locus-tag class description K01M1_00010 PF11638 DnaA N-terminal domain K01M1_00010 PF08299 Bacterial dnaA protein helix-turn-helix K01M1_00010 PF00308 Bacterial dnaA protein K01M1_00020 PF02767 DNA polymerase III beta subunit, central domain K01M1_00020 PF00712 DNA polymerase III beta subunit, N-terminal domain K01M1_00020 PF02768 DNA polymerase III beta subunit, C-terminal domain K01M1_00030 PF02463 RecF/RecN/SMC N terminal domain K01M1_00040 PF01751 Toprim domain K01M1_00040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K01M1_00040 PF18053 DNA gyrase B subunit insert domain K01M1_00040 PF00986 DNA gyrase B subunit, carboxyl terminus K01M1_00040 PF00204 DNA gyrase B K01M1_00070 PF00011 Hsp20/alpha crystallin family K01M1_00080 PF00155 Aminotransferase class I and II K01M1_00090 PF00128 Alpha amylase, catalytic domain K01M1_00100 PF02092 Glycyl-tRNA synthetase beta subunit K01M1_00100 PF05746 DALR anticodon binding domain K01M1_00110 PF02091 Glycyl-tRNA synthetase alpha subunit K01M1_00120 PF01169 Uncharacterized protein family UPF0016 K01M1_00140 PF01206 Sulfurtransferase TusA K01M1_00160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K01M1_00160 PF03466 LysR substrate binding domain K01M1_00170 PF08240 Alcohol dehydrogenase GroES-like domain K01M1_00170 PF00107 Zinc-binding dehydrogenase K01M1_00180 PF02803 Thiolase, C-terminal domain K01M1_00180 PF00108 Thiolase, N-terminal domain K01M1_00190 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K01M1_00190 PF00378 Enoyl-CoA hydratase/isomerase K01M1_00190 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain K01M1_00200 PF09186 Domain of unknown function (DUF1949) K01M1_00200 PF01205 Uncharacterized protein family UPF0029 K01M1_00210 PF02386 Cation transport protein K01M1_00220 PF12724 Flavodoxin domain K01M1_00290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K01M1_00290 PF03466 LysR substrate binding domain K01M1_00300 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain K01M1_00300 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain K01M1_00310 PF04380 Membrane fusogenic activity K01M1_00320 PF00873 AcrB/AcrD/AcrF family K01M1_00330 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion K01M1_00340 PF16295 Tetracyclin repressor-like, C-terminal domain K01M1_00340 PF00440 Bacterial regulatory proteins, tetR family K01M1_00350 PF00580 UvrD/REP helicase N-terminal domain K01M1_00350 PF13361 UvrD-like helicase C-terminal domain K01M1_00360 PF13442 Cytochrome C oxidase, cbb3-type, subunit III K01M1_00420 PF13419 Haloacid dehalogenase-like hydrolase K01M1_00430 PF00005 ABC transporter K01M1_00430 PF08352 Oligopeptide/dipeptide transporter, C-terminal region K01M1_00440 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle K01M1_00460 PF00528 Binding-protein-dependent transport system inner membrane component K01M1_00460 PF12911 N-terminal TM domain of oligopeptide transport permease C K01M1_00480 PF00356 Bacterial regulatory proteins, lacI family K01M1_00480 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family K01M1_00490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K01M1_00490 PF03466 LysR substrate binding domain K01M1_00500 PF00893 Small Multidrug Resistance protein K01M1_00510 PF00893 Small Multidrug Resistance protein K01M1_00520 PF00920 Dehydratase family K01M1_00530 PF01202 Shikimate kinase K01M1_00540 PF02447 GntP family permease K01M1_00550 PF01081 KDPG and KHG aldolase K01M1_00560 PF01048 Phosphorylase superfamily K01M1_00570 PF03466 LysR substrate binding domain K01M1_00570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K01M1_00580 PF07992 Pyridine nucleotide-disulphide oxidoreductase K01M1_00580 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K01M1_00590 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ K01M1_00600 PF01432 Peptidase family M3 K01M1_00610 PF01037 Lrp/AsnC ligand binding domain K01M1_00620 PF08448 PAS fold K01M1_00620 PF00990 Diguanylate cyclase, GGDEF domain K01M1_00620 PF00563 EAL domain K01M1_00630 PF04445 Putative SAM-dependent methyltransferase K01M1_00650 PF00892 EamA-like transporter family K01M1_00660 PF00582 Universal stress protein family K01M1_00670 PF00210 Ferritin-like domain K01M1_00680 PF10625 Universal stress protein B (UspB) K01M1_00700 PF01590 GAF domain K01M1_00700 PF00158 Sigma-54 interaction domain K01M1_00700 PF02954 Bacterial regulatory protein, Fis family K01M1_00750 PF00781 Diacylglycerol kinase catalytic domain K01M1_00810 PF01594 AI-2E family transporter K01M1_00820 PF03707 Bacterial signalling protein N terminal repeat K01M1_00820 PF00990 Diguanylate cyclase, GGDEF domain K01M1_00820 PF00563 EAL domain K01M1_00840 PF02646 RmuC family K01M1_00850 PF01209 ubiE/COQ5 methyltransferase family K01M1_00860 PF02036 SCP-2 sterol transfer family K01M1_00870 PF03109 ABC1 family K01M1_00880 PF02416 mttA/Hcf106 family K01M1_00890 PF02416 mttA/Hcf106 family K01M1_00900 PF00902 Sec-independent protein translocase protein (TatC) K01M1_00910 PF01026 TatD related DNase K01M1_00920 PF00490 Delta-aminolevulinic acid dehydratase K01M1_00930 PF00583 Acetyltransferase (GNAT) family K01M1_00950 PF00476 DNA polymerase family A K01M1_00950 PF01367 5'-3' exonuclease, C-terminal SAM fold K01M1_00950 PF01612 3'-5' exonuclease K01M1_00950 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain K01M1_00960 PF01926 50S ribosome-binding GTPase K01M1_00970 PF00034 Cytochrome c K01M1_00990 PF04220 Der GTPase activator (YihI) K01M1_01000 PF10675 Protein of unknown function (DUF2489) K01M1_01010 PF06969 HemN C-terminal domain K01M1_01010 PF04055 Radical SAM superfamily K01M1_01020 PF00962 Adenosine/AMP deaminase K01M1_01030 PF00990 Diguanylate cyclase, GGDEF domain K01M1_01030 PF00563 EAL domain K01M1_01030 PF03707 Bacterial signalling protein N terminal repeat K01M1_01040 PF00158 Sigma-54 interaction domain K01M1_01040 PF02954 Bacterial regulatory protein, Fis family K01M1_01040 PF00072 Response regulator receiver domain K01M1_01050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K01M1_01050 PF00512 His Kinase A (phospho-acceptor) domain K01M1_01050 PF00989 PAS fold K01M1_01070 PF03951 Glutamine synthetase, beta-Grasp domain K01M1_01070 PF00120 Glutamine synthetase, catalytic domain K01M1_01090 PF00308 Bacterial dnaA protein K01M1_01090 PF08299 Bacterial dnaA protein helix-turn-helix K01M1_01110 PF03631 Virulence factor BrkB K01M1_01120 PF02580 D-Tyr-tRNA(Tyr) deacylase K01M1_01130 PF00583 Acetyltransferase (GNAT) family K01M1_01130 PF09500 Putative thioesterase (yiiD_Cterm) K01M1_01150 PF01293 Phosphoenolpyruvate carboxykinase K01M1_01160 PF01430 Hsp33 protein K01M1_01170 PF01479 S4 domain K01M1_01180 PF11356 Type II secretion system protein C K01M1_01190 PF00263 Bacterial type II and III secretion system protein K01M1_01190 PF03958 Bacterial type II/III secretion system short domain K01M1_01200 PF00437 Type II/IV secretion system protein K01M1_01210 PF00482 Type II secretion system (T2SS), protein F K01M1_01220 PF07963 Prokaryotic N-terminal methylation motif K01M1_01220 PF08334 Type II secretion system (T2SS), protein G K01M1_01230 PF12019 Type II transport protein GspH K01M1_01240 PF02501 Type II secretion system (T2SS), protein I K01M1_01240 PF07963 Prokaryotic N-terminal methylation motif K01M1_01250 PF07963 Prokaryotic N-terminal methylation motif K01M1_01250 PF11612 Type II secretion system (T2SS), protein J K01M1_01260 PF03934 Type II secretion system (T2SS), protein K K01M1_01270 PF12693 GspL periplasmic domain K01M1_01270 PF05134 Type II secretion system (T2SS), protein L K01M1_01280 PF04612 Type II secretion system (T2SS), protein M K01M1_01290 PF01203 Type II secretion system (T2SS), protein N K01M1_01300 PF00459 Inositol monophosphatase family K01M1_01310 PF00293 NUDIX domain K01M1_01320 PF01521 Iron-sulphur cluster biosynthesis K01M1_01320 PF01106 NifU-like domain K01M1_01330 PF00156 Phosphoribosyl transferase domain K01M1_01340 PF00561 alpha/beta hydrolase fold K01M1_01360 PF17674 HHH domain K01M1_01360 PF16921 Tex protein YqgF-like domain K01M1_01360 PF09371 Tex-like protein N-terminal domain K01M1_01360 PF00575 S1 RNA binding domain K01M1_01380 PF03449 Transcription elongation factor, N-terminal K01M1_01380 PF01272 Transcription elongation factor, GreA/GreB, C-term K01M1_01400 PF00486 Transcriptional regulatory protein, C terminal K01M1_01400 PF00072 Response regulator receiver domain K01M1_01410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K01M1_01410 PF00512 His Kinase A (phospho-acceptor) domain K01M1_01410 PF00672 HAMP domain K01M1_01420 PF00860 Permease family K01M1_01430 PF00271 Helicase conserved C-terminal domain K01M1_01430 PF17191 RecG wedge domain K01M1_01430 PF00270 DEAD/DEAH box helicase K01M1_01440 PF00588 SpoU rRNA Methylase family K01M1_01440 PF12105 SpoU, rRNA methylase, C-terminal K01M1_01450 PF04607 Region found in RelA / SpoT proteins K01M1_01450 PF13291 ACT domain K01M1_01450 PF02824 TGS domain K01M1_01460 PF01192 RNA polymerase Rpb6 K01M1_01470 PF00625 Guanylate kinase K01M1_01500 PF02472 Biopolymer transport protein ExbD/TolR K01M1_01510 PF01618 MotA/TolQ/ExbB proton channel family K01M1_01540 PF00593 TonB dependent receptor K01M1_01540 PF07715 TonB-dependent Receptor Plug Domain K01M1_01550 PF00528 Binding-protein-dependent transport system inner membrane component K01M1_01560 PF00528 Binding-protein-dependent transport system inner membrane component K01M1_01560 PF12911 N-terminal TM domain of oligopeptide transport permease C K01M1_01570 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle K01M1_01580 PF08352 Oligopeptide/dipeptide transporter, C-terminal region K01M1_01580 PF00005 ABC transporter K01M1_01590 PF08352 Oligopeptide/dipeptide transporter, C-terminal region K01M1_01590 PF00005 ABC transporter K01M1_01610 PF08340 Domain of unknown function (DUF1732) K01M1_01610 PF03755 YicC-like family, N-terminal region K01M1_01620 PF01138 3' exoribonuclease family, domain 1 K01M1_01620 PF03725 3' exoribonuclease family, domain 2 K01M1_01630 PF00156 Phosphoribosyl transferase domain K01M1_01640 PF03279 Bacterial lipid A biosynthesis acyltransferase K01M1_01650 PF00440 Bacterial regulatory proteins, tetR family K01M1_01660 PF02441 Flavoprotein K01M1_01660 PF04127 DNA / pantothenate metabolism flavoprotein K01M1_01670 PF17200 Single Cache domain 2 K01M1_01670 PF00672 HAMP domain K01M1_01670 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K01M1_01680 PF04002 RadC-like JAB domain K01M1_01690 PF00830 Ribosomal L28 family K01M1_01700 PF00471 Ribosomal protein L33 K01M1_01720 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain K01M1_01720 PF06827 Zinc finger found in FPG and IleRS K01M1_01720 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain K01M1_01730 PF01467 Cytidylyltransferase-like K01M1_01740 PF05686 Glycosyl transferase family 90 K01M1_01750 PF00535 Glycosyl transferase family 2 K01M1_01760 PF00535 Glycosyl transferase family 2 K01M1_01770 PF01075 Glycosyltransferase family 9 (heptosyltransferase) K01M1_01780 PF01219 Prokaryotic diacylglycerol kinase K01M1_01800 PF16363 GDP-mannose 4,6 dehydratase K01M1_01810 PF00483 Nucleotidyl transferase K01M1_01820 PF05523 WxcM-like, C-terminal K01M1_01840 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family K01M1_01890 PF00682 HMGL-like K01M1_01890 PF07836 DmpG-like communication domain K01M1_01900 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) K01M1_01910 PF01075 Glycosyltransferase family 9 (heptosyltransferase) K01M1_01930 PF03279 Bacterial lipid A biosynthesis acyltransferase K01M1_01960 PF01370 NAD dependent epimerase/dehydratase family K01M1_01970 PF06082 Exopolysaccharide biosynthesis protein YbjH K01M1_02020 PF10531 SLBB domain K01M1_02020 PF02563 Polysaccharide biosynthesis/export protein K01M1_02020 PF18412 Outer-membrane lipoprotein Wza C-terminal domain K01M1_02070 PF00534 Glycosyl transferases group 1 K01M1_02070 PF13439 Glycosyltransferase Family 4 K01M1_02090 PF00534 Glycosyl transferases group 1 K01M1_02090 PF13439 Glycosyltransferase Family 4 K01M1_02100 PF13439 Glycosyltransferase Family 4 K01M1_02100 PF00534 Glycosyl transferases group 1 K01M1_02110 PF02397 Bacterial sugar transferase K01M1_02120 PF10996 Beta-Casp domain K01M1_02120 PF00753 Metallo-beta-lactamase superfamily K01M1_02120 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain K01M1_02130 PF00953 Glycosyl transferase family 4 K01M1_02180 PF00535 Glycosyl transferase family 2 K01M1_02190 PF00535 Glycosyl transferase family 2 K01M1_02210 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain K01M1_02210 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain K01M1_02210 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain K01M1_02220 PF01370 NAD dependent epimerase/dehydratase family K01M1_02230 PF00483 Nucleotidyl transferase K01M1_02240 PF00121 Triosephosphate isomerase K01M1_02280 PF00455 DeoR C terminal sensor domain K01M1_02280 PF08220 DeoR-like helix-turn-helix domain K01M1_02290 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded K01M1_02300 PF06005 Cell division protein ZapB K01M1_02310 PF03737 Aldolase/RraA K01M1_02320 PF01040 UbiA prenyltransferase family K01M1_02380 PF04002 RadC-like JAB domain K01M1_02410 PF00072 Response regulator receiver domain K01M1_02410 PF12431 Transcriptional regulator K01M1_02420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K01M1_02420 PF17203 Single cache domain 3 K01M1_02430 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit K01M1_02440 PF00682 HMGL-like K01M1_02440 PF00364 Biotin-requiring enzyme K01M1_02440 PF02436 Conserved carboxylase domain K01M1_02450 PF04277 Oxaloacetate decarboxylase, gamma chain K01M1_02460 PF03390 2-hydroxycarboxylate transporter family K01M1_02470 PF08218 Citrate lyase ligase C-terminal domain K01M1_02480 PF06857 Malonate decarboxylase delta subunit (MdcD) K01M1_02490 PF03328 HpcH/HpaI aldolase/citrate lyase family K01M1_02500 PF04223 Citrate lyase, alpha subunit (CitF) K01M1_02510 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase K01M1_02520 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase K01M1_02550 PF07724 AAA domain (Cdc48 subfamily) K01M1_02550 PF00004 ATPase family associated with various cellular activities (AAA) K01M1_02560 PF00227 Proteasome subunit K01M1_02590 PF00356 Bacterial regulatory proteins, lacI family K01M1_02600 PF00271 Helicase conserved C-terminal domain K01M1_02600 PF17764 3′ DNA-binding domain (3′BD) K01M1_02600 PF00270 DEAD/DEAH box helicase K01M1_02600 PF18319 PriA DNA helicase Cys-rich region (CRR) domain K01M1_02600 PF18074 Primosomal protein N C-terminal domain K01M1_02610 PF01197 Ribosomal protein L31 K01M1_02620 PF00338 Ribosomal protein S10p/S20e K01M1_02630 PF00297 Ribosomal protein L3 K01M1_02640 PF00573 Ribosomal protein L4/L1 family K01M1_02650 PF00276 Ribosomal protein L23 K01M1_02660 PF00181 Ribosomal Proteins L2, RNA binding domain K01M1_02660 PF03947 Ribosomal Proteins L2, C-terminal domain K01M1_02670 PF00203 Ribosomal protein S19 K01M1_02680 PF00237 Ribosomal protein L22p/L17e K01M1_02690 PF07650 KH domain K01M1_02690 PF00189 Ribosomal protein S3, C-terminal domain K01M1_02700 PF00252 Ribosomal protein L16p/L10e K01M1_02710 PF00831 Ribosomal L29 protein K01M1_02720 PF00366 Ribosomal protein S17 K01M1_02730 PF00238 Ribosomal protein L14p/L23e K01M1_02740 PF00467 KOW motif K01M1_02740 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 K01M1_02750 PF00673 ribosomal L5P family C-terminus K01M1_02750 PF00281 Ribosomal protein L5 K01M1_02760 PF00253 Ribosomal protein S14p/S29e K01M1_02770 PF00410 Ribosomal protein S8 K01M1_02780 PF00347 Ribosomal protein L6 K01M1_02790 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast K01M1_02800 PF03719 Ribosomal protein S5, C-terminal domain K01M1_02800 PF00333 Ribosomal protein S5, N-terminal domain K01M1_02810 PF00327 Ribosomal protein L30p/L7e K01M1_02830 PF00344 SecY translocase K01M1_02840 PF00444 Ribosomal protein L36 K01M1_02850 PF00416 Ribosomal protein S13/S18 K01M1_02860 PF00411 Ribosomal protein S11 K01M1_02870 PF01479 S4 domain K01M1_02870 PF00163 Ribosomal protein S4/S9 N-terminal domain K01M1_02880 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain K01M1_02880 PF01000 RNA polymerase Rpb3/RpoA insert domain K01M1_02880 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain K01M1_02890 PF01196 Ribosomal protein L17 K01M1_02910 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase K01M1_02910 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase K01M1_02930 PF13673 Acetyltransferase (GNAT) domain K01M1_02940 PF03880 DbpA RNA binding domain K01M1_02940 PF00270 DEAD/DEAH box helicase K01M1_02940 PF00271 Helicase conserved C-terminal domain K01M1_02960 PF00149 Calcineurin-like phosphoesterase K01M1_02960 PF02872 5'-nucleotidase, C-terminal domain K01M1_02970 PF10414 Sirohaem synthase dimerisation region K01M1_02970 PF14824 Sirohaem biosynthesis protein central K01M1_02970 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases K01M1_02980 PF01507 Phosphoadenosine phosphosulfate reductase family K01M1_02990 PF00009 Elongation factor Tu GTP binding domain K01M1_03000 PF03600 Citrate transporter K01M1_03000 PF02080 TrkA-C domain K01M1_03060 PF00005 ABC transporter K01M1_03080 PF10795 Protein of unknown function (DUF2607) K01M1_03090 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) K01M1_03100 PF06526 Protein of unknown function (DUF1107) K01M1_03110 PF01625 Peptide methionine sulfoxide reductase K01M1_03120 PF17243 POTRA domain TamA domain 1 K01M1_03120 PF01103 Surface antigen K01M1_03130 PF04357 TamB, inner membrane protein subunit of TAM complex K01M1_03140 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like K01M1_03160 PF00719 Inorganic pyrophosphatase K01M1_03170 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain K01M1_03180 PF08245 Mur ligase middle domain K01M1_03180 PF01225 Mur ligase family, catalytic domain K01M1_03180 PF02875 Mur ligase family, glutamate ligase domain K01M1_03190 PF02441 Flavoprotein K01M1_03210 PF00528 Binding-protein-dependent transport system inner membrane component K01M1_03220 PF00005 ABC transporter K01M1_03230 PF03466 LysR substrate binding domain K01M1_03230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K01M1_03240 PF00724 NADH:flavin oxidoreductase / NADH oxidase family K01M1_03270 PF16868 NMT1-like family K01M1_03280 PF01316 Arginine repressor, DNA binding domain K01M1_03280 PF02863 Arginine repressor, C-terminal domain K01M1_03290 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain K01M1_03290 PF00056 lactate/malate dehydrogenase, NAD binding domain K01M1_03310 PF00348 Polyprenyl synthetase K01M1_03320 PF00829 Ribosomal prokaryotic L21 protein K01M1_03330 PF01016 Ribosomal L27 protein K01M1_03340 PF01926 50S ribosome-binding GTPase K01M1_03340 PF01018 GTP1/OBG K01M1_03350 PF06738 Putative threonine/serine exporter K01M1_03360 PF12821 Threonine/Serine exporter, ThrE K01M1_03370 PF00186 Dihydrofolate reductase K01M1_03380 PF00149 Calcineurin-like phosphoesterase K01M1_03390 PF04379 ApaG domain K01M1_03400 PF00398 Ribosomal RNA adenine dimethylase K01M1_03410 PF04166 Pyridoxal phosphate biosynthetic protein PdxA K01M1_03420 PF09312 SurA N-terminal domain K01M1_03430 PF04453 LPS transport system D K01M1_03430 PF03968 OstA-like protein K01M1_03440 PF05099 Tellurite resistance protein TerB K01M1_03440 PF00226 DnaJ domain K01M1_03460 PF00694 Aconitase C-terminal domain K01M1_03470 PF00330 Aconitase family (aconitate hydratase) K01M1_03480 PF00180 Isocitrate/isopropylmalate dehydrogenase K01M1_03490 PF08502 LeuA allosteric (dimerisation) domain K01M1_03490 PF00682 HMGL-like K01M1_03510 PF01569 PAP2 superfamily K01M1_03530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K01M1_03530 PF03466 LysR substrate binding domain K01M1_03540 PF00501 AMP-binding enzyme K01M1_03550 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K01M1_03550 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain K01M1_03550 PF00205 Thiamine pyrophosphate enzyme, central domain K01M1_03560 PF10369 Small subunit of acetolactate synthase K01M1_03570 PF07694 5TMR of 5TMR-LYT K01M1_03570 PF00990 Diguanylate cyclase, GGDEF domain K01M1_03590 PF00224 Pyruvate kinase, barrel domain K01M1_03590 PF02887 Pyruvate kinase, alpha/beta domain K01M1_03600 PF00455 DeoR C terminal sensor domain K01M1_03600 PF08220 DeoR-like helix-turn-helix domain K01M1_03610 PF01380 SIS domain K01M1_03620 PF00465 Iron-containing alcohol dehydrogenase K01M1_03630 PF02733 Dak1 domain K01M1_03640 PF02734 DAK2 domain K01M1_03650 PF05524 PEP-utilising enzyme, N-terminal K01M1_03650 PF00391 PEP-utilising enzyme, mobile domain K01M1_03650 PF02896 PEP-utilising enzyme, TIM barrel domain K01M1_03660 PF02954 Bacterial regulatory protein, Fis family K01M1_03660 PF00158 Sigma-54 interaction domain K01M1_03660 PF00989 PAS fold K01M1_03670 PF05068 Mannitol repressor K01M1_03680 PF01232 Mannitol dehydrogenase Rossmann domain K01M1_03680 PF08125 Mannitol dehydrogenase C-terminal domain K01M1_03690 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit K01M1_03690 PF02378 Phosphotransferase system, EIIC K01M1_03690 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K01M1_03730 PF03180 NLPA lipoprotein K01M1_03750 PF04542 Sigma-70 region 2 K01M1_03750 PF00140 Sigma-70 factor, region 1.2 K01M1_03750 PF03979 Sigma-70 factor, region 1.1 K01M1_03750 PF04539 Sigma-70 region 3 K01M1_03750 PF04546 Sigma-70, non-essential region K01M1_03750 PF04545 Sigma-70, region 4 K01M1_03760 PF08278 DNA primase DnaG DnaB-binding K01M1_03760 PF01807 CHC2 zinc finger K01M1_03760 PF08275 DNA primase catalytic core, N-terminal domain K01M1_03760 PF10410 DnaB-helicase binding domain of primase K01M1_03770 PF09424 Yqey-like protein K01M1_03780 PF01165 Ribosomal protein S21 K01M1_03790 PF00814 Glycoprotease family K01M1_03800 PF00561 alpha/beta hydrolase fold K01M1_03810 PF02660 Glycerol-3-phosphate acyltransferase K01M1_03820 PF02152 Dihydroneopterin aldolase K01M1_03830 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) K01M1_03840 PF02673 Bacitracin resistance protein BacA K01M1_03850 PF01743 Poly A polymerase head domain K01M1_03850 PF12627 Probable RNA and SrmB- binding site of polymerase A K01M1_03850 PF01966 HD domain K01M1_03860 PF01471 Putative peptidoglycan binding domain K01M1_03860 PF13401 AAA domain K01M1_03890 PF08239 Bacterial SH3 domain K01M1_03900 PF01384 Phosphate transporter family K01M1_03910 PF01865 Protein of unknown function DUF47 K01M1_03920 PF01928 CYTH domain K01M1_03940 PF00672 HAMP domain K01M1_03940 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K01M1_03940 PF02743 Cache domain K01M1_03950 PF08335 GlnD PII-uridylyltransferase K01M1_03950 PF03710 Glutamate-ammonia ligase adenylyltransferase K01M1_03960 PF01467 Cytidylyltransferase-like K01M1_03960 PF00294 pfkB family carbohydrate kinase K01M1_03970 PF02321 Outer membrane efflux protein K01M1_03980 PF00293 NUDIX domain K01M1_03990 PF06853 Protein of unknown function (DUF1249) K01M1_04000 PF00149 Calcineurin-like phosphoesterase K01M1_04010 PF05728 Uncharacterised protein family (UPF0227) K01M1_04020 PF00986 DNA gyrase B subunit, carboxyl terminus K01M1_04020 PF00204 DNA gyrase B K01M1_04020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K01M1_04020 PF01751 Toprim domain K01M1_04030 PF03989 DNA gyrase C-terminal domain, beta-propeller K01M1_04030 PF00521 DNA gyrase/topoisomerase IV, subunit A K01M1_04040 PF13180 PDZ domain K01M1_04050 PF00595 PDZ domain K01M1_04060 PF06295 Protein of unknown function (DUF1043) K01M1_04070 PF03969 AFG1-like ATPase K01M1_04080 PF00572 Ribosomal protein L13 K01M1_04090 PF00380 Ribosomal protein S9/S16 K01M1_04100 PF00355 Rieske [2Fe-2S] domain K01M1_04100 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal K01M1_04110 PF00033 Cytochrome b/b6/petB K01M1_04110 PF00032 Cytochrome b(C-terminal)/b6/petD K01M1_04120 PF02167 Cytochrome C1 family K01M1_04130 PF02798 Glutathione S-transferase, N-terminal domain K01M1_04130 PF00043 Glutathione S-transferase, C-terminal domain K01M1_04140 PF04386 Stringent starvation protein B K01M1_04170 PF04972 BON domain K01M1_04180 PF13580 SIS domain K01M1_04190 PF02021 Uncharacterised protein family UPF0102 K01M1_04200 PF04348 LppC putative lipoprotein K01M1_04210 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases K01M1_04220 PF01795 MraW methylase family K01M1_04230 PF04999 Cell division protein FtsL K01M1_04240 PF03717 Penicillin-binding Protein dimerisation domain K01M1_04240 PF00905 Penicillin binding protein transpeptidase domain K01M1_04250 PF08245 Mur ligase middle domain K01M1_04250 PF02875 Mur ligase family, glutamate ligase domain K01M1_04250 PF01225 Mur ligase family, catalytic domain K01M1_04260 PF08245 Mur ligase middle domain K01M1_04260 PF01225 Mur ligase family, catalytic domain K01M1_04260 PF02875 Mur ligase family, glutamate ligase domain K01M1_04270 PF00953 Glycosyl transferase family 4 K01M1_04270 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 K01M1_04280 PF02875 Mur ligase family, glutamate ligase domain K01M1_04280 PF08245 Mur ligase middle domain K01M1_04290 PF01098 Cell cycle protein K01M1_04300 PF03033 Glycosyltransferase family 28 N-terminal domain K01M1_04300 PF04101 Glycosyltransferase family 28 C-terminal domain K01M1_04310 PF02875 Mur ligase family, glutamate ligase domain K01M1_04310 PF08245 Mur ligase middle domain K01M1_04310 PF01225 Mur ligase family, catalytic domain K01M1_04320 PF08478 POTRA domain, FtsQ-type K01M1_04320 PF03799 Cell division protein FtsQ K01M1_04330 PF02491 SHS2 domain inserted in FTSA K01M1_04340 PF12327 FtsZ family, C-terminal domain K01M1_04340 PF00091 Tubulin/FtsZ family, GTPase domain K01M1_04350 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase K01M1_04370 PF02810 SEC-C motif K01M1_04370 PF07516 SecA Wing and Scaffold domain K01M1_04370 PF07517 SecA DEAD-like domain K01M1_04370 PF01043 SecA preprotein cross-linking domain K01M1_04380 PF00293 NUDIX domain K01M1_04390 PF05173 Dihydrodipicolinate reductase, C-terminus K01M1_04390 PF01113 Dihydrodipicolinate reductase, N-terminus K01M1_04400 PF00117 Glutamine amidotransferase class-I K01M1_04400 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain K01M1_04410 PF02142 MGS-like domain K01M1_04410 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain K01M1_04410 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain K01M1_04440 PF01925 Sulfite exporter TauE/SafE K01M1_04450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K01M1_04450 PF03466 LysR substrate binding domain K01M1_04460 PF03458 UPF0126 domain K01M1_04470 PF01497 Periplasmic binding protein K01M1_04480 PF17113 Regulatory signalling modulator protein AmpE K01M1_04480 PF03186 CobD/Cbib protein K01M1_04490 PF01048 Phosphorylase superfamily K01M1_04510 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster K01M1_04510 PF07992 Pyridine nucleotide-disulphide oxidoreductase K01M1_04520 PF00310 Glutamine amidotransferases class-II K01M1_04520 PF04898 Glutamate synthase central domain K01M1_04520 PF01645 Conserved region in glutamate synthase K01M1_04520 PF01493 GXGXG motif K01M1_04530 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster K01M1_04530 PF07992 Pyridine nucleotide-disulphide oxidoreductase K01M1_04540 PF01645 Conserved region in glutamate synthase K01M1_04540 PF04898 Glutamate synthase central domain K01M1_04540 PF00310 Glutamine amidotransferases class-II K01M1_04540 PF01493 GXGXG motif K01M1_04550 PF04055 Radical SAM superfamily K01M1_04550 PF16199 Radical_SAM C-terminal domain K01M1_04560 PF00563 EAL domain K01M1_04560 PF01590 GAF domain K01M1_04560 PF00360 Phytochrome region K01M1_04560 PF00990 Diguanylate cyclase, GGDEF domain K01M1_04570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K01M1_04570 PF00512 His Kinase A (phospho-acceptor) domain K01M1_04570 PF00989 PAS fold K01M1_04570 PF18415 Histidine kinase receptor ArcB trans-membrane domain K01M1_04570 PF00072 Response regulator receiver domain K01M1_04570 PF01627 Hpt domain K01M1_04590 PF00072 Response regulator receiver domain K01M1_04590 PF00486 Transcriptional regulatory protein, C terminal K01M1_04610 PF03737 Aldolase/RraA K01M1_04630 PF03447 Homoserine dehydrogenase, NAD binding domain K01M1_04630 PF00742 Homoserine dehydrogenase K01M1_04630 PF13840 ACT domain K01M1_04630 PF01842 ACT domain K01M1_04630 PF00696 Amino acid kinase family K01M1_04640 PF00288 GHMP kinases N terminal domain K01M1_04640 PF08544 GHMP kinases C terminal K01M1_04650 PF14821 Threonine synthase N terminus K01M1_04650 PF00291 Pyridoxal-phosphate dependent enzyme K01M1_04670 PF01228 Glycine radical K01M1_04680 PF01261 Xylose isomerase-like TIM barrel K01M1_04690 PF03167 Uracil DNA glycosylase superfamily K01M1_04720 PF01235 Sodium:alanine symporter family K01M1_04730 PF03883 Peroxide stress protein YaaA K01M1_04740 PF00270 DEAD/DEAH box helicase K01M1_04740 PF00271 Helicase conserved C-terminal domain K01M1_04750 PF05175 Methyltransferase small domain K01M1_04760 PF05525 Branched-chain amino acid transport protein K01M1_04770 PF00258 Flavodoxin K01M1_04780 PF00589 Phage integrase family K01M1_04780 PF02899 Phage integrase, N-terminal SAM-like domain K01M1_04790 PF10411 Disulfide bond isomerase protein N-terminus K01M1_04790 PF13098 Thioredoxin-like domain K01M1_04800 PF17768 RecJ OB domain K01M1_04800 PF02272 DHHA1 domain K01M1_04800 PF01368 DHH family K01M1_04810 PF03462 PCRF domain K01M1_04810 PF00472 RF-1 domain K01M1_04820 PF01336 OB-fold nucleic acid binding domain K01M1_04820 PF00152 tRNA synthetases class II (D, K and N) K01M1_04830 PF00158 Sigma-54 interaction domain K01M1_04830 PF00072 Response regulator receiver domain K01M1_04830 PF02954 Bacterial regulatory protein, Fis family K01M1_04860 PF00248 Aldo/keto reductase family K01M1_04880 PF02976 DNA mismatch repair enzyme MutH K01M1_04890 PF00293 NUDIX domain K01M1_04900 PF01590 GAF domain K01M1_04900 PF00391 PEP-utilising enzyme, mobile domain K01M1_04900 PF02896 PEP-utilising enzyme, TIM barrel domain K01M1_04900 PF05524 PEP-utilising enzyme, N-terminal K01M1_04910 PF01925 Sulfite exporter TauE/SafE K01M1_04930 PF00303 Thymidylate synthase K01M1_04950 PF02690 Na+/Pi-cotransporter K01M1_04960 PF03466 LysR substrate binding domain K01M1_04960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K01M1_04970 PF01022 Bacterial regulatory protein, arsR family K01M1_04980 PF01649 Ribosomal protein S20 K01M1_04990 PF03023 Lipid II flippase MurJ K01M1_05000 PF01687 Riboflavin kinase K01M1_05000 PF06574 FAD synthetase K01M1_05010 PF06827 Zinc finger found in FPG and IleRS K01M1_05010 PF00133 tRNA synthetases class I (I, L, M and V) K01M1_05010 PF08264 Anticodon-binding domain of tRNA K01M1_05020 PF01252 Signal peptidase (SPase) II K01M1_05030 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase K01M1_05040 PF02401 LytB protein K01M1_05060 PF04397 LytTr DNA-binding domain K01M1_05060 PF00072 Response regulator receiver domain K01M1_05070 PF06580 Histidine kinase K01M1_05070 PF07694 5TMR of 5TMR-LYT K01M1_05080 PF02554 Carbon starvation protein CstA K01M1_05110 PF01380 SIS domain K01M1_05120 PF03702 Anhydro-N-acetylmuramic acid kinase K01M1_05130 PF00933 Glycosyl hydrolase family 3 N terminal domain K01M1_05140 PF00793 DAHP synthetase I family K01M1_05150 PF02153 Prephenate dehydrogenase K01M1_05150 PF01817 Chorismate mutase type II K01M1_05160 PF04225 Opacity-associated protein A LysM-like domain K01M1_05160 PF01551 Peptidase family M23 K01M1_05170 PF07238 PilZ domain K01M1_05180 PF00005 ABC transporter K01M1_05180 PF12848 ABC transporter K01M1_05190 PF01464 Transglycosylase SLT domain K01M1_05190 PF14718 Soluble lytic murein transglycosylase L domain K01M1_05200 PF01371 Trp repressor protein K01M1_05210 PF01931 Protein of unknown function DUF84 K01M1_05220 PF01817 Chorismate mutase type II K01M1_05220 PF00800 Prephenate dehydratase K01M1_05230 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein K01M1_05240 PF00497 Bacterial extracellular solute-binding proteins, family 3 K01M1_05240 PF01464 Transglycosylase SLT domain K01M1_05250 PF13525 Outer membrane lipoprotein K01M1_05260 PF00849 RNA pseudouridylate synthase K01M1_05260 PF01479 S4 domain K01M1_05280 PF10431 C-terminal, D2-small domain, of ClpB protein K01M1_05280 PF02861 Clp amino terminal domain, pathogenicity island component K01M1_05280 PF17871 AAA lid domain K01M1_05280 PF07724 AAA domain (Cdc48 subfamily) K01M1_05280 PF00004 ATPase family associated with various cellular activities (AAA) K01M1_05380 PF03411 Penicillin-insensitive murein endopeptidase K01M1_05400 PF12838 4Fe-4S dicluster domain K01M1_05420 PF04381 Putative exonuclease, RdgC K01M1_05430 PF00486 Transcriptional regulatory protein, C terminal K01M1_05430 PF00072 Response regulator receiver domain K01M1_05440 PF11808 Phosphate regulon sensor protein PhoR K01M1_05440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K01M1_05440 PF00512 His Kinase A (phospho-acceptor) domain K01M1_05440 PF00989 PAS fold K01M1_05450 PF12849 PBP superfamily domain K01M1_05460 PF02541 Ppx/GppA phosphatase family K01M1_05470 PF13090 Polyphosphate kinase C-terminal domain 2 K01M1_05470 PF02503 Polyphosphate kinase middle domain K01M1_05470 PF17941 Polyphosphate kinase C-terminal domain 1 K01M1_05470 PF13089 Polyphosphate kinase N-terminal domain K01M1_05480 PF00528 Binding-protein-dependent transport system inner membrane component K01M1_05490 PF00528 Binding-protein-dependent transport system inner membrane component K01M1_05500 PF00005 ABC transporter K01M1_05510 PF01895 PhoU domain K01M1_05520 PF03976 Polyphosphate kinase 2 (PPK2) K01M1_05530 PF03932 CutC family K01M1_05540 PF00578 AhpC/TSA family K01M1_05540 PF10417 C-terminal domain of 1-Cys peroxiredoxin K01M1_05550 PF03466 LysR substrate binding domain K01M1_05550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K01M1_05560 PF01274 Malate synthase K01M1_05570 PF00463 Isocitrate lyase family K01M1_05580 PF00571 CBS domain K01M1_05600 PF02547 Queuosine biosynthesis protein K01M1_05610 PF01702 Queuine tRNA-ribosyltransferase K01M1_05620 PF02699 Preprotein translocase subunit K01M1_05630 PF02355 Protein export membrane protein K01M1_05630 PF07549 SecD/SecF GG Motif K01M1_05630 PF13721 SecD export protein N-terminal TM region K01M1_05640 PF02355 Protein export membrane protein K01M1_05640 PF07549 SecD/SecF GG Motif K01M1_05670 PF00459 Inositol monophosphatase family K01M1_05680 PF00588 SpoU rRNA Methylase family K01M1_05690 PF02082 Transcriptional regulator K01M1_05700 PF00266 Aminotransferase class-V K01M1_05710 PF01592 NifU-like N terminal domain K01M1_05720 PF01521 Iron-sulphur cluster biosynthesis K01M1_05730 PF00226 DnaJ domain K01M1_05730 PF07743 HSCB C-terminal oligomerisation domain K01M1_05740 PF00012 Hsp70 protein K01M1_05750 PF00111 2Fe-2S iron-sulfur cluster binding domain K01M1_05760 PF04384 Iron-sulphur cluster assembly K01M1_05770 PF00883 Cytosol aminopeptidase family, catalytic domain K01M1_05770 PF12404 Peptidase K01M1_05780 PF00334 Nucleoside diphosphate kinase K01M1_05790 PF04055 Radical SAM superfamily K01M1_05800 PF13464 Domain of unknown function (DUF4115) K01M1_05810 PF04551 GcpE protein K01M1_05820 PF13393 Histidyl-tRNA synthetase K01M1_05820 PF03129 Anticodon binding domain K01M1_05830 PF09976 Tetratricopeptide repeat-like domain K01M1_05840 PF13360 PQQ-like domain K01M1_05850 PF01926 50S ribosome-binding GTPase K01M1_05850 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal K01M1_05880 PF02601 Exonuclease VII, large subunit K01M1_05880 PF13742 OB-fold nucleic acid binding domain K01M1_05890 PF00478 IMP dehydrogenase / GMP reductase domain K01M1_05890 PF00571 CBS domain K01M1_05900 PF00958 GMP synthase C terminal domain K01M1_05900 PF02540 NAD synthase K01M1_05900 PF00117 Glutamine amidotransferase class-I K01M1_05910 PF00589 Phage integrase family K01M1_05910 PF13356 Arm DNA-binding domain K01M1_06050 PF03553 Na+/H+ antiporter family K01M1_06060 PF00704 Glycosyl hydrolases family 18 K01M1_06060 PF06483 Chitinase C K01M1_06070 PF01184 GPR1/FUN34/yaaH family K01M1_06080 PF01235 Sodium:alanine symporter family K01M1_06090 PF01266 FAD dependent oxidoreductase K01M1_06110 PF01053 Cys/Met metabolism PLP-dependent enzyme K01M1_06120 PF00202 Aminotransferase class-III K01M1_06160 PF00795 Carbon-nitrogen hydrolase K01M1_06160 PF00583 Acetyltransferase (GNAT) family K01M1_06170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K01M1_06170 PF03466 LysR substrate binding domain K01M1_06210 PF01668 SmpB protein K01M1_06220 PF03364 Polyketide cyclase / dehydrase and lipid transport K01M1_06230 PF03658 RnfH family Ubiquitin K01M1_06240 PF04355 SmpA / OmlA family K01M1_06260 PF02463 RecF/RecN/SMC N terminal domain K01M1_06280 PF01513 ATP-NAD kinase K01M1_06290 PF01025 GrpE K01M1_06310 PF00375 Sodium:dicarboxylate symporter family K01M1_06320 PF00012 Hsp70 protein K01M1_06330 PF01556 DnaJ C terminal domain K01M1_06330 PF00226 DnaJ domain K01M1_06330 PF00684 DnaJ central domain K01M1_06340 PF07963 Prokaryotic N-terminal methylation motif K01M1_06340 PF00114 Pilin (bacterial filament) K01M1_06390 PF03806 AbgT putative transporter family K01M1_06400 PF14437 MafB19-like deaminase K01M1_06410 PF00497 Bacterial extracellular solute-binding proteins, family 3 K01M1_06410 PF01464 Transglycosylase SLT domain K01M1_06420 PF02769 AIR synthase related protein, C-terminal domain K01M1_06420 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal K01M1_06420 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain K01M1_06450 PF07715 TonB-dependent Receptor Plug Domain K01M1_06450 PF00593 TonB dependent receptor K01M1_06480 PF07687 Peptidase dimerisation domain K01M1_06480 PF01546 Peptidase family M20/M25/M40 K01M1_06490 PF00860 Permease family K01M1_06500 PF00156 Phosphoribosyl transferase domain K01M1_06520 PF07417 Sigma factor-binding transcriptional regulator Crl K01M1_06530 PF01472 PUA domain K01M1_06530 PF00696 Amino acid kinase family K01M1_06540 PF00171 Aldehyde dehydrogenase family K01M1_06550 PF03477 ATP cone domain K01M1_06560 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region K01M1_06560 PF01872 RibD C-terminal domain K01M1_06570 PF00677 Lumazine binding domain K01M1_06580 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase K01M1_06580 PF00925 GTP cyclohydrolase II K01M1_06590 PF00885 6,7-dimethyl-8-ribityllumazine synthase K01M1_06600 PF01029 NusB family K01M1_06610 PF00586 AIR synthase related protein, N-terminal domain K01M1_06610 PF02769 AIR synthase related protein, C-terminal domain K01M1_06620 PF04608 Phosphatidylglycerophosphatase A K01M1_06630 PF13292 1-deoxy-D-xylulose-5-phosphate synthase K01M1_06630 PF02779 Transketolase, pyrimidine binding domain K01M1_06630 PF02780 Transketolase, C-terminal domain K01M1_06640 PF00348 Polyprenyl synthetase K01M1_06650 PF02609 Exonuclease VII small subunit K01M1_06660 PF01618 MotA/TolQ/ExbB proton channel family K01M1_06670 PF13677 Membrane MotB of proton-channel complex MotA/MotB K01M1_06670 PF00691 OmpA family K01M1_06680 PF02926 THUMP domain K01M1_06680 PF02568 Thiamine biosynthesis protein (ThiI) K01M1_06690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K01M1_06690 PF03466 LysR substrate binding domain K01M1_06710 PF04241 Protein of unknown function (DUF423) K01M1_06720 PF01728 FtsJ-like methyltransferase K01M1_06720 PF18125 RlmM ferredoxin-like domain K01M1_06730 PF01367 5'-3' exonuclease, C-terminal SAM fold K01M1_06730 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain K01M1_06740 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases K01M1_06740 PF11892 Domain of unknown function (DUF3412) K01M1_06740 PF03641 Possible lysine decarboxylase K01M1_06750 PF00072 Response regulator receiver domain K01M1_06750 PF00990 Diguanylate cyclase, GGDEF domain K01M1_06770 PF14489 QueF-like protein K01M1_06770 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term K01M1_06780 PF07348 Syd protein (SUKH-2) K01M1_06790 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) K01M1_06800 PF03180 NLPA lipoprotein K01M1_06810 PF00528 Binding-protein-dependent transport system inner membrane component K01M1_06820 PF00005 ABC transporter K01M1_06820 PF09383 NIL domain K01M1_06840 PF00356 Bacterial regulatory proteins, lacI family K01M1_06850 PF00367 phosphotransferase system, EIIB K01M1_06850 PF02378 Phosphotransferase system, EIIC K01M1_06860 PF00128 Alpha amylase, catalytic domain K01M1_06860 PF16657 Maltogenic Amylase, C-terminal domain K01M1_06890 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 K01M1_06890 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) K01M1_06900 PF00464 Serine hydroxymethyltransferase K01M1_06910 PF04055 Radical SAM superfamily K01M1_06910 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family K01M1_06920 PF03099 Biotin/lipoate A/B protein ligase family K01M1_06930 PF04359 Protein of unknown function (DUF493) K01M1_06940 PF00768 D-alanyl-D-alanine carboxypeptidase K01M1_06940 PF07943 Penicillin-binding protein 5, C-terminal domain K01M1_06950 PF05036 Sporulation related domain K01M1_06950 PF03330 Lytic transglycolase K01M1_06960 PF01098 Cell cycle protein K01M1_06970 PF00905 Penicillin binding protein transpeptidase domain K01M1_06970 PF03717 Penicillin-binding Protein dimerisation domain K01M1_06980 PF02590 Predicted SPOUT methyltransferase K01M1_07000 PF06144 DNA polymerase III, delta subunit K01M1_07000 PF14840 Processivity clamp loader gamma complex DNA pol III C-term K01M1_07010 PF04390 Lipopolysaccharide-assembly K01M1_07020 PF08264 Anticodon-binding domain of tRNA K01M1_07020 PF00133 tRNA synthetases class I (I, L, M and V) K01M1_07020 PF13603 Leucyl-tRNA synthetase, Domain 2 K01M1_07030 PF07295 Zinc-ribbon containing domain K01M1_07040 PF00795 Carbon-nitrogen hydrolase K01M1_07050 PF00571 CBS domain K01M1_07050 PF03471 Transporter associated domain K01M1_07060 PF02130 Uncharacterized protein family UPF0054 K01M1_07070 PF02562 PhoH-like protein K01M1_07080 PF01938 TRAM domain K01M1_07080 PF00919 Uncharacterized protein family UPF0004 K01M1_07080 PF04055 Radical SAM superfamily K01M1_07090 PF01494 FAD binding domain K01M1_07300 PF06071 Protein of unknown function (DUF933) K01M1_07300 PF01926 50S ribosome-binding GTPase K01M1_07310 PF01195 Peptidyl-tRNA hydrolase K01M1_07320 PF14572 Phosphoribosyl synthetase-associated domain K01M1_07320 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase K01M1_07330 PF00288 GHMP kinases N terminal domain K01M1_07330 PF08544 GHMP kinases C terminal K01M1_07340 PF03550 Outer membrane lipoprotein LolB K01M1_07350 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain K01M1_07350 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain K01M1_07350 PF01488 Shikimate / quinate 5-dehydrogenase K01M1_07360 PF00472 RF-1 domain K01M1_07360 PF03462 PCRF domain K01M1_07370 PF17827 PrmC N-terminal domain K01M1_07370 PF13847 Methyltransferase domain K01M1_07380 PF04247 Invasion gene expression up-regulator, SirB K01M1_07390 PF13369 Transglutaminase-like superfamily K01M1_07400 PF00793 DAHP synthetase I family K01M1_07410 PF00149 Calcineurin-like phosphoesterase K01M1_07410 PF02872 5'-nucleotidase, C-terminal domain K01M1_07420 PF04073 Aminoacyl-tRNA editing domain K01M1_07430 PF00849 RNA pseudouridylate synthase K01M1_07430 PF01479 S4 domain K01M1_07440 PF01713 Smr domain K01M1_07490 PF00728 Glycosyl hydrolase family 20, catalytic domain K01M1_07490 PF02838 Glycosyl hydrolase family 20, domain 2 K01M1_07490 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain K01M1_07490 PF03173 Putative carbohydrate binding domain K01M1_07520 PF00403 Heavy-metal-associated domain K01M1_07530 PF13609 Gram-negative porin K01M1_07540 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) K01M1_07550 PF00749 tRNA synthetases class I (E and Q), catalytic domain K01M1_07560 PF01389 OmpA-like transmembrane domain K01M1_07560 PF00691 OmpA family K01M1_07650 PF01584 CheW-like domain K01M1_07650 PF00072 Response regulator receiver domain K01M1_07660 PF03705 CheR methyltransferase, all-alpha domain K01M1_07660 PF01739 CheR methyltransferase, SAM binding domain K01M1_07670 PF00460 Flagella basal body rod protein K01M1_07680 PF00460 Flagella basal body rod protein K01M1_07680 PF06429 Flagellar basal body rod FlgEFG protein C-terminal K01M1_07690 PF13860 FlgD Ig-like domain K01M1_07690 PF13861 FlgD Tudor-like domain K01M1_07690 PF03963 Flagellar hook capping protein - N-terminal region K01M1_07700 PF07559 Flagellar basal body protein FlaE K01M1_07700 PF06429 Flagellar basal body rod FlgEFG protein C-terminal K01M1_07700 PF00460 Flagella basal body rod protein K01M1_07710 PF06429 Flagellar basal body rod FlgEFG protein C-terminal K01M1_07710 PF00460 Flagella basal body rod protein K01M1_07720 PF00460 Flagella basal body rod protein K01M1_07720 PF06429 Flagellar basal body rod FlgEFG protein C-terminal K01M1_07730 PF02107 Flagellar L-ring protein K01M1_07740 PF02119 Flagellar P-ring protein K01M1_07750 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase K01M1_07750 PF10135 Rod binding protein K01M1_07760 PF07196 Flagellin hook IN motif K01M1_07760 PF06429 Flagellar basal body rod FlgEFG protein C-terminal K01M1_07770 PF00669 Bacterial flagellin N-terminal helical region K01M1_07780 PF07196 Flagellin hook IN motif K01M1_07780 PF00669 Bacterial flagellin N-terminal helical region K01M1_07780 PF00700 Bacterial flagellin C-terminal helical region K01M1_07790 PF00700 Bacterial flagellin C-terminal helical region K01M1_07790 PF00669 Bacterial flagellin N-terminal helical region K01M1_07790 PF07196 Flagellin hook IN motif K01M1_07800 PF07196 Flagellin hook IN motif K01M1_07800 PF00700 Bacterial flagellin C-terminal helical region K01M1_07800 PF00669 Bacterial flagellin N-terminal helical region K01M1_07810 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 K01M1_07820 PF02896 PEP-utilising enzyme, TIM barrel domain K01M1_07820 PF00391 PEP-utilising enzyme, mobile domain K01M1_07820 PF05524 PEP-utilising enzyme, N-terminal K01M1_07840 PF00381 PTS HPr component phosphorylation site K01M1_07850 PF00291 Pyridoxal-phosphate dependent enzyme K01M1_07960 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase K01M1_07960 PF10135 Rod binding protein K01M1_07970 PF10135 Rod binding protein K01M1_07970 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase K01M1_08000 PF00669 Bacterial flagellin N-terminal helical region K01M1_08010 PF00669 Bacterial flagellin N-terminal helical region K01M1_08010 PF07196 Flagellin hook IN motif K01M1_08010 PF00700 Bacterial flagellin C-terminal helical region K01M1_08020 PF00700 Bacterial flagellin C-terminal helical region K01M1_08020 PF07196 Flagellin hook IN motif K01M1_08020 PF00669 Bacterial flagellin N-terminal helical region K01M1_08030 PF00669 Bacterial flagellin N-terminal helical region K01M1_08030 PF07196 Flagellin hook IN motif K01M1_08030 PF00700 Bacterial flagellin C-terminal helical region K01M1_08040 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 K01M1_08050 PF00391 PEP-utilising enzyme, mobile domain K01M1_08050 PF05524 PEP-utilising enzyme, N-terminal K01M1_08050 PF02896 PEP-utilising enzyme, TIM barrel domain K01M1_08070 PF00381 PTS HPr component phosphorylation site K01M1_08080 PF00291 Pyridoxal-phosphate dependent enzyme K01M1_08100 PF04354 ZipA, C-terminal FtsZ-binding domain K01M1_08110 PF03119 NAD-dependent DNA ligase C4 zinc finger domain K01M1_08110 PF12826 Helix-hairpin-helix motif K01M1_08110 PF00533 BRCA1 C Terminus (BRCT) domain K01M1_08110 PF01653 NAD-dependent DNA ligase adenylation domain K01M1_08110 PF03120 NAD-dependent DNA ligase OB-fold domain K01M1_08120 PF03573 outer membrane porin, OprD family K01M1_08160 PF16200 C-terminal region of band_7 K01M1_08160 PF01145 SPFH domain / Band 7 family K01M1_08170 PF11658 Cellulose biosynthesis protein BcsG K01M1_08190 PF10995 Cellulose biosynthesis GIL K01M1_08210 PF06564 Cellulose biosynthesis protein BcsQ K01M1_08220 PF03552 Cellulose synthase K01M1_08220 PF07238 PilZ domain K01M1_08220 PF00535 Glycosyl transferase family 2 K01M1_08230 PF03170 Bacterial cellulose synthase subunit K01M1_08240 PF01270 Glycosyl hydrolases family 8 K01M1_08250 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) K01M1_08260 PF00085 Thioredoxin K01M1_08270 PF00106 short chain dehydrogenase K01M1_08280 PF08338 Domain of unknown function (DUF1731) K01M1_08280 PF01370 NAD dependent epimerase/dehydratase family K01M1_08290 PF07556 Protein of unknown function (DUF1538) K01M1_08300 PF07556 Protein of unknown function (DUF1538) K01M1_08340 PF12850 Calcineurin-like phosphoesterase superfamily domain K01M1_08370 PF17323 Trans-membrane regulatory protein ToxS K01M1_08380 PF00486 Transcriptional regulatory protein, C terminal K01M1_08390 PF00183 Hsp90 protein K01M1_08390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K01M1_08400 PF05191 Adenylate kinase, active site lid K01M1_08410 PF00762 Ferrochelatase K01M1_08420 PF00854 POT family K01M1_08430 PF02357 Transcription termination factor nusG K01M1_08440 PF00733 Asparagine synthase K01M1_08440 PF13537 Glutamine amidotransferase domain K01M1_08450 PF00999 Sodium/hydrogen exchanger family K01M1_08450 PF02254 TrkA-N domain K01M1_08460 PF01047 MarR family K01M1_08460 PF00480 ROK family K01M1_08470 PF01979 Amidohydrolase family K01M1_08480 PF00367 phosphotransferase system, EIIB K01M1_08480 PF02378 Phosphotransferase system, EIIC K01M1_08480 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 K01M1_08490 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain K01M1_08490 PF00749 tRNA synthetases class I (E and Q), catalytic domain K01M1_08500 PF01475 Ferric uptake regulator family K01M1_08520 PF00258 Flavodoxin K01M1_08540 PF12697 Alpha/beta hydrolase family K01M1_08550 PF17206 SeqA protein N-terminal domain K01M1_08550 PF03925 SeqA protein C-terminal domain K01M1_08560 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I K01M1_08560 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III K01M1_08560 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II K01M1_08560 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain K01M1_08580 PF01784 NIF3 (NGG1p interacting factor 3) K01M1_08590 PF00285 Citrate synthase, C-terminal domain K01M1_08600 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit K01M1_08610 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit K01M1_08620 PF02910 Fumarate reductase flavoprotein C-term K01M1_08620 PF00890 FAD binding domain K01M1_08630 PF13085 2Fe-2S iron-sulfur cluster binding domain K01M1_08640 PF16078 2-oxoglutarate dehydrogenase N-terminus K01M1_08640 PF16870 2-oxoglutarate dehydrogenase C-terminal K01M1_08640 PF02779 Transketolase, pyrimidine binding domain K01M1_08640 PF00676 Dehydrogenase E1 component K01M1_08650 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) K01M1_08650 PF02817 e3 binding domain K01M1_08650 PF00364 Biotin-requiring enzyme K01M1_08660 PF08442 ATP-grasp domain K01M1_08660 PF00549 CoA-ligase K01M1_08670 PF00549 CoA-ligase K01M1_08670 PF02629 CoA binding domain K01M1_08680 PF00950 ABC 3 transport family K01M1_08690 PF00005 ABC transporter K01M1_08700 PF01297 Zinc-uptake complex component A periplasmic K01M1_08710 PF12833 Helix-turn-helix domain K01M1_08710 PF02311 AraC-like ligand binding domain K01M1_08720 PF04023 FeoA domain K01M1_08730 PF17910 FeoB cytosolic helical domain K01M1_08730 PF02421 Ferrous iron transport protein B K01M1_08730 PF07670 Nucleoside recognition K01M1_08730 PF07664 Ferrous iron transport protein B C terminus K01M1_08770 PF00750 tRNA synthetases class I (R) K01M1_08770 PF05746 DALR anticodon binding domain K01M1_08770 PF03485 Arginyl tRNA synthetase N terminal domain K01M1_08780 PF06185 YecM protein K01M1_08800 PF00089 Trypsin K01M1_08810 PF00551 Formyl transferase K01M1_08810 PF01842 ACT domain K01M1_08820 PF13307 Helicase C-terminal domain K01M1_08820 PF04851 Type III restriction enzyme, res subunit K01M1_08830 PF00814 Glycoprotease family K01M1_08850 PF03843 Outer membrane lipoprotein Slp family K01M1_08860 PF00561 alpha/beta hydrolase fold K01M1_08870 PF13193 AMP-binding enzyme C-terminal domain K01M1_08870 PF00501 AMP-binding enzyme K01M1_08880 PF01612 3'-5' exonuclease K01M1_08880 PF00570 HRDC domain K01M1_08890 PF03776 Septum formation topological specificity factor MinE K01M1_08900 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain K01M1_08910 PF05209 Septum formation inhibitor MinC, N-terminal domain K01M1_08910 PF03775 Septum formation inhibitor MinC, C-terminal domain K01M1_08920 PF05166 YcgL domain K01M1_08930 PF13406 Transglycosylase SLT domain K01M1_08940 PF03466 LysR substrate binding domain K01M1_08940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K01M1_08950 PF01773 Na+ dependent nucleoside transporter N-terminus K01M1_08950 PF07662 Na+ dependent nucleoside transporter C-terminus K01M1_08950 PF07670 Nucleoside recognition K01M1_08960 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain K01M1_08960 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain K01M1_08980 PF01209 ubiE/COQ5 methyltransferase family K01M1_08990 PF00109 Beta-ketoacyl synthase, N-terminal domain K01M1_08990 PF02801 Beta-ketoacyl synthase, C-terminal domain K01M1_09010 PF07977 FabA-like domain K01M1_09020 PF00109 Beta-ketoacyl synthase, N-terminal domain K01M1_09020 PF02801 Beta-ketoacyl synthase, C-terminal domain K01M1_09070 PF00221 Aromatic amino acid lyase K01M1_09080 PF00535 Glycosyl transferase family 2 K01M1_09090 PF07977 FabA-like domain K01M1_09120 PF00550 Phosphopantetheine attachment site K01M1_09130 PF00550 Phosphopantetheine attachment site K01M1_09180 PF04820 Tryptophan halogenase K01M1_09200 PF00271 Helicase conserved C-terminal domain K01M1_09200 PF00270 DEAD/DEAH box helicase K01M1_09210 PF02254 TrkA-N domain K01M1_09210 PF02080 TrkA-C domain K01M1_09220 PF02386 Cation transport protein K01M1_09260 PF02696 Uncharacterized ACR, YdiU/UPF0061 family K01M1_09270 PF03480 Bacterial extracellular solute-binding protein, family 7 K01M1_09280 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component K01M1_09290 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component K01M1_09310 PF00072 Response regulator receiver domain K01M1_09310 PF00158 Sigma-54 interaction domain K01M1_09310 PF02954 Bacterial regulatory protein, Fis family K01M1_09320 PF02743 Cache domain K01M1_09320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K01M1_09320 PF00512 His Kinase A (phospho-acceptor) domain K01M1_09330 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase K01M1_09330 PF05697 Bacterial trigger factor protein (TF) K01M1_09330 PF05698 Bacterial trigger factor protein (TF) C-terminus K01M1_09340 PF00574 Clp protease K01M1_09350 PF06689 ClpX C4-type zinc finger K01M1_09350 PF07724 AAA domain (Cdc48 subfamily) K01M1_09350 PF10431 C-terminal, D2-small domain, of ClpB protein K01M1_09360 PF00004 ATPase family associated with various cellular activities (AAA) K01M1_09360 PF05362 Lon protease (S16) C-terminal proteolytic domain K01M1_09360 PF02190 ATP-dependent protease La (LON) substrate-binding domain K01M1_09370 PF00216 Bacterial DNA-binding protein K01M1_09380 PF13145 PPIC-type PPIASE domain K01M1_09420 PF13286 Phosphohydrolase-associated domain K01M1_09420 PF01966 HD domain K01M1_09440 PF00155 Aminotransferase class I and II K01M1_09450 PF00425 chorismate binding enzyme K01M1_09460 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K01M1_09460 PF16582 Middle domain of thiamine pyrophosphate K01M1_09460 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain K01M1_09470 PF12697 Alpha/beta hydrolase family K01M1_09480 PF00378 Enoyl-CoA hydratase/isomerase K01M1_09490 PF13378 Enolase C-terminal domain-like K01M1_09500 PF00501 AMP-binding enzyme K01M1_09500 PF13193 AMP-binding enzyme C-terminal domain K01M1_09520 PF03601 Conserved hypothetical protein 698 K01M1_09530 PF07690 Major Facilitator Superfamily K01M1_09620 PF00529 HlyD membrane-fusion protein of T1SS K01M1_09620 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion K01M1_09630 PF00873 AcrB/AcrD/AcrF family K01M1_09660 PF00291 Pyridoxal-phosphate dependent enzyme K01M1_09670 PF01037 Lrp/AsnC ligand binding domain K01M1_09670 PF13404 AsnC-type helix-turn-helix domain K01M1_09700 PF09619 Type III secretion system lipoprotein chaperone (YscW) K01M1_09710 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain K01M1_09730 PF08448 PAS fold K01M1_09730 PF00990 Diguanylate cyclase, GGDEF domain K01M1_09740 PF08032 RNA 2'-O ribose methyltransferase substrate binding K01M1_09740 PF00588 SpoU rRNA Methylase family K01M1_09750 PF00571 CBS domain K01M1_09750 PF00478 IMP dehydrogenase / GMP reductase domain K01M1_09760 PF00403 Heavy-metal-associated domain K01M1_09770 PF01048 Phosphorylase superfamily K01M1_09790 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K01M1_09790 PF00672 HAMP domain K01M1_09800 PF01230 HIT domain K01M1_09830 PF08139 Prokaryotic membrane lipoprotein lipid attachment site K01M1_09830 PF13036 Peptidoglycan-synthase activator LpoB K01M1_09850 PF05728 Uncharacterised protein family (UPF0227) K01M1_09860 PF07992 Pyridine nucleotide-disulphide oxidoreductase K01M1_09890 PF03461 TRCF domain K01M1_09890 PF17757 UvrB interaction domain K01M1_09890 PF02559 CarD-like/TRCF domain K01M1_09890 PF00270 DEAD/DEAH box helicase K01M1_09890 PF00271 Helicase conserved C-terminal domain K01M1_09910 PF02687 FtsX-like permease family K01M1_09910 PF12704 MacB-like periplasmic core domain K01M1_09920 PF00005 ABC transporter K01M1_09930 PF02687 FtsX-like permease family K01M1_09930 PF12704 MacB-like periplasmic core domain K01M1_09950 PF13567 Domain of unknown function (DUF4131) K01M1_09950 PF03772 Competence protein K01M1_09950 PF00753 Metallo-beta-lactamase superfamily K01M1_09960 PF00664 ABC transporter transmembrane region K01M1_09960 PF00005 ABC transporter K01M1_09970 PF02606 Tetraacyldisaccharide-1-P 4'-kinase K01M1_09980 PF03966 Trm112p-like protein K01M1_09990 PF02348 Cytidylyltransferase K01M1_10000 PF04293 SpoVR like protein K01M1_10010 PF04285 Protein of unknown function (DUF444) K01M1_10020 PF08298 PrkA AAA domain K01M1_10020 PF06798 PrkA serine protein kinase C-terminal domain K01M1_10030 PF03887 YfbU domain K01M1_10050 PF04055 Radical SAM superfamily K01M1_10070 PF02901 Pyruvate formate lyase-like K01M1_10070 PF01228 Glycine radical K01M1_10100 PF00005 ABC transporter K01M1_10110 PF00497 Bacterial extracellular solute-binding proteins, family 3 K01M1_10120 PF00528 Binding-protein-dependent transport system inner membrane component K01M1_10130 PF00528 Binding-protein-dependent transport system inner membrane component K01M1_10160 PF03372 Endonuclease/Exonuclease/phosphatase family K01M1_10170 PF10689 Protein of unknown function (DUF2496) K01M1_10180 PF07445 Primosomal replication protein priC K01M1_10190 PF01925 Sulfite exporter TauE/SafE K01M1_10200 PF13307 Helicase C-terminal domain K01M1_10200 PF06733 DEAD_2 K01M1_10230 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) K01M1_10240 PF00849 RNA pseudouridylate synthase K01M1_10250 PF03971 Monomeric isocitrate dehydrogenase K01M1_10260 PF00313 'Cold-shock' DNA-binding domain K01M1_10270 PF02617 ATP-dependent Clp protease adaptor protein ClpS K01M1_10280 PF00004 ATPase family associated with various cellular activities (AAA) K01M1_10280 PF07724 AAA domain (Cdc48 subfamily) K01M1_10280 PF10431 C-terminal, D2-small domain, of ClpB protein K01M1_10280 PF02861 Clp amino terminal domain, pathogenicity island component K01M1_10280 PF17871 AAA lid domain K01M1_10290 PF01176 Translation initiation factor 1A / IF-1 K01M1_10300 PF04377 Arginine-tRNA-protein transferase, C terminus K01M1_10300 PF04376 Arginine-tRNA-protein transferase, N terminus K01M1_10310 PF03588 Leucyl/phenylalanyl-tRNA protein transferase K01M1_10330 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) K01M1_10340 PF10692 Protein of unknown function (DUF2498) K01M1_10350 PF01396 Topoisomerase DNA binding C4 zinc finger K01M1_10350 PF01751 Toprim domain K01M1_10350 PF08272 Topoisomerase I zinc-ribbon-like K01M1_10350 PF01131 DNA topoisomerase K01M1_10360 PF00483 Nucleotidyl transferase K01M1_10370 PF08323 Starch synthase catalytic domain K01M1_10370 PF00534 Glycosyl transferases group 1 K01M1_10410 PF04994 TfoX C-terminal domain K01M1_10410 PF04993 TfoX N-terminal domain K01M1_10420 PF00356 Bacterial regulatory proteins, lacI family K01M1_10430 PF02613 Nitrate reductase delta subunit K01M1_10440 PF00072 Response regulator receiver domain K01M1_10440 PF00486 Transcriptional regulatory protein, C terminal K01M1_10450 PF02698 DUF218 domain K01M1_10470 PF17193 MukF C-terminal domain K01M1_10470 PF17192 MukF middle domain K01M1_10470 PF03882 MukF winged-helix domain K01M1_10480 PF04288 MukE-like family K01M1_10490 PF16330 MukB hinge domain K01M1_10490 PF04310 MukB N-terminal K01M1_10530 PF08443 RimK-like ATP-grasp domain K01M1_10530 PF18030 RimK PreATP-grasp domain K01M1_10540 PF08003 Protein of unknown function (DUF1698) K01M1_10550 PF13649 Methyltransferase domain K01M1_10560 PF01904 Protein of unknown function DUF72 K01M1_10570 PF00152 tRNA synthetases class II (D, K and N) K01M1_10570 PF01336 OB-fold nucleic acid binding domain K01M1_10570 PF02938 GAD domain K01M1_10580 PF01709 Transcriptional regulator K01M1_10590 PF02075 Crossover junction endodeoxyribonuclease RuvC K01M1_10600 PF07499 RuvA, C-terminal domain K01M1_10600 PF01330 RuvA N terminal domain K01M1_10610 PF17864 RuvB AAA lid domain K01M1_10610 PF05496 Holliday junction DNA helicase RuvB P-loop domain K01M1_10610 PF05491 RuvB C-terminal winged helix domain K01M1_10620 PF01654 Cytochrome bd terminal oxidase subunit I K01M1_10630 PF02322 Cytochrome bd terminal oxidase subunit II K01M1_10640 PF08173 Membrane bound YbgT-like protein K01M1_10660 PF03061 Thioesterase superfamily K01M1_10670 PF01618 MotA/TolQ/ExbB proton channel family K01M1_10680 PF02472 Biopolymer transport protein ExbD/TolR K01M1_10700 PF04052 TolB amino-terminal domain K01M1_10700 PF07676 WD40-like Beta Propeller Repeat K01M1_10710 PF00691 OmpA family K01M1_10720 PF13174 Tetratricopeptide repeat K01M1_10720 PF16331 TolA binding protein trimerisation K01M1_10730 PF02445 Quinolinate synthetase A protein K01M1_10750 PF03994 Domain of Unknown Function (DUF350) K01M1_10770 PF03738 Glutathionylspermidine synthase preATP-grasp K01M1_10790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K01M1_10790 PF09308 LuxQ, periplasmic K01M1_10790 PF00072 Response regulator receiver domain K01M1_10790 PF00512 His Kinase A (phospho-acceptor) domain K01M1_10800 PF06610 L-alanine exporter K01M1_10830 PF02322 Cytochrome bd terminal oxidase subunit II K01M1_10840 PF01654 Cytochrome bd terminal oxidase subunit I K01M1_10890 PF00529 HlyD membrane-fusion protein of T1SS K01M1_10890 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion K01M1_10900 PF00873 AcrB/AcrD/AcrF family K01M1_10930 PF00579 tRNA synthetases class I (W and Y) K01M1_10950 PF03372 Endonuclease/Exonuclease/phosphatase family K01M1_10970 PF00672 HAMP domain K01M1_10970 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K01M1_10980 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) K01M1_11000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K01M1_11000 PF03466 LysR substrate binding domain K01M1_11020 PF01262 Alanine dehydrogenase/PNT, C-terminal domain K01M1_11020 PF05222 Alanine dehydrogenase/PNT, N-terminal domain K01M1_11030 PF01037 Lrp/AsnC ligand binding domain K01M1_11040 PF13491 4TM region of DNA translocase FtsK/SpoIIIE K01M1_11040 PF17854 FtsK alpha domain K01M1_11040 PF09397 Ftsk gamma domain K01M1_11040 PF01580 FtsK/SpoIIIE family K01M1_11050 PF03548 Outer membrane lipoprotein carrier protein LolA K01M1_11060 PF12002 MgsA AAA+ ATPase C terminal K01M1_11060 PF00004 ATPase family associated with various cellular activities (AAA) K01M1_11060 PF16193 AAA C-terminal domain K01M1_11070 PF02403 Seryl-tRNA synthetase N-terminal domain K01M1_11070 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) K01M1_11100 PF01258 Prokaryotic dksA/traR C4-type zinc finger K01M1_11110 PF00202 Aminotransferase class-III K01M1_11120 PF06968 Biotin and Thiamin Synthesis associated domain K01M1_11120 PF04055 Radical SAM superfamily K01M1_11130 PF00155 Aminotransferase class I and II K01M1_11140 PF08241 Methyltransferase domain K01M1_11170 PF01435 Peptidase family M48 K01M1_11190 PF00106 short chain dehydrogenase K01M1_11240 PF16036 Chalcone isomerase-like K01M1_11260 PF00206 Lyase K01M1_11260 PF08328 Adenylosuccinate lyase C-terminal K01M1_11270 PF04356 Protein of unknown function (DUF489) K01M1_11300 PF00294 pfkB family carbohydrate kinase K01M1_11310 PF00816 H-NS histone family K01M1_11320 PF03553 Na+/H+ antiporter family K01M1_11330 PF01634 ATP phosphoribosyltransferase K01M1_11330 PF08029 HisG, C-terminal domain K01M1_11340 PF00815 Histidinol dehydrogenase K01M1_11350 PF00155 Aminotransferase class I and II K01M1_11360 PF00475 Imidazoleglycerol-phosphate dehydratase K01M1_11360 PF08645 Polynucleotide kinase 3 phosphatase K01M1_11370 PF00117 Glutamine amidotransferase class-I K01M1_11380 PF00977 Histidine biosynthesis protein K01M1_11390 PF00977 Histidine biosynthesis protein K01M1_11400 PF01502 Phosphoribosyl-AMP cyclohydrolase K01M1_11400 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase K01M1_11410 PF02810 SEC-C motif K01M1_11420 PF00563 EAL domain K01M1_11420 PF08668 HDOD domain K01M1_11430 PF00149 Calcineurin-like phosphoesterase K01M1_11440 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD K01M1_11450 PF09190 DALR domain K01M1_11450 PF01406 tRNA synthetases class I (C) catalytic domain K01M1_11460 PF00265 Thymidine kinase K01M1_11520 PF01226 Formate/nitrite transporter K01M1_11540 PF03649 Uncharacterised protein family (UPF0014) K01M1_11550 PF06796 Periplasmic nitrate reductase protein NapE K01M1_11560 PF03264 NapC/NirT cytochrome c family, N-terminal region K01M1_11570 PF18364 Molybdopterin oxidoreductase N-terminal domain K01M1_11570 PF01568 Molydopterin dinucleotide binding domain K01M1_11570 PF00384 Molybdopterin oxidoreductase K01M1_11580 PF16874 Glycosyl hydrolase family 36 C-terminal domain K01M1_11580 PF16875 Glycosyl hydrolase family 36 N-terminal domain K01M1_11600 PF01368 DHH family K01M1_11600 PF02833 DHHA2 domain K01M1_11620 PF00005 ABC transporter K01M1_11630 PF08352 Oligopeptide/dipeptide transporter, C-terminal region K01M1_11630 PF00005 ABC transporter K01M1_11640 PF12911 N-terminal TM domain of oligopeptide transport permease C K01M1_11640 PF00528 Binding-protein-dependent transport system inner membrane component K01M1_11650 PF00528 Binding-protein-dependent transport system inner membrane component K01M1_11660 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle K01M1_11670 PF02954 Bacterial regulatory protein, Fis family K01M1_11670 PF00158 Sigma-54 interaction domain K01M1_11680 PF04012 PspA/IM30 family K01M1_11690 PF06667 Phage shock protein B K01M1_11700 PF04024 PspC domain K01M1_11720 PF13533 Biotin-lipoyl like K01M1_11730 PF00873 AcrB/AcrD/AcrF family K01M1_11740 PF03352 Methyladenine glycosylase K01M1_11750 PF03280 Proteobacterial lipase chaperone protein K01M1_11760 PF00561 alpha/beta hydrolase fold K01M1_11770 PF01053 Cys/Met metabolism PLP-dependent enzyme K01M1_11780 PF13091 PLD-like domain K01M1_11780 PF13396 Phospholipase_D-nuclease N-terminal K01M1_11790 PF00209 Sodium:neurotransmitter symporter family K01M1_11800 PF00849 RNA pseudouridylate synthase K01M1_11820 PF00111 2Fe-2S iron-sulfur cluster binding domain K01M1_11820 PF00175 Oxidoreductase NAD-binding domain K01M1_11820 PF00970 Oxidoreductase FAD-binding domain K01M1_11830 PF03063 Prismane/CO dehydrogenase family K01M1_11840 PF01590 GAF domain K01M1_11840 PF00158 Sigma-54 interaction domain K01M1_11860 PF01066 CDP-alcohol phosphatidyltransferase K01M1_11870 PF00005 ABC transporter K01M1_11880 PF00528 Binding-protein-dependent transport system inner membrane component K01M1_11890 PF13416 Bacterial extracellular solute-binding protein K01M1_11920 PF02872 5'-nucleotidase, C-terminal domain K01M1_11920 PF00149 Calcineurin-like phosphoesterase K01M1_11940 PF01386 Ribosomal L25p family K01M1_11950 PF00512 His Kinase A (phospho-acceptor) domain K01M1_11950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K01M1_11950 PF00672 HAMP domain K01M1_11960 PF00486 Transcriptional regulatory protein, C terminal K01M1_11960 PF00072 Response regulator receiver domain K01M1_11980 PF00271 Helicase conserved C-terminal domain K01M1_11980 PF04851 Type III restriction enzyme, res subunit K01M1_11990 PF00849 RNA pseudouridylate synthase K01M1_11990 PF01479 S4 domain K01M1_12000 PF07690 Major Facilitator Superfamily K01M1_12020 PF13460 NAD(P)H-binding K01M1_12020 PF11066 Protein of unknown function (DUF2867) K01M1_12030 PF01554 MatE K01M1_12040 PF00005 ABC transporter K01M1_12070 PF06965 Na+/H+ antiporter 1 K01M1_12080 PF00440 Bacterial regulatory proteins, tetR family K01M1_12080 PF16295 Tetracyclin repressor-like, C-terminal domain K01M1_12090 PF02770 Acyl-CoA dehydrogenase, middle domain K01M1_12090 PF00441 Acyl-CoA dehydrogenase, C-terminal domain K01M1_12090 PF09317 Domain of unknown function (DUF1974) K01M1_12090 PF02771 Acyl-CoA dehydrogenase, N-terminal domain K01M1_12100 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase K01M1_12100 PF07055 Enoyl reductase FAD binding domain K01M1_12100 PF12241 Trans-2-enoyl-CoA reductase catalytic region K01M1_12110 PF02080 TrkA-C domain K01M1_12110 PF06826 Predicted Permease Membrane Region K01M1_12120 PF00462 Glutaredoxin K01M1_12140 PF00465 Iron-containing alcohol dehydrogenase K01M1_12150 PF01380 SIS domain K01M1_12150 PF01418 Helix-turn-helix domain, rpiR family K01M1_12160 PF00282 Pyridoxal-dependent decarboxylase conserved domain K01M1_12180 PF03956 Lysine exporter LysO K01M1_12200 PF04993 TfoX N-terminal domain K01M1_12200 PF04994 TfoX C-terminal domain K01M1_12240 PF00497 Bacterial extracellular solute-binding proteins, family 3 K01M1_12240 PF00512 His Kinase A (phospho-acceptor) domain K01M1_12240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K01M1_12260 PF00266 Aminotransferase class-V K01M1_12270 PF00291 Pyridoxal-phosphate dependent enzyme K01M1_12280 PF00664 ABC transporter transmembrane region K01M1_12280 PF00005 ABC transporter K01M1_12290 PF00664 ABC transporter transmembrane region K01M1_12290 PF00005 ABC transporter K01M1_12300 PF07992 Pyridine nucleotide-disulphide oxidoreductase K01M1_12320 PF00266 Aminotransferase class-V K01M1_12340 PF00072 Response regulator receiver domain K01M1_12340 PF00990 Diguanylate cyclase, GGDEF domain K01M1_12350 PF00939 Sodium:sulfate symporter transmembrane region K01M1_12360 PF02698 DUF218 domain K01M1_12370 PF03949 Malic enzyme, NAD binding domain K01M1_12370 PF00390 Malic enzyme, N-terminal domain K01M1_12380 PF11898 Domain of unknown function (DUF3418) K01M1_12380 PF00270 DEAD/DEAH box helicase K01M1_12380 PF04408 Helicase associated domain (HA2) K01M1_12380 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold K01M1_12380 PF00271 Helicase conserved C-terminal domain K01M1_12400 PF16655 PhoD-like phosphatase, N-terminal domain K01M1_12400 PF09423 PhoD-like phosphatase K01M1_12410 PF01259 SAICAR synthetase K01M1_12450 PF00691 OmpA family K01M1_12450 PF05736 OprF membrane domain K01M1_12480 PF01565 FAD binding domain K01M1_12480 PF13183 4Fe-4S dicluster domain K01M1_12480 PF02913 FAD linked oxidases, C-terminal domain K01M1_12490 PF04191 Phospholipid methyltransferase K01M1_12510 PF00221 Aromatic amino acid lyase K01M1_12520 PF17391 Urocanase N-terminal domain K01M1_12520 PF01175 Urocanase Rossmann-like domain K01M1_12520 PF17392 Urocanase C-terminal domain K01M1_12530 PF00491 Arginase family K01M1_12540 PF01979 Amidohydrolase family K01M1_12550 PF07702 UTRA domain K01M1_12550 PF00392 Bacterial regulatory proteins, gntR family K01M1_12580 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain K01M1_12580 PF03129 Anticodon binding domain K01M1_12580 PF02824 TGS domain K01M1_12580 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) K01M1_12590 PF05198 Translation initiation factor IF-3, N-terminal domain K01M1_12590 PF00707 Translation initiation factor IF-3, C-terminal domain K01M1_12600 PF01632 Ribosomal protein L35 K01M1_12610 PF00453 Ribosomal protein L20 K01M1_12620 PF01906 Putative heavy-metal-binding K01M1_12690 PF01409 tRNA synthetases class II core domain (F) K01M1_12690 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain K01M1_12700 PF03483 B3/4 domain K01M1_12700 PF03484 tRNA synthetase B5 domain K01M1_12700 PF03147 Ferredoxin-fold anticodon binding domain K01M1_12700 PF01588 Putative tRNA binding domain K01M1_12700 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain K01M1_12720 PF00216 Bacterial DNA-binding protein K01M1_12740 PF05724 Thiopurine S-methyltransferase (TPMT) K01M1_12750 PF02222 ATP-grasp domain K01M1_12760 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region K01M1_12760 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region K01M1_12770 PF04172 LrgB-like family K01M1_12780 PF03788 LrgA family K01M1_12790 PF00929 Exonuclease K01M1_12790 PF08411 Exonuclease C-terminal K01M1_12910 PF03119 NAD-dependent DNA ligase C4 zinc finger domain K01M1_12910 PF01653 NAD-dependent DNA ligase adenylation domain K01M1_12910 PF00533 BRCA1 C Terminus (BRCT) domain K01M1_12910 PF12826 Helix-hairpin-helix motif K01M1_12910 PF03120 NAD-dependent DNA ligase OB-fold domain K01M1_12970 PF01695 IstB-like ATP binding protein K01M1_13270 PF13460 NAD(P)H-binding K01M1_13280 PF02277 Phosphoribosyltransferase K01M1_13290 PF02654 Cobalamin-5-phosphate synthase K01M1_13300 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase K01M1_13330 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family K01M1_13340 PF01032 FecCD transport family K01M1_13350 PF00005 ABC transporter K01M1_13390 PF03466 LysR substrate binding domain K01M1_13390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K01M1_13410 PF01863 Protein of unknown function DUF45 K01M1_13420 PF05971 RNA methyltransferase K01M1_13460 PF00392 Bacterial regulatory proteins, gntR family K01M1_13470 PF00171 Aldehyde dehydrogenase family K01M1_13480 PF05544 Proline racemase K01M1_13490 PF01266 FAD dependent oxidoreductase K01M1_13490 PF05430 S-adenosyl-L-methionine-dependent methyltransferase K01M1_13510 PF02423 Ornithine cyclodeaminase/mu-crystallin family K01M1_13520 PF00701 Dihydrodipicolinate synthetase family K01M1_13530 PF00005 ABC transporter K01M1_13530 PF08402 TOBE domain K01M1_13540 PF00528 Binding-protein-dependent transport system inner membrane component K01M1_13550 PF00528 Binding-protein-dependent transport system inner membrane component K01M1_13570 PF08453 Peptidase family M9 N-terminal K01M1_13570 PF01752 Collagenase K01M1_13590 PF08352 Oligopeptide/dipeptide transporter, C-terminal region K01M1_13590 PF00005 ABC transporter K01M1_13600 PF08352 Oligopeptide/dipeptide transporter, C-terminal region K01M1_13600 PF00005 ABC transporter K01M1_13610 PF00528 Binding-protein-dependent transport system inner membrane component K01M1_13610 PF12911 N-terminal TM domain of oligopeptide transport permease C K01M1_13620 PF00528 Binding-protein-dependent transport system inner membrane component K01M1_13630 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle K01M1_13640 PF01546 Peptidase family M20/M25/M40 K01M1_13640 PF07687 Peptidase dimerisation domain K01M1_13650 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K01M1_13660 PF04209 homogentisate 1,2-dioxygenase K01M1_13680 PF14497 Glutathione S-transferase, C-terminal domain K01M1_13680 PF02798 Glutathione S-transferase, N-terminal domain K01M1_13780 PF07007 Lysozyme inhibitor LprI K01M1_13830 PF02694 Uncharacterised BCR, YnfA/UPF0060 family K01M1_13860 PF03553 Na+/H+ antiporter family K01M1_13870 PF00120 Glutamine synthetase, catalytic domain K01M1_13880 PF07722 Peptidase C26 K01M1_13890 PF07883 Cupin domain K01M1_13890 PF01381 Helix-turn-helix K01M1_13900 PF00171 Aldehyde dehydrogenase family K01M1_13910 PF01266 FAD dependent oxidoreductase K01M1_13920 PF00795 Carbon-nitrogen hydrolase K01M1_13930 PF04371 Porphyromonas-type peptidyl-arginine deiminase K01M1_13940 PF00171 Aldehyde dehydrogenase family K01M1_13950 PF00202 Aminotransferase class-III K01M1_13960 PF12792 CSS motif domain associated with EAL K01M1_13960 PF00563 EAL domain K01M1_13980 PF01047 MarR family K01M1_13990 PF04237 YjbR K01M1_14040 PF00672 HAMP domain K01M1_14040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K01M1_14040 PF00512 His Kinase A (phospho-acceptor) domain K01M1_14040 PF01627 Hpt domain K01M1_14040 PF00072 Response regulator receiver domain K01M1_14040 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) K01M1_14050 PF00563 EAL domain K01M1_14050 PF00990 Diguanylate cyclase, GGDEF domain K01M1_14050 PF03707 Bacterial signalling protein N terminal repeat K01M1_14080 PF04204 Homoserine O-succinyltransferase K01M1_14100 PF00893 Small Multidrug Resistance protein K01M1_14110 PF03279 Bacterial lipid A biosynthesis acyltransferase K01M1_14130 PF13408 Recombinase zinc beta ribbon domain K01M1_14130 PF07508 Recombinase K01M1_14130 PF00239 Resolvase, N terminal domain K01M1_14190 PF02796 Helix-turn-helix domain of resolvase K01M1_14190 PF00239 Resolvase, N terminal domain K01M1_14370 PF02074 Carboxypeptidase Taq (M32) metallopeptidase K01M1_14380 PF01810 LysE type translocator K01M1_14400 PF01235 Sodium:alanine symporter family K01M1_14450 PF00884 Sulfatase K01M1_14460 PF04069 Substrate binding domain of ABC-type glycine betaine transport system K01M1_14470 PF00528 Binding-protein-dependent transport system inner membrane component K01M1_14480 PF00005 ABC transporter K01M1_14480 PF00571 CBS domain K01M1_14510 PF02028 BCCT, betaine/carnitine/choline family transporter K01M1_14520 PF00583 Acetyltransferase (GNAT) family K01M1_14530 PF00202 Aminotransferase class-III K01M1_14540 PF06339 Ectoine synthase K01M1_14550 PF00696 Amino acid kinase family K01M1_14550 PF13840 ACT domain K01M1_14560 PF00884 Sulfatase K01M1_14580 PF03781 Sulfatase-modifying factor enzyme 1 K01M1_14590 PF13186 Iron-sulfur cluster-binding domain K01M1_14590 PF04055 Radical SAM superfamily K01M1_14620 PF00884 Sulfatase K01M1_14630 PF00884 Sulfatase K01M1_14650 PF03412 Peptidase C39 family K01M1_14650 PF00005 ABC transporter K01M1_14650 PF00664 ABC transporter transmembrane region K01M1_14670 PF02321 Outer membrane efflux protein K01M1_14700 PF00455 DeoR C terminal sensor domain K01M1_14700 PF08220 DeoR-like helix-turn-helix domain K01M1_14710 PF02894 Oxidoreductase family, C-terminal alpha/beta domain K01M1_14710 PF01408 Oxidoreductase family, NAD-binding Rossmann fold K01M1_14720 PF03928 Haem-degrading K01M1_14730 PF00990 Diguanylate cyclase, GGDEF domain K01M1_14730 PF00072 Response regulator receiver domain K01M1_14770 PF00939 Sodium:sulfate symporter transmembrane region K01M1_14780 PF00512 His Kinase A (phospho-acceptor) domain K01M1_14780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K01M1_14790 PF02954 Bacterial regulatory protein, Fis family K01M1_14790 PF00072 Response regulator receiver domain K01M1_14790 PF00158 Sigma-54 interaction domain K01M1_14800 PF00563 EAL domain K01M1_14800 PF00990 Diguanylate cyclase, GGDEF domain K01M1_14800 PF03707 Bacterial signalling protein N terminal repeat K01M1_14810 PF01966 HD domain K01M1_14810 PF11871 Domain of unknown function (DUF3391) K01M1_14820 PF01810 LysE type translocator K01M1_14830 PF11230 Protein of unknown function (DUF3029) K01M1_14840 PF04055 Radical SAM superfamily K01M1_14860 PF03741 Integral membrane protein TerC family K01M1_14880 PF01966 HD domain K01M1_14890 PF00465 Iron-containing alcohol dehydrogenase K01M1_14900 PF03222 Tryptophan/tyrosine permease family K01M1_14910 PF11871 Domain of unknown function (DUF3391) K01M1_14910 PF01966 HD domain K01M1_14930 PF00005 ABC transporter K01M1_14940 PF01497 Periplasmic binding protein K01M1_14950 PF01032 FecCD transport family K01M1_14960 PF00593 TonB dependent receptor K01M1_14960 PF07715 TonB-dependent Receptor Plug Domain K01M1_14980 PF00664 ABC transporter transmembrane region K01M1_14980 PF00005 ABC transporter K01M1_14990 PF00664 ABC transporter transmembrane region K01M1_14990 PF00005 ABC transporter K01M1_15000 PF08334 Type II secretion system (T2SS), protein G K01M1_15000 PF07963 Prokaryotic N-terminal methylation motif K01M1_15020 PF03466 LysR substrate binding domain K01M1_15020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K01M1_15040 PF01408 Oxidoreductase family, NAD-binding Rossmann fold K01M1_15040 PF02894 Oxidoreductase family, C-terminal alpha/beta domain K01M1_15070 PF00012 Hsp70 protein K01M1_15080 PF00012 Hsp70 protein K01M1_15100 PF00990 Diguanylate cyclase, GGDEF domain K01M1_15180 PF02525 Flavodoxin-like fold K01M1_15190 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold K01M1_15190 PF00271 Helicase conserved C-terminal domain K01M1_15190 PF04408 Helicase associated domain (HA2) K01M1_15190 PF11898 Domain of unknown function (DUF3418) K01M1_15190 PF00270 DEAD/DEAH box helicase K01M1_15220 PF02028 BCCT, betaine/carnitine/choline family transporter K01M1_15240 PF02397 Bacterial sugar transferase K01M1_15260 PF00534 Glycosyl transferases group 1 K01M1_15260 PF13439 Glycosyltransferase Family 4 K01M1_15320 PF00534 Glycosyl transferases group 1 K01M1_15320 PF13439 Glycosyltransferase Family 4 K01M1_15330 PF13439 Glycosyltransferase Family 4 K01M1_15330 PF00534 Glycosyl transferases group 1 K01M1_15340 PF00072 Response regulator receiver domain K01M1_15340 PF02954 Bacterial regulatory protein, Fis family K01M1_15340 PF00158 Sigma-54 interaction domain K01M1_15370 PF02563 Polysaccharide biosynthesis/export protein K01M1_15370 PF10531 SLBB domain K01M1_15390 PF01740 STAS domain K01M1_15410 PF14743 DNA ligase OB-like domain K01M1_15410 PF01068 ATP dependent DNA ligase domain K01M1_15430 PF01554 MatE K01M1_15440 PF00677 Lumazine binding domain K01M1_15470 PF01339 CheB methylesterase K01M1_15470 PF00072 Response regulator receiver domain K01M1_15480 PF00990 Diguanylate cyclase, GGDEF domain K01M1_15480 PF05230 MASE2 domain K01M1_15500 PF00877 NlpC/P60 family K01M1_15580 PF00480 ROK family K01M1_15600 PF03454 MoeA C-terminal region (domain IV) K01M1_15600 PF00994 Probable molybdopterin binding domain K01M1_15600 PF03453 MoeA N-terminal region (domain I and II) K01M1_15610 PF12804 MobA-like NTP transferase domain K01M1_15620 PF00005 ABC transporter K01M1_15620 PF08402 TOBE domain K01M1_15630 PF00528 Binding-protein-dependent transport system inner membrane component K01M1_15640 PF12849 PBP superfamily domain K01M1_15650 PF02954 Bacterial regulatory protein, Fis family K01M1_15650 PF00072 Response regulator receiver domain K01M1_15650 PF00158 Sigma-54 interaction domain K01M1_15660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K01M1_15660 PF00512 His Kinase A (phospho-acceptor) domain K01M1_15670 PF12848 ABC transporter K01M1_15670 PF00005 ABC transporter K01M1_15690 PF02634 FdhD/NarQ family K01M1_15730 PF02613 Nitrate reductase delta subunit K01M1_15750 PF04879 Molybdopterin oxidoreductase Fe4S4 domain K01M1_15750 PF01568 Molydopterin dinucleotide binding domain K01M1_15750 PF00384 Molybdopterin oxidoreductase K01M1_15760 PF13247 4Fe-4S dicluster domain K01M1_15810 PF00909 Ammonium Transporter Family K01M1_15830 PF02146 Sir2 family K01M1_15840 PF13416 Bacterial extracellular solute-binding protein K01M1_15850 PF13416 Bacterial extracellular solute-binding protein K01M1_15860 PF00528 Binding-protein-dependent transport system inner membrane component K01M1_15870 PF00528 Binding-protein-dependent transport system inner membrane component K01M1_15880 PF08402 TOBE domain K01M1_15880 PF00005 ABC transporter K01M1_15920 PF01171 PP-loop family K01M1_15930 PF00582 Universal stress protein family K01M1_15940 PF13545 Crp-like helix-turn-helix domain K01M1_15940 PF00027 Cyclic nucleotide-binding domain K01M1_15970 PF00403 Heavy-metal-associated domain K01M1_15990 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP K01M1_15990 PF13442 Cytochrome C oxidase, cbb3-type, subunit III K01M1_16020 PF00115 Cytochrome C and Quinol oxidase polypeptide I K01M1_16050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K01M1_16050 PF09308 LuxQ, periplasmic K01M1_16050 PF00072 Response regulator receiver domain K01M1_16050 PF00512 His Kinase A (phospho-acceptor) domain K01M1_16080 PF17414 MatP C-terminal ribbon-helix-helix domain K01M1_16080 PF06303 MatP N-terminal domain K01M1_16090 PF13654 AAA domain K01M1_16090 PF05362 Lon protease (S16) C-terminal proteolytic domain K01M1_16100 PF07977 FabA-like domain K01M1_16110 PF04957 Ribosome modulation factor K01M1_16150 PF10672 S-adenosylmethionine-dependent methyltransferase K01M1_16150 PF01170 Putative RNA methylase family UPF0020 K01M1_16150 PF02926 THUMP domain K01M1_16160 PF07126 Cell-division protein ZapC K01M1_16170 PF01180 Dihydroorotate dehydrogenase K01M1_16180 PF05088 Bacterial NAD-glutamate dehydrogenase K01M1_16190 PF17432 Domain of unknown function (DUF3458_C) ARM repeats K01M1_16190 PF01433 Peptidase family M1 domain K01M1_16190 PF11940 Domain of unknown function (DUF3458) Ig-like fold K01M1_16210 PF17804 Tail specific protease N-terminal domain K01M1_16210 PF11818 C-terminal domain of tail specific protease (DUF3340) K01M1_16210 PF00595 PDZ domain K01M1_16210 PF03572 Peptidase family S41 K01M1_16220 PF04352 ProQ/FINO family K01M1_16220 PF17516 ProQ C-terminal domain K01M1_16230 PF13185 GAF domain K01M1_16240 PF00664 ABC transporter transmembrane region K01M1_16240 PF00005 ABC transporter K01M1_16250 PF04403 Paraquat-inducible protein A K01M1_16260 PF02470 MlaD protein K01M1_16270 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF K01M1_16270 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF K01M1_16270 PF01189 16S rRNA methyltransferase RsmB/F K01M1_16310 PF00793 DAHP synthetase I family K01M1_16320 PF04461 Protein of unknown function (DUF520) K01M1_16330 PF14824 Sirohaem biosynthesis protein central K01M1_16330 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases K01M1_16330 PF10414 Sirohaem synthase dimerisation region K01M1_16340 PF00497 Bacterial extracellular solute-binding proteins, family 3 K01M1_16360 PF00528 Binding-protein-dependent transport system inner membrane component K01M1_16370 PF00528 Binding-protein-dependent transport system inner membrane component K01M1_16380 PF00005 ABC transporter K01M1_16390 PF01027 Inhibitor of apoptosis-promoting Bax1 K01M1_16410 PF04358 DsrC like protein K01M1_16420 PF00708 Acylphosphatase K01M1_16430 PF17200 Single Cache domain 2 K01M1_16430 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K01M1_16430 PF00672 HAMP domain K01M1_16440 PF10672 S-adenosylmethionine-dependent methyltransferase K01M1_16440 PF17785 PUA-like domain K01M1_16470 PF00691 OmpA family K01M1_16500 PF05736 OprF membrane domain K01M1_16500 PF00691 OmpA family K01M1_16520 PF00990 Diguanylate cyclase, GGDEF domain K01M1_16530 PF01614 Bacterial transcriptional regulator K01M1_16530 PF09339 IclR helix-turn-helix domain K01M1_16550 PF00248 Aldo/keto reductase family K01M1_16560 PF03466 LysR substrate binding domain K01M1_16560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K01M1_16580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K01M1_16580 PF03466 LysR substrate binding domain K01M1_16590 PF07690 Major Facilitator Superfamily K01M1_16610 PF14765 Polyketide synthase dehydratase K01M1_16610 PF02801 Beta-ketoacyl synthase, C-terminal domain K01M1_16610 PF00550 Phosphopantetheine attachment site K01M1_16610 PF16197 Ketoacyl-synthetase C-terminal extension K01M1_16610 PF08659 KR domain K01M1_16610 PF08240 Alcohol dehydrogenase GroES-like domain K01M1_16610 PF00698 Acyl transferase domain K01M1_16610 PF00107 Zinc-binding dehydrogenase K01M1_16610 PF00109 Beta-ketoacyl synthase, N-terminal domain K01M1_16620 PF12833 Helix-turn-helix domain K01M1_16620 PF02311 AraC-like ligand binding domain K01M1_16630 PF00857 Isochorismatase family K01M1_16640 PF00497 Bacterial extracellular solute-binding proteins, family 3 K01M1_16660 PF08240 Alcohol dehydrogenase GroES-like domain K01M1_16660 PF00107 Zinc-binding dehydrogenase K01M1_16670 PF02310 B12 binding domain K01M1_16670 PF00809 Pterin binding enzyme K01M1_16670 PF02607 B12 binding domain K01M1_16670 PF02574 Homocysteine S-methyltransferase K01M1_16670 PF02965 Vitamin B12 dependent methionine synthase, activation domain K01M1_16680 PF00005 ABC transporter K01M1_16690 PF00528 Binding-protein-dependent transport system inner membrane component K01M1_16700 PF00497 Bacterial extracellular solute-binding proteins, family 3 K01M1_16730 PF00267 Gram-negative porin K01M1_16740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K01M1_16740 PF03466 LysR substrate binding domain K01M1_16760 PF00873 AcrB/AcrD/AcrF family K01M1_16770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K01M1_16770 PF03466 LysR substrate binding domain K01M1_16790 PF03466 LysR substrate binding domain K01M1_16790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K01M1_16800 PF01810 LysE type translocator K01M1_16820 PF06508 Queuosine biosynthesis protein QueC K01M1_16830 PF04055 Radical SAM superfamily K01M1_16860 PF00089 Trypsin K01M1_16880 PF13193 AMP-binding enzyme C-terminal domain K01M1_16880 PF00501 AMP-binding enzyme K01M1_16880 PF16177 Acetyl-coenzyme A synthetase N-terminus K01M1_16890 PF04303 PrpF protein K01M1_16900 PF00330 Aconitase family (aconitate hydratase) K01M1_16900 PF00694 Aconitase C-terminal domain K01M1_16910 PF00285 Citrate synthase, C-terminal domain K01M1_16970 PF01970 Tripartite tricarboxylate transporter TctA family K01M1_16990 PF01925 Sulfite exporter TauE/SafE K01M1_17000 PF16868 NMT1-like family K01M1_17010 PF05844 YopD protein K01M1_17030 PF07720 Tetratricopeptide repeat K01M1_17040 PF04792 V antigen (LcrV) protein K01M1_17060 PF09621 Type III secretion system regulator (LcrR) K01M1_17070 PF00771 FHIPEP family K01M1_17110 PF09059 TyeA K01M1_17130 PF18269 T3SS EscN ATPase C-terminal domain K01M1_17130 PF02874 ATP synthase alpha/beta family, beta-barrel domain K01M1_17130 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain K01M1_17160 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term K01M1_17170 PF00813 FliP family K01M1_17180 PF01313 Bacterial export proteins, family 3 K01M1_17190 PF01311 Bacterial export proteins, family 1 K01M1_17200 PF01312 FlhB HrpN YscU SpaS Family K01M1_17210 PF12833 Helix-turn-helix domain K01M1_17210 PF12852 Cupin K01M1_17270 PF02661 Fic/DOC family K01M1_17290 PF02108 Flagellar assembly protein FliH K01M1_17310 PF01514 Secretory protein of YscJ/FliF family K01M1_17320 PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI K01M1_17340 PF09477 Bacterial type II secretion system chaperone protein (type_III_yscG) K01M1_17350 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF K01M1_17370 PF16697 Inner membrane component of T3SS, cytoplasmic domain K01M1_17370 PF16693 Inner membrane component of T3SS, periplasmic domain K01M1_17410 PF12833 Helix-turn-helix domain K01M1_17450 PF00171 Aldehyde dehydrogenase family K01M1_17460 PF01590 GAF domain K01M1_17460 PF02954 Bacterial regulatory protein, Fis family K01M1_17460 PF00158 Sigma-54 interaction domain K01M1_17490 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain K01M1_17490 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase K01M1_17500 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase K01M1_17510 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain K01M1_17510 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain K01M1_17520 PF12833 Helix-turn-helix domain K01M1_17520 PF02311 AraC-like ligand binding domain K01M1_17530 PF00593 TonB dependent receptor K01M1_17530 PF07715 TonB-dependent Receptor Plug Domain K01M1_17540 PF12431 Transcriptional regulator K01M1_17540 PF00072 Response regulator receiver domain K01M1_17550 PF17203 Single cache domain 3 K01M1_17550 PF00989 PAS fold K01M1_17550 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain K01M1_17550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K01M1_17580 PF13533 Biotin-lipoyl like K01M1_17610 PF03466 LysR substrate binding domain K01M1_17610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K01M1_17640 PF08543 Phosphomethylpyrimidine kinase K01M1_17650 PF00155 Aminotransferase class I and II K01M1_17660 PF06826 Predicted Permease Membrane Region K01M1_17660 PF02080 TrkA-C domain K01M1_17680 PF13533 Biotin-lipoyl like K01M1_17730 PF00135 Carboxylesterase family K01M1_17760 PF17243 POTRA domain TamA domain 1 K01M1_17760 PF01103 Surface antigen K01M1_17770 PF11008 Protein of unknown function (DUF2846) K01M1_17780 PF01810 LysE type translocator K01M1_17790 PF01810 LysE type translocator K01M1_17800 PF07237 Protein of unknown function (DUF1428) K01M1_17840 PF02272 DHHA1 domain K01M1_17840 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain K01M1_17840 PF01411 tRNA synthetases class II (A) K01M1_17850 PF13302 Acetyltransferase (GNAT) domain K01M1_17860 PF12464 Maltose acetyltransferase K01M1_17860 PF14602 Hexapeptide repeat of succinyl-transferase K01M1_17940 PF00665 Integrase core domain K01M1_17940 PF13276 HTH-like domain K01M1_17940 PF13333 Integrase core domain K01M1_17990 PF04463 Protein of unknown function (DUF523) K01M1_18000 PF00583 Acetyltransferase (GNAT) family K01M1_18110 PF00665 Integrase core domain K01M1_18110 PF13333 Integrase core domain K01M1_18110 PF13276 HTH-like domain K01M1_18160 PF01844 HNH endonuclease K01M1_18290 PF00589 Phage integrase family K01M1_18290 PF13495 Phage integrase, N-terminal SAM-like domain K01M1_18320 PF00990 Diguanylate cyclase, GGDEF domain K01M1_18330 PF00665 Integrase core domain K01M1_18340 PF06826 Predicted Permease Membrane Region K01M1_18350 PF00282 Pyridoxal-dependent decarboxylase conserved domain K01M1_18360 PF01544 CorA-like Mg2+ transporter protein K01M1_18380 PF01699 Sodium/calcium exchanger protein K01M1_18390 PF01699 Sodium/calcium exchanger protein K01M1_18420 PF04632 Fusaric acid resistance protein family K01M1_18430 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion K01M1_18430 PF00529 HlyD membrane-fusion protein of T1SS K01M1_18450 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family K01M1_18470 PF06826 Predicted Permease Membrane Region K01M1_18470 PF02080 TrkA-C domain K01M1_18480 PF00999 Sodium/hydrogen exchanger family K01M1_18500 PF13817 IS66 C-terminal element K01M1_18500 PF13007 Transposase C of IS166 homeodomain K01M1_18500 PF13005 zinc-finger binding domain of transposase IS66 K01M1_18500 PF03050 Transposase IS66 family K01M1_18520 PF04976 DMSO reductase anchor subunit (DmsC) K01M1_18530 PF13247 4Fe-4S dicluster domain K01M1_18530 PF12800 4Fe-4S binding domain K01M1_18540 PF04879 Molybdopterin oxidoreductase Fe4S4 domain K01M1_18540 PF00384 Molybdopterin oxidoreductase K01M1_18540 PF01568 Molydopterin dinucleotide binding domain K01M1_18550 PF02613 Nitrate reductase delta subunit K01M1_18560 PF12838 4Fe-4S dicluster domain K01M1_18560 PF00037 4Fe-4S binding domain K01M1_18570 PF00512 His Kinase A (phospho-acceptor) domain K01M1_18570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K01M1_18570 PF00072 Response regulator receiver domain K01M1_18570 PF09308 LuxQ, periplasmic K01M1_18660 PF02954 Bacterial regulatory protein, Fis family K01M1_18660 PF00072 Response regulator receiver domain K01M1_18660 PF00158 Sigma-54 interaction domain K01M1_18670 PF13185 GAF domain K01M1_18670 PF02954 Bacterial regulatory protein, Fis family K01M1_18670 PF00158 Sigma-54 interaction domain K01M1_18710 PF07274 Protein of unknown function (DUF1440) K01M1_18720 PF00990 Diguanylate cyclase, GGDEF domain K01M1_18720 PF10442 FIST C domain K01M1_18720 PF00563 EAL domain K01M1_18720 PF08495 FIST N domain K01M1_18730 PF00072 Response regulator receiver domain K01M1_18730 PF00196 Bacterial regulatory proteins, luxR family K01M1_18790 PF01389 OmpA-like transmembrane domain K01M1_18790 PF00691 OmpA family K01M1_18870 PF01915 Glycosyl hydrolase family 3 C-terminal domain K01M1_18870 PF00933 Glycosyl hydrolase family 3 N terminal domain K01M1_18870 PF14310 Fibronectin type III-like domain K01M1_18880 PF13737 Transposase DDE domain K01M1_18890 PF00512 His Kinase A (phospho-acceptor) domain K01M1_18890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K01M1_18890 PF00072 Response regulator receiver domain K01M1_18890 PF01627 Hpt domain K01M1_18890 PF00989 PAS fold K01M1_18890 PF00497 Bacterial extracellular solute-binding proteins, family 3 K01M1_18900 PF00072 Response regulator receiver domain K01M1_18900 PF00196 Bacterial regulatory proteins, luxR family K01M1_18920 PF13737 Transposase DDE domain K01M1_18930 PF00816 H-NS histone family K01M1_18950 PF13737 Transposase DDE domain K01M1_19020 PF00857 Isochorismatase family K01M1_19150 PF09905 DNA-binding protein VF530 K01M1_19180 PF13495 Phage integrase, N-terminal SAM-like domain K01M1_19180 PF00589 Phage integrase family K01M1_19210 PF13302 Acetyltransferase (GNAT) domain K01M1_19220 PF18024 Helix-turn-helix domain K01M1_19220 PF00158 Sigma-54 interaction domain K01M1_19230 PF05128 Domain of unknown function (DUF697) K01M1_19240 PF04317 YcjX-like family, DUF463 K01M1_19270 PF04715 Anthranilate synthase component I, N terminal region K01M1_19270 PF00425 chorismate binding enzyme K01M1_19280 PF00512 His Kinase A (phospho-acceptor) domain K01M1_19280 PF09308 LuxQ, periplasmic K01M1_19280 PF00072 Response regulator receiver domain K01M1_19280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K01M1_19300 PF00293 NUDIX domain K01M1_19310 PF03222 Tryptophan/tyrosine permease family K01M1_19320 PF03315 Serine dehydratase beta chain K01M1_19320 PF03313 Serine dehydratase alpha chain K01M1_19330 PF00563 EAL domain K01M1_19330 PF04940 Sensors of blue-light using FAD K01M1_19350 PF01242 6-pyruvoyl tetrahydropterin synthase K01M1_19360 PF00672 HAMP domain K01M1_19360 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K01M1_19360 PF17200 Single Cache domain 2 K01M1_19370 PF00152 tRNA synthetases class II (D, K and N) K01M1_19370 PF01336 OB-fold nucleic acid binding domain K01M1_19390 PF00155 Aminotransferase class I and II K01M1_19390 PF00392 Bacterial regulatory proteins, gntR family K01M1_19420 PF00155 Aminotransferase class I and II K01M1_19460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K01M1_19460 PF00672 HAMP domain K01M1_19470 PF02028 BCCT, betaine/carnitine/choline family transporter K01M1_19490 PF00072 Response regulator receiver domain K01M1_19490 PF00196 Bacterial regulatory proteins, luxR family K01M1_19500 PF07730 Histidine kinase K01M1_19500 PF17200 Single Cache domain 2 K01M1_19510 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component K01M1_19530 PF03480 Bacterial extracellular solute-binding protein, family 7 K01M1_19560 PF00753 Metallo-beta-lactamase superfamily K01M1_19570 PF05951 Bacterial protein of unknown function (DUF882) K01M1_19580 PF01471 Putative peptidoglycan binding domain K01M1_19580 PF03734 L,D-transpeptidase catalytic domain K01M1_19630 PF00925 GTP cyclohydrolase II K01M1_19650 PF03918 Cytochrome C biogenesis protein K01M1_19660 PF08534 Redoxin K01M1_19670 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal K01M1_19670 PF01578 Cytochrome C assembly protein K01M1_19680 PF03916 Polysulphide reductase, NrfD K01M1_19690 PF13247 4Fe-4S dicluster domain K01M1_19710 PF02335 Cytochrome c552 K01M1_19740 PF00521 DNA gyrase/topoisomerase IV, subunit A K01M1_19740 PF03989 DNA gyrase C-terminal domain, beta-propeller K01M1_19760 PF02867 Ribonucleotide reductase, barrel domain K01M1_19760 PF03477 ATP cone domain K01M1_19760 PF00317 Ribonucleotide reductase, all-alpha domain K01M1_19770 PF00268 Ribonucleotide reductase, small chain K01M1_19790 PF00994 Probable molybdopterin binding domain K01M1_19820 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain K01M1_19830 PF16653 Saccharopine dehydrogenase C-terminal domain K01M1_19830 PF03435 Saccharopine dehydrogenase NADP binding domain K01M1_19840 PF00202 Aminotransferase class-III K01M1_19890 PF01066 CDP-alcohol phosphatidyltransferase K01M1_19900 PF08459 UvrC Helix-hairpin-helix N-terminal K01M1_19900 PF02151 UvrB/uvrC motif K01M1_19900 PF01541 GIY-YIG catalytic domain K01M1_19910 PF00072 Response regulator receiver domain K01M1_19910 PF00196 Bacterial regulatory proteins, luxR family K01M1_19920 PF03104 DNA polymerase family B, exonuclease domain K01M1_19920 PF00136 DNA polymerase family B K01M1_19940 PF08207 Elongation factor P (EF-P) KOW-like domain K01M1_19940 PF01132 Elongation factor P (EF-P) OB domain K01M1_19940 PF09285 Elongation factor P, C-terminal K01M1_19950 PF04269 Protein of unknown function, DUF440 K01M1_19960 PF00849 RNA pseudouridylate synthase K01M1_19960 PF01479 S4 domain K01M1_19980 PF01300 Telomere recombination K01M1_19990 PF02811 PHP domain K01M1_20000 PF08056 Tryptophan operon leader peptide K01M1_20010 PF04715 Anthranilate synthase component I, N terminal region K01M1_20010 PF00425 chorismate binding enzyme K01M1_20020 PF00117 Glutamine amidotransferase class-I K01M1_20030 PF00591 Glycosyl transferase family, a/b domain K01M1_20030 PF02885 Glycosyl transferase family, helical bundle domain K01M1_20040 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase K01M1_20040 PF00218 Indole-3-glycerol phosphate synthase K01M1_20050 PF00291 Pyridoxal-phosphate dependent enzyme K01M1_20060 PF00290 Tryptophan synthase alpha chain K01M1_20070 PF00027 Cyclic nucleotide-binding domain K01M1_20070 PF13545 Crp-like helix-turn-helix domain K01M1_20080 PF13193 AMP-binding enzyme C-terminal domain K01M1_20080 PF00501 AMP-binding enzyme K01M1_20090 PF00375 Sodium:dicarboxylate symporter family K01M1_20100 PF17327 Acyl homoserine lactone synthase K01M1_20110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K01M1_20110 PF00072 Response regulator receiver domain K01M1_20130 PF04279 Intracellular septation protein A K01M1_20140 PF03061 Thioesterase superfamily K01M1_20150 PF03795 YCII-related domain K01M1_20170 PF08267 Cobalamin-independent synthase, N-terminal domain K01M1_20170 PF01717 Cobalamin-independent synthase, Catalytic domain K01M1_20180 PF03466 LysR substrate binding domain K01M1_20180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K01M1_20210 PF08448 PAS fold K01M1_20210 PF00990 Diguanylate cyclase, GGDEF domain K01M1_20210 PF00563 EAL domain K01M1_20210 PF08447 PAS fold K01M1_20220 PF11842 Domain of unknown function (DUF3362) K01M1_20220 PF04055 Radical SAM superfamily K01M1_20220 PF08497 Radical SAM N-terminal K01M1_20260 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase K01M1_20270 PF00535 Glycosyl transferase family 2 K01M1_20280 PF00072 Response regulator receiver domain K01M1_20280 PF00486 Transcriptional regulatory protein, C terminal K01M1_20290 PF00672 HAMP domain K01M1_20290 PF00512 His Kinase A (phospho-acceptor) domain K01M1_20290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K01M1_20320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K01M1_20320 PF03466 LysR substrate binding domain K01M1_20330 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion K01M1_20330 PF00529 HlyD membrane-fusion protein of T1SS K01M1_20350 PF01717 Cobalamin-independent synthase, Catalytic domain K01M1_20350 PF08267 Cobalamin-independent synthase, N-terminal domain K01M1_20390 PF00005 ABC transporter K01M1_20390 PF02687 FtsX-like permease family K01M1_20390 PF12704 MacB-like periplasmic core domain K01M1_20400 PF02687 FtsX-like permease family K01M1_20400 PF00005 ABC transporter K01M1_20400 PF12704 MacB-like periplasmic core domain K01M1_20410 PF02687 FtsX-like permease family K01M1_20410 PF00005 ABC transporter K01M1_20410 PF12704 MacB-like periplasmic core domain K01M1_20430 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion K01M1_20460 PF01938 TRAM domain K01M1_20460 PF05958 tRNA (Uracil-5-)-methyltransferase K01M1_20480 PF00085 Thioredoxin K01M1_20490 PF13098 Thioredoxin-like domain K01M1_20490 PF02683 Cytochrome C biogenesis protein transmembrane region K01M1_20490 PF11412 Disulphide bond corrector protein DsbC K01M1_20510 PF00072 Response regulator receiver domain K01M1_20510 PF00196 Bacterial regulatory proteins, luxR family K01M1_20520 PF00512 His Kinase A (phospho-acceptor) domain K01M1_20520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K01M1_20530 PF13247 4Fe-4S dicluster domain K01M1_20540 PF03916 Polysulphide reductase, NrfD K01M1_20550 PF00384 Molybdopterin oxidoreductase K01M1_20550 PF01568 Molydopterin dinucleotide binding domain K01M1_20550 PF04879 Molybdopterin oxidoreductase Fe4S4 domain K01M1_20560 PF00034 Cytochrome c K01M1_20570 PF13442 Cytochrome C oxidase, cbb3-type, subunit III K01M1_20580 PF04403 Paraquat-inducible protein A K01M1_20590 PF02470 MlaD protein K01M1_20630 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle K01M1_20640 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family K01M1_20650 PF18073 Rubredoxin metal binding domain K01M1_20660 PF06305 Lipopolysaccharide assembly protein A domain K01M1_20670 PF00216 Bacterial DNA-binding protein K01M1_20680 PF00575 S1 RNA binding domain K01M1_20690 PF02224 Cytidylate kinase K01M1_20700 PF01343 Peptidase family S49 K01M1_20700 PF08496 Peptidase family S49 N-terminal K01M1_20710 PF00106 short chain dehydrogenase K01M1_20740 PF07733 Bacterial DNA polymerase III alpha NTPase domain K01M1_20740 PF01336 OB-fold nucleic acid binding domain K01M1_20740 PF02811 PHP domain K01M1_20740 PF14579 Helix-hairpin-helix motif K01M1_20740 PF17657 Bacterial DNA polymerase III alpha subunit finger domain K01M1_20750 PF01584 CheW-like domain K01M1_20750 PF00072 Response regulator receiver domain K01M1_20760 PF00480 ROK family K01M1_20770 PF02887 Pyruvate kinase, alpha/beta domain K01M1_20770 PF00224 Pyruvate kinase, barrel domain K01M1_20780 PF01734 Patatin-like phospholipase K01M1_20810 PF00209 Sodium:neurotransmitter symporter family K01M1_20840 PF00367 phosphotransferase system, EIIB K01M1_20840 PF02378 Phosphotransferase system, EIIC K01M1_20850 PF01026 TatD related DNase K01M1_20860 PF09115 DNA polymerase III, delta subunit, C terminal K01M1_20870 PF02223 Thymidylate kinase K01M1_20880 PF02618 YceG-like family K01M1_20890 PF01063 Amino-transferase class IV K01M1_20900 PF00109 Beta-ketoacyl synthase, N-terminal domain K01M1_20900 PF02801 Beta-ketoacyl synthase, C-terminal domain K01M1_20910 PF00550 Phosphopantetheine attachment site K01M1_20930 PF00698 Acyl transferase domain K01M1_20940 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III K01M1_20940 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal K01M1_20950 PF02504 Fatty acid synthesis protein K01M1_20960 PF01783 Ribosomal L32p protein family K01M1_20970 PF02620 Large ribosomal RNA subunit accumulation protein YceD K01M1_20980 PF02545 Maf-like protein K01M1_20990 PF01479 S4 domain K01M1_20990 PF00849 RNA pseudouridylate synthase K01M1_21000 PF12111 Polyribonucleotide phosphorylase C terminal K01M1_21000 PF10150 Ribonuclease E/G family K01M1_21000 PF00575 S1 RNA binding domain K01M1_21010 PF00916 Sulfate permease family K01M1_21010 PF01740 STAS domain K01M1_21020 PF01451 Low molecular weight phosphotyrosine protein phosphatase K01M1_21030 PF12557 Cob(I)alamin adenosyltransferase N terminal K01M1_21030 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP K01M1_21050 PF00485 Phosphoribulokinase / Uridine kinase family K01M1_21060 PF10609 NUBPL iron-transfer P-loop NTPase K01M1_21070 PF01588 Putative tRNA binding domain K01M1_21070 PF09334 tRNA synthetases class I (M) K01M1_21110 PF00392 Bacterial regulatory proteins, gntR family K01M1_21110 PF07840 FadR C-terminal domain K01M1_21120 PF06450 Bacterial Na+/H+ antiporter B (NhaB) K01M1_21130 PF02600 Disulfide bond formation protein DsbB K01M1_21140 PF03695 Uncharacterised protein family (UPF0149) K01M1_21140 PF02810 SEC-C motif K01M1_21150 PF01207 Dihydrouridine synthase (Dus) K01M1_21160 PF17158 Membrane-associated sensor, integral membrane domain K01M1_21160 PF00990 Diguanylate cyclase, GGDEF domain K01M1_21170 PF00128 Alpha amylase, catalytic domain K01M1_21170 PF02903 Alpha amylase, N-terminal ig-like domain K01M1_21180 PF00005 ABC transporter K01M1_21190 PF02653 Branched-chain amino acid transport system / permease component K01M1_21210 PF04217 Protein of unknown function, DUF412 K01M1_21220 PF00871 Acetokinase family K01M1_21230 PF01515 Phosphate acetyl/butaryl transferase K01M1_21230 PF07085 DRTGG domain K01M1_21250 PF13409 Glutathione S-transferase, N-terminal domain K01M1_21260 PF00005 ABC transporter K01M1_21260 PF08352 Oligopeptide/dipeptide transporter, C-terminal region K01M1_21270 PF08352 Oligopeptide/dipeptide transporter, C-terminal region K01M1_21270 PF00005 ABC transporter K01M1_21280 PF12911 N-terminal TM domain of oligopeptide transport permease C K01M1_21280 PF00528 Binding-protein-dependent transport system inner membrane component K01M1_21290 PF00528 Binding-protein-dependent transport system inner membrane component K01M1_21300 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle K01M1_21310 PF02391 MoaE protein K01M1_21320 PF02597 ThiS family K01M1_21330 PF01967 MoaC family K01M1_21340 PF00994 Probable molybdopterin binding domain K01M1_21350 PF04055 Radical SAM superfamily K01M1_21350 PF06463 Molybdenum Cofactor Synthesis C K01M1_21360 PF01933 Uncharacterised protein family UPF0052 K01M1_21370 PF01627 Hpt domain K01M1_21380 PF02954 Bacterial regulatory protein, Fis family K01M1_21380 PF00072 Response regulator receiver domain K01M1_21380 PF00158 Sigma-54 interaction domain K01M1_21390 PF17757 UvrB interaction domain K01M1_21390 PF12344 Ultra-violet resistance protein B K01M1_21390 PF00271 Helicase conserved C-terminal domain K01M1_21390 PF02151 UvrB/uvrC motif K01M1_21390 PF04851 Type III restriction enzyme, res subunit K01M1_21410 PF01228 Glycine radical K01M1_21410 PF02901 Pyruvate formate lyase-like K01M1_21420 PF02508 Rnf-Nqr subunit, membrane protein K01M1_21430 PF04060 Putative Fe-S cluster K01M1_21440 PF10531 SLBB domain K01M1_21440 PF12838 4Fe-4S dicluster domain K01M1_21440 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit K01M1_21440 PF13375 RnfC Barrel sandwich hybrid domain K01M1_21450 PF03116 NQR2, RnfD, RnfE family K01M1_21460 PF04205 FMN-binding domain K01M1_21470 PF02508 Rnf-Nqr subunit, membrane protein K01M1_21480 PF10576 Iron-sulfur binding domain of endonuclease III K01M1_21480 PF00633 Helix-hairpin-helix motif K01M1_21480 PF00730 HhH-GPD superfamily base excision DNA repair protein K01M1_21490 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K01M1_21500 PF10952 Protein of unknown function (DUF2753) K01M1_21510 PF00691 OmpA family K01M1_21510 PF18393 MotY N-terminal domain K01M1_21520 PF00929 Exonuclease K01M1_21530 PF03553 Na+/H+ antiporter family K01M1_21530 PF13726 Na+-H+ antiporter family K01M1_21570 PF00462 Glutaredoxin K01M1_21580 PF02777 Iron/manganese superoxide dismutases, C-terminal domain K01M1_21580 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain K01M1_21610 PF00171 Aldehyde dehydrogenase family K01M1_21610 PF00465 Iron-containing alcohol dehydrogenase K01M1_21620 PF01914 MarC family integral membrane protein K01M1_21630 PF00027 Cyclic nucleotide-binding domain K01M1_21630 PF00520 Ion transport protein K01M1_21640 PF01118 Semialdehyde dehydrogenase, NAD binding domain K01M1_21640 PF02774 Semialdehyde dehydrogenase, dimerisation domain K01M1_21650 PF03553 Na+/H+ antiporter family K01M1_21680 PF04245 37-kD nucleoid-associated bacterial protein K01M1_21690 PF07208 Protein of unknown function (DUF1414) K01M1_21700 PF00884 Sulfatase K01M1_21700 PF11893 Domain of unknown function (DUF3413) K01M1_21720 PF00850 Histone deacetylase domain K01M1_21730 PF00106 short chain dehydrogenase K01M1_21760 PF01751 Toprim domain K01M1_21760 PF01131 DNA topoisomerase K01M1_21770 PF00881 Nitroreductase family K01M1_21790 PF00724 NADH:flavin oxidoreductase / NADH oxidase family K01M1_21790 PF07992 Pyridine nucleotide-disulphide oxidoreductase K01M1_21800 PF01343 Peptidase family S49 K01M1_21810 PF00710 Asparaginase, N-terminal K01M1_21810 PF17763 Glutaminase/Asparaginase C-terminal domain K01M1_21820 PF07023 Protein of unknown function (DUF1315) K01M1_21840 PF01641 SelR domain K01M1_21850 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain K01M1_21850 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain K01M1_21860 PF01263 Aldose 1-epimerase K01M1_21870 PF13426 PAS domain K01M1_21870 PF08447 PAS fold K01M1_21870 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K01M1_21880 PF13847 Methyltransferase domain K01M1_21910 PF00245 Alkaline phosphatase K01M1_21930 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K01M1_21940 PF03992 Antibiotic biosynthesis monooxygenase K01M1_21950 PF05552 Conserved TM helix K01M1_21950 PF00924 Mechanosensitive ion channel K01M1_21960 PF03692 Putative zinc- or iron-chelating domain K01M1_21970 PF04226 Transglycosylase associated protein K01M1_21980 PF03692 Putative zinc- or iron-chelating domain K01M1_21990 PF00230 Major intrinsic protein K01M1_22000 PF02132 RecR protein K01M1_22000 PF13662 Toprim domain K01M1_22010 PF02575 YbaB/EbfC DNA-binding family K01M1_22020 PF12170 DNA polymerase III tau subunit V interacting with alpha K01M1_22020 PF12169 DNA polymerase III subunits gamma and tau domain III K01M1_22020 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding K01M1_22030 PF00156 Phosphoribosyl transferase domain K01M1_22040 PF04304 Protein of unknown function (DUF454) K01M1_22060 PF00072 Response regulator receiver domain K01M1_22070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K01M1_22070 PF03466 LysR substrate binding domain K01M1_22080 PF00156 Phosphoribosyl transferase domain K01M1_22090 PF02674 Colicin V production protein K01M1_22100 PF05036 Sporulation related domain K01M1_22110 PF02875 Mur ligase family, glutamate ligase domain K01M1_22110 PF08245 Mur ligase middle domain K01M1_22120 PF17848 Acetyl-coA carboxylase zinc finger domain K01M1_22120 PF01039 Carboxyl transferase domain K01M1_22130 PF01416 tRNA pseudouridine synthase K01M1_22150 PF02774 Semialdehyde dehydrogenase, dimerisation domain K01M1_22150 PF01118 Semialdehyde dehydrogenase, NAD binding domain K01M1_22160 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain K01M1_22160 PF11890 Domain of unknown function (DUF3410) K01M1_22160 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K01M1_22170 PF02801 Beta-ketoacyl synthase, C-terminal domain K01M1_22170 PF00109 Beta-ketoacyl synthase, N-terminal domain K01M1_22180 PF01266 FAD dependent oxidoreductase K01M1_22180 PF05430 S-adenosyl-L-methionine-dependent methyltransferase K01M1_22190 PF03358 NADPH-dependent FMN reductase K01M1_22200 PF08891 YfcL protein K01M1_22210 PF04315 Elongation factor P hydroxylase K01M1_22220 PF03458 UPF0126 domain K01M1_22230 PF01264 Chorismate synthase K01M1_22240 PF05175 Methyltransferase small domain K01M1_22250 PF01713 Smr domain K01M1_22260 PF00300 Histidine phosphatase superfamily (branch 1) K01M1_22270 PF16187 Middle or third domain of peptidase_M16 K01M1_22270 PF05193 Peptidase M16 inactive domain K01M1_22270 PF00675 Insulinase (Peptidase family M16) K01M1_22290 PF00378 Enoyl-CoA hydratase/isomerase K01M1_22290 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain K01M1_22290 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K01M1_22300 PF00108 Thiolase, N-terminal domain K01M1_22300 PF02803 Thiolase, C-terminal domain K01M1_22320 PF08281 Sigma-70, region 4 K01M1_22320 PF04542 Sigma-70 region 2 K01M1_22340 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) K01M1_22350 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) K01M1_22360 PF04333 MlaA lipoprotein K01M1_22370 PF03918 Cytochrome C biogenesis protein K01M1_22380 PF03918 Cytochrome C biogenesis protein K01M1_22390 PF08534 Redoxin K01M1_22400 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal K01M1_22400 PF01578 Cytochrome C assembly protein K01M1_22410 PF03100 CcmE K01M1_22420 PF04995 Heme exporter protein D (CcmD) K01M1_22430 PF01578 Cytochrome C assembly protein K01M1_22440 PF03379 CcmB protein K01M1_22450 PF00005 ABC transporter K01M1_22470 PF01584 CheW-like domain K01M1_22490 PF13614 AAA domain K01M1_22500 PF01339 CheB methylesterase K01M1_22500 PF00072 Response regulator receiver domain K01M1_22510 PF07194 P2 response regulator binding domain K01M1_22510 PF01584 CheW-like domain K01M1_22510 PF02895 Signal transducing histidine kinase, homodimeric domain K01M1_22510 PF01627 Hpt domain K01M1_22510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K01M1_22520 PF04344 Chemotaxis phosphatase, CheZ K01M1_22530 PF00072 Response regulator receiver domain K01M1_22540 PF04545 Sigma-70, region 4 K01M1_22540 PF04539 Sigma-70 region 3 K01M1_22540 PF04542 Sigma-70 region 2 K01M1_22550 PF10609 NUBPL iron-transfer P-loop NTPase K01M1_22560 PF00448 SRP54-type protein, GTPase domain K01M1_22570 PF00771 FHIPEP family K01M1_22580 PF01312 FlhB HrpN YscU SpaS Family K01M1_22590 PF01311 Bacterial export proteins, family 1 K01M1_22600 PF01313 Bacterial export proteins, family 3 K01M1_22610 PF00813 FliP family K01M1_22620 PF04347 Flagellar biosynthesis protein, FliO K01M1_22630 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term K01M1_22640 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term K01M1_22640 PF02154 Flagellar motor switch protein FliM K01M1_22690 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain K01M1_22690 PF18269 T3SS EscN ATPase C-terminal domain K01M1_22710 PF14842 FliG N-terminal domain K01M1_22710 PF14841 FliG middle domain K01M1_22710 PF01706 FliG C-terminal domain K01M1_22720 PF08345 Flagellar M-ring protein C-terminal K01M1_22720 PF01514 Secretory protein of YscJ/FliF family K01M1_22730 PF02049 Flagellar hook-basal body complex protein FliE K01M1_22740 PF00072 Response regulator receiver domain K01M1_22740 PF00158 Sigma-54 interaction domain K01M1_22740 PF02954 Bacterial regulatory protein, Fis family K01M1_22750 PF00512 His Kinase A (phospho-acceptor) domain K01M1_22750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K01M1_22760 PF00158 Sigma-54 interaction domain K01M1_22760 PF00072 Response regulator receiver domain K01M1_22760 PF02954 Bacterial regulatory protein, Fis family K01M1_22770 PF02561 Flagellar protein FliS K01M1_22790 PF07196 Flagellin hook IN motif K01M1_22790 PF07195 Flagellar hook-associated protein 2 C-terminus K01M1_22790 PF02465 Flagellar hook-associated protein 2 N-terminus K01M1_22800 PF03646 FlaG protein K01M1_22810 PF07196 Flagellin hook IN motif K01M1_22810 PF00669 Bacterial flagellin N-terminal helical region K01M1_22810 PF00700 Bacterial flagellin C-terminal helical region K01M1_22820 PF00669 Bacterial flagellin N-terminal helical region K01M1_22820 PF07196 Flagellin hook IN motif K01M1_22820 PF00700 Bacterial flagellin C-terminal helical region K01M1_22830 PF00700 Bacterial flagellin C-terminal helical region K01M1_22830 PF07196 Flagellin hook IN motif K01M1_22830 PF00669 Bacterial flagellin N-terminal helical region K01M1_22840 PF04261 Dyp-type peroxidase family K01M1_22850 PF11143 Protein of unknown function (DUF2919) K01M1_22890 PF03960 ArsC family K01M1_22900 PF07687 Peptidase dimerisation domain K01M1_22900 PF01546 Peptidase family M20/M25/M40 K01M1_22940 PF00701 Dihydrodipicolinate synthetase family K01M1_22960 PF00578 AhpC/TSA family K01M1_23010 PF00578 AhpC/TSA family K01M1_23030 PF00890 FAD binding domain K01M1_23030 PF02910 Fumarate reductase flavoprotein C-term K01M1_23040 PF00005 ABC transporter K01M1_23040 PF03412 Peptidase C39 family K01M1_23040 PF00664 ABC transporter transmembrane region K01M1_23050 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion K01M1_23050 PF00529 HlyD membrane-fusion protein of T1SS K01M1_23090 PF00535 Glycosyl transferase family 2 K01M1_23140 PF02954 Bacterial regulatory protein, Fis family K01M1_23160 PF13361 UvrD-like helicase C-terminal domain K01M1_23160 PF00580 UvrD/REP helicase N-terminal domain K01M1_23190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K01M1_23190 PF00512 His Kinase A (phospho-acceptor) domain K01M1_23190 PF00072 Response regulator receiver domain K01M1_23190 PF09308 LuxQ, periplasmic K01M1_23200 PF01527 Transposase K01M1_23230 PF00313 'Cold-shock' DNA-binding domain K01M1_23280 PF00313 'Cold-shock' DNA-binding domain K01M1_23290 PF00589 Phage integrase family K01M1_23290 PF02899 Phage integrase, N-terminal SAM-like domain K01M1_23300 PF12221 Bacterial membrane protein N terminal K01M1_23300 PF01145 SPFH domain / Band 7 family K01M1_23320 PF06965 Na+/H+ antiporter 1 K01M1_23330 PF00694 Aconitase C-terminal domain K01M1_23330 PF00330 Aconitase family (aconitate hydratase) K01M1_23340 PF00313 'Cold-shock' DNA-binding domain K01M1_23370 PF00578 AhpC/TSA family K01M1_23380 PF01594 AI-2E family transporter K01M1_23400 PF13181 Tetratricopeptide repeat K01M1_23400 PF01435 Peptidase family M48 K01M1_23410 PF03960 ArsC family K01M1_23420 PF03358 NADPH-dependent FMN reductase K01M1_23450 PF00860 Permease family K01M1_23470 PF00586 AIR synthase related protein, N-terminal domain K01M1_23470 PF02769 AIR synthase related protein, C-terminal domain K01M1_23480 PF00551 Formyl transferase K01M1_23500 PF13230 Glutamine amidotransferases class-II K01M1_23510 PF13580 SIS domain K01M1_23520 PF02770 Acyl-CoA dehydrogenase, middle domain K01M1_23520 PF00441 Acyl-CoA dehydrogenase, C-terminal domain K01M1_23520 PF09317 Domain of unknown function (DUF1974) K01M1_23520 PF02771 Acyl-CoA dehydrogenase, N-terminal domain K01M1_23530 PF01740 STAS domain K01M1_23530 PF00916 Sulfate permease family K01M1_23580 PF00929 Exonuclease K01M1_23590 PF00075 RNase H K01M1_23600 PF08241 Methyltransferase domain K01M1_23610 PF00753 Metallo-beta-lactamase superfamily K01M1_23610 PF16123 Hydroxyacylglutathione hydrolase C-terminus K01M1_23620 PF01464 Transglycosylase SLT domain K01M1_23620 PF01476 LysM domain K01M1_23640 PF03372 Endonuclease/Exonuclease/phosphatase family K01M1_23650 PF00543 Nitrogen regulatory protein P-II K01M1_23660 PF00034 Cytochrome c K01M1_23670 PF09179 TilS substrate binding domain K01M1_23670 PF01171 PP-loop family K01M1_23670 PF11734 TilS substrate C-terminal domain K01M1_23680 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit K01M1_23690 PF02811 PHP domain K01M1_23690 PF01336 OB-fold nucleic acid binding domain K01M1_23690 PF07733 Bacterial DNA polymerase III alpha NTPase domain K01M1_23690 PF17657 Bacterial DNA polymerase III alpha subunit finger domain K01M1_23690 PF14579 Helix-hairpin-helix motif K01M1_23700 PF01351 Ribonuclease HII K01M1_23710 PF02684 Lipid-A-disaccharide synthetase K01M1_23720 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 K01M1_23720 PF00132 Bacterial transferase hexapeptide (six repeats) K01M1_23730 PF07977 FabA-like domain K01M1_23740 PF00132 Bacterial transferase hexapeptide (six repeats) K01M1_23740 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD K01M1_23750 PF03938 Outer membrane protein (OmpH-like) K01M1_23760 PF07244 Surface antigen variable number repeat K01M1_23760 PF01103 Surface antigen K01M1_23770 PF17820 PDZ domain K01M1_23770 PF02163 Peptidase family M50 K01M1_23780 PF13288 DXP reductoisomerase C-terminal domain K01M1_23780 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain K01M1_23780 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase K01M1_23800 PF01255 Putative undecaprenyl diphosphate synthase K01M1_23810 PF01765 Ribosome recycling factor K01M1_23820 PF00696 Amino acid kinase family K01M1_23830 PF00889 Elongation factor TS K01M1_23840 PF00318 Ribosomal protein S2 K01M1_23850 PF00557 Metallopeptidase family M24 K01M1_23860 PF01842 ACT domain K01M1_23860 PF01966 HD domain K01M1_23860 PF08335 GlnD PII-uridylyltransferase K01M1_23860 PF01909 Nucleotidyltransferase domain K01M1_23870 PF11944 Protein of unknown function (DUF3461) K01M1_23880 PF00849 RNA pseudouridylate synthase K01M1_23890 PF04287 tRNA pseudouridine synthase C K01M1_23940 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 K01M1_23950 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III K01M1_23950 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal K01M1_23960 PF01370 NAD dependent epimerase/dehydratase family K01M1_24010 PF03806 AbgT putative transporter family K01M1_24020 PF01197 Ribosomal protein L31 K01M1_24030 PF01980 tRNA-methyltransferase O K01M1_24030 PF18389 TrmO C-terminal domain K01M1_24040 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) K01M1_24040 PF04073 Aminoacyl-tRNA editing domain K01M1_24040 PF03129 Anticodon binding domain K01M1_24060 PF06786 Uncharacterised protein family (UPF0253) K01M1_24080 PF00209 Sodium:neurotransmitter symporter family K01M1_24090 PF00704 Glycosyl hydrolases family 18 K01M1_24090 PF06483 Chitinase C K01M1_24110 PF01272 Transcription elongation factor, GreA/GreB, C-term K01M1_24110 PF03449 Transcription elongation factor, N-terminal K01M1_24120 PF16124 RecQ zinc-binding K01M1_24120 PF00270 DEAD/DEAH box helicase K01M1_24120 PF00271 Helicase conserved C-terminal domain K01M1_24120 PF09382 RQC domain K01M1_24120 PF00570 HRDC domain K01M1_24170 PF11799 impB/mucB/samB family C-terminal domain K01M1_24170 PF11798 IMS family HHH motif K01M1_24170 PF00817 impB/mucB/samB family K01M1_24330 PF00916 Sulfate permease family K01M1_24330 PF01740 STAS domain K01M1_24340 PF00582 Universal stress protein family K01M1_24350 PF00117 Glutamine amidotransferase class-I K01M1_24350 PF13673 Acetyltransferase (GNAT) domain K01M1_24350 PF03352 Methyladenine glycosylase K01M1_24350 PF13302 Acetyltransferase (GNAT) domain K01M1_24350 PF00958 GMP synthase C terminal domain K01M1_24450 PF00817 impB/mucB/samB family K01M1_24450 PF11799 impB/mucB/samB family C-terminal domain K01M1_24450 PF11798 IMS family HHH motif K01M1_24470 PF00072 Response regulator receiver domain K01M1_24470 PF00990 Diguanylate cyclase, GGDEF domain K01M1_24490 PF02424 ApbE family K01M1_24500 PF00175 Oxidoreductase NAD-binding domain K01M1_24500 PF00111 2Fe-2S iron-sulfur cluster binding domain K01M1_24500 PF00970 Oxidoreductase FAD-binding domain K01M1_24510 PF02508 Rnf-Nqr subunit, membrane protein K01M1_24520 PF02508 Rnf-Nqr subunit, membrane protein K01M1_24530 PF04205 FMN-binding domain K01M1_24540 PF03116 NQR2, RnfD, RnfE family K01M1_24550 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) K01M1_24550 PF11973 NQRA C-terminal domain K01M1_24560 PF01722 BolA-like protein K01M1_24570 PF05175 Methyltransferase small domain K01M1_24580 PF08139 Prokaryotic membrane lipoprotein lipid attachment site K01M1_24580 PF03923 Uncharacterized lipoprotein K01M1_24590 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD K01M1_24600 PF07690 Major Facilitator Superfamily K01M1_24620 PF04542 Sigma-70 region 2 K01M1_24620 PF04545 Sigma-70, region 4 K01M1_24650 PF03502 Nucleoside-specific channel-forming protein, Tsx K01M1_24660 PF02558 Ketopantoate reductase PanE/ApbA K01M1_24660 PF08546 Ketopantoate reductase PanE/ApbA C terminal K01M1_24670 PF01965 DJ-1/PfpI family K01M1_24680 PF00266 Aminotransferase class-V K01M1_24690 PF00990 Diguanylate cyclase, GGDEF domain K01M1_24690 PF17158 Membrane-associated sensor, integral membrane domain K01M1_24700 PF02657 Fe-S metabolism associated domain K01M1_24710 PF00899 ThiF family K01M1_24720 PF03562 MltA specific insert domain K01M1_24720 PF06725 3D domain K01M1_24740 PF00696 Amino acid kinase family K01M1_24740 PF00583 Acetyltransferase (GNAT) family K01M1_24760 PF13538 UvrD-like helicase C-terminal domain K01M1_24770 PF13361 UvrD-like helicase C-terminal domain K01M1_24770 PF00580 UvrD/REP helicase N-terminal domain K01M1_24770 PF12705 PD-(D/E)XK nuclease superfamily K01M1_24780 PF17946 RecC C-terminal domain K01M1_24790 PF08676 MutL C terminal dimerisation domain K01M1_24790 PF01119 DNA mismatch repair protein, C-terminal domain K01M1_24850 PF00665 Integrase core domain K01M1_24860 PF01527 Transposase K01M1_24880 PF00145 C-5 cytosine-specific DNA methylase K01M1_24890 PF00145 C-5 cytosine-specific DNA methylase K01M1_24900 PF11893 Domain of unknown function (DUF3413) K01M1_24900 PF00884 Sulfatase K01M1_24920 PF03466 LysR substrate binding domain K01M1_24920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K01M1_24930 PF07130 YebG protein K01M1_24960 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle K01M1_24960 PF14602 Hexapeptide repeat of succinyl-transferase K01M1_24970 PF03009 Glycerophosphoryl diester phosphodiesterase family K01M1_24980 PF07690 Major Facilitator Superfamily K01M1_24990 PF00230 Major intrinsic protein K01M1_25000 PF02782 FGGY family of carbohydrate kinases, C-terminal domain K01M1_25000 PF00370 FGGY family of carbohydrate kinases, N-terminal domain K01M1_25010 PF00455 DeoR C terminal sensor domain K01M1_25010 PF08220 DeoR-like helix-turn-helix domain K01M1_25020 PF01266 FAD dependent oxidoreductase K01M1_25020 PF16901 C-terminal domain of alpha-glycerophosphate oxidase K01M1_25030 PF01544 CorA-like Mg2+ transporter protein K01M1_25070 PF00356 Bacterial regulatory proteins, lacI family K01M1_25080 PF03466 LysR substrate binding domain K01M1_25080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K01M1_25100 PF00196 Bacterial regulatory proteins, luxR family K01M1_25160 PF00501 AMP-binding enzyme K01M1_25180 PF03466 LysR substrate binding domain K01M1_25180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K01M1_25190 PF03144 Elongation factor Tu domain 2 K01M1_25190 PF00009 Elongation factor Tu GTP binding domain K01M1_25190 PF03764 Elongation factor G, domain IV K01M1_25190 PF00679 Elongation factor G C-terminus K01M1_25190 PF14492 Elongation Factor G, domain II K01M1_25200 PF18073 Rubredoxin metal binding domain K01M1_25220 PF18429 Domain of unknown function (DUF5609) K01M1_25240 PF01048 Phosphorylase superfamily K01M1_25250 PF01676 Metalloenzyme superfamily K01M1_25260 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain K01M1_25260 PF02885 Glycosyl transferase family, helical bundle domain K01M1_25260 PF00591 Glycosyl transferase family, a/b domain K01M1_25270 PF01791 DeoC/LacD family aldolase K01M1_25280 PF01773 Na+ dependent nucleoside transporter N-terminus K01M1_25280 PF07670 Nucleoside recognition K01M1_25280 PF07662 Na+ dependent nucleoside transporter C-terminus K01M1_25290 PF01026 TatD related DNase K01M1_25310 PF00009 Elongation factor Tu GTP binding domain K01M1_25310 PF03144 Elongation factor Tu domain 2 K01M1_25310 PF16658 Class II release factor RF3, C-terminal domain K01M1_25350 PF13508 Acetyltransferase (GNAT) domain K01M1_25370 PF03707 Bacterial signalling protein N terminal repeat K01M1_25370 PF00990 Diguanylate cyclase, GGDEF domain K01M1_25370 PF00563 EAL domain K01M1_25400 PF01554 MatE K01M1_25420 PF07719 Tetratricopeptide repeat K01M1_25420 PF13181 Tetratricopeptide repeat K01M1_25430 PF00575 S1 RNA binding domain K01M1_25430 PF01138 3' exoribonuclease family, domain 1 K01M1_25430 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain K01M1_25430 PF00013 KH domain K01M1_25430 PF03725 3' exoribonuclease family, domain 2 K01M1_25440 PF00312 Ribosomal protein S15 K01M1_25450 PF01509 TruB family pseudouridylate synthase (N terminal domain) K01M1_25450 PF16198 tRNA pseudouridylate synthase B C-terminal domain K01M1_25450 PF09157 Pseudouridine synthase II TruB, C-terminal K01M1_25460 PF02033 Ribosome-binding factor A K01M1_25470 PF00009 Elongation factor Tu GTP binding domain K01M1_25470 PF11987 Translation-initiation factor 2 K01M1_25470 PF08364 Bacterial translation initiation factor IF-2 associated region K01M1_25470 PF04760 Translation initiation factor IF-2, N-terminal region K01M1_25480 PF13184 NusA-like KH domain K01M1_25480 PF00575 S1 RNA binding domain K01M1_25480 PF08529 NusA N-terminal domain K01M1_25490 PF02576 RimP N-terminal domain K01M1_25490 PF17384 RimP C-terminal SH3 domain K01M1_25520 PF03840 Preprotein translocase SecG subunit K01M1_25530 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I K01M1_25530 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain K01M1_25530 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III K01M1_25530 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II K01M1_25540 PF00809 Pterin binding enzyme K01M1_25550 PF06480 FtsH Extracellular K01M1_25550 PF01434 Peptidase family M41 K01M1_25550 PF17862 AAA+ lid domain K01M1_25550 PF00004 ATPase family associated with various cellular activities (AAA) K01M1_25560 PF01728 FtsJ-like methyltransferase K01M1_25570 PF01985 CRS1 / YhbY (CRM) domain K01M1_25580 PF01272 Transcription elongation factor, GreA/GreB, C-term K01M1_25580 PF03449 Transcription elongation factor, N-terminal K01M1_25590 PF13609 Gram-negative porin K01M1_25600 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family K01M1_25620 PF00579 tRNA synthetases class I (W and Y) K01M1_25630 PF08525 Opacity-associated protein A N-terminal motif K01M1_25630 PF01476 LysM domain K01M1_25630 PF01551 Peptidase family M23 K01M1_25640 PF00873 AcrB/AcrD/AcrF family K01M1_25660 PF01521 Iron-sulphur cluster biosynthesis K01M1_25670 PF00202 Aminotransferase class-III K01M1_25680 PF01594 AI-2E family transporter K01M1_25690 PF05175 Methyltransferase small domain K01M1_25690 PF08468 Methyltransferase small domain N-terminal K01M1_25700 PF09308 LuxQ, periplasmic K01M1_25700 PF00072 Response regulator receiver domain K01M1_25700 PF00512 His Kinase A (phospho-acceptor) domain K01M1_25700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K01M1_25710 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle K01M1_25720 PF00528 Binding-protein-dependent transport system inner membrane component K01M1_25730 PF00528 Binding-protein-dependent transport system inner membrane component K01M1_25730 PF12911 N-terminal TM domain of oligopeptide transport permease C K01M1_25740 PF00005 ABC transporter K01M1_25740 PF08352 Oligopeptide/dipeptide transporter, C-terminal region K01M1_25750 PF00005 ABC transporter K01M1_25750 PF08352 Oligopeptide/dipeptide transporter, C-terminal region K01M1_25770 PF01869 BadF/BadG/BcrA/BcrD ATPase family K01M1_25780 PF00728 Glycosyl hydrolase family 20, catalytic domain K01M1_25780 PF02838 Glycosyl hydrolase family 20, domain 2 K01M1_25790 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain K01M1_25790 PF06165 Glycosyltransferase family 36 K01M1_25800 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain K01M1_25800 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II K01M1_25800 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I K01M1_25800 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III K01M1_25810 PF08402 TOBE domain K01M1_25810 PF00005 ABC transporter K01M1_25830 PF13416 Bacterial extracellular solute-binding protein K01M1_25840 PF00909 Ammonium Transporter Family K01M1_25850 PF00543 Nitrogen regulatory protein P-II K01M1_25860 PF06062 Uncharacterised protein family (UPF0231) K01M1_25870 PF06434 Aconitate hydratase 2 N-terminus K01M1_25870 PF11791 Aconitate B N-terminal domain K01M1_25870 PF00330 Aconitase family (aconitate hydratase) K01M1_25880 PF01734 Patatin-like phospholipase K01M1_25890 PF00912 Transglycosylase K01M1_25890 PF00905 Penicillin binding protein transpeptidase domain K01M1_25890 PF14814 Bifunctional transglycosylase second domain K01M1_25900 PF08482 ATP-dependent helicase C-terminal K01M1_25900 PF00271 Helicase conserved C-terminal domain K01M1_25900 PF04408 Helicase associated domain (HA2) K01M1_25900 PF00270 DEAD/DEAH box helicase K01M1_25910 PF03749 Sugar fermentation stimulation protein RE domain K01M1_25910 PF17746 SfsA N-terminal OB domain K01M1_25920 PF01258 Prokaryotic dksA/traR C4-type zinc finger K01M1_25930 PF00749 tRNA synthetases class I (E and Q), catalytic domain K01M1_25940 PF01743 Poly A polymerase head domain K01M1_25940 PF12627 Probable RNA and SrmB- binding site of polymerase A K01M1_25940 PF12626 Polymerase A arginine-rich C-terminus K01M1_25950 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) K01M1_25960 PF02548 Ketopantoate hydroxymethyltransferase K01M1_25970 PF02569 Pantoate-beta-alanine ligase K01M1_25980 PF03279 Bacterial lipid A biosynthesis acyltransferase K01M1_25990 PF01061 ABC-2 type transporter K01M1_26000 PF00005 ABC transporter K01M1_26010 PF01740 STAS domain K01M1_26010 PF00916 Sulfate permease family K01M1_26020 PF00484 Carbonic anhydrase K01M1_26030 PF00156 Phosphoribosyl transferase domain K01M1_26040 PF00440 Bacterial regulatory proteins, tetR family K01M1_26050 PF07992 Pyridine nucleotide-disulphide oxidoreductase K01M1_26050 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K01M1_26060 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) K01M1_26060 PF02817 e3 binding domain K01M1_26060 PF00364 Biotin-requiring enzyme K01M1_26070 PF17831 Pyruvate dehydrogenase E1 component middle domain K01M1_26070 PF00456 Transketolase, thiamine diphosphate binding domain K01M1_26080 PF07729 FCD domain K01M1_26080 PF00392 Bacterial regulatory proteins, gntR family K01M1_26090 PF01510 N-acetylmuramoyl-L-alanine amidase K01M1_26100 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain K01M1_26100 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain K01M1_26110 PF00114 Pilin (bacterial filament) K01M1_26110 PF07963 Prokaryotic N-terminal methylation motif K01M1_26120 PF00437 Type II/IV secretion system protein K01M1_26120 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain K01M1_26130 PF00482 Type II secretion system (T2SS), protein F K01M1_26140 PF01478 Type IV leader peptidase family K01M1_26140 PF06750 Bacterial Peptidase A24 N-terminal domain K01M1_26150 PF01121 Dephospho-CoA kinase K01M1_26160 PF07072 Cell division protein K01M1_26170 PF03884 DNA gyrase inhibitor YacG K01M1_26180 PF01245 Ribosomal protein L19 K01M1_26190 PF01746 tRNA (Guanine-1)-methyltransferase K01M1_26200 PF01782 RimM N-terminal domain K01M1_26200 PF05239 PRC-barrel domain K01M1_26210 PF00886 Ribosomal protein S16 K01M1_26220 PF02978 Signal peptide binding domain K01M1_26220 PF00448 SRP54-type protein, GTPase domain K01M1_26220 PF02881 SRP54-type protein, helical bundle domain K01M1_26230 PF01578 Cytochrome C assembly protein K01M1_26240 PF01595 Cyclin M transmembrane N-terminal domain K01M1_26240 PF03471 Transporter associated domain K01M1_26240 PF00571 CBS domain K01M1_26250 PF02664 S-Ribosylhomocysteinase (LuxS) K01M1_26270 PF04262 Glutamate-cysteine ligase K01M1_26280 PF00675 Insulinase (Peptidase family M16) K01M1_26280 PF05193 Peptidase M16 inactive domain K01M1_26290 PF09335 SNARE associated Golgi protein K01M1_26310 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit K01M1_26320 PF00364 Biotin-requiring enzyme K01M1_26320 PF02436 Conserved carboxylase domain K01M1_26320 PF00682 HMGL-like K01M1_26330 PF04277 Oxaloacetate decarboxylase, gamma chain K01M1_26440 PF02599 Global regulator protein family K01M1_26450 PF01842 ACT domain K01M1_26450 PF13840 ACT domain K01M1_26450 PF00696 Amino acid kinase family K01M1_26460 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain K01M1_26460 PF01411 tRNA synthetases class II (A) K01M1_26460 PF02272 DHHA1 domain K01M1_26470 PF02631 RecX family K01M1_26480 PF00154 recA bacterial DNA recombination protein K01M1_26490 PF02464 Competence-damaged protein K01M1_26500 PF00488 MutS domain V K01M1_26500 PF05190 MutS family domain IV K01M1_26500 PF05188 MutS domain II K01M1_26500 PF01624 MutS domain I K01M1_26500 PF05192 MutS domain III K01M1_26510 PF04542 Sigma-70 region 2 K01M1_26510 PF00140 Sigma-70 factor, region 1.2 K01M1_26510 PF04545 Sigma-70, region 4 K01M1_26510 PF04539 Sigma-70 region 3 K01M1_26520 PF01476 LysM domain K01M1_26520 PF01551 Peptidase family M23 K01M1_26540 PF01975 Survival protein SurE K01M1_26550 PF01142 tRNA pseudouridine synthase D (TruD) K01M1_26560 PF02542 YgbB family K01M1_26570 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K01M1_26580 PF04977 Septum formation initiator K01M1_26590 PF03952 Enolase, N-terminal domain K01M1_26590 PF00113 Enolase, C-terminal TIM barrel domain K01M1_26600 PF06418 CTP synthase N-terminus K01M1_26600 PF00117 Glutamine amidotransferase class-I K01M1_26610 PF03819 MazG nucleotide pyrophosphohydrolase domain K01M1_26630 PF13291 ACT domain K01M1_26630 PF04607 Region found in RelA / SpoT proteins K01M1_26630 PF02824 TGS domain K01M1_26640 PF05958 tRNA (Uracil-5-)-methyltransferase K01M1_26640 PF01938 TRAM domain K01M1_26650 PF00672 HAMP domain K01M1_26650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K01M1_26650 PF00512 His Kinase A (phospho-acceptor) domain K01M1_26650 PF01627 Hpt domain K01M1_26650 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) K01M1_26650 PF00072 Response regulator receiver domain K01M1_26660 PF01648 4'-phosphopantetheinyl transferase superfamily K01M1_26670 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ K01M1_26680 PF02565 Recombination protein O C terminal K01M1_26680 PF11967 Recombination protein O N terminal K01M1_26690 PF01926 50S ribosome-binding GTPase K01M1_26690 PF07650 KH domain K01M1_26700 PF00035 Double-stranded RNA binding motif K01M1_26700 PF14622 Ribonuclease-III-like K01M1_26710 PF10502 Signal peptidase, peptidase S26 K01M1_26720 PF06421 GTP-binding protein LepA C-terminus K01M1_26720 PF03144 Elongation factor Tu domain 2 K01M1_26720 PF00009 Elongation factor Tu GTP binding domain K01M1_26720 PF00679 Elongation factor G C-terminus K01M1_26740 PF17188 MucB/RseB C-terminal domain K01M1_26740 PF03888 MucB/RseB N-terminal domain K01M1_26750 PF03873 Anti sigma-E protein RseA, C-terminal domain K01M1_26750 PF03872 Anti sigma-E protein RseA, N-terminal domain K01M1_26760 PF08281 Sigma-70, region 4 K01M1_26760 PF04542 Sigma-70 region 2 K01M1_26770 PF00890 FAD binding domain K01M1_26770 PF02910 Fumarate reductase flavoprotein C-term K01M1_26790 PF03937 Flavinator of succinate dehydrogenase K01M1_26830 PF01494 FAD binding domain K01M1_26840 PF01494 FAD binding domain K01M1_26850 PF03695 Uncharacterised protein family (UPF0149) K01M1_26860 PF05164 Cell division protein ZapA K01M1_26870 PF01812 5-formyltetrahydrofolate cyclo-ligase family K01M1_26880 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) K01M1_26890 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain K01M1_26890 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K01M1_26890 PF01842 ACT domain K01M1_26900 PF04402 Protein of unknown function (DUF541) K01M1_26910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K01M1_26910 PF03466 LysR substrate binding domain K01M1_26920 PF01810 LysE type translocator K01M1_26940 PF00924 Mechanosensitive ion channel K01M1_26940 PF05552 Conserved TM helix K01M1_26950 PF01116 Fructose-bisphosphate aldolase class-II K01M1_26960 PF00162 Phosphoglycerate kinase K01M1_26970 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain K01M1_26970 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain K01M1_26980 PF00593 TonB dependent receptor K01M1_26980 PF07715 TonB-dependent Receptor Plug Domain K01M1_26990 PF03466 LysR substrate binding domain K01M1_26990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K01M1_27000 PF02779 Transketolase, pyrimidine binding domain K01M1_27000 PF00456 Transketolase, thiamine diphosphate binding domain K01M1_27000 PF02780 Transketolase, C-terminal domain K01M1_27010 PF00438 S-adenosylmethionine synthetase, N-terminal domain K01M1_27010 PF02772 S-adenosylmethionine synthetase, central domain K01M1_27010 PF02773 S-adenosylmethionine synthetase, C-terminal domain K01M1_27030 PF17283 SprT-like zinc ribbon domain K01M1_27030 PF10263 SprT-like family K01M1_27040 PF04231 Endonuclease I K01M1_27050 PF04452 RNA methyltransferase K01M1_27060 PF02951 Prokaryotic glutathione synthetase, N-terminal domain K01M1_27060 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain K01M1_27070 PF02622 Uncharacterized ACR, COG1678 K01M1_27080 PF03652 Holliday junction resolvase K01M1_27090 PF00437 Type II/IV secretion system protein K01M1_27100 PF00437 Type II/IV secretion system protein K01M1_27110 PF01168 Alanine racemase, N-terminal domain K01M1_27120 PF03807 NADP oxidoreductase coenzyme F420-dependent K01M1_27120 PF14748 Pyrroline-5-carboxylate reductase dimerisation K01M1_27130 PF02325 YGGT family K01M1_27140 PF02594 Uncharacterised ACR, YggU family COG1872 K01M1_27160 PF01725 Ham1 family K01M1_27170 PF04055 Radical SAM superfamily K01M1_27170 PF06969 HemN C-terminal domain K01M1_27180 PF04960 Glutaminase K01M1_27190 PF02086 D12 class N6 adenine-specific DNA methyltransferase K01M1_27200 PF02390 Putative methyltransferase K01M1_27210 PF00633 Helix-hairpin-helix motif K01M1_27210 PF14815 NUDIX domain K01M1_27210 PF00730 HhH-GPD superfamily base excision DNA repair protein K01M1_27220 PF04362 Bacterial Fe(2+) trafficking K01M1_27230 PF01464 Transglycosylase SLT domain K01M1_27230 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain K01M1_27310 PF17200 Single Cache domain 2 K01M1_27310 PF00672 HAMP domain K01M1_27310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K01M1_27370 PF00171 Aldehyde dehydrogenase family K01M1_27480 PF04794 YdjC-like protein K01M1_27490 PF11975 Family 4 glycosyl hydrolase C-terminal domain K01M1_27490 PF02056 Family 4 glycosyl hydrolase K01M1_27500 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit K01M1_27510 PF02378 Phosphotransferase system, EIIC K01M1_27520 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit K01M1_27530 PF01522 Polysaccharide deacetylase K01M1_27560 PF10011 Predicted membrane protein (DUF2254) K01M1_27580 PF03739 Lipopolysaccharide export system permease LptF/LptG K01M1_27590 PF03739 Lipopolysaccharide export system permease LptF/LptG K01M1_27600 PF02789 Cytosol aminopeptidase family, N-terminal domain K01M1_27600 PF00883 Cytosol aminopeptidase family, catalytic domain K01M1_27610 PF04364 DNA polymerase III chi subunit, HolC K01M1_27620 PF10458 Valyl tRNA synthetase tRNA binding arm K01M1_27620 PF00133 tRNA synthetases class I (I, L, M and V) K01M1_27620 PF08264 Anticodon-binding domain of tRNA K01M1_27640 PF00583 Acetyltransferase (GNAT) family K01M1_27660 PF06877 Regulator of ribonuclease activity B K01M1_27680 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain K01M1_27680 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain K01M1_27700 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain K01M1_27700 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain K01M1_27710 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain K01M1_27710 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain K01M1_27720 PF01042 Endoribonuclease L-PSP K01M1_27730 PF01553 Acyltransferase K01M1_27740 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) K01M1_27750 PF01722 BolA-like protein K01M1_27770 PF05494 MlaC protein K01M1_27780 PF02470 MlaD protein K01M1_27790 PF02405 Permease MlaE K01M1_27800 PF00005 ABC transporter K01M1_27810 PF01699 Sodium/calcium exchanger protein K01M1_27820 PF01380 SIS domain K01M1_27820 PF00571 CBS domain K01M1_27840 PF03968 OstA-like protein K01M1_27850 PF00005 ABC transporter K01M1_27850 PF12399 Branched-chain amino acid ATP-binding cassette transporter K01M1_27860 PF00309 Sigma-54 factor, Activator interacting domain (AID) K01M1_27860 PF04963 Sigma-54 factor, core binding domain K01M1_27860 PF04552 Sigma-54, DNA binding domain K01M1_27870 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein K01M1_27880 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K01M1_27890 PF03668 P-loop ATPase protein family K01M1_27900 PF00381 PTS HPr component phosphorylation site K01M1_27910 PF03448 MgtE intracellular N domain K01M1_27910 PF01769 Divalent cation transporter K01M1_27910 PF00571 CBS domain K01M1_27920 PF01523 Putative modulator of DNA gyrase K01M1_27930 PF04751 Protein of unknown function (DUF615) K01M1_27940 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain K01M1_27940 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K01M1_27950 PF00849 RNA pseudouridylate synthase K01M1_27970 PF18337 RapA N-terminal Tudor like domain K01M1_27970 PF00271 Helicase conserved C-terminal domain K01M1_27970 PF12137 RNA polymerase recycling family C-terminal K01M1_27970 PF00176 SNF2 family N-terminal domain K01M1_27970 PF18339 RapA N-terminal Tudor like domain 1 K01M1_27980 PF02562 PhoH-like protein K01M1_27980 PF13638 PIN domain K01M1_27990 PF01523 Putative modulator of DNA gyrase K01M1_28000 PF00795 Carbon-nitrogen hydrolase K01M1_28010 PF13502 AsmA-like C-terminal region K01M1_28010 PF13116 Protein of unknown function K01M1_28020 PF10150 Ribonuclease E/G family K01M1_28020 PF00575 S1 RNA binding domain K01M1_28030 PF02545 Maf-like protein K01M1_28040 PF04093 rod shape-determining protein MreD K01M1_28050 PF04085 rod shape-determining protein MreC K01M1_28130 PF07963 Prokaryotic N-terminal methylation motif K01M1_28130 PF08334 Type II secretion system (T2SS), protein G K01M1_28150 PF00482 Type II secretion system (T2SS), protein F K01M1_28160 PF00437 Type II/IV secretion system protein K01M1_28180 PF13401 AAA domain K01M1_28180 PF01471 Putative peptidoglycan binding domain K01M1_28190 PF03958 Bacterial type II/III secretion system short domain K01M1_28190 PF00263 Bacterial type II and III secretion system protein K01M1_28230 PF00990 Diguanylate cyclase, GGDEF domain K01M1_28230 PF17157 Gammaproteobacterial periplasmic sensor domain K01M1_28230 PF00563 EAL domain K01M1_28240 PF00436 Single-strand binding protein family K01M1_28250 PF00196 Bacterial regulatory proteins, luxR family K01M1_28260 PF00483 Nucleotidyl transferase K01M1_28270 PF17760 UvrA interaction domain K01M1_28270 PF00005 ABC transporter K01M1_28270 PF17755 UvrA DNA-binding domain K01M1_28310 PF00266 Aminotransferase class-V K01M1_28320 PF00696 Amino acid kinase family K01M1_28320 PF01842 ACT domain K01M1_28330 PF02607 B12 binding domain K01M1_28330 PF02965 Vitamin B12 dependent methionine synthase, activation domain K01M1_28330 PF00809 Pterin binding enzyme K01M1_28330 PF02574 Homocysteine S-methyltransferase K01M1_28330 PF02310 B12 binding domain K01M1_28340 PF00999 Sodium/hydrogen exchanger family K01M1_28460 PF01507 Phosphoadenosine phosphosulfate reductase family K01M1_28470 PF01077 Nitrite and sulphite reductase 4Fe-4S domain K01M1_28470 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain K01M1_28480 PF00258 Flavodoxin K01M1_28480 PF00175 Oxidoreductase NAD-binding domain K01M1_28480 PF00667 FAD binding domain K01M1_28520 PF01207 Dihydrouridine synthase (Dus) K01M1_28530 PF01475 Ferric uptake regulator family K01M1_28550 PF00342 Phosphoglucose isomerase K01M1_28560 PF01894 Uncharacterised protein family UPF0047 K01M1_28570 PF01168 Alanine racemase, N-terminal domain K01M1_28570 PF00842 Alanine racemase, C-terminal domain K01M1_28580 PF00772 DnaB-like helicase N terminal domain K01M1_28580 PF03796 DnaB-like helicase C terminal domain K01M1_28600 PF01281 Ribosomal protein L9, N-terminal domain K01M1_28600 PF03948 Ribosomal protein L9, C-terminal domain K01M1_28610 PF01084 Ribosomal protein S18 K01M1_28620 PF00436 Single-strand binding protein family K01M1_28630 PF01250 Ribosomal protein S6 K01M1_28640 PF00834 Ribulose-phosphate 3 epimerase family K01M1_28650 PF02086 D12 class N6 adenine-specific DNA methyltransferase K01M1_28670 PF01761 3-dehydroquinate synthase K01M1_28680 PF01202 Shikimate kinase K01M1_28690 PF11741 AMIN domain K01M1_28690 PF03958 Bacterial type II/III secretion system short domain K01M1_28690 PF07660 Secretin and TonB N terminus short domain K01M1_28690 PF00263 Bacterial type II and III secretion system protein K01M1_28740 PF00905 Penicillin binding protein transpeptidase domain K01M1_28740 PF00912 Transglycosylase K01M1_28740 PF17092 Penicillin-binding protein OB-like domain K01M1_28750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K01M1_28750 PF03466 LysR substrate binding domain K01M1_28760 PF08534 Redoxin K01M1_28760 PF00462 Glutaredoxin K01M1_28770 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K01M1_28770 PF07992 Pyridine nucleotide-disulphide oxidoreductase K01M1_28800 PF14698 Argininosuccinate lyase C-terminal K01M1_28800 PF00583 Acetyltransferase (GNAT) family K01M1_28800 PF00206 Lyase K01M1_28810 PF00764 Arginosuccinate synthase K01M1_28820 PF00696 Amino acid kinase family K01M1_28830 PF01118 Semialdehyde dehydrogenase, NAD binding domain K01M1_28830 PF02774 Semialdehyde dehydrogenase, dimerisation domain K01M1_28840 PF01546 Peptidase family M20/M25/M40 K01M1_28840 PF07687 Peptidase dimerisation domain K01M1_28850 PF00311 Phosphoenolpyruvate carboxylase K01M1_28870 PF02219 Methylenetetrahydrofolate reductase K01M1_28880 PF00696 Amino acid kinase family K01M1_28880 PF00742 Homoserine dehydrogenase K01M1_28880 PF03447 Homoserine dehydrogenase, NAD binding domain K01M1_28890 PF01053 Cys/Met metabolism PLP-dependent enzyme K01M1_28910 PF03949 Malic enzyme, NAD binding domain K01M1_28910 PF00390 Malic enzyme, N-terminal domain K01M1_28920 PF00210 Ferritin-like domain K01M1_28930 PF04324 BFD-like [2Fe-2S] binding domain K01M1_28940 PF00009 Elongation factor Tu GTP binding domain K01M1_28940 PF03144 Elongation factor Tu domain 2 K01M1_28940 PF03143 Elongation factor Tu C-terminal domain K01M1_28950 PF03764 Elongation factor G, domain IV K01M1_28950 PF03144 Elongation factor Tu domain 2 K01M1_28950 PF14492 Elongation Factor G, domain II K01M1_28950 PF00009 Elongation factor Tu GTP binding domain K01M1_28950 PF00679 Elongation factor G C-terminus K01M1_28960 PF00177 Ribosomal protein S7p/S5e K01M1_28970 PF00164 Ribosomal protein S12/S23 K01M1_28980 PF04077 DsrH like protein K01M1_28990 PF02635 DsrE/DsrF-like family K01M1_29000 PF02635 DsrE/DsrF-like family K01M1_29010 PF08348 YheO-like PAS domain K01M1_29010 PF13309 HTH domain K01M1_29020 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase K01M1_29020 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase K01M1_29040 PF04102 SlyX K01M1_29050 PF01112 Asparaginase K01M1_29060 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase K01M1_29080 PF00999 Sodium/hydrogen exchanger family K01M1_29080 PF02254 TrkA-N domain K01M1_29090 PF02525 Flavodoxin-like fold K01M1_29100 PF12848 ABC transporter K01M1_29100 PF00005 ABC transporter K01M1_29120 PF00561 alpha/beta hydrolase fold K01M1_29130 PF06794 Uncharacterised protein family (UPF0270) K01M1_29140 PF00485 Phosphoribulokinase / Uridine kinase family K01M1_29150 PF00027 Cyclic nucleotide-binding domain K01M1_29150 PF13545 Crp-like helix-turn-helix domain K01M1_29170 PF00171 Aldehyde dehydrogenase family K01M1_29180 PF04958 Arginine N-succinyltransferase beta subunit K01M1_29190 PF00202 Aminotransferase class-III K01M1_29200 PF00117 Glutamine amidotransferase class-I K01M1_29230 PF00579 tRNA synthetases class I (W and Y) K01M1_29240 PF13419 Haloacid dehalogenase-like hydrolase K01M1_29250 PF08032 RNA 2'-O ribose methyltransferase substrate binding K01M1_29250 PF00588 SpoU rRNA Methylase family K01M1_29260 PF00575 S1 RNA binding domain K01M1_29260 PF00773 RNB domain K01M1_29260 PF08206 Ribonuclease B OB domain K01M1_29260 PF08461 Ribonuclease R winged-helix domain K01M1_29260 PF17876 Cold shock domain K01M1_29270 PF02082 Transcriptional regulator K01M1_29280 PF00042 Globin K01M1_29280 PF00175 Oxidoreductase NAD-binding domain K01M1_29280 PF00970 Oxidoreductase FAD-binding domain K01M1_29290 PF08238 Sel1 repeat K01M1_29300 PF00709 Adenylosuccinate synthetase K01M1_29310 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) K01M1_29320 PF01145 SPFH domain / Band 7 family K01M1_29330 PF12221 Bacterial membrane protein N terminal K01M1_29330 PF01145 SPFH domain / Band 7 family K01M1_29340 PF01926 50S ribosome-binding GTPase K01M1_29340 PF16360 GTP-binding GTPase Middle Region K01M1_29340 PF13167 GTP-binding GTPase N-terminal K01M1_29350 PF17209 Hfq protein K01M1_29370 PF08676 MutL C terminal dimerisation domain K01M1_29370 PF01119 DNA mismatch repair protein, C-terminal domain K01M1_29380 PF01520 N-acetylmuramoyl-L-alanine amidase K01M1_29390 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE K01M1_29410 PF08331 Domain of unknown function (DUF1730) K01M1_29540 PF00929 Exonuclease K01M1_29550 PF03193 RsgA GTPase K01M1_29560 PF02666 Phosphatidylserine decarboxylase K01M1_29570 PF00939 Sodium:sulfate symporter transmembrane region K01M1_29590 PF06415 BPG-independent PGAM N-terminus (iPGM_N) K01M1_29590 PF01676 Metalloenzyme superfamily K01M1_29600 PF00581 Rhodanese-like domain K01M1_29610 PF02556 Preprotein translocase subunit SecB K01M1_29620 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus K01M1_29620 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus K01M1_29630 PF06426 Serine acetyltransferase, N-terminal K01M1_29630 PF00132 Bacterial transferase hexapeptide (six repeats) K01M1_29640 PF01551 Peptidase family M23 K01M1_29660 PF00440 Bacterial regulatory proteins, tetR family K01M1_29660 PF08360 QacR-like protein, C-terminal region K01M1_29680 PF00152 tRNA synthetases class II (D, K and N) K01M1_29690 PF00890 FAD binding domain K01M1_29690 PF02910 Fumarate reductase flavoprotein C-term K01M1_29700 PF13183 4Fe-4S dicluster domain K01M1_29700 PF13085 2Fe-2S iron-sulfur cluster binding domain K01M1_29710 PF02300 Fumarate reductase subunit C K01M1_29720 PF02313 Fumarate reductase subunit D K01M1_29740 PF01132 Elongation factor P (EF-P) OB domain K01M1_29740 PF08207 Elongation factor P (EF-P) KOW-like domain K01M1_29740 PF09285 Elongation factor P, C-terminal K01M1_29750 PF04055 Radical SAM superfamily K01M1_29760 PF02308 MgtC family K01M1_29780 PF00118 TCP-1/cpn60 chaperonin family K01M1_29790 PF00166 Chaperonin 10 Kd subunit K01M1_29800 PF01554 MatE K01M1_29810 PF00365 Phosphofructokinase K01M1_29820 PF01545 Cation efflux family K01M1_29820 PF16916 Dimerisation domain of Zinc Transporter K01M1_29830 PF07813 LTXXQ motif family protein K01M1_29840 PF00486 Transcriptional regulatory protein, C terminal K01M1_29840 PF00072 Response regulator receiver domain K01M1_29850 PF00512 His Kinase A (phospho-acceptor) domain K01M1_29850 PF16527 Two-component sensor protein CpxA, periplasmic domain K01M1_29850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K01M1_29850 PF00672 HAMP domain K01M1_29860 PF02777 Iron/manganese superoxide dismutases, C-terminal domain K01M1_29860 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain K01M1_29870 PF00588 SpoU rRNA Methylase family K01M1_29880 PF04186 FxsA cytoplasmic membrane protein K01M1_29890 PF10415 Fumarase C C-terminus K01M1_29890 PF00206 Lyase K01M1_29900 PF03605 Anaerobic c4-dicarboxylate membrane transporter K01M1_29910 PF11412 Disulphide bond corrector protein DsbC K01M1_29910 PF02683 Cytochrome C biogenesis protein transmembrane region K01M1_29920 PF00196 Bacterial regulatory proteins, luxR family K01M1_29920 PF00072 Response regulator receiver domain K01M1_29930 PF02080 TrkA-C domain K01M1_29930 PF00999 Sodium/hydrogen exchanger family K01M1_29930 PF03471 Transporter associated domain K01M1_29950 PF00474 Sodium:solute symporter family K01M1_29980 PF10415 Fumarase C C-terminus K01M1_29980 PF00206 Lyase K01M1_29990 PF00072 Response regulator receiver domain K01M1_29990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K01M1_29990 PF09308 LuxQ, periplasmic K01M1_29990 PF00512 His Kinase A (phospho-acceptor) domain K01M1_30000 PF12832 MFS_1 like family K01M1_30030 PF13193 AMP-binding enzyme C-terminal domain K01M1_30030 PF16177 Acetyl-coenzyme A synthetase N-terminus K01M1_30030 PF00501 AMP-binding enzyme K01M1_30040 PF01220 Dehydroquinase class II K01M1_30050 PF00364 Biotin-requiring enzyme K01M1_30060 PF00289 Biotin carboxylase, N-terminal domain K01M1_30060 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain K01M1_30060 PF02785 Biotin carboxylase C-terminal domain K01M1_30080 PF01207 Dihydrouridine synthase (Dus) K01M1_30090 PF02954 Bacterial regulatory protein, Fis family K01M1_30110 PF12848 ABC transporter K01M1_30110 PF00005 ABC transporter K01M1_30210 PF01276 Orn/Lys/Arg decarboxylase, major domain K01M1_30210 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain K01M1_30210 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain K01M1_30220 PF13520 Amino acid permease K01M1_30230 PF18500 CadC C-terminal domain 1 K01M1_30230 PF00486 Transcriptional regulatory protein, C terminal K01M1_30240 PF13411 MerR HTH family regulatory protein K01M1_30250 PF01808 AICARFT/IMPCHase bienzyme K01M1_30250 PF02142 MGS-like domain K01M1_30260 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain K01M1_30260 PF02843 Phosphoribosylglycinamide synthetase, C domain K01M1_30260 PF02844 Phosphoribosylglycinamide synthetase, N domain K01M1_30280 PF00216 Bacterial DNA-binding protein K01M1_30290 PF00571 CBS domain K01M1_30290 PF01595 Cyclin M transmembrane N-terminal domain K01M1_30300 PF04222 Protein of unknown function (DUF416) K01M1_30310 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain K01M1_30320 PF03167 Uracil DNA glycosylase superfamily K01M1_30330 PF01208 Uroporphyrinogen decarboxylase (URO-D) K01M1_30340 PF00293 NUDIX domain K01M1_30340 PF09297 NADH pyrophosphatase zinc ribbon domain K01M1_30350 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ K01M1_30360 PF00623 RNA polymerase Rpb1, domain 2 K01M1_30360 PF04997 RNA polymerase Rpb1, domain 1 K01M1_30360 PF04983 RNA polymerase Rpb1, domain 3 K01M1_30360 PF04998 RNA polymerase Rpb1, domain 5 K01M1_30360 PF05000 RNA polymerase Rpb1, domain 4 K01M1_30370 PF00562 RNA polymerase Rpb2, domain 6 K01M1_30370 PF10385 RNA polymerase beta subunit external 1 domain K01M1_30370 PF04565 RNA polymerase Rpb2, domain 3 K01M1_30370 PF04561 RNA polymerase Rpb2, domain 2 K01M1_30370 PF04563 RNA polymerase beta subunit K01M1_30370 PF04560 RNA polymerase Rpb2, domain 7 K01M1_30380 PF00542 Ribosomal protein L7/L12 C-terminal domain K01M1_30380 PF16320 Ribosomal protein L7/L12 dimerisation domain K01M1_30390 PF00466 Ribosomal protein L10 K01M1_30400 PF00687 Ribosomal protein L1p/L10e family K01M1_30410 PF03946 Ribosomal protein L11, N-terminal domain K01M1_30410 PF00298 Ribosomal protein L11, RNA binding domain K01M1_30420 PF02357 Transcription termination factor nusG K01M1_30420 PF00467 KOW motif K01M1_30430 PF00584 SecE/Sec61-gamma subunits of protein translocation complex K01M1_30440 PF03143 Elongation factor Tu C-terminal domain K01M1_30440 PF00009 Elongation factor Tu GTP binding domain K01M1_30440 PF03144 Elongation factor Tu domain 2 K01M1_30490 PF00485 Phosphoribulokinase / Uridine kinase family K01M1_30500 PF02237 Biotin protein ligase C terminal domain K01M1_30500 PF03099 Biotin/lipoate A/B protein ligase family K01M1_30500 PF08279 HTH domain K01M1_30510 PF01565 FAD binding domain K01M1_30510 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain K01M1_30530 PF13091 PLD-like domain K01M1_30680 PF01177 Asp/Glu/Hydantoin racemase K01M1_30700 PF07715 TonB-dependent Receptor Plug Domain K01M1_30700 PF00593 TonB dependent receptor K01M1_30710 PF05958 tRNA (Uracil-5-)-methyltransferase K01M1_30730 PF00440 Bacterial regulatory proteins, tetR family K01M1_30740 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K01M1_30740 PF07992 Pyridine nucleotide-disulphide oxidoreductase K01M1_30750 PF01554 MatE K01M1_30760 PF04072 Leucine carboxyl methyltransferase K01M1_30770 PF00717 Peptidase S24-like K01M1_30770 PF01726 LexA DNA binding domain K01M1_30780 PF01553 Acyltransferase K01M1_30790 PF01040 UbiA prenyltransferase family K01M1_30800 PF04345 Chorismate lyase K01M1_30810 PF03748 Flagellar basal body-associated protein FliL K01M1_30820 PF01694 Rhomboid family K01M1_30820 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease K01M1_30830 PF00581 Rhodanese-like domain K01M1_30840 PF04545 Sigma-70, region 4 K01M1_30840 PF04542 Sigma-70 region 2 K01M1_30840 PF00140 Sigma-70 factor, region 1.2 K01M1_30850 PF18075 FtsX extracellular domain K01M1_30860 PF00005 ABC transporter K01M1_30870 PF00448 SRP54-type protein, GTPase domain K01M1_30870 PF02881 SRP54-type protein, helical bundle domain K01M1_30900 PF01914 MarC family integral membrane protein K01M1_30940 PF10694 Protein of unknown function (DUF2500) K01M1_30980 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain K01M1_30980 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain K01M1_30990 PF01022 Bacterial regulatory protein, arsR family K01M1_31000 PF08668 HDOD domain K01M1_31000 PF00563 EAL domain K01M1_31010 PF01810 LysE type translocator K01M1_31020 PF12146 Serine aminopeptidase, S33 K01M1_31070 PF00563 EAL domain K01M1_31070 PF08495 FIST N domain K01M1_31070 PF10442 FIST C domain K01M1_31070 PF00990 Diguanylate cyclase, GGDEF domain K01M1_31080 PF13419 Haloacid dehalogenase-like hydrolase K01M1_31090 PF02899 Phage integrase, N-terminal SAM-like domain K01M1_31090 PF00589 Phage integrase family K01M1_31110 PF01678 Diaminopimelate epimerase K01M1_31120 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain K01M1_31120 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain K01M1_31130 PF01491 Frataxin-like domain K01M1_31140 PF12633 Adenylate cyclase NT domain K01M1_31140 PF01295 Adenylate cyclase, class-I K01M1_31150 PF03900 Porphobilinogen deaminase, C-terminal domain K01M1_31150 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain K01M1_31160 PF02602 Uroporphyrinogen-III synthase HemD K01M1_31170 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase K01M1_31180 PF07219 HemY protein N-terminus K01M1_31260 PF00175 Oxidoreductase NAD-binding domain K01M1_31270 PF00111 2Fe-2S iron-sulfur cluster binding domain K01M1_31280 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K01M1_31300 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain K01M1_31300 PF07497 Rho termination factor, RNA-binding domain K01M1_31300 PF07498 Rho termination factor, N-terminal domain K01M1_31310 PF00085 Thioredoxin K01M1_31320 PF00270 DEAD/DEAH box helicase K01M1_31320 PF00271 Helicase conserved C-terminal domain K01M1_31330 PF02541 Ppx/GppA phosphatase family K01M1_31350 PF02592 Putative vitamin uptake transporter K01M1_31370 PF16124 RecQ zinc-binding K01M1_31370 PF00570 HRDC domain K01M1_31370 PF00271 Helicase conserved C-terminal domain K01M1_31370 PF09382 RQC domain K01M1_31370 PF00270 DEAD/DEAH box helicase K01M1_31380 PF00892 EamA-like transporter family K01M1_31400 PF01810 LysE type translocator K01M1_31420 PF13361 UvrD-like helicase C-terminal domain K01M1_31420 PF00580 UvrD/REP helicase N-terminal domain K01M1_31440 PF05114 Protein of unknown function (DUF692) K01M1_31480 PF07690 Major Facilitator Superfamily K01M1_31490 PF03466 LysR substrate binding domain K01M1_31490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K01M1_31500 PF01321 Creatinase/Prolidase N-terminal domain K01M1_31500 PF01321 Creatinase/Prolidase N-terminal domain K01M1_31500 PF00557 Metallopeptidase family M24 K01M1_31500 PF00557 Metallopeptidase family M24 K01M1_31510 PF04055 Radical SAM superfamily K01M1_31510 PF06968 Biotin and Thiamin Synthesis associated domain K01M1_31520 PF05690 Thiazole biosynthesis protein ThiG K01M1_31530 PF02597 ThiS family K01M1_31540 PF00899 ThiF family K01M1_31550 PF02581 Thiamine monophosphate synthase K01M1_31560 PF01964 Radical SAM ThiC family K01M1_31560 PF13667 ThiC-associated domain K01M1_31570 PF02537 CrcB-like protein, Camphor Resistance (CrcB) K01M1_31580 PF00394 Multicopper oxidase K01M1_31580 PF07731 Multicopper oxidase K01M1_31580 PF07732 Multicopper oxidase K01M1_31680 PF00132 Bacterial transferase hexapeptide (six repeats) K01M1_31690 PF07369 Protein of unknown function (DUF1488) K01M1_31700 PF01488 Shikimate / quinate 5-dehydrogenase K01M1_31700 PF18317 Shikimate 5'-dehydrogenase C-terminal domain K01M1_31700 PF08501 Shikimate dehydrogenase substrate binding domain K01M1_31710 PF01218 Coproporphyrinogen III oxidase K01M1_31720 PF01300 Telomere recombination K01M1_31730 PF00731 AIR carboxylase K01M1_31740 PF02222 ATP-grasp domain K01M1_31740 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain K01M1_31750 PF01396 Topoisomerase DNA binding C4 zinc finger K01M1_31760 PF04361 Protein of unknown function (DUF494) K01M1_31770 PF17782 DprA winged helix domain K01M1_31770 PF02481 DNA recombination-mediator protein A K01M1_31790 PF01327 Polypeptide deformylase K01M1_31800 PF00551 Formyl transferase K01M1_31800 PF02911 Formyl transferase, C-terminal domain K01M1_31810 PF01029 NusB family K01M1_31810 PF01189 16S rRNA methyltransferase RsmB/F K01M1_31820 PF02080 TrkA-C domain K01M1_31820 PF02254 TrkA-N domain K01M1_31830 PF02386 Cation transport protein K01M1_31850 PF03006 Haemolysin-III related K01M1_31860 PF07070 SpoOM protein K01M1_31880 PF06288 Protein of unknown function (DUF1040) K01M1_31890 PF13746 4Fe-4S dicluster domain K01M1_31890 PF12801 4Fe-4S binding domain K01M1_31890 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase K01M1_31900 PF01636 Phosphotransferase enzyme family K01M1_31910 PF01323 DSBA-like thioredoxin domain K01M1_31920 PF01553 Acyltransferase K01M1_31940 PF13335 Magnesium chelatase, subunit ChlI C-terminal K01M1_31940 PF01078 Magnesium chelatase, subunit ChlI K01M1_31950 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K01M1_31950 PF00205 Thiamine pyrophosphate enzyme, central domain K01M1_31950 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain K01M1_31970 PF01063 Amino-transferase class IV K01M1_31980 PF00920 Dehydratase family K01M1_31990 PF00585 C-terminal regulatory domain of Threonine dehydratase K01M1_31990 PF00291 Pyridoxal-phosphate dependent enzyme K01M1_32000 PF03466 LysR substrate binding domain K01M1_32000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K01M1_32010 PF07690 Major Facilitator Superfamily K01M1_32020 PF00497 Bacterial extracellular solute-binding proteins, family 3 K01M1_32030 PF00528 Binding-protein-dependent transport system inner membrane component K01M1_32040 PF00132 Bacterial transferase hexapeptide (six repeats) K01M1_32040 PF12804 MobA-like NTP transferase domain K01M1_32060 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain K01M1_32060 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain K01M1_32070 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain K01M1_32070 PF02874 ATP synthase alpha/beta family, beta-barrel domain K01M1_32080 PF00231 ATP synthase K01M1_32090 PF00306 ATP synthase alpha/beta chain, C terminal domain K01M1_32090 PF02874 ATP synthase alpha/beta family, beta-barrel domain K01M1_32090 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain K01M1_32100 PF00213 ATP synthase delta (OSCP) subunit K01M1_32110 PF00430 ATP synthase B/B' CF(0) K01M1_32120 PF00137 ATP synthase subunit C K01M1_32130 PF00119 ATP synthase A chain K01M1_32140 PF03899 ATP synthase I chain K01M1_32150 PF17762 HTH domain found in ParB protein K01M1_32150 PF02195 ParB-like nuclease domain K01M1_32160 PF13614 AAA domain K01M1_32170 PF02527 rRNA small subunit methyltransferase G K01M1_32180 PF01134 Glucose inhibited division protein A K01M1_32180 PF13932 GidA associated domain K01M1_32190 PF00258 Flavodoxin K01M1_32200 PF12631 MnmE helical domain K01M1_32200 PF10396 GTP-binding protein TrmE N-terminus K01M1_32200 PF01926 50S ribosome-binding GTPase K01M1_32210 PF02096 60Kd inner membrane protein K01M1_32210 PF14849 YidC periplasmic domain K01M1_32220 PF00825 Ribonuclease P K01M1_32230 PF00468 Ribosomal protein L34 K01M1_32240 PF00005 ABC transporter K01M1_32250 PF00528 Binding-protein-dependent transport system inner membrane component K01M1_32260 PF00497 Bacterial extracellular solute-binding proteins, family 3 K01M1_32270 PF13614 AAA domain K01M1_32270 PF18607 ParA helix turn helix domain K01M1_32280 PF02195 ParB-like nuclease domain K01M1_32280 PF08775 ParB family K01M1_32290 PF05127 Helicase K01M1_32290 PF13718 GNAT acetyltransferase 2 K01M1_32310 PF00132 Bacterial transferase hexapeptide (six repeats) K01M1_32320 PF03466 LysR substrate binding domain K01M1_32320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K01M1_32330 PF03575 Peptidase family S51 K01M1_32340 PF00267 Gram-negative porin K01M1_32350 PF02378 Phosphotransferase system, EIIC K01M1_32350 PF00367 phosphotransferase system, EIIB K01M1_32360 PF01380 SIS domain K01M1_32370 PF01380 SIS domain K01M1_32370 PF01418 Helix-turn-helix domain, rpiR family K01M1_32380 PF00246 Zinc carboxypeptidase K01M1_32390 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle K01M1_32400 PF03358 NADPH-dependent FMN reductase K01M1_32430 PF00664 ABC transporter transmembrane region K01M1_32430 PF03412 Peptidase C39 family K01M1_32430 PF00005 ABC transporter K01M1_32460 PF00529 HlyD membrane-fusion protein of T1SS K01M1_32470 PF00158 Sigma-54 interaction domain K01M1_32470 PF02954 Bacterial regulatory protein, Fis family K01M1_32470 PF00072 Response regulator receiver domain K01M1_32480 PF02743 Cache domain K01M1_32480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K01M1_32480 PF00512 His Kinase A (phospho-acceptor) domain K01M1_32490 PF01243 Pyridoxamine 5'-phosphate oxidase K01M1_32490 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region K01M1_32510 PF12833 Helix-turn-helix domain K01M1_32520 PF01619 Proline dehydrogenase K01M1_32520 PF14850 DNA-binding domain of Proline dehydrogenase K01M1_32520 PF18327 Proline utilization A proline dehydrogenase N-terminal domain K01M1_32520 PF00171 Aldehyde dehydrogenase family K01M1_32540 PF00474 Sodium:solute symporter family K01M1_32600 PF01037 Lrp/AsnC ligand binding domain K01M1_32620 PF00005 ABC transporter K01M1_32620 PF00664 ABC transporter transmembrane region K01M1_32640 PF00271 Helicase conserved C-terminal domain K01M1_32640 PF00270 DEAD/DEAH box helicase K01M1_32650 PF03475 3-alpha domain K01M1_32650 PF03473 MOSC domain K01M1_32690 PF08281 Sigma-70, region 4 K01M1_32690 PF04542 Sigma-70 region 2 K01M1_32700 PF12833 Helix-turn-helix domain K01M1_32700 PF01965 DJ-1/PfpI family K01M1_32710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K01M1_32710 PF03466 LysR substrate binding domain K01M1_32740 PF07992 Pyridine nucleotide-disulphide oxidoreductase K01M1_32740 PF13192 Thioredoxin domain K01M1_32750 PF10417 C-terminal domain of 1-Cys peroxiredoxin K01M1_32750 PF00578 AhpC/TSA family K01M1_32830 PF01047 MarR family K01M1_32840 PF02566 OsmC-like protein K01M1_32860 PF12833 Helix-turn-helix domain K01M1_32920 PF00005 ABC transporter K01M1_32960 PF00367 phosphotransferase system, EIIB K01M1_32960 PF02378 Phosphotransferase system, EIIC K01M1_32970 PF00486 Transcriptional regulatory protein, C terminal K01M1_32970 PF00072 Response regulator receiver domain K01M1_32980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K01M1_32980 PF08521 Two-component sensor kinase N-terminal K01M1_32980 PF00512 His Kinase A (phospho-acceptor) domain K01M1_32990 PF01547 Bacterial extracellular solute-binding protein K01M1_33000 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain K01M1_33000 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain K01M1_33010 PF06276 Ferric iron reductase FhuF-like transporter K01M1_33010 PF04183 IucA / IucC family K01M1_33030 PF04183 IucA / IucC family K01M1_33030 PF06276 Ferric iron reductase FhuF-like transporter K01M1_33040 PF00206 Lyase K01M1_33040 PF02655 ATP-grasp domain K01M1_33050 PF07715 TonB-dependent Receptor Plug Domain K01M1_33050 PF00593 TonB dependent receptor K01M1_33060 PF07660 Secretin and TonB N terminus short domain K01M1_33060 PF00593 TonB dependent receptor K01M1_33060 PF07715 TonB-dependent Receptor Plug Domain K01M1_33070 PF01497 Periplasmic binding protein K01M1_33080 PF01032 FecCD transport family K01M1_33090 PF01032 FecCD transport family K01M1_33100 PF00005 ABC transporter K01M1_33110 PF17200 Single Cache domain 2 K01M1_33110 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K01M1_33110 PF00672 HAMP domain K01M1_33120 PF00675 Insulinase (Peptidase family M16) K01M1_33120 PF05193 Peptidase M16 inactive domain K01M1_33140 PF04225 Opacity-associated protein A LysM-like domain K01M1_33140 PF01551 Peptidase family M23 K01M1_33170 PF07690 Major Facilitator Superfamily K01M1_33180 PF02796 Helix-turn-helix domain of resolvase K01M1_33180 PF00239 Resolvase, N terminal domain K01M1_33190 PF00356 Bacterial regulatory proteins, lacI family K01M1_33200 PF00474 Sodium:solute symporter family K01M1_33230 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component K01M1_33250 PF03480 Bacterial extracellular solute-binding protein, family 7 K01M1_33260 PF00356 Bacterial regulatory proteins, lacI family K01M1_33270 PF03328 HpcH/HpaI aldolase/citrate lyase family K01M1_33310 PF00561 alpha/beta hydrolase fold K01M1_33340 PF07690 Major Facilitator Superfamily K01M1_33350 PF00474 Sodium:solute symporter family K01M1_33360 PF03315 Serine dehydratase beta chain K01M1_33360 PF03313 Serine dehydratase alpha chain K01M1_33370 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) K01M1_33370 PF00128 Alpha amylase, catalytic domain K01M1_33380 PF02264 LamB porin K01M1_33410 PF02903 Alpha amylase, N-terminal ig-like domain K01M1_33410 PF16657 Maltogenic Amylase, C-terminal domain K01M1_33410 PF00128 Alpha amylase, catalytic domain K01M1_33420 PF04231 Endonuclease I K01M1_33430 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) K01M1_33430 PF11852 Domain of unknown function (DUF3372) K01M1_33430 PF18494 Pullulanase Ins domain K01M1_33430 PF17967 Pullulanase N2 domain K01M1_33430 PF03714 Bacterial pullanase-associated domain K01M1_33460 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain K01M1_33460 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain K01M1_33460 PF01276 Orn/Lys/Arg decarboxylase, major domain K01M1_33470 PF13520 Amino acid permease K01M1_33490 PF08543 Phosphomethylpyrimidine kinase K01M1_33500 PF00375 Sodium:dicarboxylate symporter family K01M1_33510 PF03193 RsgA GTPase K01M1_33520 PF00367 phosphotransferase system, EIIB K01M1_33520 PF02378 Phosphotransferase system, EIIC K01M1_33530 PF02630 SCO1/SenC K01M1_33560 PF00196 Bacterial regulatory proteins, luxR family K01M1_33560 PF17874 MalT-like TPR region K01M1_33570 PF00343 Carbohydrate phosphorylase K01M1_33580 PF02446 4-alpha-glucanotransferase K01M1_33590 PF00128 Alpha amylase, catalytic domain K01M1_33590 PF02806 Alpha amylase, C-terminal all-beta domain K01M1_33590 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) K01M1_33600 PF00912 Transglycosylase K01M1_33610 PF00128 Alpha amylase, catalytic domain K01M1_33630 PF07670 Nucleoside recognition K01M1_33640 PF07670 Nucleoside recognition K01M1_33650 PF07687 Peptidase dimerisation domain K01M1_33650 PF01546 Peptidase family M20/M25/M40 K01M1_33660 PF06803 Protein of unknown function (DUF1232) K01M1_33670 PF00375 Sodium:dicarboxylate symporter family K01M1_33690 PF03466 LysR substrate binding domain K01M1_33690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K01M1_33700 PF08803 Putative mono-oxygenase ydhR K01M1_33720 PF13807 G-rich domain on putative tyrosine kinase K01M1_33720 PF13614 AAA domain K01M1_33720 PF02706 Chain length determinant protein K01M1_33730 PF01451 Low molecular weight phosphotyrosine protein phosphatase K01M1_33740 PF02563 Polysaccharide biosynthesis/export protein K01M1_33740 PF10531 SLBB domain K01M1_33740 PF18412 Outer-membrane lipoprotein Wza C-terminal domain K01M1_33760 PF00881 Nitroreductase family K01M1_33850 PF07670 Nucleoside recognition K01M1_33860 PF07670 Nucleoside recognition K01M1_33870 PF07687 Peptidase dimerisation domain K01M1_33870 PF01546 Peptidase family M20/M25/M40 K01M1_33880 PF06803 Protein of unknown function (DUF1232) K01M1_33890 PF00375 Sodium:dicarboxylate symporter family K01M1_33910 PF03466 LysR substrate binding domain K01M1_33910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K01M1_33920 PF08803 Putative mono-oxygenase ydhR K01M1_33940 PF13807 G-rich domain on putative tyrosine kinase K01M1_33940 PF02706 Chain length determinant protein K01M1_33940 PF13614 AAA domain K01M1_33950 PF01451 Low molecular weight phosphotyrosine protein phosphatase K01M1_33960 PF02563 Polysaccharide biosynthesis/export protein K01M1_33960 PF10531 SLBB domain K01M1_33960 PF18412 Outer-membrane lipoprotein Wza C-terminal domain K01M1_33980 PF00881 Nitroreductase family K01M1_33990 PF01914 MarC family integral membrane protein K01M1_34000 PF01734 Patatin-like phospholipase K01M1_34010 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading K01M1_34010 PF18416 N-acetylglucosamine binding protein domain 2 K01M1_34020 PF02469 Fasciclin domain K01M1_34030 PF00875 DNA photolyase K01M1_34030 PF03441 FAD binding domain of DNA photolyase K01M1_34060 PF00561 alpha/beta hydrolase fold K01M1_34070 PF00768 D-alanyl-D-alanine carboxypeptidase K01M1_34070 PF07943 Penicillin-binding protein 5, C-terminal domain K01M1_34080 PF00128 Alpha amylase, catalytic domain K01M1_34080 PF00686 Starch binding domain K01M1_34090 PF12833 Helix-turn-helix domain K01M1_34090 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term K01M1_34100 PF00881 Nitroreductase family K01M1_34120 PF03466 LysR substrate binding domain K01M1_34120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K01M1_34130 PF09905 DNA-binding protein VF530 K01M1_34160 PF00175 Oxidoreductase NAD-binding domain K01M1_34160 PF00970 Oxidoreductase FAD-binding domain K01M1_34180 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) K01M1_34190 PF01594 AI-2E family transporter K01M1_34210 PF13533 Biotin-lipoyl like K01M1_34240 PF04632 Fusaric acid resistance protein family K01M1_34250 PF00892 EamA-like transporter family K01M1_34260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K01M1_34260 PF03466 LysR substrate binding domain K01M1_34270 PF07690 Major Facilitator Superfamily K01M1_34290 PF00583 Acetyltransferase (GNAT) family K01M1_34310 PF00072 Response regulator receiver domain K01M1_34310 PF00486 Transcriptional regulatory protein, C terminal K01M1_34320 PF00672 HAMP domain K01M1_34320 PF00512 His Kinase A (phospho-acceptor) domain K01M1_34320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K01M1_34350 PF00923 Transaldolase/Fructose-6-phosphate aldolase K01M1_34360 PF04055 Radical SAM superfamily K01M1_34410 PF08000 Bacterial PH domain K01M1_34440 PF13677 Membrane MotB of proton-channel complex MotA/MotB K01M1_34440 PF00691 OmpA family K01M1_34450 PF01618 MotA/TolQ/ExbB proton channel family K01M1_34460 PF04545 Sigma-70, region 4 K01M1_34460 PF04542 Sigma-70 region 2 K01M1_34470 PF03748 Flagellar basal body-associated protein FliL K01M1_34500 PF02561 Flagellar protein FliS K01M1_34510 PF07195 Flagellar hook-associated protein 2 C-terminus K01M1_34510 PF02465 Flagellar hook-associated protein 2 N-terminus K01M1_34510 PF07196 Flagellin hook IN motif K01M1_34530 PF00669 Bacterial flagellin N-terminal helical region K01M1_34530 PF00700 Bacterial flagellin C-terminal helical region K01M1_34550 PF00771 FHIPEP family K01M1_34560 PF01312 FlhB HrpN YscU SpaS Family K01M1_34570 PF01311 Bacterial export proteins, family 1 K01M1_34580 PF01313 Bacterial export proteins, family 3 K01M1_34590 PF00813 FliP family K01M1_34600 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term K01M1_34630 PF00072 Response regulator receiver domain K01M1_34630 PF02954 Bacterial regulatory protein, Fis family K01M1_34630 PF00158 Sigma-54 interaction domain K01M1_34640 PF02049 Flagellar hook-basal body complex protein FliE K01M1_34650 PF01514 Secretory protein of YscJ/FliF family K01M1_34650 PF08345 Flagellar M-ring protein C-terminal K01M1_34660 PF01706 FliG C-terminal domain K01M1_34660 PF14841 FliG middle domain K01M1_34660 PF14842 FliG N-terminal domain K01M1_34680 PF18269 T3SS EscN ATPase C-terminal domain K01M1_34680 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain K01M1_34710 PF03466 LysR substrate binding domain K01M1_34710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K01M1_34770 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K01M1_34780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K01M1_34780 PF03466 LysR substrate binding domain K01M1_34820 PF00486 Transcriptional regulatory protein, C terminal K01M1_34820 PF00072 Response regulator receiver domain K01M1_34830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K01M1_34830 PF00512 His Kinase A (phospho-acceptor) domain K01M1_34830 PF13426 PAS domain K01M1_34830 PF00072 Response regulator receiver domain K01M1_34830 PF08448 PAS fold K01M1_34840 PF00080 Copper/zinc superoxide dismutase (SODC) K01M1_34870 PF13188 PAS domain K01M1_34870 PF03707 Bacterial signalling protein N terminal repeat K01M1_34870 PF00990 Diguanylate cyclase, GGDEF domain K01M1_34870 PF00563 EAL domain K01M1_34880 PF00155 Aminotransferase class I and II K01M1_34890 PF00107 Zinc-binding dehydrogenase K01M1_34890 PF08240 Alcohol dehydrogenase GroES-like domain K01M1_34950 PF00194 Eukaryotic-type carbonic anhydrase K01M1_34960 PF00924 Mechanosensitive ion channel K01M1_34980 PF01070 FMN-dependent dehydrogenase K01M1_34990 PF02652 L-lactate permease K01M1_35000 PF03466 LysR substrate binding domain K01M1_35000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K01M1_35010 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain K01M1_35010 PF00326 Prolyl oligopeptidase family K01M1_35020 PF08352 Oligopeptide/dipeptide transporter, C-terminal region K01M1_35020 PF00005 ABC transporter K01M1_35040 PF05362 Lon protease (S16) C-terminal proteolytic domain K01M1_35040 PF13654 AAA domain K01M1_35050 PF00672 HAMP domain K01M1_35050 PF12729 Four helix bundle sensory module for signal transduction K01M1_35050 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K01M1_35060 PF13609 Gram-negative porin K01M1_35070 PF12945 Flagellar protein YcgR K01M1_35070 PF07238 PilZ domain K01M1_35100 PF00583 Acetyltransferase (GNAT) family K01M1_35110 PF12838 4Fe-4S dicluster domain K01M1_35110 PF12800 4Fe-4S binding domain K01M1_35120 PF13237 4Fe-4S dicluster domain K01M1_35120 PF12801 4Fe-4S binding domain K01M1_35160 PF12558 ATP-binding cassette cobalt transporter K01M1_35160 PF00005 ABC transporter K01M1_35170 PF07155 ECF-type riboflavin transporter, S component K01M1_35180 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion K01M1_35180 PF00529 HlyD membrane-fusion protein of T1SS K01M1_35190 PF11742 Protein of unknown function (DUF3302) K01M1_35200 PF00990 Diguanylate cyclase, GGDEF domain K01M1_35230 PF01048 Phosphorylase superfamily K01M1_35240 PF08349 Protein of unknown function (DUF1722) K01M1_35250 PF13411 MerR HTH family regulatory protein K01M1_35260 PF03441 FAD binding domain of DNA photolyase K01M1_35260 PF00875 DNA photolyase K01M1_35270 PF17969 L,D-transpeptidase C-terminal domain K01M1_35270 PF01476 LysM domain K01M1_35270 PF03734 L,D-transpeptidase catalytic domain K01M1_35290 PF00270 DEAD/DEAH box helicase K01M1_35290 PF00271 Helicase conserved C-terminal domain K01M1_35300 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain K01M1_35300 PF00326 Prolyl oligopeptidase family K01M1_35310 PF07715 TonB-dependent Receptor Plug Domain K01M1_35310 PF00593 TonB dependent receptor K01M1_35350 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K01M1_35350 PF00672 HAMP domain K01M1_35360 PF12849 PBP superfamily domain K01M1_35370 PF00528 Binding-protein-dependent transport system inner membrane component K01M1_35380 PF00528 Binding-protein-dependent transport system inner membrane component K01M1_35390 PF00005 ABC transporter K01M1_35420 PF13519 von Willebrand factor type A domain K01M1_35430 PF13519 von Willebrand factor type A domain K01M1_35450 PF01882 Protein of unknown function DUF58 K01M1_35460 PF07726 ATPase family associated with various cellular activities (AAA) K01M1_35460 PF17863 AAA lid domain K01M1_35470 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K01M1_35470 PF00672 HAMP domain K01M1_35470 PF02743 Cache domain K01M1_35490 PF00196 Bacterial regulatory proteins, luxR family K01M1_35500 PF00196 Bacterial regulatory proteins, luxR family K01M1_35520 PF00005 ABC transporter K01M1_35520 PF00664 ABC transporter transmembrane region K01M1_35530 PF00529 HlyD membrane-fusion protein of T1SS K01M1_35550 PF01032 FecCD transport family K01M1_35560 PF01497 Periplasmic binding protein K01M1_35570 PF00005 ABC transporter K01M1_35580 PF07715 TonB-dependent Receptor Plug Domain K01M1_35580 PF00593 TonB dependent receptor K01M1_35590 PF00664 ABC transporter transmembrane region K01M1_35590 PF00005 ABC transporter K01M1_35600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K01M1_35600 PF00512 His Kinase A (phospho-acceptor) domain K01M1_35610 PF00072 Response regulator receiver domain K01M1_35610 PF00486 Transcriptional regulatory protein, C terminal K01M1_35620 PF02080 TrkA-C domain K01M1_35620 PF02254 TrkA-N domain K01M1_35630 PF02386 Cation transport protein K01M1_35640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K01M1_35640 PF03466 LysR substrate binding domain K01M1_35650 PF02028 BCCT, betaine/carnitine/choline family transporter K01M1_35660 PF00848 Ring hydroxylating alpha subunit (catalytic domain) K01M1_35660 PF00355 Rieske [2Fe-2S] domain K01M1_35680 PF07992 Pyridine nucleotide-disulphide oxidoreductase K01M1_35680 PF18113 Rubredoxin binding C-terminal domain K01M1_35690 PF01266 FAD dependent oxidoreductase K01M1_35710 PF00127 Copper binding proteins, plastocyanin/azurin family K01M1_35720 PF13419 Haloacid dehalogenase-like hydrolase K01M1_35740 PF00158 Sigma-54 interaction domain K01M1_35740 PF01590 GAF domain K01M1_35750 PF00301 Rubredoxin K01M1_35750 PF00753 Metallo-beta-lactamase superfamily K01M1_35750 PF00258 Flavodoxin K01M1_35760 PF07992 Pyridine nucleotide-disulphide oxidoreductase K01M1_35760 PF18113 Rubredoxin binding C-terminal domain K01M1_35780 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K01M1_35780 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase K01M1_35790 PF06628 Catalase-related immune-responsive K01M1_35790 PF00199 Catalase K01M1_35800 PF13417 Glutathione S-transferase, N-terminal domain K01M1_35810 PF00107 Zinc-binding dehydrogenase K01M1_35810 PF16884 N-terminal domain of oxidoreductase K01M1_35820 PF00440 Bacterial regulatory proteins, tetR family K01M1_35820 PF16925 Tetracyclin repressor-like, C-terminal domain K01M1_35890 PF13439 Glycosyltransferase Family 4 K01M1_35890 PF00534 Glycosyl transferases group 1 K01M1_35910 PF02706 Chain length determinant protein K01M1_35910 PF13807 G-rich domain on putative tyrosine kinase K01M1_35910 PF13614 AAA domain K01M1_35940 PF02397 Bacterial sugar transferase K01M1_35950 PF08402 TOBE domain K01M1_35950 PF00005 ABC transporter K01M1_35960 PF01547 Bacterial extracellular solute-binding protein K01M1_35970 PF00528 Binding-protein-dependent transport system inner membrane component K01M1_35970 PF14785 Maltose transport system permease protein MalF P2 domain K01M1_35980 PF00528 Binding-protein-dependent transport system inner membrane component K01M1_36040 PF05661 Protein of unknown function (DUF808) K01M1_36050 PF01979 Amidohydrolase family K01M1_36060 PF01679 Proteolipid membrane potential modulator K01M1_36070 PF03473 MOSC domain K01M1_36070 PF03476 MOSC N-terminal beta barrel domain K01M1_36070 PF03473 MOSC domain K01M1_36070 PF03476 MOSC N-terminal beta barrel domain K01M1_36070 PF00111 2Fe-2S iron-sulfur cluster binding domain K01M1_36070 PF00111 2Fe-2S iron-sulfur cluster binding domain K01M1_36080 PF02540 NAD synthase K01M1_36090 PF01467 Cytidylyltransferase-like K01M1_36170 PF00005 ABC transporter K01M1_36180 PF01032 FecCD transport family K01M1_36200 PF02472 Biopolymer transport protein ExbD/TolR K01M1_36210 PF01618 MotA/TolQ/ExbB proton channel family K01M1_36220 PF03544 Gram-negative bacterial TonB protein C-terminal K01M1_36230 PF04055 Radical SAM superfamily K01M1_36240 PF06228 Haem utilisation ChuX/HutX K01M1_36250 PF01243 Pyridoxamine 5'-phosphate oxidase K01M1_36270 PF01584 CheW-like domain K01M1_36270 PF00072 Response regulator receiver domain K01M1_36290 PF01554 MatE K01M1_36300 PF08352 Oligopeptide/dipeptide transporter, C-terminal region K01M1_36300 PF00005 ABC transporter K01M1_36310 PF00005 ABC transporter K01M1_36310 PF08352 Oligopeptide/dipeptide transporter, C-terminal region K01M1_36320 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle K01M1_36330 PF00528 Binding-protein-dependent transport system inner membrane component K01M1_36340 PF08220 DeoR-like helix-turn-helix domain K01M1_36340 PF00455 DeoR C terminal sensor domain K01M1_36350 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase K01M1_36350 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K01M1_36360 PF07005 Sugar-binding N-terminal domain K01M1_36360 PF17042 Nucleotide-binding C-terminal domain K01M1_36370 PF00596 Class II Aldolase and Adducin N-terminal domain K01M1_36380 PF01261 Xylose isomerase-like TIM barrel K01M1_36390 PF01370 NAD dependent epimerase/dehydratase family K01M1_36400 PF02447 GntP family permease K01M1_36410 PF02583 Metal-sensitive transcriptional repressor K01M1_36420 PF03824 High-affinity nickel-transport protein K01M1_36430 PF02743 Cache domain K01M1_36430 PF00672 HAMP domain K01M1_36430 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K01M1_36440 PF03466 LysR substrate binding domain K01M1_36440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K01M1_36450 PF17848 Acetyl-coA carboxylase zinc finger domain K01M1_36450 PF01039 Carboxyl transferase domain K01M1_36470 PF08453 Peptidase family M9 N-terminal K01M1_36470 PF01752 Collagenase K01M1_36470 PF04151 Bacterial pre-peptidase C-terminal domain K01M1_36490 PF02627 Carboxymuconolactone decarboxylase family K01M1_36500 PF13411 MerR HTH family regulatory protein K01M1_36510 PF00128 Alpha amylase, catalytic domain K01M1_36540 PF00999 Sodium/hydrogen exchanger family K01M1_36540 PF02254 TrkA-N domain K01M1_36550 PF02525 Flavodoxin-like fold K01M1_36560 PF00582 Universal stress protein family K01M1_36570 PF12848 ABC transporter K01M1_36570 PF16326 ABC transporter C-terminal domain K01M1_36570 PF00005 ABC transporter K01M1_36580 PF00326 Prolyl oligopeptidase family K01M1_36580 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain K01M1_36600 PF13533 Biotin-lipoyl like K01M1_36610 PF00873 AcrB/AcrD/AcrF family K01M1_36620 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) K01M1_36640 PF13302 Acetyltransferase (GNAT) domain K01M1_36660 PF00990 Diguanylate cyclase, GGDEF domain K01M1_36660 PF17151 Periplasmic sensor domain K01M1_36690 PF00873 AcrB/AcrD/AcrF family K01M1_36700 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion K01M1_36730 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region K01M1_36730 PF01568 Molydopterin dinucleotide binding domain K01M1_36730 PF00384 Molybdopterin oxidoreductase K01M1_36730 PF12838 4Fe-4S dicluster domain K01M1_36730 PF04879 Molybdopterin oxidoreductase Fe4S4 domain K01M1_36760 PF00005 ABC transporter K01M1_36780 PF01418 Helix-turn-helix domain, rpiR family K01M1_36780 PF01380 SIS domain K01M1_36780 PF02685 Glucokinase K01M1_36800 PF07969 Amidohydrolase family K01M1_36820 PF00474 Sodium:solute symporter family K01M1_36830 PF00294 pfkB family carbohydrate kinase K01M1_36840 PF01081 KDPG and KHG aldolase K01M1_36850 PF02838 Glycosyl hydrolase family 20, domain 2 K01M1_36850 PF00728 Glycosyl hydrolase family 20, catalytic domain K01M1_36860 PF10282 Lactonase, 7-bladed beta-propeller K01M1_36870 PF01042 Endoribonuclease L-PSP K01M1_36880 PF02567 Phenazine biosynthesis-like protein K01M1_36890 PF01161 Phosphatidylethanolamine-binding protein K01M1_36910 PF01758 Sodium Bile acid symporter family K01M1_36940 PF01638 HxlR-like helix-turn-helix K01M1_36990 PF03466 LysR substrate binding domain K01M1_36990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K01M1_37000 PF00248 Aldo/keto reductase family K01M1_37010 PF03928 Haem-degrading K01M1_37050 PF03222 Tryptophan/tyrosine permease family K01M1_37070 PF02743 Cache domain K01M1_37070 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K01M1_37070 PF00672 HAMP domain K01M1_37120 PF01551 Peptidase family M23 K01M1_37120 PF01476 LysM domain K01M1_37120 PF08525 Opacity-associated protein A N-terminal motif K01M1_37130 PF08447 PAS fold K01M1_37130 PF00990 Diguanylate cyclase, GGDEF domain K01M1_37130 PF08448 PAS fold K01M1_37130 PF00563 EAL domain K01M1_37140 PF03466 LysR substrate binding domain K01M1_37140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K01M1_37150 PF07690 Major Facilitator Superfamily K01M1_37180 PF00462 Glutaredoxin K01M1_37190 PF00892 EamA-like transporter family K01M1_37220 PF01557 Fumarylacetoacetate (FAA) hydrolase family K01M1_37260 PF01810 LysE type translocator K01M1_37280 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III K01M1_37280 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain K01M1_37280 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II K01M1_37280 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I K01M1_37290 PF02790 Cytochrome C oxidase subunit II, transmembrane domain K01M1_37290 PF00116 Cytochrome C oxidase subunit II, periplasmic domain K01M1_37300 PF00115 Cytochrome C and Quinol oxidase polypeptide I K01M1_37310 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 K01M1_37320 PF00510 Cytochrome c oxidase subunit III K01M1_37350 PF02628 Cytochrome oxidase assembly protein K01M1_37360 PF01040 UbiA prenyltransferase family K01M1_37370 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase K01M1_37370 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase K01M1_37390 PF05736 OprF membrane domain K01M1_37390 PF00691 OmpA family K01M1_37430 PF00313 'Cold-shock' DNA-binding domain K01M1_37440 PF03889 Alternative ribosome-rescue factor A K01M1_37450 PF00990 Diguanylate cyclase, GGDEF domain K01M1_37460 PF04545 Sigma-70, region 4 K01M1_37460 PF00140 Sigma-70 factor, region 1.2 K01M1_37460 PF04539 Sigma-70 region 3 K01M1_37460 PF04542 Sigma-70 region 2 K01M1_37480 PF00664 ABC transporter transmembrane region K01M1_37480 PF00005 ABC transporter K01M1_37490 PF00664 ABC transporter transmembrane region K01M1_37490 PF00005 ABC transporter K01M1_37500 PF02321 Outer membrane efflux protein K01M1_37510 PF00072 Response regulator receiver domain K01M1_37510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K01M1_37520 PF13533 Biotin-lipoyl like K01M1_37560 PF17200 Single Cache domain 2 K01M1_37560 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K01M1_37560 PF00672 HAMP domain K01M1_37580 PF00210 Ferritin-like domain K01M1_37600 PF07995 Glucose / Sorbosone dehydrogenase K01M1_37610 PF00465 Iron-containing alcohol dehydrogenase K01M1_37640 PF00892 EamA-like transporter family K01M1_37660 PF03466 LysR substrate binding domain K01M1_37660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K01M1_37680 PF13193 AMP-binding enzyme C-terminal domain K01M1_37680 PF00501 AMP-binding enzyme K01M1_37690 PF00351 Biopterin-dependent aromatic amino acid hydroxylase K01M1_37700 PF01329 Pterin 4 alpha carbinolamine dehydratase K01M1_37740 PF12843 Putative quorum-sensing-regulated virulence factor K01M1_37780 PF00271 Helicase conserved C-terminal domain K01M1_37780 PF00270 DEAD/DEAH box helicase K01M1_37790 PF09905 DNA-binding protein VF530 K01M1_37810 PF00291 Pyridoxal-phosphate dependent enzyme K01M1_37820 PF00313 'Cold-shock' DNA-binding domain K01M1_37840 PF01470 Pyroglutamyl peptidase K01M1_37860 PF07683 Cobalamin synthesis protein cobW C-terminal domain K01M1_37860 PF02492 CobW/HypB/UreG, nucleotide-binding domain K01M1_37870 PF00270 DEAD/DEAH box helicase K01M1_37870 PF00271 Helicase conserved C-terminal domain K01M1_37910 PF00563 EAL domain K01M1_37910 PF12792 CSS motif domain associated with EAL K01M1_37920 PF00005 ABC transporter K01M1_37930 PF00672 HAMP domain K01M1_37930 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K01M1_37930 PF12729 Four helix bundle sensory module for signal transduction K01M1_37960 PF12849 PBP superfamily domain K01M1_37980 PF12833 Helix-turn-helix domain K01M1_37990 PF00575 S1 RNA binding domain K01M1_37990 PF00773 RNB domain K01M1_37990 PF08206 Ribonuclease B OB domain K01M1_38000 PF03880 DbpA RNA binding domain K01M1_38000 PF00270 DEAD/DEAH box helicase K01M1_38000 PF00271 Helicase conserved C-terminal domain K01M1_38010 PF00871 Acetokinase family K01M1_38020 PF03466 LysR substrate binding domain K01M1_38020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K01M1_38030 PF12146 Serine aminopeptidase, S33 K01M1_38040 PF12146 Serine aminopeptidase, S33 K01M1_38070 PF01925 Sulfite exporter TauE/SafE K01M1_38100 PF01979 Amidohydrolase family K01M1_38110 PF00132 Bacterial transferase hexapeptide (six repeats) K01M1_38120 PF07683 Cobalamin synthesis protein cobW C-terminal domain K01M1_38120 PF02492 CobW/HypB/UreG, nucleotide-binding domain K01M1_38130 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family K01M1_38140 PF01551 Peptidase family M23 K01M1_38140 PF01476 LysM domain K01M1_38140 PF08525 Opacity-associated protein A N-terminal motif K01M1_38160 PF02492 CobW/HypB/UreG, nucleotide-binding domain K01M1_38160 PF07683 Cobalamin synthesis protein cobW C-terminal domain K01M1_38170 PF02492 CobW/HypB/UreG, nucleotide-binding domain K01M1_38170 PF07683 Cobalamin synthesis protein cobW C-terminal domain K01M1_38180 PF01258 Prokaryotic dksA/traR C4-type zinc finger K01M1_38190 PF01914 MarC family integral membrane protein K01M1_38210 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K01M1_38210 PF13426 PAS domain K01M1_38210 PF08447 PAS fold K01M1_38230 PF00682 HMGL-like K01M1_38240 PF00378 Enoyl-CoA hydratase/isomerase K01M1_38250 PF01039 Carboxyl transferase domain K01M1_38260 PF02771 Acyl-CoA dehydrogenase, N-terminal domain K01M1_38260 PF00441 Acyl-CoA dehydrogenase, C-terminal domain K01M1_38260 PF02770 Acyl-CoA dehydrogenase, middle domain K01M1_38270 PF09278 MerR, DNA binding K01M1_38270 PF00376 MerR family regulatory protein K01M1_38280 PF02803 Thiolase, C-terminal domain K01M1_38280 PF00108 Thiolase, N-terminal domain K01M1_38290 PF00171 Aldehyde dehydrogenase family K01M1_38310 PF00378 Enoyl-CoA hydratase/isomerase K01M1_38320 PF00378 Enoyl-CoA hydratase/isomerase K01M1_38330 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K01M1_38330 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase K01M1_38350 PF00116 Cytochrome C oxidase subunit II, periplasmic domain K01M1_38350 PF06481 COX Aromatic Rich Motif K01M1_38360 PF00115 Cytochrome C and Quinol oxidase polypeptide I K01M1_38370 PF00510 Cytochrome c oxidase subunit III K01M1_38390 PF01040 UbiA prenyltransferase family K01M1_38400 PF00724 NADH:flavin oxidoreductase / NADH oxidase family K01M1_38400 PF07992 Pyridine nucleotide-disulphide oxidoreductase K01M1_38430 PF00171 Aldehyde dehydrogenase family K01M1_38450 PF02028 BCCT, betaine/carnitine/choline family transporter K01M1_38510 PF00005 ABC transporter K01M1_38520 PF00497 Bacterial extracellular solute-binding proteins, family 3 K01M1_38530 PF00528 Binding-protein-dependent transport system inner membrane component K01M1_38540 PF00528 Binding-protein-dependent transport system inner membrane component K01M1_38560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K01M1_38560 PF03466 LysR substrate binding domain K01M1_38590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K01M1_38590 PF03466 LysR substrate binding domain K01M1_38610 PF00766 Electron transfer flavoprotein FAD-binding domain K01M1_38610 PF01012 Electron transfer flavoprotein domain K01M1_38620 PF02817 e3 binding domain K01M1_38620 PF00364 Biotin-requiring enzyme K01M1_38620 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) K01M1_38630 PF02780 Transketolase, C-terminal domain K01M1_38630 PF02779 Transketolase, pyrimidine binding domain K01M1_38640 PF00676 Dehydrogenase E1 component K01M1_38680 PF00012 Hsp70 protein K01M1_38690 PF04314 Copper chaperone PCu(A)C K01M1_38740 PF00486 Transcriptional regulatory protein, C terminal K01M1_38740 PF00072 Response regulator receiver domain K01M1_38780 PF00082 Subtilase family K01M1_38780 PF01483 Proprotein convertase P-domain K01M1_38800 PF07694 5TMR of 5TMR-LYT K01M1_38800 PF00990 Diguanylate cyclase, GGDEF domain K01M1_38820 PF03222 Tryptophan/tyrosine permease family K01M1_38840 PF01568 Molydopterin dinucleotide binding domain K01M1_38840 PF04879 Molybdopterin oxidoreductase Fe4S4 domain K01M1_38840 PF00384 Molybdopterin oxidoreductase K01M1_38850 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases K01M1_38850 PF14824 Sirohaem biosynthesis protein central K01M1_38850 PF10414 Sirohaem synthase dimerisation region K01M1_38860 PF00591 Glycosyl transferase family, a/b domain K01M1_38860 PF02885 Glycosyl transferase family, helical bundle domain K01M1_38870 PF01738 Dienelactone hydrolase family K01M1_38880 PF03861 ANTAR domain K01M1_38880 PF08376 Nitrate and nitrite sensing K01M1_38890 PF00005 ABC transporter K01M1_38900 PF00528 Binding-protein-dependent transport system inner membrane component K01M1_38910 PF00005 ABC transporter K01M1_38920 PF07992 Pyridine nucleotide-disulphide oxidoreductase K01M1_38920 PF18267 Rubredoxin NAD+ reductase C-terminal domain K01M1_38920 PF13806 Rieske-like [2Fe-2S] domain K01M1_38920 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain K01M1_38920 PF01077 Nitrite and sulphite reductase 4Fe-4S domain K01M1_38920 PF04324 BFD-like [2Fe-2S] binding domain K01M1_38980 PF00072 Response regulator receiver domain K01M1_38980 PF00211 Adenylate and Guanylate cyclase catalytic domain K01M1_39020 PF03793 PASTA domain K01M1_39020 PF00069 Protein kinase domain K01M1_39060 PF00691 OmpA family K01M1_39060 PF13677 Membrane MotB of proton-channel complex MotA/MotB K01M1_39180 PF07724 AAA domain (Cdc48 subfamily) K01M1_39180 PF17871 AAA lid domain K01M1_39180 PF10431 C-terminal, D2-small domain, of ClpB protein K01M1_39180 PF00004 ATPase family associated with various cellular activities (AAA) K01M1_39200 PF04717 Type VI secretion system, phage-baseplate injector K01M1_39200 PF16671 Actin cross-linking domain K01M1_39230 PF00149 Calcineurin-like phosphoesterase K01M1_39230 PF12320 Type 5 capsule protein repressor C-terminal domain K01M1_39240 PF13476 AAA domain K01M1_39260 PF08212 Lipocalin-like domain K01M1_39280 PF03606 C4-dicarboxylate anaerobic carrier K01M1_39300 PF01212 Beta-eliminating lyase K01M1_39320 PF17868 AAA lid domain K01M1_39320 PF12592 Protein of unknown function (DUF3763) K01M1_39320 PF07728 AAA domain (dynein-related subfamily) K01M1_39330 PF05762 VWA domain containing CoxE-like protein K01M1_39360 PF03466 LysR substrate binding domain K01M1_39360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K01M1_39370 PF09330 D-lactate dehydrogenase, membrane binding K01M1_39370 PF01565 FAD binding domain K01M1_39400 PF00842 Alanine racemase, C-terminal domain K01M1_39400 PF01168 Alanine racemase, N-terminal domain K01M1_39410 PF00672 HAMP domain K01M1_39410 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K01M1_39470 PF14579 Helix-hairpin-helix motif K01M1_39470 PF00929 Exonuclease K01M1_39470 PF07733 Bacterial DNA polymerase III alpha NTPase domain K01M1_39470 PF17657 Bacterial DNA polymerase III alpha subunit finger domain K01M1_39470 PF02811 PHP domain K01M1_39560 PF02511 Thymidylate synthase complementing protein K01M1_39570 PF13597 Anaerobic ribonucleoside-triphosphate reductase K01M1_39570 PF03477 ATP cone domain K01M1_39960 PF09154 Domain of unknown function (DUF1939) K01M1_39960 PF00128 Alpha amylase, catalytic domain K01M1_40020 PF00296 Luciferase-like monooxygenase K01M1_40030 PF00990 Diguanylate cyclase, GGDEF domain K01M1_40030 PF00563 EAL domain K01M1_40030 PF03707 Bacterial signalling protein N terminal repeat K01M1_40050 PF03707 Bacterial signalling protein N terminal repeat K01M1_40050 PF00990 Diguanylate cyclase, GGDEF domain K01M1_40050 PF00563 EAL domain K01M1_40060 PF01272 Transcription elongation factor, GreA/GreB, C-term K01M1_40060 PF14760 Rnk N-terminus K01M1_40080 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain K01M1_40080 PF01077 Nitrite and sulphite reductase 4Fe-4S domain K01M1_40080 PF04324 BFD-like [2Fe-2S] binding domain K01M1_40080 PF07992 Pyridine nucleotide-disulphide oxidoreductase K01M1_40080 PF18267 Rubredoxin NAD+ reductase C-terminal domain K01M1_40090 PF13806 Rieske-like [2Fe-2S] domain K01M1_40100 PF01226 Formate/nitrite transporter K01M1_40110 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases K01M1_40110 PF14824 Sirohaem biosynthesis protein central K01M1_40110 PF10414 Sirohaem synthase dimerisation region K01M1_40140 PF03605 Anaerobic c4-dicarboxylate membrane transporter K01M1_40160 PF00593 TonB dependent receptor K01M1_40160 PF07715 TonB-dependent Receptor Plug Domain K01M1_40180 PF13302 Acetyltransferase (GNAT) domain K01M1_40190 PF11756 Nitrous oxide-stimulated promoter K01M1_40200 PF07690 Major Facilitator Superfamily K01M1_40210 PF00085 Thioredoxin K01M1_40220 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal K01M1_40220 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III K01M1_40260 PF01238 Phosphomannose isomerase type I K01M1_40270 PF07690 Major Facilitator Superfamily K01M1_40280 PF07730 Histidine kinase K01M1_40280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K01M1_40280 PF05231 MASE1 K01M1_40290 PF00072 Response regulator receiver domain K01M1_40290 PF00196 Bacterial regulatory proteins, luxR family K01M1_40300 PF07690 Major Facilitator Superfamily K01M1_40310 PF02634 FdhD/NarQ family K01M1_40320 PF03466 LysR substrate binding domain K01M1_40320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K01M1_40330 PF00384 Molybdopterin oxidoreductase K01M1_40360 PF02567 Phenazine biosynthesis-like protein K01M1_40370 PF01177 Asp/Glu/Hydantoin racemase K01M1_40380 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K01M1_40380 PF07992 Pyridine nucleotide-disulphide oxidoreductase K01M1_40400 PF04143 Sulphur transport K01M1_40430 PF13597 Anaerobic ribonucleoside-triphosphate reductase K01M1_40430 PF03477 ATP cone domain K01M1_40450 PF01554 MatE K01M1_40460 PF12852 Cupin K01M1_40460 PF12833 Helix-turn-helix domain K01M1_40470 PF00155 Aminotransferase class I and II K01M1_40480 PF18030 RimK PreATP-grasp domain K01M1_40480 PF08443 RimK-like ATP-grasp domain K01M1_40500 PF04076 Bacterial OB fold (BOF) protein K01M1_40510 PF07685 CobB/CobQ-like glutamine amidotransferase domain K01M1_40510 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain K01M1_40530 PF00528 Binding-protein-dependent transport system inner membrane component K01M1_40540 PF00005 ABC transporter K01M1_40540 PF03459 TOBE domain K01M1_40560 PF00563 EAL domain K01M1_40560 PF01590 GAF domain K01M1_40560 PF00990 Diguanylate cyclase, GGDEF domain K01M1_40560 PF00360 Phytochrome region K01M1_40570 PF00072 Response regulator receiver domain K01M1_40570 PF00990 Diguanylate cyclase, GGDEF domain K01M1_40600 PF01262 Alanine dehydrogenase/PNT, C-terminal domain K01M1_40600 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch K01M1_40600 PF05222 Alanine dehydrogenase/PNT, N-terminal domain K01M1_40610 PF02233 NAD(P) transhydrogenase beta subunit K01M1_40630 PF00072 Response regulator receiver domain K01M1_40630 PF00486 Transcriptional regulatory protein, C terminal K01M1_40660 PF03701 Uncharacterised protein family (UPF0181) K01M1_40670 PF00582 Universal stress protein family K01M1_40690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K01M1_40690 PF03466 LysR substrate binding domain K01M1_40990 PF01253 Translation initiation factor SUI1 K01M1_41010 PF07478 D-ala D-ala ligase C-terminus K01M1_41010 PF01820 D-ala D-ala ligase N-terminus K01M1_41020 PF05036 Sporulation related domain K01M1_41030 PF00583 Acetyltransferase (GNAT) family K01M1_41030 PF13380 CoA binding domain K01M1_41030 PF13607 Succinyl-CoA ligase like flavodoxin domain K01M1_41040 PF03466 LysR substrate binding domain K01M1_41040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K01M1_41050 PF00593 TonB dependent receptor K01M1_41050 PF07715 TonB-dependent Receptor Plug Domain K01M1_41050 PF04886 PT repeat K01M1_41060 PF16363 GDP-mannose 4,6 dehydratase K01M1_41070 PF05231 MASE1 K01M1_41070 PF00990 Diguanylate cyclase, GGDEF domain K01M1_41070 PF13426 PAS domain K01M1_41070 PF00563 EAL domain K01M1_41070 PF08448 PAS fold K01M1_41070 PF08447 PAS fold K01M1_41080 PF03746 LamB/YcsF family K01M1_41090 PF02682 Carboxyltransferase domain, subdomain C and D K01M1_41100 PF02626 Carboxyltransferase domain, subdomain A and B K01M1_41130 PF00005 ABC transporter K01M1_41140 PF13472 GDSL-like Lipase/Acylhydrolase family K01M1_41150 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase K01M1_41150 PF07055 Enoyl reductase FAD binding domain K01M1_41150 PF12241 Trans-2-enoyl-CoA reductase catalytic region K01M1_41160 PF00990 Diguanylate cyclase, GGDEF domain K01M1_41160 PF03707 Bacterial signalling protein N terminal repeat K01M1_41160 PF00563 EAL domain K01M1_41160 PF13188 PAS domain K01M1_41180 PF01556 DnaJ C terminal domain K01M1_41180 PF00226 DnaJ domain K01M1_41180 PF00684 DnaJ central domain K01M1_41230 PF12793 Sugar transport-related sRNA regulator N-term K01M1_41230 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle K01M1_41250 PF03061 Thioesterase superfamily K01M1_41280 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) K01M1_41290 PF12262 Bacterial virulence factor lipase N-terminal K01M1_41330 PF03741 Integral membrane protein TerC family K01M1_41340 PF02872 5'-nucleotidase, C-terminal domain K01M1_41340 PF00149 Calcineurin-like phosphoesterase K01M1_41350 PF11398 Protein of unknown function (DUF2813) K01M1_41360 PF06496 Protein of unknown function (DUF1097) K01M1_41370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K01M1_41370 PF03466 LysR substrate binding domain K01M1_41390 PF01226 Formate/nitrite transporter K01M1_41400 PF04264 YceI-like domain K01M1_41410 PF01292 Prokaryotic cytochrome b561 K01M1_41450 PF00270 DEAD/DEAH box helicase K01M1_41450 PF00271 Helicase conserved C-terminal domain K01M1_41460 PF04336 Acyl carrier protein phosphodiesterase K01M1_41480 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K01M1_41480 PF00672 HAMP domain K01M1_41480 PF12729 Four helix bundle sensory module for signal transduction K01M1_41490 PF13419 Haloacid dehalogenase-like hydrolase K01M1_41520 PF00294 pfkB family carbohydrate kinase K01M1_41530 PF01268 Formate--tetrahydrofolate ligase K01M1_41540 PF00483 Nucleotidyl transferase K01M1_41550 PF00704 Glycosyl hydrolases family 18 K01M1_41550 PF06483 Chitinase C K01M1_41560 PF06719 AraC-type transcriptional regulator N-terminus K01M1_41560 PF12833 Helix-turn-helix domain K01M1_41570 PF00465 Iron-containing alcohol dehydrogenase K01M1_41590 PF00005 ABC transporter K01M1_41600 PF00528 Binding-protein-dependent transport system inner membrane component K01M1_41610 PF00497 Bacterial extracellular solute-binding proteins, family 3 K01M1_41620 PF00528 Binding-protein-dependent transport system inner membrane component K01M1_41630 PF00563 EAL domain K01M1_41630 PF01590 GAF domain K01M1_41630 PF00990 Diguanylate cyclase, GGDEF domain K01M1_41630 PF00989 PAS fold K01M1_41660 PF00356 Bacterial regulatory proteins, lacI family K01M1_41660 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family K01M1_41670 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K01M1_41670 PF00381 PTS HPr component phosphorylation site K01M1_41680 PF00294 pfkB family carbohydrate kinase K01M1_41690 PF02378 Phosphotransferase system, EIIC K01M1_41690 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit K01M1_41710 PF00873 AcrB/AcrD/AcrF family K01M1_41750 PF01571 Aminomethyltransferase folate-binding domain K01M1_41750 PF08669 Glycine cleavage T-protein C-terminal barrel domain K01M1_41770 PF00464 Serine hydroxymethyltransferase K01M1_41780 PF01597 Glycine cleavage H-protein K01M1_41790 PF02347 Glycine cleavage system P-protein K01M1_41800 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K01M1_41810 PF00753 Metallo-beta-lactamase superfamily K01M1_41810 PF16123 Hydroxyacylglutathione hydrolase C-terminus K01M1_41820 PF03466 LysR substrate binding domain K01M1_41820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K01M1_41830 PF00892 EamA-like transporter family K01M1_41840 PF02627 Carboxymuconolactone decarboxylase family K01M1_41850 PF12833 Helix-turn-helix domain K01M1_41900 PF14579 Helix-hairpin-helix motif K01M1_41900 PF17657 Bacterial DNA polymerase III alpha subunit finger domain K01M1_41900 PF07733 Bacterial DNA polymerase III alpha NTPase domain K01M1_41900 PF11490 DNA polymerase III polC-type N-terminus II K01M1_41900 PF00929 Exonuclease K01M1_41900 PF02811 PHP domain K01M1_41910 PF00005 ABC transporter K01M1_41910 PF00664 ABC transporter transmembrane region K01M1_41950 PF02253 Phospholipase A1 K01M1_41970 PF09278 MerR, DNA binding K01M1_41970 PF00376 MerR family regulatory protein K01M1_41980 PF01327 Polypeptide deformylase K01M1_42040 PF03448 MgtE intracellular N domain K01M1_42040 PF01769 Divalent cation transporter K01M1_42040 PF00571 CBS domain K01M1_42080 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K01M1_42090 PF00724 NADH:flavin oxidoreductase / NADH oxidase family K01M1_42110 PF01757 Acyltransferase family K01M1_42140 PF00141 Peroxidase K01M1_42150 PF01645 Conserved region in glutamate synthase K01M1_42150 PF13187 4Fe-4S dicluster domain K01M1_42170 PF00171 Aldehyde dehydrogenase family K01M1_42200 PF00892 EamA-like transporter family K01M1_42210 PF00893 Small Multidrug Resistance protein K01M1_42250 PF00892 EamA-like transporter family K01M1_42270 PF07963 Prokaryotic N-terminal methylation motif K01M1_42270 PF08334 Type II secretion system (T2SS), protein G K01M1_42280 PF01584 CheW-like domain K01M1_42280 PF00072 Response regulator receiver domain K01M1_42290 PF00072 Response regulator receiver domain K01M1_42290 PF00196 Bacterial regulatory proteins, luxR family K01M1_42310 PF00990 Diguanylate cyclase, GGDEF domain K01M1_42320 PF00072 Response regulator receiver domain K01M1_42320 PF00196 Bacterial regulatory proteins, luxR family K01M1_42330 PF00563 EAL domain K01M1_42330 PF13188 PAS domain K01M1_42330 PF00990 Diguanylate cyclase, GGDEF domain K01M1_42330 PF03707 Bacterial signalling protein N terminal repeat K01M1_42340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K01M1_42340 PF00512 His Kinase A (phospho-acceptor) domain K01M1_42340 PF09456 RcsC Alpha-Beta-Loop (ABL) K01M1_42340 PF00072 Response regulator receiver domain K01M1_42350 PF01926 50S ribosome-binding GTPase K01M1_42360 PF00155 Aminotransferase class I and II K01M1_42370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K01M1_42370 PF00072 Response regulator receiver domain K01M1_42390 PF00814 Glycoprotease family K01M1_42390 PF00583 Acetyltransferase (GNAT) family K01M1_42410 PF03606 C4-dicarboxylate anaerobic carrier K01M1_42440 PF08774 VRR-NUC domain K01M1_42440 PF18081 Fanconi anemia-associated nuclease SAP domain K01M1_42460 PF04076 Bacterial OB fold (BOF) protein K01M1_42470 PF00781 Diacylglycerol kinase catalytic domain K01M1_42480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K01M1_42480 PF03466 LysR substrate binding domain K01M1_42490 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region K01M1_42520 PF00092 von Willebrand factor type A domain K01M1_42550 PF07726 ATPase family associated with various cellular activities (AAA) K01M1_42550 PF17863 AAA lid domain K01M1_42560 PF04055 Radical SAM superfamily K01M1_42560 PF13186 Iron-sulfur cluster-binding domain K01M1_42570 PF00884 Sulfatase K01M1_42570 PF16385 Domain of unknown function K01M1_42580 PF03466 LysR substrate binding domain K01M1_42580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K01M1_42590 PF00884 Sulfatase K01M1_42600 PF00072 Response regulator receiver domain K01M1_42600 PF00486 Transcriptional regulatory protein, C terminal K01M1_42630 PF00072 Response regulator receiver domain K01M1_42630 PF01627 Hpt domain K01M1_42630 PF00512 His Kinase A (phospho-acceptor) domain K01M1_42630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K01M1_42630 PF00672 HAMP domain K01M1_42640 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family K01M1_42650 PF02142 MGS-like domain K01M1_42660 PF13361 UvrD-like helicase C-terminal domain K01M1_42660 PF00580 UvrD/REP helicase N-terminal domain K01M1_42660 PF12462 DNA helicase IV / RNA helicase N terminal K01M1_42670 PF12805 FUSC-like inner membrane protein yccS K01M1_42730 PF07715 TonB-dependent Receptor Plug Domain K01M1_42730 PF00593 TonB dependent receptor K01M1_42750 PF13411 MerR HTH family regulatory protein K01M1_42760 PF00005 ABC transporter K01M1_42770 PF01032 FecCD transport family K01M1_42780 PF01032 FecCD transport family K01M1_42790 PF01497 Periplasmic binding protein K01M1_42810 PF01048 Phosphorylase superfamily K01M1_42820 PF04973 Nicotinamide mononucleotide transporter K01M1_42840 PF00356 Bacterial regulatory proteins, lacI family K01M1_42850 PF00294 pfkB family carbohydrate kinase K01M1_42860 PF13407 Periplasmic binding protein domain K01M1_42870 PF02653 Branched-chain amino acid transport system / permease component K01M1_42880 PF00005 ABC transporter K01M1_42890 PF05025 RbsD / FucU transport protein family K01M1_42900 PF00990 Diguanylate cyclase, GGDEF domain K01M1_42900 PF00563 EAL domain K01M1_42980 PF04116 Fatty acid hydroxylase superfamily K01M1_43000 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase K01M1_43000 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain K01M1_43020 PF00072 Response regulator receiver domain K01M1_43020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K01M1_43020 PF09308 LuxQ, periplasmic K01M1_43020 PF00512 His Kinase A (phospho-acceptor) domain K01M1_43030 PF03150 Di-haem cytochrome c peroxidase K01M1_43030 PF00034 Cytochrome c K01M1_43050 PF01145 SPFH domain / Band 7 family K01M1_43050 PF16200 C-terminal region of band_7 K01M1_43070 PF00881 Nitroreductase family K01M1_43080 PF00005 ABC transporter K01M1_43080 PF00571 CBS domain K01M1_43090 PF00528 Binding-protein-dependent transport system inner membrane component K01M1_43100 PF04069 Substrate binding domain of ABC-type glycine betaine transport system K01M1_43110 PF00732 GMC oxidoreductase K01M1_43110 PF05199 GMC oxidoreductase K01M1_43120 PF00171 Aldehyde dehydrogenase family K01M1_43130 PF13977 BetI-type transcriptional repressor, C-terminal K01M1_43130 PF00440 Bacterial regulatory proteins, tetR family K01M1_43140 PF00990 Diguanylate cyclase, GGDEF domain K01M1_43140 PF00072 Response regulator receiver domain K01M1_43160 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K01M1_43160 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase K01M1_43180 PF00378 Enoyl-CoA hydratase/isomerase K01M1_43190 PF02771 Acyl-CoA dehydrogenase, N-terminal domain K01M1_43190 PF02770 Acyl-CoA dehydrogenase, middle domain K01M1_43190 PF00441 Acyl-CoA dehydrogenase, C-terminal domain K01M1_43200 PF00171 Aldehyde dehydrogenase family K01M1_43210 PF02803 Thiolase, C-terminal domain K01M1_43210 PF00108 Thiolase, N-terminal domain K01M1_43220 PF00376 MerR family regulatory protein K01M1_43220 PF09278 MerR, DNA binding K01M1_43230 PF02770 Acyl-CoA dehydrogenase, middle domain K01M1_43230 PF00441 Acyl-CoA dehydrogenase, C-terminal domain K01M1_43230 PF02771 Acyl-CoA dehydrogenase, N-terminal domain K01M1_43240 PF01039 Carboxyl transferase domain K01M1_43250 PF00378 Enoyl-CoA hydratase/isomerase K01M1_43260 PF00364 Biotin-requiring enzyme K01M1_43260 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain K01M1_43260 PF02785 Biotin carboxylase C-terminal domain K01M1_43260 PF00289 Biotin carboxylase, N-terminal domain K01M1_43270 PF00682 HMGL-like K01M1_43290 PF12794 Mechanosensitive ion channel inner membrane domain 1 K01M1_43290 PF12795 Mechanosensitive ion channel porin domain K01M1_43290 PF00924 Mechanosensitive ion channel K01M1_43300 PF14602 Hexapeptide repeat of succinyl-transferase K01M1_43300 PF12464 Maltose acetyltransferase K01M1_43310 PF00392 Bacterial regulatory proteins, gntR family K01M1_43310 PF00155 Aminotransferase class I and II K01M1_43320 PF01654 Cytochrome bd terminal oxidase subunit I K01M1_43330 PF02322 Cytochrome bd terminal oxidase subunit II K01M1_43350 PF02567 Phenazine biosynthesis-like protein K01M1_43370 PF13087 AAA domain K01M1_43370 PF13195 Protein of unknown function (DUF4011) K01M1_43370 PF13086 AAA domain K01M1_43370 PF13087 AAA domain K01M1_43370 PF13195 Protein of unknown function (DUF4011) K01M1_43370 PF13086 AAA domain K01M1_43380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K01M1_43380 PF03466 LysR substrate binding domain K01M1_43390 PF03306 Alpha-acetolactate decarboxylase K01M1_43400 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K01M1_43400 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain K01M1_43400 PF00205 Thiamine pyrophosphate enzyme, central domain K01M1_43420 PF05724 Thiopurine S-methyltransferase (TPMT) K01M1_43430 PF14535 AMP-binding enzyme C-terminal domain K01M1_43430 PF00501 AMP-binding enzyme K01M1_43440 PF00005 ABC transporter K01M1_43480 PF00501 AMP-binding enzyme K01M1_43490 PF12399 Branched-chain amino acid ATP-binding cassette transporter K01M1_43490 PF00005 ABC transporter K01M1_43510 PF01012 Electron transfer flavoprotein domain K01M1_43520 PF01012 Electron transfer flavoprotein domain K01M1_43520 PF00766 Electron transfer flavoprotein FAD-binding domain K01M1_43530 PF13193 AMP-binding enzyme C-terminal domain K01M1_43530 PF00501 AMP-binding enzyme K01M1_43540 PF02378 Phosphotransferase system, EIIC K01M1_43540 PF00367 phosphotransferase system, EIIB K01M1_43550 PF11975 Family 4 glycosyl hydrolase C-terminal domain K01M1_43550 PF02056 Family 4 glycosyl hydrolase K01M1_43560 PF07702 UTRA domain K01M1_43560 PF00392 Bacterial regulatory proteins, gntR family K01M1_43570 PF03334 Na+/H+ antiporter subunit K01M1_43580 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) K01M1_43610 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L K01M1_43620 PF00361 Proton-conducting membrane transporter K01M1_43620 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter K01M1_43620 PF13244 Domain of unknown function (DUF4040) K01M1_43620 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus K01M1_43640 PF00582 Universal stress protein family K01M1_43650 PF00106 short chain dehydrogenase K01M1_43660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K01M1_43660 PF03466 LysR substrate binding domain K01M1_43680 PF07690 Major Facilitator Superfamily K01M1_43810 PF01037 Lrp/AsnC ligand binding domain K01M1_43880 PF00069 Protein kinase domain K01M1_43930 PF04717 Type VI secretion system, phage-baseplate injector K01M1_43940 PF05638 Type VI secretion system effector, Hcp K01M1_43950 PF10431 C-terminal, D2-small domain, of ClpB protein K01M1_43950 PF00004 ATPase family associated with various cellular activities (AAA) K01M1_43950 PF07724 AAA domain (Cdc48 subfamily) K01M1_43950 PF17871 AAA lid domain K01M1_43960 PF00158 Sigma-54 interaction domain K01M1_43960 PF02954 Bacterial regulatory protein, Fis family K01M1_44010 PF01476 LysM domain K01M1_44010 PF08525 Opacity-associated protein A N-terminal motif K01M1_44010 PF01551 Peptidase family M23 K01M1_44020 PF00132 Bacterial transferase hexapeptide (six repeats) K01M1_44030 PF00144 Beta-lactamase K01M1_44040 PF00392 Bacterial regulatory proteins, gntR family K01M1_44070 PF02911 Formyl transferase, C-terminal domain K01M1_44070 PF00551 Formyl transferase K01M1_44070 PF01370 NAD dependent epimerase/dehydratase family K01M1_44120 PF01565 FAD binding domain K01M1_44120 PF08031 Berberine and berberine like K01M1_44140 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family K01M1_44150 PF00478 IMP dehydrogenase / GMP reductase domain K01M1_44160 PF03853 YjeF-related protein N-terminus K01M1_44160 PF01256 Carbohydrate kinase K01M1_44180 PF00072 Response regulator receiver domain K01M1_44190 PF00248 Aldo/keto reductase family K01M1_44220 PF00654 Voltage gated chloride channel K01M1_44240 PF01227 GTP cyclohydrolase I K01M1_44250 PF03453 MoeA N-terminal region (domain I and II) K01M1_44250 PF03454 MoeA C-terminal region (domain IV) K01M1_44250 PF00994 Probable molybdopterin binding domain K01M1_44260 PF00899 ThiF family K01M1_44290 PF00581 Rhodanese-like domain K01M1_44310 PF00923 Transaldolase/Fructose-6-phosphate aldolase K01M1_44320 PF00456 Transketolase, thiamine diphosphate binding domain K01M1_44320 PF02779 Transketolase, pyrimidine binding domain K01M1_44320 PF02780 Transketolase, C-terminal domain K01M1_44330 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K01M1_44330 PF08447 PAS fold K01M1_44340 PF07690 Major Facilitator Superfamily K01M1_44350 PF00793 DAHP synthetase I family K01M1_44360 PF00691 OmpA family K01M1_44360 PF01389 OmpA-like transmembrane domain K01M1_44370 PF13419 Haloacid dehalogenase-like hydrolase K01M1_44380 PF00472 RF-1 domain K01M1_44390 PF12729 Four helix bundle sensory module for signal transduction K01M1_44390 PF00672 HAMP domain K01M1_44390 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K01M1_44400 PF00873 AcrB/AcrD/AcrF family K01M1_44410 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion K01M1_44420 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region K01M1_44430 PF07687 Peptidase dimerisation domain K01M1_44430 PF01546 Peptidase family M20/M25/M40 K01M1_44460 PF00072 Response regulator receiver domain K01M1_44460 PF00196 Bacterial regulatory proteins, luxR family K01M1_44470 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term K01M1_44470 PF07730 Histidine kinase K01M1_44470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K01M1_44470 PF00672 HAMP domain K01M1_44480 PF12838 4Fe-4S dicluster domain K01M1_44480 PF13187 4Fe-4S dicluster domain K01M1_44500 PF04879 Molybdopterin oxidoreductase Fe4S4 domain K01M1_44500 PF01568 Molydopterin dinucleotide binding domain K01M1_44500 PF00384 Molybdopterin oxidoreductase K01M1_44510 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) K01M1_44520 PF03264 NapC/NirT cytochrome c family, N-terminal region K01M1_44540 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus K01M1_44560 PF02803 Thiolase, C-terminal domain K01M1_44560 PF00108 Thiolase, N-terminal domain K01M1_44570 PF00106 short chain dehydrogenase K01M1_44580 PF01810 LysE type translocator K01M1_44600 PF07549 SecD/SecF GG Motif K01M1_44600 PF02355 Protein export membrane protein K01M1_44610 PF02355 Protein export membrane protein K01M1_44610 PF13721 SecD export protein N-terminal TM region K01M1_44610 PF07549 SecD/SecF GG Motif K01M1_44660 PF01037 Lrp/AsnC ligand binding domain K01M1_44700 PF00529 HlyD membrane-fusion protein of T1SS K01M1_44700 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion K01M1_44710 PF01047 MarR family K01M1_44720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K01M1_44720 PF09308 LuxQ, periplasmic K01M1_44720 PF00072 Response regulator receiver domain K01M1_44720 PF00512 His Kinase A (phospho-acceptor) domain K01M1_44730 PF13407 Periplasmic binding protein domain K01M1_44740 PF01541 GIY-YIG catalytic domain K01M1_44750 PF04337 Protein of unknown function, DUF480 K01M1_44770 PF04363 Protein of unknown function (DUF496) K01M1_44780 PF01554 MatE K01M1_44790 PF00672 HAMP domain K01M1_44790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K01M1_44790 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) K01M1_44790 PF00072 Response regulator receiver domain K01M1_44790 PF00512 His Kinase A (phospho-acceptor) domain K01M1_44790 PF01627 Hpt domain K01M1_44800 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain K01M1_44800 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain K01M1_44850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K01M1_44850 PF03466 LysR substrate binding domain K01M1_44870 PF13520 Amino acid permease K01M1_44880 PF00155 Aminotransferase class I and II K01M1_44880 PF00392 Bacterial regulatory proteins, gntR family K01M1_44900 PF00672 HAMP domain K01M1_44900 PF16527 Two-component sensor protein CpxA, periplasmic domain K01M1_44900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K01M1_44900 PF00512 His Kinase A (phospho-acceptor) domain K01M1_44910 PF00072 Response regulator receiver domain K01M1_44910 PF00486 Transcriptional regulatory protein, C terminal K01M1_44940 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term K01M1_44940 PF12833 Helix-turn-helix domain K01M1_44960 PF00529 HlyD membrane-fusion protein of T1SS K01M1_44960 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion K01M1_44970 PF03109 ABC1 family K01M1_44980 PF01769 Divalent cation transporter K01M1_44980 PF00571 CBS domain K01M1_44980 PF03448 MgtE intracellular N domain K01M1_44990 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin K01M1_45000 PF07969 Amidohydrolase family K01M1_45010 PF01966 HD domain K01M1_45030 PF07690 Major Facilitator Superfamily K01M1_45050 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase K01M1_45060 PF00255 Glutathione peroxidase K01M1_45090 PF01323 DSBA-like thioredoxin domain K01M1_45120 PF00072 Response regulator receiver domain K01M1_45120 PF00486 Transcriptional regulatory protein, C terminal K01M1_45130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K01M1_45130 PF00672 HAMP domain K01M1_45130 PF16527 Two-component sensor protein CpxA, periplasmic domain K01M1_45130 PF00512 His Kinase A (phospho-acceptor) domain K01M1_45150 PF01219 Prokaryotic diacylglycerol kinase K01M1_45160 PF08019 Phosphoethanolamine transferase EptA/EptB K01M1_45160 PF00884 Sulfatase K01M1_45170 PF01408 Oxidoreductase family, NAD-binding Rossmann fold K01M1_45200 PF01734 Patatin-like phospholipase K01M1_45210 PF05726 Pirin C-terminal cupin domain K01M1_45210 PF02678 Pirin K01M1_45220 PF00313 'Cold-shock' DNA-binding domain K01M1_45250 PF00962 Adenosine/AMP deaminase K01M1_45260 PF08534 Redoxin K01M1_45260 PF00462 Glutaredoxin K01M1_45280 PF00768 D-alanyl-D-alanine carboxypeptidase K01M1_45280 PF07943 Penicillin-binding protein 5, C-terminal domain K01M1_45300 PF02798 Glutathione S-transferase, N-terminal domain K01M1_45310 PF00251 Glycosyl hydrolases family 32 N-terminal domain K01M1_45310 PF08244 Glycosyl hydrolases family 32 C terminal K01M1_45320 PF00294 pfkB family carbohydrate kinase K01M1_45330 PF02378 Phosphotransferase system, EIIC K01M1_45330 PF00367 phosphotransferase system, EIIB K01M1_45340 PF00356 Bacterial regulatory proteins, lacI family K01M1_45350 PF11471 Maltoporin periplasmic N-terminal extension K01M1_45350 PF02264 LamB porin K01M1_45430 PF00106 short chain dehydrogenase K01M1_45440 PF03466 LysR substrate binding domain K01M1_45440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K01M1_45450 PF01497 Periplasmic binding protein K01M1_45450 PF12833 Helix-turn-helix domain K01M1_45460 PF00155 Aminotransferase class I and II K01M1_45500 PF00271 Helicase conserved C-terminal domain K01M1_45500 PF00270 DEAD/DEAH box helicase K01M1_45520 PF03466 LysR substrate binding domain K01M1_45520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K01M1_45530 PF03466 LysR substrate binding domain K01M1_45530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K01M1_45550 PF00724 NADH:flavin oxidoreductase / NADH oxidase family K01M1_45560 PF00107 Zinc-binding dehydrogenase K01M1_45560 PF08240 Alcohol dehydrogenase GroES-like domain K01M1_45600 PF00155 Aminotransferase class I and II K01M1_45600 PF00392 Bacterial regulatory proteins, gntR family K01M1_45610 PF00557 Metallopeptidase family M24 K01M1_45610 PF01321 Creatinase/Prolidase N-terminal domain K01M1_45620 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family K01M1_45630 PF01037 Lrp/AsnC ligand binding domain K01M1_45640 PF00171 Aldehyde dehydrogenase family K01M1_45650 PF00202 Aminotransferase class-III K01M1_45660 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) K01M1_45690 PF03466 LysR substrate binding domain K01M1_45690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K01M1_45710 PF17763 Glutaminase/Asparaginase C-terminal domain K01M1_45710 PF00710 Asparaginase, N-terminal K01M1_45720 PF03618 Kinase/pyrophosphorylase K01M1_45730 PF02896 PEP-utilising enzyme, TIM barrel domain K01M1_45730 PF00391 PEP-utilising enzyme, mobile domain K01M1_45730 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain K01M1_45750 PF00196 Bacterial regulatory proteins, luxR family K01M1_45750 PF00072 Response regulator receiver domain K01M1_45760 PF00579 tRNA synthetases class I (W and Y) K01M1_45770 PF13416 Bacterial extracellular solute-binding protein K01M1_45800 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 K01M1_45800 PF00703 Glycosyl hydrolases family 2 K01M1_45800 PF02836 Glycosyl hydrolases family 2, TIM barrel domain K01M1_45800 PF02837 Glycosyl hydrolases family 2, sugar binding domain K01M1_45810 PF02028 BCCT, betaine/carnitine/choline family transporter K01M1_45820 PF00392 Bacterial regulatory proteins, gntR family K01M1_45820 PF07702 UTRA domain K01M1_45870 PF00005 ABC transporter K01M1_45870 PF08402 TOBE domain K01M1_45910 PF00873 AcrB/AcrD/AcrF family K01M1_45950 PF00873 AcrB/AcrD/AcrF family K01M1_45970 PF13091 PLD-like domain K01M1_45980 PF00398 Ribosomal RNA adenine dimethylase K01M1_46020 PF00376 MerR family regulatory protein K01M1_46020 PF09278 MerR, DNA binding K01M1_46040 PF03466 LysR substrate binding domain K01M1_46040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K01M1_46060 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain K01M1_46060 PF13378 Enolase C-terminal domain-like K01M1_46070 PF03144 Elongation factor Tu domain 2 K01M1_46070 PF00009 Elongation factor Tu GTP binding domain K01M1_46070 PF03764 Elongation factor G, domain IV K01M1_46070 PF14492 Elongation Factor G, domain II K01M1_46070 PF00679 Elongation factor G C-terminus K01M1_46120 PF02001 Protein of unknown function DUF134 K01M1_46130 PF00528 Binding-protein-dependent transport system inner membrane component K01M1_46140 PF00005 ABC transporter K01M1_46140 PF00571 CBS domain K01M1_46150 PF17185 NlpE C-terminal OB domain K01M1_46150 PF04170 NlpE N-terminal domain K01M1_46160 PF06629 MltA-interacting protein MipA K01M1_46190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K01M1_46190 PF03466 LysR substrate binding domain K01M1_46240 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family K01M1_46240 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain K01M1_46260 PF00857 Isochorismatase family K01M1_46290 PF08220 DeoR-like helix-turn-helix domain K01M1_46290 PF00455 DeoR C terminal sensor domain K01M1_46300 PF01625 Peptide methionine sulfoxide reductase K01M1_46300 PF01641 SelR domain K01M1_46310 PF03060 Nitronate monooxygenase K01M1_46320 PF13520 Amino acid permease K01M1_46330 PF05985 Ethanolamine ammonia-lyase light chain (EutC) K01M1_46340 PF06751 Ethanolamine ammonia lyase large subunit (EutB) K01M1_46350 PF12833 Helix-turn-helix domain K01M1_46360 PF08359 YsiA-like protein, C-terminal region K01M1_46360 PF00440 Bacterial regulatory proteins, tetR family K01M1_46390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K01M1_46390 PF03466 LysR substrate binding domain K01M1_46400 PF01810 LysE type translocator K01M1_46420 PF00118 TCP-1/cpn60 chaperonin family K01M1_46430 PF00166 Chaperonin 10 Kd subunit K01M1_46440 PF00581 Rhodanese-like domain K01M1_46470 PF01070 FMN-dependent dehydrogenase K01M1_46510 PF00669 Bacterial flagellin N-terminal helical region K01M1_46520 PF00460 Flagella basal body rod protein K01M1_46520 PF06429 Flagellar basal body rod FlgEFG protein C-terminal K01M1_46530 PF10135 Rod binding protein K01M1_46530 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase K01M1_46540 PF02119 Flagellar P-ring protein K01M1_46550 PF02107 Flagellar L-ring protein K01M1_46560 PF00460 Flagella basal body rod protein K01M1_46560 PF06429 Flagellar basal body rod FlgEFG protein C-terminal K01M1_46570 PF00460 Flagella basal body rod protein K01M1_46570 PF06429 Flagellar basal body rod FlgEFG protein C-terminal K01M1_46580 PF07559 Flagellar basal body protein FlaE K01M1_46580 PF06429 Flagellar basal body rod FlgEFG protein C-terminal K01M1_46580 PF00460 Flagella basal body rod protein K01M1_46590 PF13861 FlgD Tudor-like domain K01M1_46590 PF13860 FlgD Ig-like domain K01M1_46590 PF03963 Flagellar hook capping protein - N-terminal region K01M1_46600 PF06429 Flagellar basal body rod FlgEFG protein C-terminal K01M1_46600 PF00460 Flagella basal body rod protein K01M1_46610 PF00460 Flagella basal body rod protein K01M1_46650 PF01464 Transglycosylase SLT domain K01M1_46660 PF00133 tRNA synthetases class I (I, L, M and V) K01M1_46660 PF08264 Anticodon-binding domain of tRNA K01M1_46700 PF03313 Serine dehydratase alpha chain K01M1_46700 PF03315 Serine dehydratase beta chain K01M1_46720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K01M1_46720 PF03466 LysR substrate binding domain K01M1_46730 PF03466 LysR substrate binding domain K01M1_46730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K01M1_46740 PF00691 OmpA family K01M1_46740 PF01389 OmpA-like transmembrane domain K01M1_46750 PF18027 Cytosolic carboxypeptidase N-terminal domain K01M1_46750 PF00246 Zinc carboxypeptidase K01M1_46760 PF01266 FAD dependent oxidoreductase K01M1_46780 PF04393 Protein of unknown function (DUF535) K01M1_46810 PF07702 UTRA domain K01M1_46810 PF00392 Bacterial regulatory proteins, gntR family K01M1_46820 PF00528 Binding-protein-dependent transport system inner membrane component K01M1_46830 PF00005 ABC transporter K01M1_46860 PF00266 Aminotransferase class-V K01M1_46880 PF13419 Haloacid dehalogenase-like hydrolase K01M1_46890 PF00356 Bacterial regulatory proteins, lacI family K01M1_46900 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K01M1_46920 PF03611 PTS system sugar-specific permease component K01M1_46950 PF00657 GDSL-like Lipase/Acylhydrolase K01M1_46960 PF00440 Bacterial regulatory proteins, tetR family K01M1_46980 PF02321 Outer membrane efflux protein K01M1_46990 PF12704 MacB-like periplasmic core domain K01M1_46990 PF02687 FtsX-like permease family K01M1_46990 PF00005 ABC transporter K01M1_47000 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion K01M1_47010 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) K01M1_47020 PF00194 Eukaryotic-type carbonic anhydrase K01M1_47030 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) K01M1_47060 PF13419 Haloacid dehalogenase-like hydrolase K01M1_47070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K01M1_47070 PF03466 LysR substrate binding domain K01M1_47130 PF14602 Hexapeptide repeat of succinyl-transferase K01M1_47130 PF12464 Maltose acetyltransferase K01M1_47140 PF02566 OsmC-like protein K01M1_47150 PF01641 SelR domain K01M1_47150 PF01625 Peptide methionine sulfoxide reductase K01M1_47170 PF04244 Deoxyribodipyrimidine photo-lyase-related protein K01M1_47180 PF03441 FAD binding domain of DNA photolyase K01M1_47180 PF00875 DNA photolyase K01M1_47190 PF00990 Diguanylate cyclase, GGDEF domain K01M1_47220 PF05230 MASE2 domain K01M1_47220 PF00990 Diguanylate cyclase, GGDEF domain K01M1_47250 PF07670 Nucleoside recognition K01M1_47250 PF07662 Na+ dependent nucleoside transporter C-terminus K01M1_47250 PF01773 Na+ dependent nucleoside transporter N-terminus K01M1_47280 PF01212 Beta-eliminating lyase K01M1_47300 PF03116 NQR2, RnfD, RnfE family K01M1_47310 PF01654 Cytochrome bd terminal oxidase subunit I K01M1_47320 PF02322 Cytochrome bd terminal oxidase subunit II K01M1_47350 PF00182 Chitinase class I K01M1_47360 PF01266 FAD dependent oxidoreductase K01M1_47400 PF05525 Branched-chain amino acid transport protein K01M1_47410 PF00990 Diguanylate cyclase, GGDEF domain K01M1_47420 PF00072 Response regulator receiver domain K01M1_47420 PF02954 Bacterial regulatory protein, Fis family K01M1_47420 PF00158 Sigma-54 interaction domain K01M1_47430 PF00072 Response regulator receiver domain K01M1_47430 PF13426 PAS domain K01M1_47430 PF08448 PAS fold K01M1_47430 PF00512 His Kinase A (phospho-acceptor) domain K01M1_47430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K01M1_47440 PF00232 Glycosyl hydrolase family 1 K01M1_47470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K01M1_47470 PF03466 LysR substrate binding domain K01M1_47490 PF12706 Beta-lactamase superfamily domain K01M1_47510 PF18030 RimK PreATP-grasp domain K01M1_47510 PF08443 RimK-like ATP-grasp domain K01M1_47520 PF08443 RimK-like ATP-grasp domain K01M1_47520 PF18030 RimK PreATP-grasp domain K01M1_47530 PF00753 Metallo-beta-lactamase superfamily K01M1_47540 PF17944 Arginine decarboxylase C-terminal helical extension K01M1_47540 PF17810 Arginine decarboxylase helical bundle domain K01M1_47540 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain K01M1_47550 PF00491 Arginase family K01M1_47560 PF07690 Major Facilitator Superfamily K01M1_47570 PF00326 Prolyl oligopeptidase family K01M1_47570 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain K01M1_47600 PF00950 ABC 3 transport family K01M1_47610 PF00005 ABC transporter K01M1_47620 PF01297 Zinc-uptake complex component A periplasmic K01M1_47700 PF02472 Biopolymer transport protein ExbD/TolR K01M1_47710 PF01618 MotA/TolQ/ExbB proton channel family K01M1_47720 PF01618 MotA/TolQ/ExbB proton channel family K01M1_47740 PF00593 TonB dependent receptor K01M1_47740 PF07715 TonB-dependent Receptor Plug Domain K01M1_47750 PF16750 Sensor domain of 2-component histidine kinase K01M1_47750 PF00512 His Kinase A (phospho-acceptor) domain K01M1_47750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K01M1_47750 PF00672 HAMP domain K01M1_47760 PF00072 Response regulator receiver domain K01M1_47760 PF00486 Transcriptional regulatory protein, C terminal K01M1_47770 PF03009 Glycerophosphoryl diester phosphodiesterase family K01M1_47790 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K01M1_47790 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain K01M1_47800 PF10928 Protein of unknown function (DUF2810) K01M1_47910 PF04013 Putative SAM-dependent RNA methyltransferase K01M1_47920 PF01523 Putative modulator of DNA gyrase K01M1_47930 PF01523 Putative modulator of DNA gyrase K01M1_47940 PF08543 Phosphomethylpyrimidine kinase K01M1_47950 PF00005 ABC transporter K01M1_47960 PF00528 Binding-protein-dependent transport system inner membrane component K01M1_47970 PF09084 NMT1/THI5 like K01M1_47980 PF03070 TENA/THI-4/PQQC family K01M1_47990 PF02110 Hydroxyethylthiazole kinase family K01M1_48000 PF02581 Thiamine monophosphate synthase K01M1_48020 PF01568 Molydopterin dinucleotide binding domain K01M1_48020 PF18364 Molybdopterin oxidoreductase N-terminal domain K01M1_48020 PF00384 Molybdopterin oxidoreductase K01M1_48030 PF03264 NapC/NirT cytochrome c family, N-terminal region K01M1_48040 PF13302 Acetyltransferase (GNAT) domain K01M1_48080 PF00583 Acetyltransferase (GNAT) family K01M1_48120 PF00155 Aminotransferase class I and II K01M1_48120 PF00392 Bacterial regulatory proteins, gntR family K01M1_48130 PF02595 Glycerate kinase family K01M1_48140 PF02447 GntP family permease K01M1_48150 PF13556 PucR C-terminal helix-turn-helix domain K01M1_48150 PF05651 Putative sugar diacid recognition K01M1_48150 PF17853 GGDEF-like domain K01M1_48220 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K01M1_48230 PF12706 Beta-lactamase superfamily domain K01M1_48250 PF07690 Major Facilitator Superfamily K01M1_48260 PF13533 Biotin-lipoyl like K01M1_48270 PF03922 OmpW family K01M1_48290 PF13599 Pentapeptide repeats (9 copies) K01M1_48330 PF01037 Lrp/AsnC ligand binding domain K01M1_48340 PF01810 LysE type translocator K01M1_48350 PF04954 Siderophore-interacting protein K01M1_48350 PF08021 Siderophore-interacting FAD-binding domain K01M1_48360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K01M1_48360 PF03466 LysR substrate binding domain K01M1_48370 PF00797 N-acetyltransferase K01M1_48380 PF08240 Alcohol dehydrogenase GroES-like domain K01M1_48380 PF00107 Zinc-binding dehydrogenase K01M1_48390 PF00756 Putative esterase K01M1_48430 PF17152 Periplasmic sensor domain K01M1_48430 PF00990 Diguanylate cyclase, GGDEF domain K01M1_48460 PF03466 LysR substrate binding domain K01M1_48460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K01M1_48490 PF00849 RNA pseudouridylate synthase K01M1_48500 PF01554 MatE K01M1_48510 PF00990 Diguanylate cyclase, GGDEF domain K01M1_48510 PF00563 EAL domain K01M1_48530 PF06865 Pyrimidine/purine nucleoside phosphorylase K01M1_48550 PF00704 Glycosyl hydrolases family 18 K01M1_48550 PF08329 Chitinase A, N-terminal domain K01M1_48560 PF12697 Alpha/beta hydrolase family K01M1_48600 PF03600 Citrate transporter K01M1_48620 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 K01M1_48640 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain K01M1_48640 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain K01M1_48650 PF02805 Metal binding domain of Ada K01M1_48650 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain K01M1_48650 PF12833 Helix-turn-helix domain K01M1_48650 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain K01M1_48670 PF07681 DoxX K01M1_48680 PF02678 Pirin K01M1_48680 PF17954 Quercetinase C-terminal cupin domain K01M1_48690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family K01M1_48690 PF03466 LysR substrate binding domain K01M1_48720 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase K01M1_48740 PF03616 Sodium/glutamate symporter K01M1_48750 PF00155 Aminotransferase class I and II K01M1_48750 PF00392 Bacterial regulatory proteins, gntR family K01M1_48760 PF00005 ABC transporter K01M1_48780 PF03616 Sodium/glutamate symporter K01M1_48810 PF00672 HAMP domain K01M1_48810 PF17200 Single Cache domain 2 K01M1_48810 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain K01M1_48820 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD K01M1_48840 PF04397 LytTr DNA-binding domain K01M1_48840 PF00072 Response regulator receiver domain K01M1_48850 PF07694 5TMR of 5TMR-LYT K01M1_48850 PF06580 Histidine kinase K01M1_48850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K01M1_48850 PF13492 GAF domain K01M1_48890 PF00005 ABC transporter K01M1_48910 PF01098 Cell cycle protein K01M1_48920 PF01709 Transcriptional regulator K01M1_48940 PF17149 Periplasmic sensor domain found in signal transduction proteins K01M1_48940 PF00672 HAMP domain K01M1_48940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K01M1_48940 PF00512 His Kinase A (phospho-acceptor) domain K01M1_48940 PF01627 Hpt domain K01M1_48940 PF00072 Response regulator receiver domain K01M1_48960 PF00925 GTP cyclohydrolase II K01M1_48960 PF08719 Domain of unknown function (DUF1768) K01M1_48980 PF00005 ABC transporter K01M1_48980 PF08352 Oligopeptide/dipeptide transporter, C-terminal region K01M1_48990 PF00005 ABC transporter K01M1_48990 PF08352 Oligopeptide/dipeptide transporter, C-terminal region