AL541_00100	PWY-4381	fatty acid biosynthesis initiation I
AL541_00100	PWY-5743	3-hydroxypropanoate cycle
AL541_00100	PWY-5744	glyoxylate assimilation
AL541_00100	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AL541_00100	PWY-6722	candicidin biosynthesis
AL541_00205	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
AL541_00205	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
AL541_00295	PWY-5963	thio-molybdenum cofactor biosynthesis
AL541_00310	PWY-5686	UMP biosynthesis
AL541_00310	PWY-7790	AL541_00310
AL541_00310	PWY-7791	AL541_00310
AL541_00395	PWY-6655	xanthan biosynthesis
AL541_00395	PWY-6658	acetan biosynthesis
AL541_00750	PWY-4202	arsenate detoxification I (glutaredoxin)
AL541_00750	PWY-5532	adenosine nucleotides degradation IV
AL541_00750	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
AL541_00750	PWY-6608	guanosine nucleotides degradation III
AL541_00750	PWY-6609	adenine and adenosine salvage III
AL541_00750	PWY-6611	adenine and adenosine salvage V
AL541_00750	PWY-6620	guanine and guanosine salvage
AL541_00750	PWY-6627	salinosporamide A biosynthesis
AL541_00750	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
AL541_00750	PWY-7179	purine deoxyribonucleosides degradation I
AL541_00750	PWY-7179-1	purine deoxyribonucleosides degradation
AL541_00890	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
AL541_00890	PWY-5743	3-hydroxypropanoate cycle
AL541_00890	PWY-5744	glyoxylate assimilation
AL541_00890	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AL541_00890	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AL541_00890	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AL541_00890	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AL541_00920	PWY-7378	aminopropanol phosphate biosynthesis II
AL541_00945	PWY-6854	ethylene biosynthesis III (microbes)
AL541_01030	PWY-7980	AL541_01030
AL541_01185	PWY-5480	pyruvate fermentation to ethanol I
AL541_01185	PWY-5485	pyruvate fermentation to acetate IV
AL541_01185	PWY-5493	reductive monocarboxylic acid cycle
AL541_01195	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AL541_01195	PWY-5723	Rubisco shunt
AL541_01345	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AL541_01345	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AL541_01445	PWY-7511	protein ubiquitylation
AL541_01480	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AL541_01480	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
AL541_01480	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AL541_01480	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AL541_01485	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
AL541_01485	PWY-622	starch biosynthesis
AL541_01485	PWY-7900	AL541_01485
AL541_01490	PWY-5941	glycogen degradation II (eukaryotic)
AL541_01490	PWY-6724	starch degradation II
AL541_01490	PWY-6737	starch degradation V
AL541_01490	PWY-7238	sucrose biosynthesis II
AL541_01495	PWY-5941	glycogen degradation II (eukaryotic)
AL541_01495	PWY-6731	starch degradation III
AL541_01495	PWY-6737	starch degradation V
AL541_01495	PWY-7238	sucrose biosynthesis II
AL541_01535	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
AL541_01535	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
AL541_01655	PWY-7352	daunorubicin biosynthesis
AL541_01655	PWY-7354	aclacinomycin biosynthesis
AL541_01660	PWY-7352	daunorubicin biosynthesis
AL541_01660	PWY-7354	aclacinomycin biosynthesis
AL541_02005	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
AL541_02005	PWY-6853	ethylene biosynthesis II (microbes)
AL541_02005	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
AL541_02020	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
AL541_02020	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
AL541_02160	PWY-6168	flavin biosynthesis III (fungi)
AL541_02160	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AL541_02160	PWY-7991	AL541_02160
AL541_02185	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AL541_02185	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
AL541_02185	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AL541_02185	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AL541_02280	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
AL541_02280	PWY-6855	chitin degradation I (archaea)
AL541_02280	PWY-6906	chitin derivatives degradation
AL541_02335	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
AL541_02360	PWY-6855	chitin degradation I (archaea)
AL541_02360	PWY-6902	chitin degradation II
AL541_02360	PWY-7822	AL541_02360
AL541_02370	PWY-5532	adenosine nucleotides degradation IV
AL541_02370	PWY-7181	pyrimidine deoxyribonucleosides degradation
AL541_02430	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
AL541_02435	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
AL541_02435	PWY-3162	L-tryptophan degradation V (side chain pathway)
AL541_02435	PWY-5057	L-valine degradation II
AL541_02435	PWY-5076	L-leucine degradation III
AL541_02435	PWY-5078	L-isoleucine degradation II
AL541_02435	PWY-5079	L-phenylalanine degradation III
AL541_02435	PWY-5082	L-methionine degradation III
AL541_02435	PWY-5480	pyruvate fermentation to ethanol I
AL541_02435	PWY-5486	pyruvate fermentation to ethanol II
AL541_02435	PWY-5751	phenylethanol biosynthesis
AL541_02435	PWY-6313	serotonin degradation
AL541_02435	PWY-6333	acetaldehyde biosynthesis I
AL541_02435	PWY-6342	noradrenaline and adrenaline degradation
AL541_02435	PWY-6587	pyruvate fermentation to ethanol III
AL541_02435	PWY-6802	salidroside biosynthesis
AL541_02435	PWY-6871	3-methylbutanol biosynthesis
AL541_02435	PWY-7013	L-1,2-propanediol degradation
AL541_02435	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AL541_02435	PWY-7118	chitin degradation to ethanol
AL541_02435	PWY-7396	butanol and isobutanol biosynthesis (engineered)
AL541_02435	PWY-7798	AL541_02435
AL541_02515	PWY-5386	methylglyoxal degradation I
AL541_02620	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
AL541_02620	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
AL541_02620	PWY-6897	thiamin salvage II
AL541_02620	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
AL541_02620	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
AL541_02620	PWY-7356	thiamin salvage IV (yeast)
AL541_02620	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
AL541_02625	PWY-6897	thiamin salvage II
AL541_02625	PWY-7356	thiamin salvage IV (yeast)
AL541_02625	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
AL541_02630	PWY-6899	base-degraded thiamin salvage
AL541_02630	PWY-7356	thiamin salvage IV (yeast)
AL541_02650	PWY-6910	hydroxymethylpyrimidine salvage
AL541_02650	PWY-7356	thiamin salvage IV (yeast)
AL541_02650	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
AL541_02855	PWY-40	putrescine biosynthesis I
AL541_02855	PWY-6305	putrescine biosynthesis IV
AL541_02860	PWY-40	putrescine biosynthesis I
AL541_02860	PWY-43	putrescine biosynthesis II
AL541_02860	PWY-6305	putrescine biosynthesis IV
AL541_02860	PWY-6834	spermidine biosynthesis III
AL541_03040	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AL541_03040	PWY-7118	chitin degradation to ethanol
AL541_03040	PWY-7294	xylose degradation IV
AL541_03040	PWY-7295	L-arabinose degradation IV
AL541_03040	PWY-7854	AL541_03040
AL541_03140	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
AL541_03140	PWY-5743	3-hydroxypropanoate cycle
AL541_03140	PWY-5744	glyoxylate assimilation
AL541_03140	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AL541_03140	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AL541_03140	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AL541_03140	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AL541_03225	PWY-6832	2-aminoethylphosphonate degradation II
AL541_03415	PWY-5123	<i>trans, trans</i>-farnesyl diphosphate biosynthesis
AL541_03415	PWY-6174	mevalonate pathway II (archaea)
AL541_03415	PWY-6383	mono-<i>trans</i>, poly-<i>cis</i> decaprenyl phosphate biosynthesis
AL541_03415	PWY-6859	<i>all-trans</i>-farnesol biosynthesis
AL541_03415	PWY-7102	bisabolene biosynthesis
AL541_03415	PWY-7391	isoprene biosynthesis II (engineered)
AL541_03415	PWY-7524	mevalonate pathway III (archaea)
AL541_03415	PWY-7560	methylerythritol phosphate pathway II
AL541_03415	PWY-922	mevalonate pathway I
AL541_03425	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
AL541_03495	PWY-723	alkylnitronates degradation
AL541_03530	PWY-5381	pyridine nucleotide cycling (plants)
AL541_03800	PWY-5484	glycolysis II (from fructose 6-phosphate)
AL541_03800	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AL541_03815	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AL541_03855	PWY-7855	AL541_03855
AL541_03860	PWY-7855	AL541_03860
AL541_04065	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AL541_04065	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AL541_04080	PWY-6610	adenine and adenosine salvage IV
AL541_04130	PWY-7039	phosphatidate metabolism, as a signaling molecule
AL541_04130	PWY-7817	AL541_04130
AL541_04180	PWY-6167	flavin biosynthesis II (archaea)
AL541_04180	PWY-6168	flavin biosynthesis III (fungi)
AL541_04305	PWY-1042	glycolysis IV (plant cytosol)
AL541_04305	PWY-5484	glycolysis II (from fructose 6-phosphate)
AL541_04305	PWY-6901	superpathway of glucose and xylose degradation
AL541_04305	PWY-7003	glycerol degradation to butanol
AL541_04430	PWY-5676	acetyl-CoA fermentation to butanoate II
AL541_04430	PWY-5741	ethylmalonyl-CoA pathway
AL541_04430	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
AL541_04430	PWY-7948	AL541_04430
AL541_04465	PWY-5674	nitrate reduction IV (dissimilatory)
AL541_04505	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AL541_04545	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AL541_04545	PWY-6164	3-dehydroquinate biosynthesis I
AL541_04545	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
AL541_04560	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AL541_04560	PWY-5723	Rubisco shunt
AL541_04560	PWY-6891	thiazole biosynthesis II (Bacillus)
AL541_04560	PWY-6892	thiazole biosynthesis I (E. coli)
AL541_04560	PWY-6901	superpathway of glucose and xylose degradation
AL541_04560	PWY-7560	methylerythritol phosphate pathway II
AL541_04565	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AL541_04565	PWY-5723	Rubisco shunt
AL541_04600	PWY-6823	molybdenum cofactor biosynthesis
AL541_04605	PWY-6823	molybdenum cofactor biosynthesis
AL541_04610	PWY-5663	tetrahydrobiopterin biosynthesis I
AL541_04610	PWY-5664	tetrahydrobiopterin biosynthesis II
AL541_04610	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
AL541_04610	PWY-6703	preQ<sub>0</sub> biosynthesis
AL541_04610	PWY-6983	tetrahydrobiopterin biosynthesis III
AL541_04610	PWY-7442	drosopterin and aurodrosopterin biosynthesis
AL541_04610	PWY-7852	AL541_04610
AL541_04650	PWY-6938	NADH repair
AL541_04715	PWY-3861	mannitol degradation II
AL541_04715	PWY-3881	mannitol biosynthesis
AL541_04715	PWY-5659	GDP-mannose biosynthesis
AL541_04715	PWY-6992	1,5-anhydrofructose degradation
AL541_04715	PWY-7456	mannan degradation
AL541_04715	PWY-7586	&beta;-1,4-D-mannosyl-<i>N</i>-acetyl-D-glucosamine degradation
AL541_04715	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
AL541_05105	PWY-5101	L-isoleucine biosynthesis II
AL541_05105	PWY-5103	L-isoleucine biosynthesis III
AL541_05105	PWY-5104	L-isoleucine biosynthesis IV
AL541_05105	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
AL541_05105	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
AL541_05105	PWY-6389	(<i>S</i>)-acetoin biosynthesis
AL541_05105	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AL541_05110	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
AL541_05185	PWY-4381	fatty acid biosynthesis initiation I
AL541_05185	PWY-5743	3-hydroxypropanoate cycle
AL541_05185	PWY-5744	glyoxylate assimilation
AL541_05185	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AL541_05185	PWY-6722	candicidin biosynthesis
AL541_05205	PWY-5642	2,4-dinitrotoluene degradation
AL541_05245	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
AL541_05245	PWY-7494	choline degradation IV
AL541_05250	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
AL541_05250	PWY-7494	choline degradation IV
AL541_05615	PWY-5987	sorgoleone biosynthesis
AL541_05615	PWY-5996	oleate biosynthesis II (animals and fungi)
AL541_05750	PWY-5506	methanol oxidation to formaldehyde IV
AL541_05780	PWY-5386	methylglyoxal degradation I
AL541_05850	PWY-6803	phosphatidylcholine acyl editing
AL541_05850	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
AL541_05850	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
AL541_05850	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
AL541_05850	PWY-7783	AL541_05850
AL541_05975	PWY-1622	formaldehyde assimilation I (serine pathway)
AL541_05975	PWY-181	photorespiration
AL541_05975	PWY-2161	folate polyglutamylation
AL541_05975	PWY-2201	folate transformations I
AL541_05975	PWY-3661	glycine betaine degradation I
AL541_05975	PWY-3661-1	glycine betaine degradation II (mammalian)
AL541_05975	PWY-3841	folate transformations II
AL541_05975	PWY-5497	purine nucleobases degradation II (anaerobic)
AL541_06090	PWY-6788	cellulose degradation II (fungi)
AL541_06090	PWY-6855	chitin degradation I (archaea)
AL541_06090	PWY-6902	chitin degradation II
AL541_06090	PWY-7822	AL541_06090
AL541_06095	PWY-622	starch biosynthesis
AL541_06095	PWY-7902	AL541_06095
AL541_06100	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
AL541_06100	PWY-2161	folate polyglutamylation
AL541_06100	PWY-2201	folate transformations I
AL541_06100	PWY-3841	folate transformations II
AL541_06140	PWY-6012	acyl carrier protein metabolism I
AL541_06290	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AL541_06290	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AL541_06290	PWY-5989	stearate biosynthesis II (bacteria and plants)
AL541_06290	PWY-6113	superpathway of mycolate biosynthesis
AL541_06290	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AL541_06290	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AL541_06290	PWY-7663	gondoate biosynthesis (anaerobic)
AL541_06290	PWY-7664	oleate biosynthesis IV (anaerobic)
AL541_06290	PWY-7858	AL541_06290
AL541_06290	PWYG-321	mycolate biosynthesis
AL541_06325	PWY-4041	&gamma;-glutamyl cycle
AL541_06325	PWY-7942	AL541_06325
AL541_06335	PWY-3821	galactose degradation III
AL541_06335	PWY-6317	galactose degradation I (Leloir pathway)
AL541_06335	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
AL541_06335	PWY-6527	stachyose degradation
AL541_06335	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
AL541_06335	PWY-7344	UDP-D-galactose biosynthesis
AL541_06355	PWY-5392	reductive TCA cycle II
AL541_06355	PWY-5537	pyruvate fermentation to acetate V
AL541_06355	PWY-5538	pyruvate fermentation to acetate VI
AL541_06355	PWY-5690	TCA cycle II (plants and fungi)
AL541_06355	PWY-5913	TCA cycle VI (obligate autotrophs)
AL541_06355	PWY-6728	methylaspartate cycle
AL541_06355	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AL541_06355	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AL541_06365	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AL541_06365	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AL541_06365	PWY-7953	AL541_06365
AL541_06630	PWY-5913	TCA cycle VI (obligate autotrophs)
AL541_06630	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
AL541_06630	PWY-6638	sulfolactate degradation III
AL541_06630	PWY-6642	(<i>R</i>)-cysteate degradation
AL541_06630	PWY-6643	coenzyme M biosynthesis II
AL541_06630	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AL541_06630	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AL541_06630	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AL541_06650	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AL541_06650	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AL541_06650	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AL541_06685	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AL541_06685	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AL541_06745	PWY-3861	mannitol degradation II
AL541_06745	PWY-3881	mannitol biosynthesis
AL541_06745	PWY-5659	GDP-mannose biosynthesis
AL541_06745	PWY-6992	1,5-anhydrofructose degradation
AL541_06745	PWY-7456	mannan degradation
AL541_06745	PWY-7586	&beta;-1,4-D-mannosyl-<i>N</i>-acetyl-D-glucosamine degradation
AL541_06745	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
AL541_06750	PWY-6174	mevalonate pathway II (archaea)
AL541_06750	PWY-7391	isoprene biosynthesis II (engineered)
AL541_06750	PWY-7524	mevalonate pathway III (archaea)
AL541_06750	PWY-922	mevalonate pathway I
AL541_06765	PWY-4381	fatty acid biosynthesis initiation I
AL541_06825	PWY-5194	siroheme biosynthesis
AL541_06825	PWY-5196	factor 430 biosynthesis
AL541_06825	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
AL541_06840	PWY-6683	sulfate reduction III (assimilatory)
AL541_06925	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AL541_06940	PWY-5386	methylglyoxal degradation I
AL541_06940	PWY-7425	2-chloroacrylate degradation I
AL541_07165	PWY-6683	sulfate reduction III (assimilatory)
AL541_07205	PWY-5194	siroheme biosynthesis
AL541_07205	PWY-5196	factor 430 biosynthesis
AL541_07205	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
AL541_07315	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AL541_07315	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
AL541_07315	PWY-7242	D-fructuronate degradation
AL541_07315	PWY-7310	D-glucosaminate degradation
AL541_07315	PWY-7562	3,6-anhydro-&alpha;-L-galactopyranose degradation
AL541_07330	PWY-6986	alginate degradation
AL541_07335	PWY-6986	alginate degradation
AL541_07505	PWY-7533	gliotoxin biosynthesis
AL541_07545	PWY-3781	aerobic respiration I (cytochrome c)
AL541_07545	PWY-4521	arsenite oxidation I (respiratory)
AL541_07545	PWY-6692	Fe(II) oxidation
AL541_07545	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AL541_07545	PWY-7544	pyruvate to cytochrome <i>bo</i> oxidase electron transfer
AL541_07580	PWY-5642	2,4-dinitrotoluene degradation
AL541_07600	PWY-4381	fatty acid biosynthesis initiation I
AL541_07600	PWY-5743	3-hydroxypropanoate cycle
AL541_07600	PWY-5744	glyoxylate assimilation
AL541_07600	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AL541_07600	PWY-6722	candicidin biosynthesis
AL541_07610	PWY-5074	mevalonate degradation
AL541_07680	PWY-5686	UMP biosynthesis
AL541_07680	PWY-7790	AL541_07680
AL541_07680	PWY-7791	AL541_07680
AL541_07730	PWY-5482	pyruvate fermentation to acetate II
AL541_07730	PWY-5485	pyruvate fermentation to acetate IV
AL541_07730	PWY-5497	purine nucleobases degradation II (anaerobic)
AL541_07825	PWY-7942	AL541_07825
AL541_07900	PWY-7158	L-phenylalanine degradation V
AL541_07905	PWY-6134	L-tyrosine biosynthesis IV
AL541_07905	PWY-7158	L-phenylalanine degradation V
AL541_07910	PWY-5108	L-isoleucine biosynthesis V
AL541_07910	PWY-5132	humulone biosynthesis
AL541_07910	PWY-5133	cohumulone biosynthesis
AL541_07910	PWY-6672	<i>cis</i>-genanyl-CoA degradation
AL541_07910	PWY-7118	chitin degradation to ethanol
AL541_07910	PWY-7857	AL541_07910
AL541_08100	PWY-3781	aerobic respiration I (cytochrome c)
AL541_08100	PWY-4521	arsenite oxidation I (respiratory)
AL541_08100	PWY-6692	Fe(II) oxidation
AL541_08100	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AL541_08110	PWY-6749	CMP-legionaminate biosynthesis I
AL541_08200	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
AL541_08335	PWY-1881	formate oxidation to CO<sub>2</sub>
AL541_08335	PWY-5497	purine nucleobases degradation II (anaerobic)
AL541_08335	PWY-6696	oxalate degradation III
AL541_08335	PWY-7985	AL541_08335
AL541_08405	PWY-5484	glycolysis II (from fructose 6-phosphate)
AL541_08420	PWY-5839	menaquinol-7 biosynthesis
AL541_08420	PWY-5851	demethylmenaquinol-9 biosynthesis
AL541_08420	PWY-5852	demethylmenaquinol-8 biosynthesis I
AL541_08420	PWY-5853	demethylmenaquinol-6 biosynthesis I
AL541_08420	PWY-5890	menaquinol-10 biosynthesis
AL541_08420	PWY-5891	menaquinol-11 biosynthesis
AL541_08420	PWY-5892	menaquinol-12 biosynthesis
AL541_08420	PWY-5895	menaquinol-13 biosynthesis
AL541_08635	PWY-5194	siroheme biosynthesis
AL541_08635	PWY-5196	factor 430 biosynthesis
AL541_08635	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
AL541_08640	PWY-5278	sulfite oxidation III
AL541_08640	PWY-5340	sulfate activation for sulfonation
AL541_08640	PWY-6683	sulfate reduction III (assimilatory)
AL541_08640	PWY-6932	selenate reduction
AL541_08645	PWY-5278	sulfite oxidation III
AL541_08645	PWY-5340	sulfate activation for sulfonation
AL541_08645	PWY-6683	sulfate reduction III (assimilatory)
AL541_08645	PWY-6932	selenate reduction
AL541_08655	PWY-5340	sulfate activation for sulfonation
AL541_08725	PWY-7805	AL541_08725
AL541_08725	PWY-7807	AL541_08725
AL541_08730	PWY-5484	glycolysis II (from fructose 6-phosphate)
AL541_08740	PWY-7883	AL541_08740
AL541_08805	PWY-1622	formaldehyde assimilation I (serine pathway)
AL541_08805	PWY-5392	reductive TCA cycle II
AL541_08805	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AL541_08805	PWY-5690	TCA cycle II (plants and fungi)
AL541_08805	PWY-5913	TCA cycle VI (obligate autotrophs)
AL541_08805	PWY-6728	methylaspartate cycle
AL541_08805	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AL541_08805	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AL541_08805	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AL541_08845	PWY-3841	folate transformations II
AL541_08845	PWY-6614	tetrahydrofolate biosynthesis
AL541_08900	PWY-7396	butanol and isobutanol biosynthesis (engineered)
AL541_08905	PWY-6871	3-methylbutanol biosynthesis
AL541_08940	PWY-5101	L-isoleucine biosynthesis II
AL541_08940	PWY-5103	L-isoleucine biosynthesis III
AL541_08940	PWY-5104	L-isoleucine biosynthesis IV
AL541_08940	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
AL541_08940	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
AL541_08940	PWY-6389	(<i>S</i>)-acetoin biosynthesis
AL541_08940	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AL541_08945	PWY-5101	L-isoleucine biosynthesis II
AL541_08945	PWY-5103	L-isoleucine biosynthesis III
AL541_08945	PWY-5104	L-isoleucine biosynthesis IV
AL541_08945	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
AL541_08945	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
AL541_08945	PWY-6389	(<i>S</i>)-acetoin biosynthesis
AL541_08945	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AL541_08960	PWY-1042	glycolysis IV (plant cytosol)
AL541_08960	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AL541_08960	PWY-5484	glycolysis II (from fructose 6-phosphate)
AL541_08960	PWY-5723	Rubisco shunt
AL541_08960	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AL541_08960	PWY-6886	1-butanol autotrophic biosynthesis
AL541_08960	PWY-6901	superpathway of glucose and xylose degradation
AL541_08960	PWY-7003	glycerol degradation to butanol
AL541_08960	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AL541_08960	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AL541_08970	PWY-6749	CMP-legionaminate biosynthesis I
AL541_08975	PWY-6349	CDP-archaeol biosynthesis
AL541_09005	PWY-6531	mannitol cycle
AL541_09170	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
AL541_09170	PWY-6148	tetrahydromethanopterin biosynthesis
AL541_09170	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
AL541_09170	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AL541_09175	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
AL541_09175	PWY-6148	tetrahydromethanopterin biosynthesis
AL541_09175	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
AL541_09175	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AL541_09175	PWY-7852	AL541_09175
AL541_09175	PWY-7853	AL541_09175
AL541_09180	PWY-5785	di-<i>trans</i>,poly-<i>cis</i>-undecaprenyl phosphate biosynthesis
AL541_09200	PWY-4041	&gamma;-glutamyl cycle
AL541_09200	PWY-4061	glutathione-mediated detoxification I
AL541_09200	PWY-5826	hypoglycin biosynthesis
AL541_09200	PWY-6842	glutathione-mediated detoxification II
AL541_09200	PWY-7112	4-hydroxy-2-nonenal detoxification
AL541_09200	PWY-7559	glutathione degradation (DUG pathway - yeast)
AL541_09320	PWY-3781	aerobic respiration I (cytochrome c)
AL541_09320	PWY-6692	Fe(II) oxidation
AL541_09320	PWY-7082	ammonia oxidation IV (autotrophic ammonia oxidizers)
AL541_09320	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AL541_09350	PWY-6478	GDP-D-<i>glycero</i>-&alpha;-D-<i>manno</i>-heptose biosynthesis
AL541_09390	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AL541_09390	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AL541_09400	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AL541_09400	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AL541_09400	PWY-7953	AL541_09400
AL541_09405	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AL541_09405	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AL541_09405	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AL541_09410	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AL541_09410	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AL541_09415	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AL541_09415	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
AL541_09415	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AL541_09415	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AL541_09420	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AL541_09420	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
AL541_09420	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AL541_09420	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AL541_09425	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AL541_09425	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AL541_09425	PWY-7953	AL541_09425
AL541_09460	PWY-6502	oxidized GTP and dGTP detoxification
AL541_09465	PWY-2941	L-lysine biosynthesis II
AL541_09465	PWY-2942	L-lysine biosynthesis III
AL541_09465	PWY-5097	L-lysine biosynthesis VI
AL541_09470	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AL541_09470	PWY-5686	UMP biosynthesis
AL541_09470	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AL541_09470	PWY-7790	AL541_09470
AL541_09470	PWY-7791	AL541_09470
AL541_09475	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AL541_09475	PWY-5686	UMP biosynthesis
AL541_09475	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AL541_09475	PWY-7790	AL541_09475
AL541_09475	PWY-7791	AL541_09475
AL541_09515	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
AL541_09515	PWY-6153	autoinducer AI-2 biosynthesis I
AL541_09515	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
AL541_09595	PWY-2941	L-lysine biosynthesis II
AL541_09595	PWY-2942	L-lysine biosynthesis III
AL541_09595	PWY-5097	L-lysine biosynthesis VI
AL541_09595	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
AL541_09595	PWY-6559	spermidine biosynthesis II
AL541_09595	PWY-6562	norspermidine biosynthesis
AL541_09595	PWY-7153	grixazone biosynthesis
AL541_09595	PWY-7977	AL541_09595
AL541_09600	PWY-702	L-methionine biosynthesis II
AL541_09685	PWY-7805	AL541_09685
AL541_09685	PWY-7807	AL541_09685
AL541_09745	PWY-3841	folate transformations II
AL541_09745	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AL541_09745	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AL541_09745	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AL541_09745	PWY-7199	pyrimidine deoxyribonucleosides salvage
AL541_09745	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AL541_09780	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
AL541_09780	PWY-6167	flavin biosynthesis II (archaea)
AL541_09780	PWY-6168	flavin biosynthesis III (fungi)
AL541_09780	PWY-7863	AL541_09780
AL541_09790	PWY-7884	AL541_09790
AL541_09800	PWY-7560	methylerythritol phosphate pathway II
AL541_09840	PWY-7883	AL541_09840
AL541_09845	PWY-6902	chitin degradation II
AL541_09845	PWY-7822	AL541_09845
AL541_09845	PWY-7883	AL541_09845
AL541_09850	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AL541_09850	PWY-6164	3-dehydroquinate biosynthesis I
AL541_09850	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
AL541_09855	PWY-3461	L-tyrosine biosynthesis II
AL541_09855	PWY-3462	L-phenylalanine biosynthesis II
AL541_09855	PWY-6120	L-tyrosine biosynthesis III
AL541_09855	PWY-6627	salinosporamide A biosynthesis
AL541_09855	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
AL541_09855	PWY-7626	bacilysin biosynthesis
AL541_09890	PWY-3461	L-tyrosine biosynthesis II
AL541_09890	PWY-3462	L-phenylalanine biosynthesis II
AL541_09890	PWY-6120	L-tyrosine biosynthesis III
AL541_09890	PWY-6627	salinosporamide A biosynthesis
AL541_09890	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
AL541_09890	PWY-7626	bacilysin biosynthesis
AL541_10070	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AL541_10070	PWY-7118	chitin degradation to ethanol
AL541_10070	PWY-7294	xylose degradation IV
AL541_10070	PWY-7295	L-arabinose degradation IV
AL541_10070	PWY-7854	AL541_10070
AL541_10075	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AL541_10090	PWY-6700	queuosine biosynthesis
AL541_10095	PWY-6700	queuosine biosynthesis
AL541_10125	PWY-2301	<i>myo</i>-inositol biosynthesis
AL541_10125	PWY-4702	phytate degradation I
AL541_10125	PWY-6363	D-<i>myo</i>-inositol (1,4,5)-trisphosphate degradation
AL541_10140	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
AL541_10180	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AL541_10180	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
AL541_10180	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AL541_10180	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AL541_10180	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
AL541_10180	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AL541_10180	PWY-7205	CMP phosphorylation
AL541_10180	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AL541_10180	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AL541_10180	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
AL541_10180	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AL541_10180	PWY-7224	purine deoxyribonucleosides salvage
AL541_10180	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
AL541_10180	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
AL541_10235	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
AL541_10235	PWY-6596	adenosine nucleotides degradation I
AL541_10235	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
AL541_10240	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
AL541_10250	PWY-6855	chitin degradation I (archaea)
AL541_10250	PWY-6902	chitin degradation II
AL541_10250	PWY-7822	AL541_10250
AL541_10365	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
AL541_10365	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
AL541_10365	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
AL541_10435	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AL541_10435	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AL541_10435	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AL541_10490	PWY-3341	L-proline biosynthesis III
AL541_10490	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
AL541_10495	PWY-3341	L-proline biosynthesis III
AL541_10495	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
AL541_10505	PWY-7991	AL541_10505
AL541_10510	PWY-6167	flavin biosynthesis II (archaea)
AL541_10510	PWY-6168	flavin biosynthesis III (fungi)
AL541_10510	PWY-7980	AL541_10510
AL541_10515	PWY-6167	flavin biosynthesis II (archaea)
AL541_10515	PWY-6168	flavin biosynthesis III (fungi)
AL541_10515	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AL541_10515	PWY-7991	AL541_10515
AL541_10520	PWY-6167	flavin biosynthesis II (archaea)
AL541_10520	PWY-6168	flavin biosynthesis III (fungi)
AL541_10530	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
AL541_10530	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
AL541_10530	PWY-6896	thiamin salvage I
AL541_10530	PWY-6897	thiamin salvage II
AL541_10535	PWY-5269	cardiolipin biosynthesis II
AL541_10535	PWY-5668	cardiolipin biosynthesis I
AL541_10535	PWY-7817	AL541_10535
AL541_10540	PWY-6891	thiazole biosynthesis II (Bacillus)
AL541_10540	PWY-6892	thiazole biosynthesis I (E. coli)
AL541_10540	PWY-7560	methylerythritol phosphate pathway II
AL541_10595	PWY-6617	adenosine nucleotides degradation III
AL541_10595	PWY-7569	arginomycin biosynthesis
AL541_10595	PWY-7570	blasticidin S biosynthesis
AL541_10610	PWY-6700	queuosine biosynthesis
AL541_10675	PWY-1622	formaldehyde assimilation I (serine pathway)
AL541_10675	PWY-181	photorespiration
AL541_10675	PWY-2161	folate polyglutamylation
AL541_10675	PWY-2201	folate transformations I
AL541_10675	PWY-3661	glycine betaine degradation I
AL541_10675	PWY-3661-1	glycine betaine degradation II (mammalian)
AL541_10675	PWY-3841	folate transformations II
AL541_10675	PWY-5497	purine nucleobases degradation II (anaerobic)
AL541_10680	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
AL541_10680	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
AL541_10685	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
AL541_10685	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
AL541_10695	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AL541_10695	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AL541_10705	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AL541_10705	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
AL541_10705	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AL541_10705	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AL541_10710	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AL541_10710	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AL541_10890	PWY-6308	L-cysteine biosynthesis II (tRNA-dependent)
AL541_10900	PWY-7560	methylerythritol phosphate pathway II
AL541_10910	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AL541_10935	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AL541_10935	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
AL541_10980	PWY-6902	chitin degradation II
AL541_10980	PWY-7822	AL541_10980
AL541_10980	PWY-7883	AL541_10980
AL541_11015	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AL541_11175	PWY-6936	seleno-amino acid biosynthesis
AL541_11295	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AL541_11330	PWY-6906	chitin derivatives degradation
AL541_11330	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
AL541_11330	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
AL541_11380	PWY-2723	trehalose degradation V
AL541_11380	PWY-3801	sucrose degradation II (sucrose synthase)
AL541_11380	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
AL541_11380	PWY-5661	GDP-glucose biosynthesis
AL541_11380	PWY-5940	streptomycin biosynthesis
AL541_11380	PWY-5941	glycogen degradation II (eukaryotic)
AL541_11380	PWY-622	starch biosynthesis
AL541_11380	PWY-6317	galactose degradation I (Leloir pathway)
AL541_11380	PWY-6731	starch degradation III
AL541_11380	PWY-6737	starch degradation V
AL541_11380	PWY-6749	CMP-legionaminate biosynthesis I
AL541_11380	PWY-6981	chitin biosynthesis
AL541_11380	PWY-7238	sucrose biosynthesis II
AL541_11380	PWY-7343	UDP-glucose biosynthesis
AL541_11380	PWY-7900	AL541_11380
AL541_11380	PWY-7902	AL541_11380
AL541_11410	PWY-3781	aerobic respiration I (cytochrome c)
AL541_11410	PWY-4302	aerobic respiration III (alternative oxidase pathway)
AL541_11410	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AL541_11410	PWY-5690	TCA cycle II (plants and fungi)
AL541_11410	PWY-6728	methylaspartate cycle
AL541_11410	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AL541_11410	PWY-7254	TCA cycle VII (acetate-producers)
AL541_11410	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AL541_11415	PWY-3781	aerobic respiration I (cytochrome c)
AL541_11415	PWY-4302	aerobic respiration III (alternative oxidase pathway)
AL541_11415	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AL541_11415	PWY-5690	TCA cycle II (plants and fungi)
AL541_11415	PWY-6728	methylaspartate cycle
AL541_11415	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AL541_11415	PWY-7254	TCA cycle VII (acetate-producers)
AL541_11415	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AL541_11420	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
AL541_11425	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
AL541_11430	PWY-5392	reductive TCA cycle II
AL541_11430	PWY-5537	pyruvate fermentation to acetate V
AL541_11430	PWY-5538	pyruvate fermentation to acetate VI
AL541_11430	PWY-5690	TCA cycle II (plants and fungi)
AL541_11430	PWY-5913	TCA cycle VI (obligate autotrophs)
AL541_11430	PWY-6728	methylaspartate cycle
AL541_11430	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AL541_11430	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AL541_11435	PWY-5392	reductive TCA cycle II
AL541_11435	PWY-5537	pyruvate fermentation to acetate V
AL541_11435	PWY-5538	pyruvate fermentation to acetate VI
AL541_11435	PWY-5690	TCA cycle II (plants and fungi)
AL541_11435	PWY-5913	TCA cycle VI (obligate autotrophs)
AL541_11435	PWY-6728	methylaspartate cycle
AL541_11435	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AL541_11435	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AL541_11500	PWY-2201	folate transformations I
AL541_11500	PWY-5497	purine nucleobases degradation II (anaerobic)
AL541_11500	PWY-7909	AL541_11500
AL541_11575	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
AL541_11575	PWY-2201	folate transformations I
AL541_11575	PWY-3841	folate transformations II
AL541_11575	PWY-5030	L-histidine degradation III
AL541_11575	PWY-5497	purine nucleobases degradation II (anaerobic)
AL541_11575	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
AL541_11575	PWY-7909	AL541_11575
AL541_11590	PWY-5367	petroselinate biosynthesis
AL541_11590	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AL541_11590	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AL541_11590	PWY-5989	stearate biosynthesis II (bacteria and plants)
AL541_11590	PWY-5994	palmitate biosynthesis I (animals and fungi)
AL541_11590	PWY-6113	superpathway of mycolate biosynthesis
AL541_11590	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AL541_11590	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AL541_11590	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AL541_11590	PWY-7663	gondoate biosynthesis (anaerobic)
AL541_11590	PWY-7664	oleate biosynthesis IV (anaerobic)
AL541_11590	PWY-7858	AL541_11590
AL541_11590	PWYG-321	mycolate biosynthesis
AL541_11595	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AL541_11595	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AL541_11595	PWY-5989	stearate biosynthesis II (bacteria and plants)
AL541_11595	PWY-5994	palmitate biosynthesis I (animals and fungi)
AL541_11595	PWY-6113	superpathway of mycolate biosynthesis
AL541_11595	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AL541_11595	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AL541_11595	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AL541_11595	PWY-7663	gondoate biosynthesis (anaerobic)
AL541_11595	PWY-7664	oleate biosynthesis IV (anaerobic)
AL541_11595	PWY-7858	AL541_11595
AL541_11595	PWYG-321	mycolate biosynthesis
AL541_11635	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AL541_11635	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AL541_11635	PWY-5989	stearate biosynthesis II (bacteria and plants)
AL541_11635	PWY-5994	palmitate biosynthesis I (animals and fungi)
AL541_11635	PWY-6113	superpathway of mycolate biosynthesis
AL541_11635	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AL541_11635	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AL541_11635	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AL541_11635	PWY-7663	gondoate biosynthesis (anaerobic)
AL541_11635	PWY-7664	oleate biosynthesis IV (anaerobic)
AL541_11635	PWY-7858	AL541_11635
AL541_11635	PWYG-321	mycolate biosynthesis
AL541_11815	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
AL541_11815	PWY-5901	2,3-dihydroxybenzoate biosynthesis
AL541_11815	PWY-6406	salicylate biosynthesis I
AL541_11820	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
AL541_11825	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
AL541_11830	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
AL541_11835	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
AL541_11840	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
AL541_11980	PWY-4202	arsenate detoxification I (glutaredoxin)
AL541_11980	PWY-5532	adenosine nucleotides degradation IV
AL541_11980	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
AL541_11980	PWY-6608	guanosine nucleotides degradation III
AL541_11980	PWY-6609	adenine and adenosine salvage III
AL541_11980	PWY-6611	adenine and adenosine salvage V
AL541_11980	PWY-6620	guanine and guanosine salvage
AL541_11980	PWY-6627	salinosporamide A biosynthesis
AL541_11980	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
AL541_11980	PWY-7179	purine deoxyribonucleosides degradation I
AL541_11980	PWY-7179-1	purine deoxyribonucleosides degradation
AL541_12015	PWY-6896	thiamin salvage I
AL541_12095	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AL541_12140	PWY-5480	pyruvate fermentation to ethanol I
AL541_12140	PWY-5485	pyruvate fermentation to acetate IV
AL541_12140	PWY-5493	reductive monocarboxylic acid cycle
AL541_12225	PWY-5913	TCA cycle VI (obligate autotrophs)
AL541_12225	PWY-6549	L-glutamine biosynthesis III
AL541_12225	PWY-6728	methylaspartate cycle
AL541_12225	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AL541_12225	PWY-7124	ethylene biosynthesis V (engineered)
AL541_12225	PWY-7254	TCA cycle VII (acetate-producers)
AL541_12225	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
AL541_12250	PWY-7802	AL541_12250
AL541_12255	PWY-7801	AL541_12255
AL541_12265	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AL541_12280	PWY-622	starch biosynthesis
AL541_12280	PWY-7902	AL541_12280
AL541_12285	PWY-622	starch biosynthesis
AL541_12355	PWY-6840	homoglutathione biosynthesis
AL541_12355	PWY-7255	ergothioneine biosynthesis I (bacteria)
AL541_12425	PWY-7545	pyruvate to cytochrome <i>bd</i> terminal oxidase electron transfer
AL541_12470	PWY-5316	nicotine biosynthesis
AL541_12470	PWY-7342	superpathway of nicotine biosynthesis
AL541_12630	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
AL541_12655	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
AL541_12660	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AL541_12660	PWY-6578	8-amino-7-oxononanoate biosynthesis III
AL541_12660	PWY-7147	8-amino-7-oxononanoate biosynthesis II
AL541_12665	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AL541_12670	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
AL541_12725	PWY-6123	inosine-5'-phosphate biosynthesis I
AL541_12725	PWY-6124	inosine-5'-phosphate biosynthesis II
AL541_12725	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AL541_12725	PWY-7234	inosine-5'-phosphate biosynthesis III
AL541_12735	PWY-7887	AL541_12735
AL541_12735	PWY-7892	AL541_12735
AL541_12825	PWY-7199	pyrimidine deoxyribonucleosides salvage
AL541_12885	PWY-6527	stachyose degradation
AL541_12895	PWY-7805	AL541_12895
AL541_12895	PWY-7807	AL541_12895
AL541_13165	PWY-7094	fatty acid salvage
AL541_13165	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
AL541_13170	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AL541_13170	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AL541_13170	PWY-5989	stearate biosynthesis II (bacteria and plants)
AL541_13170	PWY-6113	superpathway of mycolate biosynthesis
AL541_13170	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AL541_13170	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AL541_13170	PWY-7663	gondoate biosynthesis (anaerobic)
AL541_13170	PWY-7664	oleate biosynthesis IV (anaerobic)
AL541_13170	PWY-7858	AL541_13170
AL541_13170	PWYG-321	mycolate biosynthesis
AL541_13195	PWY-5155	&beta;-alanine biosynthesis III
AL541_13305	PWY-6339	syringate degradation
AL541_13330	PWY-6123	inosine-5'-phosphate biosynthesis I
AL541_13330	PWY-6124	inosine-5'-phosphate biosynthesis II
AL541_13330	PWY-7234	inosine-5'-phosphate biosynthesis III
AL541_13370	PWY-6825	phosphatidylcholine biosynthesis V
AL541_13380	PWY-5028	L-histidine degradation II
AL541_13380	PWY-5030	L-histidine degradation III
AL541_13385	PWY-5028	L-histidine degradation II
AL541_13385	PWY-5030	L-histidine degradation III
AL541_13395	PWY-5028	L-histidine degradation II
AL541_13395	PWY-5030	L-histidine degradation III
AL541_13505	PWY-6556	pyrimidine ribonucleosides salvage II
AL541_13505	PWY-7181	pyrimidine deoxyribonucleosides degradation
AL541_13505	PWY-7193	pyrimidine ribonucleosides salvage I
AL541_13505	PWY-7199	pyrimidine deoxyribonucleosides salvage
AL541_13535	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
AL541_13535	PWY-6269	adenosylcobalamin salvage from cobinamide II
AL541_13535	PWY-7964	AL541_13535
AL541_13535	PWY-7965	AL541_13535
AL541_13535	PWY-7966	AL541_13535
AL541_13535	PWY-7967	AL541_13535
AL541_13535	PWY-7968	AL541_13535
AL541_13535	PWY-7969	AL541_13535
AL541_13535	PWY-7970	AL541_13535
AL541_13540	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
AL541_13540	PWY-6269	adenosylcobalamin salvage from cobinamide II
AL541_13540	PWY-7961	AL541_13540
AL541_13540	PWY-7963	AL541_13540
AL541_13540	PWY-7964	AL541_13540
AL541_13540	PWY-7965	AL541_13540
AL541_13540	PWY-7966	AL541_13540
AL541_13540	PWY-7967	AL541_13540
AL541_13540	PWY-7968	AL541_13540
AL541_13540	PWY-7969	AL541_13540
AL541_13540	PWY-7970	AL541_13540
AL541_13540	PWY-7975	AL541_13540
AL541_13545	PWY-6269	adenosylcobalamin salvage from cobinamide II
AL541_13545	PWY-7962	AL541_13545
AL541_13545	PWY-7971	AL541_13545
AL541_13545	PWY-7972	AL541_13545
AL541_13550	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
AL541_13550	PWY-6269	adenosylcobalamin salvage from cobinamide II
AL541_13550	PWY-7961	AL541_13550
AL541_13550	PWY-7963	AL541_13550
AL541_13550	PWY-7964	AL541_13550
AL541_13550	PWY-7965	AL541_13550
AL541_13550	PWY-7966	AL541_13550
AL541_13550	PWY-7967	AL541_13550
AL541_13550	PWY-7968	AL541_13550
AL541_13550	PWY-7969	AL541_13550
AL541_13550	PWY-7970	AL541_13550
AL541_13550	PWY-7975	AL541_13550
AL541_13915	PWY-381	nitrate reduction II (assimilatory)
AL541_13915	PWY-5675	nitrate reduction V (assimilatory)
AL541_13915	PWY-6549	L-glutamine biosynthesis III
AL541_13915	PWY-6963	ammonia assimilation cycle I
AL541_13915	PWY-6964	ammonia assimilation cycle II
AL541_13945	PWY-43	putrescine biosynthesis II
AL541_13950	PWY-43	putrescine biosynthesis II
AL541_14340	PWY-6409	pyoverdine I biosynthesis
AL541_14340	PWY-6562	norspermidine biosynthesis
AL541_14340	PWY-761	rhizobactin 1021 biosynthesis
AL541_14340	PWY-7855	AL541_14340
AL541_14340	PWY-7988	AL541_14340
AL541_14785	PWY-6167	flavin biosynthesis II (archaea)
AL541_14785	PWY-6168	flavin biosynthesis III (fungi)
AL541_14785	PWY-7980	AL541_14785
AL541_14850	PWY-6517	<i>N</i>-acetylglucosamine degradation II
AL541_14850	PWY-6906	chitin derivatives degradation
AL541_14860	PWY-6823	molybdenum cofactor biosynthesis
AL541_14865	PWY-5964	guanylyl molybdenum cofactor biosynthesis
AL541_14865	PWY-7639	bis(guanylyl molybdenum cofactor) biosynthesis
AL541_15190	PWY-3781	aerobic respiration I (cytochrome c)
AL541_15190	PWY-4521	arsenite oxidation I (respiratory)
AL541_15190	PWY-6692	Fe(II) oxidation
AL541_15190	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AL541_15240	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AL541_15240	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AL541_15240	PWY-5989	stearate biosynthesis II (bacteria and plants)
AL541_15240	PWY-5994	palmitate biosynthesis I (animals and fungi)
AL541_15240	PWY-6113	superpathway of mycolate biosynthesis
AL541_15240	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AL541_15240	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AL541_15240	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AL541_15240	PWY-7663	gondoate biosynthesis (anaerobic)
AL541_15240	PWY-7664	oleate biosynthesis IV (anaerobic)
AL541_15240	PWY-7858	AL541_15240
AL541_15240	PWYG-321	mycolate biosynthesis
AL541_15275	PWY-5686	UMP biosynthesis
AL541_15280	PWY-5022	4-aminobutanoate degradation V
AL541_15280	PWY-6728	methylaspartate cycle
AL541_15280	PWY-7126	ethylene biosynthesis IV
AL541_15350	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AL541_15350	PWY-6164	3-dehydroquinate biosynthesis I
AL541_15350	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
AL541_15360	PWY-5194	siroheme biosynthesis
AL541_15360	PWY-5196	factor 430 biosynthesis
AL541_15360	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
AL541_15610	PWY-6703	preQ<sub>0</sub> biosynthesis
AL541_15615	PWY-6703	preQ<sub>0</sub> biosynthesis
AL541_15640	PWY-5108	L-isoleucine biosynthesis V
AL541_15640	PWY-5132	humulone biosynthesis
AL541_15640	PWY-5133	cohumulone biosynthesis
AL541_15640	PWY-6672	<i>cis</i>-genanyl-CoA degradation
AL541_15640	PWY-7118	chitin degradation to ethanol
AL541_15640	PWY-7857	AL541_15640
AL541_15660	PWY-5747	2-methylcitrate cycle II
AL541_15670	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
AL541_15770	PWY-7980	AL541_15770
AL541_15955	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
AL541_15955	PWY-6855	chitin degradation I (archaea)
AL541_15955	PWY-6906	chitin derivatives degradation
AL541_15960	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
AL541_16025	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
AL541_16025	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
AL541_16030	PWY-5913	TCA cycle VI (obligate autotrophs)
AL541_16030	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
AL541_16030	PWY-6638	sulfolactate degradation III
AL541_16030	PWY-6642	(<i>R</i>)-cysteate degradation
AL541_16030	PWY-6643	coenzyme M biosynthesis II
AL541_16030	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AL541_16030	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AL541_16030	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AL541_16130	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
AL541_16130	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
AL541_16260	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
AL541_16670	PWY-5381	pyridine nucleotide cycling (plants)
AL541_16670	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
AL541_16670	PWY-6596	adenosine nucleotides degradation I
AL541_16670	PWY-6606	guanosine nucleotides degradation II
AL541_16670	PWY-6607	guanosine nucleotides degradation I
AL541_16670	PWY-6608	guanosine nucleotides degradation III
AL541_16670	PWY-7185	UTP and CTP dephosphorylation I
AL541_16670	PWY-7821	AL541_16670
AL541_17325	PWY-6012	acyl carrier protein metabolism I
AL541_17325	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
AL541_17325	PWY-6289	petrobactin biosynthesis
AL541_17335	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AL541_17335	PWY-6164	3-dehydroquinate biosynthesis I
AL541_17335	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
AL541_17340	PWY-5901	2,3-dihydroxybenzoate biosynthesis
AL541_17345	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
AL541_17345	PWY-5901	2,3-dihydroxybenzoate biosynthesis
AL541_17345	PWY-6406	salicylate biosynthesis I
AL541_17945	PWY-5392	reductive TCA cycle II
AL541_17945	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AL541_17945	PWY-5690	TCA cycle II (plants and fungi)
AL541_17945	PWY-5913	TCA cycle VI (obligate autotrophs)
AL541_17945	PWY-6728	methylaspartate cycle
AL541_17945	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AL541_17945	PWY-7254	TCA cycle VII (acetate-producers)
AL541_17945	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AL541_17955	PWY-5958	acridone alkaloid biosynthesis
AL541_17955	PWY-6543	4-aminobenzoate biosynthesis
AL541_17955	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
AL541_17955	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
AL541_18030	PWY-5913	TCA cycle VI (obligate autotrophs)
AL541_18030	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
AL541_18030	PWY-6638	sulfolactate degradation III
AL541_18030	PWY-6642	(<i>R</i>)-cysteate degradation
AL541_18030	PWY-6643	coenzyme M biosynthesis II
AL541_18030	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AL541_18030	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AL541_18030	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AL541_18135	PWY-6168	flavin biosynthesis III (fungi)
AL541_18135	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AL541_18135	PWY-7991	AL541_18135
AL541_18175	PWY-5674	nitrate reduction IV (dissimilatory)
AL541_18195	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
AL541_18195	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
AL541_18195	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
AL541_18195	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
AL541_18195	PWY-5871	ubiquinol-9 biosynthesis (eukaryotic)
AL541_18195	PWY-5872	ubiquinol-10 biosynthesis (eukaryotic)
AL541_18195	PWY-5873	ubiquinol-7 biosynthesis (eukaryotic)
AL541_18195	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
AL541_18195	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
AL541_18195	PWY-7233	ubiquinol-6 bypass biosynthesis (eukaryotic)
AL541_18205	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AL541_18205	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AL541_18205	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AL541_18205	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AL541_18205	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AL541_18205	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AL541_18205	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
AL541_18205	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
AL541_18210	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AL541_18210	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AL541_18210	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AL541_18210	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AL541_18210	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AL541_18210	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AL541_18210	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
AL541_18210	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
AL541_18235	PWY-6562	norspermidine biosynthesis
AL541_18245	PWY-6409	pyoverdine I biosynthesis
AL541_18245	PWY-6562	norspermidine biosynthesis
AL541_18245	PWY-761	rhizobactin 1021 biosynthesis
AL541_18245	PWY-7855	AL541_18245
AL541_18245	PWY-7988	AL541_18245
AL541_18270	PWY-5269	cardiolipin biosynthesis II
AL541_18270	PWY-5668	cardiolipin biosynthesis I
AL541_18270	PWY-7817	AL541_18270
AL541_18330	PWY-5958	acridone alkaloid biosynthesis
AL541_18330	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
AL541_18330	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
AL541_18335	PWY-5958	acridone alkaloid biosynthesis
AL541_18335	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
AL541_18335	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
AL541_18380	PWY-6157	autoinducer AI-1 biosynthesis
AL541_18415	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
AL541_18415	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
AL541_18415	PWY-6936	seleno-amino acid biosynthesis
AL541_18415	PWY-702	L-methionine biosynthesis II
AL541_18510	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
AL541_18510	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
AL541_18510	PWY-6936	seleno-amino acid biosynthesis
AL541_18510	PWY-702	L-methionine biosynthesis II
AL541_18650	PWY-5686	UMP biosynthesis
AL541_18650	PWY-7790	AL541_18650
AL541_18650	PWY-7791	AL541_18650
AL541_18675	PWY-7205	CMP phosphorylation
AL541_18715	PWY-1042	glycolysis IV (plant cytosol)
AL541_18715	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AL541_18715	PWY-5484	glycolysis II (from fructose 6-phosphate)
AL541_18715	PWY-5723	Rubisco shunt
AL541_18715	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AL541_18715	PWY-6886	1-butanol autotrophic biosynthesis
AL541_18715	PWY-6901	superpathway of glucose and xylose degradation
AL541_18715	PWY-7003	glycerol degradation to butanol
AL541_18715	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AL541_18715	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AL541_18760	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AL541_18760	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AL541_18760	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AL541_18760	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
AL541_18760	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AL541_18760	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AL541_18770	PWY-6543	4-aminobenzoate biosynthesis
AL541_18785	PWY-5367	petroselinate biosynthesis
AL541_18785	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AL541_18785	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AL541_18785	PWY-5989	stearate biosynthesis II (bacteria and plants)
AL541_18785	PWY-5994	palmitate biosynthesis I (animals and fungi)
AL541_18785	PWY-6113	superpathway of mycolate biosynthesis
AL541_18785	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AL541_18785	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AL541_18785	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AL541_18785	PWY-7663	gondoate biosynthesis (anaerobic)
AL541_18785	PWY-7664	oleate biosynthesis IV (anaerobic)
AL541_18785	PWY-7858	AL541_18785
AL541_18785	PWYG-321	mycolate biosynthesis
AL541_18790	PWY-4381	fatty acid biosynthesis initiation I
AL541_18790	PWY-6799	fatty acid biosynthesis (plant mitochondria)
AL541_18790	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AL541_18795	PWY-4381	fatty acid biosynthesis initiation I
AL541_18860	PWY-7193	pyrimidine ribonucleosides salvage I
AL541_18920	PWY-842	starch degradation I
AL541_18945	PWY-5482	pyruvate fermentation to acetate II
AL541_18945	PWY-5485	pyruvate fermentation to acetate IV
AL541_18945	PWY-5497	purine nucleobases degradation II (anaerobic)
AL541_18950	PWY-1281	sulfoacetaldehyde degradation I
AL541_18950	PWY-5482	pyruvate fermentation to acetate II
AL541_18950	PWY-5485	pyruvate fermentation to acetate IV
AL541_18950	PWY-5497	purine nucleobases degradation II (anaerobic)
AL541_18950	PWY-6637	sulfolactate degradation II
AL541_18990	PWY-6823	molybdenum cofactor biosynthesis
AL541_18990	PWY-7887	AL541_18990
AL541_19000	PWY-6823	molybdenum cofactor biosynthesis
AL541_19010	PWY-6823	molybdenum cofactor biosynthesis
AL541_19040	PWY-5480	pyruvate fermentation to ethanol I
AL541_19040	PWY-5485	pyruvate fermentation to acetate IV
AL541_19040	PWY-5493	reductive monocarboxylic acid cycle
AL541_19080	PWY-5386	methylglyoxal degradation I
AL541_19130	PWY-6854	ethylene biosynthesis III (microbes)
AL541_19150	PWY-3162	L-tryptophan degradation V (side chain pathway)
AL541_19150	PWY-5057	L-valine degradation II
AL541_19150	PWY-5076	L-leucine degradation III
AL541_19150	PWY-5078	L-isoleucine degradation II
AL541_19150	PWY-5079	L-phenylalanine degradation III
AL541_19150	PWY-5082	L-methionine degradation III
AL541_19150	PWY-5480	pyruvate fermentation to ethanol I
AL541_19150	PWY-5486	pyruvate fermentation to ethanol II
AL541_19150	PWY-5751	phenylethanol biosynthesis
AL541_19150	PWY-6313	serotonin degradation
AL541_19150	PWY-6333	acetaldehyde biosynthesis I
AL541_19150	PWY-6342	noradrenaline and adrenaline degradation
AL541_19150	PWY-6587	pyruvate fermentation to ethanol III
AL541_19150	PWY-6802	salidroside biosynthesis
AL541_19150	PWY-6871	3-methylbutanol biosynthesis
AL541_19150	PWY-7013	L-1,2-propanediol degradation
AL541_19150	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AL541_19150	PWY-7118	chitin degradation to ethanol
AL541_19150	PWY-7396	butanol and isobutanol biosynthesis (engineered)
AL541_19165	PWY-2941	L-lysine biosynthesis II
AL541_19165	PWY-2942	L-lysine biosynthesis III
AL541_19165	PWY-5097	L-lysine biosynthesis VI
AL541_19165	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AL541_19165	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
AL541_19165	PWY-6559	spermidine biosynthesis II
AL541_19165	PWY-6562	norspermidine biosynthesis
AL541_19165	PWY-7153	grixazone biosynthesis
AL541_19165	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AL541_19165	PWY-7977	AL541_19165
AL541_19265	PWY-1042	glycolysis IV (plant cytosol)
AL541_19265	PWY-5484	glycolysis II (from fructose 6-phosphate)
AL541_19265	PWY-6901	superpathway of glucose and xylose degradation
AL541_19265	PWY-7003	glycerol degradation to butanol
AL541_19300	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
AL541_19300	PWY-5491	diethylphosphate degradation
AL541_19360	PWY-6605	adenine and adenosine salvage II
AL541_19360	PWY-6610	adenine and adenosine salvage IV
AL541_19360	PWY-7805	AL541_19360
AL541_19360	PWY-7807	AL541_19360
AL541_19385	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AL541_19385	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AL541_19385	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AL541_19385	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
AL541_19400	PWY-2161	folate polyglutamylation
AL541_19405	PWY-4381	fatty acid biosynthesis initiation I
AL541_19405	PWY-5743	3-hydroxypropanoate cycle
AL541_19405	PWY-5744	glyoxylate assimilation
AL541_19405	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AL541_19405	PWY-6722	candicidin biosynthesis
AL541_19425	PWY-2941	L-lysine biosynthesis II
AL541_19425	PWY-2942	L-lysine biosynthesis III
AL541_19425	PWY-5097	L-lysine biosynthesis VI
AL541_19425	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AL541_19425	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
AL541_19425	PWY-6559	spermidine biosynthesis II
AL541_19425	PWY-6562	norspermidine biosynthesis
AL541_19425	PWY-7153	grixazone biosynthesis
AL541_19425	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AL541_19425	PWY-7977	AL541_19425
AL541_19445	PWY-7892	AL541_19445
AL541_19480	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AL541_19510	PWY-1361	benzoyl-CoA degradation I (aerobic)
AL541_19510	PWY-5109	2-methylbutanoate biosynthesis
AL541_19510	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
AL541_19510	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
AL541_19510	PWY-5177	glutaryl-CoA degradation
AL541_19510	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AL541_19510	PWY-6435	4-hydroxybenzoate biosynthesis V
AL541_19510	PWY-6583	pyruvate fermentation to butanol I
AL541_19510	PWY-6863	pyruvate fermentation to hexanol
AL541_19510	PWY-6883	pyruvate fermentation to butanol II
AL541_19510	PWY-6944	androstenedione degradation
AL541_19510	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
AL541_19510	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
AL541_19510	PWY-7007	methyl ketone biosynthesis
AL541_19510	PWY-7046	4-coumarate degradation (anaerobic)
AL541_19510	PWY-7094	fatty acid salvage
AL541_19510	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
AL541_19510	PWY-735	jasmonic acid biosynthesis
AL541_19510	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
AL541_19510	PWY-7606	docosahexaenoate biosynthesis III (mammals)
AL541_19510	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
AL541_19510	PWY-7656	<i>Spodoptera littoralis</i> pheromone biosynthesis
AL541_19510	PWY-7726	AL541_19510
AL541_19510	PWY-7778	AL541_19510
AL541_19510	PWY-7779	AL541_19510
AL541_19515	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
AL541_19515	PWY-6435	4-hydroxybenzoate biosynthesis V
AL541_19515	PWY-6863	pyruvate fermentation to hexanol
AL541_19515	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
AL541_19515	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
AL541_19515	PWY-6948	sitosterol degradation to androstenedione
AL541_19515	PWY-7094	fatty acid salvage
AL541_19515	PWY-7288	fatty acid &beta;-oxidation (peroxisome, yeast)
AL541_19515	PWY-7337	10-<i>cis</i>-heptadecenoyl-CoA degradation (yeast)
AL541_19515	PWY-7338	10-<i>trans</i>-heptadecenoyl-CoA degradation (reductase-dependent, yeast)
AL541_19515	PWY-7339	10-<i>trans</i>-heptadecenoyl-CoA degradation (MFE-dependent, yeast)
AL541_19515	PWY-7340	9-<i>cis</i>, 11-<i>trans</i>-octadecadienoyl-CoA degradation (isomerase-dependent, yeast)
AL541_19515	PWY-735	jasmonic acid biosynthesis
AL541_19515	PWY-7606	docosahexaenoate biosynthesis III (mammals)
AL541_19515	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
AL541_19515	PWY-7726	AL541_19515
AL541_19710	PWY-7980	AL541_19710
AL541_19840	PWY-2941	L-lysine biosynthesis II
AL541_19840	PWY-2942	L-lysine biosynthesis III
AL541_19840	PWY-5097	L-lysine biosynthesis VI
AL541_19870	PWY-4202	arsenate detoxification I (glutaredoxin)
AL541_19870	PWY-4621	arsenate detoxification II (glutaredoxin)
AL541_19875	PWY-7731	AL541_19875
AL541_19895	PWY-7183	pyrimidine nucleobases salvage I
AL541_19900	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AL541_19900	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AL541_19900	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AL541_19905	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AL541_19905	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
AL541_19915	PWY-6478	GDP-D-<i>glycero</i>-&alpha;-D-<i>manno</i>-heptose biosynthesis
AL541_19920	PWY-7094	fatty acid salvage
AL541_19920	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
AL541_19965	PWY-5386	methylglyoxal degradation I
AL541_20000	PWY-4381	fatty acid biosynthesis initiation I
AL541_20000	PWY-5743	3-hydroxypropanoate cycle
AL541_20000	PWY-5744	glyoxylate assimilation
AL541_20000	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AL541_20000	PWY-6722	candicidin biosynthesis
AL541_20025	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AL541_20025	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AL541_20025	PWY-5989	stearate biosynthesis II (bacteria and plants)
AL541_20025	PWY-5994	palmitate biosynthesis I (animals and fungi)
AL541_20025	PWY-6113	superpathway of mycolate biosynthesis
AL541_20025	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AL541_20025	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AL541_20025	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AL541_20025	PWY-7663	gondoate biosynthesis (anaerobic)
AL541_20025	PWY-7664	oleate biosynthesis IV (anaerobic)
AL541_20025	PWY-7858	AL541_20025
AL541_20025	PWYG-321	mycolate biosynthesis
AL541_20050	PWY-7560	methylerythritol phosphate pathway II
AL541_20055	PWY-5667	CDP-diacylglycerol biosynthesis I
AL541_20055	PWY-5981	CDP-diacylglycerol biosynthesis III
AL541_20055	PWY-7817	AL541_20055
AL541_20085	PWY-7799	AL541_20085
AL541_20085	PWY-7800	AL541_20085
AL541_20140	PWY-4381	fatty acid biosynthesis initiation I
AL541_20215	PWY-6855	chitin degradation I (archaea)
AL541_20215	PWY-6902	chitin degradation II
AL541_20215	PWY-7822	AL541_20215
AL541_20350	PWY-6654	phosphopantothenate biosynthesis III
AL541_20360	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
AL541_20395	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AL541_20490	PWY-4261	glycerol degradation I
AL541_20500	PWY-4261	glycerol degradation I
AL541_20500	PWY-6118	glycerol-3-phosphate shuttle
AL541_20500	PWY-6952	glycerophosphodiester degradation
AL541_20610	PWY-4202	arsenate detoxification I (glutaredoxin)
AL541_20610	PWY-5532	adenosine nucleotides degradation IV
AL541_20610	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
AL541_20610	PWY-6608	guanosine nucleotides degradation III
AL541_20610	PWY-6609	adenine and adenosine salvage III
AL541_20610	PWY-6611	adenine and adenosine salvage V
AL541_20610	PWY-6620	guanine and guanosine salvage
AL541_20610	PWY-6627	salinosporamide A biosynthesis
AL541_20610	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
AL541_20610	PWY-7179	purine deoxyribonucleosides degradation I
AL541_20610	PWY-7179-1	purine deoxyribonucleosides degradation
AL541_20615	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
AL541_20620	PWY-7181	pyrimidine deoxyribonucleosides degradation
AL541_20625	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
AL541_20765	PWY-6749	CMP-legionaminate biosynthesis I
AL541_20770	PWY-6614	tetrahydrofolate biosynthesis
AL541_20800	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AL541_20800	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AL541_20835	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AL541_20880	PWY-6788	cellulose degradation II (fungi)
AL541_20890	PWY-6902	chitin degradation II
AL541_20890	PWY-7822	AL541_20890
AL541_20890	PWY-7883	AL541_20890
AL541_20900	PWY-6749	CMP-legionaminate biosynthesis I
AL541_20935	PWY-5747	2-methylcitrate cycle II
AL541_20945	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AL541_20945	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
AL541_20945	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AL541_20945	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AL541_20975	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
AL541_20975	PWY-6148	tetrahydromethanopterin biosynthesis
AL541_20975	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
AL541_20975	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AL541_20975	PWY-7852	AL541_20975
AL541_20975	PWY-7853	AL541_20975
AL541_20980	PWY-6654	phosphopantothenate biosynthesis III
AL541_21015	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
AL541_21015	PWY-5743	3-hydroxypropanoate cycle
AL541_21015	PWY-5744	glyoxylate assimilation
AL541_21015	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AL541_21015	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AL541_21015	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AL541_21015	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AL541_21020	PWY-6599	guanine and guanosine salvage II
AL541_21020	PWY-6609	adenine and adenosine salvage III
AL541_21020	PWY-6610	adenine and adenosine salvage IV
AL541_21020	PWY-6620	guanine and guanosine salvage
AL541_21030	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
AL541_21030	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
AL541_21040	PWY-6891	thiazole biosynthesis II (Bacillus)
AL541_21040	PWY-6892	thiazole biosynthesis I (E. coli)
AL541_21040	PWY-7560	methylerythritol phosphate pathway II
AL541_21055	PWY-5316	nicotine biosynthesis
AL541_21055	PWY-5381	pyridine nucleotide cycling (plants)
AL541_21055	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
AL541_21055	PWY-7342	superpathway of nicotine biosynthesis
AL541_21080	PWY-7851	AL541_21080
AL541_21100	PWY-6829	tRNA methylation (yeast)
AL541_21100	PWY-7285	methylwyosine biosynthesis
AL541_21100	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
AL541_21130	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
AL541_21130	PWY-6153	autoinducer AI-2 biosynthesis I
AL541_21130	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
AL541_21140	PWY-6840	homoglutathione biosynthesis
AL541_21140	PWY-7255	ergothioneine biosynthesis I (bacteria)
AL541_21230	PWY-2941	L-lysine biosynthesis II
AL541_21230	PWY-2942	L-lysine biosynthesis III
AL541_21230	PWY-5097	L-lysine biosynthesis VI
AL541_21230	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
AL541_21230	PWY-6559	spermidine biosynthesis II
AL541_21230	PWY-6562	norspermidine biosynthesis
AL541_21230	PWY-7153	grixazone biosynthesis
AL541_21230	PWY-7977	AL541_21230
AL541_21275	PWY-5381	pyridine nucleotide cycling (plants)
AL541_21275	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
AL541_21275	PWY-6596	adenosine nucleotides degradation I
AL541_21275	PWY-6606	guanosine nucleotides degradation II
AL541_21275	PWY-6607	guanosine nucleotides degradation I
AL541_21275	PWY-6608	guanosine nucleotides degradation III
AL541_21275	PWY-7185	UTP and CTP dephosphorylation I
AL541_21275	PWY-7821	AL541_21275
AL541_21285	PWY-7560	methylerythritol phosphate pathway II
AL541_21290	PWY-7560	methylerythritol phosphate pathway II
AL541_21300	PWY-1042	glycolysis IV (plant cytosol)
AL541_21300	PWY-1622	formaldehyde assimilation I (serine pathway)
AL541_21300	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AL541_21300	PWY-5484	glycolysis II (from fructose 6-phosphate)
AL541_21300	PWY-5723	Rubisco shunt
AL541_21300	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AL541_21300	PWY-6886	1-butanol autotrophic biosynthesis
AL541_21300	PWY-6901	superpathway of glucose and xylose degradation
AL541_21300	PWY-7003	glycerol degradation to butanol
AL541_21300	PWY-7124	ethylene biosynthesis V (engineered)
AL541_21300	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AL541_21305	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
AL541_21305	PWY-7177	UTP and CTP dephosphorylation II
AL541_21305	PWY-7185	UTP and CTP dephosphorylation I
AL541_21340	PWY-6012	acyl carrier protein metabolism I
AL541_21340	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
AL541_21340	PWY-6289	petrobactin biosynthesis
AL541_21400	PWY-5316	nicotine biosynthesis
AL541_21400	PWY-7342	superpathway of nicotine biosynthesis
AL541_21465	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AL541_21465	PWY-5723	Rubisco shunt
AL541_21500	PWY-1042	glycolysis IV (plant cytosol)
AL541_21500	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AL541_21500	PWY-5484	glycolysis II (from fructose 6-phosphate)
AL541_21500	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AL541_21500	PWY-7385	1,3-propanediol biosynthesis (engineered)
AL541_21505	PWY-1042	glycolysis IV (plant cytosol)
AL541_21505	PWY-5484	glycolysis II (from fructose 6-phosphate)
AL541_21505	PWY-6886	1-butanol autotrophic biosynthesis
AL541_21505	PWY-6901	superpathway of glucose and xylose degradation
AL541_21505	PWY-7003	glycerol degradation to butanol
AL541_21525	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AL541_21525	PWY-5723	Rubisco shunt
AL541_21525	PWY-6891	thiazole biosynthesis II (Bacillus)
AL541_21525	PWY-6892	thiazole biosynthesis I (E. coli)
AL541_21525	PWY-6901	superpathway of glucose and xylose degradation
AL541_21525	PWY-7560	methylerythritol phosphate pathway II
AL541_21535	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
AL541_21535	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
AL541_21585	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AL541_21590	PWY-3341	L-proline biosynthesis III
AL541_21590	PWY-4981	L-proline biosynthesis II (from arginine)
AL541_21590	PWY-6344	L-ornithine degradation II (Stickland reaction)
AL541_21955	PWY-4981	L-proline biosynthesis II (from arginine)
AL541_21960	PWY-4981	L-proline biosynthesis II (from arginine)
AL541_21960	PWY-4984	urea cycle
AL541_21960	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AL541_21970	PWY-5686	UMP biosynthesis
AL541_21970	PWY-7790	AL541_21970
AL541_21970	PWY-7791	AL541_21970
AL541_21985	PWY-5667	CDP-diacylglycerol biosynthesis I
AL541_21985	PWY-5981	CDP-diacylglycerol biosynthesis III
AL541_21985	PWY-6453	stigma estolide biosynthesis
AL541_21985	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
AL541_21985	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
AL541_21985	PWY-7587	oleate biosynthesis III (cyanobacteria)
AL541_21985	PWY-7589	palmitoleate biosynthesis III (cyanobacteria)
AL541_21985	PWY-7782	AL541_21985
AL541_21990	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AL541_21990	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AL541_21990	PWY-7953	AL541_21990
AL541_22250	PWY-3801	sucrose degradation II (sucrose synthase)
AL541_22250	PWY-6527	stachyose degradation
AL541_22250	PWY-7238	sucrose biosynthesis II
AL541_22250	PWY-7343	UDP-glucose biosynthesis
AL541_22250	PWY-7817	AL541_22250
AL541_22265	PWY-6832	2-aminoethylphosphonate degradation II
AL541_22275	PWY-2941	L-lysine biosynthesis II
AL541_22275	PWY-2942	L-lysine biosynthesis III
AL541_22275	PWY-5097	L-lysine biosynthesis VI
AL541_22275	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
AL541_22275	PWY-6559	spermidine biosynthesis II
AL541_22275	PWY-6562	norspermidine biosynthesis
AL541_22275	PWY-7153	grixazone biosynthesis
AL541_22275	PWY-7977	AL541_22275
AL541_22280	PWY-2201	folate transformations I
AL541_22280	PWY-3841	folate transformations II
AL541_22280	PWY-7977	AL541_22280
AL541_22350	PWY-6683	sulfate reduction III (assimilatory)
AL541_22355	PWY-6683	sulfate reduction III (assimilatory)
AL541_22390	PWY-3801	sucrose degradation II (sucrose synthase)
AL541_22390	PWY-5054	sorbitol biosynthesis I
AL541_22390	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
AL541_22390	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
AL541_22390	PWY-5659	GDP-mannose biosynthesis
AL541_22390	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AL541_22390	PWY-621	sucrose degradation III (sucrose invertase)
AL541_22390	PWY-622	starch biosynthesis
AL541_22390	PWY-6981	chitin biosynthesis
AL541_22390	PWY-6992	1,5-anhydrofructose degradation
AL541_22390	PWY-7238	sucrose biosynthesis II
AL541_22390	PWY-7347	sucrose biosynthesis III
AL541_22390	PWY-7385	1,3-propanediol biosynthesis (engineered)
AL541_22400	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AL541_22435	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AL541_22435	PWY-5723	Rubisco shunt
AL541_22450	PWY-6164	3-dehydroquinate biosynthesis I
AL541_22455	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AL541_22485	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AL541_22485	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
AL541_22485	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AL541_22485	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AL541_22500	PWY-6854	ethylene biosynthesis III (microbes)
AL541_22510	PWY-4983	L-citrulline-nitric oxide cycle
AL541_22510	PWY-4984	urea cycle
AL541_22510	PWY-5	canavanine biosynthesis
AL541_22510	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AL541_22510	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AL541_22515	PWY-4983	L-citrulline-nitric oxide cycle
AL541_22515	PWY-4984	urea cycle
AL541_22515	PWY-5	canavanine biosynthesis
AL541_22515	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AL541_22515	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AL541_22520	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AL541_22520	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AL541_22525	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AL541_22525	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AL541_22530	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AL541_22535	PWY-1622	formaldehyde assimilation I (serine pathway)
AL541_22535	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
AL541_22535	PWY-5913	TCA cycle VI (obligate autotrophs)
AL541_22535	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AL541_22535	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
AL541_22535	PWY-6549	L-glutamine biosynthesis III
AL541_22535	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AL541_22535	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AL541_22535	PWY-7124	ethylene biosynthesis V (engineered)
AL541_22545	PWY-2201	folate transformations I
AL541_22545	PWY-3841	folate transformations II
AL541_22550	PWY-2941	L-lysine biosynthesis II
AL541_22550	PWY-2942	L-lysine biosynthesis III
AL541_22550	PWY-5097	L-lysine biosynthesis VI
AL541_22550	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
AL541_22550	PWY-6559	spermidine biosynthesis II
AL541_22550	PWY-6562	norspermidine biosynthesis
AL541_22550	PWY-7153	grixazone biosynthesis
AL541_22550	PWY-7977	AL541_22550
AL541_22555	PWY-801	L-homocysteine and L-cysteine interconversion
AL541_22660	PWY-7731	AL541_22660
AL541_22685	PWY-5723	Rubisco shunt
AL541_22715	PWY-5958	acridone alkaloid biosynthesis
AL541_22715	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
AL541_22715	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
AL541_22735	PWY-181	photorespiration
AL541_22770	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AL541_22800	PWY-2781	<i>cis</i>-zeatin biosynthesis
AL541_22825	PWY-6700	queuosine biosynthesis
AL541_22900	PWY-5669	phosphatidylethanolamine biosynthesis I
AL541_22915	PWY-1042	glycolysis IV (plant cytosol)
AL541_22915	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AL541_22915	PWY-5484	glycolysis II (from fructose 6-phosphate)
AL541_22915	PWY-5723	Rubisco shunt
AL541_22915	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AL541_22915	PWY-6886	1-butanol autotrophic biosynthesis
AL541_22915	PWY-6901	superpathway of glucose and xylose degradation
AL541_22915	PWY-7003	glycerol degradation to butanol
AL541_22915	PWY-7124	ethylene biosynthesis V (engineered)
AL541_22915	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AL541_22930	PWY-5667	CDP-diacylglycerol biosynthesis I
AL541_22930	PWY-5981	CDP-diacylglycerol biosynthesis III
AL541_22930	PWY-7902	AL541_22930
AL541_22935	PWY-6936	seleno-amino acid biosynthesis
AL541_22935	PWY-7274	D-cycloserine biosynthesis
AL541_22935	PWY-7870	AL541_22935
AL541_22965	PWY-5392	reductive TCA cycle II
AL541_22965	PWY-5913	TCA cycle VI (obligate autotrophs)
AL541_22965	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AL541_22970	PWY-3781	aerobic respiration I (cytochrome c)
AL541_22970	PWY-4302	aerobic respiration III (alternative oxidase pathway)
AL541_22970	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AL541_22970	PWY-5690	TCA cycle II (plants and fungi)
AL541_22970	PWY-6728	methylaspartate cycle
AL541_22970	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AL541_22970	PWY-7254	TCA cycle VII (acetate-producers)
AL541_22970	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AL541_23025	PWY-1042	glycolysis IV (plant cytosol)
AL541_23025	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AL541_23025	PWY-5484	glycolysis II (from fructose 6-phosphate)
AL541_23025	PWY-7385	1,3-propanediol biosynthesis (engineered)
AL541_23050	PWY-6854	ethylene biosynthesis III (microbes)
AL541_23065	PWY-5392	reductive TCA cycle II
AL541_23065	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AL541_23065	PWY-5690	TCA cycle II (plants and fungi)
AL541_23065	PWY-5913	TCA cycle VI (obligate autotrophs)
AL541_23065	PWY-6728	methylaspartate cycle
AL541_23065	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AL541_23065	PWY-7254	TCA cycle VII (acetate-producers)
AL541_23065	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AL541_23110	PWY-5392	reductive TCA cycle II
AL541_23110	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AL541_23110	PWY-5690	TCA cycle II (plants and fungi)
AL541_23110	PWY-5913	TCA cycle VI (obligate autotrophs)
AL541_23110	PWY-6728	methylaspartate cycle
AL541_23110	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AL541_23110	PWY-7254	TCA cycle VII (acetate-producers)
AL541_23110	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AL541_23135	PWY-5108	L-isoleucine biosynthesis V
AL541_23135	PWY-5132	humulone biosynthesis
AL541_23135	PWY-5133	cohumulone biosynthesis
AL541_23135	PWY-6672	<i>cis</i>-genanyl-CoA degradation
AL541_23135	PWY-7118	chitin degradation to ethanol
AL541_23135	PWY-7857	AL541_23135
AL541_23140	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AL541_23140	PWY-6416	quinate degradation II
AL541_23140	PWY-6707	gallate biosynthesis
AL541_23265	PWY-6123	inosine-5'-phosphate biosynthesis I
AL541_23265	PWY-6124	inosine-5'-phosphate biosynthesis II
AL541_23265	PWY-7234	inosine-5'-phosphate biosynthesis III
AL541_23270	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AL541_23270	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AL541_23270	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AL541_23305	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
AL541_23305	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
AL541_23305	PWY-7766	AL541_23305
AL541_23310	PWY-5381	pyridine nucleotide cycling (plants)
AL541_23310	PWY-7761	AL541_23310
AL541_23395	PWY-3961	phosphopantothenate biosynthesis II
AL541_23400	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
AL541_23400	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
AL541_23405	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AL541_23405	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AL541_23405	PWY-7953	AL541_23405
AL541_23480	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AL541_23480	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AL541_23485	PWY-6482	diphthamide biosynthesis (archaea)
AL541_23485	PWY-7546	diphthamide biosynthesis (eukaryotes)
AL541_23510	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
AL541_23540	PWY-5667	CDP-diacylglycerol biosynthesis I
AL541_23540	PWY-6453	stigma estolide biosynthesis
AL541_23540	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
AL541_23540	PWY-7587	oleate biosynthesis III (cyanobacteria)
AL541_23550	PWY-5755	4-hydroxybenzoate biosynthesis II (microbes)
AL541_23550	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
AL541_23550	PWY-6148	tetrahydromethanopterin biosynthesis
AL541_23550	PWY-7742	AL541_23550
AL541_23550	PWY-7745	AL541_23550
AL541_23550	PWY-7929	AL541_23550
AL541_23550	PWY-7934	AL541_23550
AL541_23550	PWY-7935	AL541_23550
AL541_23565	PWY-5350	thiosulfate disproportionation III (rhodanese)
AL541_23565	PWY-7927	AL541_23565
AL541_23650	PWY-1042	glycolysis IV (plant cytosol)
AL541_23650	PWY-5484	glycolysis II (from fructose 6-phosphate)
AL541_23650	PWY-6901	superpathway of glucose and xylose degradation
AL541_23650	PWY-7003	glycerol degradation to butanol
AL541_23715	PWY-2941	L-lysine biosynthesis II
AL541_23715	PWY-5097	L-lysine biosynthesis VI
AL541_23720	PWY-2941	L-lysine biosynthesis II
AL541_23720	PWY-2942	L-lysine biosynthesis III
AL541_23720	PWY-5097	L-lysine biosynthesis VI
AL541_23740	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AL541_23740	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
AL541_23745	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AL541_23745	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
AL541_23805	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
AL541_23805	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
AL541_23805	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
AL541_23805	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
AL541_23805	PWY-6978	plastoquinol-9 biosynthesis II
AL541_23815	PWY-7980	AL541_23815
AL541_23875	PWY-4041	&gamma;-glutamyl cycle
AL541_23875	PWY-4061	glutathione-mediated detoxification I
AL541_23875	PWY-5826	hypoglycin biosynthesis
AL541_23875	PWY-6842	glutathione-mediated detoxification II
AL541_23875	PWY-7112	4-hydroxy-2-nonenal detoxification
AL541_23875	PWY-7559	glutathione degradation (DUG pathway - yeast)
AL541_23930	PWY-6892	thiazole biosynthesis I (E. coli)
AL541_23930	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
AL541_23935	PWY-6891	thiazole biosynthesis II (Bacillus)
AL541_23935	PWY-6892	thiazole biosynthesis I (E. coli)
AL541_23950	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
AL541_23950	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
AL541_23950	PWY-6897	thiamin salvage II
AL541_23950	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
AL541_23950	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
AL541_23950	PWY-7356	thiamin salvage IV (yeast)
AL541_23950	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
AL541_23955	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
AL541_24020	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AL541_24025	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
AL541_24035	PWY-6123	inosine-5'-phosphate biosynthesis I
AL541_24035	PWY-7234	inosine-5'-phosphate biosynthesis III
AL541_24150	PWY-5101	L-isoleucine biosynthesis II
AL541_24150	PWY-5103	L-isoleucine biosynthesis III
AL541_24150	PWY-5104	L-isoleucine biosynthesis IV
AL541_24150	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
AL541_24150	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
AL541_24150	PWY-6389	(<i>S</i>)-acetoin biosynthesis
AL541_24150	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AL541_24160	PWY-5057	L-valine degradation II
AL541_24160	PWY-5076	L-leucine degradation III
AL541_24160	PWY-5078	L-isoleucine degradation II
AL541_24160	PWY-5101	L-isoleucine biosynthesis II
AL541_24160	PWY-5103	L-isoleucine biosynthesis III
AL541_24160	PWY-5104	L-isoleucine biosynthesis IV
AL541_24160	PWY-5108	L-isoleucine biosynthesis V
AL541_24160	PWY-7767	AL541_24160
AL541_24165	PWY-5101	L-isoleucine biosynthesis II
AL541_24165	PWY-5103	L-isoleucine biosynthesis III
AL541_24165	PWY-5104	L-isoleucine biosynthesis IV
AL541_24165	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AL541_24195	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
AL541_24205	PWY-7980	AL541_24205
AL541_24215	PWY-7980	AL541_24215
AL541_24405	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
AL541_24405	PWY-6435	4-hydroxybenzoate biosynthesis V
AL541_24405	PWY-6863	pyruvate fermentation to hexanol
AL541_24405	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
AL541_24405	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
AL541_24405	PWY-6948	sitosterol degradation to androstenedione
AL541_24405	PWY-7094	fatty acid salvage
AL541_24405	PWY-7288	fatty acid &beta;-oxidation (peroxisome, yeast)
AL541_24405	PWY-7337	10-<i>cis</i>-heptadecenoyl-CoA degradation (yeast)
AL541_24405	PWY-7338	10-<i>trans</i>-heptadecenoyl-CoA degradation (reductase-dependent, yeast)
AL541_24405	PWY-7339	10-<i>trans</i>-heptadecenoyl-CoA degradation (MFE-dependent, yeast)
AL541_24405	PWY-7340	9-<i>cis</i>, 11-<i>trans</i>-octadecadienoyl-CoA degradation (isomerase-dependent, yeast)
AL541_24405	PWY-735	jasmonic acid biosynthesis
AL541_24405	PWY-7606	docosahexaenoate biosynthesis III (mammals)
AL541_24405	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
AL541_24405	PWY-7726	AL541_24405
AL541_24410	PWY-1361	benzoyl-CoA degradation I (aerobic)
AL541_24410	PWY-5109	2-methylbutanoate biosynthesis
AL541_24410	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
AL541_24410	PWY-5137	fatty acid &beta;-oxidation III (unsaturated, odd number)
AL541_24410	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
AL541_24410	PWY-5177	glutaryl-CoA degradation
AL541_24410	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AL541_24410	PWY-6435	4-hydroxybenzoate biosynthesis V
AL541_24410	PWY-6583	pyruvate fermentation to butanol I
AL541_24410	PWY-6837	fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent)
AL541_24410	PWY-6863	pyruvate fermentation to hexanol
AL541_24410	PWY-6883	pyruvate fermentation to butanol II
AL541_24410	PWY-6944	androstenedione degradation
AL541_24410	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
AL541_24410	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
AL541_24410	PWY-7007	methyl ketone biosynthesis
AL541_24410	PWY-7046	4-coumarate degradation (anaerobic)
AL541_24410	PWY-7094	fatty acid salvage
AL541_24410	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
AL541_24410	PWY-7291	oleate &beta;-oxidation (isomerase-dependent, yeast)
AL541_24410	PWY-7292	oleate &beta;-oxidation (thioesterase-dependent, yeast)
AL541_24410	PWY-7307	oleate &beta;-oxidation (reductase-dependent, yeast)
AL541_24410	PWY-7337	10-<i>cis</i>-heptadecenoyl-CoA degradation (yeast)
AL541_24410	PWY-7338	10-<i>trans</i>-heptadecenoyl-CoA degradation (reductase-dependent, yeast)
AL541_24410	PWY-7340	9-<i>cis</i>, 11-<i>trans</i>-octadecadienoyl-CoA degradation (isomerase-dependent, yeast)
AL541_24410	PWY-735	jasmonic acid biosynthesis
AL541_24410	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
AL541_24410	PWY-7606	docosahexaenoate biosynthesis III (mammals)
AL541_24410	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
AL541_24410	PWY-7656	<i>Spodoptera littoralis</i> pheromone biosynthesis
AL541_24410	PWY-7726	AL541_24410
AL541_24410	PWY-7778	AL541_24410
AL541_24410	PWY-7779	AL541_24410
AL541_24470	PWY-5103	L-isoleucine biosynthesis III
AL541_24470	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AL541_24615	PWY-5101	L-isoleucine biosynthesis II
AL541_24615	PWY-5103	L-isoleucine biosynthesis III
AL541_24615	PWY-5104	L-isoleucine biosynthesis IV
AL541_24615	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AL541_24620	PWY-5530	sorbitol biosynthesis II
AL541_24620	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AL541_24630	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AL541_24630	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
AL541_24630	PWY-7242	D-fructuronate degradation
AL541_24630	PWY-7310	D-glucosaminate degradation
AL541_24630	PWY-7562	3,6-anhydro-&alpha;-L-galactopyranose degradation
AL541_24635	PWY-4202	arsenate detoxification I (glutaredoxin)
AL541_24635	PWY-5532	adenosine nucleotides degradation IV
AL541_24635	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
AL541_24635	PWY-6608	guanosine nucleotides degradation III
AL541_24635	PWY-6609	adenine and adenosine salvage III
AL541_24635	PWY-6611	adenine and adenosine salvage V
AL541_24635	PWY-6620	guanine and guanosine salvage
AL541_24635	PWY-6627	salinosporamide A biosynthesis
AL541_24635	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
AL541_24635	PWY-7179	purine deoxyribonucleosides degradation I
AL541_24635	PWY-7179-1	purine deoxyribonucleosides degradation
AL541_24645	PWY-4081	glutathione redox reactions I
AL541_24780	PWY-5839	menaquinol-7 biosynthesis
AL541_24780	PWY-5844	menaquinol-9 biosynthesis
AL541_24780	PWY-5849	menaquinol-6 biosynthesis
AL541_24780	PWY-5890	menaquinol-10 biosynthesis
AL541_24780	PWY-5891	menaquinol-11 biosynthesis
AL541_24780	PWY-5892	menaquinol-12 biosynthesis
AL541_24780	PWY-5895	menaquinol-13 biosynthesis
AL541_24825	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AL541_24825	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
AL541_24875	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
AL541_24880	PWY-6609	adenine and adenosine salvage III
AL541_24880	PWY-6611	adenine and adenosine salvage V
AL541_24880	PWY-7179	purine deoxyribonucleosides degradation I
AL541_24880	PWY-7179-1	purine deoxyribonucleosides degradation
AL541_24905	PWY-381	nitrate reduction II (assimilatory)
AL541_24905	PWY-5675	nitrate reduction V (assimilatory)
AL541_24905	PWY-6549	L-glutamine biosynthesis III
AL541_24905	PWY-6963	ammonia assimilation cycle I
AL541_24905	PWY-6964	ammonia assimilation cycle II
AL541_24945	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AL541_24945	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AL541_25040	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AL541_25105	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
AL541_25200	PWY-5686	UMP biosynthesis
AL541_25200	PWY-7790	AL541_25200
AL541_25200	PWY-7791	AL541_25200
AL541_25215	PWY-7851	AL541_25215
AL541_25255	PWY-7851	AL541_25255
AL541_25280	PWY-7039	phosphatidate metabolism, as a signaling molecule
AL541_25280	PWY-7817	AL541_25280
AL541_25285	PWY-7675	Kdo transfer to lipid IV<sub>A</sub> II
AL541_25285	PWY-7676	Kdo8N transfer to lipid IV<sub>A</sub>
AL541_25290	PWY-3221	dTDP-L-rhamnose biosynthesis II
AL541_25290	PWY-6808	dTDP-D-forosamine biosynthesis
AL541_25290	PWY-6942	dTDP-D-desosamine biosynthesis
AL541_25290	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
AL541_25290	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
AL541_25290	PWY-6974	dTDP-L-olivose biosynthesis
AL541_25290	PWY-6976	dTDP-L-mycarose biosynthesis
AL541_25290	PWY-7104	dTDP-L-megosamine biosynthesis
AL541_25290	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
AL541_25290	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
AL541_25290	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
AL541_25290	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
AL541_25290	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
AL541_25290	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
AL541_25290	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
AL541_25290	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
AL541_25290	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
AL541_25290	PWY-7688	AL541_25290
AL541_25290	PWY-7814	AL541_25290
AL541_25295	PWY-3221	dTDP-L-rhamnose biosynthesis II
AL541_25295	PWY-6808	dTDP-D-forosamine biosynthesis
AL541_25295	PWY-6942	dTDP-D-desosamine biosynthesis
AL541_25295	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
AL541_25295	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
AL541_25295	PWY-6974	dTDP-L-olivose biosynthesis
AL541_25295	PWY-6976	dTDP-L-mycarose biosynthesis
AL541_25295	PWY-7104	dTDP-L-megosamine biosynthesis
AL541_25295	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
AL541_25295	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
AL541_25295	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
AL541_25295	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
AL541_25295	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
AL541_25295	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
AL541_25295	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
AL541_25295	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
AL541_25295	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
AL541_25295	PWY-7688	AL541_25295
AL541_25295	PWY-7814	AL541_25295
AL541_25315	PWY-4381	fatty acid biosynthesis initiation I
AL541_25345	PWY-7675	Kdo transfer to lipid IV<sub>A</sub> II
AL541_25440	PWY-5738	GDP-6-deoxy-D-talose biosynthesis
AL541_25440	PWY-5739	GDP-D-perosamine biosynthesis
AL541_25440	PWY-5740	GDP-L-colitose biosynthesis
AL541_25440	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
AL541_25440	PWY-7573	GDP-mycosamine biosynthesis
AL541_25445	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
AL541_25455	PWY-5659	GDP-mannose biosynthesis
AL541_25455	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
AL541_25460	PWY-6749	CMP-legionaminate biosynthesis I
AL541_25465	PWY-3861	mannitol degradation II
AL541_25465	PWY-3881	mannitol biosynthesis
AL541_25465	PWY-5659	GDP-mannose biosynthesis
AL541_25465	PWY-6992	1,5-anhydrofructose degradation
AL541_25465	PWY-7456	mannan degradation
AL541_25465	PWY-7586	&beta;-1,4-D-mannosyl-<i>N</i>-acetyl-D-glucosamine degradation
AL541_25465	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
AL541_25490	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
AL541_25490	PWY-7820	AL541_25490
AL541_25495	PWY-3801	sucrose degradation II (sucrose synthase)
AL541_25495	PWY-6527	stachyose degradation
AL541_25495	PWY-7238	sucrose biosynthesis II
AL541_25495	PWY-7343	UDP-glucose biosynthesis
AL541_25495	PWY-7817	AL541_25495
AL541_25505	PWY-1042	glycolysis IV (plant cytosol)
AL541_25505	PWY-5484	glycolysis II (from fructose 6-phosphate)
AL541_25505	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AL541_25505	PWY-7003	glycerol degradation to butanol