K04M1_00010 SM00382 ATPases associated with a variety of cellular activities K04M1_00010 SM00760 Bacterial dnaA protein helix-turn-helix domain K04M1_00020 SM00480 DNA polymerase III beta subunit K04M1_00040 SM00387 Histidine kinase-like ATPases K04M1_00040 SM00433 TopoisomeraseII K04M1_00090 SM00642 Alpha-amylase domain K04M1_00170 SM00829 Enoylreductase K04M1_00430 SM00382 ATPases associated with a variety of cellular activities K04M1_00480 SM00354 helix_turn _helix lactose operon repressor K04M1_00610 SM00344 helix_turn_helix ASNC type K04M1_00620 SM00052 Putative diguanylate phosphodiesterase K04M1_00620 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) K04M1_00620 SM00091 PAS domain K04M1_00620 SM00267 diguanylate cyclase K04M1_00700 SM00382 ATPases associated with a variety of cellular activities K04M1_00710 SM00749 bacterial OsmY and nodulation domain K04M1_00750 SM00046 Diacylglycerol kinase catalytic domain (presumed) K04M1_00750 SM00195 Dual specificity phosphatase, catalytic domain K04M1_00750 SM00404 Protein tyrosine phosphatase, catalytic domain motif K04M1_00820 SM00052 Putative diguanylate phosphodiesterase K04M1_00820 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) K04M1_00820 SM00091 PAS domain K04M1_00820 SM00267 diguanylate cyclase K04M1_00920 SM01004 Delta-aminolevulinic acid dehydratase K04M1_00950 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs K04M1_00950 SM00474 3'-5' exonuclease K04M1_00950 SM00475 5'-3' exonuclease K04M1_00950 SM00482 DNA polymerase A domain K04M1_01010 SM00729 Elongator protein 3, MiaB family, Radical SAM K04M1_01030 SM00052 Putative diguanylate phosphodiesterase K04M1_01030 SM00267 diguanylate cyclase K04M1_01030 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K04M1_01040 SM00382 ATPases associated with a variety of cellular activities K04M1_01040 SM00448 cheY-homologous receiver domain K04M1_01050 SM00091 PAS domain K04M1_01050 SM00387 Histidine kinase-like ATPases K04M1_01050 SM00388 His Kinase A (phosphoacceptor) domain K04M1_01070 SM01230 K04M1_01070 K04M1_01170 SM00363 S4 RNA-binding domain K04M1_01200 SM00382 ATPases associated with a variety of cellular activities K04M1_01360 SM00316 Ribosomal protein S1-like RNA-binding domain K04M1_01360 SM00732 Likely ribonuclease with RNase H fold. K04M1_01400 SM00448 cheY-homologous receiver domain K04M1_01400 SM00862 Transcriptional regulatory protein, C terminal K04M1_01410 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K04M1_01410 SM00387 Histidine kinase-like ATPases K04M1_01410 SM00388 His Kinase A (phosphoacceptor) domain K04M1_01430 SM00487 DEAD-like helicases superfamily K04M1_01430 SM00490 helicase superfamily c-terminal domain K04M1_01450 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. K04M1_01450 SM00954 Region found in RelA / SpoT proteins K04M1_01460 SM01409 K04M1_01460 K04M1_01470 SM00072 Guanylate kinase homologues. K04M1_01480 SM00028 Tetratricopeptide repeats K04M1_01580 SM00382 ATPases associated with a variety of cellular activities K04M1_01590 SM00382 ATPases associated with a variety of cellular activities K04M1_01670 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K04M1_01670 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K04M1_01670 SM01049 K04M1_01670 K04M1_01720 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain K04M1_01720 SM01232 K04M1_01720 K04M1_01740 SM00672 Putative lipopolysaccharide-modifying enzyme. K04M1_02380 SM01002 Alanine dehydrogenase/PNT, C-terminal domain K04M1_02380 SM01003 Alanine dehydrogenase/PNT, N-terminal domain K04M1_02450 SM00849 Metallo-beta-lactamase superfamily K04M1_02450 SM01027 Beta-Casp domain K04M1_02540 SM00984 UDP binding domain K04M1_02740 SM00448 cheY-homologous receiver domain K04M1_02750 SM00091 PAS domain K04M1_02750 SM00387 Histidine kinase-like ATPases K04M1_02800 SM00764 Citrate lyase ligase C-terminal domain K04M1_02880 SM00382 ATPases associated with a variety of cellular activities K04M1_02880 SM01086 C-terminal, D2-small domain, of ClpB protein K04M1_02920 SM00354 helix_turn _helix lactose operon repressor K04M1_02930 SM00487 DEAD-like helicases superfamily K04M1_02930 SM00490 helicase superfamily c-terminal domain K04M1_02950 SM01403 K04M1_02950 K04M1_02990 SM01382 K04M1_02990 K04M1_02990 SM01383 K04M1_02990 K04M1_03020 SM00322 K homology RNA-binding domain K04M1_03060 SM01374 K04M1_03060 K04M1_03070 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. K04M1_03200 SM00363 S4 RNA-binding domain K04M1_03200 SM01390 K04M1_03200 K04M1_03210 SM00662 RNA polymerases D K04M1_03270 SM00487 DEAD-like helicases superfamily K04M1_03270 SM00490 helicase superfamily c-terminal domain K04M1_03390 SM00382 ATPases associated with a variety of cellular activities K04M1_03550 SM00382 ATPases associated with a variety of cellular activities K04M1_03730 SM00650 Ribosomal RNA adenine dimethylases K04M1_03770 SM00271 DnaJ molecular chaperone homology domain K04M1_03810 SM01329 K04M1_03810 K04M1_03820 SM00917 LeuA allosteric (dimerisation) domain K04M1_03840 SM00014 Acid phosphatase homologues K04M1_03900 SM00267 diguanylate cyclase K04M1_03910 SM00345 helix_turn_helix gluconate operon transcriptional repressor K04M1_03930 SM00420 helix_turn_helix, Deoxyribose operon repressor K04M1_03930 SM01134 K04M1_03930 K04M1_03970 SM01120 K04M1_03970 K04M1_04030 SM00563 Phosphate acyltransferases K04M1_04090 SM00400 zinc finger K04M1_04090 SM00493 K04M1_04090 K04M1_04090 SM00766 DNA primase DnaG DnaB-binding K04M1_04140 SM01207 K04M1_04140 K04M1_04150 SM00905 Dihydroneopterin aldolase K04M1_04190 SM00382 ATPases associated with a variety of cellular activities K04M1_04220 SM00287 Bacterial SH3 domain homologues K04M1_04250 SM00880 K04M1_04250 K04M1_04250 SM01118 K04M1_04250 K04M1_04270 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K04M1_04350 SM00387 Histidine kinase-like ATPases K04M1_04350 SM00433 TopoisomeraseII K04M1_04360 SM00434 DNA Topoisomerase IV K04M1_04370 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. K04M1_04380 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. K04M1_04500 SM00749 bacterial OsmY and nodulation domain K04M1_04660 SM00842 Cell division protein FtsA K04M1_04670 SM00864 Tubulin/FtsZ family, GTPase domain K04M1_04670 SM00865 Tubulin/FtsZ family, C-terminal domain K04M1_04700 SM00957 SecA DEAD-like domain K04M1_04700 SM00958 SecA preprotein cross-linking domain K04M1_04730 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain K04M1_04740 SM00851 MGS-like domain K04M1_04740 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain K04M1_04880 SM00729 Elongator protein 3, MiaB family, Radical SAM K04M1_04890 SM00091 PAS domain K04M1_04890 SM00267 diguanylate cyclase K04M1_04900 SM00073 Histidine Phosphotransfer domain K04M1_04900 SM00091 PAS domain K04M1_04900 SM00387 Histidine kinase-like ATPases K04M1_04900 SM00388 His Kinase A (phosphoacceptor) domain K04M1_04900 SM00448 cheY-homologous receiver domain K04M1_04920 SM00448 cheY-homologous receiver domain K04M1_04920 SM00862 Transcriptional regulatory protein, C terminal K04M1_05010 SM00518 AP endonuclease family 2 K04M1_05020 SM00986 Uracil DNA glycosylase superfamily K04M1_05020 SM00987 UreE urease accessory protein, C-terminal domain K04M1_05070 SM00487 DEAD-like helicases superfamily K04M1_05070 SM00490 helicase superfamily c-terminal domain K04M1_05140 SM00937 K04M1_05140 K04M1_05160 SM00382 ATPases associated with a variety of cellular activities K04M1_05210 SM00927 DNA mismatch repair enzyme MutH K04M1_05230 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. K04M1_05270 SM01154 K04M1_05270 K04M1_05300 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor K04M1_05330 SM00904 Riboflavin kinase K04M1_05380 SM00226 Low molecular weight phosphatase family K04M1_05390 SM00448 cheY-homologous receiver domain K04M1_05390 SM00850 LytTr DNA-binding domain K04M1_05480 SM00830 Chorismate mutase type II K04M1_05510 SM00382 ATPases associated with a variety of cellular activities K04M1_05550 SM00830 Chorismate mutase type II K04M1_05570 SM00062 Bacterial periplasmic substrate-binding proteins K04M1_05590 SM00363 S4 RNA-binding domain K04M1_05610 SM00382 ATPases associated with a variety of cellular activities K04M1_05610 SM01086 C-terminal, D2-small domain, of ClpB protein K04M1_05770 SM00448 cheY-homologous receiver domain K04M1_05770 SM00862 Transcriptional regulatory protein, C terminal K04M1_05780 SM00091 PAS domain K04M1_05780 SM00387 Histidine kinase-like ATPases K04M1_05780 SM00388 His Kinase A (phosphoacceptor) domain K04M1_05840 SM00382 ATPases associated with a variety of cellular activities K04M1_05920 SM00116 Domain in cystathionine beta-synthase and other proteins. K04M1_05930 SM00020 Trypsin-like serine protease K04M1_05960 SM01323 K04M1_05960 K04M1_06070 SM00271 DnaJ molecular chaperone homology domain K04M1_06120 SM00562 K04M1_06120 K04M1_06140 SM00530 Helix-turn-helix XRE-family like proteins K04M1_06180 SM00564 beta-propeller repeat K04M1_06190 SM00382 ATPases associated with a variety of cellular activities K04M1_06230 SM00116 Domain in cystathionine beta-synthase and other proteins. K04M1_06230 SM01240 K04M1_06230 K04M1_06260 SM00028 Tetratricopeptide repeats K04M1_06400 SM00495 Chitin-binding domain type 3 K04M1_06670 SM00271 DnaJ molecular chaperone homology domain K04M1_06750 SM00062 Bacterial periplasmic substrate-binding proteins K04M1_06760 SM01211 K04M1_06760 K04M1_06870 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase K04M1_06970 SM00861 Transketolase, pyrimidine binding domain K04M1_07020 SM00981 K04M1_07020 K04M1_07070 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs K04M1_07070 SM00475 5'-3' exonuclease K04M1_07090 SM00267 diguanylate cyclase K04M1_07100 SM00028 Tetratricopeptide repeats K04M1_07160 SM00382 ATPases associated with a variety of cellular activities K04M1_07160 SM00930 K04M1_07160 K04M1_07180 SM00354 helix_turn _helix lactose operon repressor K04M1_07200 SM00642 Alpha-amylase domain K04M1_07220 SM00862 Transcriptional regulatory protein, C terminal K04M1_07250 SM00729 Elongator protein 3, MiaB family, Radical SAM K04M1_07280 SM00936 Penicillin-binding protein 5, C-terminal domain K04M1_07390 SM00116 Domain in cystathionine beta-synthase and other proteins. K04M1_07390 SM01091 Transporter associated domain K04M1_07420 SM00729 Elongator protein 3, MiaB family, Radical SAM K04M1_07660 SM01400 K04M1_07660 K04M1_07700 SM00937 K04M1_07700 K04M1_07770 SM00363 S4 RNA-binding domain K04M1_07780 SM00463 Small MutS-related domain K04M1_07830 SM01081 Putative carbohydrate binding domain K04M1_07980 SM00858 K04M1_07980 K04M1_07990 SM00260 Two component signalling adaptor domain K04M1_07990 SM00448 cheY-homologous receiver domain K04M1_08000 SM00138 Methyltransferase, chemotaxis proteins K04M1_08090 SM00047 Lysozyme subfamily 2 K04M1_08210 SM00771 ZipA, C-terminal domain (FtsZ-binding) K04M1_08220 SM00278 Helix-hairpin-helix DNA-binding motif class 1 K04M1_08220 SM00292 breast cancer carboxy-terminal domain K04M1_08220 SM00532 Ligase N family K04M1_08270 SM00244 prohibitin homologues K04M1_08360 SM00028 Tetratricopeptide repeats K04M1_08420 SM00938 Nitrogen regulatory protein P-II K04M1_08430 SM00116 Domain in cystathionine beta-synthase and other proteins. K04M1_08490 SM00862 Transcriptional regulatory protein, C terminal K04M1_08500 SM00387 Histidine kinase-like ATPases K04M1_08540 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. K04M1_08750 SM00861 Transketolase, pyrimidine binding domain K04M1_08780 SM00881 CoA binding domain K04M1_08800 SM00382 ATPases associated with a variety of cellular activities K04M1_08820 SM00342 helix_turn_helix, arabinose operon control protein K04M1_08830 SM00899 K04M1_08830 K04M1_08880 SM00836 DALR anticodon binding domain K04M1_08880 SM01016 Arginyl tRNA synthetase N terminal dom K04M1_08910 SM00020 Trypsin-like serine protease K04M1_08930 SM00487 DEAD-like helicases superfamily K04M1_08930 SM00491 K04M1_08930 K04M1_08990 SM00474 3'-5' exonuclease K04M1_09100 SM00825 Beta-ketoacyl synthase K04M1_09110 SM00822 K04M1_09110 K04M1_09130 SM00825 Beta-ketoacyl synthase K04M1_09250 SM00563 Phosphate acyltransferases K04M1_09310 SM00487 DEAD-like helicases superfamily K04M1_09310 SM00490 helicase superfamily c-terminal domain K04M1_09420 SM00382 ATPases associated with a variety of cellular activities K04M1_09420 SM00448 cheY-homologous receiver domain K04M1_09430 SM00387 Histidine kinase-like ATPases K04M1_09430 SM00388 His Kinase A (phosphoacceptor) domain K04M1_09460 SM00382 ATPases associated with a variety of cellular activities K04M1_09460 SM00994 ClpX C4-type zinc finger K04M1_09460 SM01086 C-terminal, D2-small domain, of ClpB protein K04M1_09470 SM00382 ATPases associated with a variety of cellular activities K04M1_09470 SM00464 Found in ATP-dependent protease La (LON) K04M1_09480 SM00411 bacterial (prokaryotic) histone like domain K04M1_09500 SM00278 Helix-hairpin-helix DNA-binding motif class 1 K04M1_09520 SM01144 K04M1_09520 K04M1_09530 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. K04M1_09540 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. K04M1_09600 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain K04M1_09640 SM00563 Phosphate acyltransferases K04M1_09660 SM00978 K04M1_09660 K04M1_09780 SM00344 helix_turn_helix ASNC type K04M1_09840 SM00062 Bacterial periplasmic substrate-binding proteins K04M1_09840 SM00267 diguanylate cyclase K04M1_09860 SM00116 Domain in cystathionine beta-synthase and other proteins. K04M1_09900 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K04M1_09900 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K04M1_10000 SM00487 DEAD-like helicases superfamily K04M1_10000 SM00490 helicase superfamily c-terminal domain K04M1_10000 SM00982 K04M1_10000 K04M1_10000 SM01058 CarD-like/TRCF domain K04M1_10030 SM00382 ATPases associated with a variety of cellular activities K04M1_10060 SM00849 Metallo-beta-lactamase superfamily K04M1_10070 SM00382 ATPases associated with a variety of cellular activities K04M1_10130 SM00763 PrkA AAA domain K04M1_10210 SM00382 ATPases associated with a variety of cellular activities K04M1_10220 SM00062 Bacterial periplasmic substrate-binding proteins K04M1_10220 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. K04M1_10250 SM01276 K04M1_10250 K04M1_10300 SM00491 K04M1_10300 K04M1_10360 SM00357 Cold shock protein domain K04M1_10380 SM00382 ATPases associated with a variety of cellular activities K04M1_10380 SM01086 C-terminal, D2-small domain, of ClpB protein K04M1_10390 SM00316 Ribosomal protein S1-like RNA-binding domain K04M1_10450 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain K04M1_10450 SM00437 Bacterial DNA topoisomerase I DNA-binding domain K04M1_10450 SM00493 K04M1_10450 K04M1_10520 SM00354 helix_turn _helix lactose operon repressor K04M1_10540 SM00448 cheY-homologous receiver domain K04M1_10540 SM00862 Transcriptional regulatory protein, C terminal K04M1_10700 SM00278 Helix-hairpin-helix DNA-binding motif class 1 K04M1_10710 SM00382 ATPases associated with a variety of cellular activities K04M1_10820 SM00028 Tetratricopeptide repeats K04M1_10890 SM00387 Histidine kinase-like ATPases K04M1_10890 SM00388 His Kinase A (phosphoacceptor) domain K04M1_10890 SM00448 cheY-homologous receiver domain K04M1_11010 SM00347 helix_turn_helix multiple antibiotic resistance protein K04M1_11070 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K04M1_11120 SM01002 Alanine dehydrogenase/PNT, C-terminal domain K04M1_11120 SM01003 Alanine dehydrogenase/PNT, N-terminal domain K04M1_11130 SM00344 helix_turn_helix ASNC type K04M1_11140 SM00843 K04M1_11140 K04M1_11160 SM00382 ATPases associated with a variety of cellular activities K04M1_11220 SM00729 Elongator protein 3, MiaB family, Radical SAM K04M1_11220 SM00876 Biotin and Thiamin Synthesis associated domain K04M1_11410 SM00528 Domain in histone-like proteins of HNS family K04M1_11520 SM00052 Putative diguanylate phosphodiesterase K04M1_11550 SM00840 K04M1_11550 K04M1_11700 SM01131 K04M1_11700 K04M1_11720 SM00382 ATPases associated with a variety of cellular activities K04M1_11730 SM00382 ATPases associated with a variety of cellular activities K04M1_11770 SM00382 ATPases associated with a variety of cellular activities K04M1_11880 SM00155 Phospholipase D. Active site motifs. K04M1_11940 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. K04M1_11940 SM00382 ATPases associated with a variety of cellular activities K04M1_11970 SM00382 ATPases associated with a variety of cellular activities K04M1_12060 SM00387 Histidine kinase-like ATPases K04M1_12070 SM00448 cheY-homologous receiver domain K04M1_12070 SM00862 Transcriptional regulatory protein, C terminal K04M1_12090 SM00487 DEAD-like helicases superfamily K04M1_12090 SM00490 helicase superfamily c-terminal domain K04M1_12100 SM00363 S4 RNA-binding domain K04M1_12150 SM00382 ATPases associated with a variety of cellular activities K04M1_12340 SM00448 cheY-homologous receiver domain K04M1_12350 SM00387 Histidine kinase-like ATPases K04M1_12390 SM00382 ATPases associated with a variety of cellular activities K04M1_12400 SM00382 ATPases associated with a variety of cellular activities K04M1_12450 SM00267 diguanylate cyclase K04M1_12480 SM00919 Malic enzyme, NAD binding domain K04M1_12480 SM01274 K04M1_12480 K04M1_12490 SM00487 DEAD-like helicases superfamily K04M1_12490 SM00490 helicase superfamily c-terminal domain K04M1_12660 SM00345 helix_turn_helix gluconate operon transcriptional repressor K04M1_12660 SM00866 K04M1_12660 K04M1_12690 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain K04M1_12740 SM00530 Helix-turn-helix XRE-family like proteins K04M1_12810 SM00873 B3/4 domain K04M1_12810 SM00874 tRNA synthetase B5 domain K04M1_12810 SM00896 Ferredoxin-fold anticodon binding domain K04M1_12830 SM00411 bacterial (prokaryotic) histone like domain K04M1_12900 SM00479 K04M1_12900 K04M1_13420 SM00855 Phosphoglycerate mutase family K04M1_13460 SM00382 ATPases associated with a variety of cellular activities K04M1_13550 SM00245 tail specific protease K04M1_13570 SM00345 helix_turn_helix gluconate operon transcriptional repressor K04M1_13570 SM00895 K04M1_13570 K04M1_13630 SM01130 K04M1_13630 K04M1_13640 SM00382 ATPases associated with a variety of cellular activities K04M1_13680 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins K04M1_13700 SM00382 ATPases associated with a variety of cellular activities K04M1_13710 SM00382 ATPases associated with a variety of cellular activities K04M1_13980 SM01230 K04M1_13980 K04M1_14000 SM00530 Helix-turn-helix XRE-family like proteins K04M1_14070 SM00052 Putative diguanylate phosphodiesterase K04M1_14090 SM00347 helix_turn_helix multiple antibiotic resistance protein K04M1_14150 SM00387 Histidine kinase-like ATPases K04M1_14150 SM00388 His Kinase A (phosphoacceptor) domain K04M1_14150 SM00448 cheY-homologous receiver domain K04M1_14160 SM00052 Putative diguanylate phosphodiesterase K04M1_14160 SM00267 diguanylate cyclase K04M1_14180 SM00028 Tetratricopeptide repeats K04M1_14240 SM00857 Resolvase, N terminal domain K04M1_14250 SM00530 Helix-turn-helix XRE-family like proteins K04M1_14310 SM00857 Resolvase, N terminal domain K04M1_14600 SM00382 ATPases associated with a variety of cellular activities K04M1_14610 SM00100 Cyclic nucleotide-monophosphate binding domain K04M1_14610 SM00116 Domain in cystathionine beta-synthase and other proteins. K04M1_14620 SM00479 K04M1_14620 K04M1_14690 SM00028 Tetratricopeptide repeats K04M1_14770 SM00382 ATPases associated with a variety of cellular activities K04M1_14820 SM00420 helix_turn_helix, Deoxyribose operon repressor K04M1_14820 SM01134 K04M1_14820 K04M1_14850 SM00267 diguanylate cyclase K04M1_14900 SM00100 Cyclic nucleotide-monophosphate binding domain K04M1_14900 SM00387 Histidine kinase-like ATPases K04M1_14910 SM00448 cheY-homologous receiver domain K04M1_14920 SM00052 Putative diguanylate phosphodiesterase K04M1_14920 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) K04M1_14920 SM00091 PAS domain K04M1_14920 SM00267 diguanylate cyclase K04M1_14930 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. K04M1_14990 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. K04M1_15000 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. K04M1_15050 SM00382 ATPases associated with a variety of cellular activities K04M1_15100 SM00382 ATPases associated with a variety of cellular activities K04M1_15110 SM00382 ATPases associated with a variety of cellular activities K04M1_15220 SM00267 diguanylate cyclase K04M1_15220 SM01079 K04M1_15220 K04M1_15230 SM00479 K04M1_15230 K04M1_15310 SM00382 ATPases associated with a variety of cellular activities K04M1_15310 SM00487 DEAD-like helicases superfamily K04M1_15310 SM00490 helicase superfamily c-terminal domain K04M1_15310 SM00847 Helicase associated domain (HA2) Add an annotation K04M1_15460 SM00382 ATPases associated with a variety of cellular activities K04M1_15460 SM00448 cheY-homologous receiver domain K04M1_15590 SM00448 cheY-homologous receiver domain K04M1_15600 SM00267 diguanylate cyclase K04M1_15630 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K04M1_15690 SM01144 K04M1_15690 K04M1_15720 SM00852 Probable molybdopterin binding domain K04M1_15740 SM00382 ATPases associated with a variety of cellular activities K04M1_15770 SM00382 ATPases associated with a variety of cellular activities K04M1_15770 SM00448 cheY-homologous receiver domain K04M1_15780 SM00387 Histidine kinase-like ATPases K04M1_15780 SM00388 His Kinase A (phosphoacceptor) domain K04M1_15790 SM00382 ATPases associated with a variety of cellular activities K04M1_15870 SM00926 Molybdopterin oxidoreductase Fe4S4 domain K04M1_16000 SM00382 ATPases associated with a variety of cellular activities K04M1_16060 SM00100 Cyclic nucleotide-monophosphate binding domain K04M1_16060 SM00419 helix_turn_helix, cAMP Regulatory protein K04M1_16160 SM00897 FIST N domain K04M1_16160 SM01204 K04M1_16160 K04M1_16170 SM00387 Histidine kinase-like ATPases K04M1_16170 SM00388 His Kinase A (phosphoacceptor) domain K04M1_16170 SM00448 cheY-homologous receiver domain K04M1_16250 SM00382 ATPases associated with a variety of cellular activities K04M1_16270 SM00981 K04M1_16270 K04M1_16330 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. K04M1_16330 SM00245 tail specific protease K04M1_16340 SM00945 ProQ/FINO family K04M1_16360 SM00382 ATPases associated with a variety of cellular activities K04M1_16460 SM00062 Bacterial periplasmic substrate-binding proteins K04M1_16500 SM00382 ATPases associated with a variety of cellular activities K04M1_16550 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K04M1_16560 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase K04M1_16570 SM00327 von Willebrand factor (vWF) type A domain K04M1_16600 SM00112 Cadherin repeats. K04M1_16600 SM00237 Domains in Na-Ca exchangers and integrin-beta4 K04M1_16600 SM00327 von Willebrand factor (vWF) type A domain K04M1_16600 SM00736 Dystroglycan-type cadherin-like domains. K04M1_16640 SM00028 Tetratricopeptide repeats K04M1_16640 SM00267 diguanylate cyclase K04M1_16650 SM00346 helix_turn_helix isocitrate lyase regulation K04M1_16730 SM00829 Enoylreductase K04M1_16740 SM00342 helix_turn_helix, arabinose operon control protein K04M1_16760 SM00062 Bacterial periplasmic substrate-binding proteins K04M1_16760 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. K04M1_16780 SM00829 Enoylreductase K04M1_16800 SM00382 ATPases associated with a variety of cellular activities K04M1_16820 SM00062 Bacterial periplasmic substrate-binding proteins K04M1_16820 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. K04M1_16930 SM00530 Helix-turn-helix XRE-family like proteins K04M1_16980 SM00020 Trypsin-like serine protease K04M1_16980 SM00495 Chitin-binding domain type 3 K04M1_17050 SM00345 helix_turn_helix gluconate operon transcriptional repressor K04M1_17050 SM00895 K04M1_17050 K04M1_17250 SM00382 ATPases associated with a variety of cellular activities K04M1_17330 SM00342 helix_turn_helix, arabinose operon control protein K04M1_17530 SM00342 helix_turn_helix, arabinose operon control protein K04M1_17580 SM00382 ATPases associated with a variety of cellular activities K04M1_17610 SM01350 K04M1_17610 K04M1_17640 SM00342 helix_turn_helix, arabinose operon control protein K04M1_17640 SM00871 Bacterial transcription activator, effector binding domain K04M1_17660 SM00448 cheY-homologous receiver domain K04M1_17670 SM00091 PAS domain K04M1_17670 SM00387 Histidine kinase-like ATPases K04M1_17960 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain K04M1_17980 SM01266 K04M1_17980 K04M1_18270 SM00547 Zinc finger domain K04M1_18280 SM00507 HNH nucleases K04M1_18440 SM00267 diguanylate cyclase K04M1_18660 SM00926 Molybdopterin oxidoreductase Fe4S4 domain K04M1_18690 SM00387 Histidine kinase-like ATPases K04M1_18690 SM00388 His Kinase A (phosphoacceptor) domain K04M1_18690 SM00448 cheY-homologous receiver domain K04M1_18710 SM00530 Helix-turn-helix XRE-family like proteins K04M1_18770 SM00342 helix_turn_helix, arabinose operon control protein K04M1_18840 SM00052 Putative diguanylate phosphodiesterase K04M1_18850 SM00421 helix_turn_helix, Lux Regulon K04M1_18850 SM00448 cheY-homologous receiver domain K04M1_19020 SM00062 Bacterial periplasmic substrate-binding proteins K04M1_19020 SM00387 Histidine kinase-like ATPases K04M1_19020 SM00388 His Kinase A (phosphoacceptor) domain K04M1_19020 SM00448 cheY-homologous receiver domain K04M1_19030 SM00421 helix_turn_helix, Lux Regulon K04M1_19030 SM00448 cheY-homologous receiver domain K04M1_19060 SM00528 Domain in histone-like proteins of HNS family K04M1_19070 SM00344 helix_turn_helix ASNC type K04M1_19360 SM00091 PAS domain K04M1_19360 SM00382 ATPases associated with a variety of cellular activities K04M1_19420 SM00387 Histidine kinase-like ATPases K04M1_19420 SM00388 His Kinase A (phosphoacceptor) domain K04M1_19420 SM00448 cheY-homologous receiver domain K04M1_19470 SM00052 Putative diguanylate phosphodiesterase K04M1_19500 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K04M1_19500 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K04M1_19530 SM00345 helix_turn_helix gluconate operon transcriptional repressor K04M1_19580 SM00100 Cyclic nucleotide-monophosphate binding domain K04M1_19580 SM00116 Domain in cystathionine beta-synthase and other proteins. K04M1_19590 SM00479 K04M1_19590 K04M1_19600 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K04M1_19600 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K04M1_19620 SM00347 helix_turn_helix multiple antibiotic resistance protein K04M1_19630 SM00421 helix_turn_helix, Lux Regulon K04M1_19630 SM00448 cheY-homologous receiver domain K04M1_19640 SM00387 Histidine kinase-like ATPases K04M1_19640 SM01049 K04M1_19640 K04M1_19700 SM00849 Metallo-beta-lactamase superfamily K04M1_19880 SM00434 DNA Topoisomerase IV K04M1_19930 SM00852 Probable molybdopterin binding domain K04M1_20040 SM00278 Helix-hairpin-helix DNA-binding motif class 1 K04M1_20040 SM00465 GIY-YIG type nucleases (URI domain) K04M1_20050 SM00421 helix_turn_helix, Lux Regulon K04M1_20050 SM00448 cheY-homologous receiver domain K04M1_20060 SM00486 DNA polymerase type-B family K04M1_20080 SM00841 Elongation factor P, C-terminal K04M1_20080 SM01185 K04M1_20080 K04M1_20100 SM00363 S4 RNA-binding domain K04M1_20130 SM00481 DNA polymerase alpha chain like domain K04M1_20210 SM00100 Cyclic nucleotide-monophosphate binding domain K04M1_20210 SM00419 helix_turn_helix, cAMP Regulatory protein K04M1_20250 SM00387 Histidine kinase-like ATPases K04M1_20250 SM00388 His Kinase A (phosphoacceptor) domain K04M1_20250 SM00448 cheY-homologous receiver domain K04M1_20350 SM00052 Putative diguanylate phosphodiesterase K04M1_20350 SM00091 PAS domain K04M1_20360 SM00729 Elongator protein 3, MiaB family, Radical SAM K04M1_20420 SM00448 cheY-homologous receiver domain K04M1_20420 SM00862 Transcriptional regulatory protein, C terminal K04M1_20430 SM00387 Histidine kinase-like ATPases K04M1_20430 SM00388 His Kinase A (phosphoacceptor) domain K04M1_20530 SM00382 ATPases associated with a variety of cellular activities K04M1_20650 SM00421 helix_turn_helix, Lux Regulon K04M1_20650 SM00448 cheY-homologous receiver domain K04M1_20660 SM00387 Histidine kinase-like ATPases K04M1_20660 SM00388 His Kinase A (phosphoacceptor) domain K04M1_20690 SM00926 Molybdopterin oxidoreductase Fe4S4 domain K04M1_20780 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family K04M1_20790 SM00028 Tetratricopeptide repeats K04M1_20810 SM00411 bacterial (prokaryotic) histone like domain K04M1_20820 SM00316 Ribosomal protein S1-like RNA-binding domain K04M1_20850 SM00822 K04M1_20850 K04M1_20880 SM00481 DNA polymerase alpha chain like domain K04M1_20890 SM00260 Two component signalling adaptor domain K04M1_20890 SM00448 cheY-homologous receiver domain K04M1_21040 SM00825 Beta-ketoacyl synthase K04M1_21060 SM00822 K04M1_21060 K04M1_21070 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. K04M1_21130 SM00363 S4 RNA-binding domain K04M1_21140 SM00316 Ribosomal protein S1-like RNA-binding domain K04M1_21160 SM00226 Low molecular weight phosphatase family K04M1_21250 SM00345 helix_turn_helix gluconate operon transcriptional repressor K04M1_21300 SM00267 diguanylate cyclase K04M1_21310 SM00642 Alpha-amylase domain K04M1_21320 SM00382 ATPases associated with a variety of cellular activities K04M1_21400 SM00382 ATPases associated with a variety of cellular activities K04M1_21410 SM00382 ATPases associated with a variety of cellular activities K04M1_21480 SM00852 Probable molybdopterin binding domain K04M1_21490 SM00729 Elongator protein 3, MiaB family, Radical SAM K04M1_21520 SM00382 ATPases associated with a variety of cellular activities K04M1_21520 SM00448 cheY-homologous receiver domain K04M1_21530 SM00487 DEAD-like helicases superfamily K04M1_21530 SM00490 helicase superfamily c-terminal domain K04M1_21600 SM00900 K04M1_21600 K04M1_21620 SM00478 endonuclease III K04M1_21620 SM00525 K04M1_21620 K04M1_21660 SM00479 K04M1_21660 K04M1_21780 SM00859 Semialdehyde dehydrogenase, NAD binding domain K04M1_21890 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain K04M1_21890 SM00437 Bacterial DNA topoisomerase I DNA-binding domain K04M1_21890 SM00493 K04M1_21890 K04M1_21940 SM00870 K04M1_21940 K04M1_21980 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain K04M1_22000 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K04M1_22000 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K04M1_22040 SM00098 Alkaline phosphatase homologues K04M1_22130 SM00493 K04M1_22130 K04M1_22150 SM00382 ATPases associated with a variety of cellular activities K04M1_22190 SM00448 cheY-homologous receiver domain K04M1_22280 SM00859 Semialdehyde dehydrogenase, NAD binding domain K04M1_22300 SM00825 Beta-ketoacyl synthase K04M1_22380 SM00463 Small MutS-related domain K04M1_22390 SM00855 Phosphoglycerate mutase family K04M1_22600 SM00382 ATPases associated with a variety of cellular activities K04M1_22620 SM00260 Two component signalling adaptor domain K04M1_22630 SM00260 Two component signalling adaptor domain K04M1_22650 SM00448 cheY-homologous receiver domain K04M1_22660 SM00073 Histidine Phosphotransfer domain K04M1_22660 SM00260 Two component signalling adaptor domain K04M1_22660 SM00387 Histidine kinase-like ATPases K04M1_22660 SM01231 K04M1_22660 K04M1_22680 SM00448 cheY-homologous receiver domain K04M1_22710 SM00382 ATPases associated with a variety of cellular activities K04M1_22710 SM00962 SRP54-type protein, GTPase domain K04M1_22840 SM00382 ATPases associated with a variety of cellular activities K04M1_22890 SM00382 ATPases associated with a variety of cellular activities K04M1_22890 SM00448 cheY-homologous receiver domain K04M1_22900 SM00387 Histidine kinase-like ATPases K04M1_22900 SM00388 His Kinase A (phosphoacceptor) domain K04M1_22910 SM00382 ATPases associated with a variety of cellular activities K04M1_23090 SM01130 K04M1_23090 K04M1_23170 SM00857 Resolvase, N terminal domain K04M1_23190 SM00382 ATPases associated with a variety of cellular activities K04M1_23340 SM00387 Histidine kinase-like ATPases K04M1_23340 SM00388 His Kinase A (phosphoacceptor) domain K04M1_23340 SM00448 cheY-homologous receiver domain K04M1_23380 SM00357 Cold shock protein domain K04M1_23430 SM00357 Cold shock protein domain K04M1_23450 SM00244 prohibitin homologues K04M1_23460 SM00244 prohibitin homologues K04M1_23490 SM00357 Cold shock protein domain K04M1_23550 SM00028 Tetratricopeptide repeats K04M1_23730 SM00479 K04M1_23730 K04M1_23760 SM00849 Metallo-beta-lactamase superfamily K04M1_23770 SM00257 Lysin motif K04M1_23800 SM00938 Nitrogen regulatory protein P-II K04M1_23820 SM00977 TilS substrate C-terminal domain K04M1_23840 SM00481 DNA polymerase alpha chain like domain K04M1_23900 SM00935 Outer membrane protein (OmpH-like) K04M1_23920 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. K04M1_24010 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. K04M1_24120 SM00849 Metallo-beta-lactamase superfamily K04M1_24240 SM00495 Chitin-binding domain type 3 K04M1_24240 SM00636 K04M1_24240 K04M1_24270 SM00487 DEAD-like helicases superfamily K04M1_24270 SM00490 helicase superfamily c-terminal domain K04M1_24450 SM00487 DEAD-like helicases superfamily K04M1_24620 SM00267 diguanylate cyclase K04M1_24620 SM00448 cheY-homologous receiver domain K04M1_24680 SM00900 K04M1_24680 K04M1_24790 SM00464 Found in ATP-dependent protease La (LON) K04M1_24840 SM00267 diguanylate cyclase K04M1_24870 SM00925 MltA specific insert domain K04M1_25160 SM00420 helix_turn_helix, Deoxyribose operon repressor K04M1_25160 SM01134 K04M1_25160 K04M1_25220 SM00354 helix_turn _helix lactose operon repressor K04M1_25250 SM00421 helix_turn_helix, Lux Regulon K04M1_25340 SM00838 Elongation factor G C-terminus K04M1_25340 SM00889 Elongation factor G, domain IV K04M1_25350 SM00382 ATPases associated with a variety of cellular activities K04M1_25410 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain K04M1_25420 SM01133 K04M1_25420 K04M1_25520 SM00052 Putative diguanylate phosphodiesterase K04M1_25520 SM00091 PAS domain K04M1_25520 SM00267 diguanylate cyclase K04M1_25560 SM00347 helix_turn_helix multiple antibiotic resistance protein K04M1_25570 SM00028 Tetratricopeptide repeats K04M1_25580 SM00316 Ribosomal protein S1-like RNA-binding domain K04M1_25580 SM00322 K homology RNA-binding domain K04M1_25590 SM01387 K04M1_25590 K04M1_25630 SM00316 Ribosomal protein S1-like RNA-binding domain K04M1_25700 SM00382 ATPases associated with a variety of cellular activities K04M1_25720 SM01103 K04M1_25720 K04M1_25770 SM00363 S4 RNA-binding domain K04M1_25850 SM00091 PAS domain K04M1_25850 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K04M1_25850 SM00387 Histidine kinase-like ATPases K04M1_25850 SM00388 His Kinase A (phosphoacceptor) domain K04M1_25850 SM00448 cheY-homologous receiver domain K04M1_25890 SM00382 ATPases associated with a variety of cellular activities K04M1_25900 SM00382 ATPases associated with a variety of cellular activities K04M1_25940 SM01068 Putative carbohydrate binding domain K04M1_25960 SM00382 ATPases associated with a variety of cellular activities K04M1_26000 SM00938 Nitrogen regulatory protein P-II K04M1_26050 SM00487 DEAD-like helicases superfamily K04M1_26050 SM00490 helicase superfamily c-terminal domain K04M1_26050 SM00847 Helicase associated domain (HA2) Add an annotation K04M1_26150 SM00382 ATPases associated with a variety of cellular activities K04M1_26170 SM00947 Carbonic anhydrase K04M1_26230 SM00345 helix_turn_helix gluconate operon transcriptional repressor K04M1_26230 SM00895 K04M1_26230 K04M1_26240 SM00644 K04M1_26240 K04M1_26370 SM00382 ATPases associated with a variety of cellular activities K04M1_26370 SM00962 SRP54-type protein, GTPase domain K04M1_26370 SM00963 SRP54-type protein, helical bundle domain K04M1_26390 SM01091 Transporter associated domain K04M1_26450 SM00829 Enoylreductase K04M1_26610 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain K04M1_26630 SM00382 ATPases associated with a variety of cellular activities K04M1_26650 SM00533 DNA-binding domain of DNA mismatch repair MUTS family K04M1_26650 SM00534 ATPase domain of DNA mismatch repair MUTS family K04M1_26670 SM00257 Lysin motif K04M1_26740 SM01192 K04M1_26740 K04M1_26740 SM01193 K04M1_26740 K04M1_26780 SM00954 Region found in RelA / SpoT proteins K04M1_26800 SM00073 Histidine Phosphotransfer domain K04M1_26800 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K04M1_26800 SM00387 Histidine kinase-like ATPases K04M1_26800 SM00388 His Kinase A (phosphoacceptor) domain K04M1_26800 SM00448 cheY-homologous receiver domain K04M1_26850 SM00358 Double-stranded RNA binding motif K04M1_26850 SM00535 Ribonuclease III family K04M1_26870 SM00838 Elongation factor G C-terminus K04M1_27120 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain K04M1_27150 SM00861 Transketolase, pyrimidine binding domain K04M1_27180 SM00731 SprT homologues. K04M1_27230 SM00732 Likely ribonuclease with RNase H fold. K04M1_27250 SM00382 ATPases associated with a variety of cellular activities K04M1_27290 SM01152 K04M1_27290 K04M1_27320 SM00729 Elongator protein 3, MiaB family, Radical SAM K04M1_27360 SM00478 endonuclease III K04M1_27360 SM00525 K04M1_27360 K04M1_27460 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K04M1_27460 SM01049 K04M1_27460 K04M1_27610 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. K04M1_27620 SM00354 helix_turn _helix lactose operon repressor K04M1_27680 SM00495 Chitin-binding domain type 3 K04M1_27790 SM00347 helix_turn_helix multiple antibiotic resistance protein K04M1_27880 SM00563 Phosphate acyltransferases K04M1_27950 SM00382 ATPases associated with a variety of cellular activities K04M1_27970 SM00116 Domain in cystathionine beta-synthase and other proteins. K04M1_28000 SM00382 ATPases associated with a variety of cellular activities K04M1_28060 SM00924 MgtE intracellular N domain K04M1_28120 SM00487 DEAD-like helicases superfamily K04M1_28120 SM00490 helicase superfamily c-terminal domain K04M1_28130 SM00670 Large family of predicted nucleotide-binding domains K04M1_28170 SM00316 Ribosomal protein S1-like RNA-binding domain K04M1_28310 SM00382 ATPases associated with a variety of cellular activities K04M1_28320 SM00028 Tetratricopeptide repeats K04M1_28340 SM00965 Secretin and TonB N terminus short domain K04M1_28380 SM00052 Putative diguanylate phosphodiesterase K04M1_28380 SM00267 diguanylate cyclase K04M1_28400 SM00421 helix_turn_helix, Lux Regulon K04M1_28480 SM01018 B12 binding domain K04M1_28720 SM01005 Alanine racemase, C-terminal domain K04M1_28840 SM00965 Secretin and TonB N terminus short domain K04M1_28880 SM00842 Cell division protein FtsA K04M1_28980 SM00859 Semialdehyde dehydrogenase, NAD binding domain K04M1_29060 SM00919 Malic enzyme, NAD binding domain K04M1_29060 SM01274 K04M1_29060 K04M1_29100 SM00838 Elongation factor G C-terminus K04M1_29100 SM00889 Elongation factor G, domain IV K04M1_29180 SM00320 WD40 repeats K04M1_29250 SM00382 ATPases associated with a variety of cellular activities K04M1_29300 SM00100 Cyclic nucleotide-monophosphate binding domain K04M1_29300 SM00419 helix_turn_helix, cAMP Regulatory protein K04M1_29310 SM01150 K04M1_29310 K04M1_29400 SM00967 RNA 2'-O ribose methyltransferase substrate binding K04M1_29410 SM00316 Ribosomal protein S1-like RNA-binding domain K04M1_29410 SM00357 Cold shock protein domain K04M1_29410 SM00955 K04M1_29410 K04M1_29440 SM00671 Sel1-like repeats. K04M1_29450 SM00788 Adenylosuccinate synthetase K04M1_29470 SM00244 prohibitin homologues K04M1_29480 SM00244 prohibitin homologues K04M1_29520 SM00853 MutL C terminal dimerisation domain K04M1_29520 SM01340 K04M1_29520 K04M1_29530 SM00257 Lysin motif K04M1_29530 SM00646 K04M1_29530 K04M1_29690 SM00479 K04M1_29690 K04M1_29750 SM00450 Rhodanese Homology Domain K04M1_29780 SM00971 Serine acetyltransferase, N-terminal K04M1_29890 SM00841 Elongation factor P, C-terminal K04M1_29890 SM01185 K04M1_29890 K04M1_29940 SM00883 Chaperonin 10 Kd subunit K04M1_29990 SM00448 cheY-homologous receiver domain K04M1_29990 SM00862 Transcriptional regulatory protein, C terminal K04M1_30000 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K04M1_30000 SM00387 Histidine kinase-like ATPases K04M1_30000 SM00388 His Kinase A (phosphoacceptor) domain K04M1_30070 SM00421 helix_turn_helix, Lux Regulon K04M1_30070 SM00448 cheY-homologous receiver domain K04M1_30080 SM01091 Transporter associated domain K04M1_30140 SM00387 Histidine kinase-like ATPases K04M1_30140 SM00388 His Kinase A (phosphoacceptor) domain K04M1_30140 SM00448 cheY-homologous receiver domain K04M1_30170 SM00479 K04M1_30170 K04M1_30210 SM00878 Biotin carboxylase C-terminal domain K04M1_30260 SM00382 ATPases associated with a variety of cellular activities K04M1_30380 SM00862 Transcriptional regulatory protein, C terminal K04M1_30390 SM00422 helix_turn_helix, mercury resistance K04M1_30400 SM00798 AICARFT/IMPCHase bienzyme K04M1_30400 SM00851 MGS-like domain K04M1_30410 SM01209 K04M1_30410 K04M1_30410 SM01210 K04M1_30410 K04M1_30430 SM00411 bacterial (prokaryotic) histone like domain K04M1_30440 SM00116 Domain in cystathionine beta-synthase and other proteins. K04M1_30470 SM00986 Uracil DNA glycosylase superfamily K04M1_30470 SM00987 UreE urease accessory protein, C-terminal domain K04M1_30510 SM00663 RNA polymerase I subunit A N-terminus K04M1_30560 SM00649 Ribosomal protein L11/L12 K04M1_30570 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. K04M1_30570 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. K04M1_30680 SM00155 Phospholipase D. Active site motifs. K04M1_30820 SM00360 RNA recognition motif K04M1_30930 SM00563 Phosphate acyltransferases K04M1_30980 SM00450 Rhodanese Homology Domain K04M1_31010 SM00382 ATPases associated with a variety of cellular activities K04M1_31020 SM00382 ATPases associated with a variety of cellular activities K04M1_31020 SM00962 SRP54-type protein, GTPase domain K04M1_31020 SM00963 SRP54-type protein, helical bundle domain K04M1_31130 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain K04M1_31140 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor K04M1_31150 SM00052 Putative diguanylate phosphodiesterase K04M1_31210 SM01144 K04M1_31210 K04M1_31220 SM00052 Putative diguanylate phosphodiesterase K04M1_31220 SM00897 FIST N domain K04M1_31220 SM01204 K04M1_31220 K04M1_31280 SM01219 K04M1_31280 K04M1_31330 SM00028 Tetratricopeptide repeats K04M1_31450 SM00357 Cold shock protein domain K04M1_31450 SM00382 ATPases associated with a variety of cellular activities K04M1_31450 SM00959 Rho termination factor, N-terminal domain K04M1_31470 SM00487 DEAD-like helicases superfamily K04M1_31470 SM00490 helicase superfamily c-terminal domain K04M1_31520 SM00341 Helicase and RNase D C-terminal K04M1_31520 SM00487 DEAD-like helicases superfamily K04M1_31520 SM00490 helicase superfamily c-terminal domain K04M1_31520 SM00956 K04M1_31520 K04M1_31540 SM00342 helix_turn_helix, arabinose operon control protein K04M1_31660 SM00876 Biotin and Thiamin Synthesis associated domain K04M1_31880 SM01001 AIR carboxylase K04M1_31930 SM00257 Lysin motif K04M1_32070 SM00563 Phosphate acyltransferases K04M1_32090 SM00382 ATPases associated with a variety of cellular activities K04M1_32170 SM00062 Bacterial periplasmic substrate-binding proteins K04M1_32220 SM00382 ATPases associated with a variety of cellular activities K04M1_32300 SM00470 ParB-like nuclease domain K04M1_32330 SM01228 K04M1_32330 K04M1_32390 SM00382 ATPases associated with a variety of cellular activities K04M1_32410 SM00062 Bacterial periplasmic substrate-binding proteins K04M1_32410 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. K04M1_32430 SM00470 ParB-like nuclease domain K04M1_32580 SM00382 ATPases associated with a variety of cellular activities K04M1_32590 SM00052 Putative diguanylate phosphodiesterase K04M1_32590 SM00267 diguanylate cyclase K04M1_32620 SM00448 cheY-homologous receiver domain K04M1_32630 SM00387 Histidine kinase-like ATPases K04M1_32650 SM00421 helix_turn_helix, Lux Regulon K04M1_32660 SM00342 helix_turn_helix, arabinose operon control protein K04M1_32710 SM00360 RNA recognition motif K04M1_32750 SM00344 helix_turn_helix ASNC type K04M1_32770 SM00382 ATPases associated with a variety of cellular activities K04M1_32790 SM00487 DEAD-like helicases superfamily K04M1_32790 SM00490 helicase superfamily c-terminal domain K04M1_32810 SM00342 helix_turn_helix, arabinose operon control protein K04M1_32820 SM00829 Enoylreductase K04M1_32980 SM00347 helix_turn_helix multiple antibiotic resistance protein K04M1_33010 SM00342 helix_turn_helix, arabinose operon control protein K04M1_33010 SM00871 Bacterial transcription activator, effector binding domain K04M1_33020 SM00342 helix_turn_helix, arabinose operon control protein K04M1_33070 SM00382 ATPases associated with a variety of cellular activities K04M1_33120 SM00448 cheY-homologous receiver domain K04M1_33120 SM00862 Transcriptional regulatory protein, C terminal K04M1_33130 SM00387 Histidine kinase-like ATPases K04M1_33250 SM00382 ATPases associated with a variety of cellular activities K04M1_33260 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K04M1_33260 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K04M1_33330 SM00857 Resolvase, N terminal domain K04M1_33340 SM00354 helix_turn _helix lactose operon repressor K04M1_33410 SM00354 helix_turn _helix lactose operon repressor K04M1_33520 SM00642 Alpha-amylase domain K04M1_33560 SM00642 Alpha-amylase domain K04M1_33580 SM00642 Alpha-amylase domain K04M1_33590 SM00671 Sel1-like repeats. K04M1_33630 SM00966 SpoVT / AbrB like domain K04M1_33710 SM00421 helix_turn_helix, Lux Regulon K04M1_33740 SM00642 Alpha-amylase domain K04M1_33760 SM00642 Alpha-amylase domain K04M1_33880 SM00226 Low molecular weight phosphatase family K04M1_33950 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. K04M1_33980 SM00450 Rhodanese Homology Domain K04M1_34000 SM00936 Penicillin-binding protein 5, C-terminal domain K04M1_34010 SM00642 Alpha-amylase domain K04M1_34020 SM00342 helix_turn_helix, arabinose operon control protein K04M1_34240 SM00448 cheY-homologous receiver domain K04M1_34240 SM00862 Transcriptional regulatory protein, C terminal K04M1_34250 SM00387 Histidine kinase-like ATPases K04M1_34250 SM00388 His Kinase A (phosphoacceptor) domain K04M1_34560 SM00382 ATPases associated with a variety of cellular activities K04M1_34610 SM00382 ATPases associated with a variety of cellular activities K04M1_34630 SM00020 Trypsin-like serine protease K04M1_34670 SM00481 DNA polymerase alpha chain like domain K04M1_34750 SM00448 cheY-homologous receiver domain K04M1_34750 SM00862 Transcriptional regulatory protein, C terminal K04M1_34760 SM00388 His Kinase A (phosphoacceptor) domain K04M1_34790 SM00062 Bacterial periplasmic substrate-binding proteins K04M1_34800 SM00052 Putative diguanylate phosphodiesterase K04M1_34800 SM00267 diguanylate cyclase K04M1_34820 SM00829 Enoylreductase K04M1_34830 SM00972 Spore Coat Protein U domain K04M1_34840 SM00972 Spore Coat Protein U domain K04M1_34870 SM00972 Spore Coat Protein U domain K04M1_34880 SM01057 Eukaryotic-type carbonic anhydrase K04M1_34950 SM00382 ATPases associated with a variety of cellular activities K04M1_34980 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K04M1_34980 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K04M1_35020 SM00587 ZnF_C4 abd HLH domain containing kinases domain K04M1_35090 SM00382 ATPases associated with a variety of cellular activities K04M1_35130 SM00267 diguanylate cyclase K04M1_35140 SM00028 Tetratricopeptide repeats K04M1_35180 SM00422 helix_turn_helix, mercury resistance K04M1_35200 SM00257 Lysin motif K04M1_35220 SM00487 DEAD-like helicases superfamily K04M1_35220 SM00490 helicase superfamily c-terminal domain K04M1_35280 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K04M1_35280 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K04M1_35320 SM00382 ATPases associated with a variety of cellular activities K04M1_35330 SM00267 diguanylate cyclase K04M1_35350 SM00327 von Willebrand factor (vWF) type A domain K04M1_35360 SM00327 von Willebrand factor (vWF) type A domain K04M1_35400 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K04M1_35400 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K04M1_35420 SM00421 helix_turn_helix, Lux Regulon K04M1_35430 SM00421 helix_turn_helix, Lux Regulon K04M1_35450 SM00382 ATPases associated with a variety of cellular activities K04M1_35500 SM00382 ATPases associated with a variety of cellular activities K04M1_35520 SM00382 ATPases associated with a variety of cellular activities K04M1_35530 SM00387 Histidine kinase-like ATPases K04M1_35530 SM00388 His Kinase A (phosphoacceptor) domain K04M1_35540 SM00448 cheY-homologous receiver domain K04M1_35540 SM00862 Transcriptional regulatory protein, C terminal K04M1_35670 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. K04M1_35670 SM00382 ATPases associated with a variety of cellular activities K04M1_35680 SM00849 Metallo-beta-lactamase superfamily K04M1_35720 SM01060 K04M1_35720 K04M1_35740 SM00829 Enoylreductase K04M1_35760 SM01022 K04M1_35760 K04M1_35880 SM00382 ATPases associated with a variety of cellular activities K04M1_35950 SM00342 helix_turn_helix, arabinose operon control protein K04M1_36100 SM00382 ATPases associated with a variety of cellular activities K04M1_36160 SM00729 Elongator protein 3, MiaB family, Radical SAM K04M1_36200 SM00260 Two component signalling adaptor domain K04M1_36200 SM00448 cheY-homologous receiver domain K04M1_36230 SM00382 ATPases associated with a variety of cellular activities K04M1_36240 SM00382 ATPases associated with a variety of cellular activities K04M1_36270 SM00420 helix_turn_helix, Deoxyribose operon repressor K04M1_36270 SM01134 K04M1_36270 K04M1_36300 SM01007 Class II Aldolase and Adducin N-terminal domain K04M1_36360 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K04M1_36360 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K04M1_36430 SM00422 helix_turn_helix, mercury resistance K04M1_36440 SM00642 Alpha-amylase domain K04M1_36450 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor K04M1_36500 SM00382 ATPases associated with a variety of cellular activities K04M1_36590 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. K04M1_36590 SM00267 diguanylate cyclase K04M1_36660 SM00926 Molybdopterin oxidoreductase Fe4S4 domain K04M1_36690 SM00382 ATPases associated with a variety of cellular activities K04M1_36720 SM01119 K04M1_36720 K04M1_36830 SM00342 helix_turn_helix, arabinose operon control protein K04M1_36850 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor K04M1_36960 SM00530 Helix-turn-helix XRE-family like proteins K04M1_37000 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K04M1_37000 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K04M1_37060 SM00052 Putative diguanylate phosphodiesterase K04M1_37060 SM00267 diguanylate cyclase K04M1_37180 SM00342 helix_turn_helix, arabinose operon control protein K04M1_37350 SM01322 K04M1_37350 K04M1_37360 SM00357 Cold shock protein domain K04M1_37380 SM00062 Bacterial periplasmic substrate-binding proteins K04M1_37380 SM00267 diguanylate cyclase K04M1_37410 SM00382 ATPases associated with a variety of cellular activities K04M1_37420 SM00382 ATPases associated with a variety of cellular activities K04M1_37440 SM00448 cheY-homologous receiver domain K04M1_37490 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K04M1_37490 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K04M1_37710 SM00487 DEAD-like helicases superfamily K04M1_37710 SM00490 helicase superfamily c-terminal domain K04M1_37750 SM00357 Cold shock protein domain K04M1_37790 SM00833 Cobalamin synthesis protein cobW C-terminal domain K04M1_37800 SM00487 DEAD-like helicases superfamily K04M1_37800 SM00490 helicase superfamily c-terminal domain K04M1_37840 SM00052 Putative diguanylate phosphodiesterase K04M1_37850 SM00382 ATPases associated with a variety of cellular activities K04M1_37860 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K04M1_37910 SM00342 helix_turn_helix, arabinose operon control protein K04M1_37920 SM00316 Ribosomal protein S1-like RNA-binding domain K04M1_37920 SM00357 Cold shock protein domain K04M1_37920 SM00955 K04M1_37920 K04M1_37930 SM00487 DEAD-like helicases superfamily K04M1_37930 SM00490 helicase superfamily c-terminal domain K04M1_38010 SM00342 helix_turn_helix, arabinose operon control protein K04M1_38090 SM00833 Cobalamin synthesis protein cobW C-terminal domain K04M1_38100 SM00833 Cobalamin synthesis protein cobW C-terminal domain K04M1_38140 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) K04M1_38140 SM00091 PAS domain K04M1_38140 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K04M1_38200 SM00422 helix_turn_helix, mercury resistance K04M1_38270 SM00822 K04M1_38270 K04M1_38440 SM00382 ATPases associated with a variety of cellular activities K04M1_38450 SM00062 Bacterial periplasmic substrate-binding proteins K04M1_38450 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. K04M1_38540 SM00893 Electron transfer flavoprotein domain K04M1_38560 SM00861 Transketolase, pyrimidine binding domain K04M1_38670 SM00448 cheY-homologous receiver domain K04M1_38670 SM00862 Transcriptional regulatory protein, C terminal K04M1_38680 SM00388 His Kinase A (phosphoacceptor) domain K04M1_38690 SM00871 Bacterial transcription activator, effector binding domain K04M1_38730 SM00028 Tetratricopeptide repeats K04M1_38730 SM00267 diguanylate cyclase K04M1_38770 SM00926 Molybdopterin oxidoreductase Fe4S4 domain K04M1_38810 SM01012 K04M1_38810 K04M1_38840 SM00382 ATPases associated with a variety of cellular activities K04M1_38910 SM00331 Sigma factor PP2C-like phosphatases K04M1_38910 SM00448 cheY-homologous receiver domain K04M1_38950 SM00220 Serine/Threonine protein kinases, catalytic domain K04M1_38960 SM00240 Forkhead associated domain K04M1_39020 SM00331 Sigma factor PP2C-like phosphatases K04M1_39020 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain K04M1_39110 SM00382 ATPases associated with a variety of cellular activities K04M1_39110 SM01086 C-terminal, D2-small domain, of ClpB protein K04M1_39250 SM00382 ATPases associated with a variety of cellular activities K04M1_39330 SM01005 Alanine racemase, C-terminal domain K04M1_39340 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K04M1_39340 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K04M1_39350 SM01311 K04M1_39350 K04M1_39390 SM00493 K04M1_39390 K04M1_39390 SM00778 Zinc-binding domain of primase-helicase K04M1_39400 SM00482 DNA polymerase A domain K04M1_39890 SM00642 Alpha-amylase domain K04M1_39920 SM00880 K04M1_39920 K04M1_39960 SM00267 diguanylate cyclase K04M1_39980 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) K04M1_39980 SM00267 diguanylate cyclase K04M1_40210 SM00387 Histidine kinase-like ATPases K04M1_40220 SM00421 helix_turn_helix, Lux Regulon K04M1_40220 SM00448 cheY-homologous receiver domain K04M1_40310 SM00450 Rhodanese Homology Domain K04M1_40320 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor K04M1_40390 SM00342 helix_turn_helix, arabinose operon control protein K04M1_40470 SM00382 ATPases associated with a variety of cellular activities K04M1_40490 SM00267 diguanylate cyclase K04M1_40490 SM00448 cheY-homologous receiver domain K04M1_40500 SM00267 diguanylate cyclase K04M1_40530 SM01002 Alanine dehydrogenase/PNT, C-terminal domain K04M1_40530 SM01003 Alanine dehydrogenase/PNT, N-terminal domain K04M1_40550 SM00387 Histidine kinase-like ATPases K04M1_40550 SM00388 His Kinase A (phosphoacceptor) domain K04M1_40560 SM00448 cheY-homologous receiver domain K04M1_40560 SM00862 Transcriptional regulatory protein, C terminal K04M1_40660 SM00369 Leucine-rich repeats, typical (most populated) subfamily K04M1_40960 SM00881 CoA binding domain K04M1_41000 SM00091 PAS domain K04M1_41000 SM00267 diguanylate cyclase K04M1_41000 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K04M1_41020 SM00796 Allophanate hydrolase subunit 1 K04M1_41030 SM00797 Allophanate hydrolase subunit 2 K04M1_41060 SM00382 ATPases associated with a variety of cellular activities K04M1_41090 SM00052 Putative diguanylate phosphodiesterase K04M1_41090 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. K04M1_41090 SM00267 diguanylate cyclase K04M1_41110 SM00271 DnaJ molecular chaperone homology domain K04M1_41240 SM00782 PhnA Zinc-Ribbon K04M1_41320 SM00116 Domain in cystathionine beta-synthase and other proteins. K04M1_41330 SM00867 YceI-like domain K04M1_41370 SM00052 Putative diguanylate phosphodiesterase K04M1_41380 SM00487 DEAD-like helicases superfamily K04M1_41380 SM00490 helicase superfamily c-terminal domain K04M1_41410 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K04M1_41480 SM00495 Chitin-binding domain type 3 K04M1_41480 SM00636 K04M1_41480 K04M1_41490 SM00342 helix_turn_helix, arabinose operon control protein K04M1_41520 SM00382 ATPases associated with a variety of cellular activities K04M1_41540 SM00062 Bacterial periplasmic substrate-binding proteins K04M1_41540 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. K04M1_41560 SM00052 Putative diguanylate phosphodiesterase K04M1_41590 SM00354 helix_turn _helix lactose operon repressor K04M1_41690 SM00530 Helix-turn-helix XRE-family like proteins K04M1_41740 SM00849 Metallo-beta-lactamase superfamily K04M1_41780 SM00342 helix_turn_helix, arabinose operon control protein K04M1_41830 SM00479 K04M1_41830 K04M1_41840 SM00382 ATPases associated with a variety of cellular activities K04M1_41900 SM00422 helix_turn_helix, mercury resistance K04M1_41970 SM00924 MgtE intracellular N domain K04M1_42050 SM00953 K04M1_42050 K04M1_42080 SM00704 CDGSH-type zinc finger. Function unknown. K04M1_42210 SM00260 Two component signalling adaptor domain K04M1_42210 SM00448 cheY-homologous receiver domain K04M1_42220 SM00421 helix_turn_helix, Lux Regulon K04M1_42220 SM00448 cheY-homologous receiver domain K04M1_42240 SM00267 diguanylate cyclase K04M1_42250 SM00421 helix_turn_helix, Lux Regulon K04M1_42250 SM00448 cheY-homologous receiver domain K04M1_42260 SM00052 Putative diguanylate phosphodiesterase K04M1_42260 SM00448 cheY-homologous receiver domain K04M1_42270 SM00062 Bacterial periplasmic substrate-binding proteins K04M1_42270 SM00387 Histidine kinase-like ATPases K04M1_42270 SM00388 His Kinase A (phosphoacceptor) domain K04M1_42270 SM00448 cheY-homologous receiver domain K04M1_42300 SM00387 Histidine kinase-like ATPases K04M1_42300 SM00448 cheY-homologous receiver domain K04M1_42370 SM00990 K04M1_42370 K04M1_42400 SM00046 Diacylglycerol kinase catalytic domain (presumed) K04M1_42440 SM00327 von Willebrand factor (vWF) type A domain K04M1_42450 SM00327 von Willebrand factor (vWF) type A domain K04M1_42530 SM00862 Transcriptional regulatory protein, C terminal K04M1_42560 SM00073 Histidine Phosphotransfer domain K04M1_42560 SM00387 Histidine kinase-like ATPases K04M1_42560 SM00388 His Kinase A (phosphoacceptor) domain K04M1_42560 SM00448 cheY-homologous receiver domain K04M1_42580 SM00851 MGS-like domain K04M1_42590 SM00862 Transcriptional regulatory protein, C terminal K04M1_42620 SM00073 Histidine Phosphotransfer domain K04M1_42620 SM00387 Histidine kinase-like ATPases K04M1_42620 SM00388 His Kinase A (phosphoacceptor) domain K04M1_42620 SM00448 cheY-homologous receiver domain K04M1_42640 SM00851 MGS-like domain K04M1_42730 SM00342 helix_turn_helix, arabinose operon control protein K04M1_42740 SM00422 helix_turn_helix, mercury resistance K04M1_42750 SM00382 ATPases associated with a variety of cellular activities K04M1_42830 SM00354 helix_turn _helix lactose operon repressor K04M1_42870 SM00382 ATPases associated with a variety of cellular activities K04M1_42890 SM00052 Putative diguanylate phosphodiesterase K04M1_42890 SM00267 diguanylate cyclase K04M1_42990 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase K04M1_43010 SM00387 Histidine kinase-like ATPases K04M1_43010 SM00388 His Kinase A (phosphoacceptor) domain K04M1_43010 SM00448 cheY-homologous receiver domain K04M1_43040 SM00244 prohibitin homologues K04M1_43070 SM00382 ATPases associated with a variety of cellular activities K04M1_43130 SM00028 Tetratricopeptide repeats K04M1_43130 SM00267 diguanylate cyclase K04M1_43140 SM00822 K04M1_43140 K04M1_43210 SM00422 helix_turn_helix, mercury resistance K04M1_43250 SM00878 Biotin carboxylase C-terminal domain K04M1_43290 SM01266 K04M1_43290 K04M1_43300 SM00345 helix_turn_helix gluconate operon transcriptional repressor K04M1_43430 SM00382 ATPases associated with a variety of cellular activities K04M1_43480 SM00382 ATPases associated with a variety of cellular activities K04M1_43500 SM00893 Electron transfer flavoprotein domain K04M1_43510 SM00893 Electron transfer flavoprotein domain K04M1_43550 SM00345 helix_turn_helix gluconate operon transcriptional repressor K04M1_43550 SM00866 K04M1_43550 K04M1_43640 SM00822 K04M1_43640 K04M1_43650 SM00347 helix_turn_helix multiple antibiotic resistance protein K04M1_43660 SM00342 helix_turn_helix, arabinose operon control protein K04M1_43760 SM00240 Forkhead associated domain K04M1_43800 SM00344 helix_turn_helix ASNC type K04M1_43870 SM00220 Serine/Threonine protein kinases, catalytic domain K04M1_43940 SM00382 ATPases associated with a variety of cellular activities K04M1_43940 SM01086 C-terminal, D2-small domain, of ClpB protein K04M1_43950 SM00382 ATPases associated with a variety of cellular activities K04M1_44030 SM00345 helix_turn_helix gluconate operon transcriptional repressor K04M1_44040 SM00736 Dystroglycan-type cadherin-like domains. K04M1_44090 SM00028 Tetratricopeptide repeats K04M1_44090 SM00530 Helix-turn-helix XRE-family like proteins K04M1_44140 SM01240 K04M1_44140 K04M1_44170 SM00448 cheY-homologous receiver domain K04M1_44240 SM00852 Probable molybdopterin binding domain K04M1_44280 SM00450 Rhodanese Homology Domain K04M1_44310 SM00861 Transketolase, pyrimidine binding domain K04M1_44320 SM00091 PAS domain K04M1_44320 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K04M1_44380 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K04M1_44450 SM00421 helix_turn_helix, Lux Regulon K04M1_44450 SM00448 cheY-homologous receiver domain K04M1_44460 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K04M1_44460 SM00387 Histidine kinase-like ATPases K04M1_44490 SM00926 Molybdopterin oxidoreductase Fe4S4 domain K04M1_44560 SM00822 K04M1_44560 K04M1_44650 SM00344 helix_turn_helix ASNC type K04M1_44700 SM00347 helix_turn_helix multiple antibiotic resistance protein K04M1_44710 SM00387 Histidine kinase-like ATPases K04M1_44710 SM00388 His Kinase A (phosphoacceptor) domain K04M1_44710 SM00448 cheY-homologous receiver domain K04M1_44730 SM00465 GIY-YIG type nucleases (URI domain) K04M1_44780 SM00387 Histidine kinase-like ATPases K04M1_44780 SM00388 His Kinase A (phosphoacceptor) domain K04M1_44780 SM00448 cheY-homologous receiver domain K04M1_44790 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain K04M1_44850 SM00344 helix_turn_helix ASNC type K04M1_44870 SM00345 helix_turn_helix gluconate operon transcriptional repressor K04M1_44890 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K04M1_44890 SM00387 Histidine kinase-like ATPases K04M1_44890 SM00388 His Kinase A (phosphoacceptor) domain K04M1_44900 SM00448 cheY-homologous receiver domain K04M1_44900 SM00862 Transcriptional regulatory protein, C terminal K04M1_44930 SM00342 helix_turn_helix, arabinose operon control protein K04M1_44970 SM00924 MgtE intracellular N domain K04M1_45000 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. K04M1_45010 SM00530 Helix-turn-helix XRE-family like proteins K04M1_45020 SM00563 Phosphate acyltransferases K04M1_45110 SM00448 cheY-homologous receiver domain K04M1_45110 SM00862 Transcriptional regulatory protein, C terminal K04M1_45120 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K04M1_45120 SM00387 Histidine kinase-like ATPases K04M1_45120 SM00388 His Kinase A (phosphoacceptor) domain K04M1_45210 SM00357 Cold shock protein domain K04M1_45270 SM00936 Penicillin-binding protein 5, C-terminal domain K04M1_45300 SM00640 Glycosyl hydrolases family 32 K04M1_45330 SM00354 helix_turn _helix lactose operon repressor K04M1_45360 SM00822 K04M1_45360 K04M1_45440 SM00342 helix_turn_helix, arabinose operon control protein K04M1_45440 SM00871 Bacterial transcription activator, effector binding domain K04M1_45490 SM00487 DEAD-like helicases superfamily K04M1_45490 SM00490 helicase superfamily c-terminal domain K04M1_45550 SM00829 Enoylreductase K04M1_45580 SM00342 helix_turn_helix, arabinose operon control protein K04M1_45590 SM00345 helix_turn_helix gluconate operon transcriptional repressor K04M1_45620 SM00344 helix_turn_helix ASNC type K04M1_45690 SM00788 Adenylosuccinate synthetase K04M1_45700 SM00870 K04M1_45700 K04M1_45740 SM00421 helix_turn_helix, Lux Regulon K04M1_45810 SM00345 helix_turn_helix gluconate operon transcriptional repressor K04M1_45810 SM00866 K04M1_45810 K04M1_45860 SM00382 ATPases associated with a variety of cellular activities K04M1_45960 SM00155 Phospholipase D. Active site motifs. K04M1_45980 SM01022 K04M1_45980 K04M1_45990 SM00028 Tetratricopeptide repeats K04M1_46010 SM00422 helix_turn_helix, mercury resistance K04M1_46050 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain K04M1_46060 SM00838 Elongation factor G C-terminus K04M1_46060 SM00889 Elongation factor G, domain IV K04M1_46130 SM00382 ATPases associated with a variety of cellular activities K04M1_46280 SM00420 helix_turn_helix, Deoxyribose operon repressor K04M1_46280 SM01134 K04M1_46280 K04M1_46340 SM00342 helix_turn_helix, arabinose operon control protein K04M1_46420 SM00883 Chaperonin 10 Kd subunit K04M1_46430 SM00450 Rhodanese Homology Domain K04M1_46460 SM01240 K04M1_46460 K04M1_46610 SM00858 K04M1_46610 K04M1_46740 SM00631 K04M1_46740 K04M1_46800 SM00345 helix_turn_helix gluconate operon transcriptional repressor K04M1_46800 SM00866 K04M1_46800 K04M1_46820 SM00382 ATPases associated with a variety of cellular activities K04M1_46880 SM00354 helix_turn _helix lactose operon repressor K04M1_46980 SM00382 ATPases associated with a variety of cellular activities K04M1_47010 SM01057 Eukaryotic-type carbonic anhydrase K04M1_47120 SM01266 K04M1_47120 K04M1_47180 SM00267 diguanylate cyclase K04M1_47200 SM00530 Helix-turn-helix XRE-family like proteins K04M1_47210 SM00267 diguanylate cyclase K04M1_47210 SM01079 K04M1_47210 K04M1_47400 SM00267 diguanylate cyclase K04M1_47410 SM00382 ATPases associated with a variety of cellular activities K04M1_47410 SM00448 cheY-homologous receiver domain K04M1_47420 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) K04M1_47420 SM00387 Histidine kinase-like ATPases K04M1_47520 SM00849 Metallo-beta-lactamase superfamily K04M1_47600 SM00382 ATPases associated with a variety of cellular activities K04M1_47740 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K04M1_47740 SM00387 Histidine kinase-like ATPases K04M1_47740 SM00388 His Kinase A (phosphoacceptor) domain K04M1_47750 SM00448 cheY-homologous receiver domain K04M1_47750 SM00862 Transcriptional regulatory protein, C terminal K04M1_47940 SM00382 ATPases associated with a variety of cellular activities K04M1_48000 SM00014 Acid phosphatase homologues K04M1_48040 SM00822 K04M1_48040 K04M1_48110 SM00345 helix_turn_helix gluconate operon transcriptional repressor K04M1_48320 SM00495 Chitin-binding domain type 3 K04M1_48330 SM00344 helix_turn_helix ASNC type K04M1_48380 SM00829 Enoylreductase K04M1_48430 SM00267 diguanylate cyclase K04M1_48470 SM00849 Metallo-beta-lactamase superfamily K04M1_48510 SM00267 diguanylate cyclase K04M1_48550 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins K04M1_48550 SM00495 Chitin-binding domain type 3 K04M1_48550 SM00636 K04M1_48550 K04M1_48650 SM00342 helix_turn_helix, arabinose operon control protein K04M1_48650 SM01009 AlkA N-terminal domain K04M1_48750 SM00345 helix_turn_helix gluconate operon transcriptional repressor K04M1_48760 SM00382 ATPases associated with a variety of cellular activities K04M1_48810 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K04M1_48810 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K04M1_48810 SM01049 K04M1_48810 K04M1_48840 SM00448 cheY-homologous receiver domain K04M1_48840 SM00850 LytTr DNA-binding domain K04M1_48850 SM00387 Histidine kinase-like ATPases K04M1_48890 SM00382 ATPases associated with a variety of cellular activities K04M1_48940 SM00387 Histidine kinase-like ATPases K04M1_48940 SM00388 His Kinase A (phosphoacceptor) domain K04M1_48940 SM00448 cheY-homologous receiver domain K04M1_48980 SM00382 ATPases associated with a variety of cellular activities K04M1_48990 SM00382 ATPases associated with a variety of cellular activities K04M1_49940 SM00400 zinc finger K04M1_50170 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain K04M1_50170 SM00437 Bacterial DNA topoisomerase I DNA-binding domain K04M1_50170 SM00493 K04M1_50170 K04M1_50380 SM00382 ATPases associated with a variety of cellular activities K04M1_50670 SM00528 Domain in histone-like proteins of HNS family K04M1_50700 SM00477 DNA/RNA non-specific endonuclease K04M1_50700 SM00892 DNA/RNA non-specific endonuclease K04M1_50750 SM00052 Putative diguanylate phosphodiesterase K04M1_50750 SM00267 diguanylate cyclase K04M1_51100 SM00974 K04M1_51100 K04M1_51220 SM00244 prohibitin homologues K04M1_51230 SM00244 prohibitin homologues K04M1_51340 SM00052 Putative diguanylate phosphodiesterase K04M1_51340 SM00267 diguanylate cyclase K04M1_51640 SM00493 K04M1_51640 K04M1_51730 SM00479 K04M1_51730