporter, NhaC-like AL539_23640 IPR000726 Glycoside hydrolase, family 19, catalytic AL539_23640 IPR003610 Carbohydrate-binding module family 5/12 AL539_23640 IPR023346 Lysozyme-like domain AL539_23640 IPR036573 AL539_23640 AL539_23645 IPR000791 GPR1/FUN34/yaaH AL539_23650 IPR001463 Sodium:alanine symporter AL539_23655 IPR006076 FAD dependent oxidoreductase AL539_23655 IPR023080 D-amino acid dehydrogenase small subunit, DadA AL539_23655 IPR036188 AL539_23655 AL539_23660 IPR000847 Transcription regulator HTH, LysR AL539_23660 IPR005119 LysR, substrate-binding AL539_23660 IPR036388 AL539_23660 AL539_23660 IPR036390 AL539_23660 AL539_23665 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme AL539_23665 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase AL539_23665 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 AL539_23665 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 AL539_23665 IPR015424 Pyridoxal phosphate-dependent transferase AL539_23670 IPR005814 Aminotransferase class-III AL539_23670 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 AL539_23670 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 AL539_23670 IPR015424 Pyridoxal phosphate-dependent transferase AL539_23675 IPR008567 3-keto-5-aminohexanoate cleavage enzyme AL539_23675 IPR013785 Aldolase-type TIM barrel AL539_23680 IPR018461 Na+/H+ antiporter, NhaC-like AL539_23685 IPR032816 AL539_23685 AL539_23690 IPR000182 GNAT domain AL539_23690 IPR003010 Carbon-nitrogen hydrolase AL539_23690 IPR016181 Acyl-CoA N-acyltransferase AL539_23690 IPR036526 AL539_23690 AL539_23695 IPR000847 Transcription regulator HTH, LysR AL539_23695 IPR005119 LysR, substrate-binding AL539_23695 IPR036388 AL539_23695 AL539_23695 IPR036390 AL539_23695 AL539_23700 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel AL539_23700 IPR027385 Outer membrane protein beta-barrel AL539_23705 IPR002921 Fungal lipase-like domain AL539_23705 IPR029058 Alpha/Beta hydrolase fold AL539_23715 IPR014942 Protein of unknown function DUF1814 AL539_23720 IPR019238 Protein of unknown function DUF2186 AL539_23725 IPR004843 Calcineurin-like phosphoesterase domain, apaH type AL539_23725 IPR029052 Metallo-dependent phosphatase-like AL539_23730 IPR036390 AL539_23730 AL539_23735 IPR021316 Protein of unknown function DUF2913 AL539_23740 IPR001633 EAL domain AL539_23740 IPR035919 AL539_23740 AL539_23745 IPR000160 GGDEF domain AL539_23745 IPR001633 EAL domain AL539_23745 IPR029787 Nucleotide cyclase AL539_23745 IPR035919 AL539_23745 AL539_23750 IPR009057 Homeodomain-like AL539_23750 IPR014710 RmlC-like jelly roll fold AL539_23750 IPR018060 DNA binding HTH domain, AraC-type AL539_23750 IPR037923 AL539_23750 AL539_23755 IPR001633 EAL domain AL539_23755 IPR035919 AL539_23755 AL539_23765 IPR025948 HTH-like domain AL539_23770 IPR001584 Integrase, catalytic core AL539_23770 IPR012337 Ribonuclease H-like domain AL539_23775 IPR000160 GGDEF domain AL539_23775 IPR029787 Nucleotide cyclase AL539_23780 IPR001387 Cro/C1-type helix-turn-helix domain AL539_23780 IPR010982 Lambda repressor-like, DNA-binding domain AL539_23780 IPR011051 RmlC-like cupin domain AL539_23780 IPR013096 Cupin 2, conserved barrel AL539_23780 IPR014710 RmlC-like jelly roll fold AL539_23785 IPR005146 B3/B4 tRNA-binding domain AL539_23795 IPR002104 Integrase, catalytic AL539_23795 IPR011010 DNA breaking-rejoining enzyme, catalytic core AL539_23795 IPR013762 Integrase-like, catalytic core AL539_23815 IPR012893 HipA-like, C-terminal AL539_23815 IPR017508 HipA, N-terminal subdomain 1 AL539_23820 IPR029052 Metallo-dependent phosphatase-like AL539_23835 IPR025668 Transposase DDE domain AL539_23875 IPR006118 Recombinase, conserved site AL539_23875 IPR006119 Resolvase, N-terminal AL539_23875 IPR036162 AL539_23875 AL539_23880 IPR002725 Protein of unknown function DUF45 AL539_23885 IPR006935 Helicase/UvrB domain AL539_23885 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal AL539_23885 IPR014001 Helicase, superfamily 1/2, ATP-binding domain AL539_23885 IPR021810 Protein of unknown function DUF3387 AL539_23885 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_23890 IPR000055 Restriction endonuclease, type I, HsdS AL539_23895 IPR002052 DNA methylase, N-6 adenine-specific, conserved site AL539_23895 IPR003356 DNA methylase, adenine-specific AL539_23895 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain AL539_23895 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like AL539_23895 IPR038333 AL539_23895 AL539_23905 IPR003356 DNA methylase, adenine-specific AL539_23905 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like AL539_23910 IPR000055 Restriction endonuclease, type I, HsdS AL539_23915 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_23920 IPR010260 Bacteriophage P4, Orf88 AL539_23930 IPR002104 Integrase, catalytic AL539_23930 IPR004107 Integrase, SAM-like, N-terminal AL539_23930 IPR010998 Integrase, Lambda-type, N-terminal AL539_23930 IPR011010 DNA breaking-rejoining enzyme, catalytic core AL539_23930 IPR013762 Integrase-like, catalytic core AL539_23930 IPR025166 Domain of unknown function DUF4102 AL539_23930 IPR038488 AL539_23930 AL539_23940 IPR000037 SsrA-binding protein AL539_23940 IPR020081 SsrA-binding protein, conserved site AL539_23940 IPR023620 Small protein B AL539_23945 IPR005031 Streptomyces cyclase/dehydrase AL539_23945 IPR023393 START-like domain AL539_23950 IPR005346 RnfH protein AL539_23950 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp AL539_23950 IPR037021 AL539_23950 AL539_23955 IPR007450 Lipoprotein SmpA/OmlA AL539_23955 IPR026592 Outer membrane protein assembly factor BamE AL539_23955 IPR037873 AL539_23955 AL539_23960 IPR000182 GNAT domain AL539_23960 IPR016181 Acyl-CoA N-acyltransferase AL539_23965 IPR003395 RecF/RecN/SMC, N-terminal AL539_23965 IPR004604 DNA recombination/repair protein RecN AL539_23965 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_23970 IPR021452 Protein of unknown function DUF3103 AL539_23975 IPR002504 Inorganic polyphosphate/ATP-NAD kinase AL539_23975 IPR016064 ATP-NAD kinase-like domain AL539_23975 IPR017437 ATP-NAD kinase, PpnK-type, all-beta AL539_23975 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 AL539_23980 IPR000740 GrpE nucleotide exchange factor AL539_23980 IPR009012 GrpE nucleotide exchange factor, head AL539_23980 IPR013805 GrpE nucleotide exchange factor, coiled-coil AL539_23985 IPR001991 Sodium:dicarboxylate symporter AL539_23985 IPR036458 AL539_23985 AL539_23990 IPR012725 Chaperone DnaK AL539_23990 IPR013126 Heat shock protein 70 family AL539_23990 IPR018181 Heat shock protein 70, conserved site AL539_23990 IPR029047 Heat shock protein 70kD, peptide-binding domain AL539_23990 IPR029048 Heat shock protein 70kD, C-terminal domain AL539_23995 IPR001305 Heat shock protein DnaJ, cysteine-rich domain AL539_23995 IPR001623 DnaJ domain AL539_23995 IPR002939 Chaperone DnaJ, C-terminal AL539_23995 IPR008971 HSP40/DnaJ peptide-binding AL539_23995 IPR012724 Chaperone DnaJ AL539_23995 IPR018253 DnaJ domain, conserved site AL539_23995 IPR036410 AL539_23995 AL539_23995 IPR036869 AL539_23995 AL539_24000 IPR012902 Prokaryotic N-terminal methylation site AL539_24000 IPR031982 AL539_24000 AL539_24005 IPR012902 Prokaryotic N-terminal methylation site AL539_24005 IPR016824 Tfp pilus assembly protein FimT AL539_24005 IPR022346 General secretion pathway, GspH AL539_24010 IPR016419 Prepilin peptidase-dependent protein B, predicted AL539_24020 IPR012902 Prokaryotic N-terminal methylation site AL539_24025 IPR004697 AbgT AL539_24030 IPR016192 APOBEC/CMP deaminase, zinc-binding AL539_24030 IPR016193 Cytidine deaminase-like AL539_24030 IPR028883 tRNA-specific adenosine deaminase AL539_24040 IPR000189 Prokaryotic transglycosylase, active site AL539_24040 IPR001638 Extracellular solute-binding protein, family 3 AL539_24040 IPR008258 Lytic transglycosylase-like SLT domain AL539_24040 IPR023346 Lysozyme-like domain AL539_24040 IPR023703 Membrane-bound lytic murein transglycosylase F AL539_24045 IPR010073 Phosphoribosylformylglycinamidine synthase AL539_24045 IPR010918 AIR synthase-related protein, C-terminal domain AL539_24045 IPR029062 Class I glutamine amidotransferase-like AL539_24045 IPR036604 AL539_24045 AL539_24045 IPR036676 AL539_24045 AL539_24045 IPR036921 AL539_24045 AL539_24050 IPR022069 Protein of unknown function DUF3622 AL539_24060 IPR000531 TonB-dependent receptor, beta-barrel AL539_24060 IPR012910 TonB-dependent receptor, plug AL539_24060 IPR036942 AL539_24060 AL539_24060 IPR037066 AL539_24060 AL539_24065 IPR007036 Succinylglutamate desuccinylase/aspartoacylase AL539_24070 IPR021768 Protein of unknown function DUF3332 AL539_24075 IPR001160 Peptidase M20C, Xaa-His dipeptidase AL539_24075 IPR002933 Peptidase M20 AL539_24075 IPR011650 Peptidase M20, dimerisation domain AL539_24080 IPR006043 Xanthine/uracil/vitamin C permease AL539_24080 IPR026033 Purine permease PbuG-like AL539_24085 IPR000836 Phosphoribosyltransferase domain AL539_24085 IPR023747 Xanthine-guanine phosphoribosyltransferase AL539_24085 IPR029057 Phosphoribosyltransferase-like AL539_24090 IPR010520 Protein of unknown function DUF1100, hydrolase-like AL539_24090 IPR029058 Alpha/Beta hydrolase fold AL539_24095 IPR009986 Sigma factor-binding protein Crl AL539_24095 IPR038208 AL539_24095 AL539_24100 IPR001048 Aspartate/glutamate/uridylate kinase AL539_24100 IPR001057 Glutamate/acetylglutamate kinase AL539_24100 IPR002478 PUA domain AL539_24100 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase AL539_24100 IPR011529 Glutamate 5-kinase AL539_24100 IPR015947 PUA-like domain AL539_24100 IPR019797 Glutamate 5-kinase, conserved site AL539_24100 IPR036393 AL539_24100 AL539_24100 IPR036974 AL539_24100 AL539_24105 IPR000965 Gamma-glutamyl phosphate reductase GPR AL539_24105 IPR012134 Glutamate-5-semialdehyde dehydrogenase AL539_24105 IPR015590 Aldehyde dehydrogenase domain AL539_24105 IPR016161 Aldehyde/histidinol dehydrogenase AL539_24105 IPR016162 Aldehyde dehydrogenase, N-terminal AL539_24105 IPR016163 Aldehyde dehydrogenase, C-terminal AL539_24105 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site AL539_24110 IPR003796 Ribonucleotide reductase regulator NrdR-like AL539_24110 IPR005144 ATP-cone AL539_24115 IPR002125 CMP/dCMP deaminase, zinc-binding AL539_24115 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal AL539_24115 IPR004794 Riboflavin biosynthesis protein RibD AL539_24115 IPR011549 Riboflavin-specific deaminase, C-terminal AL539_24115 IPR016192 APOBEC/CMP deaminase, zinc-binding AL539_24115 IPR016193 Cytidine deaminase-like AL539_24115 IPR024072 Dihydrofolate reductase-like domain AL539_24120 IPR001783 Lumazine-binding protein AL539_24120 IPR017938 Riboflavin synthase-like beta-barrel AL539_24120 IPR023366 ATP synthase subunit alpha-like domain AL539_24120 IPR026017 Lumazine-binding domain AL539_24125 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB AL539_24125 IPR017945 DHBP synthase RibB-like alpha/beta domain AL539_24125 IPR032677 AL539_24125 AL539_24125 IPR036144 AL539_24125 AL539_24130 IPR002180 6,7-dimethyl-8-ribityllumazine synthase AL539_24130 IPR034964 AL539_24130 AL539_24130 IPR036467 AL539_24130 AL539_24135 IPR006027 NusB/RsmB/TIM44 AL539_24135 IPR011605 NusB antitermination factor AL539_24135 IPR035926 AL539_24135 AL539_24140 IPR006283 Thiamine-monophosphate kinase AL539_24140 IPR010918 AIR synthase-related protein, C-terminal domain AL539_24140 IPR016188 PurM, N-terminal-like AL539_24140 IPR036676 AL539_24140 AL539_24140 IPR036921 AL539_24140 AL539_24145 IPR007686 YutG/PgpA domain AL539_24145 IPR026037 Phosphatidylglycerophosphatase A AL539_24145 IPR036681 AL539_24145 AL539_24150 IPR005474 Transketolase, N-terminal AL539_24150 IPR005475 Transketolase-like, pyrimidine-binding domain AL539_24150 IPR005477 Deoxyxylulose-5-phosphate synthase AL539_24150 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II AL539_24150 IPR020826 Transketolase binding site AL539_24150 IPR029061 Thiamin diphosphate-binding fold AL539_24150 IPR033248 AL539_24150 AL539_24155 IPR000092 Polyprenyl synthetase AL539_24155 IPR008949 Terpenoid synthase AL539_24155 IPR033749 AL539_24155 AL539_24160 IPR003761 Exonuclease VII, small subunit AL539_24160 IPR037004 AL539_24160 AL539_24165 IPR000540 Flagellar motor protein MotA, conserved site AL539_24165 IPR002898 MotA/TolQ/ExbB proton channel AL539_24170 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal AL539_24170 IPR025713 Motility protein B, N-terminal domain AL539_24170 IPR036737 AL539_24170 AL539_24175 IPR003720 tRNA sulfurtransferase ThiI AL539_24175 IPR004114 THUMP AL539_24175 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL539_24175 IPR020536 Thil, AANH domain AL539_24175 IPR026340 Thiazole biosynthesis domain AL539_24175 IPR036873 AL539_24175 AL539_24180 IPR000847 Transcription regulator HTH, LysR AL539_24180 IPR005119 LysR, substrate-binding AL539_24180 IPR036388 AL539_24180 AL539_24180 IPR036390 AL539_24180 AL539_24185 IPR029058 Alpha/Beta hydrolase fold AL539_24190 IPR006696 Protein of unknown function DUF423 AL539_24195 IPR002877 Ribosomal RNA methyltransferase FtsJ domain AL539_24195 IPR011224 Ribosomal RNA large subunit methyltransferase M AL539_24195 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like AL539_24200 IPR002421 5'-3' exonuclease, N-terminal AL539_24200 IPR008918 Helix-hairpin-helix motif, class 2 AL539_24200 IPR020045 5'-3' exonuclease, C-terminal domain AL539_24200 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal AL539_24200 IPR022895 Flap endonuclease Xni AL539_24200 IPR029060 PIN domain-like AL539_24200 IPR036279 AL539_24200 AL539_24205 IPR021826 Protein of unknown function DUF3412 AL539_24205 IPR027820 Domain of unknown function DUF4478 AL539_24205 IPR031100 AL539_24205 AL539_24205 IPR037153 AL539_24205 AL539_24210 IPR000160 GGDEF domain AL539_24210 IPR029787 Nucleotide cyclase AL539_24215 IPR011990 Tetratricopeptide-like helical domain AL539_24215 IPR019734 Tetratricopeptide repeat AL539_24220 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 AL539_24220 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal AL539_24220 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF AL539_24225 IPR009948 Syd AL539_24225 IPR038228 AL539_24225 AL539_24230 IPR016908 Uncharacterised conserved protein UCP029037 AL539_24235 IPR004872 Lipoprotein NlpA family AL539_24240 IPR000515 MetI-like domain AL539_24240 IPR035906 AL539_24240 AL539_24245 IPR003439 ABC transporter-like AL539_24245 IPR003593 AAA+ ATPase domain AL539_24245 IPR012692 ABC transporter, methionine import, ATP-binding protein MetN, proteobacteria AL539_24245 IPR017871 ABC transporter, conserved site AL539_24245 IPR018449 NIL domain AL539_24245 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_24250 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase AL539_24250 IPR006543 Histidinol-phosphate phosphatase AL539_24250 IPR006549 HAD-superfamily hydrolase,subfamily IIIA AL539_24250 IPR023214 HAD-like domain AL539_24250 IPR036412 AL539_24250 AL539_24255 IPR000843 Transcription regulator HTH, LacI AL539_24255 IPR010982 Lambda repressor-like, DNA-binding domain AL539_24255 IPR012771 Trehalose operon repressor AL539_24255 IPR028082 Periplasmic binding protein-like I AL539_24260 IPR001996 Phosphotransferase system, IIB component, type 1 AL539_24260 IPR003352 Phosphotransferase system, EIIC AL539_24260 IPR011296 Phosphotransferase system, trehalose-specific IIBC component AL539_24260 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site AL539_24260 IPR036878 AL539_24260 AL539_24265 IPR006047 Glycosyl hydrolase, family 13, catalytic domain AL539_24265 IPR012769 Trehalose-6-phosphate hydrolase AL539_24265 IPR013780 Glycosyl hydrolase, family 13, all-beta AL539_24265 IPR017853 Glycoside hydrolase, superfamily AL539_24265 IPR032091 AL539_24265 AL539_24275 IPR001867 Signal transduction response regulator, C-terminal AL539_24275 IPR016032 Signal transduction response regulator, C-terminal effector AL539_24275 IPR036388 AL539_24275 AL539_24280 IPR003740 Membrane Protein of unknown function DUF161 AL539_24285 IPR001085 Serine hydroxymethyltransferase AL539_24285 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 AL539_24285 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 AL539_24285 IPR015424 Pyridoxal phosphate-dependent transferase AL539_24285 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site AL539_24285 IPR039429 AL539_24285 AL539_24290 IPR003698 Lipoyl synthase AL539_24290 IPR006638 Elongator protein 3/MiaB/NifB AL539_24290 IPR007197 Radical SAM AL539_24290 IPR013785 Aldolase-type TIM barrel AL539_24290 IPR031691 AL539_24290 AL539_24295 IPR000544 Octanoyltransferase AL539_24295 IPR004143 Biotin/lipoate A/B protein ligase AL539_24295 IPR020605 Octanoyltransferase, conserved site AL539_24300 IPR007454 Uncharacterised protein family UPF0250 AL539_24300 IPR027471 YbeD-like domain AL539_24305 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal AL539_24305 IPR012338 Beta-lactamase/transpeptidase-like AL539_24305 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal AL539_24305 IPR015956 Penicillin-binding protein-associated AL539_24305 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A AL539_24305 IPR037167 AL539_24305 AL539_24310 IPR007730 Sporulation-related domain AL539_24310 IPR009009 RlpA-like double-psi beta-barrel domain AL539_24310 IPR012997 Rare lipoprotein A, bacterial AL539_24310 IPR034718 AL539_24310 AL539_24310 IPR036680 AL539_24310 AL539_24310 IPR036908 AL539_24310 AL539_24315 IPR001182 Cell cycle protein FtsW/RodA AL539_24315 IPR011923 Rod shape-determining protein RodA AL539_24315 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site AL539_24320 IPR001460 Penicillin-binding protein, transpeptidase AL539_24320 IPR005311 Penicillin-binding protein, dimerisation domain AL539_24320 IPR012338 Beta-lactamase/transpeptidase-like AL539_24320 IPR017790 Penicillin-binding protein 2 AL539_24320 IPR036138 AL539_24320 AL539_24325 IPR003742 SPOUT methyltransferase, predicted AL539_24325 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AL539_24325 IPR029028 Alpha/beta knot methyltransferases AL539_24330 IPR004394 Protein Iojap/ribosomal silencing factor RsfS AL539_24335 IPR005790 DNA polymerase III, delta subunit AL539_24335 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal AL539_24335 IPR010372 DNA polymerase III, delta AL539_24335 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_24335 IPR032780 AL539_24335 AL539_24340 IPR007485 Lipopolysaccharide assembly, LptE AL539_24345 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site AL539_24345 IPR002300 Aminoacyl-tRNA synthetase, class Ia AL539_24345 IPR002302 Leucine-tRNA ligase AL539_24345 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain AL539_24345 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding AL539_24345 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding AL539_24345 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL539_24345 IPR025709 Leucyl-tRNA synthetase, editing domain AL539_24350 IPR009912 Protein of unknown function DUF1451 AL539_24355 IPR003010 Carbon-nitrogen hydrolase AL539_24355 IPR004563 Apolipoprotein N-acyltransferase AL539_24355 IPR036526 AL539_24355 AL539_24360 IPR000644 CBS domain AL539_24360 IPR005170 Transporter-associated domain AL539_24360 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 AL539_24360 IPR036318 AL539_24360 AL539_24365 IPR002036 Endoribonuclease YbeY AL539_24365 IPR020549 Endoribonuclease YbeY, conserved site AL539_24365 IPR023091 Metalloprotease catalytic domain, predicted AL539_24370 IPR003714 PhoH-like protein AL539_24370 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_24375 IPR002792 TRAM domain AL539_24375 IPR005839 Methylthiotransferase AL539_24375 IPR006463 tRNA-i(6)A37 modification enzyme MiaB AL539_24375 IPR006638 Elongator protein 3/MiaB/NifB AL539_24375 IPR007197 Radical SAM AL539_24375 IPR013848 Methylthiotransferase, N-terminal AL539_24375 IPR020612 Methylthiotransferase, conserved site AL539_24375 IPR023404 Radical SAM, alpha/beta horseshoe AL539_24375 IPR038135 AL539_24375 AL539_24385 IPR002938 Monooxygenase, FAD-binding AL539_24385 IPR010971 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/UbiI/COQ6 AL539_24385 IPR036188 AL539_24385 AL539_24495 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 AL539_24495 IPR006073 GTP binding domain AL539_24495 IPR012675 Beta-grasp domain AL539_24495 IPR012676 TGS-like AL539_24495 IPR013029 Domain of unknown function DUF933 AL539_24495 IPR023192 TGS-like domain AL539_24495 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_24500 IPR001328 Peptidyl-tRNA hydrolase AL539_24500 IPR018171 Peptidyl-tRNA hydrolase, conserved site AL539_24500 IPR036416 AL539_24500 AL539_24505 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site AL539_24505 IPR005946 Ribose-phosphate diphosphokinase AL539_24505 IPR029057 Phosphoribosyltransferase-like AL539_24505 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain AL539_24505 IPR037515 AL539_24505 AL539_24510 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase AL539_24510 IPR006204 GHMP kinase N-terminal domain AL539_24510 IPR013750 GHMP kinase, C-terminal domain AL539_24510 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AL539_24510 IPR020568 Ribosomal protein S5 domain 2-type fold AL539_24510 IPR036554 AL539_24510 AL539_24515 IPR004565 Outer membrane lipoprotein LolB AL539_24515 IPR029046 Lipoprotein localisation LolA/LolB/LppX AL539_24520 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase AL539_24520 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase AL539_24520 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal AL539_24520 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain AL539_24520 IPR018214 Glutamyl-tRNA reductase, conserved site AL539_24520 IPR036291 AL539_24520 AL539_24520 IPR036343 AL539_24520 AL539_24520 IPR036453 AL539_24520 AL539_24525 IPR000352 Peptide chain release factor class I/class II AL539_24525 IPR004373 Peptide chain release factor 1 AL539_24525 IPR005139 Peptide chain release factor AL539_24530 IPR002052 DNA methylase, N-6 adenine-specific, conserved site AL539_24530 IPR004556 Modification methylase HemK AL539_24530 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific AL539_24530 IPR025714 Methyltransferase domain AL539_24530 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like AL539_24535 IPR007360 Invasion gene expression up-regulator, SirB AL539_24540 IPR032698 AL539_24540 AL539_24545 IPR006218 DAHP synthetase I/KDSA AL539_24545 IPR006269 3-deoxy-8-phosphooctulonate synthase AL539_24545 IPR013785 Aldolase-type TIM barrel AL539_24550 IPR004843 Calcineurin-like phosphoesterase domain, apaH type AL539_24550 IPR006146 5'-Nucleotidase, conserved site AL539_24550 IPR006179 5'-Nucleotidase/apyrase AL539_24550 IPR008334 5'-Nucleotidase, C-terminal AL539_24550 IPR029052 Metallo-dependent phosphatase-like AL539_24550 IPR036907 AL539_24550 AL539_24555 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC AL539_24555 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain AL539_24555 IPR036754 AL539_24555 AL539_24560 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F AL539_24560 IPR002942 RNA-binding S4 domain AL539_24560 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F AL539_24560 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site AL539_24560 IPR020103 Pseudouridine synthase, catalytic domain AL539_24560 IPR036986 AL539_24560 AL539_24565 IPR002625 Smr protein/MutS2 C-terminal AL539_24565 IPR036063 AL539_24565 AL539_24570 IPR021494 Protein of unknown function DUF3149 AL539_24585 IPR002816 Pheromone shutdown, TraB AL539_24590 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain AL539_24590 IPR004867 Chitobiase/beta-hexosaminidase C-terminal domain AL539_24590 IPR008965 Carbohydrate-binding domain AL539_24590 IPR012291 Cellulose-binding family II/chitobiase, carbohydrate-binding domain AL539_24590 IPR013783 Immunoglobulin-like fold AL539_24590 IPR014756 Immunoglobulin E-set AL539_24590 IPR015882 Beta-hexosaminidase, bacteial type, N-terminal AL539_24590 IPR015883 Glycoside hydrolase family 20, catalytic core AL539_24590 IPR017853 Glycoside hydrolase, superfamily AL539_24590 IPR025705 Beta-hexosaminidase AL539_24590 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like AL539_24595 IPR009331 Oligogalacturonate-specific porin AL539_24600 IPR007332 Protein of unknown function DUF411 AL539_24605 IPR001757 Cation-transporting P-type ATPase AL539_24605 IPR006121 Heavy metal-associated domain, HMA AL539_24605 IPR008250 P-type ATPase, A domain AL539_24605 IPR017969 Heavy-metal-associated, conserved site AL539_24605 IPR018303 P-type ATPase, phosphorylation site AL539_24605 IPR023214 HAD-like domain AL539_24605 IPR023298 P-type ATPase, transmembrane domain AL539_24605 IPR023299 P-type ATPase, cytoplasmic domain N AL539_24605 IPR027256 Cation-transporting P-type ATPase, subfamily IB AL539_24605 IPR036163 AL539_24605 AL539_24605 IPR036412 AL539_24605 AL539_24615 IPR023614 Porin domain AL539_24620 IPR018635 Uncharacterised protein family UPF0319 AL539_24625 IPR000924 Glutamyl/glutaminyl-tRNA synthetase AL539_24625 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site AL539_24625 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial AL539_24625 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding AL539_24625 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL539_24625 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain AL539_24625 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 AL539_24630 IPR000498 Outer membrane protein, OmpA-like, transmembrane domain AL539_24630 IPR006664 Outer membrane protein, bacterial AL539_24630 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal AL539_24630 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel AL539_24630 IPR036737 AL539_24630 AL539_24645 IPR032370 AL539_24645 AL539_24645 IPR032386 AL539_24645 AL539_24645 IPR032388 AL539_24645 AL539_24645 IPR038165 AL539_24645 AL539_24645 IPR038180 AL539_24645 AL539_24650 IPR014549 Uncharacterised conserved integral membrane protein AL539_24655 IPR007293 Protein of unknown function UCP028687 AL539_24655 IPR024952 Lipoprotein LPP20-like AL539_24660 IPR007809 FlgN-like domain AL539_24660 IPR036679 AL539_24660 AL539_24665 IPR007412 Anti-sigma-28 factor, FlgM AL539_24665 IPR031316 AL539_24665 AL539_24665 IPR035890 AL539_24665 AL539_24670 IPR013974 SAF domain AL539_24670 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal AL539_24675 IPR001789 Signal transduction response regulator, receiver domain AL539_24675 IPR002545 CheW-like protein AL539_24675 IPR011006 CheY-like superfamily AL539_24675 IPR024181 Chemotaxis response regulator CheV AL539_24675 IPR036061 AL539_24675 AL539_24680 IPR000780 MCP methyltransferase, CheR-type AL539_24680 IPR022641 MCP methyltransferase, CheR-type, all-alpha domain, N-terminal AL539_24680 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal AL539_24680 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like AL539_24680 IPR036804 AL539_24680 AL539_24685 IPR006300 Flagellar basal-body rod protein FlgB AL539_24690 IPR001444 Flagellar basal body rod protein, N-terminal AL539_24690 IPR006299 Flagellar basal-body rod protein FlgC AL539_24690 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AL539_24690 IPR019776 Flagellar basal body rod protein, conserved site AL539_24695 IPR005648 Flagellar hook capping protein AL539_24695 IPR025963 FlgD Tudor-like domain AL539_24695 IPR025965 FlgD Ig-like domain AL539_24700 IPR001444 Flagellar basal body rod protein, N-terminal AL539_24700 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AL539_24700 IPR011491 Flagellar basal body FlaE AL539_24700 IPR019776 Flagellar basal body rod protein, conserved site AL539_24700 IPR020013 Fagellar hook-basal body protein, FlgE/F/G AL539_24700 IPR037058 AL539_24700 AL539_24700 IPR037925 AL539_24700 AL539_24705 IPR001444 Flagellar basal body rod protein, N-terminal AL539_24705 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AL539_24705 IPR012836 Flagellar basal-body rod FlgF AL539_24705 IPR020013 Fagellar hook-basal body protein, FlgE/F/G AL539_24705 IPR037925 AL539_24705 AL539_24710 IPR001444 Flagellar basal body rod protein, N-terminal AL539_24710 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AL539_24710 IPR012834 Flagellar basal-body rod FlgG AL539_24710 IPR019776 Flagellar basal body rod protein, conserved site AL539_24710 IPR020013 Fagellar hook-basal body protein, FlgE/F/G AL539_24710 IPR037925 AL539_24710 AL539_24715 IPR000527 Flagellar L-ring protein AL539_24720 IPR001782 Flagellar P-ring protein AL539_24725 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain AL539_24725 IPR013377 Flagellar rod assembly protein/muramidase FlgJ AL539_24725 IPR019301 Flagellar protein FlgJ, N-terminal AL539_24730 IPR002371 Flagellar hook-associated protein, FlgK AL539_24730 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AL539_24735 IPR001029 Flagellin, D0/D1 domain AL539_24735 IPR013384 Flagellar hook-associated protein 3 AL539_24740 IPR001029 Flagellin, D0/D1 domain AL539_24740 IPR001492 Flagellin AL539_24740 IPR010810 Flagellin hook, IN motif AL539_24750 IPR001029 Flagellin, D0/D1 domain AL539_24750 IPR001492 Flagellin AL539_24750 IPR010810 Flagellin hook, IN motif AL539_24755 IPR001029 Flagellin, D0/D1 domain AL539_24755 IPR001492 Flagellin AL539_24755 IPR010810 Flagellin hook, IN motif AL539_24760 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 AL539_24760 IPR011055 Duplicated hybrid motif AL539_24765 IPR000121 PEP-utilising enzyme, C-terminal AL539_24765 IPR006318 Phosphoenolpyruvate-utilising enzyme AL539_24765 IPR008279 PEP-utilising enzyme, mobile domain AL539_24765 IPR008731 Phosphotransferase system, enzyme I N-terminal AL539_24765 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain AL539_24765 IPR018274 PEP-utilising enzyme, active site AL539_24765 IPR023151 PEP-utilising enzyme, conserved site AL539_24765 IPR024692 Phosphotransferase system, enzyme I AL539_24765 IPR036618 AL539_24765 AL539_24765 IPR036637 AL539_24765 AL539_24770 IPR000032 Phosphocarrier HPr protein-like AL539_24770 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site AL539_24770 IPR002114 Phosphotransferase system, HPr serine phosphorylation site AL539_24770 IPR035895 AL539_24770 AL539_24780 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site AL539_24780 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AL539_24780 IPR005856 Cysteine synthase K/M AL539_24780 IPR005859 Cysteine synthase A AL539_24780 IPR036052 AL539_24780 AL539_24785 IPR022985 CysZ, gammaproteobacteria AL539_24790 IPR007449 ZipA, C-terminal FtsZ-binding domain AL539_24790 IPR011919 Cell division protein ZipA AL539_24790 IPR036765 AL539_24790 AL539_24795 IPR001357 BRCT domain AL539_24795 IPR001679 NAD-dependent DNA ligase AL539_24795 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 AL539_24795 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type AL539_24795 IPR004150 NAD-dependent DNA ligase, OB-fold AL539_24795 IPR010994 RuvA domain 2-like AL539_24795 IPR012340 Nucleic acid-binding, OB-fold AL539_24795 IPR013839 NAD-dependent DNA ligase, adenylation AL539_24795 IPR013840 NAD-dependent DNA ligase, N-terminal AL539_24795 IPR018239 NAD-dependent DNA ligase, active site AL539_24795 IPR033136 AL539_24795 AL539_24795 IPR036420 AL539_24795 AL539_24800 IPR023614 Porin domain AL539_24810 IPR002810 NfeD-like, C-terminal domain AL539_24815 IPR001107 Band 7 protein AL539_24815 IPR001972 Stomatin family AL539_24815 IPR018080 Band 7/stomatin-like, conserved site AL539_24815 IPR032435 AL539_24815 AL539_24815 IPR036013 AL539_24815 AL539_24820 IPR011990 Tetratricopeptide-like helical domain AL539_24820 IPR013766 Thioredoxin domain AL539_24820 IPR036249 AL539_24820 AL539_24820 IPR036743 AL539_24820 AL539_24830 IPR002347 Glucose/ribitol dehydrogenase AL539_24830 IPR020904 Short-chain dehydrogenase/reductase, conserved site AL539_24830 IPR036291 AL539_24830 AL539_24835 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain AL539_24835 IPR010099 Sugar nucleotide epimerase YfcH,-like putative AL539_24835 IPR013549 Domain of unknown function DUF1731 AL539_24835 IPR036291 AL539_24835 AL539_24840 IPR011435 Protein of unknown function DUF1538 AL539_24845 IPR011435 Protein of unknown function DUF1538 AL539_24850 IPR002187 Nitrogen regulatory protein PII AL539_24850 IPR011322 Nitrogen regulatory PII-like, alpha/beta AL539_24850 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal AL539_24855 IPR000644 CBS domain AL539_24865 IPR000979 Phosphodiesterase MJ0936/Vps29 AL539_24865 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type AL539_24865 IPR029052 Metallo-dependent phosphatase-like AL539_24870 IPR011893 Selenoprotein, Rdx type AL539_24870 IPR036249 AL539_24870 AL539_24875 IPR002781 Transmembrane protein TauE like AL539_24880 IPR035288 AL539_24880 AL539_24885 IPR001867 Signal transduction response regulator, C-terminal AL539_24885 IPR016032 Signal transduction response regulator, C-terminal effector AL539_24885 IPR036388 AL539_24885 AL539_24890 IPR001404 Heat shock protein Hsp90 family AL539_24890 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_24890 IPR019805 Heat shock protein Hsp90, conserved site AL539_24890 IPR020568 Ribosomal protein S5 domain 2-type fold AL539_24890 IPR020575 Heat shock protein Hsp90, N-terminal AL539_24890 IPR036890 AL539_24890 AL539_24890 IPR037196 AL539_24890 AL539_24895 IPR000850 Adenylate kinase/UMP-CMP kinase AL539_24895 IPR006259 Adenylate kinase subfamily AL539_24895 IPR007862 Adenylate kinase, active site lid domain AL539_24895 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_24895 IPR033690 AL539_24895 AL539_24900 IPR001015 Ferrochelatase AL539_24900 IPR019772 Ferrochelatase, active site AL539_24905 IPR000109 Proton-dependent oligopeptide transporter family AL539_24905 IPR005279 Amino acid/peptide transporter family AL539_24905 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site AL539_24905 IPR036259 AL539_24905 AL539_24910 IPR006645 NusG, N-terminal AL539_24910 IPR008991 Translation protein SH3-like domain AL539_24910 IPR010215 Transcription antitermination protein RfaH AL539_24910 IPR036735 AL539_24910 AL539_24915 IPR001962 Asparagine synthase AL539_24915 IPR006426 Asparagine synthase, glutamine-hydrolyzing AL539_24915 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL539_24915 IPR017932 Glutamine amidotransferase type 2 domain AL539_24915 IPR029055 Nucleophile aminohydrolases, N-terminal AL539_24920 IPR003148 Regulator of K+ conductance, N-terminal AL539_24920 IPR006153 Cation/H+ exchanger AL539_24920 IPR036291 AL539_24920 AL539_24920 IPR038770 AL539_24920 AL539_24925 IPR000600 ROK AL539_24925 IPR036388 AL539_24925 AL539_24925 IPR036390 AL539_24925 AL539_24930 IPR003764 N-acetylglucosamine-6-phosphate deacetylase AL539_24930 IPR006680 Amidohydrolase 1 AL539_24930 IPR011059 Metal-dependent hydrolase, composite domain AL539_24930 IPR032466 AL539_24930 AL539_24940 IPR001996 Phosphotransferase system, IIB component, type 1 AL539_24940 IPR003352 Phosphotransferase system, EIIC AL539_24940 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component AL539_24940 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site AL539_24940 IPR036878 AL539_24940 AL539_24945 IPR000924 Glutamyl/glutaminyl-tRNA synthetase AL539_24945 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site AL539_24945 IPR004514 Glutamine-tRNA synthetase AL539_24945 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain AL539_24945 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL539_24945 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain AL539_24945 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain AL539_24945 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain AL539_24945 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain AL539_24945 IPR022861 Glutamine-tRNA ligase, bacterial AL539_24950 IPR002481 Ferric-uptake regulator AL539_24950 IPR036388 AL539_24950 AL539_24950 IPR036390 AL539_24950 AL539_24955 IPR027961 Protein of unknown function DUF4442 AL539_24955 IPR029069 HotDog domain AL539_24960 IPR001226 Flavodoxin, conserved site AL539_24960 IPR008254 Flavodoxin/nitric oxide synthase AL539_24960 IPR010086 Flavodoxin, long chain AL539_24960 IPR029039 Flavoprotein-like AL539_24965 IPR021249 Protein of unknown function DUF2788 AL539_24970 IPR000073 Alpha/beta hydrolase fold-1 AL539_24970 IPR000639 Epoxide hydrolase-like AL539_24970 IPR029058 Alpha/Beta hydrolase fold AL539_24975 IPR005621 Regulation modulator SeqA AL539_24975 IPR010985 Ribbon-helix-helix AL539_24975 IPR013321 Arc-type ribbon-helix-helix AL539_24975 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain AL539_24975 IPR033761 AL539_24975 AL539_24975 IPR036835 AL539_24975 AL539_24980 IPR005843 Alpha-D-phosphohexomutase, C-terminal AL539_24980 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I AL539_24980 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II AL539_24980 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III AL539_24980 IPR005852 Phosphoglucomutase, alpha-D-glucose specific AL539_24980 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III AL539_24980 IPR016066 Alpha-D-phosphohexomutase, conserved site AL539_24980 IPR036900 AL539_24980 AL539_24985 IPR015003 Protein of unknown function DUF1853 AL539_24990 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 AL539_24990 IPR036069 AL539_24990 AL539_24995 IPR002020 Citrate synthase-like AL539_24995 IPR010953 Citrate synthase, type I AL539_24995 IPR016142 Citrate synthase-like, large alpha subdomain AL539_24995 IPR016143 Citrate synthase-like, small alpha subdomain AL539_24995 IPR019810 Citrate synthase active site AL539_24995 IPR024176 Citrate synthase, bacterial-type AL539_24995 IPR036969 AL539_24995 AL539_25000 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit AL539_25000 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit AL539_25000 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site AL539_25000 IPR034804 AL539_25000 AL539_25005 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor AL539_25005 IPR034804 AL539_25005 AL539_25010 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site AL539_25010 IPR003953 FAD binding domain AL539_25010 IPR011281 Succinate dehydrogenase, flavoprotein subunit AL539_25010 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit AL539_25010 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal AL539_25010 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain AL539_25010 IPR036188 AL539_25010 AL539_25010 IPR037099 AL539_25010 AL539_25015 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein AL539_25015 IPR009051 Alpha-helical ferredoxin AL539_25015 IPR012675 Beta-grasp domain AL539_25015 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AL539_25015 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal AL539_25015 IPR036010 AL539_25015 AL539_25020 IPR001017 Dehydrogenase, E1 component AL539_25020 IPR005475 Transketolase-like, pyrimidine-binding domain AL539_25020 IPR011603 2-oxoglutarate dehydrogenase E1 component AL539_25020 IPR029061 Thiamin diphosphate-binding fold AL539_25020 IPR031717 AL539_25020 AL539_25020 IPR032106 AL539_25020 AL539_25025 IPR000089 Biotin/lipoyl attachment AL539_25025 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain AL539_25025 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site AL539_25025 IPR004167 E3 binding AL539_25025 IPR006255 Dihydrolipoamide succinyltransferase AL539_25025 IPR011053 Single hybrid motif AL539_25025 IPR023213 Chloramphenicol acetyltransferase-like domain AL539_25025 IPR036625 AL539_25025 AL539_25030 IPR005809 Succinyl-CoA synthetase, beta subunit AL539_25030 IPR005811 ATP-citrate lyase/succinyl-CoA ligase AL539_25030 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type AL539_25030 IPR013815 ATP-grasp fold, subdomain 1 AL539_25030 IPR016102 Succinyl-CoA synthetase-like AL539_25030 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site AL539_25035 IPR003781 CoA-binding AL539_25035 IPR005810 Succinyl-CoA ligase, alpha subunit AL539_25035 IPR005811 ATP-citrate lyase/succinyl-CoA ligase AL539_25035 IPR016102 Succinyl-CoA synthetase-like AL539_25035 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site AL539_25035 IPR033847 AL539_25035 AL539_25035 IPR036291 AL539_25035 AL539_25040 IPR001626 ABC-3 AL539_25040 IPR037294 AL539_25040 AL539_25045 IPR003439 ABC transporter-like AL539_25045 IPR003593 AAA+ ATPase domain AL539_25045 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_25050 IPR006127 Periplasmic solute binding protein family AL539_25050 IPR006128 Adhesion lipoprotein AL539_25050 IPR006129 Adhesin B AL539_25055 IPR009057 Homeodomain-like AL539_25055 IPR015943 WD40/YVTN repeat-like-containing domain AL539_25055 IPR018060 DNA binding HTH domain, AraC-type AL539_25055 IPR018062 HTH domain AraC-type, conserved site AL539_25055 IPR020449 Transcription regulator HTH, AraC- type AL539_25055 IPR036890 AL539_25055 AL539_25060 IPR007167 Ferrous iron transporter FeoA domain AL539_25060 IPR008988 Transcriptional repressor, C-terminal AL539_25060 IPR038157 AL539_25060 AL539_25065 IPR003373 Ferrous iron transport protein B AL539_25065 IPR005225 Small GTP-binding protein domain AL539_25065 IPR006073 GTP binding domain AL539_25065 IPR011640 Ferrous iron transport protein B, C-terminal AL539_25065 IPR011642 Nucleoside recognition Gate AL539_25065 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_25065 IPR030389 AL539_25065 AL539_25070 IPR015102 Transcriptional regulator HTH-type, FeoC AL539_25070 IPR036390 AL539_25070 AL539_25075 IPR005134 Uncharacterised protein family UPF0114 AL539_25080 IPR001310 Histidine triad (HIT) protein AL539_25080 IPR026026 Histidine triad hydrolase, Hint-type AL539_25080 IPR036265 AL539_25080 AL539_25085 IPR001278 Arginine-tRNA ligase AL539_25085 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site AL539_25085 IPR005148 Arginyl tRNA synthetase N-terminal domain AL539_25085 IPR008909 DALR anticodon binding AL539_25085 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding AL539_25085 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AL539_25085 IPR035684 AL539_25085 AL539_25085 IPR036695 AL539_25085 AL539_25095 IPR010393 Protein of unknown function DUF991 AL539_25095 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AL539_25100 IPR002376 Formyl transferase, N-terminal AL539_25100 IPR002912 ACT domain AL539_25100 IPR004810 Formyltetrahydrofolate deformylase AL539_25100 IPR036477 AL539_25100 AL539_25105 IPR006555 ATP-dependent helicase, C-terminal AL539_25105 IPR006935 Helicase/UvrB domain AL539_25105 IPR014001 Helicase, superfamily 1/2, ATP-binding domain AL539_25105 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_25110 IPR000905 Gcp-like domain AL539_25110 IPR022496 tRNA threonylcarbamoyl adenosine modification protein YeaZ AL539_25120 IPR004658 Outer membrane lipoprotein Slp AL539_25125 IPR000073 Alpha/beta hydrolase fold-1 AL539_25125 IPR029058 Alpha/Beta hydrolase fold AL539_25130 IPR000873 AMP-dependent synthetase/ligase AL539_25130 IPR020845 AMP-binding, conserved site AL539_25130 IPR025110 AMP-binding enzyme C-terminal domain AL539_25135 IPR002121 HRDC domain AL539_25135 IPR002562 3'-5' exonuclease domain AL539_25135 IPR006292 Ribonuclease D AL539_25135 IPR010997 HRDC-like AL539_25135 IPR012337 Ribonuclease H-like domain AL539_25135 IPR036397 AL539_25135 AL539_25140 IPR005527 Septum formation topological specificity factor MinE AL539_25140 IPR036707 AL539_25140 AL539_25145 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain AL539_25145 IPR010223 ATP binding protein MinD, bacterial-type AL539_25145 IPR025501 ATP binding protein MinD AL539_25145 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_25150 IPR005526 Septum formation inhibitor MinC, C-terminal AL539_25150 IPR007874 Septum formation inhibitor MinC, N-terminal AL539_25150 IPR013033 Septum formation inhibitor MinC AL539_25150 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal AL539_25150 IPR036145 AL539_25150 AL539_25150 IPR038061 AL539_25150 AL539_25155 IPR027354 YcgL domain AL539_25155 IPR038068 AL539_25155 AL539_25160 IPR011970 Lytic murein transglycosylase AL539_25160 IPR023346 Lysozyme-like domain AL539_25160 IPR031304 AL539_25160 AL539_25165 IPR000847 Transcription regulator HTH, LysR AL539_25165 IPR005119 LysR, substrate-binding AL539_25165 IPR036388 AL539_25165 AL539_25165 IPR036390 AL539_25165 AL539_25170 IPR002668 Concentrative nucleoside transporter N-terminal domain AL539_25170 IPR011642 Nucleoside recognition Gate AL539_25170 IPR011657 Concentrative nucleoside transporter C-terminal domain AL539_25170 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial AL539_25175 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase AL539_25175 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AL539_25175 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AL539_25175 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site AL539_25175 IPR036291 AL539_25175 AL539_25185 IPR014030 Beta-ketoacyl synthase, N-terminal AL539_25185 IPR014031 Beta-ketoacyl synthase, C-terminal AL539_25185 IPR016039 Thiolase-like AL539_25185 IPR018201 Beta-ketoacyl synthase, active site AL539_25185 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AL539_25190 IPR002347 Glucose/ribitol dehydrogenase AL539_25190 IPR011285 3-oxoacyl-(acyl-carrier-protein) reductase, putative AL539_25190 IPR036291 AL539_25190 AL539_25195 IPR016776 3-hydroxylacyl-(acyl carrier protein) dehydratase, predicted AL539_25195 IPR029069 HotDog domain AL539_25200 IPR014030 Beta-ketoacyl synthase, N-terminal AL539_25200 IPR014031 Beta-ketoacyl synthase, C-terminal AL539_25200 IPR016039 Thiolase-like AL539_25200 IPR018201 Beta-ketoacyl synthase, active site AL539_25200 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AL539_25205 IPR021675 Protein of unknown function DUF3261 AL539_25210 IPR004869 Membrane transport protein, MMPL domain AL539_25215 IPR004564 Outer membrane lipoprotein carrier protein LolA-like AL539_25215 IPR029046 Lipoprotein localisation LolA/LolB/LppX AL539_25220 IPR029069 HotDog domain AL539_25225 IPR001106 Aromatic amino acid lyase AL539_25225 IPR008948 L-Aspartase-like AL539_25225 IPR022313 Phenylalanine/histidine ammonia-lyases, active site AL539_25225 IPR024083 Fumarase/histidase, N-terminal AL539_25230 IPR001173 Glycosyltransferase 2-like AL539_25230 IPR004960 Bacterial lipid A biosynthesis acyltransferase AL539_25230 IPR029044 Nucleotide-diphospho-sugar transferases AL539_25235 IPR016962 Dehydrase, ECs4332, predicted AL539_25235 IPR029069 HotDog domain AL539_25240 IPR000873 AMP-dependent synthetase/ligase AL539_25240 IPR025110 AMP-binding enzyme C-terminal domain AL539_25245 IPR006008 Intracellular septation protein A AL539_25250 IPR003231 Acyl carrier protein (ACP) AL539_25250 IPR009081 Acyl carrier protein-like AL539_25250 IPR036736 AL539_25250 AL539_25255 IPR009081 Acyl carrier protein-like AL539_25255 IPR036736 AL539_25255 AL539_25260 IPR002123 Phospholipid/glycerol acyltransferase AL539_25265 IPR014030 Beta-ketoacyl synthase, N-terminal AL539_25265 IPR016039 Thiolase-like AL539_25280 IPR002938 Monooxygenase, FAD-binding AL539_25280 IPR036188 AL539_25280 AL539_25285 IPR008258 Lytic transglycosylase-like SLT domain AL539_25285 IPR023346 Lysozyme-like domain AL539_25290 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site AL539_25290 IPR001650 Helicase, C-terminal AL539_25290 IPR011545 DEAD/DEAH box helicase domain AL539_25290 IPR014001 Helicase, superfamily 1/2, ATP-binding domain AL539_25290 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_25295 IPR003148 Regulator of K+ conductance, N-terminal AL539_25295 IPR006037 Regulator of K+ conductance, C-terminal AL539_25295 IPR036291 AL539_25295 AL539_25295 IPR036721 AL539_25295 AL539_25300 IPR003445 Cation transporter AL539_25300 IPR004772 Potassium uptake protein TrkH family AL539_25305 IPR008757 Peptidase M6-like, domain AL539_25305 IPR012045 Peptidase M6, unassigned InhA-related AL539_25305 IPR013783 Immunoglobulin-like fold AL539_25305 IPR018247 EF-Hand 1, calcium-binding site AL539_25305 IPR020008 GlyGly-CTERM domain AL539_25305 IPR035986 AL539_25305 AL539_25315 IPR003846 Uncharacterised protein family UPF0061 AL539_25320 IPR004682 TRAP dicarboxylate transporter AL539_25320 IPR018389 Bacterial extracellular solute-binding protein, family 7 AL539_25320 IPR038404 AL539_25320 AL539_25325 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component AL539_25330 IPR004681 TRAP transporter permease protein AL539_25330 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit AL539_25340 IPR001789 Signal transduction response regulator, receiver domain AL539_25340 IPR002078 RNA polymerase sigma factor 54 interaction domain AL539_25340 IPR002197 DNA binding HTH domain, Fis-type AL539_25340 IPR003593 AAA+ ATPase domain AL539_25340 IPR009057 Homeodomain-like AL539_25340 IPR011006 CheY-like superfamily AL539_25340 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AL539_25340 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AL539_25340 IPR025944 Sigma-54 interaction domain, conserved site AL539_25340 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_25345 IPR003594 Histidine kinase-like ATPase, C-terminal domain AL539_25345 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain AL539_25345 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AL539_25345 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) AL539_25345 IPR029151 Periplasmic sensor domain-like AL539_25345 IPR036097 AL539_25345 AL539_25345 IPR036890 AL539_25345 AL539_25355 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain AL539_25355 IPR005215 Trigger factor AL539_25355 IPR008880 Trigger factor, C-terminal domain AL539_25355 IPR008881 Trigger factor, ribosome-binding, bacterial AL539_25355 IPR027304 Trigger factor/SurA domain AL539_25355 IPR036611 AL539_25355 AL539_25355 IPR037041 AL539_25355 AL539_25360 IPR001907 ATP-dependent Clp protease proteolytic subunit AL539_25360 IPR018215 ClpP, active site AL539_25360 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA AL539_25360 IPR029045 ClpP/crotonase-like domain AL539_25360 IPR033135 AL539_25360 AL539_25365 IPR003593 AAA+ ATPase domain AL539_25365 IPR003959 ATPase, AAA-type, core AL539_25365 IPR004487 Clp protease, ATP-binding subunit ClpX AL539_25365 IPR010603 Zinc finger, ClpX C4-type AL539_25365 IPR019489 Clp ATPase, C-terminal AL539_25365 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_25365 IPR038366 AL539_25365 AL539_25370 IPR003111 Peptidase S16, lon N-terminal AL539_25370 IPR003593 AAA+ ATPase domain AL539_25370 IPR003959 ATPase, AAA-type, core AL539_25370 IPR004815 Lon protease, bacterial/eukaryotic-type AL539_25370 IPR008269 Peptidase S16, Lon C-terminal AL539_25370 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AL539_25370 IPR015947 PUA-like domain AL539_25370 IPR020568 Ribosomal protein S5 domain 2-type fold AL539_25370 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_25370 IPR027543 Lon protease, bacterial AL539_25375 IPR000119 Histone-like bacterial DNA-binding protein AL539_25375 IPR010992 Integration host factor (IHF)-like DNA-binding domain AL539_25375 IPR020816 Histone-like DNA-binding protein, conserved site AL539_25380 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site AL539_25380 IPR027304 Trigger factor/SurA domain AL539_25385 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 AL539_25385 IPR004509 Competence protein ComEA, helix-hairpin-helix domain AL539_25385 IPR010994 RuvA domain 2-like AL539_25390 IPR022764 Peptidase S54, rhomboid domain AL539_25390 IPR023826 Rhomboid-like serine protease, proteobacteria AL539_25390 IPR035952 AL539_25390 AL539_25395 IPR005636 DTW AL539_25400 IPR003607 HD/PDEase domain AL539_25400 IPR006261 Deoxyguanosinetriphosphate triphosphohydrolase AL539_25400 IPR006674 HD domain AL539_25400 IPR023023 Deoxyguanosinetriphosphate triphosphohydrolase, type 2 AL539_25400 IPR026875 Phosphohydrolase-associated domain AL539_25405 IPR003607 HD/PDEase domain AL539_25405 IPR006674 HD domain AL539_25405 IPR022971 5'-deoxynucleotidase YfbR AL539_25410 IPR004839 Aminotransferase, class I/classII AL539_25410 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 AL539_25410 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 AL539_25410 IPR015424 Pyridoxal phosphate-dependent transferase AL539_25415 IPR004561 Isochorismate synthase AL539_25415 IPR005801 ADC synthase AL539_25415 IPR015890 Chorismate binding, C-terminal AL539_25415 IPR034681 AL539_25415 AL539_25420 IPR004433 Menaquinone biosynthesis protein MenD AL539_25420 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding AL539_25420 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain AL539_25420 IPR029061 Thiamin diphosphate-binding fold AL539_25420 IPR032264 AL539_25420 AL539_25425 IPR000073 Alpha/beta hydrolase fold-1 AL539_25425 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase AL539_25425 IPR029058 Alpha/Beta hydrolase fold AL539_25430 IPR001753 Crotonase superfamily AL539_25430 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase AL539_25430 IPR014748 Crontonase, C-terminal AL539_25430 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site AL539_25430 IPR029045 ClpP/crotonase-like domain AL539_25435 IPR010196 O-succinylbenzoic acid (OSB) synthetase AL539_25435 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal AL539_25435 IPR029017 Enolase N-terminal domain-like AL539_25435 IPR029065 Enolase C-terminal domain-like AL539_25435 IPR036849 AL539_25435 AL539_25440 IPR000873 AMP-dependent synthetase/ligase AL539_25440 IPR010192 2-succinylbenzoate--CoA ligase AL539_25440 IPR020845 AMP-binding, conserved site AL539_25450 IPR018383 Uncharacterised protein family UPF0324, prokaryote AL539_25455 IPR002123 Phospholipid/glycerol acyltransferase AL539_25455 IPR011701 Major facilitator superfamily AL539_25455 IPR036259 AL539_25455 AL539_25460 IPR009057 Homeodomain-like AL539_25460 IPR025996 WHG domain AL539_25460 IPR036271 AL539_25460 AL539_25465 IPR007379 Tim44-like domain AL539_25465 IPR032710 AL539_25465 AL539_25505 IPR006143 RND efflux pump, membrane fusion protein AL539_25505 IPR032317 AL539_25505 AL539_25510 IPR001036 Acriflavin resistance protein AL539_25510 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AL539_25515 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel AL539_25515 IPR027385 Outer membrane protein beta-barrel AL539_25520 IPR023163 SMc04008-like domain AL539_25520 IPR036810 AL539_25520 AL539_25525 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AL539_25525 IPR036052 AL539_25525 AL539_25530 IPR000485 AsnC-type HTH domain AL539_25530 IPR011008 Dimeric alpha-beta barrel AL539_25530 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AL539_25530 IPR019887 Transcription regulator AsnC-type, C-terminal AL539_25530 IPR019888 Transcription regulator AsnC-type AL539_25530 IPR036388 AL539_25530 AL539_25530 IPR036390 AL539_25530 AL539_25540 IPR003703 Acyl-CoA thioesterase AL539_25540 IPR029069 HotDog domain AL539_25545 IPR039366 AL539_25545 AL539_25550 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding AL539_25550 IPR036217 AL539_25550 AL539_25550 IPR036388 AL539_25550 AL539_25560 IPR000160 GGDEF domain AL539_25560 IPR001638 Extracellular solute-binding protein, family 3 AL539_25560 IPR029787 Nucleotide cyclase AL539_25570 IPR001537 tRNA/rRNA methyltransferase, SpoU type AL539_25570 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AL539_25570 IPR029028 Alpha/beta knot methyltransferases AL539_25570 IPR029064 50S ribosomal protein L30e-like AL539_25575 IPR000644 CBS domain AL539_25580 IPR001757 Cation-transporting P-type ATPase AL539_25580 IPR006121 Heavy metal-associated domain, HMA AL539_25580 IPR008250 P-type ATPase, A domain AL539_25580 IPR017969 Heavy-metal-associated, conserved site AL539_25580 IPR018303 P-type ATPase, phosphorylation site AL539_25580 IPR023214 HAD-like domain AL539_25580 IPR023298 P-type ATPase, transmembrane domain AL539_25580 IPR023299 P-type ATPase, cytoplasmic domain N AL539_25580 IPR027256 Cation-transporting P-type ATPase, subfamily IB AL539_25580 IPR036163 AL539_25580 AL539_25580 IPR036412 AL539_25580 AL539_25585 IPR000845 Nucleoside phosphorylase domain AL539_25585 IPR010058 Uridine phosphorylase AL539_25585 IPR018016 Nucleoside phosphorylase, conserved site AL539_25585 IPR035994 AL539_25585 AL539_25590 IPR011335 Restriction endonuclease type II-like AL539_25590 IPR011856 tRNA endonuclease-like domain AL539_25590 IPR015093 Protein of unknown function DUF1887 AL539_25595 IPR003660 HAMP linker domain AL539_25595 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AL539_25595 IPR004090 Chemotaxis methyl-accepting receptor AL539_25600 IPR001310 Histidine triad (HIT) protein AL539_25600 IPR019808 Histidine triad, conserved site AL539_25600 IPR036265 AL539_25600 AL539_25605 IPR011990 Tetratricopeptide-like helical domain AL539_25610 IPR010824 Protein of unknown function DUF1425 AL539_25610 IPR038483 AL539_25610 AL539_25615 IPR014094 Penicillin-binding protein activator LpoB AL539_25620 IPR002575 Aminoglycoside phosphotransferase AL539_25620 IPR011009 Protein kinase-like domain AL539_25620 IPR014093 Thiamine kinase AL539_25625 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA AL539_25625 IPR022987 Uncharacterised protein family UPF0227 AL539_25625 IPR029058 Alpha/Beta hydrolase fold AL539_25630 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain AL539_25630 IPR036188 AL539_25630 AL539_25635 IPR000182 GNAT domain AL539_25635 IPR016181 Acyl-CoA N-acyltransferase AL539_25640 IPR021241 Protein of unknown function DUF2803 AL539_25645 IPR001650 Helicase, C-terminal AL539_25645 IPR003711 CarD-like/TRCF domain AL539_25645 IPR004576 Transcription-repair coupling factor AL539_25645 IPR005118 Transcription-repair-coupling factor, C-terminal domain AL539_25645 IPR011545 DEAD/DEAH box helicase domain AL539_25645 IPR014001 Helicase, superfamily 1/2, ATP-binding domain AL539_25645 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_25645 IPR036101 AL539_25645 AL539_25645 IPR037235 AL539_25645 AL539_25655 IPR003838 Permease FtsX-like AL539_25655 IPR011925 Lipoprotein releasing system, transmembrane protein, LolC/E family AL539_25655 IPR025857 MacB-like periplasmic core domain AL539_25660 IPR003439 ABC transporter-like AL539_25660 IPR003593 AAA+ ATPase domain AL539_25660 IPR011924 Lipoprotein releasing system, ATP-binding protein AL539_25660 IPR017871 ABC transporter, conserved site AL539_25660 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_25665 IPR003838 Permease FtsX-like AL539_25665 IPR011925 Lipoprotein releasing system, transmembrane protein, LolC/E family AL539_25665 IPR011926 Lipoprotein releasing system, transmembrane protein LolE AL539_25665 IPR025857 MacB-like periplasmic core domain AL539_25670 IPR018639 Domain of unknown function DUF2062 AL539_25675 IPR001279 Beta-lactamase-like AL539_25675 IPR004477 ComEC/Rec2-related protein AL539_25675 IPR004797 Competence protein ComEC/Rec2 AL539_25675 IPR036866 AL539_25675 AL539_25680 IPR003439 ABC transporter-like AL539_25680 IPR003593 AAA+ ATPase domain AL539_25680 IPR011527 ABC transporter type 1, transmembrane domain AL539_25680 IPR011917 ABC transporter, lipid A export, MsbA AL539_25680 IPR017871 ABC transporter, conserved site AL539_25680 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_25680 IPR036640 AL539_25680 AL539_25685 IPR003758 Tetraacyldisaccharide 4'-kinase AL539_25685 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_25690 IPR005651 Uncharacterised protein family UPF0434/Trm112 AL539_25690 IPR038053 AL539_25690 AL539_25695 IPR003329 Acylneuraminate cytidylyltransferase AL539_25695 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase AL539_25695 IPR029044 Nucleotide-diphospho-sugar transferases AL539_25700 IPR007390 Sporulation stage V, protein R AL539_25705 IPR006698 Thermus phage phiYS40, Orf56 AL539_25710 IPR010650 PrkA C-terminal domain AL539_25710 IPR013153 PrkA AAA domain AL539_25710 IPR016230 Serine-protein kinase, PrkA AL539_25710 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_25720 IPR005587 Uncharacterised protein family UPF0304, YfbU AL539_25720 IPR023145 YfbU, helix-hairpin domain AL539_25720 IPR023146 YfbU, alpha-helical bundle domain AL539_25725 IPR002751 Cobalamin (vitamin B12) biosynthesis CbiM family AL539_25730 IPR001989 Radical-activating enzyme, conserved site AL539_25730 IPR007197 Radical SAM AL539_25730 IPR012838 Pyruvate formate-lyase activating enzyme AL539_25730 IPR012839 Glycyl radical enzyme activase AL539_25730 IPR013785 Aldolase-type TIM barrel AL539_25735 IPR018707 Protein of unknown function DUF2219 AL539_25735 IPR037107 AL539_25735 AL539_25740 IPR001150 Glycine radical domain AL539_25740 IPR004184 Pyruvate formate lyase domain AL539_25740 IPR005949 Formate acetyltransferase AL539_25740 IPR019777 Formate C-acetyltransferase glycine radical, conserved site AL539_25745 IPR021794 Protein of unknown function DUF3360 AL539_25760 IPR003439 ABC transporter-like AL539_25760 IPR003593 AAA+ ATPase domain AL539_25760 IPR017871 ABC transporter, conserved site AL539_25760 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_25760 IPR030679 AL539_25760 AL539_25765 IPR001320 Ionotropic glutamate receptor AL539_25765 IPR001638 Extracellular solute-binding protein, family 3 AL539_25765 IPR005768 Lysine-arginine-ornithine-binding periplasmic protein AL539_25765 IPR018313 Extracellular solute-binding protein, family 3, conserved site AL539_25770 IPR000515 MetI-like domain AL539_25770 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family AL539_25770 IPR035906 AL539_25770 AL539_25775 IPR000515 MetI-like domain AL539_25775 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family AL539_25775 IPR035906 AL539_25775 AL539_25780 IPR031161 AL539_25780 AL539_25780 IPR035423 AL539_25780 AL539_25785 IPR004808 AP endonuclease 1 AL539_25785 IPR005135 Endonuclease/exonuclease/phosphatase AL539_25785 IPR020847 AP endonuclease 1, binding site AL539_25785 IPR020848 AP endonuclease 1, conserved site AL539_25785 IPR036691 AL539_25785 AL539_25790 IPR019630 Protein of unknown function DUF2496, YbaM-related AL539_25795 IPR010890 Primosomal replication PriB/PriC AL539_25795 IPR038338 AL539_25795 AL539_25800 IPR002781 Transmembrane protein TauE like AL539_25805 IPR006555 ATP-dependent helicase, C-terminal AL539_25805 IPR006935 Helicase/UvrB domain AL539_25805 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_25805 IPR039000 AL539_25805 AL539_25810 IPR023614 Porin domain AL539_25815 IPR018635 Uncharacterised protein family UPF0319 AL539_25820 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F AL539_25820 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F AL539_25820 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site AL539_25820 IPR020103 Pseudouridine synthase, catalytic domain AL539_25825 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric AL539_25830 IPR002059 Cold-shock protein, DNA-binding AL539_25830 IPR011129 Cold shock protein AL539_25830 IPR012156 Cold shock, CspA AL539_25830 IPR012340 Nucleic acid-binding, OB-fold AL539_25830 IPR012751 CspD, cold shock AL539_25830 IPR019844 Cold-shock conserved site AL539_25835 IPR003769 Adaptor protein ClpS, core AL539_25835 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like AL539_25835 IPR022935 ATP-dependent Clp protease adaptor protein ClpS AL539_25840 IPR001270 ClpA/B family AL539_25840 IPR003593 AAA+ ATPase domain AL539_25840 IPR003959 ATPase, AAA-type, core AL539_25840 IPR004176 Clp, N-terminal AL539_25840 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA AL539_25840 IPR018368 ClpA/B, conserved site 1 AL539_25840 IPR019489 Clp ATPase, C-terminal AL539_25840 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_25840 IPR028299 ClpA/B, conserved site 2 AL539_25840 IPR036628 AL539_25840 AL539_25845 IPR004368 Translation initiation factor IF-1 AL539_25845 IPR006196 RNA-binding domain, S1, IF1 type AL539_25845 IPR012340 Nucleic acid-binding, OB-fold AL539_25845 IPR022967 RNA-binding domain, S1 AL539_25850 IPR007471 Arginine-tRNA-protein transferase, N-terminal AL539_25850 IPR007472 Arginine-tRNA-protein transferase, C-terminal AL539_25850 IPR016181 Acyl-CoA N-acyltransferase AL539_25850 IPR017138 Arginine-tRNA-protein transferase, predicted, prokaryotic AL539_25855 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase AL539_25855 IPR016181 Acyl-CoA N-acyltransferase AL539_25860 IPR008816 Glycine zipper 2TM domain AL539_25865 IPR001986 Enolpyruvate transferase domain AL539_25865 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase AL539_25865 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta AL539_25865 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site AL539_25865 IPR036968 AL539_25865 AL539_25870 IPR019633 Protein of unknown function DUF2498 AL539_25870 IPR038191 AL539_25870 AL539_25875 IPR003601 DNA topoisomerase, type IA, domain 2 AL539_25875 IPR003602 DNA topoisomerase, type IA, DNA-binding domain AL539_25875 IPR005733 DNA topoisomerase I, bacterial-type AL539_25875 IPR006171 Toprim domain AL539_25875 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type AL539_25875 IPR013497 DNA topoisomerase, type IA, central AL539_25875 IPR013498 DNA topoisomerase, type IA, zn finger AL539_25875 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 AL539_25875 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 AL539_25875 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 AL539_25875 IPR023405 DNA topoisomerase, type IA, core domain AL539_25875 IPR023406 DNA topoisomerase, type IA, active site AL539_25875 IPR028612 DNA topoisomerase I, type IA AL539_25880 IPR005835 Nucleotidyl transferase AL539_25880 IPR005836 ADP-glucose pyrophosphorylase, conserved site AL539_25880 IPR011004 Trimeric LpxA-like AL539_25880 IPR011831 Glucose-1-phosphate adenylyltransferase AL539_25880 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial AL539_25880 IPR029044 Nucleotide-diphospho-sugar transferases AL539_25885 IPR001296 Glycosyl transferase, family 1 AL539_25885 IPR011835 Glycogen/starch synthase, ADP-glucose type AL539_25885 IPR013534 Starch synthase, catalytic domain AL539_25890 IPR000073 Alpha/beta hydrolase fold-1 AL539_25890 IPR000639 Epoxide hydrolase-like AL539_25890 IPR029058 Alpha/Beta hydrolase fold AL539_25895 IPR001876 Zinc finger, RanBP2-type AL539_25895 IPR018551 Domain of unknown function DUF2007 AL539_25900 IPR032816 AL539_25900 AL539_25905 IPR007076 TfoX, N-terminal AL539_25905 IPR007077 TfoX, C-terminal AL539_25905 IPR026256 Transcriptional regulator, TfoX/Sxy-type AL539_25910 IPR000843 Transcription regulator HTH, LacI AL539_25910 IPR010982 Lambda repressor-like, DNA-binding domain AL539_25910 IPR023588 Transcription regulator HTH, PurR AL539_25910 IPR028082 Periplasmic binding protein-like I AL539_25915 IPR020945 DMSO/Nitrate reductase chaperone AL539_25915 IPR023069 Chaperone TorD AL539_25915 IPR036386 AL539_25915 AL539_25915 IPR036411 AL539_25915 AL539_25920 IPR001789 Signal transduction response regulator, receiver domain AL539_25920 IPR001867 Signal transduction response regulator, C-terminal AL539_25920 IPR011006 CheY-like superfamily AL539_25920 IPR016032 Signal transduction response regulator, C-terminal effector AL539_25920 IPR036388 AL539_25920 AL539_25925 IPR003848 Domain of unknown function DUF218 AL539_25930 IPR013216 Methyltransferase type 11 AL539_25930 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like AL539_25930 IPR033664 AL539_25930 AL539_25935 IPR005582 Chromosome partition protein MukF AL539_25935 IPR033439 AL539_25935 AL539_25935 IPR033440 AL539_25935 AL539_25935 IPR033441 AL539_25935 AL539_25935 IPR036141 AL539_25935 AL539_25935 IPR036388 AL539_25935 AL539_25935 IPR036390 AL539_25935 AL539_25935 IPR038198 AL539_25935 AL539_25940 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE AL539_25945 IPR007406 MukB, N-terminal domain AL539_25945 IPR012090 Chromosome partition protein MukB AL539_25945 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_25945 IPR032520 AL539_25945 AL539_25955 IPR011758 Alpha-L-glutamate ligase-related protein AL539_25955 IPR039523 AL539_25955 AL539_25960 IPR025838 Inactive transglutaminase fused to 7 transmembrane helices AL539_25960 IPR025840 7 transmembrane helices usually fused to an inactive transglutaminase AL539_25965 IPR021109 Aspartic peptidase domain AL539_25975 IPR010017 tRNA (mo5U34)-methyltransferase AL539_25975 IPR027555 tRNA (mo5U34)-methyltransferase-like AL539_25975 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like AL539_25980 IPR005271 tRNA (cmo5U34)-methyltransferase AL539_25980 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like AL539_25985 IPR002763 Protein of unknown function DUF72 AL539_25985 IPR036520 AL539_25985 AL539_25990 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb AL539_25990 IPR004115 GAD-like domain AL539_25990 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) AL539_25990 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type AL539_25990 IPR004524 Aspartate-tRNA ligase, class IIb, bacterial/mitochondrial-type AL539_25990 IPR012340 Nucleic acid-binding, OB-fold AL539_25990 IPR029351 GAD domain AL539_25995 IPR002876 Transcriptional regulator TACO1-like AL539_25995 IPR017856 Integrase, N-terminal zinc-binding domain-like AL539_25995 IPR026564 Transcriptional regulator TACO1-like, domain 3 AL539_25995 IPR029072 YebC-like AL539_26000 IPR002176 Crossover junction endodeoxyribonuclease RuvC AL539_26000 IPR012337 Ribonuclease H-like domain AL539_26000 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site AL539_26000 IPR036397 AL539_26000 AL539_26005 IPR000085 Bacterial DNA recombination protein RuvA AL539_26005 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 AL539_26005 IPR010994 RuvA domain 2-like AL539_26005 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal AL539_26005 IPR012340 Nucleic acid-binding, OB-fold AL539_26005 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial AL539_26005 IPR036267 AL539_26005 AL539_26010 IPR003593 AAA+ ATPase domain AL539_26010 IPR004605 DNA helicase, Holliday junction RuvB type AL539_26010 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal AL539_26010 IPR008824 DNA helicase, Holliday junction RuvB type, N-terminal AL539_26010 IPR027417 P-loop containing nucleoside triphosphate hydrolase AL539_26010 IPR036388 AL539_26010 AL539_26010 IPR036390 AL539_26010 AL539_26015 IPR002585 Cytochrome d ubiquinol oxidase, subunit I AL539_26020 IPR003317 Cytochrome d ubiquinol oxidase, subunit II AL539_26025 IPR011724 Cyd operon protein YbgT AL539_26025 IPR012994 Membrane bound YbgT-like AL539_26030 IPR011846 Cyd operon protein YbgE AL539_26035 IPR006683 Thioesterase superfamily AL539_26035 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family AL539_26035 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase AL539_26035 IPR029069 HotDog domain AL539_26040 IPR002898 MotA/TolQ/ExbB proton channel AL539_26040 IPR014163 Tol-Pal system, TolQ AL539_26045 IPR003400 Biopolymer transport protein ExbD/TolR AL539_26045 IPR014168 Biopolymer transport, TolR AL539_26050 IPR014161 Tol-Pal system, TolA AL539_26055 IPR007195 TolB, N-terminal AL539_26055 IPR011042 Six-bladed beta-propeller, TolB-like AL539_26055 IPR011659 WD40-like Beta Propeller AL539_26055 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB AL539_26055 IPR036752 AL539_26055 AL539_26060 IPR006664 Outer membrane protein, bacterial AL539_26060 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal AL539_26060 IPR006690 Outer membrane protein, OmpA-like, conserved site AL539_26060 IPR014169 Peptidoglycan-associated lipoprotein AL539_26060 IPR036737 AL539_26060 AL539_26060 IPR039001 AL539_26060 AL539_26065 IPR011990 Tetratricopeptide-like helical domain AL539_26065 IPR014162 Tol-Pal system, YbgF AL539_26065 IPR019734 Tetratricopeptide repeat AL539_26065 IPR032519 AL539_26065 AL539_26065 IPR034706 AL539_26065 AL539_26070 IPR003473 Quinolinate synthetase A AL539_26070 IPR023513 Quinolinate synthase A, type 1 AL539_26070 IPR036094 AL539_26070 AL539_26075 IPR013099 Two pore domain potassium channel domain AL539_26075 IPR036291 AL539_26075 AL539_26080 IPR007140 Protein of unknown function DUF350 AL539_26085 IPR009576 Biofilm formation YgiB AL539_26090 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain AL539_26090 IPR016185 Pre-ATP-grasp domain AL539_26095 IPR011978 Uncharacterised protein family UPF0149 AL539_26095 IPR036255 AL539_26095