AL539_00010	SSF103088	OmpA-like
AL539_00015	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_00025	SSF81606	PP2C-like
AL539_00050	SSF144059	ImpE-like
AL539_00055	SSF160719	gpW/gp25-like
AL539_00070	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_00070	SSF81923	Double Clp-N motif
AL539_00075	SSF141452	Hcp1-like
AL539_00080	SSF69255	gp5 N-terminal domain-like
AL539_00080	SSF69279	Phage tail proteins
AL539_00080	SSF69349	Phage fibre proteins
AL539_00095	SSF56300	Metallo-dependent phosphatases
AL539_00100	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_00105	SSF54403	Cystatin/monellin
AL539_00110	SSF50814	Lipocalins
AL539_00115	SSF53187	Zn-dependent exopeptidases
AL539_00125	SSF46626	Cytochrome c
AL539_00130	SSF53383	PLP-dependent transferases
AL539_00135	SSF55811	Nudix
AL539_00140	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_00145	SSF53300	vWA-like
AL539_00160	SSF46785	"Winged helix" DNA-binding domain
AL539_00160	SSF53850	Periplasmic binding protein-like II
AL539_00165	SSF55103	FAD-linked oxidases, C-terminal domain
AL539_00165	SSF56176	FAD-binding/transporter-associated domain-like
AL539_00180	SSF50621	Alanine racemase C-terminal domain-like
AL539_00180	SSF51419	PLP-binding barrel
AL539_00185	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
AL539_00200	SSF51011	Glycosyl hydrolase domain
AL539_00200	SSF51445	(Trans)glycosidases
AL539_00210	SSF53474	alpha/beta-Hydrolases
AL539_00235	SSF51679	Bacterial luciferase-like
AL539_00240	SSF55073	Nucleotide cyclase
AL539_00245	SSF53850	Periplasmic binding protein-like II
AL539_00250	SSF55073	Nucleotide cyclase
AL539_00250	SSF55785	PYP-like sensor domain (PAS domain)
AL539_00260	SSF54534	FKBP-like
AL539_00265	SSF51905	FAD/NAD(P)-binding domain
AL539_00265	SSF55124	Nitrite/Sulfite reductase N-terminal domain-like
AL539_00265	SSF56014	Nitrite and sulphite reductase 4Fe-4S domain-like
AL539_00270	SSF50022	ISP domain
AL539_00280	SSF53790	Tetrapyrrole methylase
AL539_00310	SSF56935	Porins
AL539_00320	SSF55729	Acyl-CoA N-acyltransferases (Nat)
AL539_00330	SSF103473	MFS general substrate transporter
AL539_00335	SSF52833	Thioredoxin-like
AL539_00340	SSF53901	Thiolase-like
AL539_00355	SSF55035	NAD-binding domain of HMG-CoA reductase
AL539_00355	SSF56542	Substrate-binding domain of HMG-CoA reductase
AL539_00360	SSF51182	RmlC-like cupins
AL539_00365	SSF103473	MFS general substrate transporter
AL539_00370	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
AL539_00375	SSF46894	C-terminal effector domain of the bipartite response regulators
AL539_00375	SSF52172	CheY-like
AL539_00380	SSF103473	MFS general substrate transporter
AL539_00385	SSF53927	Cytidine deaminase-like
AL539_00390	SSF46785	"Winged helix" DNA-binding domain
AL539_00390	SSF53850	Periplasmic binding protein-like II
AL539_00400	SSF50692	ADC-like
AL539_00400	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
AL539_00415	SSF54506	Diaminopimelate epimerase-like
AL539_00420	SSF53681	Aspartate/glutamate racemase
AL539_00425	SSF51905	FAD/NAD(P)-binding domain
AL539_00425	SSF52821	Rhodanese/Cell cycle control phosphatase
AL539_00425	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
AL539_00430	SSF46785	"Winged helix" DNA-binding domain
AL539_00445	SSF56219	DNase I-like
AL539_00455	SSF51998	PFL-like glycyl radical enzymes
AL539_00460	SSF102114	Radical SAM enzymes
AL539_00470	SSF46689	Homeodomain-like
AL539_00470	SSF51215	Regulatory protein AraC
AL539_00475	SSF53383	PLP-dependent transferases
AL539_00480	SSF50630	Acid proteases
AL539_00490	SSF101756	Hypothetical protein YgiW
AL539_00495	SSF52317	Class I glutamine amidotransferase-like
AL539_00495	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_00500	SSF53850	Periplasmic binding protein-like II
AL539_00505	SSF161098	MetI-like
AL539_00510	SSF50331	MOP-like
AL539_00510	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_00515	SSF158675	Sama2622-like
AL539_00520	SSF52172	CheY-like
AL539_00520	SSF55073	Nucleotide cyclase
AL539_00525	SSF55073	Nucleotide cyclase
AL539_00535	SSF46785	"Winged helix" DNA-binding domain
AL539_00540	SSF46689	Homeodomain-like
AL539_00555	SSF51735	NAD(P)-binding Rossmann-fold domains
AL539_00555	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
AL539_00560	SSF52467	DHS-like NAD/FAD-binding domain
AL539_00565	SSF47384	Homodimeric domain of signal transducing histidine kinase
AL539_00565	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
AL539_00570	SSF46894	C-terminal effector domain of the bipartite response regulators
AL539_00570	SSF52172	CheY-like
AL539_00580	SSF56925	OMPA-like
AL539_00590	SSF52402	Adenine nucleotide alpha hydrolases-like
AL539_00600	SSF46785	"Winged helix" DNA-binding domain
AL539_00600	SSF53850	Periplasmic binding protein-like II
AL539_00620	SSF55159	eIF1-like
AL539_00630	SSF52440	PreATP-grasp domain
AL539_00630	SSF56059	Glutathione synthetase ATP-binding domain-like
AL539_00635	SSF110997	Sporulation related repeat
AL539_00640	SSF51735	NAD(P)-binding Rossmann-fold domains
AL539_00640	SSF52210	Succinyl-CoA synthetase domains
AL539_00640	SSF55729	Acyl-CoA N-acyltransferases (Nat)
AL539_00640	SSF56059	Glutathione synthetase ATP-binding domain-like
AL539_00645	SSF46785	"Winged helix" DNA-binding domain
AL539_00645	SSF53850	Periplasmic binding protein-like II
AL539_00650	SSF56935	Porins
AL539_00660	SSF51735	NAD(P)-binding Rossmann-fold domains
AL539_00665	SSF158472	HAMP domain-like
AL539_00665	SSF55073	Nucleotide cyclase
AL539_00665	SSF55785	PYP-like sensor domain (PAS domain)
AL539_00670	SSF88713	Glycoside hydrolase/deacetylase
AL539_00675	SSF160467	PH0987 N-terminal domain-like
AL539_00675	SSF50891	Cyclophilin-like
AL539_00680	SSF50891	Cyclophilin-like
AL539_00685	SSF51735	NAD(P)-binding Rossmann-fold domains
AL539_00685	SSF51905	FAD/NAD(P)-binding domain
AL539_00695	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_00700	SSF52266	SGNH hydrolase
AL539_00705	SSF51735	NAD(P)-binding Rossmann-fold domains
AL539_00710	SSF141868	EAL domain-like
AL539_00710	SSF55073	Nucleotide cyclase
AL539_00710	SSF55781	GAF domain-like
AL539_00715	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_00720	SSF46565	Chaperone J-domain
AL539_00725	SSF51197	Clavaminate synthase-like
AL539_00735	SSF54913	GlnB-like
AL539_00745	SSF53850	Periplasmic binding protein-like II
AL539_00755	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
AL539_00770	SSF56935	Porins
AL539_00775	SSF53474	alpha/beta-Hydrolases
AL539_00780	SSF50182	Sm-like ribonucleoproteins
AL539_00785	SSF82057	Prokaryotic SH3-related domain
AL539_00800	SSF55816	5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain
AL539_00800	SSF56300	Metallo-dependent phosphatases
AL539_00805	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_00815	SSF46785	"Winged helix" DNA-binding domain
AL539_00815	SSF53850	Periplasmic binding protein-like II
AL539_00820	SSF54631	CBS-domain pair
AL539_00825	SSF101874	YceI-like
AL539_00830	SSF81342	Transmembrane di-heme cytochromes
AL539_00845	SSF141868	EAL domain-like
AL539_00850	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_00865	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
AL539_00875	SSF56784	HAD-like
AL539_00890	SSF53613	Ribokinase-like
AL539_00895	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_00900	SSF51161	Trimeric LpxA-like enzymes
AL539_00900	SSF53448	Nucleotide-diphospho-sugar transferases
AL539_00905	SSF51055	Carbohydrate binding domain
AL539_00905	SSF51445	(Trans)glycosidases
AL539_00905	SSF54556	Chitinase insertion domain
AL539_00915	SSF46689	Homeodomain-like
AL539_00920	SSF56796	Dehydroquinate synthase-like
AL539_00930	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_00935	SSF161098	MetI-like
AL539_00940	SSF53850	Periplasmic binding protein-like II
AL539_00945	SSF161098	MetI-like
AL539_00950	SSF141868	EAL domain-like
AL539_00955	SSF55174	Alpha-L RNA-binding motif
AL539_00960	SSF56219	DNase I-like
AL539_00965	SSF47413	lambda repressor-like DNA-binding domains
AL539_00965	SSF53822	Periplasmic binding protein-like I
AL539_00970	SSF55594	HPr-like
AL539_00970	SSF55804	Phoshotransferase/anion transport protein
AL539_00975	SSF53613	Ribokinase-like
AL539_00980	SSF52794	PTS system IIB component-like
AL539_00985	SSF69318	Integrin alpha N-terminal domain
AL539_00990	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
AL539_00990	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
AL539_00990	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
AL539_00995	SSF111369	HlyD-like secretion proteins
AL539_01000	SSF111369	HlyD-like secretion proteins
AL539_01005	SSF46689	Homeodomain-like
AL539_01010	SSF101790	Aminomethyltransferase beta-barrel domain
AL539_01010	SSF103025	Folate-binding domain
AL539_01015	SSF47413	lambda repressor-like DNA-binding domains
AL539_01015	SSF51182	RmlC-like cupins
AL539_01020	SSF53383	PLP-dependent transferases
AL539_01025	SSF51230	Single hybrid motif
AL539_01030	SSF53383	PLP-dependent transferases
AL539_01035	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
AL539_01045	SSF56281	Metallo-hydrolase/oxidoreductase
AL539_01050	SSF46785	"Winged helix" DNA-binding domain
AL539_01050	SSF53850	Periplasmic binding protein-like II
AL539_01055	SSF103481	Multidrug resistance efflux transporter EmrE
AL539_01060	SSF69118	AhpD-like
AL539_01065	SSF46689	Homeodomain-like
AL539_01080	SSF53383	PLP-dependent transferases
AL539_01090	SSF53098	Ribonuclease H-like
AL539_01095	SSF49464	Carboxypeptidase regulatory domain-like
AL539_01100	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_01100	SSF90123	ABC transporter transmembrane region
AL539_01120	SSF56931	Outer membrane phospholipase A (OMPLA)
AL539_01130	SSF53098	Ribonuclease H-like
AL539_01135	SSF46955	Putative DNA-binding domain
AL539_01140	SSF56420	Peptide deformylase
AL539_01150	SSF81901	HCP-like
AL539_01165	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_01175	SSF158791	MgtE N-terminal domain-like
AL539_01175	SSF161093	MgtE membrane domain-like
AL539_01180	SSF52402	Adenine nucleotide alpha hydrolases-like
AL539_01185	SSF101386	all-alpha NTP pyrophosphatases
AL539_01190	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
AL539_01195	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
AL539_01200	SSF51395	FMN-linked oxidoreductases
AL539_01210	SSF52266	SGNH hydrolase
AL539_01225	SSF48113	Heme-dependent peroxidases
AL539_01230	SSF51395	FMN-linked oxidoreductases
AL539_01235	SSF55826	YbaK/ProRS associated domain
AL539_01240	SSF53720	ALDH-like
AL539_01245	SSF55729	Acyl-CoA N-acyltransferases (Nat)
AL539_01250	SSF55811	Nudix
AL539_01255	SSF103481	Multidrug resistance efflux transporter EmrE
AL539_01260	SSF103481	Multidrug resistance efflux transporter EmrE
AL539_01265	SSF56219	DNase I-like
AL539_01275	SSF161084	MAPEG domain-like
AL539_01280	SSF103481	Multidrug resistance efflux transporter EmrE
AL539_01290	SSF54523	Pili subunits
AL539_01295	SSF50341	CheW-like
AL539_01295	SSF52172	CheY-like
AL539_01305	SSF46894	C-terminal effector domain of the bipartite response regulators
AL539_01305	SSF52172	CheY-like
AL539_01310	SSF46785	"Winged helix" DNA-binding domain
AL539_01310	SSF53850	Periplasmic binding protein-like II
AL539_01315	SSF55073	Nucleotide cyclase
AL539_01320	SSF46894	C-terminal effector domain of the bipartite response regulators
AL539_01320	SSF52172	CheY-like
AL539_01325	SSF141868	EAL domain-like
AL539_01325	SSF52172	CheY-like
AL539_01330	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
AL539_01330	SSF47384	Homodimeric domain of signal transducing histidine kinase
AL539_01330	SSF52172	CheY-like
AL539_01330	SSF53850	Periplasmic binding protein-like II
AL539_01330	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
AL539_01335	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_01340	SSF53383	PLP-dependent transferases
AL539_01345	SSF47384	Homodimeric domain of signal transducing histidine kinase
AL539_01345	SSF52172	CheY-like
AL539_01345	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
AL539_01350	SSF56784	HAD-like
AL539_01355	SSF55729	Acyl-CoA N-acyltransferases (Nat)
AL539_01375	SSF103473	MFS general substrate transporter
AL539_01385	SSF56925	OMPA-like
AL539_01390	SSF101756	Hypothetical protein YgiW
AL539_01395	SSF111331	NAD kinase/diacylglycerol kinase-like
AL539_01400	SSF46785	"Winged helix" DNA-binding domain
AL539_01400	SSF53850	Periplasmic binding protein-like II
AL539_01405	SSF53927	Cytidine deaminase-like
AL539_01415	SSF53300	vWA-like
AL539_01420	SSF53300	vWA-like
AL539_01435	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_01440	SSF102114	Radical SAM enzymes
AL539_01445	SSF53649	Alkaline phosphatase-like
AL539_01450	SSF46785	"Winged helix" DNA-binding domain
AL539_01450	SSF53850	Periplasmic binding protein-like II
AL539_01455	SSF53649	Alkaline phosphatase-like
AL539_01460	SSF46894	C-terminal effector domain of the bipartite response regulators
AL539_01475	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
AL539_01475	SSF47384	Homodimeric domain of signal transducing histidine kinase
AL539_01475	SSF52172	CheY-like
AL539_01475	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
AL539_01480	SSF53822	Periplasmic binding protein-like I
AL539_01485	SSF52335	Methylglyoxal synthase-like
AL539_01490	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_01510	SSF51120	beta-Roll
AL539_01530	SSF56935	Porins
AL539_01540	SSF46955	Putative DNA-binding domain
AL539_01545	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_01550	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
AL539_01555	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
AL539_01560	SSF53807	"Helical backbone" metal receptor
AL539_01565	SSF51206	cAMP-binding domain-like
AL539_01570	SSF53167	Purine and uridine phosphorylases
AL539_01585	SSF47413	lambda repressor-like DNA-binding domains
AL539_01585	SSF53822	Periplasmic binding protein-like I
AL539_01590	SSF53613	Ribokinase-like
AL539_01595	SSF53822	Periplasmic binding protein-like I
AL539_01605	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_01610	SSF102546	RbsD-like
AL539_01615	SSF141868	EAL domain-like
AL539_01615	SSF55073	Nucleotide cyclase
AL539_01670	SSF51735	NAD(P)-binding Rossmann-fold domains
AL539_01670	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
AL539_01675	SSF82784	OsmC-like
AL539_01680	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
AL539_01680	SSF47384	Homodimeric domain of signal transducing histidine kinase
AL539_01680	SSF52172	CheY-like
AL539_01680	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
AL539_01685	SSF46626	Cytochrome c
AL539_01690	SSF141322	NfeD domain-like
AL539_01690	SSF52096	ClpP/crotonase
AL539_01695	SSF117892	Band 7/SPFH domain
AL539_01700	SSF46458	Globin-like
AL539_01705	SSF55469	FMN-dependent nitroreductase-like
AL539_01710	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_01710	SSF54631	CBS-domain pair
AL539_01715	SSF161098	MetI-like
AL539_01720	SSF53850	Periplasmic binding protein-like II
AL539_01725	SSF51905	FAD/NAD(P)-binding domain
AL539_01725	SSF54373	FAD-linked reductases, C-terminal domain
AL539_01730	SSF53720	ALDH-like
AL539_01735	SSF46689	Homeodomain-like
AL539_01735	SSF48498	Tetracyclin repressor-like, C-terminal domain
AL539_01740	SSF48452	TPR-like
AL539_01740	SSF55073	Nucleotide cyclase
AL539_01745	SSF51735	NAD(P)-binding Rossmann-fold domains
AL539_01750	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
AL539_01750	SSF51735	NAD(P)-binding Rossmann-fold domains
AL539_01755	SSF52096	ClpP/crotonase
AL539_01760	SSF52096	ClpP/crotonase
AL539_01765	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
AL539_01765	SSF56645	Acyl-CoA dehydrogenase NM domain-like
AL539_01770	SSF53720	ALDH-like
AL539_01775	SSF53901	Thiolase-like
AL539_01780	SSF46955	Putative DNA-binding domain
AL539_01785	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
AL539_01785	SSF56645	Acyl-CoA dehydrogenase NM domain-like
AL539_01790	SSF52096	ClpP/crotonase
AL539_01795	SSF52096	ClpP/crotonase
AL539_01800	SSF51230	Single hybrid motif
AL539_01800	SSF51246	Rudiment single hybrid motif
AL539_01800	SSF52440	PreATP-grasp domain
AL539_01800	SSF56059	Glutathione synthetase ATP-binding domain-like
AL539_01805	SSF51569	Aldolase
AL539_01815	SSF50182	Sm-like ribonucleoproteins
AL539_01815	SSF82689	Mechanosensitive channel protein MscS (YggB), C-terminal domain
AL539_01815	SSF82861	Mechanosensitive channel protein MscS (YggB), transmembrane region
AL539_01825	SSF51161	Trimeric LpxA-like enzymes
AL539_01830	SSF46785	"Winged helix" DNA-binding domain
AL539_01830	SSF53383	PLP-dependent transferases
AL539_01855	SSF56784	HAD-like
AL539_01860	SSF46785	"Winged helix" DNA-binding domain
AL539_01860	SSF53850	Periplasmic binding protein-like II
AL539_01865	SSF117856	AF0104/ALDC/Ptd012-like
AL539_01870	SSF52467	DHS-like NAD/FAD-binding domain
AL539_01870	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
AL539_01875	SSF51735	NAD(P)-binding Rossmann-fold domains
AL539_01885	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
AL539_01895	SSF46626	Cytochrome c
AL539_01910	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
AL539_01915	SSF56801	Acetyl-CoA synthetase-like
AL539_01920	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_01925	SSF53822	Periplasmic binding protein-like I
AL539_01940	SSF56801	Acetyl-CoA synthetase-like
AL539_01945	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_01955	SSF51905	FAD/NAD(P)-binding domain
AL539_01955	SSF54373	FAD-linked reductases, C-terminal domain
AL539_01955	SSF54862	4Fe-4S ferredoxins
AL539_01960	SSF52402	Adenine nucleotide alpha hydrolases-like
AL539_01965	SSF52402	Adenine nucleotide alpha hydrolases-like
AL539_01965	SSF52467	DHS-like NAD/FAD-binding domain
AL539_01970	SSF56801	Acetyl-CoA synthetase-like
AL539_01975	SSF55604	Glucose permease domain IIB
AL539_01980	SSF51735	NAD(P)-binding Rossmann-fold domains
AL539_01980	SSF56327	LDH C-terminal domain-like
AL539_01985	SSF46785	"Winged helix" DNA-binding domain
AL539_01985	SSF64288	Chorismate lyase-like
AL539_02025	SSF52402	Adenine nucleotide alpha hydrolases-like
AL539_02030	SSF51735	NAD(P)-binding Rossmann-fold domains
AL539_02035	SSF46785	"Winged helix" DNA-binding domain
AL539_02035	SSF53850	Periplasmic binding protein-like II
AL539_02040	SSF46689	Homeodomain-like
AL539_02040	SSF51182	RmlC-like cupins
AL539_02045	SSF103473	MFS general substrate transporter
AL539_02055	SSF53955	Lysozyme-like
AL539_02080	SSF49879	SMAD/FHA domain
AL539_02085	SSF56925	OMPA-like
AL539_02100	SSF46785	"Winged helix" DNA-binding domain
AL539_02100	SSF54909	Dimeric alpha+beta barrel
AL539_02115	SSF160719	gpW/gp25-like
AL539_02135	SSF56112	Protein kinase-like (PK-like)
AL539_02160	SSF69255	gp5 N-terminal domain-like
AL539_02160	SSF69279	Phage tail proteins
AL539_02160	SSF69349	Phage fibre proteins
AL539_02165	SSF141452	Hcp1-like
AL539_02170	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_02170	SSF81923	Double Clp-N motif
AL539_02175	SSF46689	Homeodomain-like
AL539_02175	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_02175	SSF55781	GAF domain-like
AL539_02180	SSF103088	OmpA-like
AL539_02185	SSF69304	Tricorn protease N-terminal domain
AL539_02200	SSF51261	Duplicated hybrid motif
AL539_02225	SSF52794	PTS system IIB component-like
AL539_02225	SSF55804	Phoshotransferase/anion transport protein
AL539_02230	SSF52794	PTS system IIB component-like
AL539_02235	SSF55594	HPr-like
AL539_02235	SSF55804	Phoshotransferase/anion transport protein
AL539_02240	SSF46689	Homeodomain-like
AL539_02245	SSF52794	PTS system IIB component-like
AL539_02245	SSF55804	Phoshotransferase/anion transport protein
AL539_02250	SSF51182	RmlC-like cupins
AL539_02255	SSF55804	Phoshotransferase/anion transport protein
AL539_02260	SSF52794	PTS system IIB component-like
AL539_02265	SSF48208	Six-hairpin glycosidases
AL539_02270	SSF48208	Six-hairpin glycosidases
AL539_02275	SSF48208	Six-hairpin glycosidases
AL539_02280	SSF48208	Six-hairpin glycosidases
AL539_02285	SSF48208	Six-hairpin glycosidases
AL539_02310	SSF51412	Inosine monophosphate dehydrogenase (IMPDH)
AL539_02315	SSF53613	Ribokinase-like
AL539_02315	SSF64153	YjeF N-terminal domain-like
AL539_02320	SSF55785	PYP-like sensor domain (PAS domain)
AL539_02325	SSF103039	CheC-like
AL539_02325	SSF52172	CheY-like
AL539_02330	SSF51430	NAD(P)-linked oxidoreductase
AL539_02335	SSF47413	lambda repressor-like DNA-binding domains
AL539_02345	SSF81340	Clc chloride channel
AL539_02355	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
AL539_02360	SSF53218	Molybdenum cofactor biosynthesis proteins
AL539_02360	SSF63867	MoeA C-terminal domain-like
AL539_02360	SSF63882	MoeA N-terminal region -like
AL539_02365	SSF69572	Activating enzymes of the ubiquitin-like proteins
AL539_02370	SSF101898	NHL repeat
AL539_02380	SSF52821	Rhodanese/Cell cycle control phosphatase
AL539_02385	SSF100950	NagB/RpiA/CoA transferase-like
AL539_02400	SSF51569	Aldolase
AL539_02405	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
AL539_02405	SSF52922	TK C-terminal domain-like
AL539_02410	SSF55785	PYP-like sensor domain (PAS domain)
AL539_02410	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
AL539_02415	SSF103473	MFS general substrate transporter
AL539_02420	SSF51569	Aldolase
AL539_02430	SSF103088	OmpA-like
AL539_02430	SSF56925	OMPA-like
AL539_02435	SSF56784	HAD-like
AL539_02440	SSF75620	Release factor
AL539_02445	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
AL539_02450	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
AL539_02450	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
AL539_02450	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
AL539_02455	SSF111369	HlyD-like secretion proteins
AL539_02460	SSF53927	Cytidine deaminase-like
AL539_02465	SSF53187	Zn-dependent exopeptidases
AL539_02465	SSF55031	Bacterial exopeptidase dimerisation domain
AL539_02480	SSF46894	C-terminal effector domain of the bipartite response regulators
AL539_02480	SSF52172	CheY-like
AL539_02485	SSF158472	HAMP domain-like
AL539_02485	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
AL539_02490	SSF54862	4Fe-4S ferredoxins
AL539_02500	SSF50692	ADC-like
AL539_02500	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
AL539_02505	SSF48695	Multiheme cytochromes
AL539_02510	SSF48695	Multiheme cytochromes
AL539_02520	SSF53474	alpha/beta-Hydrolases
AL539_02530	SSF53901	Thiolase-like
AL539_02535	SSF51735	NAD(P)-binding Rossmann-fold domains
AL539_02550	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
AL539_02555	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
AL539_02580	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
AL539_02585	SSF46785	"Winged helix" DNA-binding domain
AL539_02585	SSF54909	Dimeric alpha+beta barrel
AL539_02590	SSF103481	Multidrug resistance efflux transporter EmrE
AL539_02595	SSF141371	PilZ domain-like
AL539_02605	SSF111369	HlyD-like secretion proteins
AL539_02610	SSF46785	"Winged helix" DNA-binding domain
AL539_02615	SSF103190	Sensory domain-like
AL539_02615	SSF47384	Homodimeric domain of signal transducing histidine kinase
AL539_02615	SSF52172	CheY-like
AL539_02615	SSF55785	PYP-like sensor domain (PAS domain)
AL539_02615	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
AL539_02620	SSF53822	Periplasmic binding protein-like I
AL539_02630	SSF82771	GIY-YIG endonuclease
AL539_02635	SSF46785	"Winged helix" DNA-binding domain
AL539_02655	SSF47384	Homodimeric domain of signal transducing histidine kinase
AL539_02655	SSF52172	CheY-like
AL539_02655	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
AL539_02660	SSF51735	NAD(P)-binding Rossmann-fold domains
AL539_02660	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
AL539_02680	SSF46785	"Winged helix" DNA-binding domain
AL539_02680	SSF53850	Periplasmic binding protein-like II
AL539_02685	SSF46785	"Winged helix" DNA-binding domain
AL539_02685	SSF54909	Dimeric alpha+beta barrel
AL539_02700	SSF46785	"Winged helix" DNA-binding domain
AL539_02700	SSF53383	PLP-dependent transferases
AL539_02705	SSF50475	FMN-binding split barrel
AL539_02710	SSF47384	Homodimeric domain of signal transducing histidine kinase
AL539_02710	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
AL539_02715	SSF46894	C-terminal effector domain of the bipartite response regulators
AL539_02715	SSF52172	CheY-like
AL539_02735	SSF46689	Homeodomain-like
AL539_02745	SSF111369	HlyD-like secretion proteins
AL539_02750	SSF56112	Protein kinase-like (PK-like)
AL539_02755	SSF158791	MgtE N-terminal domain-like
AL539_02755	SSF161093	MgtE membrane domain-like
AL539_02755	SSF54631	CBS-domain pair
AL539_02765	SSF51338	Composite domain of metallo-dependent hydrolases
AL539_02765	SSF51556	Metallo-dependent hydrolases
AL539_02770	SSF109604	HD-domain/PDEase-like
AL539_02775	SSF47413	lambda repressor-like DNA-binding domains
AL539_02785	SSF103473	MFS general substrate transporter
AL539_02785	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
AL539_02790	SSF53474	alpha/beta-Hydrolases
AL539_02795	SSF55821	YrdC/RibB
AL539_02800	SSF52833	Thioredoxin-like
AL539_02815	SSF52833	Thioredoxin-like
AL539_02825	SSF81296	E set domains
AL539_02830	SSF46894	C-terminal effector domain of the bipartite response regulators
AL539_02830	SSF52172	CheY-like
AL539_02835	SSF158472	HAMP domain-like
AL539_02835	SSF47384	Homodimeric domain of signal transducing histidine kinase
AL539_02835	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
AL539_02850	SSF53649	Alkaline phosphatase-like
AL539_02855	SSF51735	NAD(P)-binding Rossmann-fold domains
AL539_02855	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
AL539_02870	SSF52151	FabD/lysophospholipase-like
AL539_02875	SSF51182	RmlC-like cupins
AL539_02880	SSF50249	Nucleic acid-binding proteins
AL539_02895	SSF51556	Metallo-dependent hydrolases
AL539_02900	SSF52833	Thioredoxin-like
AL539_02905	SSF110997	Sporulation related repeat
AL539_02910	SSF56601	beta-lactamase/transpeptidase-like
AL539_02910	SSF69189	Penicillin-binding protein associated domain
AL539_02920	SSF47616	GST C-terminal domain-like
AL539_02920	SSF52833	Thioredoxin-like
AL539_02930	SSF49899	Concanavalin A-like lectins/glucanases
AL539_02930	SSF75005	Arabinanase/levansucrase/invertase
AL539_02935	SSF53613	Ribokinase-like
AL539_02940	SSF55604	Glucose permease domain IIB
AL539_02945	SSF47413	lambda repressor-like DNA-binding domains
AL539_02945	SSF53822	Periplasmic binding protein-like I
AL539_02950	SSF56935	Porins
AL539_02965	SSF51735	NAD(P)-binding Rossmann-fold domains
AL539_02970	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
AL539_02975	SSF53807	"Helical backbone" metal receptor
AL539_02980	SSF56935	Porins
AL539_02985	SSF51182	RmlC-like cupins
AL539_02995	SSF51735	NAD(P)-binding Rossmann-fold domains
AL539_03000	SSF46785	"Winged helix" DNA-binding domain
AL539_03000	SSF53850	Periplasmic binding protein-like II
AL539_03005	SSF46689	Homeodomain-like
AL539_03005	SSF55136	Probable bacterial effector-binding domain
AL539_03010	SSF53383	PLP-dependent transferases
AL539_03030	SSF55681	Class II aaRS and biotin synthetases
AL539_03040	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_03045	SSF48208	Six-hairpin glycosidases
AL539_03050	SSF46785	"Winged helix" DNA-binding domain
AL539_03050	SSF53850	Periplasmic binding protein-like II
AL539_03055	SSF46785	"Winged helix" DNA-binding domain
AL539_03055	SSF53850	Periplasmic binding protein-like II
AL539_03060	SSF47616	GST C-terminal domain-like
AL539_03060	SSF52833	Thioredoxin-like
AL539_03065	SSF51395	FMN-linked oxidoreductases
AL539_03070	SSF50129	GroES-like
AL539_03070	SSF51735	NAD(P)-binding Rossmann-fold domains
AL539_03075	SSF51182	RmlC-like cupins
AL539_03080	SSF51735	NAD(P)-binding Rossmann-fold domains
AL539_03085	SSF46689	Homeodomain-like
AL539_03095	SSF53092	Creatinase/prolidase N-terminal domain
AL539_03095	SSF55920	Creatinase/aminopeptidase
AL539_03100	SSF53187	Zn-dependent exopeptidases
AL539_03105	SSF46785	"Winged helix" DNA-binding domain
AL539_03105	SSF54909	Dimeric alpha+beta barrel
AL539_03110	SSF53720	ALDH-like
AL539_03115	SSF53383	PLP-dependent transferases
AL539_03135	SSF46785	"Winged helix" DNA-binding domain
AL539_03135	SSF53850	Periplasmic binding protein-like II
AL539_03140	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_03145	SSF53774	Glutaminase/Asparaginase
AL539_03155	SSF51621	Phosphoenolpyruvate/pyruvate domain
AL539_03155	SSF52009	Phosphohistidine domain
AL539_03155	SSF56059	Glutathione synthetase ATP-binding domain-like
AL539_03165	SSF46894	C-terminal effector domain of the bipartite response regulators
AL539_03170	SSF52374	Nucleotidylyl transferase
AL539_03170	SSF55174	Alpha-L RNA-binding motif
AL539_03175	SSF53850	Periplasmic binding protein-like II
AL539_03190	SSF49303	beta-Galactosidase/glucuronidase domain
AL539_03190	SSF49785	Galactose-binding domain-like
AL539_03190	SSF51445	(Trans)glycosidases
AL539_03200	SSF46785	"Winged helix" DNA-binding domain
AL539_03200	SSF64288	Chorismate lyase-like
AL539_03205	SSF53850	Periplasmic binding protein-like II
AL539_03210	SSF53649	Alkaline phosphatase-like
AL539_03215	SSF161098	MetI-like
AL539_03220	SSF161098	MetI-like
AL539_03225	SSF50331	MOP-like
AL539_03225	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_03230	SSF56784	HAD-like
AL539_03235	SSF46689	Homeodomain-like
AL539_03235	SSF48498	Tetracyclin repressor-like, C-terminal domain
AL539_03240	SSF111369	HlyD-like secretion proteins
AL539_03245	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
AL539_03245	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
AL539_03245	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
AL539_03265	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
AL539_03265	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
AL539_03265	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
AL539_03270	SSF111369	HlyD-like secretion proteins
AL539_03275	SSF56024	Phospholipase D/nuclease
AL539_03280	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
AL539_03285	SSF88697	PUA domain-like
AL539_03290	SSF48452	TPR-like
AL539_03300	SSF46955	Putative DNA-binding domain
AL539_03305	SSF103473	MFS general substrate transporter
AL539_03315	SSF46785	"Winged helix" DNA-binding domain
AL539_03315	SSF53850	Periplasmic binding protein-like II
AL539_03320	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_03325	SSF51604	Enolase C-terminal domain-like
AL539_03325	SSF54826	Enolase N-terminal domain-like
AL539_03335	SSF50447	Translation proteins
AL539_03335	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_03335	SSF54211	Ribosomal protein S5 domain 2-like
AL539_03335	SSF54980	EF-G C-terminal domain-like
AL539_03345	SSF56112	Protein kinase-like (PK-like)
AL539_03355	SSF53146	Nitrogenase accessory factor-like
AL539_03360	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
AL539_03370	SSF161098	MetI-like
AL539_03375	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_03375	SSF54631	CBS-domain pair
AL539_03390	SSF53850	Periplasmic binding protein-like II
AL539_03395	SSF56925	OMPA-like
AL539_03400	SSF46785	"Winged helix" DNA-binding domain
AL539_03400	SSF53850	Periplasmic binding protein-like II
AL539_03405	SSF103481	Multidrug resistance efflux transporter EmrE
AL539_03410	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
AL539_03425	SSF51690	Nicotinate/Quinolinate PRTase C-terminal domain-like
AL539_03425	SSF54675	Nicotinate/Quinolinate PRTase N-terminal domain-like
AL539_03430	SSF55811	Nudix
AL539_03435	SSF52499	Isochorismatase-like hydrolases
AL539_03440	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
AL539_03445	SSF103481	Multidrug resistance efflux transporter EmrE
AL539_03450	SSF100950	NagB/RpiA/CoA transferase-like
AL539_03450	SSF46785	"Winged helix" DNA-binding domain
AL539_03455	SSF55068	Peptide methionine sulfoxide reductase
AL539_03460	SSF51412	Inosine monophosphate dehydrogenase (IMPDH)
AL539_03480	SSF46689	Homeodomain-like
AL539_03485	SSF46689	Homeodomain-like
AL539_03495	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
AL539_03500	SSF46785	"Winged helix" DNA-binding domain
AL539_03500	SSF53850	Periplasmic binding protein-like II
AL539_03515	SSF48592	GroEL equatorial domain-like
AL539_03515	SSF52029	GroEL apical domain-like
AL539_03515	SSF54849	GroEL-intermediate domain like
AL539_03520	SSF50129	GroES-like
AL539_03525	SSF52821	Rhodanese/Cell cycle control phosphatase
AL539_03530	SSF51316	Mss4-like
AL539_03540	SSF51395	FMN-linked oxidoreductases
AL539_03545	SSF51735	NAD(P)-binding Rossmann-fold domains
AL539_03555	SSF64518	Phase 1 flagellin
AL539_03560	SSF64518	Phase 1 flagellin
AL539_03565	SSF64518	Phase 1 flagellin
AL539_03585	SSF117143	Flagellar hook protein flgE
AL539_03590	SSF117143	Flagellar hook protein flgE
AL539_03595	SSF117143	Flagellar hook protein flgE
AL539_03620	SSF101498	Anti-sigma factor FlgM
AL539_03625	SSF140566	FlgN-like
AL539_03630	SSF53955	Lysozyme-like
AL539_03635	SSF55811	Nudix
AL539_03655	SSF143548	Serine metabolism enzymes domain
AL539_03665	SSF46785	"Winged helix" DNA-binding domain
AL539_03665	SSF53850	Periplasmic binding protein-like II
AL539_03670	SSF46785	"Winged helix" DNA-binding domain
AL539_03670	SSF53850	Periplasmic binding protein-like II
AL539_03675	SSF103088	OmpA-like
AL539_03675	SSF56925	OMPA-like
AL539_03680	SSF53187	Zn-dependent exopeptidases
AL539_03685	SSF51905	FAD/NAD(P)-binding domain
AL539_03700	SSF56925	OMPA-like
AL539_03705	SSF103481	Multidrug resistance efflux transporter EmrE
AL539_03710	SSF46785	"Winged helix" DNA-binding domain
AL539_03710	SSF64288	Chorismate lyase-like
AL539_03715	SSF161098	MetI-like
AL539_03720	SSF50331	MOP-like
AL539_03720	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_03725	SSF53850	Periplasmic binding protein-like II
AL539_03730	SSF53383	PLP-dependent transferases
AL539_03735	SSF53383	PLP-dependent transferases
AL539_03740	SSF56784	HAD-like
AL539_03750	SSF49785	Galactose-binding domain-like
AL539_03750	SSF52743	Subtilisin-like
AL539_03755	SSF52266	SGNH hydrolase
AL539_03760	SSF46689	Homeodomain-like
AL539_03760	SSF48498	Tetracyclin repressor-like, C-terminal domain
AL539_03765	SSF69118	AhpD-like
AL539_03770	SSF56954	Outer membrane efflux proteins (OEP)
AL539_03775	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_03795	SSF56935	Porins
AL539_03800	SSF51069	Carbonic anhydrase
AL539_03815	SSF55811	Nudix
AL539_03820	SSF56784	HAD-like
AL539_03825	SSF46785	"Winged helix" DNA-binding domain
AL539_03825	SSF53850	Periplasmic binding protein-like II
AL539_03830	SSF54909	Dimeric alpha+beta barrel
AL539_03835	SSF46785	"Winged helix" DNA-binding domain
AL539_03860	SSF51161	Trimeric LpxA-like enzymes
AL539_03865	SSF82784	OsmC-like
AL539_03870	SSF51316	Mss4-like
AL539_03870	SSF55068	Peptide methionine sulfoxide reductase
AL539_03880	SSF51735	NAD(P)-binding Rossmann-fold domains
AL539_03885	SSF48173	Cryptochrome/photolyase FAD-binding domain
AL539_03890	SSF48173	Cryptochrome/photolyase FAD-binding domain
AL539_03890	SSF52425	Cryptochrome/photolyase, N-terminal domain
AL539_03895	SSF55073	Nucleotide cyclase
AL539_03900	SSF51645	Malate synthase G
AL539_03905	SSF47413	lambda repressor-like DNA-binding domains
AL539_03910	SSF55073	Nucleotide cyclase
AL539_03915	SSF51197	Clavaminate synthase-like
AL539_03945	SSF53383	PLP-dependent transferases
AL539_03970	SSF54403	Cystatin/monellin
AL539_03975	SSF51905	FAD/NAD(P)-binding domain
AL539_03985	SSF53850	Periplasmic binding protein-like II
AL539_04000	SSF55073	Nucleotide cyclase
AL539_04005	SSF46689	Homeodomain-like
AL539_04005	SSF52172	CheY-like
AL539_04005	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_04010	SSF47384	Homodimeric domain of signal transducing histidine kinase
AL539_04010	SSF55785	PYP-like sensor domain (PAS domain)
AL539_04010	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
AL539_04015	SSF51445	(Trans)glycosidases
AL539_04020	SSF63829	Calcium-dependent phosphotriesterase
AL539_04030	SSF46785	"Winged helix" DNA-binding domain
AL539_04030	SSF53850	Periplasmic binding protein-like II
AL539_04040	SSF56281	Metallo-hydrolase/oxidoreductase
AL539_04045	SSF46689	Homeodomain-like
AL539_04055	SSF56059	Glutathione synthetase ATP-binding domain-like
AL539_04060	SSF50630	Acid proteases
AL539_04065	SSF56281	Metallo-hydrolase/oxidoreductase
AL539_04070	SSF51419	PLP-binding barrel
AL539_04075	SSF52768	Arginase/deacetylase
AL539_04080	SSF103473	MFS general substrate transporter
AL539_04085	SSF50993	Peptidase/esterase 'gauge' domain
AL539_04085	SSF53474	alpha/beta-Hydrolases
AL539_04090	SSF56935	Porins
AL539_04095	SSF53807	"Helical backbone" metal receptor
AL539_04100	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
AL539_04105	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_04110	SSF53807	"Helical backbone" metal receptor
AL539_04140	SSF48452	TPR-like
AL539_04145	SSF74653	TolA/TonB C-terminal domain
AL539_04170	SSF56935	Porins
AL539_04175	SSF158472	HAMP domain-like
AL539_04175	SSF47384	Homodimeric domain of signal transducing histidine kinase
AL539_04175	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
AL539_04180	SSF46894	C-terminal effector domain of the bipartite response regulators
AL539_04180	SSF52172	CheY-like
AL539_04185	SSF51695	PLC-like phosphodiesterases
AL539_04190	SSF141523	L,D-transpeptidase catalytic domain-like
AL539_04195	SSF51735	NAD(P)-binding Rossmann-fold domains
AL539_04195	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
AL539_04255	SSF75217	alpha/beta knot
AL539_04260	SSF111283	Putative modulator of DNA gyrase, PmbA/TldD
AL539_04265	SSF111283	Putative modulator of DNA gyrase, PmbA/TldD
AL539_04270	SSF53613	Ribokinase-like
AL539_04275	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_04280	SSF161098	MetI-like
AL539_04285	SSF53850	Periplasmic binding protein-like II
AL539_04290	SSF48613	Heme oxygenase-like
AL539_04295	SSF53613	Ribokinase-like
AL539_04300	SSF51391	Thiamin phosphate synthase
AL539_04305	SSF48317	Acid phosphatase/Vanadium-dependent haloperoxidase
AL539_04310	SSF50692	ADC-like
AL539_04310	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
AL539_04315	SSF48695	Multiheme cytochromes
AL539_04320	SSF55729	Acyl-CoA N-acyltransferases (Nat)
AL539_04325	SSF51735	NAD(P)-binding Rossmann-fold domains
AL539_04330	SSF55729	Acyl-CoA N-acyltransferases (Nat)
AL539_04335	SSF56784	HAD-like
AL539_04340	SSF55729	Acyl-CoA N-acyltransferases (Nat)
AL539_04345	SSF54523	Pili subunits
AL539_04355	SSF103481	Multidrug resistance efflux transporter EmrE
AL539_04360	SSF46785	"Winged helix" DNA-binding domain
AL539_04360	SSF53383	PLP-dependent transferases
AL539_04365	SSF110738	Glycerate kinase I
AL539_04375	SSF46689	Homeodomain-like
AL539_04390	SSF55486	Metalloproteases ("zincins"), catalytic domain
AL539_04395	SSF48452	TPR-like
AL539_04405	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
AL539_04410	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
AL539_04415	SSF56281	Metallo-hydrolase/oxidoreductase
AL539_04420	SSF101744	Rof/RNase P subunit-like
AL539_04425	SSF103473	MFS general substrate transporter
AL539_04430	SSF111369	HlyD-like secretion proteins
AL539_04435	SSF56925	OMPA-like
AL539_04440	SSF141571	Pentapeptide repeat-like
AL539_04445	SSF51182	RmlC-like cupins
AL539_04450	SSF56784	HAD-like
AL539_04455	SSF51055	Carbohydrate binding domain
AL539_04455	SSF81296	E set domains
AL539_04460	SSF46785	"Winged helix" DNA-binding domain
AL539_04460	SSF54909	Dimeric alpha+beta barrel
AL539_04470	SSF63380	Riboflavin synthase domain-like
AL539_04475	SSF46785	"Winged helix" DNA-binding domain
AL539_04475	SSF53850	Periplasmic binding protein-like II
AL539_04480	SSF54001	Cysteine proteinases
AL539_04485	SSF50129	GroES-like
AL539_04485	SSF51735	NAD(P)-binding Rossmann-fold domains
AL539_04490	SSF53474	alpha/beta-Hydrolases
AL539_04495	SSF56524	Oxidoreductase molybdopterin-binding domain
AL539_04500	SSF55073	Nucleotide cyclase
AL539_04510	SSF56784	HAD-like
AL539_04515	SSF46785	"Winged helix" DNA-binding domain
AL539_04515	SSF53850	Periplasmic binding protein-like II
AL539_04520	SSF56281	Metallo-hydrolase/oxidoreductase
AL539_04525	SSF52833	Thioredoxin-like
AL539_04530	SSF55120	Pseudouridine synthase
AL539_04540	SSF55073	Nucleotide cyclase
AL539_04550	SSF51182	RmlC-like cupins
AL539_04575	SSF53474	alpha/beta-Hydrolases
AL539_04580	SSF46689	Homeodomain-like
AL539_04580	SSF48498	Tetracyclin repressor-like, C-terminal domain
AL539_04595	SSF51316	Mss4-like
AL539_04610	SSF46767	Methylated DNA-protein cysteine methyltransferase, C-terminal domain
AL539_04610	SSF53155	Methylated DNA-protein cysteine methyltransferase domain
AL539_04615	SSF46689	Homeodomain-like
AL539_04615	SSF48150	DNA-glycosylase
AL539_04615	SSF55945	TATA-box binding protein-like
AL539_04615	SSF57884	Ada DNA repair protein, N-terminal domain (N-Ada 10)
AL539_04630	SSF51182	RmlC-like cupins
AL539_04635	SSF46785	"Winged helix" DNA-binding domain
AL539_04635	SSF53850	Periplasmic binding protein-like II
AL539_04650	SSF100950	NagB/RpiA/CoA transferase-like
AL539_04665	SSF46785	"Winged helix" DNA-binding domain
AL539_04670	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_04695	SSF52833	Thioredoxin-like
AL539_04700	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
AL539_04705	SSF50891	Cyclophilin-like
AL539_04715	SSF52172	CheY-like
AL539_04720	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
AL539_04740	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_04755	SSF75625	YebC-like
AL539_04760	SSF46575	DNA polymerase III theta subunit-like
AL539_04765	SSF47384	Homodimeric domain of signal transducing histidine kinase
AL539_04765	SSF52172	CheY-like
AL539_04765	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
AL539_04770	SSF53850	Periplasmic binding protein-like II
AL539_04775	SSF142695	RibA-like
AL539_04775	SSF143990	YbiA-like
AL539_04785	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_04790	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_04805	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_04810	SSF109709	KorB DNA-binding domain-like
AL539_04810	SSF110849	ParB/Sulfiredoxin
AL539_04815	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_04815	SSF55729	Acyl-CoA N-acyltransferases (Nat)
AL539_04825	SSF51161	Trimeric LpxA-like enzymes
AL539_04830	SSF46785	"Winged helix" DNA-binding domain
AL539_04830	SSF53850	Periplasmic binding protein-like II
AL539_04840	SSF56935	Porins
AL539_04845	SSF55604	Glucose permease domain IIB
AL539_04850	SSF53697	SIS domain
AL539_04860	SSF46689	Homeodomain-like
AL539_04860	SSF53697	SIS domain
AL539_04865	SSF53187	Zn-dependent exopeptidases
AL539_04870	SSF53850	Periplasmic binding protein-like II
AL539_04875	SSF52218	Flavoproteins
AL539_04885	SSF50182	Sm-like ribonucleoproteins
AL539_04890	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_04890	SSF90123	ABC transporter transmembrane region
AL539_04895	SSF141868	EAL domain-like
AL539_04895	SSF55073	Nucleotide cyclase
AL539_04905	SSF111369	HlyD-like secretion proteins
AL539_04905	SSF56954	Outer membrane efflux proteins (OEP)
AL539_04910	SSF46689	Homeodomain-like
AL539_04910	SSF52172	CheY-like
AL539_04910	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_04915	SSF103190	Sensory domain-like
AL539_04915	SSF47384	Homodimeric domain of signal transducing histidine kinase
AL539_04915	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
AL539_04920	SSF50475	FMN-binding split barrel
AL539_04925	SSF46894	C-terminal effector domain of the bipartite response regulators
AL539_04925	SSF55785	PYP-like sensor domain (PAS domain)
AL539_04930	SSF46689	Homeodomain-like
AL539_04930	SSF51215	Regulatory protein AraC
AL539_04935	SSF51730	FAD-linked oxidoreductase
AL539_04935	SSF53720	ALDH-like
AL539_04935	SSF81935	N-terminal domain of bifunctional PutA protein
AL539_04940	SSF53720	ALDH-like
AL539_04950	SSF55729	Acyl-CoA N-acyltransferases (Nat)
AL539_04955	SSF54928	RNA-binding domain, RBD
AL539_04965	SSF55729	Acyl-CoA N-acyltransferases (Nat)
AL539_04975	SSF46785	"Winged helix" DNA-binding domain
AL539_04975	SSF54909	Dimeric alpha+beta barrel
AL539_04985	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_04985	SSF90123	ABC transporter transmembrane region
AL539_04990	SSF55909	Pentein
AL539_04995	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_05000	SSF50800	PK beta-barrel domain-like
AL539_05005	SSF46689	Homeodomain-like
AL539_05005	SSF51182	RmlC-like cupins
AL539_05010	SSF50129	GroES-like
AL539_05010	SSF51735	NAD(P)-binding Rossmann-fold domains
AL539_05020	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
AL539_05020	SSF88946	Sigma2 domain of RNA polymerase sigma factors
AL539_05025	SSF52317	Class I glutamine amidotransferase-like
AL539_05035	SSF46785	"Winged helix" DNA-binding domain
AL539_05035	SSF53850	Periplasmic binding protein-like II
AL539_05040	SSF55797	PR-1-like
AL539_05045	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
AL539_05055	SSF51905	FAD/NAD(P)-binding domain
AL539_05055	SSF52833	Thioredoxin-like
AL539_05060	SSF52833	Thioredoxin-like
AL539_05065	SSF46785	"Winged helix" DNA-binding domain
AL539_05070	SSF82784	OsmC-like
AL539_05075	SSF143120	YefM-like
AL539_05085	SSF48452	TPR-like
AL539_05090	SSF46689	Homeodomain-like
AL539_05090	SSF55136	Probable bacterial effector-binding domain
AL539_05095	SSF46689	Homeodomain-like
AL539_05100	SSF55729	Acyl-CoA N-acyltransferases (Nat)
AL539_05110	SSF159245	AttH-like
AL539_05120	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_05135	SSF103247	TT1751-like
AL539_05140	SSF50621	Alanine racemase C-terminal domain-like
AL539_05140	SSF51419	PLP-binding barrel
AL539_05150	SSF103473	MFS general substrate transporter
AL539_05160	SSF56059	Glutathione synthetase ATP-binding domain-like
AL539_05165	SSF56935	Porins
AL539_05170	SSF56935	Porins
AL539_05175	SSF53807	"Helical backbone" metal receptor
AL539_05180	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
AL539_05185	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
AL539_05190	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_05195	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
AL539_05200	SSF63411	LuxS/MPP-like metallohydrolase
AL539_05210	SSF51261	Duplicated hybrid motif
AL539_05220	SSF55961	Bet v1-like
AL539_05225	SSF103473	MFS general substrate transporter
AL539_05230	SSF53041	Resolvase-like
AL539_05235	SSF47413	lambda repressor-like DNA-binding domains
AL539_05235	SSF53822	Periplasmic binding protein-like I
AL539_05245	SSF54427	NTF2-like
AL539_05250	SSF54427	NTF2-like
AL539_05270	SSF47413	lambda repressor-like DNA-binding domains
AL539_05270	SSF53822	Periplasmic binding protein-like I
AL539_05275	SSF51621	Phosphoenolpyruvate/pyruvate domain
AL539_05280	SSF53720	ALDH-like
AL539_05285	SSF51735	NAD(P)-binding Rossmann-fold domains
AL539_05290	SSF51182	RmlC-like cupins
AL539_05295	SSF53474	alpha/beta-Hydrolases
AL539_05300	SSF56935	Porins
AL539_05305	SSF54427	NTF2-like
AL539_05310	SSF103473	MFS general substrate transporter
AL539_05320	SSF143548	Serine metabolism enzymes domain
AL539_05325	SSF51011	Glycosyl hydrolase domain
AL539_05325	SSF51445	(Trans)glycosidases
AL539_05325	SSF81296	E set domains
AL539_05330	SSF56935	Porins
AL539_05345	SSF51011	Glycosyl hydrolase domain
AL539_05345	SSF51445	(Trans)glycosidases
AL539_05350	SSF49785	Galactose-binding domain-like
AL539_05350	SSF54060	His-Me finger endonucleases
AL539_05355	SSF49452	Starch-binding domain-like
AL539_05355	SSF51011	Glycosyl hydrolase domain
AL539_05355	SSF51445	(Trans)glycosidases
AL539_05355	SSF81296	E set domains
AL539_05360	SSF81901	HCP-like
AL539_05365	SSF89447	AbrB/MazE/MraZ-like
AL539_05370	SSF53613	Ribokinase-like
AL539_05375	SSF118215	Proton glutamate symport protein
AL539_05380	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_05385	SSF55604	Glucose permease domain IIB
AL539_05390	SSF52833	Thioredoxin-like
AL539_05405	SSF46894	C-terminal effector domain of the bipartite response regulators
AL539_05405	SSF48452	TPR-like
AL539_05405	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_05410	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
AL539_05415	SSF51445	(Trans)glycosidases
AL539_05420	SSF51011	Glycosyl hydrolase domain
AL539_05420	SSF51445	(Trans)glycosidases
AL539_05420	SSF81296	E set domains
AL539_05425	SSF53955	Lysozyme-like
AL539_05430	SSF51445	(Trans)glycosidases
AL539_05435	SSF52833	Thioredoxin-like
AL539_05455	SSF53187	Zn-dependent exopeptidases
AL539_05455	SSF55031	Bacterial exopeptidase dimerisation domain
AL539_05475	SSF118215	Proton glutamate symport protein
AL539_05485	SSF46785	"Winged helix" DNA-binding domain
AL539_05485	SSF53850	Periplasmic binding protein-like II
AL539_05490	SSF54909	Dimeric alpha+beta barrel
AL539_05515	SSF52788	Phosphotyrosine protein phosphatases I
AL539_05525	SSF55469	FMN-dependent nitroreductase-like
AL539_05535	SSF52151	FabD/lysophospholipase-like
AL539_05540	SSF81296	E set domains
AL539_05545	SSF82153	FAS1 domain
AL539_05550	SSF48173	Cryptochrome/photolyase FAD-binding domain
AL539_05550	SSF52425	Cryptochrome/photolyase, N-terminal domain
AL539_05560	SSF52821	Rhodanese/Cell cycle control phosphatase
AL539_05565	SSF53474	alpha/beta-Hydrolases
AL539_05570	SSF56601	beta-lactamase/transpeptidase-like
AL539_05570	SSF69189	Penicillin-binding protein associated domain
AL539_05575	SSF49344	CBD9-like
AL539_05575	SSF51011	Glycosyl hydrolase domain
AL539_05575	SSF51445	(Trans)glycosidases
AL539_05580	SSF46689	Homeodomain-like
AL539_05585	SSF55469	FMN-dependent nitroreductase-like
AL539_05590	SSF54909	Dimeric alpha+beta barrel
AL539_05595	SSF46785	"Winged helix" DNA-binding domain
AL539_05595	SSF53850	Periplasmic binding protein-like II
AL539_05605	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
AL539_05610	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
AL539_05610	SSF63380	Riboflavin synthase domain-like
AL539_05630	SSF81324	Voltage-gated potassium channels
AL539_05635	SSF111369	HlyD-like secretion proteins
AL539_05645	SSF56954	Outer membrane efflux proteins (OEP)
AL539_05660	SSF103481	Multidrug resistance efflux transporter EmrE
AL539_05665	SSF46785	"Winged helix" DNA-binding domain
AL539_05665	SSF53850	Periplasmic binding protein-like II
AL539_05670	SSF103473	MFS general substrate transporter
AL539_05675	SSF55729	Acyl-CoA N-acyltransferases (Nat)
AL539_05680	SSF55729	Acyl-CoA N-acyltransferases (Nat)
AL539_05690	SSF46894	C-terminal effector domain of the bipartite response regulators
AL539_05690	SSF52172	CheY-like
AL539_05695	SSF103190	Sensory domain-like
AL539_05695	SSF47384	Homodimeric domain of signal transducing histidine kinase
AL539_05695	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
AL539_05710	SSF51569	Aldolase
AL539_05715	SSF102114	Radical SAM enzymes
AL539_05720	SSF51998	PFL-like glycyl radical enzymes
AL539_05725	SSF46689	Homeodomain-like
AL539_05725	SSF48498	Tetracyclin repressor-like, C-terminal domain
AL539_05740	SSF50729	PH domain-like
AL539_05755	SSF103088	OmpA-like
AL539_05765	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
AL539_05765	SSF88946	Sigma2 domain of RNA polymerase sigma factors
AL539_05785	SSF101116	Flagellar export chaperone FliS
AL539_05800	SSF64518	Phase 1 flagellin
AL539_05805	SSF141868	EAL domain-like
AL539_05815	SSF160544	EscU C-terminal domain-like
AL539_05835	SSF101801	Surface presentation of antigens (SPOA)
AL539_05840	SSF101801	Surface presentation of antigens (SPOA)
AL539_05845	SSF103088	OmpA-like
AL539_05850	SSF46689	Homeodomain-like
AL539_05850	SSF52172	CheY-like
AL539_05850	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_05865	SSF48029	FliG
AL539_05870	SSF160527	V-type ATPase subunit E-like
AL539_05875	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_05885	SSF50494	Trypsin-like serine proteases
AL539_05890	SSF46785	"Winged helix" DNA-binding domain
AL539_05890	SSF53850	Periplasmic binding protein-like II
AL539_05895	SSF103481	Multidrug resistance efflux transporter EmrE
AL539_05900	SSF55961	Bet v1-like
AL539_05905	SSF89550	PHP domain-like
AL539_05910	SSF47175	Cytochromes
AL539_05925	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
AL539_05930	SSF46785	"Winged helix" DNA-binding domain
AL539_05930	SSF53850	Periplasmic binding protein-like II
AL539_05950	SSF46894	C-terminal effector domain of the bipartite response regulators
AL539_05950	SSF52172	CheY-like
AL539_05955	SSF47384	Homodimeric domain of signal transducing histidine kinase
AL539_05955	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
AL539_05960	SSF49329	Cu,Zn superoxide dismutase-like
AL539_05965	SSF53383	PLP-dependent transferases
AL539_05970	SSF53850	Periplasmic binding protein-like II
AL539_05975	SSF141868	EAL domain-like
AL539_05975	SSF55073	Nucleotide cyclase
AL539_05980	SSF53383	PLP-dependent transferases
AL539_05985	SSF50129	GroES-like
AL539_05985	SSF51735	NAD(P)-binding Rossmann-fold domains
AL539_06000	SSF49354	PapD-like
AL539_06015	SSF51069	Carbonic anhydrase
AL539_06020	SSF50182	Sm-like ribonucleoproteins
AL539_06020	SSF82689	Mechanosensitive channel protein MscS (YggB), C-terminal domain
AL539_06020	SSF82861	Mechanosensitive channel protein MscS (YggB), transmembrane region
AL539_06025	SSF47413	lambda repressor-like DNA-binding domains
AL539_06030	SSF51395	FMN-linked oxidoreductases
AL539_06040	SSF46785	"Winged helix" DNA-binding domain
AL539_06040	SSF53850	Periplasmic binding protein-like II
AL539_06045	SSF50993	Peptidase/esterase 'gauge' domain
AL539_06045	SSF53474	alpha/beta-Hydrolases
AL539_06050	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_06060	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_06060	SSF54211	Ribosomal protein S5 domain 2-like
AL539_06065	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
AL539_06070	SSF56935	Porins
AL539_06075	SSF141371	PilZ domain-like
AL539_06080	SSF55729	Acyl-CoA N-acyltransferases (Nat)
AL539_06085	SSF56112	Protein kinase-like (PK-like)
AL539_06090	SSF55729	Acyl-CoA N-acyltransferases (Nat)
AL539_06095	SSF54862	4Fe-4S ferredoxins
AL539_06100	SSF54862	4Fe-4S ferredoxins
AL539_06105	SSF103473	MFS general substrate transporter
AL539_06120	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_06130	SSF111369	HlyD-like secretion proteins
AL539_06140	SSF48452	TPR-like
AL539_06140	SSF55073	Nucleotide cyclase
AL539_06145	SSF48452	TPR-like
AL539_06155	SSF53167	Purine and uridine phosphorylases
AL539_06165	SSF46955	Putative DNA-binding domain
AL539_06170	SSF48173	Cryptochrome/photolyase FAD-binding domain
AL539_06170	SSF52425	Cryptochrome/photolyase, N-terminal domain
AL539_06175	SSF141523	L,D-transpeptidase catalytic domain-like
AL539_06175	SSF54106	LysM domain
AL539_06180	SSF58042	Outer membrane lipoprotein
AL539_06185	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_06190	SSF50993	Peptidase/esterase 'gauge' domain
AL539_06190	SSF53474	alpha/beta-Hydrolases
AL539_06195	SSF56935	Porins
AL539_06200	SSF49785	Galactose-binding domain-like
AL539_06200	SSF55486	Metalloproteases ("zincins"), catalytic domain
AL539_06215	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
AL539_06220	SSF53850	Periplasmic binding protein-like II
AL539_06225	SSF161098	MetI-like
AL539_06230	SSF161098	MetI-like
AL539_06235	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_06240	SSF55073	Nucleotide cyclase
AL539_06240	SSF55781	GAF domain-like
AL539_06250	SSF48452	TPR-like
AL539_06250	SSF53300	vWA-like
AL539_06255	SSF53300	vWA-like
AL539_06270	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_06275	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
AL539_06280	SSF116734	DNA methylase specificity domain
AL539_06285	SSF46894	C-terminal effector domain of the bipartite response regulators
AL539_06290	SSF46894	C-terminal effector domain of the bipartite response regulators
AL539_06295	SSF51120	beta-Roll
AL539_06300	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_06300	SSF90123	ABC transporter transmembrane region
AL539_06305	SSF111369	HlyD-like secretion proteins
AL539_06310	SSF50182	Sm-like ribonucleoproteins
AL539_06315	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
AL539_06320	SSF53807	"Helical backbone" metal receptor
AL539_06325	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_06335	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_06335	SSF90123	ABC transporter transmembrane region
AL539_06340	SSF47384	Homodimeric domain of signal transducing histidine kinase
AL539_06340	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
AL539_06345	SSF46894	C-terminal effector domain of the bipartite response regulators
AL539_06345	SSF52172	CheY-like
AL539_06350	SSF116726	TrkA C-terminal domain-like
AL539_06350	SSF51735	NAD(P)-binding Rossmann-fold domains
AL539_06360	SSF46785	"Winged helix" DNA-binding domain
AL539_06360	SSF53850	Periplasmic binding protein-like II
AL539_06370	SSF50022	ISP domain
AL539_06370	SSF55961	Bet v1-like
AL539_06375	SSF53720	ALDH-like
AL539_06380	SSF51905	FAD/NAD(P)-binding domain
AL539_06380	SSF57802	Rubredoxin-like
AL539_06385	SSF51905	FAD/NAD(P)-binding domain
AL539_06390	SSF51182	RmlC-like cupins
AL539_06395	SSF49503	Cupredoxins
AL539_06400	SSF56784	HAD-like
AL539_06410	SSF46689	Homeodomain-like
AL539_06410	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_06410	SSF55781	GAF domain-like
AL539_06415	SSF52218	Flavoproteins
AL539_06415	SSF56281	Metallo-hydrolase/oxidoreductase
AL539_06415	SSF57802	Rubredoxin-like
AL539_06420	SSF51905	FAD/NAD(P)-binding domain
AL539_06425	SSF51197	Clavaminate synthase-like
AL539_06430	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
AL539_06430	SSF51735	NAD(P)-binding Rossmann-fold domains
AL539_06435	SSF56634	Heme-dependent catalase-like
AL539_06440	SSF47616	GST C-terminal domain-like
AL539_06440	SSF52833	Thioredoxin-like
AL539_06445	SSF50129	GroES-like
AL539_06445	SSF51735	NAD(P)-binding Rossmann-fold domains
AL539_06450	SSF46689	Homeodomain-like
AL539_06450	SSF48498	Tetracyclin repressor-like, C-terminal domain
AL539_06455	SSF88697	PUA domain-like
AL539_06470	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
AL539_06475	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_06485	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
AL539_06490	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_06495	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_06500	SSF142984	Nqo1 middle domain-like
AL539_06505	SSF56925	OMPA-like
AL539_06510	SSF51735	NAD(P)-binding Rossmann-fold domains
AL539_06515	SSF50331	MOP-like
AL539_06515	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_06520	SSF53850	Periplasmic binding protein-like II
AL539_06525	SSF160964	MalF N-terminal region-like
AL539_06525	SSF161098	MetI-like
AL539_06530	SSF161098	MetI-like
AL539_06540	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
AL539_06545	SSF103481	Multidrug resistance efflux transporter EmrE
AL539_06550	SSF46689	Homeodomain-like
AL539_06550	SSF51182	RmlC-like cupins
AL539_06555	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_06555	SSF90123	ABC transporter transmembrane region
AL539_06560	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_06560	SSF90123	ABC transporter transmembrane region
AL539_06565	SSF56935	Porins
AL539_06570	SSF53807	"Helical backbone" metal receptor
AL539_06575	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
AL539_06580	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
AL539_06585	SSF53187	Zn-dependent exopeptidases
AL539_06595	SSF51556	Metallo-dependent hydrolases
AL539_06610	SSF141673	MOSC N-terminal domain-like
AL539_06610	SSF50800	PK beta-barrel domain-like
AL539_06610	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
AL539_06610	SSF54292	2Fe-2S ferredoxin-like
AL539_06610	SSF63380	Riboflavin synthase domain-like
AL539_06615	SSF52402	Adenine nucleotide alpha hydrolases-like
AL539_06620	SSF52374	Nucleotidylyl transferase
AL539_06635	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
AL539_06655	SSF46689	Homeodomain-like
AL539_06660	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_06665	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
AL539_06670	SSF53807	"Helical backbone" metal receptor
AL539_06685	SSF74653	TolA/TonB C-terminal domain
AL539_06690	SSF102114	Radical SAM enzymes
AL539_06695	SSF144064	Heme iron utilization protein-like
AL539_06700	SSF50475	FMN-binding split barrel
AL539_06705	SSF89028	Cobalamin adenosyltransferase-like
AL539_06710	SSF50341	CheW-like
AL539_06710	SSF52172	CheY-like
AL539_06715	SSF54534	FKBP-like
AL539_06725	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_06730	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_06735	SSF53850	Periplasmic binding protein-like II
AL539_06740	SSF161098	MetI-like
AL539_06745	SSF100950	NagB/RpiA/CoA transferase-like
AL539_06745	SSF46785	"Winged helix" DNA-binding domain
AL539_06750	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
AL539_06750	SSF51735	NAD(P)-binding Rossmann-fold domains
AL539_06755	SSF142764	YgbK-like
AL539_06760	SSF53639	AraD/HMP-PK domain-like
AL539_06765	SSF51658	Xylose isomerase-like
AL539_06770	SSF51735	NAD(P)-binding Rossmann-fold domains
AL539_06795	SSF103190	Sensory domain-like
AL539_06795	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
AL539_06800	SSF46785	"Winged helix" DNA-binding domain
AL539_06800	SSF53850	Periplasmic binding protein-like II
AL539_06805	SSF52096	ClpP/crotonase
AL539_06825	SSF69118	AhpD-like
AL539_06830	SSF46955	Putative DNA-binding domain
AL539_06835	SSF51445	(Trans)glycosidases
AL539_06840	SSF46785	"Winged helix" DNA-binding domain
AL539_06850	SSF51735	NAD(P)-binding Rossmann-fold domains
AL539_06855	SSF52218	Flavoproteins
AL539_06860	SSF52402	Adenine nucleotide alpha hydrolases-like
AL539_06865	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_06870	SSF50993	Peptidase/esterase 'gauge' domain
AL539_06870	SSF53474	alpha/beta-Hydrolases
AL539_06880	SSF111369	HlyD-like secretion proteins
AL539_06885	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
AL539_06885	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
AL539_06885	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
AL539_06890	SSF56935	Porins
AL539_06900	SSF55729	Acyl-CoA N-acyltransferases (Nat)
AL539_06910	SSF55073	Nucleotide cyclase
AL539_06910	SSF55781	GAF domain-like
AL539_06915	SSF56601	beta-lactamase/transpeptidase-like
AL539_06920	SSF49503	Cupredoxins
AL539_06925	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
AL539_06925	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
AL539_06925	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
AL539_06930	SSF111369	HlyD-like secretion proteins
AL539_06935	SSF56954	Outer membrane efflux proteins (OEP)
AL539_06945	SSF46548	alpha-helical ferredoxin
AL539_06945	SSF50692	ADC-like
AL539_06945	SSF51971	Nucleotide-binding domain
AL539_06945	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
AL539_06945	SSF54292	2Fe-2S ferredoxin-like
AL539_06945	SSF54862	4Fe-4S ferredoxins
AL539_06960	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_06965	SSF111369	HlyD-like secretion proteins
AL539_06970	SSF54506	Diaminopimelate epimerase-like
AL539_06975	SSF49777	PEBP-like
AL539_06980	SSF46689	Homeodomain-like
AL539_06990	SSF46785	"Winged helix" DNA-binding domain
AL539_06995	SSF52218	Flavoproteins
AL539_07000	SSF46785	"Winged helix" DNA-binding domain
AL539_07015	SSF52833	Thioredoxin-like
AL539_07020	SSF53850	Periplasmic binding protein-like II
AL539_07025	SSF46785	"Winged helix" DNA-binding domain
AL539_07025	SSF53850	Periplasmic binding protein-like II
AL539_07030	SSF51430	NAD(P)-linked oxidoreductase
AL539_07035	SSF143744	GlcG-like
AL539_07045	SSF47413	lambda repressor-like DNA-binding domains
AL539_07065	SSF103190	Sensory domain-like
AL539_07065	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
AL539_07085	SSF51316	Mss4-like
AL539_07095	SSF51261	Duplicated hybrid motif
AL539_07100	SSF141868	EAL domain-like
AL539_07100	SSF55073	Nucleotide cyclase
AL539_07100	SSF55781	GAF domain-like
AL539_07105	SSF46785	"Winged helix" DNA-binding domain
AL539_07105	SSF53850	Periplasmic binding protein-like II
AL539_07110	SSF103473	MFS general substrate transporter
AL539_07125	SSF52833	Thioredoxin-like
AL539_07130	SSF103481	Multidrug resistance efflux transporter EmrE
AL539_07135	SSF56935	Porins
AL539_07140	SSF56935	Porins
AL539_07145	SSF56529	FAH
AL539_07160	SSF46689	Homeodomain-like
AL539_07160	SSF51215	Regulatory protein AraC
AL539_07170	SSF55729	Acyl-CoA N-acyltransferases (Nat)
AL539_07175	SSF53738	Phosphoglucomutase, first 3 domains
AL539_07175	SSF55957	Phosphoglucomutase, C-terminal domain
AL539_07180	SSF46626	Cytochrome c
AL539_07180	SSF49503	Cupredoxins
AL539_07180	SSF81464	Cytochrome c oxidase subunit II-like, transmembrane region
AL539_07185	SSF81442	Cytochrome c oxidase subunit I-like
AL539_07190	SSF110111	Ctag/Cox11
AL539_07195	SSF81452	Cytochrome c oxidase subunit III-like
AL539_07225	SSF54534	FKBP-like
AL539_07230	SSF52833	Thioredoxin-like
AL539_07235	SSF103088	OmpA-like
AL539_07240	SSF52833	Thioredoxin-like
AL539_07250	SSF52980	Restriction endonuclease-like
AL539_07255	SSF50249	Nucleic acid-binding proteins
AL539_07265	SSF53850	Periplasmic binding protein-like II
AL539_07265	SSF55073	Nucleotide cyclase
AL539_07270	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
AL539_07270	SSF88946	Sigma2 domain of RNA polymerase sigma factors
AL539_07280	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_07280	SSF90123	ABC transporter transmembrane region
AL539_07285	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_07285	SSF90123	ABC transporter transmembrane region
AL539_07290	SSF56954	Outer membrane efflux proteins (OEP)
AL539_07295	SSF52172	CheY-like
AL539_07320	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
AL539_07325	SSF47240	Ferritin-like
AL539_07330	SSF56784	HAD-like
AL539_07335	SSF50952	Soluble quinoprotein glucose dehydrogenase
AL539_07340	SSF56796	Dehydroquinate synthase-like
AL539_07345	SSF52317	Class I glutamine amidotransferase-like
AL539_07350	SSF103481	Multidrug resistance efflux transporter EmrE
AL539_07355	SSF161111	Cation efflux protein transmembrane domain-like
AL539_07360	SSF46785	"Winged helix" DNA-binding domain
AL539_07360	SSF53850	Periplasmic binding protein-like II
AL539_07365	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
AL539_07370	SSF56801	Acetyl-CoA synthetase-like
AL539_07375	SSF56534	Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
AL539_07380	SSF55248	PCD-like
AL539_07385	SSF75011	3-carboxy-cis,cis-mucoante lactonizing enzyme
AL539_07405	SSF53041	Resolvase-like
AL539_07415	SSF46785	"Winged helix" DNA-binding domain
AL539_07440	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_07455	SSF116734	DNA methylase specificity domain
AL539_07460	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
AL539_07465	SSF56349	DNA breaking-rejoining enzymes
AL539_07500	SSF117782	YbjQ-like
AL539_07590	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
AL539_07600	SSF50249	Nucleic acid-binding proteins
AL539_07610	SSF53182	Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase)
AL539_07620	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_07625	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_07635	SSF52768	Arginase/deacetylase
AL539_07640	SSF46785	"Winged helix" DNA-binding domain
AL539_07640	SSF55781	GAF domain-like
AL539_07645	SSF141868	EAL domain-like
AL539_07650	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_07655	SSF55785	PYP-like sensor domain (PAS domain)
AL539_07655	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
AL539_07665	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
AL539_07670	SSF53850	Periplasmic binding protein-like II
AL539_07680	SSF46689	Homeodomain-like
AL539_07680	SSF51215	Regulatory protein AraC
AL539_07685	SSF50249	Nucleic acid-binding proteins
AL539_07690	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_07705	SSF53067	Actin-like ATPase domain
AL539_07710	SSF46785	"Winged helix" DNA-binding domain
AL539_07710	SSF53850	Periplasmic binding protein-like II
AL539_07715	SSF53474	alpha/beta-Hydrolases
AL539_07720	SSF53474	alpha/beta-Hydrolases
AL539_07730	SSF53474	alpha/beta-Hydrolases
AL539_07740	SSF46689	Homeodomain-like
AL539_07740	SSF51182	RmlC-like cupins
AL539_07750	SSF46785	"Winged helix" DNA-binding domain
AL539_07755	SSF51338	Composite domain of metallo-dependent hydrolases
AL539_07755	SSF51556	Metallo-dependent hydrolases
AL539_07760	SSF51161	Trimeric LpxA-like enzymes
AL539_07765	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_07770	SSF53187	Zn-dependent exopeptidases
AL539_07775	SSF51261	Duplicated hybrid motif
AL539_07785	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_07790	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_07795	SSF109635	DnaK suppressor protein DksA, alpha-hairpin domain
AL539_07795	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
AL539_07820	SSF55785	PYP-like sensor domain (PAS domain)
AL539_07820	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
AL539_07825	SSF103481	Multidrug resistance efflux transporter EmrE
AL539_07830	SSF51569	Aldolase
AL539_07835	SSF52096	ClpP/crotonase
AL539_07840	SSF52096	ClpP/crotonase
AL539_07845	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
AL539_07845	SSF56645	Acyl-CoA dehydrogenase NM domain-like
AL539_07850	SSF46955	Putative DNA-binding domain
AL539_07855	SSF53901	Thiolase-like
AL539_07860	SSF53720	ALDH-like
AL539_07865	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
AL539_07865	SSF56645	Acyl-CoA dehydrogenase NM domain-like
AL539_07870	SSF52096	ClpP/crotonase
AL539_07875	SSF52096	ClpP/crotonase
AL539_07880	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
AL539_07880	SSF51735	NAD(P)-binding Rossmann-fold domains
AL539_07885	SSF51735	NAD(P)-binding Rossmann-fold domains
AL539_07890	SSF49503	Cupredoxins
AL539_07890	SSF81464	Cytochrome c oxidase subunit II-like, transmembrane region
AL539_07895	SSF81442	Cytochrome c oxidase subunit I-like
AL539_07900	SSF81452	Cytochrome c oxidase subunit III-like
AL539_07915	SSF51395	FMN-linked oxidoreductases
AL539_07920	SSF46785	"Winged helix" DNA-binding domain
AL539_07920	SSF53850	Periplasmic binding protein-like II
AL539_07925	SSF55298	YjgF-like
AL539_07930	SSF53720	ALDH-like
AL539_07935	SSF51556	Metallo-dependent hydrolases
AL539_07955	SSF54427	NTF2-like
AL539_07960	SSF53850	Periplasmic binding protein-like II
AL539_07970	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_07975	SSF53850	Periplasmic binding protein-like II
AL539_07980	SSF161098	MetI-like
AL539_07985	SSF161098	MetI-like
AL539_07990	SSF49482	Aromatic compound dioxygenase
AL539_07995	SSF46785	"Winged helix" DNA-binding domain
AL539_07995	SSF53850	Periplasmic binding protein-like II
AL539_08000	SSF47616	GST C-terminal domain-like
AL539_08000	SSF52833	Thioredoxin-like
AL539_08005	SSF52317	Class I glutamine amidotransferase-like
AL539_08010	SSF46785	"Winged helix" DNA-binding domain
AL539_08010	SSF53850	Periplasmic binding protein-like II
AL539_08015	SSF51905	FAD/NAD(P)-binding domain
AL539_08015	SSF54373	FAD-linked reductases, C-terminal domain
AL539_08015	SSF54862	4Fe-4S ferredoxins
AL539_08020	SSF52402	Adenine nucleotide alpha hydrolases-like
AL539_08020	SSF52467	DHS-like NAD/FAD-binding domain
AL539_08025	SSF47005	Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
AL539_08025	SSF51230	Single hybrid motif
AL539_08025	SSF52777	CoA-dependent acyltransferases
AL539_08030	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
AL539_08030	SSF52922	TK C-terminal domain-like
AL539_08035	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
AL539_08040	SSF143410	DOPA-like
AL539_08050	SSF53067	Actin-like ATPase domain
AL539_08055	SSF110087	DR1885-like metal-binding protein
AL539_08090	SSF52172	CheY-like
AL539_08095	SSF47384	Homodimeric domain of signal transducing histidine kinase
AL539_08095	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
AL539_08100	SSF55136	Probable bacterial effector-binding domain
AL539_08100	SSF55961	Bet v1-like
AL539_08110	SSF49785	Galactose-binding domain-like
AL539_08110	SSF52743	Subtilisin-like
AL539_08120	SSF48452	TPR-like
AL539_08120	SSF55073	Nucleotide cyclase
AL539_08135	SSF55729	Acyl-CoA N-acyltransferases (Nat)
AL539_08140	SSF50692	ADC-like
AL539_08140	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
AL539_08145	SSF53790	Tetrapyrrole methylase
AL539_08150	SSF47648	Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
AL539_08150	SSF52418	Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
AL539_08155	SSF53474	alpha/beta-Hydrolases
AL539_08160	SSF52172	CheY-like
AL539_08170	SSF53850	Periplasmic binding protein-like II
AL539_08185	SSF161098	MetI-like
AL539_08190	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_08195	SSF51905	FAD/NAD(P)-binding domain
AL539_08195	SSF55124	Nitrite/Sulfite reductase N-terminal domain-like
AL539_08195	SSF56014	Nitrite and sulphite reductase 4Fe-4S domain-like
AL539_08200	SSF50022	ISP domain
AL539_08205	SSF117856	AF0104/ALDC/Ptd012-like
AL539_08210	SSF46689	Homeodomain-like
AL539_08210	SSF48498	Tetracyclin repressor-like, C-terminal domain
AL539_08215	SSF47616	GST C-terminal domain-like
AL539_08215	SSF52833	Thioredoxin-like
AL539_08225	SSF52172	CheY-like
AL539_08225	SSF81606	PP2C-like
AL539_08230	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
AL539_08240	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
AL539_08245	SSF56112	Protein kinase-like (PK-like)
AL539_08250	SSF49879	SMAD/FHA domain
AL539_08265	SSF141868	EAL domain-like
AL539_08275	SSF51306	LexA/Signal peptidase
AL539_08300	SSF52833	Thioredoxin-like
AL539_08300	SSF54423	DsbC/DsbG N-terminal domain-like
AL539_08360	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_08365	SSF109604	HD-domain/PDEase-like
AL539_08385	SSF56712	Prokaryotic type I DNA topoisomerase
AL539_08385	SSF57783	Zinc beta-ribbon
AL539_08475	SSF100950	NagB/RpiA/CoA transferase-like
AL539_08475	SSF46548	alpha-helical ferredoxin
AL539_08480	SSF100950	NagB/RpiA/CoA transferase-like
AL539_08485	SSF46785	"Winged helix" DNA-binding domain
AL539_08485	SSF53850	Periplasmic binding protein-like II
AL539_08490	SSF55785	PYP-like sensor domain (PAS domain)
AL539_08500	SSF46689	Homeodomain-like
AL539_08500	SSF53098	Ribonuclease H-like
AL539_08550	SSF109709	KorB DNA-binding domain-like
AL539_08550	SSF110849	ParB/Sulfiredoxin
AL539_08555	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_08565	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_08575	SSF116734	DNA methylase specificity domain
AL539_08580	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
AL539_08595	SSF56349	DNA breaking-rejoining enzymes
AL539_08605	SSF81901	HCP-like
AL539_08630	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_08690	SSF50969	YVTN repeat-like/Quinoprotein amine dehydrogenase
AL539_08695	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_08705	SSF46785	"Winged helix" DNA-binding domain
AL539_08710	SSF46689	Homeodomain-like
AL539_08750	SSF50199	Staphylococcal nuclease
AL539_08765	SSF52833	Thioredoxin-like
AL539_08770	SSF52096	ClpP/crotonase
AL539_08830	SSF53067	Actin-like ATPase domain
AL539_08840	SSF160930	FlhC-like
AL539_08845	SSF63592	Flagellar transcriptional activator FlhD
AL539_08850	SSF53955	Lysozyme-like
AL539_08855	SSF47413	lambda repressor-like DNA-binding domains
AL539_08875	SSF52833	Thioredoxin-like
AL539_08880	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_08890	SSF141072	CalX-like
AL539_08910	SSF56596	Replication terminator protein (Tus)
AL539_08920	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_08950	SSF56349	DNA breaking-rejoining enzymes
AL539_08960	SSF56349	DNA breaking-rejoining enzymes
AL539_08975	SSF51621	Phosphoenolpyruvate/pyruvate domain
AL539_08985	SSF46689	Homeodomain-like
AL539_08990	SSF51306	LexA/Signal peptidase
AL539_08995	SSF56349	DNA breaking-rejoining enzymes
AL539_09010	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
AL539_09015	SSF116734	DNA methylase specificity domain
AL539_09020	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_09025	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_09035	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_09060	SSF50249	Nucleic acid-binding proteins
AL539_09070	SSF52980	Restriction endonuclease-like
AL539_09075	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_09095	SSF53300	vWA-like
AL539_09100	SSF102712	JAB1/MPN domain
AL539_09110	SSF57783	Zinc beta-ribbon
AL539_09120	SSF51161	Trimeric LpxA-like enzymes
AL539_09120	SSF53448	Nucleotide-diphospho-sugar transferases
AL539_09140	SSF53041	Resolvase-like
AL539_09150	SSF47413	lambda repressor-like DNA-binding domains
AL539_09180	SSF90257	Myosin rod fragments
AL539_09195	SSF56349	DNA breaking-rejoining enzymes
AL539_09200	SSF52799	(Phosphotyrosine protein) phosphatases II
AL539_09220	SSF47413	lambda repressor-like DNA-binding domains
AL539_09245	SSF57783	Zinc beta-ribbon
AL539_09275	SSF109604	HD-domain/PDEase-like
AL539_09335	SSF64307	SirA-like
AL539_09370	SSF54292	2Fe-2S ferredoxin-like
AL539_09375	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
AL539_09405	SSF53300	vWA-like
AL539_09415	SSF52980	Restriction endonuclease-like
AL539_09430	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_09480	SSF103190	Sensory domain-like
AL539_09515	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
AL539_09520	SSF111369	HlyD-like secretion proteins
AL539_09525	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
AL539_09525	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
AL539_09525	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
AL539_09530	SSF46785	"Winged helix" DNA-binding domain
AL539_09540	SSF52374	Nucleotidylyl transferase
AL539_09550	SSF56219	DNase I-like
AL539_09560	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
AL539_09570	SSF47240	Ferritin-like
AL539_09575	SSF141571	Pentapeptide repeat-like
AL539_09640	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
AL539_09660	SSF46689	Homeodomain-like
AL539_09675	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_09680	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
AL539_09690	SSF53041	Resolvase-like
AL539_09705	SSF46785	"Winged helix" DNA-binding domain
AL539_09705	SSF53850	Periplasmic binding protein-like II
AL539_09710	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
AL539_09715	SSF51735	NAD(P)-binding Rossmann-fold domains
AL539_09715	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
AL539_09720	SSF46785	"Winged helix" DNA-binding domain
AL539_09720	SSF54909	Dimeric alpha+beta barrel
AL539_09725	SSF46785	"Winged helix" DNA-binding domain
AL539_09725	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_09730	SSF89392	Prokaryotic lipoproteins and lipoprotein localization factors
AL539_09735	SSF48019	post-AAA+ oligomerization domain-like
AL539_09735	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_09740	SSF46589	tRNA-binding arm
AL539_09740	SSF55681	Class II aaRS and biotin synthetases
AL539_09755	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
AL539_09760	SSF53383	PLP-dependent transferases
AL539_09765	SSF102114	Radical SAM enzymes
AL539_09770	SSF53383	PLP-dependent transferases
AL539_09775	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
AL539_09780	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_09795	SSF54427	NTF2-like
AL539_09800	SSF51735	NAD(P)-binding Rossmann-fold domains
AL539_09805	SSF51905	FAD/NAD(P)-binding domain
AL539_09815	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
AL539_09835	SSF48557	L-aspartase-like
AL539_09840	SSF101322	YcfC-like
AL539_09845	SSF52402	Adenine nucleotide alpha hydrolases-like
AL539_09855	SSF53613	Ribokinase-like
AL539_09860	SSF81273	H-NS histone-like proteins
AL539_09870	SSF53850	Periplasmic binding protein-like II
AL539_09870	SSF54913	GlnB-like
AL539_09875	SSF53720	ALDH-like
AL539_09880	SSF53383	PLP-dependent transferases
AL539_09885	SSF54211	Ribosomal protein S5 domain 2-like
AL539_09885	SSF56784	HAD-like
AL539_09890	SSF52317	Class I glutamine amidotransferase-like
AL539_09895	SSF51366	Ribulose-phoshate binding barrel
AL539_09900	SSF51366	Ribulose-phoshate binding barrel
AL539_09905	SSF101386	all-alpha NTP pyrophosphatases
AL539_09905	SSF141734	HisI-like
AL539_09910	SSF103642	Sec-C motif
AL539_09910	SSF54427	NTF2-like
AL539_09915	SSF109604	HD-domain/PDEase-like
AL539_09915	SSF141868	EAL domain-like
AL539_09920	SSF56300	Metallo-dependent phosphatases
AL539_09925	SSF50891	Cyclophilin-like
AL539_09930	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
AL539_09930	SSF52374	Nucleotidylyl transferase
AL539_09935	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_09935	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
AL539_09945	SSF51735	NAD(P)-binding Rossmann-fold domains
AL539_09950	SSF46785	"Winged helix" DNA-binding domain
AL539_09950	SSF53850	Periplasmic binding protein-like II
AL539_09985	SSF48695	Multiheme cytochromes
AL539_09990	SSF50692	ADC-like
AL539_09990	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
AL539_09995	SSF51445	(Trans)glycosidases
AL539_10005	SSF64182	DHH phosphoesterases
AL539_10015	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_10020	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_10025	SSF161098	MetI-like
AL539_10030	SSF161098	MetI-like
AL539_10035	SSF53850	Periplasmic binding protein-like II
AL539_10040	SSF46689	Homeodomain-like
AL539_10040	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_10060	SSF111369	HlyD-like secretion proteins
AL539_10065	SSF111369	HlyD-like secretion proteins
AL539_10070	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
AL539_10070	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
AL539_10070	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
AL539_10075	SSF48150	DNA-glycosylase
AL539_10080	SSF158855	Lipase chaperone-like
AL539_10085	SSF53474	alpha/beta-Hydrolases
AL539_10090	SSF53383	PLP-dependent transferases
AL539_10095	SSF56024	Phospholipase D/nuclease
AL539_10100	SSF161070	SNF-like
AL539_10105	SSF55120	Pseudouridine synthase
AL539_10110	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
AL539_10115	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
AL539_10115	SSF54292	2Fe-2S ferredoxin-like
AL539_10115	SSF63380	Riboflavin synthase domain-like
AL539_10120	SSF56821	Prismane protein-like
AL539_10125	SSF46689	Homeodomain-like
AL539_10125	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_10125	SSF55781	GAF domain-like
AL539_10145	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_10150	SSF161098	MetI-like
AL539_10155	SSF53850	Periplasmic binding protein-like II
AL539_10180	SSF55816	5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain
AL539_10180	SSF56300	Metallo-dependent phosphatases
AL539_10185	SSF55729	Acyl-CoA N-acyltransferases (Nat)
AL539_10190	SSF50715	Ribosomal protein L25-like
AL539_10195	SSF47384	Homodimeric domain of signal transducing histidine kinase
AL539_10195	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
AL539_10200	SSF46894	C-terminal effector domain of the bipartite response regulators
AL539_10200	SSF52172	CheY-like
AL539_10210	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_10210	SSF57829	Zn-binding ribosomal proteins
AL539_10215	SSF55120	Pseudouridine synthase
AL539_10215	SSF55174	Alpha-L RNA-binding motif
AL539_10225	SSF103473	MFS general substrate transporter
AL539_10235	SSF51735	NAD(P)-binding Rossmann-fold domains
AL539_10245	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_10255	SSF159245	AttH-like
AL539_10265	SSF46689	Homeodomain-like
AL539_10265	SSF48498	Tetracyclin repressor-like, C-terminal domain
AL539_10270	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
AL539_10270	SSF56645	Acyl-CoA dehydrogenase NM domain-like
AL539_10280	SSF116726	TrkA C-terminal domain-like
AL539_10285	SSF52833	Thioredoxin-like
AL539_10290	SSF56796	Dehydroquinate synthase-like
AL539_10295	SSF46689	Homeodomain-like
AL539_10295	SSF53697	SIS domain
AL539_10300	SSF53383	PLP-dependent transferases
AL539_10315	SSF109604	HD-domain/PDEase-like
AL539_10330	SSF159894	YgaC/TfoX-N like
AL539_10340	SSF52172	CheY-like
AL539_10345	SSF47384	Homodimeric domain of signal transducing histidine kinase
AL539_10345	SSF51206	cAMP-binding domain-like
AL539_10345	SSF52172	CheY-like
AL539_10345	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
AL539_10355	SSF53383	PLP-dependent transferases
AL539_10360	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
AL539_10365	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_10365	SSF90123	ABC transporter transmembrane region
AL539_10370	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_10370	SSF90123	ABC transporter transmembrane region
AL539_10375	SSF51905	FAD/NAD(P)-binding domain
AL539_10385	SSF53383	PLP-dependent transferases
AL539_10395	SSF49785	Galactose-binding domain-like
AL539_10395	SSF55073	Nucleotide cyclase
AL539_10410	SSF51735	NAD(P)-binding Rossmann-fold domains
AL539_10410	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
AL539_10415	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_10425	SSF56300	Metallo-dependent phosphatases
AL539_10430	SSF56104	SAICAR synthase-like
AL539_10435	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_10445	SSF46565	Chaperone J-domain
AL539_10445	SSF81901	HCP-like
AL539_10450	SSF103088	OmpA-like
AL539_10460	SSF103039	CheC-like
AL539_10465	SSF46548	alpha-helical ferredoxin
AL539_10465	SSF55103	FAD-linked oxidases, C-terminal domain
AL539_10465	SSF56176	FAD-binding/transporter-associated domain-like
AL539_10480	SSF48557	L-aspartase-like
AL539_10485	SSF111326	Urocanase
AL539_10490	SSF52768	Arginase/deacetylase
AL539_10495	SSF51338	Composite domain of metallo-dependent hydrolases
AL539_10495	SSF51556	Metallo-dependent hydrolases
AL539_10500	SSF46785	"Winged helix" DNA-binding domain
AL539_10500	SSF64288	Chorismate lyase-like
AL539_10515	SSF52954	Class II aaRS ABD-related
AL539_10515	SSF55186	ThrRS/AlaRS common domain
AL539_10515	SSF55681	Class II aaRS and biotin synthetases
AL539_10515	SSF81271	TGS-like
AL539_10520	SSF54364	Translation initiation factor IF3, N-terminal domain
AL539_10520	SSF55200	Translation initiation factor IF3, C-terminal domain
AL539_10525	SSF143034	L35p-like
AL539_10530	SSF74731	Ribosomal protein L20
AL539_10535	SSF117782	YbjQ-like
AL539_10540	SSF47413	lambda repressor-like DNA-binding domains
AL539_10550	SSF46689	Homeodomain-like
AL539_10555	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
AL539_10560	SSF89392	Prokaryotic lipoproteins and lipoprotein localization factors
AL539_10570	SSF46589	tRNA-binding arm
AL539_10570	SSF55681	Class II aaRS and biotin synthetases
AL539_10575	SSF46955	Putative DNA-binding domain
AL539_10575	SSF50249	Nucleic acid-binding proteins
AL539_10575	SSF54991	Anticodon-binding domain of PheRS
AL539_10575	SSF55681	Class II aaRS and biotin synthetases
AL539_10575	SSF56037	PheT/TilS domain
AL539_10585	SSF47729	IHF-like DNA-binding proteins
AL539_10590	SSF81301	Nucleotidyltransferase
AL539_10595	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
AL539_10600	SSF51246	Rudiment single hybrid motif
AL539_10600	SSF52440	PreATP-grasp domain
AL539_10600	SSF56059	Glutathione synthetase ATP-binding domain-like
AL539_10605	SSF53927	Cytidine deaminase-like
AL539_10620	SSF53098	Ribonuclease H-like
AL539_10625	SSF118215	Proton glutamate symport protein
AL539_10630	SSF51735	NAD(P)-binding Rossmann-fold domains
AL539_10635	SSF52733	Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT)
AL539_10645	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_10650	SSF53254	Phosphoglycerate mutase-like
AL539_10655	SSF55486	Metalloproteases ("zincins"), catalytic domain
AL539_10660	SSF53187	Zn-dependent exopeptidases
AL539_10665	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
AL539_10670	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_10685	SSF103473	MFS general substrate transporter
AL539_10690	SSF46785	"Winged helix" DNA-binding domain
AL539_10690	SSF53850	Periplasmic binding protein-like II
AL539_10695	SSF52833	Thioredoxin-like
AL539_10705	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
AL539_10715	SSF50156	PDZ domain-like
AL539_10715	SSF52096	ClpP/crotonase
AL539_10725	SSF46785	"Winged helix" DNA-binding domain
AL539_10725	SSF48008	GntR ligand-binding domain-like
AL539_10730	SSF53720	ALDH-like
AL539_10735	SSF54506	Diaminopimelate epimerase-like
AL539_10740	SSF51905	FAD/NAD(P)-binding domain
AL539_10740	SSF54373	FAD-linked reductases, C-terminal domain
AL539_10745	SSF53850	Periplasmic binding protein-like II
AL539_10750	SSF51735	NAD(P)-binding Rossmann-fold domains
AL539_10755	SSF51569	Aldolase
AL539_10760	SSF50331	MOP-like
AL539_10760	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_10765	SSF161098	MetI-like
AL539_10770	SSF161098	MetI-like
AL539_10780	SSF49299	PKD domain
AL539_10785	SSF53092	Creatinase/prolidase N-terminal domain
AL539_10785	SSF55920	Creatinase/aminopeptidase
AL539_10790	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_10795	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_10800	SSF161098	MetI-like
AL539_10805	SSF161098	MetI-like
AL539_10810	SSF53850	Periplasmic binding protein-like II
AL539_10815	SSF53187	Zn-dependent exopeptidases
AL539_10815	SSF55031	Bacterial exopeptidase dimerisation domain
AL539_10820	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
AL539_10825	SSF51182	RmlC-like cupins
AL539_10830	SSF56529	FAH
AL539_10835	SSF47616	GST C-terminal domain-like
AL539_10835	SSF52833	Thioredoxin-like
AL539_10980	SSF159888	YdhG-like
AL539_10995	SSF56281	Metallo-hydrolase/oxidoreductase
AL539_11005	SSF54368	Glutamine synthetase, N-terminal domain
AL539_11005	SSF55931	Glutamine synthetase/guanido kinase
AL539_11015	SSF52317	Class I glutamine amidotransferase-like
AL539_11020	SSF47413	lambda repressor-like DNA-binding domains
AL539_11020	SSF51182	RmlC-like cupins
AL539_11025	SSF53720	ALDH-like
AL539_11030	SSF51905	FAD/NAD(P)-binding domain
AL539_11035	SSF56317	Carbon-nitrogen hydrolase
AL539_11040	SSF55909	Pentein
AL539_11045	SSF53720	ALDH-like
AL539_11050	SSF53383	PLP-dependent transferases
AL539_11055	SSF141868	EAL domain-like
AL539_11060	SSF103481	Multidrug resistance efflux transporter EmrE
AL539_11065	SSF46785	"Winged helix" DNA-binding domain
AL539_11070	SSF142906	YjbR-like
AL539_11085	SSF56935	Porins
AL539_11090	SSF53850	Periplasmic binding protein-like II
AL539_11095	SSF47384	Homodimeric domain of signal transducing histidine kinase
AL539_11095	SSF52172	CheY-like
AL539_11095	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
AL539_11100	SSF141868	EAL domain-like
AL539_11100	SSF55073	Nucleotide cyclase
AL539_11105	SSF53850	Periplasmic binding protein-like II
AL539_11110	SSF81901	HCP-like
AL539_11115	SSF52317	Class I glutamine amidotransferase-like
AL539_11125	SSF103481	Multidrug resistance efflux transporter EmrE
AL539_11135	SSF55486	Metalloproteases ("zincins"), catalytic domain
AL539_11170	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
AL539_11175	SSF53649	Alkaline phosphatase-like
AL539_11180	SSF53850	Periplasmic binding protein-like II
AL539_11185	SSF161098	MetI-like
AL539_11190	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_11190	SSF54631	CBS-domain pair
AL539_11195	SSF51206	cAMP-binding domain-like
AL539_11195	SSF54631	CBS-domain pair
AL539_11200	SSF53098	Ribonuclease H-like
AL539_11210	SSF55729	Acyl-CoA N-acyltransferases (Nat)
AL539_11215	SSF53383	PLP-dependent transferases
AL539_11220	SSF51182	RmlC-like cupins
AL539_11225	SSF53633	Carbamate kinase-like
AL539_11225	SSF55021	ACT-like
AL539_11230	SSF53649	Alkaline phosphatase-like
AL539_11235	SSF48452	TPR-like
AL539_11235	SSF48695	Multiheme cytochromes
AL539_11240	SSF56436	C-type lectin-like
AL539_11245	SSF102114	Radical SAM enzymes
AL539_11250	SSF48371	ARM repeat
AL539_11250	SSF48452	TPR-like
AL539_11255	SSF56784	HAD-like
AL539_11260	SSF53649	Alkaline phosphatase-like
AL539_11265	SSF53649	Alkaline phosphatase-like
AL539_11270	SSF51120	beta-Roll
AL539_11285	SSF56954	Outer membrane efflux proteins (OEP)
AL539_11290	SSF103088	OmpA-like
AL539_11295	SSF53850	Periplasmic binding protein-like II
AL539_11300	SSF100950	NagB/RpiA/CoA transferase-like
AL539_11300	SSF46785	"Winged helix" DNA-binding domain
AL539_11305	SSF51735	NAD(P)-binding Rossmann-fold domains
AL539_11310	SSF143744	GlcG-like
AL539_11315	SSF103190	Sensory domain-like
AL539_11315	SSF55073	Nucleotide cyclase
AL539_11330	SSF55729	Acyl-CoA N-acyltransferases (Nat)
AL539_11340	SSF51206	cAMP-binding domain-like
AL539_11340	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
AL539_11345	SSF52172	CheY-like
AL539_11350	SSF141868	EAL domain-like
AL539_11350	SSF55073	Nucleotide cyclase
AL539_11350	SSF55785	PYP-like sensor domain (PAS domain)
AL539_11355	SSF109604	HD-domain/PDEase-like
AL539_11365	SSF51998	PFL-like glycyl radical enzymes
AL539_11370	SSF102114	Radical SAM enzymes
AL539_11370	SSF54862	4Fe-4S ferredoxins
AL539_11375	SSF46785	"Winged helix" DNA-binding domain
AL539_11375	SSF53850	Periplasmic binding protein-like II
AL539_11390	SSF109604	HD-domain/PDEase-like
AL539_11395	SSF56796	Dehydroquinate synthase-like
AL539_11405	SSF109604	HD-domain/PDEase-like
AL539_11405	SSF55781	GAF domain-like
AL539_11415	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_11420	SSF53807	"Helical backbone" metal receptor
AL539_11425	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
AL539_11430	SSF56935	Porins
AL539_11440	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_11440	SSF90123	ABC transporter transmembrane region
AL539_11445	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_11445	SSF90123	ABC transporter transmembrane region
AL539_11450	SSF54523	Pili subunits
AL539_11460	SSF46785	"Winged helix" DNA-binding domain
AL539_11460	SSF53850	Periplasmic binding protein-like II
AL539_11465	SSF54909	Dimeric alpha+beta barrel
AL539_11470	SSF51735	NAD(P)-binding Rossmann-fold domains
AL539_11470	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
AL539_11475	SSF48150	DNA-glycosylase
AL539_11485	SSF53067	Actin-like ATPase domain
AL539_11490	SSF53067	Actin-like ATPase domain
AL539_11500	SSF55073	Nucleotide cyclase
AL539_11505	SSF53098	Ribonuclease H-like
AL539_11510	SSF158682	TerB-like
AL539_11515	SSF56300	Metallo-dependent phosphatases
AL539_11535	SSF52218	Flavoproteins
AL539_11540	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_11545	SSF56925	OMPA-like
AL539_11550	SSF56925	OMPA-like
AL539_11560	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_11570	SSF53448	Nucleotide-diphospho-sugar transferases
AL539_11575	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
AL539_11585	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
AL539_11600	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
AL539_11605	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
AL539_11610	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
AL539_11615	SSF46689	Homeodomain-like
AL539_11615	SSF52172	CheY-like
AL539_11615	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_11620	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
AL539_11625	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_11635	SSF103088	OmpA-like
AL539_11640	SSF52091	SpoIIaa-like
AL539_11645	SSF50249	Nucleic acid-binding proteins
AL539_11645	SSF56091	DNA ligase/mRNA capping enzyme, catalytic domain
AL539_11660	SSF63380	Riboflavin synthase domain-like
AL539_11670	SSF56112	Protein kinase-like (PK-like)
AL539_11675	SSF103039	CheC-like
AL539_11675	SSF52172	CheY-like
AL539_11680	SSF55073	Nucleotide cyclase
AL539_11680	SSF55785	PYP-like sensor domain (PAS domain)
AL539_11690	SSF54001	Cysteine proteinases
AL539_11695	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
AL539_11700	SSF55811	Nudix
AL539_11705	SSF55811	Nudix
AL539_11730	SSF53067	Actin-like ATPase domain
AL539_11740	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_11740	SSF53218	Molybdenum cofactor biosynthesis proteins
AL539_11740	SSF63867	MoeA C-terminal domain-like
AL539_11740	SSF63882	MoeA N-terminal region -like
AL539_11745	SSF53448	Nucleotide-diphospho-sugar transferases
AL539_11750	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_11755	SSF161098	MetI-like
AL539_11760	SSF53850	Periplasmic binding protein-like II
AL539_11765	SSF46689	Homeodomain-like
AL539_11765	SSF52172	CheY-like
AL539_11765	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_11770	SSF103190	Sensory domain-like
AL539_11770	SSF47384	Homodimeric domain of signal transducing histidine kinase
AL539_11770	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
AL539_11780	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_11785	SSF53927	Cytidine deaminase-like
AL539_11800	SSF54862	4Fe-4S ferredoxins
AL539_11805	SSF89155	TorD-like
AL539_11815	SSF50692	ADC-like
AL539_11815	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
AL539_11820	SSF54862	4Fe-4S ferredoxins
AL539_11825	SSF81342	Transmembrane di-heme cytochromes
AL539_11915	SSF160631	SMI1/KNR4-like
AL539_11950	SSF48403	Ankyrin repeat
AL539_11955	SSF111352	Ammonium transporter
AL539_11960	SSF52467	DHS-like NAD/FAD-binding domain
AL539_11965	SSF53850	Periplasmic binding protein-like II
AL539_11970	SSF53850	Periplasmic binding protein-like II
AL539_11975	SSF161098	MetI-like
AL539_11980	SSF161098	MetI-like
AL539_11985	SSF50331	MOP-like
AL539_11985	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_12005	SSF52402	Adenine nucleotide alpha hydrolases-like
AL539_12010	SSF52402	Adenine nucleotide alpha hydrolases-like
AL539_12015	SSF46785	"Winged helix" DNA-binding domain
AL539_12015	SSF51206	cAMP-binding domain-like
AL539_12030	SSF55008	HMA, heavy metal-associated domain
AL539_12030	SSF56784	HAD-like
AL539_12030	SSF81653	Calcium ATPase, transduction domain A
AL539_12030	SSF81665	Calcium ATPase, transmembrane domain M
AL539_12040	SSF46626	Cytochrome c
AL539_12050	SSF46626	Cytochrome c
AL539_12055	SSF81442	Cytochrome c oxidase subunit I-like
AL539_12070	SSF47384	Homodimeric domain of signal transducing histidine kinase
AL539_12070	SSF52172	CheY-like
AL539_12070	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
AL539_12105	SSF54211	Ribosomal protein S5 domain 2-like
AL539_12110	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
AL539_12125	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_12130	SSF52833	Thioredoxin-like
AL539_12135	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
AL539_12145	SSF51395	FMN-linked oxidoreductases
AL539_12150	SSF51735	NAD(P)-binding Rossmann-fold domains
AL539_12150	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
AL539_12160	SSF55486	Metalloproteases ("zincins"), catalytic domain
AL539_12160	SSF63737	Leukotriene A4 hydrolase N-terminal domain
AL539_12170	SSF50156	PDZ domain-like
AL539_12170	SSF52096	ClpP/crotonase
AL539_12175	SSF48657	FinO-like
AL539_12180	SSF55781	GAF domain-like
AL539_12185	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_12185	SSF90123	ABC transporter transmembrane region
AL539_12200	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
AL539_12215	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
AL539_12220	SSF51569	Aldolase
AL539_12225	SSF89963	YajQ-like
AL539_12230	SSF51735	NAD(P)-binding Rossmann-fold domains
AL539_12230	SSF75615	Siroheme synthase middle domains-like
AL539_12240	SSF53850	Periplasmic binding protein-like II
AL539_12245	SSF161098	MetI-like
AL539_12250	SSF161098	MetI-like
AL539_12255	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_12270	SSF69721	DsrC, the gamma subunit of dissimilatory sulfite reductase
AL539_12275	SSF54975	Acylphosphatase/BLUF domain-like
AL539_12280	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
AL539_12285	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
AL539_12285	SSF88697	PUA domain-like
AL539_12295	SSF56954	Outer membrane efflux proteins (OEP)
AL539_12300	SSF103088	OmpA-like
AL539_12300	SSF103647	TSP type-3 repeat
AL539_12325	SSF56954	Outer membrane efflux proteins (OEP)
AL539_12330	SSF103088	OmpA-like
AL539_12340	SSF48452	TPR-like
AL539_12340	SSF55073	Nucleotide cyclase
AL539_12345	SSF46785	"Winged helix" DNA-binding domain
AL539_12345	SSF55781	GAF domain-like
AL539_12350	SSF51735	NAD(P)-binding Rossmann-fold domains
AL539_12355	SSF51430	NAD(P)-linked oxidoreductase
AL539_12360	SSF46785	"Winged helix" DNA-binding domain
AL539_12360	SSF53850	Periplasmic binding protein-like II
AL539_12365	SSF51679	Bacterial luciferase-like
AL539_12370	SSF46785	"Winged helix" DNA-binding domain
AL539_12370	SSF53850	Periplasmic binding protein-like II
AL539_12375	SSF103473	MFS general substrate transporter
AL539_12380	SSF46689	Homeodomain-like
AL539_12385	SSF50129	GroES-like
AL539_12385	SSF51735	NAD(P)-binding Rossmann-fold domains
AL539_12390	SSF46689	Homeodomain-like
AL539_12390	SSF52317	Class I glutamine amidotransferase-like
AL539_12395	SSF52499	Isochorismatase-like hydrolases
AL539_12400	SSF53850	Periplasmic binding protein-like II
AL539_12405	SSF103473	MFS general substrate transporter
AL539_12410	SSF50129	GroES-like
AL539_12410	SSF51735	NAD(P)-binding Rossmann-fold domains
AL539_12415	SSF82282	Homocysteine S-methyltransferase
AL539_12420	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_12425	SSF161098	MetI-like
AL539_12430	SSF53850	Periplasmic binding protein-like II
AL539_12440	SSF56935	Porins
AL539_12445	SSF46785	"Winged helix" DNA-binding domain
AL539_12445	SSF53850	Periplasmic binding protein-like II
AL539_12450	SSF111369	HlyD-like secretion proteins
AL539_12455	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
AL539_12455	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
AL539_12455	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
AL539_12460	SSF46785	"Winged helix" DNA-binding domain
AL539_12460	SSF53850	Periplasmic binding protein-like II
AL539_12470	SSF46785	"Winged helix" DNA-binding domain
AL539_12470	SSF53850	Periplasmic binding protein-like II
AL539_12480	SSF47413	lambda repressor-like DNA-binding domains
AL539_12485	SSF52402	Adenine nucleotide alpha hydrolases-like
AL539_12490	SSF102114	Radical SAM enzymes
AL539_12495	SSF56784	HAD-like
AL539_12500	SSF48317	Acid phosphatase/Vanadium-dependent haloperoxidase
AL539_12500	SSF55811	Nudix
AL539_12505	SSF50494	Trypsin-like serine proteases
AL539_12505	SSF51055	Carbohydrate binding domain
AL539_12510	SSF55729	Acyl-CoA N-acyltransferases (Nat)
AL539_12515	SSF56801	Acetyl-CoA synthetase-like
AL539_12520	SSF54506	Diaminopimelate epimerase-like
AL539_12525	SSF52016	LeuD/IlvD-like
AL539_12525	SSF53732	Aconitase iron-sulfur domain
AL539_12530	SSF48256	Citrate synthase
AL539_12535	SSF51621	Phosphoenolpyruvate/pyruvate domain
AL539_12540	SSF46785	"Winged helix" DNA-binding domain
AL539_12540	SSF48008	GntR ligand-binding domain-like
AL539_12545	SSF51316	Mss4-like
AL539_12550	SSF53850	Periplasmic binding protein-like II
AL539_12565	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_12575	SSF53850	Periplasmic binding protein-like II
AL539_12595	SSF48452	TPR-like
AL539_12600	SSF103388	Virulence-associated V antigen
AL539_12620	SSF48452	TPR-like
AL539_12630	SSF69635	Type III secretory system chaperone-like
AL539_12635	SSF140591	Type III secretion system domain
AL539_12640	SSF140591	Type III secretion system domain
AL539_12645	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_12660	SSF101801	Surface presentation of antigens (SPOA)
AL539_12680	SSF160544	EscU C-terminal domain-like
AL539_12685	SSF46689	Homeodomain-like
AL539_12685	SSF51182	RmlC-like cupins
AL539_12690	SSF103481	Multidrug resistance efflux transporter EmrE
AL539_12700	SSF69635	Type III secretory system chaperone-like
AL539_12710	SSF69635	Type III secretory system chaperone-like
AL539_12715	SSF140931	Fic-like
AL539_12720	SSF69635	Type III secretory system chaperone-like
AL539_12725	SSF160527	V-type ATPase subunit E-like
AL539_12745	SSF140591	Type III secretion system domain
AL539_12755	SSF140129	MxiH-like
AL539_12775	SSF69635	Type III secretory system chaperone-like
AL539_12785	SSF46689	Homeodomain-like
AL539_12795	SSF69635	Type III secretory system chaperone-like
AL539_12805	SSF53720	ALDH-like
AL539_12810	SSF46689	Homeodomain-like
AL539_12810	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_12825	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
AL539_12825	SSF51735	NAD(P)-binding Rossmann-fold domains
AL539_12830	SSF100950	NagB/RpiA/CoA transferase-like
AL539_12835	SSF51735	NAD(P)-binding Rossmann-fold domains
AL539_12835	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
AL539_12840	SSF46689	Homeodomain-like
AL539_12840	SSF55136	Probable bacterial effector-binding domain
AL539_12845	SSF56935	Porins
AL539_12850	SSF52172	CheY-like
AL539_12855	SSF103190	Sensory domain-like
AL539_12855	SSF55785	PYP-like sensor domain (PAS domain)
AL539_12855	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
AL539_12855	SSF55890	Sporulation response regulatory protein Spo0B
AL539_12865	SSF56954	Outer membrane efflux proteins (OEP)
AL539_12870	SSF111369	HlyD-like secretion proteins
AL539_12885	SSF46785	"Winged helix" DNA-binding domain
AL539_12885	SSF53850	Periplasmic binding protein-like II
AL539_12895	SSF52151	FabD/lysophospholipase-like
AL539_12900	SSF53613	Ribokinase-like
AL539_12905	SSF53383	PLP-dependent transferases
AL539_12910	SSF116726	TrkA C-terminal domain-like
AL539_12920	SSF111369	HlyD-like secretion proteins
AL539_12940	SSF56024	Phospholipase D/nuclease
AL539_12965	SSF54909	Dimeric alpha+beta barrel
AL539_12970	SSF51735	NAD(P)-binding Rossmann-fold domains
AL539_12975	SSF54909	Dimeric alpha+beta barrel
AL539_12980	SSF54909	Dimeric alpha+beta barrel
AL539_12985	SSF50447	Translation proteins
AL539_12985	SSF55186	ThrRS/AlaRS common domain
AL539_12990	SSF55729	Acyl-CoA N-acyltransferases (Nat)
AL539_12995	SSF51161	Trimeric LpxA-like enzymes
AL539_13005	SSF50475	FMN-binding split barrel
AL539_13010	SSF54913	GlnB-like
AL539_13025	SSF55729	Acyl-CoA N-acyltransferases (Nat)
AL539_13030	SSF143120	YefM-like
AL539_13055	SSF160424	BH3703-like
AL539_13105	SSF57783	Zinc beta-ribbon
AL539_13105	SSF82057	Prokaryotic SH3-related domain
AL539_13135	SSF51316	Mss4-like
AL539_13195	SSF53098	Ribonuclease H-like
AL539_13200	SSF53098	Ribonuclease H-like
AL539_13205	SSF46689	Homeodomain-like
AL539_13215	SSF55811	Nudix
AL539_13290	SSF52317	Class I glutamine amidotransferase-like
AL539_13295	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
AL539_13315	SSF50044	SH3-domain
AL539_13325	SSF143880	NE0471 N-terminal domain-like
AL539_13350	SSF52091	SpoIIaa-like
AL539_13360	SSF160631	SMI1/KNR4-like
AL539_13365	SSF56112	Protein kinase-like (PK-like)
AL539_13410	SSF53955	Lysozyme-like
AL539_13640	SSF143120	YefM-like
AL539_13645	SSF143011	RelE-like
AL539_13660	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_13665	SSF55729	Acyl-CoA N-acyltransferases (Nat)
AL539_13680	SSF143011	RelE-like
AL539_13685	SSF143120	YefM-like
AL539_13690	SSF143011	RelE-like
AL539_13705	SSF55729	Acyl-CoA N-acyltransferases (Nat)
AL539_13710	SSF81301	Nucleotidyltransferase
AL539_13730	SSF143120	YefM-like
AL539_13770	SSF81301	Nucleotidyltransferase
AL539_13775	SSF56349	DNA breaking-rejoining enzymes
AL539_13785	SSF109604	HD-domain/PDEase-like
AL539_13790	SSF55729	Acyl-CoA N-acyltransferases (Nat)
AL539_13795	SSF46689	Homeodomain-like
AL539_13795	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_13795	SSF55021	ACT-like
AL539_13795	SSF55785	PYP-like sensor domain (PAS domain)
AL539_13815	SSF117457	FumA C-terminal domain-like
AL539_13825	SSF56322	ADC synthase
AL539_13830	SSF47384	Homodimeric domain of signal transducing histidine kinase
AL539_13830	SSF52172	CheY-like
AL539_13830	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
AL539_13835	SSF111126	Ligand-binding domain in the NO signalling and Golgi transport
AL539_13840	SSF55811	Nudix
AL539_13850	SSF143548	Serine metabolism enzymes domain
AL539_13855	SSF141868	EAL domain-like
AL539_13860	SSF55729	Acyl-CoA N-acyltransferases (Nat)
AL539_13865	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
AL539_13870	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
AL539_13875	SSF50249	Nucleic acid-binding proteins
AL539_13875	SSF55681	Class II aaRS and biotin synthetases
AL539_13885	SSF46785	"Winged helix" DNA-binding domain
AL539_13885	SSF53383	PLP-dependent transferases
AL539_13900	SSF53383	PLP-dependent transferases
AL539_13905	SSF56925	OMPA-like
AL539_13910	SSF51206	cAMP-binding domain-like
AL539_13910	SSF54631	CBS-domain pair
AL539_13915	SSF53098	Ribonuclease H-like
AL539_13920	SSF103190	Sensory domain-like
AL539_13920	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
AL539_13930	SSF46785	"Winged helix" DNA-binding domain
AL539_13935	SSF46894	C-terminal effector domain of the bipartite response regulators
AL539_13935	SSF52172	CheY-like
AL539_13940	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
AL539_13970	SSF56281	Metallo-hydrolase/oxidoreductase
AL539_13975	SSF55166	Hedgehog/DD-peptidase
AL539_13980	SSF141523	L,D-transpeptidase catalytic domain-like
AL539_13980	SSF53955	Lysozyme-like
AL539_13985	SSF50969	YVTN repeat-like/Quinoprotein amine dehydrogenase
AL539_13995	SSF46626	Cytochrome c
AL539_14005	SSF142695	RibA-like
AL539_14020	SSF52833	Thioredoxin-like
AL539_14035	SSF54862	4Fe-4S ferredoxins
AL539_14040	SSF48695	Multiheme cytochromes
AL539_14045	SSF48695	Multiheme cytochromes
AL539_14055	SSF48452	TPR-like
AL539_14060	SSF101904	GyrA/ParC C-terminal domain-like
AL539_14060	SSF56719	Type II DNA topoisomerase
AL539_14065	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
AL539_14075	SSF48168	R1 subunit of ribonucleotide reductase, N-terminal domain
AL539_14075	SSF51998	PFL-like glycyl radical enzymes
AL539_14080	SSF47240	Ferritin-like
AL539_14085	SSF54292	2Fe-2S ferredoxin-like
AL539_14090	SSF142433	CinA-like
AL539_14090	SSF53218	Molybdenum cofactor biosynthesis proteins
AL539_14100	SSF55021	ACT-like
AL539_14105	SSF50621	Alanine racemase C-terminal domain-like
AL539_14105	SSF51419	PLP-binding barrel
AL539_14110	SSF51735	NAD(P)-binding Rossmann-fold domains
AL539_14115	SSF53383	PLP-dependent transferases
AL539_14145	SSF46600	C-terminal UvrC-binding domain of UvrB
AL539_14145	SSF47781	RuvA domain 2-like
AL539_14145	SSF82771	GIY-YIG endonuclease
AL539_14150	SSF46894	C-terminal effector domain of the bipartite response regulators
AL539_14150	SSF52172	CheY-like
AL539_14155	SSF53098	Ribonuclease H-like
AL539_14155	SSF56672	DNA/RNA polymerases
AL539_14160	SSF81301	Nucleotidyltransferase
AL539_14165	SSF50104	Translation proteins SH3-like domain
AL539_14165	SSF50249	Nucleic acid-binding proteins
AL539_14170	SSF102816	Putative dsDNA mimic
AL539_14175	SSF55120	Pseudouridine synthase
AL539_14175	SSF55174	Alpha-L RNA-binding motif
AL539_14180	SSF51120	beta-Roll
AL539_14185	SSF55821	YrdC/RibB
AL539_14190	SSF89550	PHP domain-like
AL539_14200	SSF56322	ADC synthase
AL539_14205	SSF52317	Class I glutamine amidotransferase-like
AL539_14210	SSF47648	Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
AL539_14210	SSF52418	Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
AL539_14215	SSF51366	Ribulose-phoshate binding barrel
AL539_14220	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
AL539_14225	SSF51366	Ribulose-phoshate binding barrel
AL539_14230	SSF46785	"Winged helix" DNA-binding domain
AL539_14230	SSF51206	cAMP-binding domain-like
AL539_14235	SSF56801	Acetyl-CoA synthetase-like
AL539_14245	SSF118215	Proton glutamate symport protein
AL539_14255	SSF47384	Homodimeric domain of signal transducing histidine kinase
AL539_14255	SSF52172	CheY-like
AL539_14255	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
AL539_14270	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
AL539_14275	SSF54909	Dimeric alpha+beta barrel
AL539_14285	SSF51726	UROD/MetE-like
AL539_14290	SSF46785	"Winged helix" DNA-binding domain
AL539_14290	SSF53850	Periplasmic binding protein-like II
AL539_14305	SSF141868	EAL domain-like
AL539_14305	SSF54631	CBS-domain pair
AL539_14305	SSF55785	PYP-like sensor domain (PAS domain)
AL539_14310	SSF102114	Radical SAM enzymes
AL539_14340	SSF53448	Nucleotide-diphospho-sugar transferases
AL539_14345	SSF46894	C-terminal effector domain of the bipartite response regulators
AL539_14345	SSF52172	CheY-like
AL539_14350	SSF47384	Homodimeric domain of signal transducing histidine kinase
AL539_14350	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
AL539_14355	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
AL539_14360	SSF52499	Isochorismatase-like hydrolases
AL539_14365	SSF46785	"Winged helix" DNA-binding domain
AL539_14365	SSF53850	Periplasmic binding protein-like II
AL539_14370	SSF111369	HlyD-like secretion proteins
AL539_14380	SSF51726	UROD/MetE-like
AL539_14390	SSF56959	Leukocidin-like
AL539_14400	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_14415	SSF56954	Outer membrane efflux proteins (OEP)
AL539_14420	SSF111369	HlyD-like secretion proteins
AL539_14440	SSF52833	Thioredoxin-like
AL539_14445	SSF52833	Thioredoxin-like
AL539_14455	SSF46894	C-terminal effector domain of the bipartite response regulators
AL539_14455	SSF52172	CheY-like
AL539_14460	SSF47384	Homodimeric domain of signal transducing histidine kinase
AL539_14460	SSF53850	Periplasmic binding protein-like II
AL539_14460	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
AL539_14465	SSF54862	4Fe-4S ferredoxins
AL539_14475	SSF50692	ADC-like
AL539_14475	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
AL539_14480	SSF46626	Cytochrome c
AL539_14485	SSF46626	Cytochrome c
AL539_14500	SSF159594	XCC0632-like
AL539_14515	SSF53850	Periplasmic binding protein-like II
AL539_14520	SSF51366	Ribulose-phoshate binding barrel
AL539_14525	SSF81901	HCP-like
AL539_14535	SSF47729	IHF-like DNA-binding proteins
AL539_14540	SSF50249	Nucleic acid-binding proteins
AL539_14545	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_14550	SSF52096	ClpP/crotonase
AL539_14555	SSF51735	NAD(P)-binding Rossmann-fold domains
AL539_14560	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_14565	SSF56672	DNA/RNA polymerases
AL539_14575	SSF50341	CheW-like
AL539_14575	SSF52172	CheY-like
AL539_14580	SSF46785	"Winged helix" DNA-binding domain
AL539_14580	SSF53067	Actin-like ATPase domain
AL539_14585	SSF50800	PK beta-barrel domain-like
AL539_14585	SSF51621	Phosphoenolpyruvate/pyruvate domain
AL539_14585	SSF52935	PK C-terminal domain-like
AL539_14590	SSF52151	FabD/lysophospholipase-like
AL539_14600	SSF56925	OMPA-like
AL539_14605	SSF161070	SNF-like
AL539_14615	SSF55604	Glucose permease domain IIB
AL539_14620	SSF51556	Metallo-dependent hydrolases
AL539_14625	SSF48019	post-AAA+ oligomerization domain-like
AL539_14625	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_14630	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_14640	SSF56752	D-aminoacid aminotransferase-like PLP-dependent enzymes
AL539_14645	SSF53901	Thiolase-like
AL539_14650	SSF47336	ACP-like
AL539_14655	SSF51735	NAD(P)-binding Rossmann-fold domains
AL539_14660	SSF52151	FabD/lysophospholipase-like
AL539_14660	SSF55048	Probable ACP-binding domain of malonyl-CoA ACP transacylase
AL539_14665	SSF53901	Thiolase-like
AL539_14670	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
AL539_14675	SSF57829	Zn-binding ribosomal proteins
AL539_14685	SSF52972	ITPase-like
AL539_14690	SSF55120	Pseudouridine synthase
AL539_14690	SSF55174	Alpha-L RNA-binding motif
AL539_14700	SSF50249	Nucleic acid-binding proteins
AL539_14710	SSF52091	SpoIIaa-like
AL539_14715	SSF52788	Phosphotyrosine protein phosphatases I
AL539_14720	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_14730	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_14735	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_14740	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
AL539_14740	SSF50249	Nucleic acid-binding proteins
AL539_14740	SSF52374	Nucleotidylyl transferase
AL539_14740	SSF57770	Methionyl-tRNA synthetase (MetRS), Zn-domain
AL539_14765	SSF46785	"Winged helix" DNA-binding domain
AL539_14765	SSF48008	GntR ligand-binding domain-like
AL539_14775	SSF158442	DsbB-like
AL539_14780	SSF103642	Sec-C motif
AL539_14785	SSF51395	FMN-linked oxidoreductases
AL539_14790	SSF55073	Nucleotide cyclase
AL539_14795	SSF51011	Glycosyl hydrolase domain
AL539_14795	SSF51445	(Trans)glycosidases
AL539_14795	SSF81296	E set domains
AL539_14800	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_14810	SSF53822	Periplasmic binding protein-like I
AL539_14820	SSF53067	Actin-like ATPase domain
AL539_14825	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_14825	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
AL539_14825	SSF75138	HprK N-terminal domain-like
AL539_14835	SSF47616	GST C-terminal domain-like
AL539_14835	SSF52833	Thioredoxin-like
AL539_14840	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_14845	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_14850	SSF161098	MetI-like
AL539_14855	SSF161098	MetI-like
AL539_14860	SSF53850	Periplasmic binding protein-like II
AL539_14870	SSF54690	Molybdopterin synthase subunit MoaE
AL539_14875	SSF54285	MoaD/ThiS
AL539_14880	SSF55040	Molybdenum cofactor biosynthesis protein C, MoaC
AL539_14885	SSF53218	Molybdenum cofactor biosynthesis proteins
AL539_14890	SSF102114	Radical SAM enzymes
AL539_14895	SSF142338	CofD-like
AL539_14900	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
AL539_14905	SSF46689	Homeodomain-like
AL539_14905	SSF52172	CheY-like
AL539_14905	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_14910	SSF46600	C-terminal UvrC-binding domain of UvrB
AL539_14910	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_14920	SSF51998	PFL-like glycyl radical enzymes
AL539_14930	SSF54862	4Fe-4S ferredoxins
AL539_14935	SSF142019	Nqo1 FMN-binding domain-like
AL539_14935	SSF46548	alpha-helical ferredoxin
AL539_14955	SSF48150	DNA-glycosylase
AL539_14960	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
AL539_14970	SSF103088	OmpA-like
AL539_14980	SSF53098	Ribonuclease H-like
AL539_14990	SSF52833	Thioredoxin-like
AL539_15005	SSF52833	Thioredoxin-like
AL539_15010	SSF46609	Fe,Mn superoxide dismutase (SOD), N-terminal domain
AL539_15010	SSF54719	Fe,Mn superoxide dismutase (SOD), C-terminal domain
AL539_15020	SSF51735	NAD(P)-binding Rossmann-fold domains
AL539_15025	SSF53720	ALDH-like
AL539_15025	SSF56796	Dehydroquinate synthase-like
AL539_15035	SSF81324	Voltage-gated potassium channels
AL539_15040	SSF51735	NAD(P)-binding Rossmann-fold domains
AL539_15040	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
AL539_15055	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
AL539_15065	SSF158651	YejL-like
AL539_15070	SSF53649	Alkaline phosphatase-like
AL539_15080	SSF52768	Arginase/deacetylase
AL539_15085	SSF51735	NAD(P)-binding Rossmann-fold domains
AL539_15095	SSF56712	Prokaryotic type I DNA topoisomerase
AL539_15100	SSF55469	FMN-dependent nitroreductase-like
AL539_15105	SSF103473	MFS general substrate transporter
AL539_15110	SSF51395	FMN-linked oxidoreductases
AL539_15110	SSF51971	Nucleotide-binding domain
AL539_15115	SSF52096	ClpP/crotonase
AL539_15120	SSF53774	Glutaminase/Asparaginase
AL539_15130	SSF81901	HCP-like
AL539_15135	SSF51316	Mss4-like
AL539_15140	SSF51735	NAD(P)-binding Rossmann-fold domains
AL539_15140	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
AL539_15145	SSF74650	Galactose mutarotase-like
AL539_15150	SSF103190	Sensory domain-like
AL539_15150	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
AL539_15155	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
AL539_15160	SSF159501	EreA/ChaN-like
AL539_15175	SSF53649	Alkaline phosphatase-like
AL539_15185	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
AL539_15190	SSF54909	Dimeric alpha+beta barrel
AL539_15195	SSF50182	Sm-like ribonucleoproteins
AL539_15195	SSF82689	Mechanosensitive channel protein MscS (YggB), C-terminal domain
AL539_15195	SSF82861	Mechanosensitive channel protein MscS (YggB), transmembrane region
AL539_15215	SSF81338	Aquaporin-like
AL539_15220	SSF111304	Recombination protein RecR
AL539_15225	SSF82607	YbaB-like
AL539_15230	SSF48019	post-AAA+ oligomerization domain-like
AL539_15230	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_15235	SSF53271	PRTase-like
AL539_15250	SSF52172	CheY-like
AL539_15255	SSF46785	"Winged helix" DNA-binding domain
AL539_15255	SSF53850	Periplasmic binding protein-like II
AL539_15260	SSF53271	PRTase-like
AL539_15260	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
AL539_15270	SSF110997	Sporulation related repeat
AL539_15275	SSF53244	MurD-like peptide ligases, peptide-binding domain
AL539_15275	SSF53623	MurD-like peptide ligases, catalytic domain
AL539_15280	SSF52096	ClpP/crotonase
AL539_15290	SSF55120	Pseudouridine synthase
AL539_15300	SSF51735	NAD(P)-binding Rossmann-fold domains
AL539_15300	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
AL539_15305	SSF51735	NAD(P)-binding Rossmann-fold domains
AL539_15305	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
AL539_15315	SSF53901	Thiolase-like
AL539_15320	SSF51905	FAD/NAD(P)-binding domain
AL539_15325	SSF52218	Flavoproteins
AL539_15355	SSF103263	Chorismate synthase, AroC
AL539_15360	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
AL539_15365	SSF160443	SMR domain-like
AL539_15370	SSF53254	Phosphoglycerate mutase-like
AL539_15375	SSF63411	LuxS/MPP-like metallohydrolase
AL539_15385	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
AL539_15385	SSF51735	NAD(P)-binding Rossmann-fold domains
AL539_15385	SSF52096	ClpP/crotonase
AL539_15390	SSF53901	Thiolase-like
AL539_15400	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
AL539_15400	SSF88946	Sigma2 domain of RNA polymerase sigma factors
AL539_15410	SSF56935	Porins
AL539_15415	SSF56935	Porins
AL539_15420	SSF56349	DNA breaking-rejoining enzymes
AL539_15430	SSF56349	DNA breaking-rejoining enzymes
AL539_15445	SSF51621	Phosphoenolpyruvate/pyruvate domain
AL539_15455	SSF46689	Homeodomain-like
AL539_15465	SSF48452	TPR-like
AL539_15475	SSF52833	Thioredoxin-like
AL539_15485	SSF82093	Heme chaperone CcmE
AL539_15505	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_15515	SSF50341	CheW-like
AL539_15520	SSF50341	CheW-like
AL539_15525	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_15530	SSF52172	CheY-like
AL539_15530	SSF52738	Methylesterase CheB, C-terminal domain
AL539_15535	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
AL539_15535	SSF47384	Homodimeric domain of signal transducing histidine kinase
AL539_15535	SSF50341	CheW-like
AL539_15535	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
AL539_15540	SSF75708	Chemotaxis phosphatase CheZ
AL539_15545	SSF52172	CheY-like
AL539_15550	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
AL539_15550	SSF88946	Sigma2 domain of RNA polymerase sigma factors
AL539_15555	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_15560	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_15570	SSF160544	EscU C-terminal domain-like
AL539_15595	SSF101801	Surface presentation of antigens (SPOA)
AL539_15600	SSF101801	Surface presentation of antigens (SPOA)
AL539_15600	SSF103039	CheC-like
AL539_15615	SSF54909	Dimeric alpha+beta barrel
AL539_15620	SSF109604	HD-domain/PDEase-like
AL539_15625	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_15635	SSF48029	FliG
AL539_15650	SSF46689	Homeodomain-like
AL539_15650	SSF52172	CheY-like
AL539_15650	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_15655	SSF47384	Homodimeric domain of signal transducing histidine kinase
AL539_15655	SSF55785	PYP-like sensor domain (PAS domain)
AL539_15655	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
AL539_15660	SSF46689	Homeodomain-like
AL539_15660	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_15665	SSF101116	Flagellar export chaperone FliS
AL539_15680	SSF160214	FlaG-like
AL539_15685	SSF64518	Phase 1 flagellin
AL539_15690	SSF64518	Phase 1 flagellin
AL539_15700	SSF64518	Phase 1 flagellin
AL539_15705	SSF54909	Dimeric alpha+beta barrel
AL539_15730	SSF52833	Thioredoxin-like
AL539_15735	SSF53187	Zn-dependent exopeptidases
AL539_15735	SSF55031	Bacterial exopeptidase dimerisation domain
AL539_15740	SSF55166	Hedgehog/DD-peptidase
AL539_15755	SSF51569	Aldolase
AL539_15760	SSF55021	ACT-like
AL539_15765	SSF52833	Thioredoxin-like
AL539_15775	SSF64307	SirA-like
AL539_15780	SSF48452	TPR-like
AL539_15785	SSF52833	Thioredoxin-like
AL539_15790	SSF52218	Flavoproteins
AL539_15810	SSF53271	PRTase-like
AL539_15815	SSF55326	PurM N-terminal domain-like
AL539_15815	SSF56042	PurM C-terminal domain-like
AL539_15820	SSF53328	Formyltransferase
AL539_15825	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
AL539_15830	SSF53697	SIS domain
AL539_15835	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
AL539_15835	SSF56645	Acyl-CoA dehydrogenase NM domain-like
AL539_15840	SSF52091	SpoIIaa-like
AL539_15845	SSF55729	Acyl-CoA N-acyltransferases (Nat)
AL539_15865	SSF53098	Ribonuclease H-like
AL539_15870	SSF53098	Ribonuclease H-like
AL539_15875	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
AL539_15880	SSF56281	Metallo-hydrolase/oxidoreductase
AL539_15885	SSF53955	Lysozyme-like
AL539_15885	SSF54106	LysM domain
AL539_15895	SSF56219	DNase I-like
AL539_15900	SSF54913	GlnB-like
AL539_15905	SSF46626	Cytochrome c
AL539_15910	SSF52402	Adenine nucleotide alpha hydrolases-like
AL539_15910	SSF56037	PheT/TilS domain
AL539_15910	SSF82829	MesJ substrate recognition domain-like
AL539_15915	SSF52096	ClpP/crotonase
AL539_15920	SSF50249	Nucleic acid-binding proteins
AL539_15920	SSF89550	PHP domain-like
AL539_15925	SSF53098	Ribonuclease H-like
AL539_15930	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
AL539_15935	SSF51161	Trimeric LpxA-like enzymes
AL539_15940	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
AL539_15945	SSF51161	Trimeric LpxA-like enzymes
AL539_15950	SSF111384	OmpH-like
AL539_15960	SSF50156	PDZ domain-like
AL539_15965	SSF51735	NAD(P)-binding Rossmann-fold domains
AL539_15965	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
AL539_15965	SSF69055	1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain
AL539_15975	SSF64005	Undecaprenyl diphosphate synthase
AL539_15980	SSF55194	Ribosome recycling factor, RRF
AL539_15985	SSF53633	Carbamate kinase-like
AL539_15990	SSF46934	UBA-like
AL539_15990	SSF54713	Elongation factor Ts (EF-Ts), dimerisation domain
AL539_15995	SSF52313	Ribosomal protein S2
AL539_16000	SSF55920	Creatinase/aminopeptidase
AL539_16005	SSF109604	HD-domain/PDEase-like
AL539_16005	SSF55021	ACT-like
AL539_16005	SSF81301	Nucleotidyltransferase
AL539_16005	SSF81593	Nucleotidyltransferase substrate binding subunit/domain
AL539_16015	SSF55120	Pseudouridine synthase
AL539_16020	SSF158452	YqcC-like
AL539_16035	SSF55729	Acyl-CoA N-acyltransferases (Nat)
AL539_16055	SSF53901	Thiolase-like
AL539_16060	SSF51735	NAD(P)-binding Rossmann-fold domains
AL539_16065	SSF56281	Metallo-hydrolase/oxidoreductase
AL539_16070	SSF56801	Acetyl-CoA synthetase-like
AL539_16075	SSF56059	Glutathione synthetase ATP-binding domain-like
AL539_16090	SSF57840	Ribosomal protein L36
AL539_16095	SSF143800	L28p-like
AL539_16100	SSF118196	YaeB-like
AL539_16105	SSF52954	Class II aaRS ABD-related
AL539_16105	SSF55681	Class II aaRS and biotin synthetases
AL539_16105	SSF55826	YbaK/ProRS associated domain
AL539_16110	SSF158682	TerB-like
AL539_16125	SSF161070	SNF-like
AL539_16130	SSF51055	Carbohydrate binding domain
AL539_16130	SSF51445	(Trans)glycosidases
AL539_16140	SSF54534	FKBP-like
AL539_16145	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_16150	SSF100879	Lesion bypass DNA polymerase (Y-family), little finger domain
AL539_16150	SSF56672	DNA/RNA polymerases
AL539_16160	SSF52172	CheY-like
AL539_16160	SSF55073	Nucleotide cyclase
AL539_16170	SSF143631	ApbE-like
AL539_16175	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
AL539_16175	SSF54292	2Fe-2S ferredoxin-like
AL539_16175	SSF63380	Riboflavin synthase domain-like
AL539_16205	SSF82657	BolA-like
AL539_16210	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
AL539_16220	SSF50891	Cyclophilin-like
AL539_16225	SSF103473	MFS general substrate transporter
AL539_16230	SSF51182	RmlC-like cupins
AL539_16235	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
AL539_16235	SSF88946	Sigma2 domain of RNA polymerase sigma factors
AL539_16245	SSF88697	PUA domain-like
AL539_16255	SSF111364	Tsx-like channel
AL539_16260	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
AL539_16260	SSF51735	NAD(P)-binding Rossmann-fold domains
AL539_16265	SSF52317	Class I glutamine amidotransferase-like
AL539_16270	SSF53383	PLP-dependent transferases
AL539_16275	SSF55073	Nucleotide cyclase
AL539_16280	SSF82649	SufE/NifU
AL539_16285	SSF69572	Activating enzymes of the ubiquitin-like proteins
AL539_16290	SSF50685	Barwin-like endoglucanases
AL539_16305	SSF53633	Carbamate kinase-like
AL539_16305	SSF55729	Acyl-CoA N-acyltransferases (Nat)
AL539_16325	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_16330	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_16330	SSF52980	Restriction endonuclease-like
AL539_16335	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_16335	SSF52980	Restriction endonuclease-like
AL539_16340	SSF53649	Alkaline phosphatase-like
AL539_16350	SSF46785	"Winged helix" DNA-binding domain
AL539_16350	SSF53850	Periplasmic binding protein-like II
AL539_16360	SSF82649	SufE/NifU
AL539_16370	SSF51161	Trimeric LpxA-like enzymes
AL539_16375	SSF51695	PLC-like phosphodiesterases
AL539_16380	SSF103473	MFS general substrate transporter
AL539_16390	SSF81338	Aquaporin-like
AL539_16395	SSF53067	Actin-like ATPase domain
AL539_16400	SSF100950	NagB/RpiA/CoA transferase-like
AL539_16400	SSF46785	"Winged helix" DNA-binding domain
AL539_16405	SSF51905	FAD/NAD(P)-binding domain
AL539_16410	SSF143865	CorA soluble domain-like
AL539_16410	SSF144083	Magnesium transport protein CorA, transmembrane region
AL539_16420	SSF110857	Gamma-glutamyl cyclotransferase-like
AL539_16425	SSF56925	OMPA-like
AL539_16430	SSF47413	lambda repressor-like DNA-binding domains
AL539_16430	SSF53822	Periplasmic binding protein-like I
AL539_16435	SSF46785	"Winged helix" DNA-binding domain
AL539_16435	SSF53850	Periplasmic binding protein-like II
AL539_16445	SSF46894	C-terminal effector domain of the bipartite response regulators
AL539_16470	SSF56935	Porins
AL539_16475	SSF56801	Acetyl-CoA synthetase-like
AL539_16485	SSF46785	"Winged helix" DNA-binding domain
AL539_16485	SSF53850	Periplasmic binding protein-like II
AL539_16490	SSF50447	Translation proteins
AL539_16490	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_16490	SSF54211	Ribosomal protein S5 domain 2-like
AL539_16490	SSF54980	EF-G C-terminal domain-like
AL539_16495	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_16495	SSF54211	Ribosomal protein S5 domain 2-like
AL539_16500	SSF141371	PilZ domain-like
AL539_16505	SSF56784	HAD-like
AL539_16515	SSF53167	Purine and uridine phosphorylases
AL539_16520	SSF143856	DeoB insert domain-like
AL539_16520	SSF53649	Alkaline phosphatase-like
AL539_16525	SSF47648	Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
AL539_16525	SSF52418	Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
AL539_16525	SSF54680	Pyrimidine nucleoside phosphorylase C-terminal domain
AL539_16530	SSF51569	Aldolase
AL539_16540	SSF51556	Metallo-dependent hydrolases
AL539_16550	SSF50447	Translation proteins
AL539_16550	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_16550	SSF54980	EF-G C-terminal domain-like
AL539_16555	SSF55729	Acyl-CoA N-acyltransferases (Nat)
AL539_16560	SSF102220	DNA polymerase III psi subunit
AL539_16570	SSF55729	Acyl-CoA N-acyltransferases (Nat)
AL539_16575	SSF55718	SCP-like
AL539_16585	SSF141868	EAL domain-like
AL539_16585	SSF55073	Nucleotide cyclase
AL539_16585	SSF55785	PYP-like sensor domain (PAS domain)
AL539_16605	SSF46785	"Winged helix" DNA-binding domain
AL539_16610	SSF48452	TPR-like
AL539_16615	SSF50249	Nucleic acid-binding proteins
AL539_16615	SSF54211	Ribosomal protein S5 domain 2-like
AL539_16615	SSF54791	Eukaryotic type KH-domain (KH-domain type I)
AL539_16615	SSF55666	Ribonuclease PH domain 2-like
AL539_16620	SSF47060	S15/NS1 RNA-binding domain
AL539_16625	SSF55120	Pseudouridine synthase
AL539_16625	SSF88697	PUA domain-like
AL539_16630	SSF89919	Ribosome-binding factor A, RbfA
AL539_16635	SSF46955	Putative DNA-binding domain
AL539_16635	SSF50447	Translation proteins
AL539_16635	SSF52156	Initiation factor IF2/eIF5b, domain 3
AL539_16635	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_16640	SSF47794	Rad51 N-terminal domain-like
AL539_16640	SSF50249	Nucleic acid-binding proteins
AL539_16640	SSF54814	Prokaryotic type KH domain (KH-domain type II)
AL539_16640	SSF69705	Transcription factor NusA, N-terminal domain
AL539_16645	SSF74942	YhbC-like, C-terminal domain
AL539_16645	SSF75420	YhbC-like, N-terminal domain
AL539_16670	SSF53738	Phosphoglucomutase, first 3 domains
AL539_16670	SSF55957	Phosphoglucomutase, C-terminal domain
AL539_16675	SSF51717	Dihydropteroate synthetase-like
AL539_16680	SSF140990	FtsH protease domain-like
AL539_16680	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_16685	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
AL539_16690	SSF75471	YhbY-like
AL539_16695	SSF46557	GreA transcript cleavage protein, N-terminal domain
AL539_16695	SSF54534	FKBP-like
AL539_16700	SSF56935	Porins
AL539_16705	SSF56601	beta-lactamase/transpeptidase-like
AL539_16710	SSF161093	MgtE membrane domain-like
AL539_16715	SSF52374	Nucleotidylyl transferase
AL539_16715	SSF55174	Alpha-L RNA-binding motif
AL539_16720	SSF51261	Duplicated hybrid motif
AL539_16725	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
AL539_16725	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
AL539_16725	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
AL539_16730	SSF111369	HlyD-like secretion proteins
AL539_16735	SSF89360	HesB-like domain
AL539_16740	SSF53383	PLP-dependent transferases
AL539_16750	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
AL539_16755	SSF158472	HAMP domain-like
AL539_16755	SSF47384	Homodimeric domain of signal transducing histidine kinase
AL539_16755	SSF52172	CheY-like
AL539_16755	SSF55785	PYP-like sensor domain (PAS domain)
AL539_16755	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
AL539_16760	SSF53850	Periplasmic binding protein-like II
AL539_16765	SSF161098	MetI-like
AL539_16770	SSF161098	MetI-like
AL539_16775	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_16780	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_16785	SSF48208	Six-hairpin glycosidases
AL539_16785	SSF81296	E set domains
AL539_16790	SSF53067	Actin-like ATPase domain
AL539_16795	SSF51445	(Trans)glycosidases
AL539_16795	SSF55545	beta-N-acetylhexosaminidase-like domain
AL539_16800	SSF48208	Six-hairpin glycosidases
AL539_16800	SSF74650	Galactose mutarotase-like
AL539_16805	SSF53738	Phosphoglucomutase, first 3 domains
AL539_16805	SSF55957	Phosphoglucomutase, C-terminal domain
AL539_16810	SSF50331	MOP-like
AL539_16810	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_16815	SSF161098	MetI-like
AL539_16820	SSF53850	Periplasmic binding protein-like II
AL539_16825	SSF111352	Ammonium transporter
AL539_16830	SSF54913	GlnB-like
AL539_16840	SSF52016	LeuD/IlvD-like
AL539_16840	SSF53732	Aconitase iron-sulfur domain
AL539_16840	SSF74778	Aconitase B, N-terminal domain
AL539_16845	SSF52151	FabD/lysophospholipase-like
AL539_16850	SSF53955	Lysozyme-like
AL539_16850	SSF56601	beta-lactamase/transpeptidase-like
AL539_16855	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_16865	SSF109635	DnaK suppressor protein DksA, alpha-hairpin domain
AL539_16865	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
AL539_16870	SSF52374	Nucleotidylyl transferase
AL539_16875	SSF81301	Nucleotidyltransferase
AL539_16875	SSF81891	Poly A polymerase C-terminal region-like
AL539_16880	SSF55083	6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK
AL539_16885	SSF51621	Phosphoenolpyruvate/pyruvate domain
AL539_16890	SSF52374	Nucleotidylyl transferase
AL539_16910	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_16915	SSF52091	SpoIIaa-like
AL539_16920	SSF53056	beta-carbonic anhydrase, cab
AL539_16925	SSF53271	PRTase-like
AL539_16930	SSF46689	Homeodomain-like
AL539_16930	SSF48498	Tetracyclin repressor-like, C-terminal domain
AL539_16935	SSF51905	FAD/NAD(P)-binding domain
AL539_16935	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
AL539_16940	SSF47005	Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
AL539_16940	SSF51230	Single hybrid motif
AL539_16940	SSF52777	CoA-dependent acyltransferases
AL539_16945	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
AL539_16945	SSF52922	TK C-terminal domain-like
AL539_16950	SSF46785	"Winged helix" DNA-binding domain
AL539_16950	SSF48008	GntR ligand-binding domain-like
AL539_16955	SSF55846	N-acetylmuramoyl-L-alanine amidase-like
AL539_16960	SSF51690	Nicotinate/Quinolinate PRTase C-terminal domain-like
AL539_16960	SSF54675	Nicotinate/Quinolinate PRTase N-terminal domain-like
AL539_16965	SSF54523	Pili subunits
AL539_16970	SSF160246	EspE N-terminal domain-like
AL539_16970	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_16985	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_16990	SSF160950	YacF-like
AL539_16995	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
AL539_17000	SSF50104	Translation proteins SH3-like domain
AL539_17005	SSF75217	alpha/beta knot
AL539_17010	SSF50346	PRC-barrel domain
AL539_17010	SSF50447	Translation proteins
AL539_17015	SSF54565	Ribosomal protein S16
AL539_17020	SSF47446	Signal peptide-binding domain
AL539_17020	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_17030	SSF54631	CBS-domain pair
AL539_17030	SSF56176	FAD-binding/transporter-associated domain-like
AL539_17035	SSF63411	LuxS/MPP-like metallohydrolase
AL539_17040	SSF53955	Lysozyme-like
AL539_17045	SSF55931	Glutamine synthetase/guanido kinase
AL539_17050	SSF63411	LuxS/MPP-like metallohydrolase
AL539_17060	SSF50129	GroES-like
AL539_17060	SSF51735	NAD(P)-binding Rossmann-fold domains
AL539_17070	SSF51230	Single hybrid motif
AL539_17070	SSF51569	Aldolase
AL539_17070	SSF89000	post-HMGL domain-like
AL539_17130	SSF117130	CsrA-like
AL539_17135	SSF53633	Carbamate kinase-like
AL539_17140	SSF101353	Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
AL539_17140	SSF50447	Translation proteins
AL539_17140	SSF55186	ThrRS/AlaRS common domain
AL539_17140	SSF55681	Class II aaRS and biotin synthetases
AL539_17150	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_17150	SSF54752	RecA protein, C-terminal domain
AL539_17155	SSF142433	CinA-like
AL539_17160	SSF48334	DNA repair protein MutS, domain III
AL539_17160	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_17160	SSF53150	DNA repair protein MutS, domain II
AL539_17160	SSF55271	DNA repair protein MutS, domain I
AL539_17165	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
AL539_17165	SSF88946	Sigma2 domain of RNA polymerase sigma factors
AL539_17170	SSF51261	Duplicated hybrid motif
AL539_17175	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
AL539_17180	SSF64167	SurE-like
AL539_17185	SSF55120	Pseudouridine synthase
AL539_17190	SSF69765	IpsF-like
AL539_17195	SSF53448	Nucleotide-diphospho-sugar transferases
AL539_17205	SSF51604	Enolase C-terminal domain-like
AL539_17205	SSF54826	Enolase N-terminal domain-like
AL539_17210	SSF52317	Class I glutamine amidotransferase-like
AL539_17210	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_17215	SSF101386	all-alpha NTP pyrophosphatases
AL539_17220	SSF109604	HD-domain/PDEase-like
AL539_17220	SSF55021	ACT-like
AL539_17220	SSF81271	TGS-like
AL539_17220	SSF81301	Nucleotidyltransferase
AL539_17230	SSF50249	Nucleic acid-binding proteins
AL539_17230	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
AL539_17240	SSF158472	HAMP domain-like
AL539_17240	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
AL539_17240	SSF47384	Homodimeric domain of signal transducing histidine kinase
AL539_17240	SSF52172	CheY-like
AL539_17240	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
AL539_17245	SSF56214	4'-phosphopantetheinyl transferase
AL539_17250	SSF63892	Pyridoxine 5'-phosphate synthase
AL539_17255	SSF50249	Nucleic acid-binding proteins
AL539_17255	SSF57863	ArfGap/RecO-like zinc finger
AL539_17260	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_17260	SSF54814	Prokaryotic type KH domain (KH-domain type II)
AL539_17265	SSF54768	dsRNA-binding domain-like
AL539_17265	SSF69065	RNase III domain-like
AL539_17270	SSF51306	LexA/Signal peptidase
AL539_17275	SSF50447	Translation proteins
AL539_17275	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_17275	SSF54980	EF-G C-terminal domain-like
AL539_17290	SSF89069	N-terminal, cytoplasmic domain of anti-sigmaE factor RseA
AL539_17295	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
AL539_17295	SSF88946	Sigma2 domain of RNA polymerase sigma factors
AL539_17305	SSF46977	Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
AL539_17305	SSF51905	FAD/NAD(P)-binding domain
AL539_17305	SSF56425	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
AL539_17315	SSF109910	YgfY-like
AL539_17320	SSF101790	Aminomethyltransferase beta-barrel domain
AL539_17320	SSF103025	Folate-binding domain
AL539_17325	SSF55826	YbaK/ProRS associated domain
AL539_17335	SSF51905	FAD/NAD(P)-binding domain
AL539_17340	SSF51905	FAD/NAD(P)-binding domain
AL539_17345	SSF101327	YgfB-like
AL539_17355	SSF102829	Cell division protein ZapA-like
AL539_17365	SSF100950	NagB/RpiA/CoA transferase-like
AL539_17370	SSF100950	NagB/RpiA/CoA transferase-like
AL539_17370	SSF75445	D-ribose-5-phosphate isomerase (RpiA), lid domain
AL539_17375	SSF51735	NAD(P)-binding Rossmann-fold domains
AL539_17375	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
AL539_17375	SSF55021	ACT-like
AL539_17385	SSF46785	"Winged helix" DNA-binding domain
AL539_17385	SSF53850	Periplasmic binding protein-like II
AL539_17395	SSF55826	YbaK/ProRS associated domain
AL539_17400	SSF50182	Sm-like ribonucleoproteins
AL539_17400	SSF82689	Mechanosensitive channel protein MscS (YggB), C-terminal domain
AL539_17400	SSF82861	Mechanosensitive channel protein MscS (YggB), transmembrane region
AL539_17405	SSF51569	Aldolase
AL539_17410	SSF53748	Phosphoglycerate kinase
AL539_17415	SSF51735	NAD(P)-binding Rossmann-fold domains
AL539_17415	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
AL539_17420	SSF56935	Porins
AL539_17425	SSF46785	"Winged helix" DNA-binding domain
AL539_17425	SSF53850	Periplasmic binding protein-like II
AL539_17430	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
AL539_17430	SSF52922	TK C-terminal domain-like
AL539_17440	SSF55973	S-adenosylmethionine synthetase
AL539_17455	SSF54060	His-Me finger endonucleases
AL539_17460	SSF75217	alpha/beta knot
AL539_17460	SSF88697	PUA domain-like
AL539_17465	SSF52440	PreATP-grasp domain
AL539_17465	SSF56059	Glutathione synthetase ATP-binding domain-like
AL539_17470	SSF143456	VC0467-like
AL539_17475	SSF53098	Ribonuclease H-like
AL539_17480	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_17485	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_17490	SSF51419	PLP-binding barrel
AL539_17495	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
AL539_17495	SSF51735	NAD(P)-binding Rossmann-fold domains
AL539_17505	SSF69786	YggU-like
AL539_17515	SSF52972	ITPase-like
AL539_17520	SSF102114	Radical SAM enzymes
AL539_17525	SSF56601	beta-lactamase/transpeptidase-like
AL539_17530	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
AL539_17535	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
AL539_17540	SSF48150	DNA-glycosylase
AL539_17540	SSF55811	Nudix
AL539_17560	SSF55718	SCP-like
AL539_17560	SSF56281	Metallo-hydrolase/oxidoreductase
AL539_17570	SSF75304	Amidase signature (AS) enzymes
AL539_17575	SSF141571	Pentapeptide repeat-like
AL539_17580	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_17585	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_17625	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
AL539_17640	SSF55729	Acyl-CoA N-acyltransferases (Nat)
AL539_17665	SSF56349	DNA breaking-rejoining enzymes
AL539_17675	SSF56349	DNA breaking-rejoining enzymes
AL539_17685	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_17695	SSF48150	DNA-glycosylase
AL539_17695	SSF55811	Nudix
AL539_17715	SSF55718	SCP-like
AL539_17715	SSF56281	Metallo-hydrolase/oxidoreductase
AL539_17725	SSF75304	Amidase signature (AS) enzymes
AL539_17730	SSF141571	Pentapeptide repeat-like
AL539_17780	SSF55729	Acyl-CoA N-acyltransferases (Nat)
AL539_17810	SSF56349	DNA breaking-rejoining enzymes
AL539_17820	SSF56349	DNA breaking-rejoining enzymes
AL539_17830	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_17845	SSF111148	YggX-like
AL539_17850	SSF53955	Lysozyme-like
AL539_17890	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
AL539_17925	SSF53720	ALDH-like
AL539_17970	SSF109604	HD-domain/PDEase-like
AL539_17975	SSF47413	lambda repressor-like DNA-binding domains
AL539_17975	SSF53822	Periplasmic binding protein-like I
AL539_17980	SSF88713	Glycoside hydrolase/deacetylase
AL539_17985	SSF51735	NAD(P)-binding Rossmann-fold domains
AL539_17985	SSF56327	LDH C-terminal domain-like
AL539_17990	SSF46973	Enzyme IIa from lactose specific PTS, IIa-lac
AL539_18000	SSF52794	PTS system IIB component-like
AL539_18005	SSF51055	Carbohydrate binding domain
AL539_18005	SSF88713	Glycoside hydrolase/deacetylase
AL539_18015	SSF51735	NAD(P)-binding Rossmann-fold domains
AL539_18040	SSF52949	Macro domain-like
AL539_18040	SSF53187	Zn-dependent exopeptidases
AL539_18045	SSF102400	DNA polymerase III chi subunit
AL539_18050	SSF46589	tRNA-binding arm
AL539_18050	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
AL539_18050	SSF50677	ValRS/IleRS/LeuRS editing domain
AL539_18050	SSF52374	Nucleotidylyl transferase
AL539_18060	SSF46785	"Winged helix" DNA-binding domain
AL539_18060	SSF55729	Acyl-CoA N-acyltransferases (Nat)
AL539_18065	SSF49785	Galactose-binding domain-like
AL539_18070	SSF89946	Hypothetical protein VC0424
AL539_18075	SSF55909	Pentein
AL539_18080	SSF53671	Aspartate/ornithine carbamoyltransferase
AL539_18090	SSF53671	Aspartate/ornithine carbamoyltransferase
AL539_18095	SSF54893	Aspartate carbamoyltransferase, Regulatory-chain, N-terminal domain
AL539_18095	SSF57825	Aspartate carbamoyltransferase, Regulatory-chain, C-terminal domain
AL539_18100	SSF55298	YjgF-like
AL539_18105	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
AL539_18110	SSF55205	EPT/RTPC-like
AL539_18115	SSF82657	BolA-like
AL539_18120	SSF52091	SpoIIaa-like
AL539_18140	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_18150	SSF53697	SIS domain
AL539_18165	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_18175	SSF69754	Ribosome binding protein Y (YfiA homologue)
AL539_18180	SSF55804	Phoshotransferase/anion transport protein
AL539_18185	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_18190	SSF55594	HPr-like
AL539_18195	SSF158791	MgtE N-terminal domain-like
AL539_18195	SSF161093	MgtE membrane domain-like
AL539_18195	SSF54631	CBS-domain pair
AL539_18200	SSF111283	Putative modulator of DNA gyrase, PmbA/TldD
AL539_18205	SSF158710	PSPTO4464-like
AL539_18210	SSF51735	NAD(P)-binding Rossmann-fold domains
AL539_18210	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
AL539_18215	SSF55120	Pseudouridine synthase
AL539_18225	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_18230	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_18230	SSF88723	PIN domain-like
AL539_18235	SSF111283	Putative modulator of DNA gyrase, PmbA/TldD
AL539_18240	SSF56317	Carbon-nitrogen hydrolase
AL539_18250	SSF50249	Nucleic acid-binding proteins
AL539_18255	SSF52972	ITPase-like
AL539_18270	SSF53067	Actin-like ATPase domain
AL539_18290	SSF141868	EAL domain-like
AL539_18290	SSF55073	Nucleotide cyclase
AL539_18295	SSF50249	Nucleic acid-binding proteins
AL539_18300	SSF46894	C-terminal effector domain of the bipartite response regulators
AL539_18305	SSF53448	Nucleotide-diphospho-sugar transferases
AL539_18310	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_18320	SSF53383	PLP-dependent transferases
AL539_18330	SSF53633	Carbamate kinase-like
AL539_18330	SSF55021	ACT-like
AL539_18335	SSF47644	Methionine synthase domain
AL539_18335	SSF51717	Dihydropteroate synthetase-like
AL539_18335	SSF52242	Cobalamin (vitamin B12)-binding domain
AL539_18335	SSF56507	Methionine synthase activation domain-like
AL539_18335	SSF82282	Homocysteine S-methyltransferase
AL539_18400	SSF52402	Adenine nucleotide alpha hydrolases-like
AL539_18405	SSF55124	Nitrite/Sulfite reductase N-terminal domain-like
AL539_18405	SSF56014	Nitrite and sulphite reductase 4Fe-4S domain-like
AL539_18410	SSF52218	Flavoproteins
AL539_18410	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
AL539_18410	SSF63380	Riboflavin synthase domain-like
AL539_18430	SSF51395	FMN-linked oxidoreductases
AL539_18435	SSF46785	"Winged helix" DNA-binding domain
AL539_18440	SSF103039	CheC-like
AL539_18445	SSF53697	SIS domain
AL539_18450	SSF111038	YjbQ-like
AL539_18455	SSF50621	Alanine racemase C-terminal domain-like
AL539_18455	SSF51419	PLP-binding barrel
AL539_18460	SSF48024	N-terminal domain of DnaB helicase
AL539_18460	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_18465	SSF56935	Porins
AL539_18470	SSF55653	Ribosomal protein L9 C-domain
AL539_18470	SSF55658	L9 N-domain-like
AL539_18475	SSF46911	Ribosomal protein S18
AL539_18480	SSF50249	Nucleic acid-binding proteins
AL539_18485	SSF54995	Ribosomal protein S6
AL539_18490	SSF51366	Ribulose-phoshate binding barrel
AL539_18495	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
AL539_18500	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_18505	SSF56796	Dehydroquinate synthase-like
AL539_18510	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_18535	SSF53067	Actin-like ATPase domain
AL539_18540	SSF53955	Lysozyme-like
AL539_18540	SSF56601	beta-lactamase/transpeptidase-like
AL539_18545	SSF46785	"Winged helix" DNA-binding domain
AL539_18545	SSF53850	Periplasmic binding protein-like II
AL539_18550	SSF52833	Thioredoxin-like
AL539_18555	SSF51905	FAD/NAD(P)-binding domain
AL539_18555	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
AL539_18565	SSF48557	L-aspartase-like
AL539_18565	SSF55729	Acyl-CoA N-acyltransferases (Nat)
AL539_18570	SSF52402	Adenine nucleotide alpha hydrolases-like
AL539_18570	SSF69864	Argininosuccinate synthetase, C-terminal domain
AL539_18575	SSF53633	Carbamate kinase-like
AL539_18580	SSF51735	NAD(P)-binding Rossmann-fold domains
AL539_18580	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
AL539_18585	SSF53187	Zn-dependent exopeptidases
AL539_18585	SSF55031	Bacterial exopeptidase dimerisation domain
AL539_18590	SSF51621	Phosphoenolpyruvate/pyruvate domain
AL539_18595	SSF46785	"Winged helix" DNA-binding domain
AL539_18600	SSF51730	FAD-linked oxidoreductase
AL539_18605	SSF51735	NAD(P)-binding Rossmann-fold domains
AL539_18605	SSF53633	Carbamate kinase-like
AL539_18605	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
AL539_18610	SSF53383	PLP-dependent transferases
AL539_18615	SSF47598	Ribbon-helix-helix
AL539_18620	SSF51735	NAD(P)-binding Rossmann-fold domains
AL539_18620	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
AL539_18625	SSF47240	Ferritin-like
AL539_18635	SSF50447	Translation proteins
AL539_18635	SSF50465	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
AL539_18635	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_18640	SSF50447	Translation proteins
AL539_18640	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_18640	SSF54211	Ribosomal protein S5 domain 2-like
AL539_18640	SSF54980	EF-G C-terminal domain-like
AL539_18645	SSF47973	Ribosomal protein S7
AL539_18650	SSF50249	Nucleic acid-binding proteins
AL539_18655	SSF75169	DsrEFH-like
AL539_18660	SSF75169	DsrEFH-like
AL539_18665	SSF75169	DsrEFH-like
AL539_18675	SSF54534	FKBP-like
AL539_18680	SSF50998	Quinoprotein alcohol dehydrogenase-like
AL539_18690	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
AL539_18700	SSF54534	FKBP-like
AL539_18710	SSF51735	NAD(P)-binding Rossmann-fold domains
AL539_18715	SSF52218	Flavoproteins
AL539_18720	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_18730	SSF53474	alpha/beta-Hydrolases
AL539_18735	SSF118001	YehU-like
AL539_18740	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_18745	SSF46785	"Winged helix" DNA-binding domain
AL539_18745	SSF51206	cAMP-binding domain-like
AL539_18755	SSF53720	ALDH-like
AL539_18760	SSF55729	Acyl-CoA N-acyltransferases (Nat)
AL539_18765	SSF53383	PLP-dependent transferases
AL539_18770	SSF52317	Class I glutamine amidotransferase-like
AL539_18775	SSF46785	"Winged helix" DNA-binding domain
AL539_18780	SSF103481	Multidrug resistance efflux transporter EmrE
AL539_18785	SSF52218	Flavoproteins
AL539_18790	SSF53187	Zn-dependent exopeptidases
AL539_18790	SSF55031	Bacterial exopeptidase dimerisation domain
AL539_18800	SSF46785	"Winged helix" DNA-binding domain
AL539_18800	SSF53850	Periplasmic binding protein-like II
AL539_18805	SSF56219	DNase I-like
AL539_18805	SSF74853	Lamin A/C globular tail domain
AL539_18815	SSF52374	Nucleotidylyl transferase
AL539_18820	SSF56784	HAD-like
AL539_18825	SSF55315	L30e-like
AL539_18825	SSF75217	alpha/beta knot
AL539_18830	SSF50249	Nucleic acid-binding proteins
AL539_18835	SSF46785	"Winged helix" DNA-binding domain
AL539_18840	SSF46458	Globin-like
AL539_18840	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
AL539_18840	SSF63380	Riboflavin synthase domain-like
AL539_18845	SSF81901	HCP-like
AL539_18855	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_18865	SSF117892	Band 7/SPFH domain
AL539_18870	SSF117892	Band 7/SPFH domain
AL539_18875	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_18875	SSF54980	EF-G C-terminal domain-like
AL539_18880	SSF50182	Sm-like ribonucleoproteins
AL539_18885	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_18890	SSF118116	DNA mismatch repair protein MutL
AL539_18890	SSF54211	Ribosomal protein S5 domain 2-like
AL539_18890	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
AL539_18895	SSF53187	Zn-dependent exopeptidases
AL539_18895	SSF54106	LysM domain
AL539_18900	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_18910	SSF54862	4Fe-4S ferredoxins
AL539_18975	SSF53098	Ribonuclease H-like
AL539_18980	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_18995	SSF103481	Multidrug resistance efflux transporter EmrE
AL539_19000	SSF53649	Alkaline phosphatase-like
AL539_19000	SSF64158	2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain
AL539_19005	SSF52821	Rhodanese/Cell cycle control phosphatase
AL539_19010	SSF54611	SecB-like
AL539_19015	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
AL539_19015	SSF51735	NAD(P)-binding Rossmann-fold domains
AL539_19020	SSF51161	Trimeric LpxA-like enzymes
AL539_19025	SSF51261	Duplicated hybrid motif
AL539_19030	SSF64182	DHH phosphoesterases
AL539_19035	SSF46689	Homeodomain-like
AL539_19045	SSF55681	Class II aaRS and biotin synthetases
AL539_19050	SSF46977	Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
AL539_19050	SSF51905	FAD/NAD(P)-binding domain
AL539_19050	SSF56425	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
AL539_19055	SSF46548	alpha-helical ferredoxin
AL539_19055	SSF54292	2Fe-2S ferredoxin-like
AL539_19060	SSF81343	Fumarate reductase respiratory complex transmembrane subunits
AL539_19065	SSF81343	Fumarate reductase respiratory complex transmembrane subunits
AL539_19075	SSF50104	Translation proteins SH3-like domain
AL539_19075	SSF50249	Nucleic acid-binding proteins
AL539_19080	SSF102114	Radical SAM enzymes
AL539_19095	SSF48592	GroEL equatorial domain-like
AL539_19095	SSF52029	GroEL apical domain-like
AL539_19100	SSF50129	GroES-like
AL539_19110	SSF53784	Phosphofructokinase
AL539_19115	SSF160240	Cation efflux protein cytoplasmic domain-like
AL539_19115	SSF161111	Cation efflux protein transmembrane domain-like
AL539_19125	SSF46894	C-terminal effector domain of the bipartite response regulators
AL539_19125	SSF52172	CheY-like
AL539_19130	SSF47384	Homodimeric domain of signal transducing histidine kinase
AL539_19130	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
AL539_19135	SSF46609	Fe,Mn superoxide dismutase (SOD), N-terminal domain
AL539_19135	SSF54719	Fe,Mn superoxide dismutase (SOD), C-terminal domain
AL539_19140	SSF75217	alpha/beta knot
AL539_19150	SSF48557	L-aspartase-like
AL539_19160	SSF52833	Thioredoxin-like
AL539_19160	SSF74863	Thiol:disulfide interchange protein DsbD, N-terminal domain (DsbD-alpha)
AL539_19165	SSF52172	CheY-like
AL539_19170	SSF116726	TrkA C-terminal domain-like
AL539_19170	SSF56176	FAD-binding/transporter-associated domain-like
AL539_19195	SSF48557	L-aspartase-like
AL539_19200	SSF47384	Homodimeric domain of signal transducing histidine kinase
AL539_19200	SSF52172	CheY-like
AL539_19200	SSF55785	PYP-like sensor domain (PAS domain)
AL539_19200	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
AL539_19205	SSF103473	MFS general substrate transporter
AL539_19210	SSF51206	cAMP-binding domain-like
AL539_19210	SSF54631	CBS-domain pair
AL539_19215	SSF53098	Ribonuclease H-like
AL539_19220	SSF56801	Acetyl-CoA synthetase-like
AL539_19225	SSF52304	Type II 3-dehydroquinate dehydratase
AL539_19230	SSF51230	Single hybrid motif
AL539_19235	SSF51246	Rudiment single hybrid motif
AL539_19235	SSF52440	PreATP-grasp domain
AL539_19235	SSF56059	Glutathione synthetase ATP-binding domain-like
AL539_19245	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
AL539_19250	SSF51395	FMN-linked oxidoreductases
AL539_19255	SSF46689	Homeodomain-like
AL539_19260	SSF103473	MFS general substrate transporter
AL539_19265	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_19330	SSF53383	PLP-dependent transferases
AL539_19330	SSF55904	Ornithine decarboxylase C-terminal domain
AL539_19345	SSF46894	C-terminal effector domain of the bipartite response regulators
AL539_19350	SSF46955	Putative DNA-binding domain
AL539_19360	SSF52335	Methylglyoxal synthase-like
AL539_19360	SSF53927	Cytidine deaminase-like
AL539_19365	SSF51246	Rudiment single hybrid motif
AL539_19365	SSF52440	PreATP-grasp domain
AL539_19365	SSF56059	Glutathione synthetase ATP-binding domain-like
AL539_19375	SSF47729	IHF-like DNA-binding proteins
AL539_19380	SSF54631	CBS-domain pair
AL539_19390	SSF51735	NAD(P)-binding Rossmann-fold domains
AL539_19390	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
AL539_19395	SSF52141	Uracil-DNA glycosylase-like
AL539_19400	SSF51726	UROD/MetE-like
AL539_19405	SSF55811	Nudix
AL539_19415	SSF64484	beta and beta-prime subunits of DNA dependent RNA-polymerase
AL539_19420	SSF64484	beta and beta-prime subunits of DNA dependent RNA-polymerase
AL539_19425	SSF48300	Ribosomal protein L7/12, oligomerisation (N-terminal) domain
AL539_19425	SSF54736	ClpS-like
AL539_19430	SSF160369	Ribosomal protein L10-like
AL539_19435	SSF56808	Ribosomal protein L1
AL539_19440	SSF46906	Ribosomal protein L11, C-terminal domain
AL539_19440	SSF54747	Ribosomal L11/L12e N-terminal domain
AL539_19445	SSF50104	Translation proteins SH3-like domain
AL539_19445	SSF82679	N-utilization substance G protein NusG, N-terminal domain
AL539_19460	SSF50447	Translation proteins
AL539_19460	SSF50465	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
AL539_19460	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_19485	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_19490	SSF46785	"Winged helix" DNA-binding domain
AL539_19490	SSF50037	C-terminal domain of transcriptional repressors
AL539_19490	SSF55681	Class II aaRS and biotin synthetases
AL539_19495	SSF56176	FAD-binding/transporter-associated domain-like
AL539_19495	SSF56194	Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain
AL539_19500	SSF55729	Acyl-CoA N-acyltransferases (Nat)
AL539_19505	SSF56024	Phospholipase D/nuclease
AL539_19570	SSF54928	RNA-binding domain, RBD
AL539_19575	SSF53681	Aspartate/glutamate racemase
AL539_19580	SSF52402	Adenine nucleotide alpha hydrolases-like
AL539_19585	SSF56935	Porins
AL539_19590	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
AL539_19600	SSF46689	Homeodomain-like
AL539_19605	SSF51905	FAD/NAD(P)-binding domain
AL539_19605	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
AL539_19615	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
AL539_19625	SSF46785	"Winged helix" DNA-binding domain
AL539_19625	SSF51306	LexA/Signal peptidase
AL539_19635	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
AL539_19645	SSF64288	Chorismate lyase-like
AL539_19655	SSF144091	Rhomboid-like
AL539_19660	SSF52821	Rhodanese/Cell cycle control phosphatase
AL539_19670	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
AL539_19670	SSF88946	Sigma2 domain of RNA polymerase sigma factors
AL539_19680	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_19685	SSF47364	Domain of the SRP/SRP receptor G-proteins
AL539_19685	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_19690	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
AL539_19735	SSF103473	MFS general substrate transporter
AL539_19740	SSF52799	(Phosphotyrosine protein) phosphatases II
AL539_19745	SSF51735	NAD(P)-binding Rossmann-fold domains
AL539_19745	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
AL539_19750	SSF46785	"Winged helix" DNA-binding domain
AL539_19755	SSF109604	HD-domain/PDEase-like
AL539_19755	SSF141868	EAL domain-like
AL539_19765	SSF53474	alpha/beta-Hydrolases
AL539_19770	SSF56784	HAD-like
AL539_19775	SSF88697	PUA domain-like
AL539_19790	SSF141868	EAL domain-like
AL539_19790	SSF55073	Nucleotide cyclase
AL539_19795	SSF56784	HAD-like
AL539_19800	SSF47823	lambda integrase-like, N-terminal domain
AL539_19800	SSF56349	DNA breaking-rejoining enzymes
AL539_19810	SSF54506	Diaminopimelate epimerase-like
AL539_19815	SSF50621	Alanine racemase C-terminal domain-like
AL539_19815	SSF51419	PLP-binding barrel
AL539_19825	SSF55387	Frataxin/Nqo15-like
AL539_19835	SSF53850	Periplasmic binding protein-like II
AL539_19835	SSF54782	Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain
AL539_19840	SSF69618	HemD-like
AL539_19850	SSF48452	TPR-like
AL539_19890	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
AL539_19890	SSF63380	Riboflavin synthase domain-like
AL539_19895	SSF54292	2Fe-2S ferredoxin-like
AL539_19900	SSF143968	UbiD C-terminal domain-like
AL539_19900	SSF50475	FMN-binding split barrel
AL539_19910	SSF50249	Nucleic acid-binding proteins
AL539_19910	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_19910	SSF68912	Rho N-terminal domain-like
AL539_19915	SSF52833	Thioredoxin-like
AL539_19920	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_19925	SSF109604	HD-domain/PDEase-like
AL539_19925	SSF53067	Actin-like ATPase domain
AL539_19930	SSF51735	NAD(P)-binding Rossmann-fold domains
AL539_19945	SSF47819	HRDC-like
AL539_19945	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_19950	SSF103481	Multidrug resistance efflux transporter EmrE
AL539_19955	SSF46689	Homeodomain-like
AL539_19955	SSF51215	Regulatory protein AraC
AL539_19965	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
AL539_19975	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_19985	SSF51658	Xylose isomerase-like
AL539_20005	SSF103473	MFS general substrate transporter
AL539_20010	SSF46785	"Winged helix" DNA-binding domain
AL539_20010	SSF53850	Periplasmic binding protein-like II
AL539_20015	SSF53092	Creatinase/prolidase N-terminal domain
AL539_20015	SSF55920	Creatinase/aminopeptidase
AL539_20020	SSF102114	Radical SAM enzymes
AL539_20025	SSF110399	ThiG-like
AL539_20030	SSF54285	MoaD/ThiS
AL539_20035	SSF69572	Activating enzymes of the ubiquitin-like proteins
AL539_20040	SSF51391	Thiamin phosphate synthase
AL539_20055	SSF49503	Cupredoxins
AL539_20080	SSF56672	DNA/RNA polymerases
AL539_20125	SSF56349	DNA breaking-rejoining enzymes
AL539_20185	SSF51161	Trimeric LpxA-like enzymes
AL539_20190	SSF160272	Shew3726-like
AL539_20195	SSF51735	NAD(P)-binding Rossmann-fold domains
AL539_20195	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
AL539_20200	SSF102886	Coproporphyrinogen III oxidase
AL539_20205	SSF55821	YrdC/RibB
AL539_20210	SSF52255	N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
AL539_20215	SSF51246	Rudiment single hybrid motif
AL539_20215	SSF52440	PreATP-grasp domain
AL539_20215	SSF56059	Glutathione synthetase ATP-binding domain-like
AL539_20220	SSF57783	Zinc beta-ribbon
AL539_20230	SSF102405	MCP/YpsA-like
AL539_20235	SSF54106	LysM domain
AL539_20240	SSF56420	Peptide deformylase
AL539_20245	SSF50486	FMT C-terminal domain-like
AL539_20245	SSF53328	Formyltransferase
AL539_20250	SSF48013	NusB-like
AL539_20250	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
AL539_20255	SSF116726	TrkA C-terminal domain-like
AL539_20255	SSF51735	NAD(P)-binding Rossmann-fold domains
AL539_20290	SSF54862	4Fe-4S ferredoxins
AL539_20295	SSF56112	Protein kinase-like (PK-like)
AL539_20300	SSF52833	Thioredoxin-like
AL539_20305	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
AL539_20315	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_20315	SSF54211	Ribosomal protein S5 domain 2-like
AL539_20320	SSF52467	DHS-like NAD/FAD-binding domain
AL539_20320	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
AL539_20325	SSF55021	ACT-like
AL539_20330	SSF56752	D-aminoacid aminotransferase-like PLP-dependent enzymes
AL539_20335	SSF143975	IlvD/EDD N-terminal domain-like
AL539_20335	SSF52016	LeuD/IlvD-like
AL539_20340	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
AL539_20340	SSF55021	ACT-like
AL539_20345	SSF46785	"Winged helix" DNA-binding domain
AL539_20345	SSF53850	Periplasmic binding protein-like II
AL539_20350	SSF103473	MFS general substrate transporter
AL539_20355	SSF53850	Periplasmic binding protein-like II
AL539_20360	SSF161098	MetI-like
AL539_20365	SSF51161	Trimeric LpxA-like enzymes
AL539_20365	SSF53448	Nucleotide-diphospho-sugar transferases
AL539_20370	SSF46604	Epsilon subunit of F1F0-ATP synthase C-terminal domain
AL539_20370	SSF51344	Epsilon subunit of F1F0-ATP synthase N-terminal domain
AL539_20375	SSF47917	C-terminal domain of alpha and beta subunits of F1 ATP synthase
AL539_20375	SSF50615	N-terminal domain of alpha and beta subunits of F1 ATP synthase
AL539_20375	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_20380	SSF52943	ATP synthase (F1-ATPase), gamma subunit
AL539_20385	SSF47917	C-terminal domain of alpha and beta subunits of F1 ATP synthase
AL539_20385	SSF50615	N-terminal domain of alpha and beta subunits of F1 ATP synthase
AL539_20385	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_20390	SSF47928	N-terminal domain of the delta subunit of the F1F0-ATP synthase
AL539_20395	SSF81573	F1F0 ATP synthase subunit B, membrane domain
AL539_20400	SSF81333	F1F0 ATP synthase subunit C
AL539_20405	SSF81336	F1F0 ATP synthase subunit A
AL539_20415	SSF109709	KorB DNA-binding domain-like
AL539_20415	SSF110849	ParB/Sulfiredoxin
AL539_20420	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_20425	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
AL539_20430	SSF51905	FAD/NAD(P)-binding domain
AL539_20440	SSF52218	Flavoproteins
AL539_20445	SSF116878	TrmE connector domain
AL539_20445	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_20460	SSF54211	Ribosomal protein S5 domain 2-like
AL539_20470	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_20475	SSF161098	MetI-like
AL539_20480	SSF53850	Periplasmic binding protein-like II
AL539_20490	SSF48295	TrpR-like
AL539_20490	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_20495	SSF55979	DNA clamp
AL539_20500	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_20505	SSF54211	Ribosomal protein S5 domain 2-like
AL539_20505	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
AL539_20505	SSF56719	Type II DNA topoisomerase
AL539_20515	SSF54534	FKBP-like
AL539_20525	SSF49764	HSP20-like chaperones
AL539_20530	SSF53383	PLP-dependent transferases
AL539_20535	SSF51445	(Trans)glycosidases
AL539_20540	SSF109604	HD-domain/PDEase-like
AL539_20545	SSF55681	Class II aaRS and biotin synthetases
AL539_20560	SSF64307	SirA-like
AL539_20570	SSF46785	"Winged helix" DNA-binding domain
AL539_20570	SSF53850	Periplasmic binding protein-like II
AL539_20575	SSF50129	GroES-like
AL539_20575	SSF51735	NAD(P)-binding Rossmann-fold domains
AL539_20580	SSF53901	Thiolase-like
AL539_20585	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
AL539_20585	SSF51735	NAD(P)-binding Rossmann-fold domains
AL539_20585	SSF52096	ClpP/crotonase
AL539_20590	SSF54211	Ribosomal protein S5 domain 2-like
AL539_20590	SSF54980	EF-G C-terminal domain-like
AL539_20600	SSF52218	Flavoproteins
AL539_20640	SSF46785	"Winged helix" DNA-binding domain
AL539_20640	SSF53850	Periplasmic binding protein-like II
AL539_20645	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
AL539_20645	SSF51735	NAD(P)-binding Rossmann-fold domains
AL539_20655	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
AL539_20655	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
AL539_20655	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
AL539_20660	SSF111369	HlyD-like secretion proteins
AL539_20665	SSF46689	Homeodomain-like
AL539_20670	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_20675	SSF46626	Cytochrome c
AL539_20705	SSF56784	HAD-like
AL539_20715	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_20720	SSF53850	Periplasmic binding protein-like II
AL539_20725	SSF161098	MetI-like
AL539_20730	SSF161098	MetI-like
AL539_20745	SSF47413	lambda repressor-like DNA-binding domains
AL539_20745	SSF53822	Periplasmic binding protein-like I
AL539_20750	SSF46785	"Winged helix" DNA-binding domain
AL539_20750	SSF53850	Periplasmic binding protein-like II
AL539_20755	SSF103481	Multidrug resistance efflux transporter EmrE
AL539_20760	SSF103481	Multidrug resistance efflux transporter EmrE
AL539_20765	SSF143975	IlvD/EDD N-terminal domain-like
AL539_20765	SSF52016	LeuD/IlvD-like
AL539_20770	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_20780	SSF51569	Aldolase
AL539_20785	SSF53167	Purine and uridine phosphorylases
AL539_20790	SSF46785	"Winged helix" DNA-binding domain
AL539_20790	SSF53850	Periplasmic binding protein-like II
AL539_20795	SSF51905	FAD/NAD(P)-binding domain
AL539_20795	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
AL539_20800	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
AL539_20805	SSF55486	Metalloproteases ("zincins"), catalytic domain
AL539_20810	SSF46785	"Winged helix" DNA-binding domain
AL539_20810	SSF54909	Dimeric alpha+beta barrel
AL539_20815	SSF141868	EAL domain-like
AL539_20815	SSF55073	Nucleotide cyclase
AL539_20815	SSF55785	PYP-like sensor domain (PAS domain)
AL539_20820	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
AL539_20830	SSF103481	Multidrug resistance efflux transporter EmrE
AL539_20835	SSF52402	Adenine nucleotide alpha hydrolases-like
AL539_20840	SSF47240	Ferritin-like
AL539_20850	SSF160996	HI0933 insert domain-like
AL539_20850	SSF51905	FAD/NAD(P)-binding domain
AL539_20855	SSF46689	Homeodomain-like
AL539_20855	SSF52172	CheY-like
AL539_20855	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_20880	SSF111331	NAD kinase/diacylglycerol kinase-like
AL539_20880	SSF52799	(Phosphotyrosine protein) phosphatases II
AL539_20915	SSF141868	EAL domain-like
AL539_20915	SSF55073	Nucleotide cyclase
AL539_20915	SSF55785	PYP-like sensor domain (PAS domain)
AL539_20920	SSF103481	Multidrug resistance efflux transporter EmrE
AL539_20930	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
AL539_20935	SSF55718	SCP-like
AL539_20940	SSF56112	Protein kinase-like (PK-like)
AL539_20970	SSF51556	Metallo-dependent hydrolases
AL539_20980	SSF51569	Aldolase
AL539_20985	SSF55729	Acyl-CoA N-acyltransferases (Nat)
AL539_20995	SSF47807	5' to 3' exonuclease, C-terminal subdomain
AL539_20995	SSF53098	Ribonuclease H-like
AL539_20995	SSF56672	DNA/RNA polymerases
AL539_20995	SSF88723	PIN domain-like
AL539_21000	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_21005	SSF46626	Cytochrome c
AL539_21015	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
AL539_21030	SSF102114	Radical SAM enzymes
AL539_21035	SSF51556	Metallo-dependent hydrolases
AL539_21040	SSF141868	EAL domain-like
AL539_21040	SSF158472	HAMP domain-like
AL539_21040	SSF55073	Nucleotide cyclase
AL539_21045	SSF46689	Homeodomain-like
AL539_21045	SSF52172	CheY-like
AL539_21045	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_21050	SSF47384	Homodimeric domain of signal transducing histidine kinase
AL539_21050	SSF55785	PYP-like sensor domain (PAS domain)
AL539_21050	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
AL539_21060	SSF54368	Glutamine synthetase, N-terminal domain
AL539_21060	SSF55931	Glutamine synthetase/guanido kinase
AL539_21065	SSF50447	Translation proteins
AL539_21065	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_21065	SSF54980	EF-G C-terminal domain-like
AL539_21070	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_21085	SSF69500	DTD-like
AL539_21090	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
AL539_21090	SSF55729	Acyl-CoA N-acyltransferases (Nat)
AL539_21100	SSF53795	PEP carboxykinase-like
AL539_21100	SSF68923	PEP carboxykinase N-terminal domain
AL539_21105	SSF118352	HSP33 redox switch-like
AL539_21105	SSF64397	Hsp33 domain
AL539_21110	SSF55174	Alpha-L RNA-binding motif
AL539_21115	SSF50156	PDZ domain-like
AL539_21125	SSF160246	EspE N-terminal domain-like
AL539_21125	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_21135	SSF54523	Pili subunits
AL539_21140	SSF54523	Pili subunits
AL539_21145	SSF54523	Pili subunits
AL539_21150	SSF54523	Pili subunits
AL539_21155	SSF158544	GspK insert domain-like
AL539_21155	SSF54523	Pili subunits
AL539_21160	SSF53067	Actin-like ATPase domain
AL539_21165	SSF103054	General secretion pathway protein M, EpsM
AL539_21175	SSF56655	Carbohydrate phosphatase
AL539_21180	SSF55811	Nudix
AL539_21185	SSF117916	Fe-S cluster assembly (FSCA) domain-like
AL539_21185	SSF89360	HesB-like domain
AL539_21190	SSF53271	PRTase-like
AL539_21195	SSF53474	alpha/beta-Hydrolases
AL539_21205	SSF158832	Tex N-terminal region-like
AL539_21205	SSF47781	RuvA domain 2-like
AL539_21205	SSF50249	Nucleic acid-binding proteins
AL539_21205	SSF53098	Ribonuclease H-like
AL539_21210	SSF50630	Acid proteases
AL539_21215	SSF46557	GreA transcript cleavage protein, N-terminal domain
AL539_21215	SSF54534	FKBP-like
AL539_21225	SSF46894	C-terminal effector domain of the bipartite response regulators
AL539_21225	SSF52172	CheY-like
AL539_21230	SSF47384	Homodimeric domain of signal transducing histidine kinase
AL539_21230	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
AL539_21240	SSF50249	Nucleic acid-binding proteins
AL539_21240	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_21245	SSF75217	alpha/beta knot
AL539_21250	SSF109604	HD-domain/PDEase-like
AL539_21250	SSF55021	ACT-like
AL539_21250	SSF81271	TGS-like
AL539_21250	SSF81301	Nucleotidyltransferase
AL539_21255	SSF63562	RPB6/omega subunit-like
AL539_21260	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_21270	SSF48452	TPR-like
AL539_21275	SSF74653	TolA/TonB C-terminal domain
AL539_21300	SSF56935	Porins
AL539_21310	SSF161098	MetI-like
AL539_21315	SSF161098	MetI-like
AL539_21320	SSF53850	Periplasmic binding protein-like II
AL539_21325	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_21330	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_21350	SSF54211	Ribosomal protein S5 domain 2-like
AL539_21350	SSF55666	Ribonuclease PH domain 2-like
AL539_21355	SSF53271	PRTase-like
AL539_21365	SSF46689	Homeodomain-like
AL539_21365	SSF48498	Tetracyclin repressor-like, C-terminal domain
AL539_21370	SSF102645	CoaB-like
AL539_21370	SSF52507	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
AL539_21380	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
AL539_21385	SSF102712	JAB1/MPN domain
AL539_21385	SSF47781	RuvA domain 2-like
AL539_21390	SSF143800	L28p-like
AL539_21395	SSF57829	Zn-binding ribosomal proteins
AL539_21405	SSF46946	S13-like H2TH domain
AL539_21405	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
AL539_21405	SSF81624	N-terminal domain of MutM-like DNA repair proteins
AL539_21415	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
AL539_21420	SSF52374	Nucleotidylyl transferase
AL539_21430	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
AL539_21435	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
AL539_21445	SSF56112	Protein kinase-like (PK-like)
AL539_21450	SSF51735	NAD(P)-binding Rossmann-fold domains
AL539_21455	SSF53448	Nucleotide-diphospho-sugar transferases
AL539_21460	SSF51735	NAD(P)-binding Rossmann-fold domains
AL539_21465	SSF51182	RmlC-like cupins
AL539_21470	SSF53383	PLP-dependent transferases
AL539_21480	SSF51161	Trimeric LpxA-like enzymes
AL539_21485	SSF53448	Nucleotide-diphospho-sugar transferases
AL539_21490	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
AL539_21495	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
AL539_21505	SSF51735	NAD(P)-binding Rossmann-fold domains
AL539_21520	SSF159270	YmcC-like
AL539_21530	SSF56925	OMPA-like
AL539_21535	SSF142984	Nqo1 middle domain-like
AL539_21545	SSF51735	NAD(P)-binding Rossmann-fold domains
AL539_21550	SSF53448	Nucleotide-diphospho-sugar transferases
AL539_21555	SSF51735	NAD(P)-binding Rossmann-fold domains
AL539_21560	SSF51182	RmlC-like cupins
AL539_21565	SSF52374	Nucleotidylyl transferase
AL539_21575	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
AL539_21585	SSF53448	Nucleotide-diphospho-sugar transferases
AL539_21590	SSF53448	Nucleotide-diphospho-sugar transferases
AL539_21595	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
AL539_21605	SSF51161	Trimeric LpxA-like enzymes
AL539_21610	SSF53383	PLP-dependent transferases
AL539_21615	SSF51735	NAD(P)-binding Rossmann-fold domains
AL539_21620	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
AL539_21620	SSF51735	NAD(P)-binding Rossmann-fold domains
AL539_21620	SSF52413	UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
AL539_21625	SSF56281	Metallo-hydrolase/oxidoreductase
AL539_21630	SSF53098	Ribonuclease H-like
AL539_21635	SSF51351	Triosephosphate isomerase (TIM)
AL539_21640	SSF55331	Tautomerase/MIF
AL539_21655	SSF46785	"Winged helix" DNA-binding domain
AL539_21660	SSF56655	Carbohydrate phosphatase
AL539_21670	SSF89562	RraA-like
AL539_21705	SSF102712	JAB1/MPN domain
AL539_21715	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_21720	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
AL539_21725	SSF110997	Sporulation related repeat
AL539_21730	SSF47413	lambda repressor-like DNA-binding domains
AL539_21730	SSF53822	Periplasmic binding protein-like I
AL539_21735	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_21745	SSF143800	L28p-like
AL539_21750	SSF54999	Ribosomal protein S10
AL539_21755	SSF50447	Translation proteins
AL539_21760	SSF52166	Ribosomal protein L4
AL539_21765	SSF54189	Ribosomal proteins S24e, L23 and L15e
AL539_21770	SSF50104	Translation proteins SH3-like domain
AL539_21770	SSF50249	Nucleic acid-binding proteins
AL539_21775	SSF54570	Ribosomal protein S19
AL539_21780	SSF54843	Ribosomal protein L22
AL539_21785	SSF54814	Prokaryotic type KH domain (KH-domain type II)
AL539_21785	SSF54821	Ribosomal protein S3 C-terminal domain
AL539_21790	SSF54686	Ribosomal protein L16p/L10e
AL539_21795	SSF46561	Ribosomal protein L29 (L29p)
AL539_21800	SSF50249	Nucleic acid-binding proteins
AL539_21805	SSF50193	Ribosomal protein L14
AL539_21810	SSF50104	Translation proteins SH3-like domain
AL539_21815	SSF55282	RL5-like
AL539_21820	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
AL539_21825	SSF56047	Ribosomal protein S8
AL539_21830	SSF56053	Ribosomal protein L6
AL539_21835	SSF53137	Translational machinery components
AL539_21840	SSF54211	Ribosomal protein S5 domain 2-like
AL539_21840	SSF54768	dsRNA-binding domain-like
AL539_21845	SSF55129	Ribosomal protein L30p/L7e
AL539_21850	SSF52080	Ribosomal proteins L15p and L18e
AL539_21855	SSF103491	Preprotein translocase SecY subunit
AL539_21860	SSF57840	Ribosomal protein L36
AL539_21865	SSF46946	S13-like H2TH domain
AL539_21870	SSF53137	Translational machinery components
AL539_21875	SSF55174	Alpha-L RNA-binding motif
AL539_21880	SSF47789	C-terminal domain of RNA polymerase alpha subunit
AL539_21880	SSF55257	RBP11-like subunits of RNA polymerase
AL539_21880	SSF56553	Insert subdomain of RNA polymerase alpha subunit
AL539_21885	SSF64263	Prokaryotic ribosomal protein L17
AL539_21895	SSF54534	FKBP-like
AL539_21905	SSF55729	Acyl-CoA N-acyltransferases (Nat)
AL539_21910	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_21915	SSF51206	cAMP-binding domain-like
AL539_21920	SSF55816	5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain
AL539_21920	SSF56300	Metallo-dependent phosphatases
AL539_21925	SSF53790	Tetrapyrrole methylase
AL539_21930	SSF52402	Adenine nucleotide alpha hydrolases-like
AL539_21935	SSF50447	Translation proteins
AL539_21935	SSF50465	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
AL539_21935	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_21940	SSF116726	TrkA C-terminal domain-like
AL539_21945	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_21965	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_21990	SSF55068	Peptide methionine sulfoxide reductase
AL539_22005	SSF110857	Gamma-glutamyl cyclotransferase-like
AL539_22025	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
AL539_22040	SSF56935	Porins
AL539_22045	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
AL539_22060	SSF50324	Inorganic pyrophosphatase
AL539_22065	SSF56655	Carbohydrate phosphatase
AL539_22075	SSF51984	MurCD N-terminal domain
AL539_22075	SSF53244	MurD-like peptide ligases, peptide-binding domain
AL539_22075	SSF53623	MurD-like peptide ligases, catalytic domain
AL539_22080	SSF52507	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
AL539_22085	SSF53850	Periplasmic binding protein-like II
AL539_22090	SSF161098	MetI-like
AL539_22095	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_22100	SSF46785	"Winged helix" DNA-binding domain
AL539_22100	SSF53850	Periplasmic binding protein-like II
AL539_22105	SSF51395	FMN-linked oxidoreductases
AL539_22110	SSF52402	Adenine nucleotide alpha hydrolases-like
AL539_22125	SSF53850	Periplasmic binding protein-like II
AL539_22135	SSF46785	"Winged helix" DNA-binding domain
AL539_22135	SSF55252	C-terminal domain of arginine repressor
AL539_22140	SSF51735	NAD(P)-binding Rossmann-fold domains
AL539_22140	SSF56327	LDH C-terminal domain-like
AL539_22150	SSF48576	Terpenoid synthases
AL539_22155	SSF141091	L21p-like
AL539_22160	SSF110324	Ribosomal L27 protein-like
AL539_22165	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_22165	SSF82051	Obg GTP-binding protein N-terminal domain
AL539_22180	SSF53597	Dihydrofolate reductase-like
AL539_22185	SSF56300	Metallo-dependent phosphatases
AL539_22190	SSF110069	ApaG-like
AL539_22195	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
AL539_22200	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
AL539_22205	SSF109998	Triger factor/SurA peptide-binding domain-like
AL539_22205	SSF54534	FKBP-like
AL539_22215	SSF158682	TerB-like
AL539_22215	SSF46565	Chaperone J-domain
AL539_22225	SSF52016	LeuD/IlvD-like
AL539_22230	SSF53732	Aconitase iron-sulfur domain
AL539_22235	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
AL539_22240	SSF110921	2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain
AL539_22240	SSF51569	Aldolase
AL539_22255	SSF48317	Acid phosphatase/Vanadium-dependent haloperoxidase
AL539_22260	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
AL539_22265	SSF46785	"Winged helix" DNA-binding domain
AL539_22265	SSF53850	Periplasmic binding protein-like II
AL539_22270	SSF56801	Acetyl-CoA synthetase-like
AL539_22275	SSF52467	DHS-like NAD/FAD-binding domain
AL539_22275	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
AL539_22280	SSF55021	ACT-like
AL539_22285	SSF103190	Sensory domain-like
AL539_22285	SSF55073	Nucleotide cyclase
AL539_22285	SSF55785	PYP-like sensor domain (PAS domain)
AL539_22290	SSF46785	"Winged helix" DNA-binding domain
AL539_22290	SSF48008	GntR ligand-binding domain-like
AL539_22295	SSF50800	PK beta-barrel domain-like
AL539_22295	SSF51621	Phosphoenolpyruvate/pyruvate domain
AL539_22295	SSF52935	PK C-terminal domain-like
AL539_22300	SSF100950	NagB/RpiA/CoA transferase-like
AL539_22300	SSF46785	"Winged helix" DNA-binding domain
AL539_22305	SSF53697	SIS domain
AL539_22305	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
AL539_22310	SSF46785	"Winged helix" DNA-binding domain
AL539_22310	SSF52980	Restriction endonuclease-like
AL539_22315	SSF53098	Ribonuclease H-like
AL539_22320	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_22335	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
AL539_22340	SSF116734	DNA methylase specificity domain
AL539_22345	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_22360	SSF56796	Dehydroquinate synthase-like
AL539_22365	SSF82549	DAK1/DegV-like
AL539_22370	SSF101473	DhaL-like
AL539_22375	SSF47831	Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain
AL539_22375	SSF51621	Phosphoenolpyruvate/pyruvate domain
AL539_22375	SSF52009	Phosphohistidine domain
AL539_22375	SSF53062	PTS system fructose IIA component-like
AL539_22375	SSF55594	HPr-like
AL539_22380	SSF46689	Homeodomain-like
AL539_22380	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_22380	SSF55785	PYP-like sensor domain (PAS domain)
AL539_22385	SSF158668	MtlR-like
AL539_22390	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
AL539_22390	SSF51735	NAD(P)-binding Rossmann-fold domains
AL539_22395	SSF52794	PTS system IIB component-like
AL539_22395	SSF55804	Phoshotransferase/anion transport protein
AL539_22400	SSF55729	Acyl-CoA N-acyltransferases (Nat)
AL539_22400	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
AL539_22415	SSF53850	Periplasmic binding protein-like II
AL539_22420	SSF56349	DNA breaking-rejoining enzymes
AL539_22430	SSF46785	"Winged helix" DNA-binding domain
AL539_22435	SSF50249	Nucleic acid-binding proteins
AL539_22450	SSF50249	Nucleic acid-binding proteins
AL539_22465	SSF56300	Metallo-dependent phosphatases
AL539_22475	SSF46955	Putative DNA-binding domain
AL539_22480	SSF52980	Restriction endonuclease-like
AL539_22480	SSF57783	Zinc beta-ribbon
AL539_22485	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_22490	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_22515	SSF47413	lambda repressor-like DNA-binding domains
AL539_22525	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
AL539_22525	SSF88946	Sigma2 domain of RNA polymerase sigma factors
AL539_22530	SSF117023	DNA primase DnaG, C-terminal domain
AL539_22530	SSF56731	DNA primase core
AL539_22530	SSF57783	Zinc beta-ribbon
AL539_22535	SSF89095	GatB/YqeY motif
AL539_22545	SSF53067	Actin-like ATPase domain
AL539_22550	SSF53474	alpha/beta-Hydrolases
AL539_22560	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
AL539_22565	SSF55083	6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK
AL539_22575	SSF81301	Nucleotidyltransferase
AL539_22575	SSF81891	Poly A polymerase C-terminal region-like
AL539_22580	SSF47090	PGBD-like
AL539_22580	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_22590	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
AL539_22605	SSF109755	PhoU-like
AL539_22610	SSF55154	CYTH-like phosphatases
AL539_22615	SSF81324	Voltage-gated potassium channels
AL539_22620	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
AL539_22625	SSF81301	Nucleotidyltransferase
AL539_22625	SSF81593	Nucleotidyltransferase substrate binding subunit/domain
AL539_22630	SSF52374	Nucleotidylyl transferase
AL539_22630	SSF53613	Ribokinase-like
AL539_22635	SSF56954	Outer membrane efflux proteins (OEP)
AL539_22640	SSF55811	Nudix
AL539_22650	SSF56300	Metallo-dependent phosphatases
AL539_22655	SSF53474	alpha/beta-Hydrolases
AL539_22660	SSF54211	Ribosomal protein S5 domain 2-like
AL539_22660	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
AL539_22660	SSF56719	Type II DNA topoisomerase
AL539_22665	SSF101904	GyrA/ParC C-terminal domain-like
AL539_22665	SSF56719	Type II DNA topoisomerase
AL539_22670	SSF50156	PDZ domain-like
AL539_22670	SSF50494	Trypsin-like serine proteases
AL539_22675	SSF50156	PDZ domain-like
AL539_22675	SSF50494	Trypsin-like serine proteases
AL539_22690	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_22700	SSF52161	Ribosomal protein L13
AL539_22705	SSF54211	Ribosomal protein S5 domain 2-like
AL539_22710	SSF50022	ISP domain
AL539_22715	SSF81342	Transmembrane di-heme cytochromes
AL539_22715	SSF81648	a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
AL539_22720	SSF46626	Cytochrome c
AL539_22725	SSF47616	GST C-terminal domain-like
AL539_22725	SSF52833	Thioredoxin-like
AL539_22730	SSF101738	SspB-like
AL539_22740	SSF53697	SIS domain
AL539_22745	SSF52980	Restriction endonuclease-like
AL539_22750	SSF53822	Periplasmic binding protein-like I
AL539_22755	SSF53790	Tetrapyrrole methylase
AL539_22770	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
AL539_22770	SSF81799	Putative methyltransferase TM0872, insert domain
AL539_22780	SSF56519	Penicillin binding protein dimerisation domain
AL539_22780	SSF56601	beta-lactamase/transpeptidase-like
AL539_22785	SSF53244	MurD-like peptide ligases, peptide-binding domain
AL539_22785	SSF53623	MurD-like peptide ligases, catalytic domain
AL539_22785	SSF63418	MurE/MurF N-terminal domain
AL539_22790	SSF53244	MurD-like peptide ligases, peptide-binding domain
AL539_22790	SSF53623	MurD-like peptide ligases, catalytic domain
AL539_22790	SSF63418	MurE/MurF N-terminal domain
AL539_22800	SSF51984	MurCD N-terminal domain
AL539_22800	SSF53244	MurD-like peptide ligases, peptide-binding domain
AL539_22800	SSF53623	MurD-like peptide ligases, catalytic domain
AL539_22810	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
AL539_22815	SSF51984	MurCD N-terminal domain
AL539_22815	SSF53244	MurD-like peptide ligases, peptide-binding domain
AL539_22815	SSF53623	MurD-like peptide ligases, catalytic domain
AL539_22825	SSF53067	Actin-like ATPase domain
AL539_22830	SSF52490	Tubulin nucleotide-binding domain-like
AL539_22830	SSF55307	Tubulin C-terminal domain-like
AL539_22835	SSF54211	Ribosomal protein S5 domain 2-like
AL539_22845	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_22845	SSF81767	Pre-protein crosslinking domain of SecA
AL539_22845	SSF81886	Helical scaffold and wing domains of SecA
AL539_22850	SSF55811	Nudix
AL539_22855	SSF51735	NAD(P)-binding Rossmann-fold domains
AL539_22855	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
AL539_22860	SSF52021	Carbamoyl phosphate synthetase, small subunit N-terminal domain
AL539_22860	SSF52317	Class I glutamine amidotransferase-like
AL539_22865	SSF48108	Carbamoyl phosphate synthetase, large subunit connection domain
AL539_22865	SSF52335	Methylglyoxal synthase-like
AL539_22865	SSF52440	PreATP-grasp domain
AL539_22865	SSF56059	Glutathione synthetase ATP-binding domain-like
AL539_22885	SSF46785	"Winged helix" DNA-binding domain
AL539_22885	SSF53850	Periplasmic binding protein-like II
AL539_22895	SSF53807	"Helical backbone" metal receptor
AL539_22905	SSF53167	Purine and uridine phosphorylases
AL539_22915	SSF46548	alpha-helical ferredoxin
AL539_22915	SSF51971	Nucleotide-binding domain
AL539_22920	SSF51395	FMN-linked oxidoreductases
AL539_22920	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
AL539_22920	SSF69336	Alpha subunit of glutamate synthase, C-terminal domain
AL539_22925	SSF46548	alpha-helical ferredoxin
AL539_22925	SSF51971	Nucleotide-binding domain
AL539_22930	SSF51395	FMN-linked oxidoreductases
AL539_22930	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
AL539_22930	SSF69336	Alpha subunit of glutamate synthase, C-terminal domain
AL539_22935	SSF102114	Radical SAM enzymes
AL539_22940	SSF55073	Nucleotide cyclase
AL539_22940	SSF55785	PYP-like sensor domain (PAS domain)
AL539_22945	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
AL539_22945	SSF47384	Homodimeric domain of signal transducing histidine kinase
AL539_22945	SSF52172	CheY-like
AL539_22945	SSF55785	PYP-like sensor domain (PAS domain)
AL539_22945	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
AL539_22955	SSF46894	C-terminal effector domain of the bipartite response regulators
AL539_22955	SSF52172	CheY-like
AL539_22970	SSF89562	RraA-like
AL539_22975	SSF56935	Porins
AL539_22985	SSF51735	NAD(P)-binding Rossmann-fold domains
AL539_22985	SSF53633	Carbamate kinase-like
AL539_22985	SSF55021	ACT-like
AL539_22985	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
AL539_22990	SSF54211	Ribosomal protein S5 domain 2-like
AL539_22990	SSF55060	GHMP Kinase, C-terminal domain
AL539_22995	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
AL539_23000	SSF52218	Flavoproteins
AL539_23005	SSF51998	PFL-like glycyl radical enzymes
AL539_23010	SSF51658	Xylose isomerase-like
AL539_23020	SSF52141	Uracil-DNA glycosylase-like
AL539_23045	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_23050	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
AL539_23060	SSF52218	Flavoproteins
AL539_23065	SSF47823	lambda integrase-like, N-terminal domain
AL539_23065	SSF56349	DNA breaking-rejoining enzymes
AL539_23070	SSF52833	Thioredoxin-like
AL539_23070	SSF54423	DsbC/DsbG N-terminal domain-like
AL539_23075	SSF64182	DHH phosphoesterases
AL539_23085	SSF50249	Nucleic acid-binding proteins
AL539_23085	SSF55681	Class II aaRS and biotin synthetases
AL539_23090	SSF46689	Homeodomain-like
AL539_23090	SSF52172	CheY-like
AL539_23090	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_23100	SSF51430	NAD(P)-linked oxidoreductase
AL539_23110	SSF52980	Restriction endonuclease-like
AL539_23115	SSF55811	Nudix
AL539_23120	SSF47831	Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain
AL539_23120	SSF51621	Phosphoenolpyruvate/pyruvate domain
AL539_23120	SSF52009	Phosphohistidine domain
AL539_23120	SSF55781	GAF domain-like
AL539_23135	SSF55831	Thymidylate synthase/dCMP hydroxymethylase
AL539_23150	SSF46785	"Winged helix" DNA-binding domain
AL539_23150	SSF53850	Periplasmic binding protein-like II
AL539_23155	SSF46785	"Winged helix" DNA-binding domain
AL539_23160	SSF46992	Ribosomal protein S20
AL539_23170	SSF52374	Nucleotidylyl transferase
AL539_23170	SSF82114	Riboflavin kinase-like
AL539_23175	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
AL539_23175	SSF50677	ValRS/IleRS/LeuRS editing domain
AL539_23175	SSF52374	Nucleotidylyl transferase
AL539_23185	SSF54534	FKBP-like
AL539_23195	SSF52788	Phosphotyrosine protein phosphatases I
AL539_23200	SSF52172	CheY-like
AL539_23205	SSF55781	GAF domain-like
AL539_23205	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
AL539_23220	SSF54403	Cystatin/monellin
AL539_23225	SSF53697	SIS domain
AL539_23230	SSF53067	Actin-like ATPase domain
AL539_23235	SSF51445	(Trans)glycosidases
AL539_23240	SSF51569	Aldolase
AL539_23245	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
AL539_23245	SSF48600	Chorismate mutase II
AL539_23245	SSF51735	NAD(P)-binding Rossmann-fold domains
AL539_23250	SSF51261	Duplicated hybrid motif
AL539_23255	SSF141371	PilZ domain-like
AL539_23260	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_23265	SSF48435	Bacterial muramidases
AL539_23265	SSF53955	Lysozyme-like
AL539_23270	SSF48295	TrpR-like
AL539_23275	SSF52972	ITPase-like
AL539_23280	SSF48600	Chorismate mutase II
AL539_23280	SSF53850	Periplasmic binding protein-like II
AL539_23280	SSF55021	ACT-like
AL539_23285	SSF69754	Ribosome binding protein Y (YfiA homologue)
AL539_23290	SSF53850	Periplasmic binding protein-like II
AL539_23290	SSF53955	Lysozyme-like
AL539_23295	SSF48452	TPR-like
AL539_23300	SSF55120	Pseudouridine synthase
AL539_23300	SSF55174	Alpha-L RNA-binding motif
AL539_23305	SSF64438	CNF1/YfiH-like putative cysteine hydrolases
AL539_23310	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_23310	SSF81923	Double Clp-N motif
AL539_23355	SSF55331	Tautomerase/MIF
AL539_23360	SSF55166	Hedgehog/DD-peptidase
AL539_23375	SSF54862	4Fe-4S ferredoxins
AL539_23395	SSF52172	CheY-like
AL539_23400	SSF47384	Homodimeric domain of signal transducing histidine kinase
AL539_23400	SSF55785	PYP-like sensor domain (PAS domain)
AL539_23400	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
AL539_23405	SSF53850	Periplasmic binding protein-like II
AL539_23410	SSF109604	HD-domain/PDEase-like
AL539_23410	SSF53067	Actin-like ATPase domain
AL539_23415	SSF140356	PPK N-terminal domain-like
AL539_23415	SSF143724	PHP14-like
AL539_23415	SSF56024	Phospholipase D/nuclease
AL539_23420	SSF161098	MetI-like
AL539_23425	SSF161098	MetI-like
AL539_23430	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_23435	SSF109755	PhoU-like
AL539_23440	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_23445	SSF110395	CutC-like
AL539_23450	SSF52833	Thioredoxin-like
AL539_23455	SSF46785	"Winged helix" DNA-binding domain
AL539_23455	SSF53850	Periplasmic binding protein-like II
AL539_23460	SSF51645	Malate synthase G
AL539_23465	SSF51621	Phosphoenolpyruvate/pyruvate domain
AL539_23470	SSF54631	CBS-domain pair
AL539_23475	SSF50494	Trypsin-like serine proteases
AL539_23480	SSF111337	QueA-like
AL539_23485	SSF51713	tRNA-guanine transglycosylase
AL539_23495	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
AL539_23500	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
AL539_23515	SSF56655	Carbohydrate phosphatase
AL539_23520	SSF75217	alpha/beta knot
AL539_23525	SSF46785	"Winged helix" DNA-binding domain
AL539_23530	SSF53383	PLP-dependent transferases
AL539_23535	SSF82649	SufE/NifU
AL539_23540	SSF89360	HesB-like domain
AL539_23545	SSF46565	Chaperone J-domain
AL539_23545	SSF47144	HSC20 (HSCB), C-terminal oligomerisation domain
AL539_23550	SSF100920	Heat shock protein 70kD (HSP70), peptide-binding domain
AL539_23550	SSF100934	Heat shock protein 70kD (HSP70), C-terminal subdomain
AL539_23550	SSF53067	Actin-like ATPase domain
AL539_23555	SSF54292	2Fe-2S ferredoxin-like
AL539_23560	SSF140319	IscX-like
AL539_23565	SSF53187	Zn-dependent exopeptidases
AL539_23570	SSF54919	Nucleoside diphosphate kinase, NDK
AL539_23575	SSF102114	Radical SAM enzymes
AL539_23580	SSF47413	lambda repressor-like DNA-binding domains
AL539_23585	SSF51717	Dihydropteroate synthetase-like
AL539_23585	SSF56014	Nitrite and sulphite reductase 4Fe-4S domain-like
AL539_23590	SSF52954	Class II aaRS ABD-related
AL539_23590	SSF55681	Class II aaRS and biotin synthetases
AL539_23595	SSF48452	TPR-like
AL539_23600	SSF50998	Quinoprotein alcohol dehydrogenase-like
AL539_23605	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_23610	SSF55186	ThrRS/AlaRS common domain
AL539_23615	SSF161187	YfgJ-like
AL539_23625	SSF51412	Inosine monophosphate dehydrogenase (IMPDH)
AL539_23625	SSF54631	CBS-domain pair
AL539_23630	SSF52317	Class I glutamine amidotransferase-like
AL539_23630	SSF52402	Adenine nucleotide alpha hydrolases-like
AL539_23630	SSF54810	GMP synthetase C-terminal dimerisation domain
AL539_23640	SSF51055	Carbohydrate binding domain
AL539_23640	SSF53955	Lysozyme-like
AL539_23655	SSF51905	FAD/NAD(P)-binding domain
AL539_23655	SSF54373	FAD-linked reductases, C-terminal domain
AL539_23660	SSF46785	"Winged helix" DNA-binding domain
AL539_23660	SSF53850	Periplasmic binding protein-like II
AL539_23665	SSF53383	PLP-dependent transferases
AL539_23670	SSF53383	PLP-dependent transferases
AL539_23690	SSF55729	Acyl-CoA N-acyltransferases (Nat)
AL539_23690	SSF56317	Carbon-nitrogen hydrolase
AL539_23695	SSF46785	"Winged helix" DNA-binding domain
AL539_23695	SSF53850	Periplasmic binding protein-like II
AL539_23700	SSF56925	OMPA-like
AL539_23705	SSF53474	alpha/beta-Hydrolases
AL539_23725	SSF56300	Metallo-dependent phosphatases
AL539_23730	SSF46785	"Winged helix" DNA-binding domain
AL539_23740	SSF141868	EAL domain-like
AL539_23745	SSF141868	EAL domain-like
AL539_23745	SSF55073	Nucleotide cyclase
AL539_23750	SSF46689	Homeodomain-like
AL539_23750	SSF51215	Regulatory protein AraC
AL539_23755	SSF141868	EAL domain-like
AL539_23770	SSF53098	Ribonuclease H-like
AL539_23775	SSF55073	Nucleotide cyclase
AL539_23780	SSF47413	lambda repressor-like DNA-binding domains
AL539_23780	SSF51182	RmlC-like cupins
AL539_23785	SSF56037	PheT/TilS domain
AL539_23795	SSF56349	DNA breaking-rejoining enzymes
AL539_23820	SSF56300	Metallo-dependent phosphatases
AL539_23875	SSF53041	Resolvase-like
AL539_23885	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_23890	SSF116734	DNA methylase specificity domain
AL539_23895	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
AL539_23905	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
AL539_23910	SSF116734	DNA methylase specificity domain
AL539_23915	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_23930	SSF56349	DNA breaking-rejoining enzymes
AL539_23940	SSF74982	Small protein B (SmpB)
AL539_23945	SSF55961	Bet v1-like
AL539_23950	SSF54285	MoaD/ThiS
AL539_23960	SSF55729	Acyl-CoA N-acyltransferases (Nat)
AL539_23965	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_23975	SSF111331	NAD kinase/diacylglycerol kinase-like
AL539_23980	SSF51064	Head domain of nucleotide exchange factor GrpE
AL539_23980	SSF58014	Coiled-coil domain of nucleotide exchange factor GrpE
AL539_23985	SSF118215	Proton glutamate symport protein
AL539_23990	SSF100920	Heat shock protein 70kD (HSP70), peptide-binding domain
AL539_23990	SSF100934	Heat shock protein 70kD (HSP70), C-terminal subdomain
AL539_23990	SSF53067	Actin-like ATPase domain
AL539_23995	SSF46565	Chaperone J-domain
AL539_23995	SSF49493	HSP40/DnaJ peptide-binding domain
AL539_23995	SSF57938	DnaJ/Hsp40 cysteine-rich domain
AL539_24000	SSF54523	Pili subunits
AL539_24005	SSF54523	Pili subunits
AL539_24030	SSF53927	Cytidine deaminase-like
AL539_24040	SSF53850	Periplasmic binding protein-like II
AL539_24040	SSF53955	Lysozyme-like
AL539_24045	SSF109736	FGAM synthase PurL, linker domain
AL539_24045	SSF52317	Class I glutamine amidotransferase-like
AL539_24045	SSF55326	PurM N-terminal domain-like
AL539_24045	SSF56042	PurM C-terminal domain-like
AL539_24045	SSF82697	PurS-like
AL539_24060	SSF56935	Porins
AL539_24065	SSF53187	Zn-dependent exopeptidases
AL539_24075	SSF53187	Zn-dependent exopeptidases
AL539_24085	SSF53271	PRTase-like
AL539_24090	SSF53474	alpha/beta-Hydrolases
AL539_24100	SSF53633	Carbamate kinase-like
AL539_24100	SSF88697	PUA domain-like
AL539_24105	SSF53720	ALDH-like
AL539_24115	SSF53597	Dihydrofolate reductase-like
AL539_24115	SSF53927	Cytidine deaminase-like
AL539_24120	SSF63380	Riboflavin synthase domain-like
AL539_24125	SSF142695	RibA-like
AL539_24125	SSF55821	YrdC/RibB
AL539_24130	SSF52121	Lumazine synthase
AL539_24135	SSF48013	NusB-like
AL539_24140	SSF55326	PurM N-terminal domain-like
AL539_24140	SSF56042	PurM C-terminal domain-like
AL539_24145	SSF101307	YutG-like
AL539_24150	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
AL539_24150	SSF52922	TK C-terminal domain-like
AL539_24155	SSF48576	Terpenoid synthases
AL539_24160	SSF116842	XseB-like
AL539_24170	SSF103088	OmpA-like
AL539_24175	SSF143437	THUMP domain-like
AL539_24175	SSF52402	Adenine nucleotide alpha hydrolases-like
AL539_24175	SSF52821	Rhodanese/Cell cycle control phosphatase
AL539_24180	SSF46785	"Winged helix" DNA-binding domain
AL539_24180	SSF53850	Periplasmic binding protein-like II
AL539_24185	SSF53474	alpha/beta-Hydrolases
AL539_24195	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
AL539_24200	SSF47807	5' to 3' exonuclease, C-terminal subdomain
AL539_24200	SSF88723	PIN domain-like
AL539_24205	SSF102405	MCP/YpsA-like
AL539_24210	SSF55073	Nucleotide cyclase
AL539_24215	SSF48452	TPR-like
AL539_24220	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
AL539_24235	SSF53850	Periplasmic binding protein-like II
AL539_24240	SSF161098	MetI-like
AL539_24245	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_24245	SSF55021	ACT-like
AL539_24250	SSF56784	HAD-like
AL539_24255	SSF47413	lambda repressor-like DNA-binding domains
AL539_24255	SSF53822	Periplasmic binding protein-like I
AL539_24260	SSF55604	Glucose permease domain IIB
AL539_24265	SSF51011	Glycosyl hydrolase domain
AL539_24265	SSF51445	(Trans)glycosidases
AL539_24275	SSF46894	C-terminal effector domain of the bipartite response regulators
AL539_24285	SSF53383	PLP-dependent transferases
AL539_24290	SSF102114	Radical SAM enzymes
AL539_24295	SSF55681	Class II aaRS and biotin synthetases
AL539_24300	SSF117991	YbeD/HP0495-like
AL539_24305	SSF56601	beta-lactamase/transpeptidase-like
AL539_24305	SSF69189	Penicillin-binding protein associated domain
AL539_24310	SSF110997	Sporulation related repeat
AL539_24310	SSF50685	Barwin-like endoglucanases
AL539_24320	SSF56519	Penicillin binding protein dimerisation domain
AL539_24320	SSF56601	beta-lactamase/transpeptidase-like
AL539_24325	SSF75217	alpha/beta knot
AL539_24330	SSF81301	Nucleotidyltransferase
AL539_24335	SSF48019	post-AAA+ oligomerization domain-like
AL539_24335	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_24345	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
AL539_24345	SSF50677	ValRS/IleRS/LeuRS editing domain
AL539_24345	SSF52374	Nucleotidylyl transferase
AL539_24355	SSF56317	Carbon-nitrogen hydrolase
AL539_24360	SSF54631	CBS-domain pair
AL539_24360	SSF56176	FAD-binding/transporter-associated domain-like
AL539_24365	SSF55486	Metalloproteases ("zincins"), catalytic domain
AL539_24370	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_24375	SSF102114	Radical SAM enzymes
AL539_24385	SSF51905	FAD/NAD(P)-binding domain
AL539_24495	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_24495	SSF81271	TGS-like
AL539_24500	SSF53178	Peptidyl-tRNA hydrolase-like
AL539_24505	SSF53271	PRTase-like
AL539_24510	SSF54211	Ribosomal protein S5 domain 2-like
AL539_24510	SSF55060	GHMP Kinase, C-terminal domain
AL539_24515	SSF89392	Prokaryotic lipoproteins and lipoprotein localization factors
AL539_24520	SSF51735	NAD(P)-binding Rossmann-fold domains
AL539_24520	SSF69075	Glutamyl tRNA-reductase dimerization domain
AL539_24520	SSF69742	Glutamyl tRNA-reductase catalytic, N-terminal domain
AL539_24525	SSF75620	Release factor
AL539_24530	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
AL539_24545	SSF51569	Aldolase
AL539_24550	SSF55816	5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain
AL539_24550	SSF56300	Metallo-dependent phosphatases
AL539_24555	SSF55826	YbaK/ProRS associated domain
AL539_24560	SSF55120	Pseudouridine synthase
AL539_24560	SSF55174	Alpha-L RNA-binding motif
AL539_24565	SSF160443	SMR domain-like
AL539_24590	SSF49384	Carbohydrate-binding domain
AL539_24590	SSF51445	(Trans)glycosidases
AL539_24590	SSF55545	beta-N-acetylhexosaminidase-like domain
AL539_24590	SSF81296	E set domains
AL539_24605	SSF55008	HMA, heavy metal-associated domain
AL539_24605	SSF56784	HAD-like
AL539_24605	SSF81653	Calcium ATPase, transduction domain A
AL539_24605	SSF81665	Calcium ATPase, transmembrane domain M
AL539_24615	SSF56935	Porins
AL539_24625	SSF48163	An anticodon-binding domain of class I aminoacyl-tRNA synthetases
AL539_24625	SSF52374	Nucleotidylyl transferase
AL539_24630	SSF103088	OmpA-like
AL539_24630	SSF56925	OMPA-like
AL539_24660	SSF140566	FlgN-like
AL539_24665	SSF101498	Anti-sigma factor FlgM
AL539_24675	SSF50341	CheW-like
AL539_24675	SSF52172	CheY-like
AL539_24680	SSF47757	Chemotaxis receptor methyltransferase CheR, N-terminal domain
AL539_24680	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
AL539_24700	SSF117143	Flagellar hook protein flgE
AL539_24705	SSF117143	Flagellar hook protein flgE
AL539_24710	SSF117143	Flagellar hook protein flgE
AL539_24730	SSF64518	Phase 1 flagellin
AL539_24735	SSF64518	Phase 1 flagellin
AL539_24740	SSF64518	Phase 1 flagellin
AL539_24750	SSF64518	Phase 1 flagellin
AL539_24755	SSF64518	Phase 1 flagellin
AL539_24760	SSF51261	Duplicated hybrid motif
AL539_24765	SSF47831	Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain
AL539_24765	SSF51621	Phosphoenolpyruvate/pyruvate domain
AL539_24765	SSF52009	Phosphohistidine domain
AL539_24770	SSF55594	HPr-like
AL539_24780	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
AL539_24790	SSF64383	Cell-division protein ZipA, C-terminal domain
AL539_24795	SSF47781	RuvA domain 2-like
AL539_24795	SSF50249	Nucleic acid-binding proteins
AL539_24795	SSF52113	BRCT domain
AL539_24795	SSF56091	DNA ligase/mRNA capping enzyme, catalytic domain
AL539_24810	SSF141322	NfeD domain-like
AL539_24815	SSF117892	Band 7/SPFH domain
AL539_24820	SSF52833	Thioredoxin-like
AL539_24820	SSF69103	Arp2/3 complex 16 kDa subunit ARPC5
AL539_24830	SSF51735	NAD(P)-binding Rossmann-fold domains
AL539_24835	SSF51735	NAD(P)-binding Rossmann-fold domains
AL539_24850	SSF54913	GlnB-like
AL539_24855	SSF54631	CBS-domain pair
AL539_24865	SSF56300	Metallo-dependent phosphatases
AL539_24870	SSF52833	Thioredoxin-like
AL539_24885	SSF46894	C-terminal effector domain of the bipartite response regulators
AL539_24890	SSF110942	HSP90 C-terminal domain
AL539_24890	SSF54211	Ribosomal protein S5 domain 2-like
AL539_24890	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
AL539_24895	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_24900	SSF53800	Chelatase
AL539_24905	SSF103473	MFS general substrate transporter
AL539_24910	SSF50104	Translation proteins SH3-like domain
AL539_24910	SSF82679	N-utilization substance G protein NusG, N-terminal domain
AL539_24915	SSF52402	Adenine nucleotide alpha hydrolases-like
AL539_24915	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
AL539_24920	SSF51735	NAD(P)-binding Rossmann-fold domains
AL539_24925	SSF46785	"Winged helix" DNA-binding domain
AL539_24925	SSF53067	Actin-like ATPase domain
AL539_24930	SSF51338	Composite domain of metallo-dependent hydrolases
AL539_24930	SSF51556	Metallo-dependent hydrolases
AL539_24940	SSF55604	Glucose permease domain IIB
AL539_24945	SSF50715	Ribosomal protein L25-like
AL539_24945	SSF52374	Nucleotidylyl transferase
AL539_24950	SSF46785	"Winged helix" DNA-binding domain
AL539_24955	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
AL539_24960	SSF52218	Flavoproteins
AL539_24970	SSF53474	alpha/beta-Hydrolases
AL539_24975	SSF47598	Ribbon-helix-helix
AL539_24975	SSF82808	Replication modulator SeqA, C-terminal DNA-binding domain
AL539_24980	SSF53738	Phosphoglucomutase, first 3 domains
AL539_24980	SSF55957	Phosphoglucomutase, C-terminal domain
AL539_24990	SSF102705	NIF3 (NGG1p interacting factor 3)-like
AL539_24995	SSF48256	Citrate synthase
AL539_25000	SSF81343	Fumarate reductase respiratory complex transmembrane subunits
AL539_25005	SSF81343	Fumarate reductase respiratory complex transmembrane subunits
AL539_25010	SSF46977	Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
AL539_25010	SSF51905	FAD/NAD(P)-binding domain
AL539_25010	SSF56425	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
AL539_25015	SSF46548	alpha-helical ferredoxin
AL539_25015	SSF54292	2Fe-2S ferredoxin-like
AL539_25020	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
AL539_25025	SSF47005	Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
AL539_25025	SSF51230	Single hybrid motif
AL539_25025	SSF52777	CoA-dependent acyltransferases
AL539_25030	SSF52210	Succinyl-CoA synthetase domains
AL539_25030	SSF56059	Glutathione synthetase ATP-binding domain-like
AL539_25035	SSF51735	NAD(P)-binding Rossmann-fold domains
AL539_25035	SSF52210	Succinyl-CoA synthetase domains
AL539_25040	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
AL539_25045	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_25050	SSF53807	"Helical backbone" metal receptor
AL539_25055	SSF46689	Homeodomain-like
AL539_25055	SSF63829	Calcium-dependent phosphotriesterase
AL539_25060	SSF50037	C-terminal domain of transcriptional repressors
AL539_25065	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_25070	SSF46785	"Winged helix" DNA-binding domain
AL539_25080	SSF54197	HIT-like
AL539_25085	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
AL539_25085	SSF52374	Nucleotidylyl transferase
AL539_25085	SSF55190	Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain
AL539_25095	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
AL539_25100	SSF53328	Formyltransferase
AL539_25100	SSF55021	ACT-like
AL539_25105	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_25110	SSF53067	Actin-like ATPase domain
AL539_25125	SSF53474	alpha/beta-Hydrolases
AL539_25130	SSF56801	Acetyl-CoA synthetase-like
AL539_25135	SSF47819	HRDC-like
AL539_25135	SSF53098	Ribonuclease H-like
AL539_25140	SSF55229	Cell division protein MinE topological specificity domain
AL539_25145	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_25150	SSF63848	Cell-division inhibitor MinC, C-terminal domain
AL539_25155	SSF160191	YcgL-like
AL539_25160	SSF53955	Lysozyme-like
AL539_25165	SSF46785	"Winged helix" DNA-binding domain
AL539_25165	SSF53850	Periplasmic binding protein-like II
AL539_25175	SSF51735	NAD(P)-binding Rossmann-fold domains
AL539_25175	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
AL539_25185	SSF53901	Thiolase-like
AL539_25190	SSF51735	NAD(P)-binding Rossmann-fold domains
AL539_25195	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
AL539_25200	SSF53901	Thiolase-like
AL539_25210	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
AL539_25215	SSF89392	Prokaryotic lipoproteins and lipoprotein localization factors
AL539_25220	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
AL539_25225	SSF48557	L-aspartase-like
AL539_25230	SSF53448	Nucleotide-diphospho-sugar transferases
AL539_25235	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
AL539_25240	SSF56801	Acetyl-CoA synthetase-like
AL539_25250	SSF47336	ACP-like
AL539_25255	SSF47336	ACP-like
AL539_25260	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
AL539_25265	SSF53901	Thiolase-like
AL539_25280	SSF51905	FAD/NAD(P)-binding domain
AL539_25285	SSF53955	Lysozyme-like
AL539_25290	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_25295	SSF116726	TrkA C-terminal domain-like
AL539_25295	SSF51735	NAD(P)-binding Rossmann-fold domains
AL539_25305	SSF49299	PKD domain
AL539_25305	SSF55486	Metalloproteases ("zincins"), catalytic domain
AL539_25340	SSF46689	Homeodomain-like
AL539_25340	SSF52172	CheY-like
AL539_25340	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_25345	SSF103190	Sensory domain-like
AL539_25345	SSF47384	Homodimeric domain of signal transducing histidine kinase
AL539_25345	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
AL539_25355	SSF102735	Trigger factor ribosome-binding domain
AL539_25355	SSF109998	Triger factor/SurA peptide-binding domain-like
AL539_25355	SSF54534	FKBP-like
AL539_25360	SSF52096	ClpP/crotonase
AL539_25365	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_25365	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
AL539_25370	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_25370	SSF54211	Ribosomal protein S5 domain 2-like
AL539_25370	SSF88697	PUA domain-like
AL539_25375	SSF47729	IHF-like DNA-binding proteins
AL539_25380	SSF109998	Triger factor/SurA peptide-binding domain-like
AL539_25380	SSF54534	FKBP-like
AL539_25385	SSF47781	RuvA domain 2-like
AL539_25390	SSF144091	Rhomboid-like
AL539_25400	SSF109604	HD-domain/PDEase-like
AL539_25405	SSF109604	HD-domain/PDEase-like
AL539_25410	SSF53383	PLP-dependent transferases
AL539_25415	SSF56322	ADC synthase
AL539_25420	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
AL539_25425	SSF53474	alpha/beta-Hydrolases
AL539_25430	SSF52096	ClpP/crotonase
AL539_25435	SSF51604	Enolase C-terminal domain-like
AL539_25435	SSF54826	Enolase N-terminal domain-like
AL539_25440	SSF56801	Acetyl-CoA synthetase-like
AL539_25455	SSF103473	MFS general substrate transporter
AL539_25455	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
AL539_25460	SSF46689	Homeodomain-like
AL539_25460	SSF48498	Tetracyclin repressor-like, C-terminal domain
AL539_25465	SSF54427	NTF2-like
AL539_25505	SSF111369	HlyD-like secretion proteins
AL539_25510	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
AL539_25510	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
AL539_25510	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
AL539_25515	SSF56925	OMPA-like
AL539_25520	SSF158757	SMc04008-like
AL539_25525	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
AL539_25530	SSF46785	"Winged helix" DNA-binding domain
AL539_25530	SSF54909	Dimeric alpha+beta barrel
AL539_25540	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
AL539_25550	SSF46767	Methylated DNA-protein cysteine methyltransferase, C-terminal domain
AL539_25560	SSF53850	Periplasmic binding protein-like II
AL539_25560	SSF55073	Nucleotide cyclase
AL539_25570	SSF55315	L30e-like
AL539_25570	SSF75217	alpha/beta knot
AL539_25575	SSF54631	CBS-domain pair
AL539_25580	SSF55008	HMA, heavy metal-associated domain
AL539_25580	SSF56784	HAD-like
AL539_25580	SSF81653	Calcium ATPase, transduction domain A
AL539_25580	SSF81665	Calcium ATPase, transmembrane domain M
AL539_25585	SSF53167	Purine and uridine phosphorylases
AL539_25590	SSF52980	Restriction endonuclease-like
AL539_25595	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
AL539_25600	SSF54197	HIT-like
AL539_25605	SSF48452	TPR-like
AL539_25620	SSF56112	Protein kinase-like (PK-like)
AL539_25625	SSF53474	alpha/beta-Hydrolases
AL539_25630	SSF51905	FAD/NAD(P)-binding domain
AL539_25635	SSF55729	Acyl-CoA N-acyltransferases (Nat)
AL539_25645	SSF141259	CarD-like
AL539_25645	SSF143517	TRCF domain-like
AL539_25645	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_25660	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_25675	SSF56281	Metallo-hydrolase/oxidoreductase
AL539_25680	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_25680	SSF90123	ABC transporter transmembrane region
AL539_25685	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_25690	SSF158997	Trm112p-like
AL539_25695	SSF53448	Nucleotide-diphospho-sugar transferases
AL539_25710	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_25720	SSF116960	YfbU-like
AL539_25730	SSF102114	Radical SAM enzymes
AL539_25740	SSF51998	PFL-like glycyl radical enzymes
AL539_25760	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_25765	SSF53850	Periplasmic binding protein-like II
AL539_25770	SSF161098	MetI-like
AL539_25775	SSF161098	MetI-like
AL539_25785	SSF56219	DNase I-like
AL539_25805	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_25810	SSF56935	Porins
AL539_25820	SSF55120	Pseudouridine synthase
AL539_25825	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
AL539_25830	SSF50249	Nucleic acid-binding proteins
AL539_25835	SSF54736	ClpS-like
AL539_25840	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_25840	SSF81923	Double Clp-N motif
AL539_25845	SSF50249	Nucleic acid-binding proteins
AL539_25850	SSF55729	Acyl-CoA N-acyltransferases (Nat)
AL539_25855	SSF55729	Acyl-CoA N-acyltransferases (Nat)
AL539_25865	SSF55205	EPT/RTPC-like
AL539_25875	SSF56712	Prokaryotic type I DNA topoisomerase
AL539_25875	SSF57783	Zinc beta-ribbon
AL539_25880	SSF51161	Trimeric LpxA-like enzymes
AL539_25880	SSF53448	Nucleotide-diphospho-sugar transferases
AL539_25885	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
AL539_25890	SSF53474	alpha/beta-Hydrolases
AL539_25905	SSF159894	YgaC/TfoX-N like
AL539_25910	SSF47413	lambda repressor-like DNA-binding domains
AL539_25910	SSF53822	Periplasmic binding protein-like I
AL539_25915	SSF89155	TorD-like
AL539_25920	SSF46894	C-terminal effector domain of the bipartite response regulators
AL539_25920	SSF52172	CheY-like
AL539_25930	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
AL539_25935	SSF140570	MukF C-terminal domain-like
AL539_25935	SSF46785	"Winged helix" DNA-binding domain
AL539_25945	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_25955	SSF56059	Glutathione synthetase ATP-binding domain-like
AL539_25965	SSF50630	Acid proteases
AL539_25975	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
AL539_25980	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
AL539_25985	SSF117396	TM1631-like
AL539_25990	SSF50249	Nucleic acid-binding proteins
AL539_25990	SSF55261	GAD domain-like
AL539_25990	SSF55681	Class II aaRS and biotin synthetases
AL539_25995	SSF75625	YebC-like
AL539_26000	SSF53098	Ribonuclease H-like
AL539_26005	SSF46929	DNA helicase RuvA subunit, C-terminal domain
AL539_26005	SSF47781	RuvA domain 2-like
AL539_26005	SSF50249	Nucleic acid-binding proteins
AL539_26010	SSF46785	"Winged helix" DNA-binding domain
AL539_26010	SSF52540	P-loop containing nucleoside triphosphate hydrolases
AL539_26035	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
AL539_26050	SSF74653	TolA/TonB C-terminal domain
AL539_26055	SSF52964	TolB, N-terminal domain
AL539_26055	SSF69304	Tricorn protease N-terminal domain
AL539_26060	SSF103088	OmpA-like
AL539_26065	SSF48452	TPR-like
AL539_26070	SSF142754	NadA-like
AL539_26075	SSF51735	NAD(P)-binding Rossmann-fold domains
AL539_26075	SSF81324	Voltage-gated potassium channels
AL539_26090	SSF52440	PreATP-grasp domain
AL539_26090	SSF56059	Glutathione synthetase ATP-binding domain-like
AL539_26095	SSF101327	YgfB-like